##gff-version 3 ##sequence-region bd_34x588 1 2282 bd_34x588 . repeat_region 1073 1431 . ? . description=trf bd_34x588 . repeat_region 1089 1280 . ? . description=dust bd_34x588 . repeat_region 1231 1310 . ? . description=trf bd_34x588 . repeat_region 1377 1504 . ? . description=dust bd_34x588 . repeat_region 1389 1481 . ? . description=trf bd_34x588 . repeat_region 1477 1516 . ? . description=trf ##gff-version 3 ##sequence-region bd_21x5 1 3649 bd_21x5 . repeat_region 1016 1039 . ? . description=trf bd_21x5 . repeat_region 3461 3468 . ? . description=dust bd_21x5 ensembl protein_coding_gene 53 673 . + . ID=Thapsdraft897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_21x5 ensembl transcript 53 673 . + . ID=Thapsdraft897;Parent=Thapsdraft897;biotype=protein_coding;logic_name=jgi_thaps3 bd_21x5 . CDS 53 673 . + 0 ID=Thapsdraft897;Parent=Thapsdraft897;rank=1 bd_21x5 . exon 53 673 . + . ID=Thapsdraft897.1;Parent=Thapsdraft897;constitutive=1;rank=1 bd_21x5 ensembl protein_coding_gene 1590 2486 . + . ID=Thapsdraft898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_21x5 ensembl transcript 1590 2486 . + . ID=Thapsdraft898;Parent=Thapsdraft898;biotype=protein_coding;logic_name=jgi_thaps3 bd_21x5 . CDS 1590 2486 . + 0 ID=Thapsdraft898;Parent=Thapsdraft898;rank=1 bd_21x5 . exon 1590 2486 . + . ID=Thapsdraft898.1;Parent=Thapsdraft898;constitutive=1;rank=1 bd_21x5 ensembl protein_coding_gene 2678 3627 . + . ID=Thapsdraft899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_21x5 ensembl transcript 2678 3627 . + . ID=Thapsdraft899;Parent=Thapsdraft899;biotype=protein_coding;logic_name=jgi_thaps3 bd_21x5 . CDS 2678 3061 . + 0 ID=Thapsdraft899;Parent=Thapsdraft899;rank=1 bd_21x5 . exon 2678 3061 . + . ID=Thapsdraft899.1;Parent=Thapsdraft899;constitutive=1;rank=1 bd_21x5 . CDS 3400 3627 . + 0 ID=Thapsdraft899;Parent=Thapsdraft899;rank=2 bd_21x5 . exon 3400 3627 . + . ID=Thapsdraft899.2;Parent=Thapsdraft899;constitutive=1;rank=2 ##gff-version 3 ##sequence-region bd_18x19 1 4517 bd_18x19 . repeat_region 36 187 . ? . description=trf bd_18x19 . repeat_region 1692 2422 . + . description=Copia6I_TP bd_18x19 . repeat_region 2887 3596 . + . description=PtCopiaLikeTe2 bd_18x19 . repeat_region 4465 4500 . ? . description=trf bd_18x19 ensembl protein_coding_gene 4144 4503 . + . ID=Thapsdraft1844;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEE7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_18x19 ensembl transcript 4144 4503 . + . ID=Thapsdraft1844;Parent=Thapsdraft1844;biotype=protein_coding;logic_name=jgi_thaps3 bd_18x19 . CDS 4144 4503 . + 0 ID=Thapsdraft1844;Parent=Thapsdraft1844;rank=1 bd_18x19 . exon 4144 4503 . + . ID=Thapsdraft1844.1;Parent=Thapsdraft1844;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_27x41 1 4719 bd_27x41 . repeat_region 778 826 . ? . description=dust bd_27x41 . repeat_region 966 973 . ? . description=dust bd_27x41 . repeat_region 1301 1364 . ? . description=dust bd_27x41 . repeat_region 3330 3380 . ? . description=dust bd_27x41 . repeat_region 4289 4296 . ? . description=dust bd_27x41 . repeat_region 4356 4419 . ? . description=dust bd_27x41 . repeat_region 4516 4578 . ? . description=dust bd_27x41 ensembl tRNA_gene 3437 3508 . + . ID=EPrTPOG00000000024;biotype=tRNA;description=tRNA-Asn for anticodon GUU [Source:TRNASCAN_SE%3BAcc:tRNA-Asn];external_name=tRNA-Asn;logic_name=ncrna_eg bd_27x41 ensembl transcript 3437 3508 . + . ID=EPrTPOT00000000021;Parent=EPrTPOG00000000024;biotype=tRNA;logic_name=ncrna_eg bd_27x41 . exon 3437 3508 . + . ID=EPrTPOE00000000024;Parent=EPrTPOT00000000021;constitutive=1;rank=1 bd_27x41 ensembl protein_coding_gene 1420 1665 . - . ID=Thapsdraft1048;biotype=protein_coding;description=Photosystem I iron-sulfur center [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0W4];external_name=PSAC;logic_name=jgi_thaps3 bd_27x41 ensembl transcript 1420 1665 . - . ID=Thapsdraft1048;Parent=Thapsdraft1048;biotype=protein_coding;logic_name=jgi_thaps3 bd_27x41 . CDS 1420 1665 . - 0 ID=Thapsdraft1048;Parent=Thapsdraft1048;rank=1 bd_27x41 . exon 1420 1665 . - . ID=Thapsdraft1048.1;Parent=Thapsdraft1048;constitutive=1;rank=1 bd_27x41 ensembl protein_coding_gene 875 1282 . + . ID=Thapsdraft1439;biotype=protein_coding;description=Predicted proteinPutative uncharacterized protein ycf35Putative uncharacterized protein ycf35' [Source:UniProtKB/TrEMBL%3BAcc:A0T0W3];external_name=YCF35;logic_name=jgi_thaps3 bd_27x41 ensembl transcript 875 1282 . + . ID=Thapsdraft1439;Parent=Thapsdraft1439;biotype=protein_coding;logic_name=jgi_thaps3 bd_27x41 . CDS 875 1282 . + 0 ID=Thapsdraft1439;Parent=Thapsdraft1439;rank=1 bd_27x41 . exon 875 1282 . + . ID=Thapsdraft1439.1;Parent=Thapsdraft1439;constitutive=1;rank=1 bd_27x41 ensembl protein_coding_gene 1745 2722 . - . ID=Thapsdraft1441;biotype=protein_coding;description=Cytochrome c biogenesis protein CcsA [Source:UniProtKB/TrEMBL%3BAcc:A0T0W5];external_name=CCSA;logic_name=jgi_thaps3 bd_27x41 ensembl transcript 1745 2722 . - . ID=Thapsdraft1441;Parent=Thapsdraft1441;biotype=protein_coding;logic_name=jgi_thaps3 bd_27x41 . CDS 1745 2722 . - 0 ID=Thapsdraft1441;Parent=Thapsdraft1441;rank=1 bd_27x41 . exon 1745 2722 . - . ID=Thapsdraft1441.1;Parent=Thapsdraft1441;constitutive=1;rank=1 bd_27x41 ensembl protein_coding_gene 3060 3371 . + . ID=Thapsdraft1447;biotype=protein_coding;description=30S ribosomal protein S6%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T104];external_name=RPS6;logic_name=jgi_thaps3 bd_27x41 ensembl transcript 3060 3371 . + . ID=Thapsdraft1447;Parent=Thapsdraft1447;biotype=protein_coding;logic_name=jgi_thaps3 bd_27x41 . CDS 3060 3371 . + 0 ID=Thapsdraft1447;Parent=Thapsdraft1447;rank=1 bd_27x41 . exon 3060 3371 . + . ID=Thapsdraft1447.1;Parent=Thapsdraft1447;constitutive=1;rank=1 bd_27x41 ensembl protein_coding_gene 3538 4347 . + . ID=Thapsdraft1620;biotype=protein_coding;description=Thiazole synthase [Source:UniProtKB/Swiss-Prot%3BAcc:A0T103];external_name=THIG;logic_name=jgi_thaps3 bd_27x41 ensembl transcript 3538 4347 . + . ID=Thapsdraft1620;Parent=Thapsdraft1620;biotype=protein_coding;logic_name=jgi_thaps3 bd_27x41 . CDS 3538 4347 . + 0 ID=Thapsdraft1620;Parent=Thapsdraft1620;rank=1 bd_27x41 . exon 3538 4347 . + . ID=Thapsdraft1620.1;Parent=Thapsdraft1620;constitutive=1;rank=1 bd_27x41 ensembl protein_coding_gene 91 661 . + . ID=Thapsdraft1736;biotype=protein_coding;description=Photosystem Q(B) protein [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0W2];external_name=PSBA;logic_name=jgi_thaps3 bd_27x41 ensembl transcript 91 661 . + . ID=Thapsdraft1736;Parent=Thapsdraft1736;biotype=protein_coding;logic_name=jgi_thaps3 bd_27x41 . CDS 91 422 . + 0 ID=Thapsdraft1736;Parent=Thapsdraft1736;rank=1 bd_27x41 . exon 91 422 . + . ID=Thapsdraft1736.1;Parent=Thapsdraft1736;constitutive=1;ensembl_end_phase=2;rank=1 bd_27x41 . CDS 451 661 . + 0 ID=Thapsdraft1736;Parent=Thapsdraft1736;rank=2 bd_27x41 . exon 451 661 . + . ID=Thapsdraft1736.2;Parent=Thapsdraft1736;constitutive=1;ensembl_end_phase=1;rank=2 ##gff-version 3 ##sequence-region bd_31x227 1 5155 bd_31x227 . repeat_region 1756 2187 . ? . description=dust bd_31x227 . repeat_region 2778 2828 . ? . description=dust bd_31x227 . repeat_region 2782 2828 . ? . description=trf bd_31x227 . repeat_region 2831 2955 . ? . description=trf bd_31x227 . repeat_region 2831 2955 . ? . description=trf bd_31x227 . repeat_region 2831 2955 . ? . description=trf bd_31x227 . repeat_region 2831 2956 . ? . description=trf bd_31x227 . repeat_region 2844 2955 . ? . description=trf bd_31x227 . repeat_region 2871 2965 . ? . description=dust bd_31x227 . repeat_region 2999 3037 . ? . description=trf bd_31x227 . repeat_region 3667 3743 . ? . description=dust bd_31x227 ensembl protein_coding_gene 46 554 . - . ID=Thapsdraft1062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEW2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_31x227 ensembl transcript 46 554 . - . ID=Thapsdraft1062;Parent=Thapsdraft1062;biotype=protein_coding;logic_name=jgi_thaps3 bd_31x227 . CDS 46 554 . - 0 ID=Thapsdraft1062;Parent=Thapsdraft1062;rank=1 bd_31x227 . exon 46 554 . - . ID=Thapsdraft1062.1;Parent=Thapsdraft1062;constitutive=1;ensembl_end_phase=2;rank=1 bd_31x227 ensembl protein_coding_gene 768 1244 . + . ID=Thapsdraft1939;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEW3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_31x227 ensembl transcript 768 1244 . + . ID=Thapsdraft1939;Parent=Thapsdraft1939;biotype=protein_coding;logic_name=jgi_thaps3 bd_31x227 . CDS 768 1244 . + 0 ID=Thapsdraft1939;Parent=Thapsdraft1939;rank=1 bd_31x227 . exon 768 1244 . + . ID=Thapsdraft1939.1;Parent=Thapsdraft1939;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_25x33 1 6404 bd_25x33 . repeat_region 542 564 . ? . description=dust bd_25x33 . repeat_region 2424 2437 . ? . description=dust bd_25x33 . repeat_region 4799 4818 . ? . description=trf bd_25x33 ensembl protein_coding_gene 60 2139 . + . ID=Thapsdraft954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEP8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_25x33 ensembl transcript 60 2139 . + . ID=Thapsdraft954;Parent=Thapsdraft954;biotype=protein_coding;logic_name=jgi_thaps3 bd_25x33 . CDS 60 449 . + 0 ID=Thapsdraft954;Parent=Thapsdraft954;rank=1 bd_25x33 . exon 60 449 . + . ID=Thapsdraft954.1;Parent=Thapsdraft954;constitutive=1;rank=1 bd_25x33 . CDS 634 884 . + 0 ID=Thapsdraft954;Parent=Thapsdraft954;rank=2 bd_25x33 . exon 634 884 . + . ID=Thapsdraft954.2;Parent=Thapsdraft954;constitutive=1;ensembl_end_phase=2;rank=2 bd_25x33 . CDS 984 1839 . + 0 ID=Thapsdraft954;Parent=Thapsdraft954;rank=3 bd_25x33 . exon 984 1839 . + . ID=Thapsdraft954.3;Parent=Thapsdraft954;constitutive=1;ensembl_end_phase=1;rank=3 bd_25x33 . CDS 1993 2139 . + 0 ID=Thapsdraft954;Parent=Thapsdraft954;rank=4 bd_25x33 . exon 1993 2139 . + . ID=Thapsdraft954.4;Parent=Thapsdraft954;constitutive=1;rank=4 bd_25x33 ensembl protein_coding_gene 5845 6267 . + . ID=Thapsdraft955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEP7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_25x33 ensembl transcript 5845 6267 . + . ID=Thapsdraft955;Parent=Thapsdraft955;biotype=protein_coding;logic_name=jgi_thaps3 bd_25x33 . CDS 5845 6267 . + 0 ID=Thapsdraft955;Parent=Thapsdraft955;rank=1 bd_25x33 . exon 5845 6267 . + . ID=Thapsdraft955.1;Parent=Thapsdraft955;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_30x155 1 8090 bd_30x155 . biological_region 3590 3594 0.999 - . logic_name=eponine bd_30x155 . repeat_region 6460 7125 . ? . description=dust bd_30x155 ensembl protein_coding_gene 101 2497 . - . ID=Thapsdraft1449;biotype=protein_coding;description=GTP pyrophosphokinase [Source:UniProtKB/TrEMBL%3BAcc:B8LEV9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_30x155 ensembl transcript 101 2497 . - . ID=Thapsdraft1449;Parent=Thapsdraft1449;biotype=protein_coding;logic_name=jgi_thaps3 bd_30x155 . CDS 101 423 . - 0 ID=Thapsdraft1449;Parent=Thapsdraft1449;rank=2 bd_30x155 . exon 101 423 . - . ID=Thapsdraft1449.2;Parent=Thapsdraft1449;constitutive=1;ensembl_end_phase=2;rank=2 bd_30x155 . CDS 505 2497 . - 0 ID=Thapsdraft1449;Parent=Thapsdraft1449;rank=1 bd_30x155 . exon 505 2497 . - . ID=Thapsdraft1449.1;Parent=Thapsdraft1449;constitutive=1;ensembl_end_phase=1;rank=1 bd_30x155 ensembl protein_coding_gene 4514 5082 . + . ID=Thapsdraft1689;biotype=protein_coding;description=Short chain dehyrogenase/reductase [Source:UniProtKB/TrEMBL%3BAcc:B8LEW0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_30x155 ensembl transcript 4514 5082 . + . ID=Thapsdraft1689;Parent=Thapsdraft1689;biotype=protein_coding;logic_name=jgi_thaps3 bd_30x155 . CDS 4514 4577 . + 0 ID=Thapsdraft1689;Parent=Thapsdraft1689;rank=1 bd_30x155 . exon 4514 4577 . + . ID=Thapsdraft1689.1;Parent=Thapsdraft1689;constitutive=1;ensembl_end_phase=1;rank=1 bd_30x155 . CDS 4703 5082 . + 0 ID=Thapsdraft1689;Parent=Thapsdraft1689;rank=2 bd_30x155 . exon 4703 5082 . + . ID=Thapsdraft1689.2;Parent=Thapsdraft1689;constitutive=1;ensembl_end_phase=2;rank=2 bd_30x155 ensembl protein_coding_gene 5132 7877 . + . ID=Thapsdraft1938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEW1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_30x155 ensembl transcript 5132 7877 . + . ID=Thapsdraft1938;Parent=Thapsdraft1938;biotype=protein_coding;logic_name=jgi_thaps3 bd_30x155 . CDS 5132 5417 . + 0 ID=Thapsdraft1938;Parent=Thapsdraft1938;rank=1 bd_30x155 . exon 5132 5417 . + . ID=Thapsdraft1938.1;Parent=Thapsdraft1938;constitutive=1;ensembl_end_phase=1;rank=1 bd_30x155 . CDS 5505 6433 . + 0 ID=Thapsdraft1938;Parent=Thapsdraft1938;rank=2 bd_30x155 . exon 5505 6433 . + . ID=Thapsdraft1938.2;Parent=Thapsdraft1938;constitutive=1;ensembl_end_phase=2;rank=2 bd_30x155 . CDS 7172 7283 . + 0 ID=Thapsdraft1938;Parent=Thapsdraft1938;rank=3 bd_30x155 . exon 7172 7283 . + . ID=Thapsdraft1938.3;Parent=Thapsdraft1938;constitutive=1;ensembl_end_phase=1;rank=3 bd_30x155 . CDS 7366 7577 . + 0 ID=Thapsdraft1938;Parent=Thapsdraft1938;rank=4 bd_30x155 . exon 7366 7577 . + . ID=Thapsdraft1938.4;Parent=Thapsdraft1938;constitutive=1;ensembl_end_phase=2;rank=4 bd_30x155 . CDS 7677 7877 . + 0 ID=Thapsdraft1938;Parent=Thapsdraft1938;rank=5 bd_30x155 . exon 7677 7877 . + . ID=Thapsdraft1938.5;Parent=Thapsdraft1938;constitutive=1;rank=5 ##gff-version 3 ##sequence-region bd_29x110 1 10555 bd_29x110 . repeat_region 1338 1388 . ? . description=trf bd_29x110 . repeat_region 1422 1461 . ? . description=trf bd_29x110 . repeat_region 1793 2497 . - . description=TE2c_TP bd_29x110 . repeat_region 2941 2973 . + . description=Gypsy1ALTR_TP bd_29x110 . repeat_region 2974 3953 . + . description=Gypsy1I_TP bd_29x110 . repeat_region 3951 4367 . + . description=Gypsy1I_TP bd_29x110 . repeat_region 4365 5266 . + . description=Gypsy1I_TP bd_29x110 . repeat_region 4579 4654 . ? . description=trf bd_29x110 . repeat_region 5268 5397 . + . description=TE2c_TP bd_29x110 ensembl protein_coding_gene 198 1307 . + . ID=Thapsdraft1056;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEV6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_29x110 ensembl transcript 198 1307 . + . ID=Thapsdraft1056;Parent=Thapsdraft1056;biotype=protein_coding;logic_name=jgi_thaps3 bd_29x110 . CDS 198 1307 . + 0 ID=Thapsdraft1056;Parent=Thapsdraft1056;rank=1 bd_29x110 . exon 198 1307 . + . ID=Thapsdraft1056.1;Parent=Thapsdraft1056;constitutive=1;rank=1 bd_29x110 . repeat_region 5309 5986 . - . description=TE2_TP bd_29x110 . repeat_region 6732 7177 . - . description=TE2_TP bd_29x110 ensembl protein_coding_gene 9564 10187 . - . ID=Thapsdraft1058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEV8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_29x110 ensembl transcript 9564 10187 . - . ID=Thapsdraft1058;Parent=Thapsdraft1058;biotype=protein_coding;logic_name=jgi_thaps3 bd_29x110 . CDS 9564 10187 . - 0 ID=Thapsdraft1058;Parent=Thapsdraft1058;rank=1 bd_29x110 . exon 9564 10187 . - . ID=Thapsdraft1058.1;Parent=Thapsdraft1058;constitutive=1;rank=1 bd_29x110 ensembl protein_coding_gene 8041 9196 . + . ID=Thapsdraft1935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEV7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_29x110 ensembl transcript 8041 9196 . + . ID=Thapsdraft1935;Parent=Thapsdraft1935;biotype=protein_coding;logic_name=jgi_thaps3 bd_29x110 . CDS 8041 8374 . + 0 ID=Thapsdraft1935;Parent=Thapsdraft1935;rank=1 bd_29x110 . exon 8041 8374 . + . ID=Thapsdraft1935.1;Parent=Thapsdraft1935;constitutive=1;ensembl_end_phase=1;rank=1 bd_29x110 . CDS 8472 8577 . + 0 ID=Thapsdraft1935;Parent=Thapsdraft1935;rank=2 bd_29x110 . exon 8472 8577 . + . ID=Thapsdraft1935.2;Parent=Thapsdraft1935;constitutive=1;ensembl_end_phase=1;rank=2 bd_29x110 . CDS 8656 9196 . + 0 ID=Thapsdraft1935;Parent=Thapsdraft1935;rank=3 bd_29x110 . exon 8656 9196 . + . ID=Thapsdraft1935.3;Parent=Thapsdraft1935;constitutive=1;ensembl_end_phase=1;rank=3 ##gff-version 3 ##sequence-region bd_28x107 1 11026 bd_28x107 . repeat_region 2778 5148 . ? . description=dust bd_28x107 . repeat_region 5149 5386 . - . description=Harbinger3_TP bd_28x107 ensembl protein_coding_gene 5621 7824 . - . ID=Thapsdraft1934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEV5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_28x107 ensembl transcript 5621 7824 . - . ID=Thapsdraft1934;Parent=Thapsdraft1934;biotype=protein_coding;logic_name=jgi_thaps3 bd_28x107 . CDS 5621 7063 . - 0 ID=Thapsdraft1934;Parent=Thapsdraft1934;rank=2 bd_28x107 . exon 5621 7063 . - . ID=Thapsdraft1934.2;Parent=Thapsdraft1934;constitutive=1;rank=2 bd_28x107 . CDS 7168 7824 . - 0 ID=Thapsdraft1934;Parent=Thapsdraft1934;rank=1 bd_28x107 . exon 7168 7824 . - . ID=Thapsdraft1934.1;Parent=Thapsdraft1934;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_4x130 1 11697 bd_4x130 ensembl protein_coding_gene 839 3080 . + . ID=Thapsdraft1753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_4x130 ensembl transcript 839 3080 . + . ID=Thapsdraft1753;Parent=Thapsdraft1753;biotype=protein_coding;logic_name=jgi_thaps3 bd_4x130 . CDS 839 880 . + 0 ID=Thapsdraft1753;Parent=Thapsdraft1753;rank=1 bd_4x130 . exon 839 880 . + . ID=Thapsdraft1753.1;Parent=Thapsdraft1753;constitutive=1;rank=1 bd_4x130 . CDS 1168 1251 . + 0 ID=Thapsdraft1753;Parent=Thapsdraft1753;rank=2 bd_4x130 . exon 1168 1251 . + . ID=Thapsdraft1753.2;Parent=Thapsdraft1753;constitutive=1;rank=2 bd_4x130 . CDS 1322 2971 . + 0 ID=Thapsdraft1753;Parent=Thapsdraft1753;rank=3 bd_4x130 . exon 1322 2971 . + . ID=Thapsdraft1753.3;Parent=Thapsdraft1753;constitutive=1;rank=3 bd_4x130 . CDS 3027 3080 . + 0 ID=Thapsdraft1753;Parent=Thapsdraft1753;rank=4 bd_4x130 . exon 3027 3080 . + . ID=Thapsdraft1753.4;Parent=Thapsdraft1753;constitutive=1;rank=4 bd_4x130 ensembl gene 3224 5618 . + . ID=Thapsdraft388;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 bd_4x130 ensembl transcript 3224 5618 . + . ID=Thapsdraft388;Parent=Thapsdraft388;biotype=nontranslating_CDS;logic_name=jgi_thaps3 bd_4x130 . exon 3224 4986 . + . ID=Thapsdraft388.1;Parent=Thapsdraft388;constitutive=1;ensembl_end_phase=2;rank=1 bd_4x130 . exon 5031 5065 . + . ID=Thapsdraft388.2;Parent=Thapsdraft388;constitutive=1;ensembl_end_phase=2;rank=2 bd_4x130 . exon 5146 5249 . + . ID=Thapsdraft388.3;Parent=Thapsdraft388;constitutive=1;ensembl_end_phase=2;rank=3 bd_4x130 . exon 5302 5387 . + . ID=Thapsdraft388.4;Parent=Thapsdraft388;constitutive=1;ensembl_end_phase=2;rank=4 bd_4x130 . exon 5491 5618 . + . ID=Thapsdraft388.5;Parent=Thapsdraft388;constitutive=1;ensembl_end_phase=2;rank=5 bd_4x130 ensembl protein_coding_gene 5807 6484 . + . ID=Thapsdraft643;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_4x130 ensembl transcript 5807 6484 . + . ID=Thapsdraft643;Parent=Thapsdraft643;biotype=protein_coding;logic_name=jgi_thaps3 bd_4x130 . CDS 5807 6484 . + 0 ID=Thapsdraft643;Parent=Thapsdraft643;rank=1 bd_4x130 . exon 5807 6484 . + . ID=Thapsdraft643.1;Parent=Thapsdraft643;constitutive=1;rank=1 bd_4x130 . repeat_region 8511 8658 . ? . description=trf bd_4x130 . repeat_region 8511 8696 . ? . description=trf bd_4x130 . repeat_region 8546 8695 . ? . description=trf bd_4x130 . repeat_region 8777 8910 . ? . description=trf bd_4x130 . repeat_region 8816 8926 . ? . description=dust bd_4x130 . repeat_region 10720 10851 . - . description=Harbinger2N_TP bd_4x130 . repeat_region 10722 10772 . ? . description=dust bd_4x130 . repeat_region 10725 10772 . ? . description=trf bd_4x130 . repeat_region 10852 11168 . ? . description=dust bd_4x130 . repeat_region 10852 11274 . - . description=Harbinger2N_TP bd_4x130 . repeat_region 10862 11069 . ? . description=trf bd_4x130 . repeat_region 10864 11167 . ? . description=trf bd_4x130 . repeat_region 11066 11232 . ? . description=trf bd_4x130 . repeat_region 11091 11201 . ? . description=trf bd_4x130 . repeat_region 11184 11243 . ? . description=trf bd_4x130 . repeat_region 11184 11249 . ? . description=trf bd_4x130 . repeat_region 11201 11264 . ? . description=dust ##gff-version 3 ##sequence-region bd_17x19 1 11801 bd_17x19 . repeat_region 1497 1720 . ? . description=trf bd_17x19 . repeat_region 2215 2236 . ? . description=dust bd_17x19 . repeat_region 3545 3644 . ? . description=trf bd_17x19 . repeat_region 3662 4580 . - . description=Harbinger3_TP bd_17x19 ensembl protein_coding_gene 357 785 . - . ID=Thapsdraft827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEE4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_17x19 ensembl transcript 357 785 . - . ID=Thapsdraft827;Parent=Thapsdraft827;biotype=protein_coding;logic_name=jgi_thaps3 bd_17x19 . CDS 357 785 . - 0 ID=Thapsdraft827;Parent=Thapsdraft827;rank=1 bd_17x19 . exon 357 785 . - . ID=Thapsdraft827.1;Parent=Thapsdraft827;constitutive=1;rank=1 bd_17x19 ensembl protein_coding_gene 4694 6505 . + . ID=Thapsdraft828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT83];external_name=Thaps24712;logic_name=jgi_thaps3 bd_17x19 ensembl transcript 4694 6505 . + . ID=Thapsdraft828;Parent=Thapsdraft828;biotype=protein_coding;logic_name=jgi_thaps3 bd_17x19 . CDS 4694 6505 . + 0 ID=Thapsdraft828;Parent=Thapsdraft828;rank=1 bd_17x19 . exon 4694 6505 . + . ID=Thapsdraft828.1;Parent=Thapsdraft828;constitutive=1;rank=1 bd_17x19 ensembl protein_coding_gene 9579 11750 . - . ID=Thapsdraft1842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEE6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_17x19 ensembl transcript 9579 11750 . - . ID=Thapsdraft1842;Parent=Thapsdraft1842;biotype=protein_coding;logic_name=jgi_thaps3 bd_17x19 . CDS 9579 9947 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=11 bd_17x19 . exon 9579 9947 . - . ID=Thapsdraft1842.11;Parent=Thapsdraft1842;constitutive=1;rank=11 bd_17x19 . CDS 10034 10044 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=10 bd_17x19 . exon 10034 10044 . - . ID=Thapsdraft1842.10;Parent=Thapsdraft1842;constitutive=1;ensembl_end_phase=2;rank=10 bd_17x19 . CDS 10135 10282 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=9 bd_17x19 . exon 10135 10282 . - . ID=Thapsdraft1842.9;Parent=Thapsdraft1842;constitutive=1;ensembl_end_phase=1;rank=9 bd_17x19 . CDS 10370 10562 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=8 bd_17x19 . exon 10370 10562 . - . ID=Thapsdraft1842.8;Parent=Thapsdraft1842;constitutive=1;ensembl_end_phase=1;rank=8 bd_17x19 . CDS 10639 10665 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=7 bd_17x19 . exon 10639 10665 . - . ID=Thapsdraft1842.7;Parent=Thapsdraft1842;constitutive=1;rank=7 bd_17x19 . CDS 10747 10773 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=6 bd_17x19 . exon 10747 10773 . - . ID=Thapsdraft1842.6;Parent=Thapsdraft1842;constitutive=1;rank=6 bd_17x19 . CDS 10853 10887 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=5 bd_17x19 . exon 10853 10887 . - . ID=Thapsdraft1842.5;Parent=Thapsdraft1842;constitutive=1;ensembl_end_phase=2;rank=5 bd_17x19 . CDS 10983 11216 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=4 bd_17x19 . exon 10983 11216 . - . ID=Thapsdraft1842.4;Parent=Thapsdraft1842;constitutive=1;rank=4 bd_17x19 . CDS 11312 11325 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=3 bd_17x19 . exon 11312 11325 . - . ID=Thapsdraft1842.3;Parent=Thapsdraft1842;constitutive=1;ensembl_end_phase=2;rank=3 bd_17x19 . CDS 11422 11498 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=2 bd_17x19 . exon 11422 11498 . - . ID=Thapsdraft1842.2;Parent=Thapsdraft1842;constitutive=1;ensembl_end_phase=2;rank=2 bd_17x19 . CDS 11569 11750 . - 0 ID=Thapsdraft1842;Parent=Thapsdraft1842;rank=1 bd_17x19 . exon 11569 11750 . - . ID=Thapsdraft1842.1;Parent=Thapsdraft1842;constitutive=1;ensembl_end_phase=2;rank=1 ##gff-version 3 ##sequence-region bd_12x85 1 13470 bd_12x85 . repeat_region 1 64 . ? . description=trf bd_12x85 . repeat_region 1 64 . ? . description=dust bd_12x85 . repeat_region 1085 1113 . ? . description=dust bd_12x85 . repeat_region 1086 1106 . ? . description=trf bd_12x85 . repeat_region 1641 1700 . ? . description=dust bd_12x85 ensembl protein_coding_gene 315 5823 . + . ID=Thapsdraft1811;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE93];external_name=Thaps24712;logic_name=jgi_thaps3 bd_12x85 ensembl transcript 315 5823 . + . ID=Thapsdraft1811;Parent=Thapsdraft1811;biotype=protein_coding;logic_name=jgi_thaps3 bd_12x85 . CDS 315 3532 . + 0 ID=Thapsdraft1811;Parent=Thapsdraft1811;rank=1 bd_12x85 . exon 315 3532 . + . ID=Thapsdraft1811.1;Parent=Thapsdraft1811;constitutive=1;ensembl_end_phase=2;rank=1 bd_12x85 . CDS 3608 3873 . + 0 ID=Thapsdraft1811;Parent=Thapsdraft1811;rank=2 bd_12x85 . exon 3608 3873 . + . ID=Thapsdraft1811.2;Parent=Thapsdraft1811;constitutive=1;ensembl_end_phase=2;rank=2 bd_12x85 . CDS 3936 3986 . + 0 ID=Thapsdraft1811;Parent=Thapsdraft1811;rank=3 bd_12x85 . exon 3936 3986 . + . ID=Thapsdraft1811.3;Parent=Thapsdraft1811;constitutive=1;rank=3 bd_12x85 . CDS 4057 4466 . + 0 ID=Thapsdraft1811;Parent=Thapsdraft1811;rank=4 bd_12x85 . exon 4057 4466 . + . ID=Thapsdraft1811.4;Parent=Thapsdraft1811;constitutive=1;ensembl_end_phase=2;rank=4 bd_12x85 . CDS 4557 5246 . + 0 ID=Thapsdraft1811;Parent=Thapsdraft1811;rank=5 bd_12x85 . exon 4557 5246 . + . ID=Thapsdraft1811.5;Parent=Thapsdraft1811;constitutive=1;rank=5 bd_12x85 . CDS 5347 5823 . + 0 ID=Thapsdraft1811;Parent=Thapsdraft1811;rank=6 bd_12x85 . exon 5347 5823 . + . ID=Thapsdraft1811.6;Parent=Thapsdraft1811;constitutive=1;rank=6 bd_12x85 . repeat_region 10653 10856 . + . description=TE2c_TP bd_12x85 . repeat_region 10763 10879 . - . description=TE2c_TP bd_12x85 ensembl gene 7638 7832 . - . ID=Thapsdraft763;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 bd_12x85 ensembl transcript 7638 7832 . - . ID=Thapsdraft763;Parent=Thapsdraft763;biotype=nontranslating_CDS;logic_name=jgi_thaps3 bd_12x85 . exon 7638 7832 . - . ID=Thapsdraft763.1;Parent=Thapsdraft763;constitutive=1;rank=1 bd_12x85 ensembl protein_coding_gene 11192 13441 . + . ID=Thapsdraft764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE94];external_name=Thaps24712;logic_name=jgi_thaps3 bd_12x85 ensembl transcript 11192 13441 . + . ID=Thapsdraft764;Parent=Thapsdraft764;biotype=protein_coding;logic_name=jgi_thaps3 bd_12x85 . CDS 11192 12161 . + 0 ID=Thapsdraft764;Parent=Thapsdraft764;rank=1 bd_12x85 . exon 11192 12161 . + . ID=Thapsdraft764.1;Parent=Thapsdraft764;constitutive=1;ensembl_end_phase=1;rank=1 bd_12x85 . CDS 12289 12660 . + 0 ID=Thapsdraft764;Parent=Thapsdraft764;rank=2 bd_12x85 . exon 12289 12660 . + . ID=Thapsdraft764.2;Parent=Thapsdraft764;constitutive=1;rank=2 bd_12x85 . CDS 12750 13441 . + 0 ID=Thapsdraft764;Parent=Thapsdraft764;rank=3 bd_12x85 . exon 12750 13441 . + . ID=Thapsdraft764.3;Parent=Thapsdraft764;constitutive=1;ensembl_end_phase=2;rank=3 ##gff-version 3 ##sequence-region bd_37x91 1 13833 bd_37x91 . repeat_region 1544 1840 . ? . description=dust bd_37x91 . repeat_region 3557 3564 . ? . description=dust bd_37x91 ensembl protein_coding_gene 2580 3557 . - . ID=Thapsdraft1959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_37x91 ensembl transcript 2580 3557 . - . ID=Thapsdraft1959;Parent=Thapsdraft1959;biotype=protein_coding;logic_name=jgi_thaps3 bd_37x91 . CDS 2580 3557 . - 0 ID=Thapsdraft1959;Parent=Thapsdraft1959;rank=1 bd_37x91 . exon 2580 3557 . - . ID=Thapsdraft1959.1;Parent=Thapsdraft1959;constitutive=1;rank=1 bd_37x91 ensembl protein_coding_gene 4181 4888 . + . ID=Thapsdraft1961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_37x91 ensembl transcript 4181 4888 . + . ID=Thapsdraft1961;Parent=Thapsdraft1961;biotype=protein_coding;logic_name=jgi_thaps3 bd_37x91 . CDS 4181 4888 . + 0 ID=Thapsdraft1961;Parent=Thapsdraft1961;rank=1 bd_37x91 . exon 4181 4888 . + . ID=Thapsdraft1961.1;Parent=Thapsdraft1961;constitutive=1;rank=1 bd_37x91 ensembl protein_coding_gene 10660 11394 . - . ID=Thapsdraft1109;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_37x91 ensembl transcript 10660 11394 . - . ID=Thapsdraft1109;Parent=Thapsdraft1109;biotype=protein_coding;logic_name=jgi_thaps3 bd_37x91 . CDS 10660 11394 . - 0 ID=Thapsdraft1109;Parent=Thapsdraft1109;rank=1 bd_37x91 . exon 10660 11394 . - . ID=Thapsdraft1109.1;Parent=Thapsdraft1109;constitutive=1;rank=1 bd_37x91 ensembl protein_coding_gene 12056 12208 . + . ID=Thapsdraft1472;biotype=protein_coding;description=50S ribosomal protein L33 [Source:UniProtKB/TrEMBL%3BAcc:B8LF00];external_name=RM33;logic_name=jgi_thaps3 bd_37x91 ensembl transcript 12056 12208 . + . ID=Thapsdraft1472;Parent=Thapsdraft1472;biotype=protein_coding;logic_name=jgi_thaps3 bd_37x91 . CDS 12056 12208 . + 0 ID=Thapsdraft1472;Parent=Thapsdraft1472;rank=1 bd_37x91 . exon 12056 12208 . + . ID=Thapsdraft1472.1;Parent=Thapsdraft1472;constitutive=1;rank=1 bd_37x91 ensembl protein_coding_gene 12475 13831 . - . ID=Thapsdraft1474;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LF01];external_name=Thaps24712;logic_name=jgi_thaps3 bd_37x91 ensembl transcript 12475 13831 . - . ID=Thapsdraft1474;Parent=Thapsdraft1474;biotype=protein_coding;logic_name=jgi_thaps3 bd_37x91 . CDS 12475 12821 . - 0 ID=Thapsdraft1474;Parent=Thapsdraft1474;rank=2 bd_37x91 . exon 12475 12821 . - . ID=Thapsdraft1474.2;Parent=Thapsdraft1474;constitutive=1;ensembl_end_phase=2;rank=2 bd_37x91 . CDS 12904 13831 . - 0 ID=Thapsdraft1474;Parent=Thapsdraft1474;rank=1 bd_37x91 . exon 12904 13831 . - . ID=Thapsdraft1474.1;Parent=Thapsdraft1474;constitutive=1;ensembl_end_phase=1;rank=1 bd_37x91 ensembl protein_coding_gene 7286 8432 . + . ID=Thapsdraft521;biotype=protein_coding;description=Pol polyprotein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_37x91 ensembl transcript 7286 8432 . + . ID=Thapsdraft521;Parent=Thapsdraft521;biotype=protein_coding;logic_name=jgi_thaps3 bd_37x91 . CDS 7286 7325 . + 0 ID=Thapsdraft521;Parent=Thapsdraft521;rank=1 bd_37x91 . exon 7286 7325 . + . ID=Thapsdraft521.1;Parent=Thapsdraft521;constitutive=1;ensembl_end_phase=1;rank=1 bd_37x91 . CDS 7337 8432 . + 0 ID=Thapsdraft521;Parent=Thapsdraft521;rank=2 bd_37x91 . exon 7337 8432 . + . ID=Thapsdraft521.2;Parent=Thapsdraft521;constitutive=1;ensembl_end_phase=1;rank=2 ##gff-version 3 ##sequence-region bd_3x105 1 14394 bd_3x105 ensembl protein_coding_gene 928 3039 . + . ID=Thapsdraft634;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_3x105 ensembl transcript 928 3039 . + . ID=Thapsdraft634;Parent=Thapsdraft634;biotype=protein_coding;logic_name=jgi_thaps3 bd_3x105 . CDS 928 3039 . + 0 ID=Thapsdraft634;Parent=Thapsdraft634;rank=1 bd_3x105 . exon 928 3039 . + . ID=Thapsdraft634.1;Parent=Thapsdraft634;constitutive=1;rank=1 bd_3x105 ensembl protein_coding_gene 3211 6718 . - . ID=Thapsdraft635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_3x105 ensembl transcript 3211 6718 . - . ID=Thapsdraft635;Parent=Thapsdraft635;biotype=protein_coding;logic_name=jgi_thaps3 bd_3x105 . CDS 3211 4383 . - 0 ID=Thapsdraft635;Parent=Thapsdraft635;rank=6 bd_3x105 . exon 3211 4383 . - . ID=Thapsdraft635.6;Parent=Thapsdraft635;constitutive=1;rank=6 bd_3x105 . CDS 4429 5115 . - 0 ID=Thapsdraft635;Parent=Thapsdraft635;rank=5 bd_3x105 . exon 4429 5115 . - . ID=Thapsdraft635.5;Parent=Thapsdraft635;constitutive=1;rank=5 bd_3x105 . CDS 5195 5335 . - 0 ID=Thapsdraft635;Parent=Thapsdraft635;rank=4 bd_3x105 . exon 5195 5335 . - . ID=Thapsdraft635.4;Parent=Thapsdraft635;constitutive=1;rank=4 bd_3x105 . CDS 5409 5983 . - 0 ID=Thapsdraft635;Parent=Thapsdraft635;rank=3 bd_3x105 . exon 5409 5983 . - . ID=Thapsdraft635.3;Parent=Thapsdraft635;constitutive=1;ensembl_end_phase=2;rank=3 bd_3x105 . CDS 6067 6444 . - 0 ID=Thapsdraft635;Parent=Thapsdraft635;rank=2 bd_3x105 . exon 6067 6444 . - . ID=Thapsdraft635.2;Parent=Thapsdraft635;constitutive=1;rank=2 bd_3x105 . CDS 6529 6718 . - 0 ID=Thapsdraft635;Parent=Thapsdraft635;rank=1 bd_3x105 . exon 6529 6718 . - . ID=Thapsdraft635.1;Parent=Thapsdraft635;constitutive=1;ensembl_end_phase=1;rank=1 bd_3x105 . repeat_region 11201 11258 . ? . description=dust bd_3x105 . repeat_region 11289 12739 . - . description=Harbinger3_TP bd_3x105 . repeat_region 11665 11695 . ? . description=trf bd_3x105 . repeat_region 12741 14391 . - . description=Harbinger3_TP bd_3x105 . repeat_region 14211 14279 . ? . description=trf bd_3x105 ensembl protein_coding_gene 10800 11201 . - . ID=Thapsdraft1120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_3x105 ensembl transcript 10800 11201 . - . ID=Thapsdraft1120;Parent=Thapsdraft1120;biotype=protein_coding;logic_name=jgi_thaps3 bd_3x105 . CDS 10800 11201 . - 0 ID=Thapsdraft1120;Parent=Thapsdraft1120;rank=1 bd_3x105 . exon 10800 11201 . - . ID=Thapsdraft1120.1;Parent=Thapsdraft1120;constitutive=1;rank=1 bd_3x105 ensembl protein_coding_gene 8702 9106 . - . ID=Thapsdraft387;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_3x105 ensembl transcript 8702 9106 . - . ID=Thapsdraft387;Parent=Thapsdraft387;biotype=protein_coding;logic_name=jgi_thaps3 bd_3x105 . CDS 8702 9106 . - 0 ID=Thapsdraft387;Parent=Thapsdraft387;rank=1 bd_3x105 . exon 8702 9106 . - . ID=Thapsdraft387.1;Parent=Thapsdraft387;constitutive=1;rank=1 bd_3x105 ensembl protein_coding_gene 7745 8146 . + . ID=Thapsdraft636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_3x105 ensembl transcript 7745 8146 . + . ID=Thapsdraft636;Parent=Thapsdraft636;biotype=protein_coding;logic_name=jgi_thaps3 bd_3x105 . CDS 7745 8146 . + 0 ID=Thapsdraft636;Parent=Thapsdraft636;rank=1 bd_3x105 . exon 7745 8146 . + . ID=Thapsdraft636.1;Parent=Thapsdraft636;constitutive=1;rank=1 bd_3x105 ensembl protein_coding_gene 9284 10576 . + . ID=Thapsdraft96;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_3x105 ensembl transcript 9284 10576 . + . ID=Thapsdraft96;Parent=Thapsdraft96;biotype=protein_coding;logic_name=jgi_thaps3 bd_3x105 . CDS 9284 10034 . + 0 ID=Thapsdraft96;Parent=Thapsdraft96;rank=1 bd_3x105 . exon 9284 10034 . + . ID=Thapsdraft96.1;Parent=Thapsdraft96;constitutive=1;ensembl_end_phase=1;rank=1 bd_3x105 . CDS 10122 10576 . + 0 ID=Thapsdraft96;Parent=Thapsdraft96;rank=2 bd_3x105 . exon 10122 10576 . + . ID=Thapsdraft96.2;Parent=Thapsdraft96;constitutive=1;ensembl_end_phase=2;rank=2 ##gff-version 3 ##sequence-region bd_16x19 1 15242 bd_16x19 . repeat_region 2667 3394 . + . description=Copia6I_TP bd_16x19 . repeat_region 4079 4283 . + . description=Copia6I_TP bd_16x19 . repeat_region 6034 6083 . ? . description=dust bd_16x19 ensembl protein_coding_gene 128 709 . + . ID=Thapsdraft822;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEE3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_16x19 ensembl transcript 128 709 . + . ID=Thapsdraft822;Parent=Thapsdraft822;biotype=protein_coding;logic_name=jgi_thaps3 bd_16x19 . CDS 128 709 . + 0 ID=Thapsdraft822;Parent=Thapsdraft822;rank=1 bd_16x19 . exon 128 709 . + . ID=Thapsdraft822.1;Parent=Thapsdraft822;constitutive=1;rank=1 bd_16x19 ensembl protein_coding_gene 6641 7459 . + . ID=Thapsdraft824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEE0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_16x19 ensembl transcript 6641 7459 . + . ID=Thapsdraft824;Parent=Thapsdraft824;biotype=protein_coding;logic_name=jgi_thaps3 bd_16x19 . CDS 6641 7459 . + 0 ID=Thapsdraft824;Parent=Thapsdraft824;rank=1 bd_16x19 . exon 6641 7459 . + . ID=Thapsdraft824.1;Parent=Thapsdraft824;constitutive=1;rank=1 bd_16x19 . repeat_region 13125 13168 . ? . description=trf bd_16x19 ensembl protein_coding_gene 9164 15180 . - . ID=Thapsdraft1841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEE2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_16x19 ensembl transcript 9164 15180 . - . ID=Thapsdraft1841;Parent=Thapsdraft1841;biotype=protein_coding;logic_name=jgi_thaps3 bd_16x19 . CDS 9164 9341 . - 0 ID=Thapsdraft1841;Parent=Thapsdraft1841;rank=9 bd_16x19 . exon 9164 9341 . - . ID=Thapsdraft1841.9;Parent=Thapsdraft1841;constitutive=1;ensembl_end_phase=1;rank=9 bd_16x19 . CDS 10481 11395 . - 0 ID=Thapsdraft1841;Parent=Thapsdraft1841;rank=8 bd_16x19 . exon 10481 11395 . - . ID=Thapsdraft1841.8;Parent=Thapsdraft1841;constitutive=1;rank=8 bd_16x19 . CDS 11497 11704 . - 0 ID=Thapsdraft1841;Parent=Thapsdraft1841;rank=7 bd_16x19 . exon 11497 11704 . - . ID=Thapsdraft1841.7;Parent=Thapsdraft1841;constitutive=1;ensembl_end_phase=1;rank=7 bd_16x19 . CDS 11794 12773 . - 0 ID=Thapsdraft1841;Parent=Thapsdraft1841;rank=6 bd_16x19 . exon 11794 12773 . - . ID=Thapsdraft1841.6;Parent=Thapsdraft1841;constitutive=1;ensembl_end_phase=2;rank=6 bd_16x19 . CDS 12803 13182 . - 0 ID=Thapsdraft1841;Parent=Thapsdraft1841;rank=5 bd_16x19 . exon 12803 13182 . - . ID=Thapsdraft1841.5;Parent=Thapsdraft1841;constitutive=1;ensembl_end_phase=2;rank=5 bd_16x19 . CDS 13264 13568 . - 0 ID=Thapsdraft1841;Parent=Thapsdraft1841;rank=4 bd_16x19 . exon 13264 13568 . - . ID=Thapsdraft1841.4;Parent=Thapsdraft1841;constitutive=1;ensembl_end_phase=2;rank=4 bd_16x19 . CDS 13661 13762 . - 0 ID=Thapsdraft1841;Parent=Thapsdraft1841;rank=3 bd_16x19 . exon 13661 13762 . - . ID=Thapsdraft1841.3;Parent=Thapsdraft1841;constitutive=1;rank=3 bd_16x19 . CDS 13850 14867 . - 0 ID=Thapsdraft1841;Parent=Thapsdraft1841;rank=2 bd_16x19 . exon 13850 14867 . - . ID=Thapsdraft1841.2;Parent=Thapsdraft1841;constitutive=1;ensembl_end_phase=1;rank=2 bd_16x19 . CDS 14956 15180 . - 0 ID=Thapsdraft1841;Parent=Thapsdraft1841;rank=1 bd_16x19 . exon 14956 15180 . - . ID=Thapsdraft1841.1;Parent=Thapsdraft1841;constitutive=1;rank=1 bd_16x19 ensembl protein_coding_gene 8234 8806 . + . ID=Thapsdraft825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEE1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_16x19 ensembl transcript 8234 8806 . + . ID=Thapsdraft825;Parent=Thapsdraft825;biotype=protein_coding;logic_name=jgi_thaps3 bd_16x19 . CDS 8234 8806 . + 0 ID=Thapsdraft825;Parent=Thapsdraft825;rank=1 bd_16x19 . exon 8234 8806 . + . ID=Thapsdraft825.1;Parent=Thapsdraft825;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_9x52 1 16249 bd_9x52 . repeat_region 1 1811 . - . description=Copia2I_TP bd_9x52 . repeat_region 1812 2100 . - . description=Copia2LTR_TP bd_9x52 ensembl protein_coding_gene 3040 4725 . - . ID=Thapsdraft415;biotype=protein_coding;description=Simliar to phenylalanine-4-hydroxylase [Source:UniProtKB/TrEMBL%3BAcc:B8LE69];external_name=PAH1;logic_name=jgi_thaps3 bd_9x52 ensembl transcript 3040 4725 . - . ID=Thapsdraft415;Parent=Thapsdraft415;biotype=protein_coding;logic_name=jgi_thaps3 bd_9x52 . CDS 3040 3244 . - 0 ID=Thapsdraft415;Parent=Thapsdraft415;rank=7 bd_9x52 . exon 3040 3244 . - . ID=Thapsdraft415.7;Parent=Thapsdraft415;constitutive=1;ensembl_end_phase=1;rank=7 bd_9x52 . CDS 3287 3446 . - 0 ID=Thapsdraft415;Parent=Thapsdraft415;rank=6 bd_9x52 . exon 3287 3446 . - . ID=Thapsdraft415.6;Parent=Thapsdraft415;constitutive=1;ensembl_end_phase=1;rank=6 bd_9x52 . CDS 3511 3825 . - 0 ID=Thapsdraft415;Parent=Thapsdraft415;rank=5 bd_9x52 . exon 3511 3825 . - . ID=Thapsdraft415.5;Parent=Thapsdraft415;constitutive=1;rank=5 bd_9x52 . CDS 3933 3953 . - 0 ID=Thapsdraft415;Parent=Thapsdraft415;rank=4 bd_9x52 . exon 3933 3953 . - . ID=Thapsdraft415.4;Parent=Thapsdraft415;constitutive=1;rank=4 bd_9x52 . CDS 4025 4273 . - 0 ID=Thapsdraft415;Parent=Thapsdraft415;rank=3 bd_9x52 . exon 4025 4273 . - . ID=Thapsdraft415.3;Parent=Thapsdraft415;constitutive=1;rank=3 bd_9x52 . CDS 4396 4573 . - 0 ID=Thapsdraft415;Parent=Thapsdraft415;rank=2 bd_9x52 . exon 4396 4573 . - . ID=Thapsdraft415.2;Parent=Thapsdraft415;constitutive=1;ensembl_end_phase=1;rank=2 bd_9x52 . CDS 4667 4725 . - 0 ID=Thapsdraft415;Parent=Thapsdraft415;rank=1 bd_9x52 . exon 4667 4725 . - . ID=Thapsdraft415.1;Parent=Thapsdraft415;constitutive=1;ensembl_end_phase=2;rank=1 bd_9x52 ensembl protein_coding_gene 787 1067 . - . ID=Thapsdraft733;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFD7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_9x52 ensembl transcript 787 1067 . - . ID=Thapsdraft733;Parent=Thapsdraft733;biotype=protein_coding;logic_name=jgi_thaps3 bd_9x52 . CDS 787 1067 . - 0 ID=Thapsdraft733;Parent=Thapsdraft733;rank=1 bd_9x52 . exon 787 1067 . - . ID=Thapsdraft733.1;Parent=Thapsdraft733;constitutive=1;ensembl_end_phase=2;rank=1 bd_9x52 ensembl protein_coding_gene 5703 7439 . - . ID=Thapsdraft735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE70];external_name=Thaps24712;logic_name=jgi_thaps3 bd_9x52 ensembl transcript 5703 7439 . - . ID=Thapsdraft735;Parent=Thapsdraft735;biotype=protein_coding;logic_name=jgi_thaps3 bd_9x52 . CDS 5703 7439 . - 0 ID=Thapsdraft735;Parent=Thapsdraft735;rank=1 bd_9x52 . exon 5703 7439 . - . ID=Thapsdraft735.1;Parent=Thapsdraft735;constitutive=1;rank=1 bd_9x52 ensembl protein_coding_gene 7812 8876 . + . ID=Thapsdraft736;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE71];external_name=Thaps24712;logic_name=jgi_thaps3 bd_9x52 ensembl transcript 7812 8876 . + . ID=Thapsdraft736;Parent=Thapsdraft736;biotype=protein_coding;logic_name=jgi_thaps3 bd_9x52 . CDS 7812 8876 . + 0 ID=Thapsdraft736;Parent=Thapsdraft736;rank=1 bd_9x52 . exon 7812 8876 . + . ID=Thapsdraft736.1;Parent=Thapsdraft736;constitutive=1;rank=1 bd_9x52 . repeat_region 8312 8345 . ? . description=trf bd_9x52 . repeat_region 10255 10262 . ? . description=dust bd_9x52 . repeat_region 10390 10412 . ? . description=trf bd_9x52 . repeat_region 10390 10441 . ? . description=dust bd_9x52 . repeat_region 10410 10441 . ? . description=trf bd_9x52 ensembl protein_coding_gene 9270 10060 . - . ID=Thapsdraft737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE72];external_name=Thaps24712;logic_name=jgi_thaps3 bd_9x52 ensembl transcript 9270 10060 . - . ID=Thapsdraft737;Parent=Thapsdraft737;biotype=protein_coding;logic_name=jgi_thaps3 bd_9x52 . CDS 9270 9607 . - 0 ID=Thapsdraft737;Parent=Thapsdraft737;rank=2 bd_9x52 . exon 9270 9607 . - . ID=Thapsdraft737.2;Parent=Thapsdraft737;constitutive=1;ensembl_end_phase=2;rank=2 bd_9x52 . CDS 9703 10060 . - 0 ID=Thapsdraft737;Parent=Thapsdraft737;rank=1 bd_9x52 . exon 9703 10060 . - . ID=Thapsdraft737.1;Parent=Thapsdraft737;constitutive=1;ensembl_end_phase=1;rank=1 bd_9x52 ensembl protein_coding_gene 10932 11696 . - . ID=Thapsdraft738;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE73];external_name=Thaps24712;logic_name=jgi_thaps3 bd_9x52 ensembl transcript 10932 11696 . - . ID=Thapsdraft738;Parent=Thapsdraft738;biotype=protein_coding;logic_name=jgi_thaps3 bd_9x52 . CDS 10932 11696 . - 0 ID=Thapsdraft738;Parent=Thapsdraft738;rank=1 bd_9x52 . exon 10932 11696 . - . ID=Thapsdraft738.1;Parent=Thapsdraft738;constitutive=1;rank=1 bd_9x52 ensembl protein_coding_gene 12192 12953 . - . ID=Thapsdraft739;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE76];external_name=Thaps24712;logic_name=jgi_thaps3 bd_9x52 ensembl transcript 12192 12953 . - . ID=Thapsdraft739;Parent=Thapsdraft739;biotype=protein_coding;logic_name=jgi_thaps3 bd_9x52 . CDS 12192 12953 . - 0 ID=Thapsdraft739;Parent=Thapsdraft739;rank=1 bd_9x52 . exon 12192 12953 . - . ID=Thapsdraft739.1;Parent=Thapsdraft739;constitutive=1;rank=1 bd_9x52 ensembl protein_coding_gene 14009 14710 . + . ID=Thapsdraft740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE74];external_name=Thaps24712;logic_name=jgi_thaps3 bd_9x52 ensembl transcript 14009 14710 . + . ID=Thapsdraft740;Parent=Thapsdraft740;biotype=protein_coding;logic_name=jgi_thaps3 bd_9x52 . CDS 14009 14710 . + 0 ID=Thapsdraft740;Parent=Thapsdraft740;rank=1 bd_9x52 . exon 14009 14710 . + . ID=Thapsdraft740.1;Parent=Thapsdraft740;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_11x74 1 17378 bd_11x74 . repeat_region 1120 1179 . ? . description=trf bd_11x74 . repeat_region 1127 1181 . ? . description=trf bd_11x74 . repeat_region 1135 1194 . ? . description=trf bd_11x74 . repeat_region 1142 1204 . ? . description=trf bd_11x74 . repeat_region 6490 6497 . ? . description=dust bd_11x74 . biological_region 6536 6536 0.999 + . logic_name=eponine bd_11x74 ensembl protein_coding_gene 29 1363 . + . ID=Thapsdraft1809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE86];external_name=Thaps24712;logic_name=jgi_thaps3 bd_11x74 ensembl transcript 29 1363 . + . ID=Thapsdraft1809;Parent=Thapsdraft1809;biotype=protein_coding;logic_name=jgi_thaps3 bd_11x74 . CDS 29 87 . + 0 ID=Thapsdraft1809;Parent=Thapsdraft1809;rank=1 bd_11x74 . exon 29 87 . + . ID=Thapsdraft1809.1;Parent=Thapsdraft1809;constitutive=1;ensembl_end_phase=2;rank=1 bd_11x74 . CDS 126 561 . + 0 ID=Thapsdraft1809;Parent=Thapsdraft1809;rank=2 bd_11x74 . exon 126 561 . + . ID=Thapsdraft1809.2;Parent=Thapsdraft1809;constitutive=1;ensembl_end_phase=1;rank=2 bd_11x74 . CDS 648 851 . + 0 ID=Thapsdraft1809;Parent=Thapsdraft1809;rank=3 bd_11x74 . exon 648 851 . + . ID=Thapsdraft1809.3;Parent=Thapsdraft1809;constitutive=1;rank=3 bd_11x74 . CDS 937 1207 . + 0 ID=Thapsdraft1809;Parent=Thapsdraft1809;rank=4 bd_11x74 . exon 937 1207 . + . ID=Thapsdraft1809.4;Parent=Thapsdraft1809;constitutive=1;ensembl_end_phase=1;rank=4 bd_11x74 . CDS 1242 1363 . + 0 ID=Thapsdraft1809;Parent=Thapsdraft1809;rank=5 bd_11x74 . exon 1242 1363 . + . ID=Thapsdraft1809.5;Parent=Thapsdraft1809;constitutive=1;ensembl_end_phase=2;rank=5 bd_11x74 ensembl protein_coding_gene 6733 9127 . + . ID=Thapsdraft1810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE89];external_name=Thaps24712;logic_name=jgi_thaps3 bd_11x74 ensembl transcript 6733 9127 . + . ID=Thapsdraft1810;Parent=Thapsdraft1810;biotype=protein_coding;logic_name=jgi_thaps3 bd_11x74 . CDS 6733 7555 . + 0 ID=Thapsdraft1810;Parent=Thapsdraft1810;rank=1 bd_11x74 . exon 6733 7555 . + . ID=Thapsdraft1810.1;Parent=Thapsdraft1810;constitutive=1;ensembl_end_phase=1;rank=1 bd_11x74 . CDS 7642 8787 . + 0 ID=Thapsdraft1810;Parent=Thapsdraft1810;rank=2 bd_11x74 . exon 7642 8787 . + . ID=Thapsdraft1810.2;Parent=Thapsdraft1810;constitutive=1;rank=2 bd_11x74 . CDS 8883 9127 . + 0 ID=Thapsdraft1810;Parent=Thapsdraft1810;rank=3 bd_11x74 ensembl protein_coding_gene 1472 2491 . - . ID=Thapsdraft755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE87];external_name=Thaps24712;logic_name=jgi_thaps3 bd_11x74 ensembl transcript 1472 2491 . - . ID=Thapsdraft755;Parent=Thapsdraft755;biotype=protein_coding;logic_name=jgi_thaps3 bd_11x74 . CDS 1472 2491 . - 0 ID=Thapsdraft755;Parent=Thapsdraft755;rank=1 bd_11x74 . exon 1472 2491 . - . ID=Thapsdraft755.1;Parent=Thapsdraft755;constitutive=1;rank=1 bd_11x74 ensembl protein_coding_gene 2872 4503 . + . ID=Thapsdraft756;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE88];external_name=Thaps24712;logic_name=jgi_thaps3 bd_11x74 ensembl transcript 2872 4503 . + . ID=Thapsdraft756;Parent=Thapsdraft756;biotype=protein_coding;logic_name=jgi_thaps3 bd_11x74 . CDS 2872 4503 . + 0 ID=Thapsdraft756;Parent=Thapsdraft756;rank=1 bd_11x74 . exon 2872 4503 . + . ID=Thapsdraft756.1;Parent=Thapsdraft756;constitutive=1;rank=1 bd_11x74 . exon 8883 9127 . + . ID=Thapsdraft1810.3;Parent=Thapsdraft1810;constitutive=1;ensembl_end_phase=2;rank=3 bd_11x74 ensembl protein_coding_gene 9635 12077 . + . ID=Thapsdraft758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE90];external_name=Thaps24712;logic_name=jgi_thaps3 bd_11x74 ensembl transcript 9635 12077 . + . ID=Thapsdraft758;Parent=Thapsdraft758;biotype=protein_coding;logic_name=jgi_thaps3 bd_11x74 . CDS 9635 10481 . + 0 ID=Thapsdraft758;Parent=Thapsdraft758;rank=1 bd_11x74 . exon 9635 10481 . + . ID=Thapsdraft758.1;Parent=Thapsdraft758;constitutive=1;ensembl_end_phase=1;rank=1 bd_11x74 . CDS 10666 12077 . + 0 ID=Thapsdraft758;Parent=Thapsdraft758;rank=2 bd_11x74 . exon 10666 12077 . + . ID=Thapsdraft758.2;Parent=Thapsdraft758;constitutive=1;ensembl_end_phase=2;rank=2 bd_11x74 ensembl protein_coding_gene 13143 14474 . + . ID=Thapsdraft759;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE91];external_name=Thaps24712;logic_name=jgi_thaps3 bd_11x74 ensembl transcript 13143 14474 . + . ID=Thapsdraft759;Parent=Thapsdraft759;biotype=protein_coding;logic_name=jgi_thaps3 bd_11x74 . CDS 13143 13457 . + 0 ID=Thapsdraft759;Parent=Thapsdraft759;rank=1 bd_11x74 . exon 13143 13457 . + . ID=Thapsdraft759.1;Parent=Thapsdraft759;constitutive=1;rank=1 bd_11x74 . CDS 13722 14474 . + 0 ID=Thapsdraft759;Parent=Thapsdraft759;rank=2 bd_11x74 . exon 13722 14474 . + . ID=Thapsdraft759.2;Parent=Thapsdraft759;constitutive=1;rank=2 bd_11x74 ensembl protein_coding_gene 16371 17301 . + . ID=Thapsdraft760;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE92];external_name=Thaps24712;logic_name=jgi_thaps3 bd_11x74 ensembl transcript 16371 17301 . + . ID=Thapsdraft760;Parent=Thapsdraft760;biotype=protein_coding;logic_name=jgi_thaps3 bd_11x74 . CDS 16371 16624 . + 0 ID=Thapsdraft760;Parent=Thapsdraft760;rank=1 bd_11x74 . exon 16371 16624 . + . ID=Thapsdraft760.1;Parent=Thapsdraft760;constitutive=1;ensembl_end_phase=2;rank=1 bd_11x74 . CDS 16653 17301 . + 0 ID=Thapsdraft760;Parent=Thapsdraft760;rank=2 bd_11x74 . exon 16653 17301 . + . ID=Thapsdraft760.2;Parent=Thapsdraft760;constitutive=1;ensembl_end_phase=1;rank=2 ##gff-version 3 ##sequence-region bd_36x69 1 19101 bd_36x69 . repeat_region 1 137 . - . description=RTE1_TP bd_36x69 . repeat_region 138 995 . ? . description=trf bd_36x69 . repeat_region 200 295 . ? . description=trf bd_36x69 . repeat_region 398 493 . ? . description=trf bd_36x69 . repeat_region 596 691 . ? . description=trf bd_36x69 . repeat_region 794 889 . ? . description=trf bd_36x69 . repeat_region 1105 2228 . ? . description=dust bd_36x69 . repeat_region 3369 6162 . ? . description=dust bd_36x69 . repeat_region 7255 7304 . ? . description=dust bd_36x69 . repeat_region 8104 8153 . ? . description=dust bd_36x69 . repeat_region 8205 8300 . ? . description=trf bd_36x69 . repeat_region 8519 8631 . ? . description=dust bd_36x69 . repeat_region 8637 9010 . ? . description=trf bd_36x69 . repeat_region 8637 9010 . ? . description=dust bd_36x69 . repeat_region 9015 9189 . - . description=RTE1_TP bd_36x69 . repeat_region 9033 9346 . ? . description=trf bd_36x69 . repeat_region 9063 9083 . ? . description=trf bd_36x69 . repeat_region 9191 9402 . - . description=RTE1_TP bd_36x69 . repeat_region 9220 9240 . ? . description=trf bd_36x69 . repeat_region 9465 9560 . ? . description=trf ##gff-version 3 ##sequence-region bd_5x160 1 19547 bd_5x160 . repeat_region 3308 4612 . - . description=Copia6I_TP bd_5x160 . repeat_region 4613 4847 . - . description=Copia6LTR_TP bd_5x160 . repeat_region 5127 5166 . ? . description=trf bd_5x160 . repeat_region 5127 5166 . ? . description=dust bd_5x160 . repeat_region 8673 8686 . ? . description=dust bd_5x160 ensembl protein_coding_gene 5985 6404 . + . ID=Thapsdraft1125;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_5x160 ensembl transcript 5985 6404 . + . ID=Thapsdraft1125;Parent=Thapsdraft1125;biotype=protein_coding;logic_name=jgi_thaps3 bd_5x160 . CDS 5985 6404 . + 0 ID=Thapsdraft1125;Parent=Thapsdraft1125;rank=1 bd_5x160 . exon 5985 6404 . + . ID=Thapsdraft1125.1;Parent=Thapsdraft1125;constitutive=1;rank=1 bd_5x160 ensembl protein_coding_gene 184 2906 . - . ID=Thapsdraft1754;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_5x160 ensembl transcript 184 2906 . - . ID=Thapsdraft1754;Parent=Thapsdraft1754;biotype=protein_coding;logic_name=jgi_thaps3 bd_5x160 . CDS 184 254 . - 0 ID=Thapsdraft1754;Parent=Thapsdraft1754;rank=4 bd_5x160 . exon 184 254 . - . ID=Thapsdraft1754.4;Parent=Thapsdraft1754;constitutive=1;ensembl_end_phase=2;rank=4 bd_5x160 . CDS 275 1142 . - 0 ID=Thapsdraft1754;Parent=Thapsdraft1754;rank=3 bd_5x160 . exon 275 1142 . - . ID=Thapsdraft1754.3;Parent=Thapsdraft1754;constitutive=1;ensembl_end_phase=1;rank=3 bd_5x160 . CDS 1179 2858 . - 0 ID=Thapsdraft1754;Parent=Thapsdraft1754;rank=2 bd_5x160 . exon 1179 2858 . - . ID=Thapsdraft1754.2;Parent=Thapsdraft1754;constitutive=1;rank=2 bd_5x160 . CDS 2883 2906 . - 0 ID=Thapsdraft1754;Parent=Thapsdraft1754;rank=1 bd_5x160 . exon 2883 2906 . - . ID=Thapsdraft1754.1;Parent=Thapsdraft1754;constitutive=1;rank=1 bd_5x160 ensembl protein_coding_gene 6826 9036 . - . ID=Thapsdraft1755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_5x160 ensembl transcript 6826 9036 . - . ID=Thapsdraft1755;Parent=Thapsdraft1755;biotype=protein_coding;logic_name=jgi_thaps3 bd_5x160 . CDS 6826 7918 . - 0 ID=Thapsdraft1755;Parent=Thapsdraft1755;rank=4 bd_5x160 . exon 6826 7918 . - . ID=Thapsdraft1755.4;Parent=Thapsdraft1755;constitutive=1;ensembl_end_phase=1;rank=4 bd_5x160 . CDS 8045 8205 . - 0 ID=Thapsdraft1755;Parent=Thapsdraft1755;rank=3 bd_5x160 . exon 8045 8205 . - . ID=Thapsdraft1755.3;Parent=Thapsdraft1755;constitutive=1;ensembl_end_phase=2;rank=3 bd_5x160 . CDS 8320 8447 . - 0 ID=Thapsdraft1755;Parent=Thapsdraft1755;rank=2 bd_5x160 . exon 8320 8447 . - . ID=Thapsdraft1755.2;Parent=Thapsdraft1755;constitutive=1;ensembl_end_phase=2;rank=2 bd_5x160 . CDS 8598 9036 . - 0 ID=Thapsdraft1755;Parent=Thapsdraft1755;rank=1 bd_5x160 . exon 8598 9036 . - . ID=Thapsdraft1755.1;Parent=Thapsdraft1755;constitutive=1;ensembl_end_phase=1;rank=1 bd_5x160 . repeat_region 13557 14440 . + . description=Harbinger3_TP bd_5x160 . repeat_region 14429 17277 . + . description=Harbinger3_TP bd_5x160 ensembl protein_coding_gene 10358 10777 . - . ID=Thapsdraft1124;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDZ9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_5x160 ensembl transcript 10358 10777 . - . ID=Thapsdraft1124;Parent=Thapsdraft1124;biotype=protein_coding;logic_name=jgi_thaps3 bd_5x160 . CDS 10358 10777 . - 0 ID=Thapsdraft1124;Parent=Thapsdraft1124;rank=1 bd_5x160 . exon 10358 10777 . - . ID=Thapsdraft1124.1;Parent=Thapsdraft1124;constitutive=1;rank=1 bd_5x160 ensembl protein_coding_gene 18661 19115 . - . ID=Thapsdraft1756;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE01];external_name=Thaps24712;logic_name=jgi_thaps3 bd_5x160 ensembl transcript 18661 19115 . - . ID=Thapsdraft1756;Parent=Thapsdraft1756;biotype=protein_coding;logic_name=jgi_thaps3 bd_5x160 . CDS 18661 18732 . - 0 ID=Thapsdraft1756;Parent=Thapsdraft1756;rank=3 bd_5x160 . exon 18661 18732 . - . ID=Thapsdraft1756.3;Parent=Thapsdraft1756;constitutive=1;rank=3 bd_5x160 . CDS 18830 18865 . - 0 ID=Thapsdraft1756;Parent=Thapsdraft1756;rank=2 bd_5x160 . exon 18830 18865 . - . ID=Thapsdraft1756.2;Parent=Thapsdraft1756;constitutive=1;rank=2 bd_5x160 . CDS 18954 19115 . - 0 ID=Thapsdraft1756;Parent=Thapsdraft1756;rank=1 bd_5x160 . exon 18954 19115 . - . ID=Thapsdraft1756.1;Parent=Thapsdraft1756;constitutive=1;rank=1 bd_5x160 ensembl protein_coding_gene 12325 12672 . - . ID=Thapsdraft648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE00];external_name=Thaps24712;logic_name=jgi_thaps3 bd_5x160 ensembl transcript 12325 12672 . - . ID=Thapsdraft648;Parent=Thapsdraft648;biotype=protein_coding;logic_name=jgi_thaps3 bd_5x160 . CDS 12325 12672 . - 0 ID=Thapsdraft648;Parent=Thapsdraft648;rank=1 bd_5x160 . exon 12325 12672 . - . ID=Thapsdraft648.1;Parent=Thapsdraft648;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_24x33 1 20732 bd_24x33 . repeat_region 1 382 . ? . description=trf bd_24x33 . repeat_region 350 732 . ? . description=trf bd_24x33 . repeat_region 426 523 . ? . description=trf bd_24x33 . repeat_region 616 670 . ? . description=trf bd_24x33 . repeat_region 1390 1451 . ? . description=trf bd_24x33 . repeat_region 1390 1473 . ? . description=trf bd_24x33 . repeat_region 1406 1491 . ? . description=trf bd_24x33 . repeat_region 2281 2324 . ? . description=trf bd_24x33 . biological_region 2816 2817 0.999 + . logic_name=eponine bd_24x33 ensembl protein_coding_gene 1064 3045 . - . ID=Thapsdraft1890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEP1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_24x33 ensembl transcript 1064 3045 . - . ID=Thapsdraft1890;Parent=Thapsdraft1890;biotype=protein_coding;logic_name=jgi_thaps3 bd_24x33 . CDS 1064 1292 . - 0 ID=Thapsdraft1890;Parent=Thapsdraft1890;rank=2 bd_24x33 . exon 1064 1292 . - . ID=Thapsdraft1890.2;Parent=Thapsdraft1890;constitutive=1;ensembl_end_phase=1;rank=2 bd_24x33 . CDS 1523 3045 . - 0 ID=Thapsdraft1890;Parent=Thapsdraft1890;rank=1 bd_24x33 . exon 1523 3045 . - . ID=Thapsdraft1890.1;Parent=Thapsdraft1890;constitutive=1;ensembl_end_phase=2;rank=1 bd_24x33 ensembl protein_coding_gene 4623 9399 . + . ID=Thapsdraft1891;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEP2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_24x33 ensembl transcript 4623 9399 . + . ID=Thapsdraft1891;Parent=Thapsdraft1891;biotype=protein_coding;logic_name=jgi_thaps3 bd_24x33 . CDS 4623 4763 . + 0 ID=Thapsdraft1891;Parent=Thapsdraft1891;rank=1 bd_24x33 . exon 4623 4763 . + . ID=Thapsdraft1891.1;Parent=Thapsdraft1891;constitutive=1;rank=1 bd_24x33 . CDS 4846 6795 . + 0 ID=Thapsdraft1891;Parent=Thapsdraft1891;rank=2 bd_24x33 . exon 4846 6795 . + . ID=Thapsdraft1891.2;Parent=Thapsdraft1891;constitutive=1;rank=2 bd_24x33 . CDS 6883 8113 . + 0 ID=Thapsdraft1891;Parent=Thapsdraft1891;rank=3 bd_24x33 . exon 6883 8113 . + . ID=Thapsdraft1891.3;Parent=Thapsdraft1891;constitutive=1;ensembl_end_phase=1;rank=3 bd_24x33 . CDS 8214 8314 . + 0 ID=Thapsdraft1891;Parent=Thapsdraft1891;rank=4 bd_24x33 . CDS 8391 8641 . + 0 ID=Thapsdraft1891;Parent=Thapsdraft1891;rank=5 bd_24x33 . CDS 8740 9305 . + 0 ID=Thapsdraft1891;Parent=Thapsdraft1891;rank=6 bd_24x33 . CDS 9326 9399 . + 0 ID=Thapsdraft1891;Parent=Thapsdraft1891;rank=7 bd_24x33 . exon 8214 8314 . + . ID=Thapsdraft1891.4;Parent=Thapsdraft1891;constitutive=1;ensembl_end_phase=2;rank=4 bd_24x33 . exon 8391 8641 . + . ID=Thapsdraft1891.5;Parent=Thapsdraft1891;constitutive=1;ensembl_end_phase=2;rank=5 bd_24x33 . exon 8740 9305 . + . ID=Thapsdraft1891.6;Parent=Thapsdraft1891;constitutive=1;ensembl_end_phase=2;rank=6 bd_24x33 . exon 9326 9399 . + . ID=Thapsdraft1891.7;Parent=Thapsdraft1891;constitutive=1;ensembl_end_phase=2;rank=7 bd_24x33 ensembl protein_coding_gene 10993 11948 . - . ID=Thapsdraft1893;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEP3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_24x33 ensembl transcript 10993 11948 . - . ID=Thapsdraft1893;Parent=Thapsdraft1893;biotype=protein_coding;logic_name=jgi_thaps3 bd_24x33 . CDS 10993 11602 . - 0 ID=Thapsdraft1893;Parent=Thapsdraft1893;rank=3 bd_24x33 . exon 10993 11602 . - . ID=Thapsdraft1893.3;Parent=Thapsdraft1893;constitutive=1;ensembl_end_phase=1;rank=3 bd_24x33 . CDS 11698 11843 . - 0 ID=Thapsdraft1893;Parent=Thapsdraft1893;rank=2 bd_24x33 . exon 11698 11843 . - . ID=Thapsdraft1893.2;Parent=Thapsdraft1893;constitutive=1;ensembl_end_phase=2;rank=2 bd_24x33 . CDS 11934 11948 . - 0 ID=Thapsdraft1893;Parent=Thapsdraft1893;rank=1 bd_24x33 . exon 11934 11948 . - . ID=Thapsdraft1893.1;Parent=Thapsdraft1893;constitutive=1;rank=1 bd_24x33 ensembl protein_coding_gene 12024 12696 . - . ID=Thapsdraft950;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEP4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_24x33 ensembl transcript 12024 12696 . - . ID=Thapsdraft950;Parent=Thapsdraft950;biotype=protein_coding;logic_name=jgi_thaps3 bd_24x33 . CDS 12024 12065 . - 0 ID=Thapsdraft950;Parent=Thapsdraft950;rank=3 bd_24x33 . exon 12024 12065 . - . ID=Thapsdraft950.3;Parent=Thapsdraft950;constitutive=1;rank=3 bd_24x33 . CDS 12174 12462 . - 0 ID=Thapsdraft950;Parent=Thapsdraft950;rank=2 bd_24x33 . exon 12174 12462 . - . ID=Thapsdraft950.2;Parent=Thapsdraft950;constitutive=1;ensembl_end_phase=1;rank=2 bd_24x33 . CDS 12545 12696 . - 0 ID=Thapsdraft950;Parent=Thapsdraft950;rank=1 bd_24x33 . exon 12545 12696 . - . ID=Thapsdraft950.1;Parent=Thapsdraft950;constitutive=1;ensembl_end_phase=2;rank=1 bd_24x33 ensembl protein_coding_gene 12875 14808 . - . ID=Thapsdraft951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEP5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_24x33 ensembl transcript 12875 14808 . - . ID=Thapsdraft951;Parent=Thapsdraft951;biotype=protein_coding;logic_name=jgi_thaps3 bd_24x33 . CDS 12875 14808 . - 0 ID=Thapsdraft951;Parent=Thapsdraft951;rank=1 bd_24x33 . exon 12875 14808 . - . ID=Thapsdraft951.1;Parent=Thapsdraft951;constitutive=1;ensembl_end_phase=2;rank=1 bd_24x33 . repeat_region 13892 13947 . ? . description=dust bd_24x33 . repeat_region 15787 15799 . ? . description=dust bd_24x33 . repeat_region 16297 16443 . ? . description=trf bd_24x33 . repeat_region 19443 19813 . ? . description=trf bd_24x33 ensembl protein_coding_gene 17201 18820 . + . ID=Thapsdraft463;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LEP6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_24x33 ensembl transcript 17201 18820 . + . ID=Thapsdraft463;Parent=Thapsdraft463;biotype=protein_coding;logic_name=jgi_thaps3 bd_24x33 . CDS 17201 17447 . + 0 ID=Thapsdraft463;Parent=Thapsdraft463;rank=1 bd_24x33 . exon 17201 17447 . + . ID=Thapsdraft463.1;Parent=Thapsdraft463;constitutive=1;ensembl_end_phase=1;rank=1 bd_24x33 . CDS 17706 18524 . + 0 ID=Thapsdraft463;Parent=Thapsdraft463;rank=2 bd_24x33 . exon 17706 18524 . + . ID=Thapsdraft463.2;Parent=Thapsdraft463;constitutive=1;rank=2 bd_24x33 . CDS 18627 18820 . + 0 ID=Thapsdraft463;Parent=Thapsdraft463;rank=3 bd_24x33 . exon 18627 18820 . + . ID=Thapsdraft463.3;Parent=Thapsdraft463;constitutive=1;ensembl_end_phase=2;rank=3 bd_24x33 ensembl protein_coding_gene 19870 20292 . - . ID=Thapsdraft953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEP7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_24x33 ensembl transcript 19870 20292 . - . ID=Thapsdraft953;Parent=Thapsdraft953;biotype=protein_coding;logic_name=jgi_thaps3 bd_24x33 . CDS 19870 20292 . - 0 ID=Thapsdraft953;Parent=Thapsdraft953;rank=1 bd_24x33 . exon 19870 20292 . - . ID=Thapsdraft953.1;Parent=Thapsdraft953;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_15x19 1 21366 bd_15x19 . repeat_region 1202 1234 . ? . description=trf bd_15x19 . repeat_region 1878 2161 . ? . description=trf bd_15x19 . repeat_region 2159 3045 . + . description=Copia6I_TP bd_15x19 . repeat_region 3722 3940 . + . description=PtCopiaLikeTe2 bd_15x19 ensembl protein_coding_gene 1521 2036 . + . ID=Thapsdraft816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_15x19 ensembl transcript 1521 2036 . + . ID=Thapsdraft816;Parent=Thapsdraft816;biotype=protein_coding;logic_name=jgi_thaps3 bd_15x19 . CDS 1521 2036 . + 0 ID=Thapsdraft816;Parent=Thapsdraft816;rank=1 bd_15x19 . exon 1521 2036 . + . ID=Thapsdraft816.1;Parent=Thapsdraft816;constitutive=1;rank=1 bd_15x19 ensembl protein_coding_gene 4777 8803 . - . ID=Thapsdraft818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_15x19 ensembl transcript 4777 8803 . - . ID=Thapsdraft818;Parent=Thapsdraft818;biotype=protein_coding;logic_name=jgi_thaps3 bd_15x19 . CDS 4777 5112 . - 0 ID=Thapsdraft818;Parent=Thapsdraft818;rank=6 bd_15x19 . exon 4777 5112 . - . ID=Thapsdraft818.6;Parent=Thapsdraft818;constitutive=1;rank=6 bd_15x19 . CDS 5196 5474 . - 0 ID=Thapsdraft818;Parent=Thapsdraft818;rank=5 bd_15x19 . exon 5196 5474 . - . ID=Thapsdraft818.5;Parent=Thapsdraft818;constitutive=1;rank=5 bd_15x19 . CDS 5507 6710 . - 0 ID=Thapsdraft818;Parent=Thapsdraft818;rank=4 bd_15x19 . exon 5507 6710 . - . ID=Thapsdraft818.4;Parent=Thapsdraft818;constitutive=1;ensembl_end_phase=1;rank=4 bd_15x19 . CDS 6761 7376 . - 0 ID=Thapsdraft818;Parent=Thapsdraft818;rank=3 bd_15x19 . exon 6761 7376 . - . ID=Thapsdraft818.3;Parent=Thapsdraft818;constitutive=1;ensembl_end_phase=1;rank=3 bd_15x19 . CDS 7560 8441 . - 0 ID=Thapsdraft818;Parent=Thapsdraft818;rank=2 bd_15x19 . CDS 8560 8803 . - 0 ID=Thapsdraft818;Parent=Thapsdraft818;rank=1 bd_15x19 . repeat_region 9468 9931 . - . description=Copia8I_TP bd_15x19 ensembl protein_coding_gene 10437 14803 . - . ID=Thapsdraft1839;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_15x19 ensembl transcript 10437 14803 . - . ID=Thapsdraft1839;Parent=Thapsdraft1839;biotype=protein_coding;logic_name=jgi_thaps3 bd_15x19 . CDS 10437 10913 . - 0 ID=Thapsdraft1839;Parent=Thapsdraft1839;rank=8 bd_15x19 . exon 10437 10913 . - . ID=Thapsdraft1839.8;Parent=Thapsdraft1839;constitutive=1;rank=8 bd_15x19 . CDS 11061 11108 . - 0 ID=Thapsdraft1839;Parent=Thapsdraft1839;rank=7 bd_15x19 . exon 11061 11108 . - . ID=Thapsdraft1839.7;Parent=Thapsdraft1839;constitutive=1;rank=7 bd_15x19 . CDS 11188 11222 . - 0 ID=Thapsdraft1839;Parent=Thapsdraft1839;rank=6 bd_15x19 . exon 11188 11222 . - . ID=Thapsdraft1839.6;Parent=Thapsdraft1839;constitutive=1;ensembl_end_phase=2;rank=6 bd_15x19 . CDS 11306 12843 . - 0 ID=Thapsdraft1839;Parent=Thapsdraft1839;rank=5 bd_15x19 . exon 11306 12843 . - . ID=Thapsdraft1839.5;Parent=Thapsdraft1839;constitutive=1;ensembl_end_phase=2;rank=5 bd_15x19 . CDS 12959 13274 . - 0 ID=Thapsdraft1839;Parent=Thapsdraft1839;rank=4 bd_15x19 . exon 12959 13274 . - . ID=Thapsdraft1839.4;Parent=Thapsdraft1839;constitutive=1;ensembl_end_phase=1;rank=4 bd_15x19 . CDS 13357 13698 . - 0 ID=Thapsdraft1839;Parent=Thapsdraft1839;rank=3 bd_15x19 . exon 13357 13698 . - . ID=Thapsdraft1839.3;Parent=Thapsdraft1839;constitutive=1;rank=3 bd_15x19 . CDS 13793 14038 . - 0 ID=Thapsdraft1839;Parent=Thapsdraft1839;rank=2 bd_15x19 . exon 13793 14038 . - . ID=Thapsdraft1839.2;Parent=Thapsdraft1839;constitutive=1;rank=2 bd_15x19 . CDS 14137 14803 . - 0 ID=Thapsdraft1839;Parent=Thapsdraft1839;rank=1 bd_15x19 . exon 14137 14803 . - . ID=Thapsdraft1839.1;Parent=Thapsdraft1839;constitutive=1;ensembl_end_phase=1;rank=1 bd_15x19 . exon 7560 8441 . - . ID=Thapsdraft818.2;Parent=Thapsdraft818;constitutive=1;rank=2 bd_15x19 . exon 8560 8803 . - . ID=Thapsdraft818.1;Parent=Thapsdraft818;constitutive=1;ensembl_end_phase=1;rank=1 bd_15x19 . repeat_region 15130 15138 . ? . description=dust bd_15x19 . repeat_region 20695 20702 . ? . description=dust bd_15x19 . repeat_region 20995 21035 . ? . description=trf bd_15x19 . repeat_region 20995 21035 . ? . description=dust bd_15x19 ensembl protein_coding_gene 15691 16496 . + . ID=Thapsdraft1840;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_15x19 ensembl transcript 15691 16496 . + . ID=Thapsdraft1840;Parent=Thapsdraft1840;biotype=protein_coding;logic_name=jgi_thaps3 bd_15x19 . CDS 15691 15993 . + 0 ID=Thapsdraft1840;Parent=Thapsdraft1840;rank=1 bd_15x19 . exon 15691 15993 . + . ID=Thapsdraft1840.1;Parent=Thapsdraft1840;constitutive=1;rank=1 bd_15x19 . CDS 16099 16364 . + 0 ID=Thapsdraft1840;Parent=Thapsdraft1840;rank=2 bd_15x19 . exon 16099 16364 . + . ID=Thapsdraft1840.2;Parent=Thapsdraft1840;constitutive=1;ensembl_end_phase=2;rank=2 bd_15x19 . CDS 16384 16396 . + 0 ID=Thapsdraft1840;Parent=Thapsdraft1840;rank=3 bd_15x19 . exon 16384 16396 . + . ID=Thapsdraft1840.3;Parent=Thapsdraft1840;constitutive=1;ensembl_end_phase=1;rank=3 bd_15x19 . CDS 16437 16496 . + 0 ID=Thapsdraft1840;Parent=Thapsdraft1840;rank=4 bd_15x19 . exon 16437 16496 . + . ID=Thapsdraft1840.4;Parent=Thapsdraft1840;constitutive=1;rank=4 bd_15x19 ensembl protein_coding_gene 19384 20406 . + . ID=Thapsdraft821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_15x19 ensembl transcript 19384 20406 . + . ID=Thapsdraft821;Parent=Thapsdraft821;biotype=protein_coding;logic_name=jgi_thaps3 bd_15x19 . CDS 19384 19534 . + 0 ID=Thapsdraft821;Parent=Thapsdraft821;rank=1 bd_15x19 . exon 19384 19534 . + . ID=Thapsdraft821.1;Parent=Thapsdraft821;constitutive=1;ensembl_end_phase=1;rank=1 bd_15x19 . CDS 19743 19874 . + 0 ID=Thapsdraft821;Parent=Thapsdraft821;rank=2 bd_15x19 . exon 19743 19874 . + . ID=Thapsdraft821.2;Parent=Thapsdraft821;constitutive=1;rank=2 bd_15x19 . CDS 19973 20044 . + 0 ID=Thapsdraft821;Parent=Thapsdraft821;rank=3 bd_15x19 . exon 19973 20044 . + . ID=Thapsdraft821.3;Parent=Thapsdraft821;constitutive=1;rank=3 bd_15x19 . CDS 20072 20406 . + 0 ID=Thapsdraft821;Parent=Thapsdraft821;rank=4 bd_15x19 . exon 20072 20406 . + . ID=Thapsdraft821.4;Parent=Thapsdraft821;constitutive=1;ensembl_end_phase=2;rank=4 ##gff-version 3 ##sequence-region bd_35x67 1 21413 bd_35x67 . repeat_region 998 2421 . ? . description=dust bd_35x67 . repeat_region 5600 7211 . + . description=Copia9I_TP bd_35x67 ensembl protein_coding_gene 3009 4858 . + . ID=Thapsdraft1097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_35x67 ensembl transcript 3009 4858 . + . ID=Thapsdraft1097;Parent=Thapsdraft1097;biotype=protein_coding;logic_name=jgi_thaps3 bd_35x67 . CDS 3009 3631 . + 0 ID=Thapsdraft1097;Parent=Thapsdraft1097;rank=1 bd_35x67 . exon 3009 3631 . + . ID=Thapsdraft1097.1;Parent=Thapsdraft1097;constitutive=1;ensembl_end_phase=2;rank=1 bd_35x67 . CDS 3790 4858 . + 0 ID=Thapsdraft1097;Parent=Thapsdraft1097;rank=2 bd_35x67 . exon 3790 4858 . + . ID=Thapsdraft1097.2;Parent=Thapsdraft1097;constitutive=1;ensembl_end_phase=1;rank=2 bd_35x67 ensembl protein_coding_gene 2 649 . + . ID=Thapsdraft190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_35x67 ensembl transcript 2 649 . + . ID=Thapsdraft190;Parent=Thapsdraft190;biotype=protein_coding;logic_name=jgi_thaps3 bd_35x67 . CDS 2 649 . + 0 ID=Thapsdraft190;Parent=Thapsdraft190;rank=1 bd_35x67 . exon 2 649 . + . ID=Thapsdraft190.1;Parent=Thapsdraft190;constitutive=1;rank=1 bd_35x67 . repeat_region 8311 8506 . + . description=TE2b_TP bd_35x67 . repeat_region 8334 8393 . ? . description=trf bd_35x67 . repeat_region 8527 8739 . + . description=tp14_ASNotSingleton bd_35x67 . repeat_region 8862 9066 . ? . description=trf bd_35x67 . repeat_region 9869 9959 . + . description=TE2b_TP bd_35x67 . repeat_region 9948 10005 . + . description=Harbinger1_TP bd_35x67 . repeat_region 12219 12258 . ? . description=trf bd_35x67 ensembl protein_coding_gene 8817 9687 . + . ID=Thapsdraft1098;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_35x67 ensembl transcript 8817 9687 . + . ID=Thapsdraft1098;Parent=Thapsdraft1098;biotype=protein_coding;logic_name=jgi_thaps3 bd_35x67 . CDS 8817 9149 . + 0 ID=Thapsdraft1098;Parent=Thapsdraft1098;rank=1 bd_35x67 . exon 8817 9149 . + . ID=Thapsdraft1098.1;Parent=Thapsdraft1098;constitutive=1;rank=1 bd_35x67 . CDS 9229 9687 . + 0 ID=Thapsdraft1098;Parent=Thapsdraft1098;rank=2 bd_35x67 . exon 9229 9687 . + . ID=Thapsdraft1098.2;Parent=Thapsdraft1098;constitutive=1;rank=2 bd_35x67 ensembl protein_coding_gene 12418 15820 . - . ID=Thapsdraft1100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_35x67 ensembl transcript 12418 15820 . - . ID=Thapsdraft1100;Parent=Thapsdraft1100;biotype=protein_coding;logic_name=jgi_thaps3 bd_35x67 . CDS 12418 12713 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=14 bd_35x67 . exon 12418 12713 . - . ID=Thapsdraft1100.14;Parent=Thapsdraft1100;constitutive=1;ensembl_end_phase=2;rank=14 bd_35x67 . CDS 12813 13115 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=13 bd_35x67 . exon 12813 13115 . - . ID=Thapsdraft1100.13;Parent=Thapsdraft1100;constitutive=1;rank=13 bd_35x67 . CDS 13309 13362 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=12 bd_35x67 . exon 13309 13362 . - . ID=Thapsdraft1100.12;Parent=Thapsdraft1100;constitutive=1;rank=12 bd_35x67 . CDS 13809 13862 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=11 bd_35x67 . exon 13809 13862 . - . ID=Thapsdraft1100.11;Parent=Thapsdraft1100;constitutive=1;rank=11 bd_35x67 . CDS 13935 13954 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=10 bd_35x67 . exon 13935 13954 . - . ID=Thapsdraft1100.10;Parent=Thapsdraft1100;constitutive=1;ensembl_end_phase=2;rank=10 bd_35x67 . CDS 14286 14339 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=9 bd_35x67 . CDS 14422 14458 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=8 bd_35x67 . CDS 14540 14557 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=7 bd_35x67 . CDS 14665 14703 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=6 bd_35x67 . CDS 14793 14849 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=5 bd_35x67 . CDS 14917 14973 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=4 bd_35x67 . CDS 15044 15250 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=3 bd_35x67 . CDS 15330 15386 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=2 bd_35x67 . CDS 15463 15820 . - 0 ID=Thapsdraft1100;Parent=Thapsdraft1100;rank=1 bd_35x67 ensembl gene 10944 11547 . + . ID=Thapsdraft517;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 bd_35x67 ensembl transcript 10944 11547 . + . ID=Thapsdraft517;Parent=Thapsdraft517;biotype=nontranslating_CDS;logic_name=jgi_thaps3 bd_35x67 . exon 10944 11070 . + . ID=Thapsdraft517.1;Parent=Thapsdraft517;constitutive=1;ensembl_end_phase=1;rank=1 bd_35x67 . exon 11141 11547 . + . ID=Thapsdraft517.2;Parent=Thapsdraft517;constitutive=1;ensembl_end_phase=2;rank=2 bd_35x67 . repeat_region 17612 17661 . ? . description=dust bd_35x67 . repeat_region 17823 17945 . ? . description=dust bd_35x67 . repeat_region 18138 18225 . ? . description=dust bd_35x67 . repeat_region 18382 21268 . + . description=Harbinger3_TP bd_35x67 . repeat_region 19215 19850 . ? . description=dust bd_35x67 . repeat_region 21264 21413 . - . description=Harbinger3_TP bd_35x67 . exon 14286 14339 . - . ID=Thapsdraft1100.9;Parent=Thapsdraft1100;constitutive=1;rank=9 bd_35x67 . exon 14422 14458 . - . ID=Thapsdraft1100.8;Parent=Thapsdraft1100;constitutive=1;ensembl_end_phase=1;rank=8 bd_35x67 . exon 14540 14557 . - . ID=Thapsdraft1100.7;Parent=Thapsdraft1100;constitutive=1;rank=7 bd_35x67 . exon 14665 14703 . - . ID=Thapsdraft1100.6;Parent=Thapsdraft1100;constitutive=1;rank=6 bd_35x67 . exon 14793 14849 . - . ID=Thapsdraft1100.5;Parent=Thapsdraft1100;constitutive=1;rank=5 bd_35x67 . exon 14917 14973 . - . ID=Thapsdraft1100.4;Parent=Thapsdraft1100;constitutive=1;rank=4 bd_35x67 . exon 15044 15250 . - . ID=Thapsdraft1100.3;Parent=Thapsdraft1100;constitutive=1;rank=3 bd_35x67 . exon 15330 15386 . - . ID=Thapsdraft1100.2;Parent=Thapsdraft1100;constitutive=1;rank=2 bd_35x67 . exon 15463 15820 . - . ID=Thapsdraft1100.1;Parent=Thapsdraft1100;constitutive=1;ensembl_end_phase=1;rank=1 bd_35x67 ensembl protein_coding_gene 17302 17601 . + . ID=Thapsdraft518;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_35x67 ensembl transcript 17302 17601 . + . ID=Thapsdraft518;Parent=Thapsdraft518;biotype=protein_coding;logic_name=jgi_thaps3 bd_35x67 . CDS 17302 17601 . + 0 ID=Thapsdraft518;Parent=Thapsdraft518;rank=1 bd_35x67 . exon 17302 17601 . + . ID=Thapsdraft518.1;Parent=Thapsdraft518;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_2x100 1 21525 bd_2x100 . repeat_region 1 1650 . - . description=MuDR2_TP bd_2x100 . repeat_region 1370 1439 . ? . description=trf bd_2x100 . repeat_region 1651 1715 . + . description=Copia6LTR_TP bd_2x100 . repeat_region 1735 1742 . ? . description=dust bd_2x100 ensembl protein_coding_gene 2528 3436 . - . ID=Thapsdraft1747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_2x100 ensembl transcript 2528 3436 . - . ID=Thapsdraft1747;Parent=Thapsdraft1747;biotype=protein_coding;logic_name=jgi_thaps3 bd_2x100 . CDS 2528 2624 . - 0 ID=Thapsdraft1747;Parent=Thapsdraft1747;rank=3 bd_2x100 . exon 2528 2624 . - . ID=Thapsdraft1747.3;Parent=Thapsdraft1747;constitutive=1;ensembl_end_phase=1;rank=3 bd_2x100 . CDS 2779 3356 . - 0 ID=Thapsdraft1747;Parent=Thapsdraft1747;rank=2 bd_2x100 . exon 2779 3356 . - . ID=Thapsdraft1747.2;Parent=Thapsdraft1747;constitutive=1;ensembl_end_phase=2;rank=2 bd_2x100 . CDS 3398 3436 . - 0 ID=Thapsdraft1747;Parent=Thapsdraft1747;rank=1 bd_2x100 . exon 3398 3436 . - . ID=Thapsdraft1747.1;Parent=Thapsdraft1747;constitutive=1;rank=1 bd_2x100 ensembl protein_coding_gene 4844 6160 . - . ID=Thapsdraft1748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_2x100 ensembl transcript 4844 6160 . - . ID=Thapsdraft1748;Parent=Thapsdraft1748;biotype=protein_coding;logic_name=jgi_thaps3 bd_2x100 . CDS 4844 5368 . - 0 ID=Thapsdraft1748;Parent=Thapsdraft1748;rank=2 bd_2x100 . exon 4844 5368 . - . ID=Thapsdraft1748.2;Parent=Thapsdraft1748;constitutive=1;rank=2 bd_2x100 . CDS 5441 6160 . - 0 ID=Thapsdraft1748;Parent=Thapsdraft1748;rank=1 bd_2x100 . exon 5441 6160 . - . ID=Thapsdraft1748.1;Parent=Thapsdraft1748;constitutive=1;rank=1 bd_2x100 ensembl protein_coding_gene 6500 8895 . + . ID=Thapsdraft1749;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_2x100 ensembl transcript 6500 8895 . + . ID=Thapsdraft1749;Parent=Thapsdraft1749;biotype=protein_coding;logic_name=jgi_thaps3 bd_2x100 . CDS 6500 7261 . + 0 ID=Thapsdraft1749;Parent=Thapsdraft1749;rank=1 bd_2x100 . exon 6500 7261 . + . ID=Thapsdraft1749.1;Parent=Thapsdraft1749;constitutive=1;rank=1 bd_2x100 . CDS 7356 8663 . + 0 ID=Thapsdraft1749;Parent=Thapsdraft1749;rank=2 bd_2x100 . CDS 8761 8895 . + 0 ID=Thapsdraft1749;Parent=Thapsdraft1749;rank=3 bd_2x100 . repeat_region 10465 10640 . - . description=Copia3LTR_TP bd_2x100 . repeat_region 10641 13062 . - . description=Copia3I_TP bd_2x100 . repeat_region 14150 17580 . - . description=Copia6I_TP bd_2x100 . exon 7356 8663 . + . ID=Thapsdraft1749.2;Parent=Thapsdraft1749;constitutive=1;rank=2 bd_2x100 . exon 8761 8895 . + . ID=Thapsdraft1749.3;Parent=Thapsdraft1749;constitutive=1;rank=3 bd_2x100 ensembl gene 10747 11204 . - . ID=Thapsdraft630;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 bd_2x100 ensembl transcript 10747 11204 . - . ID=Thapsdraft630;Parent=Thapsdraft630;biotype=nontranslating_CDS;logic_name=jgi_thaps3 bd_2x100 . exon 10747 11204 . - . ID=Thapsdraft630.1;Parent=Thapsdraft630;constitutive=1;ensembl_end_phase=2;rank=1 bd_2x100 ensembl gene 14325 14732 . - . ID=Thapsdraft632;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 bd_2x100 ensembl transcript 14325 14732 . - . ID=Thapsdraft632;Parent=Thapsdraft632;biotype=nontranslating_CDS;logic_name=jgi_thaps3 bd_2x100 . exon 14325 14732 . - . ID=Thapsdraft632.1;Parent=Thapsdraft632;constitutive=1;rank=1 bd_2x100 . repeat_region 20219 20307 . + . description=PtCopiaLikeTe2 bd_2x100 ensembl protein_coding_gene 18124 20136 . + . ID=Thapsdraft633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_2x100 ensembl transcript 18124 20136 . + . ID=Thapsdraft633;Parent=Thapsdraft633;biotype=protein_coding;logic_name=jgi_thaps3 bd_2x100 . CDS 18124 19371 . + 0 ID=Thapsdraft633;Parent=Thapsdraft633;rank=1 bd_2x100 . exon 18124 19371 . + . ID=Thapsdraft633.1;Parent=Thapsdraft633;constitutive=1;rank=1 bd_2x100 . CDS 19393 19593 . + 0 ID=Thapsdraft633;Parent=Thapsdraft633;rank=2 bd_2x100 . exon 19393 19593 . + . ID=Thapsdraft633.2;Parent=Thapsdraft633;constitutive=1;rank=2 bd_2x100 . CDS 20095 20136 . + 0 ID=Thapsdraft633;Parent=Thapsdraft633;rank=3 bd_2x100 . exon 20095 20136 . + . ID=Thapsdraft633.3;Parent=Thapsdraft633;constitutive=1;rank=3 ##gff-version 3 ##sequence-region bd_22x7 1 23186 bd_22x7 . repeat_region 1 249 . ? . description=trf bd_22x7 . repeat_region 1 249 . ? . description=dust bd_22x7 . repeat_region 251 373 . + . description=Harbinger2N_TP bd_22x7 . repeat_region 257 373 . ? . description=dust bd_22x7 . repeat_region 283 336 . ? . description=trf bd_22x7 . repeat_region 346 607 . ? . description=trf bd_22x7 . repeat_region 374 723 . + . description=Harbinger2N_TP bd_22x7 . repeat_region 418 479 . ? . description=dust bd_22x7 . repeat_region 443 496 . ? . description=trf bd_22x7 . repeat_region 545 668 . ? . description=dust bd_22x7 . repeat_region 560 723 . ? . description=trf bd_22x7 . repeat_region 566 723 . ? . description=trf bd_22x7 . repeat_region 572 723 . ? . description=trf bd_22x7 . repeat_region 1018 1025 . ? . description=dust bd_22x7 . repeat_region 1150 1157 . ? . description=dust bd_22x7 . repeat_region 1819 1945 . ? . description=trf bd_22x7 . repeat_region 1819 1946 . ? . description=trf bd_22x7 . repeat_region 1825 1952 . ? . description=dust bd_22x7 . repeat_region 2037 2076 . ? . description=trf bd_22x7 . repeat_region 2679 2686 . ? . description=dust bd_22x7 . repeat_region 3345 3484 . ? . description=dust bd_22x7 . repeat_region 3351 3477 . ? . description=trf bd_22x7 . repeat_region 3351 3478 . ? . description=trf bd_22x7 . repeat_region 3569 3608 . ? . description=trf bd_22x7 . repeat_region 3794 3854 . ? . description=trf bd_22x7 . repeat_region 4237 4245 . ? . description=dust bd_22x7 . repeat_region 5223 5231 . ? . description=dust bd_22x7 . repeat_region 6348 6361 . ? . description=dust bd_22x7 ensembl protein_coding_gene 6692 9682 . + . ID=Thapsdraft1667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_22x7 ensembl transcript 6692 9682 . + . ID=Thapsdraft1667;Parent=Thapsdraft1667;biotype=protein_coding;logic_name=jgi_thaps3 bd_22x7 . CDS 6692 7043 . + 0 ID=Thapsdraft1667;Parent=Thapsdraft1667;rank=1 bd_22x7 . exon 6692 7043 . + . ID=Thapsdraft1667.1;Parent=Thapsdraft1667;constitutive=1;ensembl_end_phase=1;rank=1 bd_22x7 . CDS 7130 8563 . + 0 ID=Thapsdraft1667;Parent=Thapsdraft1667;rank=2 bd_22x7 . exon 7130 8563 . + . ID=Thapsdraft1667.2;Parent=Thapsdraft1667;constitutive=1;rank=2 bd_22x7 . CDS 8645 9219 . + 0 ID=Thapsdraft1667;Parent=Thapsdraft1667;rank=3 bd_22x7 . CDS 9308 9682 . + 0 ID=Thapsdraft1667;Parent=Thapsdraft1667;rank=4 bd_22x7 . exon 8645 9219 . + . ID=Thapsdraft1667.3;Parent=Thapsdraft1667;constitutive=1;ensembl_end_phase=2;rank=3 bd_22x7 . exon 9308 9682 . + . ID=Thapsdraft1667.4;Parent=Thapsdraft1667;constitutive=1;rank=4 bd_22x7 ensembl protein_coding_gene 13210 14252 . - . ID=Thapsdraft1869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_22x7 ensembl transcript 13210 14252 . - . ID=Thapsdraft1869;Parent=Thapsdraft1869;biotype=protein_coding;logic_name=jgi_thaps3 bd_22x7 . CDS 13210 13380 . - 0 ID=Thapsdraft1869;Parent=Thapsdraft1869;rank=3 bd_22x7 . exon 13210 13380 . - . ID=Thapsdraft1869.3;Parent=Thapsdraft1869;constitutive=1;rank=3 bd_22x7 . CDS 13557 13848 . - 0 ID=Thapsdraft1869;Parent=Thapsdraft1869;rank=2 bd_22x7 . exon 13557 13848 . - . ID=Thapsdraft1869.2;Parent=Thapsdraft1869;constitutive=1;ensembl_end_phase=1;rank=2 bd_22x7 . CDS 13954 14252 . - 0 ID=Thapsdraft1869;Parent=Thapsdraft1869;rank=1 bd_22x7 . exon 13954 14252 . - . ID=Thapsdraft1869.1;Parent=Thapsdraft1869;constitutive=1;ensembl_end_phase=2;rank=1 bd_22x7 ensembl protein_coding_gene 14728 15822 . + . ID=Thapsdraft1870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_22x7 ensembl transcript 14728 15822 . + . ID=Thapsdraft1870;Parent=Thapsdraft1870;biotype=protein_coding;logic_name=jgi_thaps3 bd_22x7 . CDS 14728 14824 . + 0 ID=Thapsdraft1870;Parent=Thapsdraft1870;rank=1 bd_22x7 . exon 14728 14824 . + . ID=Thapsdraft1870.1;Parent=Thapsdraft1870;constitutive=1;ensembl_end_phase=1;rank=1 bd_22x7 . CDS 14939 15090 . + 0 ID=Thapsdraft1870;Parent=Thapsdraft1870;rank=2 bd_22x7 . exon 14939 15090 . + . ID=Thapsdraft1870.2;Parent=Thapsdraft1870;constitutive=1;ensembl_end_phase=2;rank=2 bd_22x7 . CDS 15241 15822 . + 0 ID=Thapsdraft1870;Parent=Thapsdraft1870;rank=3 bd_22x7 . exon 15241 15822 . + . ID=Thapsdraft1870.3;Parent=Thapsdraft1870;constitutive=1;rank=3 bd_22x7 . repeat_region 15686 15748 . ? . description=trf bd_22x7 . repeat_region 15891 16042 . - . description=Copia1LTR_TP bd_22x7 . repeat_region 18612 18766 . ? . description=trf bd_22x7 ensembl protein_coding_gene 18291 20299 . - . ID=Thapsdraft1871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_22x7 ensembl transcript 18291 20299 . - . ID=Thapsdraft1871;Parent=Thapsdraft1871;biotype=protein_coding;logic_name=jgi_thaps3 bd_22x7 . CDS 18291 18343 . - 0 ID=Thapsdraft1871;Parent=Thapsdraft1871;rank=4 bd_22x7 . exon 18291 18343 . - . ID=Thapsdraft1871.4;Parent=Thapsdraft1871;constitutive=1;ensembl_end_phase=2;rank=4 bd_22x7 . CDS 18435 18863 . - 0 ID=Thapsdraft1871;Parent=Thapsdraft1871;rank=3 bd_22x7 . exon 18435 18863 . - . ID=Thapsdraft1871.3;Parent=Thapsdraft1871;constitutive=1;rank=3 bd_22x7 . CDS 18935 19969 . - 0 ID=Thapsdraft1871;Parent=Thapsdraft1871;rank=2 bd_22x7 . exon 18935 19969 . - . ID=Thapsdraft1871.2;Parent=Thapsdraft1871;constitutive=1;rank=2 bd_22x7 . CDS 20068 20299 . - 0 ID=Thapsdraft1871;Parent=Thapsdraft1871;rank=1 bd_22x7 . exon 20068 20299 . - . ID=Thapsdraft1871.1;Parent=Thapsdraft1871;constitutive=1;ensembl_end_phase=1;rank=1 bd_22x7 ensembl protein_coding_gene 21583 22616 . + . ID=Thapsdraft453;biotype=protein_coding;description=Peroxisomal membrane protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_22x7 ensembl transcript 21583 22616 . + . ID=Thapsdraft453;Parent=Thapsdraft453;biotype=protein_coding;logic_name=jgi_thaps3 bd_22x7 . CDS 21583 22268 . + 0 ID=Thapsdraft453;Parent=Thapsdraft453;rank=1 bd_22x7 . exon 21583 22268 . + . ID=Thapsdraft453.1;Parent=Thapsdraft453;constitutive=1;ensembl_end_phase=2;rank=1 bd_22x7 . CDS 22332 22616 . + 0 ID=Thapsdraft453;Parent=Thapsdraft453;rank=2 bd_22x7 . exon 22332 22616 . + . ID=Thapsdraft453.2;Parent=Thapsdraft453;constitutive=1;rank=2 ##gff-version 3 ##sequence-region bd_10x65 1 25410 bd_10x65 . repeat_region 5913 6003 . ? . description=dust bd_10x65 . repeat_region 7956 8090 . + . description=scaffold_19_187_3_511532_512388 bd_10x65 ensembl protein_coding_gene 8079 9722 . + . ID=Thapsdraft1652;biotype=protein_coding;description=ABC-transporter family protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE79];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 8079 9722 . + . ID=Thapsdraft1652;Parent=Thapsdraft1652;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 8079 9722 . + 0 ID=Thapsdraft1652;Parent=Thapsdraft1652;rank=1 bd_10x65 . exon 8079 9722 . + . ID=Thapsdraft1652.1;Parent=Thapsdraft1652;constitutive=1;rank=1 bd_10x65 ensembl protein_coding_gene 169 933 . - . ID=Thapsdraft1801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE73];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 169 933 . - . ID=Thapsdraft1801;Parent=Thapsdraft1801;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 169 933 . - 0 ID=Thapsdraft1801;Parent=Thapsdraft1801;rank=1 bd_10x65 . exon 169 933 . - . ID=Thapsdraft1801.1;Parent=Thapsdraft1801;constitutive=1;rank=1 bd_10x65 ensembl protein_coding_gene 1429 2190 . - . ID=Thapsdraft1802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE76];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 1429 2190 . - . ID=Thapsdraft1802;Parent=Thapsdraft1802;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 1429 2190 . - 0 ID=Thapsdraft1802;Parent=Thapsdraft1802;rank=1 bd_10x65 . exon 1429 2190 . - . ID=Thapsdraft1802.1;Parent=Thapsdraft1802;constitutive=1;rank=1 bd_10x65 ensembl protein_coding_gene 3126 3947 . + . ID=Thapsdraft1803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE77];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 3126 3947 . + . ID=Thapsdraft1803;Parent=Thapsdraft1803;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 3126 3947 . + 0 ID=Thapsdraft1803;Parent=Thapsdraft1803;rank=1 bd_10x65 . exon 3126 3947 . + . ID=Thapsdraft1803.1;Parent=Thapsdraft1803;constitutive=1;rank=1 bd_10x65 ensembl protein_coding_gene 5324 5860 . - . ID=Thapsdraft196;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE78];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 5324 5860 . - . ID=Thapsdraft196;Parent=Thapsdraft196;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 5324 5860 . - 0 ID=Thapsdraft196;Parent=Thapsdraft196;rank=1 bd_10x65 . exon 5324 5860 . - . ID=Thapsdraft196.1;Parent=Thapsdraft196;constitutive=1;rank=1 bd_10x65 . repeat_region 11447 11515 . ? . description=trf bd_10x65 . repeat_region 16187 16220 . ? . description=trf bd_10x65 ensembl protein_coding_gene 12446 13874 . - . ID=Thapsdraft1806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE80];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 12446 13874 . - . ID=Thapsdraft1806;Parent=Thapsdraft1806;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 12446 13345 . - 0 ID=Thapsdraft1806;Parent=Thapsdraft1806;rank=2 bd_10x65 . exon 12446 13345 . - . ID=Thapsdraft1806.2;Parent=Thapsdraft1806;constitutive=1;rank=2 bd_10x65 . CDS 13467 13874 . - 0 ID=Thapsdraft1806;Parent=Thapsdraft1806;rank=1 bd_10x65 . exon 13467 13874 . - . ID=Thapsdraft1806.1;Parent=Thapsdraft1806;constitutive=1;rank=1 bd_10x65 ensembl protein_coding_gene 15964 17950 . + . ID=Thapsdraft1807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE81];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 15964 17950 . + . ID=Thapsdraft1807;Parent=Thapsdraft1807;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 15964 16371 . + 0 ID=Thapsdraft1807;Parent=Thapsdraft1807;rank=1 bd_10x65 . exon 15964 16371 . + . ID=Thapsdraft1807.1;Parent=Thapsdraft1807;constitutive=1;rank=1 bd_10x65 . CDS 16804 16971 . + 0 ID=Thapsdraft1807;Parent=Thapsdraft1807;rank=2 bd_10x65 . exon 16804 16971 . + . ID=Thapsdraft1807.2;Parent=Thapsdraft1807;constitutive=1;rank=2 bd_10x65 . CDS 17108 17950 . + 0 ID=Thapsdraft1807;Parent=Thapsdraft1807;rank=3 bd_10x65 ensembl protein_coding_gene 20514 21362 . - . ID=Thapsdraft1173;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE83];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 20514 21362 . - . ID=Thapsdraft1173;Parent=Thapsdraft1173;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 20514 21362 . - 0 ID=Thapsdraft1173;Parent=Thapsdraft1173;rank=1 bd_10x65 . exon 20514 21362 . - . ID=Thapsdraft1173.1;Parent=Thapsdraft1173;constitutive=1;rank=1 bd_10x65 . exon 17108 17950 . + . ID=Thapsdraft1807.3;Parent=Thapsdraft1807;constitutive=1;rank=3 bd_10x65 ensembl protein_coding_gene 22401 23359 . + . ID=Thapsdraft1808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE84];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 22401 23359 . + . ID=Thapsdraft1808;Parent=Thapsdraft1808;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 22401 22522 . + 0 ID=Thapsdraft1808;Parent=Thapsdraft1808;rank=1 bd_10x65 . exon 22401 22522 . + . ID=Thapsdraft1808.1;Parent=Thapsdraft1808;constitutive=1;ensembl_end_phase=2;rank=1 bd_10x65 . CDS 22690 23359 . + 0 ID=Thapsdraft1808;Parent=Thapsdraft1808;rank=2 bd_10x65 . exon 22690 23359 . + . ID=Thapsdraft1808.2;Parent=Thapsdraft1808;constitutive=1;ensembl_end_phase=1;rank=2 bd_10x65 ensembl protein_coding_gene 18543 18947 . - . ID=Thapsdraft539;biotype=protein_coding;description=Outer arm dynein light chain LC6 and LC4-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE82];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 18543 18947 . - . ID=Thapsdraft539;Parent=Thapsdraft539;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 18543 18627 . - 0 ID=Thapsdraft539;Parent=Thapsdraft539;rank=3 bd_10x65 . exon 18543 18627 . - . ID=Thapsdraft539.3;Parent=Thapsdraft539;constitutive=1;ensembl_end_phase=1;rank=3 bd_10x65 . CDS 18716 18788 . - 0 ID=Thapsdraft539;Parent=Thapsdraft539;rank=2 bd_10x65 . exon 18716 18788 . - . ID=Thapsdraft539.2;Parent=Thapsdraft539;constitutive=1;ensembl_end_phase=1;rank=2 bd_10x65 . CDS 18866 18947 . - 0 ID=Thapsdraft539;Parent=Thapsdraft539;rank=1 bd_10x65 . exon 18866 18947 . - . ID=Thapsdraft539.1;Parent=Thapsdraft539;constitutive=1;ensembl_end_phase=1;rank=1 bd_10x65 ensembl protein_coding_gene 23666 24185 . - . ID=Thapsdraft753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE85];external_name=Thaps24712;logic_name=jgi_thaps3 bd_10x65 ensembl transcript 23666 24185 . - . ID=Thapsdraft753;Parent=Thapsdraft753;biotype=protein_coding;logic_name=jgi_thaps3 bd_10x65 . CDS 23666 23706 . - 0 ID=Thapsdraft753;Parent=Thapsdraft753;rank=2 bd_10x65 . exon 23666 23706 . - . ID=Thapsdraft753.2;Parent=Thapsdraft753;constitutive=1;ensembl_end_phase=2;rank=2 bd_10x65 . CDS 23744 24185 . - 0 ID=Thapsdraft753;Parent=Thapsdraft753;rank=1 bd_10x65 . exon 23744 24185 . - . ID=Thapsdraft753.1;Parent=Thapsdraft753;constitutive=1;ensembl_end_phase=1;rank=1 ##gff-version 3 ##sequence-region bd_1x7 1 26370 bd_1x7 . repeat_region 2337 2377 . ? . description=trf bd_1x7 . repeat_region 6594 6798 . - . description=Copia6I_TP bd_1x7 . repeat_region 7474 8437 . - . description=Copia6I_TP bd_1x7 ensembl protein_coding_gene 99 275 . + . ID=Thapsdraft1112;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_1x7 ensembl transcript 99 275 . + . ID=Thapsdraft1112;Parent=Thapsdraft1112;biotype=protein_coding;logic_name=jgi_thaps3 bd_1x7 . CDS 99 275 . + 0 ID=Thapsdraft1112;Parent=Thapsdraft1112;rank=1 bd_1x7 . exon 99 275 . + . ID=Thapsdraft1112.1;Parent=Thapsdraft1112;constitutive=1;rank=1 bd_1x7 ensembl protein_coding_gene 3020 4286 . + . ID=Thapsdraft616;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDX6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_1x7 ensembl transcript 3020 4286 . + . ID=Thapsdraft616;Parent=Thapsdraft616;biotype=protein_coding;logic_name=jgi_thaps3 bd_1x7 . CDS 3020 3887 . + 0 ID=Thapsdraft616;Parent=Thapsdraft616;rank=1 bd_1x7 . exon 3020 3887 . + . ID=Thapsdraft616.1;Parent=Thapsdraft616;constitutive=1;ensembl_end_phase=1;rank=1 bd_1x7 . CDS 3997 4286 . + 0 ID=Thapsdraft616;Parent=Thapsdraft616;rank=2 bd_1x7 . exon 3997 4286 . + . ID=Thapsdraft616.2;Parent=Thapsdraft616;constitutive=1;ensembl_end_phase=2;rank=2 bd_1x7 . repeat_region 10043 10147 . - . description=PtCopiaLikeTe2 bd_1x7 . repeat_region 12842 12993 . - . description=TE2b_TP bd_1x7 ensembl protein_coding_gene 15230 15384 . - . ID=Thapsdraft381;biotype=protein_coding;description=ATP synthase alpha chain [Source:UniProtKB/TrEMBL%3BAcc:B8LDX8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_1x7 ensembl transcript 15230 15384 . - . ID=Thapsdraft381;Parent=Thapsdraft381;biotype=protein_coding;logic_name=jgi_thaps3 bd_1x7 . CDS 15230 15384 . - 0 ID=Thapsdraft381;Parent=Thapsdraft381;rank=1 bd_1x7 . exon 15230 15384 . - . ID=Thapsdraft381.1;Parent=Thapsdraft381;constitutive=1;ensembl_end_phase=2;rank=1 bd_1x7 ensembl protein_coding_gene 13861 14829 . - . ID=Thapsdraft524;biotype=protein_coding;description=H-atpase subunit alpha [Source:UniProtKB/TrEMBL%3BAcc:B8LDX7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_1x7 ensembl transcript 13861 14829 . - . ID=Thapsdraft524;Parent=Thapsdraft524;biotype=protein_coding;logic_name=jgi_thaps3 bd_1x7 . CDS 13861 14829 . - 0 ID=Thapsdraft524;Parent=Thapsdraft524;rank=1 bd_1x7 . exon 13861 14829 . - . ID=Thapsdraft524.1;Parent=Thapsdraft524;constitutive=1;rank=1 bd_1x7 ensembl protein_coding_gene 15905 16789 . - . ID=Thapsdraft621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDX9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_1x7 ensembl transcript 15905 16789 . - . ID=Thapsdraft621;Parent=Thapsdraft621;biotype=protein_coding;logic_name=jgi_thaps3 bd_1x7 . CDS 15905 16789 . - 0 ID=Thapsdraft621;Parent=Thapsdraft621;rank=1 bd_1x7 . exon 15905 16789 . - . ID=Thapsdraft621.1;Parent=Thapsdraft621;constitutive=1;rank=1 bd_1x7 ensembl protein_coding_gene 17095 20323 . - . ID=Thapsdraft622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_1x7 ensembl transcript 17095 20323 . - . ID=Thapsdraft622;Parent=Thapsdraft622;biotype=protein_coding;logic_name=jgi_thaps3 bd_1x7 . CDS 17095 19770 . - 0 ID=Thapsdraft622;Parent=Thapsdraft622;rank=2 bd_1x7 . exon 17095 19770 . - . ID=Thapsdraft622.2;Parent=Thapsdraft622;constitutive=1;rank=2 bd_1x7 . CDS 19985 20323 . - 0 ID=Thapsdraft622;Parent=Thapsdraft622;rank=1 bd_1x7 . repeat_region 24223 24244 . ? . description=dust bd_1x7 ensembl protein_coding_gene 24437 25750 . + . ID=Thapsdraft208;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_1x7 ensembl transcript 24437 25750 . + . ID=Thapsdraft208;Parent=Thapsdraft208;biotype=protein_coding;logic_name=jgi_thaps3 bd_1x7 . CDS 24437 24552 . + 0 ID=Thapsdraft208;Parent=Thapsdraft208;rank=1 bd_1x7 . exon 24437 24552 . + . ID=Thapsdraft208.1;Parent=Thapsdraft208;constitutive=1;ensembl_end_phase=2;rank=1 bd_1x7 . CDS 24971 25032 . + 0 ID=Thapsdraft208;Parent=Thapsdraft208;rank=2 bd_1x7 . exon 24971 25032 . + . ID=Thapsdraft208.2;Parent=Thapsdraft208;constitutive=1;ensembl_end_phase=2;rank=2 bd_1x7 . CDS 25214 25375 . + 0 ID=Thapsdraft208;Parent=Thapsdraft208;rank=3 bd_1x7 . exon 25214 25375 . + . ID=Thapsdraft208.3;Parent=Thapsdraft208;constitutive=1;rank=3 bd_1x7 . CDS 25533 25750 . + 0 ID=Thapsdraft208;Parent=Thapsdraft208;rank=4 bd_1x7 . exon 25533 25750 . + . ID=Thapsdraft208.4;Parent=Thapsdraft208;constitutive=1;ensembl_end_phase=2;rank=4 bd_1x7 . exon 19985 20323 . - . ID=Thapsdraft622.1;Parent=Thapsdraft622;constitutive=1;rank=1 bd_1x7 ensembl protein_coding_gene 21508 22023 . + . ID=Thapsdraft623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_1x7 ensembl transcript 21508 22023 . + . ID=Thapsdraft623;Parent=Thapsdraft623;biotype=protein_coding;logic_name=jgi_thaps3 bd_1x7 . CDS 21508 21709 . + 0 ID=Thapsdraft623;Parent=Thapsdraft623;rank=1 bd_1x7 . exon 21508 21709 . + . ID=Thapsdraft623.1;Parent=Thapsdraft623;constitutive=1;ensembl_end_phase=1;rank=1 bd_1x7 . CDS 21851 22023 . + 0 ID=Thapsdraft623;Parent=Thapsdraft623;rank=2 bd_1x7 . exon 21851 22023 . + . ID=Thapsdraft623.2;Parent=Thapsdraft623;constitutive=1;ensembl_end_phase=2;rank=2 bd_1x7 ensembl protein_coding_gene 22265 23410 . - . ID=Thapsdraft624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDY2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_1x7 ensembl transcript 22265 23410 . - . ID=Thapsdraft624;Parent=Thapsdraft624;biotype=protein_coding;logic_name=jgi_thaps3 bd_1x7 . CDS 22265 23410 . - 0 ID=Thapsdraft624;Parent=Thapsdraft624;rank=1 bd_1x7 . exon 22265 23410 . - . ID=Thapsdraft624.1;Parent=Thapsdraft624;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_14x19 1 30734 bd_14x19 ensembl protein_coding_gene 3277 5234 . - . ID=Thapsdraft811;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_14x19 ensembl transcript 3277 5234 . - . ID=Thapsdraft811;Parent=Thapsdraft811;biotype=protein_coding;logic_name=jgi_thaps3 bd_14x19 . CDS 3277 5234 . - 0 ID=Thapsdraft811;Parent=Thapsdraft811;rank=1 bd_14x19 . exon 3277 5234 . - . ID=Thapsdraft811.1;Parent=Thapsdraft811;constitutive=1;ensembl_end_phase=2;rank=1 bd_14x19 ensembl protein_coding_gene 5654 7707 . + . ID=Thapsdraft812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_14x19 ensembl transcript 5654 7707 . + . ID=Thapsdraft812;Parent=Thapsdraft812;biotype=protein_coding;logic_name=jgi_thaps3 bd_14x19 . CDS 5654 5771 . + 0 ID=Thapsdraft812;Parent=Thapsdraft812;rank=1 bd_14x19 . exon 5654 5771 . + . ID=Thapsdraft812.1;Parent=Thapsdraft812;constitutive=1;ensembl_end_phase=1;rank=1 bd_14x19 . CDS 5827 5912 . + 0 ID=Thapsdraft812;Parent=Thapsdraft812;rank=2 bd_14x19 . exon 5827 5912 . + . ID=Thapsdraft812.2;Parent=Thapsdraft812;constitutive=1;ensembl_end_phase=2;rank=2 bd_14x19 . CDS 6095 6395 . + 0 ID=Thapsdraft812;Parent=Thapsdraft812;rank=3 bd_14x19 . exon 6095 6395 . + . ID=Thapsdraft812.3;Parent=Thapsdraft812;constitutive=1;ensembl_end_phase=1;rank=3 bd_14x19 . CDS 6417 7293 . + 0 ID=Thapsdraft812;Parent=Thapsdraft812;rank=4 bd_14x19 . exon 6417 7293 . + . ID=Thapsdraft812.4;Parent=Thapsdraft812;constitutive=1;ensembl_end_phase=1;rank=4 bd_14x19 . CDS 7338 7707 . + 0 ID=Thapsdraft812;Parent=Thapsdraft812;rank=5 bd_14x19 . exon 7338 7707 . + . ID=Thapsdraft812.5;Parent=Thapsdraft812;constitutive=1;ensembl_end_phase=1;rank=5 bd_14x19 . repeat_region 12438 12445 . ? . description=dust bd_14x19 ensembl protein_coding_gene 8327 17757 . + . ID=Thapsdraft813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_14x19 ensembl transcript 8327 17757 . + . ID=Thapsdraft813;Parent=Thapsdraft813;biotype=protein_coding;logic_name=jgi_thaps3 bd_14x19 . CDS 8327 9007 . + 0 ID=Thapsdraft813;Parent=Thapsdraft813;rank=1 bd_14x19 . exon 8327 9007 . + . ID=Thapsdraft813.1;Parent=Thapsdraft813;constitutive=1;rank=1 bd_14x19 . CDS 9034 11083 . + 0 ID=Thapsdraft813;Parent=Thapsdraft813;rank=2 bd_14x19 . exon 9034 11083 . + . ID=Thapsdraft813.2;Parent=Thapsdraft813;constitutive=1;ensembl_end_phase=1;rank=2 bd_14x19 . CDS 11119 11880 . + 0 ID=Thapsdraft813;Parent=Thapsdraft813;rank=3 bd_14x19 . exon 11119 11880 . + . ID=Thapsdraft813.3;Parent=Thapsdraft813;constitutive=1;rank=3 bd_14x19 . CDS 11910 12202 . + 0 ID=Thapsdraft813;Parent=Thapsdraft813;rank=4 bd_14x19 . exon 11910 12202 . + . ID=Thapsdraft813.4;Parent=Thapsdraft813;constitutive=1;ensembl_end_phase=2;rank=4 bd_14x19 . CDS 12640 14709 . + 0 ID=Thapsdraft813;Parent=Thapsdraft813;rank=5 bd_14x19 . exon 12640 14709 . + . ID=Thapsdraft813.5;Parent=Thapsdraft813;constitutive=1;rank=5 bd_14x19 . CDS 15071 15331 . + 0 ID=Thapsdraft813;Parent=Thapsdraft813;rank=6 bd_14x19 . exon 15071 15331 . + . ID=Thapsdraft813.6;Parent=Thapsdraft813;constitutive=1;rank=6 bd_14x19 . CDS 15383 15509 . + 0 ID=Thapsdraft813;Parent=Thapsdraft813;rank=7 bd_14x19 . CDS 15557 16656 . + 0 ID=Thapsdraft813;Parent=Thapsdraft813;rank=8 bd_14x19 . CDS 16681 17757 . + 0 ID=Thapsdraft813;Parent=Thapsdraft813;rank=9 bd_14x19 . repeat_region 20406 20594 . + . description=Copia4LTR_TP bd_14x19 . repeat_region 20596 25646 . + . description=Copia4I_TP bd_14x19 . exon 15383 15509 . + . ID=Thapsdraft813.7;Parent=Thapsdraft813;constitutive=1;ensembl_end_phase=1;rank=7 bd_14x19 . exon 15557 16656 . + . ID=Thapsdraft813.8;Parent=Thapsdraft813;constitutive=1;ensembl_end_phase=2;rank=8 bd_14x19 . exon 16681 17757 . + . ID=Thapsdraft813.9;Parent=Thapsdraft813;constitutive=1;rank=9 bd_14x19 . repeat_region 25975 26038 . ? . description=trf bd_14x19 . repeat_region 25991 26088 . ? . description=trf bd_14x19 . repeat_region 26018 26077 . ? . description=trf bd_14x19 . repeat_region 27224 27520 . - . description=TE2c_TP bd_14x19 . repeat_region 27793 27935 . + . description=Copia7I_TP bd_14x19 . repeat_region 27989 28115 . + . description=PtCopiaLikeTe2 bd_14x19 . repeat_region 29806 30734 . + . description=Copia7I_TP bd_14x19 ensembl protein_coding_gene 28207 29220 . + . ID=Thapsdraft815;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_14x19 ensembl transcript 28207 29220 . + . ID=Thapsdraft815;Parent=Thapsdraft815;biotype=protein_coding;logic_name=jgi_thaps3 bd_14x19 . CDS 28207 29220 . + 0 ID=Thapsdraft815;Parent=Thapsdraft815;rank=1 bd_14x19 . exon 28207 29220 . + . ID=Thapsdraft815.1;Parent=Thapsdraft815;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_7x47 1 37633 bd_7x47 . repeat_region 1 209 . ? . description=trf bd_7x47 . repeat_region 1 209 . ? . description=dust bd_7x47 ensembl protein_coding_gene 6039 7357 . - . ID=Thapsdraft1154;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE40];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 6039 7357 . - . ID=Thapsdraft1154;Parent=Thapsdraft1154;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 6039 6218 . - 0 ID=Thapsdraft1154;Parent=Thapsdraft1154;rank=4 bd_7x47 . exon 6039 6218 . - . ID=Thapsdraft1154.4;Parent=Thapsdraft1154;constitutive=1;rank=4 bd_7x47 . CDS 6307 6361 . - 0 ID=Thapsdraft1154;Parent=Thapsdraft1154;rank=3 bd_7x47 . exon 6307 6361 . - . ID=Thapsdraft1154.3;Parent=Thapsdraft1154;constitutive=1;ensembl_end_phase=1;rank=3 bd_7x47 . CDS 6457 6944 . - 0 ID=Thapsdraft1154;Parent=Thapsdraft1154;rank=2 bd_7x47 . exon 6457 6944 . - . ID=Thapsdraft1154.2;Parent=Thapsdraft1154;constitutive=1;ensembl_end_phase=2;rank=2 bd_7x47 . CDS 7061 7357 . - 0 ID=Thapsdraft1154;Parent=Thapsdraft1154;rank=1 bd_7x47 . exon 7061 7357 . - . ID=Thapsdraft1154.1;Parent=Thapsdraft1154;constitutive=1;rank=1 bd_7x47 ensembl protein_coding_gene 8183 9437 . + . ID=Thapsdraft1645;biotype=protein_coding;description=Triose or hexose phosphate/phosphate translocator [Source:UniProtKB/TrEMBL%3BAcc:B8LE41];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 8183 9437 . + . ID=Thapsdraft1645;Parent=Thapsdraft1645;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 8183 8230 . + 0 ID=Thapsdraft1645;Parent=Thapsdraft1645;rank=1 bd_7x47 . exon 8183 8230 . + . ID=Thapsdraft1645.1;Parent=Thapsdraft1645;constitutive=1;rank=1 bd_7x47 . CDS 8329 8369 . + 0 ID=Thapsdraft1645;Parent=Thapsdraft1645;rank=2 bd_7x47 . exon 8329 8369 . + . ID=Thapsdraft1645.2;Parent=Thapsdraft1645;constitutive=1;ensembl_end_phase=2;rank=2 bd_7x47 . CDS 8448 8632 . + 0 ID=Thapsdraft1645;Parent=Thapsdraft1645;rank=3 bd_7x47 . exon 8448 8632 . + . ID=Thapsdraft1645.3;Parent=Thapsdraft1645;constitutive=1;ensembl_end_phase=2;rank=3 bd_7x47 . CDS 8785 9437 . + 0 ID=Thapsdraft1645;Parent=Thapsdraft1645;rank=4 bd_7x47 . exon 8785 9437 . + . ID=Thapsdraft1645.4;Parent=Thapsdraft1645;constitutive=1;ensembl_end_phase=2;rank=4 bd_7x47 ensembl protein_coding_gene 1507 3720 . + . ID=Thapsdraft1777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE38];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 1507 3720 . + . ID=Thapsdraft1777;Parent=Thapsdraft1777;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 1507 3720 . + 0 ID=Thapsdraft1777;Parent=Thapsdraft1777;rank=1 bd_7x47 . exon 1507 3720 . + . ID=Thapsdraft1777.1;Parent=Thapsdraft1777;constitutive=1;rank=1 bd_7x47 ensembl protein_coding_gene 3812 5097 . - . ID=Thapsdraft1778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE39];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 3812 5097 . - . ID=Thapsdraft1778;Parent=Thapsdraft1778;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 3812 4329 . - 0 ID=Thapsdraft1778;Parent=Thapsdraft1778;rank=3 bd_7x47 . exon 3812 4329 . - . ID=Thapsdraft1778.3;Parent=Thapsdraft1778;constitutive=1;ensembl_end_phase=2;rank=3 bd_7x47 . CDS 4428 4742 . - 0 ID=Thapsdraft1778;Parent=Thapsdraft1778;rank=2 bd_7x47 . exon 4428 4742 . - . ID=Thapsdraft1778.2;Parent=Thapsdraft1778;constitutive=1;rank=2 bd_7x47 . CDS 4899 5097 . - 0 ID=Thapsdraft1778;Parent=Thapsdraft1778;rank=1 bd_7x47 . exon 4899 5097 . - . ID=Thapsdraft1778.1;Parent=Thapsdraft1778;constitutive=1;ensembl_end_phase=1;rank=1 bd_7x47 ensembl protein_coding_gene 342 938 . - . ID=Thapsdraft696;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE37];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 342 938 . - . ID=Thapsdraft696;Parent=Thapsdraft696;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 342 444 . - 0 ID=Thapsdraft696;Parent=Thapsdraft696;rank=3 bd_7x47 . exon 342 444 . - . ID=Thapsdraft696.3;Parent=Thapsdraft696;constitutive=1;ensembl_end_phase=1;rank=3 bd_7x47 . CDS 550 635 . - 0 ID=Thapsdraft696;Parent=Thapsdraft696;rank=2 bd_7x47 . exon 550 635 . - . ID=Thapsdraft696.2;Parent=Thapsdraft696;constitutive=1;ensembl_end_phase=2;rank=2 bd_7x47 . CDS 768 938 . - 0 ID=Thapsdraft696;Parent=Thapsdraft696;rank=1 bd_7x47 . exon 768 938 . - . ID=Thapsdraft696.1;Parent=Thapsdraft696;constitutive=1;rank=1 bd_7x47 ensembl protein_coding_gene 11568 14678 . + . ID=Thapsdraft1983;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE42];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 11568 14678 . + . ID=Thapsdraft1983;Parent=Thapsdraft1983;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 11568 12168 . + 0 ID=Thapsdraft1983;Parent=Thapsdraft1983;rank=1 bd_7x47 . exon 11568 12168 . + . ID=Thapsdraft1983.1;Parent=Thapsdraft1983;constitutive=1;ensembl_end_phase=1;rank=1 bd_7x47 . CDS 12322 12472 . + 0 ID=Thapsdraft1983;Parent=Thapsdraft1983;rank=2 bd_7x47 . exon 12322 12472 . + . ID=Thapsdraft1983.2;Parent=Thapsdraft1983;constitutive=1;ensembl_end_phase=1;rank=2 bd_7x47 . CDS 12851 13228 . + 0 ID=Thapsdraft1983;Parent=Thapsdraft1983;rank=3 bd_7x47 . exon 12851 13228 . + . ID=Thapsdraft1983.3;Parent=Thapsdraft1983;constitutive=1;rank=3 bd_7x47 . CDS 13334 13593 . + 0 ID=Thapsdraft1983;Parent=Thapsdraft1983;rank=4 bd_7x47 . exon 13334 13593 . + . ID=Thapsdraft1983.4;Parent=Thapsdraft1983;constitutive=1;ensembl_end_phase=2;rank=4 bd_7x47 . CDS 13702 13986 . + 0 ID=Thapsdraft1983;Parent=Thapsdraft1983;rank=5 bd_7x47 . exon 13702 13986 . + . ID=Thapsdraft1983.5;Parent=Thapsdraft1983;constitutive=1;rank=5 bd_7x47 . CDS 14071 14241 . + 0 ID=Thapsdraft1983;Parent=Thapsdraft1983;rank=6 bd_7x47 . exon 14071 14241 . + . ID=Thapsdraft1983.6;Parent=Thapsdraft1983;constitutive=1;rank=6 bd_7x47 . CDS 14335 14678 . + 0 ID=Thapsdraft1983;Parent=Thapsdraft1983;rank=7 bd_7x47 . exon 14335 14678 . + . ID=Thapsdraft1983.7;Parent=Thapsdraft1983;constitutive=1;ensembl_end_phase=2;rank=7 bd_7x47 ensembl protein_coding_gene 16012 17438 . + . ID=Thapsdraft705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE43];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 16012 17438 . + . ID=Thapsdraft705;Parent=Thapsdraft705;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 16012 17333 . + 0 ID=Thapsdraft705;Parent=Thapsdraft705;rank=1 bd_7x47 . exon 16012 17333 . + . ID=Thapsdraft705.1;Parent=Thapsdraft705;constitutive=1;ensembl_end_phase=2;rank=1 bd_7x47 . CDS 17369 17438 . + 0 ID=Thapsdraft705;Parent=Thapsdraft705;rank=2 bd_7x47 . exon 17369 17438 . + . ID=Thapsdraft705.2;Parent=Thapsdraft705;constitutive=1;ensembl_end_phase=1;rank=2 bd_7x47 ensembl protein_coding_gene 17779 19448 . + . ID=Thapsdraft706;biotype=protein_coding;description=MFS transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LE44];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 17779 19448 . + . ID=Thapsdraft706;Parent=Thapsdraft706;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 17779 17829 . + 0 ID=Thapsdraft706;Parent=Thapsdraft706;rank=1 bd_7x47 . exon 17779 17829 . + . ID=Thapsdraft706.1;Parent=Thapsdraft706;constitutive=1;rank=1 bd_7x47 . CDS 17904 18187 . + 0 ID=Thapsdraft706;Parent=Thapsdraft706;rank=2 bd_7x47 . exon 17904 18187 . + . ID=Thapsdraft706.2;Parent=Thapsdraft706;constitutive=1;ensembl_end_phase=2;rank=2 bd_7x47 . CDS 18291 18298 . + 0 ID=Thapsdraft706;Parent=Thapsdraft706;rank=3 bd_7x47 . exon 18291 18298 . + . ID=Thapsdraft706.3;Parent=Thapsdraft706;constitutive=1;ensembl_end_phase=2;rank=3 bd_7x47 . CDS 18371 18472 . + 0 ID=Thapsdraft706;Parent=Thapsdraft706;rank=4 bd_7x47 . exon 18371 18472 . + . ID=Thapsdraft706.4;Parent=Thapsdraft706;constitutive=1;rank=4 bd_7x47 . CDS 18500 19134 . + 0 ID=Thapsdraft706;Parent=Thapsdraft706;rank=5 bd_7x47 . exon 18500 19134 . + . ID=Thapsdraft706.5;Parent=Thapsdraft706;constitutive=1;ensembl_end_phase=2;rank=5 bd_7x47 . CDS 19227 19448 . + 0 ID=Thapsdraft706;Parent=Thapsdraft706;rank=6 bd_7x47 . repeat_region 24395 24427 . ? . description=dust bd_7x47 . repeat_region 24396 24427 . ? . description=trf bd_7x47 ensembl protein_coding_gene 19728 20732 . - . ID=Thapsdraft1786;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE45];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 19728 20732 . - . ID=Thapsdraft1786;Parent=Thapsdraft1786;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 19728 20732 . - 0 ID=Thapsdraft1786;Parent=Thapsdraft1786;rank=1 bd_7x47 . exon 19728 20732 . - . ID=Thapsdraft1786.1;Parent=Thapsdraft1786;constitutive=1;rank=1 bd_7x47 ensembl protein_coding_gene 21422 22480 . + . ID=Thapsdraft1787;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6A3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 21422 22480 . + . ID=Thapsdraft1787;Parent=Thapsdraft1787;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 21422 22480 . + 0 ID=Thapsdraft1787;Parent=Thapsdraft1787;rank=1 bd_7x47 . exon 21422 22480 . + . ID=Thapsdraft1787.1;Parent=Thapsdraft1787;constitutive=1;rank=1 bd_7x47 ensembl protein_coding_gene 23022 28087 . + . ID=Thapsdraft1788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE47];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 23022 28087 . + . ID=Thapsdraft1788;Parent=Thapsdraft1788;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 23022 23114 . + 0 ID=Thapsdraft1788;Parent=Thapsdraft1788;rank=1 bd_7x47 . exon 23022 23114 . + . ID=Thapsdraft1788.1;Parent=Thapsdraft1788;constitutive=1;rank=1 bd_7x47 . CDS 23699 24128 . + 0 ID=Thapsdraft1788;Parent=Thapsdraft1788;rank=2 bd_7x47 . exon 23699 24128 . + . ID=Thapsdraft1788.2;Parent=Thapsdraft1788;constitutive=1;ensembl_end_phase=1;rank=2 bd_7x47 . CDS 24216 25123 . + 0 ID=Thapsdraft1788;Parent=Thapsdraft1788;rank=3 bd_7x47 . exon 24216 25123 . + . ID=Thapsdraft1788.3;Parent=Thapsdraft1788;constitutive=1;ensembl_end_phase=2;rank=3 bd_7x47 . CDS 25220 28087 . + 0 ID=Thapsdraft1788;Parent=Thapsdraft1788;rank=4 bd_7x47 . exon 25220 28087 . + . ID=Thapsdraft1788.4;Parent=Thapsdraft1788;constitutive=1;rank=4 bd_7x47 . exon 19227 19448 . + . ID=Thapsdraft706.6;Parent=Thapsdraft706;constitutive=1;rank=6 bd_7x47 ensembl protein_coding_gene 31609 34652 . - . ID=Thapsdraft1155;biotype=protein_coding;description=Glutamate-cysteine ligase [Source:UniProtKB/TrEMBL%3BAcc:B8LE49];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 31609 34652 . - . ID=Thapsdraft1155;Parent=Thapsdraft1155;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 31609 32018 . - 0 ID=Thapsdraft1155;Parent=Thapsdraft1155;rank=5 bd_7x47 . exon 31609 32018 . - . ID=Thapsdraft1155.5;Parent=Thapsdraft1155;constitutive=1;ensembl_end_phase=2;rank=5 bd_7x47 . CDS 32119 32223 . - 0 ID=Thapsdraft1155;Parent=Thapsdraft1155;rank=4 bd_7x47 . exon 32119 32223 . - . ID=Thapsdraft1155.4;Parent=Thapsdraft1155;constitutive=1;rank=4 bd_7x47 . CDS 32419 32675 . - 0 ID=Thapsdraft1155;Parent=Thapsdraft1155;rank=3 bd_7x47 . exon 32419 32675 . - . ID=Thapsdraft1155.3;Parent=Thapsdraft1155;constitutive=1;ensembl_end_phase=2;rank=3 bd_7x47 . CDS 32761 33368 . - 0 ID=Thapsdraft1155;Parent=Thapsdraft1155;rank=2 bd_7x47 . exon 32761 33368 . - . ID=Thapsdraft1155.2;Parent=Thapsdraft1155;constitutive=1;ensembl_end_phase=2;rank=2 bd_7x47 . CDS 33990 34652 . - 0 ID=Thapsdraft1155;Parent=Thapsdraft1155;rank=1 bd_7x47 . exon 33990 34652 . - . ID=Thapsdraft1155.1;Parent=Thapsdraft1155;constitutive=1;rank=1 bd_7x47 ensembl protein_coding_gene 31004 31552 . + . ID=Thapsdraft1790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE48];external_name=Thaps24712;logic_name=jgi_thaps3 bd_7x47 ensembl transcript 31004 31552 . + . ID=Thapsdraft1790;Parent=Thapsdraft1790;biotype=protein_coding;logic_name=jgi_thaps3 bd_7x47 . CDS 31004 31207 . + 0 ID=Thapsdraft1790;Parent=Thapsdraft1790;rank=1 bd_7x47 . exon 31004 31207 . + . ID=Thapsdraft1790.1;Parent=Thapsdraft1790;constitutive=1;rank=1 bd_7x47 . CDS 31289 31552 . + 0 ID=Thapsdraft1790;Parent=Thapsdraft1790;rank=2 bd_7x47 . exon 31289 31552 . + . ID=Thapsdraft1790.2;Parent=Thapsdraft1790;constitutive=1;rank=2 ##gff-version 3 ##sequence-region bd_33x54 1 43458 bd_33x54 . repeat_region 101 385 . + . description=TE2c_TP bd_33x54 . repeat_region 216 455 . - . description=TE2c_TP bd_33x54 . repeat_region 4090 4104 . ? . description=dust bd_33x54 . repeat_region 5505 5572 . ? . description=trf bd_33x54 ensembl protein_coding_gene 1079 3503 . - . ID=Thapsdraft1077;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEX6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 1079 3503 . - . ID=Thapsdraft1077;Parent=Thapsdraft1077;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 1079 1780 . - 0 ID=Thapsdraft1077;Parent=Thapsdraft1077;rank=2 bd_33x54 . exon 1079 1780 . - . ID=Thapsdraft1077.2;Parent=Thapsdraft1077;constitutive=1;rank=2 bd_33x54 . CDS 1878 3503 . - 0 ID=Thapsdraft1077;Parent=Thapsdraft1077;rank=1 bd_33x54 . exon 1878 3503 . - . ID=Thapsdraft1077.1;Parent=Thapsdraft1077;constitutive=1;rank=1 bd_33x54 ensembl protein_coding_gene 4332 10208 . + . ID=Thapsdraft1078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEX7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 4332 10208 . + . ID=Thapsdraft1078;Parent=Thapsdraft1078;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 4332 10208 . + 0 ID=Thapsdraft1078;Parent=Thapsdraft1078;rank=1 bd_33x54 . exon 4332 10208 . + . ID=Thapsdraft1078.1;Parent=Thapsdraft1078;constitutive=1;rank=1 bd_33x54 . repeat_region 12504 12667 . - . description=MuDR2_TP bd_33x54 ensembl protein_coding_gene 10420 11457 . - . ID=Thapsdraft1079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 10420 11457 . - . ID=Thapsdraft1079;Parent=Thapsdraft1079;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 10420 11457 . - 0 ID=Thapsdraft1079;Parent=Thapsdraft1079;rank=1 bd_33x54 . exon 10420 11457 . - . ID=Thapsdraft1079.1;Parent=Thapsdraft1079;constitutive=1;rank=1 bd_33x54 ensembl protein_coding_gene 13182 14288 . + . ID=Thapsdraft1080;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEY4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 13182 14288 . + . ID=Thapsdraft1080;Parent=Thapsdraft1080;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 13182 14288 . + 0 ID=Thapsdraft1080;Parent=Thapsdraft1080;rank=1 bd_33x54 . exon 13182 14288 . + . ID=Thapsdraft1080.1;Parent=Thapsdraft1080;constitutive=1;rank=1 bd_33x54 ensembl protein_coding_gene 15310 16826 . - . ID=Thapsdraft1081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 15310 16826 . - . ID=Thapsdraft1081;Parent=Thapsdraft1081;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 15310 16095 . - 0 ID=Thapsdraft1081;Parent=Thapsdraft1081;rank=2 bd_33x54 . exon 15310 16095 . - . ID=Thapsdraft1081.2;Parent=Thapsdraft1081;constitutive=1;rank=2 bd_33x54 . CDS 16188 16826 . - 0 ID=Thapsdraft1081;Parent=Thapsdraft1081;rank=1 bd_33x54 . exon 16188 16826 . - . ID=Thapsdraft1081.1;Parent=Thapsdraft1081;constitutive=1;rank=1 bd_33x54 . repeat_region 23691 23710 . ? . description=trf bd_33x54 . repeat_region 23810 23840 . ? . description=trf bd_33x54 . repeat_region 24766 25129 . + . description=Gypsy3LTR_TP bd_33x54 . repeat_region 25125 25175 . + . description=Gypsy3LTR_TP bd_33x54 . repeat_region 25748 25784 . ? . description=trf bd_33x54 ensembl protein_coding_gene 19200 20834 . - . ID=Thapsdraft1949;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEY6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 19200 20834 . - . ID=Thapsdraft1949;Parent=Thapsdraft1949;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 19200 20834 . - 0 ID=Thapsdraft1949;Parent=Thapsdraft1949;rank=1 bd_33x54 . exon 19200 20834 . - . ID=Thapsdraft1949.1;Parent=Thapsdraft1949;constitutive=1;rank=1 bd_33x54 ensembl protein_coding_gene 21586 24320 . + . ID=Thapsdraft1950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEY7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 21586 24320 . + . ID=Thapsdraft1950;Parent=Thapsdraft1950;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 21586 22469 . + 0 ID=Thapsdraft1950;Parent=Thapsdraft1950;rank=1 bd_33x54 . exon 21586 22469 . + . ID=Thapsdraft1950.1;Parent=Thapsdraft1950;constitutive=1;ensembl_end_phase=2;rank=1 bd_33x54 . CDS 22622 23225 . + 0 ID=Thapsdraft1950;Parent=Thapsdraft1950;rank=2 bd_33x54 . exon 22622 23225 . + . ID=Thapsdraft1950.2;Parent=Thapsdraft1950;constitutive=1;ensembl_end_phase=1;rank=2 bd_33x54 . CDS 23308 23410 . + 0 ID=Thapsdraft1950;Parent=Thapsdraft1950;rank=3 bd_33x54 . exon 23308 23410 . + . ID=Thapsdraft1950.3;Parent=Thapsdraft1950;constitutive=1;ensembl_end_phase=1;rank=3 bd_33x54 . CDS 23512 23529 . + 0 ID=Thapsdraft1950;Parent=Thapsdraft1950;rank=4 bd_33x54 . exon 23512 23529 . + . ID=Thapsdraft1950.4;Parent=Thapsdraft1950;constitutive=1;rank=4 bd_33x54 . CDS 23656 23710 . + 0 ID=Thapsdraft1950;Parent=Thapsdraft1950;rank=5 bd_33x54 . exon 23656 23710 . + . ID=Thapsdraft1950.5;Parent=Thapsdraft1950;constitutive=1;ensembl_end_phase=1;rank=5 bd_33x54 . CDS 23801 24320 . + 0 ID=Thapsdraft1950;Parent=Thapsdraft1950;rank=6 bd_33x54 . exon 23801 24320 . + . ID=Thapsdraft1950.6;Parent=Thapsdraft1950;constitutive=1;ensembl_end_phase=1;rank=6 bd_33x54 . repeat_region 26617 26626 . ? . description=dust bd_33x54 ensembl protein_coding_gene 34142 35476 . - . ID=Thapsdraft1091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEX9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 34142 35476 . - . ID=Thapsdraft1091;Parent=Thapsdraft1091;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 34142 35476 . - 0 ID=Thapsdraft1091;Parent=Thapsdraft1091;rank=1 bd_33x54 . exon 34142 35476 . - . ID=Thapsdraft1091.1;Parent=Thapsdraft1091;constitutive=1;rank=1 bd_33x54 ensembl protein_coding_gene 31517 32290 . - . ID=Thapsdraft1464;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 31517 32290 . - . ID=Thapsdraft1464;Parent=Thapsdraft1464;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 31517 32290 . - 0 ID=Thapsdraft1464;Parent=Thapsdraft1464;rank=1 bd_33x54 . exon 31517 32290 . - . ID=Thapsdraft1464.1;Parent=Thapsdraft1464;constitutive=1;rank=1 bd_33x54 ensembl protein_coding_gene 30025 31099 . - . ID=Thapsdraft1465;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEZ0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 30025 31099 . - . ID=Thapsdraft1465;Parent=Thapsdraft1465;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 30025 30831 . - 0 ID=Thapsdraft1465;Parent=Thapsdraft1465;rank=2 bd_33x54 . exon 30025 30831 . - . ID=Thapsdraft1465.2;Parent=Thapsdraft1465;constitutive=1;rank=2 bd_33x54 . CDS 30917 31099 . - 0 ID=Thapsdraft1465;Parent=Thapsdraft1465;rank=1 bd_33x54 . exon 30917 31099 . - . ID=Thapsdraft1465.1;Parent=Thapsdraft1465;constitutive=1;rank=1 bd_33x54 ensembl protein_coding_gene 26206 27404 . + . ID=Thapsdraft1692;biotype=protein_coding;description=SNARE component [Source:UniProtKB/TrEMBL%3BAcc:B8LEY8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 26206 27404 . + . ID=Thapsdraft1692;Parent=Thapsdraft1692;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 26206 26400 . + 0 ID=Thapsdraft1692;Parent=Thapsdraft1692;rank=1 bd_33x54 . exon 26206 26400 . + . ID=Thapsdraft1692.1;Parent=Thapsdraft1692;constitutive=1;rank=1 bd_33x54 . CDS 26745 27404 . + 0 ID=Thapsdraft1692;Parent=Thapsdraft1692;rank=2 bd_33x54 . exon 26745 27404 . + . ID=Thapsdraft1692.2;Parent=Thapsdraft1692;constitutive=1;rank=2 bd_33x54 ensembl protein_coding_gene 28756 29649 . + . ID=Thapsdraft1954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEY9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 28756 29649 . + . ID=Thapsdraft1954;Parent=Thapsdraft1954;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 28756 29649 . + 0 ID=Thapsdraft1954;Parent=Thapsdraft1954;rank=1 bd_33x54 . exon 28756 29649 . + . ID=Thapsdraft1954.1;Parent=Thapsdraft1954;constitutive=1;rank=1 bd_33x54 . repeat_region 37231 37283 . ? . description=trf bd_33x54 ensembl protein_coding_gene 35932 40469 . + . ID=Thapsdraft1092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEY1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 35932 40469 . + . ID=Thapsdraft1092;Parent=Thapsdraft1092;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 35932 37827 . + 0 ID=Thapsdraft1092;Parent=Thapsdraft1092;rank=1 bd_33x54 . exon 35932 37827 . + . ID=Thapsdraft1092.1;Parent=Thapsdraft1092;constitutive=1;rank=1 bd_33x54 . CDS 37912 40384 . + 0 ID=Thapsdraft1092;Parent=Thapsdraft1092;rank=2 bd_33x54 . exon 37912 40384 . + . ID=Thapsdraft1092.2;Parent=Thapsdraft1092;constitutive=1;ensembl_end_phase=1;rank=2 bd_33x54 . CDS 40429 40469 . + 0 ID=Thapsdraft1092;Parent=Thapsdraft1092;rank=3 bd_33x54 . exon 40429 40469 . + . ID=Thapsdraft1092.3;Parent=Thapsdraft1092;constitutive=1;ensembl_end_phase=2;rank=3 bd_33x54 ensembl protein_coding_gene 40645 41185 . + . ID=Thapsdraft1094;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 40645 41185 . + . ID=Thapsdraft1094;Parent=Thapsdraft1094;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 40645 41185 . + 0 ID=Thapsdraft1094;Parent=Thapsdraft1094;rank=1 bd_33x54 . exon 40645 41185 . + . ID=Thapsdraft1094.1;Parent=Thapsdraft1094;constitutive=1;ensembl_end_phase=1;rank=1 bd_33x54 ensembl protein_coding_gene 41351 42565 . + . ID=Thapsdraft1095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEY3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_33x54 ensembl transcript 41351 42565 . + . ID=Thapsdraft1095;Parent=Thapsdraft1095;biotype=protein_coding;logic_name=jgi_thaps3 bd_33x54 . CDS 41351 41752 . + 0 ID=Thapsdraft1095;Parent=Thapsdraft1095;rank=1 bd_33x54 . exon 41351 41752 . + . ID=Thapsdraft1095.1;Parent=Thapsdraft1095;constitutive=1;rank=1 bd_33x54 . CDS 41838 42402 . + 0 ID=Thapsdraft1095;Parent=Thapsdraft1095;rank=2 bd_33x54 . exon 41838 42402 . + . ID=Thapsdraft1095.2;Parent=Thapsdraft1095;constitutive=1;ensembl_end_phase=1;rank=2 bd_33x54 . CDS 42474 42565 . + 0 ID=Thapsdraft1095;Parent=Thapsdraft1095;rank=3 bd_33x54 . exon 42474 42565 . + . ID=Thapsdraft1095.3;Parent=Thapsdraft1095;constitutive=1;ensembl_end_phase=2;rank=3 ##gff-version 3 ##sequence-region bd_8x51 1 51378 bd_8x51 . repeat_region 994 1067 . ? . description=trf bd_8x51 . repeat_region 1065 1247 . ? . description=trf bd_8x51 . repeat_region 1065 1272 . ? . description=dust bd_8x51 . repeat_region 1347 1386 . ? . description=trf bd_8x51 . repeat_region 1572 1827 . ? . description=dust bd_8x51 . repeat_region 1582 1824 . ? . description=trf bd_8x51 . repeat_region 2004 2216 . ? . description=trf bd_8x51 . repeat_region 3432 3450 . ? . description=dust bd_8x51 ensembl protein_coding_gene 7888 8379 . - . ID=Thapsdraft1161;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE54];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 7888 8379 . - . ID=Thapsdraft1161;Parent=Thapsdraft1161;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 7888 8379 . - 0 ID=Thapsdraft1161;Parent=Thapsdraft1161;rank=1 bd_8x51 . exon 7888 8379 . - . ID=Thapsdraft1161.1;Parent=Thapsdraft1161;constitutive=1;rank=1 bd_8x51 ensembl protein_coding_gene 2459 2833 . + . ID=Thapsdraft1792;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE50];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 2459 2833 . + . ID=Thapsdraft1792;Parent=Thapsdraft1792;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 2459 2833 . + 0 ID=Thapsdraft1792;Parent=Thapsdraft1792;rank=1 bd_8x51 . exon 2459 2833 . + . ID=Thapsdraft1792.1;Parent=Thapsdraft1792;constitutive=1;rank=1 bd_8x51 ensembl protein_coding_gene 3180 4176 . - . ID=Thapsdraft1793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE51];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 3180 4176 . - . ID=Thapsdraft1793;Parent=Thapsdraft1793;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 3180 3382 . - 0 ID=Thapsdraft1793;Parent=Thapsdraft1793;rank=4 bd_8x51 . exon 3180 3382 . - . ID=Thapsdraft1793.4;Parent=Thapsdraft1793;constitutive=1;ensembl_end_phase=2;rank=4 bd_8x51 . CDS 3426 3789 . - 0 ID=Thapsdraft1793;Parent=Thapsdraft1793;rank=3 bd_8x51 . exon 3426 3789 . - . ID=Thapsdraft1793.3;Parent=Thapsdraft1793;constitutive=1;ensembl_end_phase=1;rank=3 bd_8x51 . CDS 3824 3992 . - 0 ID=Thapsdraft1793;Parent=Thapsdraft1793;rank=2 bd_8x51 . exon 3824 3992 . - . ID=Thapsdraft1793.2;Parent=Thapsdraft1793;constitutive=1;ensembl_end_phase=1;rank=2 bd_8x51 . CDS 4031 4176 . - 0 ID=Thapsdraft1793;Parent=Thapsdraft1793;rank=1 bd_8x51 . exon 4031 4176 . - . ID=Thapsdraft1793.1;Parent=Thapsdraft1793;constitutive=1;ensembl_end_phase=2;rank=1 bd_8x51 ensembl protein_coding_gene 4699 5375 . + . ID=Thapsdraft409;biotype=protein_coding;description=Copia-like retroelement pol polyprotein found-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE52];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 4699 5375 . + . ID=Thapsdraft409;Parent=Thapsdraft409;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 4699 4777 . + 0 ID=Thapsdraft409;Parent=Thapsdraft409;rank=1 bd_8x51 . exon 4699 4777 . + . ID=Thapsdraft409.1;Parent=Thapsdraft409;constitutive=1;ensembl_end_phase=1;rank=1 bd_8x51 . CDS 4891 5375 . + 0 ID=Thapsdraft409;Parent=Thapsdraft409;rank=2 bd_8x51 . exon 4891 5375 . + . ID=Thapsdraft409.2;Parent=Thapsdraft409;constitutive=1;ensembl_end_phase=2;rank=2 bd_8x51 ensembl protein_coding_gene 5821 7104 . - . ID=Thapsdraft716;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE53];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 5821 7104 . - . ID=Thapsdraft716;Parent=Thapsdraft716;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 5821 7104 . - 0 ID=Thapsdraft716;Parent=Thapsdraft716;rank=1 bd_8x51 . exon 5821 7104 . - . ID=Thapsdraft716.1;Parent=Thapsdraft716;constitutive=1;rank=1 bd_8x51 ensembl protein_coding_gene 14584 15429 . - . ID=Thapsdraft410;biotype=protein_coding;description=Endonuclease [Source:UniProtKB/TrEMBL%3BAcc:B8LE57];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 14584 15429 . - . ID=Thapsdraft410;Parent=Thapsdraft410;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 14584 14767 . - 0 ID=Thapsdraft410;Parent=Thapsdraft410;rank=4 bd_8x51 . exon 14584 14767 . - . ID=Thapsdraft410.4;Parent=Thapsdraft410;constitutive=1;ensembl_end_phase=1;rank=4 bd_8x51 . CDS 14880 15013 . - 0 ID=Thapsdraft410;Parent=Thapsdraft410;rank=3 bd_8x51 . exon 14880 15013 . - . ID=Thapsdraft410.3;Parent=Thapsdraft410;constitutive=1;ensembl_end_phase=2;rank=3 bd_8x51 . CDS 15123 15299 . - 0 ID=Thapsdraft410;Parent=Thapsdraft410;rank=2 bd_8x51 . exon 15123 15299 . - . ID=Thapsdraft410.2;Parent=Thapsdraft410;constitutive=1;rank=2 bd_8x51 . CDS 15400 15429 . - 0 ID=Thapsdraft410;Parent=Thapsdraft410;rank=1 bd_8x51 . exon 15400 15429 . - . ID=Thapsdraft410.1;Parent=Thapsdraft410;constitutive=1;rank=1 bd_8x51 ensembl protein_coding_gene 9709 11162 . + . ID=Thapsdraft718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE55];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 9709 11162 . + . ID=Thapsdraft718;Parent=Thapsdraft718;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 9709 9893 . + 0 ID=Thapsdraft718;Parent=Thapsdraft718;rank=1 bd_8x51 . exon 9709 9893 . + . ID=Thapsdraft718.1;Parent=Thapsdraft718;constitutive=1;ensembl_end_phase=2;rank=1 bd_8x51 . CDS 10274 10445 . + 0 ID=Thapsdraft718;Parent=Thapsdraft718;rank=2 bd_8x51 . exon 10274 10445 . + . ID=Thapsdraft718.2;Parent=Thapsdraft718;constitutive=1;ensembl_end_phase=1;rank=2 bd_8x51 . CDS 10575 11162 . + 0 ID=Thapsdraft718;Parent=Thapsdraft718;rank=3 bd_8x51 . exon 10575 11162 . + . ID=Thapsdraft718.3;Parent=Thapsdraft718;constitutive=1;rank=3 bd_8x51 ensembl protein_coding_gene 11873 14074 . + . ID=Thapsdraft719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE56];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 11873 14074 . + . ID=Thapsdraft719;Parent=Thapsdraft719;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 11873 14074 . + 0 ID=Thapsdraft719;Parent=Thapsdraft719;rank=1 bd_8x51 . exon 11873 14074 . + . ID=Thapsdraft719.1;Parent=Thapsdraft719;constitutive=1;rank=1 bd_8x51 . repeat_region 25238 25408 . ? . description=trf bd_8x51 ensembl protein_coding_gene 18810 23488 . + . ID=Thapsdraft721;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE58];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 18810 23488 . + . ID=Thapsdraft721;Parent=Thapsdraft721;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 18810 19210 . + 0 ID=Thapsdraft721;Parent=Thapsdraft721;rank=1 bd_8x51 . exon 18810 19210 . + . ID=Thapsdraft721.1;Parent=Thapsdraft721;constitutive=1;ensembl_end_phase=2;rank=1 bd_8x51 . CDS 19349 21078 . + 0 ID=Thapsdraft721;Parent=Thapsdraft721;rank=2 bd_8x51 . exon 19349 21078 . + . ID=Thapsdraft721.2;Parent=Thapsdraft721;constitutive=1;ensembl_end_phase=2;rank=2 bd_8x51 . CDS 21169 21347 . + 0 ID=Thapsdraft721;Parent=Thapsdraft721;rank=3 bd_8x51 . exon 21169 21347 . + . ID=Thapsdraft721.3;Parent=Thapsdraft721;constitutive=1;ensembl_end_phase=2;rank=3 bd_8x51 . CDS 21435 21581 . + 0 ID=Thapsdraft721;Parent=Thapsdraft721;rank=4 bd_8x51 . exon 21435 21581 . + . ID=Thapsdraft721.4;Parent=Thapsdraft721;constitutive=1;rank=4 bd_8x51 . CDS 21670 22881 . + 0 ID=Thapsdraft721;Parent=Thapsdraft721;rank=5 bd_8x51 . exon 21670 22881 . + . ID=Thapsdraft721.5;Parent=Thapsdraft721;constitutive=1;rank=5 bd_8x51 . CDS 22949 23488 . + 0 ID=Thapsdraft721;Parent=Thapsdraft721;rank=6 bd_8x51 . exon 22949 23488 . + . ID=Thapsdraft721.6;Parent=Thapsdraft721;constitutive=1;rank=6 bd_8x51 ensembl protein_coding_gene 23577 29419 . - . ID=Thapsdraft722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE59];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 23577 29419 . - . ID=Thapsdraft722;Parent=Thapsdraft722;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 23577 26150 . - 0 ID=Thapsdraft722;Parent=Thapsdraft722;rank=3 bd_8x51 . exon 23577 26150 . - . ID=Thapsdraft722.3;Parent=Thapsdraft722;constitutive=1;rank=3 bd_8x51 . CDS 26236 26646 . - 0 ID=Thapsdraft722;Parent=Thapsdraft722;rank=2 bd_8x51 . CDS 26885 29419 . - 0 ID=Thapsdraft722;Parent=Thapsdraft722;rank=1 bd_8x51 . repeat_region 30977 30998 . ? . description=dust bd_8x51 . repeat_region 32551 32565 . ? . description=dust bd_8x51 . repeat_region 34197 34210 . ? . description=dust bd_8x51 ensembl protein_coding_gene 32053 32448 . - . ID=Thapsdraft1160;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE60];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 32053 32448 . - . ID=Thapsdraft1160;Parent=Thapsdraft1160;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 32053 32448 . - 0 ID=Thapsdraft1160;Parent=Thapsdraft1160;rank=1 bd_8x51 . exon 32053 32448 . - . ID=Thapsdraft1160.1;Parent=Thapsdraft1160;constitutive=1;rank=1 bd_8x51 ensembl protein_coding_gene 33276 33848 . + . ID=Thapsdraft218;biotype=protein_coding;description=Photosystem I light harvesting protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE61];external_name=LHCA;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 33276 33848 . + . ID=Thapsdraft218;Parent=Thapsdraft218;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 33276 33656 . + 0 ID=Thapsdraft218;Parent=Thapsdraft218;rank=1 bd_8x51 . exon 33276 33656 . + . ID=Thapsdraft218.1;Parent=Thapsdraft218;constitutive=1;rank=1 bd_8x51 . CDS 33795 33848 . + 0 ID=Thapsdraft218;Parent=Thapsdraft218;rank=2 bd_8x51 . exon 33795 33848 . + . ID=Thapsdraft218.2;Parent=Thapsdraft218;constitutive=1;rank=2 bd_8x51 . exon 26236 26646 . - . ID=Thapsdraft722.2;Parent=Thapsdraft722;constitutive=1;rank=2 bd_8x51 . exon 26885 29419 . - . ID=Thapsdraft722.1;Parent=Thapsdraft722;constitutive=1;rank=1 bd_8x51 . repeat_region 41770 41794 . ? . description=trf bd_8x51 ensembl protein_coding_gene 35750 38626 . + . ID=Thapsdraft1798;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE63];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 35750 38626 . + . ID=Thapsdraft1798;Parent=Thapsdraft1798;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 35750 36995 . + 0 ID=Thapsdraft1798;Parent=Thapsdraft1798;rank=1 bd_8x51 . exon 35750 36995 . + . ID=Thapsdraft1798.1;Parent=Thapsdraft1798;constitutive=1;ensembl_end_phase=1;rank=1 bd_8x51 . CDS 37094 37475 . + 0 ID=Thapsdraft1798;Parent=Thapsdraft1798;rank=2 bd_8x51 . exon 37094 37475 . + . ID=Thapsdraft1798.2;Parent=Thapsdraft1798;constitutive=1;ensembl_end_phase=1;rank=2 bd_8x51 . CDS 37545 37957 . + 0 ID=Thapsdraft1798;Parent=Thapsdraft1798;rank=3 bd_8x51 . exon 37545 37957 . + . ID=Thapsdraft1798.3;Parent=Thapsdraft1798;constitutive=1;ensembl_end_phase=2;rank=3 bd_8x51 . CDS 38040 38626 . + 0 ID=Thapsdraft1798;Parent=Thapsdraft1798;rank=4 bd_8x51 . exon 38040 38626 . + . ID=Thapsdraft1798.4;Parent=Thapsdraft1798;constitutive=1;ensembl_end_phase=2;rank=4 bd_8x51 ensembl protein_coding_gene 34494 35069 . + . ID=Thapsdraft727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE62];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 34494 35069 . + . ID=Thapsdraft727;Parent=Thapsdraft727;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 34494 35069 . + 0 ID=Thapsdraft727;Parent=Thapsdraft727;rank=1 bd_8x51 . exon 34494 35069 . + . ID=Thapsdraft727.1;Parent=Thapsdraft727;constitutive=1;rank=1 bd_8x51 ensembl protein_coding_gene 38979 39470 . + . ID=Thapsdraft729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE64];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 38979 39470 . + . ID=Thapsdraft729;Parent=Thapsdraft729;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 38979 39470 . + 0 ID=Thapsdraft729;Parent=Thapsdraft729;rank=1 bd_8x51 . exon 38979 39470 . + . ID=Thapsdraft729.1;Parent=Thapsdraft729;constitutive=1;rank=1 bd_8x51 ensembl protein_coding_gene 41531 43105 . + . ID=Thapsdraft730;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE65];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 41531 43105 . + . ID=Thapsdraft730;Parent=Thapsdraft730;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 41531 43105 . + 0 ID=Thapsdraft730;Parent=Thapsdraft730;rank=1 bd_8x51 . exon 41531 43105 . + . ID=Thapsdraft730.1;Parent=Thapsdraft730;constitutive=1;rank=1 bd_8x51 . repeat_region 47168 47178 . ? . description=dust bd_8x51 . repeat_region 49975 51376 . - . description=Harbinger3_TP bd_8x51 . repeat_region 50012 50042 . ? . description=dust bd_8x51 ensembl protein_coding_gene 48217 49894 . + . ID=Thapsdraft1799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE67];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 48217 49894 . + . ID=Thapsdraft1799;Parent=Thapsdraft1799;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 48217 48273 . + 0 ID=Thapsdraft1799;Parent=Thapsdraft1799;rank=1 bd_8x51 . exon 48217 48273 . + . ID=Thapsdraft1799.1;Parent=Thapsdraft1799;constitutive=1;rank=1 bd_8x51 . CDS 48369 48686 . + 0 ID=Thapsdraft1799;Parent=Thapsdraft1799;rank=2 bd_8x51 . exon 48369 48686 . + . ID=Thapsdraft1799.2;Parent=Thapsdraft1799;constitutive=1;rank=2 bd_8x51 . CDS 48780 48844 . + 0 ID=Thapsdraft1799;Parent=Thapsdraft1799;rank=3 bd_8x51 . exon 48780 48844 . + . ID=Thapsdraft1799.3;Parent=Thapsdraft1799;constitutive=1;ensembl_end_phase=2;rank=3 bd_8x51 . CDS 48939 49009 . + 0 ID=Thapsdraft1799;Parent=Thapsdraft1799;rank=4 bd_8x51 . exon 48939 49009 . + . ID=Thapsdraft1799.4;Parent=Thapsdraft1799;constitutive=1;ensembl_end_phase=2;rank=4 bd_8x51 . CDS 49107 49894 . + 0 ID=Thapsdraft1799;Parent=Thapsdraft1799;rank=5 bd_8x51 . exon 49107 49894 . + . ID=Thapsdraft1799.5;Parent=Thapsdraft1799;constitutive=1;ensembl_end_phase=2;rank=5 bd_8x51 ensembl protein_coding_gene 43859 45756 . - . ID=Thapsdraft731;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE66];external_name=Thaps24712;logic_name=jgi_thaps3 bd_8x51 ensembl transcript 43859 45756 . - . ID=Thapsdraft731;Parent=Thapsdraft731;biotype=protein_coding;logic_name=jgi_thaps3 bd_8x51 . CDS 43859 43939 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=13 bd_8x51 . exon 43859 43939 . - . ID=Thapsdraft731.13;Parent=Thapsdraft731;constitutive=1;rank=13 bd_8x51 . CDS 44030 44073 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=12 bd_8x51 . exon 44030 44073 . - . ID=Thapsdraft731.12;Parent=Thapsdraft731;constitutive=1;ensembl_end_phase=2;rank=12 bd_8x51 . CDS 44141 44332 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=11 bd_8x51 . exon 44141 44332 . - . ID=Thapsdraft731.11;Parent=Thapsdraft731;constitutive=1;rank=11 bd_8x51 . CDS 44413 44452 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=10 bd_8x51 . exon 44413 44452 . - . ID=Thapsdraft731.10;Parent=Thapsdraft731;constitutive=1;ensembl_end_phase=1;rank=10 bd_8x51 . CDS 44538 44628 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=9 bd_8x51 . exon 44538 44628 . - . ID=Thapsdraft731.9;Parent=Thapsdraft731;constitutive=1;ensembl_end_phase=1;rank=9 bd_8x51 . CDS 44711 44739 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=8 bd_8x51 . exon 44711 44739 . - . ID=Thapsdraft731.8;Parent=Thapsdraft731;constitutive=1;ensembl_end_phase=2;rank=8 bd_8x51 . CDS 44950 44985 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=7 bd_8x51 . exon 44950 44985 . - . ID=Thapsdraft731.7;Parent=Thapsdraft731;constitutive=1;rank=7 bd_8x51 . CDS 45081 45140 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=6 bd_8x51 . exon 45081 45140 . - . ID=Thapsdraft731.6;Parent=Thapsdraft731;constitutive=1;rank=6 bd_8x51 . CDS 45242 45277 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=5 bd_8x51 . exon 45242 45277 . - . ID=Thapsdraft731.5;Parent=Thapsdraft731;constitutive=1;rank=5 bd_8x51 . CDS 45353 45377 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=4 bd_8x51 . exon 45353 45377 . - . ID=Thapsdraft731.4;Parent=Thapsdraft731;constitutive=1;ensembl_end_phase=1;rank=4 bd_8x51 . CDS 45479 45502 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=3 bd_8x51 . exon 45479 45502 . - . ID=Thapsdraft731.3;Parent=Thapsdraft731;constitutive=1;rank=3 bd_8x51 . CDS 45619 45642 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=2 bd_8x51 . exon 45619 45642 . - . ID=Thapsdraft731.2;Parent=Thapsdraft731;constitutive=1;rank=2 bd_8x51 . CDS 45716 45756 . - 0 ID=Thapsdraft731;Parent=Thapsdraft731;rank=1 bd_8x51 . exon 45716 45756 . - . ID=Thapsdraft731.1;Parent=Thapsdraft731;constitutive=1;ensembl_end_phase=2;rank=1 ##gff-version 3 ##sequence-region bd_26x41 1 63870 bd_26x41 . repeat_region 515 568 . ? . description=dust bd_26x41 . repeat_region 846 880 . ? . description=dust bd_26x41 . repeat_region 898 958 . ? . description=dust bd_26x41 . repeat_region 962 1021 . ? . description=dust bd_26x41 . repeat_region 1376 1388 . ? . description=dust bd_26x41 . repeat_region 2019 2039 . ? . description=trf bd_26x41 . repeat_region 2338 2380 . ? . description=dust bd_26x41 . repeat_region 3233 3286 . ? . description=dust bd_26x41 . repeat_region 3242 3265 . ? . description=trf bd_26x41 . repeat_region 7105 7159 . ? . description=dust bd_26x41 . repeat_region 9031 9040 . ? . description=dust bd_26x41 ensembl tRNA_gene 8436 8523 . - . ID=EPrTPOG00000000066;biotype=tRNA;description=tRNA-Ser for anticodon GCU [Source:TRNASCAN_SE%3BAcc:tRNA-Ser];external_name=tRNA-Ser;logic_name=ncrna_eg bd_26x41 ensembl transcript 8436 8523 . - . ID=EPrTPOT00000000066;Parent=EPrTPOG00000000066;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 9062 9135 . - . ID=EPrTPOG00000000078;biotype=tRNA;description=tRNA-Met for anticodon CAU [Source:TRNASCAN_SE%3BAcc:tRNA-Met];external_name=tRNA-Met;logic_name=ncrna_eg bd_26x41 ensembl transcript 9062 9135 . - . ID=EPrTPOT00000000078;Parent=EPrTPOG00000000078;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 4641 4711 . + . ID=EPrTPOG00000000083;biotype=tRNA;description=tRNA-Gly for anticodon GCC [Source:TRNASCAN_SE%3BAcc:tRNA-Gly];external_name=tRNA-Gly;logic_name=ncrna_eg bd_26x41 ensembl transcript 4641 4711 . + . ID=EPrTPOT00000000083;Parent=EPrTPOG00000000083;biotype=tRNA;logic_name=ncrna_eg bd_26x41 . exon 8436 8523 . - . ID=EPrTPOE00000000066;Parent=EPrTPOT00000000066;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . exon 9062 9135 . - . ID=EPrTPOE00000000078;Parent=EPrTPOT00000000078;constitutive=1;ensembl_end_phase=2;rank=1 bd_26x41 . exon 4641 4711 . + . ID=EPrTPOE00000000083;Parent=EPrTPOT00000000083;constitutive=1;ensembl_end_phase=2;rank=1 bd_26x41 ensembl protein_coding_gene 4049 4594 . + . ID=Thapsdraft1304;biotype=protein_coding;description=Photosystem I assembly protein ycf4 [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0U3];external_name=YCF4;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 4049 4594 . + . ID=Thapsdraft1304;Parent=Thapsdraft1304;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 4049 4594 . + 0 ID=Thapsdraft1304;Parent=Thapsdraft1304;rank=1 bd_26x41 . exon 4049 4594 . + . ID=Thapsdraft1304.1;Parent=Thapsdraft1304;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 2371 3234 . - . ID=Thapsdraft1306;biotype=protein_coding;description=Rubisco expression proteinRubisco expression protein%2C plastid protein [Source:UniProtKB/TrEMBL%3BAcc:A0T0U6];external_name=CBBX;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 2371 3234 . - . ID=Thapsdraft1306;Parent=Thapsdraft1306;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 2371 3234 . - 0 ID=Thapsdraft1306;Parent=Thapsdraft1306;rank=1 bd_26x41 . exon 2371 3234 . - . ID=Thapsdraft1306.1;Parent=Thapsdraft1306;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 8559 8978 . - . ID=Thapsdraft1339;biotype=protein_coding;description=Photosystem I ferredoxin-binding proteinPredicted protein [Source:UniProtKB/TrEMBL%3BAcc:A0T0T5];external_name=PSAD;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 8559 8978 . - . ID=Thapsdraft1339;Parent=Thapsdraft1339;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 8559 8978 . - 0 ID=Thapsdraft1339;Parent=Thapsdraft1339;rank=1 bd_26x41 . exon 8559 8978 . - . ID=Thapsdraft1339.1;Parent=Thapsdraft1339;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 3322 3768 . - . ID=Thapsdraft1342;biotype=protein_coding;description=Photosystem I reaction center subunit XI [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0U5];external_name=PSAL;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 3322 3768 . - . ID=Thapsdraft1342;Parent=Thapsdraft1342;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 3322 3768 . - 0 ID=Thapsdraft1342;Parent=Thapsdraft1342;rank=1 bd_26x41 . exon 3322 3768 . - . ID=Thapsdraft1342.1;Parent=Thapsdraft1342;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 1 507 . - . ID=Thapsdraft1350;biotype=protein_coding;description=PSAF%2C photosystem I reaction center subunit [Source:UniProtKB/TrEMBL%3BAcc:B8LEU6];external_name=PSAF;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 1 507 . - . ID=Thapsdraft1350;Parent=Thapsdraft1350;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 1 507 . - 0 ID=Thapsdraft1350;Parent=Thapsdraft1350;rank=1 bd_26x41 . exon 1 507 . - . ID=Thapsdraft1350.1;Parent=Thapsdraft1350;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 1363 2322 . - . ID=Thapsdraft1380;biotype=protein_coding;description=Predicted proteinPutative uncharacterized protein ycf39 [Source:UniProtKB/TrEMBL%3BAcc:A0T0U7];external_name=YCF39;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 1363 2322 . - . ID=Thapsdraft1380;Parent=Thapsdraft1380;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 1363 2322 . - 0 ID=Thapsdraft1380;Parent=Thapsdraft1380;rank=1 bd_26x41 . exon 1363 2322 . - . ID=Thapsdraft1380.1;Parent=Thapsdraft1380;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 4767 5021 . + . ID=Thapsdraft1387;biotype=protein_coding;description=Cytochrome b559 subunit alpha [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0U2];external_name=PSBE;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 4767 5021 . + . ID=Thapsdraft1387;Parent=Thapsdraft1387;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 4767 5021 . + 0 ID=Thapsdraft1387;Parent=Thapsdraft1387;rank=1 bd_26x41 . exon 4767 5021 . + . ID=Thapsdraft1387.1;Parent=Thapsdraft1387;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 1031 1345 . - . ID=Thapsdraft1403;biotype=protein_coding;description=Predicted proteinPutative uncharacterized protein ycf41 [Source:UniProtKB/TrEMBL%3BAcc:A0T0U8];external_name=YCF41;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 1031 1345 . - . ID=Thapsdraft1403;Parent=Thapsdraft1403;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 1031 1345 . - 0 ID=Thapsdraft1403;Parent=Thapsdraft1403;rank=1 bd_26x41 . exon 1031 1345 . - . ID=Thapsdraft1403.1;Parent=Thapsdraft1403;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 7179 7661 . - . ID=Thapsdraft466;biotype=protein_coding;description=Cytochrome b6-f complex subunit 4 [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0T7];external_name=PETF_2;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 7179 7661 . - . ID=Thapsdraft466;Parent=Thapsdraft466;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 7179 7661 . - 0 ID=Thapsdraft466;Parent=Thapsdraft466;rank=1 bd_26x41 . exon 7179 7661 . - . ID=Thapsdraft466.1;Parent=Thapsdraft466;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 7708 8355 . - . ID=Thapsdraft467;biotype=protein_coding;description=Cytochrome b6 [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0T6];external_name=PETB;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 7708 8355 . - . ID=Thapsdraft467;Parent=Thapsdraft467;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 7708 8355 . - 0 ID=Thapsdraft467;Parent=Thapsdraft467;rank=1 bd_26x41 . exon 7708 8355 . - . ID=Thapsdraft467.1;Parent=Thapsdraft467;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 5952 6947 . - . ID=Thapsdraft93;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LES6];external_name=YCF90;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 5952 6947 . - . ID=Thapsdraft93;Parent=Thapsdraft93;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 5952 6947 . - 0 ID=Thapsdraft93;Parent=Thapsdraft93;rank=1 bd_26x41 . exon 5952 6947 . - . ID=Thapsdraft93.1;Parent=Thapsdraft93;constitutive=1;rank=1 bd_26x41 ensembl tRNA_gene 14333 14414 . - . ID=EPrTPOG00000000006;biotype=tRNA;description=tRNA-Tyr for anticodon GUA [Source:TRNASCAN_SE%3BAcc:tRNA-Tyr];external_name=tRNA-Tyr;logic_name=ncrna_eg bd_26x41 ensembl transcript 14333 14414 . - . ID=EPrTPOT00000000020;Parent=EPrTPOG00000000006;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 15016 15089 . - . ID=EPrTPOG00000000015;biotype=tRNA;description=tRNA-Asp for anticodon GUC [Source:TRNASCAN_SE%3BAcc:tRNA-Asp];external_name=tRNA-Asp;logic_name=ncrna_eg bd_26x41 ensembl transcript 15016 15089 . - . ID=EPrTPOT00000000001;Parent=EPrTPOG00000000015;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 10483 10554 . + . ID=EPrTPOG00000000022;biotype=tRNA;description=tRNA-Lys for anticodon UUU [Source:TRNASCAN_SE%3BAcc:tRNA-Lys];external_name=tRNA-Lys;logic_name=ncrna_eg bd_26x41 ensembl transcript 10483 10554 . + . ID=EPrTPOT00000000015;Parent=EPrTPOG00000000022;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 9678 9749 . - . ID=EPrTPOG00000000040;biotype=tRNA;description=tRNA-Gly for anticodon GCC [Source:TRNASCAN_SE%3BAcc:tRNA-Gly];external_name=tRNA-Gly;logic_name=ncrna_eg bd_26x41 ensembl transcript 9678 9749 . - . ID=EPrTPOT00000000040;Parent=EPrTPOG00000000040;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 15163 15249 . - . ID=EPrTPOG00000000043;biotype=tRNA;description=tRNA-Ser for anticodon GCU [Source:TRNASCAN_SE%3BAcc:tRNA-Ser];external_name=tRNA-Ser;logic_name=ncrna_eg bd_26x41 ensembl transcript 15163 15249 . - . ID=EPrTPOT00000000043;Parent=EPrTPOG00000000043;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 15276 15348 . - . ID=EPrTPOG00000000044;biotype=tRNA;description=tRNA-Met for anticodon CAU [Source:TRNASCAN_SE%3BAcc:tRNA-Met];external_name=tRNA-Met;logic_name=ncrna_eg bd_26x41 ensembl transcript 15276 15348 . - . ID=EPrTPOT00000000044;Parent=EPrTPOG00000000044;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 9578 9650 . - . ID=EPrTPOG00000000052;biotype=tRNA;description=tRNA-Glu for anticodon UUC [Source:TRNASCAN_SE%3BAcc:tRNA-Glu];external_name=tRNA-Glu;logic_name=ncrna_eg bd_26x41 ensembl transcript 9578 9650 . - . ID=EPrTPOT00000000052;Parent=EPrTPOG00000000052;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 15803 15874 . - . ID=EPrTPOG00000000062;biotype=tRNA;description=tRNA-Thr for anticodon UGU [Source:TRNASCAN_SE%3BAcc:tRNA-Thr];external_name=tRNA-Thr;logic_name=ncrna_eg bd_26x41 ensembl transcript 15803 15874 . - . ID=EPrTPOT00000000062;Parent=EPrTPOG00000000062;biotype=tRNA;logic_name=ncrna_eg bd_26x41 . exon 15016 15089 . - . ID=EPrTPOE00000000015;Parent=EPrTPOT00000000001;constitutive=1;ensembl_end_phase=2;rank=1 bd_26x41 . exon 10483 10554 . + . ID=EPrTPOE00000000022;Parent=EPrTPOT00000000015;constitutive=1;rank=1 bd_26x41 . exon 14333 14414 . - . ID=EPrTPOE00000000006;Parent=EPrTPOT00000000020;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . exon 9678 9749 . - . ID=EPrTPOE00000000040;Parent=EPrTPOT00000000040;constitutive=1;rank=1 bd_26x41 . exon 15163 15249 . - . ID=EPrTPOE00000000043;Parent=EPrTPOT00000000043;constitutive=1;rank=1 bd_26x41 . exon 15276 15348 . - . ID=EPrTPOE00000000044;Parent=EPrTPOT00000000044;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . exon 9578 9650 . - . ID=EPrTPOE00000000052;Parent=EPrTPOT00000000052;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . exon 15803 15874 . - . ID=EPrTPOE00000000062;Parent=EPrTPOT00000000062;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 9890 10075 . - . ID=Thapsdraft1426;biotype=protein_coding;description=Photosystem II reaction center protein Z [Source:UniProtKB/TrEMBL%3BAcc:A0T0T3];external_name=PSBZ;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 9890 10075 . - . ID=Thapsdraft1426;Parent=Thapsdraft1426;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 9890 10075 . - 0 ID=Thapsdraft1426;Parent=Thapsdraft1426;rank=1 bd_26x41 . exon 9890 10075 . - . ID=Thapsdraft1426.1;Parent=Thapsdraft1426;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 10659 12074 . - . ID=Thapsdraft1545;biotype=protein_coding;description=Photosystem II CP43 chlorophyll apoprotein [Source:UniProtKB/TrEMBL%3BAcc:A0T0T1];external_name=PSBC;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 10659 12074 . - . ID=Thapsdraft1545;Parent=Thapsdraft1545;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 10659 12074 . - 0 ID=Thapsdraft1545;Parent=Thapsdraft1545;rank=1 bd_26x41 . exon 10659 12074 . - . ID=Thapsdraft1545.1;Parent=Thapsdraft1545;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 16140 18068 . + . ID=Thapsdraft1720;biotype=protein_coding;description=ATP-dependent zinc metalloprotease FtsH 1 [Source:UniProtKB/TrEMBL%3BAcc:A0T0S3];external_name=FTSH;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 16140 18068 . + . ID=Thapsdraft1720;Parent=Thapsdraft1720;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 16140 18068 . + 0 ID=Thapsdraft1720;Parent=Thapsdraft1720;rank=1 bd_26x41 . exon 16140 18068 . + . ID=Thapsdraft1720.1;Parent=Thapsdraft1720;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 9253 9462 . - . ID=Thapsdraft2028;biotype=protein_coding;description=Predicted proteinPreprotein translocase SecG subunit [Source:UniProtKB/TrEMBL%3BAcc:A0T0T4];external_name=SECG;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 9253 9462 . - . ID=Thapsdraft2028;Parent=Thapsdraft2028;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 9253 9462 . - 0 ID=Thapsdraft2028;Parent=Thapsdraft2028;rank=1 bd_26x41 . exon 9253 9462 . - . ID=Thapsdraft2028.1;Parent=Thapsdraft2028;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 15476 15670 . + . ID=Thapsdraft974;biotype=protein_coding;description=Predicted proteinPutative uncharacterized protein ycf33 [Source:UniProtKB/TrEMBL%3BAcc:A0T0S4];external_name=YCF33;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 15476 15670 . + . ID=Thapsdraft974;Parent=Thapsdraft974;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 15476 15670 . + 0 ID=Thapsdraft974;Parent=Thapsdraft974;rank=1 bd_26x41 . exon 15476 15670 . + . ID=Thapsdraft974.1;Parent=Thapsdraft974;constitutive=1;rank=1 bd_26x41 . repeat_region 18641 18700 . ? . description=dust bd_26x41 . repeat_region 20016 20078 . ? . description=dust bd_26x41 . repeat_region 20175 20224 . ? . description=dust bd_26x41 . repeat_region 21548 21555 . ? . description=dust bd_26x41 . repeat_region 23957 23985 . ? . description=trf bd_26x41 . repeat_region 25231 25356 . ? . description=dust bd_26x41 . repeat_region 25234 25278 . ? . description=trf bd_26x41 . repeat_region 25577 25584 . ? . description=dust bd_26x41 . repeat_region 26022 26030 . ? . description=dust bd_26x41 . repeat_region 26086 26127 . ? . description=dust bd_26x41 . repeat_region 26529 26600 . ? . description=dust bd_26x41 . repeat_region 26666 26716 . ? . description=dust bd_26x41 . repeat_region 27153 27214 . ? . description=dust bd_26x41 . repeat_region 27302 27327 . ? . description=dust bd_26x41 . repeat_region 27348 27379 . ? . description=dust bd_26x41 ensembl protein_coding_gene 24942 25136 . - . ID=Thapsdraft1243;biotype=protein_coding;description=50S ribosomal protein L33%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0R3];external_name=RPL33;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 24942 25136 . - . ID=Thapsdraft1243;Parent=Thapsdraft1243;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 24942 25136 . - 0 ID=Thapsdraft1243;Parent=Thapsdraft1243;rank=1 bd_26x41 . exon 24942 25136 . - . ID=Thapsdraft1243.1;Parent=Thapsdraft1243;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 24719 24937 . - . ID=Thapsdraft1251;biotype=protein_coding;description=30S ribosomal protein S18%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0R4];external_name=RR18;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 24719 24937 . - . ID=Thapsdraft1251;Parent=Thapsdraft1251;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 24719 24937 . - 0 ID=Thapsdraft1251;Parent=Thapsdraft1251;rank=1 bd_26x41 . exon 24719 24937 . - . ID=Thapsdraft1251.1;Parent=Thapsdraft1251;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 26138 30298 . + . ID=Thapsdraft1267;biotype=protein_coding;description=Putative uncharacterized protein RPOB [Source:UniProtKB/TrEMBL%3BAcc:B8LEQ0];external_name=RPOB;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 26138 30298 . + . ID=Thapsdraft1267;Parent=Thapsdraft1267;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 26138 26636 . + 0 ID=Thapsdraft1267;Parent=Thapsdraft1267;rank=1 bd_26x41 . exon 26138 26636 . + . ID=Thapsdraft1267.1;Parent=Thapsdraft1267;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . CDS 26721 30298 . + 0 ID=Thapsdraft1267;Parent=Thapsdraft1267;rank=2 bd_26x41 . exon 26721 30298 . + . ID=Thapsdraft1267.2;Parent=Thapsdraft1267;constitutive=1;ensembl_end_phase=2;rank=2 bd_26x41 ensembl protein_coding_gene 24120 24674 . - . ID=Thapsdraft1435;biotype=protein_coding;description=Photosystem I assembly protein ycf3 [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0R5];external_name=YCF3;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 24120 24674 . - . ID=Thapsdraft1435;Parent=Thapsdraft1435;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 24120 24674 . - 0 ID=Thapsdraft1435;Parent=Thapsdraft1435;rank=1 bd_26x41 . exon 24120 24674 . - . ID=Thapsdraft1435.1;Parent=Thapsdraft1435;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 22528 23952 . - . ID=Thapsdraft1563;biotype=protein_coding;description=ATP synthase subunit beta%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0R6];external_name=ATPB;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 22528 23952 . - . ID=Thapsdraft1563;Parent=Thapsdraft1563;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 22528 23952 . - 0 ID=Thapsdraft1563;Parent=Thapsdraft1563;rank=1 bd_26x41 . exon 22528 23952 . - . ID=Thapsdraft1563.1;Parent=Thapsdraft1563;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 20265 21209 . - . ID=Thapsdraft573;biotype=protein_coding;description=Apocytochrome f [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0R9];external_name=PETA;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 20265 21209 . - . ID=Thapsdraft573;Parent=Thapsdraft573;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 20265 21209 . - 0 ID=Thapsdraft573;Parent=Thapsdraft573;rank=1 bd_26x41 . exon 20265 21209 . - . ID=Thapsdraft573.1;Parent=Thapsdraft573;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 18343 18645 . + . ID=Thapsdraft977;biotype=protein_coding;description=30S ribosomal protein S14%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0S2];external_name=RR14;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 18343 18645 . + . ID=Thapsdraft977;Parent=Thapsdraft977;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 18343 18645 . + 0 ID=Thapsdraft977;Parent=Thapsdraft977;rank=1 bd_26x41 . exon 18343 18645 . + . ID=Thapsdraft977.1;Parent=Thapsdraft977;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 18925 19986 . + . ID=Thapsdraft980;biotype=protein_coding;description=Magnesium-chelatase subunit IMg-protoporphyrin IX chelatase [Source:UniProtKB/TrEMBL%3BAcc:A0T0S0];external_name=CHLI;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 18925 19986 . + . ID=Thapsdraft980;Parent=Thapsdraft980;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 18925 19986 . + 0 ID=Thapsdraft980;Parent=Thapsdraft980;rank=1 bd_26x41 . exon 18925 19986 . + . ID=Thapsdraft980.1;Parent=Thapsdraft980;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 25370 25638 . + . ID=Thapsdraft989;biotype=protein_coding;description=30S ribosomal protein S20%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0R2];external_name=RR20;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 25370 25638 . + . ID=Thapsdraft989;Parent=Thapsdraft989;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 25370 25638 . + 0 ID=Thapsdraft989;Parent=Thapsdraft989;rank=1 bd_26x41 . exon 25370 25638 . + . ID=Thapsdraft989.1;Parent=Thapsdraft989;constitutive=1;ensembl_end_phase=2;rank=1 bd_26x41 ensembl protein_coding_gene 32550 36890 . + . ID=Thapsdraft2050;biotype=protein_coding;description=DNA-directed RNA polymerase subunit beta'' [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0Q9];external_name=RPOC2;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 32550 36890 . + . ID=Thapsdraft2050;Parent=Thapsdraft2050;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 32550 36890 . + 0 ID=Thapsdraft2050;Parent=Thapsdraft2050;rank=1 bd_26x41 . exon 32550 36890 . + . ID=Thapsdraft2050.1;Parent=Thapsdraft2050;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 30308 32506 . + . ID=Thapsdraft997;biotype=protein_coding;description=DNA-directed RNA polymerase subunit beta' [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0R0];external_name=RPOC;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 30308 32506 . + . ID=Thapsdraft997;Parent=Thapsdraft997;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 30308 30551 . + 0 ID=Thapsdraft997;Parent=Thapsdraft997;rank=1 bd_26x41 . exon 30308 30551 . + . ID=Thapsdraft997.1;Parent=Thapsdraft997;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . CDS 30579 31124 . + 0 ID=Thapsdraft997;Parent=Thapsdraft997;rank=2 bd_26x41 . exon 30579 31124 . + . ID=Thapsdraft997.2;Parent=Thapsdraft997;constitutive=1;rank=2 bd_26x41 . CDS 31152 31529 . + 0 ID=Thapsdraft997;Parent=Thapsdraft997;rank=3 bd_26x41 . exon 31152 31529 . + . ID=Thapsdraft997.3;Parent=Thapsdraft997;constitutive=1;rank=3 bd_26x41 . CDS 31560 31799 . + 0 ID=Thapsdraft997;Parent=Thapsdraft997;rank=4 bd_26x41 . exon 31560 31799 . + . ID=Thapsdraft997.4;Parent=Thapsdraft997;constitutive=1;rank=4 bd_26x41 . CDS 31824 32506 . + 0 ID=Thapsdraft997;Parent=Thapsdraft997;rank=5 bd_26x41 . exon 31824 32506 . + . ID=Thapsdraft997.5;Parent=Thapsdraft997;constitutive=1;ensembl_end_phase=2;rank=5 bd_26x41 . repeat_region 36847 36885 . ? . description=dust bd_26x41 . repeat_region 37772 37833 . ? . description=dust bd_26x41 . repeat_region 38221 38283 . ? . description=dust bd_26x41 . repeat_region 38921 38949 . ? . description=dust bd_26x41 . repeat_region 39420 39491 . ? . description=dust bd_26x41 . repeat_region 40345 40352 . ? . description=dust bd_26x41 . repeat_region 40573 40613 . ? . description=dust bd_26x41 . repeat_region 41071 41084 . ? . description=dust bd_26x41 . repeat_region 41385 41399 . ? . description=dust bd_26x41 . repeat_region 41814 41821 . ? . description=dust bd_26x41 . repeat_region 41853 41901 . ? . description=dust bd_26x41 . repeat_region 42399 42465 . ? . description=dust bd_26x41 . repeat_region 43691 43703 . ? . description=dust bd_26x41 . repeat_region 44006 44074 . ? . description=dust bd_26x41 . repeat_region 44199 44206 . ? . description=dust bd_26x41 . repeat_region 44572 44580 . ? . description=dust bd_26x41 . repeat_region 44773 44816 . ? . description=trf bd_26x41 . repeat_region 44777 44816 . ? . description=dust bd_26x41 . repeat_region 45054 45105 . ? . description=trf bd_26x41 . repeat_region 45064 45091 . ? . description=dust bd_26x41 . repeat_region 45449 45489 . ? . description=dust bd_26x41 ensembl tRNA_gene 41518 41590 . - . ID=EPrTPOG00000000002;biotype=tRNA;description=tRNA-Phe for anticodon GAA [Source:TRNASCAN_SE%3BAcc:tRNA-Phe];external_name=tRNA-Phe;logic_name=ncrna_eg bd_26x41 ensembl transcript 41518 41590 . - . ID=EPrTPOT00000000028;Parent=EPrTPOG00000000002;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 45162 45234 . - . ID=EPrTPOG00000000039;biotype=tRNA;description=tRNA-Arg for anticodon UCU [Source:TRNASCAN_SE%3BAcc:tRNA-Arg];external_name=tRNA-Arg;logic_name=ncrna_eg bd_26x41 ensembl transcript 45162 45234 . - . ID=EPrTPOT00000000039;Parent=EPrTPOG00000000039;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 45247 45318 . - . ID=EPrTPOG00000000050;biotype=tRNA;description=tRNA-Val for anticodon AAC [Source:TRNASCAN_SE%3BAcc:tRNA-Val];external_name=tRNA-Val;logic_name=ncrna_eg bd_26x41 ensembl transcript 45247 45318 . - . ID=EPrTPOT00000000050;Parent=EPrTPOG00000000050;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 39991 40063 . - . ID=EPrTPOG00000000059;biotype=tRNA;description=tRNA-Trp for anticodon CCA [Source:TRNASCAN_SE%3BAcc:tRNA-Trp];external_name=tRNA-Trp;logic_name=ncrna_eg bd_26x41 ensembl transcript 39991 40063 . - . ID=EPrTPOT00000000059;Parent=EPrTPOG00000000059;biotype=tRNA;logic_name=ncrna_eg bd_26x41 . exon 41518 41590 . - . ID=EPrTPOE00000000002;Parent=EPrTPOT00000000028;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . exon 45162 45234 . - . ID=EPrTPOE00000000039;Parent=EPrTPOT00000000039;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . exon 45247 45318 . - . ID=EPrTPOE00000000050;Parent=EPrTPOT00000000050;constitutive=1;rank=1 bd_26x41 . exon 39991 40063 . - . ID=EPrTPOE00000000059;Parent=EPrTPOT00000000059;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 ensembl protein_coding_gene 44063 44698 . - . ID=Thapsdraft1013;biotype=protein_coding;description=Peroxiredoxin%2C thioredoxin peroxidasePutative peroxiredoxin ycf42 [Source:UniProtKB/TrEMBL%3BAcc:A0T0Q0];external_name=YCF42;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 44063 44698 . - . ID=Thapsdraft1013;Parent=Thapsdraft1013;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 44063 44698 . - 0 ID=Thapsdraft1013;Parent=Thapsdraft1013;rank=1 bd_26x41 . exon 44063 44698 . - . ID=Thapsdraft1013.1;Parent=Thapsdraft1013;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 45589 45789 . - . ID=Thapsdraft1313;biotype=protein_coding;description=Photosystem II reaction center protein H [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0P8];external_name=PSBH;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 45589 45789 . - . ID=Thapsdraft1313;Parent=Thapsdraft1313;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 45589 45789 . - 0 ID=Thapsdraft1313;Parent=Thapsdraft1313;rank=1 bd_26x41 . exon 45589 45789 . - . ID=Thapsdraft1313.1;Parent=Thapsdraft1313;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 40145 41515 . + . ID=Thapsdraft1327;biotype=protein_coding;description=DNA replication helicaseDNAB replicative helicase [Source:UniProtKB/TrEMBL%3BAcc:A0T0Q4];external_name=DNAB;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 40145 41515 . + . ID=Thapsdraft1327;Parent=Thapsdraft1327;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 40145 41515 . + 0 ID=Thapsdraft1327;Parent=Thapsdraft1327;rank=1 bd_26x41 . exon 40145 41515 . + . ID=Thapsdraft1327.1;Parent=Thapsdraft1327;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 36972 37655 . + . ID=Thapsdraft1676;biotype=protein_coding;description=30S ribosomal protein S2%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0Q8];external_name=RR2;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 36972 37655 . + . ID=Thapsdraft1676;Parent=Thapsdraft1676;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 36972 37655 . + 0 ID=Thapsdraft1676;Parent=Thapsdraft1676;rank=1 bd_26x41 . exon 36972 37655 . + . ID=Thapsdraft1676.1;Parent=Thapsdraft1676;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 38279 38971 . - . ID=Thapsdraft1911;biotype=protein_coding;description=50S ribosomal protein L1%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0Q6];external_name=RPL1;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 38279 38971 . - . ID=Thapsdraft1911;Parent=Thapsdraft1911;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 38279 38971 . - 0 ID=Thapsdraft1911;Parent=Thapsdraft1911;rank=1 bd_26x41 . exon 38279 38971 . - . ID=Thapsdraft1911.1;Parent=Thapsdraft1911;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 42060 43424 . - . ID=Thapsdraft2063;biotype=protein_coding;description=Putative uncharacterized protein ycf45 [Source:UniProtKB/TrEMBL%3BAcc:A0T0Q3];external_name=YCF45;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 42060 43424 . - . ID=Thapsdraft2063;Parent=Thapsdraft2063;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 42060 43424 . - 0 ID=Thapsdraft2063;Parent=Thapsdraft2063;rank=1 bd_26x41 . exon 42060 43424 . - . ID=Thapsdraft2063.1;Parent=Thapsdraft2063;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 44810 44998 . - . ID=Thapsdraft308;biotype=protein_coding;description=PSAE%2C photosystem I reaction center subunit [Source:UniProtKB/TrEMBL%3BAcc:B8LEQ8];external_name=PSAE;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 44810 44998 . - . ID=Thapsdraft308;Parent=Thapsdraft308;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 44810 44998 . - 0 ID=Thapsdraft308;Parent=Thapsdraft308;rank=1 bd_26x41 . exon 44810 44998 . - . ID=Thapsdraft308.1;Parent=Thapsdraft308;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 49470 50033 . - . ID=Thapsdraft1023;biotype=protein_coding;description=ATP synthase subunit delta%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0P3];external_name=ATPD;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 49470 50033 . - . ID=Thapsdraft1023;Parent=Thapsdraft1023;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 49470 50033 . - 0 ID=Thapsdraft1023;Parent=Thapsdraft1023;rank=1 bd_26x41 . exon 49470 50033 . - . ID=Thapsdraft1023.1;Parent=Thapsdraft1023;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 47911 49422 . - . ID=Thapsdraft1287;biotype=protein_coding;description=ATP synthase subunit alpha%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0P4];external_name=ATPA;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 47911 49422 . - . ID=Thapsdraft1287;Parent=Thapsdraft1287;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 47911 49422 . - 0 ID=Thapsdraft1287;Parent=Thapsdraft1287;rank=1 bd_26x41 . exon 47911 49422 . - . ID=Thapsdraft1287.1;Parent=Thapsdraft1287;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 51271 51519 . - . ID=Thapsdraft1290;biotype=protein_coding;description=ATP synthase subunit c%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0P0];external_name=ATPH;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 51271 51519 . - . ID=Thapsdraft1290;Parent=Thapsdraft1290;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 51271 51519 . - 0 ID=Thapsdraft1290;Parent=Thapsdraft1290;rank=1 bd_26x41 . exon 51271 51519 . - . ID=Thapsdraft1290.1;Parent=Thapsdraft1290;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 50030 50569 . - . ID=Thapsdraft1318;biotype=protein_coding;description=ATP synthase subunit b%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0P2];external_name=ATPF;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 50030 50569 . - . ID=Thapsdraft1318;Parent=Thapsdraft1318;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 50030 50569 . - 0 ID=Thapsdraft1318;Parent=Thapsdraft1318;rank=1 bd_26x41 . exon 50030 50569 . - . ID=Thapsdraft1318.1;Parent=Thapsdraft1318;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 52442 53197 . - . ID=Thapsdraft1319;biotype=protein_coding;description=Iron-sulfur cluster formation ABC transporter ATP-binding subunitPlastid protein [Source:UniProtKB/TrEMBL%3BAcc:A0T0N8];external_name=SUFC;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 52442 53197 . - . ID=Thapsdraft1319;Parent=Thapsdraft1319;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 52442 53197 . - 0 ID=Thapsdraft1319;Parent=Thapsdraft1319;rank=1 bd_26x41 . exon 52442 53197 . - . ID=Thapsdraft1319.1;Parent=Thapsdraft1319;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 53197 54654 . - . ID=Thapsdraft1360;biotype=protein_coding;description=Iron-sulfur cluster formation ABC transporterPlastid protein [Source:UniProtKB/TrEMBL%3BAcc:A0T0N7];external_name=SUFB;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 53197 54654 . - . ID=Thapsdraft1360;Parent=Thapsdraft1360;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 53197 54654 . - 0 ID=Thapsdraft1360;Parent=Thapsdraft1360;rank=1 bd_26x41 . exon 53197 54654 . - . ID=Thapsdraft1360.1;Parent=Thapsdraft1360;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 51585 52313 . - . ID=Thapsdraft1378;biotype=protein_coding;description=ATP synthase subunit a%2C chloroplastic 1 [Source:UniProtKB/TrEMBL%3BAcc:A0T0N9];external_name=ATPI;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 51585 52313 . - . ID=Thapsdraft1378;Parent=Thapsdraft1378;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 51585 52313 . - 0 ID=Thapsdraft1378;Parent=Thapsdraft1378;rank=1 bd_26x41 . exon 51585 52313 . - . ID=Thapsdraft1378.1;Parent=Thapsdraft1378;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 46181 47710 . - . ID=Thapsdraft2073;biotype=protein_coding;description=Photosystem II CP47 chlorophyll apoprotein [Source:UniProtKB/TrEMBL%3BAcc:A0T0P5];external_name=PSBB;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 46181 47710 . - . ID=Thapsdraft2073;Parent=Thapsdraft2073;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 46181 47710 . - 0 ID=Thapsdraft2073;Parent=Thapsdraft2073;rank=1 bd_26x41 . exon 46181 47710 . - . ID=Thapsdraft2073.1;Parent=Thapsdraft2073;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 50633 51103 . - . ID=Thapsdraft598;biotype=protein_coding;description=ATP synthase subunit b'%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0P1];external_name=ATPG;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 50633 51103 . - . ID=Thapsdraft598;Parent=Thapsdraft598;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 50633 51103 . - 0 ID=Thapsdraft598;Parent=Thapsdraft598;rank=1 bd_26x41 . exon 50633 51103 . - . ID=Thapsdraft598.1;Parent=Thapsdraft598;constitutive=1;rank=1 bd_26x41 . repeat_region 54737 54832 . ? . description=dust bd_26x41 . repeat_region 56946 57033 . ? . description=dust bd_26x41 . repeat_region 57047 57055 . ? . description=dust bd_26x41 . repeat_region 57127 57136 . ? . description=dust bd_26x41 . repeat_region 58998 59061 . ? . description=dust bd_26x41 . repeat_region 59565 59578 . ? . description=dust bd_26x41 . repeat_region 60090 60140 . ? . description=dust bd_26x41 . repeat_region 60157 60213 . ? . description=dust bd_26x41 . repeat_region 62527 62573 . ? . description=dust bd_26x41 ensembl tRNA_gene 58910 58994 . + . ID=EPrTPOG00000000061;biotype=tRNA;description=tRNA-Met for anticodon CAU [Source:TRNASCAN_SE%3BAcc:tRNA-Met];external_name=tRNA-Met;logic_name=ncrna_eg bd_26x41 ensembl transcript 58910 58994 . + . ID=EPrTPOT00000000061;Parent=EPrTPOG00000000061;biotype=tRNA;logic_name=ncrna_eg bd_26x41 ensembl gene 58565 58907 . + . ID=EPrTPOG00000000081;biotype=tmRNA;description=tmRNA [Source:RFAM%3BAcc:RF00023];external_name=tmRNA;logic_name=ncrna_eg bd_26x41 ensembl transcript 58565 58907 . + . ID=EPrTPOT00000000081;Parent=EPrTPOG00000000081;biotype=tmRNA;logic_name=ncrna_eg bd_26x41 ensembl tRNA_gene 58438 58510 . + . ID=EPrTPOG00000000092;biotype=tRNA;description=tRNA-Arg for anticodon UCU [Source:TRNASCAN_SE%3BAcc:tRNA-Arg];external_name=tRNA-Arg;logic_name=ncrna_eg bd_26x41 ensembl transcript 58438 58510 . + . ID=EPrTPOT00000000092;Parent=EPrTPOG00000000092;biotype=tRNA;logic_name=ncrna_eg bd_26x41 . exon 58910 58994 . + . ID=EPrTPOE00000000061;Parent=EPrTPOT00000000061;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . exon 58565 58907 . + . ID=EPrTPOE00000000081;Parent=EPrTPOT00000000081;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 . exon 58438 58510 . + . ID=EPrTPOE00000000092;Parent=EPrTPOT00000000092;constitutive=1;ensembl_end_phase=1;rank=1 bd_26x41 ensembl protein_coding_gene 57483 57794 . + . ID=Thapsdraft1037;biotype=protein_coding;description=Predicted proteinPutative uncharacterized protein ycf66 [Source:UniProtKB/TrEMBL%3BAcc:A0T0N3];external_name=YCF66;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 57483 57794 . + . ID=Thapsdraft1037;Parent=Thapsdraft1037;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 57483 57794 . + 0 ID=Thapsdraft1037;Parent=Thapsdraft1037;rank=1 bd_26x41 . exon 57483 57794 . + . ID=Thapsdraft1037.1;Parent=Thapsdraft1037;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 57844 58335 . + . ID=Thapsdraft1039;biotype=protein_coding;description=Cytochrome c-550 [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0N2];external_name=PSBV;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 57844 58335 . + . ID=Thapsdraft1039;Parent=Thapsdraft1039;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 57844 58335 . + 0 ID=Thapsdraft1039;Parent=Thapsdraft1039;rank=1 bd_26x41 . exon 57844 58335 . + . ID=Thapsdraft1039.1;Parent=Thapsdraft1039;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 59756 60055 . + . ID=Thapsdraft1258;biotype=protein_coding;description=Ferredoxin [Source:UniProtKB/TrEMBL%3BAcc:A0T0N0];external_name=PETF;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 59756 60055 . + . ID=Thapsdraft1258;Parent=Thapsdraft1258;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 59756 60055 . + 0 ID=Thapsdraft1258;Parent=Thapsdraft1258;rank=1 bd_26x41 . exon 59756 60055 . + . ID=Thapsdraft1258.1;Parent=Thapsdraft1258;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 59081 59443 . + . ID=Thapsdraft1396;biotype=protein_coding;description=50S ribosomal protein L19%2C chloroplastic [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0N1];external_name=RK19;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 59081 59443 . + . ID=Thapsdraft1396;Parent=Thapsdraft1396;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 59081 59443 . + 0 ID=Thapsdraft1396;Parent=Thapsdraft1396;rank=1 bd_26x41 . exon 59081 59443 . + . ID=Thapsdraft1396.1;Parent=Thapsdraft1396;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 60239 62440 . - . ID=Thapsdraft1611;biotype=protein_coding;description=Photosystem I P700 chlorophyll a apoprotein A2 [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0M9];external_name=PSAB;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 60239 62440 . - . ID=Thapsdraft1611;Parent=Thapsdraft1611;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 60239 62440 . - 0 ID=Thapsdraft1611;Parent=Thapsdraft1611;rank=1 bd_26x41 . exon 60239 62440 . - . ID=Thapsdraft1611.1;Parent=Thapsdraft1611;constitutive=1;rank=1 bd_26x41 ensembl protein_coding_gene 54942 56414 . + . ID=Thapsdraft2088;biotype=protein_coding;description=Ribulose bisphosphate carboxylase large chain [Source:UniProtKB/Swiss-Prot%3BAcc:A0T0N6];external_name=RBCL;logic_name=jgi_thaps3 bd_26x41 ensembl transcript 54942 56414 . + . ID=Thapsdraft2088;Parent=Thapsdraft2088;biotype=protein_coding;logic_name=jgi_thaps3 bd_26x41 . CDS 54942 56414 . + 0 ID=Thapsdraft2088;Parent=Thapsdraft2088;rank=1 bd_26x41 . exon 54942 56414 . + . ID=Thapsdraft2088.1;Parent=Thapsdraft2088;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_19x4 1 66660 bd_19x4 . repeat_region 6002 6010 . ? . description=dust bd_19x4 ensembl protein_coding_gene 4023 5096 . - . ID=Thapsdraft1845;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEG0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 4023 5096 . - . ID=Thapsdraft1845;Parent=Thapsdraft1845;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 4023 5096 . - 0 ID=Thapsdraft1845;Parent=Thapsdraft1845;rank=1 bd_19x4 . exon 4023 5096 . - . ID=Thapsdraft1845.1;Parent=Thapsdraft1845;constitutive=1;rank=1 bd_19x4 ensembl protein_coding_gene 639 1694 . - . ID=Thapsdraft833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 639 1694 . - . ID=Thapsdraft833;Parent=Thapsdraft833;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 639 1694 . - 0 ID=Thapsdraft833;Parent=Thapsdraft833;rank=1 bd_19x4 . exon 639 1694 . - . ID=Thapsdraft833.1;Parent=Thapsdraft833;constitutive=1;rank=1 bd_19x4 ensembl protein_coding_gene 9089 10420 . + . ID=Thapsdraft835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEG1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 9089 10420 . + . ID=Thapsdraft835;Parent=Thapsdraft835;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 9089 9395 . + 0 ID=Thapsdraft835;Parent=Thapsdraft835;rank=1 bd_19x4 . exon 9089 9395 . + . ID=Thapsdraft835.1;Parent=Thapsdraft835;constitutive=1;ensembl_end_phase=1;rank=1 bd_19x4 . CDS 9483 10420 . + 0 ID=Thapsdraft835;Parent=Thapsdraft835;rank=2 bd_19x4 . exon 9483 10420 . + . ID=Thapsdraft835.2;Parent=Thapsdraft835;constitutive=1;ensembl_end_phase=2;rank=2 bd_19x4 ensembl protein_coding_gene 16143 18658 . + . ID=Thapsdraft1662;biotype=protein_coding;description=Sodium/potassium/calcium exchange protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEG5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 16143 18658 . + . ID=Thapsdraft1662;Parent=Thapsdraft1662;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 16143 17270 . + 0 ID=Thapsdraft1662;Parent=Thapsdraft1662;rank=1 bd_19x4 . exon 16143 17270 . + . ID=Thapsdraft1662.1;Parent=Thapsdraft1662;constitutive=1;rank=1 bd_19x4 . CDS 17539 17715 . + 0 ID=Thapsdraft1662;Parent=Thapsdraft1662;rank=2 bd_19x4 . exon 17539 17715 . + . ID=Thapsdraft1662.2;Parent=Thapsdraft1662;constitutive=1;rank=2 bd_19x4 . CDS 17964 18356 . + 0 ID=Thapsdraft1662;Parent=Thapsdraft1662;rank=3 bd_19x4 . exon 17964 18356 . + . ID=Thapsdraft1662.3;Parent=Thapsdraft1662;constitutive=1;rank=3 bd_19x4 . CDS 18473 18658 . + 0 ID=Thapsdraft1662;Parent=Thapsdraft1662;rank=4 bd_19x4 . exon 18473 18658 . + . ID=Thapsdraft1662.4;Parent=Thapsdraft1662;constitutive=1;rank=4 bd_19x4 ensembl protein_coding_gene 10635 11987 . - . ID=Thapsdraft836;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEG2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 10635 11987 . - . ID=Thapsdraft836;Parent=Thapsdraft836;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 10635 11987 . - 0 ID=Thapsdraft836;Parent=Thapsdraft836;rank=1 bd_19x4 . exon 10635 11987 . - . ID=Thapsdraft836.1;Parent=Thapsdraft836;constitutive=1;rank=1 bd_19x4 ensembl protein_coding_gene 13453 13914 . + . ID=Thapsdraft837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEG3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 13453 13914 . + . ID=Thapsdraft837;Parent=Thapsdraft837;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 13453 13914 . + 0 ID=Thapsdraft837;Parent=Thapsdraft837;rank=1 bd_19x4 . exon 13453 13914 . + . ID=Thapsdraft837.1;Parent=Thapsdraft837;constitutive=1;rank=1 bd_19x4 ensembl protein_coding_gene 15122 15625 . - . ID=Thapsdraft838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEG4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 15122 15625 . - . ID=Thapsdraft838;Parent=Thapsdraft838;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 15122 15625 . - 0 ID=Thapsdraft838;Parent=Thapsdraft838;rank=1 bd_19x4 . exon 15122 15625 . - . ID=Thapsdraft838.1;Parent=Thapsdraft838;constitutive=1;rank=1 bd_19x4 . repeat_region 24756 24785 . ? . description=trf bd_19x4 ensembl protein_coding_gene 26470 30023 . + . ID=Thapsdraft439;biotype=protein_coding;description=DNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8LEG9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 26470 30023 . + . ID=Thapsdraft439;Parent=Thapsdraft439;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 26470 27063 . + 0 ID=Thapsdraft439;Parent=Thapsdraft439;rank=1 bd_19x4 . exon 26470 27063 . + . ID=Thapsdraft439.1;Parent=Thapsdraft439;constitutive=1;rank=1 bd_19x4 . CDS 27088 27261 . + 0 ID=Thapsdraft439;Parent=Thapsdraft439;rank=2 bd_19x4 . exon 27088 27261 . + . ID=Thapsdraft439.2;Parent=Thapsdraft439;constitutive=1;rank=2 bd_19x4 . CDS 27286 28332 . + 0 ID=Thapsdraft439;Parent=Thapsdraft439;rank=3 bd_19x4 . exon 27286 28332 . + . ID=Thapsdraft439.3;Parent=Thapsdraft439;constitutive=1;rank=3 bd_19x4 . CDS 28416 30023 . + 0 ID=Thapsdraft439;Parent=Thapsdraft439;rank=4 bd_19x4 . exon 28416 30023 . + . ID=Thapsdraft439.4;Parent=Thapsdraft439;constitutive=1;rank=4 bd_19x4 ensembl protein_coding_gene 21553 22937 . + . ID=Thapsdraft841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEG6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 21553 22937 . + . ID=Thapsdraft841;Parent=Thapsdraft841;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 21553 21588 . + 0 ID=Thapsdraft841;Parent=Thapsdraft841;rank=1 bd_19x4 . exon 21553 21588 . + . ID=Thapsdraft841.1;Parent=Thapsdraft841;constitutive=1;rank=1 bd_19x4 . CDS 21631 22896 . + 0 ID=Thapsdraft841;Parent=Thapsdraft841;rank=2 bd_19x4 . exon 21631 22896 . + . ID=Thapsdraft841.2;Parent=Thapsdraft841;constitutive=1;rank=2 bd_19x4 . CDS 22920 22937 . + 0 ID=Thapsdraft841;Parent=Thapsdraft841;rank=3 bd_19x4 . exon 22920 22937 . + . ID=Thapsdraft841.3;Parent=Thapsdraft841;constitutive=1;rank=3 bd_19x4 ensembl protein_coding_gene 23005 24210 . - . ID=Thapsdraft842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEG7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 23005 24210 . - . ID=Thapsdraft842;Parent=Thapsdraft842;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 23005 24210 . - 0 ID=Thapsdraft842;Parent=Thapsdraft842;rank=1 bd_19x4 . exon 23005 24210 . - . ID=Thapsdraft842.1;Parent=Thapsdraft842;constitutive=1;rank=1 bd_19x4 ensembl protein_coding_gene 24677 26364 . + . ID=Thapsdraft843;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEG8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 24677 26364 . + . ID=Thapsdraft843;Parent=Thapsdraft843;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 24677 24941 . + 0 ID=Thapsdraft843;Parent=Thapsdraft843;rank=1 bd_19x4 . exon 24677 24941 . + . ID=Thapsdraft843.1;Parent=Thapsdraft843;constitutive=1;ensembl_end_phase=1;rank=1 bd_19x4 . CDS 24973 25194 . + 0 ID=Thapsdraft843;Parent=Thapsdraft843;rank=2 bd_19x4 . exon 24973 25194 . + . ID=Thapsdraft843.2;Parent=Thapsdraft843;constitutive=1;rank=2 bd_19x4 . CDS 25361 26364 . + 0 ID=Thapsdraft843;Parent=Thapsdraft843;rank=3 bd_19x4 . exon 25361 26364 . + . ID=Thapsdraft843.3;Parent=Thapsdraft843;constitutive=1;ensembl_end_phase=2;rank=3 bd_19x4 . repeat_region 35683 35730 . + . description=TE2c_TP bd_19x4 . repeat_region 35731 35934 . + . description=TE2c_TP bd_19x4 . repeat_region 35841 35957 . - . description=TE2c_TP bd_19x4 ensembl protein_coding_gene 32276 32832 . + . ID=Thapsdraft258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEE8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 32276 32832 . + . ID=Thapsdraft258;Parent=Thapsdraft258;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 32276 32371 . + 0 ID=Thapsdraft258;Parent=Thapsdraft258;rank=1 bd_19x4 . exon 32276 32371 . + . ID=Thapsdraft258.1;Parent=Thapsdraft258;constitutive=1;rank=1 bd_19x4 . CDS 32674 32832 . + 0 ID=Thapsdraft258;Parent=Thapsdraft258;rank=2 bd_19x4 . exon 32674 32832 . + . ID=Thapsdraft258.2;Parent=Thapsdraft258;constitutive=1;rank=2 bd_19x4 ensembl protein_coding_gene 30733 31281 . - . ID=Thapsdraft846;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEH0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 30733 31281 . - . ID=Thapsdraft846;Parent=Thapsdraft846;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 30733 31281 . - 0 ID=Thapsdraft846;Parent=Thapsdraft846;rank=1 bd_19x4 . exon 30733 31281 . - . ID=Thapsdraft846.1;Parent=Thapsdraft846;constitutive=1;rank=1 bd_19x4 ensembl protein_coding_gene 36341 38767 . + . ID=Thapsdraft848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEE9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 36341 38767 . + . ID=Thapsdraft848;Parent=Thapsdraft848;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 36341 37241 . + 0 ID=Thapsdraft848;Parent=Thapsdraft848;rank=1 bd_19x4 . exon 36341 37241 . + . ID=Thapsdraft848.1;Parent=Thapsdraft848;constitutive=1;ensembl_end_phase=1;rank=1 bd_19x4 . CDS 37369 37740 . + 0 ID=Thapsdraft848;Parent=Thapsdraft848;rank=2 bd_19x4 . exon 37369 37740 . + . ID=Thapsdraft848.2;Parent=Thapsdraft848;constitutive=1;rank=2 bd_19x4 . CDS 37830 38767 . + 0 ID=Thapsdraft848;Parent=Thapsdraft848;rank=3 bd_19x4 . exon 37830 38767 . + . ID=Thapsdraft848.3;Parent=Thapsdraft848;constitutive=1;ensembl_end_phase=2;rank=3 bd_19x4 . repeat_region 41474 41520 . ? . description=trf bd_19x4 . repeat_region 42911 42950 . ? . description=trf bd_19x4 . repeat_region 43151 43189 . ? . description=dust bd_19x4 . repeat_region 47410 47417 . ? . description=dust bd_19x4 ensembl protein_coding_gene 39034 43786 . - . ID=Thapsdraft1849;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 39034 43786 . - . ID=Thapsdraft1849;Parent=Thapsdraft1849;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 39034 41080 . - 0 ID=Thapsdraft1849;Parent=Thapsdraft1849;rank=4 bd_19x4 . exon 39034 41080 . - . ID=Thapsdraft1849.4;Parent=Thapsdraft1849;constitutive=1;ensembl_end_phase=1;rank=4 bd_19x4 . CDS 41167 41851 . - 0 ID=Thapsdraft1849;Parent=Thapsdraft1849;rank=3 bd_19x4 . exon 41167 41851 . - . ID=Thapsdraft1849.3;Parent=Thapsdraft1849;constitutive=1;ensembl_end_phase=1;rank=3 bd_19x4 . CDS 41960 43063 . - 0 ID=Thapsdraft1849;Parent=Thapsdraft1849;rank=2 bd_19x4 . exon 41960 43063 . - . ID=Thapsdraft1849.2;Parent=Thapsdraft1849;constitutive=1;rank=2 bd_19x4 . CDS 43573 43786 . - 0 ID=Thapsdraft1849;Parent=Thapsdraft1849;rank=1 bd_19x4 . exon 43573 43786 . - . ID=Thapsdraft1849.1;Parent=Thapsdraft1849;constitutive=1;ensembl_end_phase=1;rank=1 bd_19x4 ensembl protein_coding_gene 44238 46492 . + . ID=Thapsdraft850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 44238 46492 . + . ID=Thapsdraft850;Parent=Thapsdraft850;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 44238 44367 . + 0 ID=Thapsdraft850;Parent=Thapsdraft850;rank=1 bd_19x4 . exon 44238 44367 . + . ID=Thapsdraft850.1;Parent=Thapsdraft850;constitutive=1;ensembl_end_phase=1;rank=1 bd_19x4 . CDS 44451 46492 . + 0 ID=Thapsdraft850;Parent=Thapsdraft850;rank=2 bd_19x4 . exon 44451 46492 . + . ID=Thapsdraft850.2;Parent=Thapsdraft850;constitutive=1;ensembl_end_phase=2;rank=2 bd_19x4 ensembl protein_coding_gene 46714 47703 . - . ID=Thapsdraft851;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 46714 47703 . - . ID=Thapsdraft851;Parent=Thapsdraft851;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 46714 47312 . - 0 ID=Thapsdraft851;Parent=Thapsdraft851;rank=2 bd_19x4 . exon 46714 47312 . - . ID=Thapsdraft851.2;Parent=Thapsdraft851;constitutive=1;ensembl_end_phase=2;rank=2 bd_19x4 . CDS 47430 47703 . - 0 ID=Thapsdraft851;Parent=Thapsdraft851;rank=1 bd_19x4 . exon 47430 47703 . - . ID=Thapsdraft851.1;Parent=Thapsdraft851;constitutive=1;ensembl_end_phase=1;rank=1 bd_19x4 ensembl protein_coding_gene 49687 50874 . - . ID=Thapsdraft1850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 49687 50874 . - . ID=Thapsdraft1850;Parent=Thapsdraft1850;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 49687 49920 . - 0 ID=Thapsdraft1850;Parent=Thapsdraft1850;rank=3 bd_19x4 . exon 49687 49920 . - . ID=Thapsdraft1850.3;Parent=Thapsdraft1850;constitutive=1;rank=3 bd_19x4 . CDS 50064 50133 . - 0 ID=Thapsdraft1850;Parent=Thapsdraft1850;rank=2 bd_19x4 . exon 50064 50133 . - . ID=Thapsdraft1850.2;Parent=Thapsdraft1850;constitutive=1;ensembl_end_phase=1;rank=2 bd_19x4 . CDS 50699 50874 . - 0 ID=Thapsdraft1850;Parent=Thapsdraft1850;rank=1 bd_19x4 . exon 50699 50874 . - . ID=Thapsdraft1850.1;Parent=Thapsdraft1850;constitutive=1;ensembl_end_phase=2;rank=1 bd_19x4 ensembl protein_coding_gene 53049 53576 . + . ID=Thapsdraft853;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 53049 53576 . + . ID=Thapsdraft853;Parent=Thapsdraft853;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 53049 53576 . + 0 ID=Thapsdraft853;Parent=Thapsdraft853;rank=1 bd_19x4 . exon 53049 53576 . + . ID=Thapsdraft853.1;Parent=Thapsdraft853;constitutive=1;rank=1 bd_19x4 . repeat_region 61225 61278 . ? . description=dust bd_19x4 . repeat_region 61255 61278 . ? . description=trf bd_19x4 . repeat_region 61435 61442 . ? . description=dust bd_19x4 . repeat_region 64430 64479 . ? . description=dust bd_19x4 ensembl protein_coding_gene 57711 58766 . + . ID=Thapsdraft1851;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 57711 58766 . + . ID=Thapsdraft1851;Parent=Thapsdraft1851;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 57711 58766 . + 0 ID=Thapsdraft1851;Parent=Thapsdraft1851;rank=1 bd_19x4 . exon 57711 58766 . + . ID=Thapsdraft1851.1;Parent=Thapsdraft1851;constitutive=1;rank=1 bd_19x4 ensembl protein_coding_gene 59100 60332 . - . ID=Thapsdraft1852;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 59100 60332 . - . ID=Thapsdraft1852;Parent=Thapsdraft1852;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 59100 60332 . - 0 ID=Thapsdraft1852;Parent=Thapsdraft1852;rank=1 bd_19x4 . exon 59100 60332 . - . ID=Thapsdraft1852.1;Parent=Thapsdraft1852;constitutive=1;rank=1 bd_19x4 ensembl protein_coding_gene 63000 64718 . + . ID=Thapsdraft856;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 63000 64718 . + . ID=Thapsdraft856;Parent=Thapsdraft856;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 63000 63837 . + 0 ID=Thapsdraft856;Parent=Thapsdraft856;rank=1 bd_19x4 . exon 63000 63837 . + . ID=Thapsdraft856.1;Parent=Thapsdraft856;constitutive=1;ensembl_end_phase=1;rank=1 bd_19x4 . CDS 63947 64393 . + 0 ID=Thapsdraft856;Parent=Thapsdraft856;rank=2 bd_19x4 . exon 63947 64393 . + . ID=Thapsdraft856.2;Parent=Thapsdraft856;constitutive=1;rank=2 bd_19x4 . CDS 64642 64718 . + 0 ID=Thapsdraft856;Parent=Thapsdraft856;rank=3 bd_19x4 . exon 64642 64718 . + . ID=Thapsdraft856.3;Parent=Thapsdraft856;constitutive=1;ensembl_end_phase=2;rank=3 bd_19x4 ensembl protein_coding_gene 65813 66544 . - . ID=Thapsdraft857;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEF8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_19x4 ensembl transcript 65813 66544 . - . ID=Thapsdraft857;Parent=Thapsdraft857;biotype=protein_coding;logic_name=jgi_thaps3 bd_19x4 . CDS 65813 66544 . - 0 ID=Thapsdraft857;Parent=Thapsdraft857;rank=1 bd_19x4 . exon 65813 66544 . - . ID=Thapsdraft857.1;Parent=Thapsdraft857;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_32x49 1 70851 bd_32x49 . repeat_region 2399 3260 . ? . description=dust bd_32x49 . repeat_region 4028 4863 . ? . description=dust bd_32x49 ensembl protein_coding_gene 2072 8905 . + . ID=Thapsdraft1940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEW4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 2072 8905 . + . ID=Thapsdraft1940;Parent=Thapsdraft1940;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 2072 2164 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=1 bd_32x49 . exon 2072 2164 . + . ID=Thapsdraft1940.1;Parent=Thapsdraft1940;constitutive=1;rank=1 bd_32x49 . CDS 2250 2285 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=2 bd_32x49 . exon 2250 2285 . + . ID=Thapsdraft1940.2;Parent=Thapsdraft1940;constitutive=1;rank=2 bd_32x49 . CDS 3522 3557 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=3 bd_32x49 . exon 3522 3557 . + . ID=Thapsdraft1940.3;Parent=Thapsdraft1940;constitutive=1;rank=3 bd_32x49 . CDS 3654 3713 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=4 bd_32x49 . exon 3654 3713 . + . ID=Thapsdraft1940.4;Parent=Thapsdraft1940;constitutive=1;rank=4 bd_32x49 . CDS 3828 3887 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=5 bd_32x49 . exon 3828 3887 . + . ID=Thapsdraft1940.5;Parent=Thapsdraft1940;constitutive=1;rank=5 bd_32x49 . CDS 5489 5524 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=6 bd_32x49 . exon 5489 5524 . + . ID=Thapsdraft1940.6;Parent=Thapsdraft1940;constitutive=1;rank=6 bd_32x49 . CDS 5670 5729 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=7 bd_32x49 . exon 5670 5729 . + . ID=Thapsdraft1940.7;Parent=Thapsdraft1940;constitutive=1;rank=7 bd_32x49 . CDS 5836 5895 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=8 bd_32x49 . exon 5836 5895 . + . ID=Thapsdraft1940.8;Parent=Thapsdraft1940;constitutive=1;rank=8 bd_32x49 . CDS 5978 6073 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=9 bd_32x49 . exon 5978 6073 . + . ID=Thapsdraft1940.9;Parent=Thapsdraft1940;constitutive=1;rank=9 bd_32x49 . CDS 6211 6312 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=10 bd_32x49 . exon 6211 6312 . + . ID=Thapsdraft1940.10;Parent=Thapsdraft1940;constitutive=1;rank=10 bd_32x49 . CDS 6401 6460 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=11 bd_32x49 . exon 6401 6460 . + . ID=Thapsdraft1940.11;Parent=Thapsdraft1940;constitutive=1;rank=11 bd_32x49 . CDS 6556 6615 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=12 bd_32x49 . exon 6556 6615 . + . ID=Thapsdraft1940.12;Parent=Thapsdraft1940;constitutive=1;rank=12 bd_32x49 . CDS 6750 6809 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=13 bd_32x49 . exon 6750 6809 . + . ID=Thapsdraft1940.13;Parent=Thapsdraft1940;constitutive=1;rank=13 bd_32x49 . CDS 6924 7007 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=14 bd_32x49 . exon 6924 7007 . + . ID=Thapsdraft1940.14;Parent=Thapsdraft1940;constitutive=1;rank=14 bd_32x49 . CDS 7127 7186 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=15 bd_32x49 . exon 7127 7186 . + . ID=Thapsdraft1940.15;Parent=Thapsdraft1940;constitutive=1;rank=15 bd_32x49 . CDS 7424 7459 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=16 bd_32x49 . exon 7424 7459 . + . ID=Thapsdraft1940.16;Parent=Thapsdraft1940;constitutive=1;rank=16 bd_32x49 . CDS 7764 7799 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=17 bd_32x49 . exon 7764 7799 . + . ID=Thapsdraft1940.17;Parent=Thapsdraft1940;constitutive=1;rank=17 bd_32x49 . CDS 7869 7904 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=18 bd_32x49 . exon 7869 7904 . + . ID=Thapsdraft1940.18;Parent=Thapsdraft1940;constitutive=1;rank=18 bd_32x49 . CDS 8038 8085 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=19 bd_32x49 . exon 8038 8085 . + . ID=Thapsdraft1940.19;Parent=Thapsdraft1940;constitutive=1;rank=19 bd_32x49 . CDS 8117 8255 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=20 bd_32x49 . exon 8117 8255 . + . ID=Thapsdraft1940.20;Parent=Thapsdraft1940;constitutive=1;ensembl_end_phase=1;rank=20 bd_32x49 . CDS 8430 8489 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=21 bd_32x49 . exon 8430 8489 . + . ID=Thapsdraft1940.21;Parent=Thapsdraft1940;constitutive=1;rank=21 bd_32x49 . CDS 8596 8655 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=22 bd_32x49 . exon 8596 8655 . + . ID=Thapsdraft1940.22;Parent=Thapsdraft1940;constitutive=1;rank=22 bd_32x49 . CDS 8738 8833 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=23 bd_32x49 . exon 8738 8833 . + . ID=Thapsdraft1940.23;Parent=Thapsdraft1940;constitutive=1;rank=23 bd_32x49 . CDS 8895 8905 . + 0 ID=Thapsdraft1940;Parent=Thapsdraft1940;rank=24 bd_32x49 . exon 8895 8905 . + . ID=Thapsdraft1940.24;Parent=Thapsdraft1940;constitutive=1;ensembl_end_phase=2;rank=24 bd_32x49 . repeat_region 8957 23859 . ? . description=dust bd_32x49 . repeat_region 26235 26242 . ? . description=dust bd_32x49 ensembl protein_coding_gene 24362 27164 . + . ID=Thapsdraft1941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEW5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 24362 27164 . + . ID=Thapsdraft1941;Parent=Thapsdraft1941;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 24362 24400 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=1 bd_32x49 . exon 24362 24400 . + . ID=Thapsdraft1941.1;Parent=Thapsdraft1941;constitutive=1;rank=1 bd_32x49 . CDS 24535 24558 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=2 bd_32x49 . exon 24535 24558 . + . ID=Thapsdraft1941.2;Parent=Thapsdraft1941;constitutive=1;rank=2 bd_32x49 . CDS 24719 24742 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=3 bd_32x49 . exon 24719 24742 . + . ID=Thapsdraft1941.3;Parent=Thapsdraft1941;constitutive=1;rank=3 bd_32x49 . CDS 24823 24846 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=4 bd_32x49 . exon 24823 24846 . + . ID=Thapsdraft1941.4;Parent=Thapsdraft1941;constitutive=1;rank=4 bd_32x49 . CDS 24998 25021 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=5 bd_32x49 . exon 24998 25021 . + . ID=Thapsdraft1941.5;Parent=Thapsdraft1941;constitutive=1;rank=5 bd_32x49 . CDS 25124 25158 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=6 bd_32x49 . exon 25124 25158 . + . ID=Thapsdraft1941.6;Parent=Thapsdraft1941;constitutive=1;ensembl_end_phase=2;rank=6 bd_32x49 . CDS 25267 25291 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=7 bd_32x49 . exon 25267 25291 . + . ID=Thapsdraft1941.7;Parent=Thapsdraft1941;constitutive=1;ensembl_end_phase=1;rank=7 bd_32x49 . CDS 25384 25418 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=8 bd_32x49 . exon 25384 25418 . + . ID=Thapsdraft1941.8;Parent=Thapsdraft1941;constitutive=1;ensembl_end_phase=2;rank=8 bd_32x49 . CDS 25516 25575 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=9 bd_32x49 . exon 25516 25575 . + . ID=Thapsdraft1941.9;Parent=Thapsdraft1941;constitutive=1;rank=9 bd_32x49 . CDS 25647 25824 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=10 bd_32x49 . exon 25647 25824 . + . ID=Thapsdraft1941.10;Parent=Thapsdraft1941;constitutive=1;ensembl_end_phase=1;rank=10 bd_32x49 . CDS 25906 25949 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=11 bd_32x49 . exon 25906 25949 . + . ID=Thapsdraft1941.11;Parent=Thapsdraft1941;constitutive=1;ensembl_end_phase=2;rank=11 bd_32x49 . CDS 26039 26583 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=12 bd_32x49 . exon 26039 26583 . + . ID=Thapsdraft1941.12;Parent=Thapsdraft1941;constitutive=1;ensembl_end_phase=2;rank=12 bd_32x49 . CDS 26665 27164 . + 0 ID=Thapsdraft1941;Parent=Thapsdraft1941;rank=13 bd_32x49 . repeat_region 33479 33677 . - . description=scaffold_33_83_1_268431_270875 bd_32x49 ensembl protein_coding_gene 34370 36492 . - . ID=Thapsdraft1069;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEW8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 34370 36492 . - . ID=Thapsdraft1069;Parent=Thapsdraft1069;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 34370 34400 . - 0 ID=Thapsdraft1069;Parent=Thapsdraft1069;rank=3 bd_32x49 . exon 34370 34400 . - . ID=Thapsdraft1069.3;Parent=Thapsdraft1069;constitutive=1;ensembl_end_phase=1;rank=3 bd_32x49 . CDS 34487 36175 . - 0 ID=Thapsdraft1069;Parent=Thapsdraft1069;rank=2 bd_32x49 . exon 34487 36175 . - . ID=Thapsdraft1069.2;Parent=Thapsdraft1069;constitutive=1;rank=2 bd_32x49 . CDS 36458 36492 . - 0 ID=Thapsdraft1069;Parent=Thapsdraft1069;rank=1 bd_32x49 . exon 26665 27164 . + . ID=Thapsdraft1941.13;Parent=Thapsdraft1941;constitutive=1;ensembl_end_phase=2;rank=13 bd_32x49 ensembl protein_coding_gene 30127 32690 . + . ID=Thapsdraft1944;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEW6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 30127 32690 . + . ID=Thapsdraft1944;Parent=Thapsdraft1944;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 30127 32013 . + 0 ID=Thapsdraft1944;Parent=Thapsdraft1944;rank=1 bd_32x49 . exon 30127 32013 . + . ID=Thapsdraft1944.1;Parent=Thapsdraft1944;constitutive=1;rank=1 bd_32x49 . CDS 32215 32319 . + 0 ID=Thapsdraft1944;Parent=Thapsdraft1944;rank=2 bd_32x49 . exon 32215 32319 . + . ID=Thapsdraft1944.2;Parent=Thapsdraft1944;constitutive=1;rank=2 bd_32x49 . CDS 32571 32690 . + 0 ID=Thapsdraft1944;Parent=Thapsdraft1944;rank=3 bd_32x49 . exon 32571 32690 . + . ID=Thapsdraft1944.3;Parent=Thapsdraft1944;constitutive=1;rank=3 bd_32x49 ensembl protein_coding_gene 33294 34317 . - . ID=Thapsdraft1945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEW7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 33294 34317 . - . ID=Thapsdraft1945;Parent=Thapsdraft1945;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 33294 33890 . - 0 ID=Thapsdraft1945;Parent=Thapsdraft1945;rank=2 bd_32x49 . exon 33294 33890 . - . ID=Thapsdraft1945.2;Parent=Thapsdraft1945;constitutive=1;rank=2 bd_32x49 . CDS 33982 34317 . - 0 ID=Thapsdraft1945;Parent=Thapsdraft1945;rank=1 bd_32x49 . exon 33982 34317 . - . ID=Thapsdraft1945.1;Parent=Thapsdraft1945;constitutive=1;rank=1 bd_32x49 ensembl protein_coding_gene 28139 29574 . - . ID=Thapsdraft2107;biotype=protein_coding;description=ATP GTP binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEX5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 28139 29574 . - . ID=Thapsdraft2107;Parent=Thapsdraft2107;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 28139 28800 . - 0 ID=Thapsdraft2107;Parent=Thapsdraft2107;rank=3 bd_32x49 . exon 28139 28800 . - . ID=Thapsdraft2107.3;Parent=Thapsdraft2107;constitutive=1;ensembl_end_phase=2;rank=3 bd_32x49 . CDS 28852 29076 . - 0 ID=Thapsdraft2107;Parent=Thapsdraft2107;rank=2 bd_32x49 . exon 28852 29076 . - . ID=Thapsdraft2107.2;Parent=Thapsdraft2107;constitutive=1;rank=2 bd_32x49 . CDS 29436 29574 . - 0 ID=Thapsdraft2107;Parent=Thapsdraft2107;rank=1 bd_32x49 . exon 29436 29574 . - . ID=Thapsdraft2107.1;Parent=Thapsdraft2107;constitutive=1;ensembl_end_phase=1;rank=1 bd_32x49 . repeat_region 40721 40784 . ? . description=trf bd_32x49 . repeat_region 41097 42120 . + . description=TE1_TP bd_32x49 . repeat_region 43110 43198 . + . description=MuDR1_TP bd_32x49 . repeat_region 43470 43719 . - . description=TE2c_TP bd_32x49 . repeat_region 43686 43811 . - . description=Harbinger2N_TP bd_32x49 . repeat_region 43803 43923 . ? . description=dust bd_32x49 . repeat_region 43808 43881 . ? . description=trf bd_32x49 . repeat_region 43811 43890 . ? . description=trf bd_32x49 . repeat_region 43815 44188 . - . description=Harbinger2N_TP bd_32x49 . repeat_region 43820 43881 . ? . description=trf bd_32x49 . repeat_region 44189 44306 . + . description=Harbinger4_TP bd_32x49 . exon 36458 36492 . - . ID=Thapsdraft1069.1;Parent=Thapsdraft1069;constitutive=1;ensembl_end_phase=2;rank=1 bd_32x49 ensembl protein_coding_gene 37163 37729 . + . ID=Thapsdraft1946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEW9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 37163 37729 . + . ID=Thapsdraft1946;Parent=Thapsdraft1946;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 37163 37425 . + 0 ID=Thapsdraft1946;Parent=Thapsdraft1946;rank=1 bd_32x49 . exon 37163 37425 . + . ID=Thapsdraft1946.1;Parent=Thapsdraft1946;constitutive=1;ensembl_end_phase=2;rank=1 bd_32x49 . CDS 37570 37729 . + 0 ID=Thapsdraft1946;Parent=Thapsdraft1946;rank=2 bd_32x49 . exon 37570 37729 . + . ID=Thapsdraft1946.2;Parent=Thapsdraft1946;constitutive=1;ensembl_end_phase=1;rank=2 bd_32x49 . repeat_region 53067 53226 . ? . description=dust bd_32x49 . repeat_region 53093 53166 . ? . description=trf bd_32x49 . repeat_region 53096 53175 . ? . description=trf bd_32x49 . repeat_region 53100 53473 . - . description=Harbinger2N_TP bd_32x49 . repeat_region 53105 53166 . ? . description=trf bd_32x49 . repeat_region 53474 53713 . + . description=Harbinger4_TP bd_32x49 . repeat_region 53709 53806 . - . description=TE2c_TP bd_32x49 . repeat_region 60212 60253 . ? . description=dust bd_32x49 . repeat_region 61014 61208 . - . description=TE1_TP bd_32x49 . repeat_region 61597 61648 . ? . description=trf bd_32x49 ensembl protein_coding_gene 54047 56054 . + . ID=Thapsdraft1071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEX0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 54047 56054 . + . ID=Thapsdraft1071;Parent=Thapsdraft1071;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 54047 54525 . + 0 ID=Thapsdraft1071;Parent=Thapsdraft1071;rank=1 bd_32x49 . exon 54047 54525 . + . ID=Thapsdraft1071.1;Parent=Thapsdraft1071;constitutive=1;ensembl_end_phase=2;rank=1 bd_32x49 . CDS 54642 54711 . + 0 ID=Thapsdraft1071;Parent=Thapsdraft1071;rank=2 bd_32x49 . exon 54642 54711 . + . ID=Thapsdraft1071.2;Parent=Thapsdraft1071;constitutive=1;ensembl_end_phase=1;rank=2 bd_32x49 . CDS 54927 56054 . + 0 ID=Thapsdraft1071;Parent=Thapsdraft1071;rank=3 bd_32x49 . exon 54927 56054 . + . ID=Thapsdraft1071.3;Parent=Thapsdraft1071;constitutive=1;rank=3 bd_32x49 ensembl protein_coding_gene 56424 58309 . - . ID=Thapsdraft1455;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEX1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 56424 58309 . - . ID=Thapsdraft1455;Parent=Thapsdraft1455;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 56424 56684 . - 0 ID=Thapsdraft1455;Parent=Thapsdraft1455;rank=5 bd_32x49 . exon 56424 56684 . - . ID=Thapsdraft1455.5;Parent=Thapsdraft1455;constitutive=1;rank=5 bd_32x49 . CDS 56779 57041 . - 0 ID=Thapsdraft1455;Parent=Thapsdraft1455;rank=4 bd_32x49 . exon 56779 57041 . - . ID=Thapsdraft1455.4;Parent=Thapsdraft1455;constitutive=1;ensembl_end_phase=2;rank=4 bd_32x49 . CDS 57132 57586 . - 0 ID=Thapsdraft1455;Parent=Thapsdraft1455;rank=3 bd_32x49 . exon 57132 57586 . - . ID=Thapsdraft1455.3;Parent=Thapsdraft1455;constitutive=1;ensembl_end_phase=2;rank=3 bd_32x49 . CDS 57698 58034 . - 0 ID=Thapsdraft1455;Parent=Thapsdraft1455;rank=2 bd_32x49 . exon 57698 58034 . - . ID=Thapsdraft1455.2;Parent=Thapsdraft1455;constitutive=1;ensembl_end_phase=1;rank=2 bd_32x49 . CDS 58123 58309 . - 0 ID=Thapsdraft1455;Parent=Thapsdraft1455;rank=1 bd_32x49 . exon 58123 58309 . - . ID=Thapsdraft1455.1;Parent=Thapsdraft1455;constitutive=1;ensembl_end_phase=1;rank=1 bd_32x49 ensembl protein_coding_gene 59950 60369 . + . ID=Thapsdraft174;biotype=protein_coding;description=Tim17-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEX2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 59950 60369 . + . ID=Thapsdraft174;Parent=Thapsdraft174;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 59950 60369 . + 0 ID=Thapsdraft174;Parent=Thapsdraft174;rank=1 bd_32x49 . exon 59950 60369 . + . ID=Thapsdraft174.1;Parent=Thapsdraft174;constitutive=1;rank=1 bd_32x49 ensembl protein_coding_gene 61751 62856 . + . ID=Thapsdraft1948;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEX3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 61751 62856 . + . ID=Thapsdraft1948;Parent=Thapsdraft1948;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 61751 62152 . + 0 ID=Thapsdraft1948;Parent=Thapsdraft1948;rank=1 bd_32x49 . exon 61751 62152 . + . ID=Thapsdraft1948.1;Parent=Thapsdraft1948;constitutive=1;rank=1 bd_32x49 . CDS 62297 62646 . + 0 ID=Thapsdraft1948;Parent=Thapsdraft1948;rank=2 bd_32x49 . CDS 62808 62856 . + 0 ID=Thapsdraft1948;Parent=Thapsdraft1948;rank=3 bd_32x49 . repeat_region 65153 65797 . + . description=Gypsy3LTR_TP bd_32x49 . repeat_region 65798 70851 . + . description=Gypsy3I_TP bd_32x49 ensembl protein_coding_gene 63836 64550 . + . ID=Thapsdraft1075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEX4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 63836 64550 . + . ID=Thapsdraft1075;Parent=Thapsdraft1075;biotype=protein_coding;logic_name=jgi_thaps3 bd_32x49 . CDS 63836 63956 . + 0 ID=Thapsdraft1075;Parent=Thapsdraft1075;rank=1 bd_32x49 . exon 63836 63956 . + . ID=Thapsdraft1075.1;Parent=Thapsdraft1075;constitutive=1;ensembl_end_phase=1;rank=1 bd_32x49 . CDS 64064 64177 . + 0 ID=Thapsdraft1075;Parent=Thapsdraft1075;rank=2 bd_32x49 . exon 64064 64177 . + . ID=Thapsdraft1075.2;Parent=Thapsdraft1075;constitutive=1;rank=2 bd_32x49 . CDS 64261 64550 . + 0 ID=Thapsdraft1075;Parent=Thapsdraft1075;rank=3 bd_32x49 . exon 64261 64550 . + . ID=Thapsdraft1075.3;Parent=Thapsdraft1075;constitutive=1;ensembl_end_phase=2;rank=3 bd_32x49 ensembl gene 68647 69227 . + . ID=Thapsdraft1076;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 bd_32x49 ensembl transcript 68647 69227 . + . ID=Thapsdraft1076;Parent=Thapsdraft1076;biotype=nontranslating_CDS;logic_name=jgi_thaps3 bd_32x49 . exon 68647 68844 . + . ID=Thapsdraft1076.1;Parent=Thapsdraft1076;constitutive=1;rank=1 bd_32x49 . exon 68869 69104 . + . ID=Thapsdraft1076.2;Parent=Thapsdraft1076;constitutive=1;ensembl_end_phase=2;rank=2 bd_32x49 . exon 69144 69227 . + . ID=Thapsdraft1076.3;Parent=Thapsdraft1076;constitutive=1;rank=3 bd_32x49 . exon 62297 62646 . + . ID=Thapsdraft1948.2;Parent=Thapsdraft1948;constitutive=1;ensembl_end_phase=2;rank=2 bd_32x49 . exon 62808 62856 . + . ID=Thapsdraft1948.3;Parent=Thapsdraft1948;constitutive=1;ensembl_end_phase=1;rank=3 ##gff-version 3 ##sequence-region bd_6x46 1 79656 bd_6x46 . repeat_region 1253 1291 . ? . description=trf bd_6x46 ensembl protein_coding_gene 2853 4411 . - . ID=Thapsdraft1757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE04];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 2853 4411 . - . ID=Thapsdraft1757;Parent=Thapsdraft1757;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 2853 3294 . - 0 ID=Thapsdraft1757;Parent=Thapsdraft1757;rank=4 bd_6x46 . exon 2853 3294 . - . ID=Thapsdraft1757.4;Parent=Thapsdraft1757;constitutive=1;ensembl_end_phase=1;rank=4 bd_6x46 . CDS 3387 3616 . - 0 ID=Thapsdraft1757;Parent=Thapsdraft1757;rank=3 bd_6x46 . exon 3387 3616 . - . ID=Thapsdraft1757.3;Parent=Thapsdraft1757;constitutive=1;ensembl_end_phase=2;rank=3 bd_6x46 . CDS 3701 4037 . - 0 ID=Thapsdraft1757;Parent=Thapsdraft1757;rank=2 bd_6x46 . exon 3701 4037 . - . ID=Thapsdraft1757.2;Parent=Thapsdraft1757;constitutive=1;ensembl_end_phase=1;rank=2 bd_6x46 . CDS 4128 4411 . - 0 ID=Thapsdraft1757;Parent=Thapsdraft1757;rank=1 bd_6x46 . exon 4128 4411 . - . ID=Thapsdraft1757.1;Parent=Thapsdraft1757;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 ensembl protein_coding_gene 4942 6097 . + . ID=Thapsdraft1758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE05];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 4942 6097 . + . ID=Thapsdraft1758;Parent=Thapsdraft1758;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 4942 4991 . + 0 ID=Thapsdraft1758;Parent=Thapsdraft1758;rank=1 bd_6x46 . exon 4942 4991 . + . ID=Thapsdraft1758.1;Parent=Thapsdraft1758;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 . CDS 5154 5359 . + 0 ID=Thapsdraft1758;Parent=Thapsdraft1758;rank=2 bd_6x46 . exon 5154 5359 . + . ID=Thapsdraft1758.2;Parent=Thapsdraft1758;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . CDS 5667 6097 . + 0 ID=Thapsdraft1758;Parent=Thapsdraft1758;rank=3 bd_6x46 . exon 5667 6097 . + . ID=Thapsdraft1758.3;Parent=Thapsdraft1758;constitutive=1;ensembl_end_phase=2;rank=3 bd_6x46 ensembl protein_coding_gene 9511 11018 . + . ID=Thapsdraft1760;biotype=protein_coding;description=ACYL-COA dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8LE08];external_name=ACD2;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 9511 11018 . + . ID=Thapsdraft1760;Parent=Thapsdraft1760;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 9511 9581 . + 0 ID=Thapsdraft1760;Parent=Thapsdraft1760;rank=1 bd_6x46 . exon 9511 9581 . + . ID=Thapsdraft1760.1;Parent=Thapsdraft1760;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 . CDS 9647 10281 . + 0 ID=Thapsdraft1760;Parent=Thapsdraft1760;rank=2 bd_6x46 . exon 9647 10281 . + . ID=Thapsdraft1760.2;Parent=Thapsdraft1760;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . CDS 10396 10416 . + 0 ID=Thapsdraft1760;Parent=Thapsdraft1760;rank=3 bd_6x46 . CDS 10510 10763 . + 0 ID=Thapsdraft1760;Parent=Thapsdraft1760;rank=4 bd_6x46 . CDS 10857 11018 . + 0 ID=Thapsdraft1760;Parent=Thapsdraft1760;rank=5 bd_6x46 ensembl protein_coding_gene 6 445 . - . ID=Thapsdraft650;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE02];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 6 445 . - . ID=Thapsdraft650;Parent=Thapsdraft650;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 6 33 . - 0 ID=Thapsdraft650;Parent=Thapsdraft650;rank=2 bd_6x46 . exon 6 33 . - . ID=Thapsdraft650.2;Parent=Thapsdraft650;constitutive=1;ensembl_end_phase=1;rank=2 bd_6x46 . CDS 105 445 . - 0 ID=Thapsdraft650;Parent=Thapsdraft650;rank=1 bd_6x46 . exon 105 445 . - . ID=Thapsdraft650.1;Parent=Thapsdraft650;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 ensembl protein_coding_gene 1388 2644 . + . ID=Thapsdraft651;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE03];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 1388 2644 . + . ID=Thapsdraft651;Parent=Thapsdraft651;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 1388 2644 . + 0 ID=Thapsdraft651;Parent=Thapsdraft651;rank=1 bd_6x46 . exon 1388 2644 . + . ID=Thapsdraft651.1;Parent=Thapsdraft651;constitutive=1;rank=1 bd_6x46 ensembl protein_coding_gene 6204 8024 . - . ID=Thapsdraft654;biotype=protein_coding;description=Sec1-family transport protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE06];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 6204 8024 . - . ID=Thapsdraft654;Parent=Thapsdraft654;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 6204 6427 . - 0 ID=Thapsdraft654;Parent=Thapsdraft654;rank=5 bd_6x46 . exon 6204 6427 . - . ID=Thapsdraft654.5;Parent=Thapsdraft654;constitutive=1;ensembl_end_phase=2;rank=5 bd_6x46 . CDS 6509 7283 . - 0 ID=Thapsdraft654;Parent=Thapsdraft654;rank=4 bd_6x46 . exon 6509 7283 . - . ID=Thapsdraft654.4;Parent=Thapsdraft654;constitutive=1;ensembl_end_phase=1;rank=4 bd_6x46 . CDS 7329 7465 . - 0 ID=Thapsdraft654;Parent=Thapsdraft654;rank=3 bd_6x46 . exon 7329 7465 . - . ID=Thapsdraft654.3;Parent=Thapsdraft654;constitutive=1;ensembl_end_phase=2;rank=3 bd_6x46 . CDS 7661 7786 . - 0 ID=Thapsdraft654;Parent=Thapsdraft654;rank=2 bd_6x46 . exon 7661 7786 . - . ID=Thapsdraft654.2;Parent=Thapsdraft654;constitutive=1;rank=2 bd_6x46 . CDS 7916 8024 . - 0 ID=Thapsdraft654;Parent=Thapsdraft654;rank=1 bd_6x46 . exon 7916 8024 . - . ID=Thapsdraft654.1;Parent=Thapsdraft654;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 ensembl protein_coding_gene 8486 9088 . - . ID=Thapsdraft655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE07];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 8486 9088 . - . ID=Thapsdraft655;Parent=Thapsdraft655;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 8486 9088 . - 0 ID=Thapsdraft655;Parent=Thapsdraft655;rank=1 bd_6x46 . exon 8486 9088 . - . ID=Thapsdraft655.1;Parent=Thapsdraft655;constitutive=1;rank=1 bd_6x46 . repeat_region 10280 10332 . ? . description=dust bd_6x46 . repeat_region 17900 17923 . ? . description=dust bd_6x46 . exon 10396 10416 . + . ID=Thapsdraft1760.3;Parent=Thapsdraft1760;constitutive=1;rank=3 bd_6x46 . exon 10510 10763 . + . ID=Thapsdraft1760.4;Parent=Thapsdraft1760;constitutive=1;ensembl_end_phase=2;rank=4 bd_6x46 . exon 10857 11018 . + . ID=Thapsdraft1760.5;Parent=Thapsdraft1760;constitutive=1;rank=5 bd_6x46 ensembl protein_coding_gene 11283 13618 . + . ID=Thapsdraft1762;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE09];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 11283 13618 . + . ID=Thapsdraft1762;Parent=Thapsdraft1762;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 11283 11739 . + 0 ID=Thapsdraft1762;Parent=Thapsdraft1762;rank=1 bd_6x46 . exon 11283 11739 . + . ID=Thapsdraft1762.1;Parent=Thapsdraft1762;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 . CDS 12028 12317 . + 0 ID=Thapsdraft1762;Parent=Thapsdraft1762;rank=2 bd_6x46 . exon 12028 12317 . + . ID=Thapsdraft1762.2;Parent=Thapsdraft1762;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . CDS 12731 13618 . + 0 ID=Thapsdraft1762;Parent=Thapsdraft1762;rank=3 bd_6x46 . exon 12731 13618 . + . ID=Thapsdraft1762.3;Parent=Thapsdraft1762;constitutive=1;rank=3 bd_6x46 ensembl protein_coding_gene 17585 19150 . + . ID=Thapsdraft1763;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE12];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 17585 19150 . + . ID=Thapsdraft1763;Parent=Thapsdraft1763;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 17585 18376 . + 0 ID=Thapsdraft1763;Parent=Thapsdraft1763;rank=1 bd_6x46 . exon 17585 18376 . + . ID=Thapsdraft1763.1;Parent=Thapsdraft1763;constitutive=1;rank=1 bd_6x46 . CDS 18476 18620 . + 0 ID=Thapsdraft1763;Parent=Thapsdraft1763;rank=2 bd_6x46 . exon 18476 18620 . + . ID=Thapsdraft1763.2;Parent=Thapsdraft1763;constitutive=1;ensembl_end_phase=1;rank=2 bd_6x46 . CDS 18684 19150 . + 0 ID=Thapsdraft1763;Parent=Thapsdraft1763;rank=3 bd_6x46 . exon 18684 19150 . + . ID=Thapsdraft1763.3;Parent=Thapsdraft1763;constitutive=1;ensembl_end_phase=2;rank=3 bd_6x46 ensembl protein_coding_gene 13800 16366 . - . ID=Thapsdraft392;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE10];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 13800 16366 . - . ID=Thapsdraft392;Parent=Thapsdraft392;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 13800 13872 . - 0 ID=Thapsdraft392;Parent=Thapsdraft392;rank=3 bd_6x46 . exon 13800 13872 . - . ID=Thapsdraft392.3;Parent=Thapsdraft392;constitutive=1;ensembl_end_phase=1;rank=3 bd_6x46 . CDS 13903 14931 . - 0 ID=Thapsdraft392;Parent=Thapsdraft392;rank=2 bd_6x46 . exon 13903 14931 . - . ID=Thapsdraft392.2;Parent=Thapsdraft392;constitutive=1;rank=2 bd_6x46 . CDS 14986 16366 . - 0 ID=Thapsdraft392;Parent=Thapsdraft392;rank=1 bd_6x46 . exon 14986 16366 . - . ID=Thapsdraft392.1;Parent=Thapsdraft392;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 ensembl protein_coding_gene 16484 17209 . - . ID=Thapsdraft661;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE11];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 16484 17209 . - . ID=Thapsdraft661;Parent=Thapsdraft661;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 16484 17209 . - 0 ID=Thapsdraft661;Parent=Thapsdraft661;rank=1 bd_6x46 . exon 16484 17209 . - . ID=Thapsdraft661.1;Parent=Thapsdraft661;constitutive=1;rank=1 bd_6x46 ensembl protein_coding_gene 19494 20375 . - . ID=Thapsdraft663;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE13];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 19494 20375 . - . ID=Thapsdraft663;Parent=Thapsdraft663;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 19494 20375 . - 0 ID=Thapsdraft663;Parent=Thapsdraft663;rank=1 bd_6x46 . exon 19494 20375 . - . ID=Thapsdraft663.1;Parent=Thapsdraft663;constitutive=1;rank=1 bd_6x46 ensembl protein_coding_gene 27086 27979 . - . ID=Thapsdraft1765;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE17];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 27086 27979 . - . ID=Thapsdraft1765;Parent=Thapsdraft1765;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 27086 27979 . - 0 ID=Thapsdraft1765;Parent=Thapsdraft1765;rank=1 bd_6x46 . exon 27086 27979 . - . ID=Thapsdraft1765.1;Parent=Thapsdraft1765;constitutive=1;rank=1 bd_6x46 ensembl protein_coding_gene 28523 31718 . - . ID=Thapsdraft1766;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE18];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 28523 31718 . - . ID=Thapsdraft1766;Parent=Thapsdraft1766;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 28523 28798 . - 0 ID=Thapsdraft1766;Parent=Thapsdraft1766;rank=3 bd_6x46 . exon 28523 28798 . - . ID=Thapsdraft1766.3;Parent=Thapsdraft1766;constitutive=1;rank=3 bd_6x46 . CDS 30201 30637 . - 0 ID=Thapsdraft1766;Parent=Thapsdraft1766;rank=2 bd_6x46 . CDS 31199 31718 . - 0 ID=Thapsdraft1766;Parent=Thapsdraft1766;rank=1 bd_6x46 ensembl protein_coding_gene 20908 22026 . + . ID=Thapsdraft393;biotype=protein_coding;description=Udp-galactose transporter-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE14];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 20908 22026 . + . ID=Thapsdraft393;Parent=Thapsdraft393;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 20908 21062 . + 0 ID=Thapsdraft393;Parent=Thapsdraft393;rank=1 bd_6x46 . exon 20908 21062 . + . ID=Thapsdraft393.1;Parent=Thapsdraft393;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 . CDS 21228 21628 . + 0 ID=Thapsdraft393;Parent=Thapsdraft393;rank=2 bd_6x46 . exon 21228 21628 . + . ID=Thapsdraft393.2;Parent=Thapsdraft393;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . CDS 21644 22026 . + 0 ID=Thapsdraft393;Parent=Thapsdraft393;rank=3 bd_6x46 . exon 21644 22026 . + . ID=Thapsdraft393.3;Parent=Thapsdraft393;constitutive=1;ensembl_end_phase=2;rank=3 bd_6x46 ensembl protein_coding_gene 22333 24815 . - . ID=Thapsdraft529;biotype=protein_coding;description=Helicase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE15];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 22333 24815 . - . ID=Thapsdraft529;Parent=Thapsdraft529;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 22333 22588 . - 0 ID=Thapsdraft529;Parent=Thapsdraft529;rank=8 bd_6x46 . exon 22333 22588 . - . ID=Thapsdraft529.8;Parent=Thapsdraft529;constitutive=1;ensembl_end_phase=1;rank=8 bd_6x46 . CDS 22682 22792 . - 0 ID=Thapsdraft529;Parent=Thapsdraft529;rank=7 bd_6x46 . exon 22682 22792 . - . ID=Thapsdraft529.7;Parent=Thapsdraft529;constitutive=1;rank=7 bd_6x46 . CDS 22880 23499 . - 0 ID=Thapsdraft529;Parent=Thapsdraft529;rank=6 bd_6x46 . exon 22880 23499 . - . ID=Thapsdraft529.6;Parent=Thapsdraft529;constitutive=1;ensembl_end_phase=2;rank=6 bd_6x46 . CDS 23596 23943 . - 0 ID=Thapsdraft529;Parent=Thapsdraft529;rank=5 bd_6x46 . exon 23596 23943 . - . ID=Thapsdraft529.5;Parent=Thapsdraft529;constitutive=1;rank=5 bd_6x46 . CDS 24027 24087 . - 0 ID=Thapsdraft529;Parent=Thapsdraft529;rank=4 bd_6x46 . exon 24027 24087 . - . ID=Thapsdraft529.4;Parent=Thapsdraft529;constitutive=1;ensembl_end_phase=1;rank=4 bd_6x46 . CDS 24171 24426 . - 0 ID=Thapsdraft529;Parent=Thapsdraft529;rank=3 bd_6x46 . exon 24171 24426 . - . ID=Thapsdraft529.3;Parent=Thapsdraft529;constitutive=1;ensembl_end_phase=1;rank=3 bd_6x46 . CDS 24644 24705 . - 0 ID=Thapsdraft529;Parent=Thapsdraft529;rank=2 bd_6x46 . exon 24644 24705 . - . ID=Thapsdraft529.2;Parent=Thapsdraft529;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . CDS 24751 24815 . - 0 ID=Thapsdraft529;Parent=Thapsdraft529;rank=1 bd_6x46 . exon 24751 24815 . - . ID=Thapsdraft529.1;Parent=Thapsdraft529;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 ensembl protein_coding_gene 24971 26392 . - . ID=Thapsdraft668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE16];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 24971 26392 . - . ID=Thapsdraft668;Parent=Thapsdraft668;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 24971 25381 . - 0 ID=Thapsdraft668;Parent=Thapsdraft668;rank=3 bd_6x46 . exon 24971 25381 . - . ID=Thapsdraft668.3;Parent=Thapsdraft668;constitutive=1;rank=3 bd_6x46 . CDS 25446 25634 . - 0 ID=Thapsdraft668;Parent=Thapsdraft668;rank=2 bd_6x46 . exon 25446 25634 . - . ID=Thapsdraft668.2;Parent=Thapsdraft668;constitutive=1;rank=2 bd_6x46 . CDS 25732 26392 . - 0 ID=Thapsdraft668;Parent=Thapsdraft668;rank=1 bd_6x46 . exon 25732 26392 . - . ID=Thapsdraft668.1;Parent=Thapsdraft668;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 . repeat_region 34777 34798 . ? . description=dust bd_6x46 . repeat_region 36833 36853 . ? . description=trf bd_6x46 ensembl protein_coding_gene 35043 36155 . - . ID=Thapsdraft1487;biotype=protein_coding;description=Pyrroline-5-carboxylate reductase [Source:UniProtKB/TrEMBL%3BAcc:B8LE21];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 35043 36155 . - . ID=Thapsdraft1487;Parent=Thapsdraft1487;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 35043 35470 . - 0 ID=Thapsdraft1487;Parent=Thapsdraft1487;rank=2 bd_6x46 . exon 35043 35470 . - . ID=Thapsdraft1487.2;Parent=Thapsdraft1487;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . CDS 35615 36155 . - 0 ID=Thapsdraft1487;Parent=Thapsdraft1487;rank=1 bd_6x46 . exon 35615 36155 . - . ID=Thapsdraft1487.1;Parent=Thapsdraft1487;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 . exon 30201 30637 . - . ID=Thapsdraft1766.2;Parent=Thapsdraft1766;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . exon 31199 31718 . - . ID=Thapsdraft1766.1;Parent=Thapsdraft1766;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 ensembl protein_coding_gene 36578 36959 . + . ID=Thapsdraft298;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE22];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 36578 36959 . + . ID=Thapsdraft298;Parent=Thapsdraft298;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 36578 36680 . + 0 ID=Thapsdraft298;Parent=Thapsdraft298;rank=1 bd_6x46 . exon 36578 36680 . + . ID=Thapsdraft298.1;Parent=Thapsdraft298;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 . CDS 36862 36959 . + 0 ID=Thapsdraft298;Parent=Thapsdraft298;rank=2 bd_6x46 . exon 36862 36959 . + . ID=Thapsdraft298.2;Parent=Thapsdraft298;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 ensembl protein_coding_gene 33406 34206 . - . ID=Thapsdraft396;biotype=protein_coding;description=Mucin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE20];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 33406 34206 . - . ID=Thapsdraft396;Parent=Thapsdraft396;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 33406 33514 . - 0 ID=Thapsdraft396;Parent=Thapsdraft396;rank=2 bd_6x46 . exon 33406 33514 . - . ID=Thapsdraft396.2;Parent=Thapsdraft396;constitutive=1;ensembl_end_phase=1;rank=2 bd_6x46 . CDS 33968 34206 . - 0 ID=Thapsdraft396;Parent=Thapsdraft396;rank=1 bd_6x46 . exon 33968 34206 . - . ID=Thapsdraft396.1;Parent=Thapsdraft396;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 ensembl protein_coding_gene 32086 33018 . - . ID=Thapsdraft672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE19];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 32086 33018 . - . ID=Thapsdraft672;Parent=Thapsdraft672;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 32086 33018 . - 0 ID=Thapsdraft672;Parent=Thapsdraft672;rank=1 bd_6x46 . exon 32086 33018 . - . ID=Thapsdraft672.1;Parent=Thapsdraft672;constitutive=1;rank=1 bd_6x46 ensembl protein_coding_gene 39994 44179 . - . ID=Thapsdraft1770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE23];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 39994 44179 . - . ID=Thapsdraft1770;Parent=Thapsdraft1770;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 39994 40501 . - 0 ID=Thapsdraft1770;Parent=Thapsdraft1770;rank=3 bd_6x46 . exon 39994 40501 . - . ID=Thapsdraft1770.3;Parent=Thapsdraft1770;constitutive=1;ensembl_end_phase=1;rank=3 bd_6x46 . CDS 40559 41591 . - 0 ID=Thapsdraft1770;Parent=Thapsdraft1770;rank=2 bd_6x46 . exon 40559 41591 . - . ID=Thapsdraft1770.2;Parent=Thapsdraft1770;constitutive=1;ensembl_end_phase=1;rank=2 bd_6x46 . CDS 41674 44179 . - 0 ID=Thapsdraft1770;Parent=Thapsdraft1770;rank=1 bd_6x46 . exon 41674 44179 . - . ID=Thapsdraft1770.1;Parent=Thapsdraft1770;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 ensembl protein_coding_gene 45032 49007 . + . ID=Thapsdraft1771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE24];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 45032 49007 . + . ID=Thapsdraft1771;Parent=Thapsdraft1771;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 45032 45743 . + 0 ID=Thapsdraft1771;Parent=Thapsdraft1771;rank=1 bd_6x46 . exon 45032 45743 . + . ID=Thapsdraft1771.1;Parent=Thapsdraft1771;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 . CDS 45857 47529 . + 0 ID=Thapsdraft1771;Parent=Thapsdraft1771;rank=2 bd_6x46 . exon 45857 47529 . + . ID=Thapsdraft1771.2;Parent=Thapsdraft1771;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . CDS 47615 48176 . + 0 ID=Thapsdraft1771;Parent=Thapsdraft1771;rank=3 bd_6x46 . exon 47615 48176 . + . ID=Thapsdraft1771.3;Parent=Thapsdraft1771;constitutive=1;ensembl_end_phase=1;rank=3 bd_6x46 . CDS 48274 49007 . + 0 ID=Thapsdraft1771;Parent=Thapsdraft1771;rank=4 bd_6x46 . exon 48274 49007 . + . ID=Thapsdraft1771.4;Parent=Thapsdraft1771;constitutive=1;ensembl_end_phase=2;rank=4 bd_6x46 ensembl protein_coding_gene 49103 50272 . - . ID=Thapsdraft682;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE25];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 49103 50272 . - . ID=Thapsdraft682;Parent=Thapsdraft682;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 49103 50272 . - 0 ID=Thapsdraft682;Parent=Thapsdraft682;rank=1 bd_6x46 . exon 49103 50272 . - . ID=Thapsdraft682.1;Parent=Thapsdraft682;constitutive=1;rank=1 bd_6x46 . repeat_region 55434 55473 . ? . description=dust bd_6x46 . repeat_region 55578 55605 . ? . description=trf bd_6x46 . repeat_region 55734 55754 . ? . description=dust bd_6x46 . repeat_region 59746 60380 . - . description=Gypsy3LTR_TP bd_6x46 ensembl protein_coding_gene 54737 55230 . - . ID=Thapsdraft1772;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE27];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 54737 55230 . - . ID=Thapsdraft1772;Parent=Thapsdraft1772;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 54737 54838 . - 0 ID=Thapsdraft1772;Parent=Thapsdraft1772;rank=2 bd_6x46 . exon 54737 54838 . - . ID=Thapsdraft1772.2;Parent=Thapsdraft1772;constitutive=1;rank=2 bd_6x46 . CDS 55039 55230 . - 0 ID=Thapsdraft1772;Parent=Thapsdraft1772;rank=1 bd_6x46 . exon 55039 55230 . - . ID=Thapsdraft1772.1;Parent=Thapsdraft1772;constitutive=1;rank=1 bd_6x46 ensembl protein_coding_gene 50926 53208 . - . ID=Thapsdraft683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE26];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 50926 53208 . - . ID=Thapsdraft683;Parent=Thapsdraft683;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 50926 51971 . - 0 ID=Thapsdraft683;Parent=Thapsdraft683;rank=2 bd_6x46 . exon 50926 51971 . - . ID=Thapsdraft683.2;Parent=Thapsdraft683;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . CDS 52341 53208 . - 0 ID=Thapsdraft683;Parent=Thapsdraft683;rank=1 bd_6x46 . exon 52341 53208 . - . ID=Thapsdraft683.1;Parent=Thapsdraft683;constitutive=1;ensembl_end_phase=1;rank=1 bd_6x46 ensembl protein_coding_gene 57250 58811 . + . ID=Thapsdraft686;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE28];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 57250 58811 . + . ID=Thapsdraft686;Parent=Thapsdraft686;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 57250 57323 . + 0 ID=Thapsdraft686;Parent=Thapsdraft686;rank=1 bd_6x46 . exon 57250 57323 . + . ID=Thapsdraft686.1;Parent=Thapsdraft686;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 . CDS 57405 57513 . + 0 ID=Thapsdraft686;Parent=Thapsdraft686;rank=2 bd_6x46 . exon 57405 57513 . + . ID=Thapsdraft686.2;Parent=Thapsdraft686;constitutive=1;ensembl_end_phase=1;rank=2 bd_6x46 . CDS 57601 57752 . + 0 ID=Thapsdraft686;Parent=Thapsdraft686;rank=3 bd_6x46 . exon 57601 57752 . + . ID=Thapsdraft686.3;Parent=Thapsdraft686;constitutive=1;ensembl_end_phase=2;rank=3 bd_6x46 . CDS 57825 57942 . + 0 ID=Thapsdraft686;Parent=Thapsdraft686;rank=4 bd_6x46 . exon 57825 57942 . + . ID=Thapsdraft686.4;Parent=Thapsdraft686;constitutive=1;ensembl_end_phase=1;rank=4 bd_6x46 . CDS 57982 58253 . + 0 ID=Thapsdraft686;Parent=Thapsdraft686;rank=5 bd_6x46 . exon 57982 58253 . + . ID=Thapsdraft686.5;Parent=Thapsdraft686;constitutive=1;ensembl_end_phase=2;rank=5 bd_6x46 . CDS 58293 58600 . + 0 ID=Thapsdraft686;Parent=Thapsdraft686;rank=6 bd_6x46 . exon 58293 58600 . + . ID=Thapsdraft686.6;Parent=Thapsdraft686;constitutive=1;ensembl_end_phase=2;rank=6 bd_6x46 . CDS 58634 58811 . + 0 ID=Thapsdraft686;Parent=Thapsdraft686;rank=7 bd_6x46 . exon 58634 58811 . + . ID=Thapsdraft686.7;Parent=Thapsdraft686;constitutive=1;ensembl_end_phase=1;rank=7 bd_6x46 ensembl protein_coding_gene 62710 64757 . - . ID=Thapsdraft1133;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LCY1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 62710 64757 . - . ID=Thapsdraft1133;Parent=Thapsdraft1133;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 62710 63032 . - 0 ID=Thapsdraft1133;Parent=Thapsdraft1133;rank=3 bd_6x46 . exon 62710 63032 . - . ID=Thapsdraft1133.3;Parent=Thapsdraft1133;constitutive=1;ensembl_end_phase=2;rank=3 bd_6x46 . CDS 63146 64301 . - 0 ID=Thapsdraft1133;Parent=Thapsdraft1133;rank=2 bd_6x46 . exon 63146 64301 . - . ID=Thapsdraft1133.2;Parent=Thapsdraft1133;constitutive=1;ensembl_end_phase=1;rank=2 bd_6x46 . CDS 64380 64757 . - 0 ID=Thapsdraft1133;Parent=Thapsdraft1133;rank=1 bd_6x46 . exon 64380 64757 . - . ID=Thapsdraft1133.1;Parent=Thapsdraft1133;constitutive=1;rank=1 bd_6x46 ensembl protein_coding_gene 61358 62531 . + . ID=Thapsdraft687;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE29];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 61358 62531 . + . ID=Thapsdraft687;Parent=Thapsdraft687;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 61358 61926 . + 0 ID=Thapsdraft687;Parent=Thapsdraft687;rank=1 bd_6x46 . exon 61358 61926 . + . ID=Thapsdraft687.1;Parent=Thapsdraft687;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 . CDS 61967 62531 . + 0 ID=Thapsdraft687;Parent=Thapsdraft687;rank=2 bd_6x46 . exon 61967 62531 . + . ID=Thapsdraft687.2;Parent=Thapsdraft687;constitutive=1;ensembl_end_phase=1;rank=2 bd_6x46 ensembl protein_coding_gene 65515 69185 . + . ID=Thapsdraft690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE31];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 65515 69185 . + . ID=Thapsdraft690;Parent=Thapsdraft690;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 65515 67277 . + 0 ID=Thapsdraft690;Parent=Thapsdraft690;rank=1 bd_6x46 . exon 65515 67277 . + . ID=Thapsdraft690.1;Parent=Thapsdraft690;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 . CDS 67525 67667 . + 0 ID=Thapsdraft690;Parent=Thapsdraft690;rank=2 bd_6x46 . exon 67525 67667 . + . ID=Thapsdraft690.2;Parent=Thapsdraft690;constitutive=1;ensembl_end_phase=2;rank=2 bd_6x46 . CDS 67777 69185 . + 0 ID=Thapsdraft690;Parent=Thapsdraft690;rank=3 bd_6x46 . exon 67777 69185 . + . ID=Thapsdraft690.3;Parent=Thapsdraft690;constitutive=1;ensembl_end_phase=2;rank=3 bd_6x46 . repeat_region 72463 72482 . ? . description=trf bd_6x46 . repeat_region 72463 72482 . ? . description=dust bd_6x46 . repeat_region 72683 72693 . ? . description=dust bd_6x46 . repeat_region 73627 73641 . ? . description=dust bd_6x46 . repeat_region 76866 76886 . ? . description=trf bd_6x46 . repeat_region 76907 76925 . ? . description=dust bd_6x46 ensembl protein_coding_gene 78675 79619 . + . ID=Thapsdraft1150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE36];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 78675 79619 . + . ID=Thapsdraft1150;Parent=Thapsdraft1150;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 78675 79619 . + 0 ID=Thapsdraft1150;Parent=Thapsdraft1150;rank=1 bd_6x46 . exon 78675 79619 . + . ID=Thapsdraft1150.1;Parent=Thapsdraft1150;constitutive=1;rank=1 bd_6x46 ensembl protein_coding_gene 70506 71096 . + . ID=Thapsdraft176;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE32];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 70506 71096 . + . ID=Thapsdraft176;Parent=Thapsdraft176;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 70506 70804 . + 0 ID=Thapsdraft176;Parent=Thapsdraft176;rank=1 bd_6x46 . exon 70506 70804 . + . ID=Thapsdraft176.1;Parent=Thapsdraft176;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 . CDS 70850 71096 . + 0 ID=Thapsdraft176;Parent=Thapsdraft176;rank=2 bd_6x46 . exon 70850 71096 . + . ID=Thapsdraft176.2;Parent=Thapsdraft176;constitutive=1;ensembl_end_phase=1;rank=2 bd_6x46 ensembl protein_coding_gene 73728 76268 . + . ID=Thapsdraft692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE33];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 73728 76268 . + . ID=Thapsdraft692;Parent=Thapsdraft692;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 73728 76268 . + 0 ID=Thapsdraft692;Parent=Thapsdraft692;rank=1 bd_6x46 . exon 73728 76268 . + . ID=Thapsdraft692.1;Parent=Thapsdraft692;constitutive=1;rank=1 bd_6x46 ensembl protein_coding_gene 77102 77464 . + . ID=Thapsdraft693;biotype=protein_coding;description=Putative uncharacterized protein HSF41 [Source:UniProtKB/TrEMBL%3BAcc:B8BWH9];external_name=HSF41;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 77102 77464 . + . ID=Thapsdraft693;Parent=Thapsdraft693;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 77102 77292 . + 0 ID=Thapsdraft693;Parent=Thapsdraft693;rank=1 bd_6x46 . exon 77102 77292 . + . ID=Thapsdraft693.1;Parent=Thapsdraft693;constitutive=1;ensembl_end_phase=2;rank=1 bd_6x46 . CDS 77372 77464 . + 0 ID=Thapsdraft693;Parent=Thapsdraft693;rank=2 bd_6x46 . exon 77372 77464 . + . ID=Thapsdraft693.2;Parent=Thapsdraft693;constitutive=1;rank=2 bd_6x46 ensembl protein_coding_gene 77652 78107 . + . ID=Thapsdraft694;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWH8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_6x46 ensembl transcript 77652 78107 . + . ID=Thapsdraft694;Parent=Thapsdraft694;biotype=protein_coding;logic_name=jgi_thaps3 bd_6x46 . CDS 77652 78107 . + 0 ID=Thapsdraft694;Parent=Thapsdraft694;rank=1 bd_6x46 . exon 77652 78107 . + . ID=Thapsdraft694.1;Parent=Thapsdraft694;constitutive=1;rank=1 ##gff-version 3 ##sequence-region 11b 1 82843 chr11b . repeat_region 1540 1834 . + . description=Copia2LTR_TP chr11b . repeat_region 1835 5335 . + . description=Copia2I_TP chr11b . repeat_region 5336 5630 . + . description=Copia2LTR_TP chr11b . repeat_region 8012 8636 . + . description=Copia9I_TP chr11b . repeat_region 8749 8791 . ? . description=trf chr11b . repeat_region 9058 10042 . + . description=Copia9I_TP chr11b ensembl protein_coding_gene 2579 2859 . + . ID=Thaps263838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC83];external_name=Thaps263838;logic_name=jgi_thaps3 chr11b ensembl transcript 2579 2859 . + . ID=Thaps263838;Parent=Thaps263838;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 2579 2859 . + 0 ID=Thaps263838;Parent=Thaps263838;rank=1 chr11b . exon 2579 2859 . + . ID=Thaps263838.1;Parent=Thaps263838;constitutive=1;ensembl_end_phase=2;rank=1 chr11b ensembl protein_coding_gene 5608 7594 . - . ID=Thaps263840;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC84];external_name=Thaps263840;logic_name=jgi_thaps3 chr11b ensembl transcript 5608 7594 . - . ID=Thaps263840;Parent=Thaps263840;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 5608 7594 . - 0 ID=Thaps263840;Parent=Thaps263840;rank=1 chr11b . exon 5608 7594 . - . ID=Thaps263840.1;Parent=Thaps263840;constitutive=1;ensembl_end_phase=1;rank=1 chr11b ensembl protein_coding_gene 57 926 . - . ID=Thaps8892;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC82];external_name=Thaps8892;logic_name=jgi_thaps3 chr11b ensembl transcript 57 926 . - . ID=Thaps8892;Parent=Thaps8892;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 57 794 . - 0 ID=Thaps8892;Parent=Thaps8892;rank=2 chr11b . exon 57 794 . - . ID=Thaps8892.2;Parent=Thaps8892;constitutive=1;rank=2 chr11b . CDS 861 926 . - 0 ID=Thaps8892;Parent=Thaps8892;rank=1 chr11b . exon 861 926 . - . ID=Thaps8892.1;Parent=Thaps8892;constitutive=1;rank=1 chr11b . repeat_region 11710 11717 . ? . description=dust chr11b ensembl protein_coding_gene 12507 13477 . - . ID=Thaps8894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC85];external_name=Thaps8894;logic_name=jgi_thaps3 chr11b ensembl transcript 12507 13477 . - . ID=Thaps8894;Parent=Thaps8894;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 12507 13392 . - 0 ID=Thaps8894;Parent=Thaps8894;rank=2 chr11b . exon 12507 13392 . - . ID=Thaps8894.2;Parent=Thaps8894;constitutive=1;ensembl_end_phase=1;rank=2 chr11b . CDS 13413 13477 . - 0 ID=Thaps8894;Parent=Thaps8894;rank=1 chr11b . exon 13413 13477 . - . ID=Thaps8894.1;Parent=Thaps8894;constitutive=1;ensembl_end_phase=2;rank=1 chr11b ensembl protein_coding_gene 14191 14871 . + . ID=Thaps8895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC86];external_name=Thaps8895;logic_name=jgi_thaps3 chr11b ensembl transcript 14191 14871 . + . ID=Thaps8895;Parent=Thaps8895;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 14191 14871 . + 0 ID=Thaps8895;Parent=Thaps8895;rank=1 chr11b . exon 14191 14871 . + . ID=Thaps8895.1;Parent=Thaps8895;constitutive=1;rank=1 chr11b ensembl protein_coding_gene 15292 15861 . + . ID=Thaps8896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC87];external_name=Thaps8896;logic_name=jgi_thaps3 chr11b ensembl transcript 15292 15861 . + . ID=Thaps8896;Parent=Thaps8896;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 15292 15383 . + 0 ID=Thaps8896;Parent=Thaps8896;rank=1 chr11b . exon 15292 15383 . + . ID=Thaps8896.1;Parent=Thaps8896;constitutive=1;ensembl_end_phase=2;rank=1 chr11b . CDS 15489 15861 . + 0 ID=Thaps8896;Parent=Thaps8896;rank=2 chr11b . exon 15489 15861 . + . ID=Thaps8896.2;Parent=Thaps8896;constitutive=1;ensembl_end_phase=1;rank=2 chr11b ensembl protein_coding_gene 16070 16591 . - . ID=Thaps8897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC88];external_name=Thaps8897;logic_name=jgi_thaps3 chr11b ensembl transcript 16070 16591 . - . ID=Thaps8897;Parent=Thaps8897;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 16070 16591 . - 0 ID=Thaps8897;Parent=Thaps8897;rank=1 chr11b . exon 16070 16591 . - . ID=Thaps8897.1;Parent=Thaps8897;constitutive=1;rank=1 chr11b ensembl protein_coding_gene 17452 18144 . + . ID=Thaps8898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC89];external_name=Thaps8898;logic_name=jgi_thaps3 chr11b ensembl transcript 17452 18144 . + . ID=Thaps8898;Parent=Thaps8898;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 17452 18144 . + 0 ID=Thaps8898;Parent=Thaps8898;rank=1 chr11b . exon 17452 18144 . + . ID=Thaps8898.1;Parent=Thaps8898;constitutive=1;rank=1 chr11b . repeat_region 21248 21273 . ? . description=trf chr11b . repeat_region 22583 22639 . ? . description=trf chr11b . repeat_region 22585 22654 . ? . description=trf chr11b ensembl protein_coding_gene 19098 21110 . + . ID=Thaps24399;biotype=protein_coding;description=Putative uncharacterized protein DLDH2 [Source:UniProtKB/TrEMBL%3BAcc:B8LC90];external_name=DLDH2;logic_name=jgi_thaps3 chr11b ensembl transcript 19098 21110 . + . ID=Thaps24399;Parent=Thaps24399;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 19098 19634 . + 0 ID=Thaps24399;Parent=Thaps24399;rank=1 chr11b . exon 19098 19634 . + . ID=Thaps24399.1;Parent=Thaps24399;constitutive=1;rank=1 chr11b . CDS 19926 20221 . + 0 ID=Thaps24399;Parent=Thaps24399;rank=2 chr11b . exon 19926 20221 . + . ID=Thaps24399.2;Parent=Thaps24399;constitutive=1;ensembl_end_phase=2;rank=2 chr11b . CDS 20447 21110 . + 0 ID=Thaps24399;Parent=Thaps24399;rank=3 chr11b . exon 20447 21110 . + . ID=Thaps24399.3;Parent=Thaps24399;constitutive=1;ensembl_end_phase=1;rank=3 chr11b ensembl protein_coding_gene 27561 29517 . - . ID=Thaps263844;biotype=protein_coding;description=Putative uncharacterized protein SUOX [Source:UniProtKB/TrEMBL%3BAcc:B8LC93];external_name=SUOX;logic_name=jgi_thaps3 chr11b ensembl transcript 27561 29517 . - . ID=Thaps263844;Parent=Thaps263844;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 27561 27853 . - 0 ID=Thaps263844;Parent=Thaps263844;rank=5 chr11b . exon 27561 27853 . - . ID=Thaps263844.5;Parent=Thaps263844;constitutive=1;ensembl_end_phase=2;rank=5 chr11b . CDS 27935 28372 . - 0 ID=Thaps263844;Parent=Thaps263844;rank=4 chr11b . CDS 28511 28766 . - 0 ID=Thaps263844;Parent=Thaps263844;rank=3 chr11b . CDS 28821 29137 . - 0 ID=Thaps263844;Parent=Thaps263844;rank=2 chr11b . CDS 29343 29517 . - 0 ID=Thaps263844;Parent=Thaps263844;rank=1 chr11b ensembl protein_coding_gene 21649 22341 . - . ID=Thaps8900;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC91];external_name=Thaps8900;logic_name=jgi_thaps3 chr11b ensembl transcript 21649 22341 . - . ID=Thaps8900;Parent=Thaps8900;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 21649 22341 . - 0 ID=Thaps8900;Parent=Thaps8900;rank=1 chr11b . exon 21649 22341 . - . ID=Thaps8900.1;Parent=Thaps8900;constitutive=1;rank=1 chr11b ensembl protein_coding_gene 24779 25915 . + . ID=Thaps8901;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC92];external_name=Thaps8901;logic_name=jgi_thaps3 chr11b ensembl transcript 24779 25915 . + . ID=Thaps8901;Parent=Thaps8901;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 24779 25915 . + 0 ID=Thaps8901;Parent=Thaps8901;rank=1 chr11b . exon 24779 25915 . + . ID=Thaps8901.1;Parent=Thaps8901;constitutive=1;rank=1 chr11b . exon 27935 28372 . - . ID=Thaps263844.4;Parent=Thaps263844;constitutive=1;rank=4 chr11b . exon 28511 28766 . - . ID=Thaps263844.3;Parent=Thaps263844;constitutive=1;ensembl_end_phase=1;rank=3 chr11b . exon 28821 29137 . - . ID=Thaps263844.2;Parent=Thaps263844;constitutive=1;ensembl_end_phase=2;rank=2 chr11b . exon 29343 29517 . - . ID=Thaps263844.1;Parent=Thaps263844;constitutive=1;ensembl_end_phase=1;rank=1 chr11b ensembl protein_coding_gene 30177 31694 . + . ID=Thaps8903;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC94];external_name=Thaps8903;logic_name=jgi_thaps3 chr11b ensembl transcript 30177 31694 . + . ID=Thaps8903;Parent=Thaps8903;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 30177 31694 . + 0 ID=Thaps8903;Parent=Thaps8903;rank=1 chr11b . exon 30177 31694 . + . ID=Thaps8903.1;Parent=Thaps8903;constitutive=1;rank=1 chr11b ensembl protein_coding_gene 31733 32959 . - . ID=Thaps8904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC95];external_name=Thaps8904;logic_name=jgi_thaps3 chr11b ensembl transcript 31733 32959 . - . ID=Thaps8904;Parent=Thaps8904;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 31733 32959 . - 0 ID=Thaps8904;Parent=Thaps8904;rank=1 chr11b . exon 31733 32959 . - . ID=Thaps8904.1;Parent=Thaps8904;constitutive=1;rank=1 chr11b ensembl protein_coding_gene 34482 35642 . - . ID=Thaps8905;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC96];external_name=Thaps8905;logic_name=jgi_thaps3 chr11b ensembl transcript 34482 35642 . - . ID=Thaps8905;Parent=Thaps8905;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 34482 35642 . - 0 ID=Thaps8905;Parent=Thaps8905;rank=1 chr11b . exon 34482 35642 . - . ID=Thaps8905.1;Parent=Thaps8905;constitutive=1;rank=1 chr11b . repeat_region 40323 40375 . ? . description=dust chr11b . repeat_region 40945 40983 . ? . description=trf chr11b ensembl protein_coding_gene 39842 43553 . + . ID=Thaps24401;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC99];external_name=Thaps24401;logic_name=jgi_thaps3 chr11b ensembl transcript 39842 43553 . + . ID=Thaps24401;Parent=Thaps24401;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 39842 42801 . + 0 ID=Thaps24401;Parent=Thaps24401;rank=1 chr11b . exon 39842 42801 . + . ID=Thaps24401.1;Parent=Thaps24401;constitutive=1;ensembl_end_phase=2;rank=1 chr11b . CDS 42889 42933 . + 0 ID=Thaps24401;Parent=Thaps24401;rank=2 chr11b . exon 42889 42933 . + . ID=Thaps24401.2;Parent=Thaps24401;constitutive=1;rank=2 chr11b . CDS 43010 43553 . + 0 ID=Thaps24401;Parent=Thaps24401;rank=3 chr11b . exon 43010 43553 . + . ID=Thaps24401.3;Parent=Thaps24401;constitutive=1;ensembl_end_phase=1;rank=3 chr11b ensembl protein_coding_gene 36958 37363 . + . ID=Thaps263845;biotype=protein_coding;description=RNA binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC97];external_name=Thaps263845;logic_name=jgi_thaps3 chr11b ensembl transcript 36958 37363 . + . ID=Thaps263845;Parent=Thaps263845;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 36958 37077 . + 0 ID=Thaps263845;Parent=Thaps263845;rank=1 chr11b . exon 36958 37077 . + . ID=Thaps263845.1;Parent=Thaps263845;constitutive=1;rank=1 chr11b . CDS 37102 37284 . + 0 ID=Thaps263845;Parent=Thaps263845;rank=2 chr11b . exon 37102 37284 . + . ID=Thaps263845.2;Parent=Thaps263845;constitutive=1;rank=2 chr11b . CDS 37311 37363 . + 0 ID=Thaps263845;Parent=Thaps263845;rank=3 chr11b . exon 37311 37363 . + . ID=Thaps263845.3;Parent=Thaps263845;constitutive=1;ensembl_end_phase=2;rank=3 chr11b ensembl protein_coding_gene 38132 38994 . + . ID=Thaps8907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC98];external_name=Thaps8907;logic_name=jgi_thaps3 chr11b ensembl transcript 38132 38994 . + . ID=Thaps8907;Parent=Thaps8907;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 38132 38207 . + 0 ID=Thaps8907;Parent=Thaps8907;rank=1 chr11b . exon 38132 38207 . + . ID=Thaps8907.1;Parent=Thaps8907;constitutive=1;ensembl_end_phase=1;rank=1 chr11b . CDS 38311 38349 . + 0 ID=Thaps8907;Parent=Thaps8907;rank=2 chr11b . exon 38311 38349 . + . ID=Thaps8907.2;Parent=Thaps8907;constitutive=1;rank=2 chr11b . CDS 38441 38595 . + 0 ID=Thaps8907;Parent=Thaps8907;rank=3 chr11b . exon 38441 38595 . + . ID=Thaps8907.3;Parent=Thaps8907;constitutive=1;ensembl_end_phase=2;rank=3 chr11b . CDS 38678 38864 . + 0 ID=Thaps8907;Parent=Thaps8907;rank=4 chr11b . exon 38678 38864 . + . ID=Thaps8907.4;Parent=Thaps8907;constitutive=1;ensembl_end_phase=1;rank=4 chr11b . CDS 38948 38994 . + 0 ID=Thaps8907;Parent=Thaps8907;rank=5 chr11b . exon 38948 38994 . + . ID=Thaps8907.5;Parent=Thaps8907;constitutive=1;ensembl_end_phase=2;rank=5 chr11b ensembl protein_coding_gene 43705 46274 . - . ID=Thaps8909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCA0];external_name=Thaps8909;logic_name=jgi_thaps3 chr11b ensembl transcript 43705 46274 . - . ID=Thaps8909;Parent=Thaps8909;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 43705 44499 . - 0 ID=Thaps8909;Parent=Thaps8909;rank=3 chr11b . exon 43705 44499 . - . ID=Thaps8909.3;Parent=Thaps8909;constitutive=1;rank=3 chr11b . CDS 44600 45216 . - 0 ID=Thaps8909;Parent=Thaps8909;rank=2 chr11b . exon 44600 45216 . - . ID=Thaps8909.2;Parent=Thaps8909;constitutive=1;ensembl_end_phase=2;rank=2 chr11b . CDS 45272 46274 . - 0 ID=Thaps8909;Parent=Thaps8909;rank=1 chr11b . exon 45272 46274 . - . ID=Thaps8909.1;Parent=Thaps8909;constitutive=1;ensembl_end_phase=1;rank=1 chr11b ensembl protein_coding_gene 55063 61374 . + . ID=Thaps24403;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCA4];external_name=Thaps24403;logic_name=jgi_thaps3 chr11b ensembl transcript 55063 61374 . + . ID=Thaps24403;Parent=Thaps24403;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 55063 60251 . + 0 ID=Thaps24403;Parent=Thaps24403;rank=1 chr11b . exon 55063 60251 . + . ID=Thaps24403.1;Parent=Thaps24403;constitutive=1;ensembl_end_phase=2;rank=1 chr11b . CDS 60342 61374 . + 0 ID=Thaps24403;Parent=Thaps24403;rank=2 chr11b ensembl protein_coding_gene 47214 48525 . + . ID=Thaps269590;biotype=protein_coding;description=Aldehyde reductase [Source:UniProtKB/TrEMBL%3BAcc:B8LCA1];external_name=Thaps269590;logic_name=jgi_thaps3 chr11b ensembl transcript 47214 48525 . + . ID=Thaps269590;Parent=Thaps269590;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 47214 47484 . + 0 ID=Thaps269590;Parent=Thaps269590;rank=1 chr11b . exon 47214 47484 . + . ID=Thaps269590.1;Parent=Thaps269590;constitutive=1;ensembl_end_phase=1;rank=1 chr11b . CDS 47653 47741 . + 0 ID=Thaps269590;Parent=Thaps269590;rank=2 chr11b . exon 47653 47741 . + . ID=Thaps269590.2;Parent=Thaps269590;constitutive=1;ensembl_end_phase=2;rank=2 chr11b . CDS 47896 48525 . + 0 ID=Thaps269590;Parent=Thaps269590;rank=3 chr11b . exon 47896 48525 . + . ID=Thaps269590.3;Parent=Thaps269590;constitutive=1;rank=3 chr11b ensembl protein_coding_gene 48838 51671 . - . ID=Thaps36753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCA2];external_name=Thaps36753;logic_name=jgi_thaps3 chr11b ensembl transcript 48838 51671 . - . ID=Thaps36753;Parent=Thaps36753;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 48838 49596 . - 0 ID=Thaps36753;Parent=Thaps36753;rank=5 chr11b . exon 48838 49596 . - . ID=Thaps36753.5;Parent=Thaps36753;constitutive=1;rank=5 chr11b . CDS 49697 49707 . - 0 ID=Thaps36753;Parent=Thaps36753;rank=4 chr11b . exon 49697 49707 . - . ID=Thaps36753.4;Parent=Thaps36753;constitutive=1;ensembl_end_phase=2;rank=4 chr11b . CDS 49814 50004 . - 0 ID=Thaps36753;Parent=Thaps36753;rank=3 chr11b . exon 49814 50004 . - . ID=Thaps36753.3;Parent=Thaps36753;constitutive=1;ensembl_end_phase=2;rank=3 chr11b . CDS 50233 50390 . - 0 ID=Thaps36753;Parent=Thaps36753;rank=2 chr11b . exon 50233 50390 . - . ID=Thaps36753.2;Parent=Thaps36753;constitutive=1;ensembl_end_phase=2;rank=2 chr11b . CDS 50895 51671 . - 0 ID=Thaps36753;Parent=Thaps36753;rank=1 chr11b . exon 50895 51671 . - . ID=Thaps36753.1;Parent=Thaps36753;constitutive=1;rank=1 chr11b ensembl protein_coding_gene 53152 54129 . + . ID=Thaps8912;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCA3];external_name=Thaps8912;logic_name=jgi_thaps3 chr11b ensembl transcript 53152 54129 . + . ID=Thaps8912;Parent=Thaps8912;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 53152 53381 . + 0 ID=Thaps8912;Parent=Thaps8912;rank=1 chr11b . exon 53152 53381 . + . ID=Thaps8912.1;Parent=Thaps8912;constitutive=1;ensembl_end_phase=2;rank=1 chr11b . CDS 53763 54129 . + 0 ID=Thaps8912;Parent=Thaps8912;rank=2 chr11b . exon 53763 54129 . + . ID=Thaps8912.2;Parent=Thaps8912;constitutive=1;ensembl_end_phase=1;rank=2 chr11b . repeat_region 64122 64135 . ? . description=dust chr11b . exon 60342 61374 . + . ID=Thaps24403.2;Parent=Thaps24403;constitutive=1;ensembl_end_phase=1;rank=2 chr11b ensembl protein_coding_gene 62576 64315 . - . ID=Thaps24404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCA5];external_name=Thaps24404;logic_name=jgi_thaps3 chr11b ensembl transcript 62576 64315 . - . ID=Thaps24404;Parent=Thaps24404;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 62576 63713 . - 0 ID=Thaps24404;Parent=Thaps24404;rank=2 chr11b . exon 62576 63713 . - . ID=Thaps24404.2;Parent=Thaps24404;constitutive=1;ensembl_end_phase=1;rank=2 chr11b . CDS 63819 64315 . - 0 ID=Thaps24404;Parent=Thaps24404;rank=1 chr11b . exon 63819 64315 . - . ID=Thaps24404.1;Parent=Thaps24404;constitutive=1;ensembl_end_phase=2;rank=1 chr11b . repeat_region 72013 72074 . ? . description=trf chr11b ensembl protein_coding_gene 68800 71772 . + . ID=Thaps263848;biotype=protein_coding;description=Chloride channel protein 7 [Source:UniProtKB/TrEMBL%3BAcc:B8LCA7];external_name=Thaps263848;logic_name=jgi_thaps3 chr11b ensembl transcript 68800 71772 . + . ID=Thaps263848;Parent=Thaps263848;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 68800 68915 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=1 chr11b . exon 68800 68915 . + . ID=Thaps263848.1;Parent=Thaps263848;constitutive=1;ensembl_end_phase=2;rank=1 chr11b . CDS 68973 69008 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=2 chr11b . exon 68973 69008 . + . ID=Thaps263848.2;Parent=Thaps263848;constitutive=1;rank=2 chr11b . CDS 69120 69466 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=3 chr11b . exon 69120 69466 . + . ID=Thaps263848.3;Parent=Thaps263848;constitutive=1;ensembl_end_phase=2;rank=3 chr11b . CDS 69573 69927 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=4 chr11b . exon 69573 69927 . + . ID=Thaps263848.4;Parent=Thaps263848;constitutive=1;ensembl_end_phase=1;rank=4 chr11b . CDS 70035 70194 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=5 chr11b . exon 70035 70194 . + . ID=Thaps263848.5;Parent=Thaps263848;constitutive=1;ensembl_end_phase=1;rank=5 chr11b . CDS 70314 70628 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=6 chr11b . exon 70314 70628 . + . ID=Thaps263848.6;Parent=Thaps263848;constitutive=1;rank=6 chr11b . CDS 70748 70871 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=7 chr11b . exon 70748 70871 . + . ID=Thaps263848.7;Parent=Thaps263848;constitutive=1;ensembl_end_phase=1;rank=7 chr11b . CDS 70965 71192 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=8 chr11b . exon 70965 71192 . + . ID=Thaps263848.8;Parent=Thaps263848;constitutive=1;rank=8 chr11b . CDS 71272 71357 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=9 chr11b . exon 71272 71357 . + . ID=Thaps263848.9;Parent=Thaps263848;constitutive=1;ensembl_end_phase=2;rank=9 chr11b . CDS 71412 71611 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=10 chr11b . exon 71412 71611 . + . ID=Thaps263848.10;Parent=Thaps263848;constitutive=1;ensembl_end_phase=2;rank=10 chr11b . CDS 71697 71772 . + 0 ID=Thaps263848;Parent=Thaps263848;rank=11 chr11b . exon 71697 71772 . + . ID=Thaps263848.11;Parent=Thaps263848;constitutive=1;ensembl_end_phase=1;rank=11 chr11b ensembl protein_coding_gene 64988 67411 . - . ID=Thaps8915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCA6];external_name=Thaps8915;logic_name=jgi_thaps3 chr11b ensembl transcript 64988 67411 . - . ID=Thaps8915;Parent=Thaps8915;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 64988 66951 . - 0 ID=Thaps8915;Parent=Thaps8915;rank=2 chr11b . exon 64988 66951 . - . ID=Thaps8915.2;Parent=Thaps8915;constitutive=1;ensembl_end_phase=2;rank=2 chr11b . CDS 67024 67411 . - 0 ID=Thaps8915;Parent=Thaps8915;rank=1 chr11b . exon 67024 67411 . - . ID=Thaps8915.1;Parent=Thaps8915;constitutive=1;ensembl_end_phase=1;rank=1 chr11b ensembl protein_coding_gene 72552 73142 . - . ID=Thaps8917;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCA8];external_name=Thaps8917;logic_name=jgi_thaps3 chr11b ensembl transcript 72552 73142 . - . ID=Thaps8917;Parent=Thaps8917;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 72552 73142 . - 0 ID=Thaps8917;Parent=Thaps8917;rank=1 chr11b . exon 72552 73142 . - . ID=Thaps8917.1;Parent=Thaps8917;constitutive=1;rank=1 chr11b ensembl protein_coding_gene 73590 74434 . + . ID=Thaps8918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCA9];external_name=Thaps8918;logic_name=jgi_thaps3 chr11b ensembl transcript 73590 74434 . + . ID=Thaps8918;Parent=Thaps8918;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 73590 73679 . + 0 ID=Thaps8918;Parent=Thaps8918;rank=1 chr11b . exon 73590 73679 . + . ID=Thaps8918.1;Parent=Thaps8918;constitutive=1;rank=1 chr11b . CDS 73841 74434 . + 0 ID=Thaps8918;Parent=Thaps8918;rank=2 chr11b . repeat_region 76225 76370 . - . description=Copia9I_TP chr11b . repeat_region 76987 77160 . - . description=SAT1_TP chr11b . repeat_region 77161 77333 . - . description=SAT1_TP chr11b . repeat_region 77334 77507 . - . description=SAT1_TP chr11b . repeat_region 77508 77681 . - . description=SAT1_TP chr11b . repeat_region 77682 77838 . - . description=SAT1_TP chr11b . repeat_region 77848 77999 . - . description=SAT1_TP chr11b . repeat_region 79069 79097 . ? . description=dust chr11b . repeat_region 80309 80814 . ? . description=dust chr11b . repeat_region 81167 81174 . ? . description=dust chr11b . repeat_region 81299 81306 . ? . description=dust chr11b . repeat_region 81601 81954 . - . description=Harbinger2N_TP chr11b . repeat_region 81621 81767 . ? . description=dust chr11b . repeat_region 81848 81908 . ? . description=dust chr11b . repeat_region 81959 82057 . ? . description=dust chr11b . repeat_region 81960 82140 . - . description=Harbinger2N_TP chr11b . repeat_region 82414 82466 . - . description=MuDR1_TP chr11b . repeat_region 82712 82843 . ? . description=dust chr11b ensembl protein_coding_gene 77614 78233 . - . ID=Thaps263849;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB1];external_name=Thaps263849;logic_name=jgi_thaps3 chr11b ensembl transcript 77614 78233 . - . ID=Thaps263849;Parent=Thaps263849;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 77614 77911 . - 0 ID=Thaps263849;Parent=Thaps263849;rank=3 chr11b . exon 77614 77911 . - . ID=Thaps263849.3;Parent=Thaps263849;constitutive=1;ensembl_end_phase=1;rank=3 chr11b . CDS 78068 78081 . - 0 ID=Thaps263849;Parent=Thaps263849;rank=2 chr11b . exon 78068 78081 . - . ID=Thaps263849.2;Parent=Thaps263849;constitutive=1;ensembl_end_phase=2;rank=2 chr11b . CDS 78230 78233 . - 0 ID=Thaps263849;Parent=Thaps263849;rank=1 chr11b . exon 78230 78233 . - . ID=Thaps263849.1;Parent=Thaps263849;constitutive=1;ensembl_end_phase=1;rank=1 chr11b . exon 73841 74434 . + . ID=Thaps8918.2;Parent=Thaps8918;constitutive=1;rank=2 chr11b ensembl protein_coding_gene 74586 75785 . + . ID=Thaps8919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB0];external_name=Thaps8919;logic_name=jgi_thaps3 chr11b ensembl transcript 74586 75785 . + . ID=Thaps8919;Parent=Thaps8919;biotype=protein_coding;logic_name=jgi_thaps3 chr11b . CDS 74586 75785 . + 0 ID=Thaps8919;Parent=Thaps8919;rank=1 chr11b . exon 74586 75785 . + . ID=Thaps8919.1;Parent=Thaps8919;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_20x5 1 83390 bd_20x5 . repeat_region 3076 3084 . ? . description=dust bd_20x5 . repeat_region 3474 3501 . ? . description=trf bd_20x5 . repeat_region 3474 3501 . ? . description=dust bd_20x5 . repeat_region 4609 4679 . ? . description=dust bd_20x5 . repeat_region 4638 4675 . ? . description=trf bd_20x5 . repeat_region 5017 5066 . ? . description=dust bd_20x5 . repeat_region 6868 7024 . - . description=Gypsy3LTR_TP bd_20x5 ensembl protein_coding_gene 3217 4340 . + . ID=Thapsdraft1527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 3217 4340 . + . ID=Thapsdraft1527;Parent=Thapsdraft1527;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 3217 3407 . + 0 ID=Thapsdraft1527;Parent=Thapsdraft1527;rank=1 bd_20x5 . exon 3217 3407 . + . ID=Thapsdraft1527.1;Parent=Thapsdraft1527;constitutive=1;ensembl_end_phase=2;rank=1 bd_20x5 . CDS 3515 4340 . + 0 ID=Thapsdraft1527;Parent=Thapsdraft1527;rank=2 bd_20x5 . exon 3515 4340 . + . ID=Thapsdraft1527.2;Parent=Thapsdraft1527;constitutive=1;ensembl_end_phase=1;rank=2 bd_20x5 ensembl protein_coding_gene 4803 6711 . + . ID=Thapsdraft1855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEH8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 4803 6711 . + . ID=Thapsdraft1855;Parent=Thapsdraft1855;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 4803 5013 . + 0 ID=Thapsdraft1855;Parent=Thapsdraft1855;rank=1 bd_20x5 . exon 4803 5013 . + . ID=Thapsdraft1855.1;Parent=Thapsdraft1855;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 . CDS 5124 5197 . + 0 ID=Thapsdraft1855;Parent=Thapsdraft1855;rank=2 bd_20x5 . exon 5124 5197 . + . ID=Thapsdraft1855.2;Parent=Thapsdraft1855;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . CDS 5306 5881 . + 0 ID=Thapsdraft1855;Parent=Thapsdraft1855;rank=3 bd_20x5 . exon 5306 5881 . + . ID=Thapsdraft1855.3;Parent=Thapsdraft1855;constitutive=1;rank=3 bd_20x5 . CDS 5992 6711 . + 0 ID=Thapsdraft1855;Parent=Thapsdraft1855;rank=4 bd_20x5 . exon 5992 6711 . + . ID=Thapsdraft1855.4;Parent=Thapsdraft1855;constitutive=1;rank=4 bd_20x5 ensembl protein_coding_gene 83 2921 . + . ID=Thapsdraft858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEH4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 83 2921 . + . ID=Thapsdraft858;Parent=Thapsdraft858;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 83 865 . + 0 ID=Thapsdraft858;Parent=Thapsdraft858;rank=1 bd_20x5 . exon 83 865 . + . ID=Thapsdraft858.1;Parent=Thapsdraft858;constitutive=1;rank=1 bd_20x5 . CDS 947 1277 . + 0 ID=Thapsdraft858;Parent=Thapsdraft858;rank=2 bd_20x5 . exon 947 1277 . + . ID=Thapsdraft858.2;Parent=Thapsdraft858;constitutive=1;ensembl_end_phase=1;rank=2 bd_20x5 . CDS 1403 2196 . + 0 ID=Thapsdraft858;Parent=Thapsdraft858;rank=3 bd_20x5 . exon 1403 2196 . + . ID=Thapsdraft858.3;Parent=Thapsdraft858;constitutive=1;ensembl_end_phase=2;rank=3 bd_20x5 . CDS 2271 2921 . + 0 ID=Thapsdraft858;Parent=Thapsdraft858;rank=4 bd_20x5 . exon 2271 2921 . + . ID=Thapsdraft858.4;Parent=Thapsdraft858;constitutive=1;rank=4 bd_20x5 ensembl protein_coding_gene 7940 9919 . + . ID=Thapsdraft861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEH9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 7940 9919 . + . ID=Thapsdraft861;Parent=Thapsdraft861;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 7940 9139 . + 0 ID=Thapsdraft861;Parent=Thapsdraft861;rank=1 bd_20x5 . exon 7940 9139 . + . ID=Thapsdraft861.1;Parent=Thapsdraft861;constitutive=1;rank=1 bd_20x5 . CDS 9233 9919 . + 0 ID=Thapsdraft861;Parent=Thapsdraft861;rank=2 bd_20x5 . exon 9233 9919 . + . ID=Thapsdraft861.2;Parent=Thapsdraft861;constitutive=1;rank=2 bd_20x5 ensembl tRNA_gene 15118 15190 . + . ID=EPrTPOG00000000101;biotype=tRNA;description=tRNA-Lys for anticodon UUU [Source:TRNASCAN_SE%3BAcc:tRNA-Lys];external_name=tRNA-Lys;logic_name=ncrna_eg bd_20x5 ensembl transcript 15118 15190 . + . ID=EPrTPOT00000000101;Parent=EPrTPOG00000000101;biotype=tRNA;logic_name=ncrna_eg bd_20x5 . exon 15118 15190 . + . ID=EPrTPOE00000000101;Parent=EPrTPOT00000000101;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 ensembl protein_coding_gene 17126 18879 . - . ID=Thapsdraft1216;biotype=protein_coding;description=Microsomal delta-4 desaturase [Source:UniProtKB/TrEMBL%3BAcc:B8LEI2];external_name=DES4;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 17126 18879 . - . ID=Thapsdraft1216;Parent=Thapsdraft1216;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 17126 17956 . - 0 ID=Thapsdraft1216;Parent=Thapsdraft1216;rank=2 bd_20x5 . exon 17126 17956 . - . ID=Thapsdraft1216.2;Parent=Thapsdraft1216;constitutive=1;rank=2 bd_20x5 . CDS 18058 18879 . - 0 ID=Thapsdraft1216;Parent=Thapsdraft1216;rank=1 bd_20x5 . exon 18058 18879 . - . ID=Thapsdraft1216.1;Parent=Thapsdraft1216;constitutive=1;rank=1 bd_20x5 ensembl protein_coding_gene 13522 14856 . + . ID=Thapsdraft74;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEI0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 13522 14856 . + . ID=Thapsdraft74;Parent=Thapsdraft74;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 13522 13570 . + 0 ID=Thapsdraft74;Parent=Thapsdraft74;rank=1 bd_20x5 . exon 13522 13570 . + . ID=Thapsdraft74.1;Parent=Thapsdraft74;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 . CDS 13688 13977 . + 0 ID=Thapsdraft74;Parent=Thapsdraft74;rank=2 bd_20x5 . exon 13688 13977 . + . ID=Thapsdraft74.2;Parent=Thapsdraft74;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . CDS 14119 14167 . + 0 ID=Thapsdraft74;Parent=Thapsdraft74;rank=3 bd_20x5 . exon 14119 14167 . + . ID=Thapsdraft74.3;Parent=Thapsdraft74;constitutive=1;ensembl_end_phase=1;rank=3 bd_20x5 . CDS 14219 14856 . + 0 ID=Thapsdraft74;Parent=Thapsdraft74;rank=4 bd_20x5 . exon 14219 14856 . + . ID=Thapsdraft74.4;Parent=Thapsdraft74;constitutive=1;ensembl_end_phase=2;rank=4 bd_20x5 ensembl protein_coding_gene 15526 16983 . + . ID=Thapsdraft863;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEI1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 15526 16983 . + . ID=Thapsdraft863;Parent=Thapsdraft863;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 15526 16983 . + 0 ID=Thapsdraft863;Parent=Thapsdraft863;rank=1 bd_20x5 . exon 15526 16983 . + . ID=Thapsdraft863.1;Parent=Thapsdraft863;constitutive=1;rank=1 bd_20x5 . repeat_region 23425 23447 . ? . description=trf bd_20x5 . repeat_region 23425 23447 . ? . description=dust bd_20x5 . repeat_region 24205 24213 . ? . description=dust bd_20x5 ensembl protein_coding_gene 24739 26395 . + . ID=Thapsdraft1221;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEH2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 24739 26395 . + . ID=Thapsdraft1221;Parent=Thapsdraft1221;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 24739 25278 . + 0 ID=Thapsdraft1221;Parent=Thapsdraft1221;rank=1 bd_20x5 . exon 24739 25278 . + . ID=Thapsdraft1221.1;Parent=Thapsdraft1221;constitutive=1;rank=1 bd_20x5 . CDS 25370 25807 . + 0 ID=Thapsdraft1221;Parent=Thapsdraft1221;rank=2 bd_20x5 . exon 25370 25807 . + . ID=Thapsdraft1221.2;Parent=Thapsdraft1221;constitutive=1;rank=2 bd_20x5 . CDS 25880 26395 . + 0 ID=Thapsdraft1221;Parent=Thapsdraft1221;rank=3 bd_20x5 . exon 25880 26395 . + . ID=Thapsdraft1221.3;Parent=Thapsdraft1221;constitutive=1;rank=3 bd_20x5 ensembl protein_coding_gene 23117 23823 . - . ID=Thapsdraft1857;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEH1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 23117 23823 . - . ID=Thapsdraft1857;Parent=Thapsdraft1857;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 23117 23369 . - 0 ID=Thapsdraft1857;Parent=Thapsdraft1857;rank=2 bd_20x5 . exon 23117 23369 . - . ID=Thapsdraft1857.2;Parent=Thapsdraft1857;constitutive=1;ensembl_end_phase=1;rank=2 bd_20x5 . CDS 23501 23823 . - 0 ID=Thapsdraft1857;Parent=Thapsdraft1857;rank=1 bd_20x5 . exon 23501 23823 . - . ID=Thapsdraft1857.1;Parent=Thapsdraft1857;constitutive=1;ensembl_end_phase=2;rank=1 bd_20x5 ensembl protein_coding_gene 19439 20212 . + . ID=Thapsdraft211;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEI3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 19439 20212 . + . ID=Thapsdraft211;Parent=Thapsdraft211;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 19439 19922 . + 0 ID=Thapsdraft211;Parent=Thapsdraft211;rank=1 bd_20x5 . exon 19439 19922 . + . ID=Thapsdraft211.1;Parent=Thapsdraft211;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 . CDS 20019 20212 . + 0 ID=Thapsdraft211;Parent=Thapsdraft211;rank=2 bd_20x5 . exon 20019 20212 . + . ID=Thapsdraft211.2;Parent=Thapsdraft211;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 ensembl protein_coding_gene 21548 22963 . + . ID=Thapsdraft870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEI6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 21548 22963 . + . ID=Thapsdraft870;Parent=Thapsdraft870;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 21548 22963 . + 0 ID=Thapsdraft870;Parent=Thapsdraft870;rank=1 bd_20x5 . exon 21548 22963 . + . ID=Thapsdraft870.1;Parent=Thapsdraft870;constitutive=1;rank=1 bd_20x5 ensembl protein_coding_gene 36033 36618 . - . ID=Thapsdraft153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEI4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 36033 36618 . - . ID=Thapsdraft153;Parent=Thapsdraft153;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 36033 36220 . - 0 ID=Thapsdraft153;Parent=Thapsdraft153;rank=3 bd_20x5 . exon 36033 36220 . - . ID=Thapsdraft153.3;Parent=Thapsdraft153;constitutive=1;ensembl_end_phase=2;rank=3 bd_20x5 . CDS 36263 36324 . - 0 ID=Thapsdraft153;Parent=Thapsdraft153;rank=2 bd_20x5 . exon 36263 36324 . - . ID=Thapsdraft153.2;Parent=Thapsdraft153;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . CDS 36410 36618 . - 0 ID=Thapsdraft153;Parent=Thapsdraft153;rank=1 bd_20x5 . exon 36410 36618 . - . ID=Thapsdraft153.1;Parent=Thapsdraft153;constitutive=1;ensembl_end_phase=2;rank=1 bd_20x5 ensembl protein_coding_gene 32412 35389 . + . ID=Thapsdraft446;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEH7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 32412 35389 . + . ID=Thapsdraft446;Parent=Thapsdraft446;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 32412 32619 . + 0 ID=Thapsdraft446;Parent=Thapsdraft446;rank=1 bd_20x5 . exon 32412 32619 . + . ID=Thapsdraft446.1;Parent=Thapsdraft446;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 . CDS 32703 33169 . + 0 ID=Thapsdraft446;Parent=Thapsdraft446;rank=2 bd_20x5 . exon 32703 33169 . + . ID=Thapsdraft446.2;Parent=Thapsdraft446;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . CDS 33252 33333 . + 0 ID=Thapsdraft446;Parent=Thapsdraft446;rank=3 bd_20x5 . exon 33252 33333 . + . ID=Thapsdraft446.3;Parent=Thapsdraft446;constitutive=1;ensembl_end_phase=1;rank=3 bd_20x5 . CDS 33409 33582 . + 0 ID=Thapsdraft446;Parent=Thapsdraft446;rank=4 bd_20x5 . exon 33409 33582 . + . ID=Thapsdraft446.4;Parent=Thapsdraft446;constitutive=1;rank=4 bd_20x5 . CDS 33667 33853 . + 0 ID=Thapsdraft446;Parent=Thapsdraft446;rank=5 bd_20x5 . exon 33667 33853 . + . ID=Thapsdraft446.5;Parent=Thapsdraft446;constitutive=1;ensembl_end_phase=1;rank=5 bd_20x5 . CDS 33922 34445 . + 0 ID=Thapsdraft446;Parent=Thapsdraft446;rank=6 bd_20x5 . exon 33922 34445 . + . ID=Thapsdraft446.6;Parent=Thapsdraft446;constitutive=1;ensembl_end_phase=2;rank=6 bd_20x5 . CDS 34494 34628 . + 0 ID=Thapsdraft446;Parent=Thapsdraft446;rank=7 bd_20x5 . exon 34494 34628 . + . ID=Thapsdraft446.7;Parent=Thapsdraft446;constitutive=1;rank=7 bd_20x5 . CDS 34716 35009 . + 0 ID=Thapsdraft446;Parent=Thapsdraft446;rank=8 bd_20x5 . exon 34716 35009 . + . ID=Thapsdraft446.8;Parent=Thapsdraft446;constitutive=1;rank=8 bd_20x5 . CDS 35037 35389 . + 0 ID=Thapsdraft446;Parent=Thapsdraft446;rank=9 bd_20x5 . exon 35037 35389 . + . ID=Thapsdraft446.9;Parent=Thapsdraft446;constitutive=1;ensembl_end_phase=2;rank=9 bd_20x5 ensembl protein_coding_gene 28041 29429 . - . ID=Thapsdraft874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEH3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 28041 29429 . - . ID=Thapsdraft874;Parent=Thapsdraft874;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 28041 29429 . - 0 ID=Thapsdraft874;Parent=Thapsdraft874;rank=1 bd_20x5 . exon 28041 29429 . - . ID=Thapsdraft874.1;Parent=Thapsdraft874;constitutive=1;rank=1 bd_20x5 ensembl protein_coding_gene 30062 32307 . + . ID=Thapsdraft875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEH6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 30062 32307 . + . ID=Thapsdraft875;Parent=Thapsdraft875;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 30062 30180 . + 0 ID=Thapsdraft875;Parent=Thapsdraft875;rank=1 bd_20x5 . exon 30062 30180 . + . ID=Thapsdraft875.1;Parent=Thapsdraft875;constitutive=1;ensembl_end_phase=2;rank=1 bd_20x5 . CDS 30449 32307 . + 0 ID=Thapsdraft875;Parent=Thapsdraft875;rank=2 bd_20x5 . exon 30449 32307 . + . ID=Thapsdraft875.2;Parent=Thapsdraft875;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . repeat_region 38503 38552 . ? . description=dust bd_20x5 . repeat_region 42735 42780 . ? . description=trf bd_20x5 . repeat_region 42743 42780 . ? . description=trf bd_20x5 . repeat_region 43897 43922 . ? . description=trf bd_20x5 ensembl protein_coding_gene 44037 45902 . - . ID=Thapsdraft1861;biotype=protein_coding;description=Elongation factor 1-alpha [Source:UniProtKB/TrEMBL%3BAcc:B8LEI9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 44037 45902 . - . ID=Thapsdraft1861;Parent=Thapsdraft1861;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 44037 44599 . - 0 ID=Thapsdraft1861;Parent=Thapsdraft1861;rank=6 bd_20x5 . exon 44037 44599 . - . ID=Thapsdraft1861.6;Parent=Thapsdraft1861;constitutive=1;ensembl_end_phase=2;rank=6 bd_20x5 . CDS 44683 44707 . - 0 ID=Thapsdraft1861;Parent=Thapsdraft1861;rank=5 bd_20x5 . exon 44683 44707 . - . ID=Thapsdraft1861.5;Parent=Thapsdraft1861;constitutive=1;ensembl_end_phase=1;rank=5 bd_20x5 . CDS 44791 45405 . - 0 ID=Thapsdraft1861;Parent=Thapsdraft1861;rank=4 bd_20x5 . exon 44791 45405 . - . ID=Thapsdraft1861.4;Parent=Thapsdraft1861;constitutive=1;rank=4 bd_20x5 . CDS 45499 45652 . - 0 ID=Thapsdraft1861;Parent=Thapsdraft1861;rank=3 bd_20x5 . exon 45499 45652 . - . ID=Thapsdraft1861.3;Parent=Thapsdraft1861;constitutive=1;ensembl_end_phase=1;rank=3 bd_20x5 . CDS 45724 45755 . - 0 ID=Thapsdraft1861;Parent=Thapsdraft1861;rank=2 bd_20x5 . exon 45724 45755 . - . ID=Thapsdraft1861.2;Parent=Thapsdraft1861;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . CDS 45837 45902 . - 0 ID=Thapsdraft1861;Parent=Thapsdraft1861;rank=1 bd_20x5 . exon 45837 45902 . - . ID=Thapsdraft1861.1;Parent=Thapsdraft1861;constitutive=1;rank=1 bd_20x5 ensembl protein_coding_gene 37122 38453 . + . ID=Thapsdraft877;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEI5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 37122 38453 . + . ID=Thapsdraft877;Parent=Thapsdraft877;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 37122 38453 . + 0 ID=Thapsdraft877;Parent=Thapsdraft877;rank=1 bd_20x5 . exon 37122 38453 . + . ID=Thapsdraft877.1;Parent=Thapsdraft877;constitutive=1;rank=1 bd_20x5 ensembl protein_coding_gene 38681 40092 . - . ID=Thapsdraft878;biotype=protein_coding;description=Aspartate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8LEI7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 38681 40092 . - . ID=Thapsdraft878;Parent=Thapsdraft878;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 38681 38826 . - 0 ID=Thapsdraft878;Parent=Thapsdraft878;rank=6 bd_20x5 . exon 38681 38826 . - . ID=Thapsdraft878.6;Parent=Thapsdraft878;constitutive=1;ensembl_end_phase=2;rank=6 bd_20x5 . CDS 38921 39191 . - 0 ID=Thapsdraft878;Parent=Thapsdraft878;rank=5 bd_20x5 . exon 38921 39191 . - . ID=Thapsdraft878.5;Parent=Thapsdraft878;constitutive=1;ensembl_end_phase=1;rank=5 bd_20x5 . CDS 39225 39329 . - 0 ID=Thapsdraft878;Parent=Thapsdraft878;rank=4 bd_20x5 . exon 39225 39329 . - . ID=Thapsdraft878.4;Parent=Thapsdraft878;constitutive=1;rank=4 bd_20x5 . CDS 39354 39639 . - 0 ID=Thapsdraft878;Parent=Thapsdraft878;rank=3 bd_20x5 . exon 39354 39639 . - . ID=Thapsdraft878.3;Parent=Thapsdraft878;constitutive=1;ensembl_end_phase=1;rank=3 bd_20x5 . CDS 39703 39902 . - 0 ID=Thapsdraft878;Parent=Thapsdraft878;rank=2 bd_20x5 . exon 39703 39902 . - . ID=Thapsdraft878.2;Parent=Thapsdraft878;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . CDS 39981 40092 . - 0 ID=Thapsdraft878;Parent=Thapsdraft878;rank=1 bd_20x5 . exon 39981 40092 . - . ID=Thapsdraft878.1;Parent=Thapsdraft878;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 ensembl protein_coding_gene 42439 43667 . - . ID=Thapsdraft879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEI8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 42439 43667 . - . ID=Thapsdraft879;Parent=Thapsdraft879;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 42439 42729 . - 0 ID=Thapsdraft879;Parent=Thapsdraft879;rank=2 bd_20x5 . exon 42439 42729 . - . ID=Thapsdraft879.2;Parent=Thapsdraft879;constitutive=1;rank=2 bd_20x5 . CDS 43059 43667 . - 0 ID=Thapsdraft879;Parent=Thapsdraft879;rank=1 bd_20x5 . exon 43059 43667 . - . ID=Thapsdraft879.1;Parent=Thapsdraft879;constitutive=1;rank=1 bd_20x5 ensembl protein_coding_gene 52741 53556 . - . ID=Thapsdraft884;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 52741 53556 . - . ID=Thapsdraft884;Parent=Thapsdraft884;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 52741 52884 . - 0 ID=Thapsdraft884;Parent=Thapsdraft884;rank=3 bd_20x5 . exon 52741 52884 . - . ID=Thapsdraft884.3;Parent=Thapsdraft884;constitutive=1;rank=3 bd_20x5 . CDS 53025 53174 . - 0 ID=Thapsdraft884;Parent=Thapsdraft884;rank=2 bd_20x5 . exon 53025 53174 . - . ID=Thapsdraft884.2;Parent=Thapsdraft884;constitutive=1;rank=2 bd_20x5 . CDS 53368 53556 . - 0 ID=Thapsdraft884;Parent=Thapsdraft884;rank=1 bd_20x5 . exon 53368 53556 . - . ID=Thapsdraft884.1;Parent=Thapsdraft884;constitutive=1;rank=1 bd_20x5 ensembl protein_coding_gene 53830 54541 . + . ID=Thapsdraft885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 53830 54541 . + . ID=Thapsdraft885;Parent=Thapsdraft885;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 53830 54000 . + 0 ID=Thapsdraft885;Parent=Thapsdraft885;rank=1 bd_20x5 . exon 53830 54000 . + . ID=Thapsdraft885.1;Parent=Thapsdraft885;constitutive=1;rank=1 bd_20x5 . CDS 54118 54270 . + 0 ID=Thapsdraft885;Parent=Thapsdraft885;rank=2 bd_20x5 . exon 54118 54270 . + . ID=Thapsdraft885.2;Parent=Thapsdraft885;constitutive=1;rank=2 bd_20x5 . CDS 54404 54541 . + 0 ID=Thapsdraft885;Parent=Thapsdraft885;rank=3 bd_20x5 . exon 54404 54541 . + . ID=Thapsdraft885.3;Parent=Thapsdraft885;constitutive=1;rank=3 bd_20x5 ensembl protein_coding_gene 55128 57286 . - . ID=Thapsdraft886;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 55128 57286 . - . ID=Thapsdraft886;Parent=Thapsdraft886;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 55128 55208 . - 0 ID=Thapsdraft886;Parent=Thapsdraft886;rank=9 bd_20x5 . exon 55128 55208 . - . ID=Thapsdraft886.9;Parent=Thapsdraft886;constitutive=1;rank=9 bd_20x5 . CDS 55289 55431 . - 0 ID=Thapsdraft886;Parent=Thapsdraft886;rank=8 bd_20x5 . exon 55289 55431 . - . ID=Thapsdraft886.8;Parent=Thapsdraft886;constitutive=1;ensembl_end_phase=2;rank=8 bd_20x5 . CDS 55659 55707 . - 0 ID=Thapsdraft886;Parent=Thapsdraft886;rank=7 bd_20x5 . CDS 55850 55934 . - 0 ID=Thapsdraft886;Parent=Thapsdraft886;rank=6 bd_20x5 . CDS 56032 56057 . - 0 ID=Thapsdraft886;Parent=Thapsdraft886;rank=5 bd_20x5 . CDS 56142 56231 . - 0 ID=Thapsdraft886;Parent=Thapsdraft886;rank=4 bd_20x5 . CDS 56371 56401 . - 0 ID=Thapsdraft886;Parent=Thapsdraft886;rank=3 bd_20x5 . CDS 56623 57047 . - 0 ID=Thapsdraft886;Parent=Thapsdraft886;rank=2 bd_20x5 . CDS 57218 57286 . - 0 ID=Thapsdraft886;Parent=Thapsdraft886;rank=1 bd_20x5 . repeat_region 62364 62419 . ? . description=dust bd_20x5 . repeat_region 62370 62416 . ? . description=trf bd_20x5 . repeat_region 62379 62421 . ? . description=trf bd_20x5 . repeat_region 62380 62419 . ? . description=trf bd_20x5 . repeat_region 62380 62419 . ? . description=trf bd_20x5 . repeat_region 63843 63889 . ? . description=dust bd_20x5 . repeat_region 63844 63884 . ? . description=trf bd_20x5 . repeat_region 63844 63884 . ? . description=trf bd_20x5 . repeat_region 64157 64187 . ? . description=dust bd_20x5 ensembl protein_coding_gene 62163 62897 . + . ID=Thapsdraft1863;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 62163 62897 . + . ID=Thapsdraft1863;Parent=Thapsdraft1863;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 62163 62421 . + 0 ID=Thapsdraft1863;Parent=Thapsdraft1863;rank=1 bd_20x5 . exon 62163 62421 . + . ID=Thapsdraft1863.1;Parent=Thapsdraft1863;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 . CDS 62560 62897 . + 0 ID=Thapsdraft1863;Parent=Thapsdraft1863;rank=2 bd_20x5 . exon 62560 62897 . + . ID=Thapsdraft1863.2;Parent=Thapsdraft1863;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . exon 55659 55707 . - . ID=Thapsdraft886.7;Parent=Thapsdraft886;constitutive=1;ensembl_end_phase=1;rank=7 bd_20x5 . exon 55850 55934 . - . ID=Thapsdraft886.6;Parent=Thapsdraft886;constitutive=1;ensembl_end_phase=1;rank=6 bd_20x5 . exon 56032 56057 . - . ID=Thapsdraft886.5;Parent=Thapsdraft886;constitutive=1;ensembl_end_phase=2;rank=5 bd_20x5 . exon 56142 56231 . - . ID=Thapsdraft886.4;Parent=Thapsdraft886;constitutive=1;rank=4 bd_20x5 . exon 56371 56401 . - . ID=Thapsdraft886.3;Parent=Thapsdraft886;constitutive=1;ensembl_end_phase=1;rank=3 bd_20x5 . exon 56623 57047 . - . ID=Thapsdraft886.2;Parent=Thapsdraft886;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . exon 57218 57286 . - . ID=Thapsdraft886.1;Parent=Thapsdraft886;constitutive=1;rank=1 bd_20x5 ensembl protein_coding_gene 58125 59368 . - . ID=Thapsdraft887;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 58125 59368 . - . ID=Thapsdraft887;Parent=Thapsdraft887;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 58125 58408 . - 0 ID=Thapsdraft887;Parent=Thapsdraft887;rank=3 bd_20x5 . exon 58125 58408 . - . ID=Thapsdraft887.3;Parent=Thapsdraft887;constitutive=1;ensembl_end_phase=2;rank=3 bd_20x5 . CDS 58678 58872 . - 0 ID=Thapsdraft887;Parent=Thapsdraft887;rank=2 bd_20x5 . exon 58678 58872 . - . ID=Thapsdraft887.2;Parent=Thapsdraft887;constitutive=1;rank=2 bd_20x5 . CDS 58999 59368 . - 0 ID=Thapsdraft887;Parent=Thapsdraft887;rank=1 bd_20x5 . exon 58999 59368 . - . ID=Thapsdraft887.1;Parent=Thapsdraft887;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 ensembl protein_coding_gene 60481 61020 . + . ID=Thapsdraft888;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 60481 61020 . + . ID=Thapsdraft888;Parent=Thapsdraft888;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 60481 60860 . + 0 ID=Thapsdraft888;Parent=Thapsdraft888;rank=1 bd_20x5 . exon 60481 60860 . + . ID=Thapsdraft888.1;Parent=Thapsdraft888;constitutive=1;ensembl_end_phase=2;rank=1 bd_20x5 . CDS 60897 61020 . + 0 ID=Thapsdraft888;Parent=Thapsdraft888;rank=2 bd_20x5 . exon 60897 61020 . + . ID=Thapsdraft888.2;Parent=Thapsdraft888;constitutive=1;ensembl_end_phase=1;rank=2 bd_20x5 ensembl protein_coding_gene 63904 65531 . + . ID=Thapsdraft890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 63904 65531 . + . ID=Thapsdraft890;Parent=Thapsdraft890;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 63904 64832 . + 0 ID=Thapsdraft890;Parent=Thapsdraft890;rank=1 bd_20x5 . exon 63904 64832 . + . ID=Thapsdraft890.1;Parent=Thapsdraft890;constitutive=1;ensembl_end_phase=2;rank=1 bd_20x5 . CDS 64949 65531 . + 0 ID=Thapsdraft890;Parent=Thapsdraft890;rank=2 bd_20x5 ensembl protein_coding_gene 66784 68282 . + . ID=Thapsdraft1214;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 66784 68282 . + . ID=Thapsdraft1214;Parent=Thapsdraft1214;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 66784 66900 . + 0 ID=Thapsdraft1214;Parent=Thapsdraft1214;rank=1 bd_20x5 . exon 66784 66900 . + . ID=Thapsdraft1214.1;Parent=Thapsdraft1214;constitutive=1;rank=1 bd_20x5 . CDS 66999 67166 . + 0 ID=Thapsdraft1214;Parent=Thapsdraft1214;rank=2 bd_20x5 . exon 66999 67166 . + . ID=Thapsdraft1214.2;Parent=Thapsdraft1214;constitutive=1;rank=2 bd_20x5 . CDS 67257 67557 . + 0 ID=Thapsdraft1214;Parent=Thapsdraft1214;rank=3 bd_20x5 . exon 67257 67557 . + . ID=Thapsdraft1214.3;Parent=Thapsdraft1214;constitutive=1;ensembl_end_phase=1;rank=3 bd_20x5 . CDS 67637 67690 . + 0 ID=Thapsdraft1214;Parent=Thapsdraft1214;rank=4 bd_20x5 . exon 67637 67690 . + . ID=Thapsdraft1214.4;Parent=Thapsdraft1214;constitutive=1;rank=4 bd_20x5 . CDS 67764 67864 . + 0 ID=Thapsdraft1214;Parent=Thapsdraft1214;rank=5 bd_20x5 . exon 67764 67864 . + . ID=Thapsdraft1214.5;Parent=Thapsdraft1214;constitutive=1;ensembl_end_phase=2;rank=5 bd_20x5 . CDS 67941 68282 . + 0 ID=Thapsdraft1214;Parent=Thapsdraft1214;rank=6 bd_20x5 . exon 67941 68282 . + . ID=Thapsdraft1214.6;Parent=Thapsdraft1214;constitutive=1;rank=6 bd_20x5 . exon 64949 65531 . + . ID=Thapsdraft890.2;Parent=Thapsdraft890;constitutive=1;ensembl_end_phase=1;rank=2 bd_20x5 ensembl protein_coding_gene 69107 69987 . - . ID=Thapsdraft894;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 69107 69987 . - . ID=Thapsdraft894;Parent=Thapsdraft894;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 69107 69638 . - 0 ID=Thapsdraft894;Parent=Thapsdraft894;rank=3 bd_20x5 . exon 69107 69638 . - . ID=Thapsdraft894.3;Parent=Thapsdraft894;constitutive=1;ensembl_end_phase=1;rank=3 bd_20x5 . CDS 69750 69818 . - 0 ID=Thapsdraft894;Parent=Thapsdraft894;rank=2 bd_20x5 . exon 69750 69818 . - . ID=Thapsdraft894.2;Parent=Thapsdraft894;constitutive=1;rank=2 bd_20x5 . CDS 69921 69987 . - 0 ID=Thapsdraft894;Parent=Thapsdraft894;rank=1 bd_20x5 . exon 69921 69987 . - . ID=Thapsdraft894.1;Parent=Thapsdraft894;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 ensembl protein_coding_gene 70244 75075 . - . ID=Thapsdraft895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 70244 75075 . - . ID=Thapsdraft895;Parent=Thapsdraft895;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 70244 70317 . - 0 ID=Thapsdraft895;Parent=Thapsdraft895;rank=4 bd_20x5 . exon 70244 70317 . - . ID=Thapsdraft895.4;Parent=Thapsdraft895;constitutive=1;ensembl_end_phase=2;rank=4 bd_20x5 . CDS 70410 70466 . - 0 ID=Thapsdraft895;Parent=Thapsdraft895;rank=3 bd_20x5 . exon 70410 70466 . - . ID=Thapsdraft895.3;Parent=Thapsdraft895;constitutive=1;rank=3 bd_20x5 . CDS 71011 74576 . - 0 ID=Thapsdraft895;Parent=Thapsdraft895;rank=2 bd_20x5 . exon 71011 74576 . - . ID=Thapsdraft895.2;Parent=Thapsdraft895;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . CDS 75038 75075 . - 0 ID=Thapsdraft895;Parent=Thapsdraft895;rank=1 bd_20x5 . repeat_region 78504 78525 . ? . description=trf bd_20x5 . repeat_region 78504 78525 . ? . description=dust bd_20x5 . repeat_region 80029 80052 . ? . description=trf bd_20x5 . repeat_region 80196 80241 . ? . description=trf bd_20x5 . repeat_region 80253 81309 . + . description=TE1_TP bd_20x5 . repeat_region 81164 81203 . ? . description=trf bd_20x5 ensembl protein_coding_gene 75730 79803 . - . ID=Thapsdraft1866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEJ9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_20x5 ensembl transcript 75730 79803 . - . ID=Thapsdraft1866;Parent=Thapsdraft1866;biotype=protein_coding;logic_name=jgi_thaps3 bd_20x5 . CDS 75730 76662 . - 0 ID=Thapsdraft1866;Parent=Thapsdraft1866;rank=7 bd_20x5 . exon 75730 76662 . - . ID=Thapsdraft1866.7;Parent=Thapsdraft1866;constitutive=1;rank=7 bd_20x5 . CDS 76745 77478 . - 0 ID=Thapsdraft1866;Parent=Thapsdraft1866;rank=6 bd_20x5 . exon 76745 77478 . - . ID=Thapsdraft1866.6;Parent=Thapsdraft1866;constitutive=1;ensembl_end_phase=2;rank=6 bd_20x5 . CDS 77584 77677 . - 0 ID=Thapsdraft1866;Parent=Thapsdraft1866;rank=5 bd_20x5 . exon 77584 77677 . - . ID=Thapsdraft1866.5;Parent=Thapsdraft1866;constitutive=1;ensembl_end_phase=1;rank=5 bd_20x5 . CDS 77762 78411 . - 0 ID=Thapsdraft1866;Parent=Thapsdraft1866;rank=4 bd_20x5 . exon 77762 78411 . - . ID=Thapsdraft1866.4;Parent=Thapsdraft1866;constitutive=1;ensembl_end_phase=2;rank=4 bd_20x5 . CDS 78535 78571 . - 0 ID=Thapsdraft1866;Parent=Thapsdraft1866;rank=3 bd_20x5 . exon 78535 78571 . - . ID=Thapsdraft1866.3;Parent=Thapsdraft1866;constitutive=1;ensembl_end_phase=1;rank=3 bd_20x5 . CDS 78685 78704 . - 0 ID=Thapsdraft1866;Parent=Thapsdraft1866;rank=2 bd_20x5 . exon 78685 78704 . - . ID=Thapsdraft1866.2;Parent=Thapsdraft1866;constitutive=1;ensembl_end_phase=2;rank=2 bd_20x5 . CDS 78801 79803 . - 0 ID=Thapsdraft1866;Parent=Thapsdraft1866;rank=1 bd_20x5 . exon 78801 79803 . - . ID=Thapsdraft1866.1;Parent=Thapsdraft1866;constitutive=1;ensembl_end_phase=1;rank=1 bd_20x5 . exon 75038 75075 . - . ID=Thapsdraft895.1;Parent=Thapsdraft895;constitutive=1;ensembl_end_phase=2;rank=1 ##gff-version 3 ##sequence-region bd_13x1 1 100292 bd_13x1 . repeat_region 621 645 . ? . description=trf bd_13x1 . repeat_region 942 960 . ? . description=dust bd_13x1 . repeat_region 942 963 . ? . description=trf bd_13x1 . repeat_region 962 1039 . ? . description=trf bd_13x1 . repeat_region 962 1039 . ? . description=dust bd_13x1 . repeat_region 1125 1159 . ? . description=dust bd_13x1 . repeat_region 1842 2674 . - . description=TE2c_TP bd_13x1 . repeat_region 1885 1943 . ? . description=trf bd_13x1 . repeat_region 2196 2250 . ? . description=trf bd_13x1 . repeat_region 2341 2349 . ? . description=dust bd_13x1 . repeat_region 2642 2680 . - . description=TE2a_TP bd_13x1 . repeat_region 3480 3646 . + . description=Harbinger3_TP bd_13x1 . repeat_region 3659 7555 . + . description=Harbinger3_TP bd_13x1 . repeat_region 3887 3894 . ? . description=dust bd_13x1 . repeat_region 4011 4079 . ? . description=trf bd_13x1 . repeat_region 5469 5549 . ? . description=trf bd_13x1 . repeat_region 5547 5583 . ? . description=trf bd_13x1 . repeat_region 5594 5648 . ? . description=trf bd_13x1 . repeat_region 7553 7616 . + . description=Harbinger3_TP bd_13x1 . repeat_region 7606 7616 . ? . description=dust bd_13x1 . repeat_region 7895 7954 . ? . description=trf bd_13x1 ensembl protein_coding_gene 2951 3329 . - . ID=Thapsdraft1813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEC2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 2951 3329 . - . ID=Thapsdraft1813;Parent=Thapsdraft1813;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 2951 3163 . - 0 ID=Thapsdraft1813;Parent=Thapsdraft1813;rank=2 bd_13x1 . exon 2951 3163 . - . ID=Thapsdraft1813.2;Parent=Thapsdraft1813;constitutive=1;rank=2 bd_13x1 . CDS 3240 3329 . - 0 ID=Thapsdraft1813;Parent=Thapsdraft1813;rank=1 bd_13x1 . exon 3240 3329 . - . ID=Thapsdraft1813.1;Parent=Thapsdraft1813;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 704 1725 . + . ID=Thapsdraft765;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEC1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 704 1725 . + . ID=Thapsdraft765;Parent=Thapsdraft765;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 704 775 . + 0 ID=Thapsdraft765;Parent=Thapsdraft765;rank=1 bd_13x1 . exon 704 775 . + . ID=Thapsdraft765.1;Parent=Thapsdraft765;constitutive=1;rank=1 bd_13x1 . CDS 847 1199 . + 0 ID=Thapsdraft765;Parent=Thapsdraft765;rank=2 bd_13x1 . exon 847 1199 . + . ID=Thapsdraft765.2;Parent=Thapsdraft765;constitutive=1;ensembl_end_phase=2;rank=2 bd_13x1 . CDS 1260 1725 . + 0 ID=Thapsdraft765;Parent=Thapsdraft765;rank=3 bd_13x1 . exon 1260 1725 . + . ID=Thapsdraft765.3;Parent=Thapsdraft765;constitutive=1;ensembl_end_phase=1;rank=3 bd_13x1 . repeat_region 12666 13076 . - . description=TE2_TP bd_13x1 . repeat_region 13076 13443 . - . description=TE2_TP bd_13x1 . biological_region 15251 15254 0.999 + . logic_name=eponine bd_13x1 . repeat_region 18215 18268 . + . description=MuDR1_TP bd_13x1 ensembl protein_coding_gene 14795 15382 . - . ID=Thapsdraft1815;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE96];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 14795 15382 . - . ID=Thapsdraft1815;Parent=Thapsdraft1815;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 14795 15382 . - 0 ID=Thapsdraft1815;Parent=Thapsdraft1815;rank=1 bd_13x1 . exon 14795 15382 . - . ID=Thapsdraft1815.1;Parent=Thapsdraft1815;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 16931 17697 . - . ID=Thapsdraft1816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE97];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 16931 17697 . - . ID=Thapsdraft1816;Parent=Thapsdraft1816;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 16931 17404 . - 0 ID=Thapsdraft1816;Parent=Thapsdraft1816;rank=2 bd_13x1 . exon 16931 17404 . - . ID=Thapsdraft1816.2;Parent=Thapsdraft1816;constitutive=1;rank=2 bd_13x1 . CDS 17584 17697 . - 0 ID=Thapsdraft1816;Parent=Thapsdraft1816;rank=1 bd_13x1 . exon 17584 17697 . - . ID=Thapsdraft1816.1;Parent=Thapsdraft1816;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 11309 12360 . - . ID=Thapsdraft767;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE95];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 11309 12360 . - . ID=Thapsdraft767;Parent=Thapsdraft767;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 11309 11698 . - 0 ID=Thapsdraft767;Parent=Thapsdraft767;rank=2 bd_13x1 . exon 11309 11698 . - . ID=Thapsdraft767.2;Parent=Thapsdraft767;constitutive=1;rank=2 bd_13x1 . CDS 12274 12360 . - 0 ID=Thapsdraft767;Parent=Thapsdraft767;rank=1 bd_13x1 . exon 12274 12360 . - . ID=Thapsdraft767.1;Parent=Thapsdraft767;constitutive=1;rank=1 bd_13x1 . repeat_region 18473 18495 . ? . description=trf bd_13x1 . repeat_region 18555 18777 . + . description=Copia8I_TP bd_13x1 . repeat_region 18770 18854 . ? . description=dust bd_13x1 . repeat_region 18771 18858 . + . description=Harbinger2N_TP bd_13x1 . repeat_region 18783 18858 . ? . description=trf bd_13x1 . repeat_region 18791 18858 . ? . description=trf bd_13x1 . repeat_region 19355 19404 . ? . description=dust bd_13x1 . repeat_region 20291 20530 . - . description=Harbinger4_TP bd_13x1 . repeat_region 20530 21198 . - . description=Harbinger4_TP bd_13x1 ensembl protein_coding_gene 21489 31195 . + . ID=Thapsdraft771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LE98];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 21489 31195 . + . ID=Thapsdraft771;Parent=Thapsdraft771;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 21489 22929 . + 0 ID=Thapsdraft771;Parent=Thapsdraft771;rank=1 bd_13x1 . exon 21489 22929 . + . ID=Thapsdraft771.1;Parent=Thapsdraft771;constitutive=1;ensembl_end_phase=1;rank=1 bd_13x1 . CDS 23280 24847 . + 0 ID=Thapsdraft771;Parent=Thapsdraft771;rank=2 bd_13x1 . exon 23280 24847 . + . ID=Thapsdraft771.2;Parent=Thapsdraft771;constitutive=1;ensembl_end_phase=2;rank=2 bd_13x1 . CDS 24872 24991 . + 0 ID=Thapsdraft771;Parent=Thapsdraft771;rank=3 bd_13x1 . exon 24872 24991 . + . ID=Thapsdraft771.3;Parent=Thapsdraft771;constitutive=1;rank=3 bd_13x1 . CDS 25125 25294 . + 0 ID=Thapsdraft771;Parent=Thapsdraft771;rank=4 bd_13x1 . exon 25125 25294 . + . ID=Thapsdraft771.4;Parent=Thapsdraft771;constitutive=1;ensembl_end_phase=2;rank=4 bd_13x1 . CDS 25332 25429 . + 0 ID=Thapsdraft771;Parent=Thapsdraft771;rank=5 bd_13x1 . exon 25332 25429 . + . ID=Thapsdraft771.5;Parent=Thapsdraft771;constitutive=1;ensembl_end_phase=2;rank=5 bd_13x1 . CDS 25620 26663 . + 0 ID=Thapsdraft771;Parent=Thapsdraft771;rank=6 bd_13x1 . exon 25620 26663 . + . ID=Thapsdraft771.6;Parent=Thapsdraft771;constitutive=1;rank=6 bd_13x1 . CDS 26683 26716 . + 0 ID=Thapsdraft771;Parent=Thapsdraft771;rank=7 bd_13x1 . exon 26683 26716 . + . ID=Thapsdraft771.7;Parent=Thapsdraft771;constitutive=1;ensembl_end_phase=1;rank=7 bd_13x1 . CDS 26941 29873 . + 0 ID=Thapsdraft771;Parent=Thapsdraft771;rank=8 bd_13x1 . exon 26941 29873 . + . ID=Thapsdraft771.8;Parent=Thapsdraft771;constitutive=1;ensembl_end_phase=2;rank=8 bd_13x1 . CDS 29919 31195 . + 0 ID=Thapsdraft771;Parent=Thapsdraft771;rank=9 bd_13x1 ensembl protein_coding_gene 32496 34583 . + . ID=Thapsdraft1515;biotype=protein_coding;description=Adenylosuccinate lyase [Source:UniProtKB/TrEMBL%3BAcc:B8LE99];external_name=ADL;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 32496 34583 . + . ID=Thapsdraft1515;Parent=Thapsdraft1515;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 32496 32587 . + 0 ID=Thapsdraft1515;Parent=Thapsdraft1515;rank=1 bd_13x1 . exon 32496 32587 . + . ID=Thapsdraft1515.1;Parent=Thapsdraft1515;constitutive=1;ensembl_end_phase=2;rank=1 bd_13x1 . CDS 32882 33272 . + 0 ID=Thapsdraft1515;Parent=Thapsdraft1515;rank=2 bd_13x1 . exon 32882 33272 . + . ID=Thapsdraft1515.2;Parent=Thapsdraft1515;constitutive=1;ensembl_end_phase=1;rank=2 bd_13x1 . CDS 33387 33965 . + 0 ID=Thapsdraft1515;Parent=Thapsdraft1515;rank=3 bd_13x1 . exon 33387 33965 . + . ID=Thapsdraft1515.3;Parent=Thapsdraft1515;constitutive=1;rank=3 bd_13x1 . CDS 34044 34179 . + 0 ID=Thapsdraft1515;Parent=Thapsdraft1515;rank=4 bd_13x1 . exon 34044 34179 . + . ID=Thapsdraft1515.4;Parent=Thapsdraft1515;constitutive=1;ensembl_end_phase=1;rank=4 bd_13x1 . CDS 34288 34583 . + 0 ID=Thapsdraft1515;Parent=Thapsdraft1515;rank=5 bd_13x1 . exon 34288 34583 . + . ID=Thapsdraft1515.5;Parent=Thapsdraft1515;constitutive=1;ensembl_end_phase=2;rank=5 bd_13x1 ensembl protein_coding_gene 35162 36290 . - . ID=Thapsdraft1820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 35162 36290 . - . ID=Thapsdraft1820;Parent=Thapsdraft1820;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 35162 35443 . - 0 ID=Thapsdraft1820;Parent=Thapsdraft1820;rank=4 bd_13x1 . exon 35162 35443 . - . ID=Thapsdraft1820.4;Parent=Thapsdraft1820;constitutive=1;rank=4 bd_13x1 . CDS 35544 35779 . - 0 ID=Thapsdraft1820;Parent=Thapsdraft1820;rank=3 bd_13x1 . exon 35544 35779 . - . ID=Thapsdraft1820.3;Parent=Thapsdraft1820;constitutive=1;ensembl_end_phase=2;rank=3 bd_13x1 . CDS 35903 35932 . - 0 ID=Thapsdraft1820;Parent=Thapsdraft1820;rank=2 bd_13x1 . exon 35903 35932 . - . ID=Thapsdraft1820.2;Parent=Thapsdraft1820;constitutive=1;rank=2 bd_13x1 . CDS 36056 36290 . - 0 ID=Thapsdraft1820;Parent=Thapsdraft1820;rank=1 bd_13x1 . exon 36056 36290 . - . ID=Thapsdraft1820.1;Parent=Thapsdraft1820;constitutive=1;ensembl_end_phase=1;rank=1 bd_13x1 . exon 29919 31195 . + . ID=Thapsdraft771.9;Parent=Thapsdraft771;constitutive=1;ensembl_end_phase=2;rank=9 bd_13x1 . repeat_region 39934 39983 . ? . description=dust bd_13x1 . repeat_region 39939 39973 . ? . description=trf bd_13x1 ensembl protein_coding_gene 37486 39178 . + . ID=Thapsdraft1821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA1];external_name=CUE15;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 37486 39178 . + . ID=Thapsdraft1821;Parent=Thapsdraft1821;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 37486 37535 . + 0 ID=Thapsdraft1821;Parent=Thapsdraft1821;rank=1 bd_13x1 . exon 37486 37535 . + . ID=Thapsdraft1821.1;Parent=Thapsdraft1821;constitutive=1;ensembl_end_phase=2;rank=1 bd_13x1 . CDS 37571 38094 . + 0 ID=Thapsdraft1821;Parent=Thapsdraft1821;rank=2 bd_13x1 . exon 37571 38094 . + . ID=Thapsdraft1821.2;Parent=Thapsdraft1821;constitutive=1;ensembl_end_phase=2;rank=2 bd_13x1 . CDS 38375 38743 . + 0 ID=Thapsdraft1821;Parent=Thapsdraft1821;rank=3 bd_13x1 . exon 38375 38743 . + . ID=Thapsdraft1821.3;Parent=Thapsdraft1821;constitutive=1;rank=3 bd_13x1 . CDS 38856 39178 . + 0 ID=Thapsdraft1821;Parent=Thapsdraft1821;rank=4 bd_13x1 . exon 38856 39178 . + . ID=Thapsdraft1821.4;Parent=Thapsdraft1821;constitutive=1;ensembl_end_phase=2;rank=4 bd_13x1 ensembl protein_coding_gene 39972 40934 . + . ID=Thapsdraft1822;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 39972 40934 . + . ID=Thapsdraft1822;Parent=Thapsdraft1822;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 39972 40261 . + 0 ID=Thapsdraft1822;Parent=Thapsdraft1822;rank=1 bd_13x1 . exon 39972 40261 . + . ID=Thapsdraft1822.1;Parent=Thapsdraft1822;constitutive=1;ensembl_end_phase=2;rank=1 bd_13x1 . CDS 40361 40567 . + 0 ID=Thapsdraft1822;Parent=Thapsdraft1822;rank=2 bd_13x1 . exon 40361 40567 . + . ID=Thapsdraft1822.2;Parent=Thapsdraft1822;constitutive=1;rank=2 bd_13x1 . CDS 40657 40750 . + 0 ID=Thapsdraft1822;Parent=Thapsdraft1822;rank=3 bd_13x1 . exon 40657 40750 . + . ID=Thapsdraft1822.3;Parent=Thapsdraft1822;constitutive=1;ensembl_end_phase=1;rank=3 bd_13x1 . CDS 40833 40934 . + 0 ID=Thapsdraft1822;Parent=Thapsdraft1822;rank=4 bd_13x1 . exon 40833 40934 . + . ID=Thapsdraft1822.4;Parent=Thapsdraft1822;constitutive=1;rank=4 bd_13x1 ensembl protein_coding_gene 41565 42374 . - . ID=Thapsdraft1823;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 41565 42374 . - . ID=Thapsdraft1823;Parent=Thapsdraft1823;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 41565 41669 . - 0 ID=Thapsdraft1823;Parent=Thapsdraft1823;rank=2 bd_13x1 . exon 41565 41669 . - . ID=Thapsdraft1823.2;Parent=Thapsdraft1823;constitutive=1;rank=2 bd_13x1 . CDS 41754 42374 . - 0 ID=Thapsdraft1823;Parent=Thapsdraft1823;rank=1 bd_13x1 . exon 41754 42374 . - . ID=Thapsdraft1823.1;Parent=Thapsdraft1823;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 43106 45399 . - . ID=Thapsdraft779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 43106 45399 . - . ID=Thapsdraft779;Parent=Thapsdraft779;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 43106 43212 . - 0 ID=Thapsdraft779;Parent=Thapsdraft779;rank=7 bd_13x1 . exon 43106 43212 . - . ID=Thapsdraft779.7;Parent=Thapsdraft779;constitutive=1;ensembl_end_phase=2;rank=7 bd_13x1 . CDS 43326 43407 . - 0 ID=Thapsdraft779;Parent=Thapsdraft779;rank=6 bd_13x1 . exon 43326 43407 . - . ID=Thapsdraft779.6;Parent=Thapsdraft779;constitutive=1;ensembl_end_phase=1;rank=6 bd_13x1 . CDS 43498 43529 . - 0 ID=Thapsdraft779;Parent=Thapsdraft779;rank=5 bd_13x1 . exon 43498 43529 . - . ID=Thapsdraft779.5;Parent=Thapsdraft779;constitutive=1;ensembl_end_phase=2;rank=5 bd_13x1 . CDS 43625 44071 . - 0 ID=Thapsdraft779;Parent=Thapsdraft779;rank=4 bd_13x1 . exon 43625 44071 . - . ID=Thapsdraft779.4;Parent=Thapsdraft779;constitutive=1;rank=4 bd_13x1 . CDS 44589 44649 . - 0 ID=Thapsdraft779;Parent=Thapsdraft779;rank=3 bd_13x1 . exon 44589 44649 . - . ID=Thapsdraft779.3;Parent=Thapsdraft779;constitutive=1;ensembl_end_phase=1;rank=3 bd_13x1 . CDS 44744 44862 . - 0 ID=Thapsdraft779;Parent=Thapsdraft779;rank=2 bd_13x1 . exon 44744 44862 . - . ID=Thapsdraft779.2;Parent=Thapsdraft779;constitutive=1;ensembl_end_phase=2;rank=2 bd_13x1 . CDS 44958 45399 . - 0 ID=Thapsdraft779;Parent=Thapsdraft779;rank=1 bd_13x1 . exon 44958 45399 . - . ID=Thapsdraft779.1;Parent=Thapsdraft779;constitutive=1;ensembl_end_phase=1;rank=1 bd_13x1 ensembl protein_coding_gene 54277 55299 . + . ID=Thapsdraft1828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 54277 55299 . + . ID=Thapsdraft1828;Parent=Thapsdraft1828;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 54277 54864 . + 0 ID=Thapsdraft1828;Parent=Thapsdraft1828;rank=1 bd_13x1 . exon 54277 54864 . + . ID=Thapsdraft1828.1;Parent=Thapsdraft1828;constitutive=1;rank=1 bd_13x1 . CDS 54980 55138 . + 0 ID=Thapsdraft1828;Parent=Thapsdraft1828;rank=2 bd_13x1 . CDS 55246 55299 . + 0 ID=Thapsdraft1828;Parent=Thapsdraft1828;rank=3 bd_13x1 ensembl protein_coding_gene 51061 51270 . + . ID=Thapsdraft296;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 51061 51270 . + . ID=Thapsdraft296;Parent=Thapsdraft296;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 51061 51270 . + 0 ID=Thapsdraft296;Parent=Thapsdraft296;rank=1 bd_13x1 . exon 51061 51270 . + . ID=Thapsdraft296.1;Parent=Thapsdraft296;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 46347 50797 . + . ID=Thapsdraft780;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 46347 50797 . + . ID=Thapsdraft780;Parent=Thapsdraft780;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 46347 46998 . + 0 ID=Thapsdraft780;Parent=Thapsdraft780;rank=1 bd_13x1 . exon 46347 46998 . + . ID=Thapsdraft780.1;Parent=Thapsdraft780;constitutive=1;ensembl_end_phase=1;rank=1 bd_13x1 . CDS 47101 48206 . + 0 ID=Thapsdraft780;Parent=Thapsdraft780;rank=2 bd_13x1 . exon 47101 48206 . + . ID=Thapsdraft780.2;Parent=Thapsdraft780;constitutive=1;ensembl_end_phase=2;rank=2 bd_13x1 . CDS 48288 48686 . + 0 ID=Thapsdraft780;Parent=Thapsdraft780;rank=3 bd_13x1 . exon 48288 48686 . + . ID=Thapsdraft780.3;Parent=Thapsdraft780;constitutive=1;rank=3 bd_13x1 . CDS 48769 48883 . + 0 ID=Thapsdraft780;Parent=Thapsdraft780;rank=4 bd_13x1 . exon 48769 48883 . + . ID=Thapsdraft780.4;Parent=Thapsdraft780;constitutive=1;ensembl_end_phase=1;rank=4 bd_13x1 . CDS 48987 49182 . + 0 ID=Thapsdraft780;Parent=Thapsdraft780;rank=5 bd_13x1 . exon 48987 49182 . + . ID=Thapsdraft780.5;Parent=Thapsdraft780;constitutive=1;ensembl_end_phase=1;rank=5 bd_13x1 . CDS 49261 49946 . + 0 ID=Thapsdraft780;Parent=Thapsdraft780;rank=6 bd_13x1 . exon 49261 49946 . + . ID=Thapsdraft780.6;Parent=Thapsdraft780;constitutive=1;ensembl_end_phase=2;rank=6 bd_13x1 . CDS 50026 50097 . + 0 ID=Thapsdraft780;Parent=Thapsdraft780;rank=7 bd_13x1 . exon 50026 50097 . + . ID=Thapsdraft780.7;Parent=Thapsdraft780;constitutive=1;rank=7 bd_13x1 . CDS 50183 50248 . + 0 ID=Thapsdraft780;Parent=Thapsdraft780;rank=8 bd_13x1 . exon 50183 50248 . + . ID=Thapsdraft780.8;Parent=Thapsdraft780;constitutive=1;rank=8 bd_13x1 . CDS 50328 50797 . + 0 ID=Thapsdraft780;Parent=Thapsdraft780;rank=9 bd_13x1 . exon 50328 50797 . + . ID=Thapsdraft780.9;Parent=Thapsdraft780;constitutive=1;ensembl_end_phase=2;rank=9 bd_13x1 ensembl protein_coding_gene 53035 53843 . - . ID=Thapsdraft783;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 53035 53843 . - . ID=Thapsdraft783;Parent=Thapsdraft783;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 53035 53059 . - 0 ID=Thapsdraft783;Parent=Thapsdraft783;rank=4 bd_13x1 . exon 53035 53059 . - . ID=Thapsdraft783.4;Parent=Thapsdraft783;constitutive=1;ensembl_end_phase=1;rank=4 bd_13x1 . CDS 53206 53450 . - 0 ID=Thapsdraft783;Parent=Thapsdraft783;rank=3 bd_13x1 . exon 53206 53450 . - . ID=Thapsdraft783.3;Parent=Thapsdraft783;constitutive=1;ensembl_end_phase=2;rank=3 bd_13x1 . CDS 53498 53661 . - 0 ID=Thapsdraft783;Parent=Thapsdraft783;rank=2 bd_13x1 . exon 53498 53661 . - . ID=Thapsdraft783.2;Parent=Thapsdraft783;constitutive=1;ensembl_end_phase=2;rank=2 bd_13x1 . CDS 53717 53843 . - 0 ID=Thapsdraft783;Parent=Thapsdraft783;rank=1 bd_13x1 . exon 53717 53843 . - . ID=Thapsdraft783.1;Parent=Thapsdraft783;constitutive=1;ensembl_end_phase=1;rank=1 bd_13x1 . repeat_region 57950 57969 . ? . description=trf bd_13x1 . repeat_region 58143 58377 . - . description=Copia6LTR_TP bd_13x1 . repeat_region 58378 59574 . - . description=Copia6I_TP bd_13x1 . repeat_region 59575 64606 . ? . description=dust bd_13x1 ensembl protein_coding_gene 55372 56202 . + . ID=Thapsdraft1709;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEA9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 55372 56202 . + . ID=Thapsdraft1709;Parent=Thapsdraft1709;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 55372 55793 . + 0 ID=Thapsdraft1709;Parent=Thapsdraft1709;rank=1 bd_13x1 . exon 55372 55793 . + . ID=Thapsdraft1709.1;Parent=Thapsdraft1709;constitutive=1;ensembl_end_phase=2;rank=1 bd_13x1 . CDS 55857 56202 . + 0 ID=Thapsdraft1709;Parent=Thapsdraft1709;rank=2 bd_13x1 . exon 55857 56202 . + . ID=Thapsdraft1709.2;Parent=Thapsdraft1709;constitutive=1;ensembl_end_phase=1;rank=2 bd_13x1 . exon 54980 55138 . + . ID=Thapsdraft1828.2;Parent=Thapsdraft1828;constitutive=1;rank=2 bd_13x1 . exon 55246 55299 . + . ID=Thapsdraft1828.3;Parent=Thapsdraft1828;constitutive=1;rank=3 bd_13x1 ensembl protein_coding_gene 57009 57854 . - . ID=Thapsdraft787;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEB0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 57009 57854 . - . ID=Thapsdraft787;Parent=Thapsdraft787;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 57009 57284 . - 0 ID=Thapsdraft787;Parent=Thapsdraft787;rank=2 bd_13x1 . exon 57009 57284 . - . ID=Thapsdraft787.2;Parent=Thapsdraft787;constitutive=1;rank=2 bd_13x1 . CDS 57456 57854 . - 0 ID=Thapsdraft787;Parent=Thapsdraft787;rank=1 bd_13x1 . exon 57456 57854 . - . ID=Thapsdraft787.1;Parent=Thapsdraft787;constitutive=1;rank=1 bd_13x1 ensembl gene 58553 58960 . - . ID=Thapsdraft788;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 58553 58960 . - . ID=Thapsdraft788;Parent=Thapsdraft788;biotype=nontranslating_CDS;logic_name=jgi_thaps3 bd_13x1 . exon 58553 58960 . - . ID=Thapsdraft788.1;Parent=Thapsdraft788;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 68257 70237 . + . ID=Thapsdraft1193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEB3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 68257 70237 . + . ID=Thapsdraft1193;Parent=Thapsdraft1193;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 68257 68757 . + 0 ID=Thapsdraft1193;Parent=Thapsdraft1193;rank=1 bd_13x1 . exon 68257 68757 . + . ID=Thapsdraft1193.1;Parent=Thapsdraft1193;constitutive=1;rank=1 bd_13x1 . CDS 68827 69129 . + 0 ID=Thapsdraft1193;Parent=Thapsdraft1193;rank=2 bd_13x1 . exon 68827 69129 . + . ID=Thapsdraft1193.2;Parent=Thapsdraft1193;constitutive=1;rank=2 bd_13x1 . CDS 69283 69706 . + 0 ID=Thapsdraft1193;Parent=Thapsdraft1193;rank=3 bd_13x1 . exon 69283 69706 . + . ID=Thapsdraft1193.3;Parent=Thapsdraft1193;constitutive=1;ensembl_end_phase=1;rank=3 bd_13x1 . CDS 70002 70237 . + 0 ID=Thapsdraft1193;Parent=Thapsdraft1193;rank=4 bd_13x1 . exon 70002 70237 . + . ID=Thapsdraft1193.4;Parent=Thapsdraft1193;constitutive=1;ensembl_end_phase=2;rank=4 bd_13x1 ensembl protein_coding_gene 64988 66106 . + . ID=Thapsdraft789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEB1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 64988 66106 . + . ID=Thapsdraft789;Parent=Thapsdraft789;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 64988 66106 . + 0 ID=Thapsdraft789;Parent=Thapsdraft789;rank=1 bd_13x1 . exon 64988 66106 . + . ID=Thapsdraft789.1;Parent=Thapsdraft789;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 66292 67763 . + . ID=Thapsdraft790;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LEB2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 66292 67763 . + . ID=Thapsdraft790;Parent=Thapsdraft790;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 66292 67003 . + 0 ID=Thapsdraft790;Parent=Thapsdraft790;rank=1 bd_13x1 . exon 66292 67003 . + . ID=Thapsdraft790.1;Parent=Thapsdraft790;constitutive=1;ensembl_end_phase=1;rank=1 bd_13x1 . CDS 67084 67337 . + 0 ID=Thapsdraft790;Parent=Thapsdraft790;rank=2 bd_13x1 . exon 67084 67337 . + . ID=Thapsdraft790.2;Parent=Thapsdraft790;constitutive=1;ensembl_end_phase=2;rank=2 bd_13x1 . CDS 67404 67763 . + 0 ID=Thapsdraft790;Parent=Thapsdraft790;rank=3 bd_13x1 . exon 67404 67763 . + . ID=Thapsdraft790.3;Parent=Thapsdraft790;constitutive=1;rank=3 bd_13x1 ensembl protein_coding_gene 70353 71276 . - . ID=Thapsdraft793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEB4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 70353 71276 . - . ID=Thapsdraft793;Parent=Thapsdraft793;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 70353 71276 . - 0 ID=Thapsdraft793;Parent=Thapsdraft793;rank=1 bd_13x1 . exon 70353 71276 . - . ID=Thapsdraft793.1;Parent=Thapsdraft793;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 72813 73115 . + . ID=Thapsdraft794;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEB5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 72813 73115 . + . ID=Thapsdraft794;Parent=Thapsdraft794;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 72813 73115 . + 0 ID=Thapsdraft794;Parent=Thapsdraft794;rank=1 bd_13x1 . exon 72813 73115 . + . ID=Thapsdraft794.1;Parent=Thapsdraft794;constitutive=1;rank=1 bd_13x1 . repeat_region 77921 77929 . ? . description=dust bd_13x1 . repeat_region 78381 78411 . ? . description=trf bd_13x1 . repeat_region 81320 81327 . ? . description=dust bd_13x1 ensembl protein_coding_gene 81331 82306 . - . ID=Thapsdraft1182;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEC0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 81331 82306 . - . ID=Thapsdraft1182;Parent=Thapsdraft1182;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 81331 82071 . - 0 ID=Thapsdraft1182;Parent=Thapsdraft1182;rank=2 bd_13x1 . exon 81331 82071 . - . ID=Thapsdraft1182.2;Parent=Thapsdraft1182;constitutive=1;rank=2 bd_13x1 . CDS 82181 82306 . - 0 ID=Thapsdraft1182;Parent=Thapsdraft1182;rank=1 bd_13x1 ensembl protein_coding_gene 73269 74207 . + . ID=Thapsdraft1192;biotype=protein_coding;description=Acyl-[acyl-carrier-protein] desaturase [Source:UniProtKB/TrEMBL%3BAcc:B8LEB6];external_name=DES7;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 73269 74207 . + . ID=Thapsdraft1192;Parent=Thapsdraft1192;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 73269 74207 . + 0 ID=Thapsdraft1192;Parent=Thapsdraft1192;rank=1 bd_13x1 . exon 73269 74207 . + . ID=Thapsdraft1192.1;Parent=Thapsdraft1192;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 75225 77249 . + . ID=Thapsdraft1658;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEB7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 75225 77249 . + . ID=Thapsdraft1658;Parent=Thapsdraft1658;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 75225 75983 . + 0 ID=Thapsdraft1658;Parent=Thapsdraft1658;rank=1 bd_13x1 . exon 75225 75983 . + . ID=Thapsdraft1658.1;Parent=Thapsdraft1658;constitutive=1;rank=1 bd_13x1 . CDS 76193 76550 . + 0 ID=Thapsdraft1658;Parent=Thapsdraft1658;rank=2 bd_13x1 . exon 76193 76550 . + . ID=Thapsdraft1658.2;Parent=Thapsdraft1658;constitutive=1;ensembl_end_phase=1;rank=2 bd_13x1 . CDS 76711 77249 . + 0 ID=Thapsdraft1658;Parent=Thapsdraft1658;rank=3 bd_13x1 . exon 76711 77249 . + . ID=Thapsdraft1658.3;Parent=Thapsdraft1658;constitutive=1;ensembl_end_phase=2;rank=3 bd_13x1 ensembl protein_coding_gene 78336 79280 . + . ID=Thapsdraft1835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEB8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 78336 79280 . + . ID=Thapsdraft1835;Parent=Thapsdraft1835;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 78336 79280 . + 0 ID=Thapsdraft1835;Parent=Thapsdraft1835;rank=1 bd_13x1 . exon 78336 79280 . + . ID=Thapsdraft1835.1;Parent=Thapsdraft1835;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 79486 81171 . + . ID=Thapsdraft799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEB9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 79486 81171 . + . ID=Thapsdraft799;Parent=Thapsdraft799;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 79486 80376 . + 0 ID=Thapsdraft799;Parent=Thapsdraft799;rank=1 bd_13x1 . exon 79486 80376 . + . ID=Thapsdraft799.1;Parent=Thapsdraft799;constitutive=1;rank=1 bd_13x1 . CDS 80459 80659 . + 0 ID=Thapsdraft799;Parent=Thapsdraft799;rank=2 bd_13x1 . exon 80459 80659 . + . ID=Thapsdraft799.2;Parent=Thapsdraft799;constitutive=1;rank=2 bd_13x1 . CDS 80760 80806 . + 0 ID=Thapsdraft799;Parent=Thapsdraft799;rank=3 bd_13x1 . exon 80760 80806 . + . ID=Thapsdraft799.3;Parent=Thapsdraft799;constitutive=1;ensembl_end_phase=2;rank=3 bd_13x1 . CDS 80898 81171 . + 0 ID=Thapsdraft799;Parent=Thapsdraft799;rank=4 bd_13x1 . exon 80898 81171 . + . ID=Thapsdraft799.4;Parent=Thapsdraft799;constitutive=1;ensembl_end_phase=1;rank=4 bd_13x1 . exon 82181 82306 . - . ID=Thapsdraft1182.1;Parent=Thapsdraft1182;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 82647 84311 . + . ID=Thapsdraft1659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEC8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 82647 84311 . + . ID=Thapsdraft1659;Parent=Thapsdraft1659;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 82647 83576 . + 0 ID=Thapsdraft1659;Parent=Thapsdraft1659;rank=1 bd_13x1 . exon 82647 83576 . + . ID=Thapsdraft1659.1;Parent=Thapsdraft1659;constitutive=1;rank=1 bd_13x1 . CDS 83663 83866 . + 0 ID=Thapsdraft1659;Parent=Thapsdraft1659;rank=2 bd_13x1 . exon 83663 83866 . + . ID=Thapsdraft1659.2;Parent=Thapsdraft1659;constitutive=1;rank=2 bd_13x1 . CDS 83952 84311 . + 0 ID=Thapsdraft1659;Parent=Thapsdraft1659;rank=3 bd_13x1 . exon 83952 84311 . + . ID=Thapsdraft1659.3;Parent=Thapsdraft1659;constitutive=1;rank=3 bd_13x1 ensembl protein_coding_gene 89108 89989 . - . ID=Thapsdraft168;biotype=protein_coding;description=Phospholipase [Source:UniProtKB/TrEMBL%3BAcc:B8LEC4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 89108 89989 . - . ID=Thapsdraft168;Parent=Thapsdraft168;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 89108 89412 . - 0 ID=Thapsdraft168;Parent=Thapsdraft168;rank=3 bd_13x1 . exon 89108 89412 . - . ID=Thapsdraft168.3;Parent=Thapsdraft168;constitutive=1;ensembl_end_phase=2;rank=3 bd_13x1 . CDS 89455 89734 . - 0 ID=Thapsdraft168;Parent=Thapsdraft168;rank=2 bd_13x1 . exon 89455 89734 . - . ID=Thapsdraft168.2;Parent=Thapsdraft168;constitutive=1;ensembl_end_phase=1;rank=2 bd_13x1 . CDS 89921 89989 . - 0 ID=Thapsdraft168;Parent=Thapsdraft168;rank=1 bd_13x1 . exon 89921 89989 . - . ID=Thapsdraft168.1;Parent=Thapsdraft168;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 87631 89037 . + . ID=Thapsdraft1837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEC3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 87631 89037 . + . ID=Thapsdraft1837;Parent=Thapsdraft1837;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 87631 89037 . + 0 ID=Thapsdraft1837;Parent=Thapsdraft1837;rank=1 bd_13x1 . exon 87631 89037 . + . ID=Thapsdraft1837.1;Parent=Thapsdraft1837;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 84479 85403 . - . ID=Thapsdraft803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEC9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 84479 85403 . - . ID=Thapsdraft803;Parent=Thapsdraft803;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 84479 85248 . - 0 ID=Thapsdraft803;Parent=Thapsdraft803;rank=2 bd_13x1 . exon 84479 85248 . - . ID=Thapsdraft803.2;Parent=Thapsdraft803;constitutive=1;ensembl_end_phase=2;rank=2 bd_13x1 . CDS 85325 85403 . - 0 ID=Thapsdraft803;Parent=Thapsdraft803;rank=1 bd_13x1 . exon 85325 85403 . - . ID=Thapsdraft803.1;Parent=Thapsdraft803;constitutive=1;ensembl_end_phase=1;rank=1 bd_13x1 ensembl protein_coding_gene 85663 86538 . + . ID=Thapsdraft804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LED0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 85663 86538 . + . ID=Thapsdraft804;Parent=Thapsdraft804;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 85663 86538 . + 0 ID=Thapsdraft804;Parent=Thapsdraft804;rank=1 bd_13x1 . exon 85663 86538 . + . ID=Thapsdraft804.1;Parent=Thapsdraft804;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 90727 91986 . - . ID=Thapsdraft807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEC5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 90727 91986 . - . ID=Thapsdraft807;Parent=Thapsdraft807;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 90727 91986 . - 0 ID=Thapsdraft807;Parent=Thapsdraft807;rank=1 bd_13x1 . exon 90727 91986 . - . ID=Thapsdraft807.1;Parent=Thapsdraft807;constitutive=1;rank=1 bd_13x1 . repeat_region 94723 94934 . + . description=Harbinger1_TP bd_13x1 . repeat_region 94895 94938 . ? . description=trf bd_13x1 . repeat_region 100176 100183 . ? . description=dust bd_13x1 ensembl protein_coding_gene 93626 94480 . - . ID=Thapsdraft808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEC6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 93626 94480 . - . ID=Thapsdraft808;Parent=Thapsdraft808;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 93626 94480 . - 0 ID=Thapsdraft808;Parent=Thapsdraft808;rank=1 bd_13x1 . exon 93626 94480 . - . ID=Thapsdraft808.1;Parent=Thapsdraft808;constitutive=1;rank=1 bd_13x1 ensembl protein_coding_gene 97644 100135 . - . ID=Thapsdraft810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEC7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_13x1 ensembl transcript 97644 100135 . - . ID=Thapsdraft810;Parent=Thapsdraft810;biotype=protein_coding;logic_name=jgi_thaps3 bd_13x1 . CDS 97644 98289 . - 0 ID=Thapsdraft810;Parent=Thapsdraft810;rank=3 bd_13x1 . exon 97644 98289 . - . ID=Thapsdraft810.3;Parent=Thapsdraft810;constitutive=1;ensembl_end_phase=1;rank=3 bd_13x1 . CDS 98464 98819 . - 0 ID=Thapsdraft810;Parent=Thapsdraft810;rank=2 bd_13x1 . exon 98464 98819 . - . ID=Thapsdraft810.2;Parent=Thapsdraft810;constitutive=1;ensembl_end_phase=2;rank=2 bd_13x1 . CDS 98855 100135 . - 0 ID=Thapsdraft810;Parent=Thapsdraft810;rank=1 bd_13x1 . exon 98855 100135 . - . ID=Thapsdraft810.1;Parent=Thapsdraft810;constitutive=1;rank=1 ##gff-version 3 ##sequence-region bd_23x33 1 138550 bd_23x33 . repeat_region 3722 13819 . ? . description=dust bd_23x33 ensembl protein_coding_gene 78 1858 . - . ID=Thapsdraft906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 78 1858 . - . ID=Thapsdraft906;Parent=Thapsdraft906;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 78 625 . - 0 ID=Thapsdraft906;Parent=Thapsdraft906;rank=5 bd_23x33 . exon 78 625 . - . ID=Thapsdraft906.5;Parent=Thapsdraft906;constitutive=1;ensembl_end_phase=2;rank=5 bd_23x33 . CDS 732 867 . - 0 ID=Thapsdraft906;Parent=Thapsdraft906;rank=4 bd_23x33 . exon 732 867 . - . ID=Thapsdraft906.4;Parent=Thapsdraft906;constitutive=1;ensembl_end_phase=1;rank=4 bd_23x33 . CDS 958 1396 . - 0 ID=Thapsdraft906;Parent=Thapsdraft906;rank=3 bd_23x33 . exon 958 1396 . - . ID=Thapsdraft906.3;Parent=Thapsdraft906;constitutive=1;ensembl_end_phase=1;rank=3 bd_23x33 . CDS 1441 1512 . - 0 ID=Thapsdraft906;Parent=Thapsdraft906;rank=2 bd_23x33 . exon 1441 1512 . - . ID=Thapsdraft906.2;Parent=Thapsdraft906;constitutive=1;rank=2 bd_23x33 . CDS 1603 1858 . - 0 ID=Thapsdraft906;Parent=Thapsdraft906;rank=1 bd_23x33 . exon 1603 1858 . - . ID=Thapsdraft906.1;Parent=Thapsdraft906;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 . repeat_region 25689 25696 . ? . description=dust bd_23x33 . repeat_region 26993 27017 . ? . description=trf bd_23x33 ensembl protein_coding_gene 25554 27194 . - . ID=Thapsdraft1875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 25554 27194 . - . ID=Thapsdraft1875;Parent=Thapsdraft1875;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 25554 27194 . - 0 ID=Thapsdraft1875;Parent=Thapsdraft1875;rank=1 bd_23x33 . exon 25554 27194 . - . ID=Thapsdraft1875.1;Parent=Thapsdraft1875;constitutive=1;rank=1 bd_23x33 ensembl protein_coding_gene 27480 31469 . + . ID=Thapsdraft1876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 27480 31469 . + . ID=Thapsdraft1876;Parent=Thapsdraft1876;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 27480 31469 . + 0 ID=Thapsdraft1876;Parent=Thapsdraft1876;rank=1 bd_23x33 . exon 27480 31469 . + . ID=Thapsdraft1876.1;Parent=Thapsdraft1876;constitutive=1;rank=1 bd_23x33 ensembl protein_coding_gene 20546 21922 . + . ID=Thapsdraft908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEP0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 20546 21922 . + . ID=Thapsdraft908;Parent=Thapsdraft908;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 20546 21922 . + 0 ID=Thapsdraft908;Parent=Thapsdraft908;rank=1 bd_23x33 . exon 20546 21922 . + . ID=Thapsdraft908.1;Parent=Thapsdraft908;constitutive=1;rank=1 bd_23x33 ensembl protein_coding_gene 22423 23258 . + . ID=Thapsdraft909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 22423 23258 . + . ID=Thapsdraft909;Parent=Thapsdraft909;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 22423 23258 . + 0 ID=Thapsdraft909;Parent=Thapsdraft909;rank=1 bd_23x33 . exon 22423 23258 . + . ID=Thapsdraft909.1;Parent=Thapsdraft909;constitutive=1;ensembl_end_phase=2;rank=1 bd_23x33 ensembl protein_coding_gene 23396 24802 . + . ID=Thapsdraft911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 23396 24802 . + . ID=Thapsdraft911;Parent=Thapsdraft911;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 23396 23414 . + 0 ID=Thapsdraft911;Parent=Thapsdraft911;rank=1 bd_23x33 . exon 23396 23414 . + . ID=Thapsdraft911.1;Parent=Thapsdraft911;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 . CDS 23561 23730 . + 0 ID=Thapsdraft911;Parent=Thapsdraft911;rank=2 bd_23x33 . exon 23561 23730 . + . ID=Thapsdraft911.2;Parent=Thapsdraft911;constitutive=1;ensembl_end_phase=2;rank=2 bd_23x33 . CDS 23806 24012 . + 0 ID=Thapsdraft911;Parent=Thapsdraft911;rank=3 bd_23x33 . exon 23806 24012 . + . ID=Thapsdraft911.3;Parent=Thapsdraft911;constitutive=1;rank=3 bd_23x33 . CDS 24112 24678 . + 0 ID=Thapsdraft911;Parent=Thapsdraft911;rank=4 bd_23x33 . exon 24112 24678 . + . ID=Thapsdraft911.4;Parent=Thapsdraft911;constitutive=1;rank=4 bd_23x33 . CDS 24716 24802 . + 0 ID=Thapsdraft911;Parent=Thapsdraft911;rank=5 bd_23x33 . exon 24716 24802 . + . ID=Thapsdraft911.5;Parent=Thapsdraft911;constitutive=1;rank=5 bd_23x33 ensembl protein_coding_gene 31850 32691 . + . ID=Thapsdraft1877;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 31850 32691 . + . ID=Thapsdraft1877;Parent=Thapsdraft1877;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 31850 31898 . + 0 ID=Thapsdraft1877;Parent=Thapsdraft1877;rank=1 bd_23x33 . exon 31850 31898 . + . ID=Thapsdraft1877.1;Parent=Thapsdraft1877;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 . CDS 31981 32204 . + 0 ID=Thapsdraft1877;Parent=Thapsdraft1877;rank=2 bd_23x33 . exon 31981 32204 . + . ID=Thapsdraft1877.2;Parent=Thapsdraft1877;constitutive=1;ensembl_end_phase=2;rank=2 bd_23x33 . CDS 32254 32691 . + 0 ID=Thapsdraft1877;Parent=Thapsdraft1877;rank=3 bd_23x33 . exon 32254 32691 . + . ID=Thapsdraft1877.3;Parent=Thapsdraft1877;constitutive=1;rank=3 bd_23x33 ensembl protein_coding_gene 32943 38064 . - . ID=Thapsdraft1878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 32943 38064 . - . ID=Thapsdraft1878;Parent=Thapsdraft1878;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 32943 35319 . - 0 ID=Thapsdraft1878;Parent=Thapsdraft1878;rank=4 bd_23x33 . exon 32943 35319 . - . ID=Thapsdraft1878.4;Parent=Thapsdraft1878;constitutive=1;ensembl_end_phase=1;rank=4 bd_23x33 . CDS 35593 35929 . - 0 ID=Thapsdraft1878;Parent=Thapsdraft1878;rank=3 bd_23x33 . exon 35593 35929 . - . ID=Thapsdraft1878.3;Parent=Thapsdraft1878;constitutive=1;ensembl_end_phase=1;rank=3 bd_23x33 . CDS 35967 36689 . - 0 ID=Thapsdraft1878;Parent=Thapsdraft1878;rank=2 bd_23x33 . exon 35967 36689 . - . ID=Thapsdraft1878.2;Parent=Thapsdraft1878;constitutive=1;rank=2 bd_23x33 . CDS 36825 38064 . - 0 ID=Thapsdraft1878;Parent=Thapsdraft1878;rank=1 bd_23x33 . exon 36825 38064 . - . ID=Thapsdraft1878.1;Parent=Thapsdraft1878;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 ensembl protein_coding_gene 39244 49066 . - . ID=Thapsdraft1879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 39244 49066 . - . ID=Thapsdraft1879;Parent=Thapsdraft1879;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 39244 40703 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=15 bd_23x33 . exon 39244 40703 . - . ID=Thapsdraft1879.15;Parent=Thapsdraft1879;constitutive=1;ensembl_end_phase=2;rank=15 bd_23x33 . CDS 40753 40865 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=14 bd_23x33 . CDS 40959 41599 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=13 bd_23x33 . CDS 41834 42832 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=12 bd_23x33 . CDS 42917 42983 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=11 bd_23x33 . CDS 43063 43149 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=10 bd_23x33 . CDS 43235 43336 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=9 bd_23x33 . CDS 43429 44426 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=8 bd_23x33 . CDS 44474 44521 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=7 bd_23x33 . CDS 45330 47597 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=6 bd_23x33 . CDS 47676 47742 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=5 bd_23x33 . CDS 47825 47846 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=4 bd_23x33 . CDS 47938 48002 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=3 bd_23x33 . CDS 48083 48912 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=2 bd_23x33 . CDS 48995 49066 . - 0 ID=Thapsdraft1879;Parent=Thapsdraft1879;rank=1 bd_23x33 . repeat_region 40438 40756 . ? . description=trf bd_23x33 . repeat_region 40630 40663 . ? . description=trf bd_23x33 . repeat_region 41634 41656 . ? . description=dust bd_23x33 . repeat_region 41637 41656 . ? . description=trf bd_23x33 . exon 40753 40865 . - . ID=Thapsdraft1879.14;Parent=Thapsdraft1879;constitutive=1;ensembl_end_phase=2;rank=14 bd_23x33 . exon 40959 41599 . - . ID=Thapsdraft1879.13;Parent=Thapsdraft1879;constitutive=1;ensembl_end_phase=2;rank=13 bd_23x33 . exon 41834 42832 . - . ID=Thapsdraft1879.12;Parent=Thapsdraft1879;constitutive=1;rank=12 bd_23x33 . exon 42917 42983 . - . ID=Thapsdraft1879.11;Parent=Thapsdraft1879;constitutive=1;ensembl_end_phase=1;rank=11 bd_23x33 . exon 43063 43149 . - . ID=Thapsdraft1879.10;Parent=Thapsdraft1879;constitutive=1;rank=10 bd_23x33 . exon 43235 43336 . - . ID=Thapsdraft1879.9;Parent=Thapsdraft1879;constitutive=1;rank=9 bd_23x33 . exon 43429 44426 . - . ID=Thapsdraft1879.8;Parent=Thapsdraft1879;constitutive=1;ensembl_end_phase=2;rank=8 bd_23x33 . exon 44474 44521 . - . ID=Thapsdraft1879.7;Parent=Thapsdraft1879;constitutive=1;rank=7 bd_23x33 . exon 45330 47597 . - . ID=Thapsdraft1879.6;Parent=Thapsdraft1879;constitutive=1;rank=6 bd_23x33 . exon 47676 47742 . - . ID=Thapsdraft1879.5;Parent=Thapsdraft1879;constitutive=1;ensembl_end_phase=1;rank=5 bd_23x33 . exon 47825 47846 . - . ID=Thapsdraft1879.4;Parent=Thapsdraft1879;constitutive=1;ensembl_end_phase=1;rank=4 bd_23x33 . exon 47938 48002 . - . ID=Thapsdraft1879.3;Parent=Thapsdraft1879;constitutive=1;ensembl_end_phase=2;rank=3 bd_23x33 . exon 48083 48912 . - . ID=Thapsdraft1879.2;Parent=Thapsdraft1879;constitutive=1;ensembl_end_phase=2;rank=2 bd_23x33 . exon 48995 49066 . - . ID=Thapsdraft1879.1;Parent=Thapsdraft1879;constitutive=1;rank=1 bd_23x33 ensembl protein_coding_gene 55637 57802 . + . ID=Thapsdraft1880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 55637 57802 . + . ID=Thapsdraft1880;Parent=Thapsdraft1880;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 55637 56180 . + 0 ID=Thapsdraft1880;Parent=Thapsdraft1880;rank=1 bd_23x33 . exon 55637 56180 . + . ID=Thapsdraft1880.1;Parent=Thapsdraft1880;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 . CDS 56330 56410 . + 0 ID=Thapsdraft1880;Parent=Thapsdraft1880;rank=2 bd_23x33 . exon 56330 56410 . + . ID=Thapsdraft1880.2;Parent=Thapsdraft1880;constitutive=1;rank=2 bd_23x33 . CDS 56558 56941 . + 0 ID=Thapsdraft1880;Parent=Thapsdraft1880;rank=3 bd_23x33 . exon 56558 56941 . + . ID=Thapsdraft1880.3;Parent=Thapsdraft1880;constitutive=1;rank=3 bd_23x33 . CDS 57036 57802 . + 0 ID=Thapsdraft1880;Parent=Thapsdraft1880;rank=4 bd_23x33 . exon 57036 57802 . + . ID=Thapsdraft1880.4;Parent=Thapsdraft1880;constitutive=1;ensembl_end_phase=2;rank=4 bd_23x33 ensembl protein_coding_gene 50427 50771 . - . ID=Thapsdraft917;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 50427 50771 . - . ID=Thapsdraft917;Parent=Thapsdraft917;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 50427 50771 . - 0 ID=Thapsdraft917;Parent=Thapsdraft917;rank=1 bd_23x33 . exon 50427 50771 . - . ID=Thapsdraft917.1;Parent=Thapsdraft917;constitutive=1;rank=1 bd_23x33 . repeat_region 62651 62670 . ? . description=trf bd_23x33 . repeat_region 62651 62729 . ? . description=dust bd_23x33 . repeat_region 62670 62729 . ? . description=trf bd_23x33 . repeat_region 64154 64193 . ? . description=trf bd_23x33 . repeat_region 64154 64193 . ? . description=trf bd_23x33 ensembl protein_coding_gene 59842 61337 . - . ID=Thapsdraft137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 59842 61337 . - . ID=Thapsdraft137;Parent=Thapsdraft137;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 59842 59930 . - 0 ID=Thapsdraft137;Parent=Thapsdraft137;rank=4 bd_23x33 . exon 59842 59930 . - . ID=Thapsdraft137.4;Parent=Thapsdraft137;constitutive=1;ensembl_end_phase=2;rank=4 bd_23x33 . CDS 60020 60584 . - 0 ID=Thapsdraft137;Parent=Thapsdraft137;rank=3 bd_23x33 . exon 60020 60584 . - . ID=Thapsdraft137.3;Parent=Thapsdraft137;constitutive=1;ensembl_end_phase=1;rank=3 bd_23x33 . CDS 60792 60883 . - 0 ID=Thapsdraft137;Parent=Thapsdraft137;rank=2 bd_23x33 . exon 60792 60883 . - . ID=Thapsdraft137.2;Parent=Thapsdraft137;constitutive=1;ensembl_end_phase=2;rank=2 bd_23x33 . CDS 61205 61337 . - 0 ID=Thapsdraft137;Parent=Thapsdraft137;rank=1 bd_23x33 . exon 61205 61337 . - . ID=Thapsdraft137.1;Parent=Thapsdraft137;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 ensembl gene 66097 71174 . + . ID=Thapsdraft457;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 66097 71174 . + . ID=Thapsdraft457;Parent=Thapsdraft457;biotype=nontranslating_CDS;logic_name=jgi_thaps3 bd_23x33 . exon 66097 67283 . + . ID=Thapsdraft457.1;Parent=Thapsdraft457;constitutive=1;ensembl_end_phase=2;rank=1 bd_23x33 . exon 68889 69209 . + . ID=Thapsdraft457.2;Parent=Thapsdraft457;constitutive=1;rank=2 bd_23x33 ensembl protein_coding_gene 61841 63417 . + . ID=Thapsdraft922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEM9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 61841 63417 . + . ID=Thapsdraft922;Parent=Thapsdraft922;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 61841 62302 . + 0 ID=Thapsdraft922;Parent=Thapsdraft922;rank=1 bd_23x33 . exon 61841 62302 . + . ID=Thapsdraft922.1;Parent=Thapsdraft922;constitutive=1;rank=1 bd_23x33 . CDS 62428 63417 . + 0 ID=Thapsdraft922;Parent=Thapsdraft922;rank=2 bd_23x33 . exon 62428 63417 . + . ID=Thapsdraft922.2;Parent=Thapsdraft922;constitutive=1;rank=2 bd_23x33 ensembl protein_coding_gene 64516 65438 . - . ID=Thapsdraft923;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 64516 65438 . - . ID=Thapsdraft923;Parent=Thapsdraft923;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 64516 64654 . - 0 ID=Thapsdraft923;Parent=Thapsdraft923;rank=2 bd_23x33 . exon 64516 64654 . - . ID=Thapsdraft923.2;Parent=Thapsdraft923;constitutive=1;ensembl_end_phase=1;rank=2 bd_23x33 . CDS 64717 65438 . - 0 ID=Thapsdraft923;Parent=Thapsdraft923;rank=1 bd_23x33 . exon 64717 65438 . - . ID=Thapsdraft923.1;Parent=Thapsdraft923;constitutive=1;ensembl_end_phase=2;rank=1 bd_23x33 ensembl protein_coding_gene 73745 76983 . - . ID=Thapsdraft1542;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 73745 76983 . - . ID=Thapsdraft1542;Parent=Thapsdraft1542;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 73745 75610 . - 0 ID=Thapsdraft1542;Parent=Thapsdraft1542;rank=3 bd_23x33 . exon 73745 75610 . - . ID=Thapsdraft1542.3;Parent=Thapsdraft1542;constitutive=1;rank=3 bd_23x33 . CDS 75728 76011 . - 0 ID=Thapsdraft1542;Parent=Thapsdraft1542;rank=2 bd_23x33 . exon 75728 76011 . - . ID=Thapsdraft1542.2;Parent=Thapsdraft1542;constitutive=1;ensembl_end_phase=2;rank=2 bd_23x33 . CDS 76143 76983 . - 0 ID=Thapsdraft1542;Parent=Thapsdraft1542;rank=1 bd_23x33 . exon 76143 76983 . - . ID=Thapsdraft1542.1;Parent=Thapsdraft1542;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 ensembl protein_coding_gene 77266 79255 . - . ID=Thapsdraft1882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 77266 79255 . - . ID=Thapsdraft1882;Parent=Thapsdraft1882;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 77266 77477 . - 0 ID=Thapsdraft1882;Parent=Thapsdraft1882;rank=5 bd_23x33 . exon 77266 77477 . - . ID=Thapsdraft1882.5;Parent=Thapsdraft1882;constitutive=1;ensembl_end_phase=2;rank=5 bd_23x33 . CDS 77511 77676 . - 0 ID=Thapsdraft1882;Parent=Thapsdraft1882;rank=4 bd_23x33 . exon 77511 77676 . - . ID=Thapsdraft1882.4;Parent=Thapsdraft1882;constitutive=1;ensembl_end_phase=1;rank=4 bd_23x33 . CDS 77725 78023 . - 0 ID=Thapsdraft1882;Parent=Thapsdraft1882;rank=3 bd_23x33 . exon 77725 78023 . - . ID=Thapsdraft1882.3;Parent=Thapsdraft1882;constitutive=1;ensembl_end_phase=2;rank=3 bd_23x33 . CDS 78113 78496 . - 0 ID=Thapsdraft1882;Parent=Thapsdraft1882;rank=2 bd_23x33 . exon 78113 78496 . - . ID=Thapsdraft1882.2;Parent=Thapsdraft1882;constitutive=1;rank=2 bd_23x33 . CDS 78604 79255 . - 0 ID=Thapsdraft1882;Parent=Thapsdraft1882;rank=1 bd_23x33 . exon 78604 79255 . - . ID=Thapsdraft1882.1;Parent=Thapsdraft1882;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 . exon 69292 69322 . + . ID=Thapsdraft457.3;Parent=Thapsdraft457;constitutive=1;ensembl_end_phase=1;rank=3 bd_23x33 . exon 69409 69941 . + . ID=Thapsdraft457.4;Parent=Thapsdraft457;constitutive=1;ensembl_end_phase=2;rank=4 bd_23x33 . exon 70027 71174 . + . ID=Thapsdraft457.5;Parent=Thapsdraft457;constitutive=1;ensembl_end_phase=2;rank=5 bd_23x33 . repeat_region 83878 83927 . ? . description=dust bd_23x33 ensembl protein_coding_gene 85682 87672 . - . ID=Thapsdraft1237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 85682 87672 . - . ID=Thapsdraft1237;Parent=Thapsdraft1237;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 85682 86317 . - 0 ID=Thapsdraft1237;Parent=Thapsdraft1237;rank=3 bd_23x33 . exon 85682 86317 . - . ID=Thapsdraft1237.3;Parent=Thapsdraft1237;constitutive=1;rank=3 bd_23x33 . CDS 86506 87089 . - 0 ID=Thapsdraft1237;Parent=Thapsdraft1237;rank=2 bd_23x33 . exon 86506 87089 . - . ID=Thapsdraft1237.2;Parent=Thapsdraft1237;constitutive=1;ensembl_end_phase=2;rank=2 bd_23x33 . CDS 87171 87672 . - 0 ID=Thapsdraft1237;Parent=Thapsdraft1237;rank=1 bd_23x33 . exon 87171 87672 . - . ID=Thapsdraft1237.1;Parent=Thapsdraft1237;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 ensembl protein_coding_gene 80689 81465 . - . ID=Thapsdraft1883;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 80689 81465 . - . ID=Thapsdraft1883;Parent=Thapsdraft1883;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 80689 80717 . - 0 ID=Thapsdraft1883;Parent=Thapsdraft1883;rank=3 bd_23x33 . exon 80689 80717 . - . ID=Thapsdraft1883.3;Parent=Thapsdraft1883;constitutive=1;ensembl_end_phase=2;rank=3 bd_23x33 . CDS 80744 80803 . - 0 ID=Thapsdraft1883;Parent=Thapsdraft1883;rank=2 bd_23x33 . exon 80744 80803 . - . ID=Thapsdraft1883.2;Parent=Thapsdraft1883;constitutive=1;rank=2 bd_23x33 . CDS 80838 81465 . - 0 ID=Thapsdraft1883;Parent=Thapsdraft1883;rank=1 bd_23x33 . exon 80838 81465 . - . ID=Thapsdraft1883.1;Parent=Thapsdraft1883;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 ensembl protein_coding_gene 82352 83026 . + . ID=Thapsdraft1884;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 82352 83026 . + . ID=Thapsdraft1884;Parent=Thapsdraft1884;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 82352 82537 . + 0 ID=Thapsdraft1884;Parent=Thapsdraft1884;rank=1 bd_23x33 . exon 82352 82537 . + . ID=Thapsdraft1884.1;Parent=Thapsdraft1884;constitutive=1;rank=1 bd_23x33 . CDS 82583 83026 . + 0 ID=Thapsdraft1884;Parent=Thapsdraft1884;rank=2 bd_23x33 . exon 82583 83026 . + . ID=Thapsdraft1884.2;Parent=Thapsdraft1884;constitutive=1;rank=2 bd_23x33 ensembl protein_coding_gene 84518 85333 . + . ID=Thapsdraft930;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 84518 85333 . + . ID=Thapsdraft930;Parent=Thapsdraft930;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 84518 85333 . + 0 ID=Thapsdraft930;Parent=Thapsdraft930;rank=1 bd_23x33 . exon 84518 85333 . + . ID=Thapsdraft930.1;Parent=Thapsdraft930;constitutive=1;rank=1 bd_23x33 ensembl protein_coding_gene 88491 89454 . + . ID=Thapsdraft933;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 88491 89454 . + . ID=Thapsdraft933;Parent=Thapsdraft933;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 88491 88986 . + 0 ID=Thapsdraft933;Parent=Thapsdraft933;rank=1 bd_23x33 . exon 88491 88986 . + . ID=Thapsdraft933.1;Parent=Thapsdraft933;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 . CDS 89060 89454 . + 0 ID=Thapsdraft933;Parent=Thapsdraft933;rank=2 bd_23x33 . exon 89060 89454 . + . ID=Thapsdraft933.2;Parent=Thapsdraft933;constitutive=1;ensembl_end_phase=2;rank=2 bd_23x33 ensembl protein_coding_gene 90549 91904 . - . ID=Thapsdraft934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEN8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 90549 91904 . - . ID=Thapsdraft934;Parent=Thapsdraft934;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 90549 91904 . - 0 ID=Thapsdraft934;Parent=Thapsdraft934;rank=1 bd_23x33 . exon 90549 91904 . - . ID=Thapsdraft934.1;Parent=Thapsdraft934;constitutive=1;rank=1 bd_23x33 . repeat_region 95878 105029 . ? . description=dust bd_23x33 . repeat_region 105614 105627 . ? . description=dust bd_23x33 . repeat_region 106919 106948 . ? . description=trf bd_23x33 . repeat_region 107893 107951 . ? . description=trf bd_23x33 . repeat_region 108251 108280 . ? . description=dust bd_23x33 ensembl protein_coding_gene 107368 111113 . + . ID=Thapsdraft935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL4];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 107368 111113 . + . ID=Thapsdraft935;Parent=Thapsdraft935;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 107368 107986 . + 0 ID=Thapsdraft935;Parent=Thapsdraft935;rank=1 bd_23x33 . exon 107368 107986 . + . ID=Thapsdraft935.1;Parent=Thapsdraft935;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 . CDS 108098 109144 . + 0 ID=Thapsdraft935;Parent=Thapsdraft935;rank=2 bd_23x33 . exon 108098 109144 . + . ID=Thapsdraft935.2;Parent=Thapsdraft935;constitutive=1;rank=2 bd_23x33 . CDS 109430 109615 . + 0 ID=Thapsdraft935;Parent=Thapsdraft935;rank=3 bd_23x33 . CDS 109707 110387 . + 0 ID=Thapsdraft935;Parent=Thapsdraft935;rank=4 bd_23x33 . CDS 110467 111113 . + 0 ID=Thapsdraft935;Parent=Thapsdraft935;rank=5 bd_23x33 ensembl protein_coding_gene 111653 113155 . - . ID=Thapsdraft460;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL5];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 111653 113155 . - . ID=Thapsdraft460;Parent=Thapsdraft460;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 111653 111872 . - 0 ID=Thapsdraft460;Parent=Thapsdraft460;rank=5 bd_23x33 . exon 111653 111872 . - . ID=Thapsdraft460.5;Parent=Thapsdraft460;constitutive=1;ensembl_end_phase=1;rank=5 bd_23x33 . CDS 111900 112213 . - 0 ID=Thapsdraft460;Parent=Thapsdraft460;rank=4 bd_23x33 . exon 111900 112213 . - . ID=Thapsdraft460.4;Parent=Thapsdraft460;constitutive=1;ensembl_end_phase=2;rank=4 bd_23x33 . CDS 112313 112397 . - 0 ID=Thapsdraft460;Parent=Thapsdraft460;rank=3 bd_23x33 . exon 112313 112397 . - . ID=Thapsdraft460.3;Parent=Thapsdraft460;constitutive=1;ensembl_end_phase=1;rank=3 bd_23x33 . CDS 112434 112870 . - 0 ID=Thapsdraft460;Parent=Thapsdraft460;rank=2 bd_23x33 . exon 112434 112870 . - . ID=Thapsdraft460.2;Parent=Thapsdraft460;constitutive=1;ensembl_end_phase=2;rank=2 bd_23x33 . CDS 112961 113155 . - 0 ID=Thapsdraft460;Parent=Thapsdraft460;rank=1 bd_23x33 . exon 112961 113155 . - . ID=Thapsdraft460.1;Parent=Thapsdraft460;constitutive=1;rank=1 bd_23x33 . exon 109430 109615 . + . ID=Thapsdraft935.3;Parent=Thapsdraft935;constitutive=1;rank=3 bd_23x33 . exon 109707 110387 . + . ID=Thapsdraft935.4;Parent=Thapsdraft935;constitutive=1;rank=4 bd_23x33 . exon 110467 111113 . + . ID=Thapsdraft935.5;Parent=Thapsdraft935;constitutive=1;ensembl_end_phase=2;rank=5 bd_23x33 ensembl protein_coding_gene 113853 114880 . + . ID=Thapsdraft937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL6];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 113853 114880 . + . ID=Thapsdraft937;Parent=Thapsdraft937;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 113853 114200 . + 0 ID=Thapsdraft937;Parent=Thapsdraft937;rank=1 bd_23x33 . exon 113853 114200 . + . ID=Thapsdraft937.1;Parent=Thapsdraft937;constitutive=1;rank=1 bd_23x33 . CDS 114310 114414 . + 0 ID=Thapsdraft937;Parent=Thapsdraft937;rank=2 bd_23x33 . exon 114310 114414 . + . ID=Thapsdraft937.2;Parent=Thapsdraft937;constitutive=1;rank=2 bd_23x33 . CDS 114554 114880 . + 0 ID=Thapsdraft937;Parent=Thapsdraft937;rank=3 bd_23x33 . exon 114554 114880 . + . ID=Thapsdraft937.3;Parent=Thapsdraft937;constitutive=1;rank=3 bd_23x33 ensembl protein_coding_gene 116316 118804 . + . ID=Thapsdraft938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL7];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 116316 118804 . + . ID=Thapsdraft938;Parent=Thapsdraft938;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 116316 116801 . + 0 ID=Thapsdraft938;Parent=Thapsdraft938;rank=1 bd_23x33 . exon 116316 116801 . + . ID=Thapsdraft938.1;Parent=Thapsdraft938;constitutive=1;rank=1 bd_23x33 . CDS 116886 117364 . + 0 ID=Thapsdraft938;Parent=Thapsdraft938;rank=2 bd_23x33 . exon 116886 117364 . + . ID=Thapsdraft938.2;Parent=Thapsdraft938;constitutive=1;ensembl_end_phase=2;rank=2 bd_23x33 . CDS 117492 117585 . + 0 ID=Thapsdraft938;Parent=Thapsdraft938;rank=3 bd_23x33 . exon 117492 117585 . + . ID=Thapsdraft938.3;Parent=Thapsdraft938;constitutive=1;ensembl_end_phase=1;rank=3 bd_23x33 . CDS 117676 117856 . + 0 ID=Thapsdraft938;Parent=Thapsdraft938;rank=4 bd_23x33 . exon 117676 117856 . + . ID=Thapsdraft938.4;Parent=Thapsdraft938;constitutive=1;ensembl_end_phase=1;rank=4 bd_23x33 . CDS 117958 118076 . + 0 ID=Thapsdraft938;Parent=Thapsdraft938;rank=5 bd_23x33 . exon 117958 118076 . + . ID=Thapsdraft938.5;Parent=Thapsdraft938;constitutive=1;ensembl_end_phase=2;rank=5 bd_23x33 . CDS 118193 118394 . + 0 ID=Thapsdraft938;Parent=Thapsdraft938;rank=6 bd_23x33 . exon 118193 118394 . + . ID=Thapsdraft938.6;Parent=Thapsdraft938;constitutive=1;ensembl_end_phase=1;rank=6 bd_23x33 . CDS 118491 118804 . + 0 ID=Thapsdraft938;Parent=Thapsdraft938;rank=7 bd_23x33 . exon 118491 118804 . + . ID=Thapsdraft938.7;Parent=Thapsdraft938;constitutive=1;ensembl_end_phase=2;rank=7 bd_23x33 . repeat_region 121139 121169 . ? . description=trf bd_23x33 . repeat_region 121479 121524 . ? . description=trf bd_23x33 . repeat_region 121492 121534 . ? . description=trf bd_23x33 . repeat_region 123732 123749 . ? . description=dust bd_23x33 ensembl protein_coding_gene 124117 126004 . - . ID=Thapsdraft1670;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEK9];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 124117 126004 . - . ID=Thapsdraft1670;Parent=Thapsdraft1670;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 124117 124641 . - 0 ID=Thapsdraft1670;Parent=Thapsdraft1670;rank=5 bd_23x33 . exon 124117 124641 . - . ID=Thapsdraft1670.5;Parent=Thapsdraft1670;constitutive=1;rank=5 bd_23x33 . CDS 124732 125136 . - 0 ID=Thapsdraft1670;Parent=Thapsdraft1670;rank=4 bd_23x33 . exon 124732 125136 . - . ID=Thapsdraft1670.4;Parent=Thapsdraft1670;constitutive=1;rank=4 bd_23x33 . CDS 125255 125412 . - 0 ID=Thapsdraft1670;Parent=Thapsdraft1670;rank=3 bd_23x33 . exon 125255 125412 . - . ID=Thapsdraft1670.3;Parent=Thapsdraft1670;constitutive=1;ensembl_end_phase=2;rank=3 bd_23x33 . CDS 125557 125754 . - 0 ID=Thapsdraft1670;Parent=Thapsdraft1670;rank=2 bd_23x33 . exon 125557 125754 . - . ID=Thapsdraft1670.2;Parent=Thapsdraft1670;constitutive=1;rank=2 bd_23x33 . CDS 125791 126004 . - 0 ID=Thapsdraft1670;Parent=Thapsdraft1670;rank=1 bd_23x33 . exon 125791 126004 . - . ID=Thapsdraft1670.1;Parent=Thapsdraft1670;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 ensembl protein_coding_gene 122421 123386 . + . ID=Thapsdraft1885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL8];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 122421 123386 . + . ID=Thapsdraft1885;Parent=Thapsdraft1885;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 122421 122931 . + 0 ID=Thapsdraft1885;Parent=Thapsdraft1885;rank=1 bd_23x33 . exon 122421 122931 . + . ID=Thapsdraft1885.1;Parent=Thapsdraft1885;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 . CDS 123060 123189 . + 0 ID=Thapsdraft1885;Parent=Thapsdraft1885;rank=2 bd_23x33 . exon 123060 123189 . + . ID=Thapsdraft1885.2;Parent=Thapsdraft1885;constitutive=1;ensembl_end_phase=1;rank=2 bd_23x33 . CDS 123323 123386 . + 0 ID=Thapsdraft1885;Parent=Thapsdraft1885;rank=3 bd_23x33 . exon 123323 123386 . + . ID=Thapsdraft1885.3;Parent=Thapsdraft1885;constitutive=1;ensembl_end_phase=1;rank=3 bd_23x33 ensembl protein_coding_gene 126504 127027 . - . ID=Thapsdraft942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL0];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 126504 127027 . - . ID=Thapsdraft942;Parent=Thapsdraft942;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 126504 126657 . - 0 ID=Thapsdraft942;Parent=Thapsdraft942;rank=3 bd_23x33 . exon 126504 126657 . - . ID=Thapsdraft942.3;Parent=Thapsdraft942;constitutive=1;ensembl_end_phase=1;rank=3 bd_23x33 . CDS 126742 126895 . - 0 ID=Thapsdraft942;Parent=Thapsdraft942;rank=2 bd_23x33 . exon 126742 126895 . - . ID=Thapsdraft942.2;Parent=Thapsdraft942;constitutive=1;ensembl_end_phase=1;rank=2 bd_23x33 . CDS 126979 127027 . - 0 ID=Thapsdraft942;Parent=Thapsdraft942;rank=1 bd_23x33 . exon 126979 127027 . - . ID=Thapsdraft942.1;Parent=Thapsdraft942;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 ensembl protein_coding_gene 128262 129260 . + . ID=Thapsdraft943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL1];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 128262 129260 . + . ID=Thapsdraft943;Parent=Thapsdraft943;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 128262 129260 . + 0 ID=Thapsdraft943;Parent=Thapsdraft943;rank=1 bd_23x33 . exon 128262 129260 . + . ID=Thapsdraft943.1;Parent=Thapsdraft943;constitutive=1;rank=1 bd_23x33 ensembl protein_coding_gene 129880 131310 . + . ID=Thapsdraft1888;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL2];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 129880 131310 . + . ID=Thapsdraft1888;Parent=Thapsdraft1888;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 129880 130114 . + 0 ID=Thapsdraft1888;Parent=Thapsdraft1888;rank=1 bd_23x33 . exon 129880 130114 . + . ID=Thapsdraft1888.1;Parent=Thapsdraft1888;constitutive=1;ensembl_end_phase=1;rank=1 bd_23x33 . CDS 130229 130309 . + 0 ID=Thapsdraft1888;Parent=Thapsdraft1888;rank=2 bd_23x33 . exon 130229 130309 . + . ID=Thapsdraft1888.2;Parent=Thapsdraft1888;constitutive=1;rank=2 bd_23x33 . CDS 130410 130700 . + 0 ID=Thapsdraft1888;Parent=Thapsdraft1888;rank=3 bd_23x33 . exon 130410 130700 . + . ID=Thapsdraft1888.3;Parent=Thapsdraft1888;constitutive=1;rank=3 bd_23x33 . CDS 130778 131310 . + 0 ID=Thapsdraft1888;Parent=Thapsdraft1888;rank=4 bd_23x33 . exon 130778 131310 . + . ID=Thapsdraft1888.4;Parent=Thapsdraft1888;constitutive=1;ensembl_end_phase=2;rank=4 bd_23x33 ensembl protein_coding_gene 132655 137815 . + . ID=Thapsdraft945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LEL3];external_name=Thaps24712;logic_name=jgi_thaps3 bd_23x33 ensembl transcript 132655 137815 . + . ID=Thapsdraft945;Parent=Thapsdraft945;biotype=protein_coding;logic_name=jgi_thaps3 bd_23x33 . CDS 132655 132795 . + 0 ID=Thapsdraft945;Parent=Thapsdraft945;rank=1 bd_23x33 . exon 132655 132795 . + . ID=Thapsdraft945.1;Parent=Thapsdraft945;constitutive=1;rank=1 bd_23x33 . CDS 132901 134544 . + 0 ID=Thapsdraft945;Parent=Thapsdraft945;rank=2 bd_23x33 . exon 132901 134544 . + . ID=Thapsdraft945.2;Parent=Thapsdraft945;constitutive=1;rank=2 bd_23x33 . CDS 134914 136125 . + 0 ID=Thapsdraft945;Parent=Thapsdraft945;rank=3 bd_23x33 . exon 134914 136125 . + . ID=Thapsdraft945.3;Parent=Thapsdraft945;constitutive=1;rank=3 bd_23x33 . CDS 136310 136560 . + 0 ID=Thapsdraft945;Parent=Thapsdraft945;rank=4 bd_23x33 . exon 136310 136560 . + . ID=Thapsdraft945.4;Parent=Thapsdraft945;constitutive=1;ensembl_end_phase=2;rank=4 bd_23x33 . CDS 136660 137515 . + 0 ID=Thapsdraft945;Parent=Thapsdraft945;rank=5 bd_23x33 . exon 136660 137515 . + . ID=Thapsdraft945.5;Parent=Thapsdraft945;constitutive=1;ensembl_end_phase=1;rank=5 bd_23x33 . CDS 137669 137815 . + 0 ID=Thapsdraft945;Parent=Thapsdraft945;rank=6 bd_23x33 . exon 137669 137815 . + . ID=Thapsdraft945.6;Parent=Thapsdraft945;constitutive=1;rank=6 ##gff-version 3 ##sequence-region 19b_31 1 151677 chr19b_31 . repeat_region 1145 1174 . ? . description=trf chr19b_31 . repeat_region 4043 4052 . ? . description=dust chr19b_31 . repeat_region 5662 5715 . + . description=TE2_TP chr19b_31 . repeat_region 5881 5904 . ? . description=trf chr19b_31 ensembl protein_coding_gene 1096 2076 . + . ID=Thaps25500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDI2];external_name=Thaps25500;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 1096 2076 . + . ID=Thaps25500;Parent=Thaps25500;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 1096 2076 . + 0 ID=Thaps25500;Parent=Thaps25500;rank=1 chr19b_31 . exon 1096 2076 . + . ID=Thaps25500.1;Parent=Thaps25500;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 5909 8101 . + . ID=Thaps264610;biotype=protein_coding;description=Dipeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8LDI3];external_name=Thaps264610;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 5909 8101 . + . ID=Thaps264610;Parent=Thaps264610;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 5909 6063 . + 0 ID=Thaps264610;Parent=Thaps264610;rank=1 chr19b_31 . exon 5909 6063 . + . ID=Thaps264610.1;Parent=Thaps264610;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 . CDS 6064 6784 . + 0 ID=Thaps264610;Parent=Thaps264610;rank=2 chr19b_31 . exon 6064 6784 . + . ID=Thaps264610.2;Parent=Thaps264610;constitutive=1;ensembl_end_phase=1;rank=2 chr19b_31 . CDS 6900 7059 . + 0 ID=Thaps264610;Parent=Thaps264610;rank=3 chr19b_31 . exon 6900 7059 . + . ID=Thaps264610.3;Parent=Thaps264610;constitutive=1;ensembl_end_phase=1;rank=3 chr19b_31 . CDS 7155 7184 . + 0 ID=Thaps264610;Parent=Thaps264610;rank=4 chr19b_31 . exon 7155 7184 . + . ID=Thaps264610.4;Parent=Thaps264610;constitutive=1;rank=4 chr19b_31 . CDS 7270 7436 . + 0 ID=Thaps264610;Parent=Thaps264610;rank=5 chr19b_31 . exon 7270 7436 . + . ID=Thaps264610.5;Parent=Thaps264610;constitutive=1;ensembl_end_phase=2;rank=5 chr19b_31 . CDS 7476 8101 . + 0 ID=Thaps264610;Parent=Thaps264610;rank=6 chr19b_31 . exon 7476 8101 . + . ID=Thaps264610.6;Parent=Thaps264610;constitutive=1;ensembl_end_phase=2;rank=6 chr19b_31 ensembl protein_coding_gene 12132 18848 . - . ID=Thaps11261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDI5];external_name=Thaps11261;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 12132 18848 . - . ID=Thaps11261;Parent=Thaps11261;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 12132 15642 . - 0 ID=Thaps11261;Parent=Thaps11261;rank=3 chr19b_31 . exon 12132 15642 . - . ID=Thaps11261.3;Parent=Thaps11261;constitutive=1;ensembl_end_phase=1;rank=3 chr19b_31 . CDS 16089 18301 . - 0 ID=Thaps11261;Parent=Thaps11261;rank=2 chr19b_31 . exon 16089 18301 . - . ID=Thaps11261.2;Parent=Thaps11261;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 . CDS 18387 18848 . - 0 ID=Thaps11261;Parent=Thaps11261;rank=1 chr19b_31 . exon 18387 18848 . - . ID=Thaps11261.1;Parent=Thaps11261;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 11162 11812 . + . ID=Thaps16193;biotype=protein_coding;description=Protease [Source:UniProtKB/TrEMBL%3BAcc:B8LDI4];external_name=Thaps16193;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 11162 11812 . + . ID=Thaps16193;Parent=Thaps16193;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 11162 11812 . + 0 ID=Thaps16193;Parent=Thaps16193;rank=1 chr19b_31 . exon 11162 11812 . + . ID=Thaps16193.1;Parent=Thaps16193;constitutive=1;rank=1 chr19b_31 . repeat_region 23666 23694 . ? . description=trf chr19b_31 . repeat_region 25074 25125 . ? . description=trf chr19b_31 ensembl protein_coding_gene 25943 27766 . - . ID=Thaps11265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ0];external_name=Thaps11265;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 25943 27766 . - . ID=Thaps11265;Parent=Thaps11265;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 25943 27766 . - 0 ID=Thaps11265;Parent=Thaps11265;rank=1 chr19b_31 . exon 25943 27766 . - . ID=Thaps11265.1;Parent=Thaps11265;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 19927 21852 . - . ID=Thaps269988;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDI7];external_name=Thaps269988;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 19927 21852 . - . ID=Thaps269988;Parent=Thaps269988;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 19927 20624 . - 0 ID=Thaps269988;Parent=Thaps269988;rank=7 chr19b_31 . exon 19927 20624 . - . ID=Thaps269988.7;Parent=Thaps269988;constitutive=1;ensembl_end_phase=2;rank=7 chr19b_31 . CDS 20664 20762 . - 0 ID=Thaps269988;Parent=Thaps269988;rank=6 chr19b_31 . exon 20664 20762 . - . ID=Thaps269988.6;Parent=Thaps269988;constitutive=1;rank=6 chr19b_31 . CDS 20907 21076 . - 0 ID=Thaps269988;Parent=Thaps269988;rank=5 chr19b_31 . exon 20907 21076 . - . ID=Thaps269988.5;Parent=Thaps269988;constitutive=1;ensembl_end_phase=2;rank=5 chr19b_31 . CDS 21116 21233 . - 0 ID=Thaps269988;Parent=Thaps269988;rank=4 chr19b_31 . exon 21116 21233 . - . ID=Thaps269988.4;Parent=Thaps269988;constitutive=1;ensembl_end_phase=1;rank=4 chr19b_31 . CDS 21342 21433 . - 0 ID=Thaps269988;Parent=Thaps269988;rank=3 chr19b_31 . exon 21342 21433 . - . ID=Thaps269988.3;Parent=Thaps269988;constitutive=1;ensembl_end_phase=2;rank=3 chr19b_31 . CDS 21454 21479 . - 0 ID=Thaps269988;Parent=Thaps269988;rank=2 chr19b_31 . exon 21454 21479 . - . ID=Thaps269988.2;Parent=Thaps269988;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 . CDS 21529 21852 . - 0 ID=Thaps269988;Parent=Thaps269988;rank=1 chr19b_31 . exon 21529 21852 . - . ID=Thaps269988.1;Parent=Thaps269988;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 22276 23948 . - . ID=Thaps38312;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDI8];external_name=Thaps38312;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 22276 23948 . - . ID=Thaps38312;Parent=Thaps38312;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 22276 23224 . - 0 ID=Thaps38312;Parent=Thaps38312;rank=3 chr19b_31 . exon 22276 23224 . - . ID=Thaps38312.3;Parent=Thaps38312;constitutive=1;ensembl_end_phase=1;rank=3 chr19b_31 . CDS 23261 23476 . - 0 ID=Thaps38312;Parent=Thaps38312;rank=2 chr19b_31 . exon 23261 23476 . - . ID=Thaps38312.2;Parent=Thaps38312;constitutive=1;rank=2 chr19b_31 . CDS 23704 23948 . - 0 ID=Thaps38312;Parent=Thaps38312;rank=1 chr19b_31 . exon 23704 23948 . - . ID=Thaps38312.1;Parent=Thaps38312;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 ensembl protein_coding_gene 19388 19627 . + . ID=Thaps38317;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDI6];external_name=Thaps38317;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 19388 19627 . + . ID=Thaps38317;Parent=Thaps38317;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 19388 19627 . + 0 ID=Thaps38317;Parent=Thaps38317;rank=1 chr19b_31 . exon 19388 19627 . + . ID=Thaps38317.1;Parent=Thaps38317;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 25233 25817 . + . ID=Thaps38322;biotype=protein_coding;description=Sar1-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDI9];external_name=Thaps38322;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 25233 25817 . + . ID=Thaps38322;Parent=Thaps38322;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 25233 25817 . + 0 ID=Thaps38322;Parent=Thaps38322;rank=1 chr19b_31 . exon 25233 25817 . + . ID=Thaps38322.1;Parent=Thaps38322;constitutive=1;rank=1 chr19b_31 . repeat_region 28465 28472 . ? . description=dust chr19b_31 ensembl protein_coding_gene 28831 29511 . - . ID=Thaps11266;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ1];external_name=Thaps11266;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 28831 29511 . - . ID=Thaps11266;Parent=Thaps11266;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 28831 29511 . - 0 ID=Thaps11266;Parent=Thaps11266;rank=1 chr19b_31 . exon 28831 29511 . - . ID=Thaps11266.1;Parent=Thaps11266;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 31728 32618 . - . ID=Thaps11267;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ2];external_name=Thaps11267;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 31728 32618 . - . ID=Thaps11267;Parent=Thaps11267;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 31728 32618 . - 0 ID=Thaps11267;Parent=Thaps11267;rank=1 chr19b_31 . exon 31728 32618 . - . ID=Thaps11267.1;Parent=Thaps11267;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 33876 34826 . - . ID=Thaps11268;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ3];external_name=Thaps11268;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 33876 34826 . - . ID=Thaps11268;Parent=Thaps11268;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 33876 34826 . - 0 ID=Thaps11268;Parent=Thaps11268;rank=1 chr19b_31 . exon 33876 34826 . - . ID=Thaps11268.1;Parent=Thaps11268;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 35874 36893 . + . ID=Thaps14708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ4];external_name=Thaps14708;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 35874 36893 . + . ID=Thaps14708;Parent=Thaps14708;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 35874 36220 . + 0 ID=Thaps14708;Parent=Thaps14708;rank=1 chr19b_31 . exon 35874 36220 . + . ID=Thaps14708.1;Parent=Thaps14708;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 . CDS 36284 36893 . + 0 ID=Thaps14708;Parent=Thaps14708;rank=2 chr19b_31 . exon 36284 36893 . + . ID=Thaps14708.2;Parent=Thaps14708;constitutive=1;ensembl_end_phase=1;rank=2 chr19b_31 ensembl protein_coding_gene 37102 37941 . - . ID=Thaps25505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ5];external_name=Thaps25505;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 37102 37941 . - . ID=Thaps25505;Parent=Thaps25505;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 37102 37941 . - 0 ID=Thaps25505;Parent=Thaps25505;rank=1 chr19b_31 . exon 37102 37941 . - . ID=Thaps25505.1;Parent=Thaps25505;constitutive=1;rank=1 chr19b_31 . repeat_region 43964 44008 . ? . description=trf chr19b_31 ensembl protein_coding_gene 38674 39510 . - . ID=Thaps11271;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ6];external_name=Thaps11271;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 38674 39510 . - . ID=Thaps11271;Parent=Thaps11271;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 38674 39510 . - 0 ID=Thaps11271;Parent=Thaps11271;rank=1 chr19b_31 . exon 38674 39510 . - . ID=Thaps11271.1;Parent=Thaps11271;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 40759 41442 . + . ID=Thaps11273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ8];external_name=Thaps11273;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 40759 41442 . + . ID=Thaps11273;Parent=Thaps11273;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 40759 41442 . + 0 ID=Thaps11273;Parent=Thaps11273;rank=1 chr19b_31 . exon 40759 41442 . + . ID=Thaps11273.1;Parent=Thaps11273;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 43425 43922 . - . ID=Thaps11275;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK0];external_name=Thaps11275;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 43425 43922 . - . ID=Thaps11275;Parent=Thaps11275;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 43425 43922 . - 0 ID=Thaps11275;Parent=Thaps11275;rank=1 chr19b_31 . exon 43425 43922 . - . ID=Thaps11275.1;Parent=Thaps11275;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 41995 42891 . + . ID=Thaps25506;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ9];external_name=Thaps25506;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 41995 42891 . + . ID=Thaps25506;Parent=Thaps25506;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 41995 42328 . + 0 ID=Thaps25506;Parent=Thaps25506;rank=1 chr19b_31 . exon 41995 42328 . + . ID=Thaps25506.1;Parent=Thaps25506;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 . CDS 42461 42891 . + 0 ID=Thaps25506;Parent=Thaps25506;rank=2 chr19b_31 . exon 42461 42891 . + . ID=Thaps25506.2;Parent=Thaps25506;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 ensembl protein_coding_gene 45894 47804 . - . ID=Thaps25507;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK2];external_name=Thaps25507;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 45894 47804 . - . ID=Thaps25507;Parent=Thaps25507;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 45894 47433 . - 0 ID=Thaps25507;Parent=Thaps25507;rank=3 chr19b_31 . exon 45894 47433 . - . ID=Thaps25507.3;Parent=Thaps25507;constitutive=1;ensembl_end_phase=1;rank=3 chr19b_31 . CDS 47542 47691 . - 0 ID=Thaps25507;Parent=Thaps25507;rank=2 chr19b_31 . CDS 47797 47804 . - 0 ID=Thaps25507;Parent=Thaps25507;rank=1 chr19b_31 ensembl protein_coding_gene 39778 40347 . - . ID=Thaps38306;biotype=protein_coding;description=Fucoxanthin chl a/c light-harvesting protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDJ7];external_name=LHCR8;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 39778 40347 . - . ID=Thaps38306;Parent=Thaps38306;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 39778 40347 . - 0 ID=Thaps38306;Parent=Thaps38306;rank=1 chr19b_31 . exon 39778 40347 . - . ID=Thaps38306.1;Parent=Thaps38306;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 44434 45048 . + . ID=Thaps38335;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK1];external_name=PSB3;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 44434 45048 . + . ID=Thaps38335;Parent=Thaps38335;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 44434 45048 . + 0 ID=Thaps38335;Parent=Thaps38335;rank=1 chr19b_31 . exon 44434 45048 . + . ID=Thaps38335.1;Parent=Thaps38335;constitutive=1;rank=1 chr19b_31 . repeat_region 50482 50494 . ? . description=dust chr19b_31 ensembl protein_coding_gene 48358 48840 . + . ID=Thaps11278;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK3];external_name=Thaps11278;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 48358 48840 . + . ID=Thaps11278;Parent=Thaps11278;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 48358 48840 . + 0 ID=Thaps11278;Parent=Thaps11278;rank=1 chr19b_31 . exon 48358 48840 . + . ID=Thaps11278.1;Parent=Thaps11278;constitutive=1;rank=1 chr19b_31 . exon 47542 47691 . - . ID=Thaps25507.2;Parent=Thaps25507;constitutive=1;rank=2 chr19b_31 . exon 47797 47804 . - . ID=Thaps25507.1;Parent=Thaps25507;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 ensembl protein_coding_gene 50526 52172 . - . ID=Thaps25508;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK4];external_name=Thaps25508;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 50526 52172 . - . ID=Thaps25508;Parent=Thaps25508;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 50526 52172 . - 0 ID=Thaps25508;Parent=Thaps25508;rank=1 chr19b_31 . exon 50526 52172 . - . ID=Thaps25508.1;Parent=Thaps25508;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 53175 54686 . - . ID=Thaps25509;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK5];external_name=Thaps25509;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 53175 54686 . - . ID=Thaps25509;Parent=Thaps25509;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 53175 54686 . - 0 ID=Thaps25509;Parent=Thaps25509;rank=1 chr19b_31 . exon 53175 54686 . - . ID=Thaps25509.1;Parent=Thaps25509;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 56368 59847 . + . ID=Thaps264621;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK6];external_name=Thaps264621;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 56368 59847 . + . ID=Thaps264621;Parent=Thaps264621;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 56368 56696 . + 0 ID=Thaps264621;Parent=Thaps264621;rank=1 chr19b_31 . exon 56368 56696 . + . ID=Thaps264621.1;Parent=Thaps264621;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 . CDS 56784 56886 . + 0 ID=Thaps264621;Parent=Thaps264621;rank=2 chr19b_31 . exon 56784 56886 . + . ID=Thaps264621.2;Parent=Thaps264621;constitutive=1;ensembl_end_phase=1;rank=2 chr19b_31 . CDS 56917 57213 . + 0 ID=Thaps264621;Parent=Thaps264621;rank=3 chr19b_31 . CDS 57293 58022 . + 0 ID=Thaps264621;Parent=Thaps264621;rank=4 chr19b_31 . CDS 58115 58635 . + 0 ID=Thaps264621;Parent=Thaps264621;rank=5 chr19b_31 . CDS 58757 58937 . + 0 ID=Thaps264621;Parent=Thaps264621;rank=6 chr19b_31 . CDS 59010 59107 . + 0 ID=Thaps264621;Parent=Thaps264621;rank=7 chr19b_31 . CDS 59189 59847 . + 0 ID=Thaps264621;Parent=Thaps264621;rank=8 chr19b_31 ensembl protein_coding_gene 59933 61576 . - . ID=Thaps11282;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK7];external_name=Thaps11282;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 59933 61576 . - . ID=Thaps11282;Parent=Thaps11282;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 59933 61576 . - 0 ID=Thaps11282;Parent=Thaps11282;rank=1 chr19b_31 . exon 59933 61576 . - . ID=Thaps11282.1;Parent=Thaps11282;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 64437 65684 . - . ID=Thaps11283;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK8];external_name=Thaps11283;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 64437 65684 . - . ID=Thaps11283;Parent=Thaps11283;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 64437 65684 . - 0 ID=Thaps11283;Parent=Thaps11283;rank=1 chr19b_31 . exon 64437 65684 . - . ID=Thaps11283.1;Parent=Thaps11283;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 65891 67332 . + . ID=Thaps25510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDK9];external_name=Thaps25510;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 65891 67332 . + . ID=Thaps25510;Parent=Thaps25510;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 65891 67003 . + 0 ID=Thaps25510;Parent=Thaps25510;rank=1 chr19b_31 . exon 65891 67003 . + . ID=Thaps25510.1;Parent=Thaps25510;constitutive=1;rank=1 chr19b_31 . CDS 67167 67240 . + 0 ID=Thaps25510;Parent=Thaps25510;rank=2 chr19b_31 . CDS 67287 67332 . + 0 ID=Thaps25510;Parent=Thaps25510;rank=3 chr19b_31 . exon 56917 57213 . + . ID=Thaps264621.3;Parent=Thaps264621;constitutive=1;rank=3 chr19b_31 . exon 57293 58022 . + . ID=Thaps264621.4;Parent=Thaps264621;constitutive=1;ensembl_end_phase=1;rank=4 chr19b_31 . exon 58115 58635 . + . ID=Thaps264621.5;Parent=Thaps264621;constitutive=1;ensembl_end_phase=2;rank=5 chr19b_31 . exon 58757 58937 . + . ID=Thaps264621.6;Parent=Thaps264621;constitutive=1;ensembl_end_phase=1;rank=6 chr19b_31 . exon 59010 59107 . + . ID=Thaps264621.7;Parent=Thaps264621;constitutive=1;ensembl_end_phase=2;rank=7 chr19b_31 . exon 59189 59847 . + . ID=Thaps264621.8;Parent=Thaps264621;constitutive=1;ensembl_end_phase=2;rank=8 chr19b_31 . repeat_region 72149 72167 . ? . description=dust chr19b_31 ensembl protein_coding_gene 71447 72970 . + . ID=Thaps11286;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDL1];external_name=Thaps11286;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 71447 72970 . + . ID=Thaps11286;Parent=Thaps11286;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 71447 72970 . + 0 ID=Thaps11286;Parent=Thaps11286;rank=1 chr19b_31 . exon 71447 72970 . + . ID=Thaps11286.1;Parent=Thaps11286;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 73150 80231 . - . ID=Thaps11287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDL2];external_name=Thaps11287;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 73150 80231 . - . ID=Thaps11287;Parent=Thaps11287;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 73150 73586 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=13 chr19b_31 . exon 73150 73586 . - . ID=Thaps11287.13;Parent=Thaps11287;constitutive=1;ensembl_end_phase=2;rank=13 chr19b_31 . CDS 73658 73928 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=12 chr19b_31 . exon 73658 73928 . - . ID=Thaps11287.12;Parent=Thaps11287;constitutive=1;ensembl_end_phase=1;rank=12 chr19b_31 . CDS 74015 74078 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=11 chr19b_31 . exon 74015 74078 . - . ID=Thaps11287.11;Parent=Thaps11287;constitutive=1;ensembl_end_phase=1;rank=11 chr19b_31 . CDS 74162 74319 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=10 chr19b_31 . exon 74162 74319 . - . ID=Thaps11287.10;Parent=Thaps11287;constitutive=1;ensembl_end_phase=2;rank=10 chr19b_31 . CDS 74406 74569 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=9 chr19b_31 . exon 74406 74569 . - . ID=Thaps11287.9;Parent=Thaps11287;constitutive=1;ensembl_end_phase=2;rank=9 chr19b_31 . CDS 74691 74770 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=8 chr19b_31 . exon 74691 74770 . - . ID=Thaps11287.8;Parent=Thaps11287;constitutive=1;ensembl_end_phase=2;rank=8 chr19b_31 . CDS 75123 75226 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=7 chr19b_31 . exon 75123 75226 . - . ID=Thaps11287.7;Parent=Thaps11287;constitutive=1;ensembl_end_phase=2;rank=7 chr19b_31 . CDS 75338 75391 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=6 chr19b_31 . exon 75338 75391 . - . ID=Thaps11287.6;Parent=Thaps11287;constitutive=1;rank=6 chr19b_31 . CDS 75463 75632 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=5 chr19b_31 . exon 75463 75632 . - . ID=Thaps11287.5;Parent=Thaps11287;constitutive=1;ensembl_end_phase=2;rank=5 chr19b_31 . CDS 75869 78064 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=4 chr19b_31 . CDS 78090 78236 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=3 chr19b_31 . CDS 78342 78887 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=2 chr19b_31 . CDS 78986 80231 . - 0 ID=Thaps11287;Parent=Thaps11287;rank=1 chr19b_31 . exon 67167 67240 . + . ID=Thaps25510.2;Parent=Thaps25510;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 . exon 67287 67332 . + . ID=Thaps25510.3;Parent=Thaps25510;constitutive=1;ensembl_end_phase=1;rank=3 chr19b_31 ensembl protein_coding_gene 67603 70919 . - . ID=Thaps25511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDL0];external_name=Thaps25511;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 67603 70919 . - . ID=Thaps25511;Parent=Thaps25511;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 67603 68847 . - 0 ID=Thaps25511;Parent=Thaps25511;rank=4 chr19b_31 . exon 67603 68847 . - . ID=Thaps25511.4;Parent=Thaps25511;constitutive=1;rank=4 chr19b_31 . CDS 69125 70425 . - 0 ID=Thaps25511;Parent=Thaps25511;rank=3 chr19b_31 . exon 69125 70425 . - . ID=Thaps25511.3;Parent=Thaps25511;constitutive=1;ensembl_end_phase=2;rank=3 chr19b_31 . CDS 70486 70808 . - 0 ID=Thaps25511;Parent=Thaps25511;rank=2 chr19b_31 . exon 70486 70808 . - . ID=Thaps25511.2;Parent=Thaps25511;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 . CDS 70864 70919 . - 0 ID=Thaps25511;Parent=Thaps25511;rank=1 chr19b_31 . exon 70864 70919 . - . ID=Thaps25511.1;Parent=Thaps25511;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 . repeat_region 79810 79841 . ? . description=trf chr19b_31 . repeat_region 79816 79843 . ? . description=trf chr19b_31 . repeat_region 83852 83887 . ? . description=trf chr19b_31 . exon 75869 78064 . - . ID=Thaps11287.4;Parent=Thaps11287;constitutive=1;rank=4 chr19b_31 . exon 78090 78236 . - . ID=Thaps11287.3;Parent=Thaps11287;constitutive=1;rank=3 chr19b_31 . exon 78342 78887 . - . ID=Thaps11287.2;Parent=Thaps11287;constitutive=1;rank=2 chr19b_31 . exon 78986 80231 . - . ID=Thaps11287.1;Parent=Thaps11287;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 ensembl protein_coding_gene 84739 85278 . + . ID=Thaps16695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDL5];external_name=Thaps16695;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 84739 85278 . + . ID=Thaps16695;Parent=Thaps16695;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 84739 85278 . + 0 ID=Thaps16695;Parent=Thaps16695;rank=1 chr19b_31 . exon 84739 85278 . + . ID=Thaps16695.1;Parent=Thaps16695;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 80818 82718 . + . ID=Thaps25512;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDL3];external_name=Thaps25512;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 80818 82718 . + . ID=Thaps25512;Parent=Thaps25512;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 80818 81241 . + 0 ID=Thaps25512;Parent=Thaps25512;rank=1 chr19b_31 . exon 80818 81241 . + . ID=Thaps25512.1;Parent=Thaps25512;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 . CDS 81392 82066 . + 0 ID=Thaps25512;Parent=Thaps25512;rank=2 chr19b_31 . exon 81392 82066 . + . ID=Thaps25512.2;Parent=Thaps25512;constitutive=1;rank=2 chr19b_31 . CDS 82096 82718 . + 0 ID=Thaps25512;Parent=Thaps25512;rank=3 chr19b_31 . exon 82096 82718 . + . ID=Thaps25512.3;Parent=Thaps25512;constitutive=1;ensembl_end_phase=2;rank=3 chr19b_31 ensembl protein_coding_gene 83036 84118 . - . ID=Thaps25513;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDL4];external_name=Thaps25513;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 83036 84118 . - . ID=Thaps25513;Parent=Thaps25513;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 83036 83061 . - 0 ID=Thaps25513;Parent=Thaps25513;rank=3 chr19b_31 . exon 83036 83061 . - . ID=Thaps25513.3;Parent=Thaps25513;constitutive=1;ensembl_end_phase=2;rank=3 chr19b_31 . CDS 83180 83655 . - 0 ID=Thaps25513;Parent=Thaps25513;rank=2 chr19b_31 . exon 83180 83655 . - . ID=Thaps25513.2;Parent=Thaps25513;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 . CDS 83982 84118 . - 0 ID=Thaps25513;Parent=Thaps25513;rank=1 chr19b_31 . exon 83982 84118 . - . ID=Thaps25513.1;Parent=Thaps25513;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 . repeat_region 94373 94381 . ? . description=dust chr19b_31 ensembl protein_coding_gene 93167 95008 . - . ID=Thaps25516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDL8];external_name=Thaps25516;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 93167 95008 . - . ID=Thaps25516;Parent=Thaps25516;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 93167 94035 . - 0 ID=Thaps25516;Parent=Thaps25516;rank=4 chr19b_31 . exon 93167 94035 . - . ID=Thaps25516.4;Parent=Thaps25516;constitutive=1;ensembl_end_phase=2;rank=4 chr19b_31 . CDS 94084 94170 . - 0 ID=Thaps25516;Parent=Thaps25516;rank=3 chr19b_31 . exon 94084 94170 . - . ID=Thaps25516.3;Parent=Thaps25516;constitutive=1;rank=3 chr19b_31 . CDS 94281 94301 . - 0 ID=Thaps25516;Parent=Thaps25516;rank=2 chr19b_31 . exon 94281 94301 . - . ID=Thaps25516.2;Parent=Thaps25516;constitutive=1;rank=2 chr19b_31 . CDS 94783 95008 . - 0 ID=Thaps25516;Parent=Thaps25516;rank=1 chr19b_31 . exon 94783 95008 . - . ID=Thaps25516.1;Parent=Thaps25516;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 ensembl protein_coding_gene 85867 86603 . - . ID=Thaps264623;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDL6];external_name=Thaps264623;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 85867 86603 . - . ID=Thaps264623;Parent=Thaps264623;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 85867 86603 . - 0 ID=Thaps264623;Parent=Thaps264623;rank=1 chr19b_31 . exon 85867 86603 . - . ID=Thaps264623.1;Parent=Thaps264623;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 ensembl protein_coding_gene 88792 90613 . + . ID=Thaps30478;biotype=protein_coding;description=N-acetyl-glutamate-gamma-semialdehyde dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8LDL7];external_name=HISH;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 88792 90613 . + . ID=Thaps30478;Parent=Thaps30478;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 88792 89916 . + 0 ID=Thaps30478;Parent=Thaps30478;rank=1 chr19b_31 . exon 88792 89916 . + . ID=Thaps30478.1;Parent=Thaps30478;constitutive=1;rank=1 chr19b_31 . CDS 90026 90613 . + 0 ID=Thaps30478;Parent=Thaps30478;rank=2 chr19b_31 . exon 90026 90613 . + . ID=Thaps30478.2;Parent=Thaps30478;constitutive=1;rank=2 chr19b_31 . repeat_region 100424 100587 . - . description=Harbinger1_TP chr19b_31 . repeat_region 100601 100793 . + . description=Harbinger2N_TP chr19b_31 . repeat_region 101686 101836 . - . description=TE2a_TP chr19b_31 . repeat_region 101991 102043 . ? . description=trf chr19b_31 . repeat_region 101991 102053 . ? . description=trf chr19b_31 ensembl protein_coding_gene 96531 98193 . - . ID=Thaps11294;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDL9];external_name=Thaps11294;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 96531 98193 . - . ID=Thaps11294;Parent=Thaps11294;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 96531 97470 . - 0 ID=Thaps11294;Parent=Thaps11294;rank=2 chr19b_31 . exon 96531 97470 . - . ID=Thaps11294.2;Parent=Thaps11294;constitutive=1;ensembl_end_phase=1;rank=2 chr19b_31 . CDS 97577 98193 . - 0 ID=Thaps11294;Parent=Thaps11294;rank=1 chr19b_31 . exon 97577 98193 . - . ID=Thaps11294.1;Parent=Thaps11294;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 ensembl protein_coding_gene 98608 100317 . - . ID=Thaps11295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM0];external_name=Thaps11295;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 98608 100317 . - . ID=Thaps11295;Parent=Thaps11295;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 98608 100317 . - 0 ID=Thaps11295;Parent=Thaps11295;rank=1 chr19b_31 . exon 98608 100317 . - . ID=Thaps11295.1;Parent=Thaps11295;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 102490 104796 . - . ID=Thaps11296;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM1];external_name=Thaps11296;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 102490 104796 . - . ID=Thaps11296;Parent=Thaps11296;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 102490 103019 . - 0 ID=Thaps11296;Parent=Thaps11296;rank=2 chr19b_31 . exon 102490 103019 . - . ID=Thaps11296.2;Parent=Thaps11296;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 . CDS 103257 104796 . - 0 ID=Thaps11296;Parent=Thaps11296;rank=1 chr19b_31 . exon 103257 104796 . - . ID=Thaps11296.1;Parent=Thaps11296;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 . repeat_region 104819 104867 . ? . description=dust chr19b_31 ensembl protein_coding_gene 108536 109019 . - . ID=Thaps11299;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM4];external_name=Thaps11299;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 108536 109019 . - . ID=Thaps11299;Parent=Thaps11299;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 108536 109019 . - 0 ID=Thaps11299;Parent=Thaps11299;rank=1 chr19b_31 . exon 108536 109019 . - . ID=Thaps11299.1;Parent=Thaps11299;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 ensembl protein_coding_gene 109644 113048 . + . ID=Thaps11300;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM5];external_name=Thaps11300;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 109644 113048 . + . ID=Thaps11300;Parent=Thaps11300;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 109644 112686 . + 0 ID=Thaps11300;Parent=Thaps11300;rank=1 chr19b_31 . exon 109644 112686 . + . ID=Thaps11300.1;Parent=Thaps11300;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 . CDS 112756 113048 . + 0 ID=Thaps11300;Parent=Thaps11300;rank=2 chr19b_31 . exon 112756 113048 . + . ID=Thaps11300.2;Parent=Thaps11300;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 ensembl protein_coding_gene 105580 107390 . + . ID=Thaps25517;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM2];external_name=Thaps25517;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 105580 107390 . + . ID=Thaps25517;Parent=Thaps25517;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 105580 105995 . + 0 ID=Thaps25517;Parent=Thaps25517;rank=1 chr19b_31 . exon 105580 105995 . + . ID=Thaps25517.1;Parent=Thaps25517;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 . CDS 106079 107390 . + 0 ID=Thaps25517;Parent=Thaps25517;rank=2 chr19b_31 . exon 106079 107390 . + . ID=Thaps25517.2;Parent=Thaps25517;constitutive=1;ensembl_end_phase=1;rank=2 chr19b_31 ensembl protein_coding_gene 113212 117733 . - . ID=Thaps25518;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM6];external_name=Thaps25518;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 113212 117733 . - . ID=Thaps25518;Parent=Thaps25518;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 113212 113286 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=10 chr19b_31 . exon 113212 113286 . - . ID=Thaps25518.10;Parent=Thaps25518;constitutive=1;rank=10 chr19b_31 . CDS 113306 113787 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=9 chr19b_31 . exon 113306 113787 . - . ID=Thaps25518.9;Parent=Thaps25518;constitutive=1;ensembl_end_phase=2;rank=9 chr19b_31 . CDS 113863 114424 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=8 chr19b_31 . CDS 114493 114603 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=7 chr19b_31 . CDS 114680 114890 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=6 chr19b_31 . CDS 114975 115377 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=5 chr19b_31 . CDS 115524 116910 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=4 chr19b_31 . CDS 117148 117181 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=3 chr19b_31 . CDS 117355 117589 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=2 chr19b_31 . CDS 117703 117733 . - 0 ID=Thaps25518;Parent=Thaps25518;rank=1 chr19b_31 ensembl protein_coding_gene 107859 108419 . - . ID=Thaps38331;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM3];external_name=Thaps38331;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 107859 108419 . - . ID=Thaps38331;Parent=Thaps38331;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 107859 108419 . - 0 ID=Thaps38331;Parent=Thaps38331;rank=1 chr19b_31 . exon 107859 108419 . - . ID=Thaps38331.1;Parent=Thaps38331;constitutive=1;rank=1 chr19b_31 . repeat_region 118285 118305 . ? . description=trf chr19b_31 ensembl protein_coding_gene 118846 121151 . + . ID=Thaps11302;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM7];external_name=Thaps11302;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 118846 121151 . + . ID=Thaps11302;Parent=Thaps11302;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 118846 119827 . + 0 ID=Thaps11302;Parent=Thaps11302;rank=1 chr19b_31 . exon 118846 119827 . + . ID=Thaps11302.1;Parent=Thaps11302;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 . CDS 119911 121151 . + 0 ID=Thaps11302;Parent=Thaps11302;rank=2 chr19b_31 . exon 119911 121151 . + . ID=Thaps11302.2;Parent=Thaps11302;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 ensembl protein_coding_gene 121302 122547 . - . ID=Thaps14899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM8];external_name=Thaps14899;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 121302 122547 . - . ID=Thaps14899;Parent=Thaps14899;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 121302 121523 . - 0 ID=Thaps14899;Parent=Thaps14899;rank=4 chr19b_31 . exon 121302 121523 . - . ID=Thaps14899.4;Parent=Thaps14899;constitutive=1;rank=4 chr19b_31 . CDS 121625 121821 . - 0 ID=Thaps14899;Parent=Thaps14899;rank=3 chr19b_31 . exon 121625 121821 . - . ID=Thaps14899.3;Parent=Thaps14899;constitutive=1;ensembl_end_phase=2;rank=3 chr19b_31 . CDS 121904 122251 . - 0 ID=Thaps14899;Parent=Thaps14899;rank=2 chr19b_31 . exon 121904 122251 . - . ID=Thaps14899.2;Parent=Thaps14899;constitutive=1;rank=2 chr19b_31 . CDS 122340 122547 . - 0 ID=Thaps14899;Parent=Thaps14899;rank=1 chr19b_31 . exon 122340 122547 . - . ID=Thaps14899.1;Parent=Thaps14899;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 . exon 113863 114424 . - . ID=Thaps25518.8;Parent=Thaps25518;constitutive=1;ensembl_end_phase=1;rank=8 chr19b_31 . exon 114493 114603 . - . ID=Thaps25518.7;Parent=Thaps25518;constitutive=1;rank=7 chr19b_31 . exon 114680 114890 . - . ID=Thaps25518.6;Parent=Thaps25518;constitutive=1;ensembl_end_phase=1;rank=6 chr19b_31 . exon 114975 115377 . - . ID=Thaps25518.5;Parent=Thaps25518;constitutive=1;ensembl_end_phase=1;rank=5 chr19b_31 . exon 115524 116910 . - . ID=Thaps25518.4;Parent=Thaps25518;constitutive=1;ensembl_end_phase=1;rank=4 chr19b_31 . exon 117148 117181 . - . ID=Thaps25518.3;Parent=Thaps25518;constitutive=1;ensembl_end_phase=1;rank=3 chr19b_31 . exon 117355 117589 . - . ID=Thaps25518.2;Parent=Thaps25518;constitutive=1;ensembl_end_phase=1;rank=2 chr19b_31 . exon 117703 117733 . - . ID=Thaps25518.1;Parent=Thaps25518;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 ensembl protein_coding_gene 123214 124673 . - . ID=Thaps264628;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDM9];external_name=Thaps264628;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 123214 124673 . - . ID=Thaps264628;Parent=Thaps264628;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 123214 123727 . - 0 ID=Thaps264628;Parent=Thaps264628;rank=3 chr19b_31 . exon 123214 123727 . - . ID=Thaps264628.3;Parent=Thaps264628;constitutive=1;ensembl_end_phase=1;rank=3 chr19b_31 . CDS 123869 124087 . - 0 ID=Thaps264628;Parent=Thaps264628;rank=2 chr19b_31 . CDS 124179 124673 . - 0 ID=Thaps264628;Parent=Thaps264628;rank=1 chr19b_31 ensembl protein_coding_gene 126624 127400 . + . ID=Thaps11305;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN0];external_name=Thaps11305;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 126624 127400 . + . ID=Thaps11305;Parent=Thaps11305;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 126624 126703 . + 0 ID=Thaps11305;Parent=Thaps11305;rank=1 chr19b_31 . exon 126624 126703 . + . ID=Thaps11305.1;Parent=Thaps11305;constitutive=1;ensembl_end_phase=2;rank=1 chr19b_31 . CDS 127050 127212 . + 0 ID=Thaps11305;Parent=Thaps11305;rank=2 chr19b_31 . exon 127050 127212 . + . ID=Thaps11305.2;Parent=Thaps11305;constitutive=1;ensembl_end_phase=1;rank=2 chr19b_31 . CDS 127278 127400 . + 0 ID=Thaps11305;Parent=Thaps11305;rank=3 chr19b_31 . exon 127278 127400 . + . ID=Thaps11305.3;Parent=Thaps11305;constitutive=1;rank=3 chr19b_31 ensembl protein_coding_gene 127926 128999 . - . ID=Thaps11306;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN1];external_name=Thaps11306;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 127926 128999 . - . ID=Thaps11306;Parent=Thaps11306;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 127926 128999 . - 0 ID=Thaps11306;Parent=Thaps11306;rank=1 chr19b_31 . exon 127926 128999 . - . ID=Thaps11306.1;Parent=Thaps11306;constitutive=1;rank=1 chr19b_31 ensembl protein_coding_gene 129405 132852 . + . ID=Thaps11307;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN2];external_name=Thaps11307;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 129405 132852 . + . ID=Thaps11307;Parent=Thaps11307;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 129405 130167 . + 0 ID=Thaps11307;Parent=Thaps11307;rank=1 chr19b_31 . exon 129405 130167 . + . ID=Thaps11307.1;Parent=Thaps11307;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 . CDS 130296 130646 . + 0 ID=Thaps11307;Parent=Thaps11307;rank=2 chr19b_31 . exon 130296 130646 . + . ID=Thaps11307.2;Parent=Thaps11307;constitutive=1;rank=2 chr19b_31 . CDS 130725 131274 . + 0 ID=Thaps11307;Parent=Thaps11307;rank=3 chr19b_31 . exon 130725 131274 . + . ID=Thaps11307.3;Parent=Thaps11307;constitutive=1;ensembl_end_phase=1;rank=3 chr19b_31 . CDS 131351 131415 . + 0 ID=Thaps11307;Parent=Thaps11307;rank=4 chr19b_31 . exon 131351 131415 . + . ID=Thaps11307.4;Parent=Thaps11307;constitutive=1;ensembl_end_phase=2;rank=4 chr19b_31 . CDS 131493 132580 . + 0 ID=Thaps11307;Parent=Thaps11307;rank=5 chr19b_31 . exon 131493 132580 . + . ID=Thaps11307.5;Parent=Thaps11307;constitutive=1;ensembl_end_phase=2;rank=5 chr19b_31 . CDS 132658 132852 . + 0 ID=Thaps11307;Parent=Thaps11307;rank=6 chr19b_31 . exon 132658 132852 . + . ID=Thaps11307.6;Parent=Thaps11307;constitutive=1;rank=6 chr19b_31 . exon 123869 124087 . - . ID=Thaps264628.2;Parent=Thaps264628;constitutive=1;rank=2 chr19b_31 . exon 124179 124673 . - . ID=Thaps264628.1;Parent=Thaps264628;constitutive=1;rank=1 chr19b_31 . repeat_region 135741 135754 . ? . description=dust chr19b_31 ensembl protein_coding_gene 135822 138359 . - . ID=Thaps25522;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN4];external_name=Thaps25522;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 135822 138359 . - . ID=Thaps25522;Parent=Thaps25522;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 135822 135926 . - 0 ID=Thaps25522;Parent=Thaps25522;rank=3 chr19b_31 . exon 135822 135926 . - . ID=Thaps25522.3;Parent=Thaps25522;constitutive=1;rank=3 chr19b_31 . CDS 136047 136183 . - 0 ID=Thaps25522;Parent=Thaps25522;rank=2 chr19b_31 . exon 136047 136183 . - . ID=Thaps25522.2;Parent=Thaps25522;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 . CDS 136328 138359 . - 0 ID=Thaps25522;Parent=Thaps25522;rank=1 chr19b_31 . exon 136328 138359 . - . ID=Thaps25522.1;Parent=Thaps25522;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 ensembl protein_coding_gene 138606 139789 . + . ID=Thaps25523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN5];external_name=Thaps25523;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 138606 139789 . + . ID=Thaps25523;Parent=Thaps25523;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 138606 138977 . + 0 ID=Thaps25523;Parent=Thaps25523;rank=1 chr19b_31 . exon 138606 138977 . + . ID=Thaps25523.1;Parent=Thaps25523;constitutive=1;rank=1 chr19b_31 . CDS 139079 139789 . + 0 ID=Thaps25523;Parent=Thaps25523;rank=2 chr19b_31 . exon 139079 139789 . + . ID=Thaps25523.2;Parent=Thaps25523;constitutive=1;rank=2 chr19b_31 ensembl protein_coding_gene 132976 134152 . - . ID=Thaps264631;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN3];external_name=Thaps264631;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 132976 134152 . - . ID=Thaps264631;Parent=Thaps264631;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 132976 133767 . - 0 ID=Thaps264631;Parent=Thaps264631;rank=2 chr19b_31 . exon 132976 133767 . - . ID=Thaps264631.2;Parent=Thaps264631;constitutive=1;rank=2 chr19b_31 . CDS 133862 134152 . - 0 ID=Thaps264631;Parent=Thaps264631;rank=1 chr19b_31 . exon 133862 134152 . - . ID=Thaps264631.1;Parent=Thaps264631;constitutive=1;rank=1 chr19b_31 ensembl gene 140692 143721 . + . ID=Thaps264632;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 140692 143721 . + . ID=Thaps264632;Parent=Thaps264632;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr19b_31 . exon 140692 140902 . + . ID=Thaps264632.1;Parent=Thaps264632;constitutive=1;ensembl_end_phase=1;rank=1 chr19b_31 . exon 140933 141024 . + . ID=Thaps264632.2;Parent=Thaps264632;constitutive=1;ensembl_end_phase=2;rank=2 chr19b_31 . exon 141122 141341 . + . ID=Thaps264632.3;Parent=Thaps264632;constitutive=1;ensembl_end_phase=1;rank=3 chr19b_31 . exon 141399 141543 . + . ID=Thaps264632.4;Parent=Thaps264632;constitutive=1;ensembl_end_phase=1;rank=4 chr19b_31 . exon 141624 141891 . + . ID=Thaps264632.5;Parent=Thaps264632;constitutive=1;ensembl_end_phase=1;rank=5 chr19b_31 . exon 141925 142013 . + . ID=Thaps264632.6;Parent=Thaps264632;constitutive=1;ensembl_end_phase=2;rank=6 chr19b_31 . exon 142047 142690 . + . ID=Thaps264632.7;Parent=Thaps264632;constitutive=1;ensembl_end_phase=2;rank=7 chr19b_31 ensembl protein_coding_gene 145945 147973 . + . ID=Thaps11312;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN6];external_name=Thaps11312;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 145945 147973 . + . ID=Thaps11312;Parent=Thaps11312;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 145945 146592 . + 0 ID=Thaps11312;Parent=Thaps11312;rank=1 chr19b_31 . exon 145945 146592 . + . ID=Thaps11312.1;Parent=Thaps11312;constitutive=1;rank=1 chr19b_31 . CDS 146615 147973 . + 0 ID=Thaps11312;Parent=Thaps11312;rank=2 chr19b_31 . exon 146615 147973 . + . ID=Thaps11312.2;Parent=Thaps11312;constitutive=1;rank=2 chr19b_31 ensembl protein_coding_gene 150791 151606 . + . ID=Thaps11314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN8];external_name=Thaps11314;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 150791 151606 . + . ID=Thaps11314;Parent=Thaps11314;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 150791 151606 . + 0 ID=Thaps11314;Parent=Thaps11314;rank=1 chr19b_31 . exon 150791 151606 . + . ID=Thaps11314.1;Parent=Thaps11314;constitutive=1;rank=1 chr19b_31 . exon 142784 143026 . + . ID=Thaps264632.8;Parent=Thaps264632;constitutive=1;rank=8 chr19b_31 . exon 143084 143296 . + . ID=Thaps264632.9;Parent=Thaps264632;constitutive=1;rank=9 chr19b_31 . exon 143388 143721 . + . ID=Thaps264632.10;Parent=Thaps264632;constitutive=1;ensembl_end_phase=1;rank=10 chr19b_31 ensembl protein_coding_gene 148404 149524 . + . ID=Thaps264633;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN7];external_name=Thaps264633;logic_name=jgi_thaps3 chr19b_31 ensembl transcript 148404 149524 . + . ID=Thaps264633;Parent=Thaps264633;biotype=protein_coding;logic_name=jgi_thaps3 chr19b_31 . CDS 148404 149524 . + 0 ID=Thaps264633;Parent=Thaps264633;rank=1 chr19b_31 . exon 148404 149524 . + . ID=Thaps264633.1;Parent=Thaps264633;constitutive=1;ensembl_end_phase=2;rank=1 ##gff-version 3 ##sequence-region 16b 1 169376 chr16b . repeat_region 2129 2176 . ? . description=dust chr16b . repeat_region 2129 2179 . ? . description=trf chr16b ensembl protein_coding_gene 97 4450 . + . ID=Thaps10482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS6];external_name=Thaps10482;logic_name=jgi_thaps3 chr16b ensembl transcript 97 4450 . + . ID=Thaps10482;Parent=Thaps10482;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 97 286 . + 0 ID=Thaps10482;Parent=Thaps10482;rank=1 chr16b . exon 97 286 . + . ID=Thaps10482.1;Parent=Thaps10482;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . CDS 371 1563 . + 0 ID=Thaps10482;Parent=Thaps10482;rank=2 chr16b . exon 371 1563 . + . ID=Thaps10482.2;Parent=Thaps10482;constitutive=1;ensembl_end_phase=2;rank=2 chr16b . CDS 1637 2284 . + 0 ID=Thaps10482;Parent=Thaps10482;rank=3 chr16b . exon 1637 2284 . + . ID=Thaps10482.3;Parent=Thaps10482;constitutive=1;rank=3 chr16b . CDS 2354 2606 . + 0 ID=Thaps10482;Parent=Thaps10482;rank=4 chr16b . exon 2354 2606 . + . ID=Thaps10482.4;Parent=Thaps10482;constitutive=1;ensembl_end_phase=1;rank=4 chr16b . CDS 2652 4450 . + 0 ID=Thaps10482;Parent=Thaps10482;rank=5 chr16b . exon 2652 4450 . + . ID=Thaps10482.5;Parent=Thaps10482;constitutive=1;ensembl_end_phase=2;rank=5 chr16b ensembl protein_coding_gene 5891 6181 . + . ID=Thaps25170;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS7];external_name=Thaps25170;logic_name=jgi_thaps3 chr16b ensembl transcript 5891 6181 . + . ID=Thaps25170;Parent=Thaps25170;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 5891 6070 . + 0 ID=Thaps25170;Parent=Thaps25170;rank=1 chr16b . exon 5891 6070 . + . ID=Thaps25170.1;Parent=Thaps25170;constitutive=1;rank=1 chr16b . CDS 6119 6181 . + 0 ID=Thaps25170;Parent=Thaps25170;rank=2 chr16b . exon 6119 6181 . + . ID=Thaps25170.2;Parent=Thaps25170;constitutive=1;rank=2 chr16b ensembl protein_coding_gene 7870 9330 . - . ID=Thaps25171;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS8];external_name=Thaps25171;logic_name=jgi_thaps3 chr16b ensembl transcript 7870 9330 . - . ID=Thaps25171;Parent=Thaps25171;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 7870 9330 . - 0 ID=Thaps25171;Parent=Thaps25171;rank=1 chr16b . exon 7870 9330 . - . ID=Thaps25171.1;Parent=Thaps25171;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 10936 12095 . + . ID=Thaps10485;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS9];external_name=Thaps10485;logic_name=jgi_thaps3 chr16b ensembl transcript 10936 12095 . + . ID=Thaps10485;Parent=Thaps10485;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 10936 11037 . + 0 ID=Thaps10485;Parent=Thaps10485;rank=1 chr16b . exon 10936 11037 . + . ID=Thaps10485.1;Parent=Thaps10485;constitutive=1;rank=1 chr16b . CDS 11114 11334 . + 0 ID=Thaps10485;Parent=Thaps10485;rank=2 chr16b . exon 11114 11334 . + . ID=Thaps10485.2;Parent=Thaps10485;constitutive=1;ensembl_end_phase=2;rank=2 chr16b . CDS 11765 12095 . + 0 ID=Thaps10485;Parent=Thaps10485;rank=3 chr16b . exon 11765 12095 . + . ID=Thaps10485.3;Parent=Thaps10485;constitutive=1;ensembl_end_phase=1;rank=3 chr16b ensembl protein_coding_gene 14151 15904 . - . ID=Thaps10487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCT1];external_name=Thaps10487;logic_name=jgi_thaps3 chr16b ensembl transcript 14151 15904 . - . ID=Thaps10487;Parent=Thaps10487;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 14151 15075 . - 0 ID=Thaps10487;Parent=Thaps10487;rank=2 chr16b . exon 14151 15075 . - . ID=Thaps10487.2;Parent=Thaps10487;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 15147 15904 . - 0 ID=Thaps10487;Parent=Thaps10487;rank=1 chr16b . exon 15147 15904 . - . ID=Thaps10487.1;Parent=Thaps10487;constitutive=1;ensembl_end_phase=2;rank=1 chr16b ensembl protein_coding_gene 12500 14058 . + . ID=Thaps25172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCT0];external_name=Thaps25172;logic_name=jgi_thaps3 chr16b ensembl transcript 12500 14058 . + . ID=Thaps25172;Parent=Thaps25172;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 12500 13361 . + 0 ID=Thaps25172;Parent=Thaps25172;rank=1 chr16b . exon 12500 13361 . + . ID=Thaps25172.1;Parent=Thaps25172;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . CDS 13449 13562 . + 0 ID=Thaps25172;Parent=Thaps25172;rank=2 chr16b . exon 13449 13562 . + . ID=Thaps25172.2;Parent=Thaps25172;constitutive=1;rank=2 chr16b . CDS 13644 13981 . + 0 ID=Thaps25172;Parent=Thaps25172;rank=3 chr16b . exon 13644 13981 . + . ID=Thaps25172.3;Parent=Thaps25172;constitutive=1;ensembl_end_phase=2;rank=3 chr16b . CDS 14029 14058 . + 0 ID=Thaps25172;Parent=Thaps25172;rank=4 chr16b . exon 14029 14058 . + . ID=Thaps25172.4;Parent=Thaps25172;constitutive=1;rank=4 chr16b . repeat_region 20700 21396 . + . description=TE1A_TP chr16b . repeat_region 21396 21672 . + . description=TE1A_TP chr16b . repeat_region 22720 22746 . ? . description=dust chr16b . repeat_region 24331 24338 . ? . description=dust chr16b . repeat_region 28362 28394 . ? . description=trf chr16b ensembl protein_coding_gene 19960 20568 . - . ID=Thaps10488;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCT2];external_name=Thaps10488;logic_name=jgi_thaps3 chr16b ensembl transcript 19960 20568 . - . ID=Thaps10488;Parent=Thaps10488;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 19960 20568 . - 0 ID=Thaps10488;Parent=Thaps10488;rank=1 chr16b . exon 19960 20568 . - . ID=Thaps10488.1;Parent=Thaps10488;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 25462 27534 . - . ID=Thaps10490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCT4];external_name=Thaps10490;logic_name=jgi_thaps3 chr16b ensembl transcript 25462 27534 . - . ID=Thaps10490;Parent=Thaps10490;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 25462 27534 . - 0 ID=Thaps10490;Parent=Thaps10490;rank=1 chr16b . exon 25462 27534 . - . ID=Thaps10490.1;Parent=Thaps10490;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 22546 23520 . + . ID=Thaps25173;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCT3];external_name=Thaps25173;logic_name=jgi_thaps3 chr16b ensembl transcript 22546 23520 . + . ID=Thaps25173;Parent=Thaps25173;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 22546 23520 . + 0 ID=Thaps25173;Parent=Thaps25173;rank=1 chr16b . exon 22546 23520 . + . ID=Thaps25173.1;Parent=Thaps25173;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 35028 36084 . - . ID=Thaps10493;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCT7];external_name=Thaps10493;logic_name=jgi_thaps3 chr16b ensembl transcript 35028 36084 . - . ID=Thaps10493;Parent=Thaps10493;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 35028 35117 . - 0 ID=Thaps10493;Parent=Thaps10493;rank=3 chr16b . exon 35028 35117 . - . ID=Thaps10493.3;Parent=Thaps10493;constitutive=1;rank=3 chr16b . CDS 35570 35992 . - 0 ID=Thaps10493;Parent=Thaps10493;rank=2 chr16b . exon 35570 35992 . - . ID=Thaps10493.2;Parent=Thaps10493;constitutive=1;rank=2 chr16b . CDS 36049 36084 . - 0 ID=Thaps10493;Parent=Thaps10493;rank=1 chr16b . exon 36049 36084 . - . ID=Thaps10493.1;Parent=Thaps10493;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 36733 38965 . + . ID=Thaps25177;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCT8];external_name=NTT3;logic_name=jgi_thaps3 chr16b ensembl transcript 36733 38965 . + . ID=Thaps25177;Parent=Thaps25177;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 36733 37530 . + 0 ID=Thaps25177;Parent=Thaps25177;rank=1 chr16b . exon 36733 37530 . + . ID=Thaps25177.1;Parent=Thaps25177;constitutive=1;rank=1 chr16b . CDS 37560 37730 . + 0 ID=Thaps25177;Parent=Thaps25177;rank=2 chr16b . exon 37560 37730 . + . ID=Thaps25177.2;Parent=Thaps25177;constitutive=1;rank=2 chr16b . CDS 37811 38965 . + 0 ID=Thaps25177;Parent=Thaps25177;rank=3 chr16b . exon 37811 38965 . + . ID=Thaps25177.3;Parent=Thaps25177;constitutive=1;rank=3 chr16b ensembl protein_coding_gene 33629 34758 . + . ID=Thaps264391;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCT6];external_name=Thaps264391;logic_name=jgi_thaps3 chr16b ensembl transcript 33629 34758 . + . ID=Thaps264391;Parent=Thaps264391;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 33629 34217 . + 0 ID=Thaps264391;Parent=Thaps264391;rank=1 chr16b . exon 33629 34217 . + . ID=Thaps264391.1;Parent=Thaps264391;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . CDS 34406 34525 . + 0 ID=Thaps264391;Parent=Thaps264391;rank=2 chr16b . exon 34406 34525 . + . ID=Thaps264391.2;Parent=Thaps264391;constitutive=1;rank=2 chr16b . CDS 34628 34758 . + 0 ID=Thaps264391;Parent=Thaps264391;rank=3 chr16b . exon 34628 34758 . + . ID=Thaps264391.3;Parent=Thaps264391;constitutive=1;ensembl_end_phase=2;rank=3 chr16b ensembl protein_coding_gene 39702 40001 . - . ID=Thaps37830;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCT9];external_name=Thaps37830;logic_name=jgi_thaps3 chr16b ensembl transcript 39702 40001 . - . ID=Thaps37830;Parent=Thaps37830;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 39702 40001 . - 0 ID=Thaps37830;Parent=Thaps37830;rank=1 chr16b . exon 39702 40001 . - . ID=Thaps37830.1;Parent=Thaps37830;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 31238 32501 . + . ID=Thaps37834;biotype=protein_coding;description=V-type h-atpase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8LCT5];external_name=Thaps37834;logic_name=jgi_thaps3 chr16b ensembl transcript 31238 32501 . + . ID=Thaps37834;Parent=Thaps37834;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 31238 31315 . + 0 ID=Thaps37834;Parent=Thaps37834;rank=1 chr16b . exon 31238 31315 . + . ID=Thaps37834.1;Parent=Thaps37834;constitutive=1;rank=1 chr16b . CDS 31787 31993 . + 0 ID=Thaps37834;Parent=Thaps37834;rank=2 chr16b . exon 31787 31993 . + . ID=Thaps37834.2;Parent=Thaps37834;constitutive=1;rank=2 chr16b . CDS 32095 32178 . + 0 ID=Thaps37834;Parent=Thaps37834;rank=3 chr16b . exon 32095 32178 . + . ID=Thaps37834.3;Parent=Thaps37834;constitutive=1;rank=3 chr16b . CDS 32257 32333 . + 0 ID=Thaps37834;Parent=Thaps37834;rank=4 chr16b . exon 32257 32333 . + . ID=Thaps37834.4;Parent=Thaps37834;constitutive=1;ensembl_end_phase=2;rank=4 chr16b . CDS 32444 32501 . + 0 ID=Thaps37834;Parent=Thaps37834;rank=5 chr16b . exon 32444 32501 . + . ID=Thaps37834.5;Parent=Thaps37834;constitutive=1;ensembl_end_phase=1;rank=5 chr16b . repeat_region 42000 42061 . ? . description=dust chr16b . repeat_region 42028 42059 . ? . description=trf chr16b . repeat_region 42712 42849 . - . description=Copia7I_TP chr16b . repeat_region 43173 43241 . ? . description=trf chr16b ensembl protein_coding_gene 44021 44788 . + . ID=Thaps10497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCU1];external_name=Thaps10497;logic_name=jgi_thaps3 chr16b ensembl transcript 44021 44788 . + . ID=Thaps10497;Parent=Thaps10497;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 44021 44788 . + 0 ID=Thaps10497;Parent=Thaps10497;rank=1 chr16b . exon 44021 44788 . + . ID=Thaps10497.1;Parent=Thaps10497;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 45042 45683 . - . ID=Thaps10498;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCU2];external_name=Thaps10498;logic_name=jgi_thaps3 chr16b ensembl transcript 45042 45683 . - . ID=Thaps10498;Parent=Thaps10498;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 45042 45683 . - 0 ID=Thaps10498;Parent=Thaps10498;rank=1 chr16b . exon 45042 45683 . - . ID=Thaps10498.1;Parent=Thaps10498;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 46242 47366 . + . ID=Thaps10499;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCU3];external_name=Thaps10499;logic_name=jgi_thaps3 chr16b ensembl transcript 46242 47366 . + . ID=Thaps10499;Parent=Thaps10499;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 46242 47366 . + 0 ID=Thaps10499;Parent=Thaps10499;rank=1 chr16b . exon 46242 47366 . + . ID=Thaps10499.1;Parent=Thaps10499;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 47594 49130 . - . ID=Thaps10501;biotype=protein_coding;description=Probable microsomal delta-5 desaturase [Source:UniProtKB/TrEMBL%3BAcc:B8LCU4];external_name=DES2;logic_name=jgi_thaps3 chr16b ensembl transcript 47594 49130 . - . ID=Thaps10501;Parent=Thaps10501;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 47594 48808 . - 0 ID=Thaps10501;Parent=Thaps10501;rank=2 chr16b . exon 47594 48808 . - . ID=Thaps10501.2;Parent=Thaps10501;constitutive=1;rank=2 chr16b . CDS 48897 49130 . - 0 ID=Thaps10501;Parent=Thaps10501;rank=1 chr16b . exon 48897 49130 . - . ID=Thaps10501.1;Parent=Thaps10501;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 41330 42445 . + . ID=Thaps25179;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCU0];external_name=Thaps25179;logic_name=jgi_thaps3 chr16b ensembl transcript 41330 42445 . + . ID=Thaps25179;Parent=Thaps25179;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 41330 42445 . + 0 ID=Thaps25179;Parent=Thaps25179;rank=1 chr16b . exon 41330 42445 . + . ID=Thaps25179.1;Parent=Thaps25179;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 49784 50919 . - . ID=Thaps264395;biotype=protein_coding;description=Phosphatidylinositol 3-kinase [Source:UniProtKB/TrEMBL%3BAcc:B8LCU5];external_name=Thaps264395;logic_name=jgi_thaps3 chr16b ensembl transcript 49784 50919 . - . ID=Thaps264395;Parent=Thaps264395;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 49784 50120 . - 0 ID=Thaps264395;Parent=Thaps264395;rank=4 chr16b . exon 49784 50120 . - . ID=Thaps264395.4;Parent=Thaps264395;constitutive=1;ensembl_end_phase=1;rank=4 chr16b . CDS 50192 50304 . - 0 ID=Thaps264395;Parent=Thaps264395;rank=3 chr16b . CDS 50392 50505 . - 0 ID=Thaps264395;Parent=Thaps264395;rank=2 chr16b . CDS 50707 50919 . - 0 ID=Thaps264395;Parent=Thaps264395;rank=1 chr16b . exon 50192 50304 . - . ID=Thaps264395.3;Parent=Thaps264395;constitutive=1;ensembl_end_phase=2;rank=3 chr16b . exon 50392 50505 . - . ID=Thaps264395.2;Parent=Thaps264395;constitutive=1;rank=2 chr16b . exon 50707 50919 . - . ID=Thaps264395.1;Parent=Thaps264395;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 56250 56761 . + . ID=Thaps264396;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCU6];external_name=Thaps264396;logic_name=jgi_thaps3 chr16b ensembl transcript 56250 56761 . + . ID=Thaps264396;Parent=Thaps264396;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 56250 56596 . + 0 ID=Thaps264396;Parent=Thaps264396;rank=1 chr16b . exon 56250 56596 . + . ID=Thaps264396.1;Parent=Thaps264396;constitutive=1;ensembl_end_phase=2;rank=1 chr16b . CDS 56686 56761 . + 0 ID=Thaps264396;Parent=Thaps264396;rank=2 chr16b . exon 56686 56761 . + . ID=Thaps264396.2;Parent=Thaps264396;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . repeat_region 63935 63942 . ? . description=dust chr16b . repeat_region 64365 64407 . ? . description=dust chr16b . biological_region 64404 64408 0.999 - . logic_name=eponine chr16b . repeat_region 66027 66045 . ? . description=dust chr16b . repeat_region 67433 67524 . ? . description=trf chr16b ensembl protein_coding_gene 62723 63885 . + . ID=Thaps10506;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCU8];external_name=Thaps10506;logic_name=jgi_thaps3 chr16b ensembl transcript 62723 63885 . + . ID=Thaps10506;Parent=Thaps10506;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 62723 63719 . + 0 ID=Thaps10506;Parent=Thaps10506;rank=1 chr16b . exon 62723 63719 . + . ID=Thaps10506.1;Parent=Thaps10506;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . CDS 63827 63885 . + 0 ID=Thaps10506;Parent=Thaps10506;rank=2 chr16b . exon 63827 63885 . + . ID=Thaps10506.2;Parent=Thaps10506;constitutive=1;ensembl_end_phase=2;rank=2 chr16b ensembl protein_coding_gene 68435 69775 . - . ID=Thaps10509;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCV1];external_name=Thaps10509;logic_name=jgi_thaps3 chr16b ensembl transcript 68435 69775 . - . ID=Thaps10509;Parent=Thaps10509;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 68435 69775 . - 0 ID=Thaps10509;Parent=Thaps10509;rank=1 chr16b . exon 68435 69775 . - . ID=Thaps10509.1;Parent=Thaps10509;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 60316 62346 . + . ID=Thaps25181;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCU7];external_name=Thaps25181;logic_name=jgi_thaps3 chr16b ensembl transcript 60316 62346 . + . ID=Thaps25181;Parent=Thaps25181;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 60316 62346 . + 0 ID=Thaps25181;Parent=Thaps25181;rank=1 chr16b . exon 60316 62346 . + . ID=Thaps25181.1;Parent=Thaps25181;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 64170 64700 . - . ID=Thaps25182;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCU9];external_name=Thaps25182;logic_name=jgi_thaps3 chr16b ensembl transcript 64170 64700 . - . ID=Thaps25182;Parent=Thaps25182;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 64170 64581 . - 0 ID=Thaps25182;Parent=Thaps25182;rank=2 chr16b . exon 64170 64581 . - . ID=Thaps25182.2;Parent=Thaps25182;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 64648 64700 . - 0 ID=Thaps25182;Parent=Thaps25182;rank=1 chr16b . exon 64648 64700 . - . ID=Thaps25182.1;Parent=Thaps25182;constitutive=1;ensembl_end_phase=2;rank=1 chr16b ensembl protein_coding_gene 65027 67091 . + . ID=Thaps25183;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCV0];external_name=Thaps25183;logic_name=jgi_thaps3 chr16b ensembl transcript 65027 67091 . + . ID=Thaps25183;Parent=Thaps25183;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 65027 65663 . + 0 ID=Thaps25183;Parent=Thaps25183;rank=1 chr16b . exon 65027 65663 . + . ID=Thaps25183.1;Parent=Thaps25183;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . CDS 65761 67091 . + 0 ID=Thaps25183;Parent=Thaps25183;rank=2 chr16b . exon 65761 67091 . + . ID=Thaps25183.2;Parent=Thaps25183;constitutive=1;ensembl_end_phase=2;rank=2 chr16b . repeat_region 70336 70401 . - . description=Copia8LTR_TP chr16b ensembl protein_coding_gene 70451 70977 . - . ID=Thaps10510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCV2];external_name=Thaps10510;logic_name=jgi_thaps3 chr16b ensembl transcript 70451 70977 . - . ID=Thaps10510;Parent=Thaps10510;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 70451 70592 . - 0 ID=Thaps10510;Parent=Thaps10510;rank=2 chr16b . exon 70451 70592 . - . ID=Thaps10510.2;Parent=Thaps10510;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 70673 70977 . - 0 ID=Thaps10510;Parent=Thaps10510;rank=1 chr16b . exon 70673 70977 . - . ID=Thaps10510.1;Parent=Thaps10510;constitutive=1;ensembl_end_phase=2;rank=1 chr16b ensembl protein_coding_gene 79208 80782 . + . ID=Thaps37838;biotype=protein_coding;description=Carboxypeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8LCV3];external_name=Thaps37838;logic_name=jgi_thaps3 chr16b ensembl transcript 79208 80782 . + . ID=Thaps37838;Parent=Thaps37838;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 79208 80782 . + 0 ID=Thaps37838;Parent=Thaps37838;rank=1 chr16b . exon 79208 80782 . + . ID=Thaps37838.1;Parent=Thaps37838;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 80856 82116 . - . ID=Thaps25187;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCV4];external_name=Thaps25187;logic_name=jgi_thaps3 chr16b ensembl transcript 80856 82116 . - . ID=Thaps25187;Parent=Thaps25187;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 80856 81317 . - 0 ID=Thaps25187;Parent=Thaps25187;rank=4 chr16b . exon 80856 81317 . - . ID=Thaps25187.4;Parent=Thaps25187;constitutive=1;rank=4 chr16b . CDS 81393 81502 . - 0 ID=Thaps25187;Parent=Thaps25187;rank=3 chr16b . exon 81393 81502 . - . ID=Thaps25187.3;Parent=Thaps25187;constitutive=1;ensembl_end_phase=2;rank=3 chr16b . CDS 81576 81674 . - 0 ID=Thaps25187;Parent=Thaps25187;rank=2 chr16b . exon 81576 81674 . - . ID=Thaps25187.2;Parent=Thaps25187;constitutive=1;rank=2 chr16b . CDS 81756 82116 . - 0 ID=Thaps25187;Parent=Thaps25187;rank=1 chr16b . exon 81756 82116 . - . ID=Thaps25187.1;Parent=Thaps25187;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . biological_region 95028 95030 0.999 + . logic_name=eponine chr16b . repeat_region 95436 95448 . ? . description=dust chr16b . repeat_region 97246 97323 . - . description=TE2c_TP chr16b . repeat_region 98735 98752 . ? . description=dust chr16b ensembl protein_coding_gene 96106 96933 . - . ID=Thaps10515;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCV6];external_name=Thaps10515;logic_name=jgi_thaps3 chr16b ensembl transcript 96106 96933 . - . ID=Thaps10515;Parent=Thaps10515;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 96106 96933 . - 0 ID=Thaps10515;Parent=Thaps10515;rank=1 chr16b . exon 96106 96933 . - . ID=Thaps10515.1;Parent=Thaps10515;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 94375 95503 . + . ID=Thaps25188;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCV5];external_name=Thaps25188;logic_name=jgi_thaps3 chr16b ensembl transcript 94375 95503 . + . ID=Thaps25188;Parent=Thaps25188;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 94375 94505 . + 0 ID=Thaps25188;Parent=Thaps25188;rank=1 chr16b . exon 94375 94505 . + . ID=Thaps25188.1;Parent=Thaps25188;constitutive=1;ensembl_end_phase=2;rank=1 chr16b . CDS 94719 94797 . + 0 ID=Thaps25188;Parent=Thaps25188;rank=2 chr16b . exon 94719 94797 . + . ID=Thaps25188.2;Parent=Thaps25188;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 94874 95503 . + 0 ID=Thaps25188;Parent=Thaps25188;rank=3 chr16b . exon 94874 95503 . + . ID=Thaps25188.3;Parent=Thaps25188;constitutive=1;rank=3 chr16b ensembl protein_coding_gene 97655 99089 . - . ID=Thaps25189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCV7];external_name=Thaps25189;logic_name=jgi_thaps3 chr16b ensembl transcript 97655 99089 . - . ID=Thaps25189;Parent=Thaps25189;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 97655 98708 . - 0 ID=Thaps25189;Parent=Thaps25189;rank=2 chr16b . exon 97655 98708 . - . ID=Thaps25189.2;Parent=Thaps25189;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 98932 99089 . - 0 ID=Thaps25189;Parent=Thaps25189;rank=1 chr16b . exon 98932 99089 . - . ID=Thaps25189.1;Parent=Thaps25189;constitutive=1;ensembl_end_phase=2;rank=1 chr16b . repeat_region 106121 106140 . ? . description=trf chr16b . repeat_region 108704 108754 . ? . description=trf chr16b . repeat_region 108816 108839 . ? . description=trf chr16b . repeat_region 108888 108919 . ? . description=trf chr16b ensembl protein_coding_gene 99830 100734 . + . ID=Thaps10517;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCV8];external_name=Thaps10517;logic_name=jgi_thaps3 chr16b ensembl transcript 99830 100734 . + . ID=Thaps10517;Parent=Thaps10517;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 99830 100548 . + 0 ID=Thaps10517;Parent=Thaps10517;rank=1 chr16b . exon 99830 100548 . + . ID=Thaps10517.1;Parent=Thaps10517;constitutive=1;ensembl_end_phase=2;rank=1 chr16b . CDS 100647 100734 . + 0 ID=Thaps10517;Parent=Thaps10517;rank=2 chr16b . exon 100647 100734 . + . ID=Thaps10517.2;Parent=Thaps10517;constitutive=1;ensembl_end_phase=1;rank=2 chr16b ensembl protein_coding_gene 101292 102340 . + . ID=Thaps10518;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCV9];external_name=Thaps10518;logic_name=jgi_thaps3 chr16b ensembl transcript 101292 102340 . + . ID=Thaps10518;Parent=Thaps10518;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 101292 102064 . + 0 ID=Thaps10518;Parent=Thaps10518;rank=1 chr16b . exon 101292 102064 . + . ID=Thaps10518.1;Parent=Thaps10518;constitutive=1;ensembl_end_phase=2;rank=1 chr16b . CDS 102178 102340 . + 0 ID=Thaps10518;Parent=Thaps10518;rank=2 chr16b . exon 102178 102340 . + . ID=Thaps10518.2;Parent=Thaps10518;constitutive=1;ensembl_end_phase=1;rank=2 chr16b ensembl protein_coding_gene 103617 104692 . - . ID=Thaps10519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW0];external_name=Thaps10519;logic_name=jgi_thaps3 chr16b ensembl transcript 103617 104692 . - . ID=Thaps10519;Parent=Thaps10519;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 103617 103700 . - 0 ID=Thaps10519;Parent=Thaps10519;rank=4 chr16b . exon 103617 103700 . - . ID=Thaps10519.4;Parent=Thaps10519;constitutive=1;rank=4 chr16b . CDS 103799 103998 . - 0 ID=Thaps10519;Parent=Thaps10519;rank=3 chr16b . exon 103799 103998 . - . ID=Thaps10519.3;Parent=Thaps10519;constitutive=1;ensembl_end_phase=2;rank=3 chr16b . CDS 104078 104342 . - 0 ID=Thaps10519;Parent=Thaps10519;rank=2 chr16b . exon 104078 104342 . - . ID=Thaps10519.2;Parent=Thaps10519;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 104447 104692 . - 0 ID=Thaps10519;Parent=Thaps10519;rank=1 chr16b . exon 104447 104692 . - . ID=Thaps10519.1;Parent=Thaps10519;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 108222 109028 . - . ID=Thaps10521;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW2];external_name=Thaps10521;logic_name=jgi_thaps3 chr16b ensembl transcript 108222 109028 . - . ID=Thaps10521;Parent=Thaps10521;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 108222 108285 . - 0 ID=Thaps10521;Parent=Thaps10521;rank=2 chr16b . exon 108222 108285 . - . ID=Thaps10521.2;Parent=Thaps10521;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 108403 109028 . - 0 ID=Thaps10521;Parent=Thaps10521;rank=1 chr16b . exon 108403 109028 . - . ID=Thaps10521.1;Parent=Thaps10521;constitutive=1;ensembl_end_phase=2;rank=1 chr16b ensembl protein_coding_gene 107148 107844 . - . ID=Thaps25190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW1];external_name=Thaps25190;logic_name=jgi_thaps3 chr16b ensembl transcript 107148 107844 . - . ID=Thaps25190;Parent=Thaps25190;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 107148 107211 . - 0 ID=Thaps25190;Parent=Thaps25190;rank=2 chr16b . exon 107148 107211 . - . ID=Thaps25190.2;Parent=Thaps25190;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 107381 107844 . - 0 ID=Thaps25190;Parent=Thaps25190;rank=1 chr16b . exon 107381 107844 . - . ID=Thaps25190.1;Parent=Thaps25190;constitutive=1;ensembl_end_phase=2;rank=1 chr16b ensembl gene 109473 110402 . + . ID=Thaps264399;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr16b ensembl transcript 109473 110402 . + . ID=Thaps264399;Parent=Thaps264399;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr16b . exon 109473 109845 . + . ID=Thaps264399.1;Parent=Thaps264399;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . repeat_region 114838 114859 . ? . description=dust chr16b ensembl protein_coding_gene 115740 117881 . + . ID=Thaps10523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW4];external_name=Thaps10523;logic_name=jgi_thaps3 chr16b ensembl transcript 115740 117881 . + . ID=Thaps10523;Parent=Thaps10523;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 115740 115798 . + 0 ID=Thaps10523;Parent=Thaps10523;rank=1 chr16b . exon 115740 115798 . + . ID=Thaps10523.1;Parent=Thaps10523;constitutive=1;ensembl_end_phase=2;rank=1 chr16b . CDS 115864 116386 . + 0 ID=Thaps10523;Parent=Thaps10523;rank=2 chr16b . exon 115864 116386 . + . ID=Thaps10523.2;Parent=Thaps10523;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 116472 117881 . + 0 ID=Thaps10523;Parent=Thaps10523;rank=3 chr16b . exon 116472 117881 . + . ID=Thaps10523.3;Parent=Thaps10523;constitutive=1;rank=3 chr16b ensembl protein_coding_gene 118878 120541 . - . ID=Thaps10524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW5];external_name=Thaps10524;logic_name=jgi_thaps3 chr16b ensembl transcript 118878 120541 . - . ID=Thaps10524;Parent=Thaps10524;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 118878 118960 . - 0 ID=Thaps10524;Parent=Thaps10524;rank=4 chr16b . exon 118878 118960 . - . ID=Thaps10524.4;Parent=Thaps10524;constitutive=1;ensembl_end_phase=2;rank=4 chr16b . CDS 119229 119396 . - 0 ID=Thaps10524;Parent=Thaps10524;rank=3 chr16b . exon 119229 119396 . - . ID=Thaps10524.3;Parent=Thaps10524;constitutive=1;rank=3 chr16b . CDS 119481 119898 . - 0 ID=Thaps10524;Parent=Thaps10524;rank=2 chr16b . exon 119481 119898 . - . ID=Thaps10524.2;Parent=Thaps10524;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 120014 120541 . - 0 ID=Thaps10524;Parent=Thaps10524;rank=1 chr16b . exon 109939 110078 . + . ID=Thaps264399.2;Parent=Thaps264399;constitutive=1;ensembl_end_phase=2;rank=2 chr16b . exon 110097 110402 . + . ID=Thaps264399.3;Parent=Thaps264399;constitutive=1;rank=3 chr16b ensembl protein_coding_gene 113060 113739 . - . ID=Thaps37824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW3];external_name=Thaps37824;logic_name=jgi_thaps3 chr16b ensembl transcript 113060 113739 . - . ID=Thaps37824;Parent=Thaps37824;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 113060 113096 . - 0 ID=Thaps37824;Parent=Thaps37824;rank=3 chr16b . exon 113060 113096 . - . ID=Thaps37824.3;Parent=Thaps37824;constitutive=1;ensembl_end_phase=1;rank=3 chr16b . CDS 113206 113237 . - 0 ID=Thaps37824;Parent=Thaps37824;rank=2 chr16b . exon 113206 113237 . - . ID=Thaps37824.2;Parent=Thaps37824;constitutive=1;ensembl_end_phase=2;rank=2 chr16b . CDS 113326 113739 . - 0 ID=Thaps37824;Parent=Thaps37824;rank=1 chr16b . exon 113326 113739 . - . ID=Thaps37824.1;Parent=Thaps37824;constitutive=1;rank=1 chr16b . repeat_region 129055 129091 . ? . description=trf chr16b . exon 120014 120541 . - . ID=Thaps10524.1;Parent=Thaps10524;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 121353 124683 . + . ID=Thaps10525;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW6];external_name=Thaps10525;logic_name=jgi_thaps3 chr16b ensembl transcript 121353 124683 . + . ID=Thaps10525;Parent=Thaps10525;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 121353 122754 . + 0 ID=Thaps10525;Parent=Thaps10525;rank=1 chr16b . exon 121353 122754 . + . ID=Thaps10525.1;Parent=Thaps10525;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . CDS 123023 124683 . + 0 ID=Thaps10525;Parent=Thaps10525;rank=2 chr16b . exon 123023 124683 . + . ID=Thaps10525.2;Parent=Thaps10525;constitutive=1;ensembl_end_phase=2;rank=2 chr16b ensembl protein_coding_gene 124894 127724 . - . ID=Thaps10526;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW7];external_name=Thaps10526;logic_name=jgi_thaps3 chr16b ensembl transcript 124894 127724 . - . ID=Thaps10526;Parent=Thaps10526;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 124894 125645 . - 0 ID=Thaps10526;Parent=Thaps10526;rank=4 chr16b . exon 124894 125645 . - . ID=Thaps10526.4;Parent=Thaps10526;constitutive=1;ensembl_end_phase=2;rank=4 chr16b . CDS 125734 126076 . - 0 ID=Thaps10526;Parent=Thaps10526;rank=3 chr16b . exon 125734 126076 . - . ID=Thaps10526.3;Parent=Thaps10526;constitutive=1;ensembl_end_phase=1;rank=3 chr16b . CDS 126151 126411 . - 0 ID=Thaps10526;Parent=Thaps10526;rank=2 chr16b . exon 126151 126411 . - . ID=Thaps10526.2;Parent=Thaps10526;constitutive=1;rank=2 chr16b . CDS 126501 127724 . - 0 ID=Thaps10526;Parent=Thaps10526;rank=1 chr16b . exon 126501 127724 . - . ID=Thaps10526.1;Parent=Thaps10526;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 128336 129042 . + . ID=Thaps10527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW8];external_name=Thaps10527;logic_name=jgi_thaps3 chr16b ensembl transcript 128336 129042 . + . ID=Thaps10527;Parent=Thaps10527;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 128336 128714 . + 0 ID=Thaps10527;Parent=Thaps10527;rank=1 chr16b . exon 128336 128714 . + . ID=Thaps10527.1;Parent=Thaps10527;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . CDS 128744 129042 . + 0 ID=Thaps10527;Parent=Thaps10527;rank=2 chr16b . exon 128744 129042 . + . ID=Thaps10527.2;Parent=Thaps10527;constitutive=1;ensembl_end_phase=2;rank=2 chr16b ensembl protein_coding_gene 131856 132980 . + . ID=Thaps10529;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX0];external_name=Thaps10529;logic_name=jgi_thaps3 chr16b ensembl transcript 131856 132980 . + . ID=Thaps10529;Parent=Thaps10529;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 131856 132980 . + 0 ID=Thaps10529;Parent=Thaps10529;rank=1 chr16b . exon 131856 132980 . + . ID=Thaps10529.1;Parent=Thaps10529;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 136826 137924 . - . ID=Thaps10532;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX3];external_name=Thaps10532;logic_name=jgi_thaps3 chr16b ensembl transcript 136826 137924 . - . ID=Thaps10532;Parent=Thaps10532;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 136826 136905 . - 0 ID=Thaps10532;Parent=Thaps10532;rank=4 chr16b . exon 136826 136905 . - . ID=Thaps10532.4;Parent=Thaps10532;constitutive=1;ensembl_end_phase=2;rank=4 chr16b . CDS 136997 137130 . - 0 ID=Thaps10532;Parent=Thaps10532;rank=3 chr16b . exon 136997 137130 . - . ID=Thaps10532.3;Parent=Thaps10532;constitutive=1;ensembl_end_phase=2;rank=3 chr16b . CDS 137241 137367 . - 0 ID=Thaps10532;Parent=Thaps10532;rank=2 chr16b . exon 137241 137367 . - . ID=Thaps10532.2;Parent=Thaps10532;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 137477 137924 . - 0 ID=Thaps10532;Parent=Thaps10532;rank=1 chr16b . exon 137477 137924 . - . ID=Thaps10532.1;Parent=Thaps10532;constitutive=1;ensembl_end_phase=1;rank=1 chr16b ensembl protein_coding_gene 138532 142268 . + . ID=Thaps10533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX4];external_name=Thaps10533;logic_name=jgi_thaps3 chr16b ensembl transcript 138532 142268 . + . ID=Thaps10533;Parent=Thaps10533;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 138532 140098 . + 0 ID=Thaps10533;Parent=Thaps10533;rank=1 chr16b . exon 138532 140098 . + . ID=Thaps10533.1;Parent=Thaps10533;constitutive=1;ensembl_end_phase=1;rank=1 chr16b . CDS 140181 141040 . + 0 ID=Thaps10533;Parent=Thaps10533;rank=2 chr16b . CDS 141094 141259 . + 0 ID=Thaps10533;Parent=Thaps10533;rank=3 chr16b . CDS 141328 142268 . + 0 ID=Thaps10533;Parent=Thaps10533;rank=4 chr16b ensembl protein_coding_gene 134164 135409 . - . ID=Thaps25193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX1];external_name=Thaps25193;logic_name=jgi_thaps3 chr16b ensembl transcript 134164 135409 . - . ID=Thaps25193;Parent=Thaps25193;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 134164 134834 . - 0 ID=Thaps25193;Parent=Thaps25193;rank=2 chr16b . exon 134164 134834 . - . ID=Thaps25193.2;Parent=Thaps25193;constitutive=1;ensembl_end_phase=2;rank=2 chr16b . CDS 134929 135409 . - 0 ID=Thaps25193;Parent=Thaps25193;rank=1 chr16b . exon 134929 135409 . - . ID=Thaps25193.1;Parent=Thaps25193;constitutive=1;ensembl_end_phase=1;rank=1 chr16b ensembl protein_coding_gene 135695 136267 . + . ID=Thaps25194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX2];external_name=Thaps25194;logic_name=jgi_thaps3 chr16b ensembl transcript 135695 136267 . + . ID=Thaps25194;Parent=Thaps25194;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 135695 136267 . + 0 ID=Thaps25194;Parent=Thaps25194;rank=1 chr16b . exon 135695 136267 . + . ID=Thaps25194.1;Parent=Thaps25194;constitutive=1;rank=1 chr16b ensembl protein_coding_gene 130264 131478 . - . ID=Thaps42612;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCW9];external_name=Thaps42612;logic_name=jgi_thaps3 chr16b ensembl transcript 130264 131478 . - . ID=Thaps42612;Parent=Thaps42612;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 130264 131169 . - 0 ID=Thaps42612;Parent=Thaps42612;rank=2 chr16b . exon 130264 131169 . - . ID=Thaps42612.2;Parent=Thaps42612;constitutive=1;rank=2 chr16b . CDS 131377 131478 . - 0 ID=Thaps42612;Parent=Thaps42612;rank=1 chr16b . exon 131377 131478 . - . ID=Thaps42612.1;Parent=Thaps42612;constitutive=1;rank=1 chr16b . repeat_region 146215 146276 . - . description=Harbinger3_TP chr16b . repeat_region 146283 146549 . + . description=TE2b_TP chr16b . repeat_region 146860 146868 . ? . description=dust chr16b . exon 140181 141040 . + . ID=Thaps10533.2;Parent=Thaps10533;constitutive=1;ensembl_end_phase=2;rank=2 chr16b . exon 141094 141259 . + . ID=Thaps10533.3;Parent=Thaps10533;constitutive=1;ensembl_end_phase=1;rank=3 chr16b . exon 141328 142268 . + . ID=Thaps10533.4;Parent=Thaps10533;constitutive=1;ensembl_end_phase=2;rank=4 chr16b ensembl protein_coding_gene 146900 149119 . + . ID=Thaps10535;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX6];external_name=Thaps10535;logic_name=jgi_thaps3 chr16b ensembl transcript 146900 149119 . + . ID=Thaps10535;Parent=Thaps10535;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 146900 147861 . + 0 ID=Thaps10535;Parent=Thaps10535;rank=1 chr16b . exon 146900 147861 . + . ID=Thaps10535.1;Parent=Thaps10535;constitutive=1;ensembl_end_phase=2;rank=1 chr16b . CDS 147936 147992 . + 0 ID=Thaps10535;Parent=Thaps10535;rank=2 chr16b . exon 147936 147992 . + . ID=Thaps10535.2;Parent=Thaps10535;constitutive=1;rank=2 chr16b . CDS 148018 149119 . + 0 ID=Thaps10535;Parent=Thaps10535;rank=3 chr16b . exon 148018 149119 . + . ID=Thaps10535.3;Parent=Thaps10535;constitutive=1;ensembl_end_phase=1;rank=3 chr16b ensembl protein_coding_gene 143811 145122 . - . ID=Thaps14378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX5];external_name=Thaps14378;logic_name=jgi_thaps3 chr16b ensembl transcript 143811 145122 . - . ID=Thaps14378;Parent=Thaps14378;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 143811 144147 . - 0 ID=Thaps14378;Parent=Thaps14378;rank=2 chr16b . exon 143811 144147 . - . ID=Thaps14378.2;Parent=Thaps14378;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 144350 145122 . - 0 ID=Thaps14378;Parent=Thaps14378;rank=1 chr16b . exon 144350 145122 . - . ID=Thaps14378.1;Parent=Thaps14378;constitutive=1;ensembl_end_phase=2;rank=1 chr16b . repeat_region 149697 153213 . + . description=Copia7I_TP chr16b . repeat_region 153570 153889 . + . description=TE2_TP chr16b . repeat_region 153611 153645 . ? . description=trf chr16b . repeat_region 154232 154444 . + . description=tp14_ASNotSingleton chr16b . repeat_region 154987 155216 . ? . description=trf chr16b . repeat_region 156008 156484 . + . description=TE2_TP chr16b . repeat_region 156400 156470 . ? . description=trf chr16b . repeat_region 156402 156474 . ? . description=trf chr16b . repeat_region 156623 156661 . - . description=Harbinger1_TP chr16b . repeat_region 156793 157650 . + . description=TE2_TP chr16b . repeat_region 157084 157186 . ? . description=trf chr16b . repeat_region 157119 157158 . ? . description=trf chr16b . repeat_region 157379 157413 . ? . description=trf chr16b . repeat_region 158111 158211 . ? . description=trf chr16b . repeat_region 158270 158407 . ? . description=trf chr16b . repeat_region 158302 158423 . ? . description=trf chr16b . repeat_region 158418 158907 . ? . description=trf chr16b ensembl protein_coding_gene 154485 155907 . + . ID=Thaps10536;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX7];external_name=Thaps10536;logic_name=jgi_thaps3 chr16b ensembl transcript 154485 155907 . + . ID=Thaps10536;Parent=Thaps10536;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 154485 154492 . + 0 ID=Thaps10536;Parent=Thaps10536;rank=1 chr16b . exon 154485 154492 . + . ID=Thaps10536.1;Parent=Thaps10536;constitutive=1;ensembl_end_phase=2;rank=1 chr16b . CDS 154539 155280 . + 0 ID=Thaps10536;Parent=Thaps10536;rank=2 chr16b . exon 154539 155280 . + . ID=Thaps10536.2;Parent=Thaps10536;constitutive=1;ensembl_end_phase=1;rank=2 chr16b . CDS 155361 155840 . + 0 ID=Thaps10536;Parent=Thaps10536;rank=3 chr16b . exon 155361 155840 . + . ID=Thaps10536.3;Parent=Thaps10536;constitutive=1;rank=3 chr16b . CDS 155899 155907 . + 0 ID=Thaps10536;Parent=Thaps10536;rank=4 chr16b . exon 155899 155907 . + . ID=Thaps10536.4;Parent=Thaps10536;constitutive=1;rank=4 chr16b . repeat_region 162907 163071 . - . description=Harbinger2N_TP chr16b . repeat_region 162958 163021 . ? . description=dust chr16b . repeat_region 163072 163509 . - . description=Harbinger2N_TP chr16b . repeat_region 163087 163245 . ? . description=dust chr16b . repeat_region 163406 163468 . ? . description=dust chr16b . repeat_region 163511 163670 . - . description=Harbinger2N_TP chr16b . repeat_region 163512 163579 . ? . description=dust chr16b . repeat_region 163955 164008 . - . description=MuDR1_TP chr16b . repeat_region 167182 167254 . ? . description=dust chr16b . repeat_region 167908 168045 . ? . description=dust chr16b . repeat_region 169102 169376 . ? . description=dust chr16b ensembl protein_coding_gene 164022 167097 . + . ID=Thaps10537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX8];external_name=Thaps10537;logic_name=jgi_thaps3 chr16b ensembl transcript 164022 167097 . + . ID=Thaps10537;Parent=Thaps10537;biotype=protein_coding;logic_name=jgi_thaps3 chr16b . CDS 164022 166148 . + 0 ID=Thaps10537;Parent=Thaps10537;rank=1 chr16b . exon 164022 166148 . + . ID=Thaps10537.1;Parent=Thaps10537;constitutive=1;rank=1 chr16b . CDS 166246 167097 . + 0 ID=Thaps10537;Parent=Thaps10537;rank=2 chr16b . exon 166246 167097 . + . ID=Thaps10537.2;Parent=Thaps10537;constitutive=1;rank=2 ##gff-version 3 ##sequence-region 19c_29 1 291194 chr19c_29 . repeat_region 2066 2110 . ? . description=trf chr19c_29 . repeat_region 2887 4909 . ? . description=dust chr19c_29 . repeat_region 5697 5787 . + . description=Harbinger1_TP chr19c_29 . repeat_region 5721 5728 . ? . description=dust chr19c_29 . repeat_region 5798 5852 . + . description=Harbinger3_TP chr19c_29 . repeat_region 5864 6098 . - . description=Copia6LTR_TP chr19c_29 . biological_region 5910 5912 0.999 + . logic_name=eponine chr19c_29 . repeat_region 6099 7327 . - . description=Copia6I_TP chr19c_29 ensembl protein_coding_gene 68 2515 . + . ID=Thaps11315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDN9];external_name=Thaps11315;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 68 2515 . + . ID=Thaps11315;Parent=Thaps11315;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 68 292 . + 0 ID=Thaps11315;Parent=Thaps11315;rank=1 chr19c_29 . exon 68 292 . + . ID=Thaps11315.1;Parent=Thaps11315;constitutive=1;rank=1 chr19c_29 . CDS 381 1386 . + 0 ID=Thaps11315;Parent=Thaps11315;rank=2 chr19c_29 . exon 381 1386 . + . ID=Thaps11315.2;Parent=Thaps11315;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 1473 1574 . + 0 ID=Thaps11315;Parent=Thaps11315;rank=3 chr19c_29 . exon 1473 1574 . + . ID=Thaps11315.3;Parent=Thaps11315;constitutive=1;rank=3 chr19c_29 . CDS 1667 1971 . + 0 ID=Thaps11315;Parent=Thaps11315;rank=4 chr19c_29 . exon 1667 1971 . + . ID=Thaps11315.4;Parent=Thaps11315;constitutive=1;ensembl_end_phase=2;rank=4 chr19c_29 . CDS 2053 2424 . + 0 ID=Thaps11315;Parent=Thaps11315;rank=5 chr19c_29 . exon 2053 2424 . + . ID=Thaps11315.5;Parent=Thaps11315;constitutive=1;rank=5 chr19c_29 . CDS 2462 2515 . + 0 ID=Thaps11315;Parent=Thaps11315;rank=6 chr19c_29 . exon 2462 2515 . + . ID=Thaps11315.6;Parent=Thaps11315;constitutive=1;rank=6 chr19c_29 ensembl protein_coding_gene 7592 12363 . - . ID=Thaps11316;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDP0];external_name=Thaps11316;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 7592 12363 . - . ID=Thaps11316;Parent=Thaps11316;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 7592 7911 . - 0 ID=Thaps11316;Parent=Thaps11316;rank=3 chr19c_29 . exon 7592 7911 . - . ID=Thaps11316.3;Parent=Thaps11316;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 7982 10676 . - 0 ID=Thaps11316;Parent=Thaps11316;rank=2 chr19c_29 . exon 7982 10676 . - . ID=Thaps11316.2;Parent=Thaps11316;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 10711 12363 . - 0 ID=Thaps11316;Parent=Thaps11316;rank=1 chr19c_29 ensembl gene 5838 6663 . - . ID=Thaps264634;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 5838 6663 . - . ID=Thaps264634;Parent=Thaps264634;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr19c_29 . exon 5838 5842 . - . ID=Thaps264634.2;Parent=Thaps264634;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . exon 6266 6663 . - . ID=Thaps264634.1;Parent=Thaps264634;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 . exon 10711 12363 . - . ID=Thaps11316.1;Parent=Thaps11316;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 13217 18439 . - . ID=Thaps11317;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDP1];external_name=Thaps11317;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 13217 18439 . - . ID=Thaps11317;Parent=Thaps11317;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 13217 13725 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=13 chr19c_29 . exon 13217 13725 . - . ID=Thaps11317.13;Parent=Thaps11317;constitutive=1;ensembl_end_phase=2;rank=13 chr19c_29 . CDS 13877 14178 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=12 chr19c_29 . exon 13877 14178 . - . ID=Thaps11317.12;Parent=Thaps11317;constitutive=1;ensembl_end_phase=2;rank=12 chr19c_29 . CDS 14323 15349 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=11 chr19c_29 . exon 14323 15349 . - . ID=Thaps11317.11;Parent=Thaps11317;constitutive=1;ensembl_end_phase=1;rank=11 chr19c_29 . CDS 15421 15656 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=10 chr19c_29 . exon 15421 15656 . - . ID=Thaps11317.10;Parent=Thaps11317;constitutive=1;ensembl_end_phase=2;rank=10 chr19c_29 . CDS 15692 16126 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=9 chr19c_29 . exon 15692 16126 . - . ID=Thaps11317.9;Parent=Thaps11317;constitutive=1;rank=9 chr19c_29 . CDS 16235 16367 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=8 chr19c_29 . exon 16235 16367 . - . ID=Thaps11317.8;Parent=Thaps11317;constitutive=1;ensembl_end_phase=1;rank=8 chr19c_29 . CDS 16400 17175 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=7 chr19c_29 . exon 16400 17175 . - . ID=Thaps11317.7;Parent=Thaps11317;constitutive=1;ensembl_end_phase=2;rank=7 chr19c_29 . CDS 17264 17416 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=6 chr19c_29 . exon 17264 17416 . - . ID=Thaps11317.6;Parent=Thaps11317;constitutive=1;rank=6 chr19c_29 . CDS 17444 17550 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=5 chr19c_29 . exon 17444 17550 . - . ID=Thaps11317.5;Parent=Thaps11317;constitutive=1;ensembl_end_phase=2;rank=5 chr19c_29 . CDS 17574 17662 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=4 chr19c_29 . exon 17574 17662 . - . ID=Thaps11317.4;Parent=Thaps11317;constitutive=1;ensembl_end_phase=2;rank=4 chr19c_29 . CDS 17736 17817 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=3 chr19c_29 . exon 17736 17817 . - . ID=Thaps11317.3;Parent=Thaps11317;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 17858 18073 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=2 chr19c_29 . exon 17858 18073 . - . ID=Thaps11317.2;Parent=Thaps11317;constitutive=1;rank=2 chr19c_29 . CDS 18200 18439 . - 0 ID=Thaps11317;Parent=Thaps11317;rank=1 chr19c_29 . exon 18200 18439 . - . ID=Thaps11317.1;Parent=Thaps11317;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 18877 22231 . + . ID=Thaps25525;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDP2];external_name=Thaps25525;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 18877 22231 . + . ID=Thaps25525;Parent=Thaps25525;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 18877 19101 . + 0 ID=Thaps25525;Parent=Thaps25525;rank=1 chr19c_29 . exon 18877 19101 . + . ID=Thaps25525.1;Parent=Thaps25525;constitutive=1;rank=1 chr19c_29 . CDS 19190 20207 . + 0 ID=Thaps25525;Parent=Thaps25525;rank=2 chr19c_29 . exon 19190 20207 . + . ID=Thaps25525.2;Parent=Thaps25525;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 20294 20394 . + 0 ID=Thaps25525;Parent=Thaps25525;rank=3 chr19c_29 . CDS 20456 20791 . + 0 ID=Thaps25525;Parent=Thaps25525;rank=4 chr19c_29 . CDS 20873 22231 . + 0 ID=Thaps25525;Parent=Thaps25525;rank=5 chr19c_29 . repeat_region 20887 20930 . ? . description=trf chr19c_29 . repeat_region 25413 25420 . ? . description=dust chr19c_29 . repeat_region 26427 26452 . ? . description=trf chr19c_29 . repeat_region 27706 27713 . ? . description=dust chr19c_29 ensembl protein_coding_gene 22643 26602 . - . ID=Thaps11319;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDP3];external_name=Thaps11319;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 22643 26602 . - . ID=Thaps11319;Parent=Thaps11319;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 22643 26602 . - 0 ID=Thaps11319;Parent=Thaps11319;rank=1 chr19c_29 . exon 22643 26602 . - . ID=Thaps11319.1;Parent=Thaps11319;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 28026 29393 . + . ID=Thaps11320;biotype=protein_coding;description=2-dehydro-3-deoxyphosphoheptonate aldolase [Source:UniProtKB/TrEMBL%3BAcc:B8LDP4];external_name=DPHA1;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 28026 29393 . + . ID=Thaps11320;Parent=Thaps11320;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 28026 29393 . + 0 ID=Thaps11320;Parent=Thaps11320;rank=1 chr19c_29 . exon 28026 29393 . + . ID=Thaps11320.1;Parent=Thaps11320;constitutive=1;rank=1 chr19c_29 . exon 20294 20394 . + . ID=Thaps25525.3;Parent=Thaps25525;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . exon 20456 20791 . + . ID=Thaps25525.4;Parent=Thaps25525;constitutive=1;rank=4 chr19c_29 . exon 20873 22231 . + . ID=Thaps25525.5;Parent=Thaps25525;constitutive=1;rank=5 chr19c_29 ensembl protein_coding_gene 30488 32785 . - . ID=Thaps25526;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDP5];external_name=Thaps25526;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 30488 32785 . - . ID=Thaps25526;Parent=Thaps25526;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 30488 32785 . - 0 ID=Thaps25526;Parent=Thaps25526;rank=1 chr19c_29 . exon 30488 32785 . - . ID=Thaps25526.1;Parent=Thaps25526;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 34007 34545 . + . ID=Thaps25527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDP6];external_name=Thaps25527;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 34007 34545 . + . ID=Thaps25527;Parent=Thaps25527;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 34007 34200 . + 0 ID=Thaps25527;Parent=Thaps25527;rank=1 chr19c_29 . exon 34007 34200 . + . ID=Thaps25527.1;Parent=Thaps25527;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 . CDS 34242 34431 . + 0 ID=Thaps25527;Parent=Thaps25527;rank=2 chr19c_29 . exon 34242 34431 . + . ID=Thaps25527.2;Parent=Thaps25527;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 34495 34545 . + 0 ID=Thaps25527;Parent=Thaps25527;rank=3 chr19c_29 . exon 34495 34545 . + . ID=Thaps25527.3;Parent=Thaps25527;constitutive=1;rank=3 chr19c_29 ensembl protein_coding_gene 34948 35850 . + . ID=Thaps25528;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDP7];external_name=Thaps25528;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 34948 35850 . + . ID=Thaps25528;Parent=Thaps25528;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 34948 35850 . + 0 ID=Thaps25528;Parent=Thaps25528;rank=1 chr19c_29 . exon 34948 35850 . + . ID=Thaps25528.1;Parent=Thaps25528;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 36970 38966 . - . ID=Thaps38351;biotype=protein_coding;description=Arylsulfatase [Source:UniProtKB/TrEMBL%3BAcc:B8LDP8];external_name=Thaps38351;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 36970 38966 . - . ID=Thaps38351;Parent=Thaps38351;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 36970 37181 . - 0 ID=Thaps38351;Parent=Thaps38351;rank=5 chr19c_29 . exon 36970 37181 . - . ID=Thaps38351.5;Parent=Thaps38351;constitutive=1;ensembl_end_phase=2;rank=5 chr19c_29 . CDS 37265 37627 . - 0 ID=Thaps38351;Parent=Thaps38351;rank=4 chr19c_29 . exon 37265 37627 . - . ID=Thaps38351.4;Parent=Thaps38351;constitutive=1;rank=4 chr19c_29 . CDS 37743 38045 . - 0 ID=Thaps38351;Parent=Thaps38351;rank=3 chr19c_29 . exon 37743 38045 . - . ID=Thaps38351.3;Parent=Thaps38351;constitutive=1;rank=3 chr19c_29 . CDS 38126 38401 . - 0 ID=Thaps38351;Parent=Thaps38351;rank=2 chr19c_29 . exon 38126 38401 . - . ID=Thaps38351.2;Parent=Thaps38351;constitutive=1;rank=2 chr19c_29 . CDS 38555 38966 . - 0 ID=Thaps38351;Parent=Thaps38351;rank=1 chr19c_29 . exon 38555 38966 . - . ID=Thaps38351.1;Parent=Thaps38351;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . repeat_region 40310 40318 . ? . description=dust chr19c_29 . repeat_region 40878 40932 . ? . description=dust chr19c_29 ensembl protein_coding_gene 39602 40774 . - . ID=Thaps11325;biotype=protein_coding;description=Amino acid/polyamine transporter family II protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDP9];external_name=Thaps11325;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 39602 40774 . - . ID=Thaps11325;Parent=Thaps11325;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 39602 40774 . - 0 ID=Thaps11325;Parent=Thaps11325;rank=1 chr19c_29 . exon 39602 40774 . - . ID=Thaps11325.1;Parent=Thaps11325;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 47557 48135 . + . ID=Thaps11327;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ1];external_name=Thaps11327;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 47557 48135 . + . ID=Thaps11327;Parent=Thaps11327;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 47557 48135 . + 0 ID=Thaps11327;Parent=Thaps11327;rank=1 chr19c_29 . exon 47557 48135 . + . ID=Thaps11327.1;Parent=Thaps11327;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 44766 45694 . + . ID=Thaps15285;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ0];external_name=Thaps15285;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 44766 45694 . + . ID=Thaps15285;Parent=Thaps15285;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 44766 45110 . + 0 ID=Thaps15285;Parent=Thaps15285;rank=1 chr19c_29 . exon 44766 45110 . + . ID=Thaps15285.1;Parent=Thaps15285;constitutive=1;rank=1 chr19c_29 . CDS 45197 45271 . + 0 ID=Thaps15285;Parent=Thaps15285;rank=2 chr19c_29 . exon 45197 45271 . + . ID=Thaps15285.2;Parent=Thaps15285;constitutive=1;rank=2 chr19c_29 . CDS 45368 45694 . + 0 ID=Thaps15285;Parent=Thaps15285;rank=3 chr19c_29 . exon 45368 45694 . + . ID=Thaps15285.3;Parent=Thaps15285;constitutive=1;rank=3 chr19c_29 ensembl protein_coding_gene 56269 57336 . + . ID=Thaps11330;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ4];external_name=Thaps11330;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 56269 57336 . + . ID=Thaps11330;Parent=Thaps11330;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 56269 57336 . + 0 ID=Thaps11330;Parent=Thaps11330;rank=1 chr19c_29 . exon 56269 57336 . + . ID=Thaps11330.1;Parent=Thaps11330;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 57532 58610 . - . ID=Thaps11331;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ5];external_name=Thaps11331;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 57532 58610 . - . ID=Thaps11331;Parent=Thaps11331;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 57532 57821 . - 0 ID=Thaps11331;Parent=Thaps11331;rank=3 chr19c_29 . exon 57532 57821 . - . ID=Thaps11331.3;Parent=Thaps11331;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 57970 58306 . - 0 ID=Thaps11331;Parent=Thaps11331;rank=2 chr19c_29 . exon 57970 58306 . - . ID=Thaps11331.2;Parent=Thaps11331;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 58542 58610 . - 0 ID=Thaps11331;Parent=Thaps11331;rank=1 chr19c_29 ensembl protein_coding_gene 49342 50785 . + . ID=Thaps14374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ2];external_name=Thaps14374;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 49342 50785 . + . ID=Thaps14374;Parent=Thaps14374;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 49342 49695 . + 0 ID=Thaps14374;Parent=Thaps14374;rank=1 chr19c_29 . exon 49342 49695 . + . ID=Thaps14374.1;Parent=Thaps14374;constitutive=1;rank=1 chr19c_29 . CDS 49779 49937 . + 0 ID=Thaps14374;Parent=Thaps14374;rank=2 chr19c_29 . exon 49779 49937 . + . ID=Thaps14374.2;Parent=Thaps14374;constitutive=1;rank=2 chr19c_29 . CDS 50019 50616 . + 0 ID=Thaps14374;Parent=Thaps14374;rank=3 chr19c_29 . exon 50019 50616 . + . ID=Thaps14374.3;Parent=Thaps14374;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 50694 50785 . + 0 ID=Thaps14374;Parent=Thaps14374;rank=4 chr19c_29 . exon 50694 50785 . + . ID=Thaps14374.4;Parent=Thaps14374;constitutive=1;ensembl_end_phase=2;rank=4 chr19c_29 ensembl protein_coding_gene 52336 55806 . + . ID=Thaps269997;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ3];external_name=Thaps269997;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 52336 55806 . + . ID=Thaps269997;Parent=Thaps269997;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 52336 52609 . + 0 ID=Thaps269997;Parent=Thaps269997;rank=1 chr19c_29 . exon 52336 52609 . + . ID=Thaps269997.1;Parent=Thaps269997;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 52717 53738 . + 0 ID=Thaps269997;Parent=Thaps269997;rank=2 chr19c_29 . exon 52717 53738 . + . ID=Thaps269997.2;Parent=Thaps269997;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 53781 53815 . + 0 ID=Thaps269997;Parent=Thaps269997;rank=3 chr19c_29 . exon 53781 53815 . + . ID=Thaps269997.3;Parent=Thaps269997;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 53902 54153 . + 0 ID=Thaps269997;Parent=Thaps269997;rank=4 chr19c_29 . exon 53902 54153 . + . ID=Thaps269997.4;Parent=Thaps269997;constitutive=1;rank=4 chr19c_29 . CDS 54342 54658 . + 0 ID=Thaps269997;Parent=Thaps269997;rank=5 chr19c_29 . exon 54342 54658 . + . ID=Thaps269997.5;Parent=Thaps269997;constitutive=1;ensembl_end_phase=2;rank=5 chr19c_29 . CDS 54770 54834 . + 0 ID=Thaps269997;Parent=Thaps269997;rank=6 chr19c_29 . exon 54770 54834 . + . ID=Thaps269997.6;Parent=Thaps269997;constitutive=1;ensembl_end_phase=2;rank=6 chr19c_29 . CDS 54910 54946 . + 0 ID=Thaps269997;Parent=Thaps269997;rank=7 chr19c_29 . exon 54910 54946 . + . ID=Thaps269997.7;Parent=Thaps269997;constitutive=1;ensembl_end_phase=1;rank=7 chr19c_29 . CDS 55025 55113 . + 0 ID=Thaps269997;Parent=Thaps269997;rank=8 chr19c_29 . exon 55025 55113 . + . ID=Thaps269997.8;Parent=Thaps269997;constitutive=1;ensembl_end_phase=2;rank=8 chr19c_29 . CDS 55189 55806 . + 0 ID=Thaps269997;Parent=Thaps269997;rank=9 chr19c_29 . exon 55189 55806 . + . ID=Thaps269997.9;Parent=Thaps269997;constitutive=1;rank=9 chr19c_29 . repeat_region 66841 66883 . ? . description=dust chr19c_29 . exon 58542 58610 . - . ID=Thaps11331.1;Parent=Thaps11331;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 58895 60175 . + . ID=Thaps11332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ6];external_name=Thaps11332;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 58895 60175 . + . ID=Thaps11332;Parent=Thaps11332;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 58895 59366 . + 0 ID=Thaps11332;Parent=Thaps11332;rank=1 chr19c_29 . exon 58895 59366 . + . ID=Thaps11332.1;Parent=Thaps11332;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 59461 59614 . + 0 ID=Thaps11332;Parent=Thaps11332;rank=2 chr19c_29 . exon 59461 59614 . + . ID=Thaps11332.2;Parent=Thaps11332;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 59689 59741 . + 0 ID=Thaps11332;Parent=Thaps11332;rank=3 chr19c_29 . exon 59689 59741 . + . ID=Thaps11332.3;Parent=Thaps11332;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 59833 60097 . + 0 ID=Thaps11332;Parent=Thaps11332;rank=4 chr19c_29 . exon 59833 60097 . + . ID=Thaps11332.4;Parent=Thaps11332;constitutive=1;ensembl_end_phase=1;rank=4 chr19c_29 . CDS 60157 60175 . + 0 ID=Thaps11332;Parent=Thaps11332;rank=5 chr19c_29 . exon 60157 60175 . + . ID=Thaps11332.5;Parent=Thaps11332;constitutive=1;ensembl_end_phase=1;rank=5 chr19c_29 ensembl protein_coding_gene 67345 68903 . + . ID=Thaps15093;biotype=protein_coding;description=Serine carboxypeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ8];external_name=Thaps15093;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 67345 68903 . + . ID=Thaps15093;Parent=Thaps15093;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 67345 67393 . + 0 ID=Thaps15093;Parent=Thaps15093;rank=1 chr19c_29 . exon 67345 67393 . + . ID=Thaps15093.1;Parent=Thaps15093;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 67547 67873 . + 0 ID=Thaps15093;Parent=Thaps15093;rank=2 chr19c_29 . exon 67547 67873 . + . ID=Thaps15093.2;Parent=Thaps15093;constitutive=1;rank=2 chr19c_29 . CDS 67979 68732 . + 0 ID=Thaps15093;Parent=Thaps15093;rank=3 chr19c_29 . CDS 68846 68903 . + 0 ID=Thaps15093;Parent=Thaps15093;rank=4 chr19c_29 ensembl protein_coding_gene 61431 62745 . - . ID=Thaps25531;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ7];external_name=Thaps25531;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 61431 62745 . - . ID=Thaps25531;Parent=Thaps25531;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 61431 61675 . - 0 ID=Thaps25531;Parent=Thaps25531;rank=2 chr19c_29 . exon 61431 61675 . - . ID=Thaps25531.2;Parent=Thaps25531;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 61767 62745 . - 0 ID=Thaps25531;Parent=Thaps25531;rank=1 chr19c_29 . exon 61767 62745 . - . ID=Thaps25531.1;Parent=Thaps25531;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . repeat_region 75143 75162 . ? . description=trf chr19c_29 . repeat_region 76394 76425 . ? . description=trf chr19c_29 ensembl protein_coding_gene 72671 73988 . + . ID=Thaps11337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDR1];external_name=Thaps11337;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 72671 73988 . + . ID=Thaps11337;Parent=Thaps11337;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 72671 72906 . + 0 ID=Thaps11337;Parent=Thaps11337;rank=1 chr19c_29 . exon 72671 72906 . + . ID=Thaps11337.1;Parent=Thaps11337;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 . CDS 72987 73378 . + 0 ID=Thaps11337;Parent=Thaps11337;rank=2 chr19c_29 . exon 72987 73378 . + . ID=Thaps11337.2;Parent=Thaps11337;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 73489 73988 . + 0 ID=Thaps11337;Parent=Thaps11337;rank=3 chr19c_29 . exon 73489 73988 . + . ID=Thaps11337.3;Parent=Thaps11337;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 ensembl protein_coding_gene 74199 74965 . - . ID=Thaps11338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDR2];external_name=Thaps11338;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 74199 74965 . - . ID=Thaps11338;Parent=Thaps11338;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 74199 74256 . - 0 ID=Thaps11338;Parent=Thaps11338;rank=2 chr19c_29 . exon 74199 74256 . - . ID=Thaps11338.2;Parent=Thaps11338;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 74319 74965 . - 0 ID=Thaps11338;Parent=Thaps11338;rank=1 chr19c_29 . exon 74319 74965 . - . ID=Thaps11338.1;Parent=Thaps11338;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 . exon 67979 68732 . + . ID=Thaps15093.3;Parent=Thaps15093;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . exon 68846 68903 . + . ID=Thaps15093.4;Parent=Thaps15093;constitutive=1;ensembl_end_phase=1;rank=4 chr19c_29 ensembl protein_coding_gene 77492 81391 . + . ID=Thaps270000;biotype=protein_coding;description=Signal peptidase [Source:UniProtKB/TrEMBL%3BAcc:B8LDR3];external_name=Thaps270000;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 77492 81391 . + . ID=Thaps270000;Parent=Thaps270000;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 77492 77579 . + 0 ID=Thaps270000;Parent=Thaps270000;rank=1 chr19c_29 . exon 77492 77579 . + . ID=Thaps270000.1;Parent=Thaps270000;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 77793 77856 . + 0 ID=Thaps270000;Parent=Thaps270000;rank=2 chr19c_29 . CDS 77954 78269 . + 0 ID=Thaps270000;Parent=Thaps270000;rank=3 chr19c_29 . CDS 78516 78846 . + 0 ID=Thaps270000;Parent=Thaps270000;rank=4 chr19c_29 . CDS 78907 79454 . + 0 ID=Thaps270000;Parent=Thaps270000;rank=5 chr19c_29 . CDS 79469 80543 . + 0 ID=Thaps270000;Parent=Thaps270000;rank=6 chr19c_29 . CDS 80907 81391 . + 0 ID=Thaps270000;Parent=Thaps270000;rank=7 chr19c_29 ensembl protein_coding_gene 71003 72597 . - . ID=Thaps38359;biotype=protein_coding;description=Glutmatae dehydrogenase%2C nadp-gdh [Source:UniProtKB/TrEMBL%3BAcc:B8LDR0];external_name=GDH_1;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 71003 72597 . - . ID=Thaps38359;Parent=Thaps38359;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 71003 71815 . - 0 ID=Thaps38359;Parent=Thaps38359;rank=4 chr19c_29 . exon 71003 71815 . - . ID=Thaps38359.4;Parent=Thaps38359;constitutive=1;rank=4 chr19c_29 . CDS 71897 72063 . - 0 ID=Thaps38359;Parent=Thaps38359;rank=3 chr19c_29 . exon 71897 72063 . - . ID=Thaps38359.3;Parent=Thaps38359;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 72155 72282 . - 0 ID=Thaps38359;Parent=Thaps38359;rank=2 chr19c_29 . exon 72155 72282 . - . ID=Thaps38359.2;Parent=Thaps38359;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 72386 72597 . - 0 ID=Thaps38359;Parent=Thaps38359;rank=1 chr19c_29 . exon 72386 72597 . - . ID=Thaps38359.1;Parent=Thaps38359;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 ensembl protein_coding_gene 69623 70500 . + . ID=Thaps38360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDQ9];external_name=Thaps38360;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 69623 70500 . + . ID=Thaps38360;Parent=Thaps38360;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 69623 70319 . + 0 ID=Thaps38360;Parent=Thaps38360;rank=1 chr19c_29 . exon 69623 70319 . + . ID=Thaps38360.1;Parent=Thaps38360;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 70412 70500 . + 0 ID=Thaps38360;Parent=Thaps38360;rank=2 chr19c_29 . exon 70412 70500 . + . ID=Thaps38360.2;Parent=Thaps38360;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 ensembl protein_coding_gene 85498 86679 . - . ID=Thaps11341;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDR5];external_name=Thaps11341;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 85498 86679 . - . ID=Thaps11341;Parent=Thaps11341;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 85498 86679 . - 0 ID=Thaps11341;Parent=Thaps11341;rank=1 chr19c_29 . exon 85498 86679 . - . ID=Thaps11341.1;Parent=Thaps11341;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 86917 88470 . + . ID=Thaps11342;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDR6];external_name=Thaps11342;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 86917 88470 . + . ID=Thaps11342;Parent=Thaps11342;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 86917 88470 . + 0 ID=Thaps11342;Parent=Thaps11342;rank=1 chr19c_29 . exon 86917 88470 . + . ID=Thaps11342.1;Parent=Thaps11342;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 82552 84666 . + . ID=Thaps25535;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDR4];external_name=Thaps25535;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 82552 84666 . + . ID=Thaps25535;Parent=Thaps25535;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 82552 84666 . + 0 ID=Thaps25535;Parent=Thaps25535;rank=1 chr19c_29 . exon 82552 84666 . + . ID=Thaps25535.1;Parent=Thaps25535;constitutive=1;rank=1 chr19c_29 . exon 77793 77856 . + . ID=Thaps270000.2;Parent=Thaps270000;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . exon 77954 78269 . + . ID=Thaps270000.3;Parent=Thaps270000;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . exon 78516 78846 . + . ID=Thaps270000.4;Parent=Thaps270000;constitutive=1;ensembl_end_phase=1;rank=4 chr19c_29 . exon 78907 79454 . + . ID=Thaps270000.5;Parent=Thaps270000;constitutive=1;ensembl_end_phase=2;rank=5 chr19c_29 . exon 79469 80543 . + . ID=Thaps270000.6;Parent=Thaps270000;constitutive=1;ensembl_end_phase=1;rank=6 chr19c_29 . exon 80907 81391 . + . ID=Thaps270000.7;Parent=Thaps270000;constitutive=1;ensembl_end_phase=2;rank=7 chr19c_29 . repeat_region 88504 88535 . ? . description=trf chr19c_29 . repeat_region 88509 88551 . ? . description=dust chr19c_29 ensembl protein_coding_gene 88743 89462 . - . ID=Thaps11343;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDR7];external_name=Thaps11343;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 88743 89462 . - . ID=Thaps11343;Parent=Thaps11343;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 88743 89462 . - 0 ID=Thaps11343;Parent=Thaps11343;rank=1 chr19c_29 . exon 88743 89462 . - . ID=Thaps11343.1;Parent=Thaps11343;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 93302 97981 . + . ID=Thaps11346;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS0];external_name=Thaps11346;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 93302 97981 . + . ID=Thaps11346;Parent=Thaps11346;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 93302 97981 . + 0 ID=Thaps11346;Parent=Thaps11346;rank=1 chr19c_29 . exon 93302 97981 . + . ID=Thaps11346.1;Parent=Thaps11346;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 90926 92857 . - . ID=Thaps25537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDR9];external_name=Thaps25537;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 90926 92857 . - . ID=Thaps25537;Parent=Thaps25537;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 90926 92857 . - 0 ID=Thaps25537;Parent=Thaps25537;rank=1 chr19c_29 . exon 90926 92857 . - . ID=Thaps25537.1;Parent=Thaps25537;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 89682 90544 . + . ID=Thaps38370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDR8];external_name=Thaps38370;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 89682 90544 . + . ID=Thaps38370;Parent=Thaps38370;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 89682 89739 . + 0 ID=Thaps38370;Parent=Thaps38370;rank=1 chr19c_29 . exon 89682 89739 . + . ID=Thaps38370.1;Parent=Thaps38370;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 89883 90061 . + 0 ID=Thaps38370;Parent=Thaps38370;rank=2 chr19c_29 . exon 89883 90061 . + . ID=Thaps38370.2;Parent=Thaps38370;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 90197 90544 . + 0 ID=Thaps38370;Parent=Thaps38370;rank=3 chr19c_29 . exon 90197 90544 . + . ID=Thaps38370.3;Parent=Thaps38370;constitutive=1;rank=3 chr19c_29 ensembl protein_coding_gene 98162 98617 . - . ID=Thaps11347;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS1];external_name=Thaps11347;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 98162 98617 . - . ID=Thaps11347;Parent=Thaps11347;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 98162 98617 . - 0 ID=Thaps11347;Parent=Thaps11347;rank=1 chr19c_29 . exon 98162 98617 . - . ID=Thaps11347.1;Parent=Thaps11347;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 104964 113800 . + . ID=Thaps25539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS3];external_name=Thaps25539;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 104964 113800 . + . ID=Thaps25539;Parent=Thaps25539;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 104964 105015 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=1 chr19c_29 . exon 104964 105015 . + . ID=Thaps25539.1;Parent=Thaps25539;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 105091 105504 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=2 chr19c_29 . exon 105091 105504 . + . ID=Thaps25539.2;Parent=Thaps25539;constitutive=1;rank=2 chr19c_29 . CDS 105694 106135 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=3 chr19c_29 . exon 105694 106135 . + . ID=Thaps25539.3;Parent=Thaps25539;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 106267 106539 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=4 chr19c_29 . exon 106267 106539 . + . ID=Thaps25539.4;Parent=Thaps25539;constitutive=1;rank=4 chr19c_29 . CDS 106741 106803 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=5 chr19c_29 . exon 106741 106803 . + . ID=Thaps25539.5;Parent=Thaps25539;constitutive=1;rank=5 chr19c_29 . CDS 106892 107683 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=6 chr19c_29 . CDS 107770 107879 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=7 chr19c_29 . CDS 107974 108734 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=8 chr19c_29 . CDS 108831 109058 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=9 chr19c_29 . CDS 109143 109952 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=10 chr19c_29 . CDS 110030 110659 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=11 chr19c_29 . CDS 110743 111070 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=12 chr19c_29 . CDS 111158 112117 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=13 chr19c_29 . CDS 112183 112578 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=14 chr19c_29 . CDS 112665 113800 . + 0 ID=Thaps25539;Parent=Thaps25539;rank=15 chr19c_29 ensembl protein_coding_gene 100454 102578 . - . ID=Thaps264646;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS2];external_name=Thaps264646;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 100454 102578 . - . ID=Thaps264646;Parent=Thaps264646;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 100454 100841 . - 0 ID=Thaps264646;Parent=Thaps264646;rank=6 chr19c_29 . exon 100454 100841 . - . ID=Thaps264646.6;Parent=Thaps264646;constitutive=1;ensembl_end_phase=1;rank=6 chr19c_29 . CDS 100918 101166 . - 0 ID=Thaps264646;Parent=Thaps264646;rank=5 chr19c_29 . exon 100918 101166 . - . ID=Thaps264646.5;Parent=Thaps264646;constitutive=1;rank=5 chr19c_29 . CDS 101255 101865 . - 0 ID=Thaps264646;Parent=Thaps264646;rank=4 chr19c_29 . exon 101255 101865 . - . ID=Thaps264646.4;Parent=Thaps264646;constitutive=1;ensembl_end_phase=2;rank=4 chr19c_29 . CDS 101942 102011 . - 0 ID=Thaps264646;Parent=Thaps264646;rank=3 chr19c_29 . exon 101942 102011 . - . ID=Thaps264646.3;Parent=Thaps264646;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 102045 102048 . - 0 ID=Thaps264646;Parent=Thaps264646;rank=2 chr19c_29 . exon 102045 102048 . - . ID=Thaps264646.2;Parent=Thaps264646;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 102094 102578 . - 0 ID=Thaps264646;Parent=Thaps264646;rank=1 chr19c_29 . exon 102094 102578 . - . ID=Thaps264646.1;Parent=Thaps264646;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 . repeat_region 115832 115840 . ? . description=dust chr19c_29 . repeat_region 116302 116332 . ? . description=trf chr19c_29 . repeat_region 116302 116332 . ? . description=dust chr19c_29 . exon 106892 107683 . + . ID=Thaps25539.6;Parent=Thaps25539;constitutive=1;rank=6 chr19c_29 . exon 107770 107879 . + . ID=Thaps25539.7;Parent=Thaps25539;constitutive=1;ensembl_end_phase=2;rank=7 chr19c_29 . exon 107974 108734 . + . ID=Thaps25539.8;Parent=Thaps25539;constitutive=1;ensembl_end_phase=2;rank=8 chr19c_29 . exon 108831 109058 . + . ID=Thaps25539.9;Parent=Thaps25539;constitutive=1;rank=9 chr19c_29 . exon 109143 109952 . + . ID=Thaps25539.10;Parent=Thaps25539;constitutive=1;rank=10 chr19c_29 . exon 110030 110659 . + . ID=Thaps25539.11;Parent=Thaps25539;constitutive=1;rank=11 chr19c_29 . exon 110743 111070 . + . ID=Thaps25539.12;Parent=Thaps25539;constitutive=1;ensembl_end_phase=1;rank=12 chr19c_29 . exon 111158 112117 . + . ID=Thaps25539.13;Parent=Thaps25539;constitutive=1;rank=13 chr19c_29 . exon 112183 112578 . + . ID=Thaps25539.14;Parent=Thaps25539;constitutive=1;rank=14 chr19c_29 . exon 112665 113800 . + . ID=Thaps25539.15;Parent=Thaps25539;constitutive=1;ensembl_end_phase=2;rank=15 chr19c_29 ensembl protein_coding_gene 114184 116170 . - . ID=Thaps25540;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS4];external_name=Thaps25540;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 114184 116170 . - . ID=Thaps25540;Parent=Thaps25540;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 114184 114675 . - 0 ID=Thaps25540;Parent=Thaps25540;rank=2 chr19c_29 . exon 114184 114675 . - . ID=Thaps25540.2;Parent=Thaps25540;constitutive=1;rank=2 chr19c_29 . CDS 114776 116170 . - 0 ID=Thaps25540;Parent=Thaps25540;rank=1 chr19c_29 . exon 114776 116170 . - . ID=Thaps25540.1;Parent=Thaps25540;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 120266 121108 . - . ID=Thaps11352;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS6];external_name=Thaps11352;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 120266 121108 . - . ID=Thaps11352;Parent=Thaps11352;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 120266 121108 . - 0 ID=Thaps11352;Parent=Thaps11352;rank=1 chr19c_29 . exon 120266 121108 . - . ID=Thaps11352.1;Parent=Thaps11352;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 124844 129577 . + . ID=Thaps11354;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS8];external_name=Thaps11354;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 124844 129577 . + . ID=Thaps11354;Parent=Thaps11354;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 124844 125426 . + 0 ID=Thaps11354;Parent=Thaps11354;rank=1 chr19c_29 . exon 124844 125426 . + . ID=Thaps11354.1;Parent=Thaps11354;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 125449 128718 . + 0 ID=Thaps11354;Parent=Thaps11354;rank=2 chr19c_29 . exon 125449 128718 . + . ID=Thaps11354.2;Parent=Thaps11354;constitutive=1;rank=2 chr19c_29 . CDS 128805 129577 . + 0 ID=Thaps11354;Parent=Thaps11354;rank=3 chr19c_29 ensembl protein_coding_gene 117223 119259 . - . ID=Thaps25541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS5];external_name=Thaps25541;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 117223 119259 . - . ID=Thaps25541;Parent=Thaps25541;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 117223 119259 . - 0 ID=Thaps25541;Parent=Thaps25541;rank=1 chr19c_29 . exon 117223 119259 . - . ID=Thaps25541.1;Parent=Thaps25541;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 122582 124017 . + . ID=Thaps25543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS7];external_name=Thaps25543;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 122582 124017 . + . ID=Thaps25543;Parent=Thaps25543;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 122582 122878 . + 0 ID=Thaps25543;Parent=Thaps25543;rank=1 chr19c_29 . exon 122582 122878 . + . ID=Thaps25543.1;Parent=Thaps25543;constitutive=1;rank=1 chr19c_29 . CDS 122983 124017 . + 0 ID=Thaps25543;Parent=Thaps25543;rank=2 chr19c_29 . exon 122983 124017 . + . ID=Thaps25543.2;Parent=Thaps25543;constitutive=1;rank=2 chr19c_29 . repeat_region 135154 135178 . ? . description=dust chr19c_29 . repeat_region 135158 135178 . ? . description=trf chr19c_29 . repeat_region 135246 135253 . ? . description=dust chr19c_29 . exon 128805 129577 . + . ID=Thaps11354.3;Parent=Thaps11354;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 ensembl protein_coding_gene 134318 137101 . - . ID=Thaps25544;biotype=protein_coding;description=Phosphoglycolate phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8LDT0];external_name=PGP;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 134318 137101 . - . ID=Thaps25544;Parent=Thaps25544;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 134318 135139 . - 0 ID=Thaps25544;Parent=Thaps25544;rank=3 chr19c_29 . exon 134318 135139 . - . ID=Thaps25544.3;Parent=Thaps25544;constitutive=1;rank=3 chr19c_29 . CDS 135306 135367 . - 0 ID=Thaps25544;Parent=Thaps25544;rank=2 chr19c_29 . exon 135306 135367 . - . ID=Thaps25544.2;Parent=Thaps25544;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 137089 137101 . - 0 ID=Thaps25544;Parent=Thaps25544;rank=1 chr19c_29 ensembl protein_coding_gene 132081 132829 . + . ID=Thaps264647;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDS9];external_name=Thaps264647;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 132081 132829 . + . ID=Thaps264647;Parent=Thaps264647;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 132081 132461 . + 0 ID=Thaps264647;Parent=Thaps264647;rank=1 chr19c_29 . exon 132081 132461 . + . ID=Thaps264647.1;Parent=Thaps264647;constitutive=1;rank=1 chr19c_29 . CDS 132591 132829 . + 0 ID=Thaps264647;Parent=Thaps264647;rank=2 chr19c_29 . exon 132591 132829 . + . ID=Thaps264647.2;Parent=Thaps264647;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 ensembl protein_coding_gene 139417 140929 . - . ID=Thaps11357;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDT1];external_name=Thaps11357;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 139417 140929 . - . ID=Thaps11357;Parent=Thaps11357;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 139417 139961 . - 0 ID=Thaps11357;Parent=Thaps11357;rank=3 chr19c_29 . exon 139417 139961 . - . ID=Thaps11357.3;Parent=Thaps11357;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 140170 140827 . - 0 ID=Thaps11357;Parent=Thaps11357;rank=2 chr19c_29 . exon 140170 140827 . - . ID=Thaps11357.2;Parent=Thaps11357;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 140888 140929 . - 0 ID=Thaps11357;Parent=Thaps11357;rank=1 chr19c_29 . exon 140888 140929 . - . ID=Thaps11357.1;Parent=Thaps11357;constitutive=1;rank=1 chr19c_29 . exon 137089 137101 . - . ID=Thaps25544.1;Parent=Thaps25544;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . repeat_region 145749 145869 . ? . description=trf chr19c_29 . repeat_region 149249 149272 . ? . description=trf chr19c_29 . repeat_region 150432 150461 . ? . description=trf chr19c_29 . repeat_region 150678 150716 . ? . description=trf chr19c_29 . repeat_region 152789 152849 . ? . description=trf chr19c_29 . repeat_region 152799 152861 . ? . description=dust chr19c_29 . repeat_region 154355 154374 . ? . description=trf chr19c_29 . repeat_region 154355 154374 . ? . description=dust chr19c_29 ensembl protein_coding_gene 149026 151454 . - . ID=Thaps11360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDT2];external_name=SIL2;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 149026 151454 . - . ID=Thaps11360;Parent=Thaps11360;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 149026 149348 . - 0 ID=Thaps11360;Parent=Thaps11360;rank=9 chr19c_29 . exon 149026 149348 . - . ID=Thaps11360.9;Parent=Thaps11360;constitutive=1;ensembl_end_phase=2;rank=9 chr19c_29 . CDS 149430 149580 . - 0 ID=Thaps11360;Parent=Thaps11360;rank=8 chr19c_29 . exon 149430 149580 . - . ID=Thaps11360.8;Parent=Thaps11360;constitutive=1;ensembl_end_phase=1;rank=8 chr19c_29 . CDS 149799 149822 . - 0 ID=Thaps11360;Parent=Thaps11360;rank=7 chr19c_29 . exon 149799 149822 . - . ID=Thaps11360.7;Parent=Thaps11360;constitutive=1;rank=7 chr19c_29 . CDS 149905 149928 . - 0 ID=Thaps11360;Parent=Thaps11360;rank=6 chr19c_29 . exon 149905 149928 . - . ID=Thaps11360.6;Parent=Thaps11360;constitutive=1;rank=6 chr19c_29 . CDS 150066 150089 . - 0 ID=Thaps11360;Parent=Thaps11360;rank=5 chr19c_29 . exon 150066 150089 . - . ID=Thaps11360.5;Parent=Thaps11360;constitutive=1;rank=5 chr19c_29 . CDS 150188 150247 . - 0 ID=Thaps11360;Parent=Thaps11360;rank=4 chr19c_29 . exon 150188 150247 . - . ID=Thaps11360.4;Parent=Thaps11360;constitutive=1;rank=4 chr19c_29 . CDS 150338 150957 . - 0 ID=Thaps11360;Parent=Thaps11360;rank=3 chr19c_29 . exon 150338 150957 . - . ID=Thaps11360.3;Parent=Thaps11360;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 151108 151258 . - 0 ID=Thaps11360;Parent=Thaps11360;rank=2 chr19c_29 . exon 151108 151258 . - . ID=Thaps11360.2;Parent=Thaps11360;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 151374 151454 . - 0 ID=Thaps11360;Parent=Thaps11360;rank=1 chr19c_29 . exon 151374 151454 . - . ID=Thaps11360.1;Parent=Thaps11360;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 152128 156454 . - . ID=Thaps25547;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDT3];external_name=Thaps25547;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 152128 156454 . - . ID=Thaps25547;Parent=Thaps25547;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 152128 152690 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=12 chr19c_29 . exon 152128 152690 . - . ID=Thaps25547.12;Parent=Thaps25547;constitutive=1;ensembl_end_phase=2;rank=12 chr19c_29 . CDS 152775 152873 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=11 chr19c_29 . exon 152775 152873 . - . ID=Thaps25547.11;Parent=Thaps25547;constitutive=1;rank=11 chr19c_29 . CDS 152949 153005 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=10 chr19c_29 . exon 152949 153005 . - . ID=Thaps25547.10;Parent=Thaps25547;constitutive=1;rank=10 chr19c_29 . CDS 153101 153163 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=9 chr19c_29 . exon 153101 153163 . - . ID=Thaps25547.9;Parent=Thaps25547;constitutive=1;rank=9 chr19c_29 . CDS 153247 153309 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=8 chr19c_29 . exon 153247 153309 . - . ID=Thaps25547.8;Parent=Thaps25547;constitutive=1;rank=8 chr19c_29 . CDS 153387 153476 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=7 chr19c_29 . exon 153387 153476 . - . ID=Thaps25547.7;Parent=Thaps25547;constitutive=1;rank=7 chr19c_29 . CDS 153560 153646 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=6 chr19c_29 . exon 153560 153646 . - . ID=Thaps25547.6;Parent=Thaps25547;constitutive=1;rank=6 chr19c_29 . CDS 153723 153755 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=5 chr19c_29 . exon 153723 153755 . - . ID=Thaps25547.5;Parent=Thaps25547;constitutive=1;rank=5 chr19c_29 . CDS 153845 153977 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=4 chr19c_29 . exon 153845 153977 . - . ID=Thaps25547.4;Parent=Thaps25547;constitutive=1;ensembl_end_phase=1;rank=4 chr19c_29 . CDS 154054 155243 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=3 chr19c_29 . exon 154054 155243 . - . ID=Thaps25547.3;Parent=Thaps25547;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 155320 155839 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=2 chr19c_29 . CDS 156068 156454 . - 0 ID=Thaps25547;Parent=Thaps25547;rank=1 chr19c_29 . biological_region 158919 158922 0.999 + . logic_name=eponine chr19c_29 . biological_region 158987 158990 0.999 - . logic_name=eponine chr19c_29 ensembl protein_coding_gene 160653 161918 . - . ID=Thaps11364;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDT4];external_name=Thaps11364;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 160653 161918 . - . ID=Thaps11364;Parent=Thaps11364;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 160653 161918 . - 0 ID=Thaps11364;Parent=Thaps11364;rank=1 chr19c_29 . exon 160653 161918 . - . ID=Thaps11364.1;Parent=Thaps11364;constitutive=1;rank=1 chr19c_29 . exon 155320 155839 . - . ID=Thaps25547.2;Parent=Thaps25547;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . exon 156068 156454 . - . ID=Thaps25547.1;Parent=Thaps25547;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 162343 167667 . + . ID=Thaps25548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDT5];external_name=Thaps25548;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 162343 167667 . + . ID=Thaps25548;Parent=Thaps25548;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 162343 167667 . + 0 ID=Thaps25548;Parent=Thaps25548;rank=1 chr19c_29 . exon 162343 167667 . + . ID=Thaps25548.1;Parent=Thaps25548;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 170283 171889 . - . ID=Thaps11366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDT6];external_name=Thaps11366;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 170283 171889 . - . ID=Thaps11366;Parent=Thaps11366;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 170283 170294 . - 0 ID=Thaps11366;Parent=Thaps11366;rank=6 chr19c_29 . exon 170283 170294 . - . ID=Thaps11366.6;Parent=Thaps11366;constitutive=1;rank=6 chr19c_29 . CDS 170333 170392 . - 0 ID=Thaps11366;Parent=Thaps11366;rank=5 chr19c_29 . exon 170333 170392 . - . ID=Thaps11366.5;Parent=Thaps11366;constitutive=1;rank=5 chr19c_29 . CDS 170483 171024 . - 0 ID=Thaps11366;Parent=Thaps11366;rank=4 chr19c_29 . exon 170483 171024 . - . ID=Thaps11366.4;Parent=Thaps11366;constitutive=1;ensembl_end_phase=2;rank=4 chr19c_29 . CDS 171172 171322 . - 0 ID=Thaps11366;Parent=Thaps11366;rank=3 chr19c_29 . exon 171172 171322 . - . ID=Thaps11366.3;Parent=Thaps11366;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 171439 171546 . - 0 ID=Thaps11366;Parent=Thaps11366;rank=2 chr19c_29 . exon 171439 171546 . - . ID=Thaps11366.2;Parent=Thaps11366;constitutive=1;rank=2 chr19c_29 . CDS 171830 171889 . - 0 ID=Thaps11366;Parent=Thaps11366;rank=1 chr19c_29 . exon 171830 171889 . - . ID=Thaps11366.1;Parent=Thaps11366;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 172258 175928 . + . ID=Thaps11367;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDT7];external_name=Thaps11367;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 172258 175928 . + . ID=Thaps11367;Parent=Thaps11367;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 172258 174985 . + 0 ID=Thaps11367;Parent=Thaps11367;rank=1 chr19c_29 . exon 172258 174985 . + . ID=Thaps11367.1;Parent=Thaps11367;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 175029 175777 . + 0 ID=Thaps11367;Parent=Thaps11367;rank=2 chr19c_29 . CDS 175899 175928 . + 0 ID=Thaps11367;Parent=Thaps11367;rank=3 chr19c_29 . repeat_region 176125 176164 . ? . description=dust chr19c_29 . repeat_region 176139 176165 . ? . description=trf chr19c_29 . repeat_region 181920 182074 . ? . description=trf chr19c_29 . repeat_region 183711 183797 . ? . description=trf chr19c_29 . exon 175029 175777 . + . ID=Thaps11367.2;Parent=Thaps11367;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . exon 175899 175928 . + . ID=Thaps11367.3;Parent=Thaps11367;constitutive=1;rank=3 chr19c_29 ensembl protein_coding_gene 178866 182186 . - . ID=Thaps25550;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU0];external_name=Thaps25550;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 178866 182186 . - . ID=Thaps25550;Parent=Thaps25550;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 178866 178871 . - 0 ID=Thaps25550;Parent=Thaps25550;rank=7 chr19c_29 . exon 178866 178871 . - . ID=Thaps25550.7;Parent=Thaps25550;constitutive=1;rank=7 chr19c_29 . CDS 178957 179460 . - 0 ID=Thaps25550;Parent=Thaps25550;rank=6 chr19c_29 . exon 178957 179460 . - . ID=Thaps25550.6;Parent=Thaps25550;constitutive=1;rank=6 chr19c_29 . CDS 179505 179528 . - 0 ID=Thaps25550;Parent=Thaps25550;rank=5 chr19c_29 . exon 179505 179528 . - . ID=Thaps25550.5;Parent=Thaps25550;constitutive=1;rank=5 chr19c_29 . CDS 179631 180320 . - 0 ID=Thaps25550;Parent=Thaps25550;rank=4 chr19c_29 . exon 179631 180320 . - . ID=Thaps25550.4;Parent=Thaps25550;constitutive=1;rank=4 chr19c_29 . CDS 180455 181411 . - 0 ID=Thaps25550;Parent=Thaps25550;rank=3 chr19c_29 . exon 180455 181411 . - . ID=Thaps25550.3;Parent=Thaps25550;constitutive=1;rank=3 chr19c_29 . CDS 181520 182074 . - 0 ID=Thaps25550;Parent=Thaps25550;rank=2 chr19c_29 . exon 181520 182074 . - . ID=Thaps25550.2;Parent=Thaps25550;constitutive=1;rank=2 chr19c_29 . CDS 182151 182186 . - 0 ID=Thaps25550;Parent=Thaps25550;rank=1 chr19c_29 . exon 182151 182186 . - . ID=Thaps25550.1;Parent=Thaps25550;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 177665 177954 . - . ID=Thaps264651;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDT9];external_name=Thaps264651;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 177665 177954 . - . ID=Thaps264651;Parent=Thaps264651;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 177665 177835 . - 0 ID=Thaps264651;Parent=Thaps264651;rank=2 chr19c_29 . exon 177665 177835 . - . ID=Thaps264651.2;Parent=Thaps264651;constitutive=1;rank=2 chr19c_29 . CDS 177872 177954 . - 0 ID=Thaps264651;Parent=Thaps264651;rank=1 chr19c_29 . exon 177872 177954 . - . ID=Thaps264651.1;Parent=Thaps264651;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 ensembl protein_coding_gene 176183 177538 . + . ID=Thaps270004;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDT8];external_name=Thaps270004;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 176183 177538 . + . ID=Thaps270004;Parent=Thaps270004;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 176183 176498 . + 0 ID=Thaps270004;Parent=Thaps270004;rank=1 chr19c_29 . exon 176183 176498 . + . ID=Thaps270004.1;Parent=Thaps270004;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 176610 177538 . + 0 ID=Thaps270004;Parent=Thaps270004;rank=2 chr19c_29 . exon 176610 177538 . + . ID=Thaps270004.2;Parent=Thaps270004;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 ensembl protein_coding_gene 186066 188558 . + . ID=Thaps11371;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU2];external_name=Thaps11371;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 186066 188558 . + . ID=Thaps11371;Parent=Thaps11371;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 186066 188558 . + 0 ID=Thaps11371;Parent=Thaps11371;rank=1 chr19c_29 . exon 186066 188558 . + . ID=Thaps11371.1;Parent=Thaps11371;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 189258 190229 . + . ID=Thaps11372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU3];external_name=Thaps11372;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 189258 190229 . + . ID=Thaps11372;Parent=Thaps11372;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 189258 190229 . + 0 ID=Thaps11372;Parent=Thaps11372;rank=1 chr19c_29 . exon 189258 190229 . + . ID=Thaps11372.1;Parent=Thaps11372;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 190368 192266 . - . ID=Thaps11373;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU4];external_name=Thaps11373;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 190368 192266 . - . ID=Thaps11373;Parent=Thaps11373;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 190368 190699 . - 0 ID=Thaps11373;Parent=Thaps11373;rank=3 chr19c_29 . exon 190368 190699 . - . ID=Thaps11373.3;Parent=Thaps11373;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 190779 191006 . - 0 ID=Thaps11373;Parent=Thaps11373;rank=2 chr19c_29 . exon 190779 191006 . - . ID=Thaps11373.2;Parent=Thaps11373;constitutive=1;rank=2 chr19c_29 . CDS 191051 192266 . - 0 ID=Thaps11373;Parent=Thaps11373;rank=1 chr19c_29 . exon 191051 192266 . - . ID=Thaps11373.1;Parent=Thaps11373;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 ensembl protein_coding_gene 185020 185538 . + . ID=Thaps25551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU1];external_name=Thaps25551;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 185020 185538 . + . ID=Thaps25551;Parent=Thaps25551;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 185020 185538 . + 0 ID=Thaps25551;Parent=Thaps25551;rank=1 chr19c_29 . exon 185020 185538 . + . ID=Thaps25551.1;Parent=Thaps25551;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 193021 195641 . + . ID=Thaps38363;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU5];external_name=Thaps38363;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 193021 195641 . + . ID=Thaps38363;Parent=Thaps38363;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 193021 193152 . + 0 ID=Thaps38363;Parent=Thaps38363;rank=1 chr19c_29 . exon 193021 193152 . + . ID=Thaps38363.1;Parent=Thaps38363;constitutive=1;rank=1 chr19c_29 . CDS 193233 194082 . + 0 ID=Thaps38363;Parent=Thaps38363;rank=2 chr19c_29 . exon 193233 194082 . + . ID=Thaps38363.2;Parent=Thaps38363;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 194200 195641 . + 0 ID=Thaps38363;Parent=Thaps38363;rank=3 chr19c_29 ensembl protein_coding_gene 203384 205714 . + . ID=Thaps11375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU6];external_name=Thaps11375;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 203384 205714 . + . ID=Thaps11375;Parent=Thaps11375;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 203384 204654 . + 0 ID=Thaps11375;Parent=Thaps11375;rank=1 chr19c_29 . exon 203384 204654 . + . ID=Thaps11375.1;Parent=Thaps11375;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 . CDS 204729 205524 . + 0 ID=Thaps11375;Parent=Thaps11375;rank=2 chr19c_29 . CDS 205574 205714 . + 0 ID=Thaps11375;Parent=Thaps11375;rank=3 chr19c_29 . exon 194200 195641 . + . ID=Thaps38363.3;Parent=Thaps38363;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . exon 204729 205524 . + . ID=Thaps11375.2;Parent=Thaps11375;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . exon 205574 205714 . + . ID=Thaps11375.3;Parent=Thaps11375;constitutive=1;rank=3 chr19c_29 ensembl protein_coding_gene 208119 209978 . + . ID=Thaps11377;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU8];external_name=Thaps11377;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 208119 209978 . + . ID=Thaps11377;Parent=Thaps11377;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 208119 209978 . + 0 ID=Thaps11377;Parent=Thaps11377;rank=1 chr19c_29 . exon 208119 209978 . + . ID=Thaps11377.1;Parent=Thaps11377;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 206075 207697 . - . ID=Thaps25552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU7];external_name=Thaps25552;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 206075 207697 . - . ID=Thaps25552;Parent=Thaps25552;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 206075 207697 . - 0 ID=Thaps25552;Parent=Thaps25552;rank=1 chr19c_29 . exon 206075 207697 . - . ID=Thaps25552.1;Parent=Thaps25552;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 210706 212506 . - . ID=Thaps25553;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDU9];external_name=Thaps25553;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 210706 212506 . - . ID=Thaps25553;Parent=Thaps25553;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 210706 211006 . - 0 ID=Thaps25553;Parent=Thaps25553;rank=4 chr19c_29 . exon 210706 211006 . - . ID=Thaps25553.4;Parent=Thaps25553;constitutive=1;ensembl_end_phase=1;rank=4 chr19c_29 . CDS 211112 211556 . - 0 ID=Thaps25553;Parent=Thaps25553;rank=3 chr19c_29 . exon 211112 211556 . - . ID=Thaps25553.3;Parent=Thaps25553;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 211641 211709 . - 0 ID=Thaps25553;Parent=Thaps25553;rank=2 chr19c_29 . exon 211641 211709 . - . ID=Thaps25553.2;Parent=Thaps25553;constitutive=1;rank=2 chr19c_29 . CDS 211807 212506 . - 0 ID=Thaps25553;Parent=Thaps25553;rank=1 chr19c_29 . exon 211807 212506 . - . ID=Thaps25553.1;Parent=Thaps25553;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . repeat_region 214458 214774 . + . description=TE1A_TP chr19c_29 . repeat_region 215119 215157 . ? . description=dust chr19c_29 . repeat_region 215161 216595 . - . description=RTE1_TP chr19c_29 . repeat_region 216596 216859 . - . description=RTE1_TP chr19c_29 . repeat_region 217430 217468 . ? . description=trf chr19c_29 ensembl protein_coding_gene 218469 220112 . - . ID=Thaps25555;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV0];external_name=Thaps25555;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 218469 220112 . - . ID=Thaps25555;Parent=Thaps25555;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 218469 220112 . - 0 ID=Thaps25555;Parent=Thaps25555;rank=1 chr19c_29 . exon 218469 220112 . - . ID=Thaps25555.1;Parent=Thaps25555;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 221345 224868 . + . ID=Thaps264653;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV1];external_name=Thaps264653;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 221345 224868 . + . ID=Thaps264653;Parent=Thaps264653;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 221345 221761 . + 0 ID=Thaps264653;Parent=Thaps264653;rank=1 chr19c_29 . exon 221345 221761 . + . ID=Thaps264653.1;Parent=Thaps264653;constitutive=1;rank=1 chr19c_29 . CDS 221843 222782 . + 0 ID=Thaps264653;Parent=Thaps264653;rank=2 chr19c_29 . exon 221843 222782 . + . ID=Thaps264653.2;Parent=Thaps264653;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 222877 223452 . + 0 ID=Thaps264653;Parent=Thaps264653;rank=3 chr19c_29 . exon 222877 223452 . + . ID=Thaps264653.3;Parent=Thaps264653;constitutive=1;rank=3 chr19c_29 . CDS 223530 223606 . + 0 ID=Thaps264653;Parent=Thaps264653;rank=4 chr19c_29 . CDS 223686 223967 . + 0 ID=Thaps264653;Parent=Thaps264653;rank=5 chr19c_29 . CDS 224061 224752 . + 0 ID=Thaps264653;Parent=Thaps264653;rank=6 chr19c_29 . CDS 224792 224868 . + 0 ID=Thaps264653;Parent=Thaps264653;rank=7 chr19c_29 ensembl protein_coding_gene 226034 226760 . + . ID=Thaps11383;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV3];external_name=Thaps11383;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 226034 226760 . + . ID=Thaps11383;Parent=Thaps11383;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 226034 226099 . + 0 ID=Thaps11383;Parent=Thaps11383;rank=1 chr19c_29 . exon 226034 226099 . + . ID=Thaps11383.1;Parent=Thaps11383;constitutive=1;rank=1 chr19c_29 . CDS 226263 226285 . + 0 ID=Thaps11383;Parent=Thaps11383;rank=2 chr19c_29 . exon 226263 226285 . + . ID=Thaps11383.2;Parent=Thaps11383;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 226373 226760 . + 0 ID=Thaps11383;Parent=Thaps11383;rank=3 chr19c_29 . exon 226373 226760 . + . ID=Thaps11383.3;Parent=Thaps11383;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 ensembl protein_coding_gene 224928 225770 . - . ID=Thaps25556;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV2];external_name=Thaps25556;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 224928 225770 . - . ID=Thaps25556;Parent=Thaps25556;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 224928 225770 . - 0 ID=Thaps25556;Parent=Thaps25556;rank=1 chr19c_29 . exon 224928 225770 . - . ID=Thaps25556.1;Parent=Thaps25556;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 226863 229786 . - . ID=Thaps25557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV4];external_name=Thaps25557;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 226863 229786 . - . ID=Thaps25557;Parent=Thaps25557;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 226863 227038 . - 0 ID=Thaps25557;Parent=Thaps25557;rank=4 chr19c_29 . exon 226863 227038 . - . ID=Thaps25557.4;Parent=Thaps25557;constitutive=1;ensembl_end_phase=2;rank=4 chr19c_29 . CDS 227130 227841 . - 0 ID=Thaps25557;Parent=Thaps25557;rank=3 chr19c_29 . exon 227130 227841 . - . ID=Thaps25557.3;Parent=Thaps25557;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 227969 228521 . - 0 ID=Thaps25557;Parent=Thaps25557;rank=2 chr19c_29 . exon 227969 228521 . - . ID=Thaps25557.2;Parent=Thaps25557;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 228654 229786 . - 0 ID=Thaps25557;Parent=Thaps25557;rank=1 chr19c_29 . exon 228654 229786 . - . ID=Thaps25557.1;Parent=Thaps25557;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 ensembl protein_coding_gene 231573 233741 . + . ID=Thaps25558;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV5];external_name=Thaps25558;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 231573 233741 . + . ID=Thaps25558;Parent=Thaps25558;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 231573 232860 . + 0 ID=Thaps25558;Parent=Thaps25558;rank=1 chr19c_29 . exon 231573 232860 . + . ID=Thaps25558.1;Parent=Thaps25558;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 232954 233741 . + 0 ID=Thaps25558;Parent=Thaps25558;rank=2 chr19c_29 . exon 232954 233741 . + . ID=Thaps25558.2;Parent=Thaps25558;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . exon 223530 223606 . + . ID=Thaps264653.4;Parent=Thaps264653;constitutive=1;ensembl_end_phase=2;rank=4 chr19c_29 . exon 223686 223967 . + . ID=Thaps264653.5;Parent=Thaps264653;constitutive=1;rank=5 chr19c_29 . exon 224061 224752 . + . ID=Thaps264653.6;Parent=Thaps264653;constitutive=1;ensembl_end_phase=2;rank=6 chr19c_29 . exon 224792 224868 . + . ID=Thaps264653.7;Parent=Thaps264653;constitutive=1;ensembl_end_phase=2;rank=7 chr19c_29 . repeat_region 235177 235220 . ? . description=dust chr19c_29 . repeat_region 235178 235220 . ? . description=trf chr19c_29 . repeat_region 235178 235220 . ? . description=trf chr19c_29 . repeat_region 235919 235926 . ? . description=dust chr19c_29 . repeat_region 238845 238855 . ? . description=dust chr19c_29 . repeat_region 242000 242097 . - . description=MuDR1_TP chr19c_29 ensembl protein_coding_gene 234529 235641 . - . ID=Thaps11386;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV6];external_name=Thaps11386;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 234529 235641 . - . ID=Thaps11386;Parent=Thaps11386;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 234529 234704 . - 0 ID=Thaps11386;Parent=Thaps11386;rank=2 chr19c_29 . exon 234529 234704 . - . ID=Thaps11386.2;Parent=Thaps11386;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 234843 235641 . - 0 ID=Thaps11386;Parent=Thaps11386;rank=1 chr19c_29 . exon 234843 235641 . - . ID=Thaps11386.1;Parent=Thaps11386;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 ensembl protein_coding_gene 236144 238591 . + . ID=Thaps11387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV7];external_name=Thaps11387;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 236144 238591 . + . ID=Thaps11387;Parent=Thaps11387;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 236144 237703 . + 0 ID=Thaps11387;Parent=Thaps11387;rank=1 chr19c_29 . exon 236144 237703 . + . ID=Thaps11387.1;Parent=Thaps11387;constitutive=1;rank=1 chr19c_29 . CDS 237797 238591 . + 0 ID=Thaps11387;Parent=Thaps11387;rank=2 chr19c_29 . exon 237797 238591 . + . ID=Thaps11387.2;Parent=Thaps11387;constitutive=1;rank=2 chr19c_29 ensembl protein_coding_gene 242234 244006 . + . ID=Thaps25560;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV9];external_name=Thaps25560;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 242234 244006 . + . ID=Thaps25560;Parent=Thaps25560;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 242234 244006 . + 0 ID=Thaps25560;Parent=Thaps25560;rank=1 chr19c_29 . exon 242234 244006 . + . ID=Thaps25560.1;Parent=Thaps25560;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 238909 240195 . - . ID=Thaps270005;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDV8];external_name=Thaps270005;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 238909 240195 . - . ID=Thaps270005;Parent=Thaps270005;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 238909 240098 . - 0 ID=Thaps270005;Parent=Thaps270005;rank=2 chr19c_29 . exon 238909 240098 . - . ID=Thaps270005.2;Parent=Thaps270005;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 240177 240195 . - 0 ID=Thaps270005;Parent=Thaps270005;rank=1 chr19c_29 . exon 240177 240195 . - . ID=Thaps270005.1;Parent=Thaps270005;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . repeat_region 247668 247918 . - . description=Copia2LTR_TP chr19c_29 ensembl protein_coding_gene 245382 247421 . + . ID=Thaps11390;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDW0];external_name=Thaps11390;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 245382 247421 . + . ID=Thaps11390;Parent=Thaps11390;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 245382 247421 . + 0 ID=Thaps11390;Parent=Thaps11390;rank=1 chr19c_29 . exon 245382 247421 . + . ID=Thaps11390.1;Parent=Thaps11390;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 248089 250047 . - . ID=Thaps11391;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDW1];external_name=Thaps11391;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 248089 250047 . - . ID=Thaps11391;Parent=Thaps11391;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 248089 248169 . - 0 ID=Thaps11391;Parent=Thaps11391;rank=2 chr19c_29 . exon 248089 248169 . - . ID=Thaps11391.2;Parent=Thaps11391;constitutive=1;rank=2 chr19c_29 . CDS 248335 250047 . - 0 ID=Thaps11391;Parent=Thaps11391;rank=1 chr19c_29 . exon 248335 250047 . - . ID=Thaps11391.1;Parent=Thaps11391;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 250200 252162 . - . ID=Thaps11392;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDW2];external_name=Thaps11392;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 250200 252162 . - . ID=Thaps11392;Parent=Thaps11392;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 250200 250953 . - 0 ID=Thaps11392;Parent=Thaps11392;rank=3 chr19c_29 . exon 250200 250953 . - . ID=Thaps11392.3;Parent=Thaps11392;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 250997 251795 . - 0 ID=Thaps11392;Parent=Thaps11392;rank=2 chr19c_29 . exon 250997 251795 . - . ID=Thaps11392.2;Parent=Thaps11392;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 252033 252162 . - 0 ID=Thaps11392;Parent=Thaps11392;rank=1 chr19c_29 . exon 252033 252162 . - . ID=Thaps11392.1;Parent=Thaps11392;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . repeat_region 252683 252699 . ? . description=dust chr19c_29 . repeat_region 259160 259189 . ? . description=trf chr19c_29 . repeat_region 259160 259196 . ? . description=dust chr19c_29 ensembl protein_coding_gene 257280 258551 . - . ID=Thaps11394;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDW4];external_name=Thaps11394;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 257280 258551 . - . ID=Thaps11394;Parent=Thaps11394;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 257280 258551 . - 0 ID=Thaps11394;Parent=Thaps11394;rank=1 chr19c_29 . exon 257280 258551 . - . ID=Thaps11394.1;Parent=Thaps11394;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 254023 257098 . + . ID=Thaps264655;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDW3];external_name=Thaps264655;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 254023 257098 . + . ID=Thaps264655;Parent=Thaps264655;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 254023 254316 . + 0 ID=Thaps264655;Parent=Thaps264655;rank=1 chr19c_29 . exon 254023 254316 . + . ID=Thaps264655.1;Parent=Thaps264655;constitutive=1;rank=1 chr19c_29 . CDS 254428 254587 . + 0 ID=Thaps264655;Parent=Thaps264655;rank=2 chr19c_29 . exon 254428 254587 . + . ID=Thaps264655.2;Parent=Thaps264655;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 254639 256353 . + 0 ID=Thaps264655;Parent=Thaps264655;rank=3 chr19c_29 . exon 254639 256353 . + . ID=Thaps264655.3;Parent=Thaps264655;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 256442 257098 . + 0 ID=Thaps264655;Parent=Thaps264655;rank=4 chr19c_29 . exon 256442 257098 . + . ID=Thaps264655.4;Parent=Thaps264655;constitutive=1;rank=4 chr19c_29 ensembl protein_coding_gene 261259 262080 . + . ID=Thaps264656;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDW5];external_name=Thaps264656;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 261259 262080 . + . ID=Thaps264656;Parent=Thaps264656;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 261259 261830 . + 0 ID=Thaps264656;Parent=Thaps264656;rank=1 chr19c_29 . exon 261259 261830 . + . ID=Thaps264656.1;Parent=Thaps264656;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 . CDS 261943 262080 . + 0 ID=Thaps264656;Parent=Thaps264656;rank=2 chr19c_29 . exon 261943 262080 . + . ID=Thaps264656.2;Parent=Thaps264656;constitutive=1;rank=2 chr19c_29 ensembl protein_coding_gene 265838 267283 . - . ID=Thaps11397;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDW7];external_name=Thaps11397;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 265838 267283 . - . ID=Thaps11397;Parent=Thaps11397;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 265838 266231 . - 0 ID=Thaps11397;Parent=Thaps11397;rank=3 chr19c_29 . exon 265838 266231 . - . ID=Thaps11397.3;Parent=Thaps11397;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 266316 266759 . - 0 ID=Thaps11397;Parent=Thaps11397;rank=2 chr19c_29 . exon 266316 266759 . - . ID=Thaps11397.2;Parent=Thaps11397;constitutive=1;rank=2 chr19c_29 . CDS 266901 267283 . - 0 ID=Thaps11397;Parent=Thaps11397;rank=1 chr19c_29 . exon 266901 267283 . - . ID=Thaps11397.1;Parent=Thaps11397;constitutive=1;ensembl_end_phase=2;rank=1 chr19c_29 ensembl protein_coding_gene 265021 265363 . + . ID=Thaps38361;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDW6];external_name=Thaps38361;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 265021 265363 . + . ID=Thaps38361;Parent=Thaps38361;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 265021 265191 . + 0 ID=Thaps38361;Parent=Thaps38361;rank=1 chr19c_29 . exon 265021 265191 . + . ID=Thaps38361.1;Parent=Thaps38361;constitutive=1;rank=1 chr19c_29 . CDS 265247 265363 . + 0 ID=Thaps38361;Parent=Thaps38361;rank=2 chr19c_29 . exon 265247 265363 . + . ID=Thaps38361.2;Parent=Thaps38361;constitutive=1;rank=2 chr19c_29 ensembl protein_coding_gene 268582 270014 . + . ID=Thaps42867;biotype=protein_coding;description=Cytochrome c1 [Source:UniProtKB/TrEMBL%3BAcc:B8LDW8];external_name=Thaps42867;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 268582 270014 . + . ID=Thaps42867;Parent=Thaps42867;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 268582 268605 . + 0 ID=Thaps42867;Parent=Thaps42867;rank=1 chr19c_29 . exon 268582 268605 . + . ID=Thaps42867.1;Parent=Thaps42867;constitutive=1;rank=1 chr19c_29 . CDS 269072 269736 . + 0 ID=Thaps42867;Parent=Thaps42867;rank=2 chr19c_29 . exon 269072 269736 . + . ID=Thaps42867.2;Parent=Thaps42867;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 269870 270014 . + 0 ID=Thaps42867;Parent=Thaps42867;rank=3 chr19c_29 . exon 269870 270014 . + . ID=Thaps42867.3;Parent=Thaps42867;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . repeat_region 273615 273949 . - . description=Gypsy2I_TP chr19c_29 . repeat_region 280760 280791 . ? . description=dust chr19c_29 . repeat_region 280760 280796 . ? . description=trf chr19c_29 ensembl protein_coding_gene 272008 272448 . + . ID=Thaps11399;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDW9];external_name=Thaps11399;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 272008 272448 . + . ID=Thaps11399;Parent=Thaps11399;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 272008 272448 . + 0 ID=Thaps11399;Parent=Thaps11399;rank=1 chr19c_29 . exon 272008 272448 . + . ID=Thaps11399.1;Parent=Thaps11399;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 275724 277808 . + . ID=Thaps11401;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDX1];external_name=Thaps11401;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 275724 277808 . + . ID=Thaps11401;Parent=Thaps11401;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 275724 276024 . + 0 ID=Thaps11401;Parent=Thaps11401;rank=1 chr19c_29 . exon 275724 276024 . + . ID=Thaps11401.1;Parent=Thaps11401;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 276111 276382 . + 0 ID=Thaps11401;Parent=Thaps11401;rank=2 chr19c_29 . exon 276111 276382 . + . ID=Thaps11401.2;Parent=Thaps11401;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . CDS 276468 276831 . + 0 ID=Thaps11401;Parent=Thaps11401;rank=3 chr19c_29 . exon 276468 276831 . + . ID=Thaps11401.3;Parent=Thaps11401;constitutive=1;ensembl_end_phase=1;rank=3 chr19c_29 . CDS 276908 277122 . + 0 ID=Thaps11401;Parent=Thaps11401;rank=4 chr19c_29 . exon 276908 277122 . + . ID=Thaps11401.4;Parent=Thaps11401;constitutive=1;ensembl_end_phase=2;rank=4 chr19c_29 . CDS 277197 277808 . + 0 ID=Thaps11401;Parent=Thaps11401;rank=5 chr19c_29 . exon 277197 277808 . + . ID=Thaps11401.5;Parent=Thaps11401;constitutive=1;rank=5 chr19c_29 ensembl protein_coding_gene 273955 275211 . + . ID=Thaps25565;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDX0];external_name=Thaps25565;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 273955 275211 . + . ID=Thaps25565;Parent=Thaps25565;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 273955 275211 . + 0 ID=Thaps25565;Parent=Thaps25565;rank=1 chr19c_29 . exon 273955 275211 . + . ID=Thaps25565.1;Parent=Thaps25565;constitutive=1;rank=1 chr19c_29 ensembl protein_coding_gene 278036 278743 . - . ID=Thaps270007;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDX2];external_name=Thaps270007;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 278036 278743 . - . ID=Thaps270007;Parent=Thaps270007;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 278036 278743 . - 0 ID=Thaps270007;Parent=Thaps270007;rank=1 chr19c_29 . exon 278036 278743 . - . ID=Thaps270007.1;Parent=Thaps270007;constitutive=1;rank=1 chr19c_29 . repeat_region 286058 286142 . + . description=SAT1_TP chr19c_29 . repeat_region 286143 286295 . + . description=SAT1_TP chr19c_29 . repeat_region 286293 286460 . + . description=SAT1_TP chr19c_29 . repeat_region 286475 286630 . + . description=SAT1_TP chr19c_29 . repeat_region 286632 286805 . + . description=SAT1_TP chr19c_29 . repeat_region 286806 286978 . + . description=SAT1_TP chr19c_29 . repeat_region 286980 287153 . + . description=SAT1_TP chr19c_29 . repeat_region 290068 290139 . + . description=Harbinger2_TP chr19c_29 ensembl protein_coding_gene 288250 289137 . + . ID=Thaps11403;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C422];external_name=Thaps11403;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 288250 289137 . + . ID=Thaps11403;Parent=Thaps11403;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 288250 288379 . + 0 ID=Thaps11403;Parent=Thaps11403;rank=1 chr19c_29 . exon 288250 288379 . + . ID=Thaps11403.1;Parent=Thaps11403;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 . CDS 288463 288550 . + 0 ID=Thaps11403;Parent=Thaps11403;rank=2 chr19c_29 . exon 288463 288550 . + . ID=Thaps11403.2;Parent=Thaps11403;constitutive=1;ensembl_end_phase=1;rank=2 chr19c_29 . CDS 288643 288674 . + 0 ID=Thaps11403;Parent=Thaps11403;rank=3 chr19c_29 . exon 288643 288674 . + . ID=Thaps11403.3;Parent=Thaps11403;constitutive=1;ensembl_end_phase=2;rank=3 chr19c_29 . CDS 288754 288835 . + 0 ID=Thaps11403;Parent=Thaps11403;rank=4 chr19c_29 . exon 288754 288835 . + . ID=Thaps11403.4;Parent=Thaps11403;constitutive=1;ensembl_end_phase=1;rank=4 chr19c_29 . CDS 288933 289137 . + 0 ID=Thaps11403;Parent=Thaps11403;rank=5 chr19c_29 . exon 288933 289137 . + . ID=Thaps11403.5;Parent=Thaps11403;constitutive=1;ensembl_end_phase=1;rank=5 chr19c_29 ensembl protein_coding_gene 290189 291104 . + . ID=Thaps11404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDX4];external_name=Thaps11404;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 290189 291104 . + . ID=Thaps11404;Parent=Thaps11404;biotype=protein_coding;logic_name=jgi_thaps3 chr19c_29 . CDS 290189 291104 . + 0 ID=Thaps11404;Parent=Thaps11404;rank=1 chr19c_29 . exon 290189 291104 . + . ID=Thaps11404.1;Parent=Thaps11404;constitutive=1;ensembl_end_phase=1;rank=1 chr19c_29 ensembl gene 286058 287047 . + . ID=Thaps264659;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr19c_29 ensembl transcript 286058 287047 . + . ID=Thaps264659;Parent=Thaps264659;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr19c_29 . exon 286058 286150 . + . ID=Thaps264659.1;Parent=Thaps264659;constitutive=1;rank=1 chr19c_29 . exon 286478 286647 . + . ID=Thaps264659.2;Parent=Thaps264659;constitutive=1;ensembl_end_phase=2;rank=2 chr19c_29 . exon 286995 287047 . + . ID=Thaps264659.3;Parent=Thaps264659;constitutive=1;ensembl_end_phase=2;rank=3 ##gff-version 3 ##sequence-region 24 1 297349 chr24 . repeat_region 1 54 . ? . description=trf chr24 . repeat_region 1 54 . ? . description=dust chr24 . repeat_region 2241 2367 . ? . description=dust chr24 . repeat_region 2272 2377 . ? . description=trf chr24 . repeat_region 2458 2643 . ? . description=trf chr24 . repeat_region 2459 2608 . ? . description=trf chr24 . repeat_region 2500 2643 . ? . description=trf chr24 . repeat_region 3036 3168 . ? . description=dust chr24 . repeat_region 3036 3170 . ? . description=trf chr24 . repeat_region 5110 5199 . ? . description=trf chr24 . repeat_region 5110 5199 . ? . description=dust chr24 . repeat_region 5280 5465 . ? . description=trf chr24 . repeat_region 5280 5465 . ? . description=trf chr24 . repeat_region 5281 5430 . ? . description=trf chr24 . repeat_region 6078 6114 . ? . description=trf chr24 . repeat_region 6448 6501 . + . description=MuDR1_TP chr24 . repeat_region 6903 7311 . + . description=Harbinger2N_TP chr24 . repeat_region 6974 7291 . ? . description=trf chr24 . repeat_region 7009 7134 . ? . description=dust chr24 . repeat_region 7010 7302 . ? . description=trf chr24 . repeat_region 7137 7322 . ? . description=dust chr24 . repeat_region 7312 7443 . + . description=Harbinger2N_TP chr24 . repeat_region 7370 7440 . ? . description=dust chr24 . repeat_region 7391 7438 . ? . description=trf chr24 . repeat_region 9239 9696 . ? . description=dust chr24 . repeat_region 9239 9700 . ? . description=trf chr24 . repeat_region 9782 9931 . ? . description=trf chr24 . repeat_region 9782 9958 . ? . description=trf chr24 . repeat_region 9820 9959 . ? . description=trf chr24 ensembl protein_coding_gene 55 1311 . - . ID=Thaps12125;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI8];external_name=Thaps12125;logic_name=jgi_thaps3 chr24 ensembl transcript 55 1311 . - . ID=Thaps12125;Parent=Thaps12125;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 55 1311 . - 0 ID=Thaps12125;Parent=Thaps12125;rank=1 chr24 . exon 55 1311 . - . ID=Thaps12125.1;Parent=Thaps12125;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 3321 4514 . - . ID=Thaps12126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI9];external_name=Thaps12126;logic_name=jgi_thaps3 chr24 ensembl transcript 3321 4514 . - . ID=Thaps12126;Parent=Thaps12126;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 3321 4145 . - 0 ID=Thaps12126;Parent=Thaps12126;rank=2 chr24 . exon 3321 4145 . - . ID=Thaps12126.2;Parent=Thaps12126;constitutive=1;rank=2 chr24 . CDS 4221 4514 . - 0 ID=Thaps12126;Parent=Thaps12126;rank=1 chr24 . exon 4221 4514 . - . ID=Thaps12126.1;Parent=Thaps12126;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 5554 6228 . - . ID=Thaps12127;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ0];external_name=Thaps12127;logic_name=jgi_thaps3 chr24 ensembl transcript 5554 6228 . - . ID=Thaps12127;Parent=Thaps12127;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 5554 6228 . - 0 ID=Thaps12127;Parent=Thaps12127;rank=1 chr24 . exon 5554 6228 . - . ID=Thaps12127.1;Parent=Thaps12127;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 10236 10712 . - . ID=Thaps12128;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ1];external_name=Thaps12128;logic_name=jgi_thaps3 chr24 ensembl transcript 10236 10712 . - . ID=Thaps12128;Parent=Thaps12128;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 10236 10712 . - 0 ID=Thaps12128;Parent=Thaps12128;rank=1 chr24 . exon 10236 10712 . - . ID=Thaps12128.1;Parent=Thaps12128;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 15860 16471 . + . ID=Thaps12130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ3];external_name=Thaps12130;logic_name=jgi_thaps3 chr24 ensembl transcript 15860 16471 . + . ID=Thaps12130;Parent=Thaps12130;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 15860 16059 . + 0 ID=Thaps12130;Parent=Thaps12130;rank=1 chr24 . exon 15860 16059 . + . ID=Thaps12130.1;Parent=Thaps12130;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . CDS 16120 16471 . + 0 ID=Thaps12130;Parent=Thaps12130;rank=2 chr24 . exon 16120 16471 . + . ID=Thaps12130.2;Parent=Thaps12130;constitutive=1;ensembl_end_phase=1;rank=2 chr24 ensembl protein_coding_gene 17990 19012 . + . ID=Thaps12131;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ4];external_name=Thaps12131;logic_name=jgi_thaps3 chr24 ensembl transcript 17990 19012 . + . ID=Thaps12131;Parent=Thaps12131;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 17990 19012 . + 0 ID=Thaps12131;Parent=Thaps12131;rank=1 chr24 . exon 17990 19012 . + . ID=Thaps12131.1;Parent=Thaps12131;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 19330 21455 . + . ID=Thaps12132;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ5];external_name=Thaps12132;logic_name=jgi_thaps3 chr24 ensembl transcript 19330 21455 . + . ID=Thaps12132;Parent=Thaps12132;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 19330 19669 . + 0 ID=Thaps12132;Parent=Thaps12132;rank=1 chr24 . exon 19330 19669 . + . ID=Thaps12132.1;Parent=Thaps12132;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . CDS 19865 20369 . + 0 ID=Thaps12132;Parent=Thaps12132;rank=2 chr24 . CDS 20498 21455 . + 0 ID=Thaps12132;Parent=Thaps12132;rank=3 chr24 ensembl protein_coding_gene 11012 14069 . - . ID=Thaps25882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ2];external_name=Thaps25882;logic_name=jgi_thaps3 chr24 ensembl transcript 11012 14069 . - . ID=Thaps25882;Parent=Thaps25882;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 11012 11300 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=17 chr24 . exon 11012 11300 . - . ID=Thaps25882.17;Parent=Thaps25882;constitutive=1;ensembl_end_phase=1;rank=17 chr24 . CDS 11388 11393 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=16 chr24 . exon 11388 11393 . - . ID=Thaps25882.16;Parent=Thaps25882;constitutive=1;rank=16 chr24 . CDS 11424 11476 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=15 chr24 . exon 11424 11476 . - . ID=Thaps25882.15;Parent=Thaps25882;constitutive=1;ensembl_end_phase=2;rank=15 chr24 . CDS 11525 11621 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=14 chr24 . exon 11525 11621 . - . ID=Thaps25882.14;Parent=Thaps25882;constitutive=1;ensembl_end_phase=1;rank=14 chr24 . CDS 11704 11748 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=13 chr24 . exon 11704 11748 . - . ID=Thaps25882.13;Parent=Thaps25882;constitutive=1;rank=13 chr24 . CDS 11857 11878 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=12 chr24 . exon 11857 11878 . - . ID=Thaps25882.12;Parent=Thaps25882;constitutive=1;ensembl_end_phase=1;rank=12 chr24 . CDS 11971 12024 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=11 chr24 . exon 11971 12024 . - . ID=Thaps25882.11;Parent=Thaps25882;constitutive=1;rank=11 chr24 . CDS 12274 12330 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=10 chr24 . exon 12274 12330 . - . ID=Thaps25882.10;Parent=Thaps25882;constitutive=1;rank=10 chr24 . CDS 12487 12504 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=9 chr24 . exon 12487 12504 . - . ID=Thaps25882.9;Parent=Thaps25882;constitutive=1;rank=9 chr24 . CDS 12612 12650 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=8 chr24 . exon 12612 12650 . - . ID=Thaps25882.8;Parent=Thaps25882;constitutive=1;rank=8 chr24 . CDS 12742 12798 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=7 chr24 . exon 12742 12798 . - . ID=Thaps25882.7;Parent=Thaps25882;constitutive=1;rank=7 chr24 . CDS 12866 12925 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=6 chr24 . exon 12866 12925 . - . ID=Thaps25882.6;Parent=Thaps25882;constitutive=1;rank=6 chr24 . CDS 12995 13051 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=5 chr24 . exon 12995 13051 . - . ID=Thaps25882.5;Parent=Thaps25882;constitutive=1;rank=5 chr24 . CDS 13158 13214 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=4 chr24 . exon 13158 13214 . - . ID=Thaps25882.4;Parent=Thaps25882;constitutive=1;rank=4 chr24 . CDS 13307 13363 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=3 chr24 . exon 13307 13363 . - . ID=Thaps25882.3;Parent=Thaps25882;constitutive=1;rank=3 chr24 . CDS 13440 13517 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=2 chr24 . exon 13440 13517 . - . ID=Thaps25882.2;Parent=Thaps25882;constitutive=1;rank=2 chr24 . CDS 13706 14069 . - 0 ID=Thaps25882;Parent=Thaps25882;rank=1 chr24 . exon 13706 14069 . - . ID=Thaps25882.1;Parent=Thaps25882;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . repeat_region 22045 22080 . ? . description=trf chr24 . repeat_region 22406 22446 . ? . description=dust chr24 . repeat_region 24010 24033 . ? . description=trf chr24 . repeat_region 24010 24070 . ? . description=dust chr24 . repeat_region 24033 24070 . ? . description=trf chr24 . repeat_region 24072 24080 . ? . description=dust chr24 . repeat_region 27092 27237 . ? . description=trf chr24 . repeat_region 27092 27237 . ? . description=trf chr24 . repeat_region 28679 28717 . ? . description=trf chr24 . repeat_region 28679 28730 . ? . description=trf chr24 . exon 19865 20369 . + . ID=Thaps12132.2;Parent=Thaps12132;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . exon 20498 21455 . + . ID=Thaps12132.3;Parent=Thaps12132;constitutive=1;ensembl_end_phase=1;rank=3 chr24 ensembl protein_coding_gene 24223 31422 . + . ID=Thaps12133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ6];external_name=Thaps12133;logic_name=jgi_thaps3 chr24 ensembl transcript 24223 31422 . + . ID=Thaps12133;Parent=Thaps12133;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 24223 24516 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=1 chr24 . exon 24223 24516 . + . ID=Thaps12133.1;Parent=Thaps12133;constitutive=1;rank=1 chr24 . CDS 24545 25417 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=2 chr24 . exon 24545 25417 . + . ID=Thaps12133.2;Parent=Thaps12133;constitutive=1;rank=2 chr24 . CDS 25493 26208 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=3 chr24 . exon 25493 26208 . + . ID=Thaps12133.3;Parent=Thaps12133;constitutive=1;ensembl_end_phase=2;rank=3 chr24 . CDS 26299 26950 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=4 chr24 . exon 26299 26950 . + . ID=Thaps12133.4;Parent=Thaps12133;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . CDS 27026 27237 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=5 chr24 . exon 27026 27237 . + . ID=Thaps12133.5;Parent=Thaps12133;constitutive=1;ensembl_end_phase=2;rank=5 chr24 . CDS 27323 27415 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=6 chr24 . exon 27323 27415 . + . ID=Thaps12133.6;Parent=Thaps12133;constitutive=1;rank=6 chr24 . CDS 27506 27565 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=7 chr24 . exon 27506 27565 . + . ID=Thaps12133.7;Parent=Thaps12133;constitutive=1;rank=7 chr24 . CDS 27657 28011 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=8 chr24 . exon 27657 28011 . + . ID=Thaps12133.8;Parent=Thaps12133;constitutive=1;ensembl_end_phase=1;rank=8 chr24 . CDS 28358 28431 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=9 chr24 . exon 28358 28431 . + . ID=Thaps12133.9;Parent=Thaps12133;constitutive=1;ensembl_end_phase=2;rank=9 chr24 . CDS 28746 28845 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=10 chr24 . exon 28746 28845 . + . ID=Thaps12133.10;Parent=Thaps12133;constitutive=1;ensembl_end_phase=1;rank=10 chr24 . CDS 28943 29020 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=11 chr24 . exon 28943 29020 . + . ID=Thaps12133.11;Parent=Thaps12133;constitutive=1;rank=11 chr24 . CDS 29251 31422 . + 0 ID=Thaps12133;Parent=Thaps12133;rank=12 chr24 . exon 29251 31422 . + . ID=Thaps12133.12;Parent=Thaps12133;constitutive=1;rank=12 chr24 ensembl protein_coding_gene 31652 32350 . - . ID=Thaps270137;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ7];external_name=Thaps270137;logic_name=jgi_thaps3 chr24 ensembl transcript 31652 32350 . - . ID=Thaps270137;Parent=Thaps270137;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 31652 32350 . - 0 ID=Thaps270137;Parent=Thaps270137;rank=1 chr24 . exon 31652 32350 . - . ID=Thaps270137.1;Parent=Thaps270137;constitutive=1;rank=1 chr24 . repeat_region 44541 44549 . ? . description=dust chr24 . repeat_region 45655 45671 . ? . description=dust chr24 ensembl protein_coding_gene 41450 42836 . + . ID=Thaps12135;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ8];external_name=Thaps12135;logic_name=jgi_thaps3 chr24 ensembl transcript 41450 42836 . + . ID=Thaps12135;Parent=Thaps12135;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 41450 41699 . + 0 ID=Thaps12135;Parent=Thaps12135;rank=1 chr24 . exon 41450 41699 . + . ID=Thaps12135.1;Parent=Thaps12135;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . CDS 41824 41960 . + 0 ID=Thaps12135;Parent=Thaps12135;rank=2 chr24 . exon 41824 41960 . + . ID=Thaps12135.2;Parent=Thaps12135;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 42070 42777 . + 0 ID=Thaps12135;Parent=Thaps12135;rank=3 chr24 . exon 42070 42777 . + . ID=Thaps12135.3;Parent=Thaps12135;constitutive=1;rank=3 chr24 . CDS 42810 42836 . + 0 ID=Thaps12135;Parent=Thaps12135;rank=4 chr24 . exon 42810 42836 . + . ID=Thaps12135.4;Parent=Thaps12135;constitutive=1;rank=4 chr24 ensembl protein_coding_gene 44841 45044 . - . ID=Thaps38925;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGJ9];external_name=Thaps38925;logic_name=jgi_thaps3 chr24 ensembl transcript 44841 45044 . - . ID=Thaps38925;Parent=Thaps38925;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 44841 45044 . - 0 ID=Thaps38925;Parent=Thaps38925;rank=1 chr24 . exon 44841 45044 . - . ID=Thaps38925.1;Parent=Thaps38925;constitutive=1;rank=1 chr24 . repeat_region 58959 58994 . ? . description=trf chr24 ensembl protein_coding_gene 49779 50476 . + . ID=Thaps12137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGK0];external_name=Thaps12137;logic_name=jgi_thaps3 chr24 ensembl transcript 49779 50476 . + . ID=Thaps12137;Parent=Thaps12137;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 49779 49937 . + 0 ID=Thaps12137;Parent=Thaps12137;rank=1 chr24 . exon 49779 49937 . + . ID=Thaps12137.1;Parent=Thaps12137;constitutive=1;rank=1 chr24 . CDS 49987 50139 . + 0 ID=Thaps12137;Parent=Thaps12137;rank=2 chr24 . exon 49987 50139 . + . ID=Thaps12137.2;Parent=Thaps12137;constitutive=1;rank=2 chr24 . CDS 50242 50261 . + 0 ID=Thaps12137;Parent=Thaps12137;rank=3 chr24 . exon 50242 50261 . + . ID=Thaps12137.3;Parent=Thaps12137;constitutive=1;ensembl_end_phase=2;rank=3 chr24 . CDS 50323 50476 . + 0 ID=Thaps12137;Parent=Thaps12137;rank=4 chr24 . exon 50323 50476 . + . ID=Thaps12137.4;Parent=Thaps12137;constitutive=1;ensembl_end_phase=1;rank=4 chr24 ensembl protein_coding_gene 58488 65185 . - . ID=Thaps12140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGK5];external_name=Thaps12140;logic_name=jgi_thaps3 chr24 ensembl transcript 58488 65185 . - . ID=Thaps12140;Parent=Thaps12140;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 58488 59505 . - 0 ID=Thaps12140;Parent=Thaps12140;rank=9 chr24 . exon 58488 59505 . - . ID=Thaps12140.9;Parent=Thaps12140;constitutive=1;ensembl_end_phase=1;rank=9 chr24 . CDS 59596 59870 . - 0 ID=Thaps12140;Parent=Thaps12140;rank=8 chr24 . CDS 59961 60029 . - 0 ID=Thaps12140;Parent=Thaps12140;rank=7 chr24 . CDS 60111 60608 . - 0 ID=Thaps12140;Parent=Thaps12140;rank=6 chr24 . CDS 60685 60834 . - 0 ID=Thaps12140;Parent=Thaps12140;rank=5 chr24 . CDS 60924 61065 . - 0 ID=Thaps12140;Parent=Thaps12140;rank=4 chr24 . CDS 61153 63265 . - 0 ID=Thaps12140;Parent=Thaps12140;rank=3 chr24 . CDS 63528 64346 . - 0 ID=Thaps12140;Parent=Thaps12140;rank=2 chr24 . CDS 64372 65185 . - 0 ID=Thaps12140;Parent=Thaps12140;rank=1 chr24 ensembl protein_coding_gene 57478 58130 . + . ID=Thaps20330;biotype=protein_coding;description=Tim9-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGK4];external_name=Thaps20330;logic_name=jgi_thaps3 chr24 ensembl transcript 57478 58130 . + . ID=Thaps20330;Parent=Thaps20330;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 57478 57578 . + 0 ID=Thaps20330;Parent=Thaps20330;rank=1 chr24 . exon 57478 57578 . + . ID=Thaps20330.1;Parent=Thaps20330;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . CDS 57980 58130 . + 0 ID=Thaps20330;Parent=Thaps20330;rank=2 chr24 . exon 57980 58130 . + . ID=Thaps20330.2;Parent=Thaps20330;constitutive=1;ensembl_end_phase=1;rank=2 chr24 ensembl protein_coding_gene 56086 56871 . + . ID=Thaps25886;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGK3];external_name=Thaps25886;logic_name=jgi_thaps3 chr24 ensembl transcript 56086 56871 . + . ID=Thaps25886;Parent=Thaps25886;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 56086 56871 . + 0 ID=Thaps25886;Parent=Thaps25886;rank=1 chr24 . exon 56086 56871 . + . ID=Thaps25886.1;Parent=Thaps25886;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 52238 54190 . + . ID=Thaps270138;biotype=protein_coding;description=Putative uncharacterized protein GLNN [Source:UniProtKB/TrEMBL%3BAcc:B8CGK1];external_name=GLNN;logic_name=jgi_thaps3 chr24 ensembl transcript 52238 54190 . + . ID=Thaps270138;Parent=Thaps270138;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 52238 54082 . + 0 ID=Thaps270138;Parent=Thaps270138;rank=1 chr24 . exon 52238 54082 . + . ID=Thaps270138.1;Parent=Thaps270138;constitutive=1;rank=1 chr24 . CDS 54161 54190 . + 0 ID=Thaps270138;Parent=Thaps270138;rank=2 chr24 . exon 54161 54190 . + . ID=Thaps270138.2;Parent=Thaps270138;constitutive=1;rank=2 chr24 ensembl protein_coding_gene 54556 55198 . - . ID=Thaps38886;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGK2];external_name=Thaps38886;logic_name=jgi_thaps3 chr24 ensembl transcript 54556 55198 . - . ID=Thaps38886;Parent=Thaps38886;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 54556 54706 . - 0 ID=Thaps38886;Parent=Thaps38886;rank=2 chr24 . exon 54556 54706 . - . ID=Thaps38886.2;Parent=Thaps38886;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 55107 55198 . - 0 ID=Thaps38886;Parent=Thaps38886;rank=1 chr24 . exon 55107 55198 . - . ID=Thaps38886.1;Parent=Thaps38886;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . repeat_region 64534 64555 . ? . description=dust chr24 . exon 59596 59870 . - . ID=Thaps12140.8;Parent=Thaps12140;constitutive=1;ensembl_end_phase=2;rank=8 chr24 . exon 59961 60029 . - . ID=Thaps12140.7;Parent=Thaps12140;constitutive=1;rank=7 chr24 . exon 60111 60608 . - . ID=Thaps12140.6;Parent=Thaps12140;constitutive=1;rank=6 chr24 . exon 60685 60834 . - . ID=Thaps12140.5;Parent=Thaps12140;constitutive=1;rank=5 chr24 . exon 60924 61065 . - . ID=Thaps12140.4;Parent=Thaps12140;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . exon 61153 63265 . - . ID=Thaps12140.3;Parent=Thaps12140;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . exon 63528 64346 . - . ID=Thaps12140.2;Parent=Thaps12140;constitutive=1;rank=2 chr24 . exon 64372 65185 . - . ID=Thaps12140.1;Parent=Thaps12140;constitutive=1;ensembl_end_phase=1;rank=1 chr24 ensembl protein_coding_gene 66673 67800 . - . ID=Thaps12141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGK6];external_name=Thaps12141;logic_name=jgi_thaps3 chr24 ensembl transcript 66673 67800 . - . ID=Thaps12141;Parent=Thaps12141;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 66673 67800 . - 0 ID=Thaps12141;Parent=Thaps12141;rank=1 chr24 . exon 66673 67800 . - . ID=Thaps12141.1;Parent=Thaps12141;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 69235 70959 . + . ID=Thaps270139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGK7];external_name=Thaps270139;logic_name=jgi_thaps3 chr24 ensembl transcript 69235 70959 . + . ID=Thaps270139;Parent=Thaps270139;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 69235 69364 . + 0 ID=Thaps270139;Parent=Thaps270139;rank=1 chr24 . exon 69235 69364 . + . ID=Thaps270139.1;Parent=Thaps270139;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . CDS 69707 70137 . + 0 ID=Thaps270139;Parent=Thaps270139;rank=2 chr24 . CDS 70207 70520 . + 0 ID=Thaps270139;Parent=Thaps270139;rank=3 chr24 . CDS 70605 70959 . + 0 ID=Thaps270139;Parent=Thaps270139;rank=4 chr24 . repeat_region 79227 79272 . ? . description=trf chr24 ensembl protein_coding_gene 77615 78989 . - . ID=Thaps25890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGL0];external_name=Thaps25890;logic_name=jgi_thaps3 chr24 ensembl transcript 77615 78989 . - . ID=Thaps25890;Parent=Thaps25890;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 77615 78347 . - 0 ID=Thaps25890;Parent=Thaps25890;rank=2 chr24 . exon 77615 78347 . - . ID=Thaps25890.2;Parent=Thaps25890;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 78412 78989 . - 0 ID=Thaps25890;Parent=Thaps25890;rank=1 chr24 . exon 78412 78989 . - . ID=Thaps25890.1;Parent=Thaps25890;constitutive=1;ensembl_end_phase=2;rank=1 chr24 ensembl protein_coding_gene 75019 75677 . + . ID=Thaps264937;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGK9];external_name=Thaps264937;logic_name=jgi_thaps3 chr24 ensembl transcript 75019 75677 . + . ID=Thaps264937;Parent=Thaps264937;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 75019 75677 . + 0 ID=Thaps264937;Parent=Thaps264937;rank=1 chr24 . exon 75019 75677 . + . ID=Thaps264937.1;Parent=Thaps264937;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . exon 69707 70137 . + . ID=Thaps270139.2;Parent=Thaps270139;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . exon 70207 70520 . + . ID=Thaps270139.3;Parent=Thaps270139;constitutive=1;ensembl_end_phase=2;rank=3 chr24 . exon 70605 70959 . + . ID=Thaps270139.4;Parent=Thaps270139;constitutive=1;ensembl_end_phase=1;rank=4 chr24 ensembl protein_coding_gene 71866 73457 . + . ID=Thaps38890;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGK8];external_name=Thaps38890;logic_name=jgi_thaps3 chr24 ensembl transcript 71866 73457 . + . ID=Thaps38890;Parent=Thaps38890;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 71866 71943 . + 0 ID=Thaps38890;Parent=Thaps38890;rank=1 chr24 . exon 71866 71943 . + . ID=Thaps38890.1;Parent=Thaps38890;constitutive=1;rank=1 chr24 . CDS 72429 72571 . + 0 ID=Thaps38890;Parent=Thaps38890;rank=2 chr24 . exon 72429 72571 . + . ID=Thaps38890.2;Parent=Thaps38890;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 72809 73457 . + 0 ID=Thaps38890;Parent=Thaps38890;rank=3 chr24 . exon 72809 73457 . + . ID=Thaps38890.3;Parent=Thaps38890;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . repeat_region 87608 87704 . + . description=Gypsy1ALTR_TP chr24 . repeat_region 88901 89090 . + . description=Copia5LTR_TP chr24 ensembl protein_coding_gene 87790 88748 . + . ID=Thaps12147;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGL2];external_name=Thaps12147;logic_name=jgi_thaps3 chr24 ensembl transcript 87790 88748 . + . ID=Thaps12147;Parent=Thaps12147;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 87790 87942 . + 0 ID=Thaps12147;Parent=Thaps12147;rank=1 chr24 . exon 87790 87942 . + . ID=Thaps12147.1;Parent=Thaps12147;constitutive=1;rank=1 chr24 . CDS 88041 88055 . + 0 ID=Thaps12147;Parent=Thaps12147;rank=2 chr24 . exon 88041 88055 . + . ID=Thaps12147.2;Parent=Thaps12147;constitutive=1;rank=2 chr24 . CDS 88147 88185 . + 0 ID=Thaps12147;Parent=Thaps12147;rank=3 chr24 . exon 88147 88185 . + . ID=Thaps12147.3;Parent=Thaps12147;constitutive=1;rank=3 chr24 . CDS 88287 88313 . + 0 ID=Thaps12147;Parent=Thaps12147;rank=4 chr24 . exon 88287 88313 . + . ID=Thaps12147.4;Parent=Thaps12147;constitutive=1;rank=4 chr24 . CDS 88385 88446 . + 0 ID=Thaps12147;Parent=Thaps12147;rank=5 chr24 . exon 88385 88446 . + . ID=Thaps12147.5;Parent=Thaps12147;constitutive=1;ensembl_end_phase=2;rank=5 chr24 . CDS 88553 88579 . + 0 ID=Thaps12147;Parent=Thaps12147;rank=6 chr24 . exon 88553 88579 . + . ID=Thaps12147.6;Parent=Thaps12147;constitutive=1;rank=6 chr24 . CDS 88682 88748 . + 0 ID=Thaps12147;Parent=Thaps12147;rank=7 chr24 . exon 88682 88748 . + . ID=Thaps12147.7;Parent=Thaps12147;constitutive=1;ensembl_end_phase=1;rank=7 chr24 ensembl protein_coding_gene 81220 87171 . + . ID=Thaps25891;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGL1];external_name=Thaps25891;logic_name=jgi_thaps3 chr24 ensembl transcript 81220 87171 . + . ID=Thaps25891;Parent=Thaps25891;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 81220 84362 . + 0 ID=Thaps25891;Parent=Thaps25891;rank=1 chr24 . exon 81220 84362 . + . ID=Thaps25891.1;Parent=Thaps25891;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . CDS 84449 85515 . + 0 ID=Thaps25891;Parent=Thaps25891;rank=2 chr24 . exon 84449 85515 . + . ID=Thaps25891.2;Parent=Thaps25891;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 85587 85640 . + 0 ID=Thaps25891;Parent=Thaps25891;rank=3 chr24 . exon 85587 85640 . + . ID=Thaps25891.3;Parent=Thaps25891;constitutive=1;rank=3 chr24 . CDS 85769 87171 . + 0 ID=Thaps25891;Parent=Thaps25891;rank=4 chr24 . exon 85769 87171 . + . ID=Thaps25891.4;Parent=Thaps25891;constitutive=1;ensembl_end_phase=2;rank=4 chr24 . repeat_region 91356 91363 . ? . description=dust chr24 . repeat_region 91955 92020 . ? . description=dust chr24 . repeat_region 92001 92020 . ? . description=trf chr24 ensembl protein_coding_gene 93356 95731 . - . ID=Thaps12149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGL3];external_name=Thaps12149;logic_name=jgi_thaps3 chr24 ensembl transcript 93356 95731 . - . ID=Thaps12149;Parent=Thaps12149;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 93356 95731 . - 0 ID=Thaps12149;Parent=Thaps12149;rank=1 chr24 . exon 93356 95731 . - . ID=Thaps12149.1;Parent=Thaps12149;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 97886 99646 . - . ID=Thaps38909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGL5];external_name=Thaps38909;logic_name=jgi_thaps3 chr24 ensembl transcript 97886 99646 . - . ID=Thaps38909;Parent=Thaps38909;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 97886 98092 . - 0 ID=Thaps38909;Parent=Thaps38909;rank=3 chr24 . exon 97886 98092 . - . ID=Thaps38909.3;Parent=Thaps38909;constitutive=1;rank=3 chr24 . CDS 98147 99336 . - 0 ID=Thaps38909;Parent=Thaps38909;rank=2 chr24 . exon 98147 99336 . - . ID=Thaps38909.2;Parent=Thaps38909;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 99478 99646 . - 0 ID=Thaps38909;Parent=Thaps38909;rank=1 chr24 ensembl protein_coding_gene 97199 97693 . - . ID=Thaps38924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGL4];external_name=Thaps38924;logic_name=jgi_thaps3 chr24 ensembl transcript 97199 97693 . - . ID=Thaps38924;Parent=Thaps38924;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 97199 97693 . - 0 ID=Thaps38924;Parent=Thaps38924;rank=1 chr24 . exon 97199 97693 . - . ID=Thaps38924.1;Parent=Thaps38924;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 104867 106126 . + . ID=Thaps12152;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGL7];external_name=Thaps12152;logic_name=jgi_thaps3 chr24 ensembl transcript 104867 106126 . + . ID=Thaps12152;Parent=Thaps12152;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 104867 106126 . + 0 ID=Thaps12152;Parent=Thaps12152;rank=1 chr24 . exon 104867 106126 . + . ID=Thaps12152.1;Parent=Thaps12152;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 106609 109843 . + . ID=Thaps12153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGL8];external_name=Thaps12153;logic_name=jgi_thaps3 chr24 ensembl transcript 106609 109843 . + . ID=Thaps12153;Parent=Thaps12153;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 106609 107024 . + 0 ID=Thaps12153;Parent=Thaps12153;rank=1 chr24 . exon 106609 107024 . + . ID=Thaps12153.1;Parent=Thaps12153;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . CDS 107117 107840 . + 0 ID=Thaps12153;Parent=Thaps12153;rank=2 chr24 . exon 107117 107840 . + . ID=Thaps12153.2;Parent=Thaps12153;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 107947 108429 . + 0 ID=Thaps12153;Parent=Thaps12153;rank=3 chr24 . exon 107947 108429 . + . ID=Thaps12153.3;Parent=Thaps12153;constitutive=1;rank=3 chr24 . CDS 108513 108755 . + 0 ID=Thaps12153;Parent=Thaps12153;rank=4 chr24 . exon 108513 108755 . + . ID=Thaps12153.4;Parent=Thaps12153;constitutive=1;rank=4 chr24 . CDS 108842 109843 . + 0 ID=Thaps12153;Parent=Thaps12153;rank=5 chr24 . exon 108842 109843 . + . ID=Thaps12153.5;Parent=Thaps12153;constitutive=1;rank=5 chr24 ensembl protein_coding_gene 101385 103253 . - . ID=Thaps270141;biotype=protein_coding;description=3-oxoacyl-synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CGL6];external_name=KAS3;logic_name=jgi_thaps3 chr24 ensembl transcript 101385 103253 . - . ID=Thaps270141;Parent=Thaps270141;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 101385 101802 . - 0 ID=Thaps270141;Parent=Thaps270141;rank=5 chr24 . exon 101385 101802 . - . ID=Thaps270141.5;Parent=Thaps270141;constitutive=1;ensembl_end_phase=1;rank=5 chr24 . CDS 102087 102296 . - 0 ID=Thaps270141;Parent=Thaps270141;rank=4 chr24 . exon 102087 102296 . - . ID=Thaps270141.4;Parent=Thaps270141;constitutive=1;rank=4 chr24 . CDS 102492 102581 . - 0 ID=Thaps270141;Parent=Thaps270141;rank=3 chr24 . exon 102492 102581 . - . ID=Thaps270141.3;Parent=Thaps270141;constitutive=1;rank=3 chr24 . CDS 102760 102907 . - 0 ID=Thaps270141;Parent=Thaps270141;rank=2 chr24 . exon 102760 102907 . - . ID=Thaps270141.2;Parent=Thaps270141;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 102977 103253 . - 0 ID=Thaps270141;Parent=Thaps270141;rank=1 chr24 . exon 102977 103253 . - . ID=Thaps270141.1;Parent=Thaps270141;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . exon 99478 99646 . - . ID=Thaps38909.1;Parent=Thaps38909;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . repeat_region 111617 111630 . ? . description=dust chr24 . repeat_region 112059 112099 . ? . description=dust chr24 . repeat_region 112255 112262 . ? . description=dust chr24 . repeat_region 112883 112921 . ? . description=dust chr24 . repeat_region 112884 112921 . ? . description=trf chr24 . repeat_region 112890 112924 . ? . description=trf chr24 . repeat_region 118047 118123 . - . description=Gypsy1ALTR_TP chr24 . repeat_region 118381 118391 . ? . description=dust chr24 ensembl rRNA_gene 112920 113033 . - . ID=EPrTPOG00000000068;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr24 ensembl rRNA 112920 113033 . - . ID=EPrTPOT00000000068;Parent=EPrTPOG00000000068;biotype=rRNA;logic_name=ncrna_eg chr24 . exon 112920 113033 . - . ID=EPrTPOE00000000068;Parent=EPrTPOT00000000068;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 110397 112197 . - . ID=Thaps25892;biotype=protein_coding;description=Ferredoxin--NADP reductase [Source:UniProtKB/TrEMBL%3BAcc:B8CGL9];external_name=Thaps25892;logic_name=jgi_thaps3 chr24 ensembl transcript 110397 112197 . - . ID=Thaps25892;Parent=Thaps25892;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 110397 111342 . - 0 ID=Thaps25892;Parent=Thaps25892;rank=2 chr24 . exon 110397 111342 . - . ID=Thaps25892.2;Parent=Thaps25892;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 112124 112197 . - 0 ID=Thaps25892;Parent=Thaps25892;rank=1 chr24 . exon 112124 112197 . - . ID=Thaps25892.1;Parent=Thaps25892;constitutive=1;ensembl_end_phase=2;rank=1 chr24 ensembl protein_coding_gene 114729 116846 . - . ID=Thaps43150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGM0];external_name=Thaps43150;logic_name=jgi_thaps3 chr24 ensembl transcript 114729 116846 . - . ID=Thaps43150;Parent=Thaps43150;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 114729 114756 . - 0 ID=Thaps43150;Parent=Thaps43150;rank=4 chr24 . exon 114729 114756 . - . ID=Thaps43150.4;Parent=Thaps43150;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . CDS 114842 116073 . - 0 ID=Thaps43150;Parent=Thaps43150;rank=3 chr24 . exon 114842 116073 . - . ID=Thaps43150.3;Parent=Thaps43150;constitutive=1;ensembl_end_phase=2;rank=3 chr24 . CDS 116201 116352 . - 0 ID=Thaps43150;Parent=Thaps43150;rank=2 chr24 . exon 116201 116352 . - . ID=Thaps43150.2;Parent=Thaps43150;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 116489 116846 . - 0 ID=Thaps43150;Parent=Thaps43150;rank=1 chr24 . exon 116489 116846 . - . ID=Thaps43150.1;Parent=Thaps43150;constitutive=1;ensembl_end_phase=1;rank=1 chr24 ensembl protein_coding_gene 122031 124105 . + . ID=Thaps16184;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGM3];external_name=Thaps16184;logic_name=jgi_thaps3 chr24 ensembl transcript 122031 124105 . + . ID=Thaps16184;Parent=Thaps16184;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 122031 122111 . + 0 ID=Thaps16184;Parent=Thaps16184;rank=1 chr24 . exon 122031 122111 . + . ID=Thaps16184.1;Parent=Thaps16184;constitutive=1;rank=1 chr24 . CDS 122215 122308 . + 0 ID=Thaps16184;Parent=Thaps16184;rank=2 chr24 . exon 122215 122308 . + . ID=Thaps16184.2;Parent=Thaps16184;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 122853 123047 . + 0 ID=Thaps16184;Parent=Thaps16184;rank=3 chr24 . exon 122853 123047 . + . ID=Thaps16184.3;Parent=Thaps16184;constitutive=1;rank=3 chr24 . CDS 123219 123334 . + 0 ID=Thaps16184;Parent=Thaps16184;rank=4 chr24 . exon 123219 123334 . + . ID=Thaps16184.4;Parent=Thaps16184;constitutive=1;ensembl_end_phase=2;rank=4 chr24 . CDS 123395 123485 . + 0 ID=Thaps16184;Parent=Thaps16184;rank=5 chr24 . exon 123395 123485 . + . ID=Thaps16184.5;Parent=Thaps16184;constitutive=1;ensembl_end_phase=1;rank=5 chr24 . CDS 123543 123685 . + 0 ID=Thaps16184;Parent=Thaps16184;rank=6 chr24 . exon 123543 123685 . + . ID=Thaps16184.6;Parent=Thaps16184;constitutive=1;ensembl_end_phase=2;rank=6 chr24 . CDS 123962 124105 . + 0 ID=Thaps16184;Parent=Thaps16184;rank=7 chr24 . exon 123962 124105 . + . ID=Thaps16184.7;Parent=Thaps16184;constitutive=1;rank=7 chr24 ensembl protein_coding_gene 120568 120960 . - . ID=Thaps25895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGM2];external_name=Thaps25895;logic_name=jgi_thaps3 chr24 ensembl transcript 120568 120960 . - . ID=Thaps25895;Parent=Thaps25895;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 120568 120960 . - 0 ID=Thaps25895;Parent=Thaps25895;rank=1 chr24 . exon 120568 120960 . - . ID=Thaps25895.1;Parent=Thaps25895;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 125874 131146 . - . ID=Thaps25897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGM4];external_name=Thaps25897;logic_name=jgi_thaps3 chr24 ensembl transcript 125874 131146 . - . ID=Thaps25897;Parent=Thaps25897;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 125874 127012 . - 0 ID=Thaps25897;Parent=Thaps25897;rank=4 chr24 . exon 125874 127012 . - . ID=Thaps25897.4;Parent=Thaps25897;constitutive=1;ensembl_end_phase=2;rank=4 chr24 . CDS 127043 127963 . - 0 ID=Thaps25897;Parent=Thaps25897;rank=3 chr24 . exon 127043 127963 . - . ID=Thaps25897.3;Parent=Thaps25897;constitutive=1;rank=3 chr24 . CDS 128063 129967 . - 0 ID=Thaps25897;Parent=Thaps25897;rank=2 chr24 . exon 128063 129967 . - . ID=Thaps25897.2;Parent=Thaps25897;constitutive=1;rank=2 chr24 . CDS 130048 131146 . - 0 ID=Thaps25897;Parent=Thaps25897;rank=1 chr24 ensembl protein_coding_gene 119712 120308 . + . ID=Thaps866;biotype=protein_coding;description=ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CGM1];external_name=Thaps866;logic_name=jgi_thaps3 chr24 ensembl transcript 119712 120308 . + . ID=Thaps866;Parent=Thaps866;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 119712 120308 . + 0 ID=Thaps866;Parent=Thaps866;rank=1 chr24 . exon 119712 120308 . + . ID=Thaps866.1;Parent=Thaps866;constitutive=1;rank=1 chr24 . repeat_region 135885 135918 . ? . description=trf chr24 ensembl protein_coding_gene 132723 133220 . + . ID=Thaps12160;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGM5];external_name=Thaps12160;logic_name=jgi_thaps3 chr24 ensembl transcript 132723 133220 . + . ID=Thaps12160;Parent=Thaps12160;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 132723 133220 . + 0 ID=Thaps12160;Parent=Thaps12160;rank=1 chr24 . exon 132723 133220 . + . ID=Thaps12160.1;Parent=Thaps12160;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 133436 134050 . - . ID=Thaps12161;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGM6];external_name=Thaps12161;logic_name=jgi_thaps3 chr24 ensembl transcript 133436 134050 . - . ID=Thaps12161;Parent=Thaps12161;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 133436 134050 . - 0 ID=Thaps12161;Parent=Thaps12161;rank=1 chr24 . exon 133436 134050 . - . ID=Thaps12161.1;Parent=Thaps12161;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 134718 136049 . + . ID=Thaps12162;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGM7];external_name=Thaps12162;logic_name=jgi_thaps3 chr24 ensembl transcript 134718 136049 . + . ID=Thaps12162;Parent=Thaps12162;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 134718 135013 . + 0 ID=Thaps12162;Parent=Thaps12162;rank=1 chr24 . exon 134718 135013 . + . ID=Thaps12162.1;Parent=Thaps12162;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . CDS 135098 136049 . + 0 ID=Thaps12162;Parent=Thaps12162;rank=2 chr24 . exon 135098 136049 . + . ID=Thaps12162.2;Parent=Thaps12162;constitutive=1;ensembl_end_phase=1;rank=2 chr24 ensembl protein_coding_gene 136314 140303 . - . ID=Thaps12163;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGM8];external_name=Thaps12163;logic_name=jgi_thaps3 chr24 ensembl transcript 136314 140303 . - . ID=Thaps12163;Parent=Thaps12163;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 136314 138587 . - 0 ID=Thaps12163;Parent=Thaps12163;rank=4 chr24 . exon 136314 138587 . - . ID=Thaps12163.4;Parent=Thaps12163;constitutive=1;rank=4 chr24 . CDS 138671 138936 . - 0 ID=Thaps12163;Parent=Thaps12163;rank=3 chr24 . exon 138671 138936 . - . ID=Thaps12163.3;Parent=Thaps12163;constitutive=1;ensembl_end_phase=2;rank=3 chr24 . CDS 139010 139302 . - 0 ID=Thaps12163;Parent=Thaps12163;rank=2 chr24 . CDS 139669 140303 . - 0 ID=Thaps12163;Parent=Thaps12163;rank=1 chr24 . exon 130048 131146 . - . ID=Thaps25897.1;Parent=Thaps25897;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . repeat_region 140409 140436 . ? . description=dust chr24 . exon 139010 139302 . - . ID=Thaps12163.2;Parent=Thaps12163;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . exon 139669 140303 . - . ID=Thaps12163.1;Parent=Thaps12163;constitutive=1;ensembl_end_phase=2;rank=1 chr24 ensembl protein_coding_gene 140593 141573 . - . ID=Thaps12164;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGM9];external_name=Thaps12164;logic_name=jgi_thaps3 chr24 ensembl transcript 140593 141573 . - . ID=Thaps12164;Parent=Thaps12164;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 140593 141573 . - 0 ID=Thaps12164;Parent=Thaps12164;rank=1 chr24 . exon 140593 141573 . - . ID=Thaps12164.1;Parent=Thaps12164;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 145338 145826 . - . ID=Thaps12166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGN1];external_name=Thaps12166;logic_name=jgi_thaps3 chr24 ensembl transcript 145338 145826 . - . ID=Thaps12166;Parent=Thaps12166;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 145338 145826 . - 0 ID=Thaps12166;Parent=Thaps12166;rank=1 chr24 . exon 145338 145826 . - . ID=Thaps12166.1;Parent=Thaps12166;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 142840 144981 . - . ID=Thaps25898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGN0];external_name=Thaps25898;logic_name=jgi_thaps3 chr24 ensembl transcript 142840 144981 . - . ID=Thaps25898;Parent=Thaps25898;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 142840 143129 . - 0 ID=Thaps25898;Parent=Thaps25898;rank=5 chr24 . exon 142840 143129 . - . ID=Thaps25898.5;Parent=Thaps25898;constitutive=1;ensembl_end_phase=2;rank=5 chr24 . CDS 143223 143379 . - 0 ID=Thaps25898;Parent=Thaps25898;rank=4 chr24 . exon 143223 143379 . - . ID=Thaps25898.4;Parent=Thaps25898;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . CDS 143486 143823 . - 0 ID=Thaps25898;Parent=Thaps25898;rank=3 chr24 . exon 143486 143823 . - . ID=Thaps25898.3;Parent=Thaps25898;constitutive=1;ensembl_end_phase=2;rank=3 chr24 . CDS 143985 144201 . - 0 ID=Thaps25898;Parent=Thaps25898;rank=2 chr24 . exon 143985 144201 . - . ID=Thaps25898.2;Parent=Thaps25898;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 144643 144981 . - 0 ID=Thaps25898;Parent=Thaps25898;rank=1 chr24 . exon 144643 144981 . - . ID=Thaps25898.1;Parent=Thaps25898;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 147749 148525 . - . ID=Thaps25899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGN2];external_name=Thaps25899;logic_name=jgi_thaps3 chr24 ensembl transcript 147749 148525 . - . ID=Thaps25899;Parent=Thaps25899;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 147749 148525 . - 0 ID=Thaps25899;Parent=Thaps25899;rank=1 chr24 . exon 147749 148525 . - . ID=Thaps25899.1;Parent=Thaps25899;constitutive=1;rank=1 chr24 . repeat_region 152508 152574 . ? . description=trf chr24 . repeat_region 152642 152689 . ? . description=trf chr24 ensembl protein_coding_gene 151789 152842 . + . ID=Thaps12168;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGN3];external_name=CINY1;logic_name=jgi_thaps3 chr24 ensembl transcript 151789 152842 . + . ID=Thaps12168;Parent=Thaps12168;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 151789 152047 . + 0 ID=Thaps12168;Parent=Thaps12168;rank=1 chr24 . exon 151789 152047 . + . ID=Thaps12168.1;Parent=Thaps12168;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . CDS 152157 152378 . + 0 ID=Thaps12168;Parent=Thaps12168;rank=2 chr24 . exon 152157 152378 . + . ID=Thaps12168.2;Parent=Thaps12168;constitutive=1;rank=2 chr24 . CDS 152481 152842 . + 0 ID=Thaps12168;Parent=Thaps12168;rank=3 chr24 . exon 152481 152842 . + . ID=Thaps12168.3;Parent=Thaps12168;constitutive=1;ensembl_end_phase=2;rank=3 chr24 ensembl protein_coding_gene 158167 158768 . + . ID=Thaps12171;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGN6];external_name=Thaps12171;logic_name=jgi_thaps3 chr24 ensembl transcript 158167 158768 . + . ID=Thaps12171;Parent=Thaps12171;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 158167 158271 . + 0 ID=Thaps12171;Parent=Thaps12171;rank=1 chr24 . exon 158167 158271 . + . ID=Thaps12171.1;Parent=Thaps12171;constitutive=1;rank=1 chr24 . CDS 158463 158768 . + 0 ID=Thaps12171;Parent=Thaps12171;rank=2 chr24 . exon 158463 158768 . + . ID=Thaps12171.2;Parent=Thaps12171;constitutive=1;rank=2 chr24 ensembl protein_coding_gene 156773 157827 . - . ID=Thaps25901;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGN5];external_name=Thaps25901;logic_name=jgi_thaps3 chr24 ensembl transcript 156773 157827 . - . ID=Thaps25901;Parent=Thaps25901;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 156773 156811 . - 0 ID=Thaps25901;Parent=Thaps25901;rank=2 chr24 . exon 156773 156811 . - . ID=Thaps25901.2;Parent=Thaps25901;constitutive=1;rank=2 chr24 . CDS 156835 157827 . - 0 ID=Thaps25901;Parent=Thaps25901;rank=1 chr24 . exon 156835 157827 . - . ID=Thaps25901.1;Parent=Thaps25901;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 154122 156349 . + . ID=Thaps270145;biotype=protein_coding;description=L-aspartate oxidase [Source:UniProtKB/TrEMBL%3BAcc:B8CGN4];external_name=LASPO;logic_name=jgi_thaps3 chr24 ensembl transcript 154122 156349 . + . ID=Thaps270145;Parent=Thaps270145;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 154122 154395 . + 0 ID=Thaps270145;Parent=Thaps270145;rank=1 chr24 . exon 154122 154395 . + . ID=Thaps270145.1;Parent=Thaps270145;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . CDS 154444 154539 . + 0 ID=Thaps270145;Parent=Thaps270145;rank=2 chr24 . exon 154444 154539 . + . ID=Thaps270145.2;Parent=Thaps270145;constitutive=1;rank=2 chr24 . CDS 154881 155316 . + 0 ID=Thaps270145;Parent=Thaps270145;rank=3 chr24 . exon 154881 155316 . + . ID=Thaps270145.3;Parent=Thaps270145;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 155362 155947 . + 0 ID=Thaps270145;Parent=Thaps270145;rank=4 chr24 . exon 155362 155947 . + . ID=Thaps270145.4;Parent=Thaps270145;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . CDS 156032 156349 . + 0 ID=Thaps270145;Parent=Thaps270145;rank=5 chr24 . exon 156032 156349 . + . ID=Thaps270145.5;Parent=Thaps270145;constitutive=1;rank=5 chr24 ensembl protein_coding_gene 159430 160529 . - . ID=Thaps12172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGN7];external_name=Thaps12172;logic_name=jgi_thaps3 chr24 ensembl transcript 159430 160529 . - . ID=Thaps12172;Parent=Thaps12172;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 159430 160117 . - 0 ID=Thaps12172;Parent=Thaps12172;rank=2 chr24 . exon 159430 160117 . - . ID=Thaps12172.2;Parent=Thaps12172;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 160195 160529 . - 0 ID=Thaps12172;Parent=Thaps12172;rank=1 chr24 . exon 160195 160529 . - . ID=Thaps12172.1;Parent=Thaps12172;constitutive=1;ensembl_end_phase=2;rank=1 chr24 ensembl protein_coding_gene 163092 164376 . + . ID=Thaps264946;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGN8];external_name=Thaps264946;logic_name=jgi_thaps3 chr24 ensembl transcript 163092 164376 . + . ID=Thaps264946;Parent=Thaps264946;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 163092 163241 . + 0 ID=Thaps264946;Parent=Thaps264946;rank=1 chr24 . exon 163092 163241 . + . ID=Thaps264946.1;Parent=Thaps264946;constitutive=1;rank=1 chr24 . CDS 163305 163622 . + 0 ID=Thaps264946;Parent=Thaps264946;rank=2 chr24 . exon 163305 163622 . + . ID=Thaps264946.2;Parent=Thaps264946;constitutive=1;rank=2 chr24 . CDS 163713 163934 . + 0 ID=Thaps264946;Parent=Thaps264946;rank=3 chr24 . exon 163713 163934 . + . ID=Thaps264946.3;Parent=Thaps264946;constitutive=1;rank=3 chr24 . CDS 164031 164376 . + 0 ID=Thaps264946;Parent=Thaps264946;rank=4 chr24 . exon 164031 164376 . + . ID=Thaps264946.4;Parent=Thaps264946;constitutive=1;ensembl_end_phase=1;rank=4 chr24 ensembl protein_coding_gene 166190 168391 . + . ID=Thaps270148;biotype=protein_coding;description=Heat shock protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGN9];external_name=Thaps270148;logic_name=jgi_thaps3 chr24 ensembl transcript 166190 168391 . + . ID=Thaps270148;Parent=Thaps270148;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 166190 166433 . + 0 ID=Thaps270148;Parent=Thaps270148;rank=1 chr24 . exon 166190 166433 . + . ID=Thaps270148.1;Parent=Thaps270148;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . CDS 166626 166883 . + 0 ID=Thaps270148;Parent=Thaps270148;rank=2 chr24 . exon 166626 166883 . + . ID=Thaps270148.2;Parent=Thaps270148;constitutive=1;rank=2 chr24 . CDS 166929 167366 . + 0 ID=Thaps270148;Parent=Thaps270148;rank=3 chr24 . exon 166929 167366 . + . ID=Thaps270148.3;Parent=Thaps270148;constitutive=1;rank=3 chr24 . CDS 167478 167869 . + 0 ID=Thaps270148;Parent=Thaps270148;rank=4 chr24 . exon 167478 167869 . + . ID=Thaps270148.4;Parent=Thaps270148;constitutive=1;ensembl_end_phase=2;rank=4 chr24 . CDS 167945 168391 . + 0 ID=Thaps270148;Parent=Thaps270148;rank=5 chr24 . exon 167945 168391 . + . ID=Thaps270148.5;Parent=Thaps270148;constitutive=1;rank=5 chr24 . repeat_region 170250 170576 . + . description=TE2_TP chr24 . repeat_region 170574 170895 . + . description=TE2b_TP chr24 . repeat_region 170665 170707 . ? . description=trf chr24 . repeat_region 170671 170711 . ? . description=trf chr24 . repeat_region 170795 170911 . - . description=TE2b_TP chr24 . repeat_region 175885 176059 . - . description=TE2c_TP chr24 . repeat_region 177242 177442 . + . description=Harbinger4_TP chr24 . repeat_region 177718 177744 . ? . description=trf chr24 ensembl protein_coding_gene 172063 172653 . + . ID=Thaps25904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP0];external_name=Thaps25904;logic_name=jgi_thaps3 chr24 ensembl transcript 172063 172653 . + . ID=Thaps25904;Parent=Thaps25904;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 172063 172653 . + 0 ID=Thaps25904;Parent=Thaps25904;rank=1 chr24 . exon 172063 172653 . + . ID=Thaps25904.1;Parent=Thaps25904;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 174561 175679 . - . ID=Thaps25905;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP1];external_name=Thaps25905;logic_name=jgi_thaps3 chr24 ensembl transcript 174561 175679 . - . ID=Thaps25905;Parent=Thaps25905;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 174561 175679 . - 0 ID=Thaps25905;Parent=Thaps25905;rank=1 chr24 . exon 174561 175679 . - . ID=Thaps25905.1;Parent=Thaps25905;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 177777 179168 . + . ID=Thaps25906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP2];external_name=Thaps25906;logic_name=jgi_thaps3 chr24 ensembl transcript 177777 179168 . + . ID=Thaps25906;Parent=Thaps25906;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 177777 179168 . + 0 ID=Thaps25906;Parent=Thaps25906;rank=1 chr24 . exon 177777 179168 . + . ID=Thaps25906.1;Parent=Thaps25906;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 182553 183846 . - . ID=Thaps12179;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP4];external_name=Thaps12179;logic_name=jgi_thaps3 chr24 ensembl transcript 182553 183846 . - . ID=Thaps12179;Parent=Thaps12179;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 182553 182602 . - 0 ID=Thaps12179;Parent=Thaps12179;rank=6 chr24 . exon 182553 182602 . - . ID=Thaps12179.6;Parent=Thaps12179;constitutive=1;ensembl_end_phase=2;rank=6 chr24 . CDS 182797 182829 . - 0 ID=Thaps12179;Parent=Thaps12179;rank=5 chr24 . exon 182797 182829 . - . ID=Thaps12179.5;Parent=Thaps12179;constitutive=1;rank=5 chr24 . CDS 182929 182962 . - 0 ID=Thaps12179;Parent=Thaps12179;rank=4 chr24 . exon 182929 182962 . - . ID=Thaps12179.4;Parent=Thaps12179;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . CDS 183066 183611 . - 0 ID=Thaps12179;Parent=Thaps12179;rank=3 chr24 . exon 183066 183611 . - . ID=Thaps12179.3;Parent=Thaps12179;constitutive=1;rank=3 chr24 . CDS 183689 183720 . - 0 ID=Thaps12179;Parent=Thaps12179;rank=2 chr24 . exon 183689 183720 . - . ID=Thaps12179.2;Parent=Thaps12179;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 183798 183846 . - 0 ID=Thaps12179;Parent=Thaps12179;rank=1 chr24 . exon 183798 183846 . - . ID=Thaps12179.1;Parent=Thaps12179;constitutive=1;ensembl_end_phase=1;rank=1 chr24 ensembl protein_coding_gene 184303 185094 . - . ID=Thaps12180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP5];external_name=Thaps12180;logic_name=jgi_thaps3 chr24 ensembl transcript 184303 185094 . - . ID=Thaps12180;Parent=Thaps12180;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 184303 184842 . - 0 ID=Thaps12180;Parent=Thaps12180;rank=3 chr24 . exon 184303 184842 . - . ID=Thaps12180.3;Parent=Thaps12180;constitutive=1;rank=3 chr24 . CDS 184924 184955 . - 0 ID=Thaps12180;Parent=Thaps12180;rank=2 chr24 . exon 184924 184955 . - . ID=Thaps12180.2;Parent=Thaps12180;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 185043 185094 . - 0 ID=Thaps12180;Parent=Thaps12180;rank=1 chr24 . exon 185043 185094 . - . ID=Thaps12180.1;Parent=Thaps12180;constitutive=1;ensembl_end_phase=1;rank=1 chr24 ensembl protein_coding_gene 187371 188476 . - . ID=Thaps25908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP6];external_name=Thaps25908;logic_name=jgi_thaps3 chr24 ensembl transcript 187371 188476 . - . ID=Thaps25908;Parent=Thaps25908;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 187371 187746 . - 0 ID=Thaps25908;Parent=Thaps25908;rank=4 chr24 . exon 187371 187746 . - . ID=Thaps25908.4;Parent=Thaps25908;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . CDS 187837 187969 . - 0 ID=Thaps25908;Parent=Thaps25908;rank=3 chr24 . exon 187837 187969 . - . ID=Thaps25908.3;Parent=Thaps25908;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 188071 188337 . - 0 ID=Thaps25908;Parent=Thaps25908;rank=2 chr24 . exon 188071 188337 . - . ID=Thaps25908.2;Parent=Thaps25908;constitutive=1;rank=2 chr24 . CDS 188428 188476 . - 0 ID=Thaps25908;Parent=Thaps25908;rank=1 chr24 ensembl protein_coding_gene 180393 181235 . - . ID=Thaps38907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP3];external_name=Thaps38907;logic_name=jgi_thaps3 chr24 ensembl transcript 180393 181235 . - . ID=Thaps38907;Parent=Thaps38907;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 180393 180577 . - 0 ID=Thaps38907;Parent=Thaps38907;rank=3 chr24 . exon 180393 180577 . - . ID=Thaps38907.3;Parent=Thaps38907;constitutive=1;ensembl_end_phase=2;rank=3 chr24 . CDS 180764 180925 . - 0 ID=Thaps38907;Parent=Thaps38907;rank=2 chr24 . exon 180764 180925 . - . ID=Thaps38907.2;Parent=Thaps38907;constitutive=1;rank=2 chr24 . CDS 181082 181235 . - 0 ID=Thaps38907;Parent=Thaps38907;rank=1 chr24 . exon 181082 181235 . - . ID=Thaps38907.1;Parent=Thaps38907;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . repeat_region 189528 189579 . ? . description=trf chr24 . repeat_region 193381 193426 . ? . description=trf chr24 . repeat_region 197706 197723 . ? . description=dust chr24 ensembl protein_coding_gene 189169 191177 . - . ID=Thaps12182;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP7];external_name=Thaps12182;logic_name=jgi_thaps3 chr24 ensembl transcript 189169 191177 . - . ID=Thaps12182;Parent=Thaps12182;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 189169 189883 . - 0 ID=Thaps12182;Parent=Thaps12182;rank=3 chr24 . exon 189169 189883 . - . ID=Thaps12182.3;Parent=Thaps12182;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 189972 190712 . - 0 ID=Thaps12182;Parent=Thaps12182;rank=2 chr24 . exon 189972 190712 . - . ID=Thaps12182.2;Parent=Thaps12182;constitutive=1;rank=2 chr24 . CDS 190750 191177 . - 0 ID=Thaps12182;Parent=Thaps12182;rank=1 chr24 . exon 190750 191177 . - . ID=Thaps12182.1;Parent=Thaps12182;constitutive=1;ensembl_end_phase=2;rank=1 chr24 ensembl protein_coding_gene 191977 193685 . + . ID=Thaps12183;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP8];external_name=Thaps12183;logic_name=jgi_thaps3 chr24 ensembl transcript 191977 193685 . + . ID=Thaps12183;Parent=Thaps12183;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 191977 192041 . + 0 ID=Thaps12183;Parent=Thaps12183;rank=1 chr24 . exon 191977 192041 . + . ID=Thaps12183.1;Parent=Thaps12183;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . CDS 192415 193234 . + 0 ID=Thaps12183;Parent=Thaps12183;rank=2 chr24 . exon 192415 193234 . + . ID=Thaps12183.2;Parent=Thaps12183;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 193323 193685 . + 0 ID=Thaps12183;Parent=Thaps12183;rank=3 chr24 . exon 193323 193685 . + . ID=Thaps12183.3;Parent=Thaps12183;constitutive=1;rank=3 chr24 ensembl protein_coding_gene 196660 197088 . - . ID=Thaps12185;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ0];external_name=Thaps12185;logic_name=jgi_thaps3 chr24 ensembl transcript 196660 197088 . - . ID=Thaps12185;Parent=Thaps12185;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 196660 197088 . - 0 ID=Thaps12185;Parent=Thaps12185;rank=1 chr24 . exon 196660 197088 . - . ID=Thaps12185.1;Parent=Thaps12185;constitutive=1;rank=1 chr24 . exon 188428 188476 . - . ID=Thaps25908.1;Parent=Thaps25908;constitutive=1;ensembl_end_phase=1;rank=1 chr24 ensembl protein_coding_gene 194455 195713 . - . ID=Thaps25909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGP9];external_name=Thaps25909;logic_name=jgi_thaps3 chr24 ensembl transcript 194455 195713 . - . ID=Thaps25909;Parent=Thaps25909;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 194455 195594 . - 0 ID=Thaps25909;Parent=Thaps25909;rank=2 chr24 . exon 194455 195594 . - . ID=Thaps25909.2;Parent=Thaps25909;constitutive=1;rank=2 chr24 . CDS 195675 195713 . - 0 ID=Thaps25909;Parent=Thaps25909;rank=1 chr24 . exon 195675 195713 . - . ID=Thaps25909.1;Parent=Thaps25909;constitutive=1;rank=1 chr24 . repeat_region 201121 204570 . - . description=Harbinger2_TP chr24 ensembl rRNA_gene 206826 206939 . - . ID=EPrTPOG00000000046;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr24 ensembl rRNA 206826 206939 . - . ID=EPrTPOT00000000046;Parent=EPrTPOG00000000046;biotype=rRNA;logic_name=ncrna_eg chr24 . exon 206826 206939 . - . ID=EPrTPOE00000000046;Parent=EPrTPOT00000000046;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 199922 200350 . + . ID=Thaps12186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ1];external_name=Thaps12186;logic_name=jgi_thaps3 chr24 ensembl transcript 199922 200350 . + . ID=Thaps12186;Parent=Thaps12186;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 199922 200350 . + 0 ID=Thaps12186;Parent=Thaps12186;rank=1 chr24 . exon 199922 200350 . + . ID=Thaps12186.1;Parent=Thaps12186;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 206053 208888 . - . ID=Thaps12187;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ2];external_name=Thaps12187;logic_name=jgi_thaps3 chr24 ensembl transcript 206053 208888 . - . ID=Thaps12187;Parent=Thaps12187;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 206053 206128 . - 0 ID=Thaps12187;Parent=Thaps12187;rank=8 chr24 . exon 206053 206128 . - . ID=Thaps12187.8;Parent=Thaps12187;constitutive=1;ensembl_end_phase=1;rank=8 chr24 . CDS 206331 206423 . - 0 ID=Thaps12187;Parent=Thaps12187;rank=7 chr24 . exon 206331 206423 . - . ID=Thaps12187.7;Parent=Thaps12187;constitutive=1;rank=7 chr24 . CDS 206694 206749 . - 0 ID=Thaps12187;Parent=Thaps12187;rank=6 chr24 . exon 206694 206749 . - . ID=Thaps12187.6;Parent=Thaps12187;constitutive=1;ensembl_end_phase=2;rank=6 chr24 . CDS 206789 206941 . - 0 ID=Thaps12187;Parent=Thaps12187;rank=5 chr24 . exon 206789 206941 . - . ID=Thaps12187.5;Parent=Thaps12187;constitutive=1;rank=5 chr24 . CDS 207089 207132 . - 0 ID=Thaps12187;Parent=Thaps12187;rank=4 chr24 . exon 207089 207132 . - . ID=Thaps12187.4;Parent=Thaps12187;constitutive=1;ensembl_end_phase=2;rank=4 chr24 . CDS 207229 207891 . - 0 ID=Thaps12187;Parent=Thaps12187;rank=3 chr24 . exon 207229 207891 . - . ID=Thaps12187.3;Parent=Thaps12187;constitutive=1;rank=3 chr24 . CDS 207964 208626 . - 0 ID=Thaps12187;Parent=Thaps12187;rank=2 chr24 . exon 207964 208626 . - . ID=Thaps12187.2;Parent=Thaps12187;constitutive=1;rank=2 chr24 . CDS 208702 208888 . - 0 ID=Thaps12187;Parent=Thaps12187;rank=1 chr24 . repeat_region 210315 210360 . ? . description=trf chr24 . repeat_region 215294 215357 . ? . description=trf chr24 . repeat_region 215299 215375 . ? . description=trf chr24 . exon 208702 208888 . - . ID=Thaps12187.1;Parent=Thaps12187;constitutive=1;ensembl_end_phase=1;rank=1 chr24 ensembl protein_coding_gene 209794 216202 . - . ID=Thaps12188;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ3];external_name=Thaps12188;logic_name=jgi_thaps3 chr24 ensembl transcript 209794 216202 . - . ID=Thaps12188;Parent=Thaps12188;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 209794 209967 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=16 chr24 . exon 209794 209967 . - . ID=Thaps12188.16;Parent=Thaps12188;constitutive=1;rank=16 chr24 . CDS 210044 210219 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=15 chr24 . exon 210044 210219 . - . ID=Thaps12188.15;Parent=Thaps12188;constitutive=1;ensembl_end_phase=2;rank=15 chr24 . CDS 210937 211003 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=14 chr24 . exon 210937 211003 . - . ID=Thaps12188.14;Parent=Thaps12188;constitutive=1;ensembl_end_phase=1;rank=14 chr24 . CDS 211092 211372 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=13 chr24 . exon 211092 211372 . - . ID=Thaps12188.13;Parent=Thaps12188;constitutive=1;ensembl_end_phase=2;rank=13 chr24 . CDS 211468 211991 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=12 chr24 . exon 211468 211991 . - . ID=Thaps12188.12;Parent=Thaps12188;constitutive=1;ensembl_end_phase=2;rank=12 chr24 . CDS 212066 212137 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=11 chr24 . exon 212066 212137 . - . ID=Thaps12188.11;Parent=Thaps12188;constitutive=1;rank=11 chr24 . CDS 212208 212384 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=10 chr24 . exon 212208 212384 . - . ID=Thaps12188.10;Parent=Thaps12188;constitutive=1;rank=10 chr24 . CDS 212463 212531 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=9 chr24 . exon 212463 212531 . - . ID=Thaps12188.9;Parent=Thaps12188;constitutive=1;rank=9 chr24 . CDS 212621 212656 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=8 chr24 . exon 212621 212656 . - . ID=Thaps12188.8;Parent=Thaps12188;constitutive=1;rank=8 chr24 . CDS 212745 212789 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=7 chr24 . exon 212745 212789 . - . ID=Thaps12188.7;Parent=Thaps12188;constitutive=1;rank=7 chr24 . CDS 212875 212970 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=6 chr24 . exon 212875 212970 . - . ID=Thaps12188.6;Parent=Thaps12188;constitutive=1;rank=6 chr24 . CDS 213108 213146 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=5 chr24 . exon 213108 213146 . - . ID=Thaps12188.5;Parent=Thaps12188;constitutive=1;rank=5 chr24 . CDS 213415 214471 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=4 chr24 . exon 213415 214471 . - . ID=Thaps12188.4;Parent=Thaps12188;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . CDS 214598 214826 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=3 chr24 . exon 214598 214826 . - . ID=Thaps12188.3;Parent=Thaps12188;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 214964 215952 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=2 chr24 . exon 214964 215952 . - . ID=Thaps12188.2;Parent=Thaps12188;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 216064 216202 . - 0 ID=Thaps12188;Parent=Thaps12188;rank=1 chr24 . exon 216064 216202 . - . ID=Thaps12188.1;Parent=Thaps12188;constitutive=1;ensembl_end_phase=1;rank=1 chr24 ensembl protein_coding_gene 217352 218881 . + . ID=Thaps12189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ4];external_name=Thaps12189;logic_name=jgi_thaps3 chr24 ensembl transcript 217352 218881 . + . ID=Thaps12189;Parent=Thaps12189;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 217352 217786 . + 0 ID=Thaps12189;Parent=Thaps12189;rank=1 chr24 . exon 217352 217786 . + . ID=Thaps12189.1;Parent=Thaps12189;constitutive=1;rank=1 chr24 . CDS 217961 218881 . + 0 ID=Thaps12189;Parent=Thaps12189;rank=2 chr24 . exon 217961 218881 . + . ID=Thaps12189.2;Parent=Thaps12189;constitutive=1;rank=2 chr24 . repeat_region 220511 220518 . ? . description=dust chr24 . repeat_region 222418 222437 . ? . description=dust chr24 . repeat_region 223214 223273 . ? . description=dust chr24 . repeat_region 223611 223673 . ? . description=dust chr24 ensembl protein_coding_gene 221816 225832 . + . ID=Thaps12191;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ6];external_name=Thaps12191;logic_name=jgi_thaps3 chr24 ensembl transcript 221816 225832 . + . ID=Thaps12191;Parent=Thaps12191;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 221816 222312 . + 0 ID=Thaps12191;Parent=Thaps12191;rank=1 chr24 . exon 221816 222312 . + . ID=Thaps12191.1;Parent=Thaps12191;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . CDS 222393 222507 . + 0 ID=Thaps12191;Parent=Thaps12191;rank=2 chr24 . exon 222393 222507 . + . ID=Thaps12191.2;Parent=Thaps12191;constitutive=1;ensembl_end_phase=1;rank=2 chr24 . CDS 222709 223720 . + 0 ID=Thaps12191;Parent=Thaps12191;rank=3 chr24 . exon 222709 223720 . + . ID=Thaps12191.3;Parent=Thaps12191;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 223839 225832 . + 0 ID=Thaps12191;Parent=Thaps12191;rank=4 chr24 . exon 223839 225832 . + . ID=Thaps12191.4;Parent=Thaps12191;constitutive=1;ensembl_end_phase=2;rank=4 chr24 ensembl protein_coding_gene 226659 228169 . - . ID=Thaps12192;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ7];external_name=Thaps12192;logic_name=jgi_thaps3 chr24 ensembl transcript 226659 228169 . - . ID=Thaps12192;Parent=Thaps12192;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 226659 227024 . - 0 ID=Thaps12192;Parent=Thaps12192;rank=8 chr24 . exon 226659 227024 . - . ID=Thaps12192.8;Parent=Thaps12192;constitutive=1;rank=8 chr24 . CDS 227126 227185 . - 0 ID=Thaps12192;Parent=Thaps12192;rank=7 chr24 . exon 227126 227185 . - . ID=Thaps12192.7;Parent=Thaps12192;constitutive=1;rank=7 chr24 . CDS 227261 227287 . - 0 ID=Thaps12192;Parent=Thaps12192;rank=6 chr24 . exon 227261 227287 . - . ID=Thaps12192.6;Parent=Thaps12192;constitutive=1;rank=6 chr24 . CDS 227388 227465 . - 0 ID=Thaps12192;Parent=Thaps12192;rank=5 chr24 . exon 227388 227465 . - . ID=Thaps12192.5;Parent=Thaps12192;constitutive=1;rank=5 chr24 . CDS 227592 227628 . - 0 ID=Thaps12192;Parent=Thaps12192;rank=4 chr24 . exon 227592 227628 . - . ID=Thaps12192.4;Parent=Thaps12192;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . CDS 227837 227860 . - 0 ID=Thaps12192;Parent=Thaps12192;rank=3 chr24 . exon 227837 227860 . - . ID=Thaps12192.3;Parent=Thaps12192;constitutive=1;rank=3 chr24 . CDS 227972 228039 . - 0 ID=Thaps12192;Parent=Thaps12192;rank=2 chr24 . exon 227972 228039 . - . ID=Thaps12192.2;Parent=Thaps12192;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 228128 228169 . - 0 ID=Thaps12192;Parent=Thaps12192;rank=1 chr24 ensembl protein_coding_gene 219871 220733 . - . ID=Thaps25910;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ5];external_name=CINY2;logic_name=jgi_thaps3 chr24 ensembl transcript 219871 220733 . - . ID=Thaps25910;Parent=Thaps25910;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 219871 220223 . - 0 ID=Thaps25910;Parent=Thaps25910;rank=2 chr24 . exon 219871 220223 . - . ID=Thaps25910.2;Parent=Thaps25910;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 220340 220733 . - 0 ID=Thaps25910;Parent=Thaps25910;rank=1 chr24 . exon 220340 220733 . - . ID=Thaps25910.1;Parent=Thaps25910;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . repeat_region 233042 233068 . ? . description=trf chr24 . repeat_region 234542 234586 . ? . description=trf chr24 . exon 228128 228169 . - . ID=Thaps12192.1;Parent=Thaps12192;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 229489 230607 . - . ID=Thaps12193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ8];external_name=Thaps12193;logic_name=jgi_thaps3 chr24 ensembl transcript 229489 230607 . - . ID=Thaps12193;Parent=Thaps12193;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 229489 230052 . - 0 ID=Thaps12193;Parent=Thaps12193;rank=2 chr24 . exon 229489 230052 . - . ID=Thaps12193.2;Parent=Thaps12193;constitutive=1;rank=2 chr24 . CDS 230158 230607 . - 0 ID=Thaps12193;Parent=Thaps12193;rank=1 chr24 . exon 230158 230607 . - . ID=Thaps12193.1;Parent=Thaps12193;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 233030 237592 . + . ID=Thaps25911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGQ9];external_name=Thaps25911;logic_name=jgi_thaps3 chr24 ensembl transcript 233030 237592 . + . ID=Thaps25911;Parent=Thaps25911;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 233030 233125 . + 0 ID=Thaps25911;Parent=Thaps25911;rank=1 chr24 . exon 233030 233125 . + . ID=Thaps25911.1;Parent=Thaps25911;constitutive=1;rank=1 chr24 . CDS 233214 233473 . + 0 ID=Thaps25911;Parent=Thaps25911;rank=2 chr24 . exon 233214 233473 . + . ID=Thaps25911.2;Parent=Thaps25911;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 233505 233622 . + 0 ID=Thaps25911;Parent=Thaps25911;rank=3 chr24 . exon 233505 233622 . + . ID=Thaps25911.3;Parent=Thaps25911;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 233756 234411 . + 0 ID=Thaps25911;Parent=Thaps25911;rank=4 chr24 . exon 233756 234411 . + . ID=Thaps25911.4;Parent=Thaps25911;constitutive=1;ensembl_end_phase=2;rank=4 chr24 . CDS 234502 234613 . + 0 ID=Thaps25911;Parent=Thaps25911;rank=5 chr24 . exon 234502 234613 . + . ID=Thaps25911.5;Parent=Thaps25911;constitutive=1;ensembl_end_phase=1;rank=5 chr24 . CDS 234747 234926 . + 0 ID=Thaps25911;Parent=Thaps25911;rank=6 chr24 . exon 234747 234926 . + . ID=Thaps25911.6;Parent=Thaps25911;constitutive=1;rank=6 chr24 . CDS 234983 236602 . + 0 ID=Thaps25911;Parent=Thaps25911;rank=7 chr24 . exon 234983 236602 . + . ID=Thaps25911.7;Parent=Thaps25911;constitutive=1;rank=7 chr24 . CDS 236702 237592 . + 0 ID=Thaps25911;Parent=Thaps25911;rank=8 chr24 . exon 236702 237592 . + . ID=Thaps25911.8;Parent=Thaps25911;constitutive=1;rank=8 chr24 ensembl protein_coding_gene 241613 241972 . + . ID=Thaps12196;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGR1];external_name=Thaps12196;logic_name=jgi_thaps3 chr24 ensembl transcript 241613 241972 . + . ID=Thaps12196;Parent=Thaps12196;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 241613 241972 . + 0 ID=Thaps12196;Parent=Thaps12196;rank=1 chr24 . exon 241613 241972 . + . ID=Thaps12196.1;Parent=Thaps12196;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 242584 245262 . + . ID=Thaps12197;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGR2];external_name=Thaps12197;logic_name=jgi_thaps3 chr24 ensembl transcript 242584 245262 . + . ID=Thaps12197;Parent=Thaps12197;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 242584 242786 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=1 chr24 . exon 242584 242786 . + . ID=Thaps12197.1;Parent=Thaps12197;constitutive=1;ensembl_end_phase=2;rank=1 chr24 . CDS 243033 243044 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=2 chr24 . exon 243033 243044 . + . ID=Thaps12197.2;Parent=Thaps12197;constitutive=1;rank=2 chr24 . CDS 243414 243423 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=3 chr24 . exon 243414 243423 . + . ID=Thaps12197.3;Parent=Thaps12197;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 243469 243561 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=4 chr24 . exon 243469 243561 . + . ID=Thaps12197.4;Parent=Thaps12197;constitutive=1;rank=4 chr24 . CDS 243653 243727 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=5 chr24 . exon 243653 243727 . + . ID=Thaps12197.5;Parent=Thaps12197;constitutive=1;rank=5 chr24 . CDS 243816 243883 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=6 chr24 . exon 243816 243883 . + . ID=Thaps12197.6;Parent=Thaps12197;constitutive=1;ensembl_end_phase=2;rank=6 chr24 . CDS 243995 244018 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=7 chr24 . exon 243995 244018 . + . ID=Thaps12197.7;Parent=Thaps12197;constitutive=1;rank=7 chr24 . CDS 244130 244141 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=8 chr24 . exon 244130 244141 . + . ID=Thaps12197.8;Parent=Thaps12197;constitutive=1;rank=8 chr24 . CDS 244226 244262 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=9 chr24 . exon 244226 244262 . + . ID=Thaps12197.9;Parent=Thaps12197;constitutive=1;ensembl_end_phase=1;rank=9 chr24 . CDS 244379 244402 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=10 chr24 . exon 244379 244402 . + . ID=Thaps12197.10;Parent=Thaps12197;constitutive=1;rank=10 chr24 . CDS 244705 245262 . + 0 ID=Thaps12197;Parent=Thaps12197;rank=11 chr24 . exon 244705 245262 . + . ID=Thaps12197.11;Parent=Thaps12197;constitutive=1;rank=11 chr24 ensembl protein_coding_gene 238519 241091 . - . ID=Thaps25912;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGR0];external_name=Thaps25912;logic_name=jgi_thaps3 chr24 ensembl transcript 238519 241091 . - . ID=Thaps25912;Parent=Thaps25912;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 238519 238851 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=11 chr24 . exon 238519 238851 . - . ID=Thaps25912.11;Parent=Thaps25912;constitutive=1;rank=11 chr24 . CDS 238940 239016 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=10 chr24 . exon 238940 239016 . - . ID=Thaps25912.10;Parent=Thaps25912;constitutive=1;ensembl_end_phase=2;rank=10 chr24 . CDS 239101 239123 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=9 chr24 . exon 239101 239123 . - . ID=Thaps25912.9;Parent=Thaps25912;constitutive=1;ensembl_end_phase=2;rank=9 chr24 . CDS 239214 239228 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=8 chr24 . exon 239214 239228 . - . ID=Thaps25912.8;Parent=Thaps25912;constitutive=1;rank=8 chr24 . CDS 239338 239349 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=7 chr24 . exon 239338 239349 . - . ID=Thaps25912.7;Parent=Thaps25912;constitutive=1;rank=7 chr24 . CDS 239452 239475 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=6 chr24 . exon 239452 239475 . - . ID=Thaps25912.6;Parent=Thaps25912;constitutive=1;rank=6 chr24 . CDS 239559 239627 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=5 chr24 . exon 239559 239627 . - . ID=Thaps25912.5;Parent=Thaps25912;constitutive=1;rank=5 chr24 . CDS 239710 239771 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=4 chr24 . exon 239710 239771 . - . ID=Thaps25912.4;Parent=Thaps25912;constitutive=1;ensembl_end_phase=2;rank=4 chr24 . CDS 239863 239991 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=3 chr24 . exon 239863 239991 . - . ID=Thaps25912.3;Parent=Thaps25912;constitutive=1;rank=3 chr24 . CDS 240082 240531 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=2 chr24 . exon 240082 240531 . - . ID=Thaps25912.2;Parent=Thaps25912;constitutive=1;rank=2 chr24 . CDS 240681 241091 . - 0 ID=Thaps25912;Parent=Thaps25912;rank=1 chr24 . exon 240681 241091 . - . ID=Thaps25912.1;Parent=Thaps25912;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 246847 248997 . + . ID=Thaps25913;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGR3];external_name=Thaps25913;logic_name=jgi_thaps3 chr24 ensembl transcript 246847 248997 . + . ID=Thaps25913;Parent=Thaps25913;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 246847 248490 . + 0 ID=Thaps25913;Parent=Thaps25913;rank=1 chr24 . exon 246847 248490 . + . ID=Thaps25913.1;Parent=Thaps25913;constitutive=1;rank=1 chr24 . CDS 248581 248997 . + 0 ID=Thaps25913;Parent=Thaps25913;rank=2 chr24 . repeat_region 252969 252988 . ? . description=dust chr24 . repeat_region 253213 253238 . ? . description=trf chr24 . repeat_region 256979 257039 . ? . description=dust chr24 ensembl protein_coding_gene 250763 252059 . - . ID=Thaps17860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGR4];external_name=Thaps17860;logic_name=jgi_thaps3 chr24 ensembl transcript 250763 252059 . - . ID=Thaps17860;Parent=Thaps17860;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 250763 250838 . - 0 ID=Thaps17860;Parent=Thaps17860;rank=4 chr24 . exon 250763 250838 . - . ID=Thaps17860.4;Parent=Thaps17860;constitutive=1;ensembl_end_phase=1;rank=4 chr24 . CDS 250924 251029 . - 0 ID=Thaps17860;Parent=Thaps17860;rank=3 chr24 . exon 250924 251029 . - . ID=Thaps17860.3;Parent=Thaps17860;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 251111 251260 . - 0 ID=Thaps17860;Parent=Thaps17860;rank=2 chr24 . exon 251111 251260 . - . ID=Thaps17860.2;Parent=Thaps17860;constitutive=1;rank=2 chr24 . CDS 251900 252059 . - 0 ID=Thaps17860;Parent=Thaps17860;rank=1 chr24 . exon 251900 252059 . - . ID=Thaps17860.1;Parent=Thaps17860;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . exon 248581 248997 . + . ID=Thaps25913.2;Parent=Thaps25913;constitutive=1;rank=2 chr24 ensembl protein_coding_gene 256184 256964 . - . ID=Thaps25915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGR6];external_name=Thaps25915;logic_name=jgi_thaps3 chr24 ensembl transcript 256184 256964 . - . ID=Thaps25915;Parent=Thaps25915;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 256184 256411 . - 0 ID=Thaps25915;Parent=Thaps25915;rank=3 chr24 . exon 256184 256411 . - . ID=Thaps25915.3;Parent=Thaps25915;constitutive=1;rank=3 chr24 . CDS 256499 256806 . - 0 ID=Thaps25915;Parent=Thaps25915;rank=2 chr24 . exon 256499 256806 . - . ID=Thaps25915.2;Parent=Thaps25915;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 256916 256964 . - 0 ID=Thaps25915;Parent=Thaps25915;rank=1 chr24 . exon 256916 256964 . - . ID=Thaps25915.1;Parent=Thaps25915;constitutive=1;ensembl_end_phase=1;rank=1 chr24 ensembl protein_coding_gene 254525 255856 . + . ID=Thaps43160;biotype=protein_coding;description=Probable tryptophanyl tRNA synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CGR5];external_name=TPS1;logic_name=jgi_thaps3 chr24 ensembl transcript 254525 255856 . + . ID=Thaps43160;Parent=Thaps43160;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 254525 254720 . + 0 ID=Thaps43160;Parent=Thaps43160;rank=1 chr24 . exon 254525 254720 . + . ID=Thaps43160.1;Parent=Thaps43160;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . CDS 254799 255002 . + 0 ID=Thaps43160;Parent=Thaps43160;rank=2 chr24 . exon 254799 255002 . + . ID=Thaps43160.2;Parent=Thaps43160;constitutive=1;rank=2 chr24 . CDS 255039 255856 . + 0 ID=Thaps43160;Parent=Thaps43160;rank=3 chr24 . exon 255039 255856 . + . ID=Thaps43160.3;Parent=Thaps43160;constitutive=1;ensembl_end_phase=2;rank=3 chr24 ensembl protein_coding_gene 266218 267246 . - . ID=Thaps12205;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGR8];external_name=Thaps12205;logic_name=jgi_thaps3 chr24 ensembl transcript 266218 267246 . - . ID=Thaps12205;Parent=Thaps12205;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 266218 266288 . - 0 ID=Thaps12205;Parent=Thaps12205;rank=5 chr24 . exon 266218 266288 . - . ID=Thaps12205.5;Parent=Thaps12205;constitutive=1;ensembl_end_phase=2;rank=5 chr24 . CDS 266376 266486 . - 0 ID=Thaps12205;Parent=Thaps12205;rank=4 chr24 . exon 266376 266486 . - . ID=Thaps12205.4;Parent=Thaps12205;constitutive=1;rank=4 chr24 . CDS 266590 266971 . - 0 ID=Thaps12205;Parent=Thaps12205;rank=3 chr24 . exon 266590 266971 . - . ID=Thaps12205.3;Parent=Thaps12205;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 267071 267102 . - 0 ID=Thaps12205;Parent=Thaps12205;rank=2 chr24 . exon 267071 267102 . - . ID=Thaps12205.2;Parent=Thaps12205;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 267198 267246 . - 0 ID=Thaps12205;Parent=Thaps12205;rank=1 chr24 . exon 267198 267246 . - . ID=Thaps12205.1;Parent=Thaps12205;constitutive=1;ensembl_end_phase=1;rank=1 chr24 ensembl protein_coding_gene 259138 259799 . - . ID=Thaps25916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGR7];external_name=Thaps25916;logic_name=jgi_thaps3 chr24 ensembl transcript 259138 259799 . - . ID=Thaps25916;Parent=Thaps25916;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 259138 259374 . - 0 ID=Thaps25916;Parent=Thaps25916;rank=3 chr24 . exon 259138 259374 . - . ID=Thaps25916.3;Parent=Thaps25916;constitutive=1;rank=3 chr24 . CDS 259613 259674 . - 0 ID=Thaps25916;Parent=Thaps25916;rank=2 chr24 . exon 259613 259674 . - . ID=Thaps25916.2;Parent=Thaps25916;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 259748 259799 . - 0 ID=Thaps25916;Parent=Thaps25916;rank=1 chr24 . exon 259748 259799 . - . ID=Thaps25916.1;Parent=Thaps25916;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . repeat_region 275456 275463 . ? . description=dust chr24 . repeat_region 276097 276139 . ? . description=trf chr24 ensembl protein_coding_gene 267756 269876 . - . ID=Thaps12206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGR9];external_name=Thaps12206;logic_name=jgi_thaps3 chr24 ensembl transcript 267756 269876 . - . ID=Thaps12206;Parent=Thaps12206;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 267756 269876 . - 0 ID=Thaps12206;Parent=Thaps12206;rank=1 chr24 . exon 267756 269876 . - . ID=Thaps12206.1;Parent=Thaps12206;constitutive=1;rank=1 chr24 ensembl protein_coding_gene 271241 274230 . + . ID=Thaps12207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGS0];external_name=Thaps12207;logic_name=jgi_thaps3 chr24 ensembl transcript 271241 274230 . + . ID=Thaps12207;Parent=Thaps12207;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 271241 272294 . + 0 ID=Thaps12207;Parent=Thaps12207;rank=1 chr24 . exon 271241 272294 . + . ID=Thaps12207.1;Parent=Thaps12207;constitutive=1;ensembl_end_phase=1;rank=1 chr24 . CDS 272375 272643 . + 0 ID=Thaps12207;Parent=Thaps12207;rank=2 chr24 . exon 272375 272643 . + . ID=Thaps12207.2;Parent=Thaps12207;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 272721 272786 . + 0 ID=Thaps12207;Parent=Thaps12207;rank=3 chr24 . exon 272721 272786 . + . ID=Thaps12207.3;Parent=Thaps12207;constitutive=1;rank=3 chr24 . CDS 273017 273052 . + 0 ID=Thaps12207;Parent=Thaps12207;rank=4 chr24 . exon 273017 273052 . + . ID=Thaps12207.4;Parent=Thaps12207;constitutive=1;rank=4 chr24 . CDS 273135 273158 . + 0 ID=Thaps12207;Parent=Thaps12207;rank=5 chr24 . exon 273135 273158 . + . ID=Thaps12207.5;Parent=Thaps12207;constitutive=1;rank=5 chr24 . CDS 273247 274230 . + 0 ID=Thaps12207;Parent=Thaps12207;rank=6 chr24 . exon 273247 274230 . + . ID=Thaps12207.6;Parent=Thaps12207;constitutive=1;rank=6 chr24 ensembl protein_coding_gene 275693 276907 . + . ID=Thaps25917;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGS1];external_name=CINY3;logic_name=jgi_thaps3 chr24 ensembl transcript 275693 276907 . + . ID=Thaps25917;Parent=Thaps25917;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 275693 276037 . + 0 ID=Thaps25917;Parent=Thaps25917;rank=1 chr24 . exon 275693 276037 . + . ID=Thaps25917.1;Parent=Thaps25917;constitutive=1;rank=1 chr24 . CDS 276102 276796 . + 0 ID=Thaps25917;Parent=Thaps25917;rank=2 chr24 . exon 276102 276796 . + . ID=Thaps25917.2;Parent=Thaps25917;constitutive=1;ensembl_end_phase=2;rank=2 chr24 . CDS 276889 276907 . + 0 ID=Thaps25917;Parent=Thaps25917;rank=3 chr24 . exon 276889 276907 . + . ID=Thaps25917.3;Parent=Thaps25917;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . repeat_region 287318 287485 . - . description=SAT1_TP chr24 ensembl protein_coding_gene 277791 279373 . - . ID=Thaps12209;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGS2];external_name=Thaps12209;logic_name=jgi_thaps3 chr24 ensembl transcript 277791 279373 . - . ID=Thaps12209;Parent=Thaps12209;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 277791 277952 . - 0 ID=Thaps12209;Parent=Thaps12209;rank=2 chr24 . exon 277791 277952 . - . ID=Thaps12209.2;Parent=Thaps12209;constitutive=1;rank=2 chr24 . CDS 278240 279373 . - 0 ID=Thaps12209;Parent=Thaps12209;rank=1 chr24 . exon 278240 279373 . - . ID=Thaps12209.1;Parent=Thaps12209;constitutive=1;rank=1 chr24 . repeat_region 287288 288278 . ? . description=trf chr24 . repeat_region 288497 289098 . ? . description=trf chr24 . repeat_region 289352 293667 . ? . description=trf chr24 . repeat_region 290067 290089 . ? . description=trf chr24 . repeat_region 290067 290098 . ? . description=dust chr24 . repeat_region 290547 290583 . ? . description=dust chr24 . repeat_region 290548 290574 . ? . description=trf chr24 . repeat_region 291033 291063 . ? . description=trf chr24 . repeat_region 291033 291063 . ? . description=dust chr24 . repeat_region 291535 291557 . ? . description=trf chr24 . repeat_region 291535 291566 . ? . description=dust chr24 . repeat_region 292015 292051 . ? . description=dust chr24 . repeat_region 292016 292042 . ? . description=trf chr24 . repeat_region 292501 292527 . ? . description=trf chr24 . repeat_region 293476 293507 . ? . description=dust chr24 . repeat_region 293477 293507 . ? . description=trf chr24 . repeat_region 293897 294841 . ? . description=trf chr24 . repeat_region 295111 297349 . ? . description=trf chr24 . repeat_region 295346 295372 . ? . description=trf chr24 . repeat_region 295830 295852 . ? . description=trf chr24 . repeat_region 295830 295861 . ? . description=dust chr24 . repeat_region 296310 296346 . ? . description=dust chr24 . repeat_region 296311 296337 . ? . description=trf chr24 . repeat_region 296796 296818 . ? . description=trf chr24 . repeat_region 296796 296827 . ? . description=dust chr24 ensembl protein_coding_gene 288326 289144 . - . ID=Thaps264954;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGS3];external_name=Thaps264954;logic_name=jgi_thaps3 chr24 ensembl transcript 288326 289144 . - . ID=Thaps264954;Parent=Thaps264954;biotype=protein_coding;logic_name=jgi_thaps3 chr24 . CDS 288326 288329 . - 0 ID=Thaps264954;Parent=Thaps264954;rank=3 chr24 . exon 288326 288329 . - . ID=Thaps264954.3;Parent=Thaps264954;constitutive=1;ensembl_end_phase=1;rank=3 chr24 . CDS 288553 288570 . - 0 ID=Thaps264954;Parent=Thaps264954;rank=2 chr24 . exon 288553 288570 . - . ID=Thaps264954.2;Parent=Thaps264954;constitutive=1;rank=2 chr24 . CDS 288745 289144 . - 0 ID=Thaps264954;Parent=Thaps264954;rank=1 chr24 . exon 288745 289144 . - . ID=Thaps264954.1;Parent=Thaps264954;constitutive=1;ensembl_end_phase=1;rank=1 ##gff-version 3 ##sequence-region 23 1 454954 chr23 . repeat_region 1 609 . - . description=Harbinger2_TP chr23 . repeat_region 365 433 . ? . description=trf chr23 . repeat_region 609 884 . + . description=TE2_TP chr23 . repeat_region 815 844 . ? . description=trf chr23 . repeat_region 881 936 . ? . description=trf chr23 . repeat_region 881 1286 . + . description=TE2_TP chr23 . repeat_region 971 1083 . ? . description=trf chr23 . repeat_region 4937 4962 . ? . description=trf chr23 . repeat_region 4937 4962 . ? . description=dust chr23 ensembl protein_coding_gene 4690 15006 . + . ID=Thaps11974;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG37];external_name=Thaps11974;logic_name=jgi_thaps3 chr23 ensembl transcript 4690 15006 . + . ID=Thaps11974;Parent=Thaps11974;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 4690 14763 . + 0 ID=Thaps11974;Parent=Thaps11974;rank=1 chr23 . exon 4690 14763 . + . ID=Thaps11974.1;Parent=Thaps11974;constitutive=1;rank=1 chr23 . CDS 14848 15006 . + 0 ID=Thaps11974;Parent=Thaps11974;rank=2 chr23 ensembl protein_coding_gene 1400 4297 . - . ID=Thaps25810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG36];external_name=Thaps25810;logic_name=jgi_thaps3 chr23 ensembl transcript 1400 4297 . - . ID=Thaps25810;Parent=Thaps25810;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 1400 4297 . - 0 ID=Thaps25810;Parent=Thaps25810;rank=1 chr23 . exon 1400 4297 . - . ID=Thaps25810.1;Parent=Thaps25810;constitutive=1;rank=1 chr23 . exon 14848 15006 . + . ID=Thaps11974.2;Parent=Thaps11974;constitutive=1;rank=2 chr23 ensembl protein_coding_gene 15513 15869 . - . ID=Thaps11975;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG38];external_name=Thaps11975;logic_name=jgi_thaps3 chr23 ensembl transcript 15513 15869 . - . ID=Thaps11975;Parent=Thaps11975;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 15513 15869 . - 0 ID=Thaps11975;Parent=Thaps11975;rank=1 chr23 . exon 15513 15869 . - . ID=Thaps11975.1;Parent=Thaps11975;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 17517 23900 . + . ID=Thaps25811;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG39];external_name=Thaps25811;logic_name=jgi_thaps3 chr23 ensembl transcript 17517 23900 . + . ID=Thaps25811;Parent=Thaps25811;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 17517 17586 . + 0 ID=Thaps25811;Parent=Thaps25811;rank=1 chr23 . exon 17517 17586 . + . ID=Thaps25811.1;Parent=Thaps25811;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 17726 19248 . + 0 ID=Thaps25811;Parent=Thaps25811;rank=2 chr23 . exon 17726 19248 . + . ID=Thaps25811.2;Parent=Thaps25811;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 19349 20196 . + 0 ID=Thaps25811;Parent=Thaps25811;rank=3 chr23 . exon 19349 20196 . + . ID=Thaps25811.3;Parent=Thaps25811;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . CDS 20275 22764 . + 0 ID=Thaps25811;Parent=Thaps25811;rank=4 chr23 . CDS 22847 23900 . + 0 ID=Thaps25811;Parent=Thaps25811;rank=5 chr23 . repeat_region 24453 24508 . ? . description=dust chr23 ensembl protein_coding_gene 24237 26337 . + . ID=Thaps11977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG40];external_name=Thaps11977;logic_name=jgi_thaps3 chr23 ensembl transcript 24237 26337 . + . ID=Thaps11977;Parent=Thaps11977;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 24237 24773 . + 0 ID=Thaps11977;Parent=Thaps11977;rank=1 chr23 . exon 24237 24773 . + . ID=Thaps11977.1;Parent=Thaps11977;constitutive=1;rank=1 chr23 . CDS 24867 25950 . + 0 ID=Thaps11977;Parent=Thaps11977;rank=2 chr23 . exon 24867 25950 . + . ID=Thaps11977.2;Parent=Thaps11977;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 26024 26337 . + 0 ID=Thaps11977;Parent=Thaps11977;rank=3 chr23 . exon 26024 26337 . + . ID=Thaps11977.3;Parent=Thaps11977;constitutive=1;ensembl_end_phase=2;rank=3 chr23 ensembl protein_coding_gene 26400 29102 . - . ID=Thaps11978;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG41];external_name=Thaps11978;logic_name=jgi_thaps3 chr23 ensembl transcript 26400 29102 . - . ID=Thaps11978;Parent=Thaps11978;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 26400 29102 . - 0 ID=Thaps11978;Parent=Thaps11978;rank=1 chr23 . exon 26400 29102 . - . ID=Thaps11978.1;Parent=Thaps11978;constitutive=1;rank=1 chr23 . exon 20275 22764 . + . ID=Thaps25811.4;Parent=Thaps25811;constitutive=1;rank=4 chr23 . exon 22847 23900 . + . ID=Thaps25811.5;Parent=Thaps25811;constitutive=1;ensembl_end_phase=1;rank=5 chr23 . repeat_region 35595 35621 . ? . description=trf chr23 . repeat_region 36174 36206 . ? . description=trf chr23 ensembl protein_coding_gene 37213 37613 . + . ID=Thaps264883;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG43];external_name=Thaps264883;logic_name=jgi_thaps3 chr23 ensembl transcript 37213 37613 . + . ID=Thaps264883;Parent=Thaps264883;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 37213 37613 . + 0 ID=Thaps264883;Parent=Thaps264883;rank=1 chr23 . exon 37213 37613 . + . ID=Thaps264883.1;Parent=Thaps264883;constitutive=1;ensembl_end_phase=2;rank=1 chr23 ensembl protein_coding_gene 37689 38702 . - . ID=Thaps38813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG44];external_name=Thaps38813;logic_name=jgi_thaps3 chr23 ensembl transcript 37689 38702 . - . ID=Thaps38813;Parent=Thaps38813;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 37689 38702 . - 0 ID=Thaps38813;Parent=Thaps38813;rank=1 chr23 . exon 37689 38702 . - . ID=Thaps38813.1;Parent=Thaps38813;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 32982 33485 . - . ID=Thaps38860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG42];external_name=Thaps38860;logic_name=jgi_thaps3 chr23 ensembl transcript 32982 33485 . - . ID=Thaps38860;Parent=Thaps38860;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 32982 33485 . - 0 ID=Thaps38860;Parent=Thaps38860;rank=1 chr23 . exon 32982 33485 . - . ID=Thaps38860.1;Parent=Thaps38860;constitutive=1;rank=1 chr23 . biological_region 41385 41387 0.999 + . logic_name=eponine chr23 . repeat_region 43784 43796 . ? . description=dust chr23 . repeat_region 47932 47950 . ? . description=dust chr23 ensembl protein_coding_gene 40685 41578 . + . ID=Thaps11981;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG45];external_name=Thaps11981;logic_name=jgi_thaps3 chr23 ensembl transcript 40685 41578 . + . ID=Thaps11981;Parent=Thaps11981;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 40685 41578 . + 0 ID=Thaps11981;Parent=Thaps11981;rank=1 chr23 . exon 40685 41578 . + . ID=Thaps11981.1;Parent=Thaps11981;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 46444 47312 . - . ID=Thaps11984;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG48];external_name=Thaps11984;logic_name=jgi_thaps3 chr23 ensembl transcript 46444 47312 . - . ID=Thaps11984;Parent=Thaps11984;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 46444 46691 . - 0 ID=Thaps11984;Parent=Thaps11984;rank=3 chr23 . exon 46444 46691 . - . ID=Thaps11984.3;Parent=Thaps11984;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . CDS 46734 47092 . - 0 ID=Thaps11984;Parent=Thaps11984;rank=2 chr23 . exon 46734 47092 . - . ID=Thaps11984.2;Parent=Thaps11984;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 47260 47312 . - 0 ID=Thaps11984;Parent=Thaps11984;rank=1 chr23 . exon 47260 47312 . - . ID=Thaps11984.1;Parent=Thaps11984;constitutive=1;ensembl_end_phase=2;rank=1 chr23 ensembl protein_coding_gene 41682 42653 . - . ID=Thaps25812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG46];external_name=Thaps25812;logic_name=jgi_thaps3 chr23 ensembl transcript 41682 42653 . - . ID=Thaps25812;Parent=Thaps25812;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 41682 42653 . - 0 ID=Thaps25812;Parent=Thaps25812;rank=1 chr23 . exon 41682 42653 . - . ID=Thaps25812.1;Parent=Thaps25812;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 43942 46251 . + . ID=Thaps25813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG47];external_name=Thaps25813;logic_name=jgi_thaps3 chr23 ensembl transcript 43942 46251 . + . ID=Thaps25813;Parent=Thaps25813;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 43942 44119 . + 0 ID=Thaps25813;Parent=Thaps25813;rank=1 chr23 . exon 43942 44119 . + . ID=Thaps25813.1;Parent=Thaps25813;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 44208 44880 . + 0 ID=Thaps25813;Parent=Thaps25813;rank=2 chr23 . exon 44208 44880 . + . ID=Thaps25813.2;Parent=Thaps25813;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 44957 45056 . + 0 ID=Thaps25813;Parent=Thaps25813;rank=3 chr23 . exon 44957 45056 . + . ID=Thaps25813.3;Parent=Thaps25813;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 45136 45430 . + 0 ID=Thaps25813;Parent=Thaps25813;rank=4 chr23 . exon 45136 45430 . + . ID=Thaps25813.4;Parent=Thaps25813;constitutive=1;ensembl_end_phase=1;rank=4 chr23 . CDS 45533 46251 . + 0 ID=Thaps25813;Parent=Thaps25813;rank=5 chr23 . exon 45533 46251 . + . ID=Thaps25813.5;Parent=Thaps25813;constitutive=1;ensembl_end_phase=2;rank=5 chr23 ensembl protein_coding_gene 47712 49448 . + . ID=Thaps25814;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG49];external_name=Thaps25814;logic_name=jgi_thaps3 chr23 ensembl transcript 47712 49448 . + . ID=Thaps25814;Parent=Thaps25814;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 47712 49448 . + 0 ID=Thaps25814;Parent=Thaps25814;rank=1 chr23 . exon 47712 49448 . + . ID=Thaps25814.1;Parent=Thaps25814;constitutive=1;rank=1 chr23 . repeat_region 52294 52361 . ? . description=trf chr23 ensembl protein_coding_gene 56551 58344 . + . ID=Thaps11988;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG52];external_name=Thaps11988;logic_name=jgi_thaps3 chr23 ensembl transcript 56551 58344 . + . ID=Thaps11988;Parent=Thaps11988;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 56551 57303 . + 0 ID=Thaps11988;Parent=Thaps11988;rank=1 chr23 . exon 56551 57303 . + . ID=Thaps11988.1;Parent=Thaps11988;constitutive=1;rank=1 chr23 . CDS 57397 58344 . + 0 ID=Thaps11988;Parent=Thaps11988;rank=2 chr23 . exon 57397 58344 . + . ID=Thaps11988.2;Parent=Thaps11988;constitutive=1;rank=2 chr23 ensembl protein_coding_gene 49838 52924 . + . ID=Thaps25815;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG50];external_name=Thaps25815;logic_name=jgi_thaps3 chr23 ensembl transcript 49838 52924 . + . ID=Thaps25815;Parent=Thaps25815;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 49838 50065 . + 0 ID=Thaps25815;Parent=Thaps25815;rank=1 chr23 . exon 49838 50065 . + . ID=Thaps25815.1;Parent=Thaps25815;constitutive=1;rank=1 chr23 . CDS 50155 50871 . + 0 ID=Thaps25815;Parent=Thaps25815;rank=2 chr23 . exon 50155 50871 . + . ID=Thaps25815.2;Parent=Thaps25815;constitutive=1;rank=2 chr23 . CDS 50996 51514 . + 0 ID=Thaps25815;Parent=Thaps25815;rank=3 chr23 . exon 50996 51514 . + . ID=Thaps25815.3;Parent=Thaps25815;constitutive=1;rank=3 chr23 . CDS 52030 52398 . + 0 ID=Thaps25815;Parent=Thaps25815;rank=4 chr23 . exon 52030 52398 . + . ID=Thaps25815.4;Parent=Thaps25815;constitutive=1;rank=4 chr23 . CDS 52481 52814 . + 0 ID=Thaps25815;Parent=Thaps25815;rank=5 chr23 . exon 52481 52814 . + . ID=Thaps25815.5;Parent=Thaps25815;constitutive=1;ensembl_end_phase=1;rank=5 chr23 . CDS 52905 52924 . + 0 ID=Thaps25815;Parent=Thaps25815;rank=6 chr23 . exon 52905 52924 . + . ID=Thaps25815.6;Parent=Thaps25815;constitutive=1;ensembl_end_phase=2;rank=6 chr23 ensembl protein_coding_gene 53289 55981 . - . ID=Thaps25816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG51];external_name=Thaps25816;logic_name=jgi_thaps3 chr23 ensembl transcript 53289 55981 . - . ID=Thaps25816;Parent=Thaps25816;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 53289 55180 . - 0 ID=Thaps25816;Parent=Thaps25816;rank=3 chr23 . exon 53289 55180 . - . ID=Thaps25816.3;Parent=Thaps25816;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . CDS 55242 55615 . - 0 ID=Thaps25816;Parent=Thaps25816;rank=2 chr23 . exon 55242 55615 . - . ID=Thaps25816.2;Parent=Thaps25816;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 55857 55981 . - 0 ID=Thaps25816;Parent=Thaps25816;rank=1 chr23 . exon 55857 55981 . - . ID=Thaps25816.1;Parent=Thaps25816;constitutive=1;ensembl_end_phase=2;rank=1 chr23 ensembl protein_coding_gene 63970 69428 . + . ID=Thaps270116;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG53];external_name=Thaps270116;logic_name=jgi_thaps3 chr23 ensembl transcript 63970 69428 . + . ID=Thaps270116;Parent=Thaps270116;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 63970 64220 . + 0 ID=Thaps270116;Parent=Thaps270116;rank=1 chr23 . exon 63970 64220 . + . ID=Thaps270116.1;Parent=Thaps270116;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 64260 64395 . + 0 ID=Thaps270116;Parent=Thaps270116;rank=2 chr23 . exon 64260 64395 . + . ID=Thaps270116.2;Parent=Thaps270116;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 64496 65005 . + 0 ID=Thaps270116;Parent=Thaps270116;rank=3 chr23 . exon 64496 65005 . + . ID=Thaps270116.3;Parent=Thaps270116;constitutive=1;rank=3 chr23 . CDS 65086 67125 . + 0 ID=Thaps270116;Parent=Thaps270116;rank=4 chr23 . exon 65086 67125 . + . ID=Thaps270116.4;Parent=Thaps270116;constitutive=1;rank=4 chr23 . CDS 67457 67661 . + 0 ID=Thaps270116;Parent=Thaps270116;rank=5 chr23 . exon 67457 67661 . + . ID=Thaps270116.5;Parent=Thaps270116;constitutive=1;ensembl_end_phase=1;rank=5 chr23 . CDS 67867 69107 . + 0 ID=Thaps270116;Parent=Thaps270116;rank=6 chr23 . exon 67867 69107 . + . ID=Thaps270116.6;Parent=Thaps270116;constitutive=1;ensembl_end_phase=2;rank=6 chr23 . CDS 69276 69428 . + 0 ID=Thaps270116;Parent=Thaps270116;rank=7 chr23 . repeat_region 73645 73658 . ? . description=dust chr23 ensembl protein_coding_gene 78651 79688 . + . ID=Thaps14638;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG56];external_name=Thaps14638;logic_name=jgi_thaps3 chr23 ensembl transcript 78651 79688 . + . ID=Thaps14638;Parent=Thaps14638;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 78651 78837 . + 0 ID=Thaps14638;Parent=Thaps14638;rank=1 chr23 . exon 78651 78837 . + . ID=Thaps14638.1;Parent=Thaps14638;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 78958 79688 . + 0 ID=Thaps14638;Parent=Thaps14638;rank=2 chr23 . exon 78958 79688 . + . ID=Thaps14638.2;Parent=Thaps14638;constitutive=1;ensembl_end_phase=2;rank=2 chr23 ensembl protein_coding_gene 75181 76041 . + . ID=Thaps264885;biotype=protein_coding;description=Small GTPase [Source:UniProtKB/TrEMBL%3BAcc:B8CG54];external_name=Thaps264885;logic_name=jgi_thaps3 chr23 ensembl transcript 75181 76041 . + . ID=Thaps264885;Parent=Thaps264885;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 75181 75382 . + 0 ID=Thaps264885;Parent=Thaps264885;rank=1 chr23 . exon 75181 75382 . + . ID=Thaps264885.1;Parent=Thaps264885;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 75482 75879 . + 0 ID=Thaps264885;Parent=Thaps264885;rank=2 chr23 . exon 75482 75879 . + . ID=Thaps264885.2;Parent=Thaps264885;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 75973 76041 . + 0 ID=Thaps264885;Parent=Thaps264885;rank=3 chr23 . exon 75973 76041 . + . ID=Thaps264885.3;Parent=Thaps264885;constitutive=1;rank=3 chr23 . exon 69276 69428 . + . ID=Thaps270116.7;Parent=Thaps270116;constitutive=1;rank=7 chr23 ensembl protein_coding_gene 77785 78105 . - . ID=Thaps38802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG55];external_name=Thaps38802;logic_name=jgi_thaps3 chr23 ensembl transcript 77785 78105 . - . ID=Thaps38802;Parent=Thaps38802;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 77785 78105 . - 0 ID=Thaps38802;Parent=Thaps38802;rank=1 chr23 . exon 77785 78105 . - . ID=Thaps38802.1;Parent=Thaps38802;constitutive=1;rank=1 chr23 . repeat_region 83906 84392 . - . description=scaffold_23_100_2_269328_272670 chr23 . repeat_region 87574 87595 . ? . description=trf chr23 ensembl protein_coding_gene 81225 82688 . + . ID=Thaps11993;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG57];external_name=Thaps11993;logic_name=jgi_thaps3 chr23 ensembl transcript 81225 82688 . + . ID=Thaps11993;Parent=Thaps11993;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 81225 82688 . + 0 ID=Thaps11993;Parent=Thaps11993;rank=1 chr23 . exon 81225 82688 . + . ID=Thaps11993.1;Parent=Thaps11993;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 87259 91071 . + . ID=Thaps25820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG59];external_name=Thaps25820;logic_name=jgi_thaps3 chr23 ensembl transcript 87259 91071 . + . ID=Thaps25820;Parent=Thaps25820;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 87259 91071 . + 0 ID=Thaps25820;Parent=Thaps25820;rank=1 chr23 . exon 87259 91071 . + . ID=Thaps25820.1;Parent=Thaps25820;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 84797 85309 . - . ID=Thaps38827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG58];external_name=Thaps38827;logic_name=jgi_thaps3 chr23 ensembl transcript 84797 85309 . - . ID=Thaps38827;Parent=Thaps38827;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 84797 85309 . - 0 ID=Thaps38827;Parent=Thaps38827;rank=1 chr23 . exon 84797 85309 . - . ID=Thaps38827.1;Parent=Thaps38827;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 91408 94551 . - . ID=Thaps11996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG60];external_name=Thaps11996;logic_name=jgi_thaps3 chr23 ensembl transcript 91408 94551 . - . ID=Thaps11996;Parent=Thaps11996;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 91408 94551 . - 0 ID=Thaps11996;Parent=Thaps11996;rank=1 chr23 . exon 91408 94551 . - . ID=Thaps11996.1;Parent=Thaps11996;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 95136 97103 . - . ID=Thaps25821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG61];external_name=Thaps25821;logic_name=jgi_thaps3 chr23 ensembl transcript 95136 97103 . - . ID=Thaps25821;Parent=Thaps25821;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 95136 97103 . - 0 ID=Thaps25821;Parent=Thaps25821;rank=1 chr23 . exon 95136 97103 . - . ID=Thaps25821.1;Parent=Thaps25821;constitutive=1;rank=1 chr23 . repeat_region 99999 100022 . ? . description=trf chr23 . biological_region 104902 104904 0.999 - . logic_name=eponine chr23 . biological_region 104948 104949 0.999 - . logic_name=eponine chr23 . biological_region 104978 104979 0.999 - . logic_name=eponine chr23 . repeat_region 105587 105599 . ? . description=dust chr23 . repeat_region 106049 106111 . ? . description=dust chr23 ensembl protein_coding_gene 99475 101625 . + . ID=Thaps11998;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG62];external_name=Thaps11998;logic_name=jgi_thaps3 chr23 ensembl transcript 99475 101625 . + . ID=Thaps11998;Parent=Thaps11998;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 99475 101625 . + 0 ID=Thaps11998;Parent=Thaps11998;rank=1 chr23 . exon 99475 101625 . + . ID=Thaps11998.1;Parent=Thaps11998;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 106074 106592 . + . ID=Thaps38780;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG64];external_name=Thaps38780;logic_name=jgi_thaps3 chr23 ensembl transcript 106074 106592 . + . ID=Thaps38780;Parent=Thaps38780;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 106074 106592 . + 0 ID=Thaps38780;Parent=Thaps38780;rank=1 chr23 . exon 106074 106592 . + . ID=Thaps38780.1;Parent=Thaps38780;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 103180 105171 . - . ID=Thaps43097;biotype=protein_coding;description=Importin alpha 1 subunit-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG63];external_name=Thaps43097;logic_name=jgi_thaps3 chr23 ensembl transcript 103180 105171 . - . ID=Thaps43097;Parent=Thaps43097;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 103180 103476 . - 0 ID=Thaps43097;Parent=Thaps43097;rank=4 chr23 . exon 103180 103476 . - . ID=Thaps43097.4;Parent=Thaps43097;constitutive=1;rank=4 chr23 . CDS 103569 104327 . - 0 ID=Thaps43097;Parent=Thaps43097;rank=3 chr23 . exon 103569 104327 . - . ID=Thaps43097.3;Parent=Thaps43097;constitutive=1;rank=3 chr23 . CDS 104455 105063 . - 0 ID=Thaps43097;Parent=Thaps43097;rank=2 chr23 . exon 104455 105063 . - . ID=Thaps43097.2;Parent=Thaps43097;constitutive=1;rank=2 chr23 . CDS 105154 105171 . - 0 ID=Thaps43097;Parent=Thaps43097;rank=1 chr23 . exon 105154 105171 . - . ID=Thaps43097.1;Parent=Thaps43097;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 116432 120014 . + . ID=Thaps25824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG67];external_name=Thaps25824;logic_name=jgi_thaps3 chr23 ensembl transcript 116432 120014 . + . ID=Thaps25824;Parent=Thaps25824;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 116432 119104 . + 0 ID=Thaps25824;Parent=Thaps25824;rank=1 chr23 . exon 116432 119104 . + . ID=Thaps25824.1;Parent=Thaps25824;constitutive=1;rank=1 chr23 . CDS 119318 119562 . + 0 ID=Thaps25824;Parent=Thaps25824;rank=2 chr23 . CDS 119639 120014 . + 0 ID=Thaps25824;Parent=Thaps25824;rank=3 chr23 ensembl protein_coding_gene 113365 116262 . - . ID=Thaps264891;biotype=protein_coding;description=Glucosylceramidase [Source:UniProtKB/TrEMBL%3BAcc:B8CG66];external_name=Thaps264891;logic_name=jgi_thaps3 chr23 ensembl transcript 113365 116262 . - . ID=Thaps264891;Parent=Thaps264891;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 113365 114214 . - 0 ID=Thaps264891;Parent=Thaps264891;rank=8 chr23 . exon 113365 114214 . - . ID=Thaps264891.8;Parent=Thaps264891;constitutive=1;ensembl_end_phase=1;rank=8 chr23 . CDS 114323 114383 . - 0 ID=Thaps264891;Parent=Thaps264891;rank=7 chr23 . exon 114323 114383 . - . ID=Thaps264891.7;Parent=Thaps264891;constitutive=1;ensembl_end_phase=1;rank=7 chr23 . CDS 114477 114690 . - 0 ID=Thaps264891;Parent=Thaps264891;rank=6 chr23 . exon 114477 114690 . - . ID=Thaps264891.6;Parent=Thaps264891;constitutive=1;ensembl_end_phase=1;rank=6 chr23 . CDS 114724 114996 . - 0 ID=Thaps264891;Parent=Thaps264891;rank=5 chr23 . exon 114724 114996 . - . ID=Thaps264891.5;Parent=Thaps264891;constitutive=1;rank=5 chr23 . CDS 115083 115153 . - 0 ID=Thaps264891;Parent=Thaps264891;rank=4 chr23 . exon 115083 115153 . - . ID=Thaps264891.4;Parent=Thaps264891;constitutive=1;ensembl_end_phase=2;rank=4 chr23 . CDS 115202 115474 . - 0 ID=Thaps264891;Parent=Thaps264891;rank=3 chr23 . exon 115202 115474 . - . ID=Thaps264891.3;Parent=Thaps264891;constitutive=1;rank=3 chr23 . CDS 115568 115693 . - 0 ID=Thaps264891;Parent=Thaps264891;rank=2 chr23 . exon 115568 115693 . - . ID=Thaps264891.2;Parent=Thaps264891;constitutive=1;rank=2 chr23 . CDS 115838 116262 . - 0 ID=Thaps264891;Parent=Thaps264891;rank=1 chr23 . exon 115838 116262 . - . ID=Thaps264891.1;Parent=Thaps264891;constitutive=1;ensembl_end_phase=2;rank=1 chr23 ensembl protein_coding_gene 109744 112697 . - . ID=Thaps38789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG65];external_name=Thaps38789;logic_name=jgi_thaps3 chr23 ensembl transcript 109744 112697 . - . ID=Thaps38789;Parent=Thaps38789;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 109744 110694 . - 0 ID=Thaps38789;Parent=Thaps38789;rank=3 chr23 . exon 109744 110694 . - . ID=Thaps38789.3;Parent=Thaps38789;constitutive=1;rank=3 chr23 . CDS 111829 112178 . - 0 ID=Thaps38789;Parent=Thaps38789;rank=2 chr23 . exon 111829 112178 . - . ID=Thaps38789.2;Parent=Thaps38789;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 112259 112697 . - 0 ID=Thaps38789;Parent=Thaps38789;rank=1 chr23 . exon 112259 112697 . - . ID=Thaps38789.1;Parent=Thaps38789;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . repeat_region 120245 120332 . ? . description=trf chr23 . repeat_region 126077 126114 . ? . description=trf chr23 . repeat_region 126781 126848 . ? . description=dust chr23 . repeat_region 126782 126816 . ? . description=trf chr23 . repeat_region 126785 126813 . ? . description=trf chr23 . repeat_region 126791 126822 . ? . description=trf chr23 . exon 119318 119562 . + . ID=Thaps25824.2;Parent=Thaps25824;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . exon 119639 120014 . + . ID=Thaps25824.3;Parent=Thaps25824;constitutive=1;ensembl_end_phase=1;rank=3 chr23 ensembl protein_coding_gene 120711 122810 . - . ID=Thaps25825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG68];external_name=Thaps25825;logic_name=jgi_thaps3 chr23 ensembl transcript 120711 122810 . - . ID=Thaps25825;Parent=Thaps25825;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 120711 120936 . - 0 ID=Thaps25825;Parent=Thaps25825;rank=2 chr23 . exon 120711 120936 . - . ID=Thaps25825.2;Parent=Thaps25825;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 120982 122810 . - 0 ID=Thaps25825;Parent=Thaps25825;rank=1 chr23 . exon 120982 122810 . - . ID=Thaps25825.1;Parent=Thaps25825;constitutive=1;ensembl_end_phase=2;rank=1 chr23 ensembl protein_coding_gene 123613 126371 . - . ID=Thaps38776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG69];external_name=Thaps38776;logic_name=jgi_thaps3 chr23 ensembl transcript 123613 126371 . - . ID=Thaps38776;Parent=Thaps38776;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 123613 124016 . - 0 ID=Thaps38776;Parent=Thaps38776;rank=5 chr23 . exon 123613 124016 . - . ID=Thaps38776.5;Parent=Thaps38776;constitutive=1;ensembl_end_phase=2;rank=5 chr23 . CDS 124102 124642 . - 0 ID=Thaps38776;Parent=Thaps38776;rank=4 chr23 . exon 124102 124642 . - . ID=Thaps38776.4;Parent=Thaps38776;constitutive=1;ensembl_end_phase=1;rank=4 chr23 . CDS 124782 125343 . - 0 ID=Thaps38776;Parent=Thaps38776;rank=3 chr23 . exon 124782 125343 . - . ID=Thaps38776.3;Parent=Thaps38776;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 125410 125908 . - 0 ID=Thaps38776;Parent=Thaps38776;rank=2 chr23 . exon 125410 125908 . - . ID=Thaps38776.2;Parent=Thaps38776;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 126074 126371 . - 0 ID=Thaps38776;Parent=Thaps38776;rank=1 chr23 . exon 126074 126371 . - . ID=Thaps38776.1;Parent=Thaps38776;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 131205 132767 . + . ID=Thaps12008;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG71];external_name=Thaps12008;logic_name=jgi_thaps3 chr23 ensembl transcript 131205 132767 . + . ID=Thaps12008;Parent=Thaps12008;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 131205 132767 . + 0 ID=Thaps12008;Parent=Thaps12008;rank=1 chr23 . exon 131205 132767 . + . ID=Thaps12008.1;Parent=Thaps12008;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 133720 135579 . + . ID=Thaps12009;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG72];external_name=Thaps12009;logic_name=jgi_thaps3 chr23 ensembl transcript 133720 135579 . + . ID=Thaps12009;Parent=Thaps12009;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 133720 135579 . + 0 ID=Thaps12009;Parent=Thaps12009;rank=1 chr23 . exon 133720 135579 . + . ID=Thaps12009.1;Parent=Thaps12009;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 135866 139074 . + . ID=Thaps25829;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG73];external_name=Thaps25829;logic_name=jgi_thaps3 chr23 ensembl transcript 135866 139074 . + . ID=Thaps25829;Parent=Thaps25829;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 135866 137460 . + 0 ID=Thaps25829;Parent=Thaps25829;rank=1 chr23 . exon 135866 137460 . + . ID=Thaps25829.1;Parent=Thaps25829;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 137684 138287 . + 0 ID=Thaps25829;Parent=Thaps25829;rank=2 chr23 . exon 137684 138287 . + . ID=Thaps25829.2;Parent=Thaps25829;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 138385 139074 . + 0 ID=Thaps25829;Parent=Thaps25829;rank=3 chr23 . exon 138385 139074 . + . ID=Thaps25829.3;Parent=Thaps25829;constitutive=1;rank=3 chr23 ensembl protein_coding_gene 128761 129819 . - . ID=Thaps30747;biotype=protein_coding;description=Phosphatidate cytidylyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CG70];external_name=Thaps30747;logic_name=jgi_thaps3 chr23 ensembl transcript 128761 129819 . - . ID=Thaps30747;Parent=Thaps30747;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 128761 129313 . - 0 ID=Thaps30747;Parent=Thaps30747;rank=2 chr23 . exon 128761 129313 . - . ID=Thaps30747.2;Parent=Thaps30747;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 129485 129819 . - 0 ID=Thaps30747;Parent=Thaps30747;rank=1 chr23 . exon 129485 129819 . - . ID=Thaps30747.1;Parent=Thaps30747;constitutive=1;ensembl_end_phase=2;rank=1 chr23 ensembl protein_coding_gene 139337 140935 . - . ID=Thaps12011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG74];external_name=Thaps12011;logic_name=jgi_thaps3 chr23 ensembl transcript 139337 140935 . - . ID=Thaps12011;Parent=Thaps12011;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 139337 140935 . - 0 ID=Thaps12011;Parent=Thaps12011;rank=1 chr23 . exon 139337 140935 . - . ID=Thaps12011.1;Parent=Thaps12011;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 141748 142317 . - . ID=Thaps12012;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG76];external_name=Thaps12012;logic_name=jgi_thaps3 chr23 ensembl transcript 141748 142317 . - . ID=Thaps12012;Parent=Thaps12012;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 141748 142317 . - 0 ID=Thaps12012;Parent=Thaps12012;rank=1 chr23 . exon 141748 142317 . - . ID=Thaps12012.1;Parent=Thaps12012;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 142778 143211 . + . ID=Thaps12013;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG77];external_name=Thaps12013;logic_name=jgi_thaps3 chr23 ensembl transcript 142778 143211 . + . ID=Thaps12013;Parent=Thaps12013;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 142778 143078 . + 0 ID=Thaps12013;Parent=Thaps12013;rank=1 chr23 . exon 142778 143078 . + . ID=Thaps12013.1;Parent=Thaps12013;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 143123 143211 . + 0 ID=Thaps12013;Parent=Thaps12013;rank=2 chr23 . exon 143123 143211 . + . ID=Thaps12013.2;Parent=Thaps12013;constitutive=1;ensembl_end_phase=2;rank=2 chr23 ensembl protein_coding_gene 143617 144933 . + . ID=Thaps12014;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG78];external_name=Thaps12014;logic_name=jgi_thaps3 chr23 ensembl transcript 143617 144933 . + . ID=Thaps12014;Parent=Thaps12014;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 143617 144933 . + 0 ID=Thaps12014;Parent=Thaps12014;rank=1 chr23 . exon 143617 144933 . + . ID=Thaps12014.1;Parent=Thaps12014;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 145826 148245 . + . ID=Thaps270120;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CG79];external_name=Thaps270120;logic_name=jgi_thaps3 chr23 ensembl transcript 145826 148245 . + . ID=Thaps270120;Parent=Thaps270120;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 145826 146056 . + 0 ID=Thaps270120;Parent=Thaps270120;rank=1 chr23 . exon 145826 146056 . + . ID=Thaps270120.1;Parent=Thaps270120;constitutive=1;rank=1 chr23 . CDS 146168 146362 . + 0 ID=Thaps270120;Parent=Thaps270120;rank=2 chr23 . exon 146168 146362 . + . ID=Thaps270120.2;Parent=Thaps270120;constitutive=1;rank=2 chr23 . CDS 146448 146481 . + 0 ID=Thaps270120;Parent=Thaps270120;rank=3 chr23 . exon 146448 146481 . + . ID=Thaps270120.3;Parent=Thaps270120;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 146573 147108 . + 0 ID=Thaps270120;Parent=Thaps270120;rank=4 chr23 . exon 146573 147108 . + . ID=Thaps270120.4;Parent=Thaps270120;constitutive=1;ensembl_end_phase=2;rank=4 chr23 . CDS 147309 147634 . + 0 ID=Thaps270120;Parent=Thaps270120;rank=5 chr23 . exon 147309 147634 . + . ID=Thaps270120.5;Parent=Thaps270120;constitutive=1;ensembl_end_phase=2;rank=5 chr23 . CDS 147717 148245 . + 0 ID=Thaps270120;Parent=Thaps270120;rank=6 chr23 . exon 147717 148245 . + . ID=Thaps270120.6;Parent=Thaps270120;constitutive=1;ensembl_end_phase=1;rank=6 chr23 ensembl protein_coding_gene 141175 141483 . + . ID=Thaps38861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG75];external_name=Thaps38861;logic_name=jgi_thaps3 chr23 ensembl transcript 141175 141483 . + . ID=Thaps38861;Parent=Thaps38861;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 141175 141483 . + 0 ID=Thaps38861;Parent=Thaps38861;rank=1 chr23 . exon 141175 141483 . + . ID=Thaps38861.1;Parent=Thaps38861;constitutive=1;rank=1 chr23 . repeat_region 156701 156720 . ? . description=trf chr23 . repeat_region 156701 156720 . ? . description=dust chr23 ensembl protein_coding_gene 149323 149514 . + . ID=Thaps38788;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG80];external_name=Thaps38788;logic_name=jgi_thaps3 chr23 ensembl transcript 149323 149514 . + . ID=Thaps38788;Parent=Thaps38788;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 149323 149514 . + 0 ID=Thaps38788;Parent=Thaps38788;rank=1 chr23 . exon 149323 149514 . + . ID=Thaps38788.1;Parent=Thaps38788;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 159297 161805 . + . ID=Thaps25831;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG81];external_name=Thaps25831;logic_name=jgi_thaps3 chr23 ensembl transcript 159297 161805 . + . ID=Thaps25831;Parent=Thaps25831;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 159297 160061 . + 0 ID=Thaps25831;Parent=Thaps25831;rank=1 chr23 . exon 159297 160061 . + . ID=Thaps25831.1;Parent=Thaps25831;constitutive=1;rank=1 chr23 . CDS 160901 161701 . + 0 ID=Thaps25831;Parent=Thaps25831;rank=2 chr23 . exon 160901 161701 . + . ID=Thaps25831.2;Parent=Thaps25831;constitutive=1;rank=2 chr23 . CDS 161764 161805 . + 0 ID=Thaps25831;Parent=Thaps25831;rank=3 chr23 . exon 161764 161805 . + . ID=Thaps25831.3;Parent=Thaps25831;constitutive=1;rank=3 chr23 ensembl protein_coding_gene 166446 170866 . + . ID=Thaps264896;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CG83];external_name=Thaps264896;logic_name=jgi_thaps3 chr23 ensembl transcript 166446 170866 . + . ID=Thaps264896;Parent=Thaps264896;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 166446 166550 . + 0 ID=Thaps264896;Parent=Thaps264896;rank=1 chr23 . exon 166446 166550 . + . ID=Thaps264896.1;Parent=Thaps264896;constitutive=1;rank=1 chr23 . CDS 166587 166846 . + 0 ID=Thaps264896;Parent=Thaps264896;rank=2 chr23 . exon 166587 166846 . + . ID=Thaps264896.2;Parent=Thaps264896;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 166970 167609 . + 0 ID=Thaps264896;Parent=Thaps264896;rank=3 chr23 . exon 166970 167609 . + . ID=Thaps264896.3;Parent=Thaps264896;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 167805 167869 . + 0 ID=Thaps264896;Parent=Thaps264896;rank=4 chr23 . exon 167805 167869 . + . ID=Thaps264896.4;Parent=Thaps264896;constitutive=1;ensembl_end_phase=2;rank=4 chr23 . CDS 167913 167933 . + 0 ID=Thaps264896;Parent=Thaps264896;rank=5 chr23 . exon 167913 167933 . + . ID=Thaps264896.5;Parent=Thaps264896;constitutive=1;rank=5 chr23 . CDS 167993 169529 . + 0 ID=Thaps264896;Parent=Thaps264896;rank=6 chr23 . exon 167993 169529 . + . ID=Thaps264896.6;Parent=Thaps264896;constitutive=1;ensembl_end_phase=1;rank=6 chr23 . CDS 169607 169819 . + 0 ID=Thaps264896;Parent=Thaps264896;rank=7 chr23 . CDS 169904 170221 . + 0 ID=Thaps264896;Parent=Thaps264896;rank=8 chr23 . CDS 170309 170866 . + 0 ID=Thaps264896;Parent=Thaps264896;rank=9 chr23 ensembl protein_coding_gene 162493 163230 . - . ID=Thaps270121;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG82];external_name=Thaps270121;logic_name=jgi_thaps3 chr23 ensembl transcript 162493 163230 . - . ID=Thaps270121;Parent=Thaps270121;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 162493 163080 . - 0 ID=Thaps270121;Parent=Thaps270121;rank=2 chr23 . exon 162493 163080 . - . ID=Thaps270121.2;Parent=Thaps270121;constitutive=1;rank=2 chr23 . CDS 163138 163230 . - 0 ID=Thaps270121;Parent=Thaps270121;rank=1 chr23 . exon 163138 163230 . - . ID=Thaps270121.1;Parent=Thaps270121;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 174121 175182 . + . ID=Thaps12021;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG85];external_name=Thaps12021;logic_name=jgi_thaps3 chr23 ensembl transcript 174121 175182 . + . ID=Thaps12021;Parent=Thaps12021;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 174121 175182 . + 0 ID=Thaps12021;Parent=Thaps12021;rank=1 chr23 . exon 174121 175182 . + . ID=Thaps12021.1;Parent=Thaps12021;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 175248 176351 . - . ID=Thaps12022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG86];external_name=Thaps12022;logic_name=jgi_thaps3 chr23 ensembl transcript 175248 176351 . - . ID=Thaps12022;Parent=Thaps12022;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 175248 176351 . - 0 ID=Thaps12022;Parent=Thaps12022;rank=1 chr23 . exon 175248 176351 . - . ID=Thaps12022.1;Parent=Thaps12022;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 171267 173792 . - . ID=Thaps25833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG84];external_name=Thaps25833;logic_name=jgi_thaps3 chr23 ensembl transcript 171267 173792 . - . ID=Thaps25833;Parent=Thaps25833;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 171267 173792 . - 0 ID=Thaps25833;Parent=Thaps25833;rank=1 chr23 . exon 171267 173792 . - . ID=Thaps25833.1;Parent=Thaps25833;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 177299 179067 . + . ID=Thaps25834;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG87];external_name=Thaps25834;logic_name=jgi_thaps3 chr23 ensembl transcript 177299 179067 . + . ID=Thaps25834;Parent=Thaps25834;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 177299 178000 . + 0 ID=Thaps25834;Parent=Thaps25834;rank=1 chr23 . exon 177299 178000 . + . ID=Thaps25834.1;Parent=Thaps25834;constitutive=1;rank=1 chr23 . CDS 178083 178300 . + 0 ID=Thaps25834;Parent=Thaps25834;rank=2 chr23 . CDS 178386 179067 . + 0 ID=Thaps25834;Parent=Thaps25834;rank=3 chr23 . exon 169607 169819 . + . ID=Thaps264896.7;Parent=Thaps264896;constitutive=1;rank=7 chr23 . exon 169904 170221 . + . ID=Thaps264896.8;Parent=Thaps264896;constitutive=1;rank=8 chr23 . exon 170309 170866 . + . ID=Thaps264896.9;Parent=Thaps264896;constitutive=1;rank=9 chr23 ensembl protein_coding_gene 179157 180150 . - . ID=Thaps12024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG88];external_name=Thaps12024;logic_name=jgi_thaps3 chr23 ensembl transcript 179157 180150 . - . ID=Thaps12024;Parent=Thaps12024;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 179157 179964 . - 0 ID=Thaps12024;Parent=Thaps12024;rank=2 chr23 . exon 179157 179964 . - . ID=Thaps12024.2;Parent=Thaps12024;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 180050 180150 . - 0 ID=Thaps12024;Parent=Thaps12024;rank=1 chr23 . exon 180050 180150 . - . ID=Thaps12024.1;Parent=Thaps12024;constitutive=1;ensembl_end_phase=2;rank=1 chr23 ensembl protein_coding_gene 181129 183972 . - . ID=Thaps12025;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG89];external_name=Thaps12025;logic_name=jgi_thaps3 chr23 ensembl transcript 181129 183972 . - . ID=Thaps12025;Parent=Thaps12025;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 181129 181336 . - 0 ID=Thaps12025;Parent=Thaps12025;rank=6 chr23 . exon 181129 181336 . - . ID=Thaps12025.6;Parent=Thaps12025;constitutive=1;ensembl_end_phase=1;rank=6 chr23 . CDS 181410 181467 . - 0 ID=Thaps12025;Parent=Thaps12025;rank=5 chr23 . exon 181410 181467 . - . ID=Thaps12025.5;Parent=Thaps12025;constitutive=1;ensembl_end_phase=1;rank=5 chr23 . CDS 181543 181858 . - 0 ID=Thaps12025;Parent=Thaps12025;rank=4 chr23 . exon 181543 181858 . - . ID=Thaps12025.4;Parent=Thaps12025;constitutive=1;ensembl_end_phase=1;rank=4 chr23 . CDS 181937 182001 . - 0 ID=Thaps12025;Parent=Thaps12025;rank=3 chr23 . exon 181937 182001 . - . ID=Thaps12025.3;Parent=Thaps12025;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . CDS 182083 183757 . - 0 ID=Thaps12025;Parent=Thaps12025;rank=2 chr23 . exon 182083 183757 . - . ID=Thaps12025.2;Parent=Thaps12025;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 183838 183972 . - 0 ID=Thaps12025;Parent=Thaps12025;rank=1 chr23 . exon 183838 183972 . - . ID=Thaps12025.1;Parent=Thaps12025;constitutive=1;rank=1 chr23 . exon 178083 178300 . + . ID=Thaps25834.2;Parent=Thaps25834;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . exon 178386 179067 . + . ID=Thaps25834.3;Parent=Thaps25834;constitutive=1;ensembl_end_phase=1;rank=3 chr23 ensembl protein_coding_gene 185605 189364 . + . ID=Thaps38845;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CG90];external_name=Thaps38845;logic_name=jgi_thaps3 chr23 ensembl transcript 185605 189364 . + . ID=Thaps38845;Parent=Thaps38845;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 185605 186176 . + 0 ID=Thaps38845;Parent=Thaps38845;rank=1 chr23 . exon 185605 186176 . + . ID=Thaps38845.1;Parent=Thaps38845;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 186279 186421 . + 0 ID=Thaps38845;Parent=Thaps38845;rank=2 chr23 . exon 186279 186421 . + . ID=Thaps38845.2;Parent=Thaps38845;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 186470 187992 . + 0 ID=Thaps38845;Parent=Thaps38845;rank=3 chr23 . exon 186470 187992 . + . ID=Thaps38845.3;Parent=Thaps38845;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . CDS 188087 188286 . + 0 ID=Thaps38845;Parent=Thaps38845;rank=4 chr23 . CDS 188364 188700 . + 0 ID=Thaps38845;Parent=Thaps38845;rank=5 chr23 . CDS 188792 189364 . + 0 ID=Thaps38845;Parent=Thaps38845;rank=6 chr23 . repeat_region 190092 190497 . ? . description=trf chr23 . repeat_region 190092 190530 . ? . description=trf chr23 . repeat_region 190720 190727 . ? . description=dust chr23 ensembl protein_coding_gene 194741 197373 . + . ID=Thaps25837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG92];external_name=Thaps25837;logic_name=jgi_thaps3 chr23 ensembl transcript 194741 197373 . + . ID=Thaps25837;Parent=Thaps25837;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 194741 196018 . + 0 ID=Thaps25837;Parent=Thaps25837;rank=1 chr23 . exon 194741 196018 . + . ID=Thaps25837.1;Parent=Thaps25837;constitutive=1;rank=1 chr23 . CDS 196041 196111 . + 0 ID=Thaps25837;Parent=Thaps25837;rank=2 chr23 . exon 196041 196111 . + . ID=Thaps25837.2;Parent=Thaps25837;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 196246 196315 . + 0 ID=Thaps25837;Parent=Thaps25837;rank=3 chr23 . exon 196246 196315 . + . ID=Thaps25837.3;Parent=Thaps25837;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 196471 196605 . + 0 ID=Thaps25837;Parent=Thaps25837;rank=4 chr23 . exon 196471 196605 . + . ID=Thaps25837.4;Parent=Thaps25837;constitutive=1;rank=4 chr23 . CDS 196775 196972 . + 0 ID=Thaps25837;Parent=Thaps25837;rank=5 chr23 . exon 196775 196972 . + . ID=Thaps25837.5;Parent=Thaps25837;constitutive=1;rank=5 chr23 . CDS 197197 197373 . + 0 ID=Thaps25837;Parent=Thaps25837;rank=6 chr23 . exon 197197 197373 . + . ID=Thaps25837.6;Parent=Thaps25837;constitutive=1;rank=6 chr23 ensembl protein_coding_gene 192115 193023 . + . ID=Thaps38800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG91];external_name=Thaps38800;logic_name=jgi_thaps3 chr23 ensembl transcript 192115 193023 . + . ID=Thaps38800;Parent=Thaps38800;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 192115 192428 . + 0 ID=Thaps38800;Parent=Thaps38800;rank=1 chr23 . exon 192115 192428 . + . ID=Thaps38800.1;Parent=Thaps38800;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 192525 192762 . + 0 ID=Thaps38800;Parent=Thaps38800;rank=2 chr23 . exon 192525 192762 . + . ID=Thaps38800.2;Parent=Thaps38800;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 192835 193023 . + 0 ID=Thaps38800;Parent=Thaps38800;rank=3 chr23 . exon 192835 193023 . + . ID=Thaps38800.3;Parent=Thaps38800;constitutive=1;rank=3 chr23 . exon 188087 188286 . + . ID=Thaps38845.4;Parent=Thaps38845;constitutive=1;ensembl_end_phase=2;rank=4 chr23 . exon 188364 188700 . + . ID=Thaps38845.5;Parent=Thaps38845;constitutive=1;ensembl_end_phase=1;rank=5 chr23 . exon 188792 189364 . + . ID=Thaps38845.6;Parent=Thaps38845;constitutive=1;rank=6 chr23 ensembl protein_coding_gene 198538 199872 . + . ID=Thaps12030;biotype=protein_coding;description=Aspartate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CG93];external_name=Thaps12030;logic_name=jgi_thaps3 chr23 ensembl transcript 198538 199872 . + . ID=Thaps12030;Parent=Thaps12030;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 198538 199872 . + 0 ID=Thaps12030;Parent=Thaps12030;rank=1 chr23 . exon 198538 199872 . + . ID=Thaps12030.1;Parent=Thaps12030;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 200093 201208 . + . ID=Thaps12031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG94];external_name=Thaps12031;logic_name=jgi_thaps3 chr23 ensembl transcript 200093 201208 . + . ID=Thaps12031;Parent=Thaps12031;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 200093 201208 . + 0 ID=Thaps12031;Parent=Thaps12031;rank=1 chr23 . exon 200093 201208 . + . ID=Thaps12031.1;Parent=Thaps12031;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 203360 205286 . + . ID=Thaps25838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG95];external_name=Thaps25838;logic_name=jgi_thaps3 chr23 ensembl transcript 203360 205286 . + . ID=Thaps25838;Parent=Thaps25838;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 203360 203957 . + 0 ID=Thaps25838;Parent=Thaps25838;rank=1 chr23 . exon 203360 203957 . + . ID=Thaps25838.1;Parent=Thaps25838;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 204033 204577 . + 0 ID=Thaps25838;Parent=Thaps25838;rank=2 chr23 . exon 204033 204577 . + . ID=Thaps25838.2;Parent=Thaps25838;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 204657 205286 . + 0 ID=Thaps25838;Parent=Thaps25838;rank=3 chr23 . exon 204657 205286 . + . ID=Thaps25838.3;Parent=Thaps25838;constitutive=1;rank=3 chr23 ensembl protein_coding_gene 205752 207093 . - . ID=Thaps25839;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG96];external_name=Thaps25839;logic_name=jgi_thaps3 chr23 ensembl transcript 205752 207093 . - . ID=Thaps25839;Parent=Thaps25839;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 205752 206858 . - 0 ID=Thaps25839;Parent=Thaps25839;rank=2 chr23 . exon 205752 206858 . - . ID=Thaps25839.2;Parent=Thaps25839;constitutive=1;rank=2 chr23 . CDS 206974 207093 . - 0 ID=Thaps25839;Parent=Thaps25839;rank=1 chr23 . exon 206974 207093 . - . ID=Thaps25839.1;Parent=Thaps25839;constitutive=1;rank=1 chr23 . repeat_region 213078 213105 . ? . description=trf chr23 . repeat_region 213081 213107 . ? . description=trf chr23 ensembl protein_coding_gene 213453 216062 . + . ID=Thaps12037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA0];external_name=Thaps12037;logic_name=jgi_thaps3 chr23 ensembl transcript 213453 216062 . + . ID=Thaps12037;Parent=Thaps12037;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 213453 216062 . + 0 ID=Thaps12037;Parent=Thaps12037;rank=1 chr23 . exon 213453 216062 . + . ID=Thaps12037.1;Parent=Thaps12037;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 208608 209321 . - . ID=Thaps25840;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG97];external_name=Thaps25840;logic_name=jgi_thaps3 chr23 ensembl transcript 208608 209321 . - . ID=Thaps25840;Parent=Thaps25840;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 208608 209321 . - 0 ID=Thaps25840;Parent=Thaps25840;rank=1 chr23 . exon 208608 209321 . - . ID=Thaps25840.1;Parent=Thaps25840;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 216212 220809 . - . ID=Thaps25842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA1];external_name=Thaps25842;logic_name=jgi_thaps3 chr23 ensembl transcript 216212 220809 . - . ID=Thaps25842;Parent=Thaps25842;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 216212 217485 . - 0 ID=Thaps25842;Parent=Thaps25842;rank=4 chr23 . exon 216212 217485 . - . ID=Thaps25842.4;Parent=Thaps25842;constitutive=1;ensembl_end_phase=2;rank=4 chr23 . CDS 217783 218601 . - 0 ID=Thaps25842;Parent=Thaps25842;rank=3 chr23 . CDS 218698 219782 . - 0 ID=Thaps25842;Parent=Thaps25842;rank=2 chr23 . CDS 219896 220809 . - 0 ID=Thaps25842;Parent=Thaps25842;rank=1 chr23 ensembl protein_coding_gene 210089 210889 . + . ID=Thaps264899;biotype=protein_coding;external_name=Thaps264899;logic_name=jgi_thaps3 chr23 ensembl transcript 210089 210889 . + . ID=Thaps264899;Parent=Thaps264899;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 210089 210152 . + 0 ID=Thaps264899;Parent=Thaps264899;rank=1 chr23 . exon 210089 210152 . + . ID=Thaps264899.1;Parent=Thaps264899;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 210249 210296 . + 0 ID=Thaps264899;Parent=Thaps264899;rank=2 chr23 . exon 210249 210296 . + . ID=Thaps264899.2;Parent=Thaps264899;constitutive=1;rank=2 chr23 . CDS 210486 210889 . + 0 ID=Thaps264899;Parent=Thaps264899;rank=3 chr23 . exon 210486 210889 . + . ID=Thaps264899.3;Parent=Thaps264899;constitutive=1;ensembl_end_phase=2;rank=3 chr23 ensembl protein_coding_gene 211324 212877 . - . ID=Thaps264901;biotype=protein_coding;description=Protoporphyrinogen IX oxidase usually abbreviated [Source:UniProtKB/TrEMBL%3BAcc:B8CG99];external_name=PPX1;logic_name=jgi_thaps3 chr23 ensembl transcript 211324 212877 . - . ID=Thaps264901;Parent=Thaps264901;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 211324 211864 . - 0 ID=Thaps264901;Parent=Thaps264901;rank=3 chr23 . exon 211324 211864 . - . ID=Thaps264901.3;Parent=Thaps264901;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 211886 212508 . - 0 ID=Thaps264901;Parent=Thaps264901;rank=2 chr23 . exon 211886 212508 . - . ID=Thaps264901.2;Parent=Thaps264901;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 212536 212877 . - 0 ID=Thaps264901;Parent=Thaps264901;rank=1 chr23 . exon 212536 212877 . - . ID=Thaps264901.1;Parent=Thaps264901;constitutive=1;rank=1 chr23 . repeat_region 223701 223708 . ? . description=dust chr23 ensembl protein_coding_gene 223870 225480 . - . ID=Thaps12040;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA3];external_name=Thaps12040;logic_name=jgi_thaps3 chr23 ensembl transcript 223870 225480 . - . ID=Thaps12040;Parent=Thaps12040;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 223870 225480 . - 0 ID=Thaps12040;Parent=Thaps12040;rank=1 chr23 . exon 223870 225480 . - . ID=Thaps12040.1;Parent=Thaps12040;constitutive=1;rank=1 chr23 . exon 217783 218601 . - . ID=Thaps25842.3;Parent=Thaps25842;constitutive=1;rank=3 chr23 . exon 218698 219782 . - . ID=Thaps25842.2;Parent=Thaps25842;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . exon 219896 220809 . - . ID=Thaps25842.1;Parent=Thaps25842;constitutive=1;ensembl_end_phase=2;rank=1 chr23 ensembl protein_coding_gene 221437 223065 . + . ID=Thaps25843;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA2];external_name=Thaps25843;logic_name=jgi_thaps3 chr23 ensembl transcript 221437 223065 . + . ID=Thaps25843;Parent=Thaps25843;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 221437 223065 . + 0 ID=Thaps25843;Parent=Thaps25843;rank=1 chr23 . exon 221437 223065 . + . ID=Thaps25843.1;Parent=Thaps25843;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 225906 229048 . + . ID=Thaps25844;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA4];external_name=Thaps25844;logic_name=jgi_thaps3 chr23 ensembl transcript 225906 229048 . + . ID=Thaps25844;Parent=Thaps25844;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 225906 226395 . + 0 ID=Thaps25844;Parent=Thaps25844;rank=1 chr23 . exon 225906 226395 . + . ID=Thaps25844.1;Parent=Thaps25844;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 226488 227080 . + 0 ID=Thaps25844;Parent=Thaps25844;rank=2 chr23 . exon 226488 227080 . + . ID=Thaps25844.2;Parent=Thaps25844;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 227123 229048 . + 0 ID=Thaps25844;Parent=Thaps25844;rank=3 chr23 . exon 227123 229048 . + . ID=Thaps25844.3;Parent=Thaps25844;constitutive=1;rank=3 chr23 ensembl protein_coding_gene 234704 235630 . + . ID=Thaps12044;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA7];external_name=Thaps12044;logic_name=jgi_thaps3 chr23 ensembl transcript 234704 235630 . + . ID=Thaps12044;Parent=Thaps12044;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 234704 235630 . + 0 ID=Thaps12044;Parent=Thaps12044;rank=1 chr23 . exon 234704 235630 . + . ID=Thaps12044.1;Parent=Thaps12044;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 232365 234089 . - . ID=Thaps25846;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA6];external_name=Thaps25846;logic_name=jgi_thaps3 chr23 ensembl transcript 232365 234089 . - . ID=Thaps25846;Parent=Thaps25846;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 232365 233476 . - 0 ID=Thaps25846;Parent=Thaps25846;rank=3 chr23 . exon 232365 233476 . - . ID=Thaps25846.3;Parent=Thaps25846;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . CDS 233629 233821 . - 0 ID=Thaps25846;Parent=Thaps25846;rank=2 chr23 . exon 233629 233821 . - . ID=Thaps25846.2;Parent=Thaps25846;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 233928 234089 . - 0 ID=Thaps25846;Parent=Thaps25846;rank=1 chr23 . exon 233928 234089 . - . ID=Thaps25846.1;Parent=Thaps25846;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 236052 239248 . - . ID=Thaps25847;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA8];external_name=Thaps25847;logic_name=jgi_thaps3 chr23 ensembl transcript 236052 239248 . - . ID=Thaps25847;Parent=Thaps25847;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 236052 238131 . - 0 ID=Thaps25847;Parent=Thaps25847;rank=3 chr23 . exon 236052 238131 . - . ID=Thaps25847.3;Parent=Thaps25847;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 238245 238874 . - 0 ID=Thaps25847;Parent=Thaps25847;rank=2 chr23 . CDS 238965 239248 . - 0 ID=Thaps25847;Parent=Thaps25847;rank=1 chr23 ensembl protein_coding_gene 229973 232040 . - . ID=Thaps43120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA5];external_name=Thaps43120;logic_name=jgi_thaps3 chr23 ensembl transcript 229973 232040 . - . ID=Thaps43120;Parent=Thaps43120;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 229973 230921 . - 0 ID=Thaps43120;Parent=Thaps43120;rank=3 chr23 . exon 229973 230921 . - . ID=Thaps43120.3;Parent=Thaps43120;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 231023 231468 . - 0 ID=Thaps43120;Parent=Thaps43120;rank=2 chr23 . exon 231023 231468 . - . ID=Thaps43120.2;Parent=Thaps43120;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 231957 232040 . - 0 ID=Thaps43120;Parent=Thaps43120;rank=1 chr23 . exon 231957 232040 . - . ID=Thaps43120.1;Parent=Thaps43120;constitutive=1;rank=1 chr23 . repeat_region 244440 244459 . ? . description=trf chr23 ensembl protein_coding_gene 242306 243934 . - . ID=Thaps12047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGB0];external_name=Thaps12047;logic_name=jgi_thaps3 chr23 ensembl transcript 242306 243934 . - . ID=Thaps12047;Parent=Thaps12047;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 242306 243934 . - 0 ID=Thaps12047;Parent=Thaps12047;rank=1 chr23 . exon 242306 243934 . - . ID=Thaps12047.1;Parent=Thaps12047;constitutive=1;rank=1 chr23 . exon 238245 238874 . - . ID=Thaps25847.2;Parent=Thaps25847;constitutive=1;rank=2 chr23 . exon 238965 239248 . - . ID=Thaps25847.1;Parent=Thaps25847;constitutive=1;ensembl_end_phase=2;rank=1 chr23 ensembl protein_coding_gene 239892 241502 . + . ID=Thaps25848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGA9];external_name=Thaps25848;logic_name=jgi_thaps3 chr23 ensembl transcript 239892 241502 . + . ID=Thaps25848;Parent=Thaps25848;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 239892 241502 . + 0 ID=Thaps25848;Parent=Thaps25848;rank=1 chr23 . exon 239892 241502 . + . ID=Thaps25848.1;Parent=Thaps25848;constitutive=1;rank=1 chr23 . repeat_region 256336 256364 . ? . description=dust chr23 ensembl protein_coding_gene 250735 251886 . - . ID=Thaps12049;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGB4];external_name=Thaps12049;logic_name=jgi_thaps3 chr23 ensembl transcript 250735 251886 . - . ID=Thaps12049;Parent=Thaps12049;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 250735 251886 . - 0 ID=Thaps12049;Parent=Thaps12049;rank=1 chr23 . exon 250735 251886 . - . ID=Thaps12049.1;Parent=Thaps12049;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 252461 253738 . - . ID=Thaps12050;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGB5];external_name=Thaps12050;logic_name=jgi_thaps3 chr23 ensembl transcript 252461 253738 . - . ID=Thaps12050;Parent=Thaps12050;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 252461 253738 . - 0 ID=Thaps12050;Parent=Thaps12050;rank=1 chr23 . exon 252461 253738 . - . ID=Thaps12050.1;Parent=Thaps12050;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 256553 257992 . + . ID=Thaps12052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGB7];external_name=Thaps12052;logic_name=jgi_thaps3 chr23 ensembl transcript 256553 257992 . + . ID=Thaps12052;Parent=Thaps12052;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 256553 257992 . + 0 ID=Thaps12052;Parent=Thaps12052;rank=1 chr23 . exon 256553 257992 . + . ID=Thaps12052.1;Parent=Thaps12052;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 248147 248763 . + . ID=Thaps264902;biotype=protein_coding;description=Chitinase [Source:UniProtKB/TrEMBL%3BAcc:B8CGB1];external_name=CHT1;logic_name=jgi_thaps3 chr23 ensembl transcript 248147 248763 . + . ID=Thaps264902;Parent=Thaps264902;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 248147 248173 . + 0 ID=Thaps264902;Parent=Thaps264902;rank=1 chr23 . exon 248147 248173 . + . ID=Thaps264902.1;Parent=Thaps264902;constitutive=1;rank=1 chr23 . CDS 248290 248419 . + 0 ID=Thaps264902;Parent=Thaps264902;rank=2 chr23 . exon 248290 248419 . + . ID=Thaps264902.2;Parent=Thaps264902;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 248528 248763 . + 0 ID=Thaps264902;Parent=Thaps264902;rank=3 chr23 . exon 248528 248763 . + . ID=Thaps264902.3;Parent=Thaps264902;constitutive=1;ensembl_end_phase=2;rank=3 chr23 ensembl protein_coding_gene 248895 250000 . + . ID=Thaps264903;biotype=protein_coding;description=Chitinase [Source:UniProtKB/TrEMBL%3BAcc:B8CGB2];external_name=CHT1_1;logic_name=jgi_thaps3 chr23 ensembl transcript 248895 250000 . + . ID=Thaps264903;Parent=Thaps264903;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 248895 249240 . + 0 ID=Thaps264903;Parent=Thaps264903;rank=1 chr23 . exon 248895 249240 . + . ID=Thaps264903.1;Parent=Thaps264903;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 249347 250000 . + 0 ID=Thaps264903;Parent=Thaps264903;rank=2 chr23 . exon 249347 250000 . + . ID=Thaps264903.2;Parent=Thaps264903;constitutive=1;rank=2 chr23 ensembl protein_coding_gene 254179 255987 . + . ID=Thaps264905;biotype=protein_coding;description=Nadp-reducing hydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8CGB6];external_name=Thaps264905;logic_name=jgi_thaps3 chr23 ensembl transcript 254179 255987 . + . ID=Thaps264905;Parent=Thaps264905;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 254179 255567 . + 0 ID=Thaps264905;Parent=Thaps264905;rank=1 chr23 . exon 254179 255567 . + . ID=Thaps264905.1;Parent=Thaps264905;constitutive=1;rank=1 chr23 . CDS 255622 255987 . + 0 ID=Thaps264905;Parent=Thaps264905;rank=2 chr23 . exon 255622 255987 . + . ID=Thaps264905.2;Parent=Thaps264905;constitutive=1;rank=2 chr23 ensembl protein_coding_gene 249976 250662 . + . ID=Thaps270127;biotype=protein_coding;description=Chitinase [Source:UniProtKB/TrEMBL%3BAcc:B8CGB3];external_name=CHT1_2;logic_name=jgi_thaps3 chr23 ensembl transcript 249976 250662 . + . ID=Thaps270127;Parent=Thaps270127;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 249976 250266 . + 0 ID=Thaps270127;Parent=Thaps270127;rank=1 chr23 . exon 249976 250266 . + . ID=Thaps270127.1;Parent=Thaps270127;constitutive=1;rank=1 chr23 . CDS 250357 250662 . + 0 ID=Thaps270127;Parent=Thaps270127;rank=2 chr23 . exon 250357 250662 . + . ID=Thaps270127.2;Parent=Thaps270127;constitutive=1;rank=2 chr23 ensembl protein_coding_gene 258094 259554 . - . ID=Thaps12053;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGB8];external_name=Thaps12053;logic_name=jgi_thaps3 chr23 ensembl transcript 258094 259554 . - . ID=Thaps12053;Parent=Thaps12053;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 258094 259554 . - 0 ID=Thaps12053;Parent=Thaps12053;rank=1 chr23 . exon 258094 259554 . - . ID=Thaps12053.1;Parent=Thaps12053;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 262241 263165 . - . ID=Thaps12055;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGC0];external_name=Thaps12055;logic_name=jgi_thaps3 chr23 ensembl transcript 262241 263165 . - . ID=Thaps12055;Parent=Thaps12055;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 262241 262436 . - 0 ID=Thaps12055;Parent=Thaps12055;rank=3 chr23 . exon 262241 262436 . - . ID=Thaps12055.3;Parent=Thaps12055;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 262459 262808 . - 0 ID=Thaps12055;Parent=Thaps12055;rank=2 chr23 . exon 262459 262808 . - . ID=Thaps12055.2;Parent=Thaps12055;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 262932 263165 . - 0 ID=Thaps12055;Parent=Thaps12055;rank=1 chr23 . exon 262932 263165 . - . ID=Thaps12055.1;Parent=Thaps12055;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 264378 265988 . - . ID=Thaps13485;biotype=protein_coding;description=Xanthine uracil permease [Source:UniProtKB/TrEMBL%3BAcc:B8CGC1];external_name=Thaps13485;logic_name=jgi_thaps3 chr23 ensembl transcript 264378 265988 . - . ID=Thaps13485;Parent=Thaps13485;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 264378 264964 . - 0 ID=Thaps13485;Parent=Thaps13485;rank=2 chr23 . exon 264378 264964 . - . ID=Thaps13485.2;Parent=Thaps13485;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 265052 265988 . - 0 ID=Thaps13485;Parent=Thaps13485;rank=1 chr23 . exon 265052 265988 . - . ID=Thaps13485.1;Parent=Thaps13485;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 266976 268454 . + . ID=Thaps25852;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGC2];external_name=Thaps25852;logic_name=jgi_thaps3 chr23 ensembl transcript 266976 268454 . + . ID=Thaps25852;Parent=Thaps25852;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 266976 268454 . + 0 ID=Thaps25852;Parent=Thaps25852;rank=1 chr23 . exon 266976 268454 . + . ID=Thaps25852.1;Parent=Thaps25852;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 260249 261557 . + . ID=Thaps38775;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGB9];external_name=Thaps38775;logic_name=jgi_thaps3 chr23 ensembl transcript 260249 261557 . + . ID=Thaps38775;Parent=Thaps38775;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 260249 260535 . + 0 ID=Thaps38775;Parent=Thaps38775;rank=1 chr23 . exon 260249 260535 . + . ID=Thaps38775.1;Parent=Thaps38775;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 260633 260688 . + 0 ID=Thaps38775;Parent=Thaps38775;rank=2 chr23 . exon 260633 260688 . + . ID=Thaps38775.2;Parent=Thaps38775;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 260803 261557 . + 0 ID=Thaps38775;Parent=Thaps38775;rank=3 chr23 . exon 260803 261557 . + . ID=Thaps38775.3;Parent=Thaps38775;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . repeat_region 268795 268832 . ? . description=dust chr23 . repeat_region 269547 269570 . ? . description=trf chr23 . repeat_region 269547 269570 . ? . description=dust chr23 ensembl protein_coding_gene 268494 270674 . - . ID=Thaps25853;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGC3];external_name=Thaps25853;logic_name=jgi_thaps3 chr23 ensembl transcript 268494 270674 . - . ID=Thaps25853;Parent=Thaps25853;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 268494 270674 . - 0 ID=Thaps25853;Parent=Thaps25853;rank=1 chr23 . exon 268494 270674 . - . ID=Thaps25853.1;Parent=Thaps25853;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 271639 275793 . + . ID=Thaps25854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGC4];external_name=Thaps25854;logic_name=jgi_thaps3 chr23 ensembl transcript 271639 275793 . + . ID=Thaps25854;Parent=Thaps25854;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 271639 272887 . + 0 ID=Thaps25854;Parent=Thaps25854;rank=1 chr23 . exon 271639 272887 . + . ID=Thaps25854.1;Parent=Thaps25854;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 272932 273222 . + 0 ID=Thaps25854;Parent=Thaps25854;rank=2 chr23 . exon 272932 273222 . + . ID=Thaps25854.2;Parent=Thaps25854;constitutive=1;rank=2 chr23 . CDS 273298 273530 . + 0 ID=Thaps25854;Parent=Thaps25854;rank=3 chr23 . exon 273298 273530 . + . ID=Thaps25854.3;Parent=Thaps25854;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . CDS 273623 274057 . + 0 ID=Thaps25854;Parent=Thaps25854;rank=4 chr23 . exon 273623 274057 . + . ID=Thaps25854.4;Parent=Thaps25854;constitutive=1;rank=4 chr23 . CDS 274142 275076 . + 0 ID=Thaps25854;Parent=Thaps25854;rank=5 chr23 . exon 274142 275076 . + . ID=Thaps25854.5;Parent=Thaps25854;constitutive=1;ensembl_end_phase=2;rank=5 chr23 . CDS 275158 275315 . + 0 ID=Thaps25854;Parent=Thaps25854;rank=6 chr23 . exon 275158 275315 . + . ID=Thaps25854.6;Parent=Thaps25854;constitutive=1;ensembl_end_phase=2;rank=6 chr23 . CDS 275402 275793 . + 0 ID=Thaps25854;Parent=Thaps25854;rank=7 chr23 . exon 275402 275793 . + . ID=Thaps25854.7;Parent=Thaps25854;constitutive=1;ensembl_end_phase=2;rank=7 chr23 ensembl gene 276282 277371 . - . ID=Thaps264907;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr23 ensembl transcript 276282 277371 . - . ID=Thaps264907;Parent=Thaps264907;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr23 . exon 276282 277371 . - . ID=Thaps264907.1;Parent=Thaps264907;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 278704 281050 . + . ID=Thaps12061;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGC5];external_name=Thaps12061;logic_name=jgi_thaps3 chr23 ensembl transcript 278704 281050 . + . ID=Thaps12061;Parent=Thaps12061;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 278704 279513 . + 0 ID=Thaps12061;Parent=Thaps12061;rank=1 chr23 . exon 278704 279513 . + . ID=Thaps12061.1;Parent=Thaps12061;constitutive=1;rank=1 chr23 . CDS 279705 279784 . + 0 ID=Thaps12061;Parent=Thaps12061;rank=2 chr23 . exon 279705 279784 . + . ID=Thaps12061.2;Parent=Thaps12061;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 279867 280746 . + 0 ID=Thaps12061;Parent=Thaps12061;rank=3 chr23 . exon 279867 280746 . + . ID=Thaps12061.3;Parent=Thaps12061;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 280850 281050 . + 0 ID=Thaps12061;Parent=Thaps12061;rank=4 chr23 . exon 280850 281050 . + . ID=Thaps12061.4;Parent=Thaps12061;constitutive=1;rank=4 chr23 ensembl protein_coding_gene 283195 283689 . - . ID=Thaps12063;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGC7];external_name=Thaps12063;logic_name=jgi_thaps3 chr23 ensembl transcript 283195 283689 . - . ID=Thaps12063;Parent=Thaps12063;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 283195 283689 . - 0 ID=Thaps12063;Parent=Thaps12063;rank=1 chr23 . exon 283195 283689 . - . ID=Thaps12063.1;Parent=Thaps12063;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 286452 288327 . - . ID=Thaps12066;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGD0];external_name=Thaps12066;logic_name=jgi_thaps3 chr23 ensembl transcript 286452 288327 . - . ID=Thaps12066;Parent=Thaps12066;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 286452 287708 . - 0 ID=Thaps12066;Parent=Thaps12066;rank=3 chr23 . exon 286452 287708 . - . ID=Thaps12066.3;Parent=Thaps12066;constitutive=1;rank=3 chr23 . CDS 287807 287943 . - 0 ID=Thaps12066;Parent=Thaps12066;rank=2 chr23 . CDS 288024 288327 . - 0 ID=Thaps12066;Parent=Thaps12066;rank=1 chr23 ensembl protein_coding_gene 285661 286290 . + . ID=Thaps18351;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGC9];external_name=Thaps18351;logic_name=jgi_thaps3 chr23 ensembl transcript 285661 286290 . + . ID=Thaps18351;Parent=Thaps18351;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 285661 286290 . + 0 ID=Thaps18351;Parent=Thaps18351;rank=1 chr23 . exon 285661 286290 . + . ID=Thaps18351.1;Parent=Thaps18351;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 281131 282069 . - . ID=Thaps38770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGC6];external_name=Thaps38770;logic_name=jgi_thaps3 chr23 ensembl transcript 281131 282069 . - . ID=Thaps38770;Parent=Thaps38770;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 281131 282069 . - 0 ID=Thaps38770;Parent=Thaps38770;rank=1 chr23 . exon 281131 282069 . - . ID=Thaps38770.1;Parent=Thaps38770;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 284217 284678 . + . ID=Thaps38815;biotype=protein_coding;description=RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8CGC8];external_name=RPB8;logic_name=jgi_thaps3 chr23 ensembl transcript 284217 284678 . + . ID=Thaps38815;Parent=Thaps38815;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 284217 284678 . + 0 ID=Thaps38815;Parent=Thaps38815;rank=1 chr23 . exon 284217 284678 . + . ID=Thaps38815.1;Parent=Thaps38815;constitutive=1;rank=1 chr23 . exon 287807 287943 . - . ID=Thaps12066.2;Parent=Thaps12066;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . exon 288024 288327 . - . ID=Thaps12066.1;Parent=Thaps12066;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 295638 296391 . - . ID=Thaps12070;biotype=protein_coding;description=Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8CGD4];external_name=NDK1;logic_name=jgi_thaps3 chr23 ensembl transcript 295638 296391 . - . ID=Thaps12070;Parent=Thaps12070;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 295638 295702 . - 0 ID=Thaps12070;Parent=Thaps12070;rank=3 chr23 . exon 295638 295702 . - . ID=Thaps12070.3;Parent=Thaps12070;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . CDS 295806 296177 . - 0 ID=Thaps12070;Parent=Thaps12070;rank=2 chr23 . exon 295806 296177 . - . ID=Thaps12070.2;Parent=Thaps12070;constitutive=1;rank=2 chr23 . CDS 296379 296391 . - 0 ID=Thaps12070;Parent=Thaps12070;rank=1 chr23 . exon 296379 296391 . - . ID=Thaps12070.1;Parent=Thaps12070;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 294315 294509 . + . ID=Thaps18536;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGD3];external_name=FCP_1;logic_name=jgi_thaps3 chr23 ensembl transcript 294315 294509 . + . ID=Thaps18536;Parent=Thaps18536;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 294315 294509 . + 0 ID=Thaps18536;Parent=Thaps18536;rank=1 chr23 . exon 294315 294509 . + . ID=Thaps18536.1;Parent=Thaps18536;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 288818 290458 . - . ID=Thaps25857;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGD1];external_name=Thaps25857;logic_name=jgi_thaps3 chr23 ensembl transcript 288818 290458 . - . ID=Thaps25857;Parent=Thaps25857;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 288818 288903 . - 0 ID=Thaps25857;Parent=Thaps25857;rank=2 chr23 . exon 288818 288903 . - . ID=Thaps25857.2;Parent=Thaps25857;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 289132 290458 . - 0 ID=Thaps25857;Parent=Thaps25857;rank=1 chr23 . exon 289132 290458 . - . ID=Thaps25857.1;Parent=Thaps25857;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 291950 293020 . - . ID=Thaps43128;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGD2];external_name=Thaps43128;logic_name=jgi_thaps3 chr23 ensembl transcript 291950 293020 . - . ID=Thaps43128;Parent=Thaps43128;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 291950 293020 . - 0 ID=Thaps43128;Parent=Thaps43128;rank=1 chr23 . exon 291950 293020 . - . ID=Thaps43128.1;Parent=Thaps43128;constitutive=1;rank=1 chr23 . repeat_region 297263 297293 . ? . description=dust chr23 . repeat_region 299424 299445 . ? . description=trf chr23 . repeat_region 299424 299445 . ? . description=dust chr23 . repeat_region 299477 299485 . ? . description=dust chr23 . repeat_region 301316 301350 . ? . description=trf chr23 . repeat_region 301316 301350 . ? . description=dust chr23 . repeat_region 301862 301870 . ? . description=dust chr23 . repeat_region 301872 301916 . ? . description=trf chr23 . repeat_region 301884 301922 . ? . description=dust chr23 . repeat_region 302912 302950 . ? . description=dust chr23 . repeat_region 302923 302950 . ? . description=trf chr23 . repeat_region 305055 305083 . ? . description=trf chr23 . repeat_region 305055 305083 . ? . description=dust chr23 ensembl protein_coding_gene 299549 300001 . + . ID=Thaps12072;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGD6];external_name=Thaps12072;logic_name=jgi_thaps3 chr23 ensembl transcript 299549 300001 . + . ID=Thaps12072;Parent=Thaps12072;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 299549 300001 . + 0 ID=Thaps12072;Parent=Thaps12072;rank=1 chr23 . exon 299549 300001 . + . ID=Thaps12072.1;Parent=Thaps12072;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 305165 306058 . - . ID=Thaps12074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGD8];external_name=Thaps12074;logic_name=jgi_thaps3 chr23 ensembl transcript 305165 306058 . - . ID=Thaps12074;Parent=Thaps12074;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 305165 306058 . - 0 ID=Thaps12074;Parent=Thaps12074;rank=1 chr23 . exon 305165 306058 . - . ID=Thaps12074.1;Parent=Thaps12074;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 301941 303966 . + . ID=Thaps25860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGD7];external_name=Thaps25860;logic_name=jgi_thaps3 chr23 ensembl transcript 301941 303966 . + . ID=Thaps25860;Parent=Thaps25860;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 301941 302976 . + 0 ID=Thaps25860;Parent=Thaps25860;rank=1 chr23 . exon 301941 302976 . + . ID=Thaps25860.1;Parent=Thaps25860;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 303011 303966 . + 0 ID=Thaps25860;Parent=Thaps25860;rank=2 chr23 . exon 303011 303966 . + . ID=Thaps25860.2;Parent=Thaps25860;constitutive=1;ensembl_end_phase=2;rank=2 chr23 ensembl protein_coding_gene 297501 298888 . - . ID=Thaps264915;biotype=protein_coding;description=Aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CGD5];external_name=Thaps264915;logic_name=jgi_thaps3 chr23 ensembl transcript 297501 298888 . - . ID=Thaps264915;Parent=Thaps264915;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 297501 298074 . - 0 ID=Thaps264915;Parent=Thaps264915;rank=3 chr23 . exon 297501 298074 . - . ID=Thaps264915.3;Parent=Thaps264915;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 298126 298332 . - 0 ID=Thaps264915;Parent=Thaps264915;rank=2 chr23 . exon 298126 298332 . - . ID=Thaps264915.2;Parent=Thaps264915;constitutive=1;rank=2 chr23 . CDS 298435 298888 . - 0 ID=Thaps264915;Parent=Thaps264915;rank=1 chr23 . exon 298435 298888 . - . ID=Thaps264915.1;Parent=Thaps264915;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 306879 310679 . + . ID=Thaps12075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGD9];external_name=Thaps12075;logic_name=jgi_thaps3 chr23 ensembl transcript 306879 310679 . + . ID=Thaps12075;Parent=Thaps12075;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 306879 307466 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=1 chr23 . exon 306879 307466 . + . ID=Thaps12075.1;Parent=Thaps12075;constitutive=1;rank=1 chr23 . CDS 307557 307817 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=2 chr23 . exon 307557 307817 . + . ID=Thaps12075.2;Parent=Thaps12075;constitutive=1;rank=2 chr23 . CDS 308077 308338 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=3 chr23 . exon 308077 308338 . + . ID=Thaps12075.3;Parent=Thaps12075;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 308415 308522 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=4 chr23 . exon 308415 308522 . + . ID=Thaps12075.4;Parent=Thaps12075;constitutive=1;rank=4 chr23 . CDS 308614 309075 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=5 chr23 . exon 308614 309075 . + . ID=Thaps12075.5;Parent=Thaps12075;constitutive=1;rank=5 chr23 . CDS 309159 309428 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=6 chr23 . exon 309159 309428 . + . ID=Thaps12075.6;Parent=Thaps12075;constitutive=1;rank=6 chr23 . CDS 309478 309704 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=7 chr23 . exon 309478 309704 . + . ID=Thaps12075.7;Parent=Thaps12075;constitutive=1;ensembl_end_phase=2;rank=7 chr23 . CDS 309914 309991 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=8 chr23 . exon 309914 309991 . + . ID=Thaps12075.8;Parent=Thaps12075;constitutive=1;rank=8 chr23 . CDS 310082 310132 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=9 chr23 . exon 310082 310132 . + . ID=Thaps12075.9;Parent=Thaps12075;constitutive=1;rank=9 chr23 . CDS 310223 310318 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=10 chr23 . exon 310223 310318 . + . ID=Thaps12075.10;Parent=Thaps12075;constitutive=1;rank=10 chr23 . CDS 310410 310526 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=11 chr23 . exon 310410 310526 . + . ID=Thaps12075.11;Parent=Thaps12075;constitutive=1;rank=11 chr23 . CDS 310659 310679 . + 0 ID=Thaps12075;Parent=Thaps12075;rank=12 chr23 . exon 310659 310679 . + . ID=Thaps12075.12;Parent=Thaps12075;constitutive=1;rank=12 chr23 ensembl protein_coding_gene 310896 313379 . - . ID=Thaps12076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGE0];external_name=Thaps12076;logic_name=jgi_thaps3 chr23 ensembl transcript 310896 313379 . - . ID=Thaps12076;Parent=Thaps12076;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 310896 313379 . - 0 ID=Thaps12076;Parent=Thaps12076;rank=1 chr23 . exon 310896 313379 . - . ID=Thaps12076.1;Parent=Thaps12076;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 316502 320720 . + . ID=Thaps12078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGE2];external_name=Thaps12078;logic_name=jgi_thaps3 chr23 ensembl transcript 316502 320720 . + . ID=Thaps12078;Parent=Thaps12078;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 316502 318039 . + 0 ID=Thaps12078;Parent=Thaps12078;rank=1 chr23 . exon 316502 318039 . + . ID=Thaps12078.1;Parent=Thaps12078;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 318127 320632 . + 0 ID=Thaps12078;Parent=Thaps12078;rank=2 chr23 . CDS 320682 320720 . + 0 ID=Thaps12078;Parent=Thaps12078;rank=3 chr23 ensembl protein_coding_gene 314256 315233 . - . ID=Thaps25861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGE1];external_name=Thaps25861;logic_name=jgi_thaps3 chr23 ensembl transcript 314256 315233 . - . ID=Thaps25861;Parent=Thaps25861;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 314256 315233 . - 0 ID=Thaps25861;Parent=Thaps25861;rank=1 chr23 . exon 314256 315233 . - . ID=Thaps25861.1;Parent=Thaps25861;constitutive=1;rank=1 chr23 . repeat_region 320783 322020 . + . description=scaffold_32_80_4_242182_244563 chr23 . repeat_region 322852 322910 . ? . description=dust chr23 . repeat_region 322887 322910 . ? . description=trf chr23 . repeat_region 323092 323117 . ? . description=trf chr23 . repeat_region 323092 323117 . ? . description=dust chr23 . repeat_region 323245 323287 . ? . description=trf chr23 . repeat_region 323245 323287 . ? . description=trf chr23 . repeat_region 323245 323287 . ? . description=dust chr23 . repeat_region 324609 324630 . ? . description=trf chr23 . repeat_region 324609 324630 . ? . description=dust chr23 . exon 318127 320632 . + . ID=Thaps12078.2;Parent=Thaps12078;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . exon 320682 320720 . + . ID=Thaps12078.3;Parent=Thaps12078;constitutive=1;rank=3 chr23 ensembl protein_coding_gene 322539 325211 . - . ID=Thaps12079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGE3];external_name=Thaps12079;logic_name=jgi_thaps3 chr23 ensembl transcript 322539 325211 . - . ID=Thaps12079;Parent=Thaps12079;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 322539 325211 . - 0 ID=Thaps12079;Parent=Thaps12079;rank=1 chr23 . exon 322539 325211 . - . ID=Thaps12079.1;Parent=Thaps12079;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 326351 328024 . + . ID=Thaps264918;biotype=protein_coding;description=Amino acid transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CGE4];external_name=Thaps264918;logic_name=jgi_thaps3 chr23 ensembl transcript 326351 328024 . + . ID=Thaps264918;Parent=Thaps264918;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 326351 326885 . + 0 ID=Thaps264918;Parent=Thaps264918;rank=1 chr23 . exon 326351 326885 . + . ID=Thaps264918.1;Parent=Thaps264918;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 326943 327443 . + 0 ID=Thaps264918;Parent=Thaps264918;rank=2 chr23 . CDS 327495 327675 . + 0 ID=Thaps264918;Parent=Thaps264918;rank=3 chr23 . CDS 327736 328024 . + 0 ID=Thaps264918;Parent=Thaps264918;rank=4 chr23 ensembl protein_coding_gene 336054 339447 . - . ID=Thaps12084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGE8];external_name=Thaps12084;logic_name=jgi_thaps3 chr23 ensembl transcript 336054 339447 . - . ID=Thaps12084;Parent=Thaps12084;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 336054 336079 . - 0 ID=Thaps12084;Parent=Thaps12084;rank=6 chr23 . exon 336054 336079 . - . ID=Thaps12084.6;Parent=Thaps12084;constitutive=1;ensembl_end_phase=2;rank=6 chr23 . CDS 336220 336703 . - 0 ID=Thaps12084;Parent=Thaps12084;rank=5 chr23 . exon 336220 336703 . - . ID=Thaps12084.5;Parent=Thaps12084;constitutive=1;ensembl_end_phase=1;rank=5 chr23 . CDS 336796 336867 . - 0 ID=Thaps12084;Parent=Thaps12084;rank=4 chr23 . CDS 336949 337235 . - 0 ID=Thaps12084;Parent=Thaps12084;rank=3 chr23 . CDS 337334 339236 . - 0 ID=Thaps12084;Parent=Thaps12084;rank=2 chr23 . CDS 339370 339447 . - 0 ID=Thaps12084;Parent=Thaps12084;rank=1 chr23 ensembl protein_coding_gene 329160 329941 . + . ID=Thaps17492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGE5];external_name=Thaps17492;logic_name=jgi_thaps3 chr23 ensembl transcript 329160 329941 . + . ID=Thaps17492;Parent=Thaps17492;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 329160 329411 . + 0 ID=Thaps17492;Parent=Thaps17492;rank=1 chr23 . exon 329160 329411 . + . ID=Thaps17492.1;Parent=Thaps17492;constitutive=1;rank=1 chr23 . CDS 329492 329941 . + 0 ID=Thaps17492;Parent=Thaps17492;rank=2 chr23 . exon 329492 329941 . + . ID=Thaps17492.2;Parent=Thaps17492;constitutive=1;rank=2 chr23 ensembl protein_coding_gene 333329 334220 . + . ID=Thaps17651;biotype=protein_coding;description=Phosphoglycerate mutase [Source:UniProtKB/TrEMBL%3BAcc:B8CGE7];external_name=Thaps17651;logic_name=jgi_thaps3 chr23 ensembl transcript 333329 334220 . + . ID=Thaps17651;Parent=Thaps17651;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 333329 333555 . + 0 ID=Thaps17651;Parent=Thaps17651;rank=1 chr23 . exon 333329 333555 . + . ID=Thaps17651.1;Parent=Thaps17651;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 333663 333706 . + 0 ID=Thaps17651;Parent=Thaps17651;rank=2 chr23 . exon 333663 333706 . + . ID=Thaps17651.2;Parent=Thaps17651;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 333808 334220 . + 0 ID=Thaps17651;Parent=Thaps17651;rank=3 chr23 . exon 333808 334220 . + . ID=Thaps17651.3;Parent=Thaps17651;constitutive=1;ensembl_end_phase=2;rank=3 chr23 ensembl protein_coding_gene 330300 332109 . - . ID=Thaps25864;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGE6];external_name=Thaps25864;logic_name=jgi_thaps3 chr23 ensembl transcript 330300 332109 . - . ID=Thaps25864;Parent=Thaps25864;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 330300 330820 . - 0 ID=Thaps25864;Parent=Thaps25864;rank=4 chr23 . exon 330300 330820 . - . ID=Thaps25864.4;Parent=Thaps25864;constitutive=1;ensembl_end_phase=2;rank=4 chr23 . CDS 331034 331447 . - 0 ID=Thaps25864;Parent=Thaps25864;rank=3 chr23 . exon 331034 331447 . - . ID=Thaps25864.3;Parent=Thaps25864;constitutive=1;rank=3 chr23 . CDS 331530 331855 . - 0 ID=Thaps25864;Parent=Thaps25864;rank=2 chr23 . exon 331530 331855 . - . ID=Thaps25864.2;Parent=Thaps25864;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 331943 332109 . - 0 ID=Thaps25864;Parent=Thaps25864;rank=1 chr23 . exon 331943 332109 . - . ID=Thaps25864.1;Parent=Thaps25864;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . exon 326943 327443 . + . ID=Thaps264918.2;Parent=Thaps264918;constitutive=1;rank=2 chr23 . exon 327495 327675 . + . ID=Thaps264918.3;Parent=Thaps264918;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . exon 327736 328024 . + . ID=Thaps264918.4;Parent=Thaps264918;constitutive=1;ensembl_end_phase=1;rank=4 chr23 . repeat_region 336906 336938 . ? . description=trf chr23 . repeat_region 338028 338052 . ? . description=trf chr23 . repeat_region 338028 338052 . ? . description=dust chr23 . repeat_region 339384 339408 . ? . description=trf chr23 . repeat_region 344306 344319 . ? . description=dust chr23 . exon 336796 336867 . - . ID=Thaps12084.4;Parent=Thaps12084;constitutive=1;rank=4 chr23 . exon 336949 337235 . - . ID=Thaps12084.3;Parent=Thaps12084;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . exon 337334 339236 . - . ID=Thaps12084.2;Parent=Thaps12084;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . exon 339370 339447 . - . ID=Thaps12084.1;Parent=Thaps12084;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 339608 342102 . + . ID=Thaps12085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGE9];external_name=Thaps12085;logic_name=jgi_thaps3 chr23 ensembl transcript 339608 342102 . + . ID=Thaps12085;Parent=Thaps12085;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 339608 340109 . + 0 ID=Thaps12085;Parent=Thaps12085;rank=1 chr23 . exon 339608 340109 . + . ID=Thaps12085.1;Parent=Thaps12085;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 340139 340192 . + 0 ID=Thaps12085;Parent=Thaps12085;rank=2 chr23 . exon 340139 340192 . + . ID=Thaps12085.2;Parent=Thaps12085;constitutive=1;rank=2 chr23 . CDS 340228 341344 . + 0 ID=Thaps12085;Parent=Thaps12085;rank=3 chr23 . exon 340228 341344 . + . ID=Thaps12085.3;Parent=Thaps12085;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 341585 341651 . + 0 ID=Thaps12085;Parent=Thaps12085;rank=4 chr23 . exon 341585 341651 . + . ID=Thaps12085.4;Parent=Thaps12085;constitutive=1;ensembl_end_phase=1;rank=4 chr23 . CDS 341680 342102 . + 0 ID=Thaps12085;Parent=Thaps12085;rank=5 chr23 . exon 341680 342102 . + . ID=Thaps12085.5;Parent=Thaps12085;constitutive=1;rank=5 chr23 ensembl protein_coding_gene 344730 345779 . + . ID=Thaps12087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF1];external_name=Thaps12087;logic_name=jgi_thaps3 chr23 ensembl transcript 344730 345779 . + . ID=Thaps12087;Parent=Thaps12087;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 344730 344783 . + 0 ID=Thaps12087;Parent=Thaps12087;rank=1 chr23 . exon 344730 344783 . + . ID=Thaps12087.1;Parent=Thaps12087;constitutive=1;rank=1 chr23 . CDS 345052 345145 . + 0 ID=Thaps12087;Parent=Thaps12087;rank=2 chr23 . exon 345052 345145 . + . ID=Thaps12087.2;Parent=Thaps12087;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 345253 345487 . + 0 ID=Thaps12087;Parent=Thaps12087;rank=3 chr23 . exon 345253 345487 . + . ID=Thaps12087.3;Parent=Thaps12087;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 345593 345779 . + 0 ID=Thaps12087;Parent=Thaps12087;rank=4 chr23 . exon 345593 345779 . + . ID=Thaps12087.4;Parent=Thaps12087;constitutive=1;ensembl_end_phase=1;rank=4 chr23 ensembl protein_coding_gene 342500 344371 . - . ID=Thaps25866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF0];external_name=Thaps25866;logic_name=jgi_thaps3 chr23 ensembl transcript 342500 344371 . - . ID=Thaps25866;Parent=Thaps25866;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 342500 342925 . - 0 ID=Thaps25866;Parent=Thaps25866;rank=2 chr23 . exon 342500 342925 . - . ID=Thaps25866.2;Parent=Thaps25866;constitutive=1;rank=2 chr23 . CDS 343022 344371 . - 0 ID=Thaps25866;Parent=Thaps25866;rank=1 chr23 . exon 343022 344371 . - . ID=Thaps25866.1;Parent=Thaps25866;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 348037 349682 . + . ID=Thaps12088;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF2];external_name=Thaps12088;logic_name=jgi_thaps3 chr23 ensembl transcript 348037 349682 . + . ID=Thaps12088;Parent=Thaps12088;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 348037 348066 . + 0 ID=Thaps12088;Parent=Thaps12088;rank=1 chr23 . exon 348037 348066 . + . ID=Thaps12088.1;Parent=Thaps12088;constitutive=1;rank=1 chr23 . CDS 348143 348397 . + 0 ID=Thaps12088;Parent=Thaps12088;rank=2 chr23 . exon 348143 348397 . + . ID=Thaps12088.2;Parent=Thaps12088;constitutive=1;rank=2 chr23 . CDS 348530 348578 . + 0 ID=Thaps12088;Parent=Thaps12088;rank=3 chr23 . exon 348530 348578 . + . ID=Thaps12088.3;Parent=Thaps12088;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . CDS 348790 349468 . + 0 ID=Thaps12088;Parent=Thaps12088;rank=4 chr23 . exon 348790 349468 . + . ID=Thaps12088.4;Parent=Thaps12088;constitutive=1;ensembl_end_phase=1;rank=4 chr23 . CDS 349562 349682 . + 0 ID=Thaps12088;Parent=Thaps12088;rank=5 chr23 . exon 349562 349682 . + . ID=Thaps12088.5;Parent=Thaps12088;constitutive=1;ensembl_end_phase=1;rank=5 chr23 ensembl protein_coding_gene 349833 351136 . - . ID=Thaps12089;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF3];external_name=Thaps12089;logic_name=jgi_thaps3 chr23 ensembl transcript 349833 351136 . - . ID=Thaps12089;Parent=Thaps12089;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 349833 350593 . - 0 ID=Thaps12089;Parent=Thaps12089;rank=2 chr23 . exon 349833 350593 . - . ID=Thaps12089.2;Parent=Thaps12089;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 350722 351136 . - 0 ID=Thaps12089;Parent=Thaps12089;rank=1 chr23 . exon 350722 351136 . - . ID=Thaps12089.1;Parent=Thaps12089;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 351414 351935 . + . ID=Thaps12090;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF4];external_name=Thaps12090;logic_name=jgi_thaps3 chr23 ensembl transcript 351414 351935 . + . ID=Thaps12090;Parent=Thaps12090;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 351414 351935 . + 0 ID=Thaps12090;Parent=Thaps12090;rank=1 chr23 . exon 351414 351935 . + . ID=Thaps12090.1;Parent=Thaps12090;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 352605 354285 . - . ID=Thaps12091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF5];external_name=Thaps12091;logic_name=jgi_thaps3 chr23 ensembl transcript 352605 354285 . - . ID=Thaps12091;Parent=Thaps12091;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 352605 352712 . - 0 ID=Thaps12091;Parent=Thaps12091;rank=3 chr23 . exon 352605 352712 . - . ID=Thaps12091.3;Parent=Thaps12091;constitutive=1;rank=3 chr23 . CDS 352820 353652 . - 0 ID=Thaps12091;Parent=Thaps12091;rank=2 chr23 . exon 352820 353652 . - . ID=Thaps12091.2;Parent=Thaps12091;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 353859 354285 . - 0 ID=Thaps12091;Parent=Thaps12091;rank=1 chr23 . exon 353859 354285 . - . ID=Thaps12091.1;Parent=Thaps12091;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 355151 357415 . + . ID=Thaps25867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF6];external_name=Thaps25867;logic_name=jgi_thaps3 chr23 ensembl transcript 355151 357415 . + . ID=Thaps25867;Parent=Thaps25867;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 355151 355958 . + 0 ID=Thaps25867;Parent=Thaps25867;rank=1 chr23 . exon 355151 355958 . + . ID=Thaps25867.1;Parent=Thaps25867;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 356070 356959 . + 0 ID=Thaps25867;Parent=Thaps25867;rank=2 chr23 . exon 356070 356959 . + . ID=Thaps25867.2;Parent=Thaps25867;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 357071 357415 . + 0 ID=Thaps25867;Parent=Thaps25867;rank=3 chr23 . repeat_region 358005 358019 . ? . description=dust chr23 ensembl protein_coding_gene 360249 361790 . - . ID=Thaps12094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF8];external_name=Thaps12094;logic_name=jgi_thaps3 chr23 ensembl transcript 360249 361790 . - . ID=Thaps12094;Parent=Thaps12094;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 360249 361790 . - 0 ID=Thaps12094;Parent=Thaps12094;rank=1 chr23 . exon 360249 361790 . - . ID=Thaps12094.1;Parent=Thaps12094;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 364226 365263 . + . ID=Thaps12095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF9];external_name=Thaps12095;logic_name=jgi_thaps3 chr23 ensembl transcript 364226 365263 . + . ID=Thaps12095;Parent=Thaps12095;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 364226 365263 . + 0 ID=Thaps12095;Parent=Thaps12095;rank=1 chr23 . exon 364226 365263 . + . ID=Thaps12095.1;Parent=Thaps12095;constitutive=1;rank=1 chr23 . exon 357071 357415 . + . ID=Thaps25867.3;Parent=Thaps25867;constitutive=1;rank=3 chr23 ensembl protein_coding_gene 358374 359399 . + . ID=Thaps25868;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGF7];external_name=Thaps25868;logic_name=jgi_thaps3 chr23 ensembl transcript 358374 359399 . + . ID=Thaps25868;Parent=Thaps25868;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 358374 359399 . + 0 ID=Thaps25868;Parent=Thaps25868;rank=1 chr23 . exon 358374 359399 . + . ID=Thaps25868.1;Parent=Thaps25868;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 365603 366232 . - . ID=Thaps264921;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein%2C LI818 clade [Source:UniProtKB/TrEMBL%3BAcc:B8CGG0];external_name=LHCX1;logic_name=jgi_thaps3 chr23 ensembl transcript 365603 366232 . - . ID=Thaps264921;Parent=Thaps264921;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 365603 366232 . - 0 ID=Thaps264921;Parent=Thaps264921;rank=1 chr23 . exon 365603 366232 . - . ID=Thaps264921.1;Parent=Thaps264921;constitutive=1;rank=1 chr23 . repeat_region 374227 374254 . ? . description=trf chr23 . repeat_region 375003 375043 . ? . description=trf chr23 ensembl protein_coding_gene 366611 367378 . + . ID=Thaps12097;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein%2C LI818 clade [Source:UniProtKB/TrEMBL%3BAcc:B8CGG1];external_name=LHCX6;logic_name=jgi_thaps3 chr23 ensembl transcript 366611 367378 . + . ID=Thaps12097;Parent=Thaps12097;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 366611 367378 . + 0 ID=Thaps12097;Parent=Thaps12097;rank=1 chr23 . exon 366611 367378 . + . ID=Thaps12097.1;Parent=Thaps12097;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 374253 376038 . + . ID=Thaps12100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGG4];external_name=Thaps12100;logic_name=jgi_thaps3 chr23 ensembl transcript 374253 376038 . + . ID=Thaps12100;Parent=Thaps12100;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 374253 375494 . + 0 ID=Thaps12100;Parent=Thaps12100;rank=1 chr23 . exon 374253 375494 . + . ID=Thaps12100.1;Parent=Thaps12100;constitutive=1;rank=1 chr23 . CDS 375517 376038 . + 0 ID=Thaps12100;Parent=Thaps12100;rank=2 chr23 . exon 375517 376038 . + . ID=Thaps12100.2;Parent=Thaps12100;constitutive=1;rank=2 chr23 ensembl protein_coding_gene 371664 372187 . + . ID=Thaps264925;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGG3];external_name=Thaps264925;logic_name=jgi_thaps3 chr23 ensembl transcript 371664 372187 . + . ID=Thaps264925;Parent=Thaps264925;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 371664 371905 . + 0 ID=Thaps264925;Parent=Thaps264925;rank=1 chr23 . exon 371664 371905 . + . ID=Thaps264925.1;Parent=Thaps264925;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 371957 372187 . + 0 ID=Thaps264925;Parent=Thaps264925;rank=2 chr23 . exon 371957 372187 . + . ID=Thaps264925.2;Parent=Thaps264925;constitutive=1;rank=2 chr23 ensembl protein_coding_gene 368273 368902 . + . ID=Thaps38879;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein%2C LI818 clade [Source:UniProtKB/TrEMBL%3BAcc:B8CGG2];external_name=LHCX2;logic_name=jgi_thaps3 chr23 ensembl transcript 368273 368902 . + . ID=Thaps38879;Parent=Thaps38879;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 368273 368902 . + 0 ID=Thaps38879;Parent=Thaps38879;rank=1 chr23 . exon 368273 368902 . + . ID=Thaps38879.1;Parent=Thaps38879;constitutive=1;rank=1 chr23 . repeat_region 384291 384311 . ? . description=dust chr23 ensembl protein_coding_gene 385209 386669 . - . ID=Thaps12103;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGG6];external_name=Thaps12103;logic_name=jgi_thaps3 chr23 ensembl transcript 385209 386669 . - . ID=Thaps12103;Parent=Thaps12103;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 385209 386669 . - 0 ID=Thaps12103;Parent=Thaps12103;rank=1 chr23 . exon 385209 386669 . - . ID=Thaps12103.1;Parent=Thaps12103;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 379880 384828 . - . ID=Thaps25869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGG5];external_name=Thaps25869;logic_name=jgi_thaps3 chr23 ensembl transcript 379880 384828 . - . ID=Thaps25869;Parent=Thaps25869;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 379880 380251 . - 0 ID=Thaps25869;Parent=Thaps25869;rank=4 chr23 . exon 379880 380251 . - . ID=Thaps25869.4;Parent=Thaps25869;constitutive=1;rank=4 chr23 . CDS 380330 381217 . - 0 ID=Thaps25869;Parent=Thaps25869;rank=3 chr23 . exon 380330 381217 . - . ID=Thaps25869.3;Parent=Thaps25869;constitutive=1;rank=3 chr23 . CDS 381319 383946 . - 0 ID=Thaps25869;Parent=Thaps25869;rank=2 chr23 . exon 381319 383946 . - . ID=Thaps25869.2;Parent=Thaps25869;constitutive=1;rank=2 chr23 . CDS 384094 384828 . - 0 ID=Thaps25869;Parent=Thaps25869;rank=1 chr23 . exon 384094 384828 . - . ID=Thaps25869.1;Parent=Thaps25869;constitutive=1;rank=1 chr23 ensembl gene 377553 379486 . + . ID=Thaps264926;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr23 ensembl transcript 377553 379486 . + . ID=Thaps264926;Parent=Thaps264926;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr23 . exon 377553 377688 . + . ID=Thaps264926.1;Parent=Thaps264926;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . exon 377819 378046 . + . ID=Thaps264926.2;Parent=Thaps264926;constitutive=1;rank=2 chr23 . exon 378104 378380 . + . ID=Thaps264926.3;Parent=Thaps264926;constitutive=1;ensembl_end_phase=1;rank=3 chr23 . exon 378420 378609 . + . ID=Thaps264926.4;Parent=Thaps264926;constitutive=1;ensembl_end_phase=1;rank=4 chr23 . exon 378625 378883 . + . ID=Thaps264926.5;Parent=Thaps264926;constitutive=1;ensembl_end_phase=1;rank=5 chr23 . exon 378911 379266 . + . ID=Thaps264926.6;Parent=Thaps264926;constitutive=1;ensembl_end_phase=2;rank=6 chr23 . exon 379348 379486 . + . ID=Thaps264926.7;Parent=Thaps264926;constitutive=1;ensembl_end_phase=1;rank=7 chr23 . repeat_region 386224 386252 . ? . description=trf chr23 . repeat_region 390600 390625 . ? . description=trf chr23 . repeat_region 391475 391498 . ? . description=trf chr23 . repeat_region 393444 393493 . ? . description=trf chr23 ensembl protein_coding_gene 387395 388873 . + . ID=Thaps12104;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGG7];external_name=Thaps12104;logic_name=jgi_thaps3 chr23 ensembl transcript 387395 388873 . + . ID=Thaps12104;Parent=Thaps12104;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 387395 387961 . + 0 ID=Thaps12104;Parent=Thaps12104;rank=1 chr23 . exon 387395 387961 . + . ID=Thaps12104.1;Parent=Thaps12104;constitutive=1;rank=1 chr23 . CDS 388040 388873 . + 0 ID=Thaps12104;Parent=Thaps12104;rank=2 chr23 . exon 388040 388873 . + . ID=Thaps12104.2;Parent=Thaps12104;constitutive=1;rank=2 chr23 ensembl protein_coding_gene 394936 396118 . + . ID=Thaps12107;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGH0];external_name=Thaps12107;logic_name=jgi_thaps3 chr23 ensembl transcript 394936 396118 . + . ID=Thaps12107;Parent=Thaps12107;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 394936 395051 . + 0 ID=Thaps12107;Parent=Thaps12107;rank=1 chr23 . exon 394936 395051 . + . ID=Thaps12107.1;Parent=Thaps12107;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 395174 395292 . + 0 ID=Thaps12107;Parent=Thaps12107;rank=2 chr23 . exon 395174 395292 . + . ID=Thaps12107.2;Parent=Thaps12107;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 395439 396118 . + 0 ID=Thaps12107;Parent=Thaps12107;rank=3 chr23 . exon 395439 396118 . + . ID=Thaps12107.3;Parent=Thaps12107;constitutive=1;ensembl_end_phase=2;rank=3 chr23 ensembl protein_coding_gene 389185 392568 . - . ID=Thaps25870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGG8];external_name=Thaps25870;logic_name=jgi_thaps3 chr23 ensembl transcript 389185 392568 . - . ID=Thaps25870;Parent=Thaps25870;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 389185 391545 . - 0 ID=Thaps25870;Parent=Thaps25870;rank=5 chr23 . exon 389185 391545 . - . ID=Thaps25870.5;Parent=Thaps25870;constitutive=1;rank=5 chr23 . CDS 391605 391777 . - 0 ID=Thaps25870;Parent=Thaps25870;rank=4 chr23 . exon 391605 391777 . - . ID=Thaps25870.4;Parent=Thaps25870;constitutive=1;ensembl_end_phase=2;rank=4 chr23 . CDS 392043 392122 . - 0 ID=Thaps25870;Parent=Thaps25870;rank=3 chr23 . exon 392043 392122 . - . ID=Thaps25870.3;Parent=Thaps25870;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . CDS 392258 392327 . - 0 ID=Thaps25870;Parent=Thaps25870;rank=2 chr23 . exon 392258 392327 . - . ID=Thaps25870.2;Parent=Thaps25870;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 392508 392568 . - 0 ID=Thaps25870;Parent=Thaps25870;rank=1 chr23 . exon 392508 392568 . - . ID=Thaps25870.1;Parent=Thaps25870;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 393107 394207 . + . ID=Thaps25871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGG9];external_name=Thaps25871;logic_name=jgi_thaps3 chr23 ensembl transcript 393107 394207 . + . ID=Thaps25871;Parent=Thaps25871;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 393107 394207 . + 0 ID=Thaps25871;Parent=Thaps25871;rank=1 chr23 . exon 393107 394207 . + . ID=Thaps25871.1;Parent=Thaps25871;constitutive=1;rank=1 chr23 . repeat_region 400705 400728 . ? . description=dust chr23 . biological_region 403521 403524 0.999 + . logic_name=eponine chr23 . repeat_region 404412 404431 . ? . description=dust chr23 ensembl tRNA_gene 402771 402843 . + . ID=EPrTPOG00000000037;biotype=tRNA;description=tRNA-Met for anticodon CAU [Source:TRNASCAN_SE%3BAcc:tRNA-Met];external_name=tRNA-Met;logic_name=ncrna_eg chr23 ensembl transcript 402771 402843 . + . ID=EPrTPOT00000000037;Parent=EPrTPOG00000000037;biotype=tRNA;logic_name=ncrna_eg chr23 . exon 402771 402843 . + . ID=EPrTPOE00000000037;Parent=EPrTPOT00000000037;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 396590 397645 . - . ID=Thaps25872;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGH1];external_name=Thaps25872;logic_name=jgi_thaps3 chr23 ensembl transcript 396590 397645 . - . ID=Thaps25872;Parent=Thaps25872;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 396590 397645 . - 0 ID=Thaps25872;Parent=Thaps25872;rank=1 chr23 . exon 396590 397645 . - . ID=Thaps25872.1;Parent=Thaps25872;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 400207 402570 . + . ID=Thaps25873;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGH2];external_name=Thaps25873;logic_name=jgi_thaps3 chr23 ensembl transcript 400207 402570 . + . ID=Thaps25873;Parent=Thaps25873;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 400207 402067 . + 0 ID=Thaps25873;Parent=Thaps25873;rank=1 chr23 . exon 400207 402067 . + . ID=Thaps25873.1;Parent=Thaps25873;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 402147 402233 . + 0 ID=Thaps25873;Parent=Thaps25873;rank=2 chr23 . exon 402147 402233 . + . ID=Thaps25873.2;Parent=Thaps25873;constitutive=1;rank=2 chr23 . CDS 402317 402570 . + 0 ID=Thaps25873;Parent=Thaps25873;rank=3 chr23 . exon 402317 402570 . + . ID=Thaps25873.3;Parent=Thaps25873;constitutive=1;ensembl_end_phase=2;rank=3 chr23 ensembl protein_coding_gene 404134 406962 . + . ID=Thaps25874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGH3];external_name=Thaps25874;logic_name=jgi_thaps3 chr23 ensembl transcript 404134 406962 . + . ID=Thaps25874;Parent=Thaps25874;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 404134 406962 . + 0 ID=Thaps25874;Parent=Thaps25874;rank=1 chr23 . exon 404134 406962 . + . ID=Thaps25874.1;Parent=Thaps25874;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 412402 413069 . - . ID=Thaps12114;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGH6];external_name=Thaps12114;logic_name=jgi_thaps3 chr23 ensembl transcript 412402 413069 . - . ID=Thaps12114;Parent=Thaps12114;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 412402 412864 . - 0 ID=Thaps12114;Parent=Thaps12114;rank=2 chr23 . exon 412402 412864 . - . ID=Thaps12114.2;Parent=Thaps12114;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 412916 413069 . - 0 ID=Thaps12114;Parent=Thaps12114;rank=1 chr23 . exon 412916 413069 . - . ID=Thaps12114.1;Parent=Thaps12114;constitutive=1;ensembl_end_phase=1;rank=1 chr23 ensembl protein_coding_gene 407759 408730 . + . ID=Thaps25875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGH4];external_name=Thaps25875;logic_name=jgi_thaps3 chr23 ensembl transcript 407759 408730 . + . ID=Thaps25875;Parent=Thaps25875;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 407759 408730 . + 0 ID=Thaps25875;Parent=Thaps25875;rank=1 chr23 . exon 407759 408730 . + . ID=Thaps25875.1;Parent=Thaps25875;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 414060 417528 . + . ID=Thaps25878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGH7];external_name=Thaps25878;logic_name=jgi_thaps3 chr23 ensembl transcript 414060 417528 . + . ID=Thaps25878;Parent=Thaps25878;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 414060 415740 . + 0 ID=Thaps25878;Parent=Thaps25878;rank=1 chr23 . exon 414060 415740 . + . ID=Thaps25878.1;Parent=Thaps25878;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 415877 415984 . + 0 ID=Thaps25878;Parent=Thaps25878;rank=2 chr23 . CDS 416071 416261 . + 0 ID=Thaps25878;Parent=Thaps25878;rank=3 chr23 . CDS 416340 416549 . + 0 ID=Thaps25878;Parent=Thaps25878;rank=4 chr23 . CDS 416624 417025 . + 0 ID=Thaps25878;Parent=Thaps25878;rank=5 chr23 . CDS 417106 417281 . + 0 ID=Thaps25878;Parent=Thaps25878;rank=6 chr23 . CDS 417312 417528 . + 0 ID=Thaps25878;Parent=Thaps25878;rank=7 chr23 ensembl protein_coding_gene 409964 412077 . + . ID=Thaps270136;biotype=protein_coding;description=N-acetylornithine aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CGH5];external_name=Thaps270136;logic_name=jgi_thaps3 chr23 ensembl transcript 409964 412077 . + . ID=Thaps270136;Parent=Thaps270136;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 409964 410267 . + 0 ID=Thaps270136;Parent=Thaps270136;rank=1 chr23 . exon 409964 410267 . + . ID=Thaps270136.1;Parent=Thaps270136;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 410834 411084 . + 0 ID=Thaps270136;Parent=Thaps270136;rank=2 chr23 . exon 410834 411084 . + . ID=Thaps270136.2;Parent=Thaps270136;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 411193 412077 . + 0 ID=Thaps270136;Parent=Thaps270136;rank=3 chr23 . exon 411193 412077 . + . ID=Thaps270136.3;Parent=Thaps270136;constitutive=1;rank=3 chr23 . repeat_region 421381 421428 . ? . description=trf chr23 . repeat_region 421819 421855 . ? . description=trf chr23 . repeat_region 421828 421863 . ? . description=trf chr23 . repeat_region 424364 424391 . ? . description=trf chr23 ensembl protein_coding_gene 421481 423395 . + . ID=Thaps12116;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGH8];external_name=Thaps12116;logic_name=jgi_thaps3 chr23 ensembl transcript 421481 423395 . + . ID=Thaps12116;Parent=Thaps12116;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 421481 421732 . + 0 ID=Thaps12116;Parent=Thaps12116;rank=1 chr23 . exon 421481 421732 . + . ID=Thaps12116.1;Parent=Thaps12116;constitutive=1;rank=1 chr23 . CDS 421894 421989 . + 0 ID=Thaps12116;Parent=Thaps12116;rank=2 chr23 . exon 421894 421989 . + . ID=Thaps12116.2;Parent=Thaps12116;constitutive=1;rank=2 chr23 . CDS 422087 422113 . + 0 ID=Thaps12116;Parent=Thaps12116;rank=3 chr23 . exon 422087 422113 . + . ID=Thaps12116.3;Parent=Thaps12116;constitutive=1;rank=3 chr23 . CDS 422200 422265 . + 0 ID=Thaps12116;Parent=Thaps12116;rank=4 chr23 . exon 422200 422265 . + . ID=Thaps12116.4;Parent=Thaps12116;constitutive=1;rank=4 chr23 . CDS 422389 422449 . + 0 ID=Thaps12116;Parent=Thaps12116;rank=5 chr23 . exon 422389 422449 . + . ID=Thaps12116.5;Parent=Thaps12116;constitutive=1;ensembl_end_phase=1;rank=5 chr23 . CDS 422557 423173 . + 0 ID=Thaps12116;Parent=Thaps12116;rank=6 chr23 . exon 422557 423173 . + . ID=Thaps12116.6;Parent=Thaps12116;constitutive=1;ensembl_end_phase=2;rank=6 chr23 . CDS 423207 423395 . + 0 ID=Thaps12116;Parent=Thaps12116;rank=7 chr23 . exon 423207 423395 . + . ID=Thaps12116.7;Parent=Thaps12116;constitutive=1;rank=7 chr23 . exon 415877 415984 . + . ID=Thaps25878.2;Parent=Thaps25878;constitutive=1;rank=2 chr23 . exon 416071 416261 . + . ID=Thaps25878.3;Parent=Thaps25878;constitutive=1;ensembl_end_phase=2;rank=3 chr23 . exon 416340 416549 . + . ID=Thaps25878.4;Parent=Thaps25878;constitutive=1;rank=4 chr23 . exon 416624 417025 . + . ID=Thaps25878.5;Parent=Thaps25878;constitutive=1;rank=5 chr23 . exon 417106 417281 . + . ID=Thaps25878.6;Parent=Thaps25878;constitutive=1;ensembl_end_phase=2;rank=6 chr23 . exon 417312 417528 . + . ID=Thaps25878.7;Parent=Thaps25878;constitutive=1;ensembl_end_phase=1;rank=7 chr23 ensembl protein_coding_gene 423944 430141 . + . ID=Thaps25879;biotype=protein_coding;description=DNA topoisomerase [Source:UniProtKB/TrEMBL%3BAcc:B8CGH9];external_name=Thaps25879;logic_name=jgi_thaps3 chr23 ensembl transcript 423944 430141 . + . ID=Thaps25879;Parent=Thaps25879;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 423944 424170 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=1 chr23 . exon 423944 424170 . + . ID=Thaps25879.1;Parent=Thaps25879;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 424297 424396 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=2 chr23 . exon 424297 424396 . + . ID=Thaps25879.2;Parent=Thaps25879;constitutive=1;ensembl_end_phase=1;rank=2 chr23 . CDS 424447 426087 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=3 chr23 . exon 424447 426087 . + . ID=Thaps25879.3;Parent=Thaps25879;constitutive=1;rank=3 chr23 . CDS 426172 426402 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=4 chr23 . CDS 426484 426566 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=5 chr23 . CDS 427040 427100 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=6 chr23 . CDS 427302 427390 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=7 chr23 . CDS 427473 427897 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=8 chr23 . CDS 428215 428425 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=9 chr23 . CDS 428524 428638 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=10 chr23 . CDS 428732 428926 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=11 chr23 . CDS 429004 429185 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=12 chr23 . CDS 429326 429599 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=13 chr23 . CDS 429669 429752 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=14 chr23 . CDS 429806 430141 . + 0 ID=Thaps25879;Parent=Thaps25879;rank=15 chr23 ensembl protein_coding_gene 430391 431164 . + . ID=Thaps12118;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI0];external_name=Thaps12118;logic_name=jgi_thaps3 chr23 ensembl transcript 430391 431164 . + . ID=Thaps12118;Parent=Thaps12118;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 430391 431164 . + 0 ID=Thaps12118;Parent=Thaps12118;rank=1 chr23 . exon 430391 431164 . + . ID=Thaps12118.1;Parent=Thaps12118;constitutive=1;rank=1 chr23 . exon 426172 426402 . + . ID=Thaps25879.4;Parent=Thaps25879;constitutive=1;rank=4 chr23 . exon 426484 426566 . + . ID=Thaps25879.5;Parent=Thaps25879;constitutive=1;ensembl_end_phase=2;rank=5 chr23 . exon 427040 427100 . + . ID=Thaps25879.6;Parent=Thaps25879;constitutive=1;ensembl_end_phase=1;rank=6 chr23 . exon 427302 427390 . + . ID=Thaps25879.7;Parent=Thaps25879;constitutive=1;ensembl_end_phase=2;rank=7 chr23 . exon 427473 427897 . + . ID=Thaps25879.8;Parent=Thaps25879;constitutive=1;ensembl_end_phase=2;rank=8 chr23 . exon 428215 428425 . + . ID=Thaps25879.9;Parent=Thaps25879;constitutive=1;ensembl_end_phase=1;rank=9 chr23 . exon 428524 428638 . + . ID=Thaps25879.10;Parent=Thaps25879;constitutive=1;ensembl_end_phase=1;rank=10 chr23 . exon 428732 428926 . + . ID=Thaps25879.11;Parent=Thaps25879;constitutive=1;rank=11 chr23 . exon 429004 429185 . + . ID=Thaps25879.12;Parent=Thaps25879;constitutive=1;ensembl_end_phase=2;rank=12 chr23 . exon 429326 429599 . + . ID=Thaps25879.13;Parent=Thaps25879;constitutive=1;ensembl_end_phase=1;rank=13 chr23 . exon 429669 429752 . + . ID=Thaps25879.14;Parent=Thaps25879;constitutive=1;rank=14 chr23 . exon 429806 430141 . + . ID=Thaps25879.15;Parent=Thaps25879;constitutive=1;rank=15 chr23 ensembl protein_coding_gene 433387 433857 . - . ID=Thaps38807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI1];external_name=Thaps38807;logic_name=jgi_thaps3 chr23 ensembl transcript 433387 433857 . - . ID=Thaps38807;Parent=Thaps38807;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 433387 433857 . - 0 ID=Thaps38807;Parent=Thaps38807;rank=1 chr23 . exon 433387 433857 . - . ID=Thaps38807.1;Parent=Thaps38807;constitutive=1;rank=1 chr23 . repeat_region 436216 436247 . ? . description=trf chr23 . repeat_region 439072 439779 . - . description=Copia7I_TP chr23 . repeat_region 442561 444100 . + . description=tp3_ASNotSingleton chr23 . repeat_region 444216 444241 . ? . description=dust chr23 . repeat_region 444286 444450 . - . description=Copia7I_TP chr23 . repeat_region 444562 444826 . - . description=MuDR1_TP chr23 . repeat_region 444721 444740 . ? . description=dust chr23 ensembl protein_coding_gene 435350 436686 . + . ID=Thaps12120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI2];external_name=Thaps12120;logic_name=jgi_thaps3 chr23 ensembl transcript 435350 436686 . + . ID=Thaps12120;Parent=Thaps12120;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 435350 435609 . + 0 ID=Thaps12120;Parent=Thaps12120;rank=1 chr23 . exon 435350 435609 . + . ID=Thaps12120.1;Parent=Thaps12120;constitutive=1;ensembl_end_phase=2;rank=1 chr23 . CDS 435740 436192 . + 0 ID=Thaps12120;Parent=Thaps12120;rank=2 chr23 . exon 435740 436192 . + . ID=Thaps12120.2;Parent=Thaps12120;constitutive=1;rank=2 chr23 . CDS 436284 436686 . + 0 ID=Thaps12120;Parent=Thaps12120;rank=3 chr23 . exon 436284 436686 . + . ID=Thaps12120.3;Parent=Thaps12120;constitutive=1;ensembl_end_phase=1;rank=3 chr23 ensembl protein_coding_gene 439793 442440 . + . ID=Thaps12122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI4];external_name=Thaps12122;logic_name=jgi_thaps3 chr23 ensembl transcript 439793 442440 . + . ID=Thaps12122;Parent=Thaps12122;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 439793 440365 . + 0 ID=Thaps12122;Parent=Thaps12122;rank=1 chr23 . exon 439793 440365 . + . ID=Thaps12122.1;Parent=Thaps12122;constitutive=1;rank=1 chr23 . CDS 440528 441642 . + 0 ID=Thaps12122;Parent=Thaps12122;rank=2 chr23 . exon 440528 441642 . + . ID=Thaps12122.2;Parent=Thaps12122;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 441751 442386 . + 0 ID=Thaps12122;Parent=Thaps12122;rank=3 chr23 . exon 441751 442386 . + . ID=Thaps12122.3;Parent=Thaps12122;constitutive=1;rank=3 chr23 . CDS 442407 442440 . + 0 ID=Thaps12122;Parent=Thaps12122;rank=4 chr23 . exon 442407 442440 . + . ID=Thaps12122.4;Parent=Thaps12122;constitutive=1;ensembl_end_phase=1;rank=4 chr23 ensembl protein_coding_gene 437202 438686 . - . ID=Thaps25881;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI3];external_name=Thaps25881;logic_name=jgi_thaps3 chr23 ensembl transcript 437202 438686 . - . ID=Thaps25881;Parent=Thaps25881;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 437202 438686 . - 0 ID=Thaps25881;Parent=Thaps25881;rank=1 chr23 . exon 437202 438686 . - . ID=Thaps25881.1;Parent=Thaps25881;constitutive=1;rank=1 chr23 . repeat_region 448154 448401 . - . description=TE2c_TP chr23 . repeat_region 448414 448989 . - . description=Harbinger2N_TP chr23 . repeat_region 448990 449386 . + . description=Harbinger4_TP chr23 . repeat_region 452388 452561 . - . description=SAT1_TP chr23 . repeat_region 452562 452717 . - . description=SAT1_TP chr23 . repeat_region 452736 452909 . - . description=SAT1_TP chr23 . repeat_region 452910 453083 . - . description=SAT1_TP chr23 . repeat_region 453084 453257 . - . description=SAT1_TP chr23 . repeat_region 453258 453406 . - . description=SAT1_TP chr23 ensembl protein_coding_gene 445816 446356 . + . ID=Thaps12123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI5];external_name=Thaps12123;logic_name=jgi_thaps3 chr23 ensembl transcript 445816 446356 . + . ID=Thaps12123;Parent=Thaps12123;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 445816 446152 . + 0 ID=Thaps12123;Parent=Thaps12123;rank=1 chr23 . exon 445816 446152 . + . ID=Thaps12123.1;Parent=Thaps12123;constitutive=1;ensembl_end_phase=1;rank=1 chr23 . CDS 446229 446285 . + 0 ID=Thaps12123;Parent=Thaps12123;rank=2 chr23 . exon 446229 446285 . + . ID=Thaps12123.2;Parent=Thaps12123;constitutive=1;rank=2 chr23 . CDS 446307 446356 . + 0 ID=Thaps12123;Parent=Thaps12123;rank=3 chr23 . exon 446307 446356 . + . ID=Thaps12123.3;Parent=Thaps12123;constitutive=1;ensembl_end_phase=2;rank=3 chr23 ensembl protein_coding_gene 449574 451739 . - . ID=Thaps12124;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI6];external_name=Thaps12124;logic_name=jgi_thaps3 chr23 ensembl transcript 449574 451739 . - . ID=Thaps12124;Parent=Thaps12124;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 449574 449778 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=11 chr23 . exon 449574 449778 . - . ID=Thaps12124.11;Parent=Thaps12124;constitutive=1;ensembl_end_phase=1;rank=11 chr23 . CDS 449883 449964 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=10 chr23 . exon 449883 449964 . - . ID=Thaps12124.10;Parent=Thaps12124;constitutive=1;ensembl_end_phase=1;rank=10 chr23 . CDS 450104 450135 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=9 chr23 . exon 450104 450135 . - . ID=Thaps12124.9;Parent=Thaps12124;constitutive=1;ensembl_end_phase=2;rank=9 chr23 . CDS 450233 450320 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=8 chr23 . exon 450233 450320 . - . ID=Thaps12124.8;Parent=Thaps12124;constitutive=1;ensembl_end_phase=1;rank=8 chr23 . CDS 450404 450581 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=7 chr23 . exon 450404 450581 . - . ID=Thaps12124.7;Parent=Thaps12124;constitutive=1;ensembl_end_phase=1;rank=7 chr23 . CDS 450720 450770 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=6 chr23 . exon 450720 450770 . - . ID=Thaps12124.6;Parent=Thaps12124;constitutive=1;rank=6 chr23 . CDS 450925 451011 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=5 chr23 . exon 450925 451011 . - . ID=Thaps12124.5;Parent=Thaps12124;constitutive=1;rank=5 chr23 . CDS 451132 451218 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=4 chr23 . exon 451132 451218 . - . ID=Thaps12124.4;Parent=Thaps12124;constitutive=1;rank=4 chr23 . CDS 451339 451425 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=3 chr23 . exon 451339 451425 . - . ID=Thaps12124.3;Parent=Thaps12124;constitutive=1;rank=3 chr23 . CDS 451500 451535 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=2 chr23 . exon 451500 451535 . - . ID=Thaps12124.2;Parent=Thaps12124;constitutive=1;rank=2 chr23 . CDS 451641 451739 . - 0 ID=Thaps12124;Parent=Thaps12124;rank=1 chr23 . exon 451641 451739 . - . ID=Thaps12124.1;Parent=Thaps12124;constitutive=1;rank=1 chr23 ensembl protein_coding_gene 452777 453733 . - . ID=Thaps264928;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CGI7];external_name=Thaps264928;logic_name=jgi_thaps3 chr23 ensembl transcript 452777 453733 . - . ID=Thaps264928;Parent=Thaps264928;biotype=protein_coding;logic_name=jgi_thaps3 chr23 . CDS 452777 453333 . - 0 ID=Thaps264928;Parent=Thaps264928;rank=2 chr23 . exon 452777 453333 . - . ID=Thaps264928.2;Parent=Thaps264928;constitutive=1;ensembl_end_phase=2;rank=2 chr23 . CDS 453379 453733 . - 0 ID=Thaps264928;Parent=Thaps264928;rank=1 chr23 . exon 453379 453733 . - . ID=Thaps264928.1;Parent=Thaps264928;constitutive=1;ensembl_end_phase=1;rank=1 ##gff-version 3 ##sequence-region 16a 1 459776 chr16a . repeat_region 1 44 . ? . description=trf chr16a . repeat_region 1 44 . ? . description=dust chr16a . repeat_region 652 659 . ? . description=dust chr16a . repeat_region 6424 7073 . - . description=Gypsy3LTR_TP chr16a . repeat_region 6502 6537 . ? . description=trf chr16a . repeat_region 6517 6573 . ? . description=trf chr16a ensembl protein_coding_gene 56 2975 . - . ID=Thaps10320;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB2];external_name=Thaps10320;logic_name=jgi_thaps3 chr16a ensembl transcript 56 2975 . - . ID=Thaps10320;Parent=Thaps10320;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 56 201 . - 0 ID=Thaps10320;Parent=Thaps10320;rank=7 chr16a . exon 56 201 . - . ID=Thaps10320.7;Parent=Thaps10320;constitutive=1;ensembl_end_phase=2;rank=7 chr16a . CDS 299 611 . - 0 ID=Thaps10320;Parent=Thaps10320;rank=6 chr16a . exon 299 611 . - . ID=Thaps10320.6;Parent=Thaps10320;constitutive=1;ensembl_end_phase=1;rank=6 chr16a . CDS 689 836 . - 0 ID=Thaps10320;Parent=Thaps10320;rank=5 chr16a . exon 689 836 . - . ID=Thaps10320.5;Parent=Thaps10320;constitutive=1;ensembl_end_phase=1;rank=5 chr16a . CDS 915 1129 . - 0 ID=Thaps10320;Parent=Thaps10320;rank=4 chr16a . exon 915 1129 . - . ID=Thaps10320.4;Parent=Thaps10320;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 1211 1549 . - 0 ID=Thaps10320;Parent=Thaps10320;rank=3 chr16a . exon 1211 1549 . - . ID=Thaps10320.3;Parent=Thaps10320;constitutive=1;rank=3 chr16a . CDS 1641 2787 . - 0 ID=Thaps10320;Parent=Thaps10320;rank=2 chr16a . exon 1641 2787 . - . ID=Thaps10320.2;Parent=Thaps10320;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 2836 2975 . - 0 ID=Thaps10320;Parent=Thaps10320;rank=1 chr16a . exon 2836 2975 . - . ID=Thaps10320.1;Parent=Thaps10320;constitutive=1;ensembl_end_phase=2;rank=1 chr16a ensembl protein_coding_gene 5293 5832 . - . ID=Thaps10321;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB3];external_name=Thaps10321;logic_name=jgi_thaps3 chr16a ensembl transcript 5293 5832 . - . ID=Thaps10321;Parent=Thaps10321;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 5293 5832 . - 0 ID=Thaps10321;Parent=Thaps10321;rank=1 chr16a . exon 5293 5832 . - . ID=Thaps10321.1;Parent=Thaps10321;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 7755 9307 . - . ID=Thaps10322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB4];external_name=Thaps10322;logic_name=jgi_thaps3 chr16a ensembl transcript 7755 9307 . - . ID=Thaps10322;Parent=Thaps10322;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 7755 7873 . - 0 ID=Thaps10322;Parent=Thaps10322;rank=2 chr16a . exon 7755 7873 . - . ID=Thaps10322.2;Parent=Thaps10322;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 7900 9307 . - 0 ID=Thaps10322;Parent=Thaps10322;rank=1 chr16a . exon 7900 9307 . - . ID=Thaps10322.1;Parent=Thaps10322;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 15776 16909 . + . ID=Thaps10325;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB8];external_name=Thaps10325;logic_name=jgi_thaps3 chr16a ensembl transcript 15776 16909 . + . ID=Thaps10325;Parent=Thaps10325;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 15776 16909 . + 0 ID=Thaps10325;Parent=Thaps10325;rank=1 chr16a . exon 15776 16909 . + . ID=Thaps10325.1;Parent=Thaps10325;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 13324 14145 . - . ID=Thaps25091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB6];external_name=Thaps25091;logic_name=jgi_thaps3 chr16a ensembl transcript 13324 14145 . - . ID=Thaps25091;Parent=Thaps25091;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 13324 14145 . - 0 ID=Thaps25091;Parent=Thaps25091;rank=1 chr16a . exon 13324 14145 . - . ID=Thaps25091.1;Parent=Thaps25091;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 14568 15428 . + . ID=Thaps25092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB7];external_name=Thaps25092;logic_name=jgi_thaps3 chr16a ensembl transcript 14568 15428 . + . ID=Thaps25092;Parent=Thaps25092;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 14568 15428 . + 0 ID=Thaps25092;Parent=Thaps25092;rank=1 chr16a . exon 14568 15428 . + . ID=Thaps25092.1;Parent=Thaps25092;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 17669 18427 . + . ID=Thaps25093;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB9];external_name=Thaps25093;logic_name=jgi_thaps3 chr16a ensembl transcript 17669 18427 . + . ID=Thaps25093;Parent=Thaps25093;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 17669 18427 . + 0 ID=Thaps25093;Parent=Thaps25093;rank=1 chr16a . exon 17669 18427 . + . ID=Thaps25093.1;Parent=Thaps25093;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 18506 19599 . - . ID=Thaps25094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC0];external_name=Thaps25094;logic_name=jgi_thaps3 chr16a ensembl transcript 18506 19599 . - . ID=Thaps25094;Parent=Thaps25094;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 18506 18543 . - 0 ID=Thaps25094;Parent=Thaps25094;rank=3 chr16a . exon 18506 18543 . - . ID=Thaps25094.3;Parent=Thaps25094;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 18596 19479 . - 0 ID=Thaps25094;Parent=Thaps25094;rank=2 chr16a . exon 18596 19479 . - . ID=Thaps25094.2;Parent=Thaps25094;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 19523 19599 . - 0 ID=Thaps25094;Parent=Thaps25094;rank=1 chr16a . exon 19523 19599 . - . ID=Thaps25094.1;Parent=Thaps25094;constitutive=1;ensembl_end_phase=2;rank=1 chr16a ensembl protein_coding_gene 10245 10508 . + . ID=Thaps37803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCB5];external_name=Thaps37803;logic_name=jgi_thaps3 chr16a ensembl transcript 10245 10508 . + . ID=Thaps37803;Parent=Thaps37803;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 10245 10508 . + 0 ID=Thaps37803;Parent=Thaps37803;rank=1 chr16a . exon 10245 10508 . + . ID=Thaps37803.1;Parent=Thaps37803;constitutive=1;rank=1 chr16a . repeat_region 25232 25253 . ? . description=dust chr16a . repeat_region 27668 27676 . ? . description=dust chr16a ensembl protein_coding_gene 23892 26786 . - . ID=Thaps25095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC2];external_name=Thaps25095;logic_name=jgi_thaps3 chr16a ensembl transcript 23892 26786 . - . ID=Thaps25095;Parent=Thaps25095;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 23892 26786 . - 0 ID=Thaps25095;Parent=Thaps25095;rank=1 chr16a . exon 23892 26786 . - . ID=Thaps25095.1;Parent=Thaps25095;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 27247 30422 . + . ID=Thaps25096;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC3];external_name=Thaps25096;logic_name=jgi_thaps3 chr16a ensembl transcript 27247 30422 . + . ID=Thaps25096;Parent=Thaps25096;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 27247 27329 . + 0 ID=Thaps25096;Parent=Thaps25096;rank=1 chr16a . exon 27247 27329 . + . ID=Thaps25096.1;Parent=Thaps25096;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 27434 30422 . + 0 ID=Thaps25096;Parent=Thaps25096;rank=2 chr16a . exon 27434 30422 . + . ID=Thaps25096.2;Parent=Thaps25096;constitutive=1;ensembl_end_phase=1;rank=2 chr16a ensembl protein_coding_gene 21760 22465 . - . ID=Thaps37810;biotype=protein_coding;description=Guanylate kinase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC1];external_name=Thaps37810;logic_name=jgi_thaps3 chr16a ensembl transcript 21760 22465 . - . ID=Thaps37810;Parent=Thaps37810;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 21760 22072 . - 0 ID=Thaps37810;Parent=Thaps37810;rank=2 chr16a . exon 21760 22072 . - . ID=Thaps37810.2;Parent=Thaps37810;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 22200 22465 . - 0 ID=Thaps37810;Parent=Thaps37810;rank=1 chr16a . exon 22200 22465 . - . ID=Thaps37810.1;Parent=Thaps37810;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . repeat_region 30618 30762 . + . description=Harbinger3_TP chr16a ensembl protein_coding_gene 30899 63337 . - . ID=Thaps10331;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC4];external_name=Thaps10331;logic_name=jgi_thaps3 chr16a ensembl transcript 30899 63337 . - . ID=Thaps10331;Parent=Thaps10331;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 30899 31293 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=77 chr16a . exon 30899 31293 . - . ID=Thaps10331.77;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=77 chr16a . CDS 31383 32176 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=76 chr16a . exon 31383 32176 . - . ID=Thaps10331.76;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=76 chr16a . CDS 32262 32346 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=75 chr16a . exon 32262 32346 . - . ID=Thaps10331.75;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=75 chr16a . CDS 32434 33612 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=74 chr16a . exon 32434 33612 . - . ID=Thaps10331.74;Parent=Thaps10331;constitutive=1;rank=74 chr16a . CDS 33831 33997 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=73 chr16a . exon 33831 33997 . - . ID=Thaps10331.73;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=73 chr16a . CDS 34080 34217 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=72 chr16a . exon 34080 34217 . - . ID=Thaps10331.72;Parent=Thaps10331;constitutive=1;rank=72 chr16a . CDS 34306 34327 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=71 chr16a . exon 34306 34327 . - . ID=Thaps10331.71;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=71 chr16a . CDS 34355 34477 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=70 chr16a . exon 34355 34477 . - . ID=Thaps10331.70;Parent=Thaps10331;constitutive=1;rank=70 chr16a . CDS 34565 34825 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=69 chr16a . exon 34565 34825 . - . ID=Thaps10331.69;Parent=Thaps10331;constitutive=1;rank=69 chr16a . CDS 34922 35372 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=68 chr16a . exon 34922 35372 . - . ID=Thaps10331.68;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=68 chr16a . CDS 35449 36705 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=67 chr16a . exon 35449 36705 . - . ID=Thaps10331.67;Parent=Thaps10331;constitutive=1;rank=67 chr16a . CDS 36784 36999 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=66 chr16a . exon 36784 36999 . - . ID=Thaps10331.66;Parent=Thaps10331;constitutive=1;rank=66 chr16a . CDS 37095 37255 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=65 chr16a . exon 37095 37255 . - . ID=Thaps10331.65;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=65 chr16a . CDS 37348 37824 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=64 chr16a . exon 37348 37824 . - . ID=Thaps10331.64;Parent=Thaps10331;constitutive=1;rank=64 chr16a . CDS 37941 38376 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=63 chr16a . exon 37941 38376 . - . ID=Thaps10331.63;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=63 chr16a . CDS 38456 38659 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=62 chr16a . exon 38456 38659 . - . ID=Thaps10331.62;Parent=Thaps10331;constitutive=1;rank=62 chr16a . CDS 38757 39068 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=61 chr16a . exon 38757 39068 . - . ID=Thaps10331.61;Parent=Thaps10331;constitutive=1;rank=61 chr16a . CDS 39118 39148 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=60 chr16a . exon 39118 39148 . - . ID=Thaps10331.60;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=60 chr16a . CDS 39223 39313 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=59 chr16a . exon 39223 39313 . - . ID=Thaps10331.59;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=59 chr16a . CDS 39398 39562 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=58 chr16a . exon 39398 39562 . - . ID=Thaps10331.58;Parent=Thaps10331;constitutive=1;rank=58 chr16a . CDS 39650 39699 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=57 chr16a . exon 39650 39699 . - . ID=Thaps10331.57;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=57 chr16a . CDS 40059 40351 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=56 chr16a . CDS 40427 40935 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=55 chr16a . CDS 41026 42393 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=54 chr16a . CDS 42467 43306 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=53 chr16a . CDS 43391 43420 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=52 chr16a . CDS 43535 43642 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=51 chr16a . CDS 43728 44032 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=50 chr16a . CDS 44084 44234 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=49 chr16a . CDS 44312 44740 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=48 chr16a . CDS 44818 44868 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=47 chr16a . CDS 44947 45106 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=46 chr16a . CDS 45165 45496 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=45 chr16a . CDS 45586 45825 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=44 chr16a . CDS 45914 45966 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=43 chr16a . CDS 46053 46071 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=42 chr16a . CDS 46165 46279 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=41 chr16a . CDS 46390 46626 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=40 chr16a . CDS 46739 46905 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=39 chr16a . CDS 47003 47088 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=38 chr16a . CDS 47169 47716 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=37 chr16a . CDS 47808 48090 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=36 chr16a . CDS 48188 48237 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=35 chr16a . CDS 48322 48420 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=34 chr16a . CDS 48511 48963 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=33 chr16a . CDS 49047 49408 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=32 chr16a . CDS 49480 49885 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=31 chr16a . CDS 49927 50371 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=30 chr16a . CDS 50448 50492 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=29 chr16a . CDS 50573 50598 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=28 chr16a . CDS 50673 50716 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=27 chr16a . CDS 50804 51013 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=26 chr16a . CDS 51105 51351 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=25 chr16a . CDS 51437 51568 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=24 chr16a . CDS 51694 51987 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=23 chr16a . CDS 52061 52108 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=22 chr16a . CDS 52206 52253 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=21 chr16a . CDS 52351 52398 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=20 chr16a . CDS 52496 52543 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=19 chr16a . CDS 52641 52759 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=18 chr16a . CDS 52833 52996 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=17 chr16a . CDS 53098 53128 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=16 chr16a . CDS 53204 53536 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=15 chr16a . CDS 53632 53769 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=14 chr16a . CDS 53858 54568 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=13 chr16a . CDS 54805 54870 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=12 chr16a . CDS 54967 56684 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=11 chr16a . CDS 56750 57044 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=10 chr16a . CDS 57125 57699 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=9 chr16a . CDS 57782 57843 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=8 chr16a . CDS 57929 58467 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=7 chr16a . CDS 59022 59476 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=6 chr16a . CDS 59558 59990 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=5 chr16a . CDS 60085 60684 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=4 chr16a . CDS 60783 61611 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=3 chr16a . CDS 61855 62216 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=2 chr16a . CDS 62350 63337 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=1 chr16a . repeat_region 41097 41878 . ? . description=trf chr16a . exon 40059 40351 . - . ID=Thaps10331.56;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=56 chr16a . exon 40427 40935 . - . ID=Thaps10331.55;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=55 chr16a . exon 41026 42393 . - . ID=Thaps10331.54;Parent=Thaps10331;constitutive=1;rank=54 chr16a . exon 42467 43306 . - . ID=Thaps10331.53;Parent=Thaps10331;constitutive=1;rank=53 chr16a . exon 43391 43420 . - . ID=Thaps10331.52;Parent=Thaps10331;constitutive=1;rank=52 chr16a . exon 43535 43642 . - . ID=Thaps10331.51;Parent=Thaps10331;constitutive=1;rank=51 chr16a . exon 43728 44032 . - . ID=Thaps10331.50;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=50 chr16a . exon 44084 44234 . - . ID=Thaps10331.49;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=49 chr16a . exon 44312 44740 . - . ID=Thaps10331.48;Parent=Thaps10331;constitutive=1;rank=48 chr16a . exon 44818 44868 . - . ID=Thaps10331.47;Parent=Thaps10331;constitutive=1;rank=47 chr16a . exon 44947 45106 . - . ID=Thaps10331.46;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=46 chr16a . exon 45165 45496 . - . ID=Thaps10331.45;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=45 chr16a . exon 45586 45825 . - . ID=Thaps10331.44;Parent=Thaps10331;constitutive=1;rank=44 chr16a . exon 45914 45966 . - . ID=Thaps10331.43;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=43 chr16a . exon 46053 46071 . - . ID=Thaps10331.42;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=42 chr16a . exon 46165 46279 . - . ID=Thaps10331.41;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=41 chr16a . exon 46390 46626 . - . ID=Thaps10331.40;Parent=Thaps10331;constitutive=1;rank=40 chr16a . exon 46739 46905 . - . ID=Thaps10331.39;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=39 chr16a . exon 47003 47088 . - . ID=Thaps10331.38;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=38 chr16a . exon 47169 47716 . - . ID=Thaps10331.37;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=37 chr16a . exon 47808 48090 . - . ID=Thaps10331.36;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=36 chr16a . exon 48188 48237 . - . ID=Thaps10331.35;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=35 chr16a . exon 48322 48420 . - . ID=Thaps10331.34;Parent=Thaps10331;constitutive=1;rank=34 chr16a . exon 48511 48963 . - . ID=Thaps10331.33;Parent=Thaps10331;constitutive=1;rank=33 chr16a . exon 49047 49408 . - . ID=Thaps10331.32;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=32 chr16a . exon 49480 49885 . - . ID=Thaps10331.31;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=31 chr16a . exon 49927 50371 . - . ID=Thaps10331.30;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=30 chr16a ensembl protein_coding_gene 30899 63337 . - . ID=Thaps10331;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC4];external_name=Thaps10331;logic_name=jgi_thaps3 chr16a ensembl transcript 30899 63337 . - . ID=Thaps10331;Parent=Thaps10331;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 30899 31293 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=77 chr16a . CDS 31383 32176 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=76 chr16a . CDS 32262 32346 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=75 chr16a . CDS 32434 33612 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=74 chr16a . CDS 33831 33997 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=73 chr16a . CDS 34080 34217 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=72 chr16a . CDS 34306 34327 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=71 chr16a . CDS 34355 34477 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=70 chr16a . CDS 34565 34825 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=69 chr16a . CDS 34922 35372 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=68 chr16a . CDS 35449 36705 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=67 chr16a . CDS 36784 36999 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=66 chr16a . CDS 37095 37255 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=65 chr16a . CDS 37348 37824 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=64 chr16a . CDS 37941 38376 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=63 chr16a . CDS 38456 38659 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=62 chr16a . CDS 38757 39068 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=61 chr16a . CDS 39118 39148 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=60 chr16a . CDS 39223 39313 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=59 chr16a . CDS 39398 39562 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=58 chr16a . CDS 39650 39699 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=57 chr16a . CDS 40059 40351 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=56 chr16a . CDS 40427 40935 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=55 chr16a . CDS 41026 42393 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=54 chr16a . CDS 42467 43306 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=53 chr16a . CDS 43391 43420 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=52 chr16a . CDS 43535 43642 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=51 chr16a . CDS 43728 44032 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=50 chr16a . CDS 44084 44234 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=49 chr16a . CDS 44312 44740 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=48 chr16a . CDS 44818 44868 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=47 chr16a . CDS 44947 45106 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=46 chr16a . CDS 45165 45496 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=45 chr16a . CDS 45586 45825 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=44 chr16a . CDS 45914 45966 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=43 chr16a . CDS 46053 46071 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=42 chr16a . CDS 46165 46279 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=41 chr16a . CDS 46390 46626 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=40 chr16a . CDS 46739 46905 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=39 chr16a . CDS 47003 47088 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=38 chr16a . CDS 47169 47716 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=37 chr16a . CDS 47808 48090 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=36 chr16a . CDS 48188 48237 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=35 chr16a . CDS 48322 48420 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=34 chr16a . CDS 48511 48963 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=33 chr16a . CDS 49047 49408 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=32 chr16a . CDS 49480 49885 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=31 chr16a . CDS 49927 50371 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=30 chr16a . CDS 50448 50492 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=29 chr16a . exon 50448 50492 . - . ID=Thaps10331.29;Parent=Thaps10331;constitutive=1;rank=29 chr16a . CDS 50573 50598 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=28 chr16a . exon 50573 50598 . - . ID=Thaps10331.28;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=28 chr16a . CDS 50673 50716 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=27 chr16a . exon 50673 50716 . - . ID=Thaps10331.27;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=27 chr16a . CDS 50804 51013 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=26 chr16a . exon 50804 51013 . - . ID=Thaps10331.26;Parent=Thaps10331;constitutive=1;rank=26 chr16a . CDS 51105 51351 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=25 chr16a . exon 51105 51351 . - . ID=Thaps10331.25;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=25 chr16a . CDS 51437 51568 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=24 chr16a . exon 51437 51568 . - . ID=Thaps10331.24;Parent=Thaps10331;constitutive=1;rank=24 chr16a . CDS 51694 51987 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=23 chr16a . exon 51694 51987 . - . ID=Thaps10331.23;Parent=Thaps10331;constitutive=1;rank=23 chr16a . CDS 52061 52108 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=22 chr16a . exon 52061 52108 . - . ID=Thaps10331.22;Parent=Thaps10331;constitutive=1;rank=22 chr16a . CDS 52206 52253 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=21 chr16a . exon 52206 52253 . - . ID=Thaps10331.21;Parent=Thaps10331;constitutive=1;rank=21 chr16a . CDS 52351 52398 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=20 chr16a . exon 52351 52398 . - . ID=Thaps10331.20;Parent=Thaps10331;constitutive=1;rank=20 chr16a . CDS 52496 52543 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=19 chr16a . exon 52496 52543 . - . ID=Thaps10331.19;Parent=Thaps10331;constitutive=1;rank=19 chr16a . CDS 52641 52759 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=18 chr16a . exon 52641 52759 . - . ID=Thaps10331.18;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=18 chr16a . CDS 52833 52996 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=17 chr16a . exon 52833 52996 . - . ID=Thaps10331.17;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=17 chr16a . CDS 53098 53128 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=16 chr16a . exon 53098 53128 . - . ID=Thaps10331.16;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=16 chr16a . CDS 53204 53536 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=15 chr16a . exon 53204 53536 . - . ID=Thaps10331.15;Parent=Thaps10331;constitutive=1;rank=15 chr16a . CDS 53632 53769 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=14 chr16a . exon 53632 53769 . - . ID=Thaps10331.14;Parent=Thaps10331;constitutive=1;rank=14 chr16a . CDS 53858 54568 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=13 chr16a . exon 53858 54568 . - . ID=Thaps10331.13;Parent=Thaps10331;constitutive=1;rank=13 chr16a . CDS 54805 54870 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=12 chr16a . exon 54805 54870 . - . ID=Thaps10331.12;Parent=Thaps10331;constitutive=1;rank=12 chr16a . CDS 54967 56684 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=11 chr16a . exon 54967 56684 . - . ID=Thaps10331.11;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=11 chr16a . CDS 56750 57044 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=10 chr16a . exon 56750 57044 . - . ID=Thaps10331.10;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=10 chr16a . CDS 57125 57699 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=9 chr16a . exon 57125 57699 . - . ID=Thaps10331.9;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=9 chr16a . CDS 57782 57843 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=8 chr16a . exon 57782 57843 . - . ID=Thaps10331.8;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=8 chr16a . CDS 57929 58467 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=7 chr16a . exon 57929 58467 . - . ID=Thaps10331.7;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=7 chr16a . CDS 59022 59476 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=6 chr16a . exon 59022 59476 . - . ID=Thaps10331.6;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=6 chr16a . CDS 59558 59990 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=5 chr16a . exon 59558 59990 . - . ID=Thaps10331.5;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=5 chr16a . CDS 60085 60684 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=4 chr16a . CDS 60783 61611 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=3 chr16a . CDS 61855 62216 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=2 chr16a . CDS 62350 63337 . - 0 ID=Thaps10331;Parent=Thaps10331;rank=1 chr16a . repeat_region 63605 63739 . - . description=TE2c_TP chr16a . repeat_region 65148 65155 . ? . description=dust chr16a . exon 60085 60684 . - . ID=Thaps10331.4;Parent=Thaps10331;constitutive=1;rank=4 chr16a . exon 60783 61611 . - . ID=Thaps10331.3;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . exon 61855 62216 . - . ID=Thaps10331.2;Parent=Thaps10331;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . exon 62350 63337 . - . ID=Thaps10331.1;Parent=Thaps10331;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 64093 65490 . - . ID=Thaps25097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC5];external_name=Thaps25097;logic_name=jgi_thaps3 chr16a ensembl transcript 64093 65490 . - . ID=Thaps25097;Parent=Thaps25097;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 64093 65490 . - 0 ID=Thaps25097;Parent=Thaps25097;rank=1 chr16a . exon 64093 65490 . - . ID=Thaps25097.1;Parent=Thaps25097;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 66070 66996 . - . ID=Thaps25098;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC6];external_name=Thaps25098;logic_name=jgi_thaps3 chr16a ensembl transcript 66070 66996 . - . ID=Thaps25098;Parent=Thaps25098;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 66070 66996 . - 0 ID=Thaps25098;Parent=Thaps25098;rank=1 chr16a . exon 66070 66996 . - . ID=Thaps25098.1;Parent=Thaps25098;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 71867 73387 . + . ID=Thaps10336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC8];external_name=Thaps10336;logic_name=jgi_thaps3 chr16a ensembl transcript 71867 73387 . + . ID=Thaps10336;Parent=Thaps10336;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 71867 72564 . + 0 ID=Thaps10336;Parent=Thaps10336;rank=1 chr16a . exon 71867 72564 . + . ID=Thaps10336.1;Parent=Thaps10336;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 72696 73038 . + 0 ID=Thaps10336;Parent=Thaps10336;rank=2 chr16a . exon 72696 73038 . + . ID=Thaps10336.2;Parent=Thaps10336;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 73136 73387 . + 0 ID=Thaps10336;Parent=Thaps10336;rank=3 chr16a . exon 73136 73387 . + . ID=Thaps10336.3;Parent=Thaps10336;constitutive=1;rank=3 chr16a ensembl protein_coding_gene 73671 76967 . + . ID=Thaps10337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC9];external_name=Thaps10337;logic_name=jgi_thaps3 chr16a ensembl transcript 73671 76967 . + . ID=Thaps10337;Parent=Thaps10337;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 73671 73722 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=1 chr16a . exon 73671 73722 . + . ID=Thaps10337.1;Parent=Thaps10337;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 73742 73898 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=2 chr16a . exon 73742 73898 . + . ID=Thaps10337.2;Parent=Thaps10337;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 73988 74298 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=3 chr16a . exon 73988 74298 . + . ID=Thaps10337.3;Parent=Thaps10337;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 74380 74558 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=4 chr16a . exon 74380 74558 . + . ID=Thaps10337.4;Parent=Thaps10337;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 74661 75065 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=5 chr16a . exon 74661 75065 . + . ID=Thaps10337.5;Parent=Thaps10337;constitutive=1;rank=5 chr16a . CDS 75197 75217 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=6 chr16a . exon 75197 75217 . + . ID=Thaps10337.6;Parent=Thaps10337;constitutive=1;rank=6 chr16a . CDS 75309 75707 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=7 chr16a . exon 75309 75707 . + . ID=Thaps10337.7;Parent=Thaps10337;constitutive=1;rank=7 chr16a . CDS 75837 75905 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=8 chr16a . exon 75837 75905 . + . ID=Thaps10337.8;Parent=Thaps10337;constitutive=1;rank=8 chr16a . CDS 75990 76742 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=9 chr16a . exon 75990 76742 . + . ID=Thaps10337.9;Parent=Thaps10337;constitutive=1;rank=9 chr16a . CDS 76857 76967 . + 0 ID=Thaps10337;Parent=Thaps10337;rank=10 chr16a . exon 76857 76967 . + . ID=Thaps10337.10;Parent=Thaps10337;constitutive=1;rank=10 chr16a ensembl protein_coding_gene 70217 71284 . - . ID=Thaps25100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCC7];external_name=Thaps25100;logic_name=jgi_thaps3 chr16a ensembl transcript 70217 71284 . - . ID=Thaps25100;Parent=Thaps25100;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 70217 71284 . - 0 ID=Thaps25100;Parent=Thaps25100;rank=1 chr16a . exon 70217 71284 . - . ID=Thaps25100.1;Parent=Thaps25100;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 77221 81450 . - . ID=Thaps25101;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD0];external_name=Thaps25101;logic_name=jgi_thaps3 chr16a ensembl transcript 77221 81450 . - . ID=Thaps25101;Parent=Thaps25101;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 77221 77372 . - 0 ID=Thaps25101;Parent=Thaps25101;rank=5 chr16a . exon 77221 77372 . - . ID=Thaps25101.5;Parent=Thaps25101;constitutive=1;ensembl_end_phase=2;rank=5 chr16a . CDS 77459 77811 . - 0 ID=Thaps25101;Parent=Thaps25101;rank=4 chr16a . exon 77459 77811 . - . ID=Thaps25101.4;Parent=Thaps25101;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 77959 78070 . - 0 ID=Thaps25101;Parent=Thaps25101;rank=3 chr16a . exon 77959 78070 . - . ID=Thaps25101.3;Parent=Thaps25101;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 78157 80634 . - 0 ID=Thaps25101;Parent=Thaps25101;rank=2 chr16a . exon 78157 80634 . - . ID=Thaps25101.2;Parent=Thaps25101;constitutive=1;rank=2 chr16a . CDS 80724 81450 . - 0 ID=Thaps25101;Parent=Thaps25101;rank=1 chr16a . repeat_region 81792 81895 . - . description=Copia1LTR_TP chr16a . repeat_region 89081 89088 . ? . description=dust chr16a . repeat_region 89800 89862 . ? . description=dust chr16a ensembl protein_coding_gene 82175 84004 . - . ID=Thaps10339;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD1];external_name=Thaps10339;logic_name=jgi_thaps3 chr16a ensembl transcript 82175 84004 . - . ID=Thaps10339;Parent=Thaps10339;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 82175 84004 . - 0 ID=Thaps10339;Parent=Thaps10339;rank=1 chr16a . exon 82175 84004 . - . ID=Thaps10339.1;Parent=Thaps10339;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 84646 86688 . + . ID=Thaps10340;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD2];external_name=Thaps10340;logic_name=jgi_thaps3 chr16a ensembl transcript 84646 86688 . + . ID=Thaps10340;Parent=Thaps10340;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 84646 86688 . + 0 ID=Thaps10340;Parent=Thaps10340;rank=1 chr16a . exon 84646 86688 . + . ID=Thaps10340.1;Parent=Thaps10340;constitutive=1;rank=1 chr16a . exon 80724 81450 . - . ID=Thaps25101.1;Parent=Thaps25101;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 87915 89558 . + . ID=Thaps25102;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD3];external_name=Thaps25102;logic_name=jgi_thaps3 chr16a ensembl transcript 87915 89558 . + . ID=Thaps25102;Parent=Thaps25102;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 87915 89558 . + 0 ID=Thaps25102;Parent=Thaps25102;rank=1 chr16a . exon 87915 89558 . + . ID=Thaps25102.1;Parent=Thaps25102;constitutive=1;rank=1 chr16a . repeat_region 92237 92300 . ? . description=trf chr16a . repeat_region 92247 92314 . ? . description=trf chr16a . repeat_region 96312 96375 . ? . description=trf chr16a . repeat_region 98161 98445 . ? . description=trf chr16a . repeat_region 98866 98887 . ? . description=trf chr16a ensembl protein_coding_gene 91923 92633 . + . ID=Thaps10343;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD4];external_name=Thaps10343;logic_name=jgi_thaps3 chr16a ensembl transcript 91923 92633 . + . ID=Thaps10343;Parent=Thaps10343;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 91923 92633 . + 0 ID=Thaps10343;Parent=Thaps10343;rank=1 chr16a . exon 91923 92633 . + . ID=Thaps10343.1;Parent=Thaps10343;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 95653 96874 . - . ID=Thaps10345;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD6];external_name=Thaps10345;logic_name=jgi_thaps3 chr16a ensembl transcript 95653 96874 . - . ID=Thaps10345;Parent=Thaps10345;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 95653 95821 . - 0 ID=Thaps10345;Parent=Thaps10345;rank=4 chr16a . exon 95653 95821 . - . ID=Thaps10345.4;Parent=Thaps10345;constitutive=1;ensembl_end_phase=1;rank=4 chr16a . CDS 96073 96593 . - 0 ID=Thaps10345;Parent=Thaps10345;rank=3 chr16a . exon 96073 96593 . - . ID=Thaps10345.3;Parent=Thaps10345;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 96692 96741 . - 0 ID=Thaps10345;Parent=Thaps10345;rank=2 chr16a . exon 96692 96741 . - . ID=Thaps10345.2;Parent=Thaps10345;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 96820 96874 . - 0 ID=Thaps10345;Parent=Thaps10345;rank=1 chr16a . exon 96820 96874 . - . ID=Thaps10345.1;Parent=Thaps10345;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 98080 98866 . - . ID=Thaps10346;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD7];external_name=Thaps10346;logic_name=jgi_thaps3 chr16a ensembl transcript 98080 98866 . - . ID=Thaps10346;Parent=Thaps10346;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 98080 98732 . - 0 ID=Thaps10346;Parent=Thaps10346;rank=2 chr16a . exon 98080 98732 . - . ID=Thaps10346.2;Parent=Thaps10346;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 98818 98866 . - 0 ID=Thaps10346;Parent=Thaps10346;rank=1 chr16a . exon 98818 98866 . - . ID=Thaps10346.1;Parent=Thaps10346;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 92736 95408 . - . ID=Thaps25104;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD5];external_name=Thaps25104;logic_name=jgi_thaps3 chr16a ensembl transcript 92736 95408 . - . ID=Thaps25104;Parent=Thaps25104;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 92736 95408 . - 0 ID=Thaps25104;Parent=Thaps25104;rank=1 chr16a . exon 92736 95408 . - . ID=Thaps25104.1;Parent=Thaps25104;constitutive=1;rank=1 chr16a . repeat_region 104389 104397 . ? . description=dust chr16a . repeat_region 104458 104465 . ? . description=dust chr16a ensembl protein_coding_gene 101626 103080 . + . ID=Thaps10348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD9];external_name=Thaps10348;logic_name=jgi_thaps3 chr16a ensembl transcript 101626 103080 . + . ID=Thaps10348;Parent=Thaps10348;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 101626 101641 . + 0 ID=Thaps10348;Parent=Thaps10348;rank=1 chr16a . exon 101626 101641 . + . ID=Thaps10348.1;Parent=Thaps10348;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 101739 101887 . + 0 ID=Thaps10348;Parent=Thaps10348;rank=2 chr16a . exon 101739 101887 . + . ID=Thaps10348.2;Parent=Thaps10348;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 101983 102715 . + 0 ID=Thaps10348;Parent=Thaps10348;rank=3 chr16a . exon 101983 102715 . + . ID=Thaps10348.3;Parent=Thaps10348;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 102792 102858 . + 0 ID=Thaps10348;Parent=Thaps10348;rank=4 chr16a . exon 102792 102858 . + . ID=Thaps10348.4;Parent=Thaps10348;constitutive=1;ensembl_end_phase=1;rank=4 chr16a . CDS 102960 103080 . + 0 ID=Thaps10348;Parent=Thaps10348;rank=5 chr16a . exon 102960 103080 . + . ID=Thaps10348.5;Parent=Thaps10348;constitutive=1;ensembl_end_phase=1;rank=5 chr16a ensembl protein_coding_gene 103918 105689 . + . ID=Thaps10349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE0];external_name=Thaps10349;logic_name=jgi_thaps3 chr16a ensembl transcript 103918 105689 . + . ID=Thaps10349;Parent=Thaps10349;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 103918 104189 . + 0 ID=Thaps10349;Parent=Thaps10349;rank=1 chr16a . exon 103918 104189 . + . ID=Thaps10349.1;Parent=Thaps10349;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 104411 105689 . + 0 ID=Thaps10349;Parent=Thaps10349;rank=2 chr16a . exon 104411 105689 . + . ID=Thaps10349.2;Parent=Thaps10349;constitutive=1;ensembl_end_phase=1;rank=2 chr16a ensembl protein_coding_gene 105777 108986 . - . ID=Thaps25106;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE1];external_name=Thaps25106;logic_name=jgi_thaps3 chr16a ensembl transcript 105777 108986 . - . ID=Thaps25106;Parent=Thaps25106;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 105777 108986 . - 0 ID=Thaps25106;Parent=Thaps25106;rank=1 chr16a . exon 105777 108986 . - . ID=Thaps25106.1;Parent=Thaps25106;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 109838 112174 . + . ID=Thaps25107;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE2];external_name=Thaps25107;logic_name=jgi_thaps3 chr16a ensembl transcript 109838 112174 . + . ID=Thaps25107;Parent=Thaps25107;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 109838 112174 . + 0 ID=Thaps25107;Parent=Thaps25107;rank=1 chr16a . exon 109838 112174 . + . ID=Thaps25107.1;Parent=Thaps25107;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 100010 100975 . - . ID=Thaps30178;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCD8];external_name=Thaps30178;logic_name=jgi_thaps3 chr16a ensembl transcript 100010 100975 . - . ID=Thaps30178;Parent=Thaps30178;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 100010 100051 . - 0 ID=Thaps30178;Parent=Thaps30178;rank=3 chr16a . exon 100010 100051 . - . ID=Thaps30178.3;Parent=Thaps30178;constitutive=1;rank=3 chr16a . CDS 100134 100632 . - 0 ID=Thaps30178;Parent=Thaps30178;rank=2 chr16a . exon 100134 100632 . - . ID=Thaps30178.2;Parent=Thaps30178;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 100764 100975 . - 0 ID=Thaps30178;Parent=Thaps30178;rank=1 chr16a . exon 100764 100975 . - . ID=Thaps30178.1;Parent=Thaps30178;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . repeat_region 110842 110869 . ? . description=trf chr16a ensembl protein_coding_gene 112602 115595 . + . ID=Thaps10352;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE3];external_name=Thaps10352;logic_name=jgi_thaps3 chr16a ensembl transcript 112602 115595 . + . ID=Thaps10352;Parent=Thaps10352;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 112602 113703 . + 0 ID=Thaps10352;Parent=Thaps10352;rank=1 chr16a . exon 112602 113703 . + . ID=Thaps10352.1;Parent=Thaps10352;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 113786 114153 . + 0 ID=Thaps10352;Parent=Thaps10352;rank=2 chr16a . exon 113786 114153 . + . ID=Thaps10352.2;Parent=Thaps10352;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 114255 115595 . + 0 ID=Thaps10352;Parent=Thaps10352;rank=3 chr16a . exon 114255 115595 . + . ID=Thaps10352.3;Parent=Thaps10352;constitutive=1;rank=3 chr16a ensembl protein_coding_gene 115708 117387 . - . ID=Thaps10353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE4];external_name=Thaps10353;logic_name=jgi_thaps3 chr16a ensembl transcript 115708 117387 . - . ID=Thaps10353;Parent=Thaps10353;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 115708 117051 . - 0 ID=Thaps10353;Parent=Thaps10353;rank=2 chr16a . exon 115708 117051 . - . ID=Thaps10353.2;Parent=Thaps10353;constitutive=1;rank=2 chr16a . CDS 117325 117387 . - 0 ID=Thaps10353;Parent=Thaps10353;rank=1 chr16a . exon 117325 117387 . - . ID=Thaps10353.1;Parent=Thaps10353;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 117583 119666 . - . ID=Thaps25108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE5];external_name=Thaps25108;logic_name=jgi_thaps3 chr16a ensembl transcript 117583 119666 . - . ID=Thaps25108;Parent=Thaps25108;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 117583 118214 . - 0 ID=Thaps25108;Parent=Thaps25108;rank=4 chr16a . exon 117583 118214 . - . ID=Thaps25108.4;Parent=Thaps25108;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 118313 118679 . - 0 ID=Thaps25108;Parent=Thaps25108;rank=3 chr16a . exon 118313 118679 . - . ID=Thaps25108.3;Parent=Thaps25108;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 118867 119217 . - 0 ID=Thaps25108;Parent=Thaps25108;rank=2 chr16a . exon 118867 119217 . - . ID=Thaps25108.2;Parent=Thaps25108;constitutive=1;rank=2 chr16a . CDS 119337 119666 . - 0 ID=Thaps25108;Parent=Thaps25108;rank=1 chr16a . exon 119337 119666 . - . ID=Thaps25108.1;Parent=Thaps25108;constitutive=1;rank=1 chr16a . repeat_region 124488 124532 . ? . description=dust chr16a . repeat_region 125375 125382 . ? . description=dust chr16a ensembl protein_coding_gene 120139 122352 . + . ID=Thaps10355;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE6];external_name=Thaps10355;logic_name=jgi_thaps3 chr16a ensembl transcript 120139 122352 . + . ID=Thaps10355;Parent=Thaps10355;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 120139 120265 . + 0 ID=Thaps10355;Parent=Thaps10355;rank=1 chr16a . exon 120139 120265 . + . ID=Thaps10355.1;Parent=Thaps10355;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 120424 120644 . + 0 ID=Thaps10355;Parent=Thaps10355;rank=2 chr16a . exon 120424 120644 . + . ID=Thaps10355.2;Parent=Thaps10355;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 120775 122352 . + 0 ID=Thaps10355;Parent=Thaps10355;rank=3 chr16a . exon 120775 122352 . + . ID=Thaps10355.3;Parent=Thaps10355;constitutive=1;rank=3 chr16a ensembl protein_coding_gene 129779 130424 . + . ID=Thaps10358;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE9];external_name=Thaps10358;logic_name=jgi_thaps3 chr16a ensembl transcript 129779 130424 . + . ID=Thaps10358;Parent=Thaps10358;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 129779 130064 . + 0 ID=Thaps10358;Parent=Thaps10358;rank=1 chr16a . exon 129779 130064 . + . ID=Thaps10358.1;Parent=Thaps10358;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 130204 130424 . + 0 ID=Thaps10358;Parent=Thaps10358;rank=2 chr16a ensembl protein_coding_gene 122951 123817 . - . ID=Thaps17036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE7];external_name=Thaps17036;logic_name=jgi_thaps3 chr16a ensembl transcript 122951 123817 . - . ID=Thaps17036;Parent=Thaps17036;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 122951 123234 . - 0 ID=Thaps17036;Parent=Thaps17036;rank=2 chr16a . exon 122951 123234 . - . ID=Thaps17036.2;Parent=Thaps17036;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 123334 123817 . - 0 ID=Thaps17036;Parent=Thaps17036;rank=1 chr16a . exon 123334 123817 . - . ID=Thaps17036.1;Parent=Thaps17036;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 126173 128341 . - . ID=Thaps25110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCE8];external_name=Thaps25110;logic_name=jgi_thaps3 chr16a ensembl transcript 126173 128341 . - . ID=Thaps25110;Parent=Thaps25110;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 126173 128341 . - 0 ID=Thaps25110;Parent=Thaps25110;rank=1 chr16a . exon 126173 128341 . - . ID=Thaps25110.1;Parent=Thaps25110;constitutive=1;rank=1 chr16a . repeat_region 135058 135122 . ? . description=trf chr16a . repeat_region 135090 135117 . ? . description=trf chr16a . repeat_region 138036 138111 . ? . description=trf chr16a . exon 130204 130424 . + . ID=Thaps10358.2;Parent=Thaps10358;constitutive=1;ensembl_end_phase=2;rank=2 chr16a ensembl protein_coding_gene 136494 137493 . + . ID=Thaps10360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCF1];external_name=Thaps10360;logic_name=jgi_thaps3 chr16a ensembl transcript 136494 137493 . + . ID=Thaps10360;Parent=Thaps10360;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 136494 137159 . + 0 ID=Thaps10360;Parent=Thaps10360;rank=1 chr16a . exon 136494 137159 . + . ID=Thaps10360.1;Parent=Thaps10360;constitutive=1;rank=1 chr16a . CDS 137263 137493 . + 0 ID=Thaps10360;Parent=Thaps10360;rank=2 chr16a . exon 137263 137493 . + . ID=Thaps10360.2;Parent=Thaps10360;constitutive=1;rank=2 chr16a ensembl protein_coding_gene 131335 134186 . + . ID=Thaps25111;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCF0];external_name=Thaps25111;logic_name=jgi_thaps3 chr16a ensembl transcript 131335 134186 . + . ID=Thaps25111;Parent=Thaps25111;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 131335 132062 . + 0 ID=Thaps25111;Parent=Thaps25111;rank=1 chr16a . exon 131335 132062 . + . ID=Thaps25111.1;Parent=Thaps25111;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 132189 133263 . + 0 ID=Thaps25111;Parent=Thaps25111;rank=2 chr16a . exon 132189 133263 . + . ID=Thaps25111.2;Parent=Thaps25111;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 133349 133810 . + 0 ID=Thaps25111;Parent=Thaps25111;rank=3 chr16a . exon 133349 133810 . + . ID=Thaps25111.3;Parent=Thaps25111;constitutive=1;rank=3 chr16a . CDS 133914 134186 . + 0 ID=Thaps25111;Parent=Thaps25111;rank=4 chr16a . exon 133914 134186 . + . ID=Thaps25111.4;Parent=Thaps25111;constitutive=1;rank=4 chr16a ensembl protein_coding_gene 138122 139099 . + . ID=Thaps25112;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCF2];external_name=Thaps25112;logic_name=jgi_thaps3 chr16a ensembl transcript 138122 139099 . + . ID=Thaps25112;Parent=Thaps25112;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 138122 138387 . + 0 ID=Thaps25112;Parent=Thaps25112;rank=1 chr16a . exon 138122 138387 . + . ID=Thaps25112.1;Parent=Thaps25112;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 138490 139099 . + 0 ID=Thaps25112;Parent=Thaps25112;rank=2 chr16a . exon 138490 139099 . + . ID=Thaps25112.2;Parent=Thaps25112;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . repeat_region 140353 140375 . ? . description=dust chr16a . repeat_region 149425 149433 . ? . description=dust chr16a ensembl protein_coding_gene 141416 143102 . + . ID=Thaps10363;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCF4];external_name=Thaps10363;logic_name=jgi_thaps3 chr16a ensembl transcript 141416 143102 . + . ID=Thaps10363;Parent=Thaps10363;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 141416 142066 . + 0 ID=Thaps10363;Parent=Thaps10363;rank=1 chr16a . exon 141416 142066 . + . ID=Thaps10363.1;Parent=Thaps10363;constitutive=1;rank=1 chr16a . CDS 142145 142271 . + 0 ID=Thaps10363;Parent=Thaps10363;rank=2 chr16a . exon 142145 142271 . + . ID=Thaps10363.2;Parent=Thaps10363;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 142354 142461 . + 0 ID=Thaps10363;Parent=Thaps10363;rank=3 chr16a . exon 142354 142461 . + . ID=Thaps10363.3;Parent=Thaps10363;constitutive=1;rank=3 chr16a . CDS 142558 143102 . + 0 ID=Thaps10363;Parent=Thaps10363;rank=4 chr16a . exon 142558 143102 . + . ID=Thaps10363.4;Parent=Thaps10363;constitutive=1;ensembl_end_phase=2;rank=4 chr16a ensembl protein_coding_gene 149715 150985 . - . ID=Thaps25115;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCF6];external_name=Thaps25115;logic_name=jgi_thaps3 chr16a ensembl transcript 149715 150985 . - . ID=Thaps25115;Parent=Thaps25115;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 149715 149983 . - 0 ID=Thaps25115;Parent=Thaps25115;rank=3 chr16a . exon 149715 149983 . - . ID=Thaps25115.3;Parent=Thaps25115;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 150139 150265 . - 0 ID=Thaps25115;Parent=Thaps25115;rank=2 chr16a . CDS 150401 150985 . - 0 ID=Thaps25115;Parent=Thaps25115;rank=1 chr16a ensembl protein_coding_gene 144815 147253 . + . ID=Thaps264357;biotype=protein_coding;description=Copper transporter%2C ATP dependent [Source:UniProtKB/TrEMBL%3BAcc:B8LCF5];external_name=Thaps264357;logic_name=jgi_thaps3 chr16a ensembl transcript 144815 147253 . + . ID=Thaps264357;Parent=Thaps264357;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 144815 144993 . + 0 ID=Thaps264357;Parent=Thaps264357;rank=1 chr16a . exon 144815 144993 . + . ID=Thaps264357.1;Parent=Thaps264357;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 145063 145222 . + 0 ID=Thaps264357;Parent=Thaps264357;rank=2 chr16a . exon 145063 145222 . + . ID=Thaps264357.2;Parent=Thaps264357;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 145264 145299 . + 0 ID=Thaps264357;Parent=Thaps264357;rank=3 chr16a . exon 145264 145299 . + . ID=Thaps264357.3;Parent=Thaps264357;constitutive=1;rank=3 chr16a . CDS 145337 145424 . + 0 ID=Thaps264357;Parent=Thaps264357;rank=4 chr16a . exon 145337 145424 . + . ID=Thaps264357.4;Parent=Thaps264357;constitutive=1;ensembl_end_phase=1;rank=4 chr16a . CDS 145503 146002 . + 0 ID=Thaps264357;Parent=Thaps264357;rank=5 chr16a . exon 145503 146002 . + . ID=Thaps264357.5;Parent=Thaps264357;constitutive=1;ensembl_end_phase=2;rank=5 chr16a . CDS 146100 146148 . + 0 ID=Thaps264357;Parent=Thaps264357;rank=6 chr16a . exon 146100 146148 . + . ID=Thaps264357.6;Parent=Thaps264357;constitutive=1;ensembl_end_phase=1;rank=6 chr16a . CDS 146215 146492 . + 0 ID=Thaps264357;Parent=Thaps264357;rank=7 chr16a . exon 146215 146492 . + . ID=Thaps264357.7;Parent=Thaps264357;constitutive=1;ensembl_end_phase=2;rank=7 chr16a . CDS 146520 147253 . + 0 ID=Thaps264357;Parent=Thaps264357;rank=8 chr16a . exon 146520 147253 . + . ID=Thaps264357.8;Parent=Thaps264357;constitutive=1;ensembl_end_phase=2;rank=8 chr16a ensembl protein_coding_gene 140215 140586 . - . ID=Thaps37809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCF3];external_name=Thaps37809;logic_name=jgi_thaps3 chr16a ensembl transcript 140215 140586 . - . ID=Thaps37809;Parent=Thaps37809;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 140215 140586 . - 0 ID=Thaps37809;Parent=Thaps37809;rank=1 chr16a . exon 140215 140586 . - . ID=Thaps37809.1;Parent=Thaps37809;constitutive=1;rank=1 chr16a . repeat_region 150613 150648 . ? . description=trf chr16a ensembl protein_coding_gene 151277 152290 . - . ID=Thaps10366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCF7];external_name=Thaps10366;logic_name=jgi_thaps3 chr16a ensembl transcript 151277 152290 . - . ID=Thaps10366;Parent=Thaps10366;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 151277 152290 . - 0 ID=Thaps10366;Parent=Thaps10366;rank=1 chr16a . exon 151277 152290 . - . ID=Thaps10366.1;Parent=Thaps10366;constitutive=1;rank=1 chr16a . exon 150139 150265 . - . ID=Thaps25115.2;Parent=Thaps25115;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . exon 150401 150985 . - . ID=Thaps25115.1;Parent=Thaps25115;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 152794 154349 . + . ID=Thaps25116;biotype=protein_coding;description=Phosphoglycerate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8LCF8];external_name=PGK5;logic_name=jgi_thaps3 chr16a ensembl transcript 152794 154349 . + . ID=Thaps25116;Parent=Thaps25116;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 152794 153513 . + 0 ID=Thaps25116;Parent=Thaps25116;rank=1 chr16a . exon 152794 153513 . + . ID=Thaps25116.1;Parent=Thaps25116;constitutive=1;rank=1 chr16a . CDS 153592 153679 . + 0 ID=Thaps25116;Parent=Thaps25116;rank=2 chr16a . exon 153592 153679 . + . ID=Thaps25116.2;Parent=Thaps25116;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 153763 154149 . + 0 ID=Thaps25116;Parent=Thaps25116;rank=3 chr16a . exon 153763 154149 . + . ID=Thaps25116.3;Parent=Thaps25116;constitutive=1;rank=3 chr16a . CDS 154231 154349 . + 0 ID=Thaps25116;Parent=Thaps25116;rank=4 chr16a . exon 154231 154349 . + . ID=Thaps25116.4;Parent=Thaps25116;constitutive=1;ensembl_end_phase=2;rank=4 chr16a ensembl protein_coding_gene 154775 156929 . - . ID=Thaps269863;biotype=protein_coding;description=Metalloprotease [Source:UniProtKB/TrEMBL%3BAcc:B8LCF9];external_name=Thaps269863;logic_name=jgi_thaps3 chr16a ensembl transcript 154775 156929 . - . ID=Thaps269863;Parent=Thaps269863;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 154775 155557 . - 0 ID=Thaps269863;Parent=Thaps269863;rank=4 chr16a . exon 154775 155557 . - . ID=Thaps269863.4;Parent=Thaps269863;constitutive=1;rank=4 chr16a . CDS 155634 156491 . - 0 ID=Thaps269863;Parent=Thaps269863;rank=3 chr16a . exon 155634 156491 . - . ID=Thaps269863.3;Parent=Thaps269863;constitutive=1;rank=3 chr16a . CDS 156507 156793 . - 0 ID=Thaps269863;Parent=Thaps269863;rank=2 chr16a . exon 156507 156793 . - . ID=Thaps269863.2;Parent=Thaps269863;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 156893 156929 . - 0 ID=Thaps269863;Parent=Thaps269863;rank=1 chr16a . exon 156893 156929 . - . ID=Thaps269863.1;Parent=Thaps269863;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 158102 160777 . + . ID=Thaps30193;biotype=protein_coding;description=Urease [Source:UniProtKB/TrEMBL%3BAcc:B8LCG0];external_name=URE;logic_name=jgi_thaps3 chr16a ensembl transcript 158102 160777 . + . ID=Thaps30193;Parent=Thaps30193;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 158102 158132 . + 0 ID=Thaps30193;Parent=Thaps30193;rank=1 chr16a . exon 158102 158132 . + . ID=Thaps30193.1;Parent=Thaps30193;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 158214 158435 . + 0 ID=Thaps30193;Parent=Thaps30193;rank=2 chr16a . exon 158214 158435 . + . ID=Thaps30193.2;Parent=Thaps30193;constitutive=1;rank=2 chr16a . CDS 158523 159907 . + 0 ID=Thaps30193;Parent=Thaps30193;rank=3 chr16a . exon 158523 159907 . + . ID=Thaps30193.3;Parent=Thaps30193;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 159992 160777 . + 0 ID=Thaps30193;Parent=Thaps30193;rank=4 chr16a . repeat_region 161524 161531 . ? . description=dust chr16a . repeat_region 169468 169478 . ? . description=dust chr16a ensembl protein_coding_gene 165675 166491 . - . ID=Thaps10371;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCG2];external_name=Thaps10371;logic_name=jgi_thaps3 chr16a ensembl transcript 165675 166491 . - . ID=Thaps10371;Parent=Thaps10371;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 165675 166297 . - 0 ID=Thaps10371;Parent=Thaps10371;rank=2 chr16a . exon 165675 166297 . - . ID=Thaps10371.2;Parent=Thaps10371;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 166329 166491 . - 0 ID=Thaps10371;Parent=Thaps10371;rank=1 chr16a . exon 166329 166491 . - . ID=Thaps10371.1;Parent=Thaps10371;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 161087 161374 . - . ID=Thaps19649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCG1];external_name=Thaps19649;logic_name=jgi_thaps3 chr16a ensembl transcript 161087 161374 . - . ID=Thaps19649;Parent=Thaps19649;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 161087 161374 . - 0 ID=Thaps19649;Parent=Thaps19649;rank=1 chr16a . exon 161087 161374 . - . ID=Thaps19649.1;Parent=Thaps19649;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 166796 169354 . + . ID=Thaps25120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCG3];external_name=Thaps25120;logic_name=jgi_thaps3 chr16a ensembl transcript 166796 169354 . + . ID=Thaps25120;Parent=Thaps25120;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 166796 166876 . + 0 ID=Thaps25120;Parent=Thaps25120;rank=1 chr16a . exon 166796 166876 . + . ID=Thaps25120.1;Parent=Thaps25120;constitutive=1;rank=1 chr16a . CDS 167097 167611 . + 0 ID=Thaps25120;Parent=Thaps25120;rank=2 chr16a . exon 167097 167611 . + . ID=Thaps25120.2;Parent=Thaps25120;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 167647 169354 . + 0 ID=Thaps25120;Parent=Thaps25120;rank=3 chr16a . exon 167647 169354 . + . ID=Thaps25120.3;Parent=Thaps25120;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . exon 159992 160777 . + . ID=Thaps30193.4;Parent=Thaps30193;constitutive=1;rank=4 chr16a . repeat_region 171722 171779 . ? . description=trf chr16a . repeat_region 172605 172638 . ? . description=trf chr16a ensembl protein_coding_gene 172057 173048 . + . ID=Thaps10374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCG5];external_name=Thaps10374;logic_name=jgi_thaps3 chr16a ensembl transcript 172057 173048 . + . ID=Thaps10374;Parent=Thaps10374;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 172057 172441 . + 0 ID=Thaps10374;Parent=Thaps10374;rank=1 chr16a . exon 172057 172441 . + . ID=Thaps10374.1;Parent=Thaps10374;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 172549 173048 . + 0 ID=Thaps10374;Parent=Thaps10374;rank=2 chr16a . exon 172549 173048 . + . ID=Thaps10374.2;Parent=Thaps10374;constitutive=1;ensembl_end_phase=2;rank=2 chr16a ensembl protein_coding_gene 170260 171681 . + . ID=Thaps25121;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCG4];external_name=Thaps25121;logic_name=jgi_thaps3 chr16a ensembl transcript 170260 171681 . + . ID=Thaps25121;Parent=Thaps25121;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 170260 171681 . + 0 ID=Thaps25121;Parent=Thaps25121;rank=1 chr16a . exon 170260 171681 . + . ID=Thaps25121.1;Parent=Thaps25121;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 175506 176884 . - . ID=Thaps25122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCG6];external_name=Thaps25122;logic_name=jgi_thaps3 chr16a ensembl transcript 175506 176884 . - . ID=Thaps25122;Parent=Thaps25122;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 175506 176297 . - 0 ID=Thaps25122;Parent=Thaps25122;rank=2 chr16a . exon 175506 176297 . - . ID=Thaps25122.2;Parent=Thaps25122;constitutive=1;rank=2 chr16a . CDS 176477 176884 . - 0 ID=Thaps25122;Parent=Thaps25122;rank=1 chr16a . exon 176477 176884 . - . ID=Thaps25122.1;Parent=Thaps25122;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 178411 180132 . + . ID=Thaps25123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCG7];external_name=Thaps25123;logic_name=jgi_thaps3 chr16a ensembl transcript 178411 180132 . + . ID=Thaps25123;Parent=Thaps25123;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 178411 180132 . + 0 ID=Thaps25123;Parent=Thaps25123;rank=1 chr16a . exon 178411 180132 . + . ID=Thaps25123.1;Parent=Thaps25123;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 182262 183170 . + . ID=Thaps10378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCG9];external_name=Thaps10378;logic_name=jgi_thaps3 chr16a ensembl transcript 182262 183170 . + . ID=Thaps10378;Parent=Thaps10378;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 182262 183170 . + 0 ID=Thaps10378;Parent=Thaps10378;rank=1 chr16a . exon 182262 183170 . + . ID=Thaps10378.1;Parent=Thaps10378;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 184564 186352 . + . ID=Thaps10379;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCH0];external_name=Thaps10379;logic_name=jgi_thaps3 chr16a ensembl transcript 184564 186352 . + . ID=Thaps10379;Parent=Thaps10379;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 184564 184611 . + 0 ID=Thaps10379;Parent=Thaps10379;rank=1 chr16a . exon 184564 184611 . + . ID=Thaps10379.1;Parent=Thaps10379;constitutive=1;rank=1 chr16a . CDS 184895 185669 . + 0 ID=Thaps10379;Parent=Thaps10379;rank=2 chr16a . exon 184895 185669 . + . ID=Thaps10379.2;Parent=Thaps10379;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 185868 186352 . + 0 ID=Thaps10379;Parent=Thaps10379;rank=3 chr16a . exon 185868 186352 . + . ID=Thaps10379.3;Parent=Thaps10379;constitutive=1;ensembl_end_phase=2;rank=3 chr16a ensembl protein_coding_gene 189349 193101 . - . ID=Thaps10381;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCH2];external_name=Thaps10381;logic_name=jgi_thaps3 chr16a ensembl transcript 189349 193101 . - . ID=Thaps10381;Parent=Thaps10381;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 189349 193101 . - 0 ID=Thaps10381;Parent=Thaps10381;rank=1 chr16a . exon 189349 193101 . - . ID=Thaps10381.1;Parent=Thaps10381;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 180854 181883 . + . ID=Thaps25124;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCG8];external_name=Thaps25124;logic_name=jgi_thaps3 chr16a ensembl transcript 180854 181883 . + . ID=Thaps25124;Parent=Thaps25124;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 180854 180863 . + 0 ID=Thaps25124;Parent=Thaps25124;rank=1 chr16a . exon 180854 180863 . + . ID=Thaps25124.1;Parent=Thaps25124;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 180910 181183 . + 0 ID=Thaps25124;Parent=Thaps25124;rank=2 chr16a . exon 180910 181183 . + . ID=Thaps25124.2;Parent=Thaps25124;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 181482 181743 . + 0 ID=Thaps25124;Parent=Thaps25124;rank=3 chr16a . exon 181482 181743 . + . ID=Thaps25124.3;Parent=Thaps25124;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 181821 181883 . + 0 ID=Thaps25124;Parent=Thaps25124;rank=4 chr16a . exon 181821 181883 . + . ID=Thaps25124.4;Parent=Thaps25124;constitutive=1;rank=4 chr16a ensembl protein_coding_gene 186969 189168 . + . ID=Thaps25125;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCH1];external_name=Thaps25125;logic_name=jgi_thaps3 chr16a ensembl transcript 186969 189168 . + . ID=Thaps25125;Parent=Thaps25125;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 186969 187268 . + 0 ID=Thaps25125;Parent=Thaps25125;rank=1 chr16a . exon 186969 187268 . + . ID=Thaps25125.1;Parent=Thaps25125;constitutive=1;rank=1 chr16a . CDS 187406 187822 . + 0 ID=Thaps25125;Parent=Thaps25125;rank=2 chr16a . exon 187406 187822 . + . ID=Thaps25125.2;Parent=Thaps25125;constitutive=1;rank=2 chr16a . CDS 187907 187975 . + 0 ID=Thaps25125;Parent=Thaps25125;rank=3 chr16a . exon 187907 187975 . + . ID=Thaps25125.3;Parent=Thaps25125;constitutive=1;rank=3 chr16a . CDS 188052 188964 . + 0 ID=Thaps25125;Parent=Thaps25125;rank=4 chr16a . exon 188052 188964 . + . ID=Thaps25125.4;Parent=Thaps25125;constitutive=1;ensembl_end_phase=1;rank=4 chr16a . CDS 189047 189168 . + 0 ID=Thaps25125;Parent=Thaps25125;rank=5 chr16a . exon 189047 189168 . + . ID=Thaps25125.5;Parent=Thaps25125;constitutive=1;ensembl_end_phase=2;rank=5 chr16a . repeat_region 198691 198714 . ? . description=trf chr16a . repeat_region 199117 199226 . ? . description=trf chr16a ensembl protein_coding_gene 199187 200298 . - . ID=Thaps10383;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCH5];external_name=Thaps10383;logic_name=jgi_thaps3 chr16a ensembl transcript 199187 200298 . - . ID=Thaps10383;Parent=Thaps10383;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 199187 199906 . - 0 ID=Thaps10383;Parent=Thaps10383;rank=2 chr16a . exon 199187 199906 . - . ID=Thaps10383.2;Parent=Thaps10383;constitutive=1;rank=2 chr16a . CDS 200134 200298 . - 0 ID=Thaps10383;Parent=Thaps10383;rank=1 chr16a ensembl protein_coding_gene 193384 196149 . - . ID=Thaps264361;biotype=protein_coding;description=Aminopeptidase aminopeptidase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCH3];external_name=Thaps264361;logic_name=jgi_thaps3 chr16a ensembl transcript 193384 196149 . - . ID=Thaps264361;Parent=Thaps264361;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 193384 193805 . - 0 ID=Thaps264361;Parent=Thaps264361;rank=3 chr16a . exon 193384 193805 . - . ID=Thaps264361.3;Parent=Thaps264361;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 193821 195048 . - 0 ID=Thaps264361;Parent=Thaps264361;rank=2 chr16a . exon 193821 195048 . - . ID=Thaps264361.2;Parent=Thaps264361;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 195147 196149 . - 0 ID=Thaps264361;Parent=Thaps264361;rank=1 chr16a . exon 195147 196149 . - . ID=Thaps264361.1;Parent=Thaps264361;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 197675 198061 . - . ID=Thaps264362;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCH4];external_name=Thaps264362;logic_name=jgi_thaps3 chr16a ensembl transcript 197675 198061 . - . ID=Thaps264362;Parent=Thaps264362;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 197675 197873 . - 0 ID=Thaps264362;Parent=Thaps264362;rank=2 chr16a . exon 197675 197873 . - . ID=Thaps264362.2;Parent=Thaps264362;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 197931 198061 . - 0 ID=Thaps264362;Parent=Thaps264362;rank=1 chr16a . exon 197931 198061 . - . ID=Thaps264362.1;Parent=Thaps264362;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . repeat_region 209863 209913 . ? . description=dust chr16a . exon 200134 200298 . - . ID=Thaps10383.1;Parent=Thaps10383;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 202406 203171 . + . ID=Thaps10385;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCH7];external_name=Thaps10385;logic_name=jgi_thaps3 chr16a ensembl transcript 202406 203171 . + . ID=Thaps10385;Parent=Thaps10385;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 202406 202550 . + 0 ID=Thaps10385;Parent=Thaps10385;rank=1 chr16a . exon 202406 202550 . + . ID=Thaps10385.1;Parent=Thaps10385;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 202624 203171 . + 0 ID=Thaps10385;Parent=Thaps10385;rank=2 chr16a . exon 202624 203171 . + . ID=Thaps10385.2;Parent=Thaps10385;constitutive=1;ensembl_end_phase=2;rank=2 chr16a ensembl protein_coding_gene 206358 208369 . - . ID=Thaps25127;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCH9];external_name=Thaps25127;logic_name=jgi_thaps3 chr16a ensembl transcript 206358 208369 . - . ID=Thaps25127;Parent=Thaps25127;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 206358 206415 . - 0 ID=Thaps25127;Parent=Thaps25127;rank=3 chr16a . exon 206358 206415 . - . ID=Thaps25127.3;Parent=Thaps25127;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 206597 207932 . - 0 ID=Thaps25127;Parent=Thaps25127;rank=2 chr16a . exon 206597 207932 . - . ID=Thaps25127.2;Parent=Thaps25127;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 208045 208369 . - 0 ID=Thaps25127;Parent=Thaps25127;rank=1 chr16a . exon 208045 208369 . - . ID=Thaps25127.1;Parent=Thaps25127;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 208749 209919 . + . ID=Thaps25128;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCI0];external_name=Thaps25128;logic_name=jgi_thaps3 chr16a ensembl transcript 208749 209919 . + . ID=Thaps25128;Parent=Thaps25128;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 208749 208885 . + 0 ID=Thaps25128;Parent=Thaps25128;rank=1 chr16a . exon 208749 208885 . + . ID=Thaps25128.1;Parent=Thaps25128;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 209244 209457 . + 0 ID=Thaps25128;Parent=Thaps25128;rank=2 chr16a . exon 209244 209457 . + . ID=Thaps25128.2;Parent=Thaps25128;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 209584 209919 . + 0 ID=Thaps25128;Parent=Thaps25128;rank=3 chr16a . exon 209584 209919 . + . ID=Thaps25128.3;Parent=Thaps25128;constitutive=1;rank=3 chr16a ensembl protein_coding_gene 204845 206221 . + . ID=Thaps264364;biotype=protein_coding;description=Probable atp-nad kinase [Source:UniProtKB/TrEMBL%3BAcc:B8LCH8];external_name=Thaps264364;logic_name=jgi_thaps3 chr16a ensembl transcript 204845 206221 . + . ID=Thaps264364;Parent=Thaps264364;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 204845 205176 . + 0 ID=Thaps264364;Parent=Thaps264364;rank=1 chr16a . exon 204845 205176 . + . ID=Thaps264364.1;Parent=Thaps264364;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 205301 205324 . + 0 ID=Thaps264364;Parent=Thaps264364;rank=2 chr16a . exon 205301 205324 . + . ID=Thaps264364.2;Parent=Thaps264364;constitutive=1;rank=2 chr16a . CDS 205391 205566 . + 0 ID=Thaps264364;Parent=Thaps264364;rank=3 chr16a . exon 205391 205566 . + . ID=Thaps264364.3;Parent=Thaps264364;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 205806 206221 . + 0 ID=Thaps264364;Parent=Thaps264364;rank=4 chr16a . exon 205806 206221 . + . ID=Thaps264364.4;Parent=Thaps264364;constitutive=1;ensembl_end_phase=2;rank=4 chr16a ensembl protein_coding_gene 200531 202187 . + . ID=Thaps42577;biotype=protein_coding;description=Phosphoglycerate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8LCH6];external_name=PGK3;logic_name=jgi_thaps3 chr16a ensembl transcript 200531 202187 . + . ID=Thaps42577;Parent=Thaps42577;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 200531 200771 . + 0 ID=Thaps42577;Parent=Thaps42577;rank=1 chr16a . exon 200531 200771 . + . ID=Thaps42577.1;Parent=Thaps42577;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 200948 201312 . + 0 ID=Thaps42577;Parent=Thaps42577;rank=2 chr16a . exon 200948 201312 . + . ID=Thaps42577.2;Parent=Thaps42577;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 201388 201740 . + 0 ID=Thaps42577;Parent=Thaps42577;rank=3 chr16a . exon 201388 201740 . + . ID=Thaps42577.3;Parent=Thaps42577;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 201831 202000 . + 0 ID=Thaps42577;Parent=Thaps42577;rank=4 chr16a . exon 201831 202000 . + . ID=Thaps42577.4;Parent=Thaps42577;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 202096 202187 . + 0 ID=Thaps42577;Parent=Thaps42577;rank=5 chr16a . exon 202096 202187 . + . ID=Thaps42577.5;Parent=Thaps42577;constitutive=1;ensembl_end_phase=2;rank=5 chr16a ensembl protein_coding_gene 217221 218435 . + . ID=Thaps10391;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCI3];external_name=Thaps10391;logic_name=jgi_thaps3 chr16a ensembl transcript 217221 218435 . + . ID=Thaps10391;Parent=Thaps10391;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 217221 218435 . + 0 ID=Thaps10391;Parent=Thaps10391;rank=1 chr16a . exon 217221 218435 . + . ID=Thaps10391.1;Parent=Thaps10391;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 213213 216295 . - . ID=Thaps25129;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCI2];external_name=Thaps25129;logic_name=jgi_thaps3 chr16a ensembl transcript 213213 216295 . - . ID=Thaps25129;Parent=Thaps25129;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 213213 213343 . - 0 ID=Thaps25129;Parent=Thaps25129;rank=2 chr16a . exon 213213 213343 . - . ID=Thaps25129.2;Parent=Thaps25129;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 213382 216295 . - 0 ID=Thaps25129;Parent=Thaps25129;rank=1 chr16a . exon 213382 216295 . - . ID=Thaps25129.1;Parent=Thaps25129;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 218743 220298 . - . ID=Thaps25130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCI4];external_name=Thaps25130;logic_name=jgi_thaps3 chr16a ensembl transcript 218743 220298 . - . ID=Thaps25130;Parent=Thaps25130;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 218743 219229 . - 0 ID=Thaps25130;Parent=Thaps25130;rank=2 chr16a . exon 218743 219229 . - . ID=Thaps25130.2;Parent=Thaps25130;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 219379 220298 . - 0 ID=Thaps25130;Parent=Thaps25130;rank=1 chr16a . exon 219379 220298 . - . ID=Thaps25130.1;Parent=Thaps25130;constitutive=1;ensembl_end_phase=2;rank=1 chr16a ensembl protein_coding_gene 211117 212896 . + . ID=Thaps264365;biotype=protein_coding;description=Prolyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8LCI1];external_name=Thaps264365;logic_name=jgi_thaps3 chr16a ensembl transcript 211117 212896 . + . ID=Thaps264365;Parent=Thaps264365;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 211117 211189 . + 0 ID=Thaps264365;Parent=Thaps264365;rank=1 chr16a . exon 211117 211189 . + . ID=Thaps264365.1;Parent=Thaps264365;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 211377 212691 . + 0 ID=Thaps264365;Parent=Thaps264365;rank=2 chr16a . exon 211377 212691 . + . ID=Thaps264365.2;Parent=Thaps264365;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 212719 212896 . + 0 ID=Thaps264365;Parent=Thaps264365;rank=3 chr16a . exon 212719 212896 . + . ID=Thaps264365.3;Parent=Thaps264365;constitutive=1;ensembl_end_phase=1;rank=3 chr16a ensembl protein_coding_gene 224548 225071 . - . ID=Thaps10395;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCI7];external_name=Thaps10395;logic_name=jgi_thaps3 chr16a ensembl transcript 224548 225071 . - . ID=Thaps10395;Parent=Thaps10395;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 224548 224775 . - 0 ID=Thaps10395;Parent=Thaps10395;rank=2 chr16a . exon 224548 224775 . - . ID=Thaps10395.2;Parent=Thaps10395;constitutive=1;rank=2 chr16a . CDS 224889 225071 . - 0 ID=Thaps10395;Parent=Thaps10395;rank=1 chr16a . exon 224889 225071 . - . ID=Thaps10395.1;Parent=Thaps10395;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 227117 228601 . - . ID=Thaps10396;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCI8];external_name=Thaps10396;logic_name=jgi_thaps3 chr16a ensembl transcript 227117 228601 . - . ID=Thaps10396;Parent=Thaps10396;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 227117 228601 . - 0 ID=Thaps10396;Parent=Thaps10396;rank=1 chr16a . exon 227117 228601 . - . ID=Thaps10396.1;Parent=Thaps10396;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 229846 230838 . - . ID=Thaps10397;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCI9];external_name=Thaps10397;logic_name=jgi_thaps3 chr16a ensembl transcript 229846 230838 . - . ID=Thaps10397;Parent=Thaps10397;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 229846 230838 . - 0 ID=Thaps10397;Parent=Thaps10397;rank=1 chr16a . exon 229846 230838 . - . ID=Thaps10397.1;Parent=Thaps10397;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 221152 221535 . + . ID=Thaps264366;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCI5];external_name=Thaps264366;logic_name=jgi_thaps3 chr16a ensembl transcript 221152 221535 . + . ID=Thaps264366;Parent=Thaps264366;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 221152 221535 . + 0 ID=Thaps264366;Parent=Thaps264366;rank=1 chr16a . exon 221152 221535 . + . ID=Thaps264366.1;Parent=Thaps264366;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 222028 222744 . - . ID=Thaps269866;biotype=protein_coding;description=Glutathione s-transferase [Source:UniProtKB/TrEMBL%3BAcc:B8LCI6];external_name=Thaps269866;logic_name=jgi_thaps3 chr16a ensembl transcript 222028 222744 . - . ID=Thaps269866;Parent=Thaps269866;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 222028 222744 . - 0 ID=Thaps269866;Parent=Thaps269866;rank=1 chr16a . exon 222028 222744 . - . ID=Thaps269866.1;Parent=Thaps269866;constitutive=1;rank=1 chr16a . repeat_region 231018 231044 . ? . description=trf chr16a . repeat_region 231018 231058 . ? . description=dust chr16a . repeat_region 233642 233649 . ? . description=dust chr16a . repeat_region 238632 238652 . ? . description=trf chr16a . repeat_region 238632 238652 . ? . description=dust chr16a . repeat_region 238969 238976 . ? . description=dust chr16a ensembl protein_coding_gene 231461 233345 . + . ID=Thaps10398;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ0];external_name=Thaps10398;logic_name=jgi_thaps3 chr16a ensembl transcript 231461 233345 . + . ID=Thaps10398;Parent=Thaps10398;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 231461 233134 . + 0 ID=Thaps10398;Parent=Thaps10398;rank=1 chr16a . exon 231461 233134 . + . ID=Thaps10398.1;Parent=Thaps10398;constitutive=1;rank=1 chr16a . CDS 233220 233345 . + 0 ID=Thaps10398;Parent=Thaps10398;rank=2 chr16a . exon 233220 233345 . + . ID=Thaps10398.2;Parent=Thaps10398;constitutive=1;rank=2 chr16a ensembl protein_coding_gene 235765 237268 . + . ID=Thaps10400;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ2];external_name=Thaps10400;logic_name=jgi_thaps3 chr16a ensembl transcript 235765 237268 . + . ID=Thaps10400;Parent=Thaps10400;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 235765 236569 . + 0 ID=Thaps10400;Parent=Thaps10400;rank=1 chr16a . exon 235765 236569 . + . ID=Thaps10400.1;Parent=Thaps10400;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 236615 237068 . + 0 ID=Thaps10400;Parent=Thaps10400;rank=2 chr16a . exon 236615 237068 . + . ID=Thaps10400.2;Parent=Thaps10400;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 237093 237268 . + 0 ID=Thaps10400;Parent=Thaps10400;rank=3 chr16a . exon 237093 237268 . + . ID=Thaps10400.3;Parent=Thaps10400;constitutive=1;ensembl_end_phase=2;rank=3 chr16a ensembl protein_coding_gene 238961 242393 . + . ID=Thaps10402;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ4];external_name=Thaps10402;logic_name=jgi_thaps3 chr16a ensembl transcript 238961 242393 . + . ID=Thaps10402;Parent=Thaps10402;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 238961 239061 . + 0 ID=Thaps10402;Parent=Thaps10402;rank=1 chr16a . exon 238961 239061 . + . ID=Thaps10402.1;Parent=Thaps10402;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 239108 239211 . + 0 ID=Thaps10402;Parent=Thaps10402;rank=2 chr16a . exon 239108 239211 . + . ID=Thaps10402.2;Parent=Thaps10402;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 239624 240621 . + 0 ID=Thaps10402;Parent=Thaps10402;rank=3 chr16a . exon 239624 240621 . + . ID=Thaps10402.3;Parent=Thaps10402;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 240757 240787 . + 0 ID=Thaps10402;Parent=Thaps10402;rank=4 chr16a . CDS 241078 242393 . + 0 ID=Thaps10402;Parent=Thaps10402;rank=5 chr16a ensembl protein_coding_gene 233814 235541 . - . ID=Thaps25132;biotype=protein_coding;description=Glycerol kinase [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ1];external_name=GYK2;logic_name=jgi_thaps3 chr16a ensembl transcript 233814 235541 . - . ID=Thaps25132;Parent=Thaps25132;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 233814 235541 . - 0 ID=Thaps25132;Parent=Thaps25132;rank=1 chr16a . exon 233814 235541 . - . ID=Thaps25132.1;Parent=Thaps25132;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 237453 238655 . - . ID=Thaps780;biotype=protein_coding;description=UDP galactopyranose mutase [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ3];external_name=Thaps780;logic_name=jgi_thaps3 chr16a ensembl transcript 237453 238655 . - . ID=Thaps780;Parent=Thaps780;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 237453 238655 . - 0 ID=Thaps780;Parent=Thaps780;rank=1 chr16a . exon 237453 238655 . - . ID=Thaps780.1;Parent=Thaps780;constitutive=1;rank=1 chr16a . exon 240757 240787 . + . ID=Thaps10402.4;Parent=Thaps10402;constitutive=1;ensembl_end_phase=1;rank=4 chr16a . exon 241078 242393 . + . ID=Thaps10402.5;Parent=Thaps10402;constitutive=1;ensembl_end_phase=2;rank=5 chr16a ensembl protein_coding_gene 243405 244883 . - . ID=Thaps10403;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ5];external_name=Thaps10403;logic_name=jgi_thaps3 chr16a ensembl transcript 243405 244883 . - . ID=Thaps10403;Parent=Thaps10403;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 243405 243688 . - 0 ID=Thaps10403;Parent=Thaps10403;rank=4 chr16a . exon 243405 243688 . - . ID=Thaps10403.4;Parent=Thaps10403;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 243756 243834 . - 0 ID=Thaps10403;Parent=Thaps10403;rank=3 chr16a . exon 243756 243834 . - . ID=Thaps10403.3;Parent=Thaps10403;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 243931 244419 . - 0 ID=Thaps10403;Parent=Thaps10403;rank=2 chr16a . exon 243931 244419 . - . ID=Thaps10403.2;Parent=Thaps10403;constitutive=1;rank=2 chr16a . CDS 244497 244883 . - 0 ID=Thaps10403;Parent=Thaps10403;rank=1 chr16a . exon 244497 244883 . - . ID=Thaps10403.1;Parent=Thaps10403;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 245154 247234 . + . ID=Thaps10404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ6];external_name=Thaps10404;logic_name=jgi_thaps3 chr16a ensembl transcript 245154 247234 . + . ID=Thaps10404;Parent=Thaps10404;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 245154 245350 . + 0 ID=Thaps10404;Parent=Thaps10404;rank=1 chr16a . exon 245154 245350 . + . ID=Thaps10404.1;Parent=Thaps10404;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 245465 245513 . + 0 ID=Thaps10404;Parent=Thaps10404;rank=2 chr16a . exon 245465 245513 . + . ID=Thaps10404.2;Parent=Thaps10404;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 245624 246100 . + 0 ID=Thaps10404;Parent=Thaps10404;rank=3 chr16a . exon 245624 246100 . + . ID=Thaps10404.3;Parent=Thaps10404;constitutive=1;rank=3 chr16a . CDS 246175 246289 . + 0 ID=Thaps10404;Parent=Thaps10404;rank=4 chr16a . exon 246175 246289 . + . ID=Thaps10404.4;Parent=Thaps10404;constitutive=1;ensembl_end_phase=1;rank=4 chr16a . CDS 246402 246511 . + 0 ID=Thaps10404;Parent=Thaps10404;rank=5 chr16a . exon 246402 246511 . + . ID=Thaps10404.5;Parent=Thaps10404;constitutive=1;ensembl_end_phase=2;rank=5 chr16a . CDS 246585 246698 . + 0 ID=Thaps10404;Parent=Thaps10404;rank=6 chr16a . exon 246585 246698 . + . ID=Thaps10404.6;Parent=Thaps10404;constitutive=1;rank=6 chr16a . CDS 246776 247234 . + 0 ID=Thaps10404;Parent=Thaps10404;rank=7 chr16a . exon 246776 247234 . + . ID=Thaps10404.7;Parent=Thaps10404;constitutive=1;rank=7 chr16a ensembl protein_coding_gene 247355 248757 . - . ID=Thaps10405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ7];external_name=Thaps10405;logic_name=jgi_thaps3 chr16a ensembl transcript 247355 248757 . - . ID=Thaps10405;Parent=Thaps10405;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 247355 247688 . - 0 ID=Thaps10405;Parent=Thaps10405;rank=2 chr16a . exon 247355 247688 . - . ID=Thaps10405.2;Parent=Thaps10405;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 247733 248757 . - 0 ID=Thaps10405;Parent=Thaps10405;rank=1 chr16a . exon 247733 248757 . - . ID=Thaps10405.1;Parent=Thaps10405;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . repeat_region 250145 250168 . ? . description=trf chr16a . repeat_region 250145 250168 . ? . description=dust chr16a . repeat_region 252463 252470 . ? . description=dust chr16a . repeat_region 252564 252603 . ? . description=trf chr16a . repeat_region 257529 257568 . ? . description=trf chr16a ensembl protein_coding_gene 255287 256225 . - . ID=Thaps10407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ9];external_name=Thaps10407;logic_name=jgi_thaps3 chr16a ensembl transcript 255287 256225 . - . ID=Thaps10407;Parent=Thaps10407;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 255287 256225 . - 0 ID=Thaps10407;Parent=Thaps10407;rank=1 chr16a . exon 255287 256225 . - . ID=Thaps10407.1;Parent=Thaps10407;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 250336 251274 . - . ID=Thaps25133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCJ8];external_name=Thaps25133;logic_name=jgi_thaps3 chr16a ensembl transcript 250336 251274 . - . ID=Thaps25133;Parent=Thaps25133;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 250336 251274 . - 0 ID=Thaps25133;Parent=Thaps25133;rank=1 chr16a . exon 250336 251274 . - . ID=Thaps25133.1;Parent=Thaps25133;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 261915 268481 . + . ID=Thaps10409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCK1];external_name=Thaps10409;logic_name=jgi_thaps3 chr16a ensembl transcript 261915 268481 . + . ID=Thaps10409;Parent=Thaps10409;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 261915 262661 . + 0 ID=Thaps10409;Parent=Thaps10409;rank=1 chr16a . exon 261915 262661 . + . ID=Thaps10409.1;Parent=Thaps10409;constitutive=1;rank=1 chr16a . CDS 262969 263970 . + 0 ID=Thaps10409;Parent=Thaps10409;rank=2 chr16a . exon 262969 263970 . + . ID=Thaps10409.2;Parent=Thaps10409;constitutive=1;rank=2 chr16a . CDS 264078 264471 . + 0 ID=Thaps10409;Parent=Thaps10409;rank=3 chr16a . exon 264078 264471 . + . ID=Thaps10409.3;Parent=Thaps10409;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 264547 265304 . + 0 ID=Thaps10409;Parent=Thaps10409;rank=4 chr16a . exon 264547 265304 . + . ID=Thaps10409.4;Parent=Thaps10409;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 265355 266284 . + 0 ID=Thaps10409;Parent=Thaps10409;rank=5 chr16a . exon 265355 266284 . + . ID=Thaps10409.5;Parent=Thaps10409;constitutive=1;rank=5 chr16a . CDS 266365 267740 . + 0 ID=Thaps10409;Parent=Thaps10409;rank=6 chr16a . exon 266365 267740 . + . ID=Thaps10409.6;Parent=Thaps10409;constitutive=1;ensembl_end_phase=2;rank=6 chr16a . CDS 267828 268230 . + 0 ID=Thaps10409;Parent=Thaps10409;rank=7 chr16a . exon 267828 268230 . + . ID=Thaps10409.7;Parent=Thaps10409;constitutive=1;ensembl_end_phase=1;rank=7 chr16a . CDS 268335 268481 . + 0 ID=Thaps10409;Parent=Thaps10409;rank=8 chr16a . exon 268335 268481 . + . ID=Thaps10409.8;Parent=Thaps10409;constitutive=1;rank=8 chr16a ensembl protein_coding_gene 268563 275480 . - . ID=Thaps25135;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCK2];external_name=Thaps25135;logic_name=jgi_thaps3 chr16a ensembl transcript 268563 275480 . - . ID=Thaps25135;Parent=Thaps25135;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 268563 269710 . - 0 ID=Thaps25135;Parent=Thaps25135;rank=7 chr16a . exon 268563 269710 . - . ID=Thaps25135.7;Parent=Thaps25135;constitutive=1;ensembl_end_phase=2;rank=7 chr16a . CDS 270165 270460 . - 0 ID=Thaps25135;Parent=Thaps25135;rank=6 chr16a . CDS 270747 271682 . - 0 ID=Thaps25135;Parent=Thaps25135;rank=5 chr16a . CDS 271780 272048 . - 0 ID=Thaps25135;Parent=Thaps25135;rank=4 chr16a . CDS 272135 272646 . - 0 ID=Thaps25135;Parent=Thaps25135;rank=3 chr16a . CDS 272731 275166 . - 0 ID=Thaps25135;Parent=Thaps25135;rank=2 chr16a . CDS 275294 275480 . - 0 ID=Thaps25135;Parent=Thaps25135;rank=1 chr16a ensembl protein_coding_gene 260175 261680 . + . ID=Thaps269868;biotype=protein_coding;description=Oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8LCK0];external_name=Thaps269868;logic_name=jgi_thaps3 chr16a ensembl transcript 260175 261680 . + . ID=Thaps269868;Parent=Thaps269868;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 260175 260602 . + 0 ID=Thaps269868;Parent=Thaps269868;rank=1 chr16a . exon 260175 260602 . + . ID=Thaps269868.1;Parent=Thaps269868;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 260720 261680 . + 0 ID=Thaps269868;Parent=Thaps269868;rank=2 chr16a . exon 260720 261680 . + . ID=Thaps269868.2;Parent=Thaps269868;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . repeat_region 272110 272119 . ? . description=dust chr16a . exon 270165 270460 . - . ID=Thaps25135.6;Parent=Thaps25135;constitutive=1;ensembl_end_phase=2;rank=6 chr16a . exon 270747 271682 . - . ID=Thaps25135.5;Parent=Thaps25135;constitutive=1;rank=5 chr16a . exon 271780 272048 . - . ID=Thaps25135.4;Parent=Thaps25135;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . exon 272135 272646 . - . ID=Thaps25135.3;Parent=Thaps25135;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . exon 272731 275166 . - . ID=Thaps25135.2;Parent=Thaps25135;constitutive=1;rank=2 chr16a . exon 275294 275480 . - . ID=Thaps25135.1;Parent=Thaps25135;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 275698 276879 . + . ID=Thaps25136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCK3];external_name=Thaps25136;logic_name=jgi_thaps3 chr16a ensembl transcript 275698 276879 . + . ID=Thaps25136;Parent=Thaps25136;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 275698 276272 . + 0 ID=Thaps25136;Parent=Thaps25136;rank=1 chr16a . exon 275698 276272 . + . ID=Thaps25136.1;Parent=Thaps25136;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 276387 276879 . + 0 ID=Thaps25136;Parent=Thaps25136;rank=2 chr16a . exon 276387 276879 . + . ID=Thaps25136.2;Parent=Thaps25136;constitutive=1;ensembl_end_phase=1;rank=2 chr16a ensembl protein_coding_gene 277454 278598 . - . ID=Thaps264371;biotype=protein_coding;description=Transporter belonging to the MFS superfamily [Source:UniProtKB/TrEMBL%3BAcc:B8LCK4];external_name=Thaps264371;logic_name=jgi_thaps3 chr16a ensembl transcript 277454 278598 . - . ID=Thaps264371;Parent=Thaps264371;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 277454 278598 . - 0 ID=Thaps264371;Parent=Thaps264371;rank=1 chr16a . exon 277454 278598 . - . ID=Thaps264371.1;Parent=Thaps264371;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . repeat_region 280234 280257 . ? . description=trf chr16a . repeat_region 280871 280981 . ? . description=trf chr16a . repeat_region 281831 281863 . ? . description=trf chr16a . repeat_region 281910 281955 . ? . description=trf chr16a ensembl protein_coding_gene 285078 286454 . + . ID=Thaps10414;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCK6];external_name=Thaps10414;logic_name=jgi_thaps3 chr16a ensembl transcript 285078 286454 . + . ID=Thaps10414;Parent=Thaps10414;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 285078 286454 . + 0 ID=Thaps10414;Parent=Thaps10414;rank=1 chr16a . exon 285078 286454 . + . ID=Thaps10414.1;Parent=Thaps10414;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 289280 290236 . - . ID=Thaps10416;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCK8];external_name=Thaps10416;logic_name=jgi_thaps3 chr16a ensembl transcript 289280 290236 . - . ID=Thaps10416;Parent=Thaps10416;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 289280 290236 . - 0 ID=Thaps10416;Parent=Thaps10416;rank=1 chr16a . exon 289280 290236 . - . ID=Thaps10416.1;Parent=Thaps10416;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 280140 283742 . + . ID=Thaps25137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCK5];external_name=Thaps25137;logic_name=jgi_thaps3 chr16a ensembl transcript 280140 283742 . + . ID=Thaps25137;Parent=Thaps25137;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 280140 283742 . + 0 ID=Thaps25137;Parent=Thaps25137;rank=1 chr16a . exon 280140 283742 . + . ID=Thaps25137.1;Parent=Thaps25137;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 287129 289012 . - . ID=Thaps25138;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCK7];external_name=Thaps25138;logic_name=jgi_thaps3 chr16a ensembl transcript 287129 289012 . - . ID=Thaps25138;Parent=Thaps25138;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 287129 289012 . - 0 ID=Thaps25138;Parent=Thaps25138;rank=1 chr16a . exon 287129 289012 . - . ID=Thaps25138.1;Parent=Thaps25138;constitutive=1;rank=1 chr16a . repeat_region 297846 297896 . ? . description=dust chr16a . repeat_region 299317 299338 . ? . description=dust chr16a . repeat_region 299358 299421 . ? . description=dust chr16a ensembl protein_coding_gene 290973 291632 . + . ID=Thaps10417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCK9];external_name=Thaps10417;logic_name=jgi_thaps3 chr16a ensembl transcript 290973 291632 . + . ID=Thaps10417;Parent=Thaps10417;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 290973 291632 . + 0 ID=Thaps10417;Parent=Thaps10417;rank=1 chr16a . exon 290973 291632 . + . ID=Thaps10417.1;Parent=Thaps10417;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 297181 298317 . - . ID=Thaps10419;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL1];external_name=Thaps10419;logic_name=jgi_thaps3 chr16a ensembl transcript 297181 298317 . - . ID=Thaps10419;Parent=Thaps10419;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 297181 298317 . - 0 ID=Thaps10419;Parent=Thaps10419;rank=1 chr16a . exon 297181 298317 . - . ID=Thaps10419.1;Parent=Thaps10419;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 298957 302462 . + . ID=Thaps25139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL2];external_name=Thaps25139;logic_name=jgi_thaps3 chr16a ensembl transcript 298957 302462 . + . ID=Thaps25139;Parent=Thaps25139;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 298957 299878 . + 0 ID=Thaps25139;Parent=Thaps25139;rank=1 chr16a . exon 298957 299878 . + . ID=Thaps25139.1;Parent=Thaps25139;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 299984 300470 . + 0 ID=Thaps25139;Parent=Thaps25139;rank=2 chr16a . CDS 300557 302462 . + 0 ID=Thaps25139;Parent=Thaps25139;rank=3 chr16a ensembl protein_coding_gene 294278 295732 . + . ID=Thaps37793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL0];external_name=Thaps37793;logic_name=jgi_thaps3 chr16a ensembl transcript 294278 295732 . + . ID=Thaps37793;Parent=Thaps37793;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 294278 294785 . + 0 ID=Thaps37793;Parent=Thaps37793;rank=1 chr16a . exon 294278 294785 . + . ID=Thaps37793.1;Parent=Thaps37793;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 294849 294971 . + 0 ID=Thaps37793;Parent=Thaps37793;rank=2 chr16a . exon 294849 294971 . + . ID=Thaps37793.2;Parent=Thaps37793;constitutive=1;rank=2 chr16a . CDS 295170 295732 . + 0 ID=Thaps37793;Parent=Thaps37793;rank=3 chr16a . exon 295170 295732 . + . ID=Thaps37793.3;Parent=Thaps37793;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . repeat_region 300091 300110 . ? . description=trf chr16a . repeat_region 307827 307852 . ? . description=trf chr16a ensembl protein_coding_gene 302671 305179 . - . ID=Thaps10421;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL3];external_name=Thaps10421;logic_name=jgi_thaps3 chr16a ensembl transcript 302671 305179 . - . ID=Thaps10421;Parent=Thaps10421;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 302671 303080 . - 0 ID=Thaps10421;Parent=Thaps10421;rank=8 chr16a . exon 302671 303080 . - . ID=Thaps10421.8;Parent=Thaps10421;constitutive=1;ensembl_end_phase=2;rank=8 chr16a . CDS 303153 303636 . - 0 ID=Thaps10421;Parent=Thaps10421;rank=7 chr16a . exon 303153 303636 . - . ID=Thaps10421.7;Parent=Thaps10421;constitutive=1;ensembl_end_phase=1;rank=7 chr16a . CDS 303721 303764 . - 0 ID=Thaps10421;Parent=Thaps10421;rank=6 chr16a . exon 303721 303764 . - . ID=Thaps10421.6;Parent=Thaps10421;constitutive=1;ensembl_end_phase=2;rank=6 chr16a . CDS 303849 304001 . - 0 ID=Thaps10421;Parent=Thaps10421;rank=5 chr16a . exon 303849 304001 . - . ID=Thaps10421.5;Parent=Thaps10421;constitutive=1;rank=5 chr16a . CDS 304074 304320 . - 0 ID=Thaps10421;Parent=Thaps10421;rank=4 chr16a . exon 304074 304320 . - . ID=Thaps10421.4;Parent=Thaps10421;constitutive=1;ensembl_end_phase=1;rank=4 chr16a . CDS 304407 304598 . - 0 ID=Thaps10421;Parent=Thaps10421;rank=3 chr16a . exon 304407 304598 . - . ID=Thaps10421.3;Parent=Thaps10421;constitutive=1;rank=3 chr16a . CDS 304678 304774 . - 0 ID=Thaps10421;Parent=Thaps10421;rank=2 chr16a . exon 304678 304774 . - . ID=Thaps10421.2;Parent=Thaps10421;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 304863 305179 . - 0 ID=Thaps10421;Parent=Thaps10421;rank=1 chr16a . exon 304863 305179 . - . ID=Thaps10421.1;Parent=Thaps10421;constitutive=1;ensembl_end_phase=2;rank=1 chr16a ensembl protein_coding_gene 306468 307376 . + . ID=Thaps10422;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL4];external_name=Thaps10422;logic_name=jgi_thaps3 chr16a ensembl transcript 306468 307376 . + . ID=Thaps10422;Parent=Thaps10422;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 306468 307376 . + 0 ID=Thaps10422;Parent=Thaps10422;rank=1 chr16a . exon 306468 307376 . + . ID=Thaps10422.1;Parent=Thaps10422;constitutive=1;rank=1 chr16a . exon 299984 300470 . + . ID=Thaps25139.2;Parent=Thaps25139;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . exon 300557 302462 . + . ID=Thaps25139.3;Parent=Thaps25139;constitutive=1;ensembl_end_phase=1;rank=3 chr16a ensembl protein_coding_gene 307495 315716 . - . ID=Thaps25140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL5];external_name=Thaps25140;logic_name=jgi_thaps3 chr16a ensembl transcript 307495 315716 . - . ID=Thaps25140;Parent=Thaps25140;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 307495 307758 . - 0 ID=Thaps25140;Parent=Thaps25140;rank=5 chr16a . exon 307495 307758 . - . ID=Thaps25140.5;Parent=Thaps25140;constitutive=1;rank=5 chr16a . CDS 308079 308497 . - 0 ID=Thaps25140;Parent=Thaps25140;rank=4 chr16a . exon 308079 308497 . - . ID=Thaps25140.4;Parent=Thaps25140;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 308623 309685 . - 0 ID=Thaps25140;Parent=Thaps25140;rank=3 chr16a . exon 308623 309685 . - . ID=Thaps25140.3;Parent=Thaps25140;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 309754 309969 . - 0 ID=Thaps25140;Parent=Thaps25140;rank=2 chr16a . exon 309754 309969 . - . ID=Thaps25140.2;Parent=Thaps25140;constitutive=1;rank=2 chr16a . CDS 310044 315716 . - 0 ID=Thaps25140;Parent=Thaps25140;rank=1 chr16a . repeat_region 319076 319083 . ? . description=dust chr16a ensembl protein_coding_gene 316415 317193 . + . ID=Thaps10424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL6];external_name=Thaps10424;logic_name=jgi_thaps3 chr16a ensembl transcript 316415 317193 . + . ID=Thaps10424;Parent=Thaps10424;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 316415 316682 . + 0 ID=Thaps10424;Parent=Thaps10424;rank=1 chr16a . exon 316415 316682 . + . ID=Thaps10424.1;Parent=Thaps10424;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 316799 316841 . + 0 ID=Thaps10424;Parent=Thaps10424;rank=2 chr16a . exon 316799 316841 . + . ID=Thaps10424.2;Parent=Thaps10424;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 316956 317193 . + 0 ID=Thaps10424;Parent=Thaps10424;rank=3 chr16a . exon 316956 317193 . + . ID=Thaps10424.3;Parent=Thaps10424;constitutive=1;ensembl_end_phase=1;rank=3 chr16a ensembl protein_coding_gene 317419 318773 . - . ID=Thaps10425;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL7];external_name=Thaps10425;logic_name=jgi_thaps3 chr16a ensembl transcript 317419 318773 . - . ID=Thaps10425;Parent=Thaps10425;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 317419 318063 . - 0 ID=Thaps10425;Parent=Thaps10425;rank=2 chr16a . exon 317419 318063 . - . ID=Thaps10425.2;Parent=Thaps10425;constitutive=1;rank=2 chr16a . CDS 318159 318773 . - 0 ID=Thaps10425;Parent=Thaps10425;rank=1 chr16a . exon 318159 318773 . - . ID=Thaps10425.1;Parent=Thaps10425;constitutive=1;rank=1 chr16a . exon 310044 315716 . - . ID=Thaps25140.1;Parent=Thaps25140;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 319536 320731 . + . ID=Thaps25141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL8];external_name=Thaps25141;logic_name=jgi_thaps3 chr16a ensembl transcript 319536 320731 . + . ID=Thaps25141;Parent=Thaps25141;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 319536 319768 . + 0 ID=Thaps25141;Parent=Thaps25141;rank=1 chr16a . exon 319536 319768 . + . ID=Thaps25141.1;Parent=Thaps25141;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 319885 319992 . + 0 ID=Thaps25141;Parent=Thaps25141;rank=2 chr16a . CDS 320119 320731 . + 0 ID=Thaps25141;Parent=Thaps25141;rank=3 chr16a . repeat_region 322189 322210 . ? . description=trf chr16a . repeat_region 322775 322794 . ? . description=trf chr16a . repeat_region 323204 323235 . ? . description=trf chr16a . repeat_region 323250 323280 . ? . description=trf chr16a . repeat_region 327726 327764 . ? . description=trf chr16a ensembl protein_coding_gene 326389 327615 . - . ID=Thaps10428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCM0];external_name=Thaps10428;logic_name=jgi_thaps3 chr16a ensembl transcript 326389 327615 . - . ID=Thaps10428;Parent=Thaps10428;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 326389 327615 . - 0 ID=Thaps10428;Parent=Thaps10428;rank=1 chr16a . exon 326389 327615 . - . ID=Thaps10428.1;Parent=Thaps10428;constitutive=1;rank=1 chr16a . exon 319885 319992 . + . ID=Thaps25141.2;Parent=Thaps25141;constitutive=1;rank=2 chr16a . exon 320119 320731 . + . ID=Thaps25141.3;Parent=Thaps25141;constitutive=1;ensembl_end_phase=1;rank=3 chr16a ensembl protein_coding_gene 322882 326306 . + . ID=Thaps25142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCL9];external_name=Thaps25142;logic_name=jgi_thaps3 chr16a ensembl transcript 322882 326306 . + . ID=Thaps25142;Parent=Thaps25142;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 322882 323824 . + 0 ID=Thaps25142;Parent=Thaps25142;rank=1 chr16a . exon 322882 323824 . + . ID=Thaps25142.1;Parent=Thaps25142;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 323929 324025 . + 0 ID=Thaps25142;Parent=Thaps25142;rank=2 chr16a . exon 323929 324025 . + . ID=Thaps25142.2;Parent=Thaps25142;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 324116 326306 . + 0 ID=Thaps25142;Parent=Thaps25142;rank=3 chr16a . exon 324116 326306 . + . ID=Thaps25142.3;Parent=Thaps25142;constitutive=1;ensembl_end_phase=1;rank=3 chr16a ensembl protein_coding_gene 327975 329000 . - . ID=Thaps25143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCM1];external_name=Thaps25143;logic_name=jgi_thaps3 chr16a ensembl transcript 327975 329000 . - . ID=Thaps25143;Parent=Thaps25143;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 327975 329000 . - 0 ID=Thaps25143;Parent=Thaps25143;rank=1 chr16a . exon 327975 329000 . - . ID=Thaps25143.1;Parent=Thaps25143;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 329207 332516 . + . ID=Thaps25144;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCM2];external_name=Thaps25144;logic_name=jgi_thaps3 chr16a ensembl transcript 329207 332516 . + . ID=Thaps25144;Parent=Thaps25144;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 329207 329451 . + 0 ID=Thaps25144;Parent=Thaps25144;rank=1 chr16a . exon 329207 329451 . + . ID=Thaps25144.1;Parent=Thaps25144;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 329770 332403 . + 0 ID=Thaps25144;Parent=Thaps25144;rank=2 chr16a . exon 329770 332403 . + . ID=Thaps25144.2;Parent=Thaps25144;constitutive=1;rank=2 chr16a . CDS 332483 332516 . + 0 ID=Thaps25144;Parent=Thaps25144;rank=3 chr16a . repeat_region 334112 334121 . ? . description=dust chr16a ensembl protein_coding_gene 335716 339072 . - . ID=Thaps10433;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCM5];external_name=Thaps10433;logic_name=jgi_thaps3 chr16a ensembl transcript 335716 339072 . - . ID=Thaps10433;Parent=Thaps10433;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 335716 339072 . - 0 ID=Thaps10433;Parent=Thaps10433;rank=1 chr16a . exon 335716 339072 . - . ID=Thaps10433.1;Parent=Thaps10433;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 339634 341863 . + . ID=Thaps10434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCM6];external_name=Thaps10434;logic_name=jgi_thaps3 chr16a ensembl transcript 339634 341863 . + . ID=Thaps10434;Parent=Thaps10434;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 339634 340861 . + 0 ID=Thaps10434;Parent=Thaps10434;rank=1 chr16a . exon 339634 340861 . + . ID=Thaps10434.1;Parent=Thaps10434;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 341054 341456 . + 0 ID=Thaps10434;Parent=Thaps10434;rank=2 chr16a . CDS 341551 341612 . + 0 ID=Thaps10434;Parent=Thaps10434;rank=3 chr16a . CDS 341697 341863 . + 0 ID=Thaps10434;Parent=Thaps10434;rank=4 chr16a . exon 332483 332516 . + . ID=Thaps25144.3;Parent=Thaps25144;constitutive=1;ensembl_end_phase=1;rank=3 chr16a ensembl protein_coding_gene 334695 335586 . + . ID=Thaps37791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCM4];external_name=Thaps37791;logic_name=jgi_thaps3 chr16a ensembl transcript 334695 335586 . + . ID=Thaps37791;Parent=Thaps37791;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 334695 335233 . + 0 ID=Thaps37791;Parent=Thaps37791;rank=1 chr16a . exon 334695 335233 . + . ID=Thaps37791.1;Parent=Thaps37791;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 335301 335586 . + 0 ID=Thaps37791;Parent=Thaps37791;rank=2 chr16a . exon 335301 335586 . + . ID=Thaps37791.2;Parent=Thaps37791;constitutive=1;ensembl_end_phase=1;rank=2 chr16a ensembl protein_coding_gene 333053 333685 . - . ID=Thaps37813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCM3];external_name=Thaps37813;logic_name=jgi_thaps3 chr16a ensembl transcript 333053 333685 . - . ID=Thaps37813;Parent=Thaps37813;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 333053 333190 . - 0 ID=Thaps37813;Parent=Thaps37813;rank=2 chr16a . exon 333053 333190 . - . ID=Thaps37813.2;Parent=Thaps37813;constitutive=1;rank=2 chr16a . CDS 333308 333685 . - 0 ID=Thaps37813;Parent=Thaps37813;rank=1 chr16a . exon 333308 333685 . - . ID=Thaps37813.1;Parent=Thaps37813;constitutive=1;rank=1 chr16a . repeat_region 346183 346221 . ? . description=trf chr16a . exon 341054 341456 . + . ID=Thaps10434.2;Parent=Thaps10434;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . exon 341551 341612 . + . ID=Thaps10434.3;Parent=Thaps10434;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . exon 341697 341863 . + . ID=Thaps10434.4;Parent=Thaps10434;constitutive=1;ensembl_end_phase=2;rank=4 chr16a ensembl protein_coding_gene 347486 350362 . + . ID=Thaps10437;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCM9];external_name=Thaps10437;logic_name=jgi_thaps3 chr16a ensembl transcript 347486 350362 . + . ID=Thaps10437;Parent=Thaps10437;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 347486 348698 . + 0 ID=Thaps10437;Parent=Thaps10437;rank=1 chr16a . exon 347486 348698 . + . ID=Thaps10437.1;Parent=Thaps10437;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 348814 349642 . + 0 ID=Thaps10437;Parent=Thaps10437;rank=2 chr16a . exon 348814 349642 . + . ID=Thaps10437.2;Parent=Thaps10437;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 349738 350362 . + 0 ID=Thaps10437;Parent=Thaps10437;rank=3 chr16a . exon 349738 350362 . + . ID=Thaps10437.3;Parent=Thaps10437;constitutive=1;ensembl_end_phase=1;rank=3 chr16a ensembl protein_coding_gene 345647 346941 . - . ID=Thaps25147;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCM8];external_name=Thaps25147;logic_name=jgi_thaps3 chr16a ensembl transcript 345647 346941 . - . ID=Thaps25147;Parent=Thaps25147;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 345647 346534 . - 0 ID=Thaps25147;Parent=Thaps25147;rank=2 chr16a . exon 345647 346534 . - . ID=Thaps25147.2;Parent=Thaps25147;constitutive=1;rank=2 chr16a . CDS 346705 346941 . - 0 ID=Thaps25147;Parent=Thaps25147;rank=1 chr16a . exon 346705 346941 . - . ID=Thaps25147.1;Parent=Thaps25147;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 342792 343793 . + . ID=Thaps269871;biotype=protein_coding;description=Exonuclease 1 [Source:UniProtKB/TrEMBL%3BAcc:B8LCM7];external_name=Thaps269871;logic_name=jgi_thaps3 chr16a ensembl transcript 342792 343793 . + . ID=Thaps269871;Parent=Thaps269871;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 342792 343793 . + 0 ID=Thaps269871;Parent=Thaps269871;rank=1 chr16a . exon 342792 343793 . + . ID=Thaps269871.1;Parent=Thaps269871;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 357508 359214 . - . ID=Thaps10440;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCN3];external_name=Thaps10440;logic_name=jgi_thaps3 chr16a ensembl transcript 357508 359214 . - . ID=Thaps10440;Parent=Thaps10440;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 357508 359214 . - 0 ID=Thaps10440;Parent=Thaps10440;rank=1 chr16a . exon 357508 359214 . - . ID=Thaps10440.1;Parent=Thaps10440;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 352084 352725 . - . ID=Thaps37758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCN1];external_name=Thaps37758;logic_name=jgi_thaps3 chr16a ensembl transcript 352084 352725 . - . ID=Thaps37758;Parent=Thaps37758;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 352084 352725 . - 0 ID=Thaps37758;Parent=Thaps37758;rank=1 chr16a . exon 352084 352725 . - . ID=Thaps37758.1;Parent=Thaps37758;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 356119 356586 . + . ID=Thaps37786;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCN2];external_name=Thaps37786;logic_name=jgi_thaps3 chr16a ensembl transcript 356119 356586 . + . ID=Thaps37786;Parent=Thaps37786;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 356119 356586 . + 0 ID=Thaps37786;Parent=Thaps37786;rank=1 chr16a . exon 356119 356586 . + . ID=Thaps37786.1;Parent=Thaps37786;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 350719 351342 . - . ID=Thaps37795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCN0];external_name=Thaps37795;logic_name=jgi_thaps3 chr16a ensembl transcript 350719 351342 . - . ID=Thaps37795;Parent=Thaps37795;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 350719 351342 . - 0 ID=Thaps37795;Parent=Thaps37795;rank=1 chr16a . exon 350719 351342 . - . ID=Thaps37795.1;Parent=Thaps37795;constitutive=1;rank=1 chr16a . repeat_region 360086 360113 . ? . description=dust chr16a . repeat_region 360981 361042 . ? . description=dust chr16a . repeat_region 367677 367696 . ? . description=trf chr16a ensembl protein_coding_gene 359900 361512 . + . ID=Thaps10441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCN4];external_name=Thaps10441;logic_name=jgi_thaps3 chr16a ensembl transcript 359900 361512 . + . ID=Thaps10441;Parent=Thaps10441;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 359900 360148 . + 0 ID=Thaps10441;Parent=Thaps10441;rank=1 chr16a . exon 359900 360148 . + . ID=Thaps10441.1;Parent=Thaps10441;constitutive=1;rank=1 chr16a . CDS 360207 360637 . + 0 ID=Thaps10441;Parent=Thaps10441;rank=2 chr16a . exon 360207 360637 . + . ID=Thaps10441.2;Parent=Thaps10441;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 360758 361088 . + 0 ID=Thaps10441;Parent=Thaps10441;rank=3 chr16a . exon 360758 361088 . + . ID=Thaps10441.3;Parent=Thaps10441;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 361194 361280 . + 0 ID=Thaps10441;Parent=Thaps10441;rank=4 chr16a . exon 361194 361280 . + . ID=Thaps10441.4;Parent=Thaps10441;constitutive=1;rank=4 chr16a . CDS 361366 361512 . + 0 ID=Thaps10441;Parent=Thaps10441;rank=5 chr16a . exon 361366 361512 . + . ID=Thaps10441.5;Parent=Thaps10441;constitutive=1;rank=5 chr16a ensembl protein_coding_gene 362023 362451 . + . ID=Thaps10442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCN5];external_name=Thaps10442;logic_name=jgi_thaps3 chr16a ensembl transcript 362023 362451 . + . ID=Thaps10442;Parent=Thaps10442;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 362023 362451 . + 0 ID=Thaps10442;Parent=Thaps10442;rank=1 chr16a . exon 362023 362451 . + . ID=Thaps10442.1;Parent=Thaps10442;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 369564 369968 . - . ID=Thaps10446;biotype=protein_coding;description=Copper expressed protein 1Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:Q0ZUK3];external_name=CUE1;logic_name=jgi_thaps3 chr16a ensembl transcript 369564 369968 . - . ID=Thaps10446;Parent=Thaps10446;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 369564 369968 . - 0 ID=Thaps10446;Parent=Thaps10446;rank=1 chr16a . exon 369564 369968 . - . ID=Thaps10446.1;Parent=Thaps10446;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 365431 366284 . + . ID=Thaps25150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCN7];external_name=Thaps25150;logic_name=jgi_thaps3 chr16a ensembl transcript 365431 366284 . + . ID=Thaps25150;Parent=Thaps25150;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 365431 365578 . + 0 ID=Thaps25150;Parent=Thaps25150;rank=1 chr16a . exon 365431 365578 . + . ID=Thaps25150.1;Parent=Thaps25150;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 365667 365774 . + 0 ID=Thaps25150;Parent=Thaps25150;rank=2 chr16a . exon 365667 365774 . + . ID=Thaps25150.2;Parent=Thaps25150;constitutive=1;rank=2 chr16a . CDS 365851 366284 . + 0 ID=Thaps25150;Parent=Thaps25150;rank=3 chr16a . exon 365851 366284 . + . ID=Thaps25150.3;Parent=Thaps25150;constitutive=1;ensembl_end_phase=2;rank=3 chr16a ensembl protein_coding_gene 363286 364174 . + . ID=Thaps264377;biotype=protein_coding;description=26S proteasome beta type 7 subunit [Source:UniProtKB/TrEMBL%3BAcc:B8LCN6];external_name=PSB7;logic_name=jgi_thaps3 chr16a ensembl transcript 363286 364174 . + . ID=Thaps264377;Parent=Thaps264377;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 363286 364174 . + 0 ID=Thaps264377;Parent=Thaps264377;rank=1 chr16a . exon 363286 364174 . + . ID=Thaps264377.1;Parent=Thaps264377;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 368163 369304 . + . ID=Thaps269874;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCN8];external_name=Thaps269874;logic_name=jgi_thaps3 chr16a ensembl transcript 368163 369304 . + . ID=Thaps269874;Parent=Thaps269874;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 368163 368232 . + 0 ID=Thaps269874;Parent=Thaps269874;rank=1 chr16a . exon 368163 368232 . + . ID=Thaps269874.1;Parent=Thaps269874;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 368398 368750 . + 0 ID=Thaps269874;Parent=Thaps269874;rank=2 chr16a . exon 368398 368750 . + . ID=Thaps269874.2;Parent=Thaps269874;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 368802 369084 . + 0 ID=Thaps269874;Parent=Thaps269874;rank=3 chr16a . exon 368802 369084 . + . ID=Thaps269874.3;Parent=Thaps269874;constitutive=1;ensembl_end_phase=1;rank=3 chr16a . CDS 369177 369304 . + 0 ID=Thaps269874;Parent=Thaps269874;rank=4 chr16a . exon 369177 369304 . + . ID=Thaps269874.4;Parent=Thaps269874;constitutive=1;ensembl_end_phase=2;rank=4 chr16a ensembl protein_coding_gene 370508 371185 . + . ID=Thaps10447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP0];external_name=Thaps10447;logic_name=jgi_thaps3 chr16a ensembl transcript 370508 371185 . + . ID=Thaps10447;Parent=Thaps10447;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 370508 371185 . + 0 ID=Thaps10447;Parent=Thaps10447;rank=1 chr16a . exon 370508 371185 . + . ID=Thaps10447.1;Parent=Thaps10447;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 374553 375818 . + . ID=Thaps10450;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP3];external_name=Thaps10450;logic_name=jgi_thaps3 chr16a ensembl transcript 374553 375818 . + . ID=Thaps10450;Parent=Thaps10450;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 374553 375818 . + 0 ID=Thaps10450;Parent=Thaps10450;rank=1 chr16a . exon 374553 375818 . + . ID=Thaps10450.1;Parent=Thaps10450;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 377604 378473 . - . ID=Thaps10452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP5];external_name=Thaps10452;logic_name=jgi_thaps3 chr16a ensembl transcript 377604 378473 . - . ID=Thaps10452;Parent=Thaps10452;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 377604 378473 . - 0 ID=Thaps10452;Parent=Thaps10452;rank=1 chr16a . exon 377604 378473 . - . ID=Thaps10452.1;Parent=Thaps10452;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 379019 379423 . + . ID=Thaps10453;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP6];external_name=CUE2;logic_name=jgi_thaps3 chr16a ensembl transcript 379019 379423 . + . ID=Thaps10453;Parent=Thaps10453;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 379019 379423 . + 0 ID=Thaps10453;Parent=Thaps10453;rank=1 chr16a . exon 379019 379423 . + . ID=Thaps10453.1;Parent=Thaps10453;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 372930 374333 . - . ID=Thaps25153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP2];external_name=Thaps25153;logic_name=jgi_thaps3 chr16a ensembl transcript 372930 374333 . - . ID=Thaps25153;Parent=Thaps25153;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 372930 374023 . - 0 ID=Thaps25153;Parent=Thaps25153;rank=2 chr16a . exon 372930 374023 . - . ID=Thaps25153.2;Parent=Thaps25153;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 374159 374333 . - 0 ID=Thaps25153;Parent=Thaps25153;rank=1 chr16a . exon 374159 374333 . - . ID=Thaps25153.1;Parent=Thaps25153;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 376043 376903 . - . ID=Thaps264384;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP4];external_name=CUE7;logic_name=jgi_thaps3 chr16a ensembl transcript 376043 376903 . - . ID=Thaps264384;Parent=Thaps264384;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 376043 376903 . - 0 ID=Thaps264384;Parent=Thaps264384;rank=1 chr16a . exon 376043 376903 . - . ID=Thaps264384.1;Parent=Thaps264384;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 371887 372729 . + . ID=Thaps269876;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP1];external_name=CUE6;logic_name=jgi_thaps3 chr16a ensembl transcript 371887 372729 . + . ID=Thaps269876;Parent=Thaps269876;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 371887 372729 . + 0 ID=Thaps269876;Parent=Thaps269876;rank=1 chr16a . exon 371887 372729 . + . ID=Thaps269876.1;Parent=Thaps269876;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 387545 388231 . + . ID=Thaps10457;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ0];external_name=Thaps10457;logic_name=jgi_thaps3 chr16a ensembl transcript 387545 388231 . + . ID=Thaps10457;Parent=Thaps10457;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 387545 388231 . + 0 ID=Thaps10457;Parent=Thaps10457;rank=1 chr16a . exon 387545 388231 . + . ID=Thaps10457.1;Parent=Thaps10457;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 388474 388926 . - . ID=Thaps10458;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ1];external_name=Thaps10458;logic_name=jgi_thaps3 chr16a ensembl transcript 388474 388926 . - . ID=Thaps10458;Parent=Thaps10458;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 388474 388926 . - 0 ID=Thaps10458;Parent=Thaps10458;rank=1 chr16a . exon 388474 388926 . - . ID=Thaps10458.1;Parent=Thaps10458;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 389356 389880 . - . ID=Thaps25156;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ2];external_name=Thaps25156;logic_name=jgi_thaps3 chr16a ensembl transcript 389356 389880 . - . ID=Thaps25156;Parent=Thaps25156;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 389356 389880 . - 0 ID=Thaps25156;Parent=Thaps25156;rank=1 chr16a . exon 389356 389880 . - . ID=Thaps25156.1;Parent=Thaps25156;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 382103 382399 . - . ID=Thaps264386;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP7];external_name=MYB26;logic_name=jgi_thaps3 chr16a ensembl transcript 382103 382399 . - . ID=Thaps264386;Parent=Thaps264386;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 382103 382187 . - 0 ID=Thaps264386;Parent=Thaps264386;rank=2 chr16a . exon 382103 382187 . - . ID=Thaps264386.2;Parent=Thaps264386;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 382275 382399 . - 0 ID=Thaps264386;Parent=Thaps264386;rank=1 chr16a . exon 382275 382399 . - . ID=Thaps264386.1;Parent=Thaps264386;constitutive=1;ensembl_end_phase=2;rank=1 chr16a ensembl protein_coding_gene 383284 384935 . + . ID=Thaps264387;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP8];external_name=Thaps264387;logic_name=jgi_thaps3 chr16a ensembl transcript 383284 384935 . + . ID=Thaps264387;Parent=Thaps264387;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 383284 383359 . + 0 ID=Thaps264387;Parent=Thaps264387;rank=1 chr16a . exon 383284 383359 . + . ID=Thaps264387.1;Parent=Thaps264387;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 383390 383468 . + 0 ID=Thaps264387;Parent=Thaps264387;rank=2 chr16a . exon 383390 383468 . + . ID=Thaps264387.2;Parent=Thaps264387;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 383557 383607 . + 0 ID=Thaps264387;Parent=Thaps264387;rank=3 chr16a . exon 383557 383607 . + . ID=Thaps264387.3;Parent=Thaps264387;constitutive=1;rank=3 chr16a . CDS 383680 383801 . + 0 ID=Thaps264387;Parent=Thaps264387;rank=4 chr16a . exon 383680 383801 . + . ID=Thaps264387.4;Parent=Thaps264387;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 383913 384475 . + 0 ID=Thaps264387;Parent=Thaps264387;rank=5 chr16a . exon 383913 384475 . + . ID=Thaps264387.5;Parent=Thaps264387;constitutive=1;ensembl_end_phase=2;rank=5 chr16a . CDS 384527 384935 . + 0 ID=Thaps264387;Parent=Thaps264387;rank=6 chr16a . exon 384527 384935 . + . ID=Thaps264387.6;Parent=Thaps264387;constitutive=1;ensembl_end_phase=1;rank=6 chr16a ensembl protein_coding_gene 385504 386803 . - . ID=Thaps42594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCP9];external_name=Thaps42594;logic_name=jgi_thaps3 chr16a ensembl transcript 385504 386803 . - . ID=Thaps42594;Parent=Thaps42594;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 385504 385982 . - 0 ID=Thaps42594;Parent=Thaps42594;rank=3 chr16a . exon 385504 385982 . - . ID=Thaps42594.3;Parent=Thaps42594;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 386040 386195 . - 0 ID=Thaps42594;Parent=Thaps42594;rank=2 chr16a . exon 386040 386195 . - . ID=Thaps42594.2;Parent=Thaps42594;constitutive=1;rank=2 chr16a . CDS 386776 386803 . - 0 ID=Thaps42594;Parent=Thaps42594;rank=1 chr16a . exon 386776 386803 . - . ID=Thaps42594.1;Parent=Thaps42594;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . repeat_region 390462 390499 . ? . description=dust chr16a . repeat_region 390463 390499 . ? . description=trf chr16a . repeat_region 392049 393050 . ? . description=trf chr16a . repeat_region 392049 393050 . ? . description=trf chr16a . repeat_region 392193 393050 . ? . description=trf chr16a . repeat_region 394261 394268 . ? . description=dust chr16a . repeat_region 397627 397634 . ? . description=dust chr16a ensembl protein_coding_gene 390501 390926 . + . ID=Thaps10460;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ3];external_name=Thaps10460;logic_name=jgi_thaps3 chr16a ensembl transcript 390501 390926 . + . ID=Thaps10460;Parent=Thaps10460;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 390501 390926 . + 0 ID=Thaps10460;Parent=Thaps10460;rank=1 chr16a . exon 390501 390926 . + . ID=Thaps10460.1;Parent=Thaps10460;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 391981 394318 . - . ID=Thaps25157;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ4];external_name=Thaps25157;logic_name=jgi_thaps3 chr16a ensembl transcript 391981 394318 . - . ID=Thaps25157;Parent=Thaps25157;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 391981 392087 . - 0 ID=Thaps25157;Parent=Thaps25157;rank=5 chr16a . exon 391981 392087 . - . ID=Thaps25157.5;Parent=Thaps25157;constitutive=1;ensembl_end_phase=2;rank=5 chr16a . CDS 392660 392806 . - 0 ID=Thaps25157;Parent=Thaps25157;rank=4 chr16a . exon 392660 392806 . - . ID=Thaps25157.4;Parent=Thaps25157;constitutive=1;rank=4 chr16a . CDS 392895 393047 . - 0 ID=Thaps25157;Parent=Thaps25157;rank=3 chr16a . exon 392895 393047 . - . ID=Thaps25157.3;Parent=Thaps25157;constitutive=1;rank=3 chr16a . CDS 393130 393598 . - 0 ID=Thaps25157;Parent=Thaps25157;rank=2 chr16a . exon 393130 393598 . - . ID=Thaps25157.2;Parent=Thaps25157;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 394256 394318 . - 0 ID=Thaps25157;Parent=Thaps25157;rank=1 chr16a . exon 394256 394318 . - . ID=Thaps25157.1;Parent=Thaps25157;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 394795 399758 . + . ID=Thaps25158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ5];external_name=Thaps25158;logic_name=jgi_thaps3 chr16a ensembl transcript 394795 399758 . + . ID=Thaps25158;Parent=Thaps25158;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 394795 397343 . + 0 ID=Thaps25158;Parent=Thaps25158;rank=1 chr16a . exon 394795 397343 . + . ID=Thaps25158.1;Parent=Thaps25158;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 397365 397432 . + 0 ID=Thaps25158;Parent=Thaps25158;rank=2 chr16a . exon 397365 397432 . + . ID=Thaps25158.2;Parent=Thaps25158;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 397556 397596 . + 0 ID=Thaps25158;Parent=Thaps25158;rank=3 chr16a . exon 397556 397596 . + . ID=Thaps25158.3;Parent=Thaps25158;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 397626 399758 . + 0 ID=Thaps25158;Parent=Thaps25158;rank=4 chr16a . exon 397626 399758 . + . ID=Thaps25158.4;Parent=Thaps25158;constitutive=1;rank=4 chr16a ensembl protein_coding_gene 405709 409608 . - . ID=Thaps10465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ8];external_name=Thaps10465;logic_name=jgi_thaps3 chr16a ensembl transcript 405709 409608 . - . ID=Thaps10465;Parent=Thaps10465;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 405709 409608 . - 0 ID=Thaps10465;Parent=Thaps10465;rank=1 chr16a . exon 405709 409608 . - . ID=Thaps10465.1;Parent=Thaps10465;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 400123 402139 . - . ID=Thaps25159;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ6];external_name=Thaps25159;logic_name=jgi_thaps3 chr16a ensembl transcript 400123 402139 . - . ID=Thaps25159;Parent=Thaps25159;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 400123 401312 . - 0 ID=Thaps25159;Parent=Thaps25159;rank=4 chr16a . exon 400123 401312 . - . ID=Thaps25159.4;Parent=Thaps25159;constitutive=1;ensembl_end_phase=2;rank=4 chr16a . CDS 401401 401504 . - 0 ID=Thaps25159;Parent=Thaps25159;rank=3 chr16a . exon 401401 401504 . - . ID=Thaps25159.3;Parent=Thaps25159;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 401602 401800 . - 0 ID=Thaps25159;Parent=Thaps25159;rank=2 chr16a . exon 401602 401800 . - . ID=Thaps25159.2;Parent=Thaps25159;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 402103 402139 . - 0 ID=Thaps25159;Parent=Thaps25159;rank=1 chr16a . exon 402103 402139 . - . ID=Thaps25159.1;Parent=Thaps25159;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 402722 405197 . + . ID=Thaps25160;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ7];external_name=Thaps25160;logic_name=jgi_thaps3 chr16a ensembl transcript 402722 405197 . + . ID=Thaps25160;Parent=Thaps25160;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 402722 404375 . + 0 ID=Thaps25160;Parent=Thaps25160;rank=1 chr16a . exon 402722 404375 . + . ID=Thaps25160.1;Parent=Thaps25160;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 404418 404555 . + 0 ID=Thaps25160;Parent=Thaps25160;rank=2 chr16a . exon 404418 404555 . + . ID=Thaps25160.2;Parent=Thaps25160;constitutive=1;rank=2 chr16a . CDS 404662 405197 . + 0 ID=Thaps25160;Parent=Thaps25160;rank=3 chr16a . exon 404662 405197 . + . ID=Thaps25160.3;Parent=Thaps25160;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . repeat_region 410923 410947 . ? . description=dust chr16a . repeat_region 416758 416765 . ? . description=dust chr16a . repeat_region 419492 419501 . ? . description=dust chr16a ensembl protein_coding_gene 416877 417848 . + . ID=Thaps10468;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR1];external_name=Thaps10468;logic_name=jgi_thaps3 chr16a ensembl transcript 416877 417848 . + . ID=Thaps10468;Parent=Thaps10468;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 416877 417848 . + 0 ID=Thaps10468;Parent=Thaps10468;rank=1 chr16a . exon 416877 417848 . + . ID=Thaps10468.1;Parent=Thaps10468;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 410116 413894 . + . ID=Thaps25161;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCQ9];external_name=Thaps25161;logic_name=jgi_thaps3 chr16a ensembl transcript 410116 413894 . + . ID=Thaps25161;Parent=Thaps25161;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 410116 410157 . + 0 ID=Thaps25161;Parent=Thaps25161;rank=1 chr16a . exon 410116 410157 . + . ID=Thaps25161.1;Parent=Thaps25161;constitutive=1;rank=1 chr16a . CDS 410408 413602 . + 0 ID=Thaps25161;Parent=Thaps25161;rank=2 chr16a . exon 410408 413602 . + . ID=Thaps25161.2;Parent=Thaps25161;constitutive=1;rank=2 chr16a . CDS 413841 413894 . + 0 ID=Thaps25161;Parent=Thaps25161;rank=3 chr16a . exon 413841 413894 . + . ID=Thaps25161.3;Parent=Thaps25161;constitutive=1;rank=3 chr16a ensembl protein_coding_gene 414163 416667 . - . ID=Thaps25162;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR0];external_name=Thaps25162;logic_name=jgi_thaps3 chr16a ensembl transcript 414163 416667 . - . ID=Thaps25162;Parent=Thaps25162;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 414163 415346 . - 0 ID=Thaps25162;Parent=Thaps25162;rank=2 chr16a . exon 414163 415346 . - . ID=Thaps25162.2;Parent=Thaps25162;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 415425 416667 . - 0 ID=Thaps25162;Parent=Thaps25162;rank=1 chr16a . exon 415425 416667 . - . ID=Thaps25162.1;Parent=Thaps25162;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 417954 419318 . - . ID=Thaps25163;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR2];external_name=Thaps25163;logic_name=jgi_thaps3 chr16a ensembl transcript 417954 419318 . - . ID=Thaps25163;Parent=Thaps25163;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 417954 419318 . - 0 ID=Thaps25163;Parent=Thaps25163;rank=1 chr16a . exon 417954 419318 . - . ID=Thaps25163.1;Parent=Thaps25163;constitutive=1;rank=1 chr16a . repeat_region 421782 421811 . ? . description=trf chr16a ensembl protein_coding_gene 420169 424970 . + . ID=Thaps10470;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR3];external_name=Thaps10470;logic_name=jgi_thaps3 chr16a ensembl transcript 420169 424970 . + . ID=Thaps10470;Parent=Thaps10470;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 420169 420996 . + 0 ID=Thaps10470;Parent=Thaps10470;rank=1 chr16a . exon 420169 420996 . + . ID=Thaps10470.1;Parent=Thaps10470;constitutive=1;rank=1 chr16a . CDS 421197 421260 . + 0 ID=Thaps10470;Parent=Thaps10470;rank=2 chr16a . exon 421197 421260 . + . ID=Thaps10470.2;Parent=Thaps10470;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 421365 422341 . + 0 ID=Thaps10470;Parent=Thaps10470;rank=3 chr16a . exon 421365 422341 . + . ID=Thaps10470.3;Parent=Thaps10470;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 422410 423006 . + 0 ID=Thaps10470;Parent=Thaps10470;rank=4 chr16a . exon 422410 423006 . + . ID=Thaps10470.4;Parent=Thaps10470;constitutive=1;rank=4 chr16a . CDS 423396 423826 . + 0 ID=Thaps10470;Parent=Thaps10470;rank=5 chr16a . exon 423396 423826 . + . ID=Thaps10470.5;Parent=Thaps10470;constitutive=1;ensembl_end_phase=2;rank=5 chr16a . CDS 423915 424398 . + 0 ID=Thaps10470;Parent=Thaps10470;rank=6 chr16a . exon 423915 424398 . + . ID=Thaps10470.6;Parent=Thaps10470;constitutive=1;ensembl_end_phase=1;rank=6 chr16a . CDS 424490 424568 . + 0 ID=Thaps10470;Parent=Thaps10470;rank=7 chr16a . exon 424490 424568 . + . ID=Thaps10470.7;Parent=Thaps10470;constitutive=1;ensembl_end_phase=1;rank=7 chr16a . CDS 424684 424970 . + 0 ID=Thaps10470;Parent=Thaps10470;rank=8 chr16a . exon 424684 424970 . + . ID=Thaps10470.8;Parent=Thaps10470;constitutive=1;ensembl_end_phase=2;rank=8 chr16a ensembl protein_coding_gene 425420 426187 . - . ID=Thaps10471;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR4];external_name=Thaps10471;logic_name=jgi_thaps3 chr16a ensembl transcript 425420 426187 . - . ID=Thaps10471;Parent=Thaps10471;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 425420 425491 . - 0 ID=Thaps10471;Parent=Thaps10471;rank=2 chr16a . exon 425420 425491 . - . ID=Thaps10471.2;Parent=Thaps10471;constitutive=1;rank=2 chr16a . CDS 425564 426187 . - 0 ID=Thaps10471;Parent=Thaps10471;rank=1 chr16a . exon 425564 426187 . - . ID=Thaps10471.1;Parent=Thaps10471;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 426670 428016 . + . ID=Thaps10472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR5];external_name=Thaps10472;logic_name=jgi_thaps3 chr16a ensembl transcript 426670 428016 . + . ID=Thaps10472;Parent=Thaps10472;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 426670 428016 . + 0 ID=Thaps10472;Parent=Thaps10472;rank=1 chr16a . exon 426670 428016 . + . ID=Thaps10472.1;Parent=Thaps10472;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 429722 430597 . + . ID=Thaps25164;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR6];external_name=Thaps25164;logic_name=jgi_thaps3 chr16a ensembl transcript 429722 430597 . + . ID=Thaps25164;Parent=Thaps25164;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 429722 430597 . + 0 ID=Thaps25164;Parent=Thaps25164;rank=1 chr16a . exon 429722 430597 . + . ID=Thaps25164.1;Parent=Thaps25164;constitutive=1;rank=1 chr16a . repeat_region 433052 433060 . ? . description=dust chr16a . repeat_region 437195 437231 . ? . description=dust chr16a ensembl protein_coding_gene 431538 432872 . - . ID=Thaps10474;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR7];external_name=Thaps10474;logic_name=jgi_thaps3 chr16a ensembl transcript 431538 432872 . - . ID=Thaps10474;Parent=Thaps10474;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 431538 432872 . - 0 ID=Thaps10474;Parent=Thaps10474;rank=1 chr16a . exon 431538 432872 . - . ID=Thaps10474.1;Parent=Thaps10474;constitutive=1;rank=1 chr16a ensembl protein_coding_gene 433477 434596 . + . ID=Thaps10475;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR8];external_name=Thaps10475;logic_name=jgi_thaps3 chr16a ensembl transcript 433477 434596 . + . ID=Thaps10475;Parent=Thaps10475;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 433477 433965 . + 0 ID=Thaps10475;Parent=Thaps10475;rank=1 chr16a . exon 433477 433965 . + . ID=Thaps10475.1;Parent=Thaps10475;constitutive=1;rank=1 chr16a . CDS 434081 434596 . + 0 ID=Thaps10475;Parent=Thaps10475;rank=2 chr16a . exon 434081 434596 . + . ID=Thaps10475.2;Parent=Thaps10475;constitutive=1;rank=2 chr16a ensembl protein_coding_gene 436931 437896 . + . ID=Thaps37819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCR9];external_name=Thaps37819;logic_name=jgi_thaps3 chr16a ensembl transcript 436931 437896 . + . ID=Thaps37819;Parent=Thaps37819;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 436931 437057 . + 0 ID=Thaps37819;Parent=Thaps37819;rank=1 chr16a . exon 436931 437057 . + . ID=Thaps37819.1;Parent=Thaps37819;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . CDS 437240 437360 . + 0 ID=Thaps37819;Parent=Thaps37819;rank=2 chr16a . exon 437240 437360 . + . ID=Thaps37819.2;Parent=Thaps37819;constitutive=1;ensembl_end_phase=1;rank=2 chr16a . CDS 437504 437652 . + 0 ID=Thaps37819;Parent=Thaps37819;rank=3 chr16a . exon 437504 437652 . + . ID=Thaps37819.3;Parent=Thaps37819;constitutive=1;ensembl_end_phase=2;rank=3 chr16a . CDS 437757 437896 . + 0 ID=Thaps37819;Parent=Thaps37819;rank=4 chr16a . exon 437757 437896 . + . ID=Thaps37819.4;Parent=Thaps37819;constitutive=1;ensembl_end_phase=2;rank=4 chr16a ensembl protein_coding_gene 439642 443459 . - . ID=Thaps42599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS0];external_name=Thaps42599;logic_name=jgi_thaps3 chr16a ensembl transcript 439642 443459 . - . ID=Thaps42599;Parent=Thaps42599;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 439642 439944 . - 0 ID=Thaps42599;Parent=Thaps42599;rank=6 chr16a . exon 439642 439944 . - . ID=Thaps42599.6;Parent=Thaps42599;constitutive=1;rank=6 chr16a . CDS 440036 440245 . - 0 ID=Thaps42599;Parent=Thaps42599;rank=5 chr16a . CDS 440668 440838 . - 0 ID=Thaps42599;Parent=Thaps42599;rank=4 chr16a . CDS 441081 442016 . - 0 ID=Thaps42599;Parent=Thaps42599;rank=3 chr16a . CDS 442308 443314 . - 0 ID=Thaps42599;Parent=Thaps42599;rank=2 chr16a . CDS 443432 443459 . - 0 ID=Thaps42599;Parent=Thaps42599;rank=1 chr16a . repeat_region 448071 448206 . + . description=Gypsy3I_TP chr16a . repeat_region 448982 449005 . ? . description=trf chr16a ensembl snoRNA_gene 440507 440606 . + . ID=EPrTPOG00000000032;biotype=snoRNA;description=Small nucleolar RNA Z157/R69/R10 [Source:RFAM%3BAcc:RF00333];external_name=snoZ157;logic_name=ncrna_eg chr16a ensembl snoRNA 440507 440606 . + . ID=EPrTPOT00000000017;Parent=EPrTPOG00000000032;biotype=snoRNA;logic_name=ncrna_eg chr16a ensembl snoRNA_gene 440342 440441 . + . ID=EPrTPOG00000000072;biotype=snoRNA;description=Small nucleolar RNA Z157/R69/R10 [Source:RFAM%3BAcc:RF00333];external_name=snoZ157;logic_name=ncrna_eg chr16a ensembl snoRNA 440342 440441 . + . ID=EPrTPOT00000000072;Parent=EPrTPOG00000000072;biotype=snoRNA;logic_name=ncrna_eg chr16a . exon 440507 440606 . + . ID=EPrTPOE00000000032;Parent=EPrTPOT00000000017;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . exon 440342 440441 . + . ID=EPrTPOE00000000072;Parent=EPrTPOT00000000072;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 448491 449937 . + . ID=Thaps10479;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS3];external_name=Thaps10479;logic_name=jgi_thaps3 chr16a ensembl transcript 448491 449937 . + . ID=Thaps10479;Parent=Thaps10479;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 448491 448814 . + 0 ID=Thaps10479;Parent=Thaps10479;rank=1 chr16a . exon 448491 448814 . + . ID=Thaps10479.1;Parent=Thaps10479;constitutive=1;rank=1 chr16a . CDS 449086 449937 . + 0 ID=Thaps10479;Parent=Thaps10479;rank=2 chr16a . exon 449086 449937 . + . ID=Thaps10479.2;Parent=Thaps10479;constitutive=1;rank=2 chr16a ensembl protein_coding_gene 444832 445954 . - . ID=Thaps25166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS1];external_name=Thaps25166;logic_name=jgi_thaps3 chr16a ensembl transcript 444832 445954 . - . ID=Thaps25166;Parent=Thaps25166;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 444832 445025 . - 0 ID=Thaps25166;Parent=Thaps25166;rank=2 chr16a . exon 444832 445025 . - . ID=Thaps25166.2;Parent=Thaps25166;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 445141 445954 . - 0 ID=Thaps25166;Parent=Thaps25166;rank=1 chr16a . exon 445141 445954 . - . ID=Thaps25166.1;Parent=Thaps25166;constitutive=1;ensembl_end_phase=1;rank=1 chr16a ensembl protein_coding_gene 446546 447826 . + . ID=Thaps25167;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS2];external_name=Thaps25167;logic_name=jgi_thaps3 chr16a ensembl transcript 446546 447826 . + . ID=Thaps25167;Parent=Thaps25167;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 446546 447208 . + 0 ID=Thaps25167;Parent=Thaps25167;rank=1 chr16a . exon 446546 447208 . + . ID=Thaps25167.1;Parent=Thaps25167;constitutive=1;rank=1 chr16a . CDS 447254 447826 . + 0 ID=Thaps25167;Parent=Thaps25167;rank=2 chr16a . exon 447254 447826 . + . ID=Thaps25167.2;Parent=Thaps25167;constitutive=1;rank=2 chr16a . exon 440036 440245 . - . ID=Thaps42599.5;Parent=Thaps42599;constitutive=1;rank=5 chr16a . exon 440668 440838 . - . ID=Thaps42599.4;Parent=Thaps42599;constitutive=1;rank=4 chr16a . exon 441081 442016 . - . ID=Thaps42599.3;Parent=Thaps42599;constitutive=1;rank=3 chr16a . exon 442308 443314 . - . ID=Thaps42599.2;Parent=Thaps42599;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . exon 443432 443459 . - . ID=Thaps42599.1;Parent=Thaps42599;constitutive=1;ensembl_end_phase=1;rank=1 chr16a . repeat_region 451873 451900 . ? . description=dust chr16a ensembl protein_coding_gene 450502 458150 . + . ID=Thaps25168;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS4];external_name=Thaps25168;logic_name=jgi_thaps3 chr16a ensembl transcript 450502 458150 . + . ID=Thaps25168;Parent=Thaps25168;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 450502 451988 . + 0 ID=Thaps25168;Parent=Thaps25168;rank=1 chr16a . exon 450502 451988 . + . ID=Thaps25168.1;Parent=Thaps25168;constitutive=1;ensembl_end_phase=2;rank=1 chr16a . CDS 452080 454232 . + 0 ID=Thaps25168;Parent=Thaps25168;rank=2 chr16a . exon 452080 454232 . + . ID=Thaps25168.2;Parent=Thaps25168;constitutive=1;ensembl_end_phase=2;rank=2 chr16a . CDS 454323 454787 . + 0 ID=Thaps25168;Parent=Thaps25168;rank=3 chr16a . exon 454323 454787 . + . ID=Thaps25168.3;Parent=Thaps25168;constitutive=1;rank=3 chr16a . CDS 454861 458150 . + 0 ID=Thaps25168;Parent=Thaps25168;rank=4 chr16a . exon 454861 458150 . + . ID=Thaps25168.4;Parent=Thaps25168;constitutive=1;ensembl_end_phase=2;rank=4 chr16a ensembl protein_coding_gene 458687 459055 . - . ID=Thaps37790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCS5];external_name=Thaps37790;logic_name=jgi_thaps3 chr16a ensembl transcript 458687 459055 . - . ID=Thaps37790;Parent=Thaps37790;biotype=protein_coding;logic_name=jgi_thaps3 chr16a . CDS 458687 459055 . - 0 ID=Thaps37790;Parent=Thaps37790;rank=1 chr16a . exon 458687 459055 . - . ID=Thaps37790.1;Parent=Thaps37790;constitutive=1;rank=1 ##gff-version 3 ##sequence-region 19a_19 1 607239 chr19a_19 . repeat_region 1 48 . ? . description=trf chr19a_19 . repeat_region 1 48 . ? . description=dust chr19a_19 . repeat_region 2510 3144 . - . description=Gypsy3LTR_TP chr19a_19 . repeat_region 2589 2645 . ? . description=trf chr19a_19 ensembl protein_coding_gene 4143 5318 . + . ID=Thaps11059;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCY0];external_name=Thaps11059;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 4143 5318 . + . ID=Thaps11059;Parent=Thaps11059;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 4143 5318 . + 0 ID=Thaps11059;Parent=Thaps11059;rank=1 chr19a_19 . exon 4143 5318 . + . ID=Thaps11059.1;Parent=Thaps11059;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 8302 11972 . + . ID=Thaps11061;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCY2];external_name=Thaps11061;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 8302 11972 . + . ID=Thaps11061;Parent=Thaps11061;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 8302 10064 . + 0 ID=Thaps11061;Parent=Thaps11061;rank=1 chr19a_19 . exon 8302 10064 . + . ID=Thaps11061.1;Parent=Thaps11061;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 10312 10454 . + 0 ID=Thaps11061;Parent=Thaps11061;rank=2 chr19a_19 . CDS 10564 11972 . + 0 ID=Thaps11061;Parent=Thaps11061;rank=3 chr19a_19 ensembl protein_coding_gene 253 2014 . + . ID=Thaps25444;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCX9];external_name=Thaps25444;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 253 2014 . + . ID=Thaps25444;Parent=Thaps25444;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 253 783 . + 0 ID=Thaps25444;Parent=Thaps25444;rank=1 chr19a_19 . exon 253 783 . + . ID=Thaps25444.1;Parent=Thaps25444;constitutive=1;rank=1 chr19a_19 . CDS 1007 2014 . + 0 ID=Thaps25444;Parent=Thaps25444;rank=2 chr19a_19 . exon 1007 2014 . + . ID=Thaps25444.2;Parent=Thaps25444;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 5497 7544 . - . ID=Thaps38258;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LCY1];external_name=Thaps38258;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 5497 7544 . - . ID=Thaps38258;Parent=Thaps38258;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 5497 5819 . - 0 ID=Thaps38258;Parent=Thaps38258;rank=3 chr19a_19 . exon 5497 5819 . - . ID=Thaps38258.3;Parent=Thaps38258;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 5933 7088 . - 0 ID=Thaps38258;Parent=Thaps38258;rank=2 chr19a_19 . exon 5933 7088 . - . ID=Thaps38258.2;Parent=Thaps38258;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 7167 7544 . - 0 ID=Thaps38258;Parent=Thaps38258;rank=1 chr19a_19 . exon 7167 7544 . - . ID=Thaps38258.1;Parent=Thaps38258;constitutive=1;rank=1 chr19a_19 . exon 10312 10454 . + . ID=Thaps11061.2;Parent=Thaps11061;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . exon 10564 11972 . + . ID=Thaps11061.3;Parent=Thaps11061;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 14984 17036 . + . ID=Thaps11063;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCY4];external_name=Thaps11063;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 14984 17036 . + . ID=Thaps11063;Parent=Thaps11063;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 14984 16012 . + 0 ID=Thaps11063;Parent=Thaps11063;rank=1 chr19a_19 . exon 14984 16012 . + . ID=Thaps11063.1;Parent=Thaps11063;constitutive=1;rank=1 chr19a_19 . CDS 16050 17036 . + 0 ID=Thaps11063;Parent=Thaps11063;rank=2 chr19a_19 . exon 16050 17036 . + . ID=Thaps11063.2;Parent=Thaps11063;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 12744 14174 . + . ID=Thaps25446;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCY3];external_name=Thaps25446;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 12744 14174 . + . ID=Thaps25446;Parent=Thaps25446;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 12744 14174 . + 0 ID=Thaps25446;Parent=Thaps25446;rank=1 chr19a_19 . exon 12744 14174 . + . ID=Thaps25446.1;Parent=Thaps25446;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 19484 21082 . - . ID=Thaps25447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCY5];external_name=Thaps25447;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 19484 21082 . - . ID=Thaps25447;Parent=Thaps25447;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 19484 20640 . - 0 ID=Thaps25447;Parent=Thaps25447;rank=3 chr19a_19 . exon 19484 20640 . - . ID=Thaps25447.3;Parent=Thaps25447;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 20762 20900 . - 0 ID=Thaps25447;Parent=Thaps25447;rank=2 chr19a_19 . CDS 20996 21082 . - 0 ID=Thaps25447;Parent=Thaps25447;rank=1 chr19a_19 . repeat_region 20929 20991 . ? . description=dust chr19a_19 . repeat_region 22050 22133 . ? . description=dust chr19a_19 . repeat_region 22078 22133 . ? . description=trf chr19a_19 . repeat_region 22080 22133 . ? . description=trf chr19a_19 . exon 20762 20900 . - . ID=Thaps25447.2;Parent=Thaps25447;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . exon 20996 21082 . - . ID=Thaps25447.1;Parent=Thaps25447;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 21873 22859 . - . ID=Thaps25448;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCY6];external_name=Thaps25448;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 21873 22859 . - . ID=Thaps25448;Parent=Thaps25448;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 21873 21917 . - 0 ID=Thaps25448;Parent=Thaps25448;rank=4 chr19a_19 . exon 21873 21917 . - . ID=Thaps25448.4;Parent=Thaps25448;constitutive=1;rank=4 chr19a_19 . CDS 22025 22165 . - 0 ID=Thaps25448;Parent=Thaps25448;rank=3 chr19a_19 . exon 22025 22165 . - . ID=Thaps25448.3;Parent=Thaps25448;constitutive=1;rank=3 chr19a_19 . CDS 22301 22467 . - 0 ID=Thaps25448;Parent=Thaps25448;rank=2 chr19a_19 . exon 22301 22467 . - . ID=Thaps25448.2;Parent=Thaps25448;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 22640 22859 . - 0 ID=Thaps25448;Parent=Thaps25448;rank=1 chr19a_19 . exon 22640 22859 . - . ID=Thaps25448.1;Parent=Thaps25448;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 23145 30732 . - . ID=Thaps25449;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCY7];external_name=Thaps25449;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 23145 30732 . - . ID=Thaps25449;Parent=Thaps25449;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 23145 29662 . - 0 ID=Thaps25449;Parent=Thaps25449;rank=3 chr19a_19 . exon 23145 29662 . - . ID=Thaps25449.3;Parent=Thaps25449;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 29829 30464 . - 0 ID=Thaps25449;Parent=Thaps25449;rank=2 chr19a_19 . exon 29829 30464 . - . ID=Thaps25449.2;Parent=Thaps25449;constitutive=1;rank=2 chr19a_19 . CDS 30627 30732 . - 0 ID=Thaps25449;Parent=Thaps25449;rank=1 chr19a_19 ensembl protein_coding_gene 33308 34051 . + . ID=Thaps11068;biotype=protein_coding;description=26S proteasome subunit [Source:UniProtKB/TrEMBL%3BAcc:B8LCY9];external_name=PSA6;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 33308 34051 . + . ID=Thaps11068;Parent=Thaps11068;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 33308 34051 . + 0 ID=Thaps11068;Parent=Thaps11068;rank=1 chr19a_19 . exon 33308 34051 . + . ID=Thaps11068.1;Parent=Thaps11068;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 34390 35790 . - . ID=Thaps11069;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ0];external_name=Thaps11069;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 34390 35790 . - . ID=Thaps11069;Parent=Thaps11069;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 34390 35790 . - 0 ID=Thaps11069;Parent=Thaps11069;rank=1 chr19a_19 . exon 34390 35790 . - . ID=Thaps11069.1;Parent=Thaps11069;constitutive=1;rank=1 chr19a_19 . exon 30627 30732 . - . ID=Thaps25449.1;Parent=Thaps25449;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 31369 32655 . + . ID=Thaps25450;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCY8];external_name=Thaps25450;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 31369 32655 . + . ID=Thaps25450;Parent=Thaps25450;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 31369 32655 . + 0 ID=Thaps25450;Parent=Thaps25450;rank=1 chr19a_19 . exon 31369 32655 . + . ID=Thaps25450.1;Parent=Thaps25450;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 37256 42013 . + . ID=Thaps25451;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ1];external_name=Thaps25451;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 37256 42013 . + . ID=Thaps25451;Parent=Thaps25451;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 37256 40354 . + 0 ID=Thaps25451;Parent=Thaps25451;rank=1 chr19a_19 . exon 37256 40354 . + . ID=Thaps25451.1;Parent=Thaps25451;constitutive=1;rank=1 chr19a_19 . CDS 40445 42013 . + 0 ID=Thaps25451;Parent=Thaps25451;rank=2 chr19a_19 . repeat_region 46218 46238 . ? . description=trf chr19a_19 ensembl protein_coding_gene 46969 48636 . + . ID=Thaps11072;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ3];external_name=Thaps11072;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 46969 48636 . + . ID=Thaps11072;Parent=Thaps11072;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 46969 48636 . + 0 ID=Thaps11072;Parent=Thaps11072;rank=1 chr19a_19 . exon 46969 48636 . + . ID=Thaps11072.1;Parent=Thaps11072;constitutive=1;rank=1 chr19a_19 . exon 40445 42013 . + . ID=Thaps25451.2;Parent=Thaps25451;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 44312 46142 . - . ID=Thaps25452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ2];external_name=Thaps25452;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 44312 46142 . - . ID=Thaps25452;Parent=Thaps25452;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 44312 45498 . - 0 ID=Thaps25452;Parent=Thaps25452;rank=3 chr19a_19 . exon 44312 45498 . - . ID=Thaps25452.3;Parent=Thaps25452;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 45763 45809 . - 0 ID=Thaps25452;Parent=Thaps25452;rank=2 chr19a_19 . exon 45763 45809 . - . ID=Thaps25452.2;Parent=Thaps25452;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 45856 46142 . - 0 ID=Thaps25452;Parent=Thaps25452;rank=1 chr19a_19 . exon 45856 46142 . - . ID=Thaps25452.1;Parent=Thaps25452;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . repeat_region 53398 53406 . ? . description=dust chr19a_19 ensembl protein_coding_gene 52063 53394 . + . ID=Thaps11074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ5];external_name=Thaps11074;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 52063 53394 . + . ID=Thaps11074;Parent=Thaps11074;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 52063 52540 . + 0 ID=Thaps11074;Parent=Thaps11074;rank=1 chr19a_19 . exon 52063 52540 . + . ID=Thaps11074.1;Parent=Thaps11074;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 52625 53394 . + 0 ID=Thaps11074;Parent=Thaps11074;rank=2 chr19a_19 . exon 52625 53394 . + . ID=Thaps11074.2;Parent=Thaps11074;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 ensembl protein_coding_gene 55337 59769 . + . ID=Thaps11075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ7];external_name=Thaps11075;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 55337 59769 . + . ID=Thaps11075;Parent=Thaps11075;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 55337 55586 . + 0 ID=Thaps11075;Parent=Thaps11075;rank=1 chr19a_19 . exon 55337 55586 . + . ID=Thaps11075.1;Parent=Thaps11075;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 55687 55916 . + 0 ID=Thaps11075;Parent=Thaps11075;rank=2 chr19a_19 . exon 55687 55916 . + . ID=Thaps11075.2;Parent=Thaps11075;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 56007 56601 . + 0 ID=Thaps11075;Parent=Thaps11075;rank=3 chr19a_19 . exon 56007 56601 . + . ID=Thaps11075.3;Parent=Thaps11075;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 56702 56824 . + 0 ID=Thaps11075;Parent=Thaps11075;rank=4 chr19a_19 . exon 56702 56824 . + . ID=Thaps11075.4;Parent=Thaps11075;constitutive=1;rank=4 chr19a_19 . CDS 56897 57136 . + 0 ID=Thaps11075;Parent=Thaps11075;rank=5 chr19a_19 . exon 56897 57136 . + . ID=Thaps11075.5;Parent=Thaps11075;constitutive=1;rank=5 chr19a_19 . CDS 57222 58253 . + 0 ID=Thaps11075;Parent=Thaps11075;rank=6 chr19a_19 . exon 57222 58253 . + . ID=Thaps11075.6;Parent=Thaps11075;constitutive=1;rank=6 chr19a_19 . CDS 58341 58406 . + 0 ID=Thaps11075;Parent=Thaps11075;rank=7 chr19a_19 . exon 58341 58406 . + . ID=Thaps11075.7;Parent=Thaps11075;constitutive=1;rank=7 chr19a_19 . CDS 58511 59146 . + 0 ID=Thaps11075;Parent=Thaps11075;rank=8 chr19a_19 . exon 58511 59146 . + . ID=Thaps11075.8;Parent=Thaps11075;constitutive=1;rank=8 chr19a_19 . CDS 59231 59769 . + 0 ID=Thaps11075;Parent=Thaps11075;rank=9 chr19a_19 . exon 59231 59769 . + . ID=Thaps11075.9;Parent=Thaps11075;constitutive=1;ensembl_end_phase=2;rank=9 chr19a_19 ensembl protein_coding_gene 50214 51491 . + . ID=Thaps25453;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ4];external_name=Thaps25453;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 50214 51491 . + . ID=Thaps25453;Parent=Thaps25453;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 50214 51491 . + 0 ID=Thaps25453;Parent=Thaps25453;rank=1 chr19a_19 . exon 50214 51491 . + . ID=Thaps25453.1;Parent=Thaps25453;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 54297 54863 . + . ID=Thaps38240;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ6];external_name=Thaps38240;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 54297 54863 . + . ID=Thaps38240;Parent=Thaps38240;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 54297 54863 . + 0 ID=Thaps38240;Parent=Thaps38240;rank=1 chr19a_19 . exon 54297 54863 . + . ID=Thaps38240.1;Parent=Thaps38240;constitutive=1;rank=1 chr19a_19 . repeat_region 68485 68506 . ? . description=trf chr19a_19 ensembl protein_coding_gene 59919 64426 . - . ID=Thaps11076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ8];external_name=Thaps11076;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 59919 64426 . - . ID=Thaps11076;Parent=Thaps11076;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 59919 60508 . - 0 ID=Thaps11076;Parent=Thaps11076;rank=8 chr19a_19 . exon 59919 60508 . - . ID=Thaps11076.8;Parent=Thaps11076;constitutive=1;ensembl_end_phase=2;rank=8 chr19a_19 . CDS 60593 61228 . - 0 ID=Thaps11076;Parent=Thaps11076;rank=7 chr19a_19 . exon 60593 61228 . - . ID=Thaps11076.7;Parent=Thaps11076;constitutive=1;rank=7 chr19a_19 . CDS 61333 61398 . - 0 ID=Thaps11076;Parent=Thaps11076;rank=6 chr19a_19 . exon 61333 61398 . - . ID=Thaps11076.6;Parent=Thaps11076;constitutive=1;rank=6 chr19a_19 . CDS 61486 62547 . - 0 ID=Thaps11076;Parent=Thaps11076;rank=5 chr19a_19 . exon 61486 62547 . - . ID=Thaps11076.5;Parent=Thaps11076;constitutive=1;rank=5 chr19a_19 . CDS 62638 62877 . - 0 ID=Thaps11076;Parent=Thaps11076;rank=4 chr19a_19 . exon 62638 62877 . - . ID=Thaps11076.4;Parent=Thaps11076;constitutive=1;rank=4 chr19a_19 . CDS 62964 63086 . - 0 ID=Thaps11076;Parent=Thaps11076;rank=3 chr19a_19 . exon 62964 63086 . - . ID=Thaps11076.3;Parent=Thaps11076;constitutive=1;rank=3 chr19a_19 . CDS 63178 63772 . - 0 ID=Thaps11076;Parent=Thaps11076;rank=2 chr19a_19 . exon 63178 63772 . - . ID=Thaps11076.2;Parent=Thaps11076;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 63863 64426 . - 0 ID=Thaps11076;Parent=Thaps11076;rank=1 chr19a_19 . exon 63863 64426 . - . ID=Thaps11076.1;Parent=Thaps11076;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 65241 72097 . + . ID=Thaps11077;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LCZ9];external_name=Thaps11077;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 65241 72097 . + . ID=Thaps11077;Parent=Thaps11077;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 65241 65297 . + 0 ID=Thaps11077;Parent=Thaps11077;rank=1 chr19a_19 . exon 65241 65297 . + . ID=Thaps11077.1;Parent=Thaps11077;constitutive=1;rank=1 chr19a_19 . CDS 65374 65528 . + 0 ID=Thaps11077;Parent=Thaps11077;rank=2 chr19a_19 . exon 65374 65528 . + . ID=Thaps11077.2;Parent=Thaps11077;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 65592 65826 . + 0 ID=Thaps11077;Parent=Thaps11077;rank=3 chr19a_19 . exon 65592 65826 . + . ID=Thaps11077.3;Parent=Thaps11077;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 66006 70061 . + 0 ID=Thaps11077;Parent=Thaps11077;rank=4 chr19a_19 . exon 66006 70061 . + . ID=Thaps11077.4;Parent=Thaps11077;constitutive=1;rank=4 chr19a_19 . CDS 70299 70455 . + 0 ID=Thaps11077;Parent=Thaps11077;rank=5 chr19a_19 . CDS 70550 71262 . + 0 ID=Thaps11077;Parent=Thaps11077;rank=6 chr19a_19 . CDS 71342 71483 . + 0 ID=Thaps11077;Parent=Thaps11077;rank=7 chr19a_19 . CDS 71735 71871 . + 0 ID=Thaps11077;Parent=Thaps11077;rank=8 chr19a_19 . CDS 71960 72097 . + 0 ID=Thaps11077;Parent=Thaps11077;rank=9 chr19a_19 . repeat_region 72113 72134 . ? . description=dust chr19a_19 . exon 70299 70455 . + . ID=Thaps11077.5;Parent=Thaps11077;constitutive=1;ensembl_end_phase=1;rank=5 chr19a_19 . exon 70550 71262 . + . ID=Thaps11077.6;Parent=Thaps11077;constitutive=1;ensembl_end_phase=2;rank=6 chr19a_19 . exon 71342 71483 . + . ID=Thaps11077.7;Parent=Thaps11077;constitutive=1;ensembl_end_phase=1;rank=7 chr19a_19 . exon 71735 71871 . + . ID=Thaps11077.8;Parent=Thaps11077;constitutive=1;ensembl_end_phase=2;rank=8 chr19a_19 . exon 71960 72097 . + . ID=Thaps11077.9;Parent=Thaps11077;constitutive=1;rank=9 chr19a_19 ensembl protein_coding_gene 72340 73380 . - . ID=Thaps11078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD00];external_name=Thaps11078;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 72340 73380 . - . ID=Thaps11078;Parent=Thaps11078;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 72340 73380 . - 0 ID=Thaps11078;Parent=Thaps11078;rank=1 chr19a_19 . exon 72340 73380 . - . ID=Thaps11078.1;Parent=Thaps11078;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 74247 75035 . + . ID=Thaps11079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD01];external_name=Thaps11079;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 74247 75035 . + . ID=Thaps11079;Parent=Thaps11079;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 74247 75035 . + 0 ID=Thaps11079;Parent=Thaps11079;rank=1 chr19a_19 . exon 74247 75035 . + . ID=Thaps11079.1;Parent=Thaps11079;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 78085 79290 . - . ID=Thaps11081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD03];external_name=Thaps11081;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 78085 79290 . - . ID=Thaps11081;Parent=Thaps11081;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 78085 79290 . - 0 ID=Thaps11081;Parent=Thaps11081;rank=1 chr19a_19 . exon 78085 79290 . - . ID=Thaps11081.1;Parent=Thaps11081;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 76033 76647 . - . ID=Thaps16842;biotype=protein_coding;description=Serine acetyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8LD02];external_name=SAT1;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 76033 76647 . - . ID=Thaps16842;Parent=Thaps16842;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 76033 76412 . - 0 ID=Thaps16842;Parent=Thaps16842;rank=2 chr19a_19 . exon 76033 76412 . - . ID=Thaps16842.2;Parent=Thaps16842;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 76479 76647 . - 0 ID=Thaps16842;Parent=Thaps16842;rank=1 chr19a_19 . exon 76479 76647 . - . ID=Thaps16842.1;Parent=Thaps16842;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . repeat_region 82756 82804 . ? . description=trf chr19a_19 ensembl protein_coding_gene 86810 92799 . - . ID=Thaps11084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD06];external_name=Thaps11084;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 86810 92799 . - . ID=Thaps11084;Parent=Thaps11084;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 86810 86947 . - 0 ID=Thaps11084;Parent=Thaps11084;rank=9 chr19a_19 . exon 86810 86947 . - . ID=Thaps11084.9;Parent=Thaps11084;constitutive=1;rank=9 chr19a_19 . CDS 87035 87171 . - 0 ID=Thaps11084;Parent=Thaps11084;rank=8 chr19a_19 . exon 87035 87171 . - . ID=Thaps11084.8;Parent=Thaps11084;constitutive=1;ensembl_end_phase=2;rank=8 chr19a_19 . CDS 87422 87563 . - 0 ID=Thaps11084;Parent=Thaps11084;rank=7 chr19a_19 . exon 87422 87563 . - . ID=Thaps11084.7;Parent=Thaps11084;constitutive=1;ensembl_end_phase=1;rank=7 chr19a_19 . CDS 87643 88355 . - 0 ID=Thaps11084;Parent=Thaps11084;rank=6 chr19a_19 . exon 87643 88355 . - . ID=Thaps11084.6;Parent=Thaps11084;constitutive=1;ensembl_end_phase=2;rank=6 chr19a_19 . CDS 88451 88766 . - 0 ID=Thaps11084;Parent=Thaps11084;rank=5 chr19a_19 . exon 88451 88766 . - . ID=Thaps11084.5;Parent=Thaps11084;constitutive=1;ensembl_end_phase=1;rank=5 chr19a_19 . CDS 88844 91570 . - 0 ID=Thaps11084;Parent=Thaps11084;rank=4 chr19a_19 . exon 88844 91570 . - . ID=Thaps11084.4;Parent=Thaps11084;constitutive=1;rank=4 chr19a_19 . CDS 91655 91812 . - 0 ID=Thaps11084;Parent=Thaps11084;rank=3 chr19a_19 . CDS 91870 92717 . - 0 ID=Thaps11084;Parent=Thaps11084;rank=2 chr19a_19 . CDS 92753 92799 . - 0 ID=Thaps11084;Parent=Thaps11084;rank=1 chr19a_19 ensembl protein_coding_gene 79840 80625 . - . ID=Thaps264570;biotype=protein_coding;description=Phosphatidylinositol phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8LD04];external_name=Thaps264570;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 79840 80625 . - . ID=Thaps264570;Parent=Thaps264570;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 79840 80125 . - 0 ID=Thaps264570;Parent=Thaps264570;rank=4 chr19a_19 . exon 79840 80125 . - . ID=Thaps264570.4;Parent=Thaps264570;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 80150 80288 . - 0 ID=Thaps264570;Parent=Thaps264570;rank=3 chr19a_19 . exon 80150 80288 . - . ID=Thaps264570.3;Parent=Thaps264570;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 80349 80452 . - 0 ID=Thaps264570;Parent=Thaps264570;rank=2 chr19a_19 . exon 80349 80452 . - . ID=Thaps264570.2;Parent=Thaps264570;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 80468 80625 . - 0 ID=Thaps264570;Parent=Thaps264570;rank=1 chr19a_19 . exon 80468 80625 . - . ID=Thaps264570.1;Parent=Thaps264570;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 84691 86135 . + . ID=Thaps38216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD05];external_name=Thaps38216;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 84691 86135 . + . ID=Thaps38216;Parent=Thaps38216;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 84691 85889 . + 0 ID=Thaps38216;Parent=Thaps38216;rank=1 chr19a_19 . exon 84691 85889 . + . ID=Thaps38216.1;Parent=Thaps38216;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 85985 86135 . + 0 ID=Thaps38216;Parent=Thaps38216;rank=2 chr19a_19 . exon 85985 86135 . + . ID=Thaps38216.2;Parent=Thaps38216;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . biological_region 94174 94175 0.999 + . logic_name=eponine chr19a_19 . biological_region 94638 94638 0.999 + . logic_name=eponine chr19a_19 . repeat_region 99285 99292 . ? . description=dust chr19a_19 . exon 91655 91812 . - . ID=Thaps11084.3;Parent=Thaps11084;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . exon 91870 92717 . - . ID=Thaps11084.2;Parent=Thaps11084;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . exon 92753 92799 . - . ID=Thaps11084.1;Parent=Thaps11084;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 94043 97140 . + . ID=Thaps11085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD07];external_name=Thaps11085;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 94043 97140 . + . ID=Thaps11085;Parent=Thaps11085;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 94043 96733 . + 0 ID=Thaps11085;Parent=Thaps11085;rank=1 chr19a_19 . exon 94043 96733 . + . ID=Thaps11085.1;Parent=Thaps11085;constitutive=1;rank=1 chr19a_19 . CDS 96823 97140 . + 0 ID=Thaps11085;Parent=Thaps11085;rank=2 chr19a_19 . exon 96823 97140 . + . ID=Thaps11085.2;Parent=Thaps11085;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 98574 99150 . - . ID=Thaps11086;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD08];external_name=Thaps11086;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 98574 99150 . - . ID=Thaps11086;Parent=Thaps11086;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 98574 98848 . - 0 ID=Thaps11086;Parent=Thaps11086;rank=2 chr19a_19 . exon 98574 98848 . - . ID=Thaps11086.2;Parent=Thaps11086;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 99090 99150 . - 0 ID=Thaps11086;Parent=Thaps11086;rank=1 chr19a_19 . exon 99090 99150 . - . ID=Thaps11086.1;Parent=Thaps11086;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . repeat_region 101454 101487 . ? . description=trf chr19a_19 . repeat_region 107454 107484 . ? . description=trf chr19a_19 . repeat_region 107454 107496 . ? . description=trf chr19a_19 ensembl protein_coding_gene 99584 100000 . - . ID=Thaps11087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD09];external_name=Thaps11087;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 99584 100000 . - . ID=Thaps11087;Parent=Thaps11087;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 99584 100000 . - 0 ID=Thaps11087;Parent=Thaps11087;rank=1 chr19a_19 . exon 99584 100000 . - . ID=Thaps11087.1;Parent=Thaps11087;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 101282 103267 . + . ID=Thaps11088;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD10];external_name=Thaps11088;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 101282 103267 . + . ID=Thaps11088;Parent=Thaps11088;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 101282 102189 . + 0 ID=Thaps11088;Parent=Thaps11088;rank=1 chr19a_19 . exon 101282 102189 . + . ID=Thaps11088.1;Parent=Thaps11088;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 102259 103267 . + 0 ID=Thaps11088;Parent=Thaps11088;rank=2 chr19a_19 . exon 102259 103267 . + . ID=Thaps11088.2;Parent=Thaps11088;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 ensembl protein_coding_gene 104997 106262 . + . ID=Thaps11089;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD12];external_name=Thaps11089;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 104997 106262 . + . ID=Thaps11089;Parent=Thaps11089;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 104997 106262 . + 0 ID=Thaps11089;Parent=Thaps11089;rank=1 chr19a_19 . exon 104997 106262 . + . ID=Thaps11089.1;Parent=Thaps11089;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 103365 104327 . - . ID=Thaps16378;biotype=protein_coding;description=Dolichylphosphate beta-glucosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8LD11];external_name=Thaps16378;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 103365 104327 . - . ID=Thaps16378;Parent=Thaps16378;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 103365 103933 . - 0 ID=Thaps16378;Parent=Thaps16378;rank=3 chr19a_19 . exon 103365 103933 . - . ID=Thaps16378.3;Parent=Thaps16378;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 103985 104047 . - 0 ID=Thaps16378;Parent=Thaps16378;rank=2 chr19a_19 . exon 103985 104047 . - . ID=Thaps16378.2;Parent=Thaps16378;constitutive=1;rank=2 chr19a_19 . CDS 104111 104327 . - 0 ID=Thaps16378;Parent=Thaps16378;rank=1 chr19a_19 . exon 104111 104327 . - . ID=Thaps16378.1;Parent=Thaps16378;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 107356 108943 . + . ID=Thaps25456;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD13];external_name=Thaps25456;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 107356 108943 . + . ID=Thaps25456;Parent=Thaps25456;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 107356 108300 . + 0 ID=Thaps25456;Parent=Thaps25456;rank=1 chr19a_19 . exon 107356 108300 . + . ID=Thaps25456.1;Parent=Thaps25456;constitutive=1;rank=1 chr19a_19 . CDS 108384 108510 . + 0 ID=Thaps25456;Parent=Thaps25456;rank=2 chr19a_19 . exon 108384 108510 . + . ID=Thaps25456.2;Parent=Thaps25456;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 108585 108943 . + 0 ID=Thaps25456;Parent=Thaps25456;rank=3 chr19a_19 . exon 108585 108943 . + . ID=Thaps25456.3;Parent=Thaps25456;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 110058 112685 . + . ID=Thaps11091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD14];external_name=Thaps11091;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 110058 112685 . + . ID=Thaps11091;Parent=Thaps11091;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 110058 111296 . + 0 ID=Thaps11091;Parent=Thaps11091;rank=1 chr19a_19 . exon 110058 111296 . + . ID=Thaps11091.1;Parent=Thaps11091;constitutive=1;rank=1 chr19a_19 . CDS 111377 111639 . + 0 ID=Thaps11091;Parent=Thaps11091;rank=2 chr19a_19 . exon 111377 111639 . + . ID=Thaps11091.2;Parent=Thaps11091;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 111729 112203 . + 0 ID=Thaps11091;Parent=Thaps11091;rank=3 chr19a_19 . exon 111729 112203 . + . ID=Thaps11091.3;Parent=Thaps11091;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 112279 112407 . + 0 ID=Thaps11091;Parent=Thaps11091;rank=4 chr19a_19 . exon 112279 112407 . + . ID=Thaps11091.4;Parent=Thaps11091;constitutive=1;rank=4 chr19a_19 . CDS 112486 112578 . + 0 ID=Thaps11091;Parent=Thaps11091;rank=5 chr19a_19 . exon 112486 112578 . + . ID=Thaps11091.5;Parent=Thaps11091;constitutive=1;rank=5 chr19a_19 . CDS 112641 112685 . + 0 ID=Thaps11091;Parent=Thaps11091;rank=6 chr19a_19 . exon 112641 112685 . + . ID=Thaps11091.6;Parent=Thaps11091;constitutive=1;rank=6 chr19a_19 ensembl protein_coding_gene 114786 116346 . - . ID=Thaps11093;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD16];external_name=Thaps11093;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 114786 116346 . - . ID=Thaps11093;Parent=Thaps11093;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 114786 116164 . - 0 ID=Thaps11093;Parent=Thaps11093;rank=2 chr19a_19 . exon 114786 116164 . - . ID=Thaps11093.2;Parent=Thaps11093;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 116220 116346 . - 0 ID=Thaps11093;Parent=Thaps11093;rank=1 chr19a_19 . exon 116220 116346 . - . ID=Thaps11093.1;Parent=Thaps11093;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 118299 120448 . + . ID=Thaps25457;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD17];external_name=Thaps25457;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 118299 120448 . + . ID=Thaps25457;Parent=Thaps25457;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 118299 120134 . + 0 ID=Thaps25457;Parent=Thaps25457;rank=1 chr19a_19 . exon 118299 120134 . + . ID=Thaps25457.1;Parent=Thaps25457;constitutive=1;rank=1 chr19a_19 . CDS 120359 120448 . + 0 ID=Thaps25457;Parent=Thaps25457;rank=2 chr19a_19 ensembl protein_coding_gene 112813 113379 . - . ID=Thaps38285;biotype=protein_coding;description=Peptide methionine sulfoxide reductase [Source:UniProtKB/TrEMBL%3BAcc:B8LD15];external_name=PMSR1;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 112813 113379 . - . ID=Thaps38285;Parent=Thaps38285;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 112813 113261 . - 0 ID=Thaps38285;Parent=Thaps38285;rank=2 chr19a_19 . exon 112813 113261 . - . ID=Thaps38285.2;Parent=Thaps38285;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 113346 113379 . - 0 ID=Thaps38285;Parent=Thaps38285;rank=1 chr19a_19 . exon 113346 113379 . - . ID=Thaps38285.1;Parent=Thaps38285;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . repeat_region 121941 122005 . ? . description=dust chr19a_19 . repeat_region 121947 121979 . ? . description=trf chr19a_19 . repeat_region 122263 122322 . ? . description=dust chr19a_19 . repeat_region 123660 123709 . ? . description=trf chr19a_19 . repeat_region 126355 126367 . ? . description=dust chr19a_19 ensembl protein_coding_gene 128378 129247 . - . ID=Thaps11097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD21];external_name=Thaps11097;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 128378 129247 . - . ID=Thaps11097;Parent=Thaps11097;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 128378 129247 . - 0 ID=Thaps11097;Parent=Thaps11097;rank=1 chr19a_19 . exon 128378 129247 . - . ID=Thaps11097.1;Parent=Thaps11097;constitutive=1;rank=1 chr19a_19 . exon 120359 120448 . + . ID=Thaps25457.2;Parent=Thaps25457;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 120503 120972 . - . ID=Thaps264573;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD18];external_name=Thaps264573;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 120503 120972 . - . ID=Thaps264573;Parent=Thaps264573;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 120503 120972 . - 0 ID=Thaps264573;Parent=Thaps264573;rank=1 chr19a_19 . exon 120503 120972 . - . ID=Thaps264573.1;Parent=Thaps264573;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 124315 125709 . + . ID=Thaps269975;biotype=protein_coding;description=Putative uncharacterized protein ZFP21 [Source:UniProtKB/TrEMBL%3BAcc:B8LD19];external_name=ZFP21;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 124315 125709 . + . ID=Thaps269975;Parent=Thaps269975;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 124315 124611 . + 0 ID=Thaps269975;Parent=Thaps269975;rank=1 chr19a_19 . exon 124315 124611 . + . ID=Thaps269975.1;Parent=Thaps269975;constitutive=1;rank=1 chr19a_19 . CDS 124729 125709 . + 0 ID=Thaps269975;Parent=Thaps269975;rank=2 chr19a_19 . exon 124729 125709 . + . ID=Thaps269975.2;Parent=Thaps269975;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 126208 127429 . + . ID=Thaps38225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD20];external_name=Thaps38225;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 126208 127429 . + . ID=Thaps38225;Parent=Thaps38225;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 126208 126318 . + 0 ID=Thaps38225;Parent=Thaps38225;rank=1 chr19a_19 . exon 126208 126318 . + . ID=Thaps38225.1;Parent=Thaps38225;constitutive=1;rank=1 chr19a_19 . CDS 126692 127429 . + 0 ID=Thaps38225;Parent=Thaps38225;rank=2 chr19a_19 . exon 126692 127429 . + . ID=Thaps38225.2;Parent=Thaps38225;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 129900 131642 . + . ID=Thaps11098;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD22];external_name=Thaps11098;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 129900 131642 . + . ID=Thaps11098;Parent=Thaps11098;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 129900 131642 . + 0 ID=Thaps11098;Parent=Thaps11098;rank=1 chr19a_19 . exon 129900 131642 . + . ID=Thaps11098.1;Parent=Thaps11098;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 134113 136231 . + . ID=Thaps11100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD24];external_name=Thaps11100;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 134113 136231 . + . ID=Thaps11100;Parent=Thaps11100;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 134113 134236 . + 0 ID=Thaps11100;Parent=Thaps11100;rank=1 chr19a_19 . exon 134113 134236 . + . ID=Thaps11100.1;Parent=Thaps11100;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 134439 134714 . + 0 ID=Thaps11100;Parent=Thaps11100;rank=2 chr19a_19 . exon 134439 134714 . + . ID=Thaps11100.2;Parent=Thaps11100;constitutive=1;rank=2 chr19a_19 . CDS 134832 136231 . + 0 ID=Thaps11100;Parent=Thaps11100;rank=3 chr19a_19 . exon 134832 136231 . + . ID=Thaps11100.3;Parent=Thaps11100;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 137031 138599 . - . ID=Thaps11101;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD25];external_name=Thaps11101;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 137031 138599 . - . ID=Thaps11101;Parent=Thaps11101;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 137031 138599 . - 0 ID=Thaps11101;Parent=Thaps11101;rank=1 chr19a_19 . exon 137031 138599 . - . ID=Thaps11101.1;Parent=Thaps11101;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 131820 133274 . - . ID=Thaps15822;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD23];external_name=Thaps15822;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 131820 133274 . - . ID=Thaps15822;Parent=Thaps15822;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 131820 132332 . - 0 ID=Thaps15822;Parent=Thaps15822;rank=4 chr19a_19 . exon 131820 132332 . - . ID=Thaps15822.4;Parent=Thaps15822;constitutive=1;rank=4 chr19a_19 . CDS 132417 132595 . - 0 ID=Thaps15822;Parent=Thaps15822;rank=3 chr19a_19 . exon 132417 132595 . - . ID=Thaps15822.3;Parent=Thaps15822;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 132971 133071 . - 0 ID=Thaps15822;Parent=Thaps15822;rank=2 chr19a_19 . exon 132971 133071 . - . ID=Thaps15822.2;Parent=Thaps15822;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 133153 133274 . - 0 ID=Thaps15822;Parent=Thaps15822;rank=1 chr19a_19 . exon 133153 133274 . - . ID=Thaps15822.1;Parent=Thaps15822;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . repeat_region 144292 144347 . ? . description=trf chr19a_19 ensembl protein_coding_gene 140641 142472 . + . ID=Thaps11102;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD26];external_name=Thaps11102;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 140641 142472 . + . ID=Thaps11102;Parent=Thaps11102;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 140641 140939 . + 0 ID=Thaps11102;Parent=Thaps11102;rank=1 chr19a_19 . exon 140641 140939 . + . ID=Thaps11102.1;Parent=Thaps11102;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 141000 142217 . + 0 ID=Thaps11102;Parent=Thaps11102;rank=2 chr19a_19 . exon 141000 142217 . + . ID=Thaps11102.2;Parent=Thaps11102;constitutive=1;rank=2 chr19a_19 . CDS 142439 142472 . + 0 ID=Thaps11102;Parent=Thaps11102;rank=3 chr19a_19 . exon 142439 142472 . + . ID=Thaps11102.3;Parent=Thaps11102;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 ensembl protein_coding_gene 142659 144081 . - . ID=Thaps11103;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD27];external_name=Thaps11103;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 142659 144081 . - . ID=Thaps11103;Parent=Thaps11103;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 142659 142706 . - 0 ID=Thaps11103;Parent=Thaps11103;rank=4 chr19a_19 . exon 142659 142706 . - . ID=Thaps11103.4;Parent=Thaps11103;constitutive=1;rank=4 chr19a_19 . CDS 142801 143120 . - 0 ID=Thaps11103;Parent=Thaps11103;rank=3 chr19a_19 . exon 142801 143120 . - . ID=Thaps11103.3;Parent=Thaps11103;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 143249 143937 . - 0 ID=Thaps11103;Parent=Thaps11103;rank=2 chr19a_19 . exon 143249 143937 . - . ID=Thaps11103.2;Parent=Thaps11103;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 144044 144081 . - 0 ID=Thaps11103;Parent=Thaps11103;rank=1 chr19a_19 . exon 144044 144081 . - . ID=Thaps11103.1;Parent=Thaps11103;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 144979 148584 . - . ID=Thaps11104;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD28];external_name=Thaps11104;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 144979 148584 . - . ID=Thaps11104;Parent=Thaps11104;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 144979 148584 . - 0 ID=Thaps11104;Parent=Thaps11104;rank=1 chr19a_19 . exon 144979 148584 . - . ID=Thaps11104.1;Parent=Thaps11104;constitutive=1;rank=1 chr19a_19 . repeat_region 151582 151603 . ? . description=dust chr19a_19 ensembl protein_coding_gene 151024 154380 . + . ID=Thaps11106;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD30];external_name=Thaps11106;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 151024 154380 . + . ID=Thaps11106;Parent=Thaps11106;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 151024 154380 . + 0 ID=Thaps11106;Parent=Thaps11106;rank=1 chr19a_19 . exon 151024 154380 . + . ID=Thaps11106.1;Parent=Thaps11106;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 159197 162424 . + . ID=Thaps11109;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD33];external_name=Thaps11109;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 159197 162424 . + . ID=Thaps11109;Parent=Thaps11109;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 159197 159231 . + 0 ID=Thaps11109;Parent=Thaps11109;rank=1 chr19a_19 . exon 159197 159231 . + . ID=Thaps11109.1;Parent=Thaps11109;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 159254 159939 . + 0 ID=Thaps11109;Parent=Thaps11109;rank=2 chr19a_19 . exon 159254 159939 . + . ID=Thaps11109.2;Parent=Thaps11109;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 160083 161874 . + 0 ID=Thaps11109;Parent=Thaps11109;rank=3 chr19a_19 . CDS 161979 162097 . + 0 ID=Thaps11109;Parent=Thaps11109;rank=4 chr19a_19 . CDS 162174 162424 . + 0 ID=Thaps11109;Parent=Thaps11109;rank=5 chr19a_19 ensembl protein_coding_gene 150034 150611 . - . ID=Thaps264575;biotype=protein_coding;description=Putative uncharacterized protein HSF44 [Source:UniProtKB/TrEMBL%3BAcc:B8LD29];external_name=HSF44;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 150034 150611 . - . ID=Thaps264575;Parent=Thaps264575;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 150034 150611 . - 0 ID=Thaps264575;Parent=Thaps264575;rank=1 chr19a_19 . exon 150034 150611 . - . ID=Thaps264575.1;Parent=Thaps264575;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 154661 155050 . - . ID=Thaps38221;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD31];external_name=Thaps38221;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 154661 155050 . - . ID=Thaps38221;Parent=Thaps38221;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 154661 155050 . - 0 ID=Thaps38221;Parent=Thaps38221;rank=1 chr19a_19 . exon 154661 155050 . - . ID=Thaps38221.1;Parent=Thaps38221;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 157140 158475 . - . ID=Thaps814;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD32];external_name=Thaps814;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 157140 158475 . - . ID=Thaps814;Parent=Thaps814;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 157140 157295 . - 0 ID=Thaps814;Parent=Thaps814;rank=4 chr19a_19 . exon 157140 157295 . - . ID=Thaps814.4;Parent=Thaps814;constitutive=1;rank=4 chr19a_19 . CDS 157405 157514 . - 0 ID=Thaps814;Parent=Thaps814;rank=3 chr19a_19 . exon 157405 157514 . - . ID=Thaps814.3;Parent=Thaps814;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 157617 158148 . - 0 ID=Thaps814;Parent=Thaps814;rank=2 chr19a_19 . exon 157617 158148 . - . ID=Thaps814.2;Parent=Thaps814;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 158347 158475 . - 0 ID=Thaps814;Parent=Thaps814;rank=1 chr19a_19 . exon 158347 158475 . - . ID=Thaps814.1;Parent=Thaps814;constitutive=1;rank=1 chr19a_19 . biological_region 159444 159445 0.999 + . logic_name=eponine chr19a_19 . repeat_region 164395 164443 . ? . description=trf chr19a_19 . exon 160083 161874 . + . ID=Thaps11109.3;Parent=Thaps11109;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . exon 161979 162097 . + . ID=Thaps11109.4;Parent=Thaps11109;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . exon 162174 162424 . + . ID=Thaps11109.5;Parent=Thaps11109;constitutive=1;ensembl_end_phase=2;rank=5 chr19a_19 ensembl protein_coding_gene 166350 167033 . - . ID=Thaps264576;biotype=protein_coding;description=Family 19 glycoside hydrolase domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD34];external_name=Thaps264576;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 166350 167033 . - . ID=Thaps264576;Parent=Thaps264576;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 166350 166661 . - 0 ID=Thaps264576;Parent=Thaps264576;rank=2 chr19a_19 . exon 166350 166661 . - . ID=Thaps264576.2;Parent=Thaps264576;constitutive=1;rank=2 chr19a_19 . CDS 166812 167033 . - 0 ID=Thaps264576;Parent=Thaps264576;rank=1 chr19a_19 . exon 166812 167033 . - . ID=Thaps264576.1;Parent=Thaps264576;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 167867 169017 . - . ID=Thaps264577;biotype=protein_coding;description=Family 19 glycoside hydrolase domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD35];external_name=Thaps264577;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 167867 169017 . - . ID=Thaps264577;Parent=Thaps264577;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 167867 168044 . - 0 ID=Thaps264577;Parent=Thaps264577;rank=5 chr19a_19 . exon 167867 168044 . - . ID=Thaps264577.5;Parent=Thaps264577;constitutive=1;ensembl_end_phase=1;rank=5 chr19a_19 . CDS 168162 168282 . - 0 ID=Thaps264577;Parent=Thaps264577;rank=4 chr19a_19 . exon 168162 168282 . - . ID=Thaps264577.4;Parent=Thaps264577;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 168394 168429 . - 0 ID=Thaps264577;Parent=Thaps264577;rank=3 chr19a_19 . exon 168394 168429 . - . ID=Thaps264577.3;Parent=Thaps264577;constitutive=1;rank=3 chr19a_19 . CDS 168623 168685 . - 0 ID=Thaps264577;Parent=Thaps264577;rank=2 chr19a_19 . exon 168623 168685 . - . ID=Thaps264577.2;Parent=Thaps264577;constitutive=1;rank=2 chr19a_19 . CDS 168797 169017 . - 0 ID=Thaps264577;Parent=Thaps264577;rank=1 chr19a_19 . exon 168797 169017 . - . ID=Thaps264577.1;Parent=Thaps264577;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . repeat_region 169260 169314 . ? . description=dust chr19a_19 . repeat_region 178900 178924 . ? . description=dust chr19a_19 ensembl protein_coding_gene 171855 179286 . - . ID=Thaps11111;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD36];external_name=Thaps11111;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 171855 179286 . - . ID=Thaps11111;Parent=Thaps11111;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 171855 172555 . - 0 ID=Thaps11111;Parent=Thaps11111;rank=7 chr19a_19 . exon 171855 172555 . - . ID=Thaps11111.7;Parent=Thaps11111;constitutive=1;ensembl_end_phase=2;rank=7 chr19a_19 . CDS 172637 173730 . - 0 ID=Thaps11111;Parent=Thaps11111;rank=6 chr19a_19 . exon 172637 173730 . - . ID=Thaps11111.6;Parent=Thaps11111;constitutive=1;ensembl_end_phase=2;rank=6 chr19a_19 . CDS 173809 175016 . - 0 ID=Thaps11111;Parent=Thaps11111;rank=5 chr19a_19 . exon 173809 175016 . - . ID=Thaps11111.5;Parent=Thaps11111;constitutive=1;ensembl_end_phase=2;rank=5 chr19a_19 . CDS 175205 175504 . - 0 ID=Thaps11111;Parent=Thaps11111;rank=4 chr19a_19 . exon 175205 175504 . - . ID=Thaps11111.4;Parent=Thaps11111;constitutive=1;rank=4 chr19a_19 . CDS 175584 175991 . - 0 ID=Thaps11111;Parent=Thaps11111;rank=3 chr19a_19 . exon 175584 175991 . - . ID=Thaps11111.3;Parent=Thaps11111;constitutive=1;rank=3 chr19a_19 . CDS 176073 177281 . - 0 ID=Thaps11111;Parent=Thaps11111;rank=2 chr19a_19 . exon 176073 177281 . - . ID=Thaps11111.2;Parent=Thaps11111;constitutive=1;rank=2 chr19a_19 . CDS 177574 179286 . - 0 ID=Thaps11111;Parent=Thaps11111;rank=1 chr19a_19 . exon 177574 179286 . - . ID=Thaps11111.1;Parent=Thaps11111;constitutive=1;rank=1 chr19a_19 . repeat_region 183460 183500 . ? . description=trf chr19a_19 ensembl protein_coding_gene 179473 180528 . + . ID=Thaps11112;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD37];external_name=Thaps11112;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 179473 180528 . + . ID=Thaps11112;Parent=Thaps11112;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 179473 180528 . + 0 ID=Thaps11112;Parent=Thaps11112;rank=1 chr19a_19 . exon 179473 180528 . + . ID=Thaps11112.1;Parent=Thaps11112;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 182924 183818 . - . ID=Thaps11114;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD39];external_name=Thaps11114;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 182924 183818 . - . ID=Thaps11114;Parent=Thaps11114;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 182924 183397 . - 0 ID=Thaps11114;Parent=Thaps11114;rank=2 chr19a_19 . exon 182924 183397 . - . ID=Thaps11114.2;Parent=Thaps11114;constitutive=1;rank=2 chr19a_19 . CDS 183681 183818 . - 0 ID=Thaps11114;Parent=Thaps11114;rank=1 chr19a_19 . exon 183681 183818 . - . ID=Thaps11114.1;Parent=Thaps11114;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 184506 185114 . + . ID=Thaps11115;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD40];external_name=Thaps11115;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 184506 185114 . + . ID=Thaps11115;Parent=Thaps11115;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 184506 185114 . + 0 ID=Thaps11115;Parent=Thaps11115;rank=1 chr19a_19 . exon 184506 185114 . + . ID=Thaps11115.1;Parent=Thaps11115;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 186430 187128 . + . ID=Thaps11117;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD42];external_name=Thaps11117;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 186430 187128 . + . ID=Thaps11117;Parent=Thaps11117;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 186430 187128 . + 0 ID=Thaps11117;Parent=Thaps11117;rank=1 chr19a_19 . exon 186430 187128 . + . ID=Thaps11117.1;Parent=Thaps11117;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 187479 188414 . - . ID=Thaps11118;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD43];external_name=Thaps11118;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 187479 188414 . - . ID=Thaps11118;Parent=Thaps11118;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 187479 188414 . - 0 ID=Thaps11118;Parent=Thaps11118;rank=1 chr19a_19 . exon 187479 188414 . - . ID=Thaps11118.1;Parent=Thaps11118;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 188738 190752 . + . ID=Thaps25462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD44];external_name=Thaps25462;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 188738 190752 . + . ID=Thaps25462;Parent=Thaps25462;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 188738 189073 . + 0 ID=Thaps25462;Parent=Thaps25462;rank=1 chr19a_19 . exon 188738 189073 . + . ID=Thaps25462.1;Parent=Thaps25462;constitutive=1;rank=1 chr19a_19 . CDS 189178 190752 . + 0 ID=Thaps25462;Parent=Thaps25462;rank=2 chr19a_19 ensembl protein_coding_gene 185373 185918 . - . ID=Thaps38231;biotype=protein_coding;description=Cytochrome b6-f complex iron-sulfur subunit [Source:UniProtKB/TrEMBL%3BAcc:B8LD41];external_name=PETC2;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 185373 185918 . - . ID=Thaps38231;Parent=Thaps38231;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 185373 185918 . - 0 ID=Thaps38231;Parent=Thaps38231;rank=1 chr19a_19 . exon 185373 185918 . - . ID=Thaps38231.1;Parent=Thaps38231;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 181309 182809 . - . ID=Thaps42821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD38];external_name=Thaps42821;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 181309 182809 . - . ID=Thaps42821;Parent=Thaps42821;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 181309 182455 . - 0 ID=Thaps42821;Parent=Thaps42821;rank=3 chr19a_19 . exon 181309 182455 . - . ID=Thaps42821.3;Parent=Thaps42821;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 182556 182621 . - 0 ID=Thaps42821;Parent=Thaps42821;rank=2 chr19a_19 . exon 182556 182621 . - . ID=Thaps42821.2;Parent=Thaps42821;constitutive=1;rank=2 chr19a_19 . CDS 182724 182809 . - 0 ID=Thaps42821;Parent=Thaps42821;rank=1 chr19a_19 . exon 182724 182809 . - . ID=Thaps42821.1;Parent=Thaps42821;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . repeat_region 195107 195164 . ? . description=dust chr19a_19 . exon 189178 190752 . + . ID=Thaps25462.2;Parent=Thaps25462;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 198923 199693 . - . ID=Thaps25463;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD46];external_name=Thaps25463;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 198923 199693 . - . ID=Thaps25463;Parent=Thaps25463;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 198923 199693 . - 0 ID=Thaps25463;Parent=Thaps25463;rank=1 chr19a_19 . exon 198923 199693 . - . ID=Thaps25463.1;Parent=Thaps25463;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 194904 195674 . - . ID=Thaps269976;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD45];external_name=Thaps269976;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 194904 195674 . - . ID=Thaps269976;Parent=Thaps269976;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 194904 195100 . - 0 ID=Thaps269976;Parent=Thaps269976;rank=2 chr19a_19 . exon 194904 195100 . - . ID=Thaps269976.2;Parent=Thaps269976;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 195254 195674 . - 0 ID=Thaps269976;Parent=Thaps269976;rank=1 chr19a_19 . exon 195254 195674 . - . ID=Thaps269976.1;Parent=Thaps269976;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . repeat_region 199788 199809 . ? . description=trf chr19a_19 . repeat_region 201058 201077 . ? . description=trf chr19a_19 . repeat_region 202516 202608 . ? . description=trf chr19a_19 . repeat_region 205980 206030 . ? . description=trf chr19a_19 ensembl protein_coding_gene 200462 204420 . + . ID=Thaps25464;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD47];external_name=Thaps25464;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 200462 204420 . + . ID=Thaps25464;Parent=Thaps25464;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 200462 201154 . + 0 ID=Thaps25464;Parent=Thaps25464;rank=1 chr19a_19 . exon 200462 201154 . + . ID=Thaps25464.1;Parent=Thaps25464;constitutive=1;rank=1 chr19a_19 . CDS 201284 201798 . + 0 ID=Thaps25464;Parent=Thaps25464;rank=2 chr19a_19 . exon 201284 201798 . + . ID=Thaps25464.2;Parent=Thaps25464;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 201903 204420 . + 0 ID=Thaps25464;Parent=Thaps25464;rank=3 chr19a_19 . exon 201903 204420 . + . ID=Thaps25464.3;Parent=Thaps25464;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 ensembl protein_coding_gene 205743 206605 . - . ID=Thaps25465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD48];external_name=Thaps25465;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 205743 206605 . - . ID=Thaps25465;Parent=Thaps25465;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 205743 206389 . - 0 ID=Thaps25465;Parent=Thaps25465;rank=2 chr19a_19 . exon 205743 206389 . - . ID=Thaps25465.2;Parent=Thaps25465;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 206581 206605 . - 0 ID=Thaps25465;Parent=Thaps25465;rank=1 chr19a_19 . exon 206581 206605 . - . ID=Thaps25465.1;Parent=Thaps25465;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 206902 209453 . + . ID=Thaps25466;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD49];external_name=Thaps25466;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 206902 209453 . + . ID=Thaps25466;Parent=Thaps25466;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 206902 207443 . + 0 ID=Thaps25466;Parent=Thaps25466;rank=1 chr19a_19 . exon 206902 207443 . + . ID=Thaps25466.1;Parent=Thaps25466;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 207489 209036 . + 0 ID=Thaps25466;Parent=Thaps25466;rank=2 chr19a_19 . exon 207489 209036 . + . ID=Thaps25466.2;Parent=Thaps25466;constitutive=1;rank=2 chr19a_19 . CDS 209123 209453 . + 0 ID=Thaps25466;Parent=Thaps25466;rank=3 chr19a_19 . repeat_region 215790 215821 . ? . description=dust chr19a_19 ensembl protein_coding_gene 215204 215719 . - . ID=Thaps11127;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD53];external_name=Thaps11127;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 215204 215719 . - . ID=Thaps11127;Parent=Thaps11127;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 215204 215719 . - 0 ID=Thaps11127;Parent=Thaps11127;rank=1 chr19a_19 . exon 215204 215719 . - . ID=Thaps11127.1;Parent=Thaps11127;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 218052 221130 . - . ID=Thaps11129;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD55];external_name=Thaps11129;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 218052 221130 . - . ID=Thaps11129;Parent=Thaps11129;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 218052 218589 . - 0 ID=Thaps11129;Parent=Thaps11129;rank=2 chr19a_19 . exon 218052 218589 . - . ID=Thaps11129.2;Parent=Thaps11129;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 218639 221130 . - 0 ID=Thaps11129;Parent=Thaps11129;rank=1 chr19a_19 . exon 218639 221130 . - . ID=Thaps11129.1;Parent=Thaps11129;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . exon 209123 209453 . + . ID=Thaps25466.3;Parent=Thaps25466;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 ensembl protein_coding_gene 210121 210699 . - . ID=Thaps25467;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD50];external_name=Thaps25467;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 210121 210699 . - . ID=Thaps25467;Parent=Thaps25467;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 210121 210428 . - 0 ID=Thaps25467;Parent=Thaps25467;rank=2 chr19a_19 . exon 210121 210428 . - . ID=Thaps25467.2;Parent=Thaps25467;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 210525 210699 . - 0 ID=Thaps25467;Parent=Thaps25467;rank=1 chr19a_19 . exon 210525 210699 . - . ID=Thaps25467.1;Parent=Thaps25467;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 216159 217629 . + . ID=Thaps25468;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD54];external_name=Thaps25468;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 216159 217629 . + . ID=Thaps25468;Parent=Thaps25468;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 216159 216539 . + 0 ID=Thaps25468;Parent=Thaps25468;rank=1 chr19a_19 . exon 216159 216539 . + . ID=Thaps25468.1;Parent=Thaps25468;constitutive=1;rank=1 chr19a_19 . CDS 216621 216696 . + 0 ID=Thaps25468;Parent=Thaps25468;rank=2 chr19a_19 . exon 216621 216696 . + . ID=Thaps25468.2;Parent=Thaps25468;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 216817 216907 . + 0 ID=Thaps25468;Parent=Thaps25468;rank=3 chr19a_19 . exon 216817 216907 . + . ID=Thaps25468.3;Parent=Thaps25468;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 217038 217470 . + 0 ID=Thaps25468;Parent=Thaps25468;rank=4 chr19a_19 . exon 217038 217470 . + . ID=Thaps25468.4;Parent=Thaps25468;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 217546 217629 . + 0 ID=Thaps25468;Parent=Thaps25468;rank=5 chr19a_19 . exon 217546 217629 . + . ID=Thaps25468.5;Parent=Thaps25468;constitutive=1;rank=5 chr19a_19 ensembl protein_coding_gene 211536 212480 . - . ID=Thaps264582;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD51];external_name=Thaps264582;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 211536 212480 . - . ID=Thaps264582;Parent=Thaps264582;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 211536 211663 . - 0 ID=Thaps264582;Parent=Thaps264582;rank=5 chr19a_19 . exon 211536 211663 . - . ID=Thaps264582.5;Parent=Thaps264582;constitutive=1;ensembl_end_phase=2;rank=5 chr19a_19 . CDS 211749 211847 . - 0 ID=Thaps264582;Parent=Thaps264582;rank=4 chr19a_19 . exon 211749 211847 . - . ID=Thaps264582.4;Parent=Thaps264582;constitutive=1;rank=4 chr19a_19 . CDS 211932 211990 . - 0 ID=Thaps264582;Parent=Thaps264582;rank=3 chr19a_19 . exon 211932 211990 . - . ID=Thaps264582.3;Parent=Thaps264582;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 212145 212196 . - 0 ID=Thaps264582;Parent=Thaps264582;rank=2 chr19a_19 . exon 212145 212196 . - . ID=Thaps264582.2;Parent=Thaps264582;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 212263 212480 . - 0 ID=Thaps264582;Parent=Thaps264582;rank=1 chr19a_19 . exon 212263 212480 . - . ID=Thaps264582.1;Parent=Thaps264582;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 213329 214834 . + . ID=Thaps264583;biotype=protein_coding;description=Pyruvate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8LD52];external_name=PYK4;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 213329 214834 . + . ID=Thaps264583;Parent=Thaps264583;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 213329 213471 . + 0 ID=Thaps264583;Parent=Thaps264583;rank=1 chr19a_19 . exon 213329 213471 . + . ID=Thaps264583.1;Parent=Thaps264583;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 213538 213596 . + 0 ID=Thaps264583;Parent=Thaps264583;rank=2 chr19a_19 . exon 213538 213596 . + . ID=Thaps264583.2;Parent=Thaps264583;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 213706 214136 . + 0 ID=Thaps264583;Parent=Thaps264583;rank=3 chr19a_19 . exon 213706 214136 . + . ID=Thaps264583.3;Parent=Thaps264583;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 214170 214636 . + 0 ID=Thaps264583;Parent=Thaps264583;rank=4 chr19a_19 . exon 214170 214636 . + . ID=Thaps264583.4;Parent=Thaps264583;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 214670 214834 . + 0 ID=Thaps264583;Parent=Thaps264583;rank=5 chr19a_19 . exon 214670 214834 . + . ID=Thaps264583.5;Parent=Thaps264583;constitutive=1;rank=5 chr19a_19 ensembl protein_coding_gene 221367 224279 . + . ID=Thaps11130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD56];external_name=Thaps11130;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 221367 224279 . + . ID=Thaps11130;Parent=Thaps11130;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 221367 224279 . + 0 ID=Thaps11130;Parent=Thaps11130;rank=1 chr19a_19 . exon 221367 224279 . + . ID=Thaps11130.1;Parent=Thaps11130;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 224915 226219 . - . ID=Thaps14971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD57];external_name=Thaps14971;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 224915 226219 . - . ID=Thaps14971;Parent=Thaps14971;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 224915 225449 . - 0 ID=Thaps14971;Parent=Thaps14971;rank=4 chr19a_19 . exon 224915 225449 . - . ID=Thaps14971.4;Parent=Thaps14971;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 225501 225614 . - 0 ID=Thaps14971;Parent=Thaps14971;rank=3 chr19a_19 . exon 225501 225614 . - . ID=Thaps14971.3;Parent=Thaps14971;constitutive=1;rank=3 chr19a_19 . CDS 225837 226099 . - 0 ID=Thaps14971;Parent=Thaps14971;rank=2 chr19a_19 . exon 225837 226099 . - . ID=Thaps14971.2;Parent=Thaps14971;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 226154 226219 . - 0 ID=Thaps14971;Parent=Thaps14971;rank=1 chr19a_19 . exon 226154 226219 . - . ID=Thaps14971.1;Parent=Thaps14971;constitutive=1;rank=1 chr19a_19 . repeat_region 233791 233800 . ? . description=dust chr19a_19 . repeat_region 236576 236633 . ? . description=trf chr19a_19 ensembl protein_coding_gene 233298 233819 . + . ID=Thaps11133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD58];external_name=Thaps11133;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 233298 233819 . + . ID=Thaps11133;Parent=Thaps11133;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 233298 233819 . + 0 ID=Thaps11133;Parent=Thaps11133;rank=1 chr19a_19 . exon 233298 233819 . + . ID=Thaps11133.1;Parent=Thaps11133;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 237403 241258 . + . ID=Thaps11135;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD60];external_name=Thaps11135;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 237403 241258 . + . ID=Thaps11135;Parent=Thaps11135;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 237403 239525 . + 0 ID=Thaps11135;Parent=Thaps11135;rank=1 chr19a_19 . exon 237403 239525 . + . ID=Thaps11135.1;Parent=Thaps11135;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 239603 240320 . + 0 ID=Thaps11135;Parent=Thaps11135;rank=2 chr19a_19 . CDS 240394 240444 . + 0 ID=Thaps11135;Parent=Thaps11135;rank=3 chr19a_19 . CDS 240519 240919 . + 0 ID=Thaps11135;Parent=Thaps11135;rank=4 chr19a_19 . CDS 240971 241063 . + 0 ID=Thaps11135;Parent=Thaps11135;rank=5 chr19a_19 . CDS 241138 241258 . + 0 ID=Thaps11135;Parent=Thaps11135;rank=6 chr19a_19 ensembl protein_coding_gene 234709 236199 . + . ID=Thaps38294;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD59];external_name=Thaps38294;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 234709 236199 . + . ID=Thaps38294;Parent=Thaps38294;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 234709 234940 . + 0 ID=Thaps38294;Parent=Thaps38294;rank=1 chr19a_19 . exon 234709 234940 . + . ID=Thaps38294.1;Parent=Thaps38294;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 235145 235353 . + 0 ID=Thaps38294;Parent=Thaps38294;rank=2 chr19a_19 . exon 235145 235353 . + . ID=Thaps38294.2;Parent=Thaps38294;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 235459 235866 . + 0 ID=Thaps38294;Parent=Thaps38294;rank=3 chr19a_19 . exon 235459 235866 . + . ID=Thaps38294.3;Parent=Thaps38294;constitutive=1;rank=3 chr19a_19 . CDS 235996 236199 . + 0 ID=Thaps38294;Parent=Thaps38294;rank=4 chr19a_19 . exon 235996 236199 . + . ID=Thaps38294.4;Parent=Thaps38294;constitutive=1;rank=4 chr19a_19 . biological_region 243578 243582 0.999 + . logic_name=eponine chr19a_19 . biological_region 244939 244941 0.999 + . logic_name=eponine chr19a_19 . exon 239603 240320 . + . ID=Thaps11135.2;Parent=Thaps11135;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . exon 240394 240444 . + . ID=Thaps11135.3;Parent=Thaps11135;constitutive=1;rank=3 chr19a_19 . exon 240519 240919 . + . ID=Thaps11135.4;Parent=Thaps11135;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . exon 240971 241063 . + . ID=Thaps11135.5;Parent=Thaps11135;constitutive=1;rank=5 chr19a_19 . exon 241138 241258 . + . ID=Thaps11135.6;Parent=Thaps11135;constitutive=1;ensembl_end_phase=1;rank=6 chr19a_19 ensembl protein_coding_gene 247028 248476 . + . ID=Thaps11138;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD63];external_name=Thaps11138;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 247028 248476 . + . ID=Thaps11138;Parent=Thaps11138;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 247028 248476 . + 0 ID=Thaps11138;Parent=Thaps11138;rank=1 chr19a_19 . exon 247028 248476 . + . ID=Thaps11138.1;Parent=Thaps11138;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 248756 249412 . - . ID=Thaps11139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD64];external_name=Thaps11139;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 248756 249412 . - . ID=Thaps11139;Parent=Thaps11139;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 248756 249412 . - 0 ID=Thaps11139;Parent=Thaps11139;rank=1 chr19a_19 . exon 248756 249412 . - . ID=Thaps11139.1;Parent=Thaps11139;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 241589 243068 . - . ID=Thaps14555;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD61];external_name=Thaps14555;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 241589 243068 . - . ID=Thaps14555;Parent=Thaps14555;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 241589 241791 . - 0 ID=Thaps14555;Parent=Thaps14555;rank=3 chr19a_19 . exon 241589 241791 . - . ID=Thaps14555.3;Parent=Thaps14555;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 241855 242182 . - 0 ID=Thaps14555;Parent=Thaps14555;rank=2 chr19a_19 . exon 241855 242182 . - . ID=Thaps14555.2;Parent=Thaps14555;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 242265 243068 . - 0 ID=Thaps14555;Parent=Thaps14555;rank=1 chr19a_19 . exon 242265 243068 . - . ID=Thaps14555.1;Parent=Thaps14555;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 245080 246009 . + . ID=Thaps264587;biotype=protein_coding;description=Putative uncharacterized protein bZIP2 [Source:UniProtKB/TrEMBL%3BAcc:B8LD62];external_name=BZIP2;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 245080 246009 . + . ID=Thaps264587;Parent=Thaps264587;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 245080 245297 . + 0 ID=Thaps264587;Parent=Thaps264587;rank=1 chr19a_19 . exon 245080 245297 . + . ID=Thaps264587.1;Parent=Thaps264587;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 245322 246009 . + 0 ID=Thaps264587;Parent=Thaps264587;rank=2 chr19a_19 . exon 245322 246009 . + . ID=Thaps264587.2;Parent=Thaps264587;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . repeat_region 256057 256080 . ? . description=trf chr19a_19 . repeat_region 256057 256080 . ? . description=dust chr19a_19 . repeat_region 257725 257732 . ? . description=dust chr19a_19 ensembl protein_coding_gene 251774 255781 . - . ID=Thaps25470;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD65];external_name=Thaps25470;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 251774 255781 . - . ID=Thaps25470;Parent=Thaps25470;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 251774 251828 . - 0 ID=Thaps25470;Parent=Thaps25470;rank=4 chr19a_19 . exon 251774 251828 . - . ID=Thaps25470.4;Parent=Thaps25470;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 252074 252241 . - 0 ID=Thaps25470;Parent=Thaps25470;rank=3 chr19a_19 . exon 252074 252241 . - . ID=Thaps25470.3;Parent=Thaps25470;constitutive=1;rank=3 chr19a_19 . CDS 252428 253968 . - 0 ID=Thaps25470;Parent=Thaps25470;rank=2 chr19a_19 . exon 252428 253968 . - . ID=Thaps25470.2;Parent=Thaps25470;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 254042 255781 . - 0 ID=Thaps25470;Parent=Thaps25470;rank=1 chr19a_19 . exon 254042 255781 . - . ID=Thaps25470.1;Parent=Thaps25470;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 256329 259448 . + . ID=Thaps38248;biotype=protein_coding;description=Alanine-trna ligase [Source:UniProtKB/TrEMBL%3BAcc:B8LD66];external_name=ALATS1;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 256329 259448 . + . ID=Thaps38248;Parent=Thaps38248;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 256329 256850 . + 0 ID=Thaps38248;Parent=Thaps38248;rank=1 chr19a_19 . exon 256329 256850 . + . ID=Thaps38248.1;Parent=Thaps38248;constitutive=1;rank=1 chr19a_19 . CDS 256955 257474 . + 0 ID=Thaps38248;Parent=Thaps38248;rank=2 chr19a_19 . exon 256955 257474 . + . ID=Thaps38248.2;Parent=Thaps38248;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 257579 258738 . + 0 ID=Thaps38248;Parent=Thaps38248;rank=3 chr19a_19 . exon 257579 258738 . + . ID=Thaps38248.3;Parent=Thaps38248;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 258849 259448 . + 0 ID=Thaps38248;Parent=Thaps38248;rank=4 chr19a_19 ensembl protein_coding_gene 260563 261741 . + . ID=Thaps11142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD67];external_name=Thaps11142;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 260563 261741 . + . ID=Thaps11142;Parent=Thaps11142;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 260563 260715 . + 0 ID=Thaps11142;Parent=Thaps11142;rank=1 chr19a_19 . exon 260563 260715 . + . ID=Thaps11142.1;Parent=Thaps11142;constitutive=1;rank=1 chr19a_19 . CDS 261130 261741 . + 0 ID=Thaps11142;Parent=Thaps11142;rank=2 chr19a_19 . exon 261130 261741 . + . ID=Thaps11142.2;Parent=Thaps11142;constitutive=1;rank=2 chr19a_19 . exon 258849 259448 . + . ID=Thaps38248.4;Parent=Thaps38248;constitutive=1;rank=4 chr19a_19 . repeat_region 272474 272543 . ? . description=trf chr19a_19 . repeat_region 276628 276635 . ? . description=dust chr19a_19 . repeat_region 277626 281072 . + . description=Harbinger2_TP chr19a_19 . repeat_region 277783 277851 . ? . description=trf chr19a_19 ensembl protein_coding_gene 270386 271033 . + . ID=Thaps11144;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD68];external_name=Thaps11144;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 270386 271033 . + . ID=Thaps11144;Parent=Thaps11144;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 270386 271033 . + 0 ID=Thaps11144;Parent=Thaps11144;rank=1 chr19a_19 . exon 270386 271033 . + . ID=Thaps11144.1;Parent=Thaps11144;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 272391 274754 . + . ID=Thaps11145;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD69];external_name=Thaps11145;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 272391 274754 . + . ID=Thaps11145;Parent=Thaps11145;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 272391 274754 . + 0 ID=Thaps11145;Parent=Thaps11145;rank=1 chr19a_19 . exon 272391 274754 . + . ID=Thaps11145.1;Parent=Thaps11145;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 275622 277451 . + . ID=Thaps11146;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD70];external_name=Thaps11146;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 275622 277451 . + . ID=Thaps11146;Parent=Thaps11146;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 275622 277451 . + 0 ID=Thaps11146;Parent=Thaps11146;rank=1 chr19a_19 . exon 275622 277451 . + . ID=Thaps11146.1;Parent=Thaps11146;constitutive=1;rank=1 chr19a_19 . repeat_region 281073 281161 . - . description=TE2_TP chr19a_19 ensembl protein_coding_gene 281286 283444 . + . ID=Thaps11147;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD71];external_name=Thaps11147;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 281286 283444 . + . ID=Thaps11147;Parent=Thaps11147;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 281286 281291 . + 0 ID=Thaps11147;Parent=Thaps11147;rank=1 chr19a_19 . exon 281286 281291 . + . ID=Thaps11147.1;Parent=Thaps11147;constitutive=1;rank=1 chr19a_19 . CDS 281454 281870 . + 0 ID=Thaps11147;Parent=Thaps11147;rank=2 chr19a_19 . exon 281454 281870 . + . ID=Thaps11147.2;Parent=Thaps11147;constitutive=1;rank=2 chr19a_19 . CDS 281945 282832 . + 0 ID=Thaps11147;Parent=Thaps11147;rank=3 chr19a_19 . exon 281945 282832 . + . ID=Thaps11147.3;Parent=Thaps11147;constitutive=1;rank=3 chr19a_19 . CDS 282915 283052 . + 0 ID=Thaps11147;Parent=Thaps11147;rank=4 chr19a_19 . exon 282915 283052 . + . ID=Thaps11147.4;Parent=Thaps11147;constitutive=1;rank=4 chr19a_19 . CDS 283130 283444 . + 0 ID=Thaps11147;Parent=Thaps11147;rank=5 chr19a_19 . exon 283130 283444 . + . ID=Thaps11147.5;Parent=Thaps11147;constitutive=1;rank=5 chr19a_19 ensembl protein_coding_gene 284469 287283 . + . ID=Thaps11148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD72];external_name=Thaps11148;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 284469 287283 . + . ID=Thaps11148;Parent=Thaps11148;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 284469 285601 . + 0 ID=Thaps11148;Parent=Thaps11148;rank=1 chr19a_19 . exon 284469 285601 . + . ID=Thaps11148.1;Parent=Thaps11148;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 285711 286279 . + 0 ID=Thaps11148;Parent=Thaps11148;rank=2 chr19a_19 . exon 285711 286279 . + . ID=Thaps11148.2;Parent=Thaps11148;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 286352 287140 . + 0 ID=Thaps11148;Parent=Thaps11148;rank=3 chr19a_19 . exon 286352 287140 . + . ID=Thaps11148.3;Parent=Thaps11148;constitutive=1;rank=3 chr19a_19 . CDS 287231 287283 . + 0 ID=Thaps11148;Parent=Thaps11148;rank=4 chr19a_19 . exon 287231 287283 . + . ID=Thaps11148.4;Parent=Thaps11148;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 ensembl protein_coding_gene 287969 294316 . + . ID=Thaps25472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD73];external_name=Thaps25472;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 287969 294316 . + . ID=Thaps25472;Parent=Thaps25472;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 287969 292774 . + 0 ID=Thaps25472;Parent=Thaps25472;rank=1 chr19a_19 . exon 287969 292774 . + . ID=Thaps25472.1;Parent=Thaps25472;constitutive=1;rank=1 chr19a_19 . CDS 293156 293296 . + 0 ID=Thaps25472;Parent=Thaps25472;rank=2 chr19a_19 . CDS 293512 293993 . + 0 ID=Thaps25472;Parent=Thaps25472;rank=3 chr19a_19 . CDS 294083 294147 . + 0 ID=Thaps25472;Parent=Thaps25472;rank=4 chr19a_19 . CDS 294291 294316 . + 0 ID=Thaps25472;Parent=Thaps25472;rank=5 chr19a_19 ensembl protein_coding_gene 295909 298185 . + . ID=Thaps11150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD74];external_name=Thaps11150;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 295909 298185 . + . ID=Thaps11150;Parent=Thaps11150;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 295909 298185 . + 0 ID=Thaps11150;Parent=Thaps11150;rank=1 chr19a_19 . exon 295909 298185 . + . ID=Thaps11150.1;Parent=Thaps11150;constitutive=1;rank=1 chr19a_19 . exon 293156 293296 . + . ID=Thaps25472.2;Parent=Thaps25472;constitutive=1;rank=2 chr19a_19 . exon 293512 293993 . + . ID=Thaps25472.3;Parent=Thaps25472;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . exon 294083 294147 . + . ID=Thaps25472.4;Parent=Thaps25472;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . exon 294291 294316 . + . ID=Thaps25472.5;Parent=Thaps25472;constitutive=1;ensembl_end_phase=2;rank=5 chr19a_19 ensembl protein_coding_gene 298492 300384 . - . ID=Thaps25473;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD75];external_name=Thaps25473;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 298492 300384 . - . ID=Thaps25473;Parent=Thaps25473;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 298492 298529 . - 0 ID=Thaps25473;Parent=Thaps25473;rank=4 chr19a_19 . exon 298492 298529 . - . ID=Thaps25473.4;Parent=Thaps25473;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 298611 299127 . - 0 ID=Thaps25473;Parent=Thaps25473;rank=3 chr19a_19 . exon 298611 299127 . - . ID=Thaps25473.3;Parent=Thaps25473;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 299225 299675 . - 0 ID=Thaps25473;Parent=Thaps25473;rank=2 chr19a_19 . CDS 299762 300384 . - 0 ID=Thaps25473;Parent=Thaps25473;rank=1 chr19a_19 ensembl protein_coding_gene 305242 307555 . - . ID=Thaps11154;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD78];external_name=Thaps11154;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 305242 307555 . - . ID=Thaps11154;Parent=Thaps11154;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 305242 305503 . - 0 ID=Thaps11154;Parent=Thaps11154;rank=2 chr19a_19 . exon 305242 305503 . - . ID=Thaps11154.2;Parent=Thaps11154;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 305580 307555 . - 0 ID=Thaps11154;Parent=Thaps11154;rank=1 chr19a_19 . exon 305580 307555 . - . ID=Thaps11154.1;Parent=Thaps11154;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 308387 310246 . - . ID=Thaps11155;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD79];external_name=Thaps11155;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 308387 310246 . - . ID=Thaps11155;Parent=Thaps11155;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 308387 308914 . - 0 ID=Thaps11155;Parent=Thaps11155;rank=5 chr19a_19 . exon 308387 308914 . - . ID=Thaps11155.5;Parent=Thaps11155;constitutive=1;rank=5 chr19a_19 . CDS 308984 309365 . - 0 ID=Thaps11155;Parent=Thaps11155;rank=4 chr19a_19 . CDS 309443 309531 . - 0 ID=Thaps11155;Parent=Thaps11155;rank=3 chr19a_19 . CDS 309804 309891 . - 0 ID=Thaps11155;Parent=Thaps11155;rank=2 chr19a_19 . CDS 309990 310246 . - 0 ID=Thaps11155;Parent=Thaps11155;rank=1 chr19a_19 . exon 299225 299675 . - . ID=Thaps25473.2;Parent=Thaps25473;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . exon 299762 300384 . - . ID=Thaps25473.1;Parent=Thaps25473;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 303536 304207 . + . ID=Thaps264590;biotype=protein_coding;description=Putative uncharacterized protein HSF21 [Source:UniProtKB/TrEMBL%3BAcc:B8LD77];external_name=HSF21;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 303536 304207 . + . ID=Thaps264590;Parent=Thaps264590;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 303536 303777 . + 0 ID=Thaps264590;Parent=Thaps264590;rank=1 chr19a_19 . exon 303536 303777 . + . ID=Thaps264590.1;Parent=Thaps264590;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 303894 303981 . + 0 ID=Thaps264590;Parent=Thaps264590;rank=2 chr19a_19 . exon 303894 303981 . + . ID=Thaps264590.2;Parent=Thaps264590;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 304081 304207 . + 0 ID=Thaps264590;Parent=Thaps264590;rank=3 chr19a_19 . exon 304081 304207 . + . ID=Thaps264590.3;Parent=Thaps264590;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 ensembl protein_coding_gene 300593 301492 . + . ID=Thaps30454;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD76];external_name=Thaps30454;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 300593 301492 . + . ID=Thaps30454;Parent=Thaps30454;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 300593 301492 . + 0 ID=Thaps30454;Parent=Thaps30454;rank=1 chr19a_19 . exon 300593 301492 . + . ID=Thaps30454.1;Parent=Thaps30454;constitutive=1;rank=1 chr19a_19 . repeat_region 308648 308669 . ? . description=trf chr19a_19 . repeat_region 308648 308669 . ? . description=dust chr19a_19 . repeat_region 310337 310345 . ? . description=dust chr19a_19 . repeat_region 317590 317613 . ? . description=trf chr19a_19 . repeat_region 317590 317613 . ? . description=dust chr19a_19 . repeat_region 317877 317928 . ? . description=trf chr19a_19 . repeat_region 318317 318341 . ? . description=trf chr19a_19 . exon 308984 309365 . - . ID=Thaps11155.4;Parent=Thaps11155;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . exon 309443 309531 . - . ID=Thaps11155.3;Parent=Thaps11155;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . exon 309804 309891 . - . ID=Thaps11155.2;Parent=Thaps11155;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . exon 309990 310246 . - . ID=Thaps11155.1;Parent=Thaps11155;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 310821 312339 . + . ID=Thaps11156;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD80];external_name=Thaps11156;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 310821 312339 . + . ID=Thaps11156;Parent=Thaps11156;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 310821 311062 . + 0 ID=Thaps11156;Parent=Thaps11156;rank=1 chr19a_19 . exon 310821 311062 . + . ID=Thaps11156.1;Parent=Thaps11156;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 311118 311266 . + 0 ID=Thaps11156;Parent=Thaps11156;rank=2 chr19a_19 . exon 311118 311266 . + . ID=Thaps11156.2;Parent=Thaps11156;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 311366 312339 . + 0 ID=Thaps11156;Parent=Thaps11156;rank=3 chr19a_19 . exon 311366 312339 . + . ID=Thaps11156.3;Parent=Thaps11156;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 316746 317831 . - . ID=Thaps25475;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD82];external_name=Thaps25475;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 316746 317831 . - . ID=Thaps25475;Parent=Thaps25475;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 316746 317536 . - 0 ID=Thaps25475;Parent=Thaps25475;rank=2 chr19a_19 . exon 316746 317536 . - . ID=Thaps25475.2;Parent=Thaps25475;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 317669 317831 . - 0 ID=Thaps25475;Parent=Thaps25475;rank=1 chr19a_19 . exon 317669 317831 . - . ID=Thaps25475.1;Parent=Thaps25475;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 318499 321750 . + . ID=Thaps25476;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD83];external_name=Thaps25476;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 318499 321750 . + . ID=Thaps25476;Parent=Thaps25476;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 318499 319963 . + 0 ID=Thaps25476;Parent=Thaps25476;rank=1 chr19a_19 . exon 318499 319963 . + . ID=Thaps25476.1;Parent=Thaps25476;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 320051 321750 . + 0 ID=Thaps25476;Parent=Thaps25476;rank=2 chr19a_19 ensembl protein_coding_gene 313563 315287 . - . ID=Thaps38289;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD81];external_name=Thaps38289;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 313563 315287 . - . ID=Thaps38289;Parent=Thaps38289;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 313563 315287 . - 0 ID=Thaps38289;Parent=Thaps38289;rank=1 chr19a_19 . exon 313563 315287 . - . ID=Thaps38289.1;Parent=Thaps38289;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 325700 326792 . - . ID=Thaps11162;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD86];external_name=Thaps11162;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 325700 326792 . - . ID=Thaps11162;Parent=Thaps11162;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 325700 325993 . - 0 ID=Thaps11162;Parent=Thaps11162;rank=2 chr19a_19 . exon 325700 325993 . - . ID=Thaps11162.2;Parent=Thaps11162;constitutive=1;rank=2 chr19a_19 . CDS 326082 326792 . - 0 ID=Thaps11162;Parent=Thaps11162;rank=1 chr19a_19 . exon 326082 326792 . - . ID=Thaps11162.1;Parent=Thaps11162;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 327110 327715 . - . ID=Thaps11163;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD87];external_name=Thaps11163;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 327110 327715 . - . ID=Thaps11163;Parent=Thaps11163;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 327110 327715 . - 0 ID=Thaps11163;Parent=Thaps11163;rank=1 chr19a_19 . exon 327110 327715 . - . ID=Thaps11163.1;Parent=Thaps11163;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 327918 329202 . - . ID=Thaps11164;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD88];external_name=Thaps11164;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 327918 329202 . - . ID=Thaps11164;Parent=Thaps11164;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 327918 328367 . - 0 ID=Thaps11164;Parent=Thaps11164;rank=2 chr19a_19 . exon 327918 328367 . - . ID=Thaps11164.2;Parent=Thaps11164;constitutive=1;rank=2 chr19a_19 . CDS 328462 329202 . - 0 ID=Thaps11164;Parent=Thaps11164;rank=1 chr19a_19 . exon 328462 329202 . - . ID=Thaps11164.1;Parent=Thaps11164;constitutive=1;rank=1 chr19a_19 . exon 320051 321750 . + . ID=Thaps25476.2;Parent=Thaps25476;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 ensembl protein_coding_gene 322163 323573 . + . ID=Thaps25477;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD84];external_name=Thaps25477;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 322163 323573 . + . ID=Thaps25477;Parent=Thaps25477;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 322163 322706 . + 0 ID=Thaps25477;Parent=Thaps25477;rank=1 chr19a_19 . exon 322163 322706 . + . ID=Thaps25477.1;Parent=Thaps25477;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 322946 323071 . + 0 ID=Thaps25477;Parent=Thaps25477;rank=2 chr19a_19 . exon 322946 323071 . + . ID=Thaps25477.2;Parent=Thaps25477;constitutive=1;rank=2 chr19a_19 . CDS 323155 323573 . + 0 ID=Thaps25477;Parent=Thaps25477;rank=3 chr19a_19 . exon 323155 323573 . + . ID=Thaps25477.3;Parent=Thaps25477;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 323686 325449 . - . ID=Thaps25478;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD85];external_name=Thaps25478;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 323686 325449 . - . ID=Thaps25478;Parent=Thaps25478;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 323686 325449 . - 0 ID=Thaps25478;Parent=Thaps25478;rank=1 chr19a_19 . exon 323686 325449 . - . ID=Thaps25478.1;Parent=Thaps25478;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 330649 332413 . + . ID=Thaps11165;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD89];external_name=Thaps11165;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 330649 332413 . + . ID=Thaps11165;Parent=Thaps11165;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 330649 330991 . + 0 ID=Thaps11165;Parent=Thaps11165;rank=1 chr19a_19 . exon 330649 330991 . + . ID=Thaps11165.1;Parent=Thaps11165;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 331063 331191 . + 0 ID=Thaps11165;Parent=Thaps11165;rank=2 chr19a_19 . exon 331063 331191 . + . ID=Thaps11165.2;Parent=Thaps11165;constitutive=1;rank=2 chr19a_19 . CDS 331296 332413 . + 0 ID=Thaps11165;Parent=Thaps11165;rank=3 chr19a_19 . exon 331296 332413 . + . ID=Thaps11165.3;Parent=Thaps11165;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 333085 334002 . + . ID=Thaps11166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD90];external_name=Thaps11166;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 333085 334002 . + . ID=Thaps11166;Parent=Thaps11166;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 333085 334002 . + 0 ID=Thaps11166;Parent=Thaps11166;rank=1 chr19a_19 . exon 333085 334002 . + . ID=Thaps11166.1;Parent=Thaps11166;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 334221 338299 . - . ID=Thaps11167;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD91];external_name=Thaps11167;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 334221 338299 . - . ID=Thaps11167;Parent=Thaps11167;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 334221 335328 . - 0 ID=Thaps11167;Parent=Thaps11167;rank=8 chr19a_19 . exon 334221 335328 . - . ID=Thaps11167.8;Parent=Thaps11167;constitutive=1;ensembl_end_phase=1;rank=8 chr19a_19 . CDS 335414 335616 . - 0 ID=Thaps11167;Parent=Thaps11167;rank=7 chr19a_19 . exon 335414 335616 . - . ID=Thaps11167.7;Parent=Thaps11167;constitutive=1;ensembl_end_phase=2;rank=7 chr19a_19 . CDS 335706 336528 . - 0 ID=Thaps11167;Parent=Thaps11167;rank=6 chr19a_19 . exon 335706 336528 . - . ID=Thaps11167.6;Parent=Thaps11167;constitutive=1;ensembl_end_phase=1;rank=6 chr19a_19 . CDS 336617 336728 . - 0 ID=Thaps11167;Parent=Thaps11167;rank=5 chr19a_19 . exon 336617 336728 . - . ID=Thaps11167.5;Parent=Thaps11167;constitutive=1;ensembl_end_phase=1;rank=5 chr19a_19 . CDS 336819 336897 . - 0 ID=Thaps11167;Parent=Thaps11167;rank=4 chr19a_19 . exon 336819 336897 . - . ID=Thaps11167.4;Parent=Thaps11167;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 336975 337211 . - 0 ID=Thaps11167;Parent=Thaps11167;rank=3 chr19a_19 . exon 336975 337211 . - . ID=Thaps11167.3;Parent=Thaps11167;constitutive=1;rank=3 chr19a_19 . CDS 337303 337578 . - 0 ID=Thaps11167;Parent=Thaps11167;rank=2 chr19a_19 . exon 337303 337578 . - . ID=Thaps11167.2;Parent=Thaps11167;constitutive=1;rank=2 chr19a_19 . CDS 337682 338299 . - 0 ID=Thaps11167;Parent=Thaps11167;rank=1 chr19a_19 . exon 337682 338299 . - . ID=Thaps11167.1;Parent=Thaps11167;constitutive=1;rank=1 chr19a_19 . repeat_region 342481 342489 . ? . description=dust chr19a_19 . repeat_region 342547 342554 . ? . description=dust chr19a_19 . repeat_region 343220 343227 . ? . description=dust chr19a_19 ensembl protein_coding_gene 339719 341456 . + . ID=Thaps11168;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD92];external_name=Thaps11168;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 339719 341456 . + . ID=Thaps11168;Parent=Thaps11168;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 339719 339878 . + 0 ID=Thaps11168;Parent=Thaps11168;rank=1 chr19a_19 . exon 339719 339878 . + . ID=Thaps11168.1;Parent=Thaps11168;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 340143 340892 . + 0 ID=Thaps11168;Parent=Thaps11168;rank=2 chr19a_19 . exon 340143 340892 . + . ID=Thaps11168.2;Parent=Thaps11168;constitutive=1;rank=2 chr19a_19 . CDS 340978 341456 . + 0 ID=Thaps11168;Parent=Thaps11168;rank=3 chr19a_19 . exon 340978 341456 . + . ID=Thaps11168.3;Parent=Thaps11168;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 341664 342604 . + . ID=Thaps11169;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD93];external_name=Thaps11169;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 341664 342604 . + . ID=Thaps11169;Parent=Thaps11169;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 341664 341666 . + 0 ID=Thaps11169;Parent=Thaps11169;rank=1 chr19a_19 . exon 341664 341666 . + . ID=Thaps11169.1;Parent=Thaps11169;constitutive=1;rank=1 chr19a_19 . CDS 341840 341953 . + 0 ID=Thaps11169;Parent=Thaps11169;rank=2 chr19a_19 . exon 341840 341953 . + . ID=Thaps11169.2;Parent=Thaps11169;constitutive=1;rank=2 chr19a_19 . CDS 341995 342148 . + 0 ID=Thaps11169;Parent=Thaps11169;rank=3 chr19a_19 . exon 341995 342148 . + . ID=Thaps11169.3;Parent=Thaps11169;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 342288 342402 . + 0 ID=Thaps11169;Parent=Thaps11169;rank=4 chr19a_19 . exon 342288 342402 . + . ID=Thaps11169.4;Parent=Thaps11169;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 342574 342604 . + 0 ID=Thaps11169;Parent=Thaps11169;rank=5 chr19a_19 . exon 342574 342604 . + . ID=Thaps11169.5;Parent=Thaps11169;constitutive=1;ensembl_end_phase=1;rank=5 chr19a_19 ensembl protein_coding_gene 344328 344969 . - . ID=Thaps11171;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD95];external_name=Thaps11171;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 344328 344969 . - . ID=Thaps11171;Parent=Thaps11171;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 344328 344969 . - 0 ID=Thaps11171;Parent=Thaps11171;rank=1 chr19a_19 . exon 344328 344969 . - . ID=Thaps11171.1;Parent=Thaps11171;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 345368 346072 . + . ID=Thaps11172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD96];external_name=Thaps11172;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 345368 346072 . + . ID=Thaps11172;Parent=Thaps11172;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 345368 346072 . + 0 ID=Thaps11172;Parent=Thaps11172;rank=1 chr19a_19 . exon 345368 346072 . + . ID=Thaps11172.1;Parent=Thaps11172;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 346273 347168 . - . ID=Thaps11173;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD97];external_name=Thaps11173;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 346273 347168 . - . ID=Thaps11173;Parent=Thaps11173;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 346273 346480 . - 0 ID=Thaps11173;Parent=Thaps11173;rank=2 chr19a_19 . exon 346273 346480 . - . ID=Thaps11173.2;Parent=Thaps11173;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 346567 347168 . - 0 ID=Thaps11173;Parent=Thaps11173;rank=1 chr19a_19 . exon 346567 347168 . - . ID=Thaps11173.1;Parent=Thaps11173;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 347513 348772 . + . ID=Thaps11174;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD98];external_name=Thaps11174;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 347513 348772 . + . ID=Thaps11174;Parent=Thaps11174;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 347513 348772 . + 0 ID=Thaps11174;Parent=Thaps11174;rank=1 chr19a_19 . exon 347513 348772 . + . ID=Thaps11174.1;Parent=Thaps11174;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 343404 343903 . - . ID=Thaps38261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD94];external_name=Thaps38261;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 343404 343903 . - . ID=Thaps38261;Parent=Thaps38261;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 343404 343652 . - 0 ID=Thaps38261;Parent=Thaps38261;rank=2 chr19a_19 . exon 343404 343652 . - . ID=Thaps38261.2;Parent=Thaps38261;constitutive=1;rank=2 chr19a_19 . CDS 343838 343903 . - 0 ID=Thaps38261;Parent=Thaps38261;rank=1 chr19a_19 . exon 343838 343903 . - . ID=Thaps38261.1;Parent=Thaps38261;constitutive=1;rank=1 chr19a_19 . repeat_region 352886 352910 . ? . description=trf chr19a_19 ensembl protein_coding_gene 350244 352309 . + . ID=Thaps11175;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LD99];external_name=Thaps11175;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 350244 352309 . + . ID=Thaps11175;Parent=Thaps11175;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 350244 351854 . + 0 ID=Thaps11175;Parent=Thaps11175;rank=1 chr19a_19 . exon 350244 351854 . + . ID=Thaps11175.1;Parent=Thaps11175;constitutive=1;rank=1 chr19a_19 . CDS 351974 352309 . + 0 ID=Thaps11175;Parent=Thaps11175;rank=2 chr19a_19 . exon 351974 352309 . + . ID=Thaps11175.2;Parent=Thaps11175;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 352970 354703 . + . ID=Thaps11176;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDA0];external_name=Thaps11176;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 352970 354703 . + . ID=Thaps11176;Parent=Thaps11176;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 352970 354166 . + 0 ID=Thaps11176;Parent=Thaps11176;rank=1 chr19a_19 . exon 352970 354166 . + . ID=Thaps11176.1;Parent=Thaps11176;constitutive=1;rank=1 chr19a_19 . CDS 354245 354703 . + 0 ID=Thaps11176;Parent=Thaps11176;rank=2 chr19a_19 . exon 354245 354703 . + . ID=Thaps11176.2;Parent=Thaps11176;constitutive=1;rank=2 chr19a_19 ensembl protein_coding_gene 355064 356170 . - . ID=Thaps11177;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDA1];external_name=Thaps11177;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 355064 356170 . - . ID=Thaps11177;Parent=Thaps11177;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 355064 355437 . - 0 ID=Thaps11177;Parent=Thaps11177;rank=2 chr19a_19 . exon 355064 355437 . - . ID=Thaps11177.2;Parent=Thaps11177;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 355534 356170 . - 0 ID=Thaps11177;Parent=Thaps11177;rank=1 chr19a_19 . exon 355534 356170 . - . ID=Thaps11177.1;Parent=Thaps11177;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 356949 357724 . - . ID=Thaps11178;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDA2];external_name=Thaps11178;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 356949 357724 . - . ID=Thaps11178;Parent=Thaps11178;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 356949 357076 . - 0 ID=Thaps11178;Parent=Thaps11178;rank=4 chr19a_19 . exon 356949 357076 . - . ID=Thaps11178.4;Parent=Thaps11178;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 357101 357326 . - 0 ID=Thaps11178;Parent=Thaps11178;rank=3 chr19a_19 . exon 357101 357326 . - . ID=Thaps11178.3;Parent=Thaps11178;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 357402 357479 . - 0 ID=Thaps11178;Parent=Thaps11178;rank=2 chr19a_19 . exon 357402 357479 . - . ID=Thaps11178.2;Parent=Thaps11178;constitutive=1;rank=2 chr19a_19 . CDS 357632 357724 . - 0 ID=Thaps11178;Parent=Thaps11178;rank=1 chr19a_19 . exon 357632 357724 . - . ID=Thaps11178.1;Parent=Thaps11178;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 357853 359487 . - . ID=Thaps11179;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDA3];external_name=Thaps11179;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 357853 359487 . - . ID=Thaps11179;Parent=Thaps11179;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 357853 359487 . - 0 ID=Thaps11179;Parent=Thaps11179;rank=1 chr19a_19 . exon 357853 359487 . - . ID=Thaps11179.1;Parent=Thaps11179;constitutive=1;rank=1 chr19a_19 . repeat_region 367580 367643 . ? . description=dust chr19a_19 ensembl protein_coding_gene 359839 362271 . - . ID=Thaps11180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDA4];external_name=Thaps11180;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 359839 362271 . - . ID=Thaps11180;Parent=Thaps11180;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 359839 362271 . - 0 ID=Thaps11180;Parent=Thaps11180;rank=1 chr19a_19 . exon 359839 362271 . - . ID=Thaps11180.1;Parent=Thaps11180;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 366571 367623 . - . ID=Thaps11182;biotype=protein_coding;description=3-hyroxyacyl CoA dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8LDA6];external_name=Thaps11182;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 366571 367623 . - . ID=Thaps11182;Parent=Thaps11182;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 366571 367623 . - 0 ID=Thaps11182;Parent=Thaps11182;rank=1 chr19a_19 . exon 366571 367623 . - . ID=Thaps11182.1;Parent=Thaps11182;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 367977 369159 . + . ID=Thaps11183;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDA7];external_name=Thaps11183;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 367977 369159 . + . ID=Thaps11183;Parent=Thaps11183;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 367977 368234 . + 0 ID=Thaps11183;Parent=Thaps11183;rank=1 chr19a_19 . exon 367977 368234 . + . ID=Thaps11183.1;Parent=Thaps11183;constitutive=1;rank=1 chr19a_19 . CDS 368337 368631 . + 0 ID=Thaps11183;Parent=Thaps11183;rank=2 chr19a_19 . CDS 368726 369159 . + 0 ID=Thaps11183;Parent=Thaps11183;rank=3 chr19a_19 ensembl protein_coding_gene 364435 366277 . + . ID=Thaps38266;biotype=protein_coding;description=Glucose-6-phosphate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8LDA5];external_name=GPI1;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 364435 366277 . + . ID=Thaps38266;Parent=Thaps38266;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 364435 365209 . + 0 ID=Thaps38266;Parent=Thaps38266;rank=1 chr19a_19 . exon 364435 365209 . + . ID=Thaps38266.1;Parent=Thaps38266;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 365292 365392 . + 0 ID=Thaps38266;Parent=Thaps38266;rank=2 chr19a_19 . exon 365292 365392 . + . ID=Thaps38266.2;Parent=Thaps38266;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 365486 366277 . + 0 ID=Thaps38266;Parent=Thaps38266;rank=3 chr19a_19 . exon 365486 366277 . + . ID=Thaps38266.3;Parent=Thaps38266;constitutive=1;rank=3 chr19a_19 . repeat_region 370873 370906 . ? . description=trf chr19a_19 . exon 368337 368631 . + . ID=Thaps11183.2;Parent=Thaps11183;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . exon 368726 369159 . + . ID=Thaps11183.3;Parent=Thaps11183;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 369892 371079 . - . ID=Thaps11184;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDA8];external_name=Thaps11184;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 369892 371079 . - . ID=Thaps11184;Parent=Thaps11184;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 369892 371079 . - 0 ID=Thaps11184;Parent=Thaps11184;rank=1 chr19a_19 . exon 369892 371079 . - . ID=Thaps11184.1;Parent=Thaps11184;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 371485 372153 . + . ID=Thaps11185;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDA9];external_name=Thaps11185;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 371485 372153 . + . ID=Thaps11185;Parent=Thaps11185;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 371485 372153 . + 0 ID=Thaps11185;Parent=Thaps11185;rank=1 chr19a_19 . exon 371485 372153 . + . ID=Thaps11185.1;Parent=Thaps11185;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 373406 374725 . + . ID=Thaps11186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB0];external_name=Thaps11186;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 373406 374725 . + . ID=Thaps11186;Parent=Thaps11186;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 373406 374725 . + 0 ID=Thaps11186;Parent=Thaps11186;rank=1 chr19a_19 . exon 373406 374725 . + . ID=Thaps11186.1;Parent=Thaps11186;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 375650 376960 . + . ID=Thaps11187;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB1];external_name=Thaps11187;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 375650 376960 . + . ID=Thaps11187;Parent=Thaps11187;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 375650 376960 . + 0 ID=Thaps11187;Parent=Thaps11187;rank=1 chr19a_19 . exon 375650 376960 . + . ID=Thaps11187.1;Parent=Thaps11187;constitutive=1;rank=1 chr19a_19 . repeat_region 382055 382134 . ? . description=dust chr19a_19 ensembl protein_coding_gene 383393 386665 . + . ID=Thaps11189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB3];external_name=Thaps11189;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 383393 386665 . + . ID=Thaps11189;Parent=Thaps11189;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 383393 386665 . + 0 ID=Thaps11189;Parent=Thaps11189;rank=1 chr19a_19 . exon 383393 386665 . + . ID=Thaps11189.1;Parent=Thaps11189;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 378801 381773 . - . ID=Thaps38230;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB2];external_name=Thaps38230;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 378801 381773 . - . ID=Thaps38230;Parent=Thaps38230;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 378801 379481 . - 0 ID=Thaps38230;Parent=Thaps38230;rank=5 chr19a_19 . exon 378801 379481 . - . ID=Thaps38230.5;Parent=Thaps38230;constitutive=1;rank=5 chr19a_19 . CDS 379578 381220 . - 0 ID=Thaps38230;Parent=Thaps38230;rank=4 chr19a_19 . exon 379578 381220 . - . ID=Thaps38230.4;Parent=Thaps38230;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 381302 381409 . - 0 ID=Thaps38230;Parent=Thaps38230;rank=3 chr19a_19 . exon 381302 381409 . - . ID=Thaps38230.3;Parent=Thaps38230;constitutive=1;rank=3 chr19a_19 . CDS 381473 381513 . - 0 ID=Thaps38230;Parent=Thaps38230;rank=2 chr19a_19 . exon 381473 381513 . - . ID=Thaps38230.2;Parent=Thaps38230;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 381580 381773 . - 0 ID=Thaps38230;Parent=Thaps38230;rank=1 chr19a_19 . exon 381580 381773 . - . ID=Thaps38230.1;Parent=Thaps38230;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . repeat_region 388686 388714 . ? . description=trf chr19a_19 . repeat_region 396578 396614 . ? . description=trf chr19a_19 . repeat_region 396581 396612 . ? . description=trf chr19a_19 ensembl protein_coding_gene 391245 392366 . + . ID=Thaps11191;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB5];external_name=Thaps11191;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 391245 392366 . + . ID=Thaps11191;Parent=Thaps11191;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 391245 392013 . + 0 ID=Thaps11191;Parent=Thaps11191;rank=1 chr19a_19 . exon 391245 392013 . + . ID=Thaps11191.1;Parent=Thaps11191;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 392128 392366 . + 0 ID=Thaps11191;Parent=Thaps11191;rank=2 chr19a_19 . exon 392128 392366 . + . ID=Thaps11191.2;Parent=Thaps11191;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 ensembl protein_coding_gene 392509 397704 . - . ID=Thaps25480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB6];external_name=Thaps25480;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 392509 397704 . - . ID=Thaps25480;Parent=Thaps25480;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 392509 394413 . - 0 ID=Thaps25480;Parent=Thaps25480;rank=5 chr19a_19 . exon 392509 394413 . - . ID=Thaps25480.5;Parent=Thaps25480;constitutive=1;rank=5 chr19a_19 . CDS 394454 394678 . - 0 ID=Thaps25480;Parent=Thaps25480;rank=4 chr19a_19 . exon 394454 394678 . - . ID=Thaps25480.4;Parent=Thaps25480;constitutive=1;rank=4 chr19a_19 . CDS 394769 395221 . - 0 ID=Thaps25480;Parent=Thaps25480;rank=3 chr19a_19 . exon 394769 395221 . - . ID=Thaps25480.3;Parent=Thaps25480;constitutive=1;rank=3 chr19a_19 . CDS 395311 395780 . - 0 ID=Thaps25480;Parent=Thaps25480;rank=2 chr19a_19 . exon 395311 395780 . - . ID=Thaps25480.2;Parent=Thaps25480;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 395814 397704 . - 0 ID=Thaps25480;Parent=Thaps25480;rank=1 chr19a_19 . exon 395814 397704 . - . ID=Thaps25480.1;Parent=Thaps25480;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 388934 389734 . - . ID=Thaps30457;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB4];external_name=Thaps30457;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 388934 389734 . - . ID=Thaps30457;Parent=Thaps30457;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 388934 389734 . - 0 ID=Thaps30457;Parent=Thaps30457;rank=1 chr19a_19 . exon 388934 389734 . - . ID=Thaps30457.1;Parent=Thaps30457;constitutive=1;rank=1 chr19a_19 . repeat_region 403518 403548 . ? . description=dust chr19a_19 . repeat_region 405471 405517 . ? . description=dust chr19a_19 ensembl protein_coding_gene 398241 399590 . + . ID=Thaps11193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB7];external_name=Thaps11193;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 398241 399590 . + . ID=Thaps11193;Parent=Thaps11193;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 398241 399590 . + 0 ID=Thaps11193;Parent=Thaps11193;rank=1 chr19a_19 . exon 398241 399590 . + . ID=Thaps11193.1;Parent=Thaps11193;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 399702 400970 . - . ID=Thaps11194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB8];external_name=Thaps11194;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 399702 400970 . - . ID=Thaps11194;Parent=Thaps11194;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 399702 400970 . - 0 ID=Thaps11194;Parent=Thaps11194;rank=1 chr19a_19 . exon 399702 400970 . - . ID=Thaps11194.1;Parent=Thaps11194;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 401222 402655 . - . ID=Thaps11195;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDB9];external_name=Thaps11195;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 401222 402655 . - . ID=Thaps11195;Parent=Thaps11195;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 401222 401748 . - 0 ID=Thaps11195;Parent=Thaps11195;rank=3 chr19a_19 . exon 401222 401748 . - . ID=Thaps11195.3;Parent=Thaps11195;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 401782 402057 . - 0 ID=Thaps11195;Parent=Thaps11195;rank=2 chr19a_19 . exon 401782 402057 . - . ID=Thaps11195.2;Parent=Thaps11195;constitutive=1;rank=2 chr19a_19 . CDS 402328 402655 . - 0 ID=Thaps11195;Parent=Thaps11195;rank=1 chr19a_19 . exon 402328 402655 . - . ID=Thaps11195.1;Parent=Thaps11195;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 402841 404352 . + . ID=Thaps11196;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDC0];external_name=Thaps11196;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 402841 404352 . + . ID=Thaps11196;Parent=Thaps11196;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 402841 404352 . + 0 ID=Thaps11196;Parent=Thaps11196;rank=1 chr19a_19 . exon 402841 404352 . + . ID=Thaps11196.1;Parent=Thaps11196;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 406375 413772 . - . ID=Thaps12758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDC1];external_name=Thaps12758;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 406375 413772 . - . ID=Thaps12758;Parent=Thaps12758;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 406375 406571 . - 0 ID=Thaps12758;Parent=Thaps12758;rank=6 chr19a_19 . exon 406375 406571 . - . ID=Thaps12758.6;Parent=Thaps12758;constitutive=1;ensembl_end_phase=2;rank=6 chr19a_19 . CDS 406735 406806 . - 0 ID=Thaps12758;Parent=Thaps12758;rank=5 chr19a_19 . exon 406735 406806 . - . ID=Thaps12758.5;Parent=Thaps12758;constitutive=1;rank=5 chr19a_19 . CDS 406876 406954 . - 0 ID=Thaps12758;Parent=Thaps12758;rank=4 chr19a_19 . exon 406876 406954 . - . ID=Thaps12758.4;Parent=Thaps12758;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 407114 407378 . - 0 ID=Thaps12758;Parent=Thaps12758;rank=3 chr19a_19 . exon 407114 407378 . - . ID=Thaps12758.3;Parent=Thaps12758;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 413153 413409 . - 0 ID=Thaps12758;Parent=Thaps12758;rank=2 chr19a_19 . CDS 413566 413772 . - 0 ID=Thaps12758;Parent=Thaps12758;rank=1 chr19a_19 . repeat_region 409299 409333 . ? . description=trf chr19a_19 . repeat_region 415307 415328 . ? . description=trf chr19a_19 ensembl protein_coding_gene 415712 418905 . + . ID=Thaps11199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDC2];external_name=Thaps11199;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 415712 418905 . + . ID=Thaps11199;Parent=Thaps11199;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 415712 416727 . + 0 ID=Thaps11199;Parent=Thaps11199;rank=1 chr19a_19 . exon 415712 416727 . + . ID=Thaps11199.1;Parent=Thaps11199;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 416791 418094 . + 0 ID=Thaps11199;Parent=Thaps11199;rank=2 chr19a_19 . exon 416791 418094 . + . ID=Thaps11199.2;Parent=Thaps11199;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 418184 418905 . + 0 ID=Thaps11199;Parent=Thaps11199;rank=3 chr19a_19 . exon 413153 413409 . - . ID=Thaps12758.2;Parent=Thaps12758;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . exon 413566 413772 . - . ID=Thaps12758.1;Parent=Thaps12758;constitutive=1;rank=1 chr19a_19 . repeat_region 420622 420642 . ? . description=dust chr19a_19 . repeat_region 424213 424232 . ? . description=dust chr19a_19 . exon 418184 418905 . + . ID=Thaps11199.3;Parent=Thaps11199;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 419378 420091 . - . ID=Thaps25483;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDC3];external_name=Thaps25483;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 419378 420091 . - . ID=Thaps25483;Parent=Thaps25483;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 419378 420091 . - 0 ID=Thaps25483;Parent=Thaps25483;rank=1 chr19a_19 . exon 419378 420091 . - . ID=Thaps25483.1;Parent=Thaps25483;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 420983 422875 . - . ID=Thaps25484;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDC4];external_name=Thaps25484;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 420983 422875 . - . ID=Thaps25484;Parent=Thaps25484;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 420983 422875 . - 0 ID=Thaps25484;Parent=Thaps25484;rank=1 chr19a_19 . exon 420983 422875 . - . ID=Thaps25484.1;Parent=Thaps25484;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 425659 431165 . - . ID=Thaps25485;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDC6];external_name=Thaps25485;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 425659 431165 . - . ID=Thaps25485;Parent=Thaps25485;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 425659 427586 . - 0 ID=Thaps25485;Parent=Thaps25485;rank=2 chr19a_19 . exon 425659 427586 . - . ID=Thaps25485.2;Parent=Thaps25485;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 427661 431165 . - 0 ID=Thaps25485;Parent=Thaps25485;rank=1 chr19a_19 . exon 427661 431165 . - . ID=Thaps25485.1;Parent=Thaps25485;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 424958 425152 . - . ID=Thaps264596;biotype=protein_coding;description=Putative uncharacterized protein HSF19 [Source:UniProtKB/TrEMBL%3BAcc:B8LDC5];external_name=HSF19;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 424958 425152 . - . ID=Thaps264596;Parent=Thaps264596;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 424958 425152 . - 0 ID=Thaps264596;Parent=Thaps264596;rank=1 chr19a_19 . exon 424958 425152 . - . ID=Thaps264596.1;Parent=Thaps264596;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 435861 438007 . + . ID=Thaps11205;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDC8];external_name=Thaps11205;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 435861 438007 . + . ID=Thaps11205;Parent=Thaps11205;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 435861 436043 . + 0 ID=Thaps11205;Parent=Thaps11205;rank=1 chr19a_19 . exon 435861 436043 . + . ID=Thaps11205.1;Parent=Thaps11205;constitutive=1;rank=1 chr19a_19 . CDS 436122 436160 . + 0 ID=Thaps11205;Parent=Thaps11205;rank=2 chr19a_19 . exon 436122 436160 . + . ID=Thaps11205.2;Parent=Thaps11205;constitutive=1;rank=2 chr19a_19 . CDS 436266 437693 . + 0 ID=Thaps11205;Parent=Thaps11205;rank=3 chr19a_19 . exon 436266 437693 . + . ID=Thaps11205.3;Parent=Thaps11205;constitutive=1;rank=3 chr19a_19 . CDS 437837 438007 . + 0 ID=Thaps11205;Parent=Thaps11205;rank=4 chr19a_19 . exon 437837 438007 . + . ID=Thaps11205.4;Parent=Thaps11205;constitutive=1;rank=4 chr19a_19 ensembl protein_coding_gene 432017 434468 . - . ID=Thaps25486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDC7];external_name=Thaps25486;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 432017 434468 . - . ID=Thaps25486;Parent=Thaps25486;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 432017 432201 . - 0 ID=Thaps25486;Parent=Thaps25486;rank=4 chr19a_19 . exon 432017 432201 . - . ID=Thaps25486.4;Parent=Thaps25486;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 432348 432405 . - 0 ID=Thaps25486;Parent=Thaps25486;rank=3 chr19a_19 . exon 432348 432405 . - . ID=Thaps25486.3;Parent=Thaps25486;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 432578 432960 . - 0 ID=Thaps25486;Parent=Thaps25486;rank=2 chr19a_19 . exon 432578 432960 . - . ID=Thaps25486.2;Parent=Thaps25486;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 433034 434468 . - 0 ID=Thaps25486;Parent=Thaps25486;rank=1 chr19a_19 . exon 433034 434468 . - . ID=Thaps25486.1;Parent=Thaps25486;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . repeat_region 441206 441215 . ? . description=dust chr19a_19 . repeat_region 442666 442689 . ? . description=trf chr19a_19 . repeat_region 442666 442689 . ? . description=dust chr19a_19 . repeat_region 443302 443314 . ? . description=dust chr19a_19 . repeat_region 447400 450509 . + . description=Harbinger3_TP chr19a_19 . repeat_region 447618 447625 . ? . description=dust chr19a_19 . repeat_region 447779 447819 . ? . description=trf chr19a_19 . repeat_region 447864 447940 . ? . description=dust chr19a_19 . repeat_region 447864 447946 . ? . description=trf chr19a_19 ensembl protein_coding_gene 444793 447183 . - . ID=Thaps11208;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD0];external_name=Thaps11208;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 444793 447183 . - . ID=Thaps11208;Parent=Thaps11208;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 444793 447183 . - 0 ID=Thaps11208;Parent=Thaps11208;rank=1 chr19a_19 . exon 444793 447183 . - . ID=Thaps11208.1;Parent=Thaps11208;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 443472 444672 . + . ID=Thaps25487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDC9];external_name=Thaps25487;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 443472 444672 . + . ID=Thaps25487;Parent=Thaps25487;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 443472 443877 . + 0 ID=Thaps25487;Parent=Thaps25487;rank=1 chr19a_19 . exon 443472 443877 . + . ID=Thaps25487.1;Parent=Thaps25487;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 444005 444672 . + 0 ID=Thaps25487;Parent=Thaps25487;rank=2 chr19a_19 . exon 444005 444672 . + . ID=Thaps25487.2;Parent=Thaps25487;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 ensembl protein_coding_gene 451790 452143 . - . ID=Thaps11209;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD1];external_name=Thaps11209;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 451790 452143 . - . ID=Thaps11209;Parent=Thaps11209;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 451790 452143 . - 0 ID=Thaps11209;Parent=Thaps11209;rank=1 chr19a_19 . exon 451790 452143 . - . ID=Thaps11209.1;Parent=Thaps11209;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 452666 456737 . - . ID=Thaps25488;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD2];external_name=Thaps25488;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 452666 456737 . - . ID=Thaps25488;Parent=Thaps25488;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 452666 452827 . - 0 ID=Thaps25488;Parent=Thaps25488;rank=5 chr19a_19 . exon 452666 452827 . - . ID=Thaps25488.5;Parent=Thaps25488;constitutive=1;rank=5 chr19a_19 . CDS 452924 453258 . - 0 ID=Thaps25488;Parent=Thaps25488;rank=4 chr19a_19 . exon 452924 453258 . - . ID=Thaps25488.4;Parent=Thaps25488;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 453289 453595 . - 0 ID=Thaps25488;Parent=Thaps25488;rank=3 chr19a_19 . exon 453289 453595 . - . ID=Thaps25488.3;Parent=Thaps25488;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 453676 455503 . - 0 ID=Thaps25488;Parent=Thaps25488;rank=2 chr19a_19 . exon 453676 455503 . - . ID=Thaps25488.2;Parent=Thaps25488;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 455608 456737 . - 0 ID=Thaps25488;Parent=Thaps25488;rank=1 chr19a_19 . exon 455608 456737 . - . ID=Thaps25488.1;Parent=Thaps25488;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . repeat_region 458432 458452 . ? . description=trf chr19a_19 . repeat_region 458432 458452 . ? . description=dust chr19a_19 . repeat_region 461259 461334 . ? . description=trf chr19a_19 ensembl protein_coding_gene 458336 461161 . - . ID=Thaps11211;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD3];external_name=Thaps11211;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 458336 461161 . - . ID=Thaps11211;Parent=Thaps11211;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 458336 458710 . - 0 ID=Thaps11211;Parent=Thaps11211;rank=9 chr19a_19 . exon 458336 458710 . - . ID=Thaps11211.9;Parent=Thaps11211;constitutive=1;rank=9 chr19a_19 . CDS 458802 458852 . - 0 ID=Thaps11211;Parent=Thaps11211;rank=8 chr19a_19 . exon 458802 458852 . - . ID=Thaps11211.8;Parent=Thaps11211;constitutive=1;rank=8 chr19a_19 . CDS 458950 459018 . - 0 ID=Thaps11211;Parent=Thaps11211;rank=7 chr19a_19 . exon 458950 459018 . - . ID=Thaps11211.7;Parent=Thaps11211;constitutive=1;rank=7 chr19a_19 . CDS 459112 459180 . - 0 ID=Thaps11211;Parent=Thaps11211;rank=6 chr19a_19 . exon 459112 459180 . - . ID=Thaps11211.6;Parent=Thaps11211;constitutive=1;rank=6 chr19a_19 . CDS 459273 459508 . - 0 ID=Thaps11211;Parent=Thaps11211;rank=5 chr19a_19 . exon 459273 459508 . - . ID=Thaps11211.5;Parent=Thaps11211;constitutive=1;ensembl_end_phase=2;rank=5 chr19a_19 . CDS 459597 459710 . - 0 ID=Thaps11211;Parent=Thaps11211;rank=4 chr19a_19 . exon 459597 459710 . - . ID=Thaps11211.4;Parent=Thaps11211;constitutive=1;rank=4 chr19a_19 . CDS 459798 460095 . - 0 ID=Thaps11211;Parent=Thaps11211;rank=3 chr19a_19 . exon 459798 460095 . - . ID=Thaps11211.3;Parent=Thaps11211;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 460194 460457 . - 0 ID=Thaps11211;Parent=Thaps11211;rank=2 chr19a_19 . exon 460194 460457 . - . ID=Thaps11211.2;Parent=Thaps11211;constitutive=1;rank=2 chr19a_19 . CDS 460571 461161 . - 0 ID=Thaps11211;Parent=Thaps11211;rank=1 chr19a_19 . exon 460571 461161 . - . ID=Thaps11211.1;Parent=Thaps11211;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 463859 465405 . - . ID=Thaps11212;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD4];external_name=Thaps11212;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 463859 465405 . - . ID=Thaps11212;Parent=Thaps11212;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 463859 464880 . - 0 ID=Thaps11212;Parent=Thaps11212;rank=2 chr19a_19 . exon 463859 464880 . - . ID=Thaps11212.2;Parent=Thaps11212;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 464991 465405 . - 0 ID=Thaps11212;Parent=Thaps11212;rank=1 chr19a_19 . exon 464991 465405 . - . ID=Thaps11212.1;Parent=Thaps11212;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 465953 468273 . + . ID=Thaps11213;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD5];external_name=Thaps11213;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 465953 468273 . + . ID=Thaps11213;Parent=Thaps11213;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 465953 466900 . + 0 ID=Thaps11213;Parent=Thaps11213;rank=1 chr19a_19 . exon 465953 466900 . + . ID=Thaps11213.1;Parent=Thaps11213;constitutive=1;rank=1 chr19a_19 . CDS 467098 467423 . + 0 ID=Thaps11213;Parent=Thaps11213;rank=2 chr19a_19 . exon 467098 467423 . + . ID=Thaps11213.2;Parent=Thaps11213;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 467459 467600 . + 0 ID=Thaps11213;Parent=Thaps11213;rank=3 chr19a_19 . exon 467459 467600 . + . ID=Thaps11213.3;Parent=Thaps11213;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 467899 468273 . + 0 ID=Thaps11213;Parent=Thaps11213;rank=4 chr19a_19 . exon 467899 468273 . + . ID=Thaps11213.4;Parent=Thaps11213;constitutive=1;rank=4 chr19a_19 ensembl protein_coding_gene 468732 469259 . - . ID=Thaps11214;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD6];external_name=Thaps11214;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 468732 469259 . - . ID=Thaps11214;Parent=Thaps11214;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 468732 469259 . - 0 ID=Thaps11214;Parent=Thaps11214;rank=1 chr19a_19 . exon 468732 469259 . - . ID=Thaps11214.1;Parent=Thaps11214;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 473718 479010 . - . ID=Thaps11217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD9];external_name=Thaps11217;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 473718 479010 . - . ID=Thaps11217;Parent=Thaps11217;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 473718 473842 . - 0 ID=Thaps11217;Parent=Thaps11217;rank=8 chr19a_19 . exon 473718 473842 . - . ID=Thaps11217.8;Parent=Thaps11217;constitutive=1;ensembl_end_phase=2;rank=8 chr19a_19 . CDS 473998 474526 . - 0 ID=Thaps11217;Parent=Thaps11217;rank=7 chr19a_19 . exon 473998 474526 . - . ID=Thaps11217.7;Parent=Thaps11217;constitutive=1;ensembl_end_phase=1;rank=7 chr19a_19 . CDS 474690 477144 . - 0 ID=Thaps11217;Parent=Thaps11217;rank=6 chr19a_19 . exon 474690 477144 . - . ID=Thaps11217.6;Parent=Thaps11217;constitutive=1;ensembl_end_phase=1;rank=6 chr19a_19 . CDS 477201 477352 . - 0 ID=Thaps11217;Parent=Thaps11217;rank=5 chr19a_19 . exon 477201 477352 . - . ID=Thaps11217.5;Parent=Thaps11217;constitutive=1;ensembl_end_phase=2;rank=5 chr19a_19 . CDS 477419 477876 . - 0 ID=Thaps11217;Parent=Thaps11217;rank=4 chr19a_19 . exon 477419 477876 . - . ID=Thaps11217.4;Parent=Thaps11217;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 477960 478108 . - 0 ID=Thaps11217;Parent=Thaps11217;rank=3 chr19a_19 . CDS 478368 478716 . - 0 ID=Thaps11217;Parent=Thaps11217;rank=2 chr19a_19 . CDS 478788 479010 . - 0 ID=Thaps11217;Parent=Thaps11217;rank=1 chr19a_19 ensembl protein_coding_gene 469783 470506 . + . ID=Thaps17695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD7];external_name=Thaps17695;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 469783 470506 . + . ID=Thaps17695;Parent=Thaps17695;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 469783 469897 . + 0 ID=Thaps17695;Parent=Thaps17695;rank=1 chr19a_19 . exon 469783 469897 . + . ID=Thaps17695.1;Parent=Thaps17695;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 470025 470506 . + 0 ID=Thaps17695;Parent=Thaps17695;rank=2 chr19a_19 . exon 470025 470506 . + . ID=Thaps17695.2;Parent=Thaps17695;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 ensembl protein_coding_gene 471059 472519 . + . ID=Thaps42828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDD8];external_name=Thaps42828;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 471059 472519 . + . ID=Thaps42828;Parent=Thaps42828;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 471059 471304 . + 0 ID=Thaps42828;Parent=Thaps42828;rank=1 chr19a_19 . exon 471059 471304 . + . ID=Thaps42828.1;Parent=Thaps42828;constitutive=1;rank=1 chr19a_19 . CDS 471440 471714 . + 0 ID=Thaps42828;Parent=Thaps42828;rank=2 chr19a_19 . exon 471440 471714 . + . ID=Thaps42828.2;Parent=Thaps42828;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 471775 472519 . + 0 ID=Thaps42828;Parent=Thaps42828;rank=3 chr19a_19 . exon 471775 472519 . + . ID=Thaps42828.3;Parent=Thaps42828;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . repeat_region 479125 479192 . ? . description=trf chr19a_19 . repeat_region 479139 479191 . ? . description=trf chr19a_19 . repeat_region 479139 479224 . ? . description=trf chr19a_19 . repeat_region 479450 479585 . + . description=MuDR1_TP chr19a_19 . exon 477960 478108 . - . ID=Thaps11217.3;Parent=Thaps11217;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . exon 478368 478716 . - . ID=Thaps11217.2;Parent=Thaps11217;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . exon 478788 479010 . - . ID=Thaps11217.1;Parent=Thaps11217;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 480116 481853 . - . ID=Thaps11218;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDE0];external_name=Thaps11218;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 480116 481853 . - . ID=Thaps11218;Parent=Thaps11218;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 480116 480211 . - 0 ID=Thaps11218;Parent=Thaps11218;rank=2 chr19a_19 . exon 480116 480211 . - . ID=Thaps11218.2;Parent=Thaps11218;constitutive=1;rank=2 chr19a_19 . CDS 480312 481853 . - 0 ID=Thaps11218;Parent=Thaps11218;rank=1 chr19a_19 . exon 480312 481853 . - . ID=Thaps11218.1;Parent=Thaps11218;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 482264 488368 . + . ID=Thaps11219;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDE1];external_name=Thaps11219;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 482264 488368 . + . ID=Thaps11219;Parent=Thaps11219;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 482264 488368 . + 0 ID=Thaps11219;Parent=Thaps11219;rank=1 chr19a_19 . exon 482264 488368 . + . ID=Thaps11219.1;Parent=Thaps11219;constitutive=1;rank=1 chr19a_19 . repeat_region 491598 491627 . ? . description=dust chr19a_19 . repeat_region 495770 495795 . ? . description=dust chr19a_19 . repeat_region 496658 496698 . ? . description=dust chr19a_19 ensembl protein_coding_gene 488512 490737 . - . ID=Thaps11220;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDE2];external_name=Thaps11220;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 488512 490737 . - . ID=Thaps11220;Parent=Thaps11220;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 488512 490737 . - 0 ID=Thaps11220;Parent=Thaps11220;rank=1 chr19a_19 . exon 488512 490737 . - . ID=Thaps11220.1;Parent=Thaps11220;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 493627 497038 . - . ID=Thaps25490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDE4];external_name=Thaps25490;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 493627 497038 . - . ID=Thaps25490;Parent=Thaps25490;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 493627 493692 . - 0 ID=Thaps25490;Parent=Thaps25490;rank=5 chr19a_19 . exon 493627 493692 . - . ID=Thaps25490.5;Parent=Thaps25490;constitutive=1;rank=5 chr19a_19 . CDS 493749 494809 . - 0 ID=Thaps25490;Parent=Thaps25490;rank=4 chr19a_19 . exon 493749 494809 . - . ID=Thaps25490.4;Parent=Thaps25490;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 494838 494932 . - 0 ID=Thaps25490;Parent=Thaps25490;rank=3 chr19a_19 . exon 494838 494932 . - . ID=Thaps25490.3;Parent=Thaps25490;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 495044 496754 . - 0 ID=Thaps25490;Parent=Thaps25490;rank=2 chr19a_19 . exon 495044 496754 . - . ID=Thaps25490.2;Parent=Thaps25490;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 496861 497038 . - 0 ID=Thaps25490;Parent=Thaps25490;rank=1 chr19a_19 . exon 496861 497038 . - . ID=Thaps25490.1;Parent=Thaps25490;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 497595 500363 . + . ID=Thaps25491;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDE5];external_name=Thaps25491;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 497595 500363 . + . ID=Thaps25491;Parent=Thaps25491;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 497595 500363 . + 0 ID=Thaps25491;Parent=Thaps25491;rank=1 chr19a_19 . exon 497595 500363 . + . ID=Thaps25491.1;Parent=Thaps25491;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 492209 493454 . + . ID=Thaps264598;biotype=protein_coding;external_name=Thaps264598;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 492209 493454 . + . ID=Thaps264598;Parent=Thaps264598;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 492209 492329 . + 0 ID=Thaps264598;Parent=Thaps264598;rank=1 chr19a_19 . exon 492209 492329 . + . ID=Thaps264598.1;Parent=Thaps264598;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 492456 492944 . + 0 ID=Thaps264598;Parent=Thaps264598;rank=2 chr19a_19 . exon 492456 492944 . + . ID=Thaps264598.2;Parent=Thaps264598;constitutive=1;rank=2 chr19a_19 . CDS 493032 493106 . + 0 ID=Thaps264598;Parent=Thaps264598;rank=3 chr19a_19 . exon 493032 493106 . + . ID=Thaps264598.3;Parent=Thaps264598;constitutive=1;rank=3 chr19a_19 . CDS 493296 493454 . + 0 ID=Thaps264598;Parent=Thaps264598;rank=4 chr19a_19 . exon 493296 493454 . + . ID=Thaps264598.4;Parent=Thaps264598;constitutive=1;rank=4 chr19a_19 ensembl protein_coding_gene 501205 503138 . - . ID=Thaps11224;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDE6];external_name=Thaps11224;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 501205 503138 . - . ID=Thaps11224;Parent=Thaps11224;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 501205 501875 . - 0 ID=Thaps11224;Parent=Thaps11224;rank=3 chr19a_19 . exon 501205 501875 . - . ID=Thaps11224.3;Parent=Thaps11224;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 501959 502444 . - 0 ID=Thaps11224;Parent=Thaps11224;rank=2 chr19a_19 . exon 501959 502444 . - . ID=Thaps11224.2;Parent=Thaps11224;constitutive=1;rank=2 chr19a_19 . CDS 502550 503138 . - 0 ID=Thaps11224;Parent=Thaps11224;rank=1 chr19a_19 . exon 502550 503138 . - . ID=Thaps11224.1;Parent=Thaps11224;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 504383 505198 . + . ID=Thaps11225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDE8];external_name=Thaps11225;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 504383 505198 . + . ID=Thaps11225;Parent=Thaps11225;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 504383 505198 . + 0 ID=Thaps11225;Parent=Thaps11225;rank=1 chr19a_19 . exon 504383 505198 . + . ID=Thaps11225.1;Parent=Thaps11225;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 505345 507261 . - . ID=Thaps11226;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDE9];external_name=Thaps11226;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 505345 507261 . - . ID=Thaps11226;Parent=Thaps11226;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 505345 505887 . - 0 ID=Thaps11226;Parent=Thaps11226;rank=4 chr19a_19 . exon 505345 505887 . - . ID=Thaps11226.4;Parent=Thaps11226;constitutive=1;rank=4 chr19a_19 . CDS 505978 506542 . - 0 ID=Thaps11226;Parent=Thaps11226;rank=3 chr19a_19 . exon 505978 506542 . - . ID=Thaps11226.3;Parent=Thaps11226;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 506635 506797 . - 0 ID=Thaps11226;Parent=Thaps11226;rank=2 chr19a_19 . exon 506635 506797 . - . ID=Thaps11226.2;Parent=Thaps11226;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 506880 507261 . - 0 ID=Thaps11226;Parent=Thaps11226;rank=1 chr19a_19 . exon 506880 507261 . - . ID=Thaps11226.1;Parent=Thaps11226;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 507611 509057 . + . ID=Thaps11227;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF0];external_name=Thaps11227;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 507611 509057 . + . ID=Thaps11227;Parent=Thaps11227;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 507611 507858 . + 0 ID=Thaps11227;Parent=Thaps11227;rank=1 chr19a_19 . exon 507611 507858 . + . ID=Thaps11227.1;Parent=Thaps11227;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 507929 508191 . + 0 ID=Thaps11227;Parent=Thaps11227;rank=2 chr19a_19 . CDS 508375 508805 . + 0 ID=Thaps11227;Parent=Thaps11227;rank=3 chr19a_19 . CDS 508875 509057 . + 0 ID=Thaps11227;Parent=Thaps11227;rank=4 chr19a_19 ensembl protein_coding_gene 503701 503919 . - . ID=Thaps38270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDE7];external_name=Thaps38270;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 503701 503919 . - . ID=Thaps38270;Parent=Thaps38270;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 503701 503919 . - 0 ID=Thaps38270;Parent=Thaps38270;rank=1 chr19a_19 . exon 503701 503919 . - . ID=Thaps38270.1;Parent=Thaps38270;constitutive=1;rank=1 chr19a_19 . repeat_region 514041 514098 . ? . description=trf chr19a_19 . repeat_region 516730 516766 . ? . description=trf chr19a_19 . exon 507929 508191 . + . ID=Thaps11227.2;Parent=Thaps11227;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . exon 508375 508805 . + . ID=Thaps11227.3;Parent=Thaps11227;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . exon 508875 509057 . + . ID=Thaps11227.4;Parent=Thaps11227;constitutive=1;rank=4 chr19a_19 ensembl protein_coding_gene 509755 510996 . + . ID=Thaps11228;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF1];external_name=Thaps11228;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 509755 510996 . + . ID=Thaps11228;Parent=Thaps11228;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 509755 510996 . + 0 ID=Thaps11228;Parent=Thaps11228;rank=1 chr19a_19 . exon 509755 510996 . + . ID=Thaps11228.1;Parent=Thaps11228;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 511190 513919 . - . ID=Thaps11229;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF2];external_name=Thaps11229;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 511190 513919 . - . ID=Thaps11229;Parent=Thaps11229;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 511190 511807 . - 0 ID=Thaps11229;Parent=Thaps11229;rank=3 chr19a_19 . exon 511190 511807 . - . ID=Thaps11229.3;Parent=Thaps11229;constitutive=1;rank=3 chr19a_19 . CDS 511884 513389 . - 0 ID=Thaps11229;Parent=Thaps11229;rank=2 chr19a_19 . exon 511884 513389 . - . ID=Thaps11229.2;Parent=Thaps11229;constitutive=1;rank=2 chr19a_19 . CDS 513677 513919 . - 0 ID=Thaps11229;Parent=Thaps11229;rank=1 chr19a_19 . exon 513677 513919 . - . ID=Thaps11229.1;Parent=Thaps11229;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 515766 516671 . + . ID=Thaps11231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF4];external_name=Thaps11231;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 515766 516671 . + . ID=Thaps11231;Parent=Thaps11231;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 515766 516671 . + 0 ID=Thaps11231;Parent=Thaps11231;rank=1 chr19a_19 . exon 515766 516671 . + . ID=Thaps11231.1;Parent=Thaps11231;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 517066 517806 . + . ID=Thaps11232;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF5];external_name=Thaps11232;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 517066 517806 . + . ID=Thaps11232;Parent=Thaps11232;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 517066 517160 . + 0 ID=Thaps11232;Parent=Thaps11232;rank=1 chr19a_19 . exon 517066 517160 . + . ID=Thaps11232.1;Parent=Thaps11232;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 517222 517557 . + 0 ID=Thaps11232;Parent=Thaps11232;rank=2 chr19a_19 . exon 517222 517557 . + . ID=Thaps11232.2;Parent=Thaps11232;constitutive=1;rank=2 chr19a_19 . CDS 517593 517806 . + 0 ID=Thaps11232;Parent=Thaps11232;rank=3 chr19a_19 . exon 517593 517806 . + . ID=Thaps11232.3;Parent=Thaps11232;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 ensembl protein_coding_gene 514492 515415 . - . ID=Thaps25492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF3];external_name=Thaps25492;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 514492 515415 . - . ID=Thaps25492;Parent=Thaps25492;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 514492 515415 . - 0 ID=Thaps25492;Parent=Thaps25492;rank=1 chr19a_19 . exon 514492 515415 . - . ID=Thaps25492.1;Parent=Thaps25492;constitutive=1;rank=1 chr19a_19 . repeat_region 520660 520713 . ? . description=dust chr19a_19 . biological_region 525591 525592 0.999 + . logic_name=eponine chr19a_19 . repeat_region 527059 527071 . ? . description=dust chr19a_19 ensembl protein_coding_gene 520225 521599 . - . ID=Thaps11234;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF7];external_name=Thaps11234;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 520225 521599 . - . ID=Thaps11234;Parent=Thaps11234;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 520225 520635 . - 0 ID=Thaps11234;Parent=Thaps11234;rank=4 chr19a_19 . exon 520225 520635 . - . ID=Thaps11234.4;Parent=Thaps11234;constitutive=1;rank=4 chr19a_19 . CDS 520808 521308 . - 0 ID=Thaps11234;Parent=Thaps11234;rank=3 chr19a_19 . exon 520808 521308 . - . ID=Thaps11234.3;Parent=Thaps11234;constitutive=1;rank=3 chr19a_19 . CDS 521494 521509 . - 0 ID=Thaps11234;Parent=Thaps11234;rank=2 chr19a_19 . exon 521494 521509 . - . ID=Thaps11234.2;Parent=Thaps11234;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 521553 521599 . - 0 ID=Thaps11234;Parent=Thaps11234;rank=1 chr19a_19 . exon 521553 521599 . - . ID=Thaps11234.1;Parent=Thaps11234;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 522940 527713 . - . ID=Thaps11235;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF8];external_name=Thaps11235;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 522940 527713 . - . ID=Thaps11235;Parent=Thaps11235;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 522940 523506 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=10 chr19a_19 . exon 522940 523506 . - . ID=Thaps11235.10;Parent=Thaps11235;constitutive=1;rank=10 chr19a_19 . CDS 523603 524139 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=9 chr19a_19 . exon 523603 524139 . - . ID=Thaps11235.9;Parent=Thaps11235;constitutive=1;rank=9 chr19a_19 . CDS 524228 524341 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=8 chr19a_19 . exon 524228 524341 . - . ID=Thaps11235.8;Parent=Thaps11235;constitutive=1;rank=8 chr19a_19 . CDS 524411 524566 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=7 chr19a_19 . exon 524411 524566 . - . ID=Thaps11235.7;Parent=Thaps11235;constitutive=1;rank=7 chr19a_19 . CDS 524649 524711 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=6 chr19a_19 . exon 524649 524711 . - . ID=Thaps11235.6;Parent=Thaps11235;constitutive=1;rank=6 chr19a_19 . CDS 524794 524907 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=5 chr19a_19 . exon 524794 524907 . - . ID=Thaps11235.5;Parent=Thaps11235;constitutive=1;rank=5 chr19a_19 . CDS 524979 525873 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=4 chr19a_19 . exon 524979 525873 . - . ID=Thaps11235.4;Parent=Thaps11235;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 525978 526151 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=3 chr19a_19 . exon 525978 526151 . - . ID=Thaps11235.3;Parent=Thaps11235;constitutive=1;rank=3 chr19a_19 . CDS 526212 526334 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=2 chr19a_19 . exon 526212 526334 . - . ID=Thaps11235.2;Parent=Thaps11235;constitutive=1;rank=2 chr19a_19 . CDS 526446 527713 . - 0 ID=Thaps11235;Parent=Thaps11235;rank=1 chr19a_19 . exon 526446 527713 . - . ID=Thaps11235.1;Parent=Thaps11235;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 518740 519838 . + . ID=Thaps25493;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF6];external_name=Thaps25493;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 518740 519838 . + . ID=Thaps25493;Parent=Thaps25493;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 518740 518806 . + 0 ID=Thaps25493;Parent=Thaps25493;rank=1 chr19a_19 . exon 518740 518806 . + . ID=Thaps25493.1;Parent=Thaps25493;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 518909 519117 . + 0 ID=Thaps25493;Parent=Thaps25493;rank=2 chr19a_19 . exon 518909 519117 . + . ID=Thaps25493.2;Parent=Thaps25493;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 519230 519838 . + 0 ID=Thaps25493;Parent=Thaps25493;rank=3 chr19a_19 . exon 519230 519838 . + . ID=Thaps25493.3;Parent=Thaps25493;constitutive=1;rank=3 chr19a_19 . repeat_region 534826 534975 . ? . description=trf chr19a_19 . repeat_region 534826 534975 . ? . description=trf chr19a_19 ensembl protein_coding_gene 528487 529472 . + . ID=Thaps264601;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDF9];external_name=Thaps264601;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 528487 529472 . + . ID=Thaps264601;Parent=Thaps264601;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 528487 529472 . + 0 ID=Thaps264601;Parent=Thaps264601;rank=1 chr19a_19 . exon 528487 529472 . + . ID=Thaps264601.1;Parent=Thaps264601;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 532756 533753 . + . ID=Thaps264602;biotype=protein_coding;description=Chitinase [Source:UniProtKB/TrEMBL%3BAcc:B8LDG0];external_name=Thaps264602;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 532756 533753 . + . ID=Thaps264602;Parent=Thaps264602;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 532756 533753 . + 0 ID=Thaps264602;Parent=Thaps264602;rank=1 chr19a_19 . exon 532756 533753 . + . ID=Thaps264602.1;Parent=Thaps264602;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 536527 536733 . - . ID=Thaps264603;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDG1];external_name=Thaps264603;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 536527 536733 . - . ID=Thaps264603;Parent=Thaps264603;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 536527 536733 . - 0 ID=Thaps264603;Parent=Thaps264603;rank=1 chr19a_19 . exon 536527 536733 . - . ID=Thaps264603.1;Parent=Thaps264603;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 538691 542165 . + . ID=Thaps11239;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDG2];external_name=Thaps11239;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 538691 542165 . + . ID=Thaps11239;Parent=Thaps11239;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 538691 539361 . + 0 ID=Thaps11239;Parent=Thaps11239;rank=1 chr19a_19 . exon 538691 539361 . + . ID=Thaps11239.1;Parent=Thaps11239;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 539497 539564 . + 0 ID=Thaps11239;Parent=Thaps11239;rank=2 chr19a_19 . exon 539497 539564 . + . ID=Thaps11239.2;Parent=Thaps11239;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 539890 540540 . + 0 ID=Thaps11239;Parent=Thaps11239;rank=3 chr19a_19 . exon 539890 540540 . + . ID=Thaps11239.3;Parent=Thaps11239;constitutive=1;rank=3 chr19a_19 . CDS 540580 542165 . + 0 ID=Thaps11239;Parent=Thaps11239;rank=4 chr19a_19 . exon 540580 542165 . + . ID=Thaps11239.4;Parent=Thaps11239;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 ensembl protein_coding_gene 543116 544933 . - . ID=Thaps25494;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDG3];external_name=Thaps25494;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 543116 544933 . - . ID=Thaps25494;Parent=Thaps25494;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 543116 544084 . - 0 ID=Thaps25494;Parent=Thaps25494;rank=3 chr19a_19 . exon 543116 544084 . - . ID=Thaps25494.3;Parent=Thaps25494;constitutive=1;rank=3 chr19a_19 . CDS 544191 544519 . - 0 ID=Thaps25494;Parent=Thaps25494;rank=2 chr19a_19 . exon 544191 544519 . - . ID=Thaps25494.2;Parent=Thaps25494;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 544639 544933 . - 0 ID=Thaps25494;Parent=Thaps25494;rank=1 chr19a_19 . exon 544639 544933 . - . ID=Thaps25494.1;Parent=Thaps25494;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 545265 547541 . - . ID=Thaps25495;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDG4];external_name=Thaps25495;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 545265 547541 . - . ID=Thaps25495;Parent=Thaps25495;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 545265 545511 . - 0 ID=Thaps25495;Parent=Thaps25495;rank=7 chr19a_19 . exon 545265 545511 . - . ID=Thaps25495.7;Parent=Thaps25495;constitutive=1;ensembl_end_phase=1;rank=7 chr19a_19 . CDS 545618 545939 . - 0 ID=Thaps25495;Parent=Thaps25495;rank=6 chr19a_19 . exon 545618 545939 . - . ID=Thaps25495.6;Parent=Thaps25495;constitutive=1;ensembl_end_phase=1;rank=6 chr19a_19 . CDS 546037 546539 . - 0 ID=Thaps25495;Parent=Thaps25495;rank=5 chr19a_19 . exon 546037 546539 . - . ID=Thaps25495.5;Parent=Thaps25495;constitutive=1;ensembl_end_phase=2;rank=5 chr19a_19 . CDS 546630 546657 . - 0 ID=Thaps25495;Parent=Thaps25495;rank=4 chr19a_19 . exon 546630 546657 . - . ID=Thaps25495.4;Parent=Thaps25495;constitutive=1;ensembl_end_phase=1;rank=4 chr19a_19 . CDS 546738 546816 . - 0 ID=Thaps25495;Parent=Thaps25495;rank=3 chr19a_19 . exon 546738 546816 . - . ID=Thaps25495.3;Parent=Thaps25495;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 546882 546968 . - 0 ID=Thaps25495;Parent=Thaps25495;rank=2 chr19a_19 . exon 546882 546968 . - . ID=Thaps25495.2;Parent=Thaps25495;constitutive=1;rank=2 chr19a_19 . CDS 547104 547541 . - 0 ID=Thaps25495;Parent=Thaps25495;rank=1 chr19a_19 . exon 547104 547541 . - . ID=Thaps25495.1;Parent=Thaps25495;constitutive=1;rank=1 chr19a_19 . repeat_region 552298 552347 . ? . description=dust chr19a_19 . repeat_region 552351 553165 . + . description=tp9_ASNotSingleton chr19a_19 . repeat_region 554008 554026 . ? . description=dust chr19a_19 . repeat_region 556346 556368 . ? . description=trf chr19a_19 . repeat_region 556346 556368 . ? . description=dust chr19a_19 ensembl rRNA_gene 547658 547763 . + . ID=EPrTPOG00000000112;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr19a_19 ensembl rRNA 547658 547763 . + . ID=EPrTPOT00000000112;Parent=EPrTPOG00000000112;biotype=rRNA;logic_name=ncrna_eg chr19a_19 . exon 547658 547763 . + . ID=EPrTPOE00000000112;Parent=EPrTPOT00000000112;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 548460 549122 . - . ID=Thaps11242;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDG5];external_name=Thaps11242;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 548460 549122 . - . ID=Thaps11242;Parent=Thaps11242;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 548460 549122 . - 0 ID=Thaps11242;Parent=Thaps11242;rank=1 chr19a_19 . exon 548460 549122 . - . ID=Thaps11242.1;Parent=Thaps11242;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 549578 551335 . + . ID=Thaps11243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDG6];external_name=Thaps11243;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 549578 551335 . + . ID=Thaps11243;Parent=Thaps11243;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 549578 551335 . + 0 ID=Thaps11243;Parent=Thaps11243;rank=1 chr19a_19 . exon 549578 551335 . + . ID=Thaps11243.1;Parent=Thaps11243;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 553412 555412 . - . ID=Thaps11244;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDG7];external_name=Thaps11244;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 553412 555412 . - . ID=Thaps11244;Parent=Thaps11244;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 553412 553578 . - 0 ID=Thaps11244;Parent=Thaps11244;rank=7 chr19a_19 . exon 553412 553578 . - . ID=Thaps11244.7;Parent=Thaps11244;constitutive=1;ensembl_end_phase=2;rank=7 chr19a_19 . CDS 553676 553736 . - 0 ID=Thaps11244;Parent=Thaps11244;rank=6 chr19a_19 . exon 553676 553736 . - . ID=Thaps11244.6;Parent=Thaps11244;constitutive=1;ensembl_end_phase=1;rank=6 chr19a_19 . CDS 553852 553917 . - 0 ID=Thaps11244;Parent=Thaps11244;rank=5 chr19a_19 . exon 553852 553917 . - . ID=Thaps11244.5;Parent=Thaps11244;constitutive=1;rank=5 chr19a_19 . CDS 554054 554080 . - 0 ID=Thaps11244;Parent=Thaps11244;rank=4 chr19a_19 . exon 554054 554080 . - . ID=Thaps11244.4;Parent=Thaps11244;constitutive=1;rank=4 chr19a_19 . CDS 554225 554320 . - 0 ID=Thaps11244;Parent=Thaps11244;rank=3 chr19a_19 . exon 554225 554320 . - . ID=Thaps11244.3;Parent=Thaps11244;constitutive=1;rank=3 chr19a_19 . CDS 554483 554798 . - 0 ID=Thaps11244;Parent=Thaps11244;rank=2 chr19a_19 . exon 554483 554798 . - . ID=Thaps11244.2;Parent=Thaps11244;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . CDS 555312 555412 . - 0 ID=Thaps11244;Parent=Thaps11244;rank=1 chr19a_19 . exon 555312 555412 . - . ID=Thaps11244.1;Parent=Thaps11244;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 555805 560456 . - . ID=Thaps25496;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDG8];external_name=Thaps25496;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 555805 560456 . - . ID=Thaps25496;Parent=Thaps25496;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 555805 557015 . - 0 ID=Thaps25496;Parent=Thaps25496;rank=7 chr19a_19 . exon 555805 557015 . - . ID=Thaps25496.7;Parent=Thaps25496;constitutive=1;ensembl_end_phase=2;rank=7 chr19a_19 . CDS 557102 557972 . - 0 ID=Thaps25496;Parent=Thaps25496;rank=6 chr19a_19 . exon 557102 557972 . - . ID=Thaps25496.6;Parent=Thaps25496;constitutive=1;ensembl_end_phase=1;rank=6 chr19a_19 . CDS 558025 558092 . - 0 ID=Thaps25496;Parent=Thaps25496;rank=5 chr19a_19 . CDS 558253 558372 . - 0 ID=Thaps25496;Parent=Thaps25496;rank=4 chr19a_19 . CDS 558671 559022 . - 0 ID=Thaps25496;Parent=Thaps25496;rank=3 chr19a_19 . CDS 559180 559919 . - 0 ID=Thaps25496;Parent=Thaps25496;rank=2 chr19a_19 . CDS 560036 560456 . - 0 ID=Thaps25496;Parent=Thaps25496;rank=1 chr19a_19 ensembl protein_coding_gene 565348 566738 . + . ID=Thaps11247;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDH1];external_name=Thaps11247;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 565348 566738 . + . ID=Thaps11247;Parent=Thaps11247;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 565348 565535 . + 0 ID=Thaps11247;Parent=Thaps11247;rank=1 chr19a_19 . exon 565348 565535 . + . ID=Thaps11247.1;Parent=Thaps11247;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 . CDS 565667 566738 . + 0 ID=Thaps11247;Parent=Thaps11247;rank=2 chr19a_19 . exon 565667 566738 . + . ID=Thaps11247.2;Parent=Thaps11247;constitutive=1;ensembl_end_phase=1;rank=2 chr19a_19 . exon 558025 558092 . - . ID=Thaps25496.5;Parent=Thaps25496;constitutive=1;ensembl_end_phase=2;rank=5 chr19a_19 . exon 558253 558372 . - . ID=Thaps25496.4;Parent=Thaps25496;constitutive=1;rank=4 chr19a_19 . exon 558671 559022 . - . ID=Thaps25496.3;Parent=Thaps25496;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . exon 559180 559919 . - . ID=Thaps25496.2;Parent=Thaps25496;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . exon 560036 560456 . - . ID=Thaps25496.1;Parent=Thaps25496;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 563379 564699 . - . ID=Thaps269985;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDH0];external_name=Thaps269985;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 563379 564699 . - . ID=Thaps269985;Parent=Thaps269985;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 563379 563596 . - 0 ID=Thaps269985;Parent=Thaps269985;rank=3 chr19a_19 . exon 563379 563596 . - . ID=Thaps269985.3;Parent=Thaps269985;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 563651 564328 . - 0 ID=Thaps269985;Parent=Thaps269985;rank=2 chr19a_19 . exon 563651 564328 . - . ID=Thaps269985.2;Parent=Thaps269985;constitutive=1;rank=2 chr19a_19 . CDS 564630 564699 . - 0 ID=Thaps269985;Parent=Thaps269985;rank=1 chr19a_19 . exon 564630 564699 . - . ID=Thaps269985.1;Parent=Thaps269985;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 561727 563039 . - . ID=Thaps38272;biotype=protein_coding;description=Oxidase [Source:UniProtKB/TrEMBL%3BAcc:B8LDG9];external_name=Thaps38272;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 561727 563039 . - . ID=Thaps38272;Parent=Thaps38272;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 561727 562484 . - 0 ID=Thaps38272;Parent=Thaps38272;rank=2 chr19a_19 . exon 561727 562484 . - . ID=Thaps38272.2;Parent=Thaps38272;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 562586 563039 . - 0 ID=Thaps38272;Parent=Thaps38272;rank=1 chr19a_19 . exon 562586 563039 . - . ID=Thaps38272.1;Parent=Thaps38272;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . repeat_region 572120 572155 . ? . description=trf chr19a_19 ensembl protein_coding_gene 567628 575582 . - . ID=Thaps25498;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDH2];external_name=Thaps25498;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 567628 575582 . - . ID=Thaps25498;Parent=Thaps25498;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 567628 568697 . - 0 ID=Thaps25498;Parent=Thaps25498;rank=7 chr19a_19 . exon 567628 568697 . - . ID=Thaps25498.7;Parent=Thaps25498;constitutive=1;ensembl_end_phase=2;rank=7 chr19a_19 . CDS 568775 569195 . - 0 ID=Thaps25498;Parent=Thaps25498;rank=6 chr19a_19 . exon 568775 569195 . - . ID=Thaps25498.6;Parent=Thaps25498;constitutive=1;ensembl_end_phase=1;rank=6 chr19a_19 . CDS 569269 570400 . - 0 ID=Thaps25498;Parent=Thaps25498;rank=5 chr19a_19 . exon 569269 570400 . - . ID=Thaps25498.5;Parent=Thaps25498;constitutive=1;ensembl_end_phase=1;rank=5 chr19a_19 . CDS 570493 571538 . - 0 ID=Thaps25498;Parent=Thaps25498;rank=4 chr19a_19 . exon 570493 571538 . - . ID=Thaps25498.4;Parent=Thaps25498;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 571625 572082 . - 0 ID=Thaps25498;Parent=Thaps25498;rank=3 chr19a_19 . exon 571625 572082 . - . ID=Thaps25498.3;Parent=Thaps25498;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 572118 572186 . - 0 ID=Thaps25498;Parent=Thaps25498;rank=2 chr19a_19 . exon 572118 572186 . - . ID=Thaps25498.2;Parent=Thaps25498;constitutive=1;rank=2 chr19a_19 . CDS 572270 575582 . - 0 ID=Thaps25498;Parent=Thaps25498;rank=1 chr19a_19 . exon 572270 575582 . - . ID=Thaps25498.1;Parent=Thaps25498;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 586286 587764 . + . ID=Thaps11252;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDH6];external_name=Thaps11252;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 586286 587764 . + . ID=Thaps11252;Parent=Thaps11252;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 586286 587764 . + 0 ID=Thaps11252;Parent=Thaps11252;rank=1 chr19a_19 . exon 586286 587764 . + . ID=Thaps11252.1;Parent=Thaps11252;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 580132 583852 . + . ID=Thaps25499;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDH4];external_name=Thaps25499;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 580132 583852 . + . ID=Thaps25499;Parent=Thaps25499;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 580132 580216 . + 0 ID=Thaps25499;Parent=Thaps25499;rank=1 chr19a_19 . exon 580132 580216 . + . ID=Thaps25499.1;Parent=Thaps25499;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 580516 581439 . + 0 ID=Thaps25499;Parent=Thaps25499;rank=2 chr19a_19 . exon 580516 581439 . + . ID=Thaps25499.2;Parent=Thaps25499;constitutive=1;rank=2 chr19a_19 . CDS 581563 582398 . + 0 ID=Thaps25499;Parent=Thaps25499;rank=3 chr19a_19 . exon 581563 582398 . + . ID=Thaps25499.3;Parent=Thaps25499;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 582480 582821 . + 0 ID=Thaps25499;Parent=Thaps25499;rank=4 chr19a_19 . exon 582480 582821 . + . ID=Thaps25499.4;Parent=Thaps25499;constitutive=1;rank=4 chr19a_19 . CDS 582903 583106 . + 0 ID=Thaps25499;Parent=Thaps25499;rank=5 chr19a_19 . exon 582903 583106 . + . ID=Thaps25499.5;Parent=Thaps25499;constitutive=1;rank=5 chr19a_19 . CDS 583187 583457 . + 0 ID=Thaps25499;Parent=Thaps25499;rank=6 chr19a_19 . exon 583187 583457 . + . ID=Thaps25499.6;Parent=Thaps25499;constitutive=1;ensembl_end_phase=1;rank=6 chr19a_19 . CDS 583548 583852 . + 0 ID=Thaps25499;Parent=Thaps25499;rank=7 chr19a_19 . exon 583548 583852 . + . ID=Thaps25499.7;Parent=Thaps25499;constitutive=1;ensembl_end_phase=2;rank=7 chr19a_19 ensembl protein_coding_gene 578815 579590 . + . ID=Thaps264607;biotype=protein_coding;description=CAAX farnesyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8LDH3];external_name=Thaps264607;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 578815 579590 . + . ID=Thaps264607;Parent=Thaps264607;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 578815 579590 . + 0 ID=Thaps264607;Parent=Thaps264607;rank=1 chr19a_19 . exon 578815 579590 . + . ID=Thaps264607.1;Parent=Thaps264607;constitutive=1;ensembl_end_phase=2;rank=1 chr19a_19 ensembl protein_coding_gene 584300 585119 . - . ID=Thaps264608;biotype=protein_coding;description=Serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8LDH5];external_name=Thaps264608;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 584300 585119 . - . ID=Thaps264608;Parent=Thaps264608;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 584300 584463 . - 0 ID=Thaps264608;Parent=Thaps264608;rank=3 chr19a_19 . exon 584300 584463 . - . ID=Thaps264608.3;Parent=Thaps264608;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 . CDS 584537 584833 . - 0 ID=Thaps264608;Parent=Thaps264608;rank=2 chr19a_19 . exon 584537 584833 . - . ID=Thaps264608.2;Parent=Thaps264608;constitutive=1;rank=2 chr19a_19 . CDS 585020 585119 . - 0 ID=Thaps264608;Parent=Thaps264608;rank=1 chr19a_19 . exon 585020 585119 . - . ID=Thaps264608.1;Parent=Thaps264608;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . repeat_region 589075 589558 . ? . description=dust chr19a_19 . repeat_region 589560 589681 . + . description=Gypsy1I_TP chr19a_19 . repeat_region 589682 590061 . + . description=Gypsy1I_TP chr19a_19 . repeat_region 590062 590133 . + . description=Gypsy1ALTR_TP chr19a_19 . repeat_region 590234 590568 . ? . description=trf chr19a_19 . repeat_region 592538 592636 . ? . description=trf chr19a_19 . repeat_region 594076 594129 . ? . description=dust chr19a_19 . repeat_region 594110 594129 . ? . description=trf chr19a_19 . repeat_region 594592 595169 . ? . description=trf chr19a_19 . repeat_region 595184 595250 . + . description=Gypsy1ALTR_TP chr19a_19 . repeat_region 595390 596834 . ? . description=trf chr19a_19 . repeat_region 595390 596834 . ? . description=trf chr19a_19 . repeat_region 596965 597312 . + . description=Copia5LTR_TP chr19a_19 ensembl protein_coding_gene 587902 588741 . - . ID=Thaps11253;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDH7];external_name=Thaps11253;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 587902 588741 . - . ID=Thaps11253;Parent=Thaps11253;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 587902 588741 . - 0 ID=Thaps11253;Parent=Thaps11253;rank=1 chr19a_19 . exon 587902 588741 . - . ID=Thaps11253.1;Parent=Thaps11253;constitutive=1;rank=1 chr19a_19 ensembl protein_coding_gene 590940 592417 . + . ID=Thaps11254;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDH8];external_name=Thaps11254;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 590940 592417 . + . ID=Thaps11254;Parent=Thaps11254;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 590940 591078 . + 0 ID=Thaps11254;Parent=Thaps11254;rank=1 chr19a_19 . exon 590940 591078 . + . ID=Thaps11254.1;Parent=Thaps11254;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 . CDS 591114 591842 . + 0 ID=Thaps11254;Parent=Thaps11254;rank=2 chr19a_19 . exon 591114 591842 . + . ID=Thaps11254.2;Parent=Thaps11254;constitutive=1;rank=2 chr19a_19 . CDS 591870 592417 . + 0 ID=Thaps11254;Parent=Thaps11254;rank=3 chr19a_19 . exon 591870 592417 . + . ID=Thaps11254.3;Parent=Thaps11254;constitutive=1;ensembl_end_phase=2;rank=3 chr19a_19 ensembl protein_coding_gene 595278 596257 . + . ID=Thaps11255;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDH9];external_name=Thaps11255;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 595278 596257 . + . ID=Thaps11255;Parent=Thaps11255;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 595278 595394 . + 0 ID=Thaps11255;Parent=Thaps11255;rank=1 chr19a_19 . exon 595278 595394 . + . ID=Thaps11255.1;Parent=Thaps11255;constitutive=1;rank=1 chr19a_19 . CDS 595497 595508 . + 0 ID=Thaps11255;Parent=Thaps11255;rank=2 chr19a_19 . exon 595497 595508 . + . ID=Thaps11255.2;Parent=Thaps11255;constitutive=1;rank=2 chr19a_19 . CDS 595611 595622 . + 0 ID=Thaps11255;Parent=Thaps11255;rank=3 chr19a_19 . exon 595611 595622 . + . ID=Thaps11255.3;Parent=Thaps11255;constitutive=1;rank=3 chr19a_19 . CDS 595681 595739 . + 0 ID=Thaps11255;Parent=Thaps11255;rank=4 chr19a_19 . exon 595681 595739 . + . ID=Thaps11255.4;Parent=Thaps11255;constitutive=1;ensembl_end_phase=2;rank=4 chr19a_19 . CDS 595798 595853 . + 0 ID=Thaps11255;Parent=Thaps11255;rank=5 chr19a_19 . exon 595798 595853 . + . ID=Thaps11255.5;Parent=Thaps11255;constitutive=1;ensembl_end_phase=2;rank=5 chr19a_19 . CDS 595956 595970 . + 0 ID=Thaps11255;Parent=Thaps11255;rank=6 chr19a_19 . exon 595956 595970 . + . ID=Thaps11255.6;Parent=Thaps11255;constitutive=1;rank=6 chr19a_19 . CDS 596017 596084 . + 0 ID=Thaps11255;Parent=Thaps11255;rank=7 chr19a_19 . exon 596017 596084 . + . ID=Thaps11255.7;Parent=Thaps11255;constitutive=1;ensembl_end_phase=2;rank=7 chr19a_19 . CDS 596210 596257 . + 0 ID=Thaps11255;Parent=Thaps11255;rank=8 chr19a_19 . exon 596210 596257 . + . ID=Thaps11255.8;Parent=Thaps11255;constitutive=1;rank=8 chr19a_19 . repeat_region 597314 598498 . + . description=Copia5I_TP chr19a_19 . repeat_region 603013 603626 . + . description=Gypsy3LTR_TP chr19a_19 . repeat_region 603627 603688 . + . description=Gypsy3I_TP chr19a_19 . repeat_region 603670 605340 . - . description=Copia5I_TP chr19a_19 ensembl protein_coding_gene 599003 599761 . - . ID=Thaps11256;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDI0];external_name=Thaps11256;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 599003 599761 . - . ID=Thaps11256;Parent=Thaps11256;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 599003 599331 . - 0 ID=Thaps11256;Parent=Thaps11256;rank=2 chr19a_19 . exon 599003 599331 . - . ID=Thaps11256.2;Parent=Thaps11256;constitutive=1;ensembl_end_phase=2;rank=2 chr19a_19 . CDS 599434 599761 . - 0 ID=Thaps11256;Parent=Thaps11256;rank=1 chr19a_19 . exon 599434 599761 . - . ID=Thaps11256.1;Parent=Thaps11256;constitutive=1;ensembl_end_phase=1;rank=1 chr19a_19 ensembl protein_coding_gene 600461 601914 . - . ID=Thaps821;biotype=protein_coding;description=Vacuolar protein sorting-associated protein [Source:UniProtKB/TrEMBL%3BAcc:B8LDI1];external_name=VPS4;logic_name=jgi_thaps3 chr19a_19 ensembl transcript 600461 601914 . - . ID=Thaps821;Parent=Thaps821;biotype=protein_coding;logic_name=jgi_thaps3 chr19a_19 . CDS 600461 600623 . - 0 ID=Thaps821;Parent=Thaps821;rank=3 chr19a_19 . exon 600461 600623 . - . ID=Thaps821.3;Parent=Thaps821;constitutive=1;ensembl_end_phase=1;rank=3 chr19a_19 . CDS 600708 601310 . - 0 ID=Thaps821;Parent=Thaps821;rank=2 chr19a_19 . exon 600708 601310 . - . ID=Thaps821.2;Parent=Thaps821;constitutive=1;rank=2 chr19a_19 . CDS 601409 601914 . - 0 ID=Thaps821;Parent=Thaps821;rank=1 chr19a_19 . exon 601409 601914 . - . ID=Thaps821.1;Parent=Thaps821;constitutive=1;ensembl_end_phase=2;rank=1 ##gff-version 3 ##sequence-region 17 1 659924 chr17 . repeat_region 1 442 . ? . description=dust chr17 . repeat_region 1 443 . ? . description=trf chr17 ensembl protein_coding_gene 3002 3475 . - . ID=Thaps10539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDT9];external_name=Thaps10539;logic_name=jgi_thaps3 chr17 ensembl transcript 3002 3475 . - . ID=Thaps10539;Parent=Thaps10539;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 3002 3475 . - 0 ID=Thaps10539;Parent=Thaps10539;rank=1 chr17 . exon 3002 3475 . - . ID=Thaps10539.1;Parent=Thaps10539;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 4246 4926 . - . ID=Thaps269889;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDU0];external_name=Thaps269889;logic_name=jgi_thaps3 chr17 ensembl transcript 4246 4926 . - . ID=Thaps269889;Parent=Thaps269889;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 4246 4438 . - 0 ID=Thaps269889;Parent=Thaps269889;rank=2 chr17 . exon 4246 4438 . - . ID=Thaps269889.2;Parent=Thaps269889;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 4535 4926 . - 0 ID=Thaps269889;Parent=Thaps269889;rank=1 chr17 . exon 4535 4926 . - . ID=Thaps269889.1;Parent=Thaps269889;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 7250 10819 . - . ID=Thaps37960;biotype=protein_coding;description=Myosin heavy chain-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDU1];external_name=MYO5;logic_name=jgi_thaps3 chr17 ensembl transcript 7250 10819 . - . ID=Thaps37960;Parent=Thaps37960;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 7250 7622 . - 0 ID=Thaps37960;Parent=Thaps37960;rank=7 chr17 . exon 7250 7622 . - . ID=Thaps37960.7;Parent=Thaps37960;constitutive=1;ensembl_end_phase=1;rank=7 chr17 . CDS 7974 8350 . - 0 ID=Thaps37960;Parent=Thaps37960;rank=6 chr17 . exon 7974 8350 . - . ID=Thaps37960.6;Parent=Thaps37960;constitutive=1;ensembl_end_phase=2;rank=6 chr17 . CDS 8433 9323 . - 0 ID=Thaps37960;Parent=Thaps37960;rank=5 chr17 . exon 8433 9323 . - . ID=Thaps37960.5;Parent=Thaps37960;constitutive=1;rank=5 chr17 . CDS 9400 9816 . - 0 ID=Thaps37960;Parent=Thaps37960;rank=4 chr17 . exon 9400 9816 . - . ID=Thaps37960.4;Parent=Thaps37960;constitutive=1;rank=4 chr17 . CDS 10002 10120 . - 0 ID=Thaps37960;Parent=Thaps37960;rank=3 chr17 . CDS 10344 10388 . - 0 ID=Thaps37960;Parent=Thaps37960;rank=2 chr17 . CDS 10612 10819 . - 0 ID=Thaps37960;Parent=Thaps37960;rank=1 chr17 ensembl protein_coding_gene 1097 2337 . + . ID=Thaps37976;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8CDT8];external_name=Thaps37976;logic_name=jgi_thaps3 chr17 ensembl transcript 1097 2337 . + . ID=Thaps37976;Parent=Thaps37976;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 1097 1217 . + 0 ID=Thaps37976;Parent=Thaps37976;rank=1 chr17 . exon 1097 1217 . + . ID=Thaps37976.1;Parent=Thaps37976;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 1318 1407 . + 0 ID=Thaps37976;Parent=Thaps37976;rank=2 chr17 . exon 1318 1407 . + . ID=Thaps37976.2;Parent=Thaps37976;constitutive=1;rank=2 chr17 . CDS 1671 1736 . + 0 ID=Thaps37976;Parent=Thaps37976;rank=3 chr17 . exon 1671 1736 . + . ID=Thaps37976.3;Parent=Thaps37976;constitutive=1;rank=3 chr17 . CDS 1890 1919 . + 0 ID=Thaps37976;Parent=Thaps37976;rank=4 chr17 . exon 1890 1919 . + . ID=Thaps37976.4;Parent=Thaps37976;constitutive=1;rank=4 chr17 . CDS 2041 2063 . + 0 ID=Thaps37976;Parent=Thaps37976;rank=5 chr17 . exon 2041 2063 . + . ID=Thaps37976.5;Parent=Thaps37976;constitutive=1;ensembl_end_phase=2;rank=5 chr17 . CDS 2176 2337 . + 0 ID=Thaps37976;Parent=Thaps37976;rank=6 chr17 . exon 2176 2337 . + . ID=Thaps37976.6;Parent=Thaps37976;constitutive=1;rank=6 chr17 ensembl protein_coding_gene 12155 14844 . + . ID=Thaps10541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDU2];external_name=Thaps10541;logic_name=jgi_thaps3 chr17 ensembl transcript 12155 14844 . + . ID=Thaps10541;Parent=Thaps10541;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 12155 12993 . + 0 ID=Thaps10541;Parent=Thaps10541;rank=1 chr17 . exon 12155 12993 . + . ID=Thaps10541.1;Parent=Thaps10541;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 13116 13578 . + 0 ID=Thaps10541;Parent=Thaps10541;rank=2 chr17 . exon 13116 13578 . + . ID=Thaps10541.2;Parent=Thaps10541;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 13667 13914 . + 0 ID=Thaps10541;Parent=Thaps10541;rank=3 chr17 . exon 13667 13914 . + . ID=Thaps10541.3;Parent=Thaps10541;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 13975 14036 . + 0 ID=Thaps10541;Parent=Thaps10541;rank=4 chr17 . exon 13975 14036 . + . ID=Thaps10541.4;Parent=Thaps10541;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 14173 14249 . + 0 ID=Thaps10541;Parent=Thaps10541;rank=5 chr17 . exon 14173 14249 . + . ID=Thaps10541.5;Parent=Thaps10541;constitutive=1;ensembl_end_phase=2;rank=5 chr17 . CDS 14695 14844 . + 0 ID=Thaps10541;Parent=Thaps10541;rank=6 chr17 . exon 14695 14844 . + . ID=Thaps10541.6;Parent=Thaps10541;constitutive=1;rank=6 chr17 ensembl protein_coding_gene 15076 15549 . + . ID=Thaps10542;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDU3];external_name=Thaps10542;logic_name=jgi_thaps3 chr17 ensembl transcript 15076 15549 . + . ID=Thaps10542;Parent=Thaps10542;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 15076 15549 . + 0 ID=Thaps10542;Parent=Thaps10542;rank=1 chr17 . exon 15076 15549 . + . ID=Thaps10542.1;Parent=Thaps10542;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 15961 19267 . - . ID=Thaps25198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDU4];external_name=Thaps25198;logic_name=jgi_thaps3 chr17 ensembl transcript 15961 19267 . - . ID=Thaps25198;Parent=Thaps25198;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 15961 16041 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=10 chr17 . exon 15961 16041 . - . ID=Thaps25198.10;Parent=Thaps25198;constitutive=1;rank=10 chr17 . CDS 16123 16267 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=9 chr17 . exon 16123 16267 . - . ID=Thaps25198.9;Parent=Thaps25198;constitutive=1;ensembl_end_phase=1;rank=9 chr17 . CDS 16352 16440 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=8 chr17 . exon 16352 16440 . - . ID=Thaps25198.8;Parent=Thaps25198;constitutive=1;ensembl_end_phase=2;rank=8 chr17 . CDS 16524 16548 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=7 chr17 . exon 16524 16548 . - . ID=Thaps25198.7;Parent=Thaps25198;constitutive=1;ensembl_end_phase=1;rank=7 chr17 . CDS 16648 16727 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=6 chr17 . exon 16648 16727 . - . ID=Thaps25198.6;Parent=Thaps25198;constitutive=1;ensembl_end_phase=2;rank=6 chr17 . CDS 16800 16905 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=5 chr17 . exon 16800 16905 . - . ID=Thaps25198.5;Parent=Thaps25198;constitutive=1;ensembl_end_phase=1;rank=5 chr17 . CDS 16996 17181 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=4 chr17 . exon 16996 17181 . - . ID=Thaps25198.4;Parent=Thaps25198;constitutive=1;rank=4 chr17 . CDS 17262 17303 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=3 chr17 . exon 17262 17303 . - . ID=Thaps25198.3;Parent=Thaps25198;constitutive=1;rank=3 chr17 . CDS 17368 18766 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=2 chr17 . exon 17368 18766 . - . ID=Thaps25198.2;Parent=Thaps25198;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 19072 19267 . - 0 ID=Thaps25198;Parent=Thaps25198;rank=1 chr17 . exon 19072 19267 . - . ID=Thaps25198.1;Parent=Thaps25198;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . exon 10002 10120 . - . ID=Thaps37960.3;Parent=Thaps37960;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . exon 10344 10388 . - . ID=Thaps37960.2;Parent=Thaps37960;constitutive=1;rank=2 chr17 . exon 10612 10819 . - . ID=Thaps37960.1;Parent=Thaps37960;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . repeat_region 22543 22568 . ? . description=dust chr17 . repeat_region 23142 23167 . ? . description=trf chr17 . repeat_region 23142 23167 . ? . description=dust chr17 . repeat_region 26366 26393 . ? . description=trf chr17 . repeat_region 26524 26773 . - . description=TE2c_TP chr17 . repeat_region 26547 26554 . ? . description=dust chr17 . repeat_region 26786 27092 . - . description=Harbinger2N_TP chr17 . repeat_region 26844 26965 . ? . description=dust chr17 . repeat_region 26846 26955 . ? . description=trf chr17 . repeat_region 26853 26955 . ? . description=trf chr17 . repeat_region 26917 27072 . ? . description=trf chr17 . repeat_region 26973 27091 . ? . description=dust chr17 . repeat_region 27010 27095 . ? . description=trf chr17 . repeat_region 27055 27083 . ? . description=trf chr17 ensembl protein_coding_gene 23705 26505 . + . ID=Thaps10545;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDU6];external_name=Thaps10545;logic_name=jgi_thaps3 chr17 ensembl transcript 23705 26505 . + . ID=Thaps10545;Parent=Thaps10545;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 23705 23840 . + 0 ID=Thaps10545;Parent=Thaps10545;rank=1 chr17 . exon 23705 23840 . + . ID=Thaps10545.1;Parent=Thaps10545;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 23901 25849 . + 0 ID=Thaps10545;Parent=Thaps10545;rank=2 chr17 . exon 23901 25849 . + . ID=Thaps10545.2;Parent=Thaps10545;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 26026 26339 . + 0 ID=Thaps10545;Parent=Thaps10545;rank=3 chr17 . exon 26026 26339 . + . ID=Thaps10545.3;Parent=Thaps10545;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 26421 26505 . + 0 ID=Thaps10545;Parent=Thaps10545;rank=4 chr17 . exon 26421 26505 . + . ID=Thaps10545.4;Parent=Thaps10545;constitutive=1;ensembl_end_phase=1;rank=4 chr17 ensembl protein_coding_gene 20317 23220 . - . ID=Thaps25199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDU5];external_name=Thaps25199;logic_name=jgi_thaps3 chr17 ensembl transcript 20317 23220 . - . ID=Thaps25199;Parent=Thaps25199;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 20317 20555 . - 0 ID=Thaps25199;Parent=Thaps25199;rank=6 chr17 . exon 20317 20555 . - . ID=Thaps25199.6;Parent=Thaps25199;constitutive=1;ensembl_end_phase=2;rank=6 chr17 . CDS 20917 21409 . - 0 ID=Thaps25199;Parent=Thaps25199;rank=5 chr17 . exon 20917 21409 . - . ID=Thaps25199.5;Parent=Thaps25199;constitutive=1;ensembl_end_phase=1;rank=5 chr17 . CDS 21511 22137 . - 0 ID=Thaps25199;Parent=Thaps25199;rank=4 chr17 . exon 21511 22137 . - . ID=Thaps25199.4;Parent=Thaps25199;constitutive=1;rank=4 chr17 . CDS 22241 22421 . - 0 ID=Thaps25199;Parent=Thaps25199;rank=3 chr17 . exon 22241 22421 . - . ID=Thaps25199.3;Parent=Thaps25199;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 22671 22737 . - 0 ID=Thaps25199;Parent=Thaps25199;rank=2 chr17 . exon 22671 22737 . - . ID=Thaps25199.2;Parent=Thaps25199;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 22869 23220 . - 0 ID=Thaps25199;Parent=Thaps25199;rank=1 chr17 . exon 22869 23220 . - . ID=Thaps25199.1;Parent=Thaps25199;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 31712 33511 . - . ID=Thaps10547;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDU8];external_name=Thaps10547;logic_name=jgi_thaps3 chr17 ensembl transcript 31712 33511 . - . ID=Thaps10547;Parent=Thaps10547;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 31712 31753 . - 0 ID=Thaps10547;Parent=Thaps10547;rank=4 chr17 . exon 31712 31753 . - . ID=Thaps10547.4;Parent=Thaps10547;constitutive=1;rank=4 chr17 . CDS 31780 32952 . - 0 ID=Thaps10547;Parent=Thaps10547;rank=3 chr17 . exon 31780 32952 . - . ID=Thaps10547.3;Parent=Thaps10547;constitutive=1;rank=3 chr17 . CDS 33194 33239 . - 0 ID=Thaps10547;Parent=Thaps10547;rank=2 chr17 . exon 33194 33239 . - . ID=Thaps10547.2;Parent=Thaps10547;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 33414 33511 . - 0 ID=Thaps10547;Parent=Thaps10547;rank=1 chr17 . exon 33414 33511 . - . ID=Thaps10547.1;Parent=Thaps10547;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 35248 35808 . + . ID=Thaps10548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDU9];external_name=Thaps10548;logic_name=jgi_thaps3 chr17 ensembl transcript 35248 35808 . + . ID=Thaps10548;Parent=Thaps10548;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 35248 35808 . + 0 ID=Thaps10548;Parent=Thaps10548;rank=1 chr17 . exon 35248 35808 . + . ID=Thaps10548.1;Parent=Thaps10548;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 30528 31326 . + . ID=Thaps264407;biotype=protein_coding;description=Indole-3-glycerol-phosphate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CDU7];external_name=Thaps264407;logic_name=jgi_thaps3 chr17 ensembl transcript 30528 31326 . + . ID=Thaps264407;Parent=Thaps264407;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 30528 30761 . + 0 ID=Thaps264407;Parent=Thaps264407;rank=1 chr17 . exon 30528 30761 . + . ID=Thaps264407.1;Parent=Thaps264407;constitutive=1;rank=1 chr17 . CDS 30839 31326 . + 0 ID=Thaps264407;Parent=Thaps264407;rank=2 chr17 . exon 30839 31326 . + . ID=Thaps264407.2;Parent=Thaps264407;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . repeat_region 43796 43950 . + . description=Harbinger1_TP chr17 ensembl protein_coding_gene 40766 43252 . + . ID=Thaps10550;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV0];external_name=Thaps10550;logic_name=jgi_thaps3 chr17 ensembl transcript 40766 43252 . + . ID=Thaps10550;Parent=Thaps10550;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 40766 43252 . + 0 ID=Thaps10550;Parent=Thaps10550;rank=1 chr17 . exon 40766 43252 . + . ID=Thaps10550.1;Parent=Thaps10550;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 46238 47424 . + . ID=Thaps10551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV1];external_name=Thaps10551;logic_name=jgi_thaps3 chr17 ensembl transcript 46238 47424 . + . ID=Thaps10551;Parent=Thaps10551;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 46238 46466 . + 0 ID=Thaps10551;Parent=Thaps10551;rank=1 chr17 . exon 46238 46466 . + . ID=Thaps10551.1;Parent=Thaps10551;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 46625 47424 . + 0 ID=Thaps10551;Parent=Thaps10551;rank=2 chr17 . exon 46625 47424 . + . ID=Thaps10551.2;Parent=Thaps10551;constitutive=1;ensembl_end_phase=2;rank=2 chr17 ensembl protein_coding_gene 47740 50740 . - . ID=Thaps10552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV2];external_name=Thaps10552;logic_name=jgi_thaps3 chr17 ensembl transcript 47740 50740 . - . ID=Thaps10552;Parent=Thaps10552;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 47740 49841 . - 0 ID=Thaps10552;Parent=Thaps10552;rank=3 chr17 . exon 47740 49841 . - . ID=Thaps10552.3;Parent=Thaps10552;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 49960 50010 . - 0 ID=Thaps10552;Parent=Thaps10552;rank=2 chr17 . exon 49960 50010 . - . ID=Thaps10552.2;Parent=Thaps10552;constitutive=1;rank=2 chr17 . CDS 50110 50740 . - 0 ID=Thaps10552;Parent=Thaps10552;rank=1 chr17 . repeat_region 50081 50118 . ? . description=trf chr17 . repeat_region 54814 54841 . ? . description=dust chr17 . repeat_region 57398 57416 . ? . description=dust chr17 . exon 50110 50740 . - . ID=Thaps10552.1;Parent=Thaps10552;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 52721 55488 . - . ID=Thaps10554;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV4];external_name=Thaps10554;logic_name=jgi_thaps3 chr17 ensembl transcript 52721 55488 . - . ID=Thaps10554;Parent=Thaps10554;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 52721 52784 . - 0 ID=Thaps10554;Parent=Thaps10554;rank=3 chr17 . exon 52721 52784 . - . ID=Thaps10554.3;Parent=Thaps10554;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 52804 53850 . - 0 ID=Thaps10554;Parent=Thaps10554;rank=2 chr17 . exon 52804 53850 . - . ID=Thaps10554.2;Parent=Thaps10554;constitutive=1;rank=2 chr17 . CDS 53924 55488 . - 0 ID=Thaps10554;Parent=Thaps10554;rank=1 chr17 . exon 53924 55488 . - . ID=Thaps10554.1;Parent=Thaps10554;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 58475 59798 . - . ID=Thaps10556;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV6];external_name=Thaps10556;logic_name=jgi_thaps3 chr17 ensembl transcript 58475 59798 . - . ID=Thaps10556;Parent=Thaps10556;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 58475 59353 . - 0 ID=Thaps10556;Parent=Thaps10556;rank=3 chr17 . exon 58475 59353 . - . ID=Thaps10556.3;Parent=Thaps10556;constitutive=1;rank=3 chr17 . CDS 59482 59501 . - 0 ID=Thaps10556;Parent=Thaps10556;rank=2 chr17 . exon 59482 59501 . - . ID=Thaps10556.2;Parent=Thaps10556;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 59585 59798 . - 0 ID=Thaps10556;Parent=Thaps10556;rank=1 chr17 . exon 59585 59798 . - . ID=Thaps10556.1;Parent=Thaps10556;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 51918 52616 . + . ID=Thaps25202;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV3];external_name=Thaps25202;logic_name=jgi_thaps3 chr17 ensembl transcript 51918 52616 . + . ID=Thaps25202;Parent=Thaps25202;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 51918 52616 . + 0 ID=Thaps25202;Parent=Thaps25202;rank=1 chr17 . exon 51918 52616 . + . ID=Thaps25202.1;Parent=Thaps25202;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 56447 58141 . + . ID=Thaps25203;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV5];external_name=Thaps25203;logic_name=jgi_thaps3 chr17 ensembl transcript 56447 58141 . + . ID=Thaps25203;Parent=Thaps25203;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 56447 56942 . + 0 ID=Thaps25203;Parent=Thaps25203;rank=1 chr17 . exon 56447 56942 . + . ID=Thaps25203.1;Parent=Thaps25203;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 57130 57251 . + 0 ID=Thaps25203;Parent=Thaps25203;rank=2 chr17 . exon 57130 57251 . + . ID=Thaps25203.2;Parent=Thaps25203;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 57422 58141 . + 0 ID=Thaps25203;Parent=Thaps25203;rank=3 chr17 . exon 57422 58141 . + . ID=Thaps25203.3;Parent=Thaps25203;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 63719 64902 . - . ID=Thaps10558;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV8];external_name=Thaps10558;logic_name=jgi_thaps3 chr17 ensembl transcript 63719 64902 . - . ID=Thaps10558;Parent=Thaps10558;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 63719 64518 . - 0 ID=Thaps10558;Parent=Thaps10558;rank=2 chr17 . exon 63719 64518 . - . ID=Thaps10558.2;Parent=Thaps10558;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 64674 64902 . - 0 ID=Thaps10558;Parent=Thaps10558;rank=1 chr17 . exon 64674 64902 . - . ID=Thaps10558.1;Parent=Thaps10558;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 66261 67361 . + . ID=Thaps10559;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV9];external_name=Thaps10559;logic_name=jgi_thaps3 chr17 ensembl transcript 66261 67361 . + . ID=Thaps10559;Parent=Thaps10559;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 66261 66485 . + 0 ID=Thaps10559;Parent=Thaps10559;rank=1 chr17 . exon 66261 66485 . + . ID=Thaps10559.1;Parent=Thaps10559;constitutive=1;rank=1 chr17 . CDS 66783 67361 . + 0 ID=Thaps10559;Parent=Thaps10559;rank=2 chr17 . exon 66783 67361 . + . ID=Thaps10559.2;Parent=Thaps10559;constitutive=1;rank=2 chr17 ensembl protein_coding_gene 67869 69071 . - . ID=Thaps10560;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDW0];external_name=Thaps10560;logic_name=jgi_thaps3 chr17 ensembl transcript 67869 69071 . - . ID=Thaps10560;Parent=Thaps10560;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 67869 68407 . - 0 ID=Thaps10560;Parent=Thaps10560;rank=2 chr17 . exon 67869 68407 . - . ID=Thaps10560.2;Parent=Thaps10560;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 68678 69071 . - 0 ID=Thaps10560;Parent=Thaps10560;rank=1 chr17 . exon 68678 69071 . - . ID=Thaps10560.1;Parent=Thaps10560;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 60382 63403 . + . ID=Thaps25205;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDV7];external_name=Thaps25205;logic_name=jgi_thaps3 chr17 ensembl transcript 60382 63403 . + . ID=Thaps25205;Parent=Thaps25205;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 60382 61027 . + 0 ID=Thaps25205;Parent=Thaps25205;rank=1 chr17 . exon 60382 61027 . + . ID=Thaps25205.1;Parent=Thaps25205;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 61127 61177 . + 0 ID=Thaps25205;Parent=Thaps25205;rank=2 chr17 . exon 61127 61177 . + . ID=Thaps25205.2;Parent=Thaps25205;constitutive=1;rank=2 chr17 . CDS 61296 63403 . + 0 ID=Thaps25205;Parent=Thaps25205;rank=3 chr17 . exon 61296 63403 . + . ID=Thaps25205.3;Parent=Thaps25205;constitutive=1;ensembl_end_phase=2;rank=3 chr17 ensembl protein_coding_gene 69928 71957 . + . ID=Thaps264410;biotype=protein_coding;description=Transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CDW1];external_name=Thaps264410;logic_name=jgi_thaps3 chr17 ensembl transcript 69928 71957 . + . ID=Thaps264410;Parent=Thaps264410;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 69928 70807 . + 0 ID=Thaps264410;Parent=Thaps264410;rank=1 chr17 . exon 69928 70807 . + . ID=Thaps264410.1;Parent=Thaps264410;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 71105 71199 . + 0 ID=Thaps264410;Parent=Thaps264410;rank=2 chr17 . CDS 71282 71957 . + 0 ID=Thaps264410;Parent=Thaps264410;rank=3 chr17 . repeat_region 73110 73156 . ? . description=trf chr17 . repeat_region 73115 73172 . ? . description=trf chr17 . repeat_region 76853 76959 . ? . description=dust chr17 ensembl protein_coding_gene 77998 80211 . - . ID=Thaps10564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDW4];external_name=Thaps10564;logic_name=jgi_thaps3 chr17 ensembl transcript 77998 80211 . - . ID=Thaps10564;Parent=Thaps10564;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 77998 78332 . - 0 ID=Thaps10564;Parent=Thaps10564;rank=2 chr17 . exon 77998 78332 . - . ID=Thaps10564.2;Parent=Thaps10564;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 78384 80211 . - 0 ID=Thaps10564;Parent=Thaps10564;rank=1 chr17 . exon 78384 80211 . - . ID=Thaps10564.1;Parent=Thaps10564;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 72061 73110 . - . ID=Thaps25206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDW2];external_name=Thaps25206;logic_name=jgi_thaps3 chr17 ensembl transcript 72061 73110 . - . ID=Thaps25206;Parent=Thaps25206;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 72061 72727 . - 0 ID=Thaps25206;Parent=Thaps25206;rank=2 chr17 . exon 72061 72727 . - . ID=Thaps25206.2;Parent=Thaps25206;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 72848 73110 . - 0 ID=Thaps25206;Parent=Thaps25206;rank=1 chr17 . exon 72848 73110 . - . ID=Thaps25206.1;Parent=Thaps25206;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 73429 75492 . + . ID=Thaps25207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDW3];external_name=Thaps25207;logic_name=jgi_thaps3 chr17 ensembl transcript 73429 75492 . + . ID=Thaps25207;Parent=Thaps25207;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 73429 75492 . + 0 ID=Thaps25207;Parent=Thaps25207;rank=1 chr17 . exon 73429 75492 . + . ID=Thaps25207.1;Parent=Thaps25207;constitutive=1;rank=1 chr17 . exon 71105 71199 . + . ID=Thaps264410.2;Parent=Thaps264410;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . exon 71282 71957 . + . ID=Thaps264410.3;Parent=Thaps264410;constitutive=1;ensembl_end_phase=1;rank=3 chr17 ensembl protein_coding_gene 85171 86532 . - . ID=Thaps10566;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDW7];external_name=Thaps10566;logic_name=jgi_thaps3 chr17 ensembl transcript 85171 86532 . - . ID=Thaps10566;Parent=Thaps10566;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 85171 86532 . - 0 ID=Thaps10566;Parent=Thaps10566;rank=1 chr17 . exon 85171 86532 . - . ID=Thaps10566.1;Parent=Thaps10566;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 87715 90896 . + . ID=Thaps10567;biotype=protein_coding;description=Glutamine fructose 6 phosphate transaminase [Source:UniProtKB/TrEMBL%3BAcc:B8CDW8];external_name=GFA_2;logic_name=jgi_thaps3 chr17 ensembl transcript 87715 90896 . + . ID=Thaps10567;Parent=Thaps10567;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 87715 88007 . + 0 ID=Thaps10567;Parent=Thaps10567;rank=1 chr17 . exon 87715 88007 . + . ID=Thaps10567.1;Parent=Thaps10567;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 88454 88544 . + 0 ID=Thaps10567;Parent=Thaps10567;rank=2 chr17 . exon 88454 88544 . + . ID=Thaps10567.2;Parent=Thaps10567;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 88701 89341 . + 0 ID=Thaps10567;Parent=Thaps10567;rank=3 chr17 . exon 88701 89341 . + . ID=Thaps10567.3;Parent=Thaps10567;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 89446 90125 . + 0 ID=Thaps10567;Parent=Thaps10567;rank=4 chr17 . exon 89446 90125 . + . ID=Thaps10567.4;Parent=Thaps10567;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 90210 90316 . + 0 ID=Thaps10567;Parent=Thaps10567;rank=5 chr17 . CDS 90394 90495 . + 0 ID=Thaps10567;Parent=Thaps10567;rank=6 chr17 . CDS 90565 90725 . + 0 ID=Thaps10567;Parent=Thaps10567;rank=7 chr17 . CDS 90854 90896 . + 0 ID=Thaps10567;Parent=Thaps10567;rank=8 chr17 ensembl protein_coding_gene 82863 83624 . - . ID=Thaps264413;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDW6];external_name=Thaps264413;logic_name=jgi_thaps3 chr17 ensembl transcript 82863 83624 . - . ID=Thaps264413;Parent=Thaps264413;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 82863 83150 . - 0 ID=Thaps264413;Parent=Thaps264413;rank=4 chr17 . exon 82863 83150 . - . ID=Thaps264413.4;Parent=Thaps264413;constitutive=1;rank=4 chr17 . CDS 83255 83311 . - 0 ID=Thaps264413;Parent=Thaps264413;rank=3 chr17 . exon 83255 83311 . - . ID=Thaps264413.3;Parent=Thaps264413;constitutive=1;rank=3 chr17 . CDS 83399 83464 . - 0 ID=Thaps264413;Parent=Thaps264413;rank=2 chr17 . exon 83399 83464 . - . ID=Thaps264413.2;Parent=Thaps264413;constitutive=1;rank=2 chr17 . CDS 83486 83624 . - 0 ID=Thaps264413;Parent=Thaps264413;rank=1 chr17 . exon 83486 83624 . - . ID=Thaps264413.1;Parent=Thaps264413;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 81667 82812 . + . ID=Thaps37979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDW5];external_name=Thaps37979;logic_name=jgi_thaps3 chr17 ensembl transcript 81667 82812 . + . ID=Thaps37979;Parent=Thaps37979;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 81667 81825 . + 0 ID=Thaps37979;Parent=Thaps37979;rank=1 chr17 . exon 81667 81825 . + . ID=Thaps37979.1;Parent=Thaps37979;constitutive=1;rank=1 chr17 . CDS 81883 82246 . + 0 ID=Thaps37979;Parent=Thaps37979;rank=2 chr17 . exon 81883 82246 . + . ID=Thaps37979.2;Parent=Thaps37979;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 82328 82498 . + 0 ID=Thaps37979;Parent=Thaps37979;rank=3 chr17 . exon 82328 82498 . + . ID=Thaps37979.3;Parent=Thaps37979;constitutive=1;rank=3 chr17 . CDS 82568 82812 . + 0 ID=Thaps37979;Parent=Thaps37979;rank=4 chr17 . exon 82568 82812 . + . ID=Thaps37979.4;Parent=Thaps37979;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . repeat_region 99649 99706 . ? . description=trf chr17 . exon 90210 90316 . + . ID=Thaps10567.5;Parent=Thaps10567;constitutive=1;ensembl_end_phase=2;rank=5 chr17 . exon 90394 90495 . + . ID=Thaps10567.6;Parent=Thaps10567;constitutive=1;rank=6 chr17 . exon 90565 90725 . + . ID=Thaps10567.7;Parent=Thaps10567;constitutive=1;ensembl_end_phase=2;rank=7 chr17 . exon 90854 90896 . + . ID=Thaps10567.8;Parent=Thaps10567;constitutive=1;ensembl_end_phase=1;rank=8 chr17 ensembl protein_coding_gene 94845 95084 . + . ID=Thaps20431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDX0];external_name=Thaps20431;logic_name=jgi_thaps3 chr17 ensembl transcript 94845 95084 . + . ID=Thaps20431;Parent=Thaps20431;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 94845 95084 . + 0 ID=Thaps20431;Parent=Thaps20431;rank=1 chr17 . exon 94845 95084 . + . ID=Thaps20431.1;Parent=Thaps20431;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 95739 98648 . + . ID=Thaps269893;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDX1];external_name=Thaps269893;logic_name=jgi_thaps3 chr17 ensembl transcript 95739 98648 . + . ID=Thaps269893;Parent=Thaps269893;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 95739 96162 . + 0 ID=Thaps269893;Parent=Thaps269893;rank=1 chr17 . exon 95739 96162 . + . ID=Thaps269893.1;Parent=Thaps269893;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 96242 97113 . + 0 ID=Thaps269893;Parent=Thaps269893;rank=2 chr17 . exon 96242 97113 . + . ID=Thaps269893.2;Parent=Thaps269893;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 97212 98648 . + 0 ID=Thaps269893;Parent=Thaps269893;rank=3 chr17 . exon 97212 98648 . + . ID=Thaps269893.3;Parent=Thaps269893;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 91082 92533 . - . ID=Thaps42620;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDW9];external_name=Thaps42620;logic_name=jgi_thaps3 chr17 ensembl transcript 91082 92533 . - . ID=Thaps42620;Parent=Thaps42620;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 91082 91326 . - 0 ID=Thaps42620;Parent=Thaps42620;rank=4 chr17 . exon 91082 91326 . - . ID=Thaps42620.4;Parent=Thaps42620;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 91396 91566 . - 0 ID=Thaps42620;Parent=Thaps42620;rank=3 chr17 . exon 91396 91566 . - . ID=Thaps42620.3;Parent=Thaps42620;constitutive=1;rank=3 chr17 . CDS 91648 92011 . - 0 ID=Thaps42620;Parent=Thaps42620;rank=2 chr17 . exon 91648 92011 . - . ID=Thaps42620.2;Parent=Thaps42620;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 92069 92533 . - 0 ID=Thaps42620;Parent=Thaps42620;rank=1 chr17 . exon 92069 92533 . - . ID=Thaps42620.1;Parent=Thaps42620;constitutive=1;rank=1 chr17 . repeat_region 105622 105630 . ? . description=dust chr17 . repeat_region 105815 105822 . ? . description=dust chr17 . repeat_region 107830 107837 . ? . description=dust chr17 ensembl tRNA_gene 104619 104691 . + . ID=EPrTPOG00000000035;biotype=tRNA;description=tRNA-Lys for anticodon UUU [Source:TRNASCAN_SE%3BAcc:tRNA-Lys];external_name=tRNA-Lys;logic_name=ncrna_eg chr17 ensembl transcript 104619 104691 . + . ID=EPrTPOT00000000034;Parent=EPrTPOG00000000035;biotype=tRNA;logic_name=ncrna_eg chr17 . exon 104619 104691 . + . ID=EPrTPOE00000000035;Parent=EPrTPOT00000000034;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 102923 104076 . + . ID=Thaps10571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDX3];external_name=Thaps10571;logic_name=jgi_thaps3 chr17 ensembl transcript 102923 104076 . + . ID=Thaps10571;Parent=Thaps10571;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 102923 103133 . + 0 ID=Thaps10571;Parent=Thaps10571;rank=1 chr17 . exon 102923 103133 . + . ID=Thaps10571.1;Parent=Thaps10571;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 103646 104076 . + 0 ID=Thaps10571;Parent=Thaps10571;rank=2 chr17 . exon 103646 104076 . + . ID=Thaps10571.2;Parent=Thaps10571;constitutive=1;ensembl_end_phase=2;rank=2 chr17 ensembl protein_coding_gene 106013 107293 . + . ID=Thaps25212;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDX4];external_name=Thaps25212;logic_name=jgi_thaps3 chr17 ensembl transcript 106013 107293 . + . ID=Thaps25212;Parent=Thaps25212;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 106013 107293 . + 0 ID=Thaps25212;Parent=Thaps25212;rank=1 chr17 . exon 106013 107293 . + . ID=Thaps25212.1;Parent=Thaps25212;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 100734 102240 . + . ID=Thaps42621;biotype=protein_coding;description=Histidyl tRNA synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CDX2];external_name=Thaps42621;logic_name=jgi_thaps3 chr17 ensembl transcript 100734 102240 . + . ID=Thaps42621;Parent=Thaps42621;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 100734 101749 . + 0 ID=Thaps42621;Parent=Thaps42621;rank=1 chr17 . exon 100734 101749 . + . ID=Thaps42621.1;Parent=Thaps42621;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 101862 102240 . + 0 ID=Thaps42621;Parent=Thaps42621;rank=2 chr17 . exon 101862 102240 . + . ID=Thaps42621.2;Parent=Thaps42621;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . repeat_region 114750 114790 . ? . description=trf chr17 . repeat_region 114751 114790 . ? . description=trf chr17 . repeat_region 117199 117222 . ? . description=trf chr17 ensembl protein_coding_gene 111828 115551 . - . ID=Thaps25214;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDX5];external_name=Thaps25214;logic_name=jgi_thaps3 chr17 ensembl transcript 111828 115551 . - . ID=Thaps25214;Parent=Thaps25214;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 111828 111899 . - 0 ID=Thaps25214;Parent=Thaps25214;rank=7 chr17 . exon 111828 111899 . - . ID=Thaps25214.7;Parent=Thaps25214;constitutive=1;rank=7 chr17 . CDS 111990 112430 . - 0 ID=Thaps25214;Parent=Thaps25214;rank=6 chr17 . exon 111990 112430 . - . ID=Thaps25214.6;Parent=Thaps25214;constitutive=1;rank=6 chr17 . CDS 112518 112769 . - 0 ID=Thaps25214;Parent=Thaps25214;rank=5 chr17 . exon 112518 112769 . - . ID=Thaps25214.5;Parent=Thaps25214;constitutive=1;rank=5 chr17 . CDS 112868 113581 . - 0 ID=Thaps25214;Parent=Thaps25214;rank=4 chr17 . exon 112868 113581 . - . ID=Thaps25214.4;Parent=Thaps25214;constitutive=1;rank=4 chr17 . CDS 113692 113964 . - 0 ID=Thaps25214;Parent=Thaps25214;rank=3 chr17 . exon 113692 113964 . - . ID=Thaps25214.3;Parent=Thaps25214;constitutive=1;rank=3 chr17 . CDS 114050 114610 . - 0 ID=Thaps25214;Parent=Thaps25214;rank=2 chr17 . exon 114050 114610 . - . ID=Thaps25214.2;Parent=Thaps25214;constitutive=1;rank=2 chr17 . CDS 114730 115551 . - 0 ID=Thaps25214;Parent=Thaps25214;rank=1 chr17 . exon 114730 115551 . - . ID=Thaps25214.1;Parent=Thaps25214;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 116350 118201 . + . ID=Thaps42624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDX6];external_name=Thaps42624;logic_name=jgi_thaps3 chr17 ensembl transcript 116350 118201 . + . ID=Thaps42624;Parent=Thaps42624;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 116350 116582 . + 0 ID=Thaps42624;Parent=Thaps42624;rank=1 chr17 . exon 116350 116582 . + . ID=Thaps42624.1;Parent=Thaps42624;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 116685 116991 . + 0 ID=Thaps42624;Parent=Thaps42624;rank=2 chr17 . exon 116685 116991 . + . ID=Thaps42624.2;Parent=Thaps42624;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 117052 117290 . + 0 ID=Thaps42624;Parent=Thaps42624;rank=3 chr17 . exon 117052 117290 . + . ID=Thaps42624.3;Parent=Thaps42624;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 117535 118201 . + 0 ID=Thaps42624;Parent=Thaps42624;rank=4 chr17 . exon 117535 118201 . + . ID=Thaps42624.4;Parent=Thaps42624;constitutive=1;ensembl_end_phase=1;rank=4 chr17 . repeat_region 122412 122419 . ? . description=dust chr17 . repeat_region 123985 123994 . ? . description=dust chr17 ensembl protein_coding_gene 122769 123521 . - . ID=Thaps10577;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDX7];external_name=Thaps10577;logic_name=jgi_thaps3 chr17 ensembl transcript 122769 123521 . - . ID=Thaps10577;Parent=Thaps10577;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 122769 123521 . - 0 ID=Thaps10577;Parent=Thaps10577;rank=1 chr17 . exon 122769 123521 . - . ID=Thaps10577.1;Parent=Thaps10577;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 129565 131782 . + . ID=Thaps10581;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDY1];external_name=Thaps10581;logic_name=jgi_thaps3 chr17 ensembl transcript 129565 131782 . + . ID=Thaps10581;Parent=Thaps10581;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 129565 129862 . + 0 ID=Thaps10581;Parent=Thaps10581;rank=1 chr17 . exon 129565 129862 . + . ID=Thaps10581.1;Parent=Thaps10581;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 130104 131782 . + 0 ID=Thaps10581;Parent=Thaps10581;rank=2 chr17 ensembl protein_coding_gene 124358 125346 . - . ID=Thaps25217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDX8];external_name=Thaps25217;logic_name=jgi_thaps3 chr17 ensembl transcript 124358 125346 . - . ID=Thaps25217;Parent=Thaps25217;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 124358 124944 . - 0 ID=Thaps25217;Parent=Thaps25217;rank=2 chr17 . exon 124358 124944 . - . ID=Thaps25217.2;Parent=Thaps25217;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 125070 125346 . - 0 ID=Thaps25217;Parent=Thaps25217;rank=1 chr17 . exon 125070 125346 . - . ID=Thaps25217.1;Parent=Thaps25217;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 126218 127084 . + . ID=Thaps25218;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDX9];external_name=Thaps25218;logic_name=jgi_thaps3 chr17 ensembl transcript 126218 127084 . + . ID=Thaps25218;Parent=Thaps25218;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 126218 127084 . + 0 ID=Thaps25218;Parent=Thaps25218;rank=1 chr17 . exon 126218 127084 . + . ID=Thaps25218.1;Parent=Thaps25218;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 127381 128650 . - . ID=Thaps264420;biotype=protein_coding;description=Pseudouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CDY0];external_name=Thaps264420;logic_name=jgi_thaps3 chr17 ensembl transcript 127381 128650 . - . ID=Thaps264420;Parent=Thaps264420;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 127381 127444 . - 0 ID=Thaps264420;Parent=Thaps264420;rank=7 chr17 . exon 127381 127444 . - . ID=Thaps264420.7;Parent=Thaps264420;constitutive=1;ensembl_end_phase=1;rank=7 chr17 . CDS 127490 127659 . - 0 ID=Thaps264420;Parent=Thaps264420;rank=6 chr17 . exon 127490 127659 . - . ID=Thaps264420.6;Parent=Thaps264420;constitutive=1;ensembl_end_phase=2;rank=6 chr17 . CDS 127729 127877 . - 0 ID=Thaps264420;Parent=Thaps264420;rank=5 chr17 . exon 127729 127877 . - . ID=Thaps264420.5;Parent=Thaps264420;constitutive=1;ensembl_end_phase=2;rank=5 chr17 . CDS 127962 128074 . - 0 ID=Thaps264420;Parent=Thaps264420;rank=4 chr17 . exon 127962 128074 . - . ID=Thaps264420.4;Parent=Thaps264420;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 128207 128277 . - 0 ID=Thaps264420;Parent=Thaps264420;rank=3 chr17 . exon 128207 128277 . - . ID=Thaps264420.3;Parent=Thaps264420;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 128341 128499 . - 0 ID=Thaps264420;Parent=Thaps264420;rank=2 chr17 . exon 128341 128499 . - . ID=Thaps264420.2;Parent=Thaps264420;constitutive=1;rank=2 chr17 . CDS 128585 128650 . - 0 ID=Thaps264420;Parent=Thaps264420;rank=1 chr17 . exon 128585 128650 . - . ID=Thaps264420.1;Parent=Thaps264420;constitutive=1;rank=1 chr17 . repeat_region 133447 133504 . - . description=Copia9LTR_TP chr17 . exon 130104 131782 . + . ID=Thaps10581.2;Parent=Thaps10581;constitutive=1;ensembl_end_phase=2;rank=2 chr17 ensembl protein_coding_gene 132088 133288 . - . ID=Thaps25219;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDY2];external_name=Thaps25219;logic_name=jgi_thaps3 chr17 ensembl transcript 132088 133288 . - . ID=Thaps25219;Parent=Thaps25219;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 132088 132132 . - 0 ID=Thaps25219;Parent=Thaps25219;rank=3 chr17 . exon 132088 132132 . - . ID=Thaps25219.3;Parent=Thaps25219;constitutive=1;rank=3 chr17 . CDS 132162 132677 . - 0 ID=Thaps25219;Parent=Thaps25219;rank=2 chr17 . exon 132162 132677 . - . ID=Thaps25219.2;Parent=Thaps25219;constitutive=1;rank=2 chr17 . CDS 132821 133288 . - 0 ID=Thaps25219;Parent=Thaps25219;rank=1 chr17 . exon 132821 133288 . - . ID=Thaps25219.1;Parent=Thaps25219;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 134180 138572 . + . ID=Thaps264421;biotype=protein_coding;description=ABC transporter protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDY3];external_name=Thaps264421;logic_name=jgi_thaps3 chr17 ensembl transcript 134180 138572 . + . ID=Thaps264421;Parent=Thaps264421;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 134180 134597 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=1 chr17 . exon 134180 134597 . + . ID=Thaps264421.1;Parent=Thaps264421;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 134694 134741 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=2 chr17 . exon 134694 134741 . + . ID=Thaps264421.2;Parent=Thaps264421;constitutive=1;rank=2 chr17 . CDS 134832 136281 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=3 chr17 . exon 134832 136281 . + . ID=Thaps264421.3;Parent=Thaps264421;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 136400 136516 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=4 chr17 . exon 136400 136516 . + . ID=Thaps264421.4;Parent=Thaps264421;constitutive=1;rank=4 chr17 . CDS 136567 136599 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=5 chr17 . exon 136567 136599 . + . ID=Thaps264421.5;Parent=Thaps264421;constitutive=1;rank=5 chr17 . CDS 136709 137048 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=6 chr17 . exon 136709 137048 . + . ID=Thaps264421.6;Parent=Thaps264421;constitutive=1;ensembl_end_phase=1;rank=6 chr17 . CDS 137133 137177 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=7 chr17 . exon 137133 137177 . + . ID=Thaps264421.7;Parent=Thaps264421;constitutive=1;rank=7 chr17 . CDS 137267 137872 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=8 chr17 . exon 137267 137872 . + . ID=Thaps264421.8;Parent=Thaps264421;constitutive=1;rank=8 chr17 . CDS 137948 138183 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=9 chr17 . exon 137948 138183 . + . ID=Thaps264421.9;Parent=Thaps264421;constitutive=1;ensembl_end_phase=2;rank=9 chr17 . CDS 138287 138339 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=10 chr17 . exon 138287 138339 . + . ID=Thaps264421.10;Parent=Thaps264421;constitutive=1;ensembl_end_phase=2;rank=10 chr17 . CDS 138422 138572 . + 0 ID=Thaps264421;Parent=Thaps264421;rank=11 chr17 . exon 138422 138572 . + . ID=Thaps264421.11;Parent=Thaps264421;constitutive=1;ensembl_end_phase=1;rank=11 chr17 . repeat_region 141138 141168 . ? . description=dust chr17 . repeat_region 141139 141168 . ? . description=trf chr17 . repeat_region 141331 141366 . ? . description=dust chr17 . repeat_region 147701 147758 . ? . description=trf chr17 . repeat_region 149933 149995 . ? . description=trf chr17 . repeat_region 149934 149983 . ? . description=trf chr17 . repeat_region 149942 149999 . ? . description=trf chr17 ensembl protein_coding_gene 147598 152403 . - . ID=Thaps10585;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDY5];external_name=Thaps10585;logic_name=jgi_thaps3 chr17 ensembl transcript 147598 152403 . - . ID=Thaps10585;Parent=Thaps10585;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 147598 148203 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=11 chr17 . exon 147598 148203 . - . ID=Thaps10585.11;Parent=Thaps10585;constitutive=1;rank=11 chr17 . CDS 148369 148487 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=10 chr17 . exon 148369 148487 . - . ID=Thaps10585.10;Parent=Thaps10585;constitutive=1;ensembl_end_phase=2;rank=10 chr17 . CDS 148530 148839 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=9 chr17 . exon 148530 148839 . - . ID=Thaps10585.9;Parent=Thaps10585;constitutive=1;ensembl_end_phase=1;rank=9 chr17 . CDS 148894 149118 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=8 chr17 . exon 148894 149118 . - . ID=Thaps10585.8;Parent=Thaps10585;constitutive=1;rank=8 chr17 . CDS 149263 149451 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=7 chr17 . exon 149263 149451 . - . ID=Thaps10585.7;Parent=Thaps10585;constitutive=1;rank=7 chr17 . CDS 149537 149573 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=6 chr17 . exon 149537 149573 . - . ID=Thaps10585.6;Parent=Thaps10585;constitutive=1;ensembl_end_phase=1;rank=6 chr17 . CDS 149763 149883 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=5 chr17 . exon 149763 149883 . - . ID=Thaps10585.5;Parent=Thaps10585;constitutive=1;ensembl_end_phase=1;rank=5 chr17 . CDS 150024 150175 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=4 chr17 . CDS 150292 150685 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=3 chr17 . CDS 150782 151289 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=2 chr17 . CDS 151804 152403 . - 0 ID=Thaps10585;Parent=Thaps10585;rank=1 chr17 ensembl protein_coding_gene 143173 144480 . + . ID=Thaps37862;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDY4];external_name=Thaps37862;logic_name=jgi_thaps3 chr17 ensembl transcript 143173 144480 . + . ID=Thaps37862;Parent=Thaps37862;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 143173 143353 . + 0 ID=Thaps37862;Parent=Thaps37862;rank=1 chr17 . exon 143173 143353 . + . ID=Thaps37862.1;Parent=Thaps37862;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 143438 143718 . + 0 ID=Thaps37862;Parent=Thaps37862;rank=2 chr17 . exon 143438 143718 . + . ID=Thaps37862.2;Parent=Thaps37862;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 143839 144220 . + 0 ID=Thaps37862;Parent=Thaps37862;rank=3 chr17 . exon 143839 144220 . + . ID=Thaps37862.3;Parent=Thaps37862;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 144275 144480 . + 0 ID=Thaps37862;Parent=Thaps37862;rank=4 chr17 . exon 144275 144480 . + . ID=Thaps37862.4;Parent=Thaps37862;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . repeat_region 151352 151537 . + . description=TE2_TP chr17 . repeat_region 151603 151784 . + . description=TE2_TP chr17 . exon 150024 150175 . - . ID=Thaps10585.4;Parent=Thaps10585;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . exon 150292 150685 . - . ID=Thaps10585.3;Parent=Thaps10585;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . exon 150782 151289 . - . ID=Thaps10585.2;Parent=Thaps10585;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . exon 151804 152403 . - . ID=Thaps10585.1;Parent=Thaps10585;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 154465 156473 . - . ID=Thaps25222;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDY6];external_name=Thaps25222;logic_name=jgi_thaps3 chr17 ensembl transcript 154465 156473 . - . ID=Thaps25222;Parent=Thaps25222;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 154465 155208 . - 0 ID=Thaps25222;Parent=Thaps25222;rank=3 chr17 . exon 154465 155208 . - . ID=Thaps25222.3;Parent=Thaps25222;constitutive=1;rank=3 chr17 . CDS 155243 156050 . - 0 ID=Thaps25222;Parent=Thaps25222;rank=2 chr17 . exon 155243 156050 . - . ID=Thaps25222.2;Parent=Thaps25222;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 156160 156473 . - 0 ID=Thaps25222;Parent=Thaps25222;rank=1 chr17 . exon 156160 156473 . - . ID=Thaps25222.1;Parent=Thaps25222;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 156969 162226 . + . ID=Thaps25223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDY7];external_name=Thaps25223;logic_name=jgi_thaps3 chr17 ensembl transcript 156969 162226 . + . ID=Thaps25223;Parent=Thaps25223;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 156969 157343 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=1 chr17 . exon 156969 157343 . + . ID=Thaps25223.1;Parent=Thaps25223;constitutive=1;rank=1 chr17 . CDS 157386 159001 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=2 chr17 . exon 157386 159001 . + . ID=Thaps25223.2;Parent=Thaps25223;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 159084 159351 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=3 chr17 . exon 159084 159351 . + . ID=Thaps25223.3;Parent=Thaps25223;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 159435 159692 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=4 chr17 . exon 159435 159692 . + . ID=Thaps25223.4;Parent=Thaps25223;constitutive=1;rank=4 chr17 . CDS 159741 160439 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=5 chr17 . exon 159741 160439 . + . ID=Thaps25223.5;Parent=Thaps25223;constitutive=1;rank=5 chr17 . CDS 160527 160884 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=6 chr17 . CDS 160967 161233 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=7 chr17 . CDS 161307 161335 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=8 chr17 . CDS 161432 161551 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=9 chr17 . CDS 161626 161892 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=10 chr17 . CDS 161969 162226 . + 0 ID=Thaps25223;Parent=Thaps25223;rank=11 chr17 . repeat_region 165940 165955 . ? . description=dust chr17 . repeat_region 167127 167134 . ? . description=dust chr17 . repeat_region 167642 167649 . ? . description=dust chr17 ensembl protein_coding_gene 162911 164221 . - . ID=Thaps10588;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDY8];external_name=Thaps10588;logic_name=jgi_thaps3 chr17 ensembl transcript 162911 164221 . - . ID=Thaps10588;Parent=Thaps10588;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 162911 164221 . - 0 ID=Thaps10588;Parent=Thaps10588;rank=1 chr17 . exon 162911 164221 . - . ID=Thaps10588.1;Parent=Thaps10588;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 166134 167099 . - . ID=Thaps10589;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDY9];external_name=Thaps10589;logic_name=jgi_thaps3 chr17 ensembl transcript 166134 167099 . - . ID=Thaps10589;Parent=Thaps10589;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 166134 167099 . - 0 ID=Thaps10589;Parent=Thaps10589;rank=1 chr17 . exon 166134 167099 . - . ID=Thaps10589.1;Parent=Thaps10589;constitutive=1;rank=1 chr17 . exon 160527 160884 . + . ID=Thaps25223.6;Parent=Thaps25223;constitutive=1;ensembl_end_phase=1;rank=6 chr17 . exon 160967 161233 . + . ID=Thaps25223.7;Parent=Thaps25223;constitutive=1;rank=7 chr17 . exon 161307 161335 . + . ID=Thaps25223.8;Parent=Thaps25223;constitutive=1;ensembl_end_phase=2;rank=8 chr17 . exon 161432 161551 . + . ID=Thaps25223.9;Parent=Thaps25223;constitutive=1;rank=9 chr17 . exon 161626 161892 . + . ID=Thaps25223.10;Parent=Thaps25223;constitutive=1;rank=10 chr17 . exon 161969 162226 . + . ID=Thaps25223.11;Parent=Thaps25223;constitutive=1;rank=11 chr17 ensembl protein_coding_gene 167394 170543 . - . ID=Thaps25224;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ0];external_name=Thaps25224;logic_name=jgi_thaps3 chr17 ensembl transcript 167394 170543 . - . ID=Thaps25224;Parent=Thaps25224;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 167394 170543 . - 0 ID=Thaps25224;Parent=Thaps25224;rank=1 chr17 . exon 167394 170543 . - . ID=Thaps25224.1;Parent=Thaps25224;constitutive=1;rank=1 chr17 . repeat_region 170050 170078 . ? . description=trf chr17 . repeat_region 170113 170141 . ? . description=trf chr17 . repeat_region 170329 170358 . ? . description=trf chr17 . repeat_region 170897 170945 . ? . description=trf chr17 . repeat_region 172534 172563 . ? . description=trf chr17 ensembl protein_coding_gene 172438 173022 . - . ID=Thaps10592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ2];external_name=Thaps10592;logic_name=jgi_thaps3 chr17 ensembl transcript 172438 173022 . - . ID=Thaps10592;Parent=Thaps10592;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 172438 173022 . - 0 ID=Thaps10592;Parent=Thaps10592;rank=1 chr17 . exon 172438 173022 . - . ID=Thaps10592.1;Parent=Thaps10592;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 174302 175138 . + . ID=Thaps17582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ3];external_name=Thaps17582;logic_name=jgi_thaps3 chr17 ensembl transcript 174302 175138 . + . ID=Thaps17582;Parent=Thaps17582;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 174302 174702 . + 0 ID=Thaps17582;Parent=Thaps17582;rank=1 chr17 . exon 174302 174702 . + . ID=Thaps17582.1;Parent=Thaps17582;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 174829 175138 . + 0 ID=Thaps17582;Parent=Thaps17582;rank=2 chr17 . exon 174829 175138 . + . ID=Thaps17582.2;Parent=Thaps17582;constitutive=1;ensembl_end_phase=1;rank=2 chr17 ensembl protein_coding_gene 171080 172049 . + . ID=Thaps25225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ1];external_name=Thaps25225;logic_name=jgi_thaps3 chr17 ensembl transcript 171080 172049 . + . ID=Thaps25225;Parent=Thaps25225;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 171080 171254 . + 0 ID=Thaps25225;Parent=Thaps25225;rank=1 chr17 . exon 171080 171254 . + . ID=Thaps25225.1;Parent=Thaps25225;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 171343 171572 . + 0 ID=Thaps25225;Parent=Thaps25225;rank=2 chr17 . exon 171343 171572 . + . ID=Thaps25225.2;Parent=Thaps25225;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 171723 172049 . + 0 ID=Thaps25225;Parent=Thaps25225;rank=3 chr17 . exon 171723 172049 . + . ID=Thaps25225.3;Parent=Thaps25225;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 179217 180574 . + . ID=Thaps269896;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ4];external_name=Thaps269896;logic_name=jgi_thaps3 chr17 ensembl transcript 179217 180574 . + . ID=Thaps269896;Parent=Thaps269896;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 179217 179319 . + 0 ID=Thaps269896;Parent=Thaps269896;rank=1 chr17 . exon 179217 179319 . + . ID=Thaps269896.1;Parent=Thaps269896;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 179420 179592 . + 0 ID=Thaps269896;Parent=Thaps269896;rank=2 chr17 . exon 179420 179592 . + . ID=Thaps269896.2;Parent=Thaps269896;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 179650 179743 . + 0 ID=Thaps269896;Parent=Thaps269896;rank=3 chr17 . exon 179650 179743 . + . ID=Thaps269896.3;Parent=Thaps269896;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 179834 180232 . + 0 ID=Thaps269896;Parent=Thaps269896;rank=4 chr17 . exon 179834 180232 . + . ID=Thaps269896.4;Parent=Thaps269896;constitutive=1;rank=4 chr17 . CDS 180306 180514 . + 0 ID=Thaps269896;Parent=Thaps269896;rank=5 chr17 . CDS 180566 180574 . + 0 ID=Thaps269896;Parent=Thaps269896;rank=6 chr17 . repeat_region 189755 189797 . ? . description=dust chr17 ensembl protein_coding_gene 181814 183908 . - . ID=Thaps10595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ5];external_name=Thaps10595;logic_name=jgi_thaps3 chr17 ensembl transcript 181814 183908 . - . ID=Thaps10595;Parent=Thaps10595;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 181814 182411 . - 0 ID=Thaps10595;Parent=Thaps10595;rank=4 chr17 . exon 181814 182411 . - . ID=Thaps10595.4;Parent=Thaps10595;constitutive=1;ensembl_end_phase=1;rank=4 chr17 . CDS 182490 183315 . - 0 ID=Thaps10595;Parent=Thaps10595;rank=3 chr17 . exon 182490 183315 . - . ID=Thaps10595.3;Parent=Thaps10595;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 183644 183707 . - 0 ID=Thaps10595;Parent=Thaps10595;rank=2 chr17 . exon 183644 183707 . - . ID=Thaps10595.2;Parent=Thaps10595;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 183837 183908 . - 0 ID=Thaps10595;Parent=Thaps10595;rank=1 chr17 . exon 183837 183908 . - . ID=Thaps10595.1;Parent=Thaps10595;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 188329 188998 . - . ID=Thaps10598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ8];external_name=Thaps10598;logic_name=jgi_thaps3 chr17 ensembl transcript 188329 188998 . - . ID=Thaps10598;Parent=Thaps10598;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 188329 188600 . - 0 ID=Thaps10598;Parent=Thaps10598;rank=3 chr17 . exon 188329 188600 . - . ID=Thaps10598.3;Parent=Thaps10598;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 188667 188750 . - 0 ID=Thaps10598;Parent=Thaps10598;rank=2 chr17 . exon 188667 188750 . - . ID=Thaps10598.2;Parent=Thaps10598;constitutive=1;rank=2 chr17 . CDS 188827 188998 . - 0 ID=Thaps10598;Parent=Thaps10598;rank=1 chr17 . exon 188827 188998 . - . ID=Thaps10598.1;Parent=Thaps10598;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 184553 186093 . - . ID=Thaps25228;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ6];external_name=Thaps25228;logic_name=jgi_thaps3 chr17 ensembl transcript 184553 186093 . - . ID=Thaps25228;Parent=Thaps25228;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 184553 185108 . - 0 ID=Thaps25228;Parent=Thaps25228;rank=3 chr17 . exon 184553 185108 . - . ID=Thaps25228.3;Parent=Thaps25228;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 185311 185450 . - 0 ID=Thaps25228;Parent=Thaps25228;rank=2 chr17 . exon 185311 185450 . - . ID=Thaps25228.2;Parent=Thaps25228;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 185791 186093 . - 0 ID=Thaps25228;Parent=Thaps25228;rank=1 chr17 . exon 185791 186093 . - . ID=Thaps25228.1;Parent=Thaps25228;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 186345 187931 . + . ID=Thaps25229;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ7];external_name=Thaps25229;logic_name=jgi_thaps3 chr17 ensembl transcript 186345 187931 . + . ID=Thaps25229;Parent=Thaps25229;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 186345 187931 . + 0 ID=Thaps25229;Parent=Thaps25229;rank=1 chr17 . exon 186345 187931 . + . ID=Thaps25229.1;Parent=Thaps25229;constitutive=1;rank=1 chr17 . exon 180306 180514 . + . ID=Thaps269896.5;Parent=Thaps269896;constitutive=1;ensembl_end_phase=2;rank=5 chr17 . exon 180566 180574 . + . ID=Thaps269896.6;Parent=Thaps269896;constitutive=1;rank=6 chr17 ensembl protein_coding_gene 189992 190956 . + . ID=Thaps15950;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDZ9];external_name=Thaps15950;logic_name=jgi_thaps3 chr17 ensembl transcript 189992 190956 . + . ID=Thaps15950;Parent=Thaps15950;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 189992 190491 . + 0 ID=Thaps15950;Parent=Thaps15950;rank=1 chr17 . exon 189992 190491 . + . ID=Thaps15950.1;Parent=Thaps15950;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 190575 190956 . + 0 ID=Thaps15950;Parent=Thaps15950;rank=2 chr17 . exon 190575 190956 . + . ID=Thaps15950.2;Parent=Thaps15950;constitutive=1;ensembl_end_phase=1;rank=2 chr17 ensembl protein_coding_gene 191807 192484 . - . ID=Thaps25231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE00];external_name=Thaps25231;logic_name=jgi_thaps3 chr17 ensembl transcript 191807 192484 . - . ID=Thaps25231;Parent=Thaps25231;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 191807 192484 . - 0 ID=Thaps25231;Parent=Thaps25231;rank=1 chr17 . exon 191807 192484 . - . ID=Thaps25231.1;Parent=Thaps25231;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 198930 200801 . - . ID=Thaps25233;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE02];external_name=Thaps25233;logic_name=jgi_thaps3 chr17 ensembl transcript 198930 200801 . - . ID=Thaps25233;Parent=Thaps25233;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 198930 200801 . - 0 ID=Thaps25233;Parent=Thaps25233;rank=1 chr17 . exon 198930 200801 . - . ID=Thaps25233.1;Parent=Thaps25233;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 193039 198339 . - . ID=Thaps269900;biotype=protein_coding;description=Glutamate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CE01];external_name=GLSF;logic_name=jgi_thaps3 chr17 ensembl transcript 193039 198339 . - . ID=Thaps269900;Parent=Thaps269900;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 193039 193926 . - 0 ID=Thaps269900;Parent=Thaps269900;rank=6 chr17 . exon 193039 193926 . - . ID=Thaps269900.6;Parent=Thaps269900;constitutive=1;rank=6 chr17 . CDS 193966 194682 . - 0 ID=Thaps269900;Parent=Thaps269900;rank=5 chr17 . exon 193966 194682 . - . ID=Thaps269900.5;Parent=Thaps269900;constitutive=1;rank=5 chr17 . CDS 194773 195366 . - 0 ID=Thaps269900;Parent=Thaps269900;rank=4 chr17 . exon 194773 195366 . - . ID=Thaps269900.4;Parent=Thaps269900;constitutive=1;rank=4 chr17 . CDS 195400 197100 . - 0 ID=Thaps269900;Parent=Thaps269900;rank=3 chr17 . exon 195400 197100 . - . ID=Thaps269900.3;Parent=Thaps269900;constitutive=1;rank=3 chr17 . CDS 197170 197918 . - 0 ID=Thaps269900;Parent=Thaps269900;rank=2 chr17 . exon 197170 197918 . - . ID=Thaps269900.2;Parent=Thaps269900;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 198045 198339 . - 0 ID=Thaps269900;Parent=Thaps269900;rank=1 chr17 . exon 198045 198339 . - . ID=Thaps269900.1;Parent=Thaps269900;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . repeat_region 205219 205227 . ? . description=dust chr17 . repeat_region 207402 207427 . ? . description=trf chr17 ensembl protein_coding_gene 201381 202754 . + . ID=Thaps10603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE03];external_name=Thaps10603;logic_name=jgi_thaps3 chr17 ensembl transcript 201381 202754 . + . ID=Thaps10603;Parent=Thaps10603;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 201381 202754 . + 0 ID=Thaps10603;Parent=Thaps10603;rank=1 chr17 . exon 201381 202754 . + . ID=Thaps10603.1;Parent=Thaps10603;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 203054 204008 . - . ID=Thaps10604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE04];external_name=Thaps10604;logic_name=jgi_thaps3 chr17 ensembl transcript 203054 204008 . - . ID=Thaps10604;Parent=Thaps10604;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 203054 203704 . - 0 ID=Thaps10604;Parent=Thaps10604;rank=2 chr17 . exon 203054 203704 . - . ID=Thaps10604.2;Parent=Thaps10604;constitutive=1;rank=2 chr17 . CDS 203811 204008 . - 0 ID=Thaps10604;Parent=Thaps10604;rank=1 chr17 . exon 203811 204008 . - . ID=Thaps10604.1;Parent=Thaps10604;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 204512 205996 . - . ID=Thaps25234;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE05];external_name=Thaps25234;logic_name=jgi_thaps3 chr17 ensembl transcript 204512 205996 . - . ID=Thaps25234;Parent=Thaps25234;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 204512 204720 . - 0 ID=Thaps25234;Parent=Thaps25234;rank=4 chr17 . exon 204512 204720 . - . ID=Thaps25234.4;Parent=Thaps25234;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 204813 205199 . - 0 ID=Thaps25234;Parent=Thaps25234;rank=3 chr17 . exon 204813 205199 . - . ID=Thaps25234.3;Parent=Thaps25234;constitutive=1;rank=3 chr17 . CDS 205363 205532 . - 0 ID=Thaps25234;Parent=Thaps25234;rank=2 chr17 . exon 205363 205532 . - . ID=Thaps25234.2;Parent=Thaps25234;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 205902 205996 . - 0 ID=Thaps25234;Parent=Thaps25234;rank=1 chr17 . exon 205902 205996 . - . ID=Thaps25234.1;Parent=Thaps25234;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 207920 211221 . - . ID=Thaps25235;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE07];external_name=Thaps25235;logic_name=jgi_thaps3 chr17 ensembl transcript 207920 211221 . - . ID=Thaps25235;Parent=Thaps25235;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 207920 208469 . - 0 ID=Thaps25235;Parent=Thaps25235;rank=2 chr17 . exon 207920 208469 . - . ID=Thaps25235.2;Parent=Thaps25235;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 208490 211221 . - 0 ID=Thaps25235;Parent=Thaps25235;rank=1 chr17 . exon 208490 211221 . - . ID=Thaps25235.1;Parent=Thaps25235;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 206115 207505 . + . ID=Thaps264430;biotype=protein_coding;description=Geranylgeranyl diphosphate synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CE06];external_name=GGPS3;logic_name=jgi_thaps3 chr17 ensembl transcript 206115 207505 . + . ID=Thaps264430;Parent=Thaps264430;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 206115 206288 . + 0 ID=Thaps264430;Parent=Thaps264430;rank=1 chr17 . exon 206115 206288 . + . ID=Thaps264430.1;Parent=Thaps264430;constitutive=1;rank=1 chr17 . CDS 206428 206616 . + 0 ID=Thaps264430;Parent=Thaps264430;rank=2 chr17 . exon 206428 206616 . + . ID=Thaps264430.2;Parent=Thaps264430;constitutive=1;rank=2 chr17 . CDS 206747 207071 . + 0 ID=Thaps264430;Parent=Thaps264430;rank=3 chr17 . exon 206747 207071 . + . ID=Thaps264430.3;Parent=Thaps264430;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 207144 207505 . + 0 ID=Thaps264430;Parent=Thaps264430;rank=4 chr17 . exon 207144 207505 . + . ID=Thaps264430.4;Parent=Thaps264430;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . repeat_region 218970 219149 . - . description=Gypsy3LTR_TP chr17 . repeat_region 219150 219412 . - . description=Gypsy3LTR_TP chr17 . repeat_region 219794 219997 . + . description=Gypsy1ALTR_TP chr17 ensembl protein_coding_gene 215818 216915 . - . ID=Thaps10608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE09];external_name=Thaps10608;logic_name=jgi_thaps3 chr17 ensembl transcript 215818 216915 . - . ID=Thaps10608;Parent=Thaps10608;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 215818 216915 . - 0 ID=Thaps10608;Parent=Thaps10608;rank=1 chr17 . exon 215818 216915 . - . ID=Thaps10608.1;Parent=Thaps10608;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 217256 218896 . + . ID=Thaps25236;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE10];external_name=Thaps25236;logic_name=jgi_thaps3 chr17 ensembl transcript 217256 218896 . + . ID=Thaps25236;Parent=Thaps25236;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 217256 218050 . + 0 ID=Thaps25236;Parent=Thaps25236;rank=1 chr17 . exon 217256 218050 . + . ID=Thaps25236.1;Parent=Thaps25236;constitutive=1;rank=1 chr17 . CDS 218084 218173 . + 0 ID=Thaps25236;Parent=Thaps25236;rank=2 chr17 . exon 218084 218173 . + . ID=Thaps25236.2;Parent=Thaps25236;constitutive=1;rank=2 chr17 . CDS 218474 218896 . + 0 ID=Thaps25236;Parent=Thaps25236;rank=3 chr17 . exon 218474 218896 . + . ID=Thaps25236.3;Parent=Thaps25236;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 212713 213308 . + . ID=Thaps264431;biotype=protein_coding;description=3-oxo-5-alpha-steroid 4-dehydrogenase 1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE08];external_name=Thaps264431;logic_name=jgi_thaps3 chr17 ensembl transcript 212713 213308 . + . ID=Thaps264431;Parent=Thaps264431;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 212713 212885 . + 0 ID=Thaps264431;Parent=Thaps264431;rank=1 chr17 . exon 212713 212885 . + . ID=Thaps264431.1;Parent=Thaps264431;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 212940 213308 . + 0 ID=Thaps264431;Parent=Thaps264431;rank=2 chr17 . exon 212940 213308 . + . ID=Thaps264431.2;Parent=Thaps264431;constitutive=1;rank=2 chr17 . repeat_region 220121 220128 . ? . description=dust chr17 . repeat_region 227751 227776 . ? . description=dust chr17 ensembl protein_coding_gene 223867 224898 . + . ID=Thaps10612;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE13];external_name=Thaps10612;logic_name=jgi_thaps3 chr17 ensembl transcript 223867 224898 . + . ID=Thaps10612;Parent=Thaps10612;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 223867 224898 . + 0 ID=Thaps10612;Parent=Thaps10612;rank=1 chr17 . exon 223867 224898 . + . ID=Thaps10612.1;Parent=Thaps10612;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 225188 227414 . + . ID=Thaps10613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE14];external_name=Thaps10613;logic_name=jgi_thaps3 chr17 ensembl transcript 225188 227414 . + . ID=Thaps10613;Parent=Thaps10613;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 225188 226707 . + 0 ID=Thaps10613;Parent=Thaps10613;rank=1 chr17 . exon 225188 226707 . + . ID=Thaps10613.1;Parent=Thaps10613;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 226802 227414 . + 0 ID=Thaps10613;Parent=Thaps10613;rank=2 chr17 . exon 226802 227414 . + . ID=Thaps10613.2;Parent=Thaps10613;constitutive=1;ensembl_end_phase=1;rank=2 chr17 ensembl protein_coding_gene 229301 231616 . - . ID=Thaps10615;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE16];external_name=Thaps10615;logic_name=jgi_thaps3 chr17 ensembl transcript 229301 231616 . - . ID=Thaps10615;Parent=Thaps10615;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 229301 231616 . - 0 ID=Thaps10615;Parent=Thaps10615;rank=1 chr17 . exon 229301 231616 . - . ID=Thaps10615.1;Parent=Thaps10615;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 220222 221981 . + . ID=Thaps25237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE11];external_name=Thaps25237;logic_name=jgi_thaps3 chr17 ensembl transcript 220222 221981 . + . ID=Thaps25237;Parent=Thaps25237;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 220222 220764 . + 0 ID=Thaps25237;Parent=Thaps25237;rank=1 chr17 . exon 220222 220764 . + . ID=Thaps25237.1;Parent=Thaps25237;constitutive=1;rank=1 chr17 . CDS 220896 221655 . + 0 ID=Thaps25237;Parent=Thaps25237;rank=2 chr17 . exon 220896 221655 . + . ID=Thaps25237.2;Parent=Thaps25237;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 221749 221981 . + 0 ID=Thaps25237;Parent=Thaps25237;rank=3 chr17 . exon 221749 221981 . + . ID=Thaps25237.3;Parent=Thaps25237;constitutive=1;ensembl_end_phase=2;rank=3 chr17 ensembl protein_coding_gene 222211 223242 . - . ID=Thaps269901;biotype=protein_coding;description=Spermidine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CE12];external_name=Thaps269901;logic_name=jgi_thaps3 chr17 ensembl transcript 222211 223242 . - . ID=Thaps269901;Parent=Thaps269901;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 222211 222333 . - 0 ID=Thaps269901;Parent=Thaps269901;rank=4 chr17 . exon 222211 222333 . - . ID=Thaps269901.4;Parent=Thaps269901;constitutive=1;rank=4 chr17 . CDS 222412 222612 . - 0 ID=Thaps269901;Parent=Thaps269901;rank=3 chr17 . exon 222412 222612 . - . ID=Thaps269901.3;Parent=Thaps269901;constitutive=1;rank=3 chr17 . CDS 222667 223054 . - 0 ID=Thaps269901;Parent=Thaps269901;rank=2 chr17 . exon 222667 223054 . - . ID=Thaps269901.2;Parent=Thaps269901;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 223079 223242 . - 0 ID=Thaps269901;Parent=Thaps269901;rank=1 chr17 . exon 223079 223242 . - . ID=Thaps269901.1;Parent=Thaps269901;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 228221 229174 . + . ID=Thaps38022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE15];external_name=Thaps38022;logic_name=jgi_thaps3 chr17 ensembl transcript 228221 229174 . + . ID=Thaps38022;Parent=Thaps38022;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 228221 228472 . + 0 ID=Thaps38022;Parent=Thaps38022;rank=1 chr17 . exon 228221 228472 . + . ID=Thaps38022.1;Parent=Thaps38022;constitutive=1;rank=1 chr17 . CDS 228563 229174 . + 0 ID=Thaps38022;Parent=Thaps38022;rank=2 chr17 . exon 228563 229174 . + . ID=Thaps38022.2;Parent=Thaps38022;constitutive=1;rank=2 chr17 ensembl protein_coding_gene 232245 233451 . + . ID=Thaps10616;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE17];external_name=Thaps10616;logic_name=jgi_thaps3 chr17 ensembl transcript 232245 233451 . + . ID=Thaps10616;Parent=Thaps10616;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 232245 232958 . + 0 ID=Thaps10616;Parent=Thaps10616;rank=1 chr17 . exon 232245 232958 . + . ID=Thaps10616.1;Parent=Thaps10616;constitutive=1;rank=1 chr17 . CDS 233054 233239 . + 0 ID=Thaps10616;Parent=Thaps10616;rank=2 chr17 . exon 233054 233239 . + . ID=Thaps10616.2;Parent=Thaps10616;constitutive=1;rank=2 chr17 . CDS 233329 233451 . + 0 ID=Thaps10616;Parent=Thaps10616;rank=3 chr17 . exon 233329 233451 . + . ID=Thaps10616.3;Parent=Thaps10616;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 239672 241633 . - . ID=Thaps10619;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE20];external_name=Thaps10619;logic_name=jgi_thaps3 chr17 ensembl transcript 239672 241633 . - . ID=Thaps10619;Parent=Thaps10619;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 239672 240615 . - 0 ID=Thaps10619;Parent=Thaps10619;rank=3 chr17 . exon 239672 240615 . - . ID=Thaps10619.3;Parent=Thaps10619;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 240804 241207 . - 0 ID=Thaps10619;Parent=Thaps10619;rank=2 chr17 . CDS 241338 241633 . - 0 ID=Thaps10619;Parent=Thaps10619;rank=1 chr17 ensembl protein_coding_gene 234876 236941 . - . ID=Thaps25239;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE18];external_name=Thaps25239;logic_name=jgi_thaps3 chr17 ensembl transcript 234876 236941 . - . ID=Thaps25239;Parent=Thaps25239;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 234876 236429 . - 0 ID=Thaps25239;Parent=Thaps25239;rank=2 chr17 . exon 234876 236429 . - . ID=Thaps25239.2;Parent=Thaps25239;constitutive=1;rank=2 chr17 . CDS 236516 236941 . - 0 ID=Thaps25239;Parent=Thaps25239;rank=1 chr17 . exon 236516 236941 . - . ID=Thaps25239.1;Parent=Thaps25239;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 237718 239019 . + . ID=Thaps25240;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE19];external_name=Thaps25240;logic_name=jgi_thaps3 chr17 ensembl transcript 237718 239019 . + . ID=Thaps25240;Parent=Thaps25240;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 237718 239019 . + 0 ID=Thaps25240;Parent=Thaps25240;rank=1 chr17 . exon 237718 239019 . + . ID=Thaps25240.1;Parent=Thaps25240;constitutive=1;rank=1 chr17 . repeat_region 242947 242955 . ? . description=dust chr17 . repeat_region 243735 243833 . ? . description=trf chr17 . repeat_region 244437 244484 . ? . description=dust chr17 . repeat_region 245437 245451 . ? . description=dust chr17 . repeat_region 249301 249333 . ? . description=dust chr17 . exon 240804 241207 . - . ID=Thaps10619.2;Parent=Thaps10619;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . exon 241338 241633 . - . ID=Thaps10619.1;Parent=Thaps10619;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 243243 245144 . - . ID=Thaps25241;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE21];external_name=Thaps25241;logic_name=jgi_thaps3 chr17 ensembl transcript 243243 245144 . - . ID=Thaps25241;Parent=Thaps25241;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 243243 245144 . - 0 ID=Thaps25241;Parent=Thaps25241;rank=1 chr17 . exon 243243 245144 . - . ID=Thaps25241.1;Parent=Thaps25241;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 245794 246516 . + . ID=Thaps25242;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE22];external_name=Thaps25242;logic_name=jgi_thaps3 chr17 ensembl transcript 245794 246516 . + . ID=Thaps25242;Parent=Thaps25242;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 245794 245802 . + 0 ID=Thaps25242;Parent=Thaps25242;rank=1 chr17 . exon 245794 245802 . + . ID=Thaps25242.1;Parent=Thaps25242;constitutive=1;rank=1 chr17 . CDS 246349 246516 . + 0 ID=Thaps25242;Parent=Thaps25242;rank=2 chr17 . exon 246349 246516 . + . ID=Thaps25242.2;Parent=Thaps25242;constitutive=1;rank=2 chr17 ensembl protein_coding_gene 247228 248122 . - . ID=Thaps25243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE23];external_name=Thaps25243;logic_name=jgi_thaps3 chr17 ensembl transcript 247228 248122 . - . ID=Thaps25243;Parent=Thaps25243;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 247228 247823 . - 0 ID=Thaps25243;Parent=Thaps25243;rank=2 chr17 . exon 247228 247823 . - . ID=Thaps25243.2;Parent=Thaps25243;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 247960 248122 . - 0 ID=Thaps25243;Parent=Thaps25243;rank=1 chr17 . exon 247960 248122 . - . ID=Thaps25243.1;Parent=Thaps25243;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 249710 250629 . + . ID=Thaps264438;biotype=protein_coding;description=Peroxisomal targeting signal receptor [Source:UniProtKB/TrEMBL%3BAcc:B8CE24];external_name=Thaps264438;logic_name=jgi_thaps3 chr17 ensembl transcript 249710 250629 . + . ID=Thaps264438;Parent=Thaps264438;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 249710 250091 . + 0 ID=Thaps264438;Parent=Thaps264438;rank=1 chr17 . exon 249710 250091 . + . ID=Thaps264438.1;Parent=Thaps264438;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 250152 250629 . + 0 ID=Thaps264438;Parent=Thaps264438;rank=2 chr17 ensembl protein_coding_gene 250972 252558 . + . ID=Thaps10624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE25];external_name=Thaps10624;logic_name=jgi_thaps3 chr17 ensembl transcript 250972 252558 . + . ID=Thaps10624;Parent=Thaps10624;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 250972 252558 . + 0 ID=Thaps10624;Parent=Thaps10624;rank=1 chr17 . exon 250972 252558 . + . ID=Thaps10624.1;Parent=Thaps10624;constitutive=1;rank=1 chr17 . exon 250152 250629 . + . ID=Thaps264438.2;Parent=Thaps264438;constitutive=1;ensembl_end_phase=1;rank=2 chr17 ensembl protein_coding_gene 252637 253555 . - . ID=Thaps37965;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE26];external_name=Thaps37965;logic_name=jgi_thaps3 chr17 ensembl transcript 252637 253555 . - . ID=Thaps37965;Parent=Thaps37965;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 252637 253187 . - 0 ID=Thaps37965;Parent=Thaps37965;rank=2 chr17 . exon 252637 253187 . - . ID=Thaps37965.2;Parent=Thaps37965;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 253327 253555 . - 0 ID=Thaps37965;Parent=Thaps37965;rank=1 chr17 . exon 253327 253555 . - . ID=Thaps37965.1;Parent=Thaps37965;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . repeat_region 263158 263197 . ? . description=trf chr17 . repeat_region 269702 269807 . ? . description=trf chr17 ensembl protein_coding_gene 260090 261669 . - . ID=Thaps10626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE27];external_name=Thaps10626;logic_name=jgi_thaps3 chr17 ensembl transcript 260090 261669 . - . ID=Thaps10626;Parent=Thaps10626;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 260090 261209 . - 0 ID=Thaps10626;Parent=Thaps10626;rank=2 chr17 . exon 260090 261209 . - . ID=Thaps10626.2;Parent=Thaps10626;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 261293 261669 . - 0 ID=Thaps10626;Parent=Thaps10626;rank=1 chr17 . exon 261293 261669 . - . ID=Thaps10626.1;Parent=Thaps10626;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 265590 267739 . - . ID=Thaps10628;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE29];external_name=Thaps10628;logic_name=jgi_thaps3 chr17 ensembl transcript 265590 267739 . - . ID=Thaps10628;Parent=Thaps10628;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 265590 266177 . - 0 ID=Thaps10628;Parent=Thaps10628;rank=2 chr17 . exon 265590 266177 . - . ID=Thaps10628.2;Parent=Thaps10628;constitutive=1;rank=2 chr17 . CDS 266267 267739 . - 0 ID=Thaps10628;Parent=Thaps10628;rank=1 chr17 . exon 266267 267739 . - . ID=Thaps10628.1;Parent=Thaps10628;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 268112 269859 . + . ID=Thaps10629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE30];external_name=Thaps10629;logic_name=jgi_thaps3 chr17 ensembl transcript 268112 269859 . + . ID=Thaps10629;Parent=Thaps10629;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 268112 268280 . + 0 ID=Thaps10629;Parent=Thaps10629;rank=1 chr17 . exon 268112 268280 . + . ID=Thaps10629.1;Parent=Thaps10629;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 268325 269859 . + 0 ID=Thaps10629;Parent=Thaps10629;rank=2 chr17 . exon 268325 269859 . + . ID=Thaps10629.2;Parent=Thaps10629;constitutive=1;ensembl_end_phase=2;rank=2 chr17 ensembl protein_coding_gene 262485 265257 . + . ID=Thaps25246;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE28];external_name=Thaps25246;logic_name=jgi_thaps3 chr17 ensembl transcript 262485 265257 . + . ID=Thaps25246;Parent=Thaps25246;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 262485 264138 . + 0 ID=Thaps25246;Parent=Thaps25246;rank=1 chr17 . exon 262485 264138 . + . ID=Thaps25246.1;Parent=Thaps25246;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 264268 264389 . + 0 ID=Thaps25246;Parent=Thaps25246;rank=2 chr17 . exon 264268 264389 . + . ID=Thaps25246.2;Parent=Thaps25246;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 264526 265257 . + 0 ID=Thaps25246;Parent=Thaps25246;rank=3 chr17 . exon 264526 265257 . + . ID=Thaps25246.3;Parent=Thaps25246;constitutive=1;rank=3 chr17 . repeat_region 271013 271044 . ? . description=dust chr17 ensembl protein_coding_gene 277868 278065 . + . ID=Thaps19937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE34];external_name=Thaps19937;logic_name=jgi_thaps3 chr17 ensembl transcript 277868 278065 . + . ID=Thaps19937;Parent=Thaps19937;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 277868 278065 . + 0 ID=Thaps19937;Parent=Thaps19937;rank=1 chr17 . exon 277868 278065 . + . ID=Thaps19937.1;Parent=Thaps19937;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 270051 270937 . - . ID=Thaps25247;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE31];external_name=Thaps25247;logic_name=jgi_thaps3 chr17 ensembl transcript 270051 270937 . - . ID=Thaps25247;Parent=Thaps25247;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 270051 270280 . - 0 ID=Thaps25247;Parent=Thaps25247;rank=2 chr17 . exon 270051 270280 . - . ID=Thaps25247.2;Parent=Thaps25247;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 270367 270937 . - 0 ID=Thaps25247;Parent=Thaps25247;rank=1 chr17 . exon 270367 270937 . - . ID=Thaps25247.1;Parent=Thaps25247;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 273298 277418 . - . ID=Thaps25248;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE33];external_name=Thaps25248;logic_name=jgi_thaps3 chr17 ensembl transcript 273298 277418 . - . ID=Thaps25248;Parent=Thaps25248;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 273298 273801 . - 0 ID=Thaps25248;Parent=Thaps25248;rank=4 chr17 . exon 273298 273801 . - . ID=Thaps25248.4;Parent=Thaps25248;constitutive=1;rank=4 chr17 . CDS 273881 275126 . - 0 ID=Thaps25248;Parent=Thaps25248;rank=3 chr17 . exon 273881 275126 . - . ID=Thaps25248.3;Parent=Thaps25248;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 275200 275300 . - 0 ID=Thaps25248;Parent=Thaps25248;rank=2 chr17 . exon 275200 275300 . - . ID=Thaps25248.2;Parent=Thaps25248;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 275451 277418 . - 0 ID=Thaps25248;Parent=Thaps25248;rank=1 chr17 . exon 275451 277418 . - . ID=Thaps25248.1;Parent=Thaps25248;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 271344 272877 . + . ID=Thaps264439;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE32];external_name=Thaps264439;logic_name=jgi_thaps3 chr17 ensembl transcript 271344 272877 . + . ID=Thaps264439;Parent=Thaps264439;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 271344 271484 . + 0 ID=Thaps264439;Parent=Thaps264439;rank=1 chr17 . exon 271344 271484 . + . ID=Thaps264439.1;Parent=Thaps264439;constitutive=1;rank=1 chr17 . CDS 271562 271655 . + 0 ID=Thaps264439;Parent=Thaps264439;rank=2 chr17 . exon 271562 271655 . + . ID=Thaps264439.2;Parent=Thaps264439;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 271668 272507 . + 0 ID=Thaps264439;Parent=Thaps264439;rank=3 chr17 . exon 271668 272507 . + . ID=Thaps264439.3;Parent=Thaps264439;constitutive=1;rank=3 chr17 . CDS 272583 272636 . + 0 ID=Thaps264439;Parent=Thaps264439;rank=4 chr17 . exon 272583 272636 . + . ID=Thaps264439.4;Parent=Thaps264439;constitutive=1;rank=4 chr17 . CDS 272714 272877 . + 0 ID=Thaps264439;Parent=Thaps264439;rank=5 chr17 . exon 272714 272877 . + . ID=Thaps264439.5;Parent=Thaps264439;constitutive=1;ensembl_end_phase=2;rank=5 chr17 ensembl protein_coding_gene 278549 280409 . - . ID=Thaps264440;biotype=protein_coding;description=Mercuric reductase [Source:UniProtKB/TrEMBL%3BAcc:B8CE35];external_name=Thaps264440;logic_name=jgi_thaps3 chr17 ensembl transcript 278549 280409 . - . ID=Thaps264440;Parent=Thaps264440;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 278549 279807 . - 0 ID=Thaps264440;Parent=Thaps264440;rank=3 chr17 . exon 278549 279807 . - . ID=Thaps264440.3;Parent=Thaps264440;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 279868 280023 . - 0 ID=Thaps264440;Parent=Thaps264440;rank=2 chr17 . exon 279868 280023 . - . ID=Thaps264440.2;Parent=Thaps264440;constitutive=1;rank=2 chr17 . CDS 280173 280409 . - 0 ID=Thaps264440;Parent=Thaps264440;rank=1 chr17 ensembl protein_coding_gene 283164 284468 . - . ID=Thaps10635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE37];external_name=Thaps10635;logic_name=jgi_thaps3 chr17 ensembl transcript 283164 284468 . - . ID=Thaps10635;Parent=Thaps10635;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 283164 283619 . - 0 ID=Thaps10635;Parent=Thaps10635;rank=2 chr17 . exon 283164 283619 . - . ID=Thaps10635.2;Parent=Thaps10635;constitutive=1;rank=2 chr17 . CDS 283710 284468 . - 0 ID=Thaps10635;Parent=Thaps10635;rank=1 chr17 . exon 283710 284468 . - . ID=Thaps10635.1;Parent=Thaps10635;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 281157 283070 . + . ID=Thaps25249;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE36];external_name=Thaps25249;logic_name=jgi_thaps3 chr17 ensembl transcript 281157 283070 . + . ID=Thaps25249;Parent=Thaps25249;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 281157 283070 . + 0 ID=Thaps25249;Parent=Thaps25249;rank=1 chr17 . exon 281157 283070 . + . ID=Thaps25249.1;Parent=Thaps25249;constitutive=1;rank=1 chr17 . exon 280173 280409 . - . ID=Thaps264440.1;Parent=Thaps264440;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 285844 287208 . + . ID=Thaps264441;biotype=protein_coding;description=O-linked GlcNAc transferase [Source:UniProtKB/TrEMBL%3BAcc:B8CE38];external_name=Thaps264441;logic_name=jgi_thaps3 chr17 ensembl transcript 285844 287208 . + . ID=Thaps264441;Parent=Thaps264441;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 285844 286137 . + 0 ID=Thaps264441;Parent=Thaps264441;rank=1 chr17 . exon 285844 286137 . + . ID=Thaps264441.1;Parent=Thaps264441;constitutive=1;rank=1 chr17 . CDS 286186 286854 . + 0 ID=Thaps264441;Parent=Thaps264441;rank=2 chr17 . exon 286186 286854 . + . ID=Thaps264441.2;Parent=Thaps264441;constitutive=1;rank=2 chr17 . CDS 286930 287208 . + 0 ID=Thaps264441;Parent=Thaps264441;rank=3 chr17 . exon 286930 287208 . + . ID=Thaps264441.3;Parent=Thaps264441;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 287359 288870 . - . ID=Thaps42646;biotype=protein_coding;description=Topoisomerase [Source:UniProtKB/TrEMBL%3BAcc:B8CE39];external_name=Thaps42646;logic_name=jgi_thaps3 chr17 ensembl transcript 287359 288870 . - . ID=Thaps42646;Parent=Thaps42646;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 287359 287590 . - 0 ID=Thaps42646;Parent=Thaps42646;rank=6 chr17 . exon 287359 287590 . - . ID=Thaps42646.6;Parent=Thaps42646;constitutive=1;ensembl_end_phase=1;rank=6 chr17 . CDS 287679 287886 . - 0 ID=Thaps42646;Parent=Thaps42646;rank=5 chr17 . exon 287679 287886 . - . ID=Thaps42646.5;Parent=Thaps42646;constitutive=1;ensembl_end_phase=1;rank=5 chr17 . CDS 287978 288026 . - 0 ID=Thaps42646;Parent=Thaps42646;rank=4 chr17 . exon 287978 288026 . - . ID=Thaps42646.4;Parent=Thaps42646;constitutive=1;ensembl_end_phase=1;rank=4 chr17 . CDS 288132 288512 . - 0 ID=Thaps42646;Parent=Thaps42646;rank=3 chr17 . exon 288132 288512 . - . ID=Thaps42646.3;Parent=Thaps42646;constitutive=1;rank=3 chr17 . CDS 288602 288715 . - 0 ID=Thaps42646;Parent=Thaps42646;rank=2 chr17 . exon 288602 288715 . - . ID=Thaps42646.2;Parent=Thaps42646;constitutive=1;rank=2 chr17 . CDS 288796 288870 . - 0 ID=Thaps42646;Parent=Thaps42646;rank=1 chr17 . exon 288796 288870 . - . ID=Thaps42646.1;Parent=Thaps42646;constitutive=1;rank=1 chr17 . repeat_region 292005 292203 . - . description=TE1A_TP chr17 . repeat_region 292575 292770 . - . description=TE1_TP chr17 . repeat_region 292814 292825 . ? . description=dust chr17 . repeat_region 292980 292987 . ? . description=dust chr17 ensembl protein_coding_gene 293611 294487 . + . ID=Thaps10638;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE40];external_name=Thaps10638;logic_name=jgi_thaps3 chr17 ensembl transcript 293611 294487 . + . ID=Thaps10638;Parent=Thaps10638;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 293611 293808 . + 0 ID=Thaps10638;Parent=Thaps10638;rank=1 chr17 . exon 293611 293808 . + . ID=Thaps10638.1;Parent=Thaps10638;constitutive=1;rank=1 chr17 . CDS 293828 293971 . + 0 ID=Thaps10638;Parent=Thaps10638;rank=2 chr17 . exon 293828 293971 . + . ID=Thaps10638.2;Parent=Thaps10638;constitutive=1;rank=2 chr17 . CDS 294097 294296 . + 0 ID=Thaps10638;Parent=Thaps10638;rank=3 chr17 . exon 294097 294296 . + . ID=Thaps10638.3;Parent=Thaps10638;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 294337 294487 . + 0 ID=Thaps10638;Parent=Thaps10638;rank=4 chr17 . exon 294337 294487 . + . ID=Thaps10638.4;Parent=Thaps10638;constitutive=1;ensembl_end_phase=1;rank=4 chr17 ensembl protein_coding_gene 295167 296501 . + . ID=Thaps25252;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE41];external_name=Thaps25252;logic_name=jgi_thaps3 chr17 ensembl transcript 295167 296501 . + . ID=Thaps25252;Parent=Thaps25252;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 295167 296501 . + 0 ID=Thaps25252;Parent=Thaps25252;rank=1 chr17 . exon 295167 296501 . + . ID=Thaps25252.1;Parent=Thaps25252;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 298092 301792 . + . ID=Thaps269908;biotype=protein_coding;description=Pyruvate carboxylase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE42];external_name=Thaps269908;logic_name=jgi_thaps3 chr17 ensembl transcript 298092 301792 . + . ID=Thaps269908;Parent=Thaps269908;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 298092 298964 . + 0 ID=Thaps269908;Parent=Thaps269908;rank=1 chr17 . exon 298092 298964 . + . ID=Thaps269908.1;Parent=Thaps269908;constitutive=1;rank=1 chr17 . CDS 299076 299557 . + 0 ID=Thaps269908;Parent=Thaps269908;rank=2 chr17 . exon 299076 299557 . + . ID=Thaps269908.2;Parent=Thaps269908;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 299591 300501 . + 0 ID=Thaps269908;Parent=Thaps269908;rank=3 chr17 . exon 299591 300501 . + . ID=Thaps269908.3;Parent=Thaps269908;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 300591 301792 . + 0 ID=Thaps269908;Parent=Thaps269908;rank=4 chr17 ensembl protein_coding_gene 302000 304176 . - . ID=Thaps10641;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE43];external_name=Thaps10641;logic_name=jgi_thaps3 chr17 ensembl transcript 302000 304176 . - . ID=Thaps10641;Parent=Thaps10641;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 302000 302374 . - 0 ID=Thaps10641;Parent=Thaps10641;rank=3 chr17 . exon 302000 302374 . - . ID=Thaps10641.3;Parent=Thaps10641;constitutive=1;rank=3 chr17 . CDS 302459 303733 . - 0 ID=Thaps10641;Parent=Thaps10641;rank=2 chr17 . exon 302459 303733 . - . ID=Thaps10641.2;Parent=Thaps10641;constitutive=1;rank=2 chr17 . CDS 303781 304176 . - 0 ID=Thaps10641;Parent=Thaps10641;rank=1 chr17 . exon 303781 304176 . - . ID=Thaps10641.1;Parent=Thaps10641;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 304430 305908 . + . ID=Thaps25254;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE44];external_name=Thaps25254;logic_name=jgi_thaps3 chr17 ensembl transcript 304430 305908 . + . ID=Thaps25254;Parent=Thaps25254;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 304430 305908 . + 0 ID=Thaps25254;Parent=Thaps25254;rank=1 chr17 . exon 304430 305908 . + . ID=Thaps25254.1;Parent=Thaps25254;constitutive=1;rank=1 chr17 . exon 300591 301792 . + . ID=Thaps269908.4;Parent=Thaps269908;constitutive=1;ensembl_end_phase=2;rank=4 chr17 ensembl protein_coding_gene 308993 310184 . - . ID=Thaps37867;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE46];external_name=Thaps37867;logic_name=jgi_thaps3 chr17 ensembl transcript 308993 310184 . - . ID=Thaps37867;Parent=Thaps37867;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 308993 309171 . - 0 ID=Thaps37867;Parent=Thaps37867;rank=4 chr17 . exon 308993 309171 . - . ID=Thaps37867.4;Parent=Thaps37867;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 309272 309303 . - 0 ID=Thaps37867;Parent=Thaps37867;rank=3 chr17 . exon 309272 309303 . - . ID=Thaps37867.3;Parent=Thaps37867;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 309384 309461 . - 0 ID=Thaps37867;Parent=Thaps37867;rank=2 chr17 . exon 309384 309461 . - . ID=Thaps37867.2;Parent=Thaps37867;constitutive=1;rank=2 chr17 . CDS 309544 310184 . - 0 ID=Thaps37867;Parent=Thaps37867;rank=1 chr17 . exon 309544 310184 . - . ID=Thaps37867.1;Parent=Thaps37867;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 307342 308910 . + . ID=Thaps42652;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE45];external_name=Thaps42652;logic_name=jgi_thaps3 chr17 ensembl transcript 307342 308910 . + . ID=Thaps42652;Parent=Thaps42652;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 307342 307365 . + 0 ID=Thaps42652;Parent=Thaps42652;rank=1 chr17 . exon 307342 307365 . + . ID=Thaps42652.1;Parent=Thaps42652;constitutive=1;rank=1 chr17 . CDS 307506 307638 . + 0 ID=Thaps42652;Parent=Thaps42652;rank=2 chr17 . exon 307506 307638 . + . ID=Thaps42652.2;Parent=Thaps42652;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 307726 308771 . + 0 ID=Thaps42652;Parent=Thaps42652;rank=3 chr17 . exon 307726 308771 . + . ID=Thaps42652.3;Parent=Thaps42652;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 308854 308910 . + 0 ID=Thaps42652;Parent=Thaps42652;rank=4 chr17 . exon 308854 308910 . + . ID=Thaps42652.4;Parent=Thaps42652;constitutive=1;rank=4 chr17 . repeat_region 312471 312478 . ? . description=dust chr17 . repeat_region 316013 316154 . ? . description=trf chr17 . repeat_region 317567 317840 . ? . description=trf chr17 ensembl protein_coding_gene 314890 320104 . + . ID=Thaps10647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE49];external_name=Thaps10647;logic_name=jgi_thaps3 chr17 ensembl transcript 314890 320104 . + . ID=Thaps10647;Parent=Thaps10647;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 314890 316245 . + 0 ID=Thaps10647;Parent=Thaps10647;rank=1 chr17 . exon 314890 316245 . + . ID=Thaps10647.1;Parent=Thaps10647;constitutive=1;rank=1 chr17 . CDS 316349 318207 . + 0 ID=Thaps10647;Parent=Thaps10647;rank=2 chr17 . exon 316349 318207 . + . ID=Thaps10647.2;Parent=Thaps10647;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 318305 318501 . + 0 ID=Thaps10647;Parent=Thaps10647;rank=3 chr17 . exon 318305 318501 . + . ID=Thaps10647.3;Parent=Thaps10647;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 318615 318881 . + 0 ID=Thaps10647;Parent=Thaps10647;rank=4 chr17 . exon 318615 318881 . + . ID=Thaps10647.4;Parent=Thaps10647;constitutive=1;rank=4 chr17 . CDS 318971 319044 . + 0 ID=Thaps10647;Parent=Thaps10647;rank=5 chr17 . exon 318971 319044 . + . ID=Thaps10647.5;Parent=Thaps10647;constitutive=1;ensembl_end_phase=2;rank=5 chr17 . CDS 319127 320104 . + 0 ID=Thaps10647;Parent=Thaps10647;rank=6 chr17 . exon 319127 320104 . + . ID=Thaps10647.6;Parent=Thaps10647;constitutive=1;rank=6 chr17 ensembl protein_coding_gene 314069 314341 . - . ID=Thaps37962;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE48];external_name=Thaps37962;logic_name=jgi_thaps3 chr17 ensembl transcript 314069 314341 . - . ID=Thaps37962;Parent=Thaps37962;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 314069 314341 . - 0 ID=Thaps37962;Parent=Thaps37962;rank=1 chr17 . exon 314069 314341 . - . ID=Thaps37962.1;Parent=Thaps37962;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 311398 312231 . + . ID=Thaps37995;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE47];external_name=Thaps37995;logic_name=jgi_thaps3 chr17 ensembl transcript 311398 312231 . + . ID=Thaps37995;Parent=Thaps37995;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 311398 312231 . + 0 ID=Thaps37995;Parent=Thaps37995;rank=1 chr17 . exon 311398 312231 . + . ID=Thaps37995.1;Parent=Thaps37995;constitutive=1;rank=1 chr17 . biological_region 328778 328783 0.999 - . logic_name=eponine chr17 ensembl protein_coding_gene 320839 323269 . + . ID=Thaps26436;biotype=protein_coding;description=Oligopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8CE50];external_name=Thaps26436;logic_name=jgi_thaps3 chr17 ensembl transcript 320839 323269 . + . ID=Thaps26436;Parent=Thaps26436;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 320839 321250 . + 0 ID=Thaps26436;Parent=Thaps26436;rank=1 chr17 . exon 320839 321250 . + . ID=Thaps26436.1;Parent=Thaps26436;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 321335 321709 . + 0 ID=Thaps26436;Parent=Thaps26436;rank=2 chr17 . exon 321335 321709 . + . ID=Thaps26436.2;Parent=Thaps26436;constitutive=1;rank=2 chr17 . CDS 321734 322452 . + 0 ID=Thaps26436;Parent=Thaps26436;rank=3 chr17 . exon 321734 322452 . + . ID=Thaps26436.3;Parent=Thaps26436;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 322542 323084 . + 0 ID=Thaps26436;Parent=Thaps26436;rank=4 chr17 . exon 322542 323084 . + . ID=Thaps26436.4;Parent=Thaps26436;constitutive=1;rank=4 chr17 . CDS 323168 323269 . + 0 ID=Thaps26436;Parent=Thaps26436;rank=5 chr17 . exon 323168 323269 . + . ID=Thaps26436.5;Parent=Thaps26436;constitutive=1;rank=5 chr17 ensembl protein_coding_gene 326386 327187 . + . ID=Thaps37980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE52];external_name=Thaps37980;logic_name=jgi_thaps3 chr17 ensembl transcript 326386 327187 . + . ID=Thaps37980;Parent=Thaps37980;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 326386 326702 . + 0 ID=Thaps37980;Parent=Thaps37980;rank=1 chr17 . exon 326386 326702 . + . ID=Thaps37980.1;Parent=Thaps37980;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 326872 327187 . + 0 ID=Thaps37980;Parent=Thaps37980;rank=2 chr17 . exon 326872 327187 . + . ID=Thaps37980.2;Parent=Thaps37980;constitutive=1;ensembl_end_phase=1;rank=2 chr17 ensembl protein_coding_gene 324357 325529 . - . ID=Thaps42660;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE51];external_name=Thaps42660;logic_name=jgi_thaps3 chr17 ensembl transcript 324357 325529 . - . ID=Thaps42660;Parent=Thaps42660;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 324357 325065 . - 0 ID=Thaps42660;Parent=Thaps42660;rank=2 chr17 . exon 324357 325065 . - . ID=Thaps42660.2;Parent=Thaps42660;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 325210 325529 . - 0 ID=Thaps42660;Parent=Thaps42660;rank=1 chr17 . exon 325210 325529 . - . ID=Thaps42660.1;Parent=Thaps42660;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 328370 329860 . + . ID=Thaps789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE53];external_name=Thaps789;logic_name=jgi_thaps3 chr17 ensembl transcript 328370 329860 . + . ID=Thaps789;Parent=Thaps789;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 328370 329024 . + 0 ID=Thaps789;Parent=Thaps789;rank=1 chr17 . exon 328370 329024 . + . ID=Thaps789.1;Parent=Thaps789;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 329133 329860 . + 0 ID=Thaps789;Parent=Thaps789;rank=2 chr17 . exon 329133 329860 . + . ID=Thaps789.2;Parent=Thaps789;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . repeat_region 335400 335418 . ? . description=dust chr17 . repeat_region 336679 336709 . ? . description=dust chr17 . repeat_region 339664 339683 . ? . description=trf chr17 ensembl protein_coding_gene 338308 339276 . + . ID=Thaps17657;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE55];external_name=Thaps17657;logic_name=jgi_thaps3 chr17 ensembl transcript 338308 339276 . + . ID=Thaps17657;Parent=Thaps17657;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 338308 338540 . + 0 ID=Thaps17657;Parent=Thaps17657;rank=1 chr17 . exon 338308 338540 . + . ID=Thaps17657.1;Parent=Thaps17657;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 338718 338887 . + 0 ID=Thaps17657;Parent=Thaps17657;rank=2 chr17 . exon 338718 338887 . + . ID=Thaps17657.2;Parent=Thaps17657;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 338984 339276 . + 0 ID=Thaps17657;Parent=Thaps17657;rank=3 chr17 . exon 338984 339276 . + . ID=Thaps17657.3;Parent=Thaps17657;constitutive=1;ensembl_end_phase=2;rank=3 chr17 ensembl protein_coding_gene 330013 330270 . - . ID=Thaps20248;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE54];external_name=Thaps20248;logic_name=jgi_thaps3 chr17 ensembl transcript 330013 330270 . - . ID=Thaps20248;Parent=Thaps20248;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 330013 330270 . - 0 ID=Thaps20248;Parent=Thaps20248;rank=1 chr17 . exon 330013 330270 . - . ID=Thaps20248.1;Parent=Thaps20248;constitutive=1;rank=1 chr17 . biological_region 347144 347150 0.999 + . logic_name=eponine chr17 ensembl protein_coding_gene 340282 341508 . - . ID=Thaps10654;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE56];external_name=Thaps10654;logic_name=jgi_thaps3 chr17 ensembl transcript 340282 341508 . - . ID=Thaps10654;Parent=Thaps10654;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 340282 341508 . - 0 ID=Thaps10654;Parent=Thaps10654;rank=1 chr17 . exon 340282 341508 . - . ID=Thaps10654.1;Parent=Thaps10654;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 342006 343787 . + . ID=Thaps25261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE57];external_name=Thaps25261;logic_name=jgi_thaps3 chr17 ensembl transcript 342006 343787 . + . ID=Thaps25261;Parent=Thaps25261;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 342006 343787 . + 0 ID=Thaps25261;Parent=Thaps25261;rank=1 chr17 . exon 342006 343787 . + . ID=Thaps25261.1;Parent=Thaps25261;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 345319 346131 . - . ID=Thaps25262;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE59];external_name=Thaps25262;logic_name=jgi_thaps3 chr17 ensembl transcript 345319 346131 . - . ID=Thaps25262;Parent=Thaps25262;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 345319 346131 . - 0 ID=Thaps25262;Parent=Thaps25262;rank=1 chr17 . exon 345319 346131 . - . ID=Thaps25262.1;Parent=Thaps25262;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 347176 349743 . + . ID=Thaps25263;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE60];external_name=Thaps25263;logic_name=jgi_thaps3 chr17 ensembl transcript 347176 349743 . + . ID=Thaps25263;Parent=Thaps25263;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 347176 349743 . + 0 ID=Thaps25263;Parent=Thaps25263;rank=1 chr17 . exon 347176 349743 . + . ID=Thaps25263.1;Parent=Thaps25263;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 344020 344274 . + . ID=Thaps37923;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE58];external_name=Thaps37923;logic_name=jgi_thaps3 chr17 ensembl transcript 344020 344274 . + . ID=Thaps37923;Parent=Thaps37923;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 344020 344274 . + 0 ID=Thaps37923;Parent=Thaps37923;rank=1 chr17 . exon 344020 344274 . + . ID=Thaps37923.1;Parent=Thaps37923;constitutive=1;rank=1 chr17 . repeat_region 354409 354419 . ? . description=dust chr17 . repeat_region 354854 354914 . ? . description=trf chr17 . repeat_region 354992 355024 . ? . description=trf chr17 . repeat_region 354992 355024 . ? . description=dust chr17 . repeat_region 358056 358105 . ? . description=dust chr17 . repeat_region 358056 358110 . ? . description=trf chr17 . repeat_region 358721 358751 . ? . description=dust chr17 . repeat_region 358721 358755 . ? . description=trf chr17 . repeat_region 359333 359359 . ? . description=trf chr17 . repeat_region 359454 359484 . ? . description=trf chr17 ensembl protein_coding_gene 350794 351738 . - . ID=Thaps10659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE61];external_name=Thaps10659;logic_name=jgi_thaps3 chr17 ensembl transcript 350794 351738 . - . ID=Thaps10659;Parent=Thaps10659;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 350794 351738 . - 0 ID=Thaps10659;Parent=Thaps10659;rank=1 chr17 . exon 350794 351738 . - . ID=Thaps10659.1;Parent=Thaps10659;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 354795 356939 . + . ID=Thaps10661;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE63];external_name=Thaps10661;logic_name=jgi_thaps3 chr17 ensembl transcript 354795 356939 . + . ID=Thaps10661;Parent=Thaps10661;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 354795 355178 . + 0 ID=Thaps10661;Parent=Thaps10661;rank=1 chr17 . exon 354795 355178 . + . ID=Thaps10661.1;Parent=Thaps10661;constitutive=1;rank=1 chr17 . CDS 355329 356939 . + 0 ID=Thaps10661;Parent=Thaps10661;rank=2 chr17 . exon 355329 356939 . + . ID=Thaps10661.2;Parent=Thaps10661;constitutive=1;rank=2 chr17 ensembl protein_coding_gene 352321 353982 . + . ID=Thaps25264;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE62];external_name=Thaps25264;logic_name=jgi_thaps3 chr17 ensembl transcript 352321 353982 . + . ID=Thaps25264;Parent=Thaps25264;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 352321 352770 . + 0 ID=Thaps25264;Parent=Thaps25264;rank=1 chr17 . exon 352321 352770 . + . ID=Thaps25264.1;Parent=Thaps25264;constitutive=1;rank=1 chr17 . CDS 352876 353982 . + 0 ID=Thaps25264;Parent=Thaps25264;rank=2 chr17 . exon 352876 353982 . + . ID=Thaps25264.2;Parent=Thaps25264;constitutive=1;rank=2 chr17 ensembl protein_coding_gene 358568 363201 . + . ID=Thaps25267;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE65];external_name=Thaps25267;logic_name=jgi_thaps3 chr17 ensembl transcript 358568 363201 . + . ID=Thaps25267;Parent=Thaps25267;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 358568 359249 . + 0 ID=Thaps25267;Parent=Thaps25267;rank=1 chr17 . exon 358568 359249 . + . ID=Thaps25267.1;Parent=Thaps25267;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 359339 363201 . + 0 ID=Thaps25267;Parent=Thaps25267;rank=2 chr17 . exon 359339 363201 . + . ID=Thaps25267.2;Parent=Thaps25267;constitutive=1;ensembl_end_phase=2;rank=2 chr17 ensembl protein_coding_gene 357488 357940 . - . ID=Thaps37881;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE64];external_name=Thaps37881;logic_name=jgi_thaps3 chr17 ensembl transcript 357488 357940 . - . ID=Thaps37881;Parent=Thaps37881;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 357488 357940 . - 0 ID=Thaps37881;Parent=Thaps37881;rank=1 chr17 . exon 357488 357940 . - . ID=Thaps37881.1;Parent=Thaps37881;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 365053 366322 . - . ID=Thaps264451;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE66];external_name=Thaps264451;logic_name=jgi_thaps3 chr17 ensembl transcript 365053 366322 . - . ID=Thaps264451;Parent=Thaps264451;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 365053 365178 . - 0 ID=Thaps264451;Parent=Thaps264451;rank=3 chr17 . exon 365053 365178 . - . ID=Thaps264451.3;Parent=Thaps264451;constitutive=1;rank=3 chr17 . CDS 365293 366020 . - 0 ID=Thaps264451;Parent=Thaps264451;rank=2 chr17 . exon 365293 366020 . - . ID=Thaps264451.2;Parent=Thaps264451;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 366187 366322 . - 0 ID=Thaps264451;Parent=Thaps264451;rank=1 chr17 . exon 366187 366322 . - . ID=Thaps264451.1;Parent=Thaps264451;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 369870 370624 . + . ID=Thaps37911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE68];external_name=Thaps37911;logic_name=jgi_thaps3 chr17 ensembl transcript 369870 370624 . + . ID=Thaps37911;Parent=Thaps37911;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 369870 369966 . + 0 ID=Thaps37911;Parent=Thaps37911;rank=1 chr17 . exon 369870 369966 . + . ID=Thaps37911.1;Parent=Thaps37911;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 370233 370342 . + 0 ID=Thaps37911;Parent=Thaps37911;rank=2 chr17 . CDS 370430 370624 . + 0 ID=Thaps37911;Parent=Thaps37911;rank=3 chr17 ensembl protein_coding_gene 368860 369282 . + . ID=Thaps37963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE67];external_name=Thaps37963;logic_name=jgi_thaps3 chr17 ensembl transcript 368860 369282 . + . ID=Thaps37963;Parent=Thaps37963;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 368860 369282 . + 0 ID=Thaps37963;Parent=Thaps37963;rank=1 chr17 . exon 368860 369282 . + . ID=Thaps37963.1;Parent=Thaps37963;constitutive=1;rank=1 chr17 . repeat_region 375515 375550 . ? . description=dust chr17 . repeat_region 375736 375782 . ? . description=dust chr17 . repeat_region 375762 375782 . ? . description=trf chr17 ensembl protein_coding_gene 371101 374454 . - . ID=Thaps25270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE69];external_name=Thaps25270;logic_name=jgi_thaps3 chr17 ensembl transcript 371101 374454 . - . ID=Thaps25270;Parent=Thaps25270;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 371101 374454 . - 0 ID=Thaps25270;Parent=Thaps25270;rank=1 chr17 . exon 371101 374454 . - . ID=Thaps25270.1;Parent=Thaps25270;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 377541 379882 . - . ID=Thaps25272;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE71];external_name=Thaps25272;logic_name=jgi_thaps3 chr17 ensembl transcript 377541 379882 . - . ID=Thaps25272;Parent=Thaps25272;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 377541 378090 . - 0 ID=Thaps25272;Parent=Thaps25272;rank=4 chr17 . exon 377541 378090 . - . ID=Thaps25272.4;Parent=Thaps25272;constitutive=1;ensembl_end_phase=1;rank=4 chr17 . CDS 378180 378268 . - 0 ID=Thaps25272;Parent=Thaps25272;rank=3 chr17 . exon 378180 378268 . - . ID=Thaps25272.3;Parent=Thaps25272;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 378357 379796 . - 0 ID=Thaps25272;Parent=Thaps25272;rank=2 chr17 . exon 378357 379796 . - . ID=Thaps25272.2;Parent=Thaps25272;constitutive=1;rank=2 chr17 . CDS 379832 379882 . - 0 ID=Thaps25272;Parent=Thaps25272;rank=1 chr17 . exon 379832 379882 . - . ID=Thaps25272.1;Parent=Thaps25272;constitutive=1;rank=1 chr17 . exon 370233 370342 . + . ID=Thaps37911.2;Parent=Thaps37911;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . exon 370430 370624 . + . ID=Thaps37911.3;Parent=Thaps37911;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 375113 375541 . - . ID=Thaps38006;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE70];external_name=Thaps38006;logic_name=jgi_thaps3 chr17 ensembl transcript 375113 375541 . - . ID=Thaps38006;Parent=Thaps38006;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 375113 375541 . - 0 ID=Thaps38006;Parent=Thaps38006;rank=1 chr17 . exon 375113 375541 . - . ID=Thaps38006.1;Parent=Thaps38006;constitutive=1;rank=1 chr17 . biological_region 389153 389157 0.999 - . logic_name=eponine chr17 ensembl protein_coding_gene 383205 385199 . + . ID=Thaps10671;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE72];external_name=Thaps10671;logic_name=jgi_thaps3 chr17 ensembl transcript 383205 385199 . + . ID=Thaps10671;Parent=Thaps10671;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 383205 385199 . + 0 ID=Thaps10671;Parent=Thaps10671;rank=1 chr17 . exon 383205 385199 . + . ID=Thaps10671.1;Parent=Thaps10671;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 386563 387423 . + . ID=Thaps10673;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE74];external_name=Thaps10673;logic_name=jgi_thaps3 chr17 ensembl transcript 386563 387423 . + . ID=Thaps10673;Parent=Thaps10673;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 386563 387423 . + 0 ID=Thaps10673;Parent=Thaps10673;rank=1 chr17 . exon 386563 387423 . + . ID=Thaps10673.1;Parent=Thaps10673;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 387598 393529 . - . ID=Thaps37861;biotype=protein_coding;description=26S proteasome regulatory subunit 3 [Source:UniProtKB/TrEMBL%3BAcc:B8CE75];external_name=RPN3;logic_name=jgi_thaps3 chr17 ensembl transcript 387598 393529 . - . ID=Thaps37861;Parent=Thaps37861;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 387598 388528 . - 0 ID=Thaps37861;Parent=Thaps37861;rank=2 chr17 . exon 387598 388528 . - . ID=Thaps37861.2;Parent=Thaps37861;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 393483 393529 . - 0 ID=Thaps37861;Parent=Thaps37861;rank=1 chr17 ensembl protein_coding_gene 385298 386172 . - . ID=Thaps37948;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE73];external_name=Thaps37948;logic_name=jgi_thaps3 chr17 ensembl transcript 385298 386172 . - . ID=Thaps37948;Parent=Thaps37948;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 385298 385423 . - 0 ID=Thaps37948;Parent=Thaps37948;rank=5 chr17 . exon 385298 385423 . - . ID=Thaps37948.5;Parent=Thaps37948;constitutive=1;rank=5 chr17 . CDS 385536 385645 . - 0 ID=Thaps37948;Parent=Thaps37948;rank=4 chr17 . exon 385536 385645 . - . ID=Thaps37948.4;Parent=Thaps37948;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 385722 385793 . - 0 ID=Thaps37948;Parent=Thaps37948;rank=3 chr17 . exon 385722 385793 . - . ID=Thaps37948.3;Parent=Thaps37948;constitutive=1;rank=3 chr17 . CDS 385903 385978 . - 0 ID=Thaps37948;Parent=Thaps37948;rank=2 chr17 . exon 385903 385978 . - . ID=Thaps37948.2;Parent=Thaps37948;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 386068 386172 . - 0 ID=Thaps37948;Parent=Thaps37948;rank=1 chr17 . exon 386068 386172 . - . ID=Thaps37948.1;Parent=Thaps37948;constitutive=1;rank=1 chr17 . repeat_region 394765 394810 . ? . description=dust chr17 . repeat_region 395589 395618 . ? . description=trf chr17 . repeat_region 395593 395618 . ? . description=dust chr17 ensembl protein_coding_gene 393611 394642 . - . ID=Thaps10677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE76];external_name=Thaps10677;logic_name=jgi_thaps3 chr17 ensembl transcript 393611 394642 . - . ID=Thaps10677;Parent=Thaps10677;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 393611 394642 . - 0 ID=Thaps10677;Parent=Thaps10677;rank=1 chr17 . exon 393611 394642 . - . ID=Thaps10677.1;Parent=Thaps10677;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 399322 403614 . - . ID=Thaps30301;biotype=protein_coding;description=Phosphoribosylformylglycinamidine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CE77];external_name=Thaps30301;logic_name=jgi_thaps3 chr17 ensembl transcript 399322 403614 . - . ID=Thaps30301;Parent=Thaps30301;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 399322 401640 . - 0 ID=Thaps30301;Parent=Thaps30301;rank=3 chr17 . exon 399322 401640 . - . ID=Thaps30301.3;Parent=Thaps30301;constitutive=1;rank=3 chr17 . CDS 401731 402732 . - 0 ID=Thaps30301;Parent=Thaps30301;rank=2 chr17 . CDS 402970 403614 . - 0 ID=Thaps30301;Parent=Thaps30301;rank=1 chr17 . exon 393483 393529 . - . ID=Thaps37861.1;Parent=Thaps37861;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 408909 409535 . + . ID=Thaps10681;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE80];external_name=Thaps10681;logic_name=jgi_thaps3 chr17 ensembl transcript 408909 409535 . + . ID=Thaps10681;Parent=Thaps10681;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 408909 409535 . + 0 ID=Thaps10681;Parent=Thaps10681;rank=1 chr17 . exon 408909 409535 . + . ID=Thaps10681.1;Parent=Thaps10681;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 404215 406944 . + . ID=Thaps25276;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE78];external_name=Thaps25276;logic_name=jgi_thaps3 chr17 ensembl transcript 404215 406944 . + . ID=Thaps25276;Parent=Thaps25276;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 404215 405422 . + 0 ID=Thaps25276;Parent=Thaps25276;rank=1 chr17 . exon 404215 405422 . + . ID=Thaps25276.1;Parent=Thaps25276;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 405594 405804 . + 0 ID=Thaps25276;Parent=Thaps25276;rank=2 chr17 . exon 405594 405804 . + . ID=Thaps25276.2;Parent=Thaps25276;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 405884 406231 . + 0 ID=Thaps25276;Parent=Thaps25276;rank=3 chr17 . exon 405884 406231 . + . ID=Thaps25276.3;Parent=Thaps25276;constitutive=1;rank=3 chr17 . CDS 406312 406944 . + 0 ID=Thaps25276;Parent=Thaps25276;rank=4 chr17 . exon 406312 406944 . + . ID=Thaps25276.4;Parent=Thaps25276;constitutive=1;rank=4 chr17 . exon 401731 402732 . - . ID=Thaps30301.2;Parent=Thaps30301;constitutive=1;rank=2 chr17 . exon 402970 403614 . - . ID=Thaps30301.1;Parent=Thaps30301;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 407099 408132 . - . ID=Thaps37970;biotype=protein_coding;description=Mitochondrial carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE79];external_name=Thaps37970;logic_name=jgi_thaps3 chr17 ensembl transcript 407099 408132 . - . ID=Thaps37970;Parent=Thaps37970;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 407099 407503 . - 0 ID=Thaps37970;Parent=Thaps37970;rank=3 chr17 . exon 407099 407503 . - . ID=Thaps37970.3;Parent=Thaps37970;constitutive=1;rank=3 chr17 . CDS 407602 407836 . - 0 ID=Thaps37970;Parent=Thaps37970;rank=2 chr17 . exon 407602 407836 . - . ID=Thaps37970.2;Parent=Thaps37970;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 408017 408132 . - 0 ID=Thaps37970;Parent=Thaps37970;rank=1 chr17 . exon 408017 408132 . - . ID=Thaps37970.1;Parent=Thaps37970;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . repeat_region 412006 412062 . ? . description=trf chr17 . repeat_region 412569 412620 . ? . description=dust chr17 . repeat_region 413428 413456 . ? . description=trf chr17 . repeat_region 413431 413456 . ? . description=trf chr17 . repeat_region 413731 413741 . ? . description=dust chr17 . repeat_region 414082 414089 . ? . description=dust chr17 . repeat_region 417767 417777 . ? . description=dust chr17 . repeat_region 419163 419252 . ? . description=trf chr17 ensembl protein_coding_gene 411984 412806 . + . ID=Thaps10683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE82];external_name=Thaps10683;logic_name=jgi_thaps3 chr17 ensembl transcript 411984 412806 . + . ID=Thaps10683;Parent=Thaps10683;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 411984 412103 . + 0 ID=Thaps10683;Parent=Thaps10683;rank=1 chr17 . exon 411984 412103 . + . ID=Thaps10683.1;Parent=Thaps10683;constitutive=1;rank=1 chr17 . CDS 412299 412416 . + 0 ID=Thaps10683;Parent=Thaps10683;rank=2 chr17 . exon 412299 412416 . + . ID=Thaps10683.2;Parent=Thaps10683;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 412649 412806 . + 0 ID=Thaps10683;Parent=Thaps10683;rank=3 chr17 . exon 412649 412806 . + . ID=Thaps10683.3;Parent=Thaps10683;constitutive=1;ensembl_end_phase=2;rank=3 chr17 ensembl protein_coding_gene 411317 411619 . - . ID=Thaps25277;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE81];external_name=Thaps25277;logic_name=jgi_thaps3 chr17 ensembl transcript 411317 411619 . - . ID=Thaps25277;Parent=Thaps25277;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 411317 411619 . - 0 ID=Thaps25277;Parent=Thaps25277;rank=1 chr17 . exon 411317 411619 . - . ID=Thaps25277.1;Parent=Thaps25277;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 413080 414598 . - . ID=Thaps25278;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE83];external_name=Thaps25278;logic_name=jgi_thaps3 chr17 ensembl transcript 413080 414598 . - . ID=Thaps25278;Parent=Thaps25278;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 413080 413255 . - 0 ID=Thaps25278;Parent=Thaps25278;rank=4 chr17 . exon 413080 413255 . - . ID=Thaps25278.4;Parent=Thaps25278;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 413378 413555 . - 0 ID=Thaps25278;Parent=Thaps25278;rank=3 chr17 . exon 413378 413555 . - . ID=Thaps25278.3;Parent=Thaps25278;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 413811 414023 . - 0 ID=Thaps25278;Parent=Thaps25278;rank=2 chr17 . exon 413811 414023 . - . ID=Thaps25278.2;Parent=Thaps25278;constitutive=1;rank=2 chr17 . CDS 414164 414598 . - 0 ID=Thaps25278;Parent=Thaps25278;rank=1 chr17 . exon 414164 414598 . - . ID=Thaps25278.1;Parent=Thaps25278;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 414925 416654 . + . ID=Thaps25279;biotype=protein_coding;description=T-complex protein 1 zeta subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CE84];external_name=Thaps25279;logic_name=jgi_thaps3 chr17 ensembl transcript 414925 416654 . + . ID=Thaps25279;Parent=Thaps25279;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 414925 415176 . + 0 ID=Thaps25279;Parent=Thaps25279;rank=1 chr17 . exon 414925 415176 . + . ID=Thaps25279.1;Parent=Thaps25279;constitutive=1;rank=1 chr17 . CDS 415260 416654 . + 0 ID=Thaps25279;Parent=Thaps25279;rank=2 chr17 . exon 415260 416654 . + . ID=Thaps25279.2;Parent=Thaps25279;constitutive=1;rank=2 chr17 ensembl protein_coding_gene 419157 419802 . - . ID=Thaps25280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE87];external_name=Thaps25280;logic_name=jgi_thaps3 chr17 ensembl transcript 419157 419802 . - . ID=Thaps25280;Parent=Thaps25280;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 419157 419418 . - 0 ID=Thaps25280;Parent=Thaps25280;rank=2 chr17 . exon 419157 419418 . - . ID=Thaps25280.2;Parent=Thaps25280;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 419504 419802 . - 0 ID=Thaps25280;Parent=Thaps25280;rank=1 chr17 . exon 419504 419802 . - . ID=Thaps25280.1;Parent=Thaps25280;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 416928 417358 . - . ID=Thaps37934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE85];external_name=Thaps37934;logic_name=jgi_thaps3 chr17 ensembl transcript 416928 417358 . - . ID=Thaps37934;Parent=Thaps37934;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 416928 417045 . - 0 ID=Thaps37934;Parent=Thaps37934;rank=2 chr17 . exon 416928 417045 . - . ID=Thaps37934.2;Parent=Thaps37934;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 417150 417358 . - 0 ID=Thaps37934;Parent=Thaps37934;rank=1 chr17 . exon 417150 417358 . - . ID=Thaps37934.1;Parent=Thaps37934;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 417871 418572 . + . ID=Thaps37988;biotype=protein_coding;description=Adp-ribosylation factor 1 [Source:UniProtKB/TrEMBL%3BAcc:B8CE86];external_name=ARF1;logic_name=jgi_thaps3 chr17 ensembl transcript 417871 418572 . + . ID=Thaps37988;Parent=Thaps37988;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 417871 418062 . + 0 ID=Thaps37988;Parent=Thaps37988;rank=1 chr17 . exon 417871 418062 . + . ID=Thaps37988.1;Parent=Thaps37988;constitutive=1;rank=1 chr17 . CDS 418207 418572 . + 0 ID=Thaps37988;Parent=Thaps37988;rank=2 chr17 . exon 418207 418572 . + . ID=Thaps37988.2;Parent=Thaps37988;constitutive=1;rank=2 chr17 ensembl protein_coding_gene 421813 423309 . + . ID=Thaps10690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE89];external_name=Thaps10690;logic_name=jgi_thaps3 chr17 ensembl transcript 421813 423309 . + . ID=Thaps10690;Parent=Thaps10690;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 421813 422032 . + 0 ID=Thaps10690;Parent=Thaps10690;rank=1 chr17 . exon 421813 422032 . + . ID=Thaps10690.1;Parent=Thaps10690;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 422150 423309 . + 0 ID=Thaps10690;Parent=Thaps10690;rank=2 chr17 . exon 422150 423309 . + . ID=Thaps10690.2;Parent=Thaps10690;constitutive=1;ensembl_end_phase=2;rank=2 chr17 ensembl protein_coding_gene 429870 431038 . - . ID=Thaps10693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE91];external_name=Thaps10693;logic_name=jgi_thaps3 chr17 ensembl transcript 429870 431038 . - . ID=Thaps10693;Parent=Thaps10693;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 429870 429902 . - 0 ID=Thaps10693;Parent=Thaps10693;rank=2 chr17 . exon 429870 429902 . - . ID=Thaps10693.2;Parent=Thaps10693;constitutive=1;rank=2 chr17 . CDS 429941 431038 . - 0 ID=Thaps10693;Parent=Thaps10693;rank=1 chr17 . exon 429941 431038 . - . ID=Thaps10693.1;Parent=Thaps10693;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 420247 421544 . - . ID=Thaps25281;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE88];external_name=Thaps25281;logic_name=jgi_thaps3 chr17 ensembl transcript 420247 421544 . - . ID=Thaps25281;Parent=Thaps25281;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 420247 420794 . - 0 ID=Thaps25281;Parent=Thaps25281;rank=2 chr17 . exon 420247 420794 . - . ID=Thaps25281.2;Parent=Thaps25281;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 420896 421544 . - 0 ID=Thaps25281;Parent=Thaps25281;rank=1 chr17 . exon 420896 421544 . - . ID=Thaps25281.1;Parent=Thaps25281;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 424120 425983 . + . ID=Thaps269917;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE90];external_name=Thaps269917;logic_name=jgi_thaps3 chr17 ensembl transcript 424120 425983 . + . ID=Thaps269917;Parent=Thaps269917;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 424120 424181 . + 0 ID=Thaps269917;Parent=Thaps269917;rank=1 chr17 . exon 424120 424181 . + . ID=Thaps269917.1;Parent=Thaps269917;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 424229 424729 . + 0 ID=Thaps269917;Parent=Thaps269917;rank=2 chr17 . exon 424229 424729 . + . ID=Thaps269917.2;Parent=Thaps269917;constitutive=1;rank=2 chr17 . CDS 424817 425216 . + 0 ID=Thaps269917;Parent=Thaps269917;rank=3 chr17 . exon 424817 425216 . + . ID=Thaps269917.3;Parent=Thaps269917;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 425300 425983 . + 0 ID=Thaps269917;Parent=Thaps269917;rank=4 chr17 . exon 425300 425983 . + . ID=Thaps269917.4;Parent=Thaps269917;constitutive=1;rank=4 chr17 ensembl protein_coding_gene 434105 434662 . - . ID=Thaps10695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE93];external_name=Thaps10695;logic_name=jgi_thaps3 chr17 ensembl transcript 434105 434662 . - . ID=Thaps10695;Parent=Thaps10695;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 434105 434662 . - 0 ID=Thaps10695;Parent=Thaps10695;rank=1 chr17 . exon 434105 434662 . - . ID=Thaps10695.1;Parent=Thaps10695;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 434988 438272 . + . ID=Thaps25284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE94];external_name=Thaps25284;logic_name=jgi_thaps3 chr17 ensembl transcript 434988 438272 . + . ID=Thaps25284;Parent=Thaps25284;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 434988 436465 . + 0 ID=Thaps25284;Parent=Thaps25284;rank=1 chr17 . exon 434988 436465 . + . ID=Thaps25284.1;Parent=Thaps25284;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 436546 436780 . + 0 ID=Thaps25284;Parent=Thaps25284;rank=2 chr17 . exon 436546 436780 . + . ID=Thaps25284.2;Parent=Thaps25284;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 436860 437577 . + 0 ID=Thaps25284;Parent=Thaps25284;rank=3 chr17 . exon 436860 437577 . + . ID=Thaps25284.3;Parent=Thaps25284;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 437656 438272 . + 0 ID=Thaps25284;Parent=Thaps25284;rank=4 chr17 . exon 437656 438272 . + . ID=Thaps25284.4;Parent=Thaps25284;constitutive=1;ensembl_end_phase=2;rank=4 chr17 ensembl protein_coding_gene 432533 433473 . - . ID=Thaps264461;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE92];external_name=Thaps264461;logic_name=jgi_thaps3 chr17 ensembl transcript 432533 433473 . - . ID=Thaps264461;Parent=Thaps264461;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 432533 432578 . - 0 ID=Thaps264461;Parent=Thaps264461;rank=4 chr17 . exon 432533 432578 . - . ID=Thaps264461.4;Parent=Thaps264461;constitutive=1;ensembl_end_phase=1;rank=4 chr17 . CDS 432674 433135 . - 0 ID=Thaps264461;Parent=Thaps264461;rank=3 chr17 . exon 432674 433135 . - . ID=Thaps264461.3;Parent=Thaps264461;constitutive=1;rank=3 chr17 . CDS 433219 433376 . - 0 ID=Thaps264461;Parent=Thaps264461;rank=2 chr17 . exon 433219 433376 . - . ID=Thaps264461.2;Parent=Thaps264461;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 433456 433473 . - 0 ID=Thaps264461;Parent=Thaps264461;rank=1 chr17 . exon 433456 433473 . - . ID=Thaps264461.1;Parent=Thaps264461;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 438392 439944 . - . ID=Thaps38011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE95];external_name=Thaps38011;logic_name=jgi_thaps3 chr17 ensembl transcript 438392 439944 . - . ID=Thaps38011;Parent=Thaps38011;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 438392 439101 . - 0 ID=Thaps38011;Parent=Thaps38011;rank=4 chr17 . exon 438392 439101 . - . ID=Thaps38011.4;Parent=Thaps38011;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 439251 439326 . - 0 ID=Thaps38011;Parent=Thaps38011;rank=3 chr17 . exon 439251 439326 . - . ID=Thaps38011.3;Parent=Thaps38011;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 439498 439593 . - 0 ID=Thaps38011;Parent=Thaps38011;rank=2 chr17 . exon 439498 439593 . - . ID=Thaps38011.2;Parent=Thaps38011;constitutive=1;rank=2 chr17 . CDS 439852 439944 . - 0 ID=Thaps38011;Parent=Thaps38011;rank=1 chr17 . exon 439852 439944 . - . ID=Thaps38011.1;Parent=Thaps38011;constitutive=1;rank=1 chr17 . repeat_region 444613 444634 . ? . description=dust chr17 ensembl protein_coding_gene 440846 450187 . - . ID=Thaps10699;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE96];external_name=Thaps10699;logic_name=jgi_thaps3 chr17 ensembl transcript 440846 450187 . - . ID=Thaps10699;Parent=Thaps10699;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 440846 441161 . - 0 ID=Thaps10699;Parent=Thaps10699;rank=6 chr17 . exon 440846 441161 . - . ID=Thaps10699.6;Parent=Thaps10699;constitutive=1;ensembl_end_phase=1;rank=6 chr17 . CDS 441234 441393 . - 0 ID=Thaps10699;Parent=Thaps10699;rank=5 chr17 . exon 441234 441393 . - . ID=Thaps10699.5;Parent=Thaps10699;constitutive=1;ensembl_end_phase=1;rank=5 chr17 . CDS 441509 443328 . - 0 ID=Thaps10699;Parent=Thaps10699;rank=4 chr17 . exon 441509 443328 . - . ID=Thaps10699.4;Parent=Thaps10699;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 443458 443736 . - 0 ID=Thaps10699;Parent=Thaps10699;rank=3 chr17 . exon 443458 443736 . - . ID=Thaps10699.3;Parent=Thaps10699;constitutive=1;rank=3 chr17 . CDS 443933 444571 . - 0 ID=Thaps10699;Parent=Thaps10699;rank=2 chr17 . exon 443933 444571 . - . ID=Thaps10699.2;Parent=Thaps10699;constitutive=1;rank=2 chr17 . CDS 444636 450187 . - 0 ID=Thaps10699;Parent=Thaps10699;rank=1 chr17 . exon 444636 450187 . - . ID=Thaps10699.1;Parent=Thaps10699;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . repeat_region 456636 456655 . ? . description=trf chr17 ensembl protein_coding_gene 451656 453258 . + . ID=Thaps14028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE97];external_name=Thaps14028;logic_name=jgi_thaps3 chr17 ensembl transcript 451656 453258 . + . ID=Thaps14028;Parent=Thaps14028;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 451656 452048 . + 0 ID=Thaps14028;Parent=Thaps14028;rank=1 chr17 . exon 451656 452048 . + . ID=Thaps14028.1;Parent=Thaps14028;constitutive=1;rank=1 chr17 . CDS 452157 452818 . + 0 ID=Thaps14028;Parent=Thaps14028;rank=2 chr17 . exon 452157 452818 . + . ID=Thaps14028.2;Parent=Thaps14028;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 452899 452979 . + 0 ID=Thaps14028;Parent=Thaps14028;rank=3 chr17 . exon 452899 452979 . + . ID=Thaps14028.3;Parent=Thaps14028;constitutive=1;rank=3 chr17 . CDS 453075 453258 . + 0 ID=Thaps14028;Parent=Thaps14028;rank=4 chr17 . exon 453075 453258 . + . ID=Thaps14028.4;Parent=Thaps14028;constitutive=1;ensembl_end_phase=1;rank=4 chr17 ensembl protein_coding_gene 458414 463046 . - . ID=Thaps25288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE99];external_name=Thaps25288;logic_name=jgi_thaps3 chr17 ensembl transcript 458414 463046 . - . ID=Thaps25288;Parent=Thaps25288;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 458414 459599 . - 0 ID=Thaps25288;Parent=Thaps25288;rank=2 chr17 . exon 458414 459599 . - . ID=Thaps25288.2;Parent=Thaps25288;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 459691 463046 . - 0 ID=Thaps25288;Parent=Thaps25288;rank=1 chr17 . exon 459691 463046 . - . ID=Thaps25288.1;Parent=Thaps25288;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 453937 456087 . - . ID=Thaps37944;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CE98];external_name=Thaps37944;logic_name=jgi_thaps3 chr17 ensembl transcript 453937 456087 . - . ID=Thaps37944;Parent=Thaps37944;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 453937 454269 . - 0 ID=Thaps37944;Parent=Thaps37944;rank=6 chr17 . exon 453937 454269 . - . ID=Thaps37944.6;Parent=Thaps37944;constitutive=1;rank=6 chr17 . CDS 454339 454728 . - 0 ID=Thaps37944;Parent=Thaps37944;rank=5 chr17 . exon 454339 454728 . - . ID=Thaps37944.5;Parent=Thaps37944;constitutive=1;rank=5 chr17 . CDS 454834 455081 . - 0 ID=Thaps37944;Parent=Thaps37944;rank=4 chr17 . exon 454834 455081 . - . ID=Thaps37944.4;Parent=Thaps37944;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 455130 455246 . - 0 ID=Thaps37944;Parent=Thaps37944;rank=3 chr17 . exon 455130 455246 . - . ID=Thaps37944.3;Parent=Thaps37944;constitutive=1;rank=3 chr17 . CDS 455352 455784 . - 0 ID=Thaps37944;Parent=Thaps37944;rank=2 chr17 . exon 455352 455784 . - . ID=Thaps37944.2;Parent=Thaps37944;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 455830 456087 . - 0 ID=Thaps37944;Parent=Thaps37944;rank=1 chr17 . exon 455830 456087 . - . ID=Thaps37944.1;Parent=Thaps37944;constitutive=1;rank=1 chr17 . repeat_region 462447 462505 . ? . description=dust chr17 . biological_region 463350 463354 0.999 - . logic_name=eponine chr17 . repeat_region 469477 469496 . ? . description=dust chr17 ensembl protein_coding_gene 466315 467183 . - . ID=Thaps30310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEA1];external_name=Thaps30310;logic_name=jgi_thaps3 chr17 ensembl transcript 466315 467183 . - . ID=Thaps30310;Parent=Thaps30310;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 466315 466651 . - 0 ID=Thaps30310;Parent=Thaps30310;rank=2 chr17 . exon 466315 466651 . - . ID=Thaps30310.2;Parent=Thaps30310;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 466717 467183 . - 0 ID=Thaps30310;Parent=Thaps30310;rank=1 chr17 . exon 466717 467183 . - . ID=Thaps30310.1;Parent=Thaps30310;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 464642 465625 . + . ID=Thaps37942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEA0];external_name=Thaps37942;logic_name=jgi_thaps3 chr17 ensembl transcript 464642 465625 . + . ID=Thaps37942;Parent=Thaps37942;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 464642 464768 . + 0 ID=Thaps37942;Parent=Thaps37942;rank=1 chr17 . exon 464642 464768 . + . ID=Thaps37942.1;Parent=Thaps37942;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 464868 465169 . + 0 ID=Thaps37942;Parent=Thaps37942;rank=2 chr17 . exon 464868 465169 . + . ID=Thaps37942.2;Parent=Thaps37942;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 465239 465410 . + 0 ID=Thaps37942;Parent=Thaps37942;rank=3 chr17 . exon 465239 465410 . + . ID=Thaps37942.3;Parent=Thaps37942;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 465486 465625 . + 0 ID=Thaps37942;Parent=Thaps37942;rank=4 chr17 . exon 465486 465625 . + . ID=Thaps37942.4;Parent=Thaps37942;constitutive=1;ensembl_end_phase=2;rank=4 chr17 ensembl protein_coding_gene 470551 473211 . - . ID=Thaps25290;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEA2];external_name=Thaps25290;logic_name=jgi_thaps3 chr17 ensembl transcript 470551 473211 . - . ID=Thaps25290;Parent=Thaps25290;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 470551 473211 . - 0 ID=Thaps25290;Parent=Thaps25290;rank=1 chr17 . exon 470551 473211 . - . ID=Thaps25290.1;Parent=Thaps25290;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 478972 480618 . - . ID=Thaps25292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEA5];external_name=Thaps25292;logic_name=jgi_thaps3 chr17 ensembl transcript 478972 480618 . - . ID=Thaps25292;Parent=Thaps25292;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 478972 479570 . - 0 ID=Thaps25292;Parent=Thaps25292;rank=2 chr17 . exon 478972 479570 . - . ID=Thaps25292.2;Parent=Thaps25292;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 479670 480618 . - 0 ID=Thaps25292;Parent=Thaps25292;rank=1 chr17 . exon 479670 480618 . - . ID=Thaps25292.1;Parent=Thaps25292;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 474056 475323 . - . ID=Thaps37920;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8CEA3];external_name=Thaps37920;logic_name=jgi_thaps3 chr17 ensembl transcript 474056 475323 . - . ID=Thaps37920;Parent=Thaps37920;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 474056 474220 . - 0 ID=Thaps37920;Parent=Thaps37920;rank=7 chr17 . exon 474056 474220 . - . ID=Thaps37920.7;Parent=Thaps37920;constitutive=1;rank=7 chr17 . CDS 474380 474445 . - 0 ID=Thaps37920;Parent=Thaps37920;rank=6 chr17 . exon 474380 474445 . - . ID=Thaps37920.6;Parent=Thaps37920;constitutive=1;rank=6 chr17 . CDS 474581 474627 . - 0 ID=Thaps37920;Parent=Thaps37920;rank=5 chr17 . exon 474581 474627 . - . ID=Thaps37920.5;Parent=Thaps37920;constitutive=1;ensembl_end_phase=2;rank=5 chr17 . CDS 474721 474751 . - 0 ID=Thaps37920;Parent=Thaps37920;rank=4 chr17 . exon 474721 474751 . - . ID=Thaps37920.4;Parent=Thaps37920;constitutive=1;ensembl_end_phase=1;rank=4 chr17 . CDS 474864 474930 . - 0 ID=Thaps37920;Parent=Thaps37920;rank=3 chr17 . exon 474864 474930 . - . ID=Thaps37920.3;Parent=Thaps37920;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 475048 475080 . - 0 ID=Thaps37920;Parent=Thaps37920;rank=2 chr17 . exon 475048 475080 . - . ID=Thaps37920.2;Parent=Thaps37920;constitutive=1;rank=2 chr17 . CDS 475208 475323 . - 0 ID=Thaps37920;Parent=Thaps37920;rank=1 chr17 . exon 475208 475323 . - . ID=Thaps37920.1;Parent=Thaps37920;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 475744 477708 . - . ID=Thaps42687;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEA4];external_name=Thaps42687;logic_name=jgi_thaps3 chr17 ensembl transcript 475744 477708 . - . ID=Thaps42687;Parent=Thaps42687;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 475744 475979 . - 0 ID=Thaps42687;Parent=Thaps42687;rank=3 chr17 . exon 475744 475979 . - . ID=Thaps42687.3;Parent=Thaps42687;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 476148 476881 . - 0 ID=Thaps42687;Parent=Thaps42687;rank=2 chr17 . exon 476148 476881 . - . ID=Thaps42687.2;Parent=Thaps42687;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 477314 477708 . - 0 ID=Thaps42687;Parent=Thaps42687;rank=1 chr17 . exon 477314 477708 . - . ID=Thaps42687.1;Parent=Thaps42687;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . repeat_region 485806 485865 . ? . description=dust chr17 . repeat_region 486747 486768 . ? . description=trf chr17 . repeat_region 486747 486768 . ? . description=dust chr17 ensembl protein_coding_gene 484251 485271 . - . ID=Thaps25294;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEA8];external_name=Thaps25294;logic_name=jgi_thaps3 chr17 ensembl transcript 484251 485271 . - . ID=Thaps25294;Parent=Thaps25294;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 484251 484757 . - 0 ID=Thaps25294;Parent=Thaps25294;rank=3 chr17 . exon 484251 484757 . - . ID=Thaps25294.3;Parent=Thaps25294;constitutive=1;rank=3 chr17 . CDS 484809 485053 . - 0 ID=Thaps25294;Parent=Thaps25294;rank=2 chr17 . exon 484809 485053 . - . ID=Thaps25294.2;Parent=Thaps25294;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 485133 485271 . - 0 ID=Thaps25294;Parent=Thaps25294;rank=1 chr17 . exon 485133 485271 . - . ID=Thaps25294.1;Parent=Thaps25294;constitutive=1;ensembl_end_phase=1;rank=1 chr17 ensembl protein_coding_gene 486882 490939 . - . ID=Thaps25295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEA9];external_name=Thaps25295;logic_name=jgi_thaps3 chr17 ensembl transcript 486882 490939 . - . ID=Thaps25295;Parent=Thaps25295;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 486882 487034 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=10 chr17 . exon 486882 487034 . - . ID=Thaps25295.10;Parent=Thaps25295;constitutive=1;rank=10 chr17 . CDS 487141 487461 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=9 chr17 . exon 487141 487461 . - . ID=Thaps25295.9;Parent=Thaps25295;constitutive=1;rank=9 chr17 . CDS 487549 487718 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=8 chr17 . exon 487549 487718 . - . ID=Thaps25295.8;Parent=Thaps25295;constitutive=1;ensembl_end_phase=2;rank=8 chr17 . CDS 488068 488233 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=7 chr17 . exon 488068 488233 . - . ID=Thaps25295.7;Parent=Thaps25295;constitutive=1;ensembl_end_phase=1;rank=7 chr17 . CDS 488341 488374 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=6 chr17 . exon 488341 488374 . - . ID=Thaps25295.6;Parent=Thaps25295;constitutive=1;ensembl_end_phase=1;rank=6 chr17 . CDS 488512 488994 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=5 chr17 . exon 488512 488994 . - . ID=Thaps25295.5;Parent=Thaps25295;constitutive=1;rank=5 chr17 . CDS 489084 489524 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=4 chr17 . exon 489084 489524 . - . ID=Thaps25295.4;Parent=Thaps25295;constitutive=1;rank=4 chr17 . CDS 489600 489821 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=3 chr17 . exon 489600 489821 . - . ID=Thaps25295.3;Parent=Thaps25295;constitutive=1;rank=3 chr17 . CDS 489914 490070 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=2 chr17 . exon 489914 490070 . - . ID=Thaps25295.2;Parent=Thaps25295;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 490180 490939 . - 0 ID=Thaps25295;Parent=Thaps25295;rank=1 chr17 ensembl protein_coding_gene 483367 483564 . - . ID=Thaps37961;biotype=protein_coding;description=Tim10-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEA7];external_name=Thaps37961;logic_name=jgi_thaps3 chr17 ensembl transcript 483367 483564 . - . ID=Thaps37961;Parent=Thaps37961;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 483367 483564 . - 0 ID=Thaps37961;Parent=Thaps37961;rank=1 chr17 . exon 483367 483564 . - . ID=Thaps37961.1;Parent=Thaps37961;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 482060 483073 . + . ID=Thaps795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEA6];external_name=Thaps795;logic_name=jgi_thaps3 chr17 ensembl transcript 482060 483073 . + . ID=Thaps795;Parent=Thaps795;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 482060 483073 . + 0 ID=Thaps795;Parent=Thaps795;rank=1 chr17 . exon 482060 483073 . + . ID=Thaps795.1;Parent=Thaps795;constitutive=1;rank=1 chr17 . repeat_region 491399 491466 . - . description=Harbinger3_TP chr17 . repeat_region 496446 497921 . - . description=Harbinger3_TP chr17 . repeat_region 498183 498422 . - . description=Harbinger3_TP chr17 . repeat_region 498879 499233 . + . description=Copia9I_TP chr17 ensembl protein_coding_gene 491927 492628 . + . ID=Thaps10712;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB0];external_name=Thaps10712;logic_name=jgi_thaps3 chr17 ensembl transcript 491927 492628 . + . ID=Thaps10712;Parent=Thaps10712;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 491927 492628 . + 0 ID=Thaps10712;Parent=Thaps10712;rank=1 chr17 . exon 491927 492628 . + . ID=Thaps10712.1;Parent=Thaps10712;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 493616 494715 . + . ID=Thaps10713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB1];external_name=Thaps10713;logic_name=jgi_thaps3 chr17 ensembl transcript 493616 494715 . + . ID=Thaps10713;Parent=Thaps10713;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 493616 494132 . + 0 ID=Thaps10713;Parent=Thaps10713;rank=1 chr17 . exon 493616 494132 . + . ID=Thaps10713.1;Parent=Thaps10713;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 494168 494715 . + 0 ID=Thaps10713;Parent=Thaps10713;rank=2 chr17 . exon 494168 494715 . + . ID=Thaps10713.2;Parent=Thaps10713;constitutive=1;ensembl_end_phase=2;rank=2 chr17 ensembl protein_coding_gene 495052 495540 . + . ID=Thaps10714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB2];external_name=Thaps10714;logic_name=jgi_thaps3 chr17 ensembl transcript 495052 495540 . + . ID=Thaps10714;Parent=Thaps10714;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 495052 495540 . + 0 ID=Thaps10714;Parent=Thaps10714;rank=1 chr17 . exon 495052 495540 . + . ID=Thaps10714.1;Parent=Thaps10714;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 499280 500229 . + . ID=Thaps10715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB3];external_name=Thaps10715;logic_name=jgi_thaps3 chr17 ensembl transcript 499280 500229 . + . ID=Thaps10715;Parent=Thaps10715;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 499280 500044 . + 0 ID=Thaps10715;Parent=Thaps10715;rank=1 chr17 . exon 499280 500044 . + . ID=Thaps10715.1;Parent=Thaps10715;constitutive=1;rank=1 chr17 . CDS 500206 500229 . + 0 ID=Thaps10715;Parent=Thaps10715;rank=2 chr17 . exon 490180 490939 . - . ID=Thaps25295.1;Parent=Thaps25295;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . repeat_region 501408 501444 . ? . description=dust chr17 . repeat_region 501806 501834 . ? . description=dust chr17 . repeat_region 501811 501834 . ? . description=trf chr17 ensembl tRNA_gene 500928 500999 . - . ID=EPrTPOG00000000063;biotype=tRNA;description=tRNA-Val for anticodon AAC [Source:TRNASCAN_SE%3BAcc:tRNA-Val];external_name=tRNA-Val;logic_name=ncrna_eg chr17 ensembl transcript 500928 500999 . - . ID=EPrTPOT00000000063;Parent=EPrTPOG00000000063;biotype=tRNA;logic_name=ncrna_eg chr17 . exon 500928 500999 . - . ID=EPrTPOE00000000063;Parent=EPrTPOT00000000063;constitutive=1;rank=1 chr17 . exon 500206 500229 . + . ID=Thaps10715.2;Parent=Thaps10715;constitutive=1;rank=2 chr17 ensembl protein_coding_gene 501568 503292 . + . ID=Thaps15472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB4];external_name=Thaps15472;logic_name=jgi_thaps3 chr17 ensembl transcript 501568 503292 . + . ID=Thaps15472;Parent=Thaps15472;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 501568 501629 . + 0 ID=Thaps15472;Parent=Thaps15472;rank=1 chr17 . exon 501568 501629 . + . ID=Thaps15472.1;Parent=Thaps15472;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 501855 501986 . + 0 ID=Thaps15472;Parent=Thaps15472;rank=2 chr17 . exon 501855 501986 . + . ID=Thaps15472.2;Parent=Thaps15472;constitutive=1;rank=2 chr17 . CDS 502509 502863 . + 0 ID=Thaps15472;Parent=Thaps15472;rank=3 chr17 . exon 502509 502863 . + . ID=Thaps15472.3;Parent=Thaps15472;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 502954 503139 . + 0 ID=Thaps15472;Parent=Thaps15472;rank=4 chr17 . exon 502954 503139 . + . ID=Thaps15472.4;Parent=Thaps15472;constitutive=1;rank=4 chr17 . CDS 503227 503292 . + 0 ID=Thaps15472;Parent=Thaps15472;rank=5 chr17 . exon 503227 503292 . + . ID=Thaps15472.5;Parent=Thaps15472;constitutive=1;rank=5 chr17 ensembl protein_coding_gene 503571 514152 . - . ID=Thaps25297;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB5];external_name=Thaps25297;logic_name=jgi_thaps3 chr17 ensembl transcript 503571 514152 . - . ID=Thaps25297;Parent=Thaps25297;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 503571 503914 . - 0 ID=Thaps25297;Parent=Thaps25297;rank=8 chr17 . exon 503571 503914 . - . ID=Thaps25297.8;Parent=Thaps25297;constitutive=1;ensembl_end_phase=2;rank=8 chr17 . CDS 503991 504415 . - 0 ID=Thaps25297;Parent=Thaps25297;rank=7 chr17 . exon 503991 504415 . - . ID=Thaps25297.7;Parent=Thaps25297;constitutive=1;ensembl_end_phase=2;rank=7 chr17 . CDS 504501 504687 . - 0 ID=Thaps25297;Parent=Thaps25297;rank=6 chr17 . exon 504501 504687 . - . ID=Thaps25297.6;Parent=Thaps25297;constitutive=1;ensembl_end_phase=1;rank=6 chr17 . CDS 504763 507187 . - 0 ID=Thaps25297;Parent=Thaps25297;rank=5 chr17 . exon 504763 507187 . - . ID=Thaps25297.5;Parent=Thaps25297;constitutive=1;ensembl_end_phase=1;rank=5 chr17 . CDS 507266 507750 . - 0 ID=Thaps25297;Parent=Thaps25297;rank=4 chr17 . exon 507266 507750 . - . ID=Thaps25297.4;Parent=Thaps25297;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 507831 508006 . - 0 ID=Thaps25297;Parent=Thaps25297;rank=3 chr17 . exon 507831 508006 . - . ID=Thaps25297.3;Parent=Thaps25297;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 508085 509088 . - 0 ID=Thaps25297;Parent=Thaps25297;rank=2 chr17 . exon 508085 509088 . - . ID=Thaps25297.2;Parent=Thaps25297;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 509167 514152 . - 0 ID=Thaps25297;Parent=Thaps25297;rank=1 chr17 . exon 509167 514152 . - . ID=Thaps25297.1;Parent=Thaps25297;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 514644 516119 . - . ID=Thaps10718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB6];external_name=Thaps10718;logic_name=jgi_thaps3 chr17 ensembl transcript 514644 516119 . - . ID=Thaps10718;Parent=Thaps10718;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 514644 516119 . - 0 ID=Thaps10718;Parent=Thaps10718;rank=1 chr17 . exon 514644 516119 . - . ID=Thaps10718.1;Parent=Thaps10718;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 518936 520883 . + . ID=Thaps13884;biotype=protein_coding;description=ABC-transporter like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB9];external_name=Thaps13884;logic_name=jgi_thaps3 chr17 ensembl transcript 518936 520883 . + . ID=Thaps13884;Parent=Thaps13884;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 518936 519287 . + 0 ID=Thaps13884;Parent=Thaps13884;rank=1 chr17 . exon 518936 519287 . + . ID=Thaps13884.1;Parent=Thaps13884;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 519416 519507 . + 0 ID=Thaps13884;Parent=Thaps13884;rank=2 chr17 . exon 519416 519507 . + . ID=Thaps13884.2;Parent=Thaps13884;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 519617 519985 . + 0 ID=Thaps13884;Parent=Thaps13884;rank=3 chr17 . exon 519617 519985 . + . ID=Thaps13884.3;Parent=Thaps13884;constitutive=1;rank=3 chr17 . CDS 520088 520658 . + 0 ID=Thaps13884;Parent=Thaps13884;rank=4 chr17 . CDS 520756 520883 . + 0 ID=Thaps13884;Parent=Thaps13884;rank=5 chr17 ensembl protein_coding_gene 517638 517835 . - . ID=Thaps20194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB8];external_name=Thaps20194;logic_name=jgi_thaps3 chr17 ensembl transcript 517638 517835 . - . ID=Thaps20194;Parent=Thaps20194;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 517638 517835 . - 0 ID=Thaps20194;Parent=Thaps20194;rank=1 chr17 . exon 517638 517835 . - . ID=Thaps20194.1;Parent=Thaps20194;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 516633 517076 . + . ID=Thaps264466;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEB7];external_name=Thaps264466;logic_name=jgi_thaps3 chr17 ensembl transcript 516633 517076 . + . ID=Thaps264466;Parent=Thaps264466;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 516633 516972 . + 0 ID=Thaps264466;Parent=Thaps264466;rank=1 chr17 . exon 516633 516972 . + . ID=Thaps264466.1;Parent=Thaps264466;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 517024 517076 . + 0 ID=Thaps264466;Parent=Thaps264466;rank=2 chr17 . exon 517024 517076 . + . ID=Thaps264466.2;Parent=Thaps264466;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . repeat_region 526240 526248 . ? . description=dust chr17 ensembl protein_coding_gene 523031 525293 . + . ID=Thaps10722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC1];external_name=Thaps10722;logic_name=jgi_thaps3 chr17 ensembl transcript 523031 525293 . + . ID=Thaps10722;Parent=Thaps10722;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 523031 524495 . + 0 ID=Thaps10722;Parent=Thaps10722;rank=1 chr17 . exon 523031 524495 . + . ID=Thaps10722.1;Parent=Thaps10722;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 524587 525293 . + 0 ID=Thaps10722;Parent=Thaps10722;rank=2 chr17 . exon 524587 525293 . + . ID=Thaps10722.2;Parent=Thaps10722;constitutive=1;ensembl_end_phase=2;rank=2 chr17 ensembl protein_coding_gene 527688 528113 . - . ID=Thaps10723;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC2];external_name=Thaps10723;logic_name=jgi_thaps3 chr17 ensembl transcript 527688 528113 . - . ID=Thaps10723;Parent=Thaps10723;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 527688 528113 . - 0 ID=Thaps10723;Parent=Thaps10723;rank=1 chr17 . exon 527688 528113 . - . ID=Thaps10723.1;Parent=Thaps10723;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 528248 530002 . + . ID=Thaps10724;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC3];external_name=Thaps10724;logic_name=jgi_thaps3 chr17 ensembl transcript 528248 530002 . + . ID=Thaps10724;Parent=Thaps10724;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 528248 528994 . + 0 ID=Thaps10724;Parent=Thaps10724;rank=1 chr17 . exon 528248 528994 . + . ID=Thaps10724.1;Parent=Thaps10724;constitutive=1;rank=1 chr17 . CDS 529100 529125 . + 0 ID=Thaps10724;Parent=Thaps10724;rank=2 chr17 . exon 529100 529125 . + . ID=Thaps10724.2;Parent=Thaps10724;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 529456 530002 . + 0 ID=Thaps10724;Parent=Thaps10724;rank=3 chr17 . exon 529456 530002 . + . ID=Thaps10724.3;Parent=Thaps10724;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . exon 520088 520658 . + . ID=Thaps13884.4;Parent=Thaps13884;constitutive=1;ensembl_end_phase=1;rank=4 chr17 . exon 520756 520883 . + . ID=Thaps13884.5;Parent=Thaps13884;constitutive=1;ensembl_end_phase=2;rank=5 chr17 ensembl protein_coding_gene 521512 521784 . - . ID=Thaps37854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC0];external_name=Thaps37854;logic_name=jgi_thaps3 chr17 ensembl transcript 521512 521784 . - . ID=Thaps37854;Parent=Thaps37854;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 521512 521784 . - 0 ID=Thaps37854;Parent=Thaps37854;rank=1 chr17 . exon 521512 521784 . - . ID=Thaps37854.1;Parent=Thaps37854;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 537248 537651 . - . ID=Thaps20349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC5];external_name=Thaps20349;logic_name=jgi_thaps3 chr17 ensembl transcript 537248 537651 . - . ID=Thaps20349;Parent=Thaps20349;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 537248 537467 . - 0 ID=Thaps20349;Parent=Thaps20349;rank=2 chr17 . exon 537248 537467 . - . ID=Thaps20349.2;Parent=Thaps20349;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 537599 537651 . - 0 ID=Thaps20349;Parent=Thaps20349;rank=1 chr17 . exon 537599 537651 . - . ID=Thaps20349.1;Parent=Thaps20349;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 530702 533666 . + . ID=Thaps25299;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC4];external_name=Thaps25299;logic_name=jgi_thaps3 chr17 ensembl transcript 530702 533666 . + . ID=Thaps25299;Parent=Thaps25299;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 530702 531391 . + 0 ID=Thaps25299;Parent=Thaps25299;rank=1 chr17 . exon 530702 531391 . + . ID=Thaps25299.1;Parent=Thaps25299;constitutive=1;rank=1 chr17 . CDS 531540 532611 . + 0 ID=Thaps25299;Parent=Thaps25299;rank=2 chr17 . exon 531540 532611 . + . ID=Thaps25299.2;Parent=Thaps25299;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 532702 533666 . + 0 ID=Thaps25299;Parent=Thaps25299;rank=3 chr17 . exon 532702 533666 . + . ID=Thaps25299.3;Parent=Thaps25299;constitutive=1;ensembl_end_phase=2;rank=3 chr17 ensembl protein_coding_gene 539525 540534 . + . ID=Thaps25302;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC6];external_name=Thaps25302;logic_name=jgi_thaps3 chr17 ensembl transcript 539525 540534 . + . ID=Thaps25302;Parent=Thaps25302;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 539525 539906 . + 0 ID=Thaps25302;Parent=Thaps25302;rank=1 chr17 . exon 539525 539906 . + . ID=Thaps25302.1;Parent=Thaps25302;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 539931 540175 . + 0 ID=Thaps25302;Parent=Thaps25302;rank=2 chr17 . exon 539931 540175 . + . ID=Thaps25302.2;Parent=Thaps25302;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 540271 540534 . + 0 ID=Thaps25302;Parent=Thaps25302;rank=3 chr17 ensembl tRNA_gene 546032 546103 . - . ID=EPrTPOG00000000091;biotype=tRNA;description=tRNA-Met for anticodon CAU [Source:TRNASCAN_SE%3BAcc:tRNA-Met];external_name=tRNA-Met;logic_name=ncrna_eg chr17 ensembl transcript 546032 546103 . - . ID=EPrTPOT00000000091;Parent=EPrTPOG00000000091;biotype=tRNA;logic_name=ncrna_eg chr17 . exon 546032 546103 . - . ID=EPrTPOE00000000091;Parent=EPrTPOT00000000091;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 546190 546981 . + . ID=Thaps10731;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC9];external_name=Thaps10731;logic_name=jgi_thaps3 chr17 ensembl transcript 546190 546981 . + . ID=Thaps10731;Parent=Thaps10731;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 546190 546981 . + 0 ID=Thaps10731;Parent=Thaps10731;rank=1 chr17 . exon 546190 546981 . + . ID=Thaps10731.1;Parent=Thaps10731;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 547254 548810 . - . ID=Thaps10732;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CED0];external_name=Thaps10732;logic_name=jgi_thaps3 chr17 ensembl transcript 547254 548810 . - . ID=Thaps10732;Parent=Thaps10732;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 547254 548810 . - 0 ID=Thaps10732;Parent=Thaps10732;rank=1 chr17 . exon 547254 548810 . - . ID=Thaps10732.1;Parent=Thaps10732;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 542181 542564 . + . ID=Thaps19598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC7];external_name=Thaps19598;logic_name=jgi_thaps3 chr17 ensembl transcript 542181 542564 . + . ID=Thaps19598;Parent=Thaps19598;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 542181 542564 . + 0 ID=Thaps19598;Parent=Thaps19598;rank=1 chr17 . exon 542181 542564 . + . ID=Thaps19598.1;Parent=Thaps19598;constitutive=1;rank=1 chr17 . exon 540271 540534 . + . ID=Thaps25302.3;Parent=Thaps25302;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 549226 551011 . + . ID=Thaps25304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CED1];external_name=Thaps25304;logic_name=jgi_thaps3 chr17 ensembl transcript 549226 551011 . + . ID=Thaps25304;Parent=Thaps25304;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 549226 549603 . + 0 ID=Thaps25304;Parent=Thaps25304;rank=1 chr17 . exon 549226 549603 . + . ID=Thaps25304.1;Parent=Thaps25304;constitutive=1;rank=1 chr17 . CDS 549770 551011 . + 0 ID=Thaps25304;Parent=Thaps25304;rank=2 chr17 . exon 549770 551011 . + . ID=Thaps25304.2;Parent=Thaps25304;constitutive=1;rank=2 chr17 ensembl protein_coding_gene 544809 545633 . + . ID=Thaps37928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEC8];external_name=Thaps37928;logic_name=jgi_thaps3 chr17 ensembl transcript 544809 545633 . + . ID=Thaps37928;Parent=Thaps37928;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 544809 545633 . + 0 ID=Thaps37928;Parent=Thaps37928;rank=1 chr17 . exon 544809 545633 . + . ID=Thaps37928.1;Parent=Thaps37928;constitutive=1;rank=1 chr17 . repeat_region 552934 552978 . ? . description=trf chr17 . repeat_region 552937 552978 . ? . description=dust chr17 . repeat_region 556539 556548 . ? . description=dust chr17 . repeat_region 558642 558671 . ? . description=dust chr17 ensembl protein_coding_gene 553389 556507 . + . ID=Thaps25306;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CED2];external_name=Thaps25306;logic_name=jgi_thaps3 chr17 ensembl transcript 553389 556507 . + . ID=Thaps25306;Parent=Thaps25306;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 553389 554047 . + 0 ID=Thaps25306;Parent=Thaps25306;rank=1 chr17 . exon 553389 554047 . + . ID=Thaps25306.1;Parent=Thaps25306;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 554164 555431 . + 0 ID=Thaps25306;Parent=Thaps25306;rank=2 chr17 . exon 554164 555431 . + . ID=Thaps25306.2;Parent=Thaps25306;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 555519 556507 . + 0 ID=Thaps25306;Parent=Thaps25306;rank=3 chr17 . exon 555519 556507 . + . ID=Thaps25306.3;Parent=Thaps25306;constitutive=1;ensembl_end_phase=2;rank=3 chr17 ensembl protein_coding_gene 557287 560226 . + . ID=Thaps25307;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CED3];external_name=Thaps25307;logic_name=jgi_thaps3 chr17 ensembl transcript 557287 560226 . + . ID=Thaps25307;Parent=Thaps25307;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 557287 557578 . + 0 ID=Thaps25307;Parent=Thaps25307;rank=1 chr17 . exon 557287 557578 . + . ID=Thaps25307.1;Parent=Thaps25307;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 557667 557781 . + 0 ID=Thaps25307;Parent=Thaps25307;rank=2 chr17 . exon 557667 557781 . + . ID=Thaps25307.2;Parent=Thaps25307;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 557900 558211 . + 0 ID=Thaps25307;Parent=Thaps25307;rank=3 chr17 . exon 557900 558211 . + . ID=Thaps25307.3;Parent=Thaps25307;constitutive=1;rank=3 chr17 . CDS 558289 558618 . + 0 ID=Thaps25307;Parent=Thaps25307;rank=4 chr17 . exon 558289 558618 . + . ID=Thaps25307.4;Parent=Thaps25307;constitutive=1;rank=4 chr17 . CDS 558723 558802 . + 0 ID=Thaps25307;Parent=Thaps25307;rank=5 chr17 . exon 558723 558802 . + . ID=Thaps25307.5;Parent=Thaps25307;constitutive=1;ensembl_end_phase=2;rank=5 chr17 . CDS 558989 559229 . + 0 ID=Thaps25307;Parent=Thaps25307;rank=6 chr17 . exon 558989 559229 . + . ID=Thaps25307.6;Parent=Thaps25307;constitutive=1;ensembl_end_phase=1;rank=6 chr17 . CDS 559335 559459 . + 0 ID=Thaps25307;Parent=Thaps25307;rank=7 chr17 . exon 559335 559459 . + . ID=Thaps25307.7;Parent=Thaps25307;constitutive=1;ensembl_end_phase=2;rank=7 chr17 . CDS 559535 560226 . + 0 ID=Thaps25307;Parent=Thaps25307;rank=8 chr17 . exon 559535 560226 . + . ID=Thaps25307.8;Parent=Thaps25307;constitutive=1;ensembl_end_phase=2;rank=8 chr17 ensembl protein_coding_gene 564739 566802 . + . ID=Thaps10738;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CED5];external_name=Thaps10738;logic_name=jgi_thaps3 chr17 ensembl transcript 564739 566802 . + . ID=Thaps10738;Parent=Thaps10738;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 564739 565475 . + 0 ID=Thaps10738;Parent=Thaps10738;rank=1 chr17 . exon 564739 565475 . + . ID=Thaps10738.1;Parent=Thaps10738;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 565569 565793 . + 0 ID=Thaps10738;Parent=Thaps10738;rank=2 chr17 . exon 565569 565793 . + . ID=Thaps10738.2;Parent=Thaps10738;constitutive=1;rank=2 chr17 . CDS 565863 566010 . + 0 ID=Thaps10738;Parent=Thaps10738;rank=3 chr17 . exon 565863 566010 . + . ID=Thaps10738.3;Parent=Thaps10738;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 566083 566802 . + 0 ID=Thaps10738;Parent=Thaps10738;rank=4 chr17 . exon 566083 566802 . + . ID=Thaps10738.4;Parent=Thaps10738;constitutive=1;rank=4 chr17 ensembl protein_coding_gene 569834 570759 . + . ID=Thaps10740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CED7];external_name=Thaps10740;logic_name=jgi_thaps3 chr17 ensembl transcript 569834 570759 . + . ID=Thaps10740;Parent=Thaps10740;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 569834 569924 . + 0 ID=Thaps10740;Parent=Thaps10740;rank=1 chr17 . exon 569834 569924 . + . ID=Thaps10740.1;Parent=Thaps10740;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 570074 570759 . + 0 ID=Thaps10740;Parent=Thaps10740;rank=2 chr17 ensembl protein_coding_gene 561087 563518 . + . ID=Thaps25308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CED4];external_name=Thaps25308;logic_name=jgi_thaps3 chr17 ensembl transcript 561087 563518 . + . ID=Thaps25308;Parent=Thaps25308;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 561087 561998 . + 0 ID=Thaps25308;Parent=Thaps25308;rank=1 chr17 . exon 561087 561998 . + . ID=Thaps25308.1;Parent=Thaps25308;constitutive=1;rank=1 chr17 . CDS 562133 562787 . + 0 ID=Thaps25308;Parent=Thaps25308;rank=2 chr17 . exon 562133 562787 . + . ID=Thaps25308.2;Parent=Thaps25308;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 562860 563096 . + 0 ID=Thaps25308;Parent=Thaps25308;rank=3 chr17 . exon 562860 563096 . + . ID=Thaps25308.3;Parent=Thaps25308;constitutive=1;rank=3 chr17 . CDS 563183 563373 . + 0 ID=Thaps25308;Parent=Thaps25308;rank=4 chr17 . exon 563183 563373 . + . ID=Thaps25308.4;Parent=Thaps25308;constitutive=1;ensembl_end_phase=2;rank=4 chr17 . CDS 563432 563518 . + 0 ID=Thaps25308;Parent=Thaps25308;rank=5 chr17 . exon 563432 563518 . + . ID=Thaps25308.5;Parent=Thaps25308;constitutive=1;rank=5 chr17 ensembl protein_coding_gene 567139 569590 . - . ID=Thaps25309;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CED6];external_name=Thaps25309;logic_name=jgi_thaps3 chr17 ensembl transcript 567139 569590 . - . ID=Thaps25309;Parent=Thaps25309;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 567139 567249 . - 0 ID=Thaps25309;Parent=Thaps25309;rank=3 chr17 . exon 567139 567249 . - . ID=Thaps25309.3;Parent=Thaps25309;constitutive=1;rank=3 chr17 . CDS 567275 568148 . - 0 ID=Thaps25309;Parent=Thaps25309;rank=2 chr17 . exon 567275 568148 . - . ID=Thaps25309.2;Parent=Thaps25309;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 568206 569590 . - 0 ID=Thaps25309;Parent=Thaps25309;rank=1 chr17 . exon 568206 569590 . - . ID=Thaps25309.1;Parent=Thaps25309;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . repeat_region 578365 579233 . - . description=TE2c_TP chr17 . repeat_region 578408 578466 . ? . description=trf chr17 . repeat_region 578719 578773 . ? . description=trf chr17 . repeat_region 578934 578941 . ? . description=dust chr17 . exon 570074 570759 . + . ID=Thaps10740.2;Parent=Thaps10740;constitutive=1;ensembl_end_phase=2;rank=2 chr17 ensembl protein_coding_gene 571726 572587 . + . ID=Thaps10741;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CED8];external_name=Thaps10741;logic_name=jgi_thaps3 chr17 ensembl transcript 571726 572587 . + . ID=Thaps10741;Parent=Thaps10741;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 571726 571867 . + 0 ID=Thaps10741;Parent=Thaps10741;rank=1 chr17 . exon 571726 571867 . + . ID=Thaps10741.1;Parent=Thaps10741;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 572173 572199 . + 0 ID=Thaps10741;Parent=Thaps10741;rank=2 chr17 . exon 572173 572199 . + . ID=Thaps10741.2;Parent=Thaps10741;constitutive=1;rank=2 chr17 . CDS 572331 572587 . + 0 ID=Thaps10741;Parent=Thaps10741;rank=3 chr17 . exon 572331 572587 . + . ID=Thaps10741.3;Parent=Thaps10741;constitutive=1;ensembl_end_phase=2;rank=3 chr17 ensembl protein_coding_gene 573008 574470 . - . ID=Thaps37974;biotype=protein_coding;description=Sugar transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CED9];external_name=Thaps37974;logic_name=jgi_thaps3 chr17 ensembl transcript 573008 574470 . - . ID=Thaps37974;Parent=Thaps37974;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 573008 573191 . - 0 ID=Thaps37974;Parent=Thaps37974;rank=3 chr17 . exon 573008 573191 . - . ID=Thaps37974.3;Parent=Thaps37974;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . CDS 573289 574031 . - 0 ID=Thaps37974;Parent=Thaps37974;rank=2 chr17 . exon 573289 574031 . - . ID=Thaps37974.2;Parent=Thaps37974;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 574117 574470 . - 0 ID=Thaps37974;Parent=Thaps37974;rank=1 chr17 . exon 574117 574470 . - . ID=Thaps37974.1;Parent=Thaps37974;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 575188 577902 . + . ID=Thaps42704;biotype=protein_coding;description=3-isopropylmalate dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8CEE0];external_name=LEU2;logic_name=jgi_thaps3 chr17 ensembl transcript 575188 577902 . + . ID=Thaps42704;Parent=Thaps42704;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 575188 575796 . + 0 ID=Thaps42704;Parent=Thaps42704;rank=1 chr17 . exon 575188 575796 . + . ID=Thaps42704.1;Parent=Thaps42704;constitutive=1;rank=1 chr17 . CDS 575993 577564 . + 0 ID=Thaps42704;Parent=Thaps42704;rank=2 chr17 . exon 575993 577564 . + . ID=Thaps42704.2;Parent=Thaps42704;constitutive=1;rank=2 chr17 . CDS 577663 577902 . + 0 ID=Thaps42704;Parent=Thaps42704;rank=3 chr17 . exon 577663 577902 . + . ID=Thaps42704.3;Parent=Thaps42704;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 580358 583301 . + . ID=Thaps10744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEE1];external_name=Thaps10744;logic_name=jgi_thaps3 chr17 ensembl transcript 580358 583301 . + . ID=Thaps10744;Parent=Thaps10744;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 580358 580981 . + 0 ID=Thaps10744;Parent=Thaps10744;rank=1 chr17 . exon 580358 580981 . + . ID=Thaps10744.1;Parent=Thaps10744;constitutive=1;rank=1 chr17 . CDS 581088 581506 . + 0 ID=Thaps10744;Parent=Thaps10744;rank=2 chr17 . exon 581088 581506 . + . ID=Thaps10744.2;Parent=Thaps10744;constitutive=1;ensembl_end_phase=2;rank=2 chr17 . CDS 581612 583301 . + 0 ID=Thaps10744;Parent=Thaps10744;rank=3 chr17 . exon 581612 583301 . + . ID=Thaps10744.3;Parent=Thaps10744;constitutive=1;ensembl_end_phase=1;rank=3 chr17 ensembl protein_coding_gene 589456 591298 . - . ID=Thaps10747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY3];external_name=Thaps10747;logic_name=jgi_thaps3 chr17 ensembl transcript 589456 591298 . - . ID=Thaps10747;Parent=Thaps10747;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 589456 589653 . - 0 ID=Thaps10747;Parent=Thaps10747;rank=5 chr17 . exon 589456 589653 . - . ID=Thaps10747.5;Parent=Thaps10747;constitutive=1;rank=5 chr17 . CDS 589737 589823 . - 0 ID=Thaps10747;Parent=Thaps10747;rank=4 chr17 . exon 589737 589823 . - . ID=Thaps10747.4;Parent=Thaps10747;constitutive=1;rank=4 chr17 . CDS 589910 590167 . - 0 ID=Thaps10747;Parent=Thaps10747;rank=3 chr17 . exon 589910 590167 . - . ID=Thaps10747.3;Parent=Thaps10747;constitutive=1;rank=3 chr17 . CDS 590427 590540 . - 0 ID=Thaps10747;Parent=Thaps10747;rank=2 chr17 . CDS 590951 591298 . - 0 ID=Thaps10747;Parent=Thaps10747;rank=1 chr17 ensembl protein_coding_gene 588129 588677 . - . ID=Thaps18047;biotype=protein_coding;description=Dolichylpyrophosphate phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8CEE4];external_name=Thaps18047;logic_name=jgi_thaps3 chr17 ensembl transcript 588129 588677 . - . ID=Thaps18047;Parent=Thaps18047;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 588129 588323 . - 0 ID=Thaps18047;Parent=Thaps18047;rank=2 chr17 . exon 588129 588323 . - . ID=Thaps18047.2;Parent=Thaps18047;constitutive=1;rank=2 chr17 . CDS 588426 588677 . - 0 ID=Thaps18047;Parent=Thaps18047;rank=1 chr17 . exon 588426 588677 . - . ID=Thaps18047.1;Parent=Thaps18047;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 584133 585575 . - . ID=Thaps25311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEE2];external_name=Thaps25311;logic_name=jgi_thaps3 chr17 ensembl transcript 584133 585575 . - . ID=Thaps25311;Parent=Thaps25311;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 584133 585575 . - 0 ID=Thaps25311;Parent=Thaps25311;rank=1 chr17 . exon 584133 585575 . - . ID=Thaps25311.1;Parent=Thaps25311;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 586030 587242 . + . ID=Thaps25312;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEE3];external_name=Thaps25312;logic_name=jgi_thaps3 chr17 ensembl transcript 586030 587242 . + . ID=Thaps25312;Parent=Thaps25312;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 586030 586052 . + 0 ID=Thaps25312;Parent=Thaps25312;rank=1 chr17 . exon 586030 586052 . + . ID=Thaps25312.1;Parent=Thaps25312;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 586330 587242 . + 0 ID=Thaps25312;Parent=Thaps25312;rank=2 chr17 . exon 586330 587242 . + . ID=Thaps25312.2;Parent=Thaps25312;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . repeat_region 590583 590937 . - . description=Copia5ALTR_TP chr17 . exon 590427 590540 . - . ID=Thaps10747.2;Parent=Thaps10747;constitutive=1;rank=2 chr17 . exon 590951 591298 . - . ID=Thaps10747.1;Parent=Thaps10747;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 597231 603216 . - . ID=Thaps10749;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY1];external_name=Thaps10749;logic_name=jgi_thaps3 chr17 ensembl transcript 597231 603216 . - . ID=Thaps10749;Parent=Thaps10749;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 597231 597249 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=13 chr17 . exon 597231 597249 . - . ID=Thaps10749.13;Parent=Thaps10749;constitutive=1;ensembl_end_phase=1;rank=13 chr17 . CDS 597321 598546 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=12 chr17 . exon 597321 598546 . - . ID=Thaps10749.12;Parent=Thaps10749;constitutive=1;ensembl_end_phase=2;rank=12 chr17 . CDS 598830 598913 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=11 chr17 . exon 598830 598913 . - . ID=Thaps10749.11;Parent=Thaps10749;constitutive=1;rank=11 chr17 . CDS 599070 599240 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=10 chr17 . exon 599070 599240 . - . ID=Thaps10749.10;Parent=Thaps10749;constitutive=1;rank=10 chr17 . CDS 599314 599347 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=9 chr17 . exon 599314 599347 . - . ID=Thaps10749.9;Parent=Thaps10749;constitutive=1;ensembl_end_phase=1;rank=9 chr17 . CDS 599449 599782 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=8 chr17 . exon 599449 599782 . - . ID=Thaps10749.8;Parent=Thaps10749;constitutive=1;ensembl_end_phase=1;rank=8 chr17 . CDS 599852 599904 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=7 chr17 . exon 599852 599904 . - . ID=Thaps10749.7;Parent=Thaps10749;constitutive=1;ensembl_end_phase=2;rank=7 chr17 . CDS 599979 601024 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=6 chr17 . CDS 601103 601142 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=5 chr17 . CDS 601287 601388 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=4 chr17 . CDS 601480 601677 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=3 chr17 . CDS 601761 602444 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=2 chr17 . CDS 602534 603216 . - 0 ID=Thaps10749;Parent=Thaps10749;rank=1 chr17 ensembl protein_coding_gene 595340 596742 . + . ID=Thaps14370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY2];external_name=Thaps14370;logic_name=jgi_thaps3 chr17 ensembl transcript 595340 596742 . + . ID=Thaps14370;Parent=Thaps14370;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 595340 595412 . + 0 ID=Thaps14370;Parent=Thaps14370;rank=1 chr17 . exon 595340 595412 . + . ID=Thaps14370.1;Parent=Thaps14370;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 595506 595667 . + 0 ID=Thaps14370;Parent=Thaps14370;rank=2 chr17 . exon 595506 595667 . + . ID=Thaps14370.2;Parent=Thaps14370;constitutive=1;rank=2 chr17 . CDS 595749 595987 . + 0 ID=Thaps14370;Parent=Thaps14370;rank=3 chr17 . exon 595749 595987 . + . ID=Thaps14370.3;Parent=Thaps14370;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 596066 596188 . + 0 ID=Thaps14370;Parent=Thaps14370;rank=4 chr17 . exon 596066 596188 . + . ID=Thaps14370.4;Parent=Thaps14370;constitutive=1;rank=4 chr17 . CDS 596307 596389 . + 0 ID=Thaps14370;Parent=Thaps14370;rank=5 chr17 . exon 596307 596389 . + . ID=Thaps14370.5;Parent=Thaps14370;constitutive=1;ensembl_end_phase=2;rank=5 chr17 . CDS 596472 596742 . + 0 ID=Thaps14370;Parent=Thaps14370;rank=6 chr17 . exon 596472 596742 . + . ID=Thaps14370.6;Parent=Thaps14370;constitutive=1;ensembl_end_phase=1;rank=6 chr17 . repeat_region 601409 601429 . ? . description=trf chr17 . repeat_region 603381 603454 . ? . description=trf chr17 . repeat_region 605233 605439 . - . description=TE2c_TP chr17 . repeat_region 605277 605465 . + . description=TE2c_TP chr17 . repeat_region 605440 605490 . ? . description=dust chr17 . repeat_region 606088 606306 . - . description=tp13_ASNotSingleton chr17 . repeat_region 606845 607241 . + . description=TE2c_TP chr17 . repeat_region 606847 606916 . ? . description=trf chr17 . repeat_region 607279 607582 . + . description=TE2c_TP chr17 . repeat_region 607357 607415 . ? . description=trf chr17 . exon 599979 601024 . - . ID=Thaps10749.6;Parent=Thaps10749;constitutive=1;ensembl_end_phase=2;rank=6 chr17 . exon 601103 601142 . - . ID=Thaps10749.5;Parent=Thaps10749;constitutive=1;ensembl_end_phase=1;rank=5 chr17 . exon 601287 601388 . - . ID=Thaps10749.4;Parent=Thaps10749;constitutive=1;rank=4 chr17 . exon 601480 601677 . - . ID=Thaps10749.3;Parent=Thaps10749;constitutive=1;rank=3 chr17 . exon 601761 602444 . - . ID=Thaps10749.2;Parent=Thaps10749;constitutive=1;rank=2 chr17 . exon 602534 603216 . - . ID=Thaps10749.1;Parent=Thaps10749;constitutive=1;ensembl_end_phase=2;rank=1 chr17 ensembl protein_coding_gene 607738 609845 . + . ID=Thaps10750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY0];external_name=Thaps10750;logic_name=jgi_thaps3 chr17 ensembl transcript 607738 609845 . + . ID=Thaps10750;Parent=Thaps10750;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 607738 608640 . + 0 ID=Thaps10750;Parent=Thaps10750;rank=1 chr17 . exon 607738 608640 . + . ID=Thaps10750.1;Parent=Thaps10750;constitutive=1;rank=1 chr17 . CDS 608753 609574 . + 0 ID=Thaps10750;Parent=Thaps10750;rank=2 chr17 . exon 608753 609574 . + . ID=Thaps10750.2;Parent=Thaps10750;constitutive=1;rank=2 chr17 . CDS 609660 609845 . + 0 ID=Thaps10750;Parent=Thaps10750;rank=3 chr17 . exon 609660 609845 . + . ID=Thaps10750.3;Parent=Thaps10750;constitutive=1;rank=3 chr17 ensembl protein_coding_gene 617242 618660 . + . ID=Thaps10752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF0];external_name=Thaps10752;logic_name=jgi_thaps3 chr17 ensembl transcript 617242 618660 . + . ID=Thaps10752;Parent=Thaps10752;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 617242 618660 . + 0 ID=Thaps10752;Parent=Thaps10752;rank=1 chr17 . exon 617242 618660 . + . ID=Thaps10752.1;Parent=Thaps10752;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 618964 625480 . + . ID=Thaps10753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF1];external_name=Thaps10753;logic_name=jgi_thaps3 chr17 ensembl transcript 618964 625480 . + . ID=Thaps10753;Parent=Thaps10753;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 618964 623302 . + 0 ID=Thaps10753;Parent=Thaps10753;rank=1 chr17 . exon 618964 623302 . + . ID=Thaps10753.1;Parent=Thaps10753;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . CDS 623387 624683 . + 0 ID=Thaps10753;Parent=Thaps10753;rank=2 chr17 . CDS 624778 625480 . + 0 ID=Thaps10753;Parent=Thaps10753;rank=3 chr17 ensembl protein_coding_gene 610816 611503 . - . ID=Thaps269925;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEE9];external_name=Thaps269925;logic_name=jgi_thaps3 chr17 ensembl transcript 610816 611503 . - . ID=Thaps269925;Parent=Thaps269925;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 610816 611054 . - 0 ID=Thaps269925;Parent=Thaps269925;rank=3 chr17 . exon 610816 611054 . - . ID=Thaps269925.3;Parent=Thaps269925;constitutive=1;ensembl_end_phase=2;rank=3 chr17 . CDS 611139 611286 . - 0 ID=Thaps269925;Parent=Thaps269925;rank=2 chr17 . exon 611139 611286 . - . ID=Thaps269925.2;Parent=Thaps269925;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . CDS 611354 611503 . - 0 ID=Thaps269925;Parent=Thaps269925;rank=1 chr17 . exon 611354 611503 . - . ID=Thaps269925.1;Parent=Thaps269925;constitutive=1;rank=1 chr17 . repeat_region 619901 619959 . ? . description=dust chr17 . repeat_region 626906 630518 . + . description=Harbinger1_TP chr17 . repeat_region 627047 627082 . ? . description=trf chr17 . repeat_region 628806 628887 . ? . description=trf chr17 . exon 623387 624683 . + . ID=Thaps10753.2;Parent=Thaps10753;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . exon 624778 625480 . + . ID=Thaps10753.3;Parent=Thaps10753;constitutive=1;ensembl_end_phase=1;rank=3 chr17 . repeat_region 632229 633761 . - . description=tp9_ASNotSingleton chr17 . repeat_region 638052 641701 . - . description=RTE1_TP chr17 ensembl protein_coding_gene 635018 636840 . + . ID=Thaps10754;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF2];external_name=Thaps10754;logic_name=jgi_thaps3 chr17 ensembl transcript 635018 636840 . + . ID=Thaps10754;Parent=Thaps10754;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 635018 636501 . + 0 ID=Thaps10754;Parent=Thaps10754;rank=1 chr17 . exon 635018 636501 . + . ID=Thaps10754.1;Parent=Thaps10754;constitutive=1;ensembl_end_phase=2;rank=1 chr17 . CDS 636678 636840 . + 0 ID=Thaps10754;Parent=Thaps10754;rank=2 chr17 . exon 636678 636840 . + . ID=Thaps10754.2;Parent=Thaps10754;constitutive=1;ensembl_end_phase=1;rank=2 chr17 . repeat_region 643099 643124 . ? . description=trf chr17 . repeat_region 647280 647604 . ? . description=dust chr17 . repeat_region 647281 647597 . ? . description=trf chr17 . repeat_region 647303 647597 . ? . description=trf chr17 . repeat_region 647758 647778 . ? . description=trf chr17 . repeat_region 647915 647935 . ? . description=trf chr17 . repeat_region 648098 648522 . ? . description=trf chr17 . repeat_region 648160 648255 . ? . description=trf chr17 . repeat_region 648208 648850 . ? . description=trf chr17 . repeat_region 648358 648453 . ? . description=trf chr17 . repeat_region 648536 649129 . ? . description=trf chr17 . repeat_region 648686 648781 . ? . description=trf chr17 . repeat_region 648884 648979 . ? . description=trf chr17 . repeat_region 648932 649279 . ? . description=trf chr17 . repeat_region 649232 649327 . ? . description=trf chr17 . repeat_region 656926 657333 . - . description=RTE1_TP chr17 . repeat_region 659193 659924 . + . description=tp1_ASNotSingleton chr17 ensembl rRNA_gene 651043 652846 . + . ID=EPrTPOG00000000080;biotype=rRNA;description=18s_rRNA [Source:RNAMMER%3BAcc:18s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr17 ensembl rRNA 651043 652846 . + . ID=EPrTPOT00000000080;Parent=EPrTPOG00000000080;biotype=rRNA;logic_name=ncrna_eg chr17 ensembl rRNA_gene 653090 657232 . + . ID=EPrTPOG00000000109;biotype=rRNA;description=28s_rRNA [Source:RNAMMER%3BAcc:28s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr17 ensembl rRNA 653090 657232 . + . ID=EPrTPOT00000000109;Parent=EPrTPOG00000000109;biotype=rRNA;logic_name=ncrna_eg chr17 . exon 651043 652846 . + . ID=EPrTPOE00000000080;Parent=EPrTPOT00000000080;constitutive=1;ensembl_end_phase=1;rank=1 chr17 . exon 653090 657232 . + . ID=EPrTPOE00000000109;Parent=EPrTPOT00000000109;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 653094 653333 . - . ID=Thaps30335;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF4];external_name=Thaps30335;logic_name=jgi_thaps3 chr17 ensembl transcript 653094 653333 . - . ID=Thaps30335;Parent=Thaps30335;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 653094 653333 . - 0 ID=Thaps30335;Parent=Thaps30335;rank=1 chr17 . exon 653094 653333 . - . ID=Thaps30335.1;Parent=Thaps30335;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 652017 652226 . + . ID=Thaps37880;biotype=protein_coding;description=rRNA intron-encoded homing endonuclease [Source:UniProtKB/TrEMBL%3BAcc:B8CEF3];external_name=Thaps37880;logic_name=jgi_thaps3 chr17 ensembl transcript 652017 652226 . + . ID=Thaps37880;Parent=Thaps37880;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 652017 652226 . + 0 ID=Thaps37880;Parent=Thaps37880;rank=1 chr17 . exon 652017 652226 . + . ID=Thaps37880.1;Parent=Thaps37880;constitutive=1;rank=1 chr17 ensembl protein_coding_gene 656086 656262 . - . ID=Thaps37959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF5];external_name=Thaps37959;logic_name=jgi_thaps3 chr17 ensembl transcript 656086 656262 . - . ID=Thaps37959;Parent=Thaps37959;biotype=protein_coding;logic_name=jgi_thaps3 chr17 . CDS 656086 656262 . - 0 ID=Thaps37959;Parent=Thaps37959;rank=1 chr17 . exon 656086 656262 . - . ID=Thaps37959.1;Parent=Thaps37959;constitutive=1;rank=1 ##gff-version 3 ##sequence-region 20 1 800234 chr20 . repeat_region 1 234 . ? . description=dust chr20 . repeat_region 1 235 . ? . description=trf chr20 . repeat_region 4223 4261 . ? . description=trf chr20 . repeat_region 5626 5721 . ? . description=dust chr20 . repeat_region 5626 5737 . ? . description=trf chr20 . repeat_region 5824 5863 . ? . description=trf chr20 . repeat_region 7620 7828 . ? . description=dust chr20 . repeat_region 7637 7829 . ? . description=trf chr20 . repeat_region 7830 7901 . ? . description=trf chr20 . repeat_region 8102 8205 . ? . description=trf chr20 . repeat_region 8102 8221 . ? . description=dust chr20 . repeat_region 8626 8671 . ? . description=trf chr20 . repeat_region 8626 8671 . ? . description=dust chr20 . repeat_region 9803 9961 . + . description=SAT1_TP chr20 . repeat_region 9872 10799 . ? . description=trf chr20 . repeat_region 9872 10799 . ? . description=trf chr20 ensembl protein_coding_gene 874 4252 . - . ID=Thaps11405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF6];external_name=Thaps11405;logic_name=jgi_thaps3 chr20 ensembl transcript 874 4252 . - . ID=Thaps11405;Parent=Thaps11405;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 874 879 . - 0 ID=Thaps11405;Parent=Thaps11405;rank=3 chr20 . exon 874 879 . - . ID=Thaps11405.3;Parent=Thaps11405;constitutive=1;rank=3 chr20 . CDS 1190 3300 . - 0 ID=Thaps11405;Parent=Thaps11405;rank=2 chr20 . exon 1190 3300 . - . ID=Thaps11405.2;Parent=Thaps11405;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 3376 4252 . - 0 ID=Thaps11405;Parent=Thaps11405;rank=1 chr20 . exon 3376 4252 . - . ID=Thaps11405.1;Parent=Thaps11405;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 9744 10399 . + . ID=Thaps264660;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF7];external_name=Thaps264660;logic_name=jgi_thaps3 chr20 ensembl transcript 9744 10399 . + . ID=Thaps264660;Parent=Thaps264660;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 9744 10399 . + 0 ID=Thaps264660;Parent=Thaps264660;rank=1 chr20 . exon 9744 10399 . + . ID=Thaps264660.1;Parent=Thaps264660;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 11632 12344 . + . ID=Thaps11407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF8];external_name=Thaps11407;logic_name=jgi_thaps3 chr20 ensembl transcript 11632 12344 . + . ID=Thaps11407;Parent=Thaps11407;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 11632 11684 . + 0 ID=Thaps11407;Parent=Thaps11407;rank=1 chr20 . exon 11632 11684 . + . ID=Thaps11407.1;Parent=Thaps11407;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 11781 11812 . + 0 ID=Thaps11407;Parent=Thaps11407;rank=2 chr20 . exon 11781 11812 . + . ID=Thaps11407.2;Parent=Thaps11407;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 11954 12035 . + 0 ID=Thaps11407;Parent=Thaps11407;rank=3 chr20 . exon 11954 12035 . + . ID=Thaps11407.3;Parent=Thaps11407;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 12140 12344 . + 0 ID=Thaps11407;Parent=Thaps11407;rank=4 chr20 . exon 12140 12344 . + . ID=Thaps11407.4;Parent=Thaps11407;constitutive=1;ensembl_end_phase=1;rank=4 chr20 ensembl protein_coding_gene 13097 14947 . - . ID=Thaps11408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEF9];external_name=Thaps11408;logic_name=jgi_thaps3 chr20 ensembl transcript 13097 14947 . - . ID=Thaps11408;Parent=Thaps11408;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 13097 14947 . - 0 ID=Thaps11408;Parent=Thaps11408;rank=1 chr20 . exon 13097 14947 . - . ID=Thaps11408.1;Parent=Thaps11408;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 15198 16070 . - . ID=Thaps11409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEG0];external_name=Thaps11409;logic_name=jgi_thaps3 chr20 ensembl transcript 15198 16070 . - . ID=Thaps11409;Parent=Thaps11409;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 15198 16070 . - 0 ID=Thaps11409;Parent=Thaps11409;rank=1 chr20 . exon 15198 16070 . - . ID=Thaps11409.1;Parent=Thaps11409;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 16605 20234 . - . ID=Thaps25567;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEG1];external_name=Thaps25567;logic_name=jgi_thaps3 chr20 ensembl transcript 16605 20234 . - . ID=Thaps25567;Parent=Thaps25567;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 16605 17681 . - 0 ID=Thaps25567;Parent=Thaps25567;rank=5 chr20 . exon 16605 17681 . - . ID=Thaps25567.5;Parent=Thaps25567;constitutive=1;rank=5 chr20 . CDS 17705 18142 . - 0 ID=Thaps25567;Parent=Thaps25567;rank=4 chr20 . exon 17705 18142 . - . ID=Thaps25567.4;Parent=Thaps25567;constitutive=1;rank=4 chr20 . CDS 18372 18782 . - 0 ID=Thaps25567;Parent=Thaps25567;rank=3 chr20 . exon 18372 18782 . - . ID=Thaps25567.3;Parent=Thaps25567;constitutive=1;rank=3 chr20 . CDS 19098 19738 . - 0 ID=Thaps25567;Parent=Thaps25567;rank=2 chr20 . exon 19098 19738 . - . ID=Thaps25567.2;Parent=Thaps25567;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 19772 20234 . - 0 ID=Thaps25567;Parent=Thaps25567;rank=1 chr20 . repeat_region 20893 20969 . ? . description=trf chr20 . repeat_region 21384 21619 . - . description=TE2c_TP chr20 . repeat_region 21632 22281 . - . description=Harbinger2N_TP chr20 . repeat_region 21703 21879 . ? . description=dust chr20 . repeat_region 21719 21932 . ? . description=trf chr20 . repeat_region 21736 21954 . ? . description=trf chr20 . repeat_region 21891 22048 . ? . description=dust chr20 . repeat_region 21948 22066 . ? . description=trf chr20 . repeat_region 21990 22018 . ? . description=trf chr20 . repeat_region 22282 22479 . + . description=Harbinger4_TP chr20 . repeat_region 22930 23006 . ? . description=trf chr20 . repeat_region 23421 23656 . - . description=TE2c_TP chr20 . repeat_region 23669 24302 . - . description=Harbinger2N_TP chr20 . repeat_region 23715 23900 . ? . description=dust chr20 . repeat_region 23748 23953 . ? . description=trf chr20 . repeat_region 23757 23975 . ? . description=trf chr20 . repeat_region 23911 24063 . ? . description=dust chr20 . repeat_region 23969 24087 . ? . description=trf chr20 . repeat_region 24011 24039 . ? . description=trf chr20 . repeat_region 24303 24500 . + . description=Harbinger4_TP chr20 . repeat_region 24951 25027 . ? . description=trf chr20 . repeat_region 25442 25677 . - . description=TE2c_TP chr20 . repeat_region 25690 26368 . - . description=Harbinger2N_TP chr20 . repeat_region 25761 26019 . ? . description=trf chr20 . repeat_region 25765 25970 . ? . description=dust chr20 . repeat_region 25820 26143 . ? . description=trf chr20 . repeat_region 25987 26143 . ? . description=dust chr20 . repeat_region 26035 26153 . ? . description=trf chr20 . repeat_region 26077 26105 . ? . description=trf chr20 . repeat_region 26369 26566 . + . description=Harbinger4_TP chr20 . repeat_region 27017 27093 . ? . description=trf chr20 . repeat_region 27508 27743 . - . description=TE2c_TP chr20 . repeat_region 27756 28359 . - . description=Harbinger2N_TP chr20 . repeat_region 27812 27984 . ? . description=dust chr20 . repeat_region 27828 27974 . ? . description=trf chr20 . repeat_region 27835 28032 . ? . description=trf chr20 . repeat_region 27882 28077 . ? . description=trf chr20 . repeat_region 28022 28142 . ? . description=trf chr20 . repeat_region 28043 28126 . ? . description=dust chr20 . repeat_region 28068 28096 . ? . description=trf chr20 . repeat_region 28385 28756 . - . description=TE2c_TP chr20 . repeat_region 28574 28581 . ? . description=dust chr20 ensembl protein_coding_gene 29093 31078 . + . ID=Thaps11411;biotype=protein_coding;description=Citrate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CEG2];external_name=CSN1;logic_name=jgi_thaps3 chr20 ensembl transcript 29093 31078 . + . ID=Thaps11411;Parent=Thaps11411;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 29093 29404 . + 0 ID=Thaps11411;Parent=Thaps11411;rank=1 chr20 . exon 29093 29404 . + . ID=Thaps11411.1;Parent=Thaps11411;constitutive=1;rank=1 chr20 . CDS 29969 31078 . + 0 ID=Thaps11411;Parent=Thaps11411;rank=2 chr20 . exon 19772 20234 . - . ID=Thaps25567.1;Parent=Thaps25567;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . exon 29969 31078 . + . ID=Thaps11411.2;Parent=Thaps11411;constitutive=1;rank=2 chr20 ensembl protein_coding_gene 31376 31905 . + . ID=Thaps11412;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEG3];external_name=Thaps11412;logic_name=jgi_thaps3 chr20 ensembl transcript 31376 31905 . + . ID=Thaps11412;Parent=Thaps11412;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 31376 31502 . + 0 ID=Thaps11412;Parent=Thaps11412;rank=1 chr20 . exon 31376 31502 . + . ID=Thaps11412.1;Parent=Thaps11412;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 31592 31905 . + 0 ID=Thaps11412;Parent=Thaps11412;rank=2 chr20 . exon 31592 31905 . + . ID=Thaps11412.2;Parent=Thaps11412;constitutive=1;ensembl_end_phase=2;rank=2 chr20 ensembl protein_coding_gene 38577 39329 . - . ID=Thaps11415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEG6];external_name=Thaps11415;logic_name=jgi_thaps3 chr20 ensembl transcript 38577 39329 . - . ID=Thaps11415;Parent=Thaps11415;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 38577 39329 . - 0 ID=Thaps11415;Parent=Thaps11415;rank=1 chr20 . exon 38577 39329 . - . ID=Thaps11415.1;Parent=Thaps11415;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 37520 37867 . + . ID=Thaps264663;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEG5];external_name=Thaps264663;logic_name=jgi_thaps3 chr20 ensembl transcript 37520 37867 . + . ID=Thaps264663;Parent=Thaps264663;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 37520 37545 . + 0 ID=Thaps264663;Parent=Thaps264663;rank=1 chr20 . exon 37520 37545 . + . ID=Thaps264663.1;Parent=Thaps264663;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 37630 37804 . + 0 ID=Thaps264663;Parent=Thaps264663;rank=2 chr20 . exon 37630 37804 . + . ID=Thaps264663.2;Parent=Thaps264663;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 37823 37867 . + 0 ID=Thaps264663;Parent=Thaps264663;rank=3 chr20 . exon 37823 37867 . + . ID=Thaps264663.3;Parent=Thaps264663;constitutive=1;rank=3 chr20 ensembl protein_coding_gene 32415 33212 . - . ID=Thaps38512;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEG4];external_name=Thaps38512;logic_name=jgi_thaps3 chr20 ensembl transcript 32415 33212 . - . ID=Thaps38512;Parent=Thaps38512;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 32415 32886 . - 0 ID=Thaps38512;Parent=Thaps38512;rank=2 chr20 . exon 32415 32886 . - . ID=Thaps38512.2;Parent=Thaps38512;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 32920 33212 . - 0 ID=Thaps38512;Parent=Thaps38512;rank=1 chr20 . exon 32920 33212 . - . ID=Thaps38512.1;Parent=Thaps38512;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . repeat_region 48517 48544 . ? . description=trf chr20 . repeat_region 48517 48544 . ? . description=dust chr20 . repeat_region 49299 49322 . ? . description=dust chr20 . repeat_region 49302 49322 . ? . description=trf chr20 . repeat_region 49393 49436 . ? . description=trf chr20 ensembl protein_coding_gene 43229 44557 . - . ID=Thaps25570;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEG8];external_name=Thaps25570;logic_name=jgi_thaps3 chr20 ensembl transcript 43229 44557 . - . ID=Thaps25570;Parent=Thaps25570;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 43229 44052 . - 0 ID=Thaps25570;Parent=Thaps25570;rank=3 chr20 . exon 43229 44052 . - . ID=Thaps25570.3;Parent=Thaps25570;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 44154 44274 . - 0 ID=Thaps25570;Parent=Thaps25570;rank=2 chr20 . exon 44154 44274 . - . ID=Thaps25570.2;Parent=Thaps25570;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 44432 44557 . - 0 ID=Thaps25570;Parent=Thaps25570;rank=1 chr20 . exon 44432 44557 . - . ID=Thaps25570.1;Parent=Thaps25570;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 45400 47667 . + . ID=Thaps26457;biotype=protein_coding;description=Glutathione reductase%2C gro-2 [Source:UniProtKB/TrEMBL%3BAcc:B8CEG9];external_name=GR;logic_name=jgi_thaps3 chr20 ensembl transcript 45400 47667 . + . ID=Thaps26457;Parent=Thaps26457;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 45400 45449 . + 0 ID=Thaps26457;Parent=Thaps26457;rank=1 chr20 . exon 45400 45449 . + . ID=Thaps26457.1;Parent=Thaps26457;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 45501 45559 . + 0 ID=Thaps26457;Parent=Thaps26457;rank=2 chr20 . exon 45501 45559 . + . ID=Thaps26457.2;Parent=Thaps26457;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 45906 46112 . + 0 ID=Thaps26457;Parent=Thaps26457;rank=3 chr20 . exon 45906 46112 . + . ID=Thaps26457.3;Parent=Thaps26457;constitutive=1;rank=3 chr20 . CDS 46304 46437 . + 0 ID=Thaps26457;Parent=Thaps26457;rank=4 chr20 . exon 46304 46437 . + . ID=Thaps26457.4;Parent=Thaps26457;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 46525 47667 . + 0 ID=Thaps26457;Parent=Thaps26457;rank=5 chr20 . exon 46525 47667 . + . ID=Thaps26457.5;Parent=Thaps26457;constitutive=1;rank=5 chr20 ensembl protein_coding_gene 40300 40630 . - . ID=Thaps264664;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEG7];external_name=Thaps264664;logic_name=jgi_thaps3 chr20 ensembl transcript 40300 40630 . - . ID=Thaps264664;Parent=Thaps264664;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 40300 40630 . - 0 ID=Thaps264664;Parent=Thaps264664;rank=1 chr20 . exon 40300 40630 . - . ID=Thaps264664.1;Parent=Thaps264664;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . repeat_region 49572 49973 . + . description=Copia5LTR_TP chr20 ensembl protein_coding_gene 51619 52456 . + . ID=Thaps11418;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEH0];external_name=Thaps11418;logic_name=jgi_thaps3 chr20 ensembl transcript 51619 52456 . + . ID=Thaps11418;Parent=Thaps11418;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 51619 51831 . + 0 ID=Thaps11418;Parent=Thaps11418;rank=1 chr20 . exon 51619 51831 . + . ID=Thaps11418.1;Parent=Thaps11418;constitutive=1;rank=1 chr20 . CDS 51958 52155 . + 0 ID=Thaps11418;Parent=Thaps11418;rank=2 chr20 . exon 51958 52155 . + . ID=Thaps11418.2;Parent=Thaps11418;constitutive=1;rank=2 chr20 . CDS 52358 52456 . + 0 ID=Thaps11418;Parent=Thaps11418;rank=3 chr20 . exon 52358 52456 . + . ID=Thaps11418.3;Parent=Thaps11418;constitutive=1;rank=3 chr20 ensembl protein_coding_gene 56636 57472 . - . ID=Thaps11420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEH2];external_name=Thaps11420;logic_name=jgi_thaps3 chr20 ensembl transcript 56636 57472 . - . ID=Thaps11420;Parent=Thaps11420;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 56636 57472 . - 0 ID=Thaps11420;Parent=Thaps11420;rank=1 chr20 . exon 56636 57472 . - . ID=Thaps11420.1;Parent=Thaps11420;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 52643 55834 . - . ID=Thaps25572;biotype=protein_coding;description=Acetyl-coa synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CEH1];external_name=Thaps25572;logic_name=jgi_thaps3 chr20 ensembl transcript 52643 55834 . - . ID=Thaps25572;Parent=Thaps25572;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 52643 53418 . - 0 ID=Thaps25572;Parent=Thaps25572;rank=4 chr20 . exon 52643 53418 . - . ID=Thaps25572.4;Parent=Thaps25572;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 53513 54434 . - 0 ID=Thaps25572;Parent=Thaps25572;rank=3 chr20 . exon 53513 54434 . - . ID=Thaps25572.3;Parent=Thaps25572;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 54522 55457 . - 0 ID=Thaps25572;Parent=Thaps25572;rank=2 chr20 . exon 54522 55457 . - . ID=Thaps25572.2;Parent=Thaps25572;constitutive=1;rank=2 chr20 . CDS 55547 55834 . - 0 ID=Thaps25572;Parent=Thaps25572;rank=1 chr20 . exon 55547 55834 . - . ID=Thaps25572.1;Parent=Thaps25572;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 58499 62541 . + . ID=Thaps25573;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEH3];external_name=Thaps25573;logic_name=jgi_thaps3 chr20 ensembl transcript 58499 62541 . + . ID=Thaps25573;Parent=Thaps25573;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 58499 58927 . + 0 ID=Thaps25573;Parent=Thaps25573;rank=1 chr20 . exon 58499 58927 . + . ID=Thaps25573.1;Parent=Thaps25573;constitutive=1;rank=1 chr20 . CDS 59028 59504 . + 0 ID=Thaps25573;Parent=Thaps25573;rank=2 chr20 . exon 59028 59504 . + . ID=Thaps25573.2;Parent=Thaps25573;constitutive=1;rank=2 chr20 . CDS 59610 59831 . + 0 ID=Thaps25573;Parent=Thaps25573;rank=3 chr20 . CDS 59914 62328 . + 0 ID=Thaps25573;Parent=Thaps25573;rank=4 chr20 . CDS 62388 62420 . + 0 ID=Thaps25573;Parent=Thaps25573;rank=5 chr20 . CDS 62443 62541 . + 0 ID=Thaps25573;Parent=Thaps25573;rank=6 chr20 . repeat_region 63078 63090 . ? . description=dust chr20 . repeat_region 67830 67837 . ? . description=dust chr20 ensembl rRNA_gene 66915 67028 . - . ID=EPrTPOG00000000012;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr20 ensembl rRNA 66915 67028 . - . ID=EPrTPOT00000000022;Parent=EPrTPOG00000000012;biotype=rRNA;logic_name=ncrna_eg chr20 . exon 66915 67028 . - . ID=EPrTPOE00000000012;Parent=EPrTPOT00000000022;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 67356 69684 . - . ID=Thaps11424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEH6];external_name=Thaps11424;logic_name=jgi_thaps3 chr20 ensembl transcript 67356 69684 . - . ID=Thaps11424;Parent=Thaps11424;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 67356 67378 . - 0 ID=Thaps11424;Parent=Thaps11424;rank=8 chr20 . exon 67356 67378 . - . ID=Thaps11424.8;Parent=Thaps11424;constitutive=1;ensembl_end_phase=2;rank=8 chr20 . CDS 67506 67608 . - 0 ID=Thaps11424;Parent=Thaps11424;rank=7 chr20 . exon 67506 67608 . - . ID=Thaps11424.7;Parent=Thaps11424;constitutive=1;ensembl_end_phase=1;rank=7 chr20 . CDS 67683 67875 . - 0 ID=Thaps11424;Parent=Thaps11424;rank=6 chr20 . exon 67683 67875 . - . ID=Thaps11424.6;Parent=Thaps11424;constitutive=1;ensembl_end_phase=1;rank=6 chr20 . CDS 67961 68111 . - 0 ID=Thaps11424;Parent=Thaps11424;rank=5 chr20 . exon 67961 68111 . - . ID=Thaps11424.5;Parent=Thaps11424;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . CDS 68182 68326 . - 0 ID=Thaps11424;Parent=Thaps11424;rank=4 chr20 . exon 68182 68326 . - . ID=Thaps11424.4;Parent=Thaps11424;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . CDS 68471 68599 . - 0 ID=Thaps11424;Parent=Thaps11424;rank=3 chr20 . exon 68471 68599 . - . ID=Thaps11424.3;Parent=Thaps11424;constitutive=1;rank=3 chr20 . CDS 68620 68645 . - 0 ID=Thaps11424;Parent=Thaps11424;rank=2 chr20 . exon 68620 68645 . - . ID=Thaps11424.2;Parent=Thaps11424;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 68859 69684 . - 0 ID=Thaps11424;Parent=Thaps11424;rank=1 chr20 . exon 68859 69684 . - . ID=Thaps11424.1;Parent=Thaps11424;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . exon 59610 59831 . + . ID=Thaps25573.3;Parent=Thaps25573;constitutive=1;rank=3 chr20 . exon 59914 62328 . + . ID=Thaps25573.4;Parent=Thaps25573;constitutive=1;rank=4 chr20 . exon 62388 62420 . + . ID=Thaps25573.5;Parent=Thaps25573;constitutive=1;rank=5 chr20 . exon 62443 62541 . + . ID=Thaps25573.6;Parent=Thaps25573;constitutive=1;rank=6 chr20 ensembl protein_coding_gene 63123 64701 . + . ID=Thaps25574;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEH4];external_name=Thaps25574;logic_name=jgi_thaps3 chr20 ensembl transcript 63123 64701 . + . ID=Thaps25574;Parent=Thaps25574;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 63123 63467 . + 0 ID=Thaps25574;Parent=Thaps25574;rank=1 chr20 . exon 63123 63467 . + . ID=Thaps25574.1;Parent=Thaps25574;constitutive=1;rank=1 chr20 . CDS 63654 64293 . + 0 ID=Thaps25574;Parent=Thaps25574;rank=2 chr20 . exon 63654 64293 . + . ID=Thaps25574.2;Parent=Thaps25574;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 64388 64701 . + 0 ID=Thaps25574;Parent=Thaps25574;rank=3 chr20 . exon 64388 64701 . + . ID=Thaps25574.3;Parent=Thaps25574;constitutive=1;ensembl_end_phase=2;rank=3 chr20 ensembl protein_coding_gene 64798 66706 . - . ID=Thaps25575;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEH5];external_name=Thaps25575;logic_name=jgi_thaps3 chr20 ensembl transcript 64798 66706 . - . ID=Thaps25575;Parent=Thaps25575;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 64798 65266 . - 0 ID=Thaps25575;Parent=Thaps25575;rank=4 chr20 . exon 64798 65266 . - . ID=Thaps25575.4;Parent=Thaps25575;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . CDS 65311 66051 . - 0 ID=Thaps25575;Parent=Thaps25575;rank=3 chr20 . exon 65311 66051 . - . ID=Thaps25575.3;Parent=Thaps25575;constitutive=1;rank=3 chr20 . CDS 66140 66370 . - 0 ID=Thaps25575;Parent=Thaps25575;rank=2 chr20 . exon 66140 66370 . - . ID=Thaps25575.2;Parent=Thaps25575;constitutive=1;rank=2 chr20 . CDS 66546 66706 . - 0 ID=Thaps25575;Parent=Thaps25575;rank=1 chr20 . exon 66546 66706 . - . ID=Thaps25575.1;Parent=Thaps25575;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . repeat_region 70108 70143 . ? . description=trf chr20 . repeat_region 70108 70143 . ? . description=trf chr20 . repeat_region 70586 70606 . ? . description=trf chr20 . repeat_region 73467 73499 . ? . description=trf chr20 . repeat_region 74708 74752 . ? . description=trf chr20 ensembl protein_coding_gene 71266 72157 . - . ID=Thaps11425;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEH7];external_name=Thaps11425;logic_name=jgi_thaps3 chr20 ensembl transcript 71266 72157 . - . ID=Thaps11425;Parent=Thaps11425;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 71266 71638 . - 0 ID=Thaps11425;Parent=Thaps11425;rank=2 chr20 . exon 71266 71638 . - . ID=Thaps11425.2;Parent=Thaps11425;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 71832 72157 . - 0 ID=Thaps11425;Parent=Thaps11425;rank=1 chr20 . exon 71832 72157 . - . ID=Thaps11425.1;Parent=Thaps11425;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 73251 76266 . + . ID=Thaps11426;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEH8];external_name=Thaps11426;logic_name=jgi_thaps3 chr20 ensembl transcript 73251 76266 . + . ID=Thaps11426;Parent=Thaps11426;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 73251 74030 . + 0 ID=Thaps11426;Parent=Thaps11426;rank=1 chr20 . exon 73251 74030 . + . ID=Thaps11426.1;Parent=Thaps11426;constitutive=1;rank=1 chr20 . CDS 74117 74378 . + 0 ID=Thaps11426;Parent=Thaps11426;rank=2 chr20 . exon 74117 74378 . + . ID=Thaps11426.2;Parent=Thaps11426;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 74550 74598 . + 0 ID=Thaps11426;Parent=Thaps11426;rank=3 chr20 . exon 74550 74598 . + . ID=Thaps11426.3;Parent=Thaps11426;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 74652 76266 . + 0 ID=Thaps11426;Parent=Thaps11426;rank=4 chr20 . exon 74652 76266 . + . ID=Thaps11426.4;Parent=Thaps11426;constitutive=1;ensembl_end_phase=1;rank=4 chr20 ensembl protein_coding_gene 76698 78172 . - . ID=Thaps11427;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEH9];external_name=Thaps11427;logic_name=jgi_thaps3 chr20 ensembl transcript 76698 78172 . - . ID=Thaps11427;Parent=Thaps11427;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 76698 77102 . - 0 ID=Thaps11427;Parent=Thaps11427;rank=3 chr20 . exon 76698 77102 . - . ID=Thaps11427.3;Parent=Thaps11427;constitutive=1;rank=3 chr20 . CDS 77213 77625 . - 0 ID=Thaps11427;Parent=Thaps11427;rank=2 chr20 . exon 77213 77625 . - . ID=Thaps11427.2;Parent=Thaps11427;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 77725 78172 . - 0 ID=Thaps11427;Parent=Thaps11427;rank=1 chr20 . exon 77725 78172 . - . ID=Thaps11427.1;Parent=Thaps11427;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 78764 79789 . + . ID=Thaps25576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI0];external_name=Thaps25576;logic_name=jgi_thaps3 chr20 ensembl transcript 78764 79789 . + . ID=Thaps25576;Parent=Thaps25576;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 78764 79789 . + 0 ID=Thaps25576;Parent=Thaps25576;rank=1 chr20 . exon 78764 79789 . + . ID=Thaps25576.1;Parent=Thaps25576;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 86007 86480 . - . ID=Thaps11430;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI2];external_name=Thaps11430;logic_name=jgi_thaps3 chr20 ensembl transcript 86007 86480 . - . ID=Thaps11430;Parent=Thaps11430;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 86007 86480 . - 0 ID=Thaps11430;Parent=Thaps11430;rank=1 chr20 . exon 86007 86480 . - . ID=Thaps11430.1;Parent=Thaps11430;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 87159 87644 . + . ID=Thaps11431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI3];external_name=Thaps11431;logic_name=jgi_thaps3 chr20 ensembl transcript 87159 87644 . + . ID=Thaps11431;Parent=Thaps11431;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 87159 87644 . + 0 ID=Thaps11431;Parent=Thaps11431;rank=1 chr20 . exon 87159 87644 . + . ID=Thaps11431.1;Parent=Thaps11431;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 82850 85594 . + . ID=Thaps270013;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI1];external_name=Thaps270013;logic_name=jgi_thaps3 chr20 ensembl transcript 82850 85594 . + . ID=Thaps270013;Parent=Thaps270013;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 82850 83873 . + 0 ID=Thaps270013;Parent=Thaps270013;rank=1 chr20 . exon 82850 83873 . + . ID=Thaps270013.1;Parent=Thaps270013;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 84381 85594 . + 0 ID=Thaps270013;Parent=Thaps270013;rank=2 chr20 . exon 84381 85594 . + . ID=Thaps270013.2;Parent=Thaps270013;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . repeat_region 89998 90040 . ? . description=dust chr20 . repeat_region 94149 94177 . ? . description=trf chr20 ensembl protein_coding_gene 89848 90840 . + . ID=Thaps11432;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI4];external_name=Thaps11432;logic_name=jgi_thaps3 chr20 ensembl transcript 89848 90840 . + . ID=Thaps11432;Parent=Thaps11432;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 89848 90840 . + 0 ID=Thaps11432;Parent=Thaps11432;rank=1 chr20 . exon 89848 90840 . + . ID=Thaps11432.1;Parent=Thaps11432;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 90953 92350 . - . ID=Thaps11433;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI5];external_name=Thaps11433;logic_name=jgi_thaps3 chr20 ensembl transcript 90953 92350 . - . ID=Thaps11433;Parent=Thaps11433;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 90953 92350 . - 0 ID=Thaps11433;Parent=Thaps11433;rank=1 chr20 . exon 90953 92350 . - . ID=Thaps11433.1;Parent=Thaps11433;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 94186 95849 . + . ID=Thaps11434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI7];external_name=Thaps11434;logic_name=jgi_thaps3 chr20 ensembl transcript 94186 95849 . + . ID=Thaps11434;Parent=Thaps11434;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 94186 95849 . + 0 ID=Thaps11434;Parent=Thaps11434;rank=1 chr20 . exon 94186 95849 . + . ID=Thaps11434.1;Parent=Thaps11434;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 97687 97974 . + . ID=Thaps38472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI9];external_name=Thaps38472;logic_name=jgi_thaps3 chr20 ensembl transcript 97687 97974 . + . ID=Thaps38472;Parent=Thaps38472;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 97687 97974 . + 0 ID=Thaps38472;Parent=Thaps38472;rank=1 chr20 . exon 97687 97974 . + . ID=Thaps38472.1;Parent=Thaps38472;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 96967 97683 . + . ID=Thaps38475;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI8];external_name=Thaps38475;logic_name=jgi_thaps3 chr20 ensembl transcript 96967 97683 . + . ID=Thaps38475;Parent=Thaps38475;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 96967 97683 . + 0 ID=Thaps38475;Parent=Thaps38475;rank=1 chr20 . exon 96967 97683 . + . ID=Thaps38475.1;Parent=Thaps38475;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 93498 93758 . - . ID=Thaps38482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEI6];external_name=Thaps38482;logic_name=jgi_thaps3 chr20 ensembl transcript 93498 93758 . - . ID=Thaps38482;Parent=Thaps38482;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 93498 93758 . - 0 ID=Thaps38482;Parent=Thaps38482;rank=1 chr20 . exon 93498 93758 . - . ID=Thaps38482.1;Parent=Thaps38482;constitutive=1;rank=1 chr20 . biological_region 105720 105720 0.999 - . logic_name=eponine chr20 ensembl protein_coding_gene 100053 100547 . + . ID=Thaps11436;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEJ0];external_name=Thaps11436;logic_name=jgi_thaps3 chr20 ensembl transcript 100053 100547 . + . ID=Thaps11436;Parent=Thaps11436;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 100053 100547 . + 0 ID=Thaps11436;Parent=Thaps11436;rank=1 chr20 . exon 100053 100547 . + . ID=Thaps11436.1;Parent=Thaps11436;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 101030 101713 . - . ID=Thaps11437;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEJ1];external_name=Thaps11437;logic_name=jgi_thaps3 chr20 ensembl transcript 101030 101713 . - . ID=Thaps11437;Parent=Thaps11437;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 101030 101713 . - 0 ID=Thaps11437;Parent=Thaps11437;rank=1 chr20 . exon 101030 101713 . - . ID=Thaps11437.1;Parent=Thaps11437;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 101933 105454 . - . ID=Thaps11438;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEJ2];external_name=Thaps11438;logic_name=jgi_thaps3 chr20 ensembl transcript 101933 105454 . - . ID=Thaps11438;Parent=Thaps11438;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 101933 105454 . - 0 ID=Thaps11438;Parent=Thaps11438;rank=1 chr20 . exon 101933 105454 . - . ID=Thaps11438.1;Parent=Thaps11438;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 106732 108262 . - . ID=Thaps11439;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEJ3];external_name=Thaps11439;logic_name=jgi_thaps3 chr20 ensembl transcript 106732 108262 . - . ID=Thaps11439;Parent=Thaps11439;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 106732 107509 . - 0 ID=Thaps11439;Parent=Thaps11439;rank=2 chr20 . exon 106732 107509 . - . ID=Thaps11439.2;Parent=Thaps11439;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 107850 108262 . - 0 ID=Thaps11439;Parent=Thaps11439;rank=1 chr20 . exon 107850 108262 . - . ID=Thaps11439.1;Parent=Thaps11439;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . repeat_region 114962 114969 . ? . description=dust chr20 ensembl protein_coding_gene 111460 113454 . - . ID=Thaps11441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEJ5];external_name=Thaps11441;logic_name=jgi_thaps3 chr20 ensembl transcript 111460 113454 . - . ID=Thaps11441;Parent=Thaps11441;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 111460 113454 . - 0 ID=Thaps11441;Parent=Thaps11441;rank=1 chr20 . exon 111460 113454 . - . ID=Thaps11441.1;Parent=Thaps11441;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 115239 118731 . - . ID=Thaps11442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEJ6];external_name=Thaps11442;logic_name=jgi_thaps3 chr20 ensembl transcript 115239 118731 . - . ID=Thaps11442;Parent=Thaps11442;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 115239 115382 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=11 chr20 . exon 115239 115382 . - . ID=Thaps11442.11;Parent=Thaps11442;constitutive=1;rank=11 chr20 . CDS 115446 115481 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=10 chr20 . exon 115446 115481 . - . ID=Thaps11442.10;Parent=Thaps11442;constitutive=1;rank=10 chr20 . CDS 115564 115614 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=9 chr20 . exon 115564 115614 . - . ID=Thaps11442.9;Parent=Thaps11442;constitutive=1;rank=9 chr20 . CDS 115721 115756 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=8 chr20 . exon 115721 115756 . - . ID=Thaps11442.8;Parent=Thaps11442;constitutive=1;rank=8 chr20 . CDS 115854 116666 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=7 chr20 . exon 115854 116666 . - . ID=Thaps11442.7;Parent=Thaps11442;constitutive=1;rank=7 chr20 . CDS 116748 116863 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=6 chr20 . exon 116748 116863 . - . ID=Thaps11442.6;Parent=Thaps11442;constitutive=1;ensembl_end_phase=2;rank=6 chr20 . CDS 116951 116987 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=5 chr20 . exon 116951 116987 . - . ID=Thaps11442.5;Parent=Thaps11442;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . CDS 117360 117445 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=4 chr20 . exon 117360 117445 . - . ID=Thaps11442.4;Parent=Thaps11442;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 117521 117662 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=3 chr20 . exon 117521 117662 . - . ID=Thaps11442.3;Parent=Thaps11442;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 117744 118154 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=2 chr20 . exon 117744 118154 . - . ID=Thaps11442.2;Parent=Thaps11442;constitutive=1;rank=2 chr20 . CDS 118243 118731 . - 0 ID=Thaps11442;Parent=Thaps11442;rank=1 chr20 . exon 118243 118731 . - . ID=Thaps11442.1;Parent=Thaps11442;constitutive=1;rank=1 chr20 ensembl gene 109373 109893 . - . ID=Thaps264670;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr20 ensembl transcript 109373 109893 . - . ID=Thaps264670;Parent=Thaps264670;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr20 . exon 109373 109471 . - . ID=Thaps264670.3;Parent=Thaps264670;constitutive=1;rank=3 chr20 . exon 109562 109768 . - . ID=Thaps264670.2;Parent=Thaps264670;constitutive=1;rank=2 chr20 . exon 109861 109893 . - . ID=Thaps264670.1;Parent=Thaps264670;constitutive=1;rank=1 chr20 . repeat_region 121452 121478 . ? . description=trf chr20 ensembl protein_coding_gene 125111 125884 . - . ID=Thaps14322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEJ9];external_name=Thaps14322;logic_name=jgi_thaps3 chr20 ensembl transcript 125111 125884 . - . ID=Thaps14322;Parent=Thaps14322;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 125111 125884 . - 0 ID=Thaps14322;Parent=Thaps14322;rank=1 chr20 . exon 125111 125884 . - . ID=Thaps14322.1;Parent=Thaps14322;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 126538 127599 . - . ID=Thaps25582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK0];external_name=Thaps25582;logic_name=jgi_thaps3 chr20 ensembl transcript 126538 127599 . - . ID=Thaps25582;Parent=Thaps25582;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 126538 127599 . - 0 ID=Thaps25582;Parent=Thaps25582;rank=1 chr20 . exon 126538 127599 . - . ID=Thaps25582.1;Parent=Thaps25582;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 119968 121098 . + . ID=Thaps264671;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEJ7];external_name=Thaps264671;logic_name=jgi_thaps3 chr20 ensembl transcript 119968 121098 . + . ID=Thaps264671;Parent=Thaps264671;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 119968 121098 . + 0 ID=Thaps264671;Parent=Thaps264671;rank=1 chr20 . exon 119968 121098 . + . ID=Thaps264671.1;Parent=Thaps264671;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 122790 124352 . + . ID=Thaps264672;biotype=protein_coding;description=Cdc45-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEJ8];external_name=CDC45;logic_name=jgi_thaps3 chr20 ensembl transcript 122790 124352 . + . ID=Thaps264672;Parent=Thaps264672;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 122790 122984 . + 0 ID=Thaps264672;Parent=Thaps264672;rank=1 chr20 . exon 122790 122984 . + . ID=Thaps264672.1;Parent=Thaps264672;constitutive=1;rank=1 chr20 . CDS 123057 123383 . + 0 ID=Thaps264672;Parent=Thaps264672;rank=2 chr20 . exon 123057 123383 . + . ID=Thaps264672.2;Parent=Thaps264672;constitutive=1;rank=2 chr20 . CDS 123486 123703 . + 0 ID=Thaps264672;Parent=Thaps264672;rank=3 chr20 . exon 123486 123703 . + . ID=Thaps264672.3;Parent=Thaps264672;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 123935 124352 . + 0 ID=Thaps264672;Parent=Thaps264672;rank=4 chr20 . exon 123935 124352 . + . ID=Thaps264672.4;Parent=Thaps264672;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . repeat_region 129227 129235 . ? . description=dust chr20 ensembl protein_coding_gene 130642 132850 . - . ID=Thaps25583;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK1];external_name=Thaps25583;logic_name=jgi_thaps3 chr20 ensembl transcript 130642 132850 . - . ID=Thaps25583;Parent=Thaps25583;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 130642 130782 . - 0 ID=Thaps25583;Parent=Thaps25583;rank=5 chr20 . exon 130642 130782 . - . ID=Thaps25583.5;Parent=Thaps25583;constitutive=1;rank=5 chr20 . CDS 130856 131337 . - 0 ID=Thaps25583;Parent=Thaps25583;rank=4 chr20 . exon 130856 131337 . - . ID=Thaps25583.4;Parent=Thaps25583;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 131469 131634 . - 0 ID=Thaps25583;Parent=Thaps25583;rank=3 chr20 . exon 131469 131634 . - . ID=Thaps25583.3;Parent=Thaps25583;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 131730 132683 . - 0 ID=Thaps25583;Parent=Thaps25583;rank=2 chr20 . exon 131730 132683 . - . ID=Thaps25583.2;Parent=Thaps25583;constitutive=1;rank=2 chr20 . CDS 132779 132850 . - 0 ID=Thaps25583;Parent=Thaps25583;rank=1 chr20 . exon 132779 132850 . - . ID=Thaps25583.1;Parent=Thaps25583;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 135514 135847 . - . ID=Thaps264674;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK3];external_name=Thaps264674;logic_name=jgi_thaps3 chr20 ensembl transcript 135514 135847 . - . ID=Thaps264674;Parent=Thaps264674;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 135514 135847 . - 0 ID=Thaps264674;Parent=Thaps264674;rank=1 chr20 . exon 135514 135847 . - . ID=Thaps264674.1;Parent=Thaps264674;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 137804 138823 . + . ID=Thaps270017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK4];external_name=Thaps270017;logic_name=jgi_thaps3 chr20 ensembl transcript 137804 138823 . + . ID=Thaps270017;Parent=Thaps270017;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 137804 138511 . + 0 ID=Thaps270017;Parent=Thaps270017;rank=1 chr20 . exon 137804 138511 . + . ID=Thaps270017.1;Parent=Thaps270017;constitutive=1;rank=1 chr20 . CDS 138533 138823 . + 0 ID=Thaps270017;Parent=Thaps270017;rank=2 chr20 ensembl protein_coding_gene 134113 135375 . + . ID=Thaps30533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK2];external_name=Thaps30533;logic_name=jgi_thaps3 chr20 ensembl transcript 134113 135375 . + . ID=Thaps30533;Parent=Thaps30533;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 134113 135375 . + 0 ID=Thaps30533;Parent=Thaps30533;rank=1 chr20 . exon 134113 135375 . + . ID=Thaps30533.1;Parent=Thaps30533;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 145690 147264 . + . ID=Thaps11453;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK7];external_name=Thaps11453;logic_name=jgi_thaps3 chr20 ensembl transcript 145690 147264 . + . ID=Thaps11453;Parent=Thaps11453;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 145690 146813 . + 0 ID=Thaps11453;Parent=Thaps11453;rank=1 chr20 . exon 145690 146813 . + . ID=Thaps11453.1;Parent=Thaps11453;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 146896 147166 . + 0 ID=Thaps11453;Parent=Thaps11453;rank=2 chr20 . exon 146896 147166 . + . ID=Thaps11453.2;Parent=Thaps11453;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 147250 147264 . + 0 ID=Thaps11453;Parent=Thaps11453;rank=3 chr20 . exon 147250 147264 . + . ID=Thaps11453.3;Parent=Thaps11453;constitutive=1;rank=3 chr20 ensembl protein_coding_gene 147549 148684 . - . ID=Thaps11454;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK8];external_name=Thaps11454;logic_name=jgi_thaps3 chr20 ensembl transcript 147549 148684 . - . ID=Thaps11454;Parent=Thaps11454;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 147549 148038 . - 0 ID=Thaps11454;Parent=Thaps11454;rank=3 chr20 . exon 147549 148038 . - . ID=Thaps11454.3;Parent=Thaps11454;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 148131 148415 . - 0 ID=Thaps11454;Parent=Thaps11454;rank=2 chr20 . exon 148131 148415 . - . ID=Thaps11454.2;Parent=Thaps11454;constitutive=1;rank=2 chr20 . CDS 148527 148684 . - 0 ID=Thaps11454;Parent=Thaps11454;rank=1 chr20 ensembl protein_coding_gene 144353 144667 . + . ID=Thaps19289;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK6];external_name=Thaps19289;logic_name=jgi_thaps3 chr20 ensembl transcript 144353 144667 . + . ID=Thaps19289;Parent=Thaps19289;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 144353 144667 . + 0 ID=Thaps19289;Parent=Thaps19289;rank=1 chr20 . exon 144353 144667 . + . ID=Thaps19289.1;Parent=Thaps19289;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 140654 143284 . - . ID=Thaps25587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK5];external_name=Thaps25587;logic_name=jgi_thaps3 chr20 ensembl transcript 140654 143284 . - . ID=Thaps25587;Parent=Thaps25587;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 140654 143284 . - 0 ID=Thaps25587;Parent=Thaps25587;rank=1 chr20 . exon 140654 143284 . - . ID=Thaps25587.1;Parent=Thaps25587;constitutive=1;rank=1 chr20 . exon 138533 138823 . + . ID=Thaps270017.2;Parent=Thaps270017;constitutive=1;rank=2 chr20 . repeat_region 152129 152137 . ? . description=dust chr20 . repeat_region 152778 152823 . ? . description=dust chr20 . repeat_region 155553 155580 . ? . description=trf chr20 . exon 148527 148684 . - . ID=Thaps11454.1;Parent=Thaps11454;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 148974 151199 . + . ID=Thaps11455;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEK9];external_name=Thaps11455;logic_name=jgi_thaps3 chr20 ensembl transcript 148974 151199 . + . ID=Thaps11455;Parent=Thaps11455;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 148974 149094 . + 0 ID=Thaps11455;Parent=Thaps11455;rank=1 chr20 . exon 148974 149094 . + . ID=Thaps11455.1;Parent=Thaps11455;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 149260 151199 . + 0 ID=Thaps11455;Parent=Thaps11455;rank=2 chr20 . exon 149260 151199 . + . ID=Thaps11455.2;Parent=Thaps11455;constitutive=1;ensembl_end_phase=2;rank=2 chr20 ensembl protein_coding_gene 151427 152128 . - . ID=Thaps17861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL0];external_name=Thaps17861;logic_name=jgi_thaps3 chr20 ensembl transcript 151427 152128 . - . ID=Thaps17861;Parent=Thaps17861;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 151427 152128 . - 0 ID=Thaps17861;Parent=Thaps17861;rank=1 chr20 . exon 151427 152128 . - . ID=Thaps17861.1;Parent=Thaps17861;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 153599 154435 . - . ID=Thaps25590;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL1];external_name=Thaps25590;logic_name=jgi_thaps3 chr20 ensembl transcript 153599 154435 . - . ID=Thaps25590;Parent=Thaps25590;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 153599 154435 . - 0 ID=Thaps25590;Parent=Thaps25590;rank=1 chr20 . exon 153599 154435 . - . ID=Thaps25590.1;Parent=Thaps25590;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 154793 157140 . + . ID=Thaps25591;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL2];external_name=Thaps25591;logic_name=jgi_thaps3 chr20 ensembl transcript 154793 157140 . + . ID=Thaps25591;Parent=Thaps25591;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 154793 155936 . + 0 ID=Thaps25591;Parent=Thaps25591;rank=1 chr20 . exon 154793 155936 . + . ID=Thaps25591.1;Parent=Thaps25591;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 156023 156084 . + 0 ID=Thaps25591;Parent=Thaps25591;rank=2 chr20 . exon 156023 156084 . + . ID=Thaps25591.2;Parent=Thaps25591;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 156179 156574 . + 0 ID=Thaps25591;Parent=Thaps25591;rank=3 chr20 . exon 156179 156574 . + . ID=Thaps25591.3;Parent=Thaps25591;constitutive=1;rank=3 chr20 . CDS 156670 156759 . + 0 ID=Thaps25591;Parent=Thaps25591;rank=4 chr20 . exon 156670 156759 . + . ID=Thaps25591.4;Parent=Thaps25591;constitutive=1;rank=4 chr20 . CDS 156784 157140 . + 0 ID=Thaps25591;Parent=Thaps25591;rank=5 chr20 . exon 156784 157140 . + . ID=Thaps25591.5;Parent=Thaps25591;constitutive=1;rank=5 chr20 ensembl gene 157382 158553 . + . ID=Thaps264676;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr20 ensembl transcript 157382 158553 . + . ID=Thaps264676;Parent=Thaps264676;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr20 . exon 157382 157565 . + . ID=Thaps264676.1;Parent=Thaps264676;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . exon 157668 157702 . + . ID=Thaps264676.2;Parent=Thaps264676;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . exon 157784 157874 . + . ID=Thaps264676.3;Parent=Thaps264676;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . exon 157958 158075 . + . ID=Thaps264676.4;Parent=Thaps264676;constitutive=1;ensembl_end_phase=1;rank=4 chr20 ensembl protein_coding_gene 160297 162081 . - . ID=Thaps11460;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL3];external_name=Thaps11460;logic_name=jgi_thaps3 chr20 ensembl transcript 160297 162081 . - . ID=Thaps11460;Parent=Thaps11460;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 160297 160529 . - 0 ID=Thaps11460;Parent=Thaps11460;rank=4 chr20 . exon 160297 160529 . - . ID=Thaps11460.4;Parent=Thaps11460;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 160621 161201 . - 0 ID=Thaps11460;Parent=Thaps11460;rank=3 chr20 . exon 160621 161201 . - . ID=Thaps11460.3;Parent=Thaps11460;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 161315 161421 . - 0 ID=Thaps11460;Parent=Thaps11460;rank=2 chr20 . exon 161315 161421 . - . ID=Thaps11460.2;Parent=Thaps11460;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 161518 162081 . - 0 ID=Thaps11460;Parent=Thaps11460;rank=1 chr20 . exon 161518 162081 . - . ID=Thaps11460.1;Parent=Thaps11460;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 162422 164464 . + . ID=Thaps11461;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL4];external_name=Thaps11461;logic_name=jgi_thaps3 chr20 ensembl transcript 162422 164464 . + . ID=Thaps11461;Parent=Thaps11461;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 162422 164464 . + 0 ID=Thaps11461;Parent=Thaps11461;rank=1 chr20 . exon 162422 164464 . + . ID=Thaps11461.1;Parent=Thaps11461;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 164936 165586 . + . ID=Thaps11462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL5];external_name=Thaps11462;logic_name=jgi_thaps3 chr20 ensembl transcript 164936 165586 . + . ID=Thaps11462;Parent=Thaps11462;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 164936 165586 . + 0 ID=Thaps11462;Parent=Thaps11462;rank=1 chr20 . exon 164936 165586 . + . ID=Thaps11462.1;Parent=Thaps11462;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 167876 176974 . - . ID=Thaps25593;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL6];external_name=Thaps25593;logic_name=jgi_thaps3 chr20 ensembl transcript 167876 176974 . - . ID=Thaps25593;Parent=Thaps25593;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 167876 176974 . - 0 ID=Thaps25593;Parent=Thaps25593;rank=1 chr20 . exon 167876 176974 . - . ID=Thaps25593.1;Parent=Thaps25593;constitutive=1;rank=1 chr20 . exon 158184 158310 . + . ID=Thaps264676.5;Parent=Thaps264676;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . exon 158440 158553 . + . ID=Thaps264676.6;Parent=Thaps264676;constitutive=1;rank=6 chr20 . repeat_region 168693 168745 . ? . description=trf chr20 ensembl protein_coding_gene 177368 180504 . - . ID=Thaps25594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL7];external_name=Thaps25594;logic_name=jgi_thaps3 chr20 ensembl transcript 177368 180504 . - . ID=Thaps25594;Parent=Thaps25594;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 177368 178021 . - 0 ID=Thaps25594;Parent=Thaps25594;rank=7 chr20 . exon 177368 178021 . - . ID=Thaps25594.7;Parent=Thaps25594;constitutive=1;rank=7 chr20 . CDS 178110 178199 . - 0 ID=Thaps25594;Parent=Thaps25594;rank=6 chr20 . CDS 178292 178537 . - 0 ID=Thaps25594;Parent=Thaps25594;rank=5 chr20 . CDS 178657 178769 . - 0 ID=Thaps25594;Parent=Thaps25594;rank=4 chr20 . CDS 178869 178964 . - 0 ID=Thaps25594;Parent=Thaps25594;rank=3 chr20 . CDS 179058 179471 . - 0 ID=Thaps25594;Parent=Thaps25594;rank=2 chr20 . CDS 179766 180504 . - 0 ID=Thaps25594;Parent=Thaps25594;rank=1 chr20 . repeat_region 179502 179707 . + . description=Harbinger2N_TP chr20 . repeat_region 179517 179706 . ? . description=dust chr20 . repeat_region 186299 186331 . ? . description=dust chr20 ensembl protein_coding_gene 182249 182770 . - . ID=Thaps11466;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL9];external_name=Thaps11466;logic_name=jgi_thaps3 chr20 ensembl transcript 182249 182770 . - . ID=Thaps11466;Parent=Thaps11466;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 182249 182770 . - 0 ID=Thaps11466;Parent=Thaps11466;rank=1 chr20 . exon 182249 182770 . - . ID=Thaps11466.1;Parent=Thaps11466;constitutive=1;rank=1 chr20 . exon 178110 178199 . - . ID=Thaps25594.6;Parent=Thaps25594;constitutive=1;rank=6 chr20 . exon 178292 178537 . - . ID=Thaps25594.5;Parent=Thaps25594;constitutive=1;rank=5 chr20 . exon 178657 178769 . - . ID=Thaps25594.4;Parent=Thaps25594;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . exon 178869 178964 . - . ID=Thaps25594.3;Parent=Thaps25594;constitutive=1;rank=3 chr20 . exon 179058 179471 . - . ID=Thaps25594.2;Parent=Thaps25594;constitutive=1;rank=2 chr20 . exon 179766 180504 . - . ID=Thaps25594.1;Parent=Thaps25594;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 185162 186076 . - . ID=Thaps38469;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEM0];external_name=Thaps38469;logic_name=jgi_thaps3 chr20 ensembl transcript 185162 186076 . - . ID=Thaps38469;Parent=Thaps38469;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 185162 186076 . - 0 ID=Thaps38469;Parent=Thaps38469;rank=1 chr20 . exon 185162 186076 . - . ID=Thaps38469.1;Parent=Thaps38469;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 181565 182041 . + . ID=Thaps38490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEL8];external_name=Thaps38490;logic_name=jgi_thaps3 chr20 ensembl transcript 181565 182041 . + . ID=Thaps38490;Parent=Thaps38490;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 181565 182041 . + 0 ID=Thaps38490;Parent=Thaps38490;rank=1 chr20 . exon 181565 182041 . + . ID=Thaps38490.1;Parent=Thaps38490;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 186768 187889 . + . ID=Thaps832;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEM1];external_name=Thaps832;logic_name=jgi_thaps3 chr20 ensembl transcript 186768 187889 . + . ID=Thaps832;Parent=Thaps832;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 186768 187889 . + 0 ID=Thaps832;Parent=Thaps832;rank=1 chr20 . exon 186768 187889 . + . ID=Thaps832.1;Parent=Thaps832;constitutive=1;rank=1 chr20 . repeat_region 188543 188562 . ? . description=trf chr20 . repeat_region 195502 195535 . ? . description=trf chr20 ensembl rRNA_gene 196289 196402 . + . ID=EPrTPOG00000000049;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr20 ensembl rRNA 196289 196402 . + . ID=EPrTPOT00000000049;Parent=EPrTPOG00000000049;biotype=rRNA;logic_name=ncrna_eg chr20 . exon 196289 196402 . + . ID=EPrTPOE00000000049;Parent=EPrTPOT00000000049;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 197236 199293 . + . ID=Thaps25599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEM4];external_name=Thaps25599;logic_name=jgi_thaps3 chr20 ensembl transcript 197236 199293 . + . ID=Thaps25599;Parent=Thaps25599;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 197236 199293 . + 0 ID=Thaps25599;Parent=Thaps25599;rank=1 chr20 . exon 197236 199293 . + . ID=Thaps25599.1;Parent=Thaps25599;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 188702 190789 . + . ID=Thaps264678;biotype=protein_coding;description=NAD or nadp-dependent reductase [Source:UniProtKB/TrEMBL%3BAcc:B8CEM2];external_name=Thaps264678;logic_name=jgi_thaps3 chr20 ensembl transcript 188702 190789 . + . ID=Thaps264678;Parent=Thaps264678;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 188702 188848 . + 0 ID=Thaps264678;Parent=Thaps264678;rank=1 chr20 . exon 188702 188848 . + . ID=Thaps264678.1;Parent=Thaps264678;constitutive=1;rank=1 chr20 . CDS 188978 189049 . + 0 ID=Thaps264678;Parent=Thaps264678;rank=2 chr20 . exon 188978 189049 . + . ID=Thaps264678.2;Parent=Thaps264678;constitutive=1;rank=2 chr20 . CDS 189121 189128 . + 0 ID=Thaps264678;Parent=Thaps264678;rank=3 chr20 . exon 189121 189128 . + . ID=Thaps264678.3;Parent=Thaps264678;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 189145 189453 . + 0 ID=Thaps264678;Parent=Thaps264678;rank=4 chr20 . exon 189145 189453 . + . ID=Thaps264678.4;Parent=Thaps264678;constitutive=1;rank=4 chr20 . CDS 189475 190789 . + 0 ID=Thaps264678;Parent=Thaps264678;rank=5 chr20 . exon 189475 190789 . + . ID=Thaps264678.5;Parent=Thaps264678;constitutive=1;ensembl_end_phase=1;rank=5 chr20 ensembl protein_coding_gene 192638 195325 . - . ID=Thaps264679;biotype=protein_coding;description=Phosphatidylinositol phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8CEM3];external_name=Thaps264679;logic_name=jgi_thaps3 chr20 ensembl transcript 192638 195325 . - . ID=Thaps264679;Parent=Thaps264679;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 192638 192790 . - 0 ID=Thaps264679;Parent=Thaps264679;rank=8 chr20 . exon 192638 192790 . - . ID=Thaps264679.8;Parent=Thaps264679;constitutive=1;rank=8 chr20 . CDS 192898 193120 . - 0 ID=Thaps264679;Parent=Thaps264679;rank=7 chr20 . exon 192898 193120 . - . ID=Thaps264679.7;Parent=Thaps264679;constitutive=1;ensembl_end_phase=1;rank=7 chr20 . CDS 193206 193466 . - 0 ID=Thaps264679;Parent=Thaps264679;rank=6 chr20 . exon 193206 193466 . - . ID=Thaps264679.6;Parent=Thaps264679;constitutive=1;rank=6 chr20 . CDS 193542 194271 . - 0 ID=Thaps264679;Parent=Thaps264679;rank=5 chr20 . exon 193542 194271 . - . ID=Thaps264679.5;Parent=Thaps264679;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . CDS 194365 194398 . - 0 ID=Thaps264679;Parent=Thaps264679;rank=4 chr20 . exon 194365 194398 . - . ID=Thaps264679.4;Parent=Thaps264679;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . CDS 194489 194622 . - 0 ID=Thaps264679;Parent=Thaps264679;rank=3 chr20 . exon 194489 194622 . - . ID=Thaps264679.3;Parent=Thaps264679;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 194758 194881 . - 0 ID=Thaps264679;Parent=Thaps264679;rank=2 chr20 . exon 194758 194881 . - . ID=Thaps264679.2;Parent=Thaps264679;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 195182 195325 . - 0 ID=Thaps264679;Parent=Thaps264679;rank=1 chr20 . exon 195182 195325 . - . ID=Thaps264679.1;Parent=Thaps264679;constitutive=1;rank=1 chr20 . repeat_region 197625 197651 . ? . description=dust chr20 ensembl protein_coding_gene 199851 209254 . + . ID=Thaps25600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEM5];external_name=Thaps25600;logic_name=jgi_thaps3 chr20 ensembl transcript 199851 209254 . + . ID=Thaps25600;Parent=Thaps25600;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 199851 199993 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=1 chr20 . exon 199851 199993 . + . ID=Thaps25600.1;Parent=Thaps25600;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 200120 202297 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=2 chr20 . exon 200120 202297 . + . ID=Thaps25600.2;Parent=Thaps25600;constitutive=1;rank=2 chr20 . CDS 202353 202692 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=3 chr20 . exon 202353 202692 . + . ID=Thaps25600.3;Parent=Thaps25600;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 202802 203846 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=4 chr20 . exon 202802 203846 . + . ID=Thaps25600.4;Parent=Thaps25600;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . CDS 203929 205062 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=5 chr20 . exon 203929 205062 . + . ID=Thaps25600.5;Parent=Thaps25600;constitutive=1;rank=5 chr20 . CDS 205153 205835 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=6 chr20 . exon 205153 205835 . + . ID=Thaps25600.6;Parent=Thaps25600;constitutive=1;ensembl_end_phase=2;rank=6 chr20 . CDS 205952 206143 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=7 chr20 . exon 205952 206143 . + . ID=Thaps25600.7;Parent=Thaps25600;constitutive=1;rank=7 chr20 . CDS 206215 206957 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=8 chr20 . exon 206215 206957 . + . ID=Thaps25600.8;Parent=Thaps25600;constitutive=1;ensembl_end_phase=2;rank=8 chr20 . CDS 207033 207309 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=9 chr20 . exon 207033 207309 . + . ID=Thaps25600.9;Parent=Thaps25600;constitutive=1;ensembl_end_phase=1;rank=9 chr20 . CDS 207396 208050 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=10 chr20 . exon 207396 208050 . + . ID=Thaps25600.10;Parent=Thaps25600;constitutive=1;ensembl_end_phase=1;rank=10 chr20 . CDS 208100 208126 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=11 chr20 . CDS 208152 208205 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=12 chr20 . CDS 208341 208437 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=13 chr20 . CDS 208511 208599 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=14 chr20 . CDS 208657 209153 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=15 chr20 . CDS 209204 209254 . + 0 ID=Thaps25600;Parent=Thaps25600;rank=16 chr20 . repeat_region 211874 211926 . ? . description=trf chr20 ensembl protein_coding_gene 212186 214707 . + . ID=Thaps11474;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEM7];external_name=Thaps11474;logic_name=jgi_thaps3 chr20 ensembl transcript 212186 214707 . + . ID=Thaps11474;Parent=Thaps11474;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 212186 212196 . + 0 ID=Thaps11474;Parent=Thaps11474;rank=1 chr20 . exon 212186 212196 . + . ID=Thaps11474.1;Parent=Thaps11474;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 212254 214557 . + 0 ID=Thaps11474;Parent=Thaps11474;rank=2 chr20 . exon 212254 214557 . + . ID=Thaps11474.2;Parent=Thaps11474;constitutive=1;rank=2 chr20 . CDS 214701 214707 . + 0 ID=Thaps11474;Parent=Thaps11474;rank=3 chr20 . exon 214701 214707 . + . ID=Thaps11474.3;Parent=Thaps11474;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . exon 208100 208126 . + . ID=Thaps25600.11;Parent=Thaps25600;constitutive=1;rank=11 chr20 . exon 208152 208205 . + . ID=Thaps25600.12;Parent=Thaps25600;constitutive=1;rank=12 chr20 . exon 208341 208437 . + . ID=Thaps25600.13;Parent=Thaps25600;constitutive=1;ensembl_end_phase=1;rank=13 chr20 . exon 208511 208599 . + . ID=Thaps25600.14;Parent=Thaps25600;constitutive=1;ensembl_end_phase=2;rank=14 chr20 . exon 208657 209153 . + . ID=Thaps25600.15;Parent=Thaps25600;constitutive=1;ensembl_end_phase=2;rank=15 chr20 . exon 209204 209254 . + . ID=Thaps25600.16;Parent=Thaps25600;constitutive=1;rank=16 chr20 ensembl protein_coding_gene 209419 210855 . - . ID=Thaps25601;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEM6];external_name=Thaps25601;logic_name=jgi_thaps3 chr20 ensembl transcript 209419 210855 . - . ID=Thaps25601;Parent=Thaps25601;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 209419 210855 . - 0 ID=Thaps25601;Parent=Thaps25601;rank=1 chr20 . exon 209419 210855 . - . ID=Thaps25601.1;Parent=Thaps25601;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 215134 215769 . - . ID=Thaps30550;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEM8];external_name=Thaps30550;logic_name=jgi_thaps3 chr20 ensembl transcript 215134 215769 . - . ID=Thaps30550;Parent=Thaps30550;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 215134 215292 . - 0 ID=Thaps30550;Parent=Thaps30550;rank=3 chr20 . exon 215134 215292 . - . ID=Thaps30550.3;Parent=Thaps30550;constitutive=1;rank=3 chr20 . CDS 215356 215500 . - 0 ID=Thaps30550;Parent=Thaps30550;rank=2 chr20 . exon 215356 215500 . - . ID=Thaps30550.2;Parent=Thaps30550;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 215546 215769 . - 0 ID=Thaps30550;Parent=Thaps30550;rank=1 chr20 . exon 215546 215769 . - . ID=Thaps30550.1;Parent=Thaps30550;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . repeat_region 224993 225000 . ? . description=dust chr20 . repeat_region 227233 227244 . ? . description=dust chr20 ensembl protein_coding_gene 222120 225194 . + . ID=Thaps25603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEM9];external_name=Thaps25603;logic_name=jgi_thaps3 chr20 ensembl transcript 222120 225194 . + . ID=Thaps25603;Parent=Thaps25603;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 222120 224120 . + 0 ID=Thaps25603;Parent=Thaps25603;rank=1 chr20 . exon 222120 224120 . + . ID=Thaps25603.1;Parent=Thaps25603;constitutive=1;rank=1 chr20 . CDS 224477 224799 . + 0 ID=Thaps25603;Parent=Thaps25603;rank=2 chr20 . exon 224477 224799 . + . ID=Thaps25603.2;Parent=Thaps25603;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 224852 225194 . + 0 ID=Thaps25603;Parent=Thaps25603;rank=3 chr20 . exon 224852 225194 . + . ID=Thaps25603.3;Parent=Thaps25603;constitutive=1;ensembl_end_phase=1;rank=3 chr20 ensembl protein_coding_gene 225260 227095 . - . ID=Thaps25604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEN0];external_name=Thaps25604;logic_name=jgi_thaps3 chr20 ensembl transcript 225260 227095 . - . ID=Thaps25604;Parent=Thaps25604;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 225260 227095 . - 0 ID=Thaps25604;Parent=Thaps25604;rank=1 chr20 . exon 225260 227095 . - . ID=Thaps25604.1;Parent=Thaps25604;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 228202 230049 . + . ID=Thaps11478;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEN1];external_name=Thaps11478;logic_name=jgi_thaps3 chr20 ensembl transcript 228202 230049 . + . ID=Thaps11478;Parent=Thaps11478;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 228202 230049 . + 0 ID=Thaps11478;Parent=Thaps11478;rank=1 chr20 . exon 228202 230049 . + . ID=Thaps11478.1;Parent=Thaps11478;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 230202 230795 . - . ID=Thaps11479;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEN2];external_name=Thaps11479;logic_name=jgi_thaps3 chr20 ensembl transcript 230202 230795 . - . ID=Thaps11479;Parent=Thaps11479;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 230202 230795 . - 0 ID=Thaps11479;Parent=Thaps11479;rank=1 chr20 . exon 230202 230795 . - . ID=Thaps11479.1;Parent=Thaps11479;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 231048 232532 . + . ID=Thaps11480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEN3];external_name=Thaps11480;logic_name=jgi_thaps3 chr20 ensembl transcript 231048 232532 . + . ID=Thaps11480;Parent=Thaps11480;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 231048 231222 . + 0 ID=Thaps11480;Parent=Thaps11480;rank=1 chr20 . exon 231048 231222 . + . ID=Thaps11480.1;Parent=Thaps11480;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 231389 232254 . + 0 ID=Thaps11480;Parent=Thaps11480;rank=2 chr20 . exon 231389 232254 . + . ID=Thaps11480.2;Parent=Thaps11480;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 232347 232532 . + 0 ID=Thaps11480;Parent=Thaps11480;rank=3 chr20 . exon 232347 232532 . + . ID=Thaps11480.3;Parent=Thaps11480;constitutive=1;rank=3 chr20 ensembl protein_coding_gene 232931 235731 . - . ID=Thaps25605;biotype=protein_coding;description=Tryptophane synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CEN4];external_name=TRPAB;logic_name=jgi_thaps3 chr20 ensembl transcript 232931 235731 . - . ID=Thaps25605;Parent=Thaps25605;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 232931 232957 . - 0 ID=Thaps25605;Parent=Thaps25605;rank=4 chr20 . exon 232931 232957 . - . ID=Thaps25605.4;Parent=Thaps25605;constitutive=1;rank=4 chr20 . CDS 233485 234666 . - 0 ID=Thaps25605;Parent=Thaps25605;rank=3 chr20 . exon 233485 234666 . - . ID=Thaps25605.3;Parent=Thaps25605;constitutive=1;rank=3 chr20 . CDS 234706 235424 . - 0 ID=Thaps25605;Parent=Thaps25605;rank=2 chr20 . exon 234706 235424 . - . ID=Thaps25605.2;Parent=Thaps25605;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 235605 235731 . - 0 ID=Thaps25605;Parent=Thaps25605;rank=1 chr20 . exon 235605 235731 . - . ID=Thaps25605.1;Parent=Thaps25605;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 236681 237299 . - . ID=Thaps38460;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEN5];external_name=Thaps38460;logic_name=jgi_thaps3 chr20 ensembl transcript 236681 237299 . - . ID=Thaps38460;Parent=Thaps38460;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 236681 237075 . - 0 ID=Thaps38460;Parent=Thaps38460;rank=2 chr20 . exon 236681 237075 . - . ID=Thaps38460.2;Parent=Thaps38460;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 237224 237299 . - 0 ID=Thaps38460;Parent=Thaps38460;rank=1 chr20 . repeat_region 237651 237658 . ? . description=dust chr20 . repeat_region 237717 237730 . ? . description=dust chr20 . repeat_region 243538 243545 . ? . description=dust chr20 . repeat_region 244685 244713 . ? . description=trf chr20 . repeat_region 246949 246978 . ? . description=trf chr20 ensembl protein_coding_gene 239680 240210 . - . ID=Thaps11484;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEN7];external_name=Thaps11484;logic_name=jgi_thaps3 chr20 ensembl transcript 239680 240210 . - . ID=Thaps11484;Parent=Thaps11484;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 239680 240210 . - 0 ID=Thaps11484;Parent=Thaps11484;rank=1 chr20 . exon 239680 240210 . - . ID=Thaps11484.1;Parent=Thaps11484;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 243740 244867 . + . ID=Thaps11486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEN9];external_name=Thaps11486;logic_name=jgi_thaps3 chr20 ensembl transcript 243740 244867 . + . ID=Thaps11486;Parent=Thaps11486;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 243740 244867 . + 0 ID=Thaps11486;Parent=Thaps11486;rank=1 chr20 . exon 243740 244867 . + . ID=Thaps11486.1;Parent=Thaps11486;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 244982 246001 . - . ID=Thaps11487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP0];external_name=Thaps11487;logic_name=jgi_thaps3 chr20 ensembl transcript 244982 246001 . - . ID=Thaps11487;Parent=Thaps11487;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 244982 246001 . - 0 ID=Thaps11487;Parent=Thaps11487;rank=1 chr20 . exon 244982 246001 . - . ID=Thaps11487.1;Parent=Thaps11487;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 246697 248380 . + . ID=Thaps11488;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP1];external_name=Thaps11488;logic_name=jgi_thaps3 chr20 ensembl transcript 246697 248380 . + . ID=Thaps11488;Parent=Thaps11488;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 246697 246925 . + 0 ID=Thaps11488;Parent=Thaps11488;rank=1 chr20 . exon 246697 246925 . + . ID=Thaps11488.1;Parent=Thaps11488;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 246961 247763 . + 0 ID=Thaps11488;Parent=Thaps11488;rank=2 chr20 . exon 246961 247763 . + . ID=Thaps11488.2;Parent=Thaps11488;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 247849 247992 . + 0 ID=Thaps11488;Parent=Thaps11488;rank=3 chr20 . CDS 248081 248212 . + 0 ID=Thaps11488;Parent=Thaps11488;rank=4 chr20 . CDS 248243 248380 . + 0 ID=Thaps11488;Parent=Thaps11488;rank=5 chr20 ensembl protein_coding_gene 240533 242476 . - . ID=Thaps25608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEN8];external_name=Thaps25608;logic_name=jgi_thaps3 chr20 ensembl transcript 240533 242476 . - . ID=Thaps25608;Parent=Thaps25608;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 240533 242476 . - 0 ID=Thaps25608;Parent=Thaps25608;rank=1 chr20 . exon 240533 242476 . - . ID=Thaps25608.1;Parent=Thaps25608;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 238297 239391 . + . ID=Thaps270023;biotype=protein_coding;description=Nuclear distribution protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEN6];external_name=Thaps270023;logic_name=jgi_thaps3 chr20 ensembl transcript 238297 239391 . + . ID=Thaps270023;Parent=Thaps270023;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 238297 238447 . + 0 ID=Thaps270023;Parent=Thaps270023;rank=1 chr20 . exon 238297 238447 . + . ID=Thaps270023.1;Parent=Thaps270023;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 238538 239391 . + 0 ID=Thaps270023;Parent=Thaps270023;rank=2 chr20 . exon 238538 239391 . + . ID=Thaps270023.2;Parent=Thaps270023;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . exon 237224 237299 . - . ID=Thaps38460.1;Parent=Thaps38460;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . repeat_region 254913 255005 . - . description=Harbinger3_TP chr20 . exon 247849 247992 . + . ID=Thaps11488.3;Parent=Thaps11488;constitutive=1;rank=3 chr20 . exon 248081 248212 . + . ID=Thaps11488.4;Parent=Thaps11488;constitutive=1;rank=4 chr20 . exon 248243 248380 . + . ID=Thaps11488.5;Parent=Thaps11488;constitutive=1;rank=5 chr20 ensembl protein_coding_gene 248472 249686 . - . ID=Thaps11489;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP2];external_name=Thaps11489;logic_name=jgi_thaps3 chr20 ensembl transcript 248472 249686 . - . ID=Thaps11489;Parent=Thaps11489;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 248472 249686 . - 0 ID=Thaps11489;Parent=Thaps11489;rank=1 chr20 . exon 248472 249686 . - . ID=Thaps11489.1;Parent=Thaps11489;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 250018 251376 . + . ID=Thaps11490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP3];external_name=Thaps11490;logic_name=jgi_thaps3 chr20 ensembl transcript 250018 251376 . + . ID=Thaps11490;Parent=Thaps11490;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 250018 250323 . + 0 ID=Thaps11490;Parent=Thaps11490;rank=1 chr20 . exon 250018 250323 . + . ID=Thaps11490.1;Parent=Thaps11490;constitutive=1;rank=1 chr20 . CDS 250402 251376 . + 0 ID=Thaps11490;Parent=Thaps11490;rank=2 chr20 . exon 250402 251376 . + . ID=Thaps11490.2;Parent=Thaps11490;constitutive=1;rank=2 chr20 ensembl protein_coding_gene 255101 257206 . - . ID=Thaps11492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP5];external_name=Thaps11492;logic_name=jgi_thaps3 chr20 ensembl transcript 255101 257206 . - . ID=Thaps11492;Parent=Thaps11492;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 255101 257206 . - 0 ID=Thaps11492;Parent=Thaps11492;rank=1 chr20 . exon 255101 257206 . - . ID=Thaps11492.1;Parent=Thaps11492;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 252291 254166 . - . ID=Thaps38513;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP4];external_name=Thaps38513;logic_name=jgi_thaps3 chr20 ensembl transcript 252291 254166 . - . ID=Thaps38513;Parent=Thaps38513;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 252291 252523 . - 0 ID=Thaps38513;Parent=Thaps38513;rank=5 chr20 . exon 252291 252523 . - . ID=Thaps38513.5;Parent=Thaps38513;constitutive=1;ensembl_end_phase=2;rank=5 chr20 . CDS 252683 252871 . - 0 ID=Thaps38513;Parent=Thaps38513;rank=4 chr20 . exon 252683 252871 . - . ID=Thaps38513.4;Parent=Thaps38513;constitutive=1;rank=4 chr20 . CDS 252954 252995 . - 0 ID=Thaps38513;Parent=Thaps38513;rank=3 chr20 . exon 252954 252995 . - . ID=Thaps38513.3;Parent=Thaps38513;constitutive=1;rank=3 chr20 . CDS 253105 253783 . - 0 ID=Thaps38513;Parent=Thaps38513;rank=2 chr20 . exon 253105 253783 . - . ID=Thaps38513.2;Parent=Thaps38513;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 253915 254166 . - 0 ID=Thaps38513;Parent=Thaps38513;rank=1 chr20 . exon 253915 254166 . - . ID=Thaps38513.1;Parent=Thaps38513;constitutive=1;rank=1 chr20 . repeat_region 257110 257168 . ? . description=dust chr20 . repeat_region 263033 263070 . ? . description=trf chr20 ensembl protein_coding_gene 263390 264531 . + . ID=Thaps16947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP7];external_name=Thaps16947;logic_name=jgi_thaps3 chr20 ensembl transcript 263390 264531 . + . ID=Thaps16947;Parent=Thaps16947;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 263390 263981 . + 0 ID=Thaps16947;Parent=Thaps16947;rank=1 chr20 . exon 263390 263981 . + . ID=Thaps16947.1;Parent=Thaps16947;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 264099 264311 . + 0 ID=Thaps16947;Parent=Thaps16947;rank=2 chr20 . exon 264099 264311 . + . ID=Thaps16947.2;Parent=Thaps16947;constitutive=1;rank=2 chr20 . CDS 264401 264531 . + 0 ID=Thaps16947;Parent=Thaps16947;rank=3 chr20 . exon 264401 264531 . + . ID=Thaps16947.3;Parent=Thaps16947;constitutive=1;ensembl_end_phase=2;rank=3 chr20 ensembl protein_coding_gene 257672 258919 . + . ID=Thaps25610;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP6];external_name=Thaps25610;logic_name=jgi_thaps3 chr20 ensembl transcript 257672 258919 . + . ID=Thaps25610;Parent=Thaps25610;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 257672 257864 . + 0 ID=Thaps25610;Parent=Thaps25610;rank=1 chr20 . exon 257672 257864 . + . ID=Thaps25610.1;Parent=Thaps25610;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 257979 258416 . + 0 ID=Thaps25610;Parent=Thaps25610;rank=2 chr20 . exon 257979 258416 . + . ID=Thaps25610.2;Parent=Thaps25610;constitutive=1;rank=2 chr20 . CDS 258531 258919 . + 0 ID=Thaps25610;Parent=Thaps25610;rank=3 chr20 . exon 258531 258919 . + . ID=Thaps25610.3;Parent=Thaps25610;constitutive=1;ensembl_end_phase=2;rank=3 chr20 ensembl protein_coding_gene 265329 279290 . - . ID=Thaps25613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP8];external_name=Thaps25613;logic_name=jgi_thaps3 chr20 ensembl transcript 265329 279290 . - . ID=Thaps25613;Parent=Thaps25613;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 265329 265774 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=5 chr20 . exon 265329 265774 . - . ID=Thaps25613.5;Parent=Thaps25613;constitutive=1;ensembl_end_phase=2;rank=5 chr20 . CDS 265851 267839 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=4 chr20 . exon 265851 267839 . - . ID=Thaps25613.4;Parent=Thaps25613;constitutive=1;rank=4 chr20 . CDS 267922 273027 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=3 chr20 . CDS 273107 274221 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=2 chr20 . CDS 274312 279290 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=1 chr20 . exon 267922 273027 . - . ID=Thaps25613.3;Parent=Thaps25613;constitutive=1;rank=3 chr20 . exon 273107 274221 . - . ID=Thaps25613.2;Parent=Thaps25613;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . exon 274312 279290 . - . ID=Thaps25613.1;Parent=Thaps25613;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . repeat_region 278032 278054 . ? . description=trf chr20 . repeat_region 278032 278054 . ? . description=dust chr20 . repeat_region 281497 281562 . ? . description=trf chr20 ensembl protein_coding_gene 283264 285833 . - . ID=Thaps11498;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ0];external_name=Thaps11498;logic_name=jgi_thaps3 chr20 ensembl transcript 283264 285833 . - . ID=Thaps11498;Parent=Thaps11498;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 283264 284697 . - 0 ID=Thaps11498;Parent=Thaps11498;rank=3 chr20 . exon 283264 284697 . - . ID=Thaps11498.3;Parent=Thaps11498;constitutive=1;rank=3 chr20 . CDS 284794 285010 . - 0 ID=Thaps11498;Parent=Thaps11498;rank=2 chr20 . exon 284794 285010 . - . ID=Thaps11498.2;Parent=Thaps11498;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 285112 285833 . - 0 ID=Thaps11498;Parent=Thaps11498;rank=1 chr20 . exon 285112 285833 . - . ID=Thaps11498.1;Parent=Thaps11498;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 265329 279290 . - . ID=Thaps25613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP8];external_name=Thaps25613;logic_name=jgi_thaps3 chr20 ensembl transcript 265329 279290 . - . ID=Thaps25613;Parent=Thaps25613;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 265329 265774 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=5 chr20 . CDS 265851 267839 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=4 chr20 . CDS 267922 273027 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=3 chr20 . CDS 273107 274221 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=2 chr20 . CDS 274312 279290 . - 0 ID=Thaps25613;Parent=Thaps25613;rank=1 chr20 ensembl protein_coding_gene 279858 281060 . - . ID=Thaps270027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEP9];external_name=Thaps270027;logic_name=jgi_thaps3 chr20 ensembl transcript 279858 281060 . - . ID=Thaps270027;Parent=Thaps270027;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 279858 280268 . - 0 ID=Thaps270027;Parent=Thaps270027;rank=3 chr20 . exon 279858 280268 . - . ID=Thaps270027.3;Parent=Thaps270027;constitutive=1;rank=3 chr20 . CDS 280326 280411 . - 0 ID=Thaps270027;Parent=Thaps270027;rank=2 chr20 . exon 280326 280411 . - . ID=Thaps270027.2;Parent=Thaps270027;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 280466 281060 . - 0 ID=Thaps270027;Parent=Thaps270027;rank=1 chr20 . exon 280466 281060 . - . ID=Thaps270027.1;Parent=Thaps270027;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . repeat_region 294221 294685 . - . description=Harbinger3_TP chr20 . repeat_region 294687 294980 . - . description=Harbinger3_TP chr20 . repeat_region 294998 295750 . - . description=Harbinger3_TP chr20 . repeat_region 295748 296815 . - . description=Harbinger3_TP chr20 ensembl protein_coding_gene 287070 287774 . - . ID=Thaps11499;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ1];external_name=Thaps11499;logic_name=jgi_thaps3 chr20 ensembl transcript 287070 287774 . - . ID=Thaps11499;Parent=Thaps11499;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 287070 287774 . - 0 ID=Thaps11499;Parent=Thaps11499;rank=1 chr20 . exon 287070 287774 . - . ID=Thaps11499.1;Parent=Thaps11499;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 288282 289366 . + . ID=Thaps11500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ2];external_name=Thaps11500;logic_name=jgi_thaps3 chr20 ensembl transcript 288282 289366 . + . ID=Thaps11500;Parent=Thaps11500;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 288282 288645 . + 0 ID=Thaps11500;Parent=Thaps11500;rank=1 chr20 . exon 288282 288645 . + . ID=Thaps11500.1;Parent=Thaps11500;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 288795 289366 . + 0 ID=Thaps11500;Parent=Thaps11500;rank=2 chr20 . exon 288795 289366 . + . ID=Thaps11500.2;Parent=Thaps11500;constitutive=1;ensembl_end_phase=2;rank=2 chr20 ensembl protein_coding_gene 291535 292538 . + . ID=Thaps11501;biotype=protein_coding;description=Pt17531-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ3];external_name=FCP3;logic_name=jgi_thaps3 chr20 ensembl transcript 291535 292538 . + . ID=Thaps11501;Parent=Thaps11501;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 291535 291572 . + 0 ID=Thaps11501;Parent=Thaps11501;rank=1 chr20 . exon 291535 291572 . + . ID=Thaps11501.1;Parent=Thaps11501;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 291881 292206 . + 0 ID=Thaps11501;Parent=Thaps11501;rank=2 chr20 . exon 291881 292206 . + . ID=Thaps11501.2;Parent=Thaps11501;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 292312 292538 . + 0 ID=Thaps11501;Parent=Thaps11501;rank=3 chr20 . exon 292312 292538 . + . ID=Thaps11501.3;Parent=Thaps11501;constitutive=1;ensembl_end_phase=2;rank=3 chr20 ensembl gene 293152 293637 . - . ID=Thaps264688;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr20 ensembl transcript 293152 293637 . - . ID=Thaps264688;Parent=Thaps264688;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr20 . exon 293152 293637 . - . ID=Thaps264688.1;Parent=Thaps264688;constitutive=1;rank=1 chr20 . repeat_region 296395 296435 . ? . description=trf chr20 . repeat_region 296439 296509 . ? . description=trf chr20 . repeat_region 296589 296597 . ? . description=dust chr20 . repeat_region 298262 298413 . - . description=Copia1LTR_TP chr20 . repeat_region 298681 298720 . ? . description=trf chr20 . repeat_region 299169 299290 . + . description=TE1A_TP chr20 . repeat_region 299288 299428 . + . description=TE1A_TP chr20 . repeat_region 305299 305307 . ? . description=dust chr20 ensembl protein_coding_gene 296898 297893 . + . ID=Thaps11503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ4];external_name=Thaps11503;logic_name=jgi_thaps3 chr20 ensembl transcript 296898 297893 . + . ID=Thaps11503;Parent=Thaps11503;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 296898 297893 . + 0 ID=Thaps11503;Parent=Thaps11503;rank=1 chr20 . exon 296898 297893 . + . ID=Thaps11503.1;Parent=Thaps11503;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 298610 299038 . + . ID=Thaps11504;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ5];external_name=Thaps11504;logic_name=jgi_thaps3 chr20 ensembl transcript 298610 299038 . + . ID=Thaps11504;Parent=Thaps11504;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 298610 299038 . + 0 ID=Thaps11504;Parent=Thaps11504;rank=1 chr20 . exon 298610 299038 . + . ID=Thaps11504.1;Parent=Thaps11504;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 299774 300172 . + . ID=Thaps11505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ6];external_name=Thaps11505;logic_name=jgi_thaps3 chr20 ensembl transcript 299774 300172 . + . ID=Thaps11505;Parent=Thaps11505;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 299774 300172 . + 0 ID=Thaps11505;Parent=Thaps11505;rank=1 chr20 . exon 299774 300172 . + . ID=Thaps11505.1;Parent=Thaps11505;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 301292 302227 . - . ID=Thaps15398;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ7];external_name=Thaps15398;logic_name=jgi_thaps3 chr20 ensembl transcript 301292 302227 . - . ID=Thaps15398;Parent=Thaps15398;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 301292 302227 . - 0 ID=Thaps15398;Parent=Thaps15398;rank=1 chr20 . exon 301292 302227 . - . ID=Thaps15398.1;Parent=Thaps15398;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 303509 306914 . + . ID=Thaps264690;biotype=protein_coding;description=Lipoate protein ligase [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ8];external_name=LIPB_1;logic_name=jgi_thaps3 chr20 ensembl transcript 303509 306914 . + . ID=Thaps264690;Parent=Thaps264690;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 303509 304454 . + 0 ID=Thaps264690;Parent=Thaps264690;rank=1 chr20 . exon 303509 304454 . + . ID=Thaps264690.1;Parent=Thaps264690;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 304963 305076 . + 0 ID=Thaps264690;Parent=Thaps264690;rank=2 chr20 . exon 304963 305076 . + . ID=Thaps264690.2;Parent=Thaps264690;constitutive=1;rank=2 chr20 . CDS 305625 305838 . + 0 ID=Thaps264690;Parent=Thaps264690;rank=3 chr20 . exon 305625 305838 . + . ID=Thaps264690.3;Parent=Thaps264690;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 305949 306029 . + 0 ID=Thaps264690;Parent=Thaps264690;rank=4 chr20 . exon 305949 306029 . + . ID=Thaps264690.4;Parent=Thaps264690;constitutive=1;rank=4 chr20 . CDS 306096 306265 . + 0 ID=Thaps264690;Parent=Thaps264690;rank=5 chr20 . exon 306096 306265 . + . ID=Thaps264690.5;Parent=Thaps264690;constitutive=1;ensembl_end_phase=2;rank=5 chr20 . CDS 306431 306914 . + 0 ID=Thaps264690;Parent=Thaps264690;rank=6 chr20 ensembl protein_coding_gene 307173 308233 . + . ID=Thaps11508;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEQ9];external_name=Thaps11508;logic_name=jgi_thaps3 chr20 ensembl transcript 307173 308233 . + . ID=Thaps11508;Parent=Thaps11508;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 307173 307733 . + 0 ID=Thaps11508;Parent=Thaps11508;rank=1 chr20 . exon 307173 307733 . + . ID=Thaps11508.1;Parent=Thaps11508;constitutive=1;rank=1 chr20 . CDS 307878 307960 . + 0 ID=Thaps11508;Parent=Thaps11508;rank=2 chr20 . exon 307878 307960 . + . ID=Thaps11508.2;Parent=Thaps11508;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 308098 308233 . + 0 ID=Thaps11508;Parent=Thaps11508;rank=3 chr20 . exon 308098 308233 . + . ID=Thaps11508.3;Parent=Thaps11508;constitutive=1;ensembl_end_phase=1;rank=3 chr20 ensembl protein_coding_gene 309887 312395 . - . ID=Thaps11510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER1];external_name=Thaps11510;logic_name=jgi_thaps3 chr20 ensembl transcript 309887 312395 . - . ID=Thaps11510;Parent=Thaps11510;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 309887 310477 . - 0 ID=Thaps11510;Parent=Thaps11510;rank=6 chr20 . exon 309887 310477 . - . ID=Thaps11510.6;Parent=Thaps11510;constitutive=1;rank=6 chr20 . CDS 310595 311047 . - 0 ID=Thaps11510;Parent=Thaps11510;rank=5 chr20 . exon 310595 311047 . - . ID=Thaps11510.5;Parent=Thaps11510;constitutive=1;rank=5 chr20 . CDS 311134 311224 . - 0 ID=Thaps11510;Parent=Thaps11510;rank=4 chr20 . exon 311134 311224 . - . ID=Thaps11510.4;Parent=Thaps11510;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . CDS 311313 311331 . - 0 ID=Thaps11510;Parent=Thaps11510;rank=3 chr20 . exon 311313 311331 . - . ID=Thaps11510.3;Parent=Thaps11510;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 311449 311613 . - 0 ID=Thaps11510;Parent=Thaps11510;rank=2 chr20 . exon 311449 311613 . - . ID=Thaps11510.2;Parent=Thaps11510;constitutive=1;rank=2 chr20 . CDS 311717 312395 . - 0 ID=Thaps11510;Parent=Thaps11510;rank=1 chr20 . exon 311717 312395 . - . ID=Thaps11510.1;Parent=Thaps11510;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . exon 306431 306914 . + . ID=Thaps264690.6;Parent=Thaps264690;constitutive=1;ensembl_end_phase=1;rank=6 chr20 ensembl protein_coding_gene 308486 309061 . - . ID=Thaps264691;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER0];external_name=Thaps264691;logic_name=jgi_thaps3 chr20 ensembl transcript 308486 309061 . - . ID=Thaps264691;Parent=Thaps264691;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 308486 308861 . - 0 ID=Thaps264691;Parent=Thaps264691;rank=2 chr20 . exon 308486 308861 . - . ID=Thaps264691.2;Parent=Thaps264691;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 308898 309061 . - 0 ID=Thaps264691;Parent=Thaps264691;rank=1 chr20 . exon 308898 309061 . - . ID=Thaps264691.1;Parent=Thaps264691;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 312928 315672 . - . ID=Thaps270029;biotype=protein_coding;description=Cullin family-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER2];external_name=CUL1;logic_name=jgi_thaps3 chr20 ensembl transcript 312928 315672 . - . ID=Thaps270029;Parent=Thaps270029;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 312928 313163 . - 0 ID=Thaps270029;Parent=Thaps270029;rank=8 chr20 . exon 312928 313163 . - . ID=Thaps270029.8;Parent=Thaps270029;constitutive=1;ensembl_end_phase=2;rank=8 chr20 . CDS 313224 313758 . - 0 ID=Thaps270029;Parent=Thaps270029;rank=7 chr20 . exon 313224 313758 . - . ID=Thaps270029.7;Parent=Thaps270029;constitutive=1;ensembl_end_phase=1;rank=7 chr20 . CDS 313798 314449 . - 0 ID=Thaps270029;Parent=Thaps270029;rank=6 chr20 . exon 313798 314449 . - . ID=Thaps270029.6;Parent=Thaps270029;constitutive=1;ensembl_end_phase=1;rank=6 chr20 . CDS 314543 314711 . - 0 ID=Thaps270029;Parent=Thaps270029;rank=5 chr20 . exon 314543 314711 . - . ID=Thaps270029.5;Parent=Thaps270029;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . CDS 314811 314927 . - 0 ID=Thaps270029;Parent=Thaps270029;rank=4 chr20 . exon 314811 314927 . - . ID=Thaps270029.4;Parent=Thaps270029;constitutive=1;rank=4 chr20 . CDS 314952 315093 . - 0 ID=Thaps270029;Parent=Thaps270029;rank=3 chr20 . exon 314952 315093 . - . ID=Thaps270029.3;Parent=Thaps270029;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 315199 315369 . - 0 ID=Thaps270029;Parent=Thaps270029;rank=2 chr20 . exon 315199 315369 . - . ID=Thaps270029.2;Parent=Thaps270029;constitutive=1;rank=2 chr20 . CDS 315466 315672 . - 0 ID=Thaps270029;Parent=Thaps270029;rank=1 chr20 . exon 315466 315672 . - . ID=Thaps270029.1;Parent=Thaps270029;constitutive=1;rank=1 chr20 . repeat_region 322863 322880 . ? . description=dust chr20 . repeat_region 323118 323138 . ? . description=trf chr20 . repeat_region 323118 323138 . ? . description=dust chr20 ensembl protein_coding_gene 316414 322179 . - . ID=Thaps25617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER3];external_name=Thaps25617;logic_name=jgi_thaps3 chr20 ensembl transcript 316414 322179 . - . ID=Thaps25617;Parent=Thaps25617;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 316414 318114 . - 0 ID=Thaps25617;Parent=Thaps25617;rank=6 chr20 . exon 316414 318114 . - . ID=Thaps25617.6;Parent=Thaps25617;constitutive=1;rank=6 chr20 . CDS 318190 318959 . - 0 ID=Thaps25617;Parent=Thaps25617;rank=5 chr20 . exon 318190 318959 . - . ID=Thaps25617.5;Parent=Thaps25617;constitutive=1;ensembl_end_phase=2;rank=5 chr20 . CDS 319037 319266 . - 0 ID=Thaps25617;Parent=Thaps25617;rank=4 chr20 . exon 319037 319266 . - . ID=Thaps25617.4;Parent=Thaps25617;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 319344 319476 . - 0 ID=Thaps25617;Parent=Thaps25617;rank=3 chr20 . exon 319344 319476 . - . ID=Thaps25617.3;Parent=Thaps25617;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 319548 321786 . - 0 ID=Thaps25617;Parent=Thaps25617;rank=2 chr20 . exon 319548 321786 . - . ID=Thaps25617.2;Parent=Thaps25617;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 321823 322179 . - 0 ID=Thaps25617;Parent=Thaps25617;rank=1 chr20 . exon 321823 322179 . - . ID=Thaps25617.1;Parent=Thaps25617;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 322901 325537 . + . ID=Thaps25618;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER4];external_name=Thaps25618;logic_name=jgi_thaps3 chr20 ensembl transcript 322901 325537 . + . ID=Thaps25618;Parent=Thaps25618;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 322901 323492 . + 0 ID=Thaps25618;Parent=Thaps25618;rank=1 chr20 . exon 322901 323492 . + . ID=Thaps25618.1;Parent=Thaps25618;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 323606 324609 . + 0 ID=Thaps25618;Parent=Thaps25618;rank=2 chr20 . exon 323606 324609 . + . ID=Thaps25618.2;Parent=Thaps25618;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 324704 325537 . + 0 ID=Thaps25618;Parent=Thaps25618;rank=3 chr20 . exon 324704 325537 . + . ID=Thaps25618.3;Parent=Thaps25618;constitutive=1;rank=3 chr20 ensembl protein_coding_gene 326151 328658 . + . ID=Thaps11514;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER5];external_name=Thaps11514;logic_name=jgi_thaps3 chr20 ensembl transcript 326151 328658 . + . ID=Thaps11514;Parent=Thaps11514;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 326151 326826 . + 0 ID=Thaps11514;Parent=Thaps11514;rank=1 chr20 . exon 326151 326826 . + . ID=Thaps11514.1;Parent=Thaps11514;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 327100 327230 . + 0 ID=Thaps11514;Parent=Thaps11514;rank=2 chr20 . exon 327100 327230 . + . ID=Thaps11514.2;Parent=Thaps11514;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 327254 327409 . + 0 ID=Thaps11514;Parent=Thaps11514;rank=3 chr20 . exon 327254 327409 . + . ID=Thaps11514.3;Parent=Thaps11514;constitutive=1;rank=3 chr20 . CDS 327496 327948 . + 0 ID=Thaps11514;Parent=Thaps11514;rank=4 chr20 . exon 327496 327948 . + . ID=Thaps11514.4;Parent=Thaps11514;constitutive=1;rank=4 chr20 . CDS 328068 328658 . + 0 ID=Thaps11514;Parent=Thaps11514;rank=5 chr20 . exon 328068 328658 . + . ID=Thaps11514.5;Parent=Thaps11514;constitutive=1;rank=5 chr20 ensembl protein_coding_gene 329174 330337 . + . ID=Thaps11515;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER6];external_name=Thaps11515;logic_name=jgi_thaps3 chr20 ensembl transcript 329174 330337 . + . ID=Thaps11515;Parent=Thaps11515;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 329174 329487 . + 0 ID=Thaps11515;Parent=Thaps11515;rank=1 chr20 . exon 329174 329487 . + . ID=Thaps11515.1;Parent=Thaps11515;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 329623 330337 . + 0 ID=Thaps11515;Parent=Thaps11515;rank=2 chr20 . exon 329623 330337 . + . ID=Thaps11515.2;Parent=Thaps11515;constitutive=1;ensembl_end_phase=1;rank=2 chr20 ensembl protein_coding_gene 330565 332047 . - . ID=Thaps11516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER7];external_name=Thaps11516;logic_name=jgi_thaps3 chr20 ensembl transcript 330565 332047 . - . ID=Thaps11516;Parent=Thaps11516;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 330565 331217 . - 0 ID=Thaps11516;Parent=Thaps11516;rank=2 chr20 . exon 330565 331217 . - . ID=Thaps11516.2;Parent=Thaps11516;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 331345 332047 . - 0 ID=Thaps11516;Parent=Thaps11516;rank=1 chr20 . exon 331345 332047 . - . ID=Thaps11516.1;Parent=Thaps11516;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 332328 335974 . + . ID=Thaps25619;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER8];external_name=Thaps25619;logic_name=jgi_thaps3 chr20 ensembl transcript 332328 335974 . + . ID=Thaps25619;Parent=Thaps25619;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 332328 333953 . + 0 ID=Thaps25619;Parent=Thaps25619;rank=1 chr20 . exon 332328 333953 . + . ID=Thaps25619.1;Parent=Thaps25619;constitutive=1;rank=1 chr20 . CDS 333978 334788 . + 0 ID=Thaps25619;Parent=Thaps25619;rank=2 chr20 . exon 333978 334788 . + . ID=Thaps25619.2;Parent=Thaps25619;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 334968 335239 . + 0 ID=Thaps25619;Parent=Thaps25619;rank=3 chr20 . exon 334968 335239 . + . ID=Thaps25619.3;Parent=Thaps25619;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 335321 335617 . + 0 ID=Thaps25619;Parent=Thaps25619;rank=4 chr20 . exon 335321 335617 . + . ID=Thaps25619.4;Parent=Thaps25619;constitutive=1;rank=4 chr20 . CDS 335701 335757 . + 0 ID=Thaps25619;Parent=Thaps25619;rank=5 chr20 . exon 335701 335757 . + . ID=Thaps25619.5;Parent=Thaps25619;constitutive=1;rank=5 chr20 . CDS 335852 335974 . + 0 ID=Thaps25619;Parent=Thaps25619;rank=6 chr20 . exon 335852 335974 . + . ID=Thaps25619.6;Parent=Thaps25619;constitutive=1;rank=6 chr20 . repeat_region 341434 341453 . ? . description=trf chr20 . repeat_region 342447 342492 . ? . description=dust chr20 . repeat_region 342469 342492 . ? . description=trf chr20 ensembl protein_coding_gene 336667 339481 . + . ID=Thaps25620;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CER9];external_name=Thaps25620;logic_name=jgi_thaps3 chr20 ensembl transcript 336667 339481 . + . ID=Thaps25620;Parent=Thaps25620;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 336667 339309 . + 0 ID=Thaps25620;Parent=Thaps25620;rank=1 chr20 . exon 336667 339309 . + . ID=Thaps25620.1;Parent=Thaps25620;constitutive=1;rank=1 chr20 . CDS 339353 339481 . + 0 ID=Thaps25620;Parent=Thaps25620;rank=2 chr20 . exon 339353 339481 . + . ID=Thaps25620.2;Parent=Thaps25620;constitutive=1;rank=2 chr20 ensembl protein_coding_gene 340009 340875 . - . ID=Thaps25621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES0];external_name=Thaps25621;logic_name=jgi_thaps3 chr20 ensembl transcript 340009 340875 . - . ID=Thaps25621;Parent=Thaps25621;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 340009 340875 . - 0 ID=Thaps25621;Parent=Thaps25621;rank=1 chr20 . exon 340009 340875 . - . ID=Thaps25621.1;Parent=Thaps25621;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 341639 345098 . + . ID=Thaps25622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES1];external_name=Thaps25622;logic_name=jgi_thaps3 chr20 ensembl transcript 341639 345098 . + . ID=Thaps25622;Parent=Thaps25622;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 341639 344260 . + 0 ID=Thaps25622;Parent=Thaps25622;rank=1 chr20 . exon 341639 344260 . + . ID=Thaps25622.1;Parent=Thaps25622;constitutive=1;rank=1 chr20 . CDS 344344 344817 . + 0 ID=Thaps25622;Parent=Thaps25622;rank=2 chr20 . exon 344344 344817 . + . ID=Thaps25622.2;Parent=Thaps25622;constitutive=1;rank=2 chr20 . CDS 344886 345098 . + 0 ID=Thaps25622;Parent=Thaps25622;rank=3 chr20 . exon 344886 345098 . + . ID=Thaps25622.3;Parent=Thaps25622;constitutive=1;rank=3 chr20 ensembl protein_coding_gene 345179 345748 . - . ID=Thaps25623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES2];external_name=Thaps25623;logic_name=jgi_thaps3 chr20 ensembl transcript 345179 345748 . - . ID=Thaps25623;Parent=Thaps25623;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 345179 345748 . - 0 ID=Thaps25623;Parent=Thaps25623;rank=1 chr20 . exon 345179 345748 . - . ID=Thaps25623.1;Parent=Thaps25623;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 346205 347080 . + . ID=Thaps11522;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES3];external_name=Thaps11522;logic_name=jgi_thaps3 chr20 ensembl transcript 346205 347080 . + . ID=Thaps11522;Parent=Thaps11522;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 346205 347080 . + 0 ID=Thaps11522;Parent=Thaps11522;rank=1 chr20 . exon 346205 347080 . + . ID=Thaps11522.1;Parent=Thaps11522;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 347424 349164 . + . ID=Thaps11523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES4];external_name=Thaps11523;logic_name=jgi_thaps3 chr20 ensembl transcript 347424 349164 . + . ID=Thaps11523;Parent=Thaps11523;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 347424 347535 . + 0 ID=Thaps11523;Parent=Thaps11523;rank=1 chr20 . exon 347424 347535 . + . ID=Thaps11523.1;Parent=Thaps11523;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 347651 348076 . + 0 ID=Thaps11523;Parent=Thaps11523;rank=2 chr20 . exon 347651 348076 . + . ID=Thaps11523.2;Parent=Thaps11523;constitutive=1;rank=2 chr20 . CDS 348176 348606 . + 0 ID=Thaps11523;Parent=Thaps11523;rank=3 chr20 . exon 348176 348606 . + . ID=Thaps11523.3;Parent=Thaps11523;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 348679 349164 . + 0 ID=Thaps11523;Parent=Thaps11523;rank=4 chr20 . exon 348679 349164 . + . ID=Thaps11523.4;Parent=Thaps11523;constitutive=1;rank=4 chr20 ensembl protein_coding_gene 349331 349984 . - . ID=Thaps17966;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES5];external_name=Thaps17966;logic_name=jgi_thaps3 chr20 ensembl transcript 349331 349984 . - . ID=Thaps17966;Parent=Thaps17966;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 349331 349445 . - 0 ID=Thaps17966;Parent=Thaps17966;rank=3 chr20 . exon 349331 349445 . - . ID=Thaps17966.3;Parent=Thaps17966;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 349515 349773 . - 0 ID=Thaps17966;Parent=Thaps17966;rank=2 chr20 . exon 349515 349773 . - . ID=Thaps17966.2;Parent=Thaps17966;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 349849 349984 . - 0 ID=Thaps17966;Parent=Thaps17966;rank=1 chr20 . exon 349849 349984 . - . ID=Thaps17966.1;Parent=Thaps17966;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 351024 352430 . - . ID=Thaps270030;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES6];external_name=Thaps270030;logic_name=jgi_thaps3 chr20 ensembl transcript 351024 352430 . - . ID=Thaps270030;Parent=Thaps270030;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 351024 351144 . - 0 ID=Thaps270030;Parent=Thaps270030;rank=4 chr20 . exon 351024 351144 . - . ID=Thaps270030.4;Parent=Thaps270030;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . CDS 351166 351411 . - 0 ID=Thaps270030;Parent=Thaps270030;rank=3 chr20 . exon 351166 351411 . - . ID=Thaps270030.3;Parent=Thaps270030;constitutive=1;rank=3 chr20 . CDS 351499 352055 . - 0 ID=Thaps270030;Parent=Thaps270030;rank=2 chr20 . exon 351499 352055 . - . ID=Thaps270030.2;Parent=Thaps270030;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 352074 352430 . - 0 ID=Thaps270030;Parent=Thaps270030;rank=1 chr20 . exon 352074 352430 . - . ID=Thaps270030.1;Parent=Thaps270030;constitutive=1;rank=1 chr20 . repeat_region 356308 356317 . ? . description=dust chr20 . repeat_region 361435 361496 . ? . description=dust chr20 . repeat_region 361436 361484 . ? . description=trf chr20 . repeat_region 361438 361486 . ? . description=trf chr20 . repeat_region 361438 361486 . ? . description=trf chr20 . repeat_region 361476 361508 . ? . description=trf chr20 ensembl protein_coding_gene 356529 358662 . + . ID=Thaps25626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES7];external_name=Thaps25626;logic_name=jgi_thaps3 chr20 ensembl transcript 356529 358662 . + . ID=Thaps25626;Parent=Thaps25626;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 356529 356768 . + 0 ID=Thaps25626;Parent=Thaps25626;rank=1 chr20 . exon 356529 356768 . + . ID=Thaps25626.1;Parent=Thaps25626;constitutive=1;rank=1 chr20 . CDS 356867 357452 . + 0 ID=Thaps25626;Parent=Thaps25626;rank=2 chr20 . exon 356867 357452 . + . ID=Thaps25626.2;Parent=Thaps25626;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 357537 357808 . + 0 ID=Thaps25626;Parent=Thaps25626;rank=3 chr20 . exon 357537 357808 . + . ID=Thaps25626.3;Parent=Thaps25626;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 357889 358662 . + 0 ID=Thaps25626;Parent=Thaps25626;rank=4 chr20 . exon 357889 358662 . + . ID=Thaps25626.4;Parent=Thaps25626;constitutive=1;rank=4 chr20 ensembl protein_coding_gene 364790 367662 . + . ID=Thaps25629;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CET1];external_name=Thaps25629;logic_name=jgi_thaps3 chr20 ensembl transcript 364790 367662 . + . ID=Thaps25629;Parent=Thaps25629;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 364790 364960 . + 0 ID=Thaps25629;Parent=Thaps25629;rank=1 chr20 . exon 364790 364960 . + . ID=Thaps25629.1;Parent=Thaps25629;constitutive=1;rank=1 chr20 . CDS 365461 367662 . + 0 ID=Thaps25629;Parent=Thaps25629;rank=2 chr20 . exon 365461 367662 . + . ID=Thaps25629.2;Parent=Thaps25629;constitutive=1;rank=2 chr20 ensembl protein_coding_gene 358900 359148 . - . ID=Thaps264694;biotype=protein_coding;description=Low molecular weight heat shock protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES8];external_name=Thaps264694;logic_name=jgi_thaps3 chr20 ensembl transcript 358900 359148 . - . ID=Thaps264694;Parent=Thaps264694;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 358900 359148 . - 0 ID=Thaps264694;Parent=Thaps264694;rank=1 chr20 . exon 358900 359148 . - . ID=Thaps264694.1;Parent=Thaps264694;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 359957 360886 . + . ID=Thaps270031;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CES9];external_name=Thaps270031;logic_name=jgi_thaps3 chr20 ensembl transcript 359957 360886 . + . ID=Thaps270031;Parent=Thaps270031;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 359957 360886 . + 0 ID=Thaps270031;Parent=Thaps270031;rank=1 chr20 . exon 359957 360886 . + . ID=Thaps270031.1;Parent=Thaps270031;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 362809 364186 . + . ID=Thaps42946;biotype=protein_coding;description=Phospholid cytidylyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CET0];external_name=Thaps42946;logic_name=jgi_thaps3 chr20 ensembl transcript 362809 364186 . + . ID=Thaps42946;Parent=Thaps42946;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 362809 363250 . + 0 ID=Thaps42946;Parent=Thaps42946;rank=1 chr20 . exon 362809 363250 . + . ID=Thaps42946.1;Parent=Thaps42946;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 363335 363561 . + 0 ID=Thaps42946;Parent=Thaps42946;rank=2 chr20 . exon 363335 363561 . + . ID=Thaps42946.2;Parent=Thaps42946;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 363648 363879 . + 0 ID=Thaps42946;Parent=Thaps42946;rank=3 chr20 . exon 363648 363879 . + . ID=Thaps42946.3;Parent=Thaps42946;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 363963 364186 . + 0 ID=Thaps42946;Parent=Thaps42946;rank=4 chr20 . exon 363963 364186 . + . ID=Thaps42946.4;Parent=Thaps42946;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . repeat_region 366529 366978 . + . description=scaffold_4_165_3_420530_422436 chr20 ensembl protein_coding_gene 368506 369519 . - . ID=Thaps11529;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CET2];external_name=Thaps11529;logic_name=jgi_thaps3 chr20 ensembl transcript 368506 369519 . - . ID=Thaps11529;Parent=Thaps11529;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 368506 369519 . - 0 ID=Thaps11529;Parent=Thaps11529;rank=1 chr20 . exon 368506 369519 . - . ID=Thaps11529.1;Parent=Thaps11529;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 369915 371243 . + . ID=Thaps11530;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CET3];external_name=Thaps11530;logic_name=jgi_thaps3 chr20 ensembl transcript 369915 371243 . + . ID=Thaps11530;Parent=Thaps11530;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 369915 371243 . + 0 ID=Thaps11530;Parent=Thaps11530;rank=1 chr20 . exon 369915 371243 . + . ID=Thaps11530.1;Parent=Thaps11530;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 373241 374726 . - . ID=Thaps264699;biotype=protein_coding;description=Rcc1-repeat-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8CET4];external_name=Thaps264699;logic_name=jgi_thaps3 chr20 ensembl transcript 373241 374726 . - . ID=Thaps264699;Parent=Thaps264699;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 373241 373831 . - 0 ID=Thaps264699;Parent=Thaps264699;rank=4 chr20 . exon 373241 373831 . - . ID=Thaps264699.4;Parent=Thaps264699;constitutive=1;rank=4 chr20 . CDS 373904 374124 . - 0 ID=Thaps264699;Parent=Thaps264699;rank=3 chr20 . exon 373904 374124 . - . ID=Thaps264699.3;Parent=Thaps264699;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 374203 374474 . - 0 ID=Thaps264699;Parent=Thaps264699;rank=2 chr20 . exon 374203 374474 . - . ID=Thaps264699.2;Parent=Thaps264699;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 374681 374726 . - 0 ID=Thaps264699;Parent=Thaps264699;rank=1 chr20 . exon 374681 374726 . - . ID=Thaps264699.1;Parent=Thaps264699;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . repeat_region 378253 378306 . ? . description=trf chr20 . repeat_region 378265 378309 . ? . description=dust chr20 . repeat_region 379961 380020 . ? . description=dust chr20 ensembl protein_coding_gene 378588 379292 . - . ID=Thaps11534;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CET7];external_name=Thaps11534;logic_name=jgi_thaps3 chr20 ensembl transcript 378588 379292 . - . ID=Thaps11534;Parent=Thaps11534;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 378588 378919 . - 0 ID=Thaps11534;Parent=Thaps11534;rank=2 chr20 . exon 378588 378919 . - . ID=Thaps11534.2;Parent=Thaps11534;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 379040 379292 . - 0 ID=Thaps11534;Parent=Thaps11534;rank=1 chr20 . exon 379040 379292 . - . ID=Thaps11534.1;Parent=Thaps11534;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 384479 386384 . + . ID=Thaps11536;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CET9];external_name=Thaps11536;logic_name=jgi_thaps3 chr20 ensembl transcript 384479 386384 . + . ID=Thaps11536;Parent=Thaps11536;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 384479 384697 . + 0 ID=Thaps11536;Parent=Thaps11536;rank=1 chr20 . exon 384479 384697 . + . ID=Thaps11536.1;Parent=Thaps11536;constitutive=1;rank=1 chr20 . CDS 384728 385004 . + 0 ID=Thaps11536;Parent=Thaps11536;rank=2 chr20 . exon 384728 385004 . + . ID=Thaps11536.2;Parent=Thaps11536;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 385108 385347 . + 0 ID=Thaps11536;Parent=Thaps11536;rank=3 chr20 . exon 385108 385347 . + . ID=Thaps11536.3;Parent=Thaps11536;constitutive=1;rank=3 chr20 . CDS 385462 386384 . + 0 ID=Thaps11536;Parent=Thaps11536;rank=4 chr20 ensembl protein_coding_gene 380512 384000 . - . ID=Thaps25633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CET8];external_name=Thaps25633;logic_name=jgi_thaps3 chr20 ensembl transcript 380512 384000 . - . ID=Thaps25633;Parent=Thaps25633;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 380512 384000 . - 0 ID=Thaps25633;Parent=Thaps25633;rank=1 chr20 . exon 380512 384000 . - . ID=Thaps25633.1;Parent=Thaps25633;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 375566 376989 . + . ID=Thaps26046;biotype=protein_coding;description=RS3A%2C ribosomal protein 3A 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CET5];external_name=RS3A;logic_name=jgi_thaps3 chr20 ensembl transcript 375566 376989 . + . ID=Thaps26046;Parent=Thaps26046;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 375566 375574 . + 0 ID=Thaps26046;Parent=Thaps26046;rank=1 chr20 . exon 375566 375574 . + . ID=Thaps26046.1;Parent=Thaps26046;constitutive=1;rank=1 chr20 . CDS 376219 376989 . + 0 ID=Thaps26046;Parent=Thaps26046;rank=2 chr20 . exon 376219 376989 . + . ID=Thaps26046.2;Parent=Thaps26046;constitutive=1;rank=2 chr20 ensembl protein_coding_gene 377360 378226 . + . ID=Thaps270037;biotype=protein_coding;description=U2 SnRNP auxillary factor%2C splicing factor [Source:UniProtKB/TrEMBL%3BAcc:B8CET6];external_name=Thaps270037;logic_name=jgi_thaps3 chr20 ensembl transcript 377360 378226 . + . ID=Thaps270037;Parent=Thaps270037;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 377360 377404 . + 0 ID=Thaps270037;Parent=Thaps270037;rank=1 chr20 . exon 377360 377404 . + . ID=Thaps270037.1;Parent=Thaps270037;constitutive=1;rank=1 chr20 . CDS 377554 377774 . + 0 ID=Thaps270037;Parent=Thaps270037;rank=2 chr20 . exon 377554 377774 . + . ID=Thaps270037.2;Parent=Thaps270037;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 377902 378226 . + 0 ID=Thaps270037;Parent=Thaps270037;rank=3 chr20 . exon 377902 378226 . + . ID=Thaps270037.3;Parent=Thaps270037;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . repeat_region 386722 386985 . + . description=Harbinger4_TP chr20 . repeat_region 386989 390300 . + . description=Harbinger2_TP chr20 . repeat_region 393471 393523 . - . description=Harbinger4_TP chr20 . repeat_region 393919 397452 . - . description=Copia7I_TP chr20 . exon 385462 386384 . + . ID=Thaps11536.4;Parent=Thaps11536;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . repeat_region 403428 403468 . ? . description=trf chr20 . repeat_region 404765 404795 . ? . description=trf chr20 ensembl protein_coding_gene 398038 400027 . - . ID=Thaps11537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEU0];external_name=Thaps11537;logic_name=jgi_thaps3 chr20 ensembl transcript 398038 400027 . - . ID=Thaps11537;Parent=Thaps11537;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 398038 398608 . - 0 ID=Thaps11537;Parent=Thaps11537;rank=3 chr20 . exon 398038 398608 . - . ID=Thaps11537.3;Parent=Thaps11537;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 398685 399065 . - 0 ID=Thaps11537;Parent=Thaps11537;rank=2 chr20 . exon 398685 399065 . - . ID=Thaps11537.2;Parent=Thaps11537;constitutive=1;rank=2 chr20 . CDS 399144 400027 . - 0 ID=Thaps11537;Parent=Thaps11537;rank=1 chr20 . exon 399144 400027 . - . ID=Thaps11537.1;Parent=Thaps11537;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 400705 401889 . + . ID=Thaps25634;biotype=protein_coding;description=Pseudouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CEU1];external_name=Thaps25634;logic_name=jgi_thaps3 chr20 ensembl transcript 400705 401889 . + . ID=Thaps25634;Parent=Thaps25634;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 400705 401889 . + 0 ID=Thaps25634;Parent=Thaps25634;rank=1 chr20 . exon 400705 401889 . + . ID=Thaps25634.1;Parent=Thaps25634;constitutive=1;rank=1 chr20 . repeat_region 404659 408368 . + . description=Harbinger4_TP chr20 . repeat_region 408371 408420 . - . description=Harbinger4_TP chr20 . repeat_region 408583 408830 . - . description=TE2c_TP chr20 . repeat_region 408837 409295 . - . description=Harbinger2N_TP chr20 . repeat_region 408922 409745 . ? . description=dust chr20 . repeat_region 409300 409449 . - . description=Harbinger2N_TP chr20 . repeat_region 409452 410084 . - . description=Harbinger2N_TP chr20 . repeat_region 409757 409843 . ? . description=dust chr20 . repeat_region 409854 409938 . ? . description=dust chr20 . repeat_region 410920 411124 . - . description=Copia6I_TP chr20 . repeat_region 411809 412535 . - . description=Copia6I_TP chr20 ensembl protein_coding_gene 410795 413669 . - . ID=Thaps11539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEU2];external_name=Thaps11539;logic_name=jgi_thaps3 chr20 ensembl transcript 410795 413669 . - . ID=Thaps11539;Parent=Thaps11539;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 410795 410880 . - 0 ID=Thaps11539;Parent=Thaps11539;rank=4 chr20 . exon 410795 410880 . - . ID=Thaps11539.4;Parent=Thaps11539;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 411140 411261 . - 0 ID=Thaps11539;Parent=Thaps11539;rank=3 chr20 . exon 411140 411261 . - . ID=Thaps11539.3;Parent=Thaps11539;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 411320 411748 . - 0 ID=Thaps11539;Parent=Thaps11539;rank=2 chr20 . exon 411320 411748 . - . ID=Thaps11539.2;Parent=Thaps11539;constitutive=1;rank=2 chr20 . CDS 412702 413669 . - 0 ID=Thaps11539;Parent=Thaps11539;rank=1 chr20 . exon 412702 413669 . - . ID=Thaps11539.1;Parent=Thaps11539;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 414131 414565 . + . ID=Thaps11540;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEU3];external_name=Thaps11540;logic_name=jgi_thaps3 chr20 ensembl transcript 414131 414565 . + . ID=Thaps11540;Parent=Thaps11540;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 414131 414565 . + 0 ID=Thaps11540;Parent=Thaps11540;rank=1 chr20 . exon 414131 414565 . + . ID=Thaps11540.1;Parent=Thaps11540;constitutive=1;rank=1 chr20 . repeat_region 415162 415313 . ? . description=trf chr20 . repeat_region 416887 417139 . ? . description=trf chr20 . repeat_region 417037 417330 . ? . description=trf chr20 . repeat_region 421274 421314 . ? . description=trf chr20 . repeat_region 421531 421554 . ? . description=trf chr20 . repeat_region 422643 422683 . ? . description=trf chr20 . repeat_region 422900 422929 . ? . description=trf chr20 . repeat_region 423679 423797 . ? . description=trf chr20 ensembl protein_coding_gene 415478 416704 . - . ID=Thaps11541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEU4];external_name=Thaps11541;logic_name=jgi_thaps3 chr20 ensembl transcript 415478 416704 . - . ID=Thaps11541;Parent=Thaps11541;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 415478 415615 . - 0 ID=Thaps11541;Parent=Thaps11541;rank=3 chr20 . exon 415478 415615 . - . ID=Thaps11541.3;Parent=Thaps11541;constitutive=1;rank=3 chr20 . CDS 415651 415865 . - 0 ID=Thaps11541;Parent=Thaps11541;rank=2 chr20 . exon 415651 415865 . - . ID=Thaps11541.2;Parent=Thaps11541;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 415900 416704 . - 0 ID=Thaps11541;Parent=Thaps11541;rank=1 chr20 . exon 415900 416704 . - . ID=Thaps11541.1;Parent=Thaps11541;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 418550 419734 . + . ID=Thaps11542;biotype=protein_coding;description=Pseudouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CEU5];external_name=Thaps11542;logic_name=jgi_thaps3 chr20 ensembl transcript 418550 419734 . + . ID=Thaps11542;Parent=Thaps11542;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 418550 419734 . + 0 ID=Thaps11542;Parent=Thaps11542;rank=1 chr20 . exon 418550 419734 . + . ID=Thaps11542.1;Parent=Thaps11542;constitutive=1;rank=1 chr20 ensembl gene 424732 425134 . - . ID=Thaps264704;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr20 ensembl transcript 424732 425134 . - . ID=Thaps264704;Parent=Thaps264704;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr20 . exon 424732 424889 . - . ID=Thaps264704.2;Parent=Thaps264704;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . repeat_region 425393 428532 . + . description=Copia5I_TP chr20 . repeat_region 428533 428934 . + . description=Copia5LTR_TP chr20 . repeat_region 430122 430304 . + . description=Harbinger4_TP chr20 ensembl protein_coding_gene 429414 429842 . - . ID=Thaps11543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEU6];external_name=Thaps11543;logic_name=jgi_thaps3 chr20 ensembl transcript 429414 429842 . - . ID=Thaps11543;Parent=Thaps11543;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 429414 429842 . - 0 ID=Thaps11543;Parent=Thaps11543;rank=1 chr20 . exon 429414 429842 . - . ID=Thaps11543.1;Parent=Thaps11543;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 431637 432428 . - . ID=Thaps11545;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEU8];external_name=Thaps11545;logic_name=jgi_thaps3 chr20 ensembl transcript 431637 432428 . - . ID=Thaps11545;Parent=Thaps11545;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 431637 432428 . - 0 ID=Thaps11545;Parent=Thaps11545;rank=1 chr20 . exon 431637 432428 . - . ID=Thaps11545.1;Parent=Thaps11545;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 430383 431367 . + . ID=Thaps25635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEU7];external_name=Thaps25635;logic_name=jgi_thaps3 chr20 ensembl transcript 430383 431367 . + . ID=Thaps25635;Parent=Thaps25635;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 430383 430463 . + 0 ID=Thaps25635;Parent=Thaps25635;rank=1 chr20 . exon 430383 430463 . + . ID=Thaps25635.1;Parent=Thaps25635;constitutive=1;rank=1 chr20 . CDS 430576 431367 . + 0 ID=Thaps25635;Parent=Thaps25635;rank=2 chr20 . exon 430576 431367 . + . ID=Thaps25635.2;Parent=Thaps25635;constitutive=1;rank=2 chr20 . exon 424915 425134 . - . ID=Thaps264704.1;Parent=Thaps264704;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 433097 436712 . - . ID=Thaps270038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEU9];external_name=Thaps270038;logic_name=jgi_thaps3 chr20 ensembl transcript 433097 436712 . - . ID=Thaps270038;Parent=Thaps270038;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 433097 433252 . - 0 ID=Thaps270038;Parent=Thaps270038;rank=6 chr20 . exon 433097 433252 . - . ID=Thaps270038.6;Parent=Thaps270038;constitutive=1;rank=6 chr20 . CDS 433342 433520 . - 0 ID=Thaps270038;Parent=Thaps270038;rank=5 chr20 . exon 433342 433520 . - . ID=Thaps270038.5;Parent=Thaps270038;constitutive=1;ensembl_end_phase=2;rank=5 chr20 . CDS 433598 433810 . - 0 ID=Thaps270038;Parent=Thaps270038;rank=4 chr20 . exon 433598 433810 . - . ID=Thaps270038.4;Parent=Thaps270038;constitutive=1;rank=4 chr20 . CDS 433903 434068 . - 0 ID=Thaps270038;Parent=Thaps270038;rank=3 chr20 . exon 433903 434068 . - . ID=Thaps270038.3;Parent=Thaps270038;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 436374 436483 . - 0 ID=Thaps270038;Parent=Thaps270038;rank=2 chr20 . CDS 436580 436712 . - 0 ID=Thaps270038;Parent=Thaps270038;rank=1 chr20 . biological_region 443888 443890 0.999 - . logic_name=eponine chr20 ensembl protein_coding_gene 438144 441179 . - . ID=Thaps11548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEV1];external_name=Thaps11548;logic_name=jgi_thaps3 chr20 ensembl transcript 438144 441179 . - . ID=Thaps11548;Parent=Thaps11548;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 438144 440207 . - 0 ID=Thaps11548;Parent=Thaps11548;rank=2 chr20 . exon 438144 440207 . - . ID=Thaps11548.2;Parent=Thaps11548;constitutive=1;rank=2 chr20 . CDS 440307 441179 . - 0 ID=Thaps11548;Parent=Thaps11548;rank=1 chr20 . exon 440307 441179 . - . ID=Thaps11548.1;Parent=Thaps11548;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 437554 437868 . + . ID=Thaps25637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEV0];external_name=Thaps25637;logic_name=jgi_thaps3 chr20 ensembl transcript 437554 437868 . + . ID=Thaps25637;Parent=Thaps25637;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 437554 437868 . + 0 ID=Thaps25637;Parent=Thaps25637;rank=1 chr20 . exon 437554 437868 . + . ID=Thaps25637.1;Parent=Thaps25637;constitutive=1;rank=1 chr20 . exon 436374 436483 . - . ID=Thaps270038.2;Parent=Thaps270038;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . exon 436580 436712 . - . ID=Thaps270038.1;Parent=Thaps270038;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl gene 449646 451313 . - . ID=Thaps25639;biotype=nontranslating_CDS;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEV3];external_name=Thaps24712;logic_name=jgi_thaps3 chr20 ensembl transcript 449646 451313 . - . ID=Thaps25639;Parent=Thaps25639;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr20 . exon 449646 449646 . - . ID=Thaps25639.2;Parent=Thaps25639;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . exon 449727 451313 . - . ID=Thaps25639.1;Parent=Thaps25639;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 452035 456943 . - . ID=Thaps25640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEV4];external_name=Thaps25640;logic_name=jgi_thaps3 chr20 ensembl transcript 452035 456943 . - . ID=Thaps25640;Parent=Thaps25640;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 452035 452119 . - 0 ID=Thaps25640;Parent=Thaps25640;rank=5 chr20 . exon 452035 452119 . - . ID=Thaps25640.5;Parent=Thaps25640;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . CDS 452210 453300 . - 0 ID=Thaps25640;Parent=Thaps25640;rank=4 chr20 . exon 452210 453300 . - . ID=Thaps25640.4;Parent=Thaps25640;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 453380 456105 . - 0 ID=Thaps25640;Parent=Thaps25640;rank=3 chr20 . exon 453380 456105 . - . ID=Thaps25640.3;Parent=Thaps25640;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 456646 456816 . - 0 ID=Thaps25640;Parent=Thaps25640;rank=2 chr20 . CDS 456883 456943 . - 0 ID=Thaps25640;Parent=Thaps25640;rank=1 chr20 ensembl protein_coding_gene 447083 448282 . + . ID=Thaps38555;biotype=protein_coding;description=Kinesin motor protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEV2];external_name=Thaps38555;logic_name=jgi_thaps3 chr20 ensembl transcript 447083 448282 . + . ID=Thaps38555;Parent=Thaps38555;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 447083 447616 . + 0 ID=Thaps38555;Parent=Thaps38555;rank=1 chr20 . exon 447083 447616 . + . ID=Thaps38555.1;Parent=Thaps38555;constitutive=1;rank=1 chr20 . CDS 447689 448282 . + 0 ID=Thaps38555;Parent=Thaps38555;rank=2 chr20 . exon 447689 448282 . + . ID=Thaps38555.2;Parent=Thaps38555;constitutive=1;rank=2 chr20 . biological_region 460291 460293 0.999 - . logic_name=eponine chr20 . repeat_region 461349 461466 . ? . description=trf chr20 . repeat_region 462729 462783 . ? . description=trf chr20 . repeat_region 463382 463865 . ? . description=trf chr20 . exon 456646 456816 . - . ID=Thaps25640.2;Parent=Thaps25640;constitutive=1;rank=2 chr20 . exon 456883 456943 . - . ID=Thaps25640.1;Parent=Thaps25640;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 457403 458005 . + . ID=Thaps42962;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein 5 [Source:UniProtKB/TrEMBL%3BAcc:B8CEV5];external_name=LHCF5;logic_name=jgi_thaps3 chr20 ensembl transcript 457403 458005 . + . ID=Thaps42962;Parent=Thaps42962;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 457403 458005 . + 0 ID=Thaps42962;Parent=Thaps42962;rank=1 chr20 . exon 457403 458005 . + . ID=Thaps42962.1;Parent=Thaps42962;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 471509 472929 . - . ID=Thaps11557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEW0];external_name=Thaps11557;logic_name=jgi_thaps3 chr20 ensembl transcript 471509 472929 . - . ID=Thaps11557;Parent=Thaps11557;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 471509 471576 . - 0 ID=Thaps11557;Parent=Thaps11557;rank=2 chr20 . exon 471509 471576 . - . ID=Thaps11557.2;Parent=Thaps11557;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 471666 472929 . - 0 ID=Thaps11557;Parent=Thaps11557;rank=1 chr20 . exon 471666 472929 . - . ID=Thaps11557.1;Parent=Thaps11557;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 464716 465440 . + . ID=Thaps264711;biotype=protein_coding;description=Zinc finger like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEV6];external_name=ZFP3;logic_name=jgi_thaps3 chr20 ensembl transcript 464716 465440 . + . ID=Thaps264711;Parent=Thaps264711;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 464716 465440 . + 0 ID=Thaps264711;Parent=Thaps264711;rank=1 chr20 . exon 464716 465440 . + . ID=Thaps264711.1;Parent=Thaps264711;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 470462 471032 . + . ID=Thaps264714;biotype=protein_coding;description=Fucoxanthin chl a/c protein-deviant sequence [Source:UniProtKB/TrEMBL%3BAcc:B8CEV9];external_name=Thaps264714;logic_name=jgi_thaps3 chr20 ensembl transcript 470462 471032 . + . ID=Thaps264714;Parent=Thaps264714;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 470462 470503 . + 0 ID=Thaps264714;Parent=Thaps264714;rank=1 chr20 . exon 470462 470503 . + . ID=Thaps264714.1;Parent=Thaps264714;constitutive=1;rank=1 chr20 . CDS 470582 470676 . + 0 ID=Thaps264714;Parent=Thaps264714;rank=2 chr20 . exon 470582 470676 . + . ID=Thaps264714.2;Parent=Thaps264714;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 470690 471032 . + 0 ID=Thaps264714;Parent=Thaps264714;rank=3 chr20 . exon 470690 471032 . + . ID=Thaps264714.3;Parent=Thaps264714;constitutive=1;ensembl_end_phase=1;rank=3 chr20 ensembl protein_coding_gene 468610 469276 . - . ID=Thaps38494;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein 1 [Source:UniProtKB/TrEMBL%3BAcc:B8CFW3];external_name=LHCF2;logic_name=jgi_thaps3 chr20 ensembl transcript 468610 469276 . - . ID=Thaps38494;Parent=Thaps38494;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 468610 469095 . - 0 ID=Thaps38494;Parent=Thaps38494;rank=2 chr20 . exon 468610 469095 . - . ID=Thaps38494.2;Parent=Thaps38494;constitutive=1;rank=2 chr20 . CDS 469190 469276 . - 0 ID=Thaps38494;Parent=Thaps38494;rank=1 chr20 . exon 469190 469276 . - . ID=Thaps38494.1;Parent=Thaps38494;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 465581 467224 . - . ID=Thaps42965;biotype=protein_coding;description=Fad-linked oxidase [Source:UniProtKB/TrEMBL%3BAcc:B8CEV7];external_name=Thaps42965;logic_name=jgi_thaps3 chr20 ensembl transcript 465581 467224 . - . ID=Thaps42965;Parent=Thaps42965;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 465581 466520 . - 0 ID=Thaps42965;Parent=Thaps42965;rank=2 chr20 . exon 465581 466520 . - . ID=Thaps42965.2;Parent=Thaps42965;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 466575 467224 . - 0 ID=Thaps42965;Parent=Thaps42965;rank=1 chr20 . exon 466575 467224 . - . ID=Thaps42965.1;Parent=Thaps42965;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 474078 477218 . + . ID=Thaps42971;biotype=protein_coding;description=Valine--tRNA ligase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEW1];external_name=Thaps42971;logic_name=jgi_thaps3 chr20 ensembl transcript 474078 477218 . + . ID=Thaps42971;Parent=Thaps42971;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 474078 474234 . + 0 ID=Thaps42971;Parent=Thaps42971;rank=1 chr20 . exon 474078 474234 . + . ID=Thaps42971.1;Parent=Thaps42971;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 474452 475200 . + 0 ID=Thaps42971;Parent=Thaps42971;rank=2 chr20 . CDS 475286 475996 . + 0 ID=Thaps42971;Parent=Thaps42971;rank=3 chr20 . CDS 476076 476342 . + 0 ID=Thaps42971;Parent=Thaps42971;rank=4 chr20 . CDS 476427 477218 . + 0 ID=Thaps42971;Parent=Thaps42971;rank=5 chr20 . repeat_region 481722 481738 . ? . description=dust chr20 . repeat_region 482061 482100 . ? . description=dust chr20 . repeat_region 482310 482340 . ? . description=trf chr20 . repeat_region 482310 482340 . ? . description=dust chr20 . repeat_region 482564 482619 . ? . description=dust chr20 ensembl protein_coding_gene 478432 478971 . - . ID=Thaps11559;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEW2];external_name=Thaps11559;logic_name=jgi_thaps3 chr20 ensembl transcript 478432 478971 . - . ID=Thaps11559;Parent=Thaps11559;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 478432 478971 . - 0 ID=Thaps11559;Parent=Thaps11559;rank=1 chr20 . exon 478432 478971 . - . ID=Thaps11559.1;Parent=Thaps11559;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 479956 481059 . + . ID=Thaps264717;biotype=protein_coding;description=Aspartoacylase [Source:UniProtKB/TrEMBL%3BAcc:B8CEW3];external_name=Thaps264717;logic_name=jgi_thaps3 chr20 ensembl transcript 479956 481059 . + . ID=Thaps264717;Parent=Thaps264717;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 479956 480038 . + 0 ID=Thaps264717;Parent=Thaps264717;rank=1 chr20 . exon 479956 480038 . + . ID=Thaps264717.1;Parent=Thaps264717;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 480055 480061 . + 0 ID=Thaps264717;Parent=Thaps264717;rank=2 chr20 . exon 480055 480061 . + . ID=Thaps264717.2;Parent=Thaps264717;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 480106 480219 . + 0 ID=Thaps264717;Parent=Thaps264717;rank=3 chr20 . exon 480106 480219 . + . ID=Thaps264717.3;Parent=Thaps264717;constitutive=1;rank=3 chr20 . CDS 480307 480504 . + 0 ID=Thaps264717;Parent=Thaps264717;rank=4 chr20 . exon 480307 480504 . + . ID=Thaps264717.4;Parent=Thaps264717;constitutive=1;rank=4 chr20 . CDS 480529 480728 . + 0 ID=Thaps264717;Parent=Thaps264717;rank=5 chr20 . exon 480529 480728 . + . ID=Thaps264717.5;Parent=Thaps264717;constitutive=1;ensembl_end_phase=2;rank=5 chr20 . CDS 480807 481059 . + 0 ID=Thaps264717;Parent=Thaps264717;rank=6 chr20 . exon 480807 481059 . + . ID=Thaps264717.6;Parent=Thaps264717;constitutive=1;ensembl_end_phase=1;rank=6 chr20 ensembl protein_coding_gene 483172 483639 . + . ID=Thaps264718;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEW4];external_name=MYB27;logic_name=jgi_thaps3 chr20 ensembl transcript 483172 483639 . + . ID=Thaps264718;Parent=Thaps264718;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 483172 483639 . + 0 ID=Thaps264718;Parent=Thaps264718;rank=1 chr20 . exon 483172 483639 . + . ID=Thaps264718.1;Parent=Thaps264718;constitutive=1;rank=1 chr20 . exon 474452 475200 . + . ID=Thaps42971.2;Parent=Thaps42971;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . exon 475286 475996 . + . ID=Thaps42971.3;Parent=Thaps42971;constitutive=1;rank=3 chr20 . exon 476076 476342 . + . ID=Thaps42971.4;Parent=Thaps42971;constitutive=1;rank=4 chr20 . exon 476427 477218 . + . ID=Thaps42971.5;Parent=Thaps42971;constitutive=1;rank=5 chr20 . repeat_region 485376 487592 . - . description=Harbinger4_TP chr20 . repeat_region 487594 488359 . - . description=Harbinger4_TP chr20 ensembl protein_coding_gene 489097 501304 . - . ID=Thaps11562;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEW5];external_name=Thaps11562;logic_name=jgi_thaps3 chr20 ensembl transcript 489097 501304 . - . ID=Thaps11562;Parent=Thaps11562;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 489097 489125 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=61 chr20 . exon 489097 489125 . - . ID=Thaps11562.61;Parent=Thaps11562;constitutive=1;ensembl_end_phase=2;rank=61 chr20 . CDS 489214 489382 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=60 chr20 . exon 489214 489382 . - . ID=Thaps11562.60;Parent=Thaps11562;constitutive=1;ensembl_end_phase=1;rank=60 chr20 . CDS 489422 489454 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=59 chr20 . exon 489422 489454 . - . ID=Thaps11562.59;Parent=Thaps11562;constitutive=1;rank=59 chr20 . CDS 489582 489674 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=58 chr20 . exon 489582 489674 . - . ID=Thaps11562.58;Parent=Thaps11562;constitutive=1;rank=58 chr20 . CDS 489772 489804 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=57 chr20 . exon 489772 489804 . - . ID=Thaps11562.57;Parent=Thaps11562;constitutive=1;rank=57 chr20 . CDS 489932 490018 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=56 chr20 . exon 489932 490018 . - . ID=Thaps11562.56;Parent=Thaps11562;constitutive=1;rank=56 chr20 . CDS 490116 490148 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=55 chr20 . exon 490116 490148 . - . ID=Thaps11562.55;Parent=Thaps11562;constitutive=1;rank=55 chr20 . CDS 490276 490368 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=54 chr20 . exon 490276 490368 . - . ID=Thaps11562.54;Parent=Thaps11562;constitutive=1;rank=54 chr20 . CDS 490466 490498 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=53 chr20 . exon 490466 490498 . - . ID=Thaps11562.53;Parent=Thaps11562;constitutive=1;rank=53 chr20 . CDS 490610 490702 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=52 chr20 . exon 490610 490702 . - . ID=Thaps11562.52;Parent=Thaps11562;constitutive=1;rank=52 chr20 . CDS 490800 490832 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=51 chr20 . exon 490800 490832 . - . ID=Thaps11562.51;Parent=Thaps11562;constitutive=1;rank=51 chr20 . CDS 490960 491052 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=50 chr20 . exon 490960 491052 . - . ID=Thaps11562.50;Parent=Thaps11562;constitutive=1;rank=50 chr20 . CDS 491150 491182 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=49 chr20 . exon 491150 491182 . - . ID=Thaps11562.49;Parent=Thaps11562;constitutive=1;rank=49 chr20 . CDS 491310 491402 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=48 chr20 . exon 491310 491402 . - . ID=Thaps11562.48;Parent=Thaps11562;constitutive=1;rank=48 chr20 . CDS 491500 491532 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=47 chr20 . exon 491500 491532 . - . ID=Thaps11562.47;Parent=Thaps11562;constitutive=1;rank=47 chr20 . CDS 491660 491752 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=46 chr20 . exon 491660 491752 . - . ID=Thaps11562.46;Parent=Thaps11562;constitutive=1;rank=46 chr20 . CDS 491850 491882 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=45 chr20 . exon 491850 491882 . - . ID=Thaps11562.45;Parent=Thaps11562;constitutive=1;rank=45 chr20 . CDS 492010 492102 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=44 chr20 . exon 492010 492102 . - . ID=Thaps11562.44;Parent=Thaps11562;constitutive=1;rank=44 chr20 . CDS 492200 492232 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=43 chr20 . exon 492200 492232 . - . ID=Thaps11562.43;Parent=Thaps11562;constitutive=1;rank=43 chr20 . CDS 492360 492458 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=42 chr20 . exon 492360 492458 . - . ID=Thaps11562.42;Parent=Thaps11562;constitutive=1;rank=42 chr20 . CDS 492533 492568 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=41 chr20 . exon 492533 492568 . - . ID=Thaps11562.41;Parent=Thaps11562;constitutive=1;rank=41 chr20 . CDS 492819 492854 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=40 chr20 . exon 492819 492854 . - . ID=Thaps11562.40;Parent=Thaps11562;constitutive=1;rank=40 chr20 . CDS 492993 493186 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=39 chr20 . exon 492993 493186 . - . ID=Thaps11562.39;Parent=Thaps11562;constitutive=1;ensembl_end_phase=2;rank=39 chr20 . CDS 493262 493297 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=38 chr20 . exon 493262 493297 . - . ID=Thaps11562.38;Parent=Thaps11562;constitutive=1;rank=38 chr20 . CDS 493407 493442 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=37 chr20 . exon 493407 493442 . - . ID=Thaps11562.37;Parent=Thaps11562;constitutive=1;rank=37 chr20 . CDS 493581 493616 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=36 chr20 . exon 493581 493616 . - . ID=Thaps11562.36;Parent=Thaps11562;constitutive=1;rank=36 chr20 . CDS 493855 493890 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=35 chr20 . exon 493855 493890 . - . ID=Thaps11562.35;Parent=Thaps11562;constitutive=1;rank=35 chr20 . CDS 494000 494035 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=34 chr20 . exon 494000 494035 . - . ID=Thaps11562.34;Parent=Thaps11562;constitutive=1;rank=34 chr20 . CDS 494174 494209 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=33 chr20 . CDS 494448 494483 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=32 chr20 . CDS 494593 494628 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=31 chr20 . CDS 494767 494802 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=30 chr20 . CDS 495041 495131 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=29 chr20 . CDS 495186 495221 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=28 chr20 . CDS 495360 495674 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=27 chr20 . CDS 495784 495819 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=26 chr20 . CDS 495958 496151 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=25 chr20 . CDS 496232 496267 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=24 chr20 . CDS 496377 496412 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=23 chr20 . CDS 496551 496586 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=22 chr20 . CDS 496825 496860 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=21 chr20 . CDS 496970 497005 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=20 chr20 . CDS 497144 497179 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=19 chr20 . CDS 497418 497508 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=18 chr20 . CDS 497563 497598 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=17 chr20 . CDS 497737 498051 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=16 chr20 . CDS 498161 498196 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=15 chr20 . CDS 498335 498528 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=14 chr20 . CDS 498609 498699 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=13 chr20 . CDS 498754 498789 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=12 chr20 . CDS 498928 499121 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=11 chr20 . CDS 499197 499232 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=10 chr20 . CDS 499342 499377 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=9 chr20 . CDS 499516 499551 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=8 chr20 . CDS 499790 499961 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=7 chr20 . CDS 500047 500101 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=6 chr20 . CDS 500202 500300 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=5 chr20 . CDS 500392 500656 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=4 chr20 . CDS 500754 500841 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=3 chr20 . CDS 500952 501094 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=2 chr20 . CDS 501121 501304 . - 0 ID=Thaps11562;Parent=Thaps11562;rank=1 chr20 . repeat_region 495562 495588 . ? . description=trf chr20 . repeat_region 497939 497965 . ? . description=trf chr20 . repeat_region 500980 500987 . ? . description=dust chr20 . repeat_region 501447 501469 . ? . description=trf chr20 . repeat_region 501456 501627 . ? . description=trf chr20 . repeat_region 501553 501850 . ? . description=trf chr20 . repeat_region 501721 501749 . ? . description=trf chr20 . exon 494174 494209 . - . ID=Thaps11562.33;Parent=Thaps11562;constitutive=1;rank=33 chr20 . exon 494448 494483 . - . ID=Thaps11562.32;Parent=Thaps11562;constitutive=1;rank=32 chr20 . exon 494593 494628 . - . ID=Thaps11562.31;Parent=Thaps11562;constitutive=1;rank=31 chr20 . exon 494767 494802 . - . ID=Thaps11562.30;Parent=Thaps11562;constitutive=1;rank=30 chr20 . exon 495041 495131 . - . ID=Thaps11562.29;Parent=Thaps11562;constitutive=1;ensembl_end_phase=1;rank=29 chr20 . exon 495186 495221 . - . ID=Thaps11562.28;Parent=Thaps11562;constitutive=1;rank=28 chr20 . exon 495360 495674 . - . ID=Thaps11562.27;Parent=Thaps11562;constitutive=1;rank=27 chr20 . exon 495784 495819 . - . ID=Thaps11562.26;Parent=Thaps11562;constitutive=1;rank=26 chr20 . exon 495958 496151 . - . ID=Thaps11562.25;Parent=Thaps11562;constitutive=1;ensembl_end_phase=2;rank=25 chr20 . exon 496232 496267 . - . ID=Thaps11562.24;Parent=Thaps11562;constitutive=1;rank=24 chr20 . exon 496377 496412 . - . ID=Thaps11562.23;Parent=Thaps11562;constitutive=1;rank=23 chr20 . exon 496551 496586 . - . ID=Thaps11562.22;Parent=Thaps11562;constitutive=1;rank=22 chr20 . exon 496825 496860 . - . ID=Thaps11562.21;Parent=Thaps11562;constitutive=1;rank=21 chr20 . exon 496970 497005 . - . ID=Thaps11562.20;Parent=Thaps11562;constitutive=1;rank=20 chr20 . exon 497144 497179 . - . ID=Thaps11562.19;Parent=Thaps11562;constitutive=1;rank=19 chr20 . exon 497418 497508 . - . ID=Thaps11562.18;Parent=Thaps11562;constitutive=1;ensembl_end_phase=1;rank=18 chr20 . exon 497563 497598 . - . ID=Thaps11562.17;Parent=Thaps11562;constitutive=1;rank=17 chr20 . exon 497737 498051 . - . ID=Thaps11562.16;Parent=Thaps11562;constitutive=1;rank=16 chr20 . exon 498161 498196 . - . ID=Thaps11562.15;Parent=Thaps11562;constitutive=1;rank=15 chr20 . exon 498335 498528 . - . ID=Thaps11562.14;Parent=Thaps11562;constitutive=1;ensembl_end_phase=2;rank=14 chr20 . exon 498609 498699 . - . ID=Thaps11562.13;Parent=Thaps11562;constitutive=1;ensembl_end_phase=1;rank=13 chr20 . exon 498754 498789 . - . ID=Thaps11562.12;Parent=Thaps11562;constitutive=1;rank=12 chr20 . exon 498928 499121 . - . ID=Thaps11562.11;Parent=Thaps11562;constitutive=1;ensembl_end_phase=2;rank=11 chr20 . exon 499197 499232 . - . ID=Thaps11562.10;Parent=Thaps11562;constitutive=1;rank=10 chr20 . exon 499342 499377 . - . ID=Thaps11562.9;Parent=Thaps11562;constitutive=1;rank=9 chr20 . exon 499516 499551 . - . ID=Thaps11562.8;Parent=Thaps11562;constitutive=1;rank=8 chr20 . exon 499790 499961 . - . ID=Thaps11562.7;Parent=Thaps11562;constitutive=1;ensembl_end_phase=1;rank=7 chr20 . exon 500047 500101 . - . ID=Thaps11562.6;Parent=Thaps11562;constitutive=1;ensembl_end_phase=1;rank=6 chr20 . exon 500202 500300 . - . ID=Thaps11562.5;Parent=Thaps11562;constitutive=1;rank=5 chr20 . exon 500392 500656 . - . ID=Thaps11562.4;Parent=Thaps11562;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . exon 500754 500841 . - . ID=Thaps11562.3;Parent=Thaps11562;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . exon 500952 501094 . - . ID=Thaps11562.2;Parent=Thaps11562;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . exon 501121 501304 . - . ID=Thaps11562.1;Parent=Thaps11562;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . repeat_region 513079 513229 . - . description=Gypsy1LTR_TP chr20 ensembl protein_coding_gene 505087 505635 . + . ID=Thaps11563;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEW6];external_name=Thaps11563;logic_name=jgi_thaps3 chr20 ensembl transcript 505087 505635 . + . ID=Thaps11563;Parent=Thaps11563;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 505087 505635 . + 0 ID=Thaps11563;Parent=Thaps11563;rank=1 chr20 . exon 505087 505635 . + . ID=Thaps11563.1;Parent=Thaps11563;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 507795 511554 . - . ID=Thaps11564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEW8];external_name=Thaps11564;logic_name=jgi_thaps3 chr20 ensembl transcript 507795 511554 . - . ID=Thaps11564;Parent=Thaps11564;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 507795 508668 . - 0 ID=Thaps11564;Parent=Thaps11564;rank=4 chr20 . exon 507795 508668 . - . ID=Thaps11564.4;Parent=Thaps11564;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . CDS 508864 510114 . - 0 ID=Thaps11564;Parent=Thaps11564;rank=3 chr20 . exon 508864 510114 . - . ID=Thaps11564.3;Parent=Thaps11564;constitutive=1;rank=3 chr20 . CDS 510202 510968 . - 0 ID=Thaps11564;Parent=Thaps11564;rank=2 chr20 . exon 510202 510968 . - . ID=Thaps11564.2;Parent=Thaps11564;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 511117 511554 . - 0 ID=Thaps11564;Parent=Thaps11564;rank=1 chr20 . exon 511117 511554 . - . ID=Thaps11564.1;Parent=Thaps11564;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 505689 506264 . - . ID=Thaps38466;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEW7];external_name=Thaps38466;logic_name=jgi_thaps3 chr20 ensembl transcript 505689 506264 . - . ID=Thaps38466;Parent=Thaps38466;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 505689 505939 . - 0 ID=Thaps38466;Parent=Thaps38466;rank=2 chr20 . exon 505689 505939 . - . ID=Thaps38466.2;Parent=Thaps38466;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 506045 506264 . - 0 ID=Thaps38466;Parent=Thaps38466;rank=1 chr20 . exon 506045 506264 . - . ID=Thaps38466.1;Parent=Thaps38466;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . repeat_region 516308 516315 . ? . description=dust chr20 . repeat_region 517102 517184 . ? . description=trf chr20 . repeat_region 517103 517159 . ? . description=trf chr20 . repeat_region 517296 517801 . ? . description=trf chr20 . repeat_region 517448 517568 . ? . description=trf chr20 . repeat_region 517695 517801 . ? . description=trf chr20 . repeat_region 517991 518090 . ? . description=trf chr20 . repeat_region 518630 518791 . ? . description=trf chr20 . repeat_region 518753 519029 . ? . description=trf chr20 ensembl protein_coding_gene 520958 521701 . + . ID=Thaps11569;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX3];external_name=Thaps11569;logic_name=jgi_thaps3 chr20 ensembl transcript 520958 521701 . + . ID=Thaps11569;Parent=Thaps11569;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 520958 521701 . + 0 ID=Thaps11569;Parent=Thaps11569;rank=1 chr20 . exon 520958 521701 . + . ID=Thaps11569.1;Parent=Thaps11569;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 513879 514721 . + . ID=Thaps25647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEW9];external_name=Thaps25647;logic_name=jgi_thaps3 chr20 ensembl transcript 513879 514721 . + . ID=Thaps25647;Parent=Thaps25647;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 513879 514721 . + 0 ID=Thaps25647;Parent=Thaps25647;rank=1 chr20 . exon 513879 514721 . + . ID=Thaps25647.1;Parent=Thaps25647;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 515187 515858 . + . ID=Thaps25648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX0];external_name=Thaps25648;logic_name=jgi_thaps3 chr20 ensembl transcript 515187 515858 . + . ID=Thaps25648;Parent=Thaps25648;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 515187 515858 . + 0 ID=Thaps25648;Parent=Thaps25648;rank=1 chr20 . exon 515187 515858 . + . ID=Thaps25648.1;Parent=Thaps25648;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 516591 519266 . + . ID=Thaps25649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX1];external_name=CINW3;logic_name=jgi_thaps3 chr20 ensembl transcript 516591 519266 . + . ID=Thaps25649;Parent=Thaps25649;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 516591 516650 . + 0 ID=Thaps25649;Parent=Thaps25649;rank=1 chr20 . exon 516591 516650 . + . ID=Thaps25649.1;Parent=Thaps25649;constitutive=1;rank=1 chr20 . CDS 516877 516940 . + 0 ID=Thaps25649;Parent=Thaps25649;rank=2 chr20 . exon 516877 516940 . + . ID=Thaps25649.2;Parent=Thaps25649;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 517048 517323 . + 0 ID=Thaps25649;Parent=Thaps25649;rank=3 chr20 . exon 517048 517323 . + . ID=Thaps25649.3;Parent=Thaps25649;constitutive=1;rank=3 chr20 . CDS 517430 517570 . + 0 ID=Thaps25649;Parent=Thaps25649;rank=4 chr20 . exon 517430 517570 . + . ID=Thaps25649.4;Parent=Thaps25649;constitutive=1;rank=4 chr20 . CDS 517677 517793 . + 0 ID=Thaps25649;Parent=Thaps25649;rank=5 chr20 . exon 517677 517793 . + . ID=Thaps25649.5;Parent=Thaps25649;constitutive=1;rank=5 chr20 . CDS 517882 518213 . + 0 ID=Thaps25649;Parent=Thaps25649;rank=6 chr20 . exon 517882 518213 . + . ID=Thaps25649.6;Parent=Thaps25649;constitutive=1;ensembl_end_phase=2;rank=6 chr20 . CDS 518310 518469 . + 0 ID=Thaps25649;Parent=Thaps25649;rank=7 chr20 . exon 518310 518469 . + . ID=Thaps25649.7;Parent=Thaps25649;constitutive=1;ensembl_end_phase=1;rank=7 chr20 . CDS 518569 519266 . + 0 ID=Thaps25649;Parent=Thaps25649;rank=8 chr20 . exon 518569 519266 . + . ID=Thaps25649.8;Parent=Thaps25649;constitutive=1;ensembl_end_phase=2;rank=8 chr20 ensembl protein_coding_gene 520092 520592 . - . ID=Thaps38449;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX2];external_name=Thaps38449;logic_name=jgi_thaps3 chr20 ensembl transcript 520092 520592 . - . ID=Thaps38449;Parent=Thaps38449;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 520092 520255 . - 0 ID=Thaps38449;Parent=Thaps38449;rank=3 chr20 . exon 520092 520255 . - . ID=Thaps38449.3;Parent=Thaps38449;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 520346 520371 . - 0 ID=Thaps38449;Parent=Thaps38449;rank=2 chr20 . exon 520346 520371 . - . ID=Thaps38449.2;Parent=Thaps38449;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 520450 520592 . - 0 ID=Thaps38449;Parent=Thaps38449;rank=1 chr20 . exon 520450 520592 . - . ID=Thaps38449.1;Parent=Thaps38449;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 523501 524268 . + . ID=Thaps38510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX4];external_name=Thaps38510;logic_name=jgi_thaps3 chr20 ensembl transcript 523501 524268 . + . ID=Thaps38510;Parent=Thaps38510;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 523501 524268 . + 0 ID=Thaps38510;Parent=Thaps38510;rank=1 chr20 . exon 523501 524268 . + . ID=Thaps38510.1;Parent=Thaps38510;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 525484 526056 . + . ID=Thaps11572;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX6];external_name=Thaps11572;logic_name=jgi_thaps3 chr20 ensembl transcript 525484 526056 . + . ID=Thaps11572;Parent=Thaps11572;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 525484 526056 . + 0 ID=Thaps11572;Parent=Thaps11572;rank=1 chr20 . exon 525484 526056 . + . ID=Thaps11572.1;Parent=Thaps11572;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 531629 533580 . - . ID=Thaps11575;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX9];external_name=Thaps11575;logic_name=jgi_thaps3 chr20 ensembl transcript 531629 533580 . - . ID=Thaps11575;Parent=Thaps11575;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 531629 531886 . - 0 ID=Thaps11575;Parent=Thaps11575;rank=6 chr20 . exon 531629 531886 . - . ID=Thaps11575.6;Parent=Thaps11575;constitutive=1;rank=6 chr20 . CDS 531970 532391 . - 0 ID=Thaps11575;Parent=Thaps11575;rank=5 chr20 . exon 531970 532391 . - . ID=Thaps11575.5;Parent=Thaps11575;constitutive=1;ensembl_end_phase=2;rank=5 chr20 . CDS 532504 532628 . - 0 ID=Thaps11575;Parent=Thaps11575;rank=4 chr20 . exon 532504 532628 . - . ID=Thaps11575.4;Parent=Thaps11575;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 532660 532978 . - 0 ID=Thaps11575;Parent=Thaps11575;rank=3 chr20 . exon 532660 532978 . - . ID=Thaps11575.3;Parent=Thaps11575;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 533291 533410 . - 0 ID=Thaps11575;Parent=Thaps11575;rank=2 chr20 . exon 533291 533410 . - . ID=Thaps11575.2;Parent=Thaps11575;constitutive=1;rank=2 chr20 . CDS 533430 533580 . - 0 ID=Thaps11575;Parent=Thaps11575;rank=1 chr20 . exon 533430 533580 . - . ID=Thaps11575.1;Parent=Thaps11575;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 524452 525279 . - . ID=Thaps25650;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX5];external_name=Thaps25650;logic_name=jgi_thaps3 chr20 ensembl transcript 524452 525279 . - . ID=Thaps25650;Parent=Thaps25650;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 524452 525027 . - 0 ID=Thaps25650;Parent=Thaps25650;rank=2 chr20 . exon 524452 525027 . - . ID=Thaps25650.2;Parent=Thaps25650;constitutive=1;rank=2 chr20 . CDS 525160 525279 . - 0 ID=Thaps25650;Parent=Thaps25650;rank=1 chr20 . exon 525160 525279 . - . ID=Thaps25650.1;Parent=Thaps25650;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 526275 528717 . - . ID=Thaps25651;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX7];external_name=Thaps25651;logic_name=jgi_thaps3 chr20 ensembl transcript 526275 528717 . - . ID=Thaps25651;Parent=Thaps25651;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 526275 527801 . - 0 ID=Thaps25651;Parent=Thaps25651;rank=2 chr20 . exon 526275 527801 . - . ID=Thaps25651.2;Parent=Thaps25651;constitutive=1;rank=2 chr20 . CDS 527944 528717 . - 0 ID=Thaps25651;Parent=Thaps25651;rank=1 chr20 . exon 527944 528717 . - . ID=Thaps25651.1;Parent=Thaps25651;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 529135 531366 . + . ID=Thaps25652;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEX8];external_name=Thaps25652;logic_name=jgi_thaps3 chr20 ensembl transcript 529135 531366 . + . ID=Thaps25652;Parent=Thaps25652;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 529135 531366 . + 0 ID=Thaps25652;Parent=Thaps25652;rank=1 chr20 . exon 529135 531366 . + . ID=Thaps25652.1;Parent=Thaps25652;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 534323 535109 . - . ID=Thaps11576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY0];external_name=Thaps11576;logic_name=jgi_thaps3 chr20 ensembl transcript 534323 535109 . - . ID=Thaps11576;Parent=Thaps11576;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 534323 534660 . - 0 ID=Thaps11576;Parent=Thaps11576;rank=3 chr20 . exon 534323 534660 . - . ID=Thaps11576.3;Parent=Thaps11576;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 534703 534830 . - 0 ID=Thaps11576;Parent=Thaps11576;rank=2 chr20 . exon 534703 534830 . - . ID=Thaps11576.2;Parent=Thaps11576;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 534967 535109 . - 0 ID=Thaps11576;Parent=Thaps11576;rank=1 chr20 . exon 534967 535109 . - . ID=Thaps11576.1;Parent=Thaps11576;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 535466 537670 . + . ID=Thaps25653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY1];external_name=Thaps25653;logic_name=jgi_thaps3 chr20 ensembl transcript 535466 537670 . + . ID=Thaps25653;Parent=Thaps25653;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 535466 537670 . + 0 ID=Thaps25653;Parent=Thaps25653;rank=1 chr20 . exon 535466 537670 . + . ID=Thaps25653.1;Parent=Thaps25653;constitutive=1;rank=1 chr20 . repeat_region 550240 550268 . ? . description=trf chr20 . repeat_region 550240 550268 . ? . description=dust chr20 . repeat_region 550413 550424 . ? . description=dust chr20 ensembl protein_coding_gene 546798 549341 . + . ID=Thaps25655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY3];external_name=Thaps25655;logic_name=jgi_thaps3 chr20 ensembl transcript 546798 549341 . + . ID=Thaps25655;Parent=Thaps25655;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 546798 549341 . + 0 ID=Thaps25655;Parent=Thaps25655;rank=1 chr20 . exon 546798 549341 . + . ID=Thaps25655.1;Parent=Thaps25655;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 550751 552834 . + . ID=Thaps25656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY4];external_name=Thaps25656;logic_name=jgi_thaps3 chr20 ensembl transcript 550751 552834 . + . ID=Thaps25656;Parent=Thaps25656;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 550751 551079 . + 0 ID=Thaps25656;Parent=Thaps25656;rank=1 chr20 . exon 550751 551079 . + . ID=Thaps25656.1;Parent=Thaps25656;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 551277 551862 . + 0 ID=Thaps25656;Parent=Thaps25656;rank=2 chr20 . exon 551277 551862 . + . ID=Thaps25656.2;Parent=Thaps25656;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 551944 552112 . + 0 ID=Thaps25656;Parent=Thaps25656;rank=3 chr20 . exon 551944 552112 . + . ID=Thaps25656.3;Parent=Thaps25656;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 552219 552369 . + 0 ID=Thaps25656;Parent=Thaps25656;rank=4 chr20 . exon 552219 552369 . + . ID=Thaps25656.4;Parent=Thaps25656;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . CDS 552450 552834 . + 0 ID=Thaps25656;Parent=Thaps25656;rank=5 chr20 . exon 552450 552834 . + . ID=Thaps25656.5;Parent=Thaps25656;constitutive=1;ensembl_end_phase=1;rank=5 chr20 ensembl protein_coding_gene 544844 546562 . - . ID=Thaps270048;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY2];external_name=Thaps270048;logic_name=jgi_thaps3 chr20 ensembl transcript 544844 546562 . - . ID=Thaps270048;Parent=Thaps270048;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 544844 545691 . - 0 ID=Thaps270048;Parent=Thaps270048;rank=2 chr20 . exon 544844 545691 . - . ID=Thaps270048.2;Parent=Thaps270048;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 545782 546562 . - 0 ID=Thaps270048;Parent=Thaps270048;rank=1 chr20 . exon 545782 546562 . - . ID=Thaps270048.1;Parent=Thaps270048;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . repeat_region 558795 558970 . - . description=TE1A_TP chr20 . repeat_region 558965 559118 . - . description=TE1_TP chr20 ensembl protein_coding_gene 561808 563507 . + . ID=Thaps11585;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY9];external_name=Thaps11585;logic_name=jgi_thaps3 chr20 ensembl transcript 561808 563507 . + . ID=Thaps11585;Parent=Thaps11585;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 561808 562817 . + 0 ID=Thaps11585;Parent=Thaps11585;rank=1 chr20 . exon 561808 562817 . + . ID=Thaps11585.1;Parent=Thaps11585;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 562850 563507 . + 0 ID=Thaps11585;Parent=Thaps11585;rank=2 chr20 . exon 562850 563507 . + . ID=Thaps11585.2;Parent=Thaps11585;constitutive=1;ensembl_end_phase=1;rank=2 chr20 ensembl protein_coding_gene 554691 555485 . + . ID=Thaps17208;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY5];external_name=Thaps17208;logic_name=jgi_thaps3 chr20 ensembl transcript 554691 555485 . + . ID=Thaps17208;Parent=Thaps17208;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 554691 554927 . + 0 ID=Thaps17208;Parent=Thaps17208;rank=1 chr20 . exon 554691 554927 . + . ID=Thaps17208.1;Parent=Thaps17208;constitutive=1;rank=1 chr20 . CDS 555024 555082 . + 0 ID=Thaps17208;Parent=Thaps17208;rank=2 chr20 . exon 555024 555082 . + . ID=Thaps17208.2;Parent=Thaps17208;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 555161 555485 . + 0 ID=Thaps17208;Parent=Thaps17208;rank=3 chr20 . exon 555161 555485 . + . ID=Thaps17208.3;Parent=Thaps17208;constitutive=1;ensembl_end_phase=1;rank=3 chr20 ensembl protein_coding_gene 555901 557170 . - . ID=Thaps25658;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY6];external_name=Thaps25658;logic_name=jgi_thaps3 chr20 ensembl transcript 555901 557170 . - . ID=Thaps25658;Parent=Thaps25658;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 555901 556485 . - 0 ID=Thaps25658;Parent=Thaps25658;rank=2 chr20 . exon 555901 556485 . - . ID=Thaps25658.2;Parent=Thaps25658;constitutive=1;rank=2 chr20 . CDS 556583 557170 . - 0 ID=Thaps25658;Parent=Thaps25658;rank=1 chr20 . exon 556583 557170 . - . ID=Thaps25658.1;Parent=Thaps25658;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 557728 558495 . - . ID=Thaps25659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY7];external_name=Thaps25659;logic_name=jgi_thaps3 chr20 ensembl transcript 557728 558495 . - . ID=Thaps25659;Parent=Thaps25659;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 557728 558495 . - 0 ID=Thaps25659;Parent=Thaps25659;rank=1 chr20 . exon 557728 558495 . - . ID=Thaps25659.1;Parent=Thaps25659;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 559500 561494 . + . ID=Thaps25660;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEY8];external_name=Thaps25660;logic_name=jgi_thaps3 chr20 ensembl transcript 559500 561494 . + . ID=Thaps25660;Parent=Thaps25660;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 559500 561494 . + 0 ID=Thaps25660;Parent=Thaps25660;rank=1 chr20 . exon 559500 561494 . + . ID=Thaps25660.1;Parent=Thaps25660;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 563713 564408 . - . ID=Thaps11586;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ0];external_name=Thaps11586;logic_name=jgi_thaps3 chr20 ensembl transcript 563713 564408 . - . ID=Thaps11586;Parent=Thaps11586;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 563713 564408 . - 0 ID=Thaps11586;Parent=Thaps11586;rank=1 chr20 . exon 563713 564408 . - . ID=Thaps11586.1;Parent=Thaps11586;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 567183 569210 . - . ID=Thaps11588;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ2];external_name=Thaps11588;logic_name=jgi_thaps3 chr20 ensembl transcript 567183 569210 . - . ID=Thaps11588;Parent=Thaps11588;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 567183 569210 . - 0 ID=Thaps11588;Parent=Thaps11588;rank=1 chr20 . exon 567183 569210 . - . ID=Thaps11588.1;Parent=Thaps11588;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 570662 572563 . + . ID=Thaps11589;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ3];external_name=Thaps11589;logic_name=jgi_thaps3 chr20 ensembl transcript 570662 572563 . + . ID=Thaps11589;Parent=Thaps11589;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 570662 572563 . + 0 ID=Thaps11589;Parent=Thaps11589;rank=1 chr20 . exon 570662 572563 . + . ID=Thaps11589.1;Parent=Thaps11589;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 564845 566474 . + . ID=Thaps264722;biotype=protein_coding;description=Ras superfamily gtp-binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ1];external_name=Thaps264722;logic_name=jgi_thaps3 chr20 ensembl transcript 564845 566474 . + . ID=Thaps264722;Parent=Thaps264722;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 564845 564931 . + 0 ID=Thaps264722;Parent=Thaps264722;rank=1 chr20 . exon 564845 564931 . + . ID=Thaps264722.1;Parent=Thaps264722;constitutive=1;rank=1 chr20 . CDS 564981 565031 . + 0 ID=Thaps264722;Parent=Thaps264722;rank=2 chr20 . exon 564981 565031 . + . ID=Thaps264722.2;Parent=Thaps264722;constitutive=1;rank=2 chr20 . CDS 565376 565428 . + 0 ID=Thaps264722;Parent=Thaps264722;rank=3 chr20 . exon 565376 565428 . + . ID=Thaps264722.3;Parent=Thaps264722;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 565551 565561 . + 0 ID=Thaps264722;Parent=Thaps264722;rank=4 chr20 . exon 565551 565561 . + . ID=Thaps264722.4;Parent=Thaps264722;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 565707 565833 . + 0 ID=Thaps264722;Parent=Thaps264722;rank=5 chr20 . exon 565707 565833 . + . ID=Thaps264722.5;Parent=Thaps264722;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . CDS 565903 565972 . + 0 ID=Thaps264722;Parent=Thaps264722;rank=6 chr20 . exon 565903 565972 . + . ID=Thaps264722.6;Parent=Thaps264722;constitutive=1;ensembl_end_phase=1;rank=6 chr20 . CDS 566288 566474 . + 0 ID=Thaps264722;Parent=Thaps264722;rank=7 chr20 . exon 566288 566474 . + . ID=Thaps264722.7;Parent=Thaps264722;constitutive=1;ensembl_end_phase=1;rank=7 chr20 ensembl protein_coding_gene 573537 574775 . + . ID=Thaps11590;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ4];external_name=Thaps11590;logic_name=jgi_thaps3 chr20 ensembl transcript 573537 574775 . + . ID=Thaps11590;Parent=Thaps11590;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 573537 574775 . + 0 ID=Thaps11590;Parent=Thaps11590;rank=1 chr20 . exon 573537 574775 . + . ID=Thaps11590.1;Parent=Thaps11590;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 577142 578224 . + . ID=Thaps11592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ6];external_name=Thaps11592;logic_name=jgi_thaps3 chr20 ensembl transcript 577142 578224 . + . ID=Thaps11592;Parent=Thaps11592;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 577142 578224 . + 0 ID=Thaps11592;Parent=Thaps11592;rank=1 chr20 . exon 577142 578224 . + . ID=Thaps11592.1;Parent=Thaps11592;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 580096 582969 . - . ID=Thaps11594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ8];external_name=Thaps11594;logic_name=jgi_thaps3 chr20 ensembl transcript 580096 582969 . - . ID=Thaps11594;Parent=Thaps11594;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 580096 581619 . - 0 ID=Thaps11594;Parent=Thaps11594;rank=3 chr20 . exon 580096 581619 . - . ID=Thaps11594.3;Parent=Thaps11594;constitutive=1;rank=3 chr20 . CDS 581709 581957 . - 0 ID=Thaps11594;Parent=Thaps11594;rank=2 chr20 . exon 581709 581957 . - . ID=Thaps11594.2;Parent=Thaps11594;constitutive=1;rank=2 chr20 . CDS 582043 582969 . - 0 ID=Thaps11594;Parent=Thaps11594;rank=1 chr20 . exon 582043 582969 . - . ID=Thaps11594.1;Parent=Thaps11594;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 578870 579802 . - . ID=Thaps15545;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ7];external_name=Thaps15545;logic_name=jgi_thaps3 chr20 ensembl transcript 578870 579802 . - . ID=Thaps15545;Parent=Thaps15545;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 578870 579144 . - 0 ID=Thaps15545;Parent=Thaps15545;rank=2 chr20 . exon 578870 579144 . - . ID=Thaps15545.2;Parent=Thaps15545;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 579235 579802 . - 0 ID=Thaps15545;Parent=Thaps15545;rank=1 chr20 . exon 579235 579802 . - . ID=Thaps15545.1;Parent=Thaps15545;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 575715 575963 . - . ID=Thaps38514;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ5];external_name=Thaps38514;logic_name=jgi_thaps3 chr20 ensembl transcript 575715 575963 . - . ID=Thaps38514;Parent=Thaps38514;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 575715 575963 . - 0 ID=Thaps38514;Parent=Thaps38514;rank=1 chr20 . exon 575715 575963 . - . ID=Thaps38514.1;Parent=Thaps38514;constitutive=1;rank=1 chr20 . repeat_region 583003 583012 . ? . description=dust chr20 . repeat_region 587306 587366 . ? . description=dust chr20 . repeat_region 591173 591190 . ? . description=dust chr20 . repeat_region 591179 592228 . - . description=RTE1_TP chr20 . repeat_region 592228 594236 . - . description=RTE1_TP chr20 ensembl protein_coding_gene 584934 586248 . - . ID=Thaps14364;biotype=protein_coding;description=Phosphatidate cytidylytransferase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CEZ9];external_name=Thaps14364;logic_name=jgi_thaps3 chr20 ensembl transcript 584934 586248 . - . ID=Thaps14364;Parent=Thaps14364;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 584934 585084 . - 0 ID=Thaps14364;Parent=Thaps14364;rank=3 chr20 . exon 584934 585084 . - . ID=Thaps14364.3;Parent=Thaps14364;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 585176 585339 . - 0 ID=Thaps14364;Parent=Thaps14364;rank=2 chr20 . exon 585176 585339 . - . ID=Thaps14364.2;Parent=Thaps14364;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 585427 586248 . - 0 ID=Thaps14364;Parent=Thaps14364;rank=1 chr20 . exon 585427 586248 . - . ID=Thaps14364.1;Parent=Thaps14364;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 587427 587849 . + . ID=Thaps25662;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF00];external_name=Thaps25662;logic_name=jgi_thaps3 chr20 ensembl transcript 587427 587849 . + . ID=Thaps25662;Parent=Thaps25662;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 587427 587561 . + 0 ID=Thaps25662;Parent=Thaps25662;rank=1 chr20 . exon 587427 587561 . + . ID=Thaps25662.1;Parent=Thaps25662;constitutive=1;rank=1 chr20 . CDS 587643 587849 . + 0 ID=Thaps25662;Parent=Thaps25662;rank=2 chr20 . exon 587643 587849 . + . ID=Thaps25662.2;Parent=Thaps25662;constitutive=1;rank=2 chr20 ensembl protein_coding_gene 589743 590561 . - . ID=Thaps38391;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF01];external_name=Thaps38391;logic_name=jgi_thaps3 chr20 ensembl transcript 589743 590561 . - . ID=Thaps38391;Parent=Thaps38391;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 589743 590561 . - 0 ID=Thaps38391;Parent=Thaps38391;rank=1 chr20 . exon 589743 590561 . - . ID=Thaps38391.1;Parent=Thaps38391;constitutive=1;rank=1 chr20 . repeat_region 599032 599072 . ? . description=trf chr20 ensembl protein_coding_gene 598005 599348 . + . ID=Thaps11598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF03];external_name=Thaps11598;logic_name=jgi_thaps3 chr20 ensembl transcript 598005 599348 . + . ID=Thaps11598;Parent=Thaps11598;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 598005 599348 . + 0 ID=Thaps11598;Parent=Thaps11598;rank=1 chr20 . exon 598005 599348 . + . ID=Thaps11598.1;Parent=Thaps11598;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 599581 600870 . - . ID=Thaps25663;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF04];external_name=Thaps25663;logic_name=jgi_thaps3 chr20 ensembl transcript 599581 600870 . - . ID=Thaps25663;Parent=Thaps25663;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 599581 600870 . - 0 ID=Thaps25663;Parent=Thaps25663;rank=1 chr20 . exon 599581 600870 . - . ID=Thaps25663.1;Parent=Thaps25663;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 595246 595511 . - . ID=Thaps264725;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF02];external_name=Thaps264725;logic_name=jgi_thaps3 chr20 ensembl transcript 595246 595511 . - . ID=Thaps264725;Parent=Thaps264725;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 595246 595511 . - 0 ID=Thaps264725;Parent=Thaps264725;rank=1 chr20 . exon 595246 595511 . - . ID=Thaps264725.1;Parent=Thaps264725;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 601218 601606 . - . ID=Thaps264726;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF05];external_name=Thaps264726;logic_name=jgi_thaps3 chr20 ensembl transcript 601218 601606 . - . ID=Thaps264726;Parent=Thaps264726;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 601218 601606 . - 0 ID=Thaps264726;Parent=Thaps264726;rank=1 chr20 . exon 601218 601606 . - . ID=Thaps264726.1;Parent=Thaps264726;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 602666 603283 . - . ID=Thaps264727;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF06];external_name=Thaps264727;logic_name=jgi_thaps3 chr20 ensembl transcript 602666 603283 . - . ID=Thaps264727;Parent=Thaps264727;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 602666 603283 . - 0 ID=Thaps264727;Parent=Thaps264727;rank=1 chr20 . exon 602666 603283 . - . ID=Thaps264727.1;Parent=Thaps264727;constitutive=1;rank=1 chr20 . repeat_region 605350 605372 . ? . description=dust chr20 ensembl protein_coding_gene 606221 607675 . - . ID=Thaps25664;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF07];external_name=Thaps25664;logic_name=jgi_thaps3 chr20 ensembl transcript 606221 607675 . - . ID=Thaps25664;Parent=Thaps25664;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 606221 607675 . - 0 ID=Thaps25664;Parent=Thaps25664;rank=1 chr20 . exon 606221 607675 . - . ID=Thaps25664.1;Parent=Thaps25664;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 611427 611650 . + . ID=Thaps264728;biotype=protein_coding;description=Dynein light chain [Source:UniProtKB/TrEMBL%3BAcc:B8CF09];external_name=Thaps264728;logic_name=jgi_thaps3 chr20 ensembl transcript 611427 611650 . + . ID=Thaps264728;Parent=Thaps264728;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 611427 611650 . + 0 ID=Thaps264728;Parent=Thaps264728;rank=1 chr20 . exon 611427 611650 . + . ID=Thaps264728.1;Parent=Thaps264728;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 608938 609628 . + . ID=Thaps38509;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF08];external_name=Thaps38509;logic_name=jgi_thaps3 chr20 ensembl transcript 608938 609628 . + . ID=Thaps38509;Parent=Thaps38509;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 608938 609128 . + 0 ID=Thaps38509;Parent=Thaps38509;rank=1 chr20 . exon 608938 609128 . + . ID=Thaps38509.1;Parent=Thaps38509;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 609219 609446 . + 0 ID=Thaps38509;Parent=Thaps38509;rank=2 chr20 . exon 609219 609446 . + . ID=Thaps38509.2;Parent=Thaps38509;constitutive=1;rank=2 chr20 . CDS 609568 609628 . + 0 ID=Thaps38509;Parent=Thaps38509;rank=3 chr20 . exon 609568 609628 . + . ID=Thaps38509.3;Parent=Thaps38509;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . repeat_region 616303 616330 . ? . description=trf chr20 . repeat_region 618025 618060 . ? . description=trf chr20 . repeat_region 620491 620543 . ? . description=trf chr20 ensembl protein_coding_gene 620478 621397 . + . ID=Thaps11604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF10];external_name=Thaps11604;logic_name=jgi_thaps3 chr20 ensembl transcript 620478 621397 . + . ID=Thaps11604;Parent=Thaps11604;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 620478 621207 . + 0 ID=Thaps11604;Parent=Thaps11604;rank=1 chr20 . exon 620478 621207 . + . ID=Thaps11604.1;Parent=Thaps11604;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 621315 621397 . + 0 ID=Thaps11604;Parent=Thaps11604;rank=2 chr20 . exon 621315 621397 . + . ID=Thaps11604.2;Parent=Thaps11604;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . repeat_region 621619 635257 . ? . description=dust chr20 . repeat_region 640734 640772 . ? . description=trf chr20 ensembl protein_coding_gene 641052 643589 . + . ID=Thaps11606;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF13];external_name=Thaps11606;logic_name=jgi_thaps3 chr20 ensembl transcript 641052 643589 . + . ID=Thaps11606;Parent=Thaps11606;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 641052 643589 . + 0 ID=Thaps11606;Parent=Thaps11606;rank=1 chr20 . exon 641052 643589 . + . ID=Thaps11606.1;Parent=Thaps11606;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 637585 637824 . + . ID=Thaps19813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF11];external_name=Thaps19813;logic_name=jgi_thaps3 chr20 ensembl transcript 637585 637824 . + . ID=Thaps19813;Parent=Thaps19813;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 637585 637824 . + 0 ID=Thaps19813;Parent=Thaps19813;rank=1 chr20 . exon 637585 637824 . + . ID=Thaps19813.1;Parent=Thaps19813;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 638194 639031 . + . ID=Thaps264730;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF12];external_name=Thaps264730;logic_name=jgi_thaps3 chr20 ensembl transcript 638194 639031 . + . ID=Thaps264730;Parent=Thaps264730;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 638194 638343 . + 0 ID=Thaps264730;Parent=Thaps264730;rank=1 chr20 . exon 638194 638343 . + . ID=Thaps264730.1;Parent=Thaps264730;constitutive=1;rank=1 chr20 . CDS 638420 638461 . + 0 ID=Thaps264730;Parent=Thaps264730;rank=2 chr20 . exon 638420 638461 . + . ID=Thaps264730.2;Parent=Thaps264730;constitutive=1;rank=2 chr20 . CDS 638526 638725 . + 0 ID=Thaps264730;Parent=Thaps264730;rank=3 chr20 . exon 638526 638725 . + . ID=Thaps264730.3;Parent=Thaps264730;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 638805 638815 . + 0 ID=Thaps264730;Parent=Thaps264730;rank=4 chr20 . exon 638805 638815 . + . ID=Thaps264730.4;Parent=Thaps264730;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 638910 639031 . + 0 ID=Thaps264730;Parent=Thaps264730;rank=5 chr20 . exon 638910 639031 . + . ID=Thaps264730.5;Parent=Thaps264730;constitutive=1;ensembl_end_phase=2;rank=5 chr20 . repeat_region 650882 651145 . - . description=TE2c_TP chr20 . repeat_region 650891 651175 . + . description=Harbinger4_TP chr20 ensembl protein_coding_gene 648993 650510 . - . ID=Thaps11609;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF16];external_name=Thaps11609;logic_name=jgi_thaps3 chr20 ensembl transcript 648993 650510 . - . ID=Thaps11609;Parent=Thaps11609;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 648993 650510 . - 0 ID=Thaps11609;Parent=Thaps11609;rank=1 chr20 . exon 648993 650510 . - . ID=Thaps11609.1;Parent=Thaps11609;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 643791 646943 . - . ID=Thaps12662;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF14];external_name=Thaps12662;logic_name=jgi_thaps3 chr20 ensembl transcript 643791 646943 . - . ID=Thaps12662;Parent=Thaps12662;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 643791 644522 . - 0 ID=Thaps12662;Parent=Thaps12662;rank=6 chr20 . exon 643791 644522 . - . ID=Thaps12662.6;Parent=Thaps12662;constitutive=1;rank=6 chr20 . CDS 644571 644916 . - 0 ID=Thaps12662;Parent=Thaps12662;rank=5 chr20 . exon 644571 644916 . - . ID=Thaps12662.5;Parent=Thaps12662;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . CDS 644995 645260 . - 0 ID=Thaps12662;Parent=Thaps12662;rank=4 chr20 . exon 644995 645260 . - . ID=Thaps12662.4;Parent=Thaps12662;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 645369 645652 . - 0 ID=Thaps12662;Parent=Thaps12662;rank=3 chr20 . exon 645369 645652 . - . ID=Thaps12662.3;Parent=Thaps12662;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 645845 646700 . - 0 ID=Thaps12662;Parent=Thaps12662;rank=2 chr20 . exon 645845 646700 . - . ID=Thaps12662.2;Parent=Thaps12662;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 646806 646943 . - 0 ID=Thaps12662;Parent=Thaps12662;rank=1 chr20 . exon 646806 646943 . - . ID=Thaps12662.1;Parent=Thaps12662;constitutive=1;rank=1 chr20 ensembl gene 651850 652779 . - . ID=Thaps264732;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr20 ensembl transcript 651850 652779 . - . ID=Thaps264732;Parent=Thaps264732;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr20 . exon 651850 652085 . - . ID=Thaps264732.5;Parent=Thaps264732;constitutive=1;ensembl_end_phase=2;rank=5 chr20 ensembl protein_coding_gene 647815 648860 . + . ID=Thaps30620;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF15];external_name=Thaps30620;logic_name=jgi_thaps3 chr20 ensembl transcript 647815 648860 . + . ID=Thaps30620;Parent=Thaps30620;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 647815 648329 . + 0 ID=Thaps30620;Parent=Thaps30620;rank=1 chr20 . exon 647815 648329 . + . ID=Thaps30620.1;Parent=Thaps30620;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 648410 648860 . + 0 ID=Thaps30620;Parent=Thaps30620;rank=2 chr20 . exon 648410 648860 . + . ID=Thaps30620.2;Parent=Thaps30620;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . repeat_region 653272 653279 . ? . description=dust chr20 . repeat_region 656224 656256 . ? . description=trf chr20 ensembl protein_coding_gene 657290 662225 . - . ID=Thaps11612;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF18];external_name=Thaps11612;logic_name=jgi_thaps3 chr20 ensembl transcript 657290 662225 . - . ID=Thaps11612;Parent=Thaps11612;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 657290 657394 . - 0 ID=Thaps11612;Parent=Thaps11612;rank=5 chr20 . exon 657290 657394 . - . ID=Thaps11612.5;Parent=Thaps11612;constitutive=1;rank=5 chr20 . CDS 657633 658378 . - 0 ID=Thaps11612;Parent=Thaps11612;rank=4 chr20 . exon 657633 658378 . - . ID=Thaps11612.4;Parent=Thaps11612;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 658425 658567 . - 0 ID=Thaps11612;Parent=Thaps11612;rank=3 chr20 . exon 658425 658567 . - . ID=Thaps11612.3;Parent=Thaps11612;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 658732 661084 . - 0 ID=Thaps11612;Parent=Thaps11612;rank=2 chr20 . exon 658732 661084 . - . ID=Thaps11612.2;Parent=Thaps11612;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 661241 662225 . - 0 ID=Thaps11612;Parent=Thaps11612;rank=1 chr20 . exon 661241 662225 . - . ID=Thaps11612.1;Parent=Thaps11612;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 653553 655989 . + . ID=Thaps25669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF17];external_name=Thaps25669;logic_name=jgi_thaps3 chr20 ensembl transcript 653553 655989 . + . ID=Thaps25669;Parent=Thaps25669;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 653553 654082 . + 0 ID=Thaps25669;Parent=Thaps25669;rank=1 chr20 . exon 653553 654082 . + . ID=Thaps25669.1;Parent=Thaps25669;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 654230 655081 . + 0 ID=Thaps25669;Parent=Thaps25669;rank=2 chr20 . exon 654230 655081 . + . ID=Thaps25669.2;Parent=Thaps25669;constitutive=1;rank=2 chr20 . CDS 655157 655297 . + 0 ID=Thaps25669;Parent=Thaps25669;rank=3 chr20 . exon 655157 655297 . + . ID=Thaps25669.3;Parent=Thaps25669;constitutive=1;rank=3 chr20 . CDS 655377 655989 . + 0 ID=Thaps25669;Parent=Thaps25669;rank=4 chr20 . exon 655377 655989 . + . ID=Thaps25669.4;Parent=Thaps25669;constitutive=1;ensembl_end_phase=1;rank=4 chr20 . exon 652170 652247 . - . ID=Thaps264732.4;Parent=Thaps264732;constitutive=1;rank=4 chr20 . exon 652296 652493 . - . ID=Thaps264732.3;Parent=Thaps264732;constitutive=1;rank=3 chr20 . exon 652522 652578 . - . ID=Thaps264732.2;Parent=Thaps264732;constitutive=1;rank=2 chr20 . exon 652660 652779 . - . ID=Thaps264732.1;Parent=Thaps264732;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 663514 667418 . - . ID=Thaps11613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF19];external_name=Thaps11613;logic_name=jgi_thaps3 chr20 ensembl transcript 663514 667418 . - . ID=Thaps11613;Parent=Thaps11613;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 663514 664278 . - 0 ID=Thaps11613;Parent=Thaps11613;rank=3 chr20 . exon 663514 664278 . - . ID=Thaps11613.3;Parent=Thaps11613;constitutive=1;rank=3 chr20 . CDS 664362 667145 . - 0 ID=Thaps11613;Parent=Thaps11613;rank=2 chr20 . exon 664362 667145 . - . ID=Thaps11613.2;Parent=Thaps11613;constitutive=1;rank=2 chr20 . CDS 667362 667418 . - 0 ID=Thaps11613;Parent=Thaps11613;rank=1 chr20 . exon 667362 667418 . - . ID=Thaps11613.1;Parent=Thaps11613;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 667947 668912 . - . ID=Thaps11614;biotype=protein_coding;description=ATP binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF20];external_name=Thaps11614;logic_name=jgi_thaps3 chr20 ensembl transcript 667947 668912 . - . ID=Thaps11614;Parent=Thaps11614;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 667947 668164 . - 0 ID=Thaps11614;Parent=Thaps11614;rank=3 chr20 . exon 667947 668164 . - . ID=Thaps11614.3;Parent=Thaps11614;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 668274 668274 . - 0 ID=Thaps11614;Parent=Thaps11614;rank=2 chr20 . exon 668274 668274 . - . ID=Thaps11614.2;Parent=Thaps11614;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 668346 668912 . - 0 ID=Thaps11614;Parent=Thaps11614;rank=1 chr20 . exon 668346 668912 . - . ID=Thaps11614.1;Parent=Thaps11614;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 669124 671673 . + . ID=Thaps11615;biotype=protein_coding;description=Peroxidase/catalase [Source:UniProtKB/TrEMBL%3BAcc:B8CF21];external_name=Thaps11615;logic_name=jgi_thaps3 chr20 ensembl transcript 669124 671673 . + . ID=Thaps11615;Parent=Thaps11615;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 669124 669250 . + 0 ID=Thaps11615;Parent=Thaps11615;rank=1 chr20 . exon 669124 669250 . + . ID=Thaps11615.1;Parent=Thaps11615;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 669332 669479 . + 0 ID=Thaps11615;Parent=Thaps11615;rank=2 chr20 . exon 669332 669479 . + . ID=Thaps11615.2;Parent=Thaps11615;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 669574 669742 . + 0 ID=Thaps11615;Parent=Thaps11615;rank=3 chr20 . exon 669574 669742 . + . ID=Thaps11615.3;Parent=Thaps11615;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 669812 670006 . + 0 ID=Thaps11615;Parent=Thaps11615;rank=4 chr20 . exon 669812 670006 . + . ID=Thaps11615.4;Parent=Thaps11615;constitutive=1;rank=4 chr20 . CDS 670105 671673 . + 0 ID=Thaps11615;Parent=Thaps11615;rank=5 chr20 . exon 670105 671673 . + . ID=Thaps11615.5;Parent=Thaps11615;constitutive=1;rank=5 chr20 . repeat_region 674252 674299 . ? . description=dust chr20 . repeat_region 676814 676851 . ? . description=dust chr20 ensembl protein_coding_gene 671901 672359 . + . ID=Thaps11616;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF22];external_name=Thaps11616;logic_name=jgi_thaps3 chr20 ensembl transcript 671901 672359 . + . ID=Thaps11616;Parent=Thaps11616;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 671901 672359 . + 0 ID=Thaps11616;Parent=Thaps11616;rank=1 chr20 . exon 671901 672359 . + . ID=Thaps11616.1;Parent=Thaps11616;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 672652 674007 . - . ID=Thaps11617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF23];external_name=Thaps11617;logic_name=jgi_thaps3 chr20 ensembl transcript 672652 674007 . - . ID=Thaps11617;Parent=Thaps11617;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 672652 674007 . - 0 ID=Thaps11617;Parent=Thaps11617;rank=1 chr20 . exon 672652 674007 . - . ID=Thaps11617.1;Parent=Thaps11617;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 674395 675812 . + . ID=Thaps11618;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF24];external_name=Thaps11618;logic_name=jgi_thaps3 chr20 ensembl transcript 674395 675812 . + . ID=Thaps11618;Parent=Thaps11618;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 674395 674651 . + 0 ID=Thaps11618;Parent=Thaps11618;rank=1 chr20 . exon 674395 674651 . + . ID=Thaps11618.1;Parent=Thaps11618;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 674750 675812 . + 0 ID=Thaps11618;Parent=Thaps11618;rank=2 chr20 . exon 674750 675812 . + . ID=Thaps11618.2;Parent=Thaps11618;constitutive=1;ensembl_end_phase=1;rank=2 chr20 ensembl protein_coding_gene 680091 680657 . - . ID=Thaps11621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF27];external_name=Thaps11621;logic_name=jgi_thaps3 chr20 ensembl transcript 680091 680657 . - . ID=Thaps11621;Parent=Thaps11621;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 680091 680657 . - 0 ID=Thaps11621;Parent=Thaps11621;rank=1 chr20 . exon 680091 680657 . - . ID=Thaps11621.1;Parent=Thaps11621;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 677557 679800 . + . ID=Thaps25671;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF26];external_name=Thaps25671;logic_name=jgi_thaps3 chr20 ensembl transcript 677557 679800 . + . ID=Thaps25671;Parent=Thaps25671;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 677557 679800 . + 0 ID=Thaps25671;Parent=Thaps25671;rank=1 chr20 . exon 677557 679800 . + . ID=Thaps25671.1;Parent=Thaps25671;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 676292 676669 . + . ID=Thaps38543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF25];external_name=Thaps38543;logic_name=jgi_thaps3 chr20 ensembl transcript 676292 676669 . + . ID=Thaps38543;Parent=Thaps38543;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 676292 676669 . + 0 ID=Thaps38543;Parent=Thaps38543;rank=1 chr20 . exon 676292 676669 . + . ID=Thaps38543.1;Parent=Thaps38543;constitutive=1;rank=1 chr20 . repeat_region 684320 684455 . ? . description=trf chr20 . repeat_region 684642 685105 . + . description=Gypsy3LTR_TP chr20 . repeat_region 688049 688096 . ? . description=trf chr20 . repeat_region 688323 688344 . ? . description=trf chr20 ensembl protein_coding_gene 682013 683458 . - . ID=Thaps11622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF28];external_name=Thaps11622;logic_name=jgi_thaps3 chr20 ensembl transcript 682013 683458 . - . ID=Thaps11622;Parent=Thaps11622;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 682013 683458 . - 0 ID=Thaps11622;Parent=Thaps11622;rank=1 chr20 . exon 682013 683458 . - . ID=Thaps11622.1;Parent=Thaps11622;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 685378 685960 . + . ID=Thaps11623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF29];external_name=Thaps11623;logic_name=jgi_thaps3 chr20 ensembl transcript 685378 685960 . + . ID=Thaps11623;Parent=Thaps11623;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 685378 685649 . + 0 ID=Thaps11623;Parent=Thaps11623;rank=1 chr20 . exon 685378 685649 . + . ID=Thaps11623.1;Parent=Thaps11623;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 685924 685960 . + 0 ID=Thaps11623;Parent=Thaps11623;rank=2 chr20 . exon 685924 685960 . + . ID=Thaps11623.2;Parent=Thaps11623;constitutive=1;ensembl_end_phase=1;rank=2 chr20 ensembl protein_coding_gene 686287 688896 . + . ID=Thaps11624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF30];external_name=Thaps11624;logic_name=jgi_thaps3 chr20 ensembl transcript 686287 688896 . + . ID=Thaps11624;Parent=Thaps11624;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 686287 686626 . + 0 ID=Thaps11624;Parent=Thaps11624;rank=1 chr20 . exon 686287 686626 . + . ID=Thaps11624.1;Parent=Thaps11624;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 686910 688676 . + 0 ID=Thaps11624;Parent=Thaps11624;rank=2 chr20 . exon 686910 688676 . + . ID=Thaps11624.2;Parent=Thaps11624;constitutive=1;rank=2 chr20 . CDS 688772 688896 . + 0 ID=Thaps11624;Parent=Thaps11624;rank=3 chr20 . exon 688772 688896 . + . ID=Thaps11624.3;Parent=Thaps11624;constitutive=1;ensembl_end_phase=2;rank=3 chr20 ensembl protein_coding_gene 690908 692262 . + . ID=Thaps264740;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CF31];external_name=Thaps264740;logic_name=jgi_thaps3 chr20 ensembl transcript 690908 692262 . + . ID=Thaps264740;Parent=Thaps264740;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 690908 691236 . + 0 ID=Thaps264740;Parent=Thaps264740;rank=1 chr20 . exon 690908 691236 . + . ID=Thaps264740.1;Parent=Thaps264740;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 691325 691796 . + 0 ID=Thaps264740;Parent=Thaps264740;rank=2 chr20 . exon 691325 691796 . + . ID=Thaps264740.2;Parent=Thaps264740;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 691878 692130 . + 0 ID=Thaps264740;Parent=Thaps264740;rank=3 chr20 . CDS 692149 692262 . + 0 ID=Thaps264740;Parent=Thaps264740;rank=4 chr20 . repeat_region 700862 700912 . ? . description=dust chr20 ensembl protein_coding_gene 697996 699263 . + . ID=Thaps11626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF33];external_name=Thaps11626;logic_name=jgi_thaps3 chr20 ensembl transcript 697996 699263 . + . ID=Thaps11626;Parent=Thaps11626;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 697996 698363 . + 0 ID=Thaps11626;Parent=Thaps11626;rank=1 chr20 . exon 697996 698363 . + . ID=Thaps11626.1;Parent=Thaps11626;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 698486 699263 . + 0 ID=Thaps11626;Parent=Thaps11626;rank=2 chr20 . exon 698486 699263 . + . ID=Thaps11626.2;Parent=Thaps11626;constitutive=1;ensembl_end_phase=1;rank=2 chr20 ensembl protein_coding_gene 700445 701814 . + . ID=Thaps11627;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF34];external_name=Thaps11627;logic_name=jgi_thaps3 chr20 ensembl transcript 700445 701814 . + . ID=Thaps11627;Parent=Thaps11627;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 700445 701118 . + 0 ID=Thaps11627;Parent=Thaps11627;rank=1 chr20 . exon 700445 701118 . + . ID=Thaps11627.1;Parent=Thaps11627;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 701256 701814 . + 0 ID=Thaps11627;Parent=Thaps11627;rank=2 chr20 . exon 701256 701814 . + . ID=Thaps11627.2;Parent=Thaps11627;constitutive=1;ensembl_end_phase=1;rank=2 chr20 ensembl protein_coding_gene 694316 695042 . + . ID=Thaps16722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF32];external_name=Thaps16722;logic_name=jgi_thaps3 chr20 ensembl transcript 694316 695042 . + . ID=Thaps16722;Parent=Thaps16722;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 694316 694500 . + 0 ID=Thaps16722;Parent=Thaps16722;rank=1 chr20 . exon 694316 694500 . + . ID=Thaps16722.1;Parent=Thaps16722;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 694572 694675 . + 0 ID=Thaps16722;Parent=Thaps16722;rank=2 chr20 . exon 694572 694675 . + . ID=Thaps16722.2;Parent=Thaps16722;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 694741 695042 . + 0 ID=Thaps16722;Parent=Thaps16722;rank=3 chr20 . exon 694741 695042 . + . ID=Thaps16722.3;Parent=Thaps16722;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . exon 691878 692130 . + . ID=Thaps264740.3;Parent=Thaps264740;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . exon 692149 692262 . + . ID=Thaps264740.4;Parent=Thaps264740;constitutive=1;rank=4 chr20 . repeat_region 702254 702290 . ? . description=trf chr20 ensembl protein_coding_gene 703112 704575 . - . ID=Thaps11628;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF35];external_name=Thaps11628;logic_name=jgi_thaps3 chr20 ensembl transcript 703112 704575 . - . ID=Thaps11628;Parent=Thaps11628;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 703112 704575 . - 0 ID=Thaps11628;Parent=Thaps11628;rank=1 chr20 . exon 703112 704575 . - . ID=Thaps11628.1;Parent=Thaps11628;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 704944 705498 . - . ID=Thaps11629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF36];external_name=Thaps11629;logic_name=jgi_thaps3 chr20 ensembl transcript 704944 705498 . - . ID=Thaps11629;Parent=Thaps11629;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 704944 705498 . - 0 ID=Thaps11629;Parent=Thaps11629;rank=1 chr20 . exon 704944 705498 . - . ID=Thaps11629.1;Parent=Thaps11629;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 706270 707020 . - . ID=Thaps38428;biotype=protein_coding;description=Mitochondrial alternative oxidase [Source:UniProtKB/TrEMBL%3BAcc:B8CF37];external_name=AOX1_2;logic_name=jgi_thaps3 chr20 ensembl transcript 706270 707020 . - . ID=Thaps38428;Parent=Thaps38428;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 706270 706817 . - 0 ID=Thaps38428;Parent=Thaps38428;rank=2 chr20 . exon 706270 706817 . - . ID=Thaps38428.2;Parent=Thaps38428;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 706888 707020 . - 0 ID=Thaps38428;Parent=Thaps38428;rank=1 chr20 . exon 706888 707020 . - . ID=Thaps38428.1;Parent=Thaps38428;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 709547 710418 . + . ID=Thaps42992;biotype=protein_coding;description=Mitochondrial alternative oxidase [Source:UniProtKB/TrEMBL%3BAcc:B8CF38];external_name=AOX2;logic_name=jgi_thaps3 chr20 ensembl transcript 709547 710418 . + . ID=Thaps42992;Parent=Thaps42992;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 709547 709679 . + 0 ID=Thaps42992;Parent=Thaps42992;rank=1 chr20 . exon 709547 709679 . + . ID=Thaps42992.1;Parent=Thaps42992;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 709757 710418 . + 0 ID=Thaps42992;Parent=Thaps42992;rank=2 chr20 . exon 709757 710418 . + . ID=Thaps42992.2;Parent=Thaps42992;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . repeat_region 714790 714876 . - . description=scaffold_12_77_7_178603_181062 chr20 . repeat_region 715787 716550 . - . description=scaffold_12_77_7_178603_181062 chr20 . repeat_region 720158 720538 . + . description=MuDR1_TP chr20 . repeat_region 720244 720263 . ? . description=dust chr20 . repeat_region 720533 724428 . + . description=MuDR1_TP chr20 . repeat_region 721146 721174 . ? . description=dust chr20 ensembl protein_coding_gene 711388 711885 . + . ID=Thaps11632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF39];external_name=Thaps11632;logic_name=jgi_thaps3 chr20 ensembl transcript 711388 711885 . + . ID=Thaps11632;Parent=Thaps11632;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 711388 711885 . + 0 ID=Thaps11632;Parent=Thaps11632;rank=1 chr20 . exon 711388 711885 . + . ID=Thaps11632.1;Parent=Thaps11632;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 713072 713659 . - . ID=Thaps11633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF40];external_name=Thaps11633;logic_name=jgi_thaps3 chr20 ensembl transcript 713072 713659 . - . ID=Thaps11633;Parent=Thaps11633;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 713072 713659 . - 0 ID=Thaps11633;Parent=Thaps11633;rank=1 chr20 . exon 713072 713659 . - . ID=Thaps11633.1;Parent=Thaps11633;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 718390 719424 . - . ID=Thaps25675;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF41];external_name=Thaps25675;logic_name=jgi_thaps3 chr20 ensembl transcript 718390 719424 . - . ID=Thaps25675;Parent=Thaps25675;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 718390 719424 . - 0 ID=Thaps25675;Parent=Thaps25675;rank=1 chr20 . exon 718390 719424 . - . ID=Thaps25675.1;Parent=Thaps25675;constitutive=1;rank=1 chr20 . repeat_region 723574 723627 . ? . description=trf chr20 ensembl protein_coding_gene 724527 727190 . - . ID=Thaps11636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF42];external_name=Thaps11636;logic_name=jgi_thaps3 chr20 ensembl transcript 724527 727190 . - . ID=Thaps11636;Parent=Thaps11636;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 724527 724806 . - 0 ID=Thaps11636;Parent=Thaps11636;rank=9 chr20 . exon 724527 724806 . - . ID=Thaps11636.9;Parent=Thaps11636;constitutive=1;ensembl_end_phase=1;rank=9 chr20 . CDS 724894 725038 . - 0 ID=Thaps11636;Parent=Thaps11636;rank=8 chr20 . exon 724894 725038 . - . ID=Thaps11636.8;Parent=Thaps11636;constitutive=1;ensembl_end_phase=1;rank=8 chr20 . CDS 725116 725266 . - 0 ID=Thaps11636;Parent=Thaps11636;rank=7 chr20 . exon 725116 725266 . - . ID=Thaps11636.7;Parent=Thaps11636;constitutive=1;ensembl_end_phase=1;rank=7 chr20 . CDS 725327 725460 . - 0 ID=Thaps11636;Parent=Thaps11636;rank=6 chr20 . exon 725327 725460 . - . ID=Thaps11636.6;Parent=Thaps11636;constitutive=1;ensembl_end_phase=2;rank=6 chr20 . CDS 725547 725661 . - 0 ID=Thaps11636;Parent=Thaps11636;rank=5 chr20 . exon 725547 725661 . - . ID=Thaps11636.5;Parent=Thaps11636;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . CDS 725796 726028 . - 0 ID=Thaps11636;Parent=Thaps11636;rank=4 chr20 . exon 725796 726028 . - . ID=Thaps11636.4;Parent=Thaps11636;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 726086 726318 . - 0 ID=Thaps11636;Parent=Thaps11636;rank=3 chr20 . exon 726086 726318 . - . ID=Thaps11636.3;Parent=Thaps11636;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 726389 726756 . - 0 ID=Thaps11636;Parent=Thaps11636;rank=2 chr20 . exon 726389 726756 . - . ID=Thaps11636.2;Parent=Thaps11636;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 726864 727190 . - 0 ID=Thaps11636;Parent=Thaps11636;rank=1 chr20 . exon 726864 727190 . - . ID=Thaps11636.1;Parent=Thaps11636;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 727849 729860 . - . ID=Thaps11637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF43];external_name=Thaps11637;logic_name=jgi_thaps3 chr20 ensembl transcript 727849 729860 . - . ID=Thaps11637;Parent=Thaps11637;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 727849 728177 . - 0 ID=Thaps11637;Parent=Thaps11637;rank=4 chr20 . exon 727849 728177 . - . ID=Thaps11637.4;Parent=Thaps11637;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 728269 728981 . - 0 ID=Thaps11637;Parent=Thaps11637;rank=3 chr20 . exon 728269 728981 . - . ID=Thaps11637.3;Parent=Thaps11637;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 729138 729264 . - 0 ID=Thaps11637;Parent=Thaps11637;rank=2 chr20 . exon 729138 729264 . - . ID=Thaps11637.2;Parent=Thaps11637;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 729395 729860 . - 0 ID=Thaps11637;Parent=Thaps11637;rank=1 chr20 . exon 729395 729860 . - . ID=Thaps11637.1;Parent=Thaps11637;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . repeat_region 739768 739777 . ? . description=dust chr20 . repeat_region 740100 740107 . ? . description=dust chr20 ensembl protein_coding_gene 734635 736089 . - . ID=Thaps11639;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF45];external_name=Thaps11639;logic_name=jgi_thaps3 chr20 ensembl transcript 734635 736089 . - . ID=Thaps11639;Parent=Thaps11639;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 734635 734954 . - 0 ID=Thaps11639;Parent=Thaps11639;rank=3 chr20 . exon 734635 734954 . - . ID=Thaps11639.3;Parent=Thaps11639;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 735039 735605 . - 0 ID=Thaps11639;Parent=Thaps11639;rank=2 chr20 . exon 735039 735605 . - . ID=Thaps11639.2;Parent=Thaps11639;constitutive=1;rank=2 chr20 . CDS 735684 736089 . - 0 ID=Thaps11639;Parent=Thaps11639;rank=1 chr20 . exon 735684 736089 . - . ID=Thaps11639.1;Parent=Thaps11639;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 737829 739241 . - . ID=Thaps11640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF46];external_name=Thaps11640;logic_name=jgi_thaps3 chr20 ensembl transcript 737829 739241 . - . ID=Thaps11640;Parent=Thaps11640;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 737829 739241 . - 0 ID=Thaps11640;Parent=Thaps11640;rank=1 chr20 . exon 737829 739241 . - . ID=Thaps11640.1;Parent=Thaps11640;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 733513 733674 . + . ID=Thaps264746;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF44];external_name=Thaps264746;logic_name=jgi_thaps3 chr20 ensembl transcript 733513 733674 . + . ID=Thaps264746;Parent=Thaps264746;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 733513 733674 . + 0 ID=Thaps264746;Parent=Thaps264746;rank=1 chr20 . exon 733513 733674 . + . ID=Thaps264746.1;Parent=Thaps264746;constitutive=1;rank=1 chr20 . repeat_region 742286 742307 . ? . description=trf chr20 ensembl rRNA_gene 747002 747115 . + . ID=EPrTPOG00000000014;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr20 ensembl rRNA 747002 747115 . + . ID=EPrTPOT00000000002;Parent=EPrTPOG00000000014;biotype=rRNA;logic_name=ncrna_eg chr20 . exon 747002 747115 . + . ID=EPrTPOE00000000014;Parent=EPrTPOT00000000002;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 741498 746629 . + . ID=Thaps11641;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF47];external_name=Thaps11641;logic_name=jgi_thaps3 chr20 ensembl transcript 741498 746629 . + . ID=Thaps11641;Parent=Thaps11641;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 741498 743218 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=1 chr20 . exon 741498 743218 . + . ID=Thaps11641.1;Parent=Thaps11641;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 743310 743332 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=2 chr20 . exon 743310 743332 . + . ID=Thaps11641.2;Parent=Thaps11641;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 743423 743591 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=3 chr20 . exon 743423 743591 . + . ID=Thaps11641.3;Parent=Thaps11641;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 743695 743729 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=4 chr20 . exon 743695 743729 . + . ID=Thaps11641.4;Parent=Thaps11641;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 743810 743871 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=5 chr20 . exon 743810 743871 . + . ID=Thaps11641.5;Parent=Thaps11641;constitutive=1;ensembl_end_phase=2;rank=5 chr20 . CDS 743948 744317 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=6 chr20 . exon 743948 744317 . + . ID=Thaps11641.6;Parent=Thaps11641;constitutive=1;ensembl_end_phase=1;rank=6 chr20 . CDS 744390 744809 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=7 chr20 . exon 744390 744809 . + . ID=Thaps11641.7;Parent=Thaps11641;constitutive=1;rank=7 chr20 . CDS 744892 745744 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=8 chr20 . exon 744892 745744 . + . ID=Thaps11641.8;Parent=Thaps11641;constitutive=1;ensembl_end_phase=1;rank=8 chr20 . CDS 745829 746006 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=9 chr20 . exon 745829 746006 . + . ID=Thaps11641.9;Parent=Thaps11641;constitutive=1;ensembl_end_phase=1;rank=9 chr20 . CDS 746078 746629 . + 0 ID=Thaps11641;Parent=Thaps11641;rank=10 chr20 . exon 746078 746629 . + . ID=Thaps11641.10;Parent=Thaps11641;constitutive=1;rank=10 chr20 . repeat_region 759497 759505 . ? . description=dust chr20 . repeat_region 759630 759637 . ? . description=dust chr20 ensembl protein_coding_gene 754003 755407 . - . ID=Thaps11643;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF49];external_name=Thaps11643;logic_name=jgi_thaps3 chr20 ensembl transcript 754003 755407 . - . ID=Thaps11643;Parent=Thaps11643;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 754003 754512 . - 0 ID=Thaps11643;Parent=Thaps11643;rank=2 chr20 . exon 754003 754512 . - . ID=Thaps11643.2;Parent=Thaps11643;constitutive=1;rank=2 chr20 . CDS 754616 755407 . - 0 ID=Thaps11643;Parent=Thaps11643;rank=1 chr20 . exon 754616 755407 . - . ID=Thaps11643.1;Parent=Thaps11643;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 756408 759028 . + . ID=Thaps270060;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF50];external_name=Thaps270060;logic_name=jgi_thaps3 chr20 ensembl transcript 756408 759028 . + . ID=Thaps270060;Parent=Thaps270060;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 756408 756530 . + 0 ID=Thaps270060;Parent=Thaps270060;rank=1 chr20 . exon 756408 756530 . + . ID=Thaps270060.1;Parent=Thaps270060;constitutive=1;rank=1 chr20 . CDS 757253 757468 . + 0 ID=Thaps270060;Parent=Thaps270060;rank=2 chr20 . exon 757253 757468 . + . ID=Thaps270060.2;Parent=Thaps270060;constitutive=1;rank=2 chr20 . CDS 757557 757662 . + 0 ID=Thaps270060;Parent=Thaps270060;rank=3 chr20 . exon 757557 757662 . + . ID=Thaps270060.3;Parent=Thaps270060;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 758236 758345 . + 0 ID=Thaps270060;Parent=Thaps270060;rank=4 chr20 . exon 758236 758345 . + . ID=Thaps270060.4;Parent=Thaps270060;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 758443 758859 . + 0 ID=Thaps270060;Parent=Thaps270060;rank=5 chr20 . exon 758443 758859 . + . ID=Thaps270060.5;Parent=Thaps270060;constitutive=1;rank=5 chr20 . CDS 758960 759028 . + 0 ID=Thaps270060;Parent=Thaps270060;rank=6 chr20 . exon 758960 759028 . + . ID=Thaps270060.6;Parent=Thaps270060;constitutive=1;rank=6 chr20 ensembl protein_coding_gene 751554 752663 . + . ID=Thaps38473;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF48];external_name=Thaps38473;logic_name=jgi_thaps3 chr20 ensembl transcript 751554 752663 . + . ID=Thaps38473;Parent=Thaps38473;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 751554 751686 . + 0 ID=Thaps38473;Parent=Thaps38473;rank=1 chr20 . exon 751554 751686 . + . ID=Thaps38473.1;Parent=Thaps38473;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 752110 752663 . + 0 ID=Thaps38473;Parent=Thaps38473;rank=2 chr20 . exon 752110 752663 . + . ID=Thaps38473.2;Parent=Thaps38473;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . biological_region 764619 764623 0.999 - . logic_name=eponine chr20 . repeat_region 764809 764911 . + . description=MuDR2_TP chr20 . repeat_region 764821 764933 . - . description=MuDR1_TP chr20 . repeat_region 765120 765173 . + . description=MuDR1_TP chr20 . repeat_region 765442 765499 . - . description=MuDR1_TP chr20 . repeat_region 766027 766060 . ? . description=trf chr20 . repeat_region 767184 767213 . ? . description=trf chr20 . repeat_region 767352 769223 . + . description=Harbinger3_TP chr20 . repeat_region 767663 767728 . ? . description=trf chr20 . repeat_region 767702 767751 . ? . description=trf chr20 . repeat_region 769404 769478 . - . description=Harbinger3_TP chr20 ensembl protein_coding_gene 770048 770938 . - . ID=Thaps11646;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF52];external_name=Thaps11646;logic_name=jgi_thaps3 chr20 ensembl transcript 770048 770938 . - . ID=Thaps11646;Parent=Thaps11646;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 770048 770379 . - 0 ID=Thaps11646;Parent=Thaps11646;rank=2 chr20 . exon 770048 770379 . - . ID=Thaps11646.2;Parent=Thaps11646;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 770695 770938 . - 0 ID=Thaps11646;Parent=Thaps11646;rank=1 chr20 ensembl protein_coding_gene 762624 764472 . - . ID=Thaps25677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF51];external_name=Thaps25677;logic_name=jgi_thaps3 chr20 ensembl transcript 762624 764472 . - . ID=Thaps25677;Parent=Thaps25677;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 762624 763006 . - 0 ID=Thaps25677;Parent=Thaps25677;rank=3 chr20 . exon 762624 763006 . - . ID=Thaps25677.3;Parent=Thaps25677;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 763222 763680 . - 0 ID=Thaps25677;Parent=Thaps25677;rank=2 chr20 . exon 763222 763680 . - . ID=Thaps25677.2;Parent=Thaps25677;constitutive=1;rank=2 chr20 . CDS 763839 764472 . - 0 ID=Thaps25677;Parent=Thaps25677;rank=1 chr20 . exon 763839 764472 . - . ID=Thaps25677.1;Parent=Thaps25677;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . repeat_region 771027 771036 . ? . description=dust chr20 . repeat_region 773385 774940 . - . description=RTE1_TP chr20 . exon 770695 770938 . - . ID=Thaps11646.1;Parent=Thaps11646;constitutive=1;ensembl_end_phase=1;rank=1 chr20 ensembl protein_coding_gene 775146 776811 . - . ID=Thaps11647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF53];external_name=Thaps11647;logic_name=jgi_thaps3 chr20 ensembl transcript 775146 776811 . - . ID=Thaps11647;Parent=Thaps11647;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 775146 775436 . - 0 ID=Thaps11647;Parent=Thaps11647;rank=6 chr20 . exon 775146 775436 . - . ID=Thaps11647.6;Parent=Thaps11647;constitutive=1;rank=6 chr20 . CDS 775544 775702 . - 0 ID=Thaps11647;Parent=Thaps11647;rank=5 chr20 . exon 775544 775702 . - . ID=Thaps11647.5;Parent=Thaps11647;constitutive=1;rank=5 chr20 . CDS 775810 775968 . - 0 ID=Thaps11647;Parent=Thaps11647;rank=4 chr20 . exon 775810 775968 . - . ID=Thaps11647.4;Parent=Thaps11647;constitutive=1;rank=4 chr20 . CDS 776076 776234 . - 0 ID=Thaps11647;Parent=Thaps11647;rank=3 chr20 . exon 776076 776234 . - . ID=Thaps11647.3;Parent=Thaps11647;constitutive=1;rank=3 chr20 . CDS 776342 776500 . - 0 ID=Thaps11647;Parent=Thaps11647;rank=2 chr20 . exon 776342 776500 . - . ID=Thaps11647.2;Parent=Thaps11647;constitutive=1;rank=2 chr20 . CDS 776608 776811 . - 0 ID=Thaps11647;Parent=Thaps11647;rank=1 chr20 . exon 776608 776811 . - . ID=Thaps11647.1;Parent=Thaps11647;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 777126 778146 . + . ID=Thaps11648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF54];external_name=Thaps11648;logic_name=jgi_thaps3 chr20 ensembl transcript 777126 778146 . + . ID=Thaps11648;Parent=Thaps11648;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 777126 777475 . + 0 ID=Thaps11648;Parent=Thaps11648;rank=1 chr20 . exon 777126 777475 . + . ID=Thaps11648.1;Parent=Thaps11648;constitutive=1;ensembl_end_phase=2;rank=1 chr20 . CDS 777552 778146 . + 0 ID=Thaps11648;Parent=Thaps11648;rank=2 chr20 . exon 777552 778146 . + . ID=Thaps11648.2;Parent=Thaps11648;constitutive=1;ensembl_end_phase=1;rank=2 chr20 ensembl protein_coding_gene 778516 779279 . + . ID=Thaps11649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF55];external_name=Thaps11649;logic_name=jgi_thaps3 chr20 ensembl transcript 778516 779279 . + . ID=Thaps11649;Parent=Thaps11649;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 778516 778807 . + 0 ID=Thaps11649;Parent=Thaps11649;rank=1 chr20 . exon 778516 778807 . + . ID=Thaps11649.1;Parent=Thaps11649;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 778897 779279 . + 0 ID=Thaps11649;Parent=Thaps11649;rank=2 chr20 . exon 778897 779279 . + . ID=Thaps11649.2;Parent=Thaps11649;constitutive=1;ensembl_end_phase=2;rank=2 chr20 ensembl protein_coding_gene 780507 781002 . + . ID=Thaps11650;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF56];external_name=Thaps11650;logic_name=jgi_thaps3 chr20 ensembl transcript 780507 781002 . + . ID=Thaps11650;Parent=Thaps11650;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 780507 780663 . + 0 ID=Thaps11650;Parent=Thaps11650;rank=1 chr20 . exon 780507 780663 . + . ID=Thaps11650.1;Parent=Thaps11650;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 780791 781002 . + 0 ID=Thaps11650;Parent=Thaps11650;rank=2 chr20 . exon 780791 781002 . + . ID=Thaps11650.2;Parent=Thaps11650;constitutive=1;ensembl_end_phase=2;rank=2 chr20 ensembl protein_coding_gene 781374 785537 . + . ID=Thaps25678;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF57];external_name=Thaps25678;logic_name=jgi_thaps3 chr20 ensembl transcript 781374 785537 . + . ID=Thaps25678;Parent=Thaps25678;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 781374 781601 . + 0 ID=Thaps25678;Parent=Thaps25678;rank=1 chr20 . exon 781374 781601 . + . ID=Thaps25678.1;Parent=Thaps25678;constitutive=1;rank=1 chr20 . CDS 781636 781874 . + 0 ID=Thaps25678;Parent=Thaps25678;rank=2 chr20 . exon 781636 781874 . + . ID=Thaps25678.2;Parent=Thaps25678;constitutive=1;ensembl_end_phase=2;rank=2 chr20 . CDS 782132 785211 . + 0 ID=Thaps25678;Parent=Thaps25678;rank=3 chr20 . exon 782132 785211 . + . ID=Thaps25678.3;Parent=Thaps25678;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 785302 785537 . + 0 ID=Thaps25678;Parent=Thaps25678;rank=4 chr20 . exon 785302 785537 . + . ID=Thaps25678.4;Parent=Thaps25678;constitutive=1;ensembl_end_phase=2;rank=4 chr20 ensembl protein_coding_gene 786075 788119 . - . ID=Thaps25679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF58];external_name=Thaps25679;logic_name=jgi_thaps3 chr20 ensembl transcript 786075 788119 . - . ID=Thaps25679;Parent=Thaps25679;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 786075 786723 . - 0 ID=Thaps25679;Parent=Thaps25679;rank=3 chr20 . exon 786075 786723 . - . ID=Thaps25679.3;Parent=Thaps25679;constitutive=1;ensembl_end_phase=1;rank=3 chr20 . CDS 786832 787026 . - 0 ID=Thaps25679;Parent=Thaps25679;rank=2 chr20 . exon 786832 787026 . - . ID=Thaps25679.2;Parent=Thaps25679;constitutive=1;rank=2 chr20 . CDS 787137 788119 . - 0 ID=Thaps25679;Parent=Thaps25679;rank=1 chr20 . exon 787137 788119 . - . ID=Thaps25679.1;Parent=Thaps25679;constitutive=1;ensembl_end_phase=2;rank=1 chr20 ensembl protein_coding_gene 789317 791252 . + . ID=Thaps25680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF59];external_name=Thaps25680;logic_name=jgi_thaps3 chr20 ensembl transcript 789317 791252 . + . ID=Thaps25680;Parent=Thaps25680;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 789317 789533 . + 0 ID=Thaps25680;Parent=Thaps25680;rank=1 chr20 . exon 789317 789533 . + . ID=Thaps25680.1;Parent=Thaps25680;constitutive=1;ensembl_end_phase=1;rank=1 chr20 . CDS 789618 790341 . + 0 ID=Thaps25680;Parent=Thaps25680;rank=2 chr20 . exon 789618 790341 . + . ID=Thaps25680.2;Parent=Thaps25680;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 790445 790537 . + 0 ID=Thaps25680;Parent=Thaps25680;rank=3 chr20 . CDS 790646 791252 . + 0 ID=Thaps25680;Parent=Thaps25680;rank=4 chr20 . repeat_region 794482 794523 . ? . description=trf chr20 . repeat_region 794599 794638 . ? . description=trf chr20 . repeat_region 794725 794784 . ? . description=trf chr20 . repeat_region 794728 794784 . ? . description=dust chr20 . repeat_region 794782 794855 . ? . description=trf chr20 . repeat_region 795089 795169 . ? . description=trf chr20 . repeat_region 795162 795192 . ? . description=trf chr20 . repeat_region 796524 796602 . ? . description=trf chr20 . repeat_region 796524 796614 . - . description=Harbinger2N_TP chr20 . repeat_region 796527 796611 . ? . description=dust chr20 . repeat_region 796528 796611 . ? . description=trf chr20 . repeat_region 796608 796830 . - . description=Copia8I_TP chr20 . repeat_region 796890 796919 . ? . description=trf chr20 . repeat_region 797124 797177 . - . description=MuDR1_TP chr20 . repeat_region 800001 800234 . ? . description=trf chr20 . repeat_region 800001 800234 . ? . description=dust chr20 ensembl protein_coding_gene 791829 794865 . - . ID=Thaps11654;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF60];external_name=Thaps11654;logic_name=jgi_thaps3 chr20 ensembl transcript 791829 794865 . - . ID=Thaps11654;Parent=Thaps11654;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 791829 793244 . - 0 ID=Thaps11654;Parent=Thaps11654;rank=6 chr20 . exon 791829 793244 . - . ID=Thaps11654.6;Parent=Thaps11654;constitutive=1;rank=6 chr20 . CDS 793347 793434 . - 0 ID=Thaps11654;Parent=Thaps11654;rank=5 chr20 . exon 793347 793434 . - . ID=Thaps11654.5;Parent=Thaps11654;constitutive=1;ensembl_end_phase=1;rank=5 chr20 . CDS 793502 793773 . - 0 ID=Thaps11654;Parent=Thaps11654;rank=4 chr20 . exon 793502 793773 . - . ID=Thaps11654.4;Parent=Thaps11654;constitutive=1;ensembl_end_phase=2;rank=4 chr20 . CDS 793852 794141 . - 0 ID=Thaps11654;Parent=Thaps11654;rank=3 chr20 . exon 793852 794141 . - . ID=Thaps11654.3;Parent=Thaps11654;constitutive=1;ensembl_end_phase=2;rank=3 chr20 . CDS 794234 794543 . - 0 ID=Thaps11654;Parent=Thaps11654;rank=2 chr20 . exon 794234 794543 . - . ID=Thaps11654.2;Parent=Thaps11654;constitutive=1;ensembl_end_phase=1;rank=2 chr20 . CDS 794785 794865 . - 0 ID=Thaps11654;Parent=Thaps11654;rank=1 chr20 . exon 794785 794865 . - . ID=Thaps11654.1;Parent=Thaps11654;constitutive=1;rank=1 chr20 ensembl protein_coding_gene 797191 800005 . + . ID=Thaps11655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF61];external_name=Thaps11655;logic_name=jgi_thaps3 chr20 ensembl transcript 797191 800005 . + . ID=Thaps11655;Parent=Thaps11655;biotype=protein_coding;logic_name=jgi_thaps3 chr20 . CDS 797191 799317 . + 0 ID=Thaps11655;Parent=Thaps11655;rank=1 chr20 . exon 797191 799317 . + . ID=Thaps11655.1;Parent=Thaps11655;constitutive=1;rank=1 chr20 . CDS 799415 800005 . + 0 ID=Thaps11655;Parent=Thaps11655;rank=2 chr20 . exon 799415 800005 . + . ID=Thaps11655.2;Parent=Thaps11655;constitutive=1;rank=2 chr20 . exon 790445 790537 . + . ID=Thaps25680.3;Parent=Thaps25680;constitutive=1;rank=3 chr20 . exon 790646 791252 . + . ID=Thaps25680.4;Parent=Thaps25680;constitutive=1;ensembl_end_phase=1;rank=4 ##gff-version 3 ##sequence-region 11a 1 806142 chr11a . repeat_region 1 122 . ? . description=dust chr11a . repeat_region 1 123 . ? . description=trf chr11a . repeat_region 123 387 . ? . description=trf chr11a . repeat_region 4595 5022 . - . description=TE2b_TP chr11a . repeat_region 8209 11740 . + . description=Copia7I_TP chr11a ensembl protein_coding_gene 1127 1687 . + . ID=Thaps8615;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBK5];external_name=Thaps8615;logic_name=jgi_thaps3 chr11a ensembl transcript 1127 1687 . + . ID=Thaps8615;Parent=Thaps8615;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 1127 1687 . + 0 ID=Thaps8615;Parent=Thaps8615;rank=1 chr11a . exon 1127 1687 . + . ID=Thaps8615.1;Parent=Thaps8615;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 1773 4326 . - . ID=Thaps8616;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBK6];external_name=Thaps8616;logic_name=jgi_thaps3 chr11a ensembl transcript 1773 4326 . - . ID=Thaps8616;Parent=Thaps8616;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 1773 1916 . - 0 ID=Thaps8616;Parent=Thaps8616;rank=5 chr11a . exon 1773 1916 . - . ID=Thaps8616.5;Parent=Thaps8616;constitutive=1;rank=5 chr11a . CDS 2008 2079 . - 0 ID=Thaps8616;Parent=Thaps8616;rank=4 chr11a . exon 2008 2079 . - . ID=Thaps8616.4;Parent=Thaps8616;constitutive=1;rank=4 chr11a . CDS 2195 2818 . - 0 ID=Thaps8616;Parent=Thaps8616;rank=3 chr11a . exon 2195 2818 . - . ID=Thaps8616.3;Parent=Thaps8616;constitutive=1;rank=3 chr11a . CDS 2938 3726 . - 0 ID=Thaps8616;Parent=Thaps8616;rank=2 chr11a . exon 2938 3726 . - . ID=Thaps8616.2;Parent=Thaps8616;constitutive=1;rank=2 chr11a . CDS 3928 4326 . - 0 ID=Thaps8616;Parent=Thaps8616;rank=1 chr11a . exon 3928 4326 . - . ID=Thaps8616.1;Parent=Thaps8616;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 5423 7623 . + . ID=Thaps8617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBK7];external_name=Thaps8617;logic_name=jgi_thaps3 chr11a ensembl transcript 5423 7623 . + . ID=Thaps8617;Parent=Thaps8617;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 5423 6071 . + 0 ID=Thaps8617;Parent=Thaps8617;rank=1 chr11a . exon 5423 6071 . + . ID=Thaps8617.1;Parent=Thaps8617;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 6128 6386 . + 0 ID=Thaps8617;Parent=Thaps8617;rank=2 chr11a . exon 6128 6386 . + . ID=Thaps8617.2;Parent=Thaps8617;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 6461 6517 . + 0 ID=Thaps8617;Parent=Thaps8617;rank=3 chr11a . exon 6461 6517 . + . ID=Thaps8617.3;Parent=Thaps8617;constitutive=1;rank=3 chr11a . CDS 6543 7623 . + 0 ID=Thaps8617;Parent=Thaps8617;rank=4 chr11a . exon 6543 7623 . + . ID=Thaps8617.4;Parent=Thaps8617;constitutive=1;ensembl_end_phase=1;rank=4 chr11a ensembl protein_coding_gene 13583 45653 . + . ID=Thaps36648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBK8];external_name=Thaps36648;logic_name=jgi_thaps3 chr11a ensembl transcript 13583 45653 . + . ID=Thaps36648;Parent=Thaps36648;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 13583 13950 . + 0 ID=Thaps36648;Parent=Thaps36648;rank=1 chr11a . exon 13583 13950 . + . ID=Thaps36648.1;Parent=Thaps36648;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 14029 14162 . + 0 ID=Thaps36648;Parent=Thaps36648;rank=2 chr11a . exon 14029 14162 . + . ID=Thaps36648.2;Parent=Thaps36648;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 14269 14536 . + 0 ID=Thaps36648;Parent=Thaps36648;rank=3 chr11a . exon 14269 14536 . + . ID=Thaps36648.3;Parent=Thaps36648;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 45524 45653 . + 0 ID=Thaps36648;Parent=Thaps36648;rank=4 chr11a . repeat_region 19896 19917 . ? . description=trf chr11a . repeat_region 19945 20223 . + . description=TE2c_TP chr11a . repeat_region 20001 20063 . ? . description=dust chr11a . repeat_region 20015 20069 . ? . description=trf chr11a . repeat_region 20225 20416 . - . description=TE2c_TP chr11a . repeat_region 20622 20971 . + . description=Harbinger4_TP chr11a . repeat_region 20789 20796 . ? . description=dust chr11a . repeat_region 20932 20978 . - . description=Harbinger4_TP chr11a . repeat_region 23799 23806 . ? . description=dust chr11a . repeat_region 24282 24302 . ? . description=trf chr11a . repeat_region 24282 24302 . ? . description=dust chr11a . repeat_region 24590 24609 . ? . description=trf chr11a . repeat_region 24590 24609 . ? . description=dust chr11a ensembl protein_coding_gene 13583 45653 . + . ID=Thaps36648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBK8];external_name=Thaps36648;logic_name=jgi_thaps3 chr11a ensembl transcript 13583 45653 . + . ID=Thaps36648;Parent=Thaps36648;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 13583 13950 . + 0 ID=Thaps36648;Parent=Thaps36648;rank=1 chr11a . CDS 14029 14162 . + 0 ID=Thaps36648;Parent=Thaps36648;rank=2 chr11a . CDS 14269 14536 . + 0 ID=Thaps36648;Parent=Thaps36648;rank=3 chr11a . CDS 45524 45653 . + 0 ID=Thaps36648;Parent=Thaps36648;rank=4 chr11a . repeat_region 42554 44252 . ? . description=dust chr11a . repeat_region 48424 48484 . ? . description=dust chr11a ensembl protein_coding_gene 47659 49599 . + . ID=Thaps24273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBK9];external_name=Thaps24273;logic_name=jgi_thaps3 chr11a ensembl transcript 47659 49599 . + . ID=Thaps24273;Parent=Thaps24273;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 47659 49342 . + 0 ID=Thaps24273;Parent=Thaps24273;rank=1 chr11a . exon 47659 49342 . + . ID=Thaps24273.1;Parent=Thaps24273;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 49448 49599 . + 0 ID=Thaps24273;Parent=Thaps24273;rank=2 chr11a . exon 49448 49599 . + . ID=Thaps24273.2;Parent=Thaps24273;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . exon 45524 45653 . + . ID=Thaps36648.4;Parent=Thaps36648;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . repeat_region 54858 57102 . + . description=Harbinger4_TP chr11a . repeat_region 56829 56871 . ? . description=trf chr11a . repeat_region 58088 58405 . + . description=Harbinger4_TP chr11a . repeat_region 58404 61297 . - . description=Harbinger4_TP chr11a . repeat_region 59718 59794 . ? . description=trf chr11a ensembl protein_coding_gene 52497 54621 . - . ID=Thaps24274;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL0];external_name=Thaps24274;logic_name=jgi_thaps3 chr11a ensembl transcript 52497 54621 . - . ID=Thaps24274;Parent=Thaps24274;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 52497 52640 . - 0 ID=Thaps24274;Parent=Thaps24274;rank=4 chr11a . exon 52497 52640 . - . ID=Thaps24274.4;Parent=Thaps24274;constitutive=1;rank=4 chr11a . CDS 52732 52803 . - 0 ID=Thaps24274;Parent=Thaps24274;rank=3 chr11a . exon 52732 52803 . - . ID=Thaps24274.3;Parent=Thaps24274;constitutive=1;rank=3 chr11a . CDS 53027 53536 . - 0 ID=Thaps24274;Parent=Thaps24274;rank=2 chr11a . exon 53027 53536 . - . ID=Thaps24274.2;Parent=Thaps24274;constitutive=1;rank=2 chr11a . CDS 53656 54621 . - 0 ID=Thaps24274;Parent=Thaps24274;rank=1 chr11a . exon 53656 54621 . - . ID=Thaps24274.1;Parent=Thaps24274;constitutive=1;rank=1 chr11a . repeat_region 59731 59790 . ? . description=dust chr11a . repeat_region 61523 61585 . ? . description=dust chr11a . repeat_region 61780 61959 . ? . description=dust chr11a . repeat_region 63982 64000 . ? . description=dust chr11a . repeat_region 65701 65708 . ? . description=dust chr11a . repeat_region 66513 66534 . ? . description=dust chr11a . repeat_region 69170 69203 . ? . description=dust chr11a ensembl protein_coding_gene 66327 68695 . + . ID=Thaps24275;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL1];external_name=Thaps24275;logic_name=jgi_thaps3 chr11a ensembl transcript 66327 68695 . + . ID=Thaps24275;Parent=Thaps24275;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 66327 68183 . + 0 ID=Thaps24275;Parent=Thaps24275;rank=1 chr11a . exon 66327 68183 . + . ID=Thaps24275.1;Parent=Thaps24275;constitutive=1;rank=1 chr11a . CDS 68243 68695 . + 0 ID=Thaps24275;Parent=Thaps24275;rank=2 chr11a . exon 68243 68695 . + . ID=Thaps24275.2;Parent=Thaps24275;constitutive=1;rank=2 chr11a . repeat_region 70449 70484 . ? . description=trf chr11a . repeat_region 74027 75027 . ? . description=trf chr11a ensembl protein_coding_gene 79427 80226 . + . ID=Thaps18071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL6];external_name=Thaps18071;logic_name=jgi_thaps3 chr11a ensembl transcript 79427 80226 . + . ID=Thaps18071;Parent=Thaps18071;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 79427 79629 . + 0 ID=Thaps18071;Parent=Thaps18071;rank=1 chr11a . exon 79427 79629 . + . ID=Thaps18071.1;Parent=Thaps18071;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 79663 79967 . + 0 ID=Thaps18071;Parent=Thaps18071;rank=2 chr11a . CDS 80108 80226 . + 0 ID=Thaps18071;Parent=Thaps18071;rank=3 chr11a ensembl protein_coding_gene 75675 75992 . + . ID=Thaps19553;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL5];external_name=Thaps19553;logic_name=jgi_thaps3 chr11a ensembl transcript 75675 75992 . + . ID=Thaps19553;Parent=Thaps19553;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 75675 75992 . + 0 ID=Thaps19553;Parent=Thaps19553;rank=1 chr11a . exon 75675 75992 . + . ID=Thaps19553.1;Parent=Thaps19553;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 70429 71943 . - . ID=Thaps269547;biotype=protein_coding;description=Dnaj-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL2];external_name=Thaps269547;logic_name=jgi_thaps3 chr11a ensembl transcript 70429 71943 . - . ID=Thaps269547;Parent=Thaps269547;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 70429 70845 . - 0 ID=Thaps269547;Parent=Thaps269547;rank=4 chr11a . exon 70429 70845 . - . ID=Thaps269547.4;Parent=Thaps269547;constitutive=1;rank=4 chr11a . CDS 70973 71310 . - 0 ID=Thaps269547;Parent=Thaps269547;rank=3 chr11a . exon 70973 71310 . - . ID=Thaps269547.3;Parent=Thaps269547;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 71403 71869 . - 0 ID=Thaps269547;Parent=Thaps269547;rank=2 chr11a . exon 71403 71869 . - . ID=Thaps269547.2;Parent=Thaps269547;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 71897 71943 . - 0 ID=Thaps269547;Parent=Thaps269547;rank=1 chr11a . exon 71897 71943 . - . ID=Thaps269547.1;Parent=Thaps269547;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 73258 73653 . - . ID=Thaps36605;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL4];external_name=Thaps36605;logic_name=jgi_thaps3 chr11a ensembl transcript 73258 73653 . - . ID=Thaps36605;Parent=Thaps36605;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 73258 73653 . - 0 ID=Thaps36605;Parent=Thaps36605;rank=1 chr11a . exon 73258 73653 . - . ID=Thaps36605.1;Parent=Thaps36605;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 72835 73098 . - . ID=Thaps36649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL3];external_name=Thaps36649;logic_name=jgi_thaps3 chr11a ensembl transcript 72835 73098 . - . ID=Thaps36649;Parent=Thaps36649;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 72835 73098 . - 0 ID=Thaps36649;Parent=Thaps36649;rank=1 chr11a . exon 72835 73098 . - . ID=Thaps36649.1;Parent=Thaps36649;constitutive=1;rank=1 chr11a . exon 79663 79967 . + . ID=Thaps18071.2;Parent=Thaps18071;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . exon 80108 80226 . + . ID=Thaps18071.3;Parent=Thaps18071;constitutive=1;ensembl_end_phase=2;rank=3 chr11a ensembl protein_coding_gene 83404 84586 . - . ID=Thaps24281;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL8];external_name=Thaps24281;logic_name=jgi_thaps3 chr11a ensembl transcript 83404 84586 . - . ID=Thaps24281;Parent=Thaps24281;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 83404 83496 . - 0 ID=Thaps24281;Parent=Thaps24281;rank=3 chr11a . exon 83404 83496 . - . ID=Thaps24281.3;Parent=Thaps24281;constitutive=1;rank=3 chr11a . CDS 83610 84341 . - 0 ID=Thaps24281;Parent=Thaps24281;rank=2 chr11a . exon 83610 84341 . - . ID=Thaps24281.2;Parent=Thaps24281;constitutive=1;rank=2 chr11a . CDS 84509 84586 . - 0 ID=Thaps24281;Parent=Thaps24281;rank=1 chr11a . exon 84509 84586 . - . ID=Thaps24281.1;Parent=Thaps24281;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 85114 88164 . - . ID=Thaps24282;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL9];external_name=Thaps24282;logic_name=jgi_thaps3 chr11a ensembl transcript 85114 88164 . - . ID=Thaps24282;Parent=Thaps24282;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 85114 85243 . - 0 ID=Thaps24282;Parent=Thaps24282;rank=4 chr11a . exon 85114 85243 . - . ID=Thaps24282.4;Parent=Thaps24282;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 85573 85601 . - 0 ID=Thaps24282;Parent=Thaps24282;rank=3 chr11a . exon 85573 85601 . - . ID=Thaps24282.3;Parent=Thaps24282;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 85731 86385 . - 0 ID=Thaps24282;Parent=Thaps24282;rank=2 chr11a . exon 85731 86385 . - . ID=Thaps24282.2;Parent=Thaps24282;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 86471 88164 . - 0 ID=Thaps24282;Parent=Thaps24282;rank=1 chr11a . exon 86471 88164 . - . ID=Thaps24282.1;Parent=Thaps24282;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 88718 90131 . + . ID=Thaps24283;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBM0];external_name=Thaps24283;logic_name=jgi_thaps3 chr11a ensembl transcript 88718 90131 . + . ID=Thaps24283;Parent=Thaps24283;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 88718 88810 . + 0 ID=Thaps24283;Parent=Thaps24283;rank=1 chr11a . exon 88718 88810 . + . ID=Thaps24283.1;Parent=Thaps24283;constitutive=1;rank=1 chr11a . CDS 88908 90131 . + 0 ID=Thaps24283;Parent=Thaps24283;rank=2 chr11a . exon 88908 90131 . + . ID=Thaps24283.2;Parent=Thaps24283;constitutive=1;rank=2 chr11a ensembl protein_coding_gene 81214 82895 . + . ID=Thaps8636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBL7];external_name=Thaps8636;logic_name=jgi_thaps3 chr11a ensembl transcript 81214 82895 . + . ID=Thaps8636;Parent=Thaps8636;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 81214 81318 . + 0 ID=Thaps8636;Parent=Thaps8636;rank=1 chr11a . exon 81214 81318 . + . ID=Thaps8636.1;Parent=Thaps8636;constitutive=1;rank=1 chr11a . CDS 81589 81768 . + 0 ID=Thaps8636;Parent=Thaps8636;rank=2 chr11a . exon 81589 81768 . + . ID=Thaps8636.2;Parent=Thaps8636;constitutive=1;rank=2 chr11a . CDS 82095 82895 . + 0 ID=Thaps8636;Parent=Thaps8636;rank=3 chr11a . exon 82095 82895 . + . ID=Thaps8636.3;Parent=Thaps8636;constitutive=1;rank=3 chr11a . repeat_region 94873 94891 . ? . description=dust chr11a . repeat_region 95553 95571 . ? . description=dust chr11a . repeat_region 96164 96183 . ? . description=dust chr11a ensembl protein_coding_gene 94142 95253 . - . ID=Thaps24284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBM1];external_name=Thaps24284;logic_name=jgi_thaps3 chr11a ensembl transcript 94142 95253 . - . ID=Thaps24284;Parent=Thaps24284;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 94142 94545 . - 0 ID=Thaps24284;Parent=Thaps24284;rank=3 chr11a . exon 94142 94545 . - . ID=Thaps24284.3;Parent=Thaps24284;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 94571 94864 . - 0 ID=Thaps24284;Parent=Thaps24284;rank=2 chr11a . exon 94571 94864 . - . ID=Thaps24284.2;Parent=Thaps24284;constitutive=1;rank=2 chr11a . CDS 95019 95253 . - 0 ID=Thaps24284;Parent=Thaps24284;rank=1 chr11a . exon 95019 95253 . - . ID=Thaps24284.1;Parent=Thaps24284;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 96253 99091 . + . ID=Thaps24285;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBM2];external_name=Thaps24285;logic_name=jgi_thaps3 chr11a ensembl transcript 96253 99091 . + . ID=Thaps24285;Parent=Thaps24285;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 96253 97170 . + 0 ID=Thaps24285;Parent=Thaps24285;rank=1 chr11a . exon 96253 97170 . + . ID=Thaps24285.1;Parent=Thaps24285;constitutive=1;rank=1 chr11a . CDS 97268 99091 . + 0 ID=Thaps24285;Parent=Thaps24285;rank=2 chr11a . exon 97268 99091 . + . ID=Thaps24285.2;Parent=Thaps24285;constitutive=1;rank=2 chr11a ensembl protein_coding_gene 100425 102823 . + . ID=Thaps13023;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBM3];external_name=Thaps13023;logic_name=jgi_thaps3 chr11a ensembl transcript 100425 102823 . + . ID=Thaps13023;Parent=Thaps13023;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 100425 100527 . + 0 ID=Thaps13023;Parent=Thaps13023;rank=1 chr11a . exon 100425 100527 . + . ID=Thaps13023.1;Parent=Thaps13023;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 100633 100777 . + 0 ID=Thaps13023;Parent=Thaps13023;rank=2 chr11a . exon 100633 100777 . + . ID=Thaps13023.2;Parent=Thaps13023;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 100895 101156 . + 0 ID=Thaps13023;Parent=Thaps13023;rank=3 chr11a . exon 100895 101156 . + . ID=Thaps13023.3;Parent=Thaps13023;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 101196 101291 . + 0 ID=Thaps13023;Parent=Thaps13023;rank=4 chr11a . exon 101196 101291 . + . ID=Thaps13023.4;Parent=Thaps13023;constitutive=1;rank=4 chr11a . CDS 101390 102254 . + 0 ID=Thaps13023;Parent=Thaps13023;rank=5 chr11a . exon 101390 102254 . + . ID=Thaps13023.5;Parent=Thaps13023;constitutive=1;ensembl_end_phase=1;rank=5 chr11a . CDS 102342 102823 . + 0 ID=Thaps13023;Parent=Thaps13023;rank=6 chr11a . exon 102342 102823 . + . ID=Thaps13023.6;Parent=Thaps13023;constitutive=1;ensembl_end_phase=2;rank=6 chr11a ensembl protein_coding_gene 105842 108722 . + . ID=Thaps36563;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBM5];external_name=Thaps36563;logic_name=jgi_thaps3 chr11a ensembl transcript 105842 108722 . + . ID=Thaps36563;Parent=Thaps36563;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 105842 105994 . + 0 ID=Thaps36563;Parent=Thaps36563;rank=1 chr11a . exon 105842 105994 . + . ID=Thaps36563.1;Parent=Thaps36563;constitutive=1;rank=1 chr11a . CDS 106091 108046 . + 0 ID=Thaps36563;Parent=Thaps36563;rank=2 chr11a . exon 106091 108046 . + . ID=Thaps36563.2;Parent=Thaps36563;constitutive=1;rank=2 chr11a . CDS 108149 108345 . + 0 ID=Thaps36563;Parent=Thaps36563;rank=3 chr11a . exon 108149 108345 . + . ID=Thaps36563.3;Parent=Thaps36563;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 108440 108722 . + 0 ID=Thaps36563;Parent=Thaps36563;rank=4 chr11a . exon 108440 108722 . + . ID=Thaps36563.4;Parent=Thaps36563;constitutive=1;ensembl_end_phase=1;rank=4 chr11a ensembl protein_coding_gene 102978 104102 . - . ID=Thaps8643;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBM4];external_name=Thaps8643;logic_name=jgi_thaps3 chr11a ensembl transcript 102978 104102 . - . ID=Thaps8643;Parent=Thaps8643;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 102978 104102 . - 0 ID=Thaps8643;Parent=Thaps8643;rank=1 chr11a . exon 102978 104102 . - . ID=Thaps8643.1;Parent=Thaps8643;constitutive=1;rank=1 chr11a . repeat_region 113731 114201 . - . description=scaffold_4_157_1_397572_399445 chr11a . repeat_region 114461 114505 . ? . description=trf chr11a . repeat_region 114469 114524 . ? . description=trf chr11a . repeat_region 115206 115239 . ? . description=trf chr11a . repeat_region 115206 115239 . ? . description=dust chr11a . repeat_region 115206 115241 . ? . description=trf chr11a . repeat_region 116331 116350 . ? . description=trf chr11a . repeat_region 116755 116817 . ? . description=trf chr11a . repeat_region 116760 116817 . ? . description=dust chr11a ensembl protein_coding_gene 115605 117047 . + . ID=Thaps24288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBM7];external_name=Thaps24288;logic_name=jgi_thaps3 chr11a ensembl transcript 115605 117047 . + . ID=Thaps24288;Parent=Thaps24288;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 115605 115894 . + 0 ID=Thaps24288;Parent=Thaps24288;rank=1 chr11a . exon 115605 115894 . + . ID=Thaps24288.1;Parent=Thaps24288;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 116042 117047 . + 0 ID=Thaps24288;Parent=Thaps24288;rank=2 chr11a . exon 116042 117047 . + . ID=Thaps24288.2;Parent=Thaps24288;constitutive=1;ensembl_end_phase=1;rank=2 chr11a ensembl protein_coding_gene 119136 120186 . - . ID=Thaps263755;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBM9];external_name=Thaps263755;logic_name=jgi_thaps3 chr11a ensembl transcript 119136 120186 . - . ID=Thaps263755;Parent=Thaps263755;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 119136 119779 . - 0 ID=Thaps263755;Parent=Thaps263755;rank=3 chr11a . exon 119136 119779 . - . ID=Thaps263755.3;Parent=Thaps263755;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 119864 119950 . - 0 ID=Thaps263755;Parent=Thaps263755;rank=2 chr11a . CDS 120014 120186 . - 0 ID=Thaps263755;Parent=Thaps263755;rank=1 chr11a ensembl protein_coding_gene 113680 114990 . - . ID=Thaps41952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBM6];external_name=Thaps41952;logic_name=jgi_thaps3 chr11a ensembl transcript 113680 114990 . - . ID=Thaps41952;Parent=Thaps41952;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 113680 114990 . - 0 ID=Thaps41952;Parent=Thaps41952;rank=1 chr11a . exon 113680 114990 . - . ID=Thaps41952.1;Parent=Thaps41952;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 117153 118753 . + . ID=Thaps41953;biotype=protein_coding;description=tRNA-splicing ligase RtcB homolog [Source:UniProtKB/Swiss-Prot%3BAcc:B8LBM8];external_name=Thaps41953;logic_name=jgi_thaps3 chr11a ensembl transcript 117153 118753 . + . ID=Thaps41953;Parent=Thaps41953;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 117153 117999 . + 0 ID=Thaps41953;Parent=Thaps41953;rank=1 chr11a . exon 117153 117999 . + . ID=Thaps41953.1;Parent=Thaps41953;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 118078 118395 . + 0 ID=Thaps41953;Parent=Thaps41953;rank=2 chr11a . exon 118078 118395 . + . ID=Thaps41953.2;Parent=Thaps41953;constitutive=1;rank=2 chr11a . CDS 118476 118753 . + 0 ID=Thaps41953;Parent=Thaps41953;rank=3 chr11a . exon 118476 118753 . + . ID=Thaps41953.3;Parent=Thaps41953;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . exon 119864 119950 . - . ID=Thaps263755.2;Parent=Thaps263755;constitutive=1;rank=2 chr11a . exon 120014 120186 . - . ID=Thaps263755.1;Parent=Thaps263755;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 127276 128725 . - . ID=Thaps36614;biotype=protein_coding;description=Diaminopimelate epimerase [Source:UniProtKB/TrEMBL%3BAcc:B8LBN1];external_name=Thaps36614;logic_name=jgi_thaps3 chr11a ensembl transcript 127276 128725 . - . ID=Thaps36614;Parent=Thaps36614;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 127276 127862 . - 0 ID=Thaps36614;Parent=Thaps36614;rank=4 chr11a . exon 127276 127862 . - . ID=Thaps36614.4;Parent=Thaps36614;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 128024 128131 . - 0 ID=Thaps36614;Parent=Thaps36614;rank=3 chr11a . exon 128024 128131 . - . ID=Thaps36614.3;Parent=Thaps36614;constitutive=1;rank=3 chr11a . CDS 128292 128356 . - 0 ID=Thaps36614;Parent=Thaps36614;rank=2 chr11a . exon 128292 128356 . - . ID=Thaps36614.2;Parent=Thaps36614;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 128514 128725 . - 0 ID=Thaps36614;Parent=Thaps36614;rank=1 chr11a . exon 128514 128725 . - . ID=Thaps36614.1;Parent=Thaps36614;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 124327 126502 . - . ID=Thaps8649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBN0];external_name=Thaps8649;logic_name=jgi_thaps3 chr11a ensembl transcript 124327 126502 . - . ID=Thaps8649;Parent=Thaps8649;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 124327 124957 . - 0 ID=Thaps8649;Parent=Thaps8649;rank=3 chr11a . exon 124327 124957 . - . ID=Thaps8649.3;Parent=Thaps8649;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 125072 125313 . - 0 ID=Thaps8649;Parent=Thaps8649;rank=2 chr11a . exon 125072 125313 . - . ID=Thaps8649.2;Parent=Thaps8649;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 125393 126502 . - 0 ID=Thaps8649;Parent=Thaps8649;rank=1 chr11a . exon 125393 126502 . - . ID=Thaps8649.1;Parent=Thaps8649;constitutive=1;rank=1 chr11a . repeat_region 129424 129469 . ? . description=dust chr11a . repeat_region 138626 138653 . ? . description=trf chr11a . repeat_region 138626 138653 . ? . description=dust chr11a ensembl tRNA_gene 138303 138375 . + . ID=EPrTPOG00000000038;biotype=tRNA;description=tRNA-Asn for anticodon GUU [Source:TRNASCAN_SE%3BAcc:tRNA-Asn];external_name=tRNA-Asn;logic_name=ncrna_eg chr11a ensembl transcript 138303 138375 . + . ID=EPrTPOT00000000038;Parent=EPrTPOG00000000038;biotype=tRNA;logic_name=ncrna_eg chr11a . exon 138303 138375 . + . ID=EPrTPOE00000000038;Parent=EPrTPOT00000000038;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 130208 133231 . + . ID=Thaps24292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBN2];external_name=Thaps24292;logic_name=jgi_thaps3 chr11a ensembl transcript 130208 133231 . + . ID=Thaps24292;Parent=Thaps24292;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 130208 130518 . + 0 ID=Thaps24292;Parent=Thaps24292;rank=1 chr11a . exon 130208 130518 . + . ID=Thaps24292.1;Parent=Thaps24292;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 130653 130929 . + 0 ID=Thaps24292;Parent=Thaps24292;rank=2 chr11a . exon 130653 130929 . + . ID=Thaps24292.2;Parent=Thaps24292;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 131016 131371 . + 0 ID=Thaps24292;Parent=Thaps24292;rank=3 chr11a . exon 131016 131371 . + . ID=Thaps24292.3;Parent=Thaps24292;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 131528 132883 . + 0 ID=Thaps24292;Parent=Thaps24292;rank=4 chr11a . exon 131528 132883 . + . ID=Thaps24292.4;Parent=Thaps24292;constitutive=1;rank=4 chr11a . CDS 132985 133231 . + 0 ID=Thaps24292;Parent=Thaps24292;rank=5 chr11a . exon 132985 133231 . + . ID=Thaps24292.5;Parent=Thaps24292;constitutive=1;ensembl_end_phase=1;rank=5 chr11a ensembl protein_coding_gene 136974 138177 . - . ID=Thaps24293;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBN4];external_name=Thaps24293;logic_name=jgi_thaps3 chr11a ensembl transcript 136974 138177 . - . ID=Thaps24293;Parent=Thaps24293;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 136974 137463 . - 0 ID=Thaps24293;Parent=Thaps24293;rank=3 chr11a . exon 136974 137463 . - . ID=Thaps24293.3;Parent=Thaps24293;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 137562 137634 . - 0 ID=Thaps24293;Parent=Thaps24293;rank=2 chr11a . exon 137562 137634 . - . ID=Thaps24293.2;Parent=Thaps24293;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 137916 138177 . - 0 ID=Thaps24293;Parent=Thaps24293;rank=1 chr11a . exon 137916 138177 . - . ID=Thaps24293.1;Parent=Thaps24293;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 135552 136755 . + . ID=Thaps36631;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBN3];external_name=Thaps36631;logic_name=jgi_thaps3 chr11a ensembl transcript 135552 136755 . + . ID=Thaps36631;Parent=Thaps36631;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 135552 135848 . + 0 ID=Thaps36631;Parent=Thaps36631;rank=1 chr11a . exon 135552 135848 . + . ID=Thaps36631.1;Parent=Thaps36631;constitutive=1;rank=1 chr11a . CDS 135916 136755 . + 0 ID=Thaps36631;Parent=Thaps36631;rank=2 chr11a . exon 135916 136755 . + . ID=Thaps36631.2;Parent=Thaps36631;constitutive=1;rank=2 chr11a ensembl protein_coding_gene 138910 140266 . - . ID=Thaps8654;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBN5];external_name=Thaps8654;logic_name=jgi_thaps3 chr11a ensembl transcript 138910 140266 . - . ID=Thaps8654;Parent=Thaps8654;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 138910 139747 . - 0 ID=Thaps8654;Parent=Thaps8654;rank=2 chr11a . exon 138910 139747 . - . ID=Thaps8654.2;Parent=Thaps8654;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 139911 140266 . - 0 ID=Thaps8654;Parent=Thaps8654;rank=1 chr11a ensembl protein_coding_gene 144191 146321 . - . ID=Thaps36576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBN7];external_name=Thaps36576;logic_name=jgi_thaps3 chr11a ensembl transcript 144191 146321 . - . ID=Thaps36576;Parent=Thaps36576;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 144191 144431 . - 0 ID=Thaps36576;Parent=Thaps36576;rank=4 chr11a . exon 144191 144431 . - . ID=Thaps36576.4;Parent=Thaps36576;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 144512 145766 . - 0 ID=Thaps36576;Parent=Thaps36576;rank=3 chr11a . exon 144512 145766 . - . ID=Thaps36576.3;Parent=Thaps36576;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 145882 146015 . - 0 ID=Thaps36576;Parent=Thaps36576;rank=2 chr11a . exon 145882 146015 . - . ID=Thaps36576.2;Parent=Thaps36576;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 146119 146321 . - 0 ID=Thaps36576;Parent=Thaps36576;rank=1 chr11a . exon 146119 146321 . - . ID=Thaps36576.1;Parent=Thaps36576;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . exon 139911 140266 . - . ID=Thaps8654.1;Parent=Thaps8654;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 140737 143997 . + . ID=Thaps8655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBN6];external_name=Thaps8655;logic_name=jgi_thaps3 chr11a ensembl transcript 140737 143997 . + . ID=Thaps8655;Parent=Thaps8655;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 140737 143997 . + 0 ID=Thaps8655;Parent=Thaps8655;rank=1 chr11a . exon 140737 143997 . + . ID=Thaps8655.1;Parent=Thaps8655;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 147581 149287 . + . ID=Thaps8657;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBN8];external_name=Thaps8657;logic_name=jgi_thaps3 chr11a ensembl transcript 147581 149287 . + . ID=Thaps8657;Parent=Thaps8657;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 147581 149287 . + 0 ID=Thaps8657;Parent=Thaps8657;rank=1 chr11a . exon 147581 149287 . + . ID=Thaps8657.1;Parent=Thaps8657;constitutive=1;rank=1 chr11a . repeat_region 155154 155175 . ? . description=dust chr11a . repeat_region 155154 155180 . ? . description=trf chr11a . repeat_region 157944 157989 . ? . description=dust chr11a . repeat_region 159122 159148 . ? . description=dust chr11a . repeat_region 159122 159153 . ? . description=trf chr11a ensembl protein_coding_gene 151925 152125 . + . ID=Thaps20186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBN9];external_name=Thaps20186;logic_name=jgi_thaps3 chr11a ensembl transcript 151925 152125 . + . ID=Thaps20186;Parent=Thaps20186;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 151925 152125 . + 0 ID=Thaps20186;Parent=Thaps20186;rank=1 chr11a . exon 151925 152125 . + . ID=Thaps20186.1;Parent=Thaps20186;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 153064 154795 . - . ID=Thaps24294;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBP0];external_name=Thaps24294;logic_name=jgi_thaps3 chr11a ensembl transcript 153064 154795 . - . ID=Thaps24294;Parent=Thaps24294;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 153064 153646 . - 0 ID=Thaps24294;Parent=Thaps24294;rank=4 chr11a . exon 153064 153646 . - . ID=Thaps24294.4;Parent=Thaps24294;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 153719 153861 . - 0 ID=Thaps24294;Parent=Thaps24294;rank=3 chr11a . exon 153719 153861 . - . ID=Thaps24294.3;Parent=Thaps24294;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 153923 154087 . - 0 ID=Thaps24294;Parent=Thaps24294;rank=2 chr11a . exon 153923 154087 . - . ID=Thaps24294.2;Parent=Thaps24294;constitutive=1;rank=2 chr11a . CDS 154247 154795 . - 0 ID=Thaps24294;Parent=Thaps24294;rank=1 chr11a . exon 154247 154795 . - . ID=Thaps24294.1;Parent=Thaps24294;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 154986 158561 . + . ID=Thaps24295;biotype=protein_coding;description=26S proteasome regulatory subunit Rpn2 26S subunit%2C non-atpase [Source:UniProtKB/TrEMBL%3BAcc:B8LBP1];external_name=RPN2;logic_name=jgi_thaps3 chr11a ensembl transcript 154986 158561 . + . ID=Thaps24295;Parent=Thaps24295;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 154986 156490 . + 0 ID=Thaps24295;Parent=Thaps24295;rank=1 chr11a . exon 154986 156490 . + . ID=Thaps24295.1;Parent=Thaps24295;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 156600 157244 . + 0 ID=Thaps24295;Parent=Thaps24295;rank=2 chr11a . exon 156600 157244 . + . ID=Thaps24295.2;Parent=Thaps24295;constitutive=1;rank=2 chr11a . CDS 157319 158561 . + 0 ID=Thaps24295;Parent=Thaps24295;rank=3 chr11a . exon 157319 158561 . + . ID=Thaps24295.3;Parent=Thaps24295;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . repeat_region 169952 170001 . ? . description=trf chr11a . repeat_region 174460 174489 . ? . description=dust chr11a . repeat_region 178349 178375 . ? . description=trf chr11a . repeat_region 178703 178736 . ? . description=trf chr11a ensembl tRNA_gene 174356 174460 . + . ID=EPrTPOG00000000010;biotype=tRNA;description=tRNA-Thr for anticodon UGU [Source:TRNASCAN_SE%3BAcc:tRNA-Thr];external_name=tRNA-Thr;logic_name=ncrna_eg chr11a ensembl transcript 174356 174460 . + . ID=EPrTPOT00000000031;Parent=EPrTPOG00000000010;biotype=tRNA;logic_name=ncrna_eg chr11a ensembl tRNA_gene 170215 170287 . - . ID=EPrTPOG00000000058;biotype=tRNA;description=tRNA-Asn for anticodon GUU [Source:TRNASCAN_SE%3BAcc:tRNA-Asn];external_name=tRNA-Asn;logic_name=ncrna_eg chr11a ensembl transcript 170215 170287 . - . ID=EPrTPOT00000000058;Parent=EPrTPOG00000000058;biotype=tRNA;logic_name=ncrna_eg chr11a . exon 174356 174460 . + . ID=EPrTPOE00000000010;Parent=EPrTPOT00000000031;constitutive=1;rank=1 chr11a . exon 170215 170287 . - . ID=EPrTPOE00000000058;Parent=EPrTPOT00000000058;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 174699 175828 . - . ID=Thaps24300;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBP4];external_name=Thaps24300;logic_name=jgi_thaps3 chr11a ensembl transcript 174699 175828 . - . ID=Thaps24300;Parent=Thaps24300;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 174699 175069 . - 0 ID=Thaps24300;Parent=Thaps24300;rank=2 chr11a . exon 174699 175069 . - . ID=Thaps24300.2;Parent=Thaps24300;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 175189 175828 . - 0 ID=Thaps24300;Parent=Thaps24300;rank=1 chr11a . exon 175189 175828 . - . ID=Thaps24300.1;Parent=Thaps24300;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 170404 172772 . + . ID=Thaps269556;biotype=protein_coding;description=Dead box family RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8LBP2];external_name=Thaps269556;logic_name=jgi_thaps3 chr11a ensembl transcript 170404 172772 . + . ID=Thaps269556;Parent=Thaps269556;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 170404 170516 . + 0 ID=Thaps269556;Parent=Thaps269556;rank=1 chr11a . exon 170404 170516 . + . ID=Thaps269556.1;Parent=Thaps269556;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 171584 172772 . + 0 ID=Thaps269556;Parent=Thaps269556;rank=2 chr11a . exon 171584 172772 . + . ID=Thaps269556.2;Parent=Thaps269556;constitutive=1;ensembl_end_phase=1;rank=2 chr11a ensembl protein_coding_gene 173029 174227 . - . ID=Thaps8667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBP3];external_name=Thaps8667;logic_name=jgi_thaps3 chr11a ensembl transcript 173029 174227 . - . ID=Thaps8667;Parent=Thaps8667;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 173029 174227 . - 0 ID=Thaps8667;Parent=Thaps8667;rank=1 chr11a . exon 173029 174227 . - . ID=Thaps8667.1;Parent=Thaps8667;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 176809 178465 . + . ID=Thaps8669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBP5];external_name=Thaps8669;logic_name=jgi_thaps3 chr11a ensembl transcript 176809 178465 . + . ID=Thaps8669;Parent=Thaps8669;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 176809 177485 . + 0 ID=Thaps8669;Parent=Thaps8669;rank=1 chr11a . exon 176809 177485 . + . ID=Thaps8669.1;Parent=Thaps8669;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 177592 178465 . + 0 ID=Thaps8669;Parent=Thaps8669;rank=2 chr11a . exon 177592 178465 . + . ID=Thaps8669.2;Parent=Thaps8669;constitutive=1;ensembl_end_phase=1;rank=2 chr11a ensembl protein_coding_gene 178800 179162 . + . ID=Thaps8670;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBP6];external_name=Thaps8670;logic_name=jgi_thaps3 chr11a ensembl transcript 178800 179162 . + . ID=Thaps8670;Parent=Thaps8670;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 178800 179162 . + 0 ID=Thaps8670;Parent=Thaps8670;rank=1 chr11a . exon 178800 179162 . + . ID=Thaps8670.1;Parent=Thaps8670;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 185671 186441 . - . ID=Thaps269557;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ0];external_name=Thaps269557;logic_name=jgi_thaps3 chr11a ensembl transcript 185671 186441 . - . ID=Thaps269557;Parent=Thaps269557;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 185671 186441 . - 0 ID=Thaps269557;Parent=Thaps269557;rank=1 chr11a . exon 185671 186441 . - . ID=Thaps269557.1;Parent=Thaps269557;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 179507 181191 . - . ID=Thaps36673;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBP7];external_name=Thaps36673;logic_name=jgi_thaps3 chr11a ensembl transcript 179507 181191 . - . ID=Thaps36673;Parent=Thaps36673;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 179507 179749 . - 0 ID=Thaps36673;Parent=Thaps36673;rank=4 chr11a . exon 179507 179749 . - . ID=Thaps36673.4;Parent=Thaps36673;constitutive=1;rank=4 chr11a . CDS 179855 180069 . - 0 ID=Thaps36673;Parent=Thaps36673;rank=3 chr11a . exon 179855 180069 . - . ID=Thaps36673.3;Parent=Thaps36673;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 180294 180742 . - 0 ID=Thaps36673;Parent=Thaps36673;rank=2 chr11a . exon 180294 180742 . - . ID=Thaps36673.2;Parent=Thaps36673;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 180851 181191 . - 0 ID=Thaps36673;Parent=Thaps36673;rank=1 chr11a . exon 180851 181191 . - . ID=Thaps36673.1;Parent=Thaps36673;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 181718 182482 . + . ID=Thaps8672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBP8];external_name=Thaps8672;logic_name=jgi_thaps3 chr11a ensembl transcript 181718 182482 . + . ID=Thaps8672;Parent=Thaps8672;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 181718 182482 . + 0 ID=Thaps8672;Parent=Thaps8672;rank=1 chr11a . exon 181718 182482 . + . ID=Thaps8672.1;Parent=Thaps8672;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 182756 183960 . - . ID=Thaps8673;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBP9];external_name=Thaps8673;logic_name=jgi_thaps3 chr11a ensembl transcript 182756 183960 . - . ID=Thaps8673;Parent=Thaps8673;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 182756 182841 . - 0 ID=Thaps8673;Parent=Thaps8673;rank=3 chr11a . exon 182756 182841 . - . ID=Thaps8673.3;Parent=Thaps8673;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 182925 183184 . - 0 ID=Thaps8673;Parent=Thaps8673;rank=2 chr11a . exon 182925 183184 . - . ID=Thaps8673.2;Parent=Thaps8673;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 183374 183960 . - 0 ID=Thaps8673;Parent=Thaps8673;rank=1 chr11a . exon 183374 183960 . - . ID=Thaps8673.1;Parent=Thaps8673;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 186771 187409 . + . ID=Thaps8675;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ1];external_name=Thaps8675;logic_name=jgi_thaps3 chr11a ensembl transcript 186771 187409 . + . ID=Thaps8675;Parent=Thaps8675;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 186771 187409 . + 0 ID=Thaps8675;Parent=Thaps8675;rank=1 chr11a . exon 186771 187409 . + . ID=Thaps8675.1;Parent=Thaps8675;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 188210 188917 . + . ID=Thaps8676;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ2];external_name=Thaps8676;logic_name=jgi_thaps3 chr11a ensembl transcript 188210 188917 . + . ID=Thaps8676;Parent=Thaps8676;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 188210 188917 . + 0 ID=Thaps8676;Parent=Thaps8676;rank=1 chr11a . exon 188210 188917 . + . ID=Thaps8676.1;Parent=Thaps8676;constitutive=1;rank=1 chr11a . repeat_region 190569 190581 . ? . description=dust chr11a . repeat_region 198461 198494 . ? . description=dust chr11a . repeat_region 198463 198489 . ? . description=trf chr11a ensembl tRNA_gene 191337 191431 . - . ID=EPrTPOG00000000121;biotype=tRNA;description=tRNA-Thr for anticodon UGU [Source:TRNASCAN_SE%3BAcc:tRNA-Thr];external_name=tRNA-Thr;logic_name=ncrna_eg chr11a ensembl transcript 191337 191431 . - . ID=EPrTPOT00000000121;Parent=EPrTPOG00000000121;biotype=tRNA;logic_name=ncrna_eg chr11a . exon 191337 191431 . - . ID=EPrTPOE00000000121;Parent=EPrTPOT00000000121;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 191817 193976 . - . ID=Thaps24303;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ4];external_name=Thaps24303;logic_name=jgi_thaps3 chr11a ensembl transcript 191817 193976 . - . ID=Thaps24303;Parent=Thaps24303;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 191817 193976 . - 0 ID=Thaps24303;Parent=Thaps24303;rank=1 chr11a . exon 191817 193976 . - . ID=Thaps24303.1;Parent=Thaps24303;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 189454 190641 . - . ID=Thaps36656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ3];external_name=Thaps36656;logic_name=jgi_thaps3 chr11a ensembl transcript 189454 190641 . - . ID=Thaps36656;Parent=Thaps36656;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 189454 189755 . - 0 ID=Thaps36656;Parent=Thaps36656;rank=2 chr11a . exon 189454 189755 . - . ID=Thaps36656.2;Parent=Thaps36656;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 189882 190641 . - 0 ID=Thaps36656;Parent=Thaps36656;rank=1 chr11a . exon 189882 190641 . - . ID=Thaps36656.1;Parent=Thaps36656;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 194231 195955 . + . ID=Thaps8679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ5];external_name=Thaps8679;logic_name=jgi_thaps3 chr11a ensembl transcript 194231 195955 . + . ID=Thaps8679;Parent=Thaps8679;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 194231 195620 . + 0 ID=Thaps8679;Parent=Thaps8679;rank=1 chr11a . exon 194231 195620 . + . ID=Thaps8679.1;Parent=Thaps8679;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 195714 195955 . + 0 ID=Thaps8679;Parent=Thaps8679;rank=2 chr11a . exon 195714 195955 . + . ID=Thaps8679.2;Parent=Thaps8679;constitutive=1;ensembl_end_phase=2;rank=2 chr11a ensembl protein_coding_gene 196351 198082 . - . ID=Thaps8680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ6];external_name=Thaps8680;logic_name=jgi_thaps3 chr11a ensembl transcript 196351 198082 . - . ID=Thaps8680;Parent=Thaps8680;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 196351 196928 . - 0 ID=Thaps8680;Parent=Thaps8680;rank=4 chr11a . exon 196351 196928 . - . ID=Thaps8680.4;Parent=Thaps8680;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 197007 197049 . - 0 ID=Thaps8680;Parent=Thaps8680;rank=3 chr11a . exon 197007 197049 . - . ID=Thaps8680.3;Parent=Thaps8680;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 197119 197176 . - 0 ID=Thaps8680;Parent=Thaps8680;rank=2 chr11a . exon 197119 197176 . - . ID=Thaps8680.2;Parent=Thaps8680;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 197544 198082 . - 0 ID=Thaps8680;Parent=Thaps8680;rank=1 chr11a . exon 197544 198082 . - . ID=Thaps8680.1;Parent=Thaps8680;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 201788 204861 . + . ID=Thaps24304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ8];external_name=Thaps24304;logic_name=jgi_thaps3 chr11a ensembl transcript 201788 204861 . + . ID=Thaps24304;Parent=Thaps24304;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 201788 203401 . + 0 ID=Thaps24304;Parent=Thaps24304;rank=1 chr11a . exon 201788 203401 . + . ID=Thaps24304.1;Parent=Thaps24304;constitutive=1;rank=1 chr11a . CDS 203499 203873 . + 0 ID=Thaps24304;Parent=Thaps24304;rank=2 chr11a . exon 203499 203873 . + . ID=Thaps24304.2;Parent=Thaps24304;constitutive=1;rank=2 chr11a . CDS 203974 204861 . + 0 ID=Thaps24304;Parent=Thaps24304;rank=3 chr11a . exon 203974 204861 . + . ID=Thaps24304.3;Parent=Thaps24304;constitutive=1;rank=3 chr11a ensembl protein_coding_gene 206076 208523 . - . ID=Thaps24305;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ9];external_name=Thaps24305;logic_name=jgi_thaps3 chr11a ensembl transcript 206076 208523 . - . ID=Thaps24305;Parent=Thaps24305;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 206076 206250 . - 0 ID=Thaps24305;Parent=Thaps24305;rank=4 chr11a . exon 206076 206250 . - . ID=Thaps24305.4;Parent=Thaps24305;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 206341 206366 . - 0 ID=Thaps24305;Parent=Thaps24305;rank=3 chr11a . exon 206341 206366 . - . ID=Thaps24305.3;Parent=Thaps24305;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 206463 207929 . - 0 ID=Thaps24305;Parent=Thaps24305;rank=2 chr11a . exon 206463 207929 . - . ID=Thaps24305.2;Parent=Thaps24305;constitutive=1;rank=2 chr11a . CDS 208062 208523 . - 0 ID=Thaps24305;Parent=Thaps24305;rank=1 chr11a . exon 208062 208523 . - . ID=Thaps24305.1;Parent=Thaps24305;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 200341 201064 . - . ID=Thaps263766;biotype=protein_coding;description=Transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LBQ7];external_name=Thaps263766;logic_name=jgi_thaps3 chr11a ensembl transcript 200341 201064 . - . ID=Thaps263766;Parent=Thaps263766;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 200341 200712 . - 0 ID=Thaps263766;Parent=Thaps263766;rank=2 chr11a . exon 200341 200712 . - . ID=Thaps263766.2;Parent=Thaps263766;constitutive=1;rank=2 chr11a . CDS 200814 201064 . - 0 ID=Thaps263766;Parent=Thaps263766;rank=1 chr11a . exon 200814 201064 . - . ID=Thaps263766.1;Parent=Thaps263766;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . repeat_region 209759 209783 . ? . description=trf chr11a . repeat_region 209759 209783 . ? . description=dust chr11a ensembl protein_coding_gene 212668 213699 . - . ID=Thaps24307;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR2];external_name=Thaps24307;logic_name=jgi_thaps3 chr11a ensembl transcript 212668 213699 . - . ID=Thaps24307;Parent=Thaps24307;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 212668 212703 . - 0 ID=Thaps24307;Parent=Thaps24307;rank=4 chr11a . exon 212668 212703 . - . ID=Thaps24307.4;Parent=Thaps24307;constitutive=1;rank=4 chr11a . CDS 212746 212970 . - 0 ID=Thaps24307;Parent=Thaps24307;rank=3 chr11a . exon 212746 212970 . - . ID=Thaps24307.3;Parent=Thaps24307;constitutive=1;rank=3 chr11a . CDS 213045 213232 . - 0 ID=Thaps24307;Parent=Thaps24307;rank=2 chr11a . exon 213045 213232 . - . ID=Thaps24307.2;Parent=Thaps24307;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 213339 213699 . - 0 ID=Thaps24307;Parent=Thaps24307;rank=1 chr11a . exon 213339 213699 . - . ID=Thaps24307.1;Parent=Thaps24307;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 211335 212577 . + . ID=Thaps36599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR1];external_name=Thaps36599;logic_name=jgi_thaps3 chr11a ensembl transcript 211335 212577 . + . ID=Thaps36599;Parent=Thaps36599;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 211335 211660 . + 0 ID=Thaps36599;Parent=Thaps36599;rank=1 chr11a . exon 211335 211660 . + . ID=Thaps36599.1;Parent=Thaps36599;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 211806 212069 . + 0 ID=Thaps36599;Parent=Thaps36599;rank=2 chr11a . exon 211806 212069 . + . ID=Thaps36599.2;Parent=Thaps36599;constitutive=1;rank=2 chr11a . CDS 212160 212577 . + 0 ID=Thaps36599;Parent=Thaps36599;rank=3 chr11a . exon 212160 212577 . + . ID=Thaps36599.3;Parent=Thaps36599;constitutive=1;ensembl_end_phase=1;rank=3 chr11a ensembl protein_coding_gene 210210 210449 . + . ID=Thaps36634;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR0];external_name=Thaps36634;logic_name=jgi_thaps3 chr11a ensembl transcript 210210 210449 . + . ID=Thaps36634;Parent=Thaps36634;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 210210 210449 . + 0 ID=Thaps36634;Parent=Thaps36634;rank=1 chr11a . exon 210210 210449 . + . ID=Thaps36634.1;Parent=Thaps36634;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 217388 220145 . + . ID=Thaps8686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR3];external_name=Thaps8686;logic_name=jgi_thaps3 chr11a ensembl transcript 217388 220145 . + . ID=Thaps8686;Parent=Thaps8686;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 217388 217435 . + 0 ID=Thaps8686;Parent=Thaps8686;rank=1 chr11a . exon 217388 217435 . + . ID=Thaps8686.1;Parent=Thaps8686;constitutive=1;rank=1 chr11a . CDS 217531 217623 . + 0 ID=Thaps8686;Parent=Thaps8686;rank=2 chr11a . exon 217531 217623 . + . ID=Thaps8686.2;Parent=Thaps8686;constitutive=1;rank=2 chr11a . CDS 217716 219791 . + 0 ID=Thaps8686;Parent=Thaps8686;rank=3 chr11a . exon 217716 219791 . + . ID=Thaps8686.3;Parent=Thaps8686;constitutive=1;rank=3 chr11a . CDS 219879 220145 . + 0 ID=Thaps8686;Parent=Thaps8686;rank=4 chr11a ensembl protein_coding_gene 222126 222938 . - . ID=Thaps24309;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR5];external_name=Thaps24309;logic_name=jgi_thaps3 chr11a ensembl transcript 222126 222938 . - . ID=Thaps24309;Parent=Thaps24309;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 222126 222938 . - 0 ID=Thaps24309;Parent=Thaps24309;rank=1 chr11a . exon 222126 222938 . - . ID=Thaps24309.1;Parent=Thaps24309;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 225005 225407 . - . ID=Thaps263770;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR7];external_name=Thaps263770;logic_name=jgi_thaps3 chr11a ensembl transcript 225005 225407 . - . ID=Thaps263770;Parent=Thaps263770;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 225005 225407 . - 0 ID=Thaps263770;Parent=Thaps263770;rank=1 chr11a . exon 225005 225407 . - . ID=Thaps263770.1;Parent=Thaps263770;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 221231 221845 . + . ID=Thaps269559;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR4];external_name=Thaps269559;logic_name=jgi_thaps3 chr11a ensembl transcript 221231 221845 . + . ID=Thaps269559;Parent=Thaps269559;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 221231 221845 . + 0 ID=Thaps269559;Parent=Thaps269559;rank=1 chr11a . exon 221231 221845 . + . ID=Thaps269559.1;Parent=Thaps269559;constitutive=1;rank=1 chr11a . exon 219879 220145 . + . ID=Thaps8686.4;Parent=Thaps8686;constitutive=1;rank=4 chr11a ensembl protein_coding_gene 223402 224394 . + . ID=Thaps8689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR6];external_name=Thaps8689;logic_name=jgi_thaps3 chr11a ensembl transcript 223402 224394 . + . ID=Thaps8689;Parent=Thaps8689;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 223402 224394 . + 0 ID=Thaps8689;Parent=Thaps8689;rank=1 chr11a . exon 223402 224394 . + . ID=Thaps8689.1;Parent=Thaps8689;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 226284 226724 . - . ID=Thaps8691;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR8];external_name=Thaps8691;logic_name=jgi_thaps3 chr11a ensembl transcript 226284 226724 . - . ID=Thaps8691;Parent=Thaps8691;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 226284 226724 . - 0 ID=Thaps8691;Parent=Thaps8691;rank=1 chr11a . exon 226284 226724 . - . ID=Thaps8691.1;Parent=Thaps8691;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 226980 227477 . + . ID=Thaps8692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBR9];external_name=Thaps8692;logic_name=jgi_thaps3 chr11a ensembl transcript 226980 227477 . + . ID=Thaps8692;Parent=Thaps8692;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 226980 227477 . + 0 ID=Thaps8692;Parent=Thaps8692;rank=1 chr11a . exon 226980 227477 . + . ID=Thaps8692.1;Parent=Thaps8692;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 227872 228321 . - . ID=Thaps8693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBS0];external_name=Thaps8693;logic_name=jgi_thaps3 chr11a ensembl transcript 227872 228321 . - . ID=Thaps8693;Parent=Thaps8693;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 227872 228321 . - 0 ID=Thaps8693;Parent=Thaps8693;rank=1 chr11a . exon 227872 228321 . - . ID=Thaps8693.1;Parent=Thaps8693;constitutive=1;rank=1 chr11a . repeat_region 233714 233729 . ? . description=dust chr11a ensembl protein_coding_gene 238087 241156 . + . ID=Thaps24311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBS2];external_name=Thaps24311;logic_name=jgi_thaps3 chr11a ensembl transcript 238087 241156 . + . ID=Thaps24311;Parent=Thaps24311;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 238087 238363 . + 0 ID=Thaps24311;Parent=Thaps24311;rank=1 chr11a . exon 238087 238363 . + . ID=Thaps24311.1;Parent=Thaps24311;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 238714 238736 . + 0 ID=Thaps24311;Parent=Thaps24311;rank=2 chr11a . exon 238714 238736 . + . ID=Thaps24311.2;Parent=Thaps24311;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 239075 241156 . + 0 ID=Thaps24311;Parent=Thaps24311;rank=3 chr11a ensembl protein_coding_gene 235278 236243 . + . ID=Thaps36609;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBS1];external_name=Thaps36609;logic_name=jgi_thaps3 chr11a ensembl transcript 235278 236243 . + . ID=Thaps36609;Parent=Thaps36609;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 235278 236243 . + 0 ID=Thaps36609;Parent=Thaps36609;rank=1 chr11a . exon 235278 236243 . + . ID=Thaps36609.1;Parent=Thaps36609;constitutive=1;rank=1 chr11a . repeat_region 244947 244968 . ? . description=trf chr11a . repeat_region 245741 245764 . ? . description=trf chr11a . exon 239075 241156 . + . ID=Thaps24311.3;Parent=Thaps24311;constitutive=1;rank=3 chr11a ensembl protein_coding_gene 241452 241802 . + . ID=Thaps24312;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBS3];external_name=Thaps24312;logic_name=jgi_thaps3 chr11a ensembl transcript 241452 241802 . + . ID=Thaps24312;Parent=Thaps24312;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 241452 241802 . + 0 ID=Thaps24312;Parent=Thaps24312;rank=1 chr11a . exon 241452 241802 . + . ID=Thaps24312.1;Parent=Thaps24312;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 244973 246637 . + . ID=Thaps24313;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBS5];external_name=Thaps24313;logic_name=jgi_thaps3 chr11a ensembl transcript 244973 246637 . + . ID=Thaps24313;Parent=Thaps24313;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 244973 246637 . + 0 ID=Thaps24313;Parent=Thaps24313;rank=1 chr11a . exon 244973 246637 . + . ID=Thaps24313.1;Parent=Thaps24313;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 242029 244104 . - . ID=Thaps8698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBS4];external_name=Thaps8698;logic_name=jgi_thaps3 chr11a ensembl transcript 242029 244104 . - . ID=Thaps8698;Parent=Thaps8698;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 242029 244104 . - 0 ID=Thaps8698;Parent=Thaps8698;rank=1 chr11a . exon 242029 244104 . - . ID=Thaps8698.1;Parent=Thaps8698;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 246987 248081 . - . ID=Thaps8700;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBS6];external_name=Thaps8700;logic_name=jgi_thaps3 chr11a ensembl transcript 246987 248081 . - . ID=Thaps8700;Parent=Thaps8700;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 246987 248081 . - 0 ID=Thaps8700;Parent=Thaps8700;rank=1 chr11a . exon 246987 248081 . - . ID=Thaps8700.1;Parent=Thaps8700;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 248659 251380 . + . ID=Thaps8701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBS7];external_name=Thaps8701;logic_name=jgi_thaps3 chr11a ensembl transcript 248659 251380 . + . ID=Thaps8701;Parent=Thaps8701;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 248659 249940 . + 0 ID=Thaps8701;Parent=Thaps8701;rank=1 chr11a . exon 248659 249940 . + . ID=Thaps8701.1;Parent=Thaps8701;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 250281 251380 . + 0 ID=Thaps8701;Parent=Thaps8701;rank=2 chr11a . repeat_region 252926 253056 . - . description=MuDR1_TP chr11a . repeat_region 258546 258566 . ? . description=dust chr11a ensembl protein_coding_gene 254174 255151 . - . ID=Thaps36582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBS8];external_name=Thaps36582;logic_name=jgi_thaps3 chr11a ensembl transcript 254174 255151 . - . ID=Thaps36582;Parent=Thaps36582;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 254174 255151 . - 0 ID=Thaps36582;Parent=Thaps36582;rank=1 chr11a . exon 254174 255151 . - . ID=Thaps36582.1;Parent=Thaps36582;constitutive=1;rank=1 chr11a . exon 250281 251380 . + . ID=Thaps8701.2;Parent=Thaps8701;constitutive=1;ensembl_end_phase=2;rank=2 chr11a ensembl protein_coding_gene 255967 257166 . + . ID=Thaps8703;biotype=protein_coding;description=Myo-inositol 2-dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8LBS9];external_name=Thaps8703;logic_name=jgi_thaps3 chr11a ensembl transcript 255967 257166 . + . ID=Thaps8703;Parent=Thaps8703;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 255967 256134 . + 0 ID=Thaps8703;Parent=Thaps8703;rank=1 chr11a . exon 255967 256134 . + . ID=Thaps8703.1;Parent=Thaps8703;constitutive=1;rank=1 chr11a . CDS 256219 256747 . + 0 ID=Thaps8703;Parent=Thaps8703;rank=2 chr11a . exon 256219 256747 . + . ID=Thaps8703.2;Parent=Thaps8703;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 256829 257166 . + 0 ID=Thaps8703;Parent=Thaps8703;rank=3 chr11a . exon 256829 257166 . + . ID=Thaps8703.3;Parent=Thaps8703;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . repeat_region 267243 267281 . ? . description=trf chr11a ensembl protein_coding_gene 259960 261538 . - . ID=Thaps8704;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBT0];external_name=Thaps8704;logic_name=jgi_thaps3 chr11a ensembl transcript 259960 261538 . - . ID=Thaps8704;Parent=Thaps8704;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 259960 259992 . - 0 ID=Thaps8704;Parent=Thaps8704;rank=9 chr11a . exon 259960 259992 . - . ID=Thaps8704.9;Parent=Thaps8704;constitutive=1;rank=9 chr11a . CDS 260022 260045 . - 0 ID=Thaps8704;Parent=Thaps8704;rank=8 chr11a . exon 260022 260045 . - . ID=Thaps8704.8;Parent=Thaps8704;constitutive=1;rank=8 chr11a . CDS 260130 260194 . - 0 ID=Thaps8704;Parent=Thaps8704;rank=7 chr11a . exon 260130 260194 . - . ID=Thaps8704.7;Parent=Thaps8704;constitutive=1;ensembl_end_phase=2;rank=7 chr11a . CDS 260283 260396 . - 0 ID=Thaps8704;Parent=Thaps8704;rank=6 chr11a . exon 260283 260396 . - . ID=Thaps8704.6;Parent=Thaps8704;constitutive=1;rank=6 chr11a . CDS 260491 260578 . - 0 ID=Thaps8704;Parent=Thaps8704;rank=5 chr11a . exon 260491 260578 . - . ID=Thaps8704.5;Parent=Thaps8704;constitutive=1;ensembl_end_phase=1;rank=5 chr11a . CDS 260780 260808 . - 0 ID=Thaps8704;Parent=Thaps8704;rank=4 chr11a . exon 260780 260808 . - . ID=Thaps8704.4;Parent=Thaps8704;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 260900 261025 . - 0 ID=Thaps8704;Parent=Thaps8704;rank=3 chr11a . exon 260900 261025 . - . ID=Thaps8704.3;Parent=Thaps8704;constitutive=1;rank=3 chr11a . CDS 261120 261207 . - 0 ID=Thaps8704;Parent=Thaps8704;rank=2 chr11a . exon 261120 261207 . - . ID=Thaps8704.2;Parent=Thaps8704;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 261329 261538 . - 0 ID=Thaps8704;Parent=Thaps8704;rank=1 chr11a . exon 261329 261538 . - . ID=Thaps8704.1;Parent=Thaps8704;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 264219 265019 . - . ID=Thaps8705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBT1];external_name=Thaps8705;logic_name=jgi_thaps3 chr11a ensembl transcript 264219 265019 . - . ID=Thaps8705;Parent=Thaps8705;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 264219 265019 . - 0 ID=Thaps8705;Parent=Thaps8705;rank=1 chr11a . exon 264219 265019 . - . ID=Thaps8705.1;Parent=Thaps8705;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 265485 267914 . + . ID=Thaps8706;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBT2];external_name=Thaps8706;logic_name=jgi_thaps3 chr11a ensembl transcript 265485 267914 . + . ID=Thaps8706;Parent=Thaps8706;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 265485 267914 . + 0 ID=Thaps8706;Parent=Thaps8706;rank=1 chr11a . exon 265485 267914 . + . ID=Thaps8706.1;Parent=Thaps8706;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 268030 268563 . - . ID=Thaps8707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBT3];external_name=Thaps8707;logic_name=jgi_thaps3 chr11a ensembl transcript 268030 268563 . - . ID=Thaps8707;Parent=Thaps8707;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 268030 268563 . - 0 ID=Thaps8707;Parent=Thaps8707;rank=1 chr11a . exon 268030 268563 . - . ID=Thaps8707.1;Parent=Thaps8707;constitutive=1;rank=1 chr11a . repeat_region 270305 270332 . ? . description=dust chr11a . repeat_region 272342 272349 . ? . description=dust chr11a . repeat_region 272557 272585 . ? . description=dust chr11a . repeat_region 272811 272840 . ? . description=dust chr11a . repeat_region 274043 274138 . ? . description=dust chr11a ensembl protein_coding_gene 273366 278087 . + . ID=Thaps24314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBT5];external_name=Thaps24314;logic_name=jgi_thaps3 chr11a ensembl transcript 273366 278087 . + . ID=Thaps24314;Parent=Thaps24314;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 273366 278087 . + 0 ID=Thaps24314;Parent=Thaps24314;rank=1 chr11a . exon 273366 278087 . + . ID=Thaps24314.1;Parent=Thaps24314;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 278227 279462 . - . ID=Thaps24315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBT6];external_name=Thaps24315;logic_name=jgi_thaps3 chr11a ensembl transcript 278227 279462 . - . ID=Thaps24315;Parent=Thaps24315;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 278227 279111 . - 0 ID=Thaps24315;Parent=Thaps24315;rank=2 chr11a . exon 278227 279111 . - . ID=Thaps24315.2;Parent=Thaps24315;constitutive=1;rank=2 chr11a . CDS 279208 279462 . - 0 ID=Thaps24315;Parent=Thaps24315;rank=1 chr11a ensembl protein_coding_gene 270844 272104 . - . ID=Thaps36572;biotype=protein_coding;description=Dimeric dihydrodiol dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8LBT4];external_name=Thaps36572;logic_name=jgi_thaps3 chr11a ensembl transcript 270844 272104 . - . ID=Thaps36572;Parent=Thaps36572;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 270844 271220 . - 0 ID=Thaps36572;Parent=Thaps36572;rank=4 chr11a . exon 270844 271220 . - . ID=Thaps36572.4;Parent=Thaps36572;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 271254 271549 . - 0 ID=Thaps36572;Parent=Thaps36572;rank=3 chr11a . exon 271254 271549 . - . ID=Thaps36572.3;Parent=Thaps36572;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 271636 271907 . - 0 ID=Thaps36572;Parent=Thaps36572;rank=2 chr11a . exon 271636 271907 . - . ID=Thaps36572.2;Parent=Thaps36572;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 272024 272104 . - 0 ID=Thaps36572;Parent=Thaps36572;rank=1 chr11a . exon 272024 272104 . - . ID=Thaps36572.1;Parent=Thaps36572;constitutive=1;rank=1 chr11a . repeat_region 281495 281526 . ? . description=trf chr11a . exon 279208 279462 . - . ID=Thaps24315.1;Parent=Thaps24315;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 286159 286995 . - . ID=Thaps263776;biotype=protein_coding;description=Myo-inositol-phosphatase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBT8];external_name=Thaps263776;logic_name=jgi_thaps3 chr11a ensembl transcript 286159 286995 . - . ID=Thaps263776;Parent=Thaps263776;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 286159 286995 . - 0 ID=Thaps263776;Parent=Thaps263776;rank=1 chr11a . exon 286159 286995 . - . ID=Thaps263776.1;Parent=Thaps263776;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 279794 282224 . + . ID=Thaps8711;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBT7];external_name=Thaps8711;logic_name=jgi_thaps3 chr11a ensembl transcript 279794 282224 . + . ID=Thaps8711;Parent=Thaps8711;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 279794 281476 . + 0 ID=Thaps8711;Parent=Thaps8711;rank=1 chr11a . exon 279794 281476 . + . ID=Thaps8711.1;Parent=Thaps8711;constitutive=1;rank=1 chr11a . CDS 281559 282224 . + 0 ID=Thaps8711;Parent=Thaps8711;rank=2 chr11a . exon 281559 282224 . + . ID=Thaps8711.2;Parent=Thaps8711;constitutive=1;rank=2 chr11a . repeat_region 289454 289468 . ? . description=dust chr11a . repeat_region 289548 289555 . ? . description=dust chr11a . repeat_region 291395 291458 . ? . description=dust chr11a . biological_region 294887 294888 0.999 + . logic_name=eponine chr11a ensembl protein_coding_gene 290645 291445 . - . ID=Thaps24318;biotype=protein_coding;description=Proteasome subunit beta type [Source:UniProtKB/TrEMBL%3BAcc:B8LBU0];external_name=PSB_3;logic_name=jgi_thaps3 chr11a ensembl transcript 290645 291445 . - . ID=Thaps24318;Parent=Thaps24318;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 290645 291445 . - 0 ID=Thaps24318;Parent=Thaps24318;rank=1 chr11a . exon 290645 291445 . - . ID=Thaps24318.1;Parent=Thaps24318;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 293057 295244 . - . ID=Thaps24319;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBU2];external_name=Thaps24319;logic_name=jgi_thaps3 chr11a ensembl transcript 293057 295244 . - . ID=Thaps24319;Parent=Thaps24319;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 293057 294597 . - 0 ID=Thaps24319;Parent=Thaps24319;rank=2 chr11a . exon 293057 294597 . - . ID=Thaps24319.2;Parent=Thaps24319;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 294680 295244 . - 0 ID=Thaps24319;Parent=Thaps24319;rank=1 chr11a . exon 294680 295244 . - . ID=Thaps24319.1;Parent=Thaps24319;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 296541 299955 . - . ID=Thaps24320;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBU3];external_name=Thaps24320;logic_name=jgi_thaps3 chr11a ensembl transcript 296541 299955 . - . ID=Thaps24320;Parent=Thaps24320;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 296541 296875 . - 0 ID=Thaps24320;Parent=Thaps24320;rank=4 chr11a . exon 296541 296875 . - . ID=Thaps24320.4;Parent=Thaps24320;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 297541 298677 . - 0 ID=Thaps24320;Parent=Thaps24320;rank=3 chr11a . exon 297541 298677 . - . ID=Thaps24320.3;Parent=Thaps24320;constitutive=1;rank=3 chr11a . CDS 298748 298876 . - 0 ID=Thaps24320;Parent=Thaps24320;rank=2 chr11a . CDS 299139 299955 . - 0 ID=Thaps24320;Parent=Thaps24320;rank=1 chr11a ensembl protein_coding_gene 289724 290311 . + . ID=Thaps8713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBT9];external_name=Thaps8713;logic_name=jgi_thaps3 chr11a ensembl transcript 289724 290311 . + . ID=Thaps8713;Parent=Thaps8713;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 289724 290311 . + 0 ID=Thaps8713;Parent=Thaps8713;rank=1 chr11a . exon 289724 290311 . + . ID=Thaps8713.1;Parent=Thaps8713;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 291726 292790 . + . ID=Thaps8715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBU1];external_name=Thaps8715;logic_name=jgi_thaps3 chr11a ensembl transcript 291726 292790 . + . ID=Thaps8715;Parent=Thaps8715;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 291726 292260 . + 0 ID=Thaps8715;Parent=Thaps8715;rank=1 chr11a . exon 291726 292260 . + . ID=Thaps8715.1;Parent=Thaps8715;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 292471 292790 . + 0 ID=Thaps8715;Parent=Thaps8715;rank=2 chr11a . exon 292471 292790 . + . ID=Thaps8715.2;Parent=Thaps8715;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . exon 298748 298876 . - . ID=Thaps24320.2;Parent=Thaps24320;constitutive=1;rank=2 chr11a . exon 299139 299955 . - . ID=Thaps24320.1;Parent=Thaps24320;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 300961 302016 . + . ID=Thaps8718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBU4];external_name=Thaps8718;logic_name=jgi_thaps3 chr11a ensembl transcript 300961 302016 . + . ID=Thaps8718;Parent=Thaps8718;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 300961 302016 . + 0 ID=Thaps8718;Parent=Thaps8718;rank=1 chr11a . exon 300961 302016 . + . ID=Thaps8718.1;Parent=Thaps8718;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 302083 303987 . - . ID=Thaps8719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBU5];external_name=Thaps8719;logic_name=jgi_thaps3 chr11a ensembl transcript 302083 303987 . - . ID=Thaps8719;Parent=Thaps8719;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 302083 303026 . - 0 ID=Thaps8719;Parent=Thaps8719;rank=2 chr11a . exon 302083 303026 . - . ID=Thaps8719.2;Parent=Thaps8719;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 303210 303987 . - 0 ID=Thaps8719;Parent=Thaps8719;rank=1 chr11a . exon 303210 303987 . - . ID=Thaps8719.1;Parent=Thaps8719;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 304188 306283 . + . ID=Thaps8720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBU6];external_name=Thaps8720;logic_name=jgi_thaps3 chr11a ensembl transcript 304188 306283 . + . ID=Thaps8720;Parent=Thaps8720;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 304188 305944 . + 0 ID=Thaps8720;Parent=Thaps8720;rank=1 chr11a . exon 304188 305944 . + . ID=Thaps8720.1;Parent=Thaps8720;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 306076 306133 . + 0 ID=Thaps8720;Parent=Thaps8720;rank=2 chr11a . exon 306076 306133 . + . ID=Thaps8720.2;Parent=Thaps8720;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 306227 306283 . + 0 ID=Thaps8720;Parent=Thaps8720;rank=3 chr11a . exon 306227 306283 . + . ID=Thaps8720.3;Parent=Thaps8720;constitutive=1;rank=3 chr11a ensembl protein_coding_gene 306980 308849 . + . ID=Thaps8721;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBU7];external_name=Thaps8721;logic_name=jgi_thaps3 chr11a ensembl transcript 306980 308849 . + . ID=Thaps8721;Parent=Thaps8721;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 306980 307118 . + 0 ID=Thaps8721;Parent=Thaps8721;rank=1 chr11a . exon 306980 307118 . + . ID=Thaps8721.1;Parent=Thaps8721;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 307154 307240 . + 0 ID=Thaps8721;Parent=Thaps8721;rank=2 chr11a . exon 307154 307240 . + . ID=Thaps8721.2;Parent=Thaps8721;constitutive=1;rank=2 chr11a . CDS 307366 307461 . + 0 ID=Thaps8721;Parent=Thaps8721;rank=3 chr11a . exon 307366 307461 . + . ID=Thaps8721.3;Parent=Thaps8721;constitutive=1;rank=3 chr11a . CDS 307665 307824 . + 0 ID=Thaps8721;Parent=Thaps8721;rank=4 chr11a . exon 307665 307824 . + . ID=Thaps8721.4;Parent=Thaps8721;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 307949 308849 . + 0 ID=Thaps8721;Parent=Thaps8721;rank=5 chr11a . exon 307949 308849 . + . ID=Thaps8721.5;Parent=Thaps8721;constitutive=1;ensembl_end_phase=1;rank=5 chr11a . repeat_region 317576 317605 . ? . description=trf chr11a ensembl protein_coding_gene 311773 312267 . - . ID=Thaps17600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBU9];external_name=Thaps17600;logic_name=jgi_thaps3 chr11a ensembl transcript 311773 312267 . - . ID=Thaps17600;Parent=Thaps17600;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 311773 312267 . - 0 ID=Thaps17600;Parent=Thaps17600;rank=1 chr11a . exon 311773 312267 . - . ID=Thaps17600.1;Parent=Thaps17600;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 316883 320859 . + . ID=Thaps24322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBV0];external_name=Thaps24322;logic_name=jgi_thaps3 chr11a ensembl transcript 316883 320859 . + . ID=Thaps24322;Parent=Thaps24322;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 316883 319021 . + 0 ID=Thaps24322;Parent=Thaps24322;rank=1 chr11a . exon 316883 319021 . + . ID=Thaps24322.1;Parent=Thaps24322;constitutive=1;rank=1 chr11a . CDS 319109 319195 . + 0 ID=Thaps24322;Parent=Thaps24322;rank=2 chr11a . CDS 319285 319417 . + 0 ID=Thaps24322;Parent=Thaps24322;rank=3 chr11a . CDS 319567 319943 . + 0 ID=Thaps24322;Parent=Thaps24322;rank=4 chr11a . CDS 319984 320859 . + 0 ID=Thaps24322;Parent=Thaps24322;rank=5 chr11a ensembl protein_coding_gene 308968 310807 . - . ID=Thaps41979;biotype=protein_coding;description=Probable glutathione reductase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBU8];external_name=Thaps41979;logic_name=jgi_thaps3 chr11a ensembl transcript 308968 310807 . - . ID=Thaps41979;Parent=Thaps41979;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 308968 309479 . - 0 ID=Thaps41979;Parent=Thaps41979;rank=3 chr11a . exon 308968 309479 . - . ID=Thaps41979.3;Parent=Thaps41979;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 309561 310420 . - 0 ID=Thaps41979;Parent=Thaps41979;rank=2 chr11a . exon 309561 310420 . - . ID=Thaps41979.2;Parent=Thaps41979;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 310503 310807 . - 0 ID=Thaps41979;Parent=Thaps41979;rank=1 chr11a . exon 310503 310807 . - . ID=Thaps41979.1;Parent=Thaps41979;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . repeat_region 326453 326460 . ? . description=dust chr11a . exon 319109 319195 . + . ID=Thaps24322.2;Parent=Thaps24322;constitutive=1;rank=2 chr11a . exon 319285 319417 . + . ID=Thaps24322.3;Parent=Thaps24322;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . exon 319567 319943 . + . ID=Thaps24322.4;Parent=Thaps24322;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . exon 319984 320859 . + . ID=Thaps24322.5;Parent=Thaps24322;constitutive=1;rank=5 chr11a ensembl protein_coding_gene 320970 322237 . - . ID=Thaps24323;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBV1];external_name=Thaps24323;logic_name=jgi_thaps3 chr11a ensembl transcript 320970 322237 . - . ID=Thaps24323;Parent=Thaps24323;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 320970 321977 . - 0 ID=Thaps24323;Parent=Thaps24323;rank=2 chr11a . exon 320970 321977 . - . ID=Thaps24323.2;Parent=Thaps24323;constitutive=1;rank=2 chr11a . CDS 322121 322237 . - 0 ID=Thaps24323;Parent=Thaps24323;rank=1 chr11a . exon 322121 322237 . - . ID=Thaps24323.1;Parent=Thaps24323;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 323297 324973 . - . ID=Thaps263781;biotype=protein_coding;description=Sulfate transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LBV2];external_name=Thaps263781;logic_name=jgi_thaps3 chr11a ensembl transcript 323297 324973 . - . ID=Thaps263781;Parent=Thaps263781;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 323297 324620 . - 0 ID=Thaps263781;Parent=Thaps263781;rank=2 chr11a . exon 323297 324620 . - . ID=Thaps263781.2;Parent=Thaps263781;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 324718 324973 . - 0 ID=Thaps263781;Parent=Thaps263781;rank=1 chr11a . exon 324718 324973 . - . ID=Thaps263781.1;Parent=Thaps263781;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 325549 327169 . + . ID=Thaps8726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBV3];external_name=Thaps8726;logic_name=jgi_thaps3 chr11a ensembl transcript 325549 327169 . + . ID=Thaps8726;Parent=Thaps8726;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 325549 325773 . + 0 ID=Thaps8726;Parent=Thaps8726;rank=1 chr11a . exon 325549 325773 . + . ID=Thaps8726.1;Parent=Thaps8726;constitutive=1;rank=1 chr11a . CDS 325877 326140 . + 0 ID=Thaps8726;Parent=Thaps8726;rank=2 chr11a . exon 325877 326140 . + . ID=Thaps8726.2;Parent=Thaps8726;constitutive=1;rank=2 chr11a . CDS 326492 327169 . + 0 ID=Thaps8726;Parent=Thaps8726;rank=3 chr11a . exon 326492 327169 . + . ID=Thaps8726.3;Parent=Thaps8726;constitutive=1;rank=3 chr11a . repeat_region 336633 336676 . ? . description=trf chr11a . repeat_region 336690 336753 . ? . description=trf chr11a ensembl protein_coding_gene 331672 337963 . - . ID=Thaps24325;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBV6];external_name=Thaps24325;logic_name=jgi_thaps3 chr11a ensembl transcript 331672 337963 . - . ID=Thaps24325;Parent=Thaps24325;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 331672 332882 . - 0 ID=Thaps24325;Parent=Thaps24325;rank=9 chr11a . exon 331672 332882 . - . ID=Thaps24325.9;Parent=Thaps24325;constitutive=1;ensembl_end_phase=2;rank=9 chr11a . CDS 332975 333919 . - 0 ID=Thaps24325;Parent=Thaps24325;rank=8 chr11a . exon 332975 333919 . - . ID=Thaps24325.8;Parent=Thaps24325;constitutive=1;rank=8 chr11a . CDS 334005 334691 . - 0 ID=Thaps24325;Parent=Thaps24325;rank=7 chr11a . exon 334005 334691 . - . ID=Thaps24325.7;Parent=Thaps24325;constitutive=1;rank=7 chr11a . CDS 334777 336043 . - 0 ID=Thaps24325;Parent=Thaps24325;rank=6 chr11a . exon 334777 336043 . - . ID=Thaps24325.6;Parent=Thaps24325;constitutive=1;ensembl_end_phase=1;rank=6 chr11a . CDS 336151 336222 . - 0 ID=Thaps24325;Parent=Thaps24325;rank=5 chr11a . exon 336151 336222 . - . ID=Thaps24325.5;Parent=Thaps24325;constitutive=1;rank=5 chr11a . CDS 336314 336391 . - 0 ID=Thaps24325;Parent=Thaps24325;rank=4 chr11a . exon 336314 336391 . - . ID=Thaps24325.4;Parent=Thaps24325;constitutive=1;rank=4 chr11a . CDS 336479 336764 . - 0 ID=Thaps24325;Parent=Thaps24325;rank=3 chr11a . exon 336479 336764 . - . ID=Thaps24325.3;Parent=Thaps24325;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 336861 337788 . - 0 ID=Thaps24325;Parent=Thaps24325;rank=2 chr11a . exon 336861 337788 . - . ID=Thaps24325.2;Parent=Thaps24325;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 337897 337963 . - 0 ID=Thaps24325;Parent=Thaps24325;rank=1 chr11a . exon 337897 337963 . - . ID=Thaps24325.1;Parent=Thaps24325;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 328787 329364 . + . ID=Thaps8727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBV4];external_name=Thaps8727;logic_name=jgi_thaps3 chr11a ensembl transcript 328787 329364 . + . ID=Thaps8727;Parent=Thaps8727;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 328787 329091 . + 0 ID=Thaps8727;Parent=Thaps8727;rank=1 chr11a . exon 328787 329091 . + . ID=Thaps8727.1;Parent=Thaps8727;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 329184 329364 . + 0 ID=Thaps8727;Parent=Thaps8727;rank=2 chr11a . exon 329184 329364 . + . ID=Thaps8727.2;Parent=Thaps8727;constitutive=1;ensembl_end_phase=1;rank=2 chr11a ensembl protein_coding_gene 329459 331452 . - . ID=Thaps8728;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBV5];external_name=Thaps8728;logic_name=jgi_thaps3 chr11a ensembl transcript 329459 331452 . - . ID=Thaps8728;Parent=Thaps8728;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 329459 329510 . - 0 ID=Thaps8728;Parent=Thaps8728;rank=4 chr11a . exon 329459 329510 . - . ID=Thaps8728.4;Parent=Thaps8728;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 329664 329679 . - 0 ID=Thaps8728;Parent=Thaps8728;rank=3 chr11a . exon 329664 329679 . - . ID=Thaps8728.3;Parent=Thaps8728;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 329748 330185 . - 0 ID=Thaps8728;Parent=Thaps8728;rank=2 chr11a . exon 329748 330185 . - . ID=Thaps8728.2;Parent=Thaps8728;constitutive=1;rank=2 chr11a . CDS 330315 331452 . - 0 ID=Thaps8728;Parent=Thaps8728;rank=1 chr11a . exon 330315 331452 . - . ID=Thaps8728.1;Parent=Thaps8728;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . repeat_region 338401 338411 . ? . description=dust chr11a . repeat_region 338683 338745 . ? . description=dust chr11a . repeat_region 343558 343590 . ? . description=dust chr11a ensembl protein_coding_gene 342241 343525 . - . ID=Thaps263782;biotype=protein_coding;description=Glycoside hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8LBV8];external_name=Thaps263782;logic_name=jgi_thaps3 chr11a ensembl transcript 342241 343525 . - . ID=Thaps263782;Parent=Thaps263782;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 342241 342872 . - 0 ID=Thaps263782;Parent=Thaps263782;rank=3 chr11a . exon 342241 342872 . - . ID=Thaps263782.3;Parent=Thaps263782;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 343049 343179 . - 0 ID=Thaps263782;Parent=Thaps263782;rank=2 chr11a . exon 343049 343179 . - . ID=Thaps263782.2;Parent=Thaps263782;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 343422 343525 . - 0 ID=Thaps263782;Parent=Thaps263782;rank=1 chr11a . exon 343422 343525 . - . ID=Thaps263782.1;Parent=Thaps263782;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 339049 340403 . + . ID=Thaps36568;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBV7];external_name=Thaps36568;logic_name=jgi_thaps3 chr11a ensembl transcript 339049 340403 . + . ID=Thaps36568;Parent=Thaps36568;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 339049 339203 . + 0 ID=Thaps36568;Parent=Thaps36568;rank=1 chr11a . exon 339049 339203 . + . ID=Thaps36568.1;Parent=Thaps36568;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 339657 339841 . + 0 ID=Thaps36568;Parent=Thaps36568;rank=2 chr11a . exon 339657 339841 . + . ID=Thaps36568.2;Parent=Thaps36568;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 339950 340152 . + 0 ID=Thaps36568;Parent=Thaps36568;rank=3 chr11a . exon 339950 340152 . + . ID=Thaps36568.3;Parent=Thaps36568;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 340233 340403 . + 0 ID=Thaps36568;Parent=Thaps36568;rank=4 chr11a . exon 340233 340403 . + . ID=Thaps36568.4;Parent=Thaps36568;constitutive=1;rank=4 chr11a ensembl protein_coding_gene 344926 349593 . + . ID=Thaps8732;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBV9];external_name=Thaps8732;logic_name=jgi_thaps3 chr11a ensembl transcript 344926 349593 . + . ID=Thaps8732;Parent=Thaps8732;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 344926 349593 . + 0 ID=Thaps8732;Parent=Thaps8732;rank=1 chr11a . exon 344926 349593 . + . ID=Thaps8732.1;Parent=Thaps8732;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 355486 358068 . + . ID=Thaps24327;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBW2];external_name=Thaps24327;logic_name=jgi_thaps3 chr11a ensembl transcript 355486 358068 . + . ID=Thaps24327;Parent=Thaps24327;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 355486 357655 . + 0 ID=Thaps24327;Parent=Thaps24327;rank=1 chr11a . exon 355486 357655 . + . ID=Thaps24327.1;Parent=Thaps24327;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 357728 358068 . + 0 ID=Thaps24327;Parent=Thaps24327;rank=2 chr11a . exon 357728 358068 . + . ID=Thaps24327.2;Parent=Thaps24327;constitutive=1;ensembl_end_phase=2;rank=2 chr11a ensembl protein_coding_gene 349746 352733 . - . ID=Thaps8733;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBW0];external_name=Thaps8733;logic_name=jgi_thaps3 chr11a ensembl transcript 349746 352733 . - . ID=Thaps8733;Parent=Thaps8733;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 349746 349859 . - 0 ID=Thaps8733;Parent=Thaps8733;rank=3 chr11a . exon 349746 349859 . - . ID=Thaps8733.3;Parent=Thaps8733;constitutive=1;rank=3 chr11a . CDS 349933 351406 . - 0 ID=Thaps8733;Parent=Thaps8733;rank=2 chr11a . exon 349933 351406 . - . ID=Thaps8733.2;Parent=Thaps8733;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 351487 352733 . - 0 ID=Thaps8733;Parent=Thaps8733;rank=1 chr11a . exon 351487 352733 . - . ID=Thaps8733.1;Parent=Thaps8733;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 353001 355012 . - . ID=Thaps8734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBW1];external_name=Thaps8734;logic_name=jgi_thaps3 chr11a ensembl transcript 353001 355012 . - . ID=Thaps8734;Parent=Thaps8734;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 353001 353445 . - 0 ID=Thaps8734;Parent=Thaps8734;rank=3 chr11a . exon 353001 353445 . - . ID=Thaps8734.3;Parent=Thaps8734;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 353535 353557 . - 0 ID=Thaps8734;Parent=Thaps8734;rank=2 chr11a . exon 353535 353557 . - . ID=Thaps8734.2;Parent=Thaps8734;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 353642 355012 . - 0 ID=Thaps8734;Parent=Thaps8734;rank=1 chr11a . exon 353642 355012 . - . ID=Thaps8734.1;Parent=Thaps8734;constitutive=1;rank=1 chr11a . repeat_region 359271 359279 . ? . description=dust chr11a . repeat_region 361055 361090 . ? . description=dust chr11a . repeat_region 366633 366692 . ? . description=dust chr11a ensembl protein_coding_gene 363940 366735 . - . ID=Thaps24328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBW6];external_name=Thaps24328;logic_name=jgi_thaps3 chr11a ensembl transcript 363940 366735 . - . ID=Thaps24328;Parent=Thaps24328;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 363940 364719 . - 0 ID=Thaps24328;Parent=Thaps24328;rank=4 chr11a . exon 363940 364719 . - . ID=Thaps24328.4;Parent=Thaps24328;constitutive=1;rank=4 chr11a . CDS 364816 365472 . - 0 ID=Thaps24328;Parent=Thaps24328;rank=3 chr11a . exon 364816 365472 . - . ID=Thaps24328.3;Parent=Thaps24328;constitutive=1;rank=3 chr11a . CDS 365514 365909 . - 0 ID=Thaps24328;Parent=Thaps24328;rank=2 chr11a . exon 365514 365909 . - . ID=Thaps24328.2;Parent=Thaps24328;constitutive=1;rank=2 chr11a . CDS 366010 366735 . - 0 ID=Thaps24328;Parent=Thaps24328;rank=1 chr11a . exon 366010 366735 . - . ID=Thaps24328.1;Parent=Thaps24328;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 361718 363760 . + . ID=Thaps263784;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBW5];external_name=Thaps263784;logic_name=jgi_thaps3 chr11a ensembl transcript 361718 363760 . + . ID=Thaps263784;Parent=Thaps263784;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 361718 361887 . + 0 ID=Thaps263784;Parent=Thaps263784;rank=1 chr11a . exon 361718 361887 . + . ID=Thaps263784.1;Parent=Thaps263784;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 361945 362164 . + 0 ID=Thaps263784;Parent=Thaps263784;rank=2 chr11a . exon 361945 362164 . + . ID=Thaps263784.2;Parent=Thaps263784;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 362183 362834 . + 0 ID=Thaps263784;Parent=Thaps263784;rank=3 chr11a . exon 362183 362834 . + . ID=Thaps263784.3;Parent=Thaps263784;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 362862 362986 . + 0 ID=Thaps263784;Parent=Thaps263784;rank=4 chr11a . exon 362862 362986 . + . ID=Thaps263784.4;Parent=Thaps263784;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 363020 363760 . + 0 ID=Thaps263784;Parent=Thaps263784;rank=5 chr11a . exon 363020 363760 . + . ID=Thaps263784.5;Parent=Thaps263784;constitutive=1;rank=5 chr11a ensembl protein_coding_gene 359389 360069 . + . ID=Thaps36709;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBW3];external_name=Thaps36709;logic_name=jgi_thaps3 chr11a ensembl transcript 359389 360069 . + . ID=Thaps36709;Parent=Thaps36709;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 359389 360069 . + 0 ID=Thaps36709;Parent=Thaps36709;rank=1 chr11a . exon 359389 360069 . + . ID=Thaps36709.1;Parent=Thaps36709;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 360257 361051 . - . ID=Thaps8737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBW4];external_name=Thaps8737;logic_name=jgi_thaps3 chr11a ensembl transcript 360257 361051 . - . ID=Thaps8737;Parent=Thaps8737;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 360257 361051 . - 0 ID=Thaps8737;Parent=Thaps8737;rank=1 chr11a . exon 360257 361051 . - . ID=Thaps8737.1;Parent=Thaps8737;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 367296 369323 . + . ID=Thaps8740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBW7];external_name=Thaps8740;logic_name=jgi_thaps3 chr11a ensembl transcript 367296 369323 . + . ID=Thaps8740;Parent=Thaps8740;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 367296 369323 . + 0 ID=Thaps8740;Parent=Thaps8740;rank=1 chr11a . exon 367296 369323 . + . ID=Thaps8740.1;Parent=Thaps8740;constitutive=1;rank=1 chr11a . repeat_region 370842 370920 . ? . description=trf chr11a . repeat_region 377853 377877 . ? . description=trf chr11a ensembl protein_coding_gene 373104 373370 . - . ID=Thaps19899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBW9];external_name=Thaps19899;logic_name=jgi_thaps3 chr11a ensembl transcript 373104 373370 . - . ID=Thaps19899;Parent=Thaps19899;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 373104 373370 . - 0 ID=Thaps19899;Parent=Thaps19899;rank=1 chr11a . exon 373104 373370 . - . ID=Thaps19899.1;Parent=Thaps19899;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 369977 373055 . - . ID=Thaps263785;biotype=protein_coding;description=Putative uncharacterized protein ZFP14 [Source:UniProtKB/TrEMBL%3BAcc:B8LBW8];external_name=ZFP14;logic_name=jgi_thaps3 chr11a ensembl transcript 369977 373055 . - . ID=Thaps263785;Parent=Thaps263785;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 369977 370648 . - 0 ID=Thaps263785;Parent=Thaps263785;rank=4 chr11a . exon 369977 370648 . - . ID=Thaps263785.4;Parent=Thaps263785;constitutive=1;rank=4 chr11a . CDS 371369 371646 . - 0 ID=Thaps263785;Parent=Thaps263785;rank=3 chr11a . exon 371369 371646 . - . ID=Thaps263785.3;Parent=Thaps263785;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 371698 372403 . - 0 ID=Thaps263785;Parent=Thaps263785;rank=2 chr11a . exon 371698 372403 . - . ID=Thaps263785.2;Parent=Thaps263785;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 372516 373055 . - 0 ID=Thaps263785;Parent=Thaps263785;rank=1 chr11a . exon 372516 373055 . - . ID=Thaps263785.1;Parent=Thaps263785;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 373846 374069 . - . ID=Thaps263786;biotype=protein_coding;description=Putative uncharacterized protein ZFP20 [Source:UniProtKB/TrEMBL%3BAcc:B8LBX0];external_name=ZFP20;logic_name=jgi_thaps3 chr11a ensembl transcript 373846 374069 . - . ID=Thaps263786;Parent=Thaps263786;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 373846 374069 . - 0 ID=Thaps263786;Parent=Thaps263786;rank=1 chr11a . exon 373846 374069 . - . ID=Thaps263786.1;Parent=Thaps263786;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 376614 377844 . - . ID=Thaps8742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBX1];external_name=Thaps8742;logic_name=jgi_thaps3 chr11a ensembl transcript 376614 377844 . - . ID=Thaps8742;Parent=Thaps8742;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 376614 377090 . - 0 ID=Thaps8742;Parent=Thaps8742;rank=4 chr11a . exon 376614 377090 . - . ID=Thaps8742.4;Parent=Thaps8742;constitutive=1;rank=4 chr11a . CDS 377210 377351 . - 0 ID=Thaps8742;Parent=Thaps8742;rank=3 chr11a . exon 377210 377351 . - . ID=Thaps8742.3;Parent=Thaps8742;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 377438 377703 . - 0 ID=Thaps8742;Parent=Thaps8742;rank=2 chr11a . exon 377438 377703 . - . ID=Thaps8742.2;Parent=Thaps8742;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 377746 377844 . - 0 ID=Thaps8742;Parent=Thaps8742;rank=1 chr11a . exon 377746 377844 . - . ID=Thaps8742.1;Parent=Thaps8742;constitutive=1;rank=1 chr11a . repeat_region 378727 378785 . ? . description=dust chr11a . biological_region 381162 381165 0.999 + . logic_name=eponine chr11a . repeat_region 382055 382109 . ? . description=dust chr11a . repeat_region 385017 385025 . ? . description=dust chr11a ensembl protein_coding_gene 386195 391664 . + . ID=Thaps24331;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBX3];external_name=Thaps24331;logic_name=jgi_thaps3 chr11a ensembl transcript 386195 391664 . + . ID=Thaps24331;Parent=Thaps24331;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 386195 387141 . + 0 ID=Thaps24331;Parent=Thaps24331;rank=1 chr11a . exon 386195 387141 . + . ID=Thaps24331.1;Parent=Thaps24331;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 387253 387484 . + 0 ID=Thaps24331;Parent=Thaps24331;rank=2 chr11a . exon 387253 387484 . + . ID=Thaps24331.2;Parent=Thaps24331;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 387526 389703 . + 0 ID=Thaps24331;Parent=Thaps24331;rank=3 chr11a . exon 387526 389703 . + . ID=Thaps24331.3;Parent=Thaps24331;constitutive=1;rank=3 chr11a . CDS 389777 391357 . + 0 ID=Thaps24331;Parent=Thaps24331;rank=4 chr11a . CDS 391446 391664 . + 0 ID=Thaps24331;Parent=Thaps24331;rank=5 chr11a ensembl protein_coding_gene 384473 385327 . + . ID=Thaps263787;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBX2];external_name=Thaps263787;logic_name=jgi_thaps3 chr11a ensembl transcript 384473 385327 . + . ID=Thaps263787;Parent=Thaps263787;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 384473 384541 . + 0 ID=Thaps263787;Parent=Thaps263787;rank=1 chr11a . exon 384473 384541 . + . ID=Thaps263787.1;Parent=Thaps263787;constitutive=1;rank=1 chr11a . CDS 384572 384889 . + 0 ID=Thaps263787;Parent=Thaps263787;rank=2 chr11a . exon 384572 384889 . + . ID=Thaps263787.2;Parent=Thaps263787;constitutive=1;rank=2 chr11a . CDS 384908 385327 . + 0 ID=Thaps263787;Parent=Thaps263787;rank=3 chr11a . exon 384908 385327 . + . ID=Thaps263787.3;Parent=Thaps263787;constitutive=1;rank=3 chr11a . repeat_region 393143 393178 . ? . description=trf chr11a ensembl protein_coding_gene 394323 394895 . + . ID=Thaps17484;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBX5];external_name=Thaps17484;logic_name=jgi_thaps3 chr11a ensembl transcript 394323 394895 . + . ID=Thaps17484;Parent=Thaps17484;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 394323 394895 . + 0 ID=Thaps17484;Parent=Thaps17484;rank=1 chr11a . exon 394323 394895 . + . ID=Thaps17484.1;Parent=Thaps17484;constitutive=1;rank=1 chr11a . exon 389777 391357 . + . ID=Thaps24331.4;Parent=Thaps24331;constitutive=1;rank=4 chr11a . exon 391446 391664 . + . ID=Thaps24331.5;Parent=Thaps24331;constitutive=1;rank=5 chr11a ensembl protein_coding_gene 395910 400354 . - . ID=Thaps24332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBX6];external_name=Thaps24332;logic_name=jgi_thaps3 chr11a ensembl transcript 395910 400354 . - . ID=Thaps24332;Parent=Thaps24332;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 395910 397036 . - 0 ID=Thaps24332;Parent=Thaps24332;rank=4 chr11a . exon 395910 397036 . - . ID=Thaps24332.4;Parent=Thaps24332;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 397121 397207 . - 0 ID=Thaps24332;Parent=Thaps24332;rank=3 chr11a . exon 397121 397207 . - . ID=Thaps24332.3;Parent=Thaps24332;constitutive=1;rank=3 chr11a . CDS 397304 397319 . - 0 ID=Thaps24332;Parent=Thaps24332;rank=2 chr11a . exon 397304 397319 . - . ID=Thaps24332.2;Parent=Thaps24332;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 397361 400354 . - 0 ID=Thaps24332;Parent=Thaps24332;rank=1 chr11a . exon 397361 400354 . - . ID=Thaps24332.1;Parent=Thaps24332;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 391831 392220 . - . ID=Thaps263788;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LBX4];external_name=Thaps263788;logic_name=jgi_thaps3 chr11a ensembl transcript 391831 392220 . - . ID=Thaps263788;Parent=Thaps263788;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 391831 392220 . - 0 ID=Thaps263788;Parent=Thaps263788;rank=1 chr11a . exon 391831 392220 . - . ID=Thaps263788.1;Parent=Thaps263788;constitutive=1;rank=1 chr11a . repeat_region 400373 400413 . ? . description=dust chr11a . repeat_region 401326 401335 . ? . description=dust chr11a ensembl protein_coding_gene 401764 407049 . + . ID=Thaps24333;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBX7];external_name=Thaps24333;logic_name=jgi_thaps3 chr11a ensembl transcript 401764 407049 . + . ID=Thaps24333;Parent=Thaps24333;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 401764 401933 . + 0 ID=Thaps24333;Parent=Thaps24333;rank=1 chr11a . exon 401764 401933 . + . ID=Thaps24333.1;Parent=Thaps24333;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 402077 403306 . + 0 ID=Thaps24333;Parent=Thaps24333;rank=2 chr11a . exon 402077 403306 . + . ID=Thaps24333.2;Parent=Thaps24333;constitutive=1;rank=2 chr11a . CDS 403408 403846 . + 0 ID=Thaps24333;Parent=Thaps24333;rank=3 chr11a . exon 403408 403846 . + . ID=Thaps24333.3;Parent=Thaps24333;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 403953 405249 . + 0 ID=Thaps24333;Parent=Thaps24333;rank=4 chr11a . exon 403953 405249 . + . ID=Thaps24333.4;Parent=Thaps24333;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 405333 405879 . + 0 ID=Thaps24333;Parent=Thaps24333;rank=5 chr11a . exon 405333 405879 . + . ID=Thaps24333.5;Parent=Thaps24333;constitutive=1;ensembl_end_phase=1;rank=5 chr11a . CDS 405977 406482 . + 0 ID=Thaps24333;Parent=Thaps24333;rank=6 chr11a . exon 405977 406482 . + . ID=Thaps24333.6;Parent=Thaps24333;constitutive=1;ensembl_end_phase=2;rank=6 chr11a . CDS 406574 407049 . + 0 ID=Thaps24333;Parent=Thaps24333;rank=7 chr11a . exon 406574 407049 . + . ID=Thaps24333.7;Parent=Thaps24333;constitutive=1;ensembl_end_phase=2;rank=7 chr11a ensembl protein_coding_gene 407294 412342 . - . ID=Thaps8748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBX8];external_name=Thaps8748;logic_name=jgi_thaps3 chr11a ensembl transcript 407294 412342 . - . ID=Thaps8748;Parent=Thaps8748;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 407294 412342 . - 0 ID=Thaps8748;Parent=Thaps8748;rank=1 chr11a . exon 407294 412342 . - . ID=Thaps8748.1;Parent=Thaps8748;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 412950 413489 . + . ID=Thaps8749;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBX9];external_name=Thaps8749;logic_name=jgi_thaps3 chr11a ensembl transcript 412950 413489 . + . ID=Thaps8749;Parent=Thaps8749;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 412950 413489 . + 0 ID=Thaps8749;Parent=Thaps8749;rank=1 chr11a . exon 412950 413489 . + . ID=Thaps8749.1;Parent=Thaps8749;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 416215 419148 . - . ID=Thaps8750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBY0];external_name=Thaps8750;logic_name=jgi_thaps3 chr11a ensembl transcript 416215 419148 . - . ID=Thaps8750;Parent=Thaps8750;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 416215 419148 . - 0 ID=Thaps8750;Parent=Thaps8750;rank=1 chr11a . exon 416215 419148 . - . ID=Thaps8750.1;Parent=Thaps8750;constitutive=1;rank=1 chr11a . repeat_region 423063 423094 . ? . description=trf chr11a . repeat_region 423063 423094 . ? . description=dust chr11a ensembl protein_coding_gene 420935 423628 . - . ID=Thaps24334;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBY1];external_name=Thaps24334;logic_name=jgi_thaps3 chr11a ensembl transcript 420935 423628 . - . ID=Thaps24334;Parent=Thaps24334;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 420935 422194 . - 0 ID=Thaps24334;Parent=Thaps24334;rank=3 chr11a . exon 420935 422194 . - . ID=Thaps24334.3;Parent=Thaps24334;constitutive=1;rank=3 chr11a . CDS 422252 423487 . - 0 ID=Thaps24334;Parent=Thaps24334;rank=2 chr11a . exon 422252 423487 . - . ID=Thaps24334.2;Parent=Thaps24334;constitutive=1;rank=2 chr11a . CDS 423563 423628 . - 0 ID=Thaps24334;Parent=Thaps24334;rank=1 chr11a . exon 423563 423628 . - . ID=Thaps24334.1;Parent=Thaps24334;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 423985 428035 . - . ID=Thaps681;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LBY2];external_name=Thaps681;logic_name=jgi_thaps3 chr11a ensembl transcript 423985 428035 . - . ID=Thaps681;Parent=Thaps681;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 423985 424289 . - 0 ID=Thaps681;Parent=Thaps681;rank=4 chr11a . exon 423985 424289 . - . ID=Thaps681.4;Parent=Thaps681;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 424365 424578 . - 0 ID=Thaps681;Parent=Thaps681;rank=3 chr11a . exon 424365 424578 . - . ID=Thaps681.3;Parent=Thaps681;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 427052 427397 . - 0 ID=Thaps681;Parent=Thaps681;rank=2 chr11a . exon 427052 427397 . - . ID=Thaps681.2;Parent=Thaps681;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 427485 428035 . - 0 ID=Thaps681;Parent=Thaps681;rank=1 chr11a . exon 427485 428035 . - . ID=Thaps681.1;Parent=Thaps681;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 428465 433468 . + . ID=Thaps24335;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBY3];external_name=Thaps24335;logic_name=jgi_thaps3 chr11a ensembl transcript 428465 433468 . + . ID=Thaps24335;Parent=Thaps24335;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 428465 428698 . + 0 ID=Thaps24335;Parent=Thaps24335;rank=1 chr11a . exon 428465 428698 . + . ID=Thaps24335.1;Parent=Thaps24335;constitutive=1;rank=1 chr11a . CDS 428873 431875 . + 0 ID=Thaps24335;Parent=Thaps24335;rank=2 chr11a . exon 428873 431875 . + . ID=Thaps24335.2;Parent=Thaps24335;constitutive=1;rank=2 chr11a . CDS 431968 433122 . + 0 ID=Thaps24335;Parent=Thaps24335;rank=3 chr11a . exon 431968 433122 . + . ID=Thaps24335.3;Parent=Thaps24335;constitutive=1;rank=3 chr11a . CDS 433211 433468 . + 0 ID=Thaps24335;Parent=Thaps24335;rank=4 chr11a . exon 433211 433468 . + . ID=Thaps24335.4;Parent=Thaps24335;constitutive=1;rank=4 chr11a ensembl protein_coding_gene 436212 436871 . - . ID=Thaps36669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBY4];external_name=TPT8;logic_name=jgi_thaps3 chr11a ensembl transcript 436212 436871 . - . ID=Thaps36669;Parent=Thaps36669;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 436212 436871 . - 0 ID=Thaps36669;Parent=Thaps36669;rank=1 chr11a . exon 436212 436871 . - . ID=Thaps36669.1;Parent=Thaps36669;constitutive=1;rank=1 chr11a . repeat_region 442998 443005 . ? . description=dust chr11a . repeat_region 443334 443342 . ? . description=dust chr11a . repeat_region 443571 443578 . ? . description=dust chr11a ensembl protein_coding_gene 441201 441635 . + . ID=Thaps19345;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBY5];external_name=Thaps19345;logic_name=jgi_thaps3 chr11a ensembl transcript 441201 441635 . + . ID=Thaps19345;Parent=Thaps19345;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 441201 441375 . + 0 ID=Thaps19345;Parent=Thaps19345;rank=1 chr11a . exon 441201 441375 . + . ID=Thaps19345.1;Parent=Thaps19345;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 441454 441635 . + 0 ID=Thaps19345;Parent=Thaps19345;rank=2 chr11a . exon 441454 441635 . + . ID=Thaps19345.2;Parent=Thaps19345;constitutive=1;ensembl_end_phase=2;rank=2 chr11a ensembl protein_coding_gene 446215 447154 . + . ID=Thaps24338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBY6];external_name=Thaps24338;logic_name=jgi_thaps3 chr11a ensembl transcript 446215 447154 . + . ID=Thaps24338;Parent=Thaps24338;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 446215 447027 . + 0 ID=Thaps24338;Parent=Thaps24338;rank=1 chr11a . exon 446215 447027 . + . ID=Thaps24338.1;Parent=Thaps24338;constitutive=1;rank=1 chr11a . CDS 447104 447154 . + 0 ID=Thaps24338;Parent=Thaps24338;rank=2 chr11a . exon 447104 447154 . + . ID=Thaps24338.2;Parent=Thaps24338;constitutive=1;rank=2 chr11a ensembl protein_coding_gene 447402 450146 . - . ID=Thaps24339;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBY7];external_name=Thaps24339;logic_name=jgi_thaps3 chr11a ensembl transcript 447402 450146 . - . ID=Thaps24339;Parent=Thaps24339;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 447402 450146 . - 0 ID=Thaps24339;Parent=Thaps24339;rank=1 chr11a . exon 447402 450146 . - . ID=Thaps24339.1;Parent=Thaps24339;constitutive=1;rank=1 chr11a . repeat_region 451069 452207 . ? . description=trf chr11a . repeat_region 451072 451299 . + . description=scaffold_10_75_1_198912_200279 chr11a . repeat_region 451388 451615 . + . description=scaffold_10_75_1_198912_200279 chr11a . repeat_region 451704 451931 . + . description=scaffold_10_75_1_198912_200279 chr11a . repeat_region 452020 452210 . + . description=scaffold_10_75_1_198912_200279 chr11a ensembl protein_coding_gene 453668 454673 . + . ID=Thaps15336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBY8];external_name=Thaps15336;logic_name=jgi_thaps3 chr11a ensembl transcript 453668 454673 . + . ID=Thaps15336;Parent=Thaps15336;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 453668 453865 . + 0 ID=Thaps15336;Parent=Thaps15336;rank=1 chr11a . exon 453668 453865 . + . ID=Thaps15336.1;Parent=Thaps15336;constitutive=1;rank=1 chr11a . CDS 453950 454035 . + 0 ID=Thaps15336;Parent=Thaps15336;rank=2 chr11a . exon 453950 454035 . + . ID=Thaps15336.2;Parent=Thaps15336;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 454131 454187 . + 0 ID=Thaps15336;Parent=Thaps15336;rank=3 chr11a . exon 454131 454187 . + . ID=Thaps15336.3;Parent=Thaps15336;constitutive=1;rank=3 chr11a . CDS 454289 454673 . + 0 ID=Thaps15336;Parent=Thaps15336;rank=4 chr11a . exon 454289 454673 . + . ID=Thaps15336.4;Parent=Thaps15336;constitutive=1;ensembl_end_phase=1;rank=4 chr11a ensembl protein_coding_gene 455352 459257 . - . ID=Thaps24340;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBY9];external_name=Thaps24340;logic_name=jgi_thaps3 chr11a ensembl transcript 455352 459257 . - . ID=Thaps24340;Parent=Thaps24340;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 455352 459257 . - 0 ID=Thaps24340;Parent=Thaps24340;rank=1 chr11a . exon 455352 459257 . - . ID=Thaps24340.1;Parent=Thaps24340;constitutive=1;rank=1 chr11a ensembl gene 451707 451930 . - . ID=Thaps263792;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr11a ensembl transcript 451707 451930 . - . ID=Thaps263792;Parent=Thaps263792;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr11a . exon 451707 451930 . - . ID=Thaps263792.1;Parent=Thaps263792;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . repeat_region 460903 460957 . + . description=Copia9LTR_TP chr11a ensembl protein_coding_gene 463527 463976 . + . ID=Thaps17687;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ1];external_name=Thaps17687;logic_name=jgi_thaps3 chr11a ensembl transcript 463527 463976 . + . ID=Thaps17687;Parent=Thaps17687;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 463527 463976 . + 0 ID=Thaps17687;Parent=Thaps17687;rank=1 chr11a . exon 463527 463976 . + . ID=Thaps17687.1;Parent=Thaps17687;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 459960 460706 . - . ID=Thaps24341;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ0];external_name=Thaps24341;logic_name=jgi_thaps3 chr11a ensembl transcript 459960 460706 . - . ID=Thaps24341;Parent=Thaps24341;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 459960 460706 . - 0 ID=Thaps24341;Parent=Thaps24341;rank=1 chr11a . exon 459960 460706 . - . ID=Thaps24341.1;Parent=Thaps24341;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 466886 470356 . + . ID=Thaps8762;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ2];external_name=Thaps8762;logic_name=jgi_thaps3 chr11a ensembl transcript 466886 470356 . + . ID=Thaps8762;Parent=Thaps8762;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 466886 468154 . + 0 ID=Thaps8762;Parent=Thaps8762;rank=1 chr11a . exon 466886 468154 . + . ID=Thaps8762.1;Parent=Thaps8762;constitutive=1;rank=1 chr11a . CDS 468248 469412 . + 0 ID=Thaps8762;Parent=Thaps8762;rank=2 chr11a . CDS 469485 469998 . + 0 ID=Thaps8762;Parent=Thaps8762;rank=3 chr11a . CDS 470035 470356 . + 0 ID=Thaps8762;Parent=Thaps8762;rank=4 chr11a . repeat_region 470760 470781 . ? . description=trf chr11a . repeat_region 470760 470781 . ? . description=dust chr11a . repeat_region 472647 472654 . ? . description=dust chr11a . repeat_region 477624 477671 . ? . description=dust chr11a ensembl protein_coding_gene 470860 471256 . - . ID=Thaps19701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ3];external_name=Thaps19701;logic_name=jgi_thaps3 chr11a ensembl transcript 470860 471256 . - . ID=Thaps19701;Parent=Thaps19701;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 470860 471067 . - 0 ID=Thaps19701;Parent=Thaps19701;rank=2 chr11a . exon 470860 471067 . - . ID=Thaps19701.2;Parent=Thaps19701;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 471171 471256 . - 0 ID=Thaps19701;Parent=Thaps19701;rank=1 chr11a . exon 471171 471256 . - . ID=Thaps19701.1;Parent=Thaps19701;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 472719 473540 . - . ID=Thaps24343;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ5];external_name=Thaps24343;logic_name=jgi_thaps3 chr11a ensembl transcript 472719 473540 . - . ID=Thaps24343;Parent=Thaps24343;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 472719 473540 . - 0 ID=Thaps24343;Parent=Thaps24343;rank=1 chr11a . exon 472719 473540 . - . ID=Thaps24343.1;Parent=Thaps24343;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 475999 479367 . - . ID=Thaps24345;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ7];external_name=Thaps24345;logic_name=jgi_thaps3 chr11a ensembl transcript 475999 479367 . - . ID=Thaps24345;Parent=Thaps24345;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 475999 477575 . - 0 ID=Thaps24345;Parent=Thaps24345;rank=2 chr11a . exon 475999 477575 . - . ID=Thaps24345.2;Parent=Thaps24345;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 477876 479367 . - 0 ID=Thaps24345;Parent=Thaps24345;rank=1 chr11a ensembl protein_coding_gene 474878 475101 . - . ID=Thaps263793;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ6];external_name=Thaps263793;logic_name=jgi_thaps3 chr11a ensembl transcript 474878 475101 . - . ID=Thaps263793;Parent=Thaps263793;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 474878 475101 . - 0 ID=Thaps263793;Parent=Thaps263793;rank=1 chr11a . exon 474878 475101 . - . ID=Thaps263793.1;Parent=Thaps263793;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 471687 472394 . + . ID=Thaps36664;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ4];external_name=Thaps36664;logic_name=jgi_thaps3 chr11a ensembl transcript 471687 472394 . + . ID=Thaps36664;Parent=Thaps36664;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 471687 472025 . + 0 ID=Thaps36664;Parent=Thaps36664;rank=1 chr11a . exon 471687 472025 . + . ID=Thaps36664.1;Parent=Thaps36664;constitutive=1;rank=1 chr11a . CDS 472152 472394 . + 0 ID=Thaps36664;Parent=Thaps36664;rank=2 chr11a . exon 472152 472394 . + . ID=Thaps36664.2;Parent=Thaps36664;constitutive=1;rank=2 chr11a . exon 468248 469412 . + . ID=Thaps8762.2;Parent=Thaps8762;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . exon 469485 469998 . + . ID=Thaps8762.3;Parent=Thaps8762;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . exon 470035 470356 . + . ID=Thaps8762.4;Parent=Thaps8762;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . exon 477876 479367 . - . ID=Thaps24345.1;Parent=Thaps24345;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 480579 481520 . + . ID=Thaps24346;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ8];external_name=Thaps24346;logic_name=jgi_thaps3 chr11a ensembl transcript 480579 481520 . + . ID=Thaps24346;Parent=Thaps24346;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 480579 481520 . + 0 ID=Thaps24346;Parent=Thaps24346;rank=1 chr11a . exon 480579 481520 . + . ID=Thaps24346.1;Parent=Thaps24346;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 483119 485033 . + . ID=Thaps8768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBZ9];external_name=Thaps8768;logic_name=jgi_thaps3 chr11a ensembl transcript 483119 485033 . + . ID=Thaps8768;Parent=Thaps8768;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 483119 484448 . + 0 ID=Thaps8768;Parent=Thaps8768;rank=1 chr11a . exon 483119 484448 . + . ID=Thaps8768.1;Parent=Thaps8768;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 484527 484633 . + 0 ID=Thaps8768;Parent=Thaps8768;rank=2 chr11a . exon 484527 484633 . + . ID=Thaps8768.2;Parent=Thaps8768;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 484716 485033 . + 0 ID=Thaps8768;Parent=Thaps8768;rank=3 chr11a . exon 484716 485033 . + . ID=Thaps8768.3;Parent=Thaps8768;constitutive=1;rank=3 chr11a . repeat_region 490767 490815 . ? . description=trf chr11a . repeat_region 490782 490833 . ? . description=trf chr11a ensembl protein_coding_gene 494211 498402 . - . ID=Thaps24347;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC02];external_name=Thaps24347;logic_name=jgi_thaps3 chr11a ensembl transcript 494211 498402 . - . ID=Thaps24347;Parent=Thaps24347;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 494211 494879 . - 0 ID=Thaps24347;Parent=Thaps24347;rank=4 chr11a . exon 494211 494879 . - . ID=Thaps24347.4;Parent=Thaps24347;constitutive=1;rank=4 chr11a . CDS 494962 495332 . - 0 ID=Thaps24347;Parent=Thaps24347;rank=3 chr11a . exon 494962 495332 . - . ID=Thaps24347.3;Parent=Thaps24347;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 495419 496952 . - 0 ID=Thaps24347;Parent=Thaps24347;rank=2 chr11a . exon 495419 496952 . - . ID=Thaps24347.2;Parent=Thaps24347;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 497002 498402 . - 0 ID=Thaps24347;Parent=Thaps24347;rank=1 chr11a . exon 497002 498402 . - . ID=Thaps24347.1;Parent=Thaps24347;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 491411 492640 . - . ID=Thaps36742;biotype=protein_coding;description=3-ketoacyl-coa thiolase [Source:UniProtKB/TrEMBL%3BAcc:B8LC01];external_name=KCT2;logic_name=jgi_thaps3 chr11a ensembl transcript 491411 492640 . - . ID=Thaps36742;Parent=Thaps36742;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 491411 492640 . - 0 ID=Thaps36742;Parent=Thaps36742;rank=1 chr11a . exon 491411 492640 . - . ID=Thaps36742.1;Parent=Thaps36742;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 488695 490983 . - . ID=Thaps8769;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC00];external_name=Thaps8769;logic_name=jgi_thaps3 chr11a ensembl transcript 488695 490983 . - . ID=Thaps8769;Parent=Thaps8769;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 488695 490983 . - 0 ID=Thaps8769;Parent=Thaps8769;rank=1 chr11a . exon 488695 490983 . - . ID=Thaps8769.1;Parent=Thaps8769;constitutive=1;rank=1 chr11a . repeat_region 501892 501900 . ? . description=dust chr11a ensembl protein_coding_gene 499623 500843 . - . ID=Thaps24348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC04];external_name=Thaps24348;logic_name=jgi_thaps3 chr11a ensembl transcript 499623 500843 . - . ID=Thaps24348;Parent=Thaps24348;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 499623 500843 . - 0 ID=Thaps24348;Parent=Thaps24348;rank=1 chr11a . exon 499623 500843 . - . ID=Thaps24348.1;Parent=Thaps24348;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 498749 499375 . + . ID=Thaps8773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC03];external_name=Thaps8773;logic_name=jgi_thaps3 chr11a ensembl transcript 498749 499375 . + . ID=Thaps8773;Parent=Thaps8773;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 498749 499375 . + 0 ID=Thaps8773;Parent=Thaps8773;rank=1 chr11a . exon 498749 499375 . + . ID=Thaps8773.1;Parent=Thaps8773;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 501984 504211 . + . ID=Thaps8775;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC05];external_name=Thaps8775;logic_name=jgi_thaps3 chr11a ensembl transcript 501984 504211 . + . ID=Thaps8775;Parent=Thaps8775;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 501984 503649 . + 0 ID=Thaps8775;Parent=Thaps8775;rank=1 chr11a . exon 501984 503649 . + . ID=Thaps8775.1;Parent=Thaps8775;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 503730 504211 . + 0 ID=Thaps8775;Parent=Thaps8775;rank=2 chr11a . exon 503730 504211 . + . ID=Thaps8775.2;Parent=Thaps8775;constitutive=1;ensembl_end_phase=2;rank=2 chr11a ensembl protein_coding_gene 504288 505202 . - . ID=Thaps8776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC06];external_name=Thaps8776;logic_name=jgi_thaps3 chr11a ensembl transcript 504288 505202 . - . ID=Thaps8776;Parent=Thaps8776;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 504288 505202 . - 0 ID=Thaps8776;Parent=Thaps8776;rank=1 chr11a . exon 504288 505202 . - . ID=Thaps8776.1;Parent=Thaps8776;constitutive=1;rank=1 chr11a . repeat_region 516030 516066 . ? . description=trf chr11a ensembl protein_coding_gene 512923 514701 . + . ID=Thaps263798;biotype=protein_coding;description=Incenp-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC10];external_name=Thaps263798;logic_name=jgi_thaps3 chr11a ensembl transcript 512923 514701 . + . ID=Thaps263798;Parent=Thaps263798;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 512923 513270 . + 0 ID=Thaps263798;Parent=Thaps263798;rank=1 chr11a . exon 512923 513270 . + . ID=Thaps263798.1;Parent=Thaps263798;constitutive=1;rank=1 chr11a . CDS 513751 513882 . + 0 ID=Thaps263798;Parent=Thaps263798;rank=2 chr11a . exon 513751 513882 . + . ID=Thaps263798.2;Parent=Thaps263798;constitutive=1;rank=2 chr11a . CDS 514326 514430 . + 0 ID=Thaps263798;Parent=Thaps263798;rank=3 chr11a . exon 514326 514430 . + . ID=Thaps263798.3;Parent=Thaps263798;constitutive=1;rank=3 chr11a . CDS 514522 514701 . + 0 ID=Thaps263798;Parent=Thaps263798;rank=4 chr11a . exon 514522 514701 . + . ID=Thaps263798.4;Parent=Thaps263798;constitutive=1;rank=4 chr11a ensembl protein_coding_gene 516821 518695 . - . ID=Thaps263799;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC13];external_name=Thaps263799;logic_name=jgi_thaps3 chr11a ensembl transcript 516821 518695 . - . ID=Thaps263799;Parent=Thaps263799;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 516821 517552 . - 0 ID=Thaps263799;Parent=Thaps263799;rank=3 chr11a . exon 516821 517552 . - . ID=Thaps263799.3;Parent=Thaps263799;constitutive=1;rank=3 chr11a . CDS 517580 518015 . - 0 ID=Thaps263799;Parent=Thaps263799;rank=2 chr11a . CDS 518098 518695 . - 0 ID=Thaps263799;Parent=Thaps263799;rank=1 chr11a ensembl protein_coding_gene 507661 509679 . - . ID=Thaps8777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC07];external_name=Thaps8777;logic_name=jgi_thaps3 chr11a ensembl transcript 507661 509679 . - . ID=Thaps8777;Parent=Thaps8777;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 507661 507747 . - 0 ID=Thaps8777;Parent=Thaps8777;rank=6 chr11a . exon 507661 507747 . - . ID=Thaps8777.6;Parent=Thaps8777;constitutive=1;rank=6 chr11a . CDS 507857 508015 . - 0 ID=Thaps8777;Parent=Thaps8777;rank=5 chr11a . exon 507857 508015 . - . ID=Thaps8777.5;Parent=Thaps8777;constitutive=1;rank=5 chr11a . CDS 508095 508355 . - 0 ID=Thaps8777;Parent=Thaps8777;rank=4 chr11a . exon 508095 508355 . - . ID=Thaps8777.4;Parent=Thaps8777;constitutive=1;rank=4 chr11a . CDS 508446 508568 . - 0 ID=Thaps8777;Parent=Thaps8777;rank=3 chr11a . exon 508446 508568 . - . ID=Thaps8777.3;Parent=Thaps8777;constitutive=1;rank=3 chr11a . CDS 508665 509054 . - 0 ID=Thaps8777;Parent=Thaps8777;rank=2 chr11a . exon 508665 509054 . - . ID=Thaps8777.2;Parent=Thaps8777;constitutive=1;rank=2 chr11a . CDS 509131 509679 . - 0 ID=Thaps8777;Parent=Thaps8777;rank=1 chr11a . exon 509131 509679 . - . ID=Thaps8777.1;Parent=Thaps8777;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 510390 511400 . + . ID=Thaps8778;biotype=protein_coding;description=Pyruvate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8LC08];external_name=PDHB1;logic_name=jgi_thaps3 chr11a ensembl transcript 510390 511400 . + . ID=Thaps8778;Parent=Thaps8778;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 510390 511400 . + 0 ID=Thaps8778;Parent=Thaps8778;rank=1 chr11a . exon 510390 511400 . + . ID=Thaps8778.1;Parent=Thaps8778;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 511538 512305 . - . ID=Thaps8779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC09];external_name=Thaps8779;logic_name=jgi_thaps3 chr11a ensembl transcript 511538 512305 . - . ID=Thaps8779;Parent=Thaps8779;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 511538 512305 . - 0 ID=Thaps8779;Parent=Thaps8779;rank=1 chr11a . exon 511538 512305 . - . ID=Thaps8779.1;Parent=Thaps8779;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 515046 515552 . - . ID=Thaps8781;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC11];external_name=Thaps8781;logic_name=jgi_thaps3 chr11a ensembl transcript 515046 515552 . - . ID=Thaps8781;Parent=Thaps8781;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 515046 515552 . - 0 ID=Thaps8781;Parent=Thaps8781;rank=1 chr11a . exon 515046 515552 . - . ID=Thaps8781.1;Parent=Thaps8781;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 516280 516690 . + . ID=Thaps8782;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC12];external_name=Thaps8782;logic_name=jgi_thaps3 chr11a ensembl transcript 516280 516690 . + . ID=Thaps8782;Parent=Thaps8782;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 516280 516690 . + 0 ID=Thaps8782;Parent=Thaps8782;rank=1 chr11a . exon 516280 516690 . + . ID=Thaps8782.1;Parent=Thaps8782;constitutive=1;rank=1 chr11a . repeat_region 518760 518806 . ? . description=dust chr11a ensembl protein_coding_gene 525362 527197 . - . ID=Thaps24350;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC16];external_name=Thaps24350;logic_name=jgi_thaps3 chr11a ensembl transcript 525362 527197 . - . ID=Thaps24350;Parent=Thaps24350;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 525362 525369 . - 0 ID=Thaps24350;Parent=Thaps24350;rank=2 chr11a . exon 525362 525369 . - . ID=Thaps24350.2;Parent=Thaps24350;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 525610 527197 . - 0 ID=Thaps24350;Parent=Thaps24350;rank=1 chr11a . exon 525610 527197 . - . ID=Thaps24350.1;Parent=Thaps24350;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . exon 517580 518015 . - . ID=Thaps263799.2;Parent=Thaps263799;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . exon 518098 518695 . - . ID=Thaps263799.1;Parent=Thaps263799;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 519107 520118 . + . ID=Thaps263800;biotype=protein_coding;description=Heavy metal transporter [Source:UniProtKB/TrEMBL%3BAcc:B8LC14];external_name=Thaps263800;logic_name=jgi_thaps3 chr11a ensembl transcript 519107 520118 . + . ID=Thaps263800;Parent=Thaps263800;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 519107 519397 . + 0 ID=Thaps263800;Parent=Thaps263800;rank=1 chr11a . exon 519107 519397 . + . ID=Thaps263800.1;Parent=Thaps263800;constitutive=1;rank=1 chr11a . CDS 519531 519561 . + 0 ID=Thaps263800;Parent=Thaps263800;rank=2 chr11a . exon 519531 519561 . + . ID=Thaps263800.2;Parent=Thaps263800;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 519624 520118 . + 0 ID=Thaps263800;Parent=Thaps263800;rank=3 chr11a . exon 519624 520118 . + . ID=Thaps263800.3;Parent=Thaps263800;constitutive=1;rank=3 chr11a ensembl protein_coding_gene 520224 521720 . - . ID=Thaps8784;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC15];external_name=Thaps8784;logic_name=jgi_thaps3 chr11a ensembl transcript 520224 521720 . - . ID=Thaps8784;Parent=Thaps8784;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 520224 521720 . - 0 ID=Thaps8784;Parent=Thaps8784;rank=1 chr11a . exon 520224 521720 . - . ID=Thaps8784.1;Parent=Thaps8784;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 531455 538216 . - . ID=Thaps24352;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC19];external_name=Thaps24352;logic_name=jgi_thaps3 chr11a ensembl transcript 531455 538216 . - . ID=Thaps24352;Parent=Thaps24352;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 531455 531499 . - 0 ID=Thaps24352;Parent=Thaps24352;rank=4 chr11a . exon 531455 531499 . - . ID=Thaps24352.4;Parent=Thaps24352;constitutive=1;rank=4 chr11a . CDS 531613 534592 . - 0 ID=Thaps24352;Parent=Thaps24352;rank=3 chr11a . exon 531613 534592 . - . ID=Thaps24352.3;Parent=Thaps24352;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 535020 536393 . - 0 ID=Thaps24352;Parent=Thaps24352;rank=2 chr11a . exon 535020 536393 . - . ID=Thaps24352.2;Parent=Thaps24352;constitutive=1;rank=2 chr11a . CDS 536487 538216 . - 0 ID=Thaps24352;Parent=Thaps24352;rank=1 chr11a . exon 536487 538216 . - . ID=Thaps24352.1;Parent=Thaps24352;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 528245 529464 . + . ID=Thaps263801;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC17];external_name=Thaps263801;logic_name=jgi_thaps3 chr11a ensembl transcript 528245 529464 . + . ID=Thaps263801;Parent=Thaps263801;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 528245 528581 . + 0 ID=Thaps263801;Parent=Thaps263801;rank=1 chr11a . exon 528245 528581 . + . ID=Thaps263801.1;Parent=Thaps263801;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 528678 529012 . + 0 ID=Thaps263801;Parent=Thaps263801;rank=2 chr11a . exon 528678 529012 . + . ID=Thaps263801.2;Parent=Thaps263801;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 529113 529464 . + 0 ID=Thaps263801;Parent=Thaps263801;rank=3 chr11a . exon 529113 529464 . + . ID=Thaps263801.3;Parent=Thaps263801;constitutive=1;ensembl_end_phase=1;rank=3 chr11a ensembl protein_coding_gene 530629 531120 . + . ID=Thaps8787;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC18];external_name=Thaps8787;logic_name=jgi_thaps3 chr11a ensembl transcript 530629 531120 . + . ID=Thaps8787;Parent=Thaps8787;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 530629 531120 . + 0 ID=Thaps8787;Parent=Thaps8787;rank=1 chr11a . exon 530629 531120 . + . ID=Thaps8787.1;Parent=Thaps8787;constitutive=1;rank=1 chr11a . repeat_region 538302 538368 . ? . description=dust chr11a . repeat_region 538306 538329 . ? . description=trf chr11a . repeat_region 538314 538364 . ? . description=trf chr11a . repeat_region 538314 538364 . ? . description=trf chr11a . repeat_region 538320 538357 . ? . description=trf chr11a . repeat_region 539878 539899 . ? . description=trf chr11a . repeat_region 539878 539899 . ? . description=dust chr11a . repeat_region 543617 543689 . ? . description=trf chr11a ensembl protein_coding_gene 539767 540120 . - . ID=Thaps24353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC21];external_name=Thaps24353;logic_name=jgi_thaps3 chr11a ensembl transcript 539767 540120 . - . ID=Thaps24353;Parent=Thaps24353;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 539767 540120 . - 0 ID=Thaps24353;Parent=Thaps24353;rank=1 chr11a . exon 539767 540120 . - . ID=Thaps24353.1;Parent=Thaps24353;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 542334 544292 . - . ID=Thaps24355;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC23];external_name=Thaps24355;logic_name=jgi_thaps3 chr11a ensembl transcript 542334 544292 . - . ID=Thaps24355;Parent=Thaps24355;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 542334 543036 . - 0 ID=Thaps24355;Parent=Thaps24355;rank=2 chr11a . exon 542334 543036 . - . ID=Thaps24355.2;Parent=Thaps24355;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 543118 544292 . - 0 ID=Thaps24355;Parent=Thaps24355;rank=1 chr11a . exon 543118 544292 . - . ID=Thaps24355.1;Parent=Thaps24355;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 547406 547651 . - . ID=Thaps36592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC25];external_name=Thaps36592;logic_name=jgi_thaps3 chr11a ensembl transcript 547406 547651 . - . ID=Thaps36592;Parent=Thaps36592;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 547406 547651 . - 0 ID=Thaps36592;Parent=Thaps36592;rank=1 chr11a . exon 547406 547651 . - . ID=Thaps36592.1;Parent=Thaps36592;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 540948 541932 . + . ID=Thaps36735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC22];external_name=Thaps36735;logic_name=jgi_thaps3 chr11a ensembl transcript 540948 541932 . + . ID=Thaps36735;Parent=Thaps36735;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 540948 540994 . + 0 ID=Thaps36735;Parent=Thaps36735;rank=1 chr11a . exon 540948 540994 . + . ID=Thaps36735.1;Parent=Thaps36735;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 541182 541218 . + 0 ID=Thaps36735;Parent=Thaps36735;rank=2 chr11a . exon 541182 541218 . + . ID=Thaps36735.2;Parent=Thaps36735;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 541396 541587 . + 0 ID=Thaps36735;Parent=Thaps36735;rank=3 chr11a . exon 541396 541587 . + . ID=Thaps36735.3;Parent=Thaps36735;constitutive=1;rank=3 chr11a . CDS 541684 541932 . + 0 ID=Thaps36735;Parent=Thaps36735;rank=4 chr11a . exon 541684 541932 . + . ID=Thaps36735.4;Parent=Thaps36735;constitutive=1;rank=4 chr11a ensembl protein_coding_gene 538658 539482 . + . ID=Thaps8789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC20];external_name=Thaps8789;logic_name=jgi_thaps3 chr11a ensembl transcript 538658 539482 . + . ID=Thaps8789;Parent=Thaps8789;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 538658 539482 . + 0 ID=Thaps8789;Parent=Thaps8789;rank=1 chr11a . exon 538658 539482 . + . ID=Thaps8789.1;Parent=Thaps8789;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 544663 545786 . + . ID=Thaps8793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC24];external_name=Thaps8793;logic_name=jgi_thaps3 chr11a ensembl transcript 544663 545786 . + . ID=Thaps8793;Parent=Thaps8793;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 544663 544938 . + 0 ID=Thaps8793;Parent=Thaps8793;rank=1 chr11a . exon 544663 544938 . + . ID=Thaps8793.1;Parent=Thaps8793;constitutive=1;rank=1 chr11a . CDS 545046 545786 . + 0 ID=Thaps8793;Parent=Thaps8793;rank=2 chr11a . exon 545046 545786 . + . ID=Thaps8793.2;Parent=Thaps8793;constitutive=1;rank=2 chr11a ensembl protein_coding_gene 555587 559075 . + . ID=Thaps24357;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC27];external_name=Thaps24357;logic_name=jgi_thaps3 chr11a ensembl transcript 555587 559075 . + . ID=Thaps24357;Parent=Thaps24357;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 555587 556670 . + 0 ID=Thaps24357;Parent=Thaps24357;rank=1 chr11a . exon 555587 556670 . + . ID=Thaps24357.1;Parent=Thaps24357;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 556742 556896 . + 0 ID=Thaps24357;Parent=Thaps24357;rank=2 chr11a . exon 556742 556896 . + . ID=Thaps24357.2;Parent=Thaps24357;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 556965 557219 . + 0 ID=Thaps24357;Parent=Thaps24357;rank=3 chr11a . exon 556965 557219 . + . ID=Thaps24357.3;Parent=Thaps24357;constitutive=1;rank=3 chr11a . CDS 557292 557433 . + 0 ID=Thaps24357;Parent=Thaps24357;rank=4 chr11a . exon 557292 557433 . + . ID=Thaps24357.4;Parent=Thaps24357;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 557511 559075 . + 0 ID=Thaps24357;Parent=Thaps24357;rank=5 chr11a ensembl protein_coding_gene 549453 555076 . - . ID=Thaps8795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC26];external_name=Thaps8795;logic_name=jgi_thaps3 chr11a ensembl transcript 549453 555076 . - . ID=Thaps8795;Parent=Thaps8795;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 549453 550236 . - 0 ID=Thaps8795;Parent=Thaps8795;rank=7 chr11a . exon 549453 550236 . - . ID=Thaps8795.7;Parent=Thaps8795;constitutive=1;ensembl_end_phase=1;rank=7 chr11a . CDS 550484 552267 . - 0 ID=Thaps8795;Parent=Thaps8795;rank=6 chr11a . exon 550484 552267 . - . ID=Thaps8795.6;Parent=Thaps8795;constitutive=1;ensembl_end_phase=2;rank=6 chr11a . CDS 552344 552396 . - 0 ID=Thaps8795;Parent=Thaps8795;rank=5 chr11a . exon 552344 552396 . - . ID=Thaps8795.5;Parent=Thaps8795;constitutive=1;ensembl_end_phase=2;rank=5 chr11a . CDS 552487 552698 . - 0 ID=Thaps8795;Parent=Thaps8795;rank=4 chr11a . exon 552487 552698 . - . ID=Thaps8795.4;Parent=Thaps8795;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 552752 552989 . - 0 ID=Thaps8795;Parent=Thaps8795;rank=3 chr11a . exon 552752 552989 . - . ID=Thaps8795.3;Parent=Thaps8795;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 553180 553651 . - 0 ID=Thaps8795;Parent=Thaps8795;rank=2 chr11a . exon 553180 553651 . - . ID=Thaps8795.2;Parent=Thaps8795;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 553739 555076 . - 0 ID=Thaps8795;Parent=Thaps8795;rank=1 chr11a . exon 553739 555076 . - . ID=Thaps8795.1;Parent=Thaps8795;constitutive=1;rank=1 chr11a . repeat_region 563045 563052 . ? . description=dust chr11a . exon 557511 559075 . + . ID=Thaps24357.5;Parent=Thaps24357;constitutive=1;ensembl_end_phase=2;rank=5 chr11a ensembl protein_coding_gene 566616 569660 . - . ID=Thaps24358;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC31];external_name=Thaps24358;logic_name=jgi_thaps3 chr11a ensembl transcript 566616 569660 . - . ID=Thaps24358;Parent=Thaps24358;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 566616 569660 . - 0 ID=Thaps24358;Parent=Thaps24358;rank=1 chr11a . exon 566616 569660 . - . ID=Thaps24358.1;Parent=Thaps24358;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 559614 561872 . + . ID=Thaps8797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC28];external_name=Thaps8797;logic_name=jgi_thaps3 chr11a ensembl transcript 559614 561872 . + . ID=Thaps8797;Parent=Thaps8797;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 559614 561872 . + 0 ID=Thaps8797;Parent=Thaps8797;rank=1 chr11a . exon 559614 561872 . + . ID=Thaps8797.1;Parent=Thaps8797;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 562185 562685 . + . ID=Thaps8798;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC29];external_name=Thaps8798;logic_name=jgi_thaps3 chr11a ensembl transcript 562185 562685 . + . ID=Thaps8798;Parent=Thaps8798;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 562185 562685 . + 0 ID=Thaps8798;Parent=Thaps8798;rank=1 chr11a . exon 562185 562685 . + . ID=Thaps8798.1;Parent=Thaps8798;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 562745 563710 . - . ID=Thaps8799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC30];external_name=Thaps8799;logic_name=jgi_thaps3 chr11a ensembl transcript 562745 563710 . - . ID=Thaps8799;Parent=Thaps8799;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 562745 563710 . - 0 ID=Thaps8799;Parent=Thaps8799;rank=1 chr11a . exon 562745 563710 . - . ID=Thaps8799.1;Parent=Thaps8799;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 573873 574258 . - . ID=Thaps19360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC33];external_name=Thaps19360;logic_name=jgi_thaps3 chr11a ensembl transcript 573873 574258 . - . ID=Thaps19360;Parent=Thaps19360;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 573873 574023 . - 0 ID=Thaps19360;Parent=Thaps19360;rank=2 chr11a . exon 573873 574023 . - . ID=Thaps19360.2;Parent=Thaps19360;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 574107 574258 . - 0 ID=Thaps19360;Parent=Thaps19360;rank=1 chr11a . exon 574107 574258 . - . ID=Thaps19360.1;Parent=Thaps19360;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 570081 571329 . + . ID=Thaps24359;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC32];external_name=Thaps24359;logic_name=jgi_thaps3 chr11a ensembl transcript 570081 571329 . + . ID=Thaps24359;Parent=Thaps24359;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 570081 571033 . + 0 ID=Thaps24359;Parent=Thaps24359;rank=1 chr11a . exon 570081 571033 . + . ID=Thaps24359.1;Parent=Thaps24359;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 571137 571329 . + 0 ID=Thaps24359;Parent=Thaps24359;rank=2 chr11a . exon 571137 571329 . + . ID=Thaps24359.2;Parent=Thaps24359;constitutive=1;ensembl_end_phase=1;rank=2 chr11a ensembl protein_coding_gene 575530 576659 . - . ID=Thaps36640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC34];external_name=Thaps36640;logic_name=jgi_thaps3 chr11a ensembl transcript 575530 576659 . - . ID=Thaps36640;Parent=Thaps36640;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 575530 575817 . - 0 ID=Thaps36640;Parent=Thaps36640;rank=5 chr11a . exon 575530 575817 . - . ID=Thaps36640.5;Parent=Thaps36640;constitutive=1;rank=5 chr11a . CDS 575894 576088 . - 0 ID=Thaps36640;Parent=Thaps36640;rank=4 chr11a . exon 575894 576088 . - . ID=Thaps36640.4;Parent=Thaps36640;constitutive=1;rank=4 chr11a . CDS 576171 576365 . - 0 ID=Thaps36640;Parent=Thaps36640;rank=3 chr11a . exon 576171 576365 . - . ID=Thaps36640.3;Parent=Thaps36640;constitutive=1;rank=3 chr11a . CDS 576442 576462 . - 0 ID=Thaps36640;Parent=Thaps36640;rank=2 chr11a . exon 576442 576462 . - . ID=Thaps36640.2;Parent=Thaps36640;constitutive=1;rank=2 chr11a . CDS 576546 576659 . - 0 ID=Thaps36640;Parent=Thaps36640;rank=1 chr11a . exon 576546 576659 . - . ID=Thaps36640.1;Parent=Thaps36640;constitutive=1;rank=1 chr11a . repeat_region 577661 577668 . ? . description=dust chr11a ensembl protein_coding_gene 579462 581063 . - . ID=Thaps24361;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC35];external_name=Thaps24361;logic_name=jgi_thaps3 chr11a ensembl transcript 579462 581063 . - . ID=Thaps24361;Parent=Thaps24361;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 579462 581063 . - 0 ID=Thaps24361;Parent=Thaps24361;rank=1 chr11a . exon 579462 581063 . - . ID=Thaps24361.1;Parent=Thaps24361;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 581425 582693 . + . ID=Thaps24362;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC36];external_name=Thaps24362;logic_name=jgi_thaps3 chr11a ensembl transcript 581425 582693 . + . ID=Thaps24362;Parent=Thaps24362;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 581425 582693 . + 0 ID=Thaps24362;Parent=Thaps24362;rank=1 chr11a . exon 581425 582693 . + . ID=Thaps24362.1;Parent=Thaps24362;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 582758 586697 . - . ID=Thaps24363;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC37];external_name=Thaps24363;logic_name=jgi_thaps3 chr11a ensembl transcript 582758 586697 . - . ID=Thaps24363;Parent=Thaps24363;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 582758 585969 . - 0 ID=Thaps24363;Parent=Thaps24363;rank=4 chr11a . exon 582758 585969 . - . ID=Thaps24363.4;Parent=Thaps24363;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 586037 586113 . - 0 ID=Thaps24363;Parent=Thaps24363;rank=3 chr11a . exon 586037 586113 . - . ID=Thaps24363.3;Parent=Thaps24363;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 586208 586361 . - 0 ID=Thaps24363;Parent=Thaps24363;rank=2 chr11a . exon 586208 586361 . - . ID=Thaps24363.2;Parent=Thaps24363;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 586571 586697 . - 0 ID=Thaps24363;Parent=Thaps24363;rank=1 chr11a . exon 586571 586697 . - . ID=Thaps24363.1;Parent=Thaps24363;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 587316 588308 . - . ID=Thaps8806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC38];external_name=Thaps8806;logic_name=jgi_thaps3 chr11a ensembl transcript 587316 588308 . - . ID=Thaps8806;Parent=Thaps8806;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 587316 588308 . - 0 ID=Thaps8806;Parent=Thaps8806;rank=1 chr11a . exon 587316 588308 . - . ID=Thaps8806.1;Parent=Thaps8806;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 588637 589896 . - . ID=Thaps8807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC39];external_name=Thaps8807;logic_name=jgi_thaps3 chr11a ensembl transcript 588637 589896 . - . ID=Thaps8807;Parent=Thaps8807;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 588637 589896 . - 0 ID=Thaps8807;Parent=Thaps8807;rank=1 chr11a . exon 588637 589896 . - . ID=Thaps8807.1;Parent=Thaps8807;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 590446 591729 . + . ID=Thaps8808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC40];external_name=Thaps8808;logic_name=jgi_thaps3 chr11a ensembl transcript 590446 591729 . + . ID=Thaps8808;Parent=Thaps8808;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 590446 590966 . + 0 ID=Thaps8808;Parent=Thaps8808;rank=1 chr11a . exon 590446 590966 . + . ID=Thaps8808.1;Parent=Thaps8808;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 591087 591729 . + 0 ID=Thaps8808;Parent=Thaps8808;rank=2 chr11a . exon 591087 591729 . + . ID=Thaps8808.2;Parent=Thaps8808;constitutive=1;ensembl_end_phase=1;rank=2 chr11a ensembl protein_coding_gene 591900 592547 . - . ID=Thaps8809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC41];external_name=Thaps8809;logic_name=jgi_thaps3 chr11a ensembl transcript 591900 592547 . - . ID=Thaps8809;Parent=Thaps8809;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 591900 592547 . - 0 ID=Thaps8809;Parent=Thaps8809;rank=1 chr11a . exon 591900 592547 . - . ID=Thaps8809.1;Parent=Thaps8809;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 592761 593378 . + . ID=Thaps8810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC42];external_name=Thaps8810;logic_name=jgi_thaps3 chr11a ensembl transcript 592761 593378 . + . ID=Thaps8810;Parent=Thaps8810;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 592761 593378 . + 0 ID=Thaps8810;Parent=Thaps8810;rank=1 chr11a . exon 592761 593378 . + . ID=Thaps8810.1;Parent=Thaps8810;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 593475 595277 . - . ID=Thaps8811;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC43];external_name=Thaps8811;logic_name=jgi_thaps3 chr11a ensembl transcript 593475 595277 . - . ID=Thaps8811;Parent=Thaps8811;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 593475 595277 . - 0 ID=Thaps8811;Parent=Thaps8811;rank=1 chr11a . exon 593475 595277 . - . ID=Thaps8811.1;Parent=Thaps8811;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 595843 596714 . + . ID=Thaps8812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC44];external_name=Thaps8812;logic_name=jgi_thaps3 chr11a ensembl transcript 595843 596714 . + . ID=Thaps8812;Parent=Thaps8812;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 595843 595969 . + 0 ID=Thaps8812;Parent=Thaps8812;rank=1 chr11a . exon 595843 595969 . + . ID=Thaps8812.1;Parent=Thaps8812;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 596201 596539 . + 0 ID=Thaps8812;Parent=Thaps8812;rank=2 chr11a . exon 596201 596539 . + . ID=Thaps8812.2;Parent=Thaps8812;constitutive=1;rank=2 chr11a . CDS 596686 596714 . + 0 ID=Thaps8812;Parent=Thaps8812;rank=3 chr11a . exon 596686 596714 . + . ID=Thaps8812.3;Parent=Thaps8812;constitutive=1;ensembl_end_phase=2;rank=3 chr11a ensembl protein_coding_gene 596897 604461 . - . ID=Thaps8813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC45];external_name=Thaps8813;logic_name=jgi_thaps3 chr11a ensembl transcript 596897 604461 . - . ID=Thaps8813;Parent=Thaps8813;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 596897 598285 . - 0 ID=Thaps8813;Parent=Thaps8813;rank=9 chr11a . exon 596897 598285 . - . ID=Thaps8813.9;Parent=Thaps8813;constitutive=1;rank=9 chr11a . CDS 598361 600835 . - 0 ID=Thaps8813;Parent=Thaps8813;rank=8 chr11a . CDS 600949 601321 . - 0 ID=Thaps8813;Parent=Thaps8813;rank=7 chr11a . CDS 601501 601551 . - 0 ID=Thaps8813;Parent=Thaps8813;rank=6 chr11a . CDS 601622 601734 . - 0 ID=Thaps8813;Parent=Thaps8813;rank=5 chr11a . CDS 601794 604013 . - 0 ID=Thaps8813;Parent=Thaps8813;rank=4 chr11a . CDS 604092 604148 . - 0 ID=Thaps8813;Parent=Thaps8813;rank=3 chr11a . CDS 604187 604247 . - 0 ID=Thaps8813;Parent=Thaps8813;rank=2 chr11a . CDS 604292 604461 . - 0 ID=Thaps8813;Parent=Thaps8813;rank=1 chr11a . repeat_region 603243 603261 . ? . description=dust chr11a ensembl protein_coding_gene 604560 606674 . + . ID=Thaps24364;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC46];external_name=Thaps24364;logic_name=jgi_thaps3 chr11a ensembl transcript 604560 606674 . + . ID=Thaps24364;Parent=Thaps24364;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 604560 606083 . + 0 ID=Thaps24364;Parent=Thaps24364;rank=1 chr11a . exon 604560 606083 . + . ID=Thaps24364.1;Parent=Thaps24364;constitutive=1;rank=1 chr11a . CDS 606165 606674 . + 0 ID=Thaps24364;Parent=Thaps24364;rank=2 chr11a . exon 606165 606674 . + . ID=Thaps24364.2;Parent=Thaps24364;constitutive=1;rank=2 chr11a . exon 598361 600835 . - . ID=Thaps8813.8;Parent=Thaps8813;constitutive=1;rank=8 chr11a . exon 600949 601321 . - . ID=Thaps8813.7;Parent=Thaps8813;constitutive=1;ensembl_end_phase=1;rank=7 chr11a . exon 601501 601551 . - . ID=Thaps8813.6;Parent=Thaps8813;constitutive=1;rank=6 chr11a . exon 601622 601734 . - . ID=Thaps8813.5;Parent=Thaps8813;constitutive=1;ensembl_end_phase=2;rank=5 chr11a . exon 601794 604013 . - . ID=Thaps8813.4;Parent=Thaps8813;constitutive=1;rank=4 chr11a . exon 604092 604148 . - . ID=Thaps8813.3;Parent=Thaps8813;constitutive=1;rank=3 chr11a . exon 604187 604247 . - . ID=Thaps8813.2;Parent=Thaps8813;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . exon 604292 604461 . - . ID=Thaps8813.1;Parent=Thaps8813;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . repeat_region 612477 612719 . ? . description=trf chr11a . repeat_region 612980 613023 . ? . description=trf chr11a ensembl protein_coding_gene 612265 612831 . + . ID=Thaps24366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC48];external_name=Thaps24366;logic_name=jgi_thaps3 chr11a ensembl transcript 612265 612831 . + . ID=Thaps24366;Parent=Thaps24366;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 612265 612831 . + 0 ID=Thaps24366;Parent=Thaps24366;rank=1 chr11a . exon 612265 612831 . + . ID=Thaps24366.1;Parent=Thaps24366;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 612996 615005 . - . ID=Thaps24367;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC49];external_name=Thaps24367;logic_name=jgi_thaps3 chr11a ensembl transcript 612996 615005 . - . ID=Thaps24367;Parent=Thaps24367;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 612996 615005 . - 0 ID=Thaps24367;Parent=Thaps24367;rank=1 chr11a . exon 612996 615005 . - . ID=Thaps24367.1;Parent=Thaps24367;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 608636 609384 . + . ID=Thaps269572;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC47];external_name=Thaps269572;logic_name=jgi_thaps3 chr11a ensembl transcript 608636 609384 . + . ID=Thaps269572;Parent=Thaps269572;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 608636 608817 . + 0 ID=Thaps269572;Parent=Thaps269572;rank=1 chr11a . exon 608636 608817 . + . ID=Thaps269572.1;Parent=Thaps269572;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 608916 609055 . + 0 ID=Thaps269572;Parent=Thaps269572;rank=2 chr11a . exon 608916 609055 . + . ID=Thaps269572.2;Parent=Thaps269572;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 609083 609384 . + 0 ID=Thaps269572;Parent=Thaps269572;rank=3 chr11a . exon 609083 609384 . + . ID=Thaps269572.3;Parent=Thaps269572;constitutive=1;ensembl_end_phase=2;rank=3 chr11a ensembl protein_coding_gene 615800 617275 . + . ID=Thaps8819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC50];external_name=Thaps8819;logic_name=jgi_thaps3 chr11a ensembl transcript 615800 617275 . + . ID=Thaps8819;Parent=Thaps8819;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 615800 617021 . + 0 ID=Thaps8819;Parent=Thaps8819;rank=1 chr11a . exon 615800 617021 . + . ID=Thaps8819.1;Parent=Thaps8819;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 617100 617275 . + 0 ID=Thaps8819;Parent=Thaps8819;rank=2 chr11a . repeat_region 621686 621707 . ? . description=dust chr11a ensembl protein_coding_gene 623980 626016 . - . ID=Thaps263810;biotype=protein_coding;external_name=Thaps263810;logic_name=jgi_thaps3 chr11a ensembl transcript 623980 626016 . - . ID=Thaps263810;Parent=Thaps263810;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 623980 624167 . - 0 ID=Thaps263810;Parent=Thaps263810;rank=6 chr11a . exon 623980 624167 . - . ID=Thaps263810.6;Parent=Thaps263810;constitutive=1;ensembl_end_phase=2;rank=6 chr11a . CDS 624246 624738 . - 0 ID=Thaps263810;Parent=Thaps263810;rank=5 chr11a . exon 624246 624738 . - . ID=Thaps263810.5;Parent=Thaps263810;constitutive=1;ensembl_end_phase=1;rank=5 chr11a . CDS 624817 625135 . - 0 ID=Thaps263810;Parent=Thaps263810;rank=4 chr11a . exon 624817 625135 . - . ID=Thaps263810.4;Parent=Thaps263810;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 625310 625663 . - 0 ID=Thaps263810;Parent=Thaps263810;rank=3 chr11a . exon 625310 625663 . - . ID=Thaps263810.3;Parent=Thaps263810;constitutive=1;rank=3 chr11a . CDS 625805 625887 . - 0 ID=Thaps263810;Parent=Thaps263810;rank=2 chr11a . exon 625805 625887 . - . ID=Thaps263810.2;Parent=Thaps263810;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 625993 626016 . - 0 ID=Thaps263810;Parent=Thaps263810;rank=1 chr11a . exon 625993 626016 . - . ID=Thaps263810.1;Parent=Thaps263810;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 622182 623715 . + . ID=Thaps269573;biotype=protein_coding;description=Probable papain cyctein protease [Source:UniProtKB/TrEMBL%3BAcc:B8LC53];external_name=Thaps269573;logic_name=jgi_thaps3 chr11a ensembl transcript 622182 623715 . + . ID=Thaps269573;Parent=Thaps269573;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 622182 622308 . + 0 ID=Thaps269573;Parent=Thaps269573;rank=1 chr11a . exon 622182 622308 . + . ID=Thaps269573.1;Parent=Thaps269573;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 622437 622553 . + 0 ID=Thaps269573;Parent=Thaps269573;rank=2 chr11a . exon 622437 622553 . + . ID=Thaps269573.2;Parent=Thaps269573;constitutive=1;rank=2 chr11a . CDS 622626 622749 . + 0 ID=Thaps269573;Parent=Thaps269573;rank=3 chr11a . exon 622626 622749 . + . ID=Thaps269573.3;Parent=Thaps269573;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 622890 623244 . + 0 ID=Thaps269573;Parent=Thaps269573;rank=4 chr11a . exon 622890 623244 . + . ID=Thaps269573.4;Parent=Thaps269573;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 623326 623542 . + 0 ID=Thaps269573;Parent=Thaps269573;rank=5 chr11a . exon 623326 623542 . + . ID=Thaps269573.5;Parent=Thaps269573;constitutive=1;ensembl_end_phase=1;rank=5 chr11a . CDS 623618 623715 . + 0 ID=Thaps269573;Parent=Thaps269573;rank=6 chr11a . exon 623618 623715 . + . ID=Thaps269573.6;Parent=Thaps269573;constitutive=1;ensembl_end_phase=2;rank=6 chr11a . exon 617100 617275 . + . ID=Thaps8819.2;Parent=Thaps8819;constitutive=1;ensembl_end_phase=2;rank=2 chr11a ensembl protein_coding_gene 617603 619789 . + . ID=Thaps8820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC51];external_name=Thaps8820;logic_name=jgi_thaps3 chr11a ensembl transcript 617603 619789 . + . ID=Thaps8820;Parent=Thaps8820;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 617603 619789 . + 0 ID=Thaps8820;Parent=Thaps8820;rank=1 chr11a . exon 617603 619789 . + . ID=Thaps8820.1;Parent=Thaps8820;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 619891 621834 . - . ID=Thaps8821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC52];external_name=Thaps8821;logic_name=jgi_thaps3 chr11a ensembl transcript 619891 621834 . - . ID=Thaps8821;Parent=Thaps8821;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 619891 619929 . - 0 ID=Thaps8821;Parent=Thaps8821;rank=2 chr11a . exon 619891 619929 . - . ID=Thaps8821.2;Parent=Thaps8821;constitutive=1;rank=2 chr11a . CDS 619963 621834 . - 0 ID=Thaps8821;Parent=Thaps8821;rank=1 chr11a . exon 619963 621834 . - . ID=Thaps8821.1;Parent=Thaps8821;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 626656 629338 . + . ID=Thaps8824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC55];external_name=Thaps8824;logic_name=jgi_thaps3 chr11a ensembl transcript 626656 629338 . + . ID=Thaps8824;Parent=Thaps8824;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 626656 626976 . + 0 ID=Thaps8824;Parent=Thaps8824;rank=1 chr11a . exon 626656 626976 . + . ID=Thaps8824.1;Parent=Thaps8824;constitutive=1;rank=1 chr11a . CDS 627069 628569 . + 0 ID=Thaps8824;Parent=Thaps8824;rank=2 chr11a . CDS 628665 629338 . + 0 ID=Thaps8824;Parent=Thaps8824;rank=3 chr11a . repeat_region 634422 634460 . ? . description=trf chr11a ensembl protein_coding_gene 632679 634094 . - . ID=Thaps24369;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC57];external_name=Thaps24369;logic_name=jgi_thaps3 chr11a ensembl transcript 632679 634094 . - . ID=Thaps24369;Parent=Thaps24369;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 632679 634094 . - 0 ID=Thaps24369;Parent=Thaps24369;rank=1 chr11a . exon 632679 634094 . - . ID=Thaps24369.1;Parent=Thaps24369;constitutive=1;rank=1 chr11a . exon 627069 628569 . + . ID=Thaps8824.2;Parent=Thaps8824;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . exon 628665 629338 . + . ID=Thaps8824.3;Parent=Thaps8824;constitutive=1;ensembl_end_phase=2;rank=3 chr11a ensembl protein_coding_gene 629790 632147 . + . ID=Thaps8825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC56];external_name=Thaps8825;logic_name=jgi_thaps3 chr11a ensembl transcript 629790 632147 . + . ID=Thaps8825;Parent=Thaps8825;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 629790 632147 . + 0 ID=Thaps8825;Parent=Thaps8825;rank=1 chr11a . exon 629790 632147 . + . ID=Thaps8825.1;Parent=Thaps8825;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 634308 634877 . + . ID=Thaps8827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC58];external_name=Thaps8827;logic_name=jgi_thaps3 chr11a ensembl transcript 634308 634877 . + . ID=Thaps8827;Parent=Thaps8827;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 634308 634438 . + 0 ID=Thaps8827;Parent=Thaps8827;rank=1 chr11a . exon 634308 634438 . + . ID=Thaps8827.1;Parent=Thaps8827;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 634652 634877 . + 0 ID=Thaps8827;Parent=Thaps8827;rank=2 chr11a . exon 634652 634877 . + . ID=Thaps8827.2;Parent=Thaps8827;constitutive=1;ensembl_end_phase=1;rank=2 chr11a ensembl protein_coding_gene 635029 636750 . - . ID=Thaps8828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC59];external_name=Thaps8828;logic_name=jgi_thaps3 chr11a ensembl transcript 635029 636750 . - . ID=Thaps8828;Parent=Thaps8828;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 635029 635755 . - 0 ID=Thaps8828;Parent=Thaps8828;rank=3 chr11a . exon 635029 635755 . - . ID=Thaps8828.3;Parent=Thaps8828;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 635830 636258 . - 0 ID=Thaps8828;Parent=Thaps8828;rank=2 chr11a . exon 635830 636258 . - . ID=Thaps8828.2;Parent=Thaps8828;constitutive=1;rank=2 chr11a . CDS 636335 636750 . - 0 ID=Thaps8828;Parent=Thaps8828;rank=1 chr11a . exon 636335 636750 . - . ID=Thaps8828.1;Parent=Thaps8828;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . repeat_region 642112 642171 . ? . description=dust chr11a . repeat_region 642700 642750 . ? . description=dust chr11a ensembl protein_coding_gene 643840 645103 . + . ID=Thaps269575;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC63];external_name=Thaps269575;logic_name=jgi_thaps3 chr11a ensembl transcript 643840 645103 . + . ID=Thaps269575;Parent=Thaps269575;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 643840 644036 . + 0 ID=Thaps269575;Parent=Thaps269575;rank=1 chr11a . exon 643840 644036 . + . ID=Thaps269575.1;Parent=Thaps269575;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 644270 644369 . + 0 ID=Thaps269575;Parent=Thaps269575;rank=2 chr11a . exon 644270 644369 . + . ID=Thaps269575.2;Parent=Thaps269575;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 644447 645103 . + 0 ID=Thaps269575;Parent=Thaps269575;rank=3 chr11a . exon 644447 645103 . + . ID=Thaps269575.3;Parent=Thaps269575;constitutive=1;rank=3 chr11a ensembl protein_coding_gene 646149 646799 . - . ID=Thaps269576;biotype=protein_coding;description=N-acetyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8LC64];external_name=Thaps269576;logic_name=jgi_thaps3 chr11a ensembl transcript 646149 646799 . - . ID=Thaps269576;Parent=Thaps269576;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 646149 646329 . - 0 ID=Thaps269576;Parent=Thaps269576;rank=2 chr11a . exon 646149 646329 . - . ID=Thaps269576.2;Parent=Thaps269576;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 646453 646799 . - 0 ID=Thaps269576;Parent=Thaps269576;rank=1 chr11a . exon 646453 646799 . - . ID=Thaps269576.1;Parent=Thaps269576;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 637295 638716 . - . ID=Thaps8829;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC60];external_name=Thaps8829;logic_name=jgi_thaps3 chr11a ensembl transcript 637295 638716 . - . ID=Thaps8829;Parent=Thaps8829;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 637295 638716 . - 0 ID=Thaps8829;Parent=Thaps8829;rank=1 chr11a . exon 637295 638716 . - . ID=Thaps8829.1;Parent=Thaps8829;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 640420 641802 . - . ID=Thaps8830;biotype=protein_coding;description=Replication factor C 37 KD subunit [Source:UniProtKB/TrEMBL%3BAcc:B8LC61];external_name=RFC_1;logic_name=jgi_thaps3 chr11a ensembl transcript 640420 641802 . - . ID=Thaps8830;Parent=Thaps8830;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 640420 641083 . - 0 ID=Thaps8830;Parent=Thaps8830;rank=4 chr11a . exon 640420 641083 . - . ID=Thaps8830.4;Parent=Thaps8830;constitutive=1;ensembl_end_phase=1;rank=4 chr11a . CDS 641170 641228 . - 0 ID=Thaps8830;Parent=Thaps8830;rank=3 chr11a . exon 641170 641228 . - . ID=Thaps8830.3;Parent=Thaps8830;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 641342 641437 . - 0 ID=Thaps8830;Parent=Thaps8830;rank=2 chr11a . exon 641342 641437 . - . ID=Thaps8830.2;Parent=Thaps8830;constitutive=1;rank=2 chr11a . CDS 641611 641802 . - 0 ID=Thaps8830;Parent=Thaps8830;rank=1 chr11a . exon 641611 641802 . - . ID=Thaps8830.1;Parent=Thaps8830;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 642017 643334 . + . ID=Thaps8831;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC62];external_name=Thaps8831;logic_name=jgi_thaps3 chr11a ensembl transcript 642017 643334 . + . ID=Thaps8831;Parent=Thaps8831;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 642017 642134 . + 0 ID=Thaps8831;Parent=Thaps8831;rank=1 chr11a . exon 642017 642134 . + . ID=Thaps8831.1;Parent=Thaps8831;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 642213 642556 . + 0 ID=Thaps8831;Parent=Thaps8831;rank=2 chr11a . exon 642213 642556 . + . ID=Thaps8831.2;Parent=Thaps8831;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 642755 643258 . + 0 ID=Thaps8831;Parent=Thaps8831;rank=3 chr11a . exon 642755 643258 . + . ID=Thaps8831.3;Parent=Thaps8831;constitutive=1;rank=3 chr11a . CDS 643305 643334 . + 0 ID=Thaps8831;Parent=Thaps8831;rank=4 chr11a . exon 643305 643334 . + . ID=Thaps8831.4;Parent=Thaps8831;constitutive=1;rank=4 chr11a ensembl protein_coding_gene 647317 652003 . + . ID=Thaps24372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC65];external_name=Thaps24372;logic_name=jgi_thaps3 chr11a ensembl transcript 647317 652003 . + . ID=Thaps24372;Parent=Thaps24372;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 647317 647688 . + 0 ID=Thaps24372;Parent=Thaps24372;rank=1 chr11a . exon 647317 647688 . + . ID=Thaps24372.1;Parent=Thaps24372;constitutive=1;rank=1 chr11a . CDS 647839 648382 . + 0 ID=Thaps24372;Parent=Thaps24372;rank=2 chr11a . exon 647839 648382 . + . ID=Thaps24372.2;Parent=Thaps24372;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 648474 651020 . + 0 ID=Thaps24372;Parent=Thaps24372;rank=3 chr11a . exon 648474 651020 . + . ID=Thaps24372.3;Parent=Thaps24372;constitutive=1;rank=3 chr11a . CDS 651210 652003 . + 0 ID=Thaps24372;Parent=Thaps24372;rank=4 chr11a . exon 651210 652003 . + . ID=Thaps24372.4;Parent=Thaps24372;constitutive=1;ensembl_end_phase=2;rank=4 chr11a ensembl protein_coding_gene 652120 654090 . - . ID=Thaps8835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC66];external_name=Thaps8835;logic_name=jgi_thaps3 chr11a ensembl transcript 652120 654090 . - . ID=Thaps8835;Parent=Thaps8835;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 652120 654090 . - 0 ID=Thaps8835;Parent=Thaps8835;rank=1 chr11a . exon 652120 654090 . - . ID=Thaps8835.1;Parent=Thaps8835;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 654995 656930 . + . ID=Thaps8836;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC67];external_name=Thaps8836;logic_name=jgi_thaps3 chr11a ensembl transcript 654995 656930 . + . ID=Thaps8836;Parent=Thaps8836;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 654995 656366 . + 0 ID=Thaps8836;Parent=Thaps8836;rank=1 chr11a . exon 654995 656366 . + . ID=Thaps8836.1;Parent=Thaps8836;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 656389 656930 . + 0 ID=Thaps8836;Parent=Thaps8836;rank=2 chr11a . exon 656389 656930 . + . ID=Thaps8836.2;Parent=Thaps8836;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . repeat_region 657145 657153 . ? . description=dust chr11a . repeat_region 657581 657635 . ? . description=dust chr11a . repeat_region 659019 659039 . ? . description=dust chr11a . repeat_region 659529 659536 . ? . description=dust chr11a ensembl protein_coding_gene 657175 657612 . - . ID=Thaps24373;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC68];external_name=Thaps24373;logic_name=jgi_thaps3 chr11a ensembl transcript 657175 657612 . - . ID=Thaps24373;Parent=Thaps24373;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 657175 657612 . - 0 ID=Thaps24373;Parent=Thaps24373;rank=1 chr11a . exon 657175 657612 . - . ID=Thaps24373.1;Parent=Thaps24373;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 662591 667199 . + . ID=Thaps263816;biotype=protein_coding;description=Chromodomain-helicase [Source:UniProtKB/TrEMBL%3BAcc:B8LC70];external_name=Thaps263816;logic_name=jgi_thaps3 chr11a ensembl transcript 662591 667199 . + . ID=Thaps263816;Parent=Thaps263816;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 662591 662679 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=1 chr11a . exon 662591 662679 . + . ID=Thaps263816.1;Parent=Thaps263816;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 664280 664335 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=2 chr11a . exon 664280 664335 . + . ID=Thaps263816.2;Parent=Thaps263816;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 664560 664718 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=3 chr11a . exon 664560 664718 . + . ID=Thaps263816.3;Parent=Thaps263816;constitutive=1;rank=3 chr11a . CDS 664887 665162 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=4 chr11a . exon 664887 665162 . + . ID=Thaps263816.4;Parent=Thaps263816;constitutive=1;rank=4 chr11a . CDS 665253 665462 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=5 chr11a . exon 665253 665462 . + . ID=Thaps263816.5;Parent=Thaps263816;constitutive=1;rank=5 chr11a . CDS 665542 666165 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=6 chr11a . exon 665542 666165 . + . ID=Thaps263816.6;Parent=Thaps263816;constitutive=1;rank=6 chr11a . CDS 666244 666432 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=7 chr11a . exon 666244 666432 . + . ID=Thaps263816.7;Parent=Thaps263816;constitutive=1;rank=7 chr11a . CDS 666516 666739 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=8 chr11a . exon 666516 666739 . + . ID=Thaps263816.8;Parent=Thaps263816;constitutive=1;ensembl_end_phase=2;rank=8 chr11a . CDS 666816 666861 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=9 chr11a . exon 666816 666861 . + . ID=Thaps263816.9;Parent=Thaps263816;constitutive=1;ensembl_end_phase=1;rank=9 chr11a . CDS 667003 667199 . + 0 ID=Thaps263816;Parent=Thaps263816;rank=10 chr11a ensembl protein_coding_gene 658016 658553 . + . ID=Thaps8838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC69];external_name=Thaps8838;logic_name=jgi_thaps3 chr11a ensembl transcript 658016 658553 . + . ID=Thaps8838;Parent=Thaps8838;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 658016 658093 . + 0 ID=Thaps8838;Parent=Thaps8838;rank=1 chr11a . exon 658016 658093 . + . ID=Thaps8838.1;Parent=Thaps8838;constitutive=1;rank=1 chr11a . CDS 658182 658553 . + 0 ID=Thaps8838;Parent=Thaps8838;rank=2 chr11a . exon 658182 658553 . + . ID=Thaps8838.2;Parent=Thaps8838;constitutive=1;rank=2 chr11a . exon 667003 667199 . + . ID=Thaps263816.10;Parent=Thaps263816;constitutive=1;ensembl_end_phase=2;rank=10 chr11a ensembl protein_coding_gene 667510 668206 . + . ID=Thaps263817;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC71];external_name=Thaps263817;logic_name=jgi_thaps3 chr11a ensembl transcript 667510 668206 . + . ID=Thaps263817;Parent=Thaps263817;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 667510 667695 . + 0 ID=Thaps263817;Parent=Thaps263817;rank=1 chr11a . exon 667510 667695 . + . ID=Thaps263817.1;Parent=Thaps263817;constitutive=1;rank=1 chr11a . CDS 667772 667855 . + 0 ID=Thaps263817;Parent=Thaps263817;rank=2 chr11a . exon 667772 667855 . + . ID=Thaps263817.2;Parent=Thaps263817;constitutive=1;rank=2 chr11a . CDS 667946 668206 . + 0 ID=Thaps263817;Parent=Thaps263817;rank=3 chr11a . exon 667946 668206 . + . ID=Thaps263817.3;Parent=Thaps263817;constitutive=1;rank=3 chr11a ensembl protein_coding_gene 673819 675741 . - . ID=Thaps263819;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC74];external_name=Thaps263819;logic_name=jgi_thaps3 chr11a ensembl transcript 673819 675741 . - . ID=Thaps263819;Parent=Thaps263819;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 673819 673962 . - 0 ID=Thaps263819;Parent=Thaps263819;rank=5 chr11a . exon 673819 673962 . - . ID=Thaps263819.5;Parent=Thaps263819;constitutive=1;rank=5 chr11a . CDS 674292 674294 . - 0 ID=Thaps263819;Parent=Thaps263819;rank=4 chr11a . exon 674292 674294 . - . ID=Thaps263819.4;Parent=Thaps263819;constitutive=1;rank=4 chr11a . CDS 674308 674311 . - 0 ID=Thaps263819;Parent=Thaps263819;rank=3 chr11a . exon 674308 674311 . - . ID=Thaps263819.3;Parent=Thaps263819;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 674366 674572 . - 0 ID=Thaps263819;Parent=Thaps263819;rank=2 chr11a . exon 674366 674572 . - . ID=Thaps263819.2;Parent=Thaps263819;constitutive=1;rank=2 chr11a . CDS 674936 675741 . - 0 ID=Thaps263819;Parent=Thaps263819;rank=1 chr11a . exon 674936 675741 . - . ID=Thaps263819.1;Parent=Thaps263819;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 670982 671761 . + . ID=Thaps36686;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC72];external_name=Thaps36686;logic_name=jgi_thaps3 chr11a ensembl transcript 670982 671761 . + . ID=Thaps36686;Parent=Thaps36686;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 670982 671761 . + 0 ID=Thaps36686;Parent=Thaps36686;rank=1 chr11a . exon 670982 671761 . + . ID=Thaps36686.1;Parent=Thaps36686;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 671933 673587 . - . ID=Thaps8841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC73];external_name=Thaps8841;logic_name=jgi_thaps3 chr11a ensembl transcript 671933 673587 . - . ID=Thaps8841;Parent=Thaps8841;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 671933 672820 . - 0 ID=Thaps8841;Parent=Thaps8841;rank=3 chr11a . exon 671933 672820 . - . ID=Thaps8841.3;Parent=Thaps8841;constitutive=1;rank=3 chr11a . CDS 672945 673385 . - 0 ID=Thaps8841;Parent=Thaps8841;rank=2 chr11a . exon 672945 673385 . - . ID=Thaps8841.2;Parent=Thaps8841;constitutive=1;rank=2 chr11a . CDS 673444 673587 . - 0 ID=Thaps8841;Parent=Thaps8841;rank=1 chr11a . exon 673444 673587 . - . ID=Thaps8841.1;Parent=Thaps8841;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 676026 676769 . + . ID=Thaps8844;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC75];external_name=Thaps8844;logic_name=jgi_thaps3 chr11a ensembl transcript 676026 676769 . + . ID=Thaps8844;Parent=Thaps8844;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 676026 676769 . + 0 ID=Thaps8844;Parent=Thaps8844;rank=1 chr11a . exon 676026 676769 . + . ID=Thaps8844.1;Parent=Thaps8844;constitutive=1;rank=1 chr11a . repeat_region 677527 677546 . ? . description=trf chr11a ensembl protein_coding_gene 678761 680663 . - . ID=Thaps24375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC77];external_name=Thaps24375;logic_name=jgi_thaps3 chr11a ensembl transcript 678761 680663 . - . ID=Thaps24375;Parent=Thaps24375;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 678761 678827 . - 0 ID=Thaps24375;Parent=Thaps24375;rank=2 chr11a . exon 678761 678827 . - . ID=Thaps24375.2;Parent=Thaps24375;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 678925 680663 . - 0 ID=Thaps24375;Parent=Thaps24375;rank=1 chr11a . exon 678925 680663 . - . ID=Thaps24375.1;Parent=Thaps24375;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 681288 683132 . + . ID=Thaps24376;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC78];external_name=Thaps24376;logic_name=jgi_thaps3 chr11a ensembl transcript 681288 683132 . + . ID=Thaps24376;Parent=Thaps24376;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 681288 683132 . + 0 ID=Thaps24376;Parent=Thaps24376;rank=1 chr11a . exon 681288 683132 . + . ID=Thaps24376.1;Parent=Thaps24376;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 684024 686015 . - . ID=Thaps24377;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC79];external_name=Thaps24377;logic_name=jgi_thaps3 chr11a ensembl transcript 684024 686015 . - . ID=Thaps24377;Parent=Thaps24377;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 684024 684086 . - 0 ID=Thaps24377;Parent=Thaps24377;rank=5 chr11a . exon 684024 684086 . - . ID=Thaps24377.5;Parent=Thaps24377;constitutive=1;rank=5 chr11a . CDS 684167 684381 . - 0 ID=Thaps24377;Parent=Thaps24377;rank=4 chr11a . exon 684167 684381 . - . ID=Thaps24377.4;Parent=Thaps24377;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 684473 684509 . - 0 ID=Thaps24377;Parent=Thaps24377;rank=3 chr11a . exon 684473 684509 . - . ID=Thaps24377.3;Parent=Thaps24377;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 684581 685319 . - 0 ID=Thaps24377;Parent=Thaps24377;rank=2 chr11a . exon 684581 685319 . - . ID=Thaps24377.2;Parent=Thaps24377;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 685444 686015 . - 0 ID=Thaps24377;Parent=Thaps24377;rank=1 chr11a . exon 685444 686015 . - . ID=Thaps24377.1;Parent=Thaps24377;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 677187 678138 . - . ID=Thaps8845;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC76];external_name=Thaps8845;logic_name=jgi_thaps3 chr11a ensembl transcript 677187 678138 . - . ID=Thaps8845;Parent=Thaps8845;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 677187 677812 . - 0 ID=Thaps8845;Parent=Thaps8845;rank=2 chr11a . exon 677187 677812 . - . ID=Thaps8845.2;Parent=Thaps8845;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 677847 678138 . - 0 ID=Thaps8845;Parent=Thaps8845;rank=1 chr11a . exon 677847 678138 . - . ID=Thaps8845.1;Parent=Thaps8845;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 686353 687443 . + . ID=Thaps8849;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC80];external_name=Thaps8849;logic_name=jgi_thaps3 chr11a ensembl transcript 686353 687443 . + . ID=Thaps8849;Parent=Thaps8849;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 686353 687084 . + 0 ID=Thaps8849;Parent=Thaps8849;rank=1 chr11a . exon 686353 687084 . + . ID=Thaps8849.1;Parent=Thaps8849;constitutive=1;rank=1 chr11a . CDS 687168 687443 . + 0 ID=Thaps8849;Parent=Thaps8849;rank=2 chr11a ensembl protein_coding_gene 693094 695166 . + . ID=Thaps263820;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBG1];external_name=Thaps263820;logic_name=jgi_thaps3 chr11a ensembl transcript 693094 695166 . + . ID=Thaps263820;Parent=Thaps263820;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 693094 693327 . + 0 ID=Thaps263820;Parent=Thaps263820;rank=1 chr11a . exon 693094 693327 . + . ID=Thaps263820.1;Parent=Thaps263820;constitutive=1;rank=1 chr11a . CDS 693565 693819 . + 0 ID=Thaps263820;Parent=Thaps263820;rank=2 chr11a . exon 693565 693819 . + . ID=Thaps263820.2;Parent=Thaps263820;constitutive=1;rank=2 chr11a . CDS 695056 695166 . + 0 ID=Thaps263820;Parent=Thaps263820;rank=3 chr11a . exon 695056 695166 . + . ID=Thaps263820.3;Parent=Thaps263820;constitutive=1;rank=3 chr11a ensembl protein_coding_gene 689084 689983 . + . ID=Thaps36738;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LC81];external_name=Thaps36738;logic_name=jgi_thaps3 chr11a ensembl transcript 689084 689983 . + . ID=Thaps36738;Parent=Thaps36738;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 689084 689983 . + 0 ID=Thaps36738;Parent=Thaps36738;rank=1 chr11a . exon 689084 689983 . + . ID=Thaps36738.1;Parent=Thaps36738;constitutive=1;rank=1 chr11a . exon 687168 687443 . + . ID=Thaps8849.2;Parent=Thaps8849;constitutive=1;rank=2 chr11a . repeat_region 702792 702828 . ? . description=trf chr11a ensembl protein_coding_gene 699218 701075 . + . ID=Thaps24379;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBG2];external_name=Thaps24379;logic_name=jgi_thaps3 chr11a ensembl transcript 699218 701075 . + . ID=Thaps24379;Parent=Thaps24379;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 699218 699272 . + 0 ID=Thaps24379;Parent=Thaps24379;rank=1 chr11a . exon 699218 699272 . + . ID=Thaps24379.1;Parent=Thaps24379;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 699819 700489 . + 0 ID=Thaps24379;Parent=Thaps24379;rank=2 chr11a . exon 699819 700489 . + . ID=Thaps24379.2;Parent=Thaps24379;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 700571 700852 . + 0 ID=Thaps24379;Parent=Thaps24379;rank=3 chr11a . exon 700571 700852 . + . ID=Thaps24379.3;Parent=Thaps24379;constitutive=1;rank=3 chr11a . CDS 700956 701075 . + 0 ID=Thaps24379;Parent=Thaps24379;rank=4 chr11a . exon 700956 701075 . + . ID=Thaps24379.4;Parent=Thaps24379;constitutive=1;rank=4 chr11a ensembl protein_coding_gene 704242 705744 . + . ID=Thaps24381;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBG5];external_name=Thaps24381;logic_name=jgi_thaps3 chr11a ensembl transcript 704242 705744 . + . ID=Thaps24381;Parent=Thaps24381;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 704242 705744 . + 0 ID=Thaps24381;Parent=Thaps24381;rank=1 chr11a . exon 704242 705744 . + . ID=Thaps24381.1;Parent=Thaps24381;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 701221 702477 . - . ID=Thaps42000;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBG3];external_name=Thaps42000;logic_name=jgi_thaps3 chr11a ensembl transcript 701221 702477 . - . ID=Thaps42000;Parent=Thaps42000;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 701221 702477 . - 0 ID=Thaps42000;Parent=Thaps42000;rank=1 chr11a . exon 701221 702477 . - . ID=Thaps42000.1;Parent=Thaps42000;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 702497 702798 . - . ID=Thaps8853;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBG4];external_name=Thaps8853;logic_name=jgi_thaps3 chr11a ensembl transcript 702497 702798 . - . ID=Thaps8853;Parent=Thaps8853;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 702497 702798 . - 0 ID=Thaps8853;Parent=Thaps8853;rank=1 chr11a . exon 702497 702798 . - . ID=Thaps8853.1;Parent=Thaps8853;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 706082 708921 . - . ID=Thaps8855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBG6];external_name=Thaps8855;logic_name=jgi_thaps3 chr11a ensembl transcript 706082 708921 . - . ID=Thaps8855;Parent=Thaps8855;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 706082 706167 . - 0 ID=Thaps8855;Parent=Thaps8855;rank=4 chr11a . exon 706082 706167 . - . ID=Thaps8855.4;Parent=Thaps8855;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 706245 706504 . - 0 ID=Thaps8855;Parent=Thaps8855;rank=3 chr11a . exon 706245 706504 . - . ID=Thaps8855.3;Parent=Thaps8855;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 706623 708135 . - 0 ID=Thaps8855;Parent=Thaps8855;rank=2 chr11a . exon 706623 708135 . - . ID=Thaps8855.2;Parent=Thaps8855;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 708456 708921 . - 0 ID=Thaps8855;Parent=Thaps8855;rank=1 chr11a . repeat_region 713824 713869 . ? . description=dust chr11a ensembl protein_coding_gene 709288 711097 . + . ID=Thaps24382;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBG7];external_name=Thaps24382;logic_name=jgi_thaps3 chr11a ensembl transcript 709288 711097 . + . ID=Thaps24382;Parent=Thaps24382;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 709288 709983 . + 0 ID=Thaps24382;Parent=Thaps24382;rank=1 chr11a . exon 709288 709983 . + . ID=Thaps24382.1;Parent=Thaps24382;constitutive=1;rank=1 chr11a . CDS 710086 710150 . + 0 ID=Thaps24382;Parent=Thaps24382;rank=2 chr11a . exon 710086 710150 . + . ID=Thaps24382.2;Parent=Thaps24382;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 710248 711097 . + 0 ID=Thaps24382;Parent=Thaps24382;rank=3 chr11a . exon 710248 711097 . + . ID=Thaps24382.3;Parent=Thaps24382;constitutive=1;ensembl_end_phase=1;rank=3 chr11a ensembl protein_coding_gene 711441 712946 . - . ID=Thaps24383;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBG8];external_name=Thaps24383;logic_name=jgi_thaps3 chr11a ensembl transcript 711441 712946 . - . ID=Thaps24383;Parent=Thaps24383;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 711441 711533 . - 0 ID=Thaps24383;Parent=Thaps24383;rank=2 chr11a . exon 711441 711533 . - . ID=Thaps24383.2;Parent=Thaps24383;constitutive=1;rank=2 chr11a . CDS 711627 712946 . - 0 ID=Thaps24383;Parent=Thaps24383;rank=1 chr11a . exon 711627 712946 . - . ID=Thaps24383.1;Parent=Thaps24383;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 715153 716565 . - . ID=Thaps24384;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBH0];external_name=Thaps24384;logic_name=jgi_thaps3 chr11a ensembl transcript 715153 716565 . - . ID=Thaps24384;Parent=Thaps24384;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 715153 716565 . - 0 ID=Thaps24384;Parent=Thaps24384;rank=1 chr11a . exon 715153 716565 . - . ID=Thaps24384.1;Parent=Thaps24384;constitutive=1;rank=1 chr11a . exon 708456 708921 . - . ID=Thaps8855.1;Parent=Thaps8855;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 713462 714890 . + . ID=Thaps8858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBG9];external_name=Thaps8858;logic_name=jgi_thaps3 chr11a ensembl transcript 713462 714890 . + . ID=Thaps8858;Parent=Thaps8858;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 713462 714148 . + 0 ID=Thaps8858;Parent=Thaps8858;rank=1 chr11a . exon 713462 714148 . + . ID=Thaps8858.1;Parent=Thaps8858;constitutive=1;rank=1 chr11a . CDS 714318 714890 . + 0 ID=Thaps8858;Parent=Thaps8858;rank=2 chr11a . exon 714318 714890 . + . ID=Thaps8858.2;Parent=Thaps8858;constitutive=1;rank=2 chr11a . repeat_region 722602 722627 . ? . description=trf chr11a ensembl protein_coding_gene 721707 722174 . + . ID=Thaps24385;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBH4];external_name=Thaps24385;logic_name=jgi_thaps3 chr11a ensembl transcript 721707 722174 . + . ID=Thaps24385;Parent=Thaps24385;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 721707 722174 . + 0 ID=Thaps24385;Parent=Thaps24385;rank=1 chr11a . exon 721707 722174 . + . ID=Thaps24385.1;Parent=Thaps24385;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 722889 723965 . - . ID=Thaps36684;biotype=protein_coding;description=Signal recognition particle alpha [Source:UniProtKB/TrEMBL%3BAcc:B8LBH5];external_name=Thaps36684;logic_name=jgi_thaps3 chr11a ensembl transcript 722889 723965 . - . ID=Thaps36684;Parent=Thaps36684;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 722889 722921 . - 0 ID=Thaps36684;Parent=Thaps36684;rank=3 chr11a . exon 722889 722921 . - . ID=Thaps36684.3;Parent=Thaps36684;constitutive=1;rank=3 chr11a . CDS 723027 723667 . - 0 ID=Thaps36684;Parent=Thaps36684;rank=2 chr11a . exon 723027 723667 . - . ID=Thaps36684.2;Parent=Thaps36684;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 723779 723965 . - 0 ID=Thaps36684;Parent=Thaps36684;rank=1 chr11a . exon 723779 723965 . - . ID=Thaps36684.1;Parent=Thaps36684;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 725191 726927 . + . ID=Thaps687;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBH6];external_name=Thaps687;logic_name=jgi_thaps3 chr11a ensembl transcript 725191 726927 . + . ID=Thaps687;Parent=Thaps687;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 725191 725380 . + 0 ID=Thaps687;Parent=Thaps687;rank=1 chr11a . exon 725191 725380 . + . ID=Thaps687.1;Parent=Thaps687;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 725501 725547 . + 0 ID=Thaps687;Parent=Thaps687;rank=2 chr11a . exon 725501 725547 . + . ID=Thaps687.2;Parent=Thaps687;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 725653 726201 . + 0 ID=Thaps687;Parent=Thaps687;rank=3 chr11a . exon 725653 726201 . + . ID=Thaps687.3;Parent=Thaps687;constitutive=1;rank=3 chr11a . CDS 726265 726546 . + 0 ID=Thaps687;Parent=Thaps687;rank=4 chr11a . exon 726265 726546 . + . ID=Thaps687.4;Parent=Thaps687;constitutive=1;rank=4 chr11a . CDS 726629 726632 . + 0 ID=Thaps687;Parent=Thaps687;rank=5 chr11a . CDS 726662 726927 . + 0 ID=Thaps687;Parent=Thaps687;rank=6 chr11a ensembl protein_coding_gene 716971 717951 . + . ID=Thaps8860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBH1];external_name=Thaps8860;logic_name=jgi_thaps3 chr11a ensembl transcript 716971 717951 . + . ID=Thaps8860;Parent=Thaps8860;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 716971 717951 . + 0 ID=Thaps8860;Parent=Thaps8860;rank=1 chr11a . exon 716971 717951 . + . ID=Thaps8860.1;Parent=Thaps8860;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 718055 719118 . - . ID=Thaps8861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBH2];external_name=Thaps8861;logic_name=jgi_thaps3 chr11a ensembl transcript 718055 719118 . - . ID=Thaps8861;Parent=Thaps8861;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 718055 718263 . - 0 ID=Thaps8861;Parent=Thaps8861;rank=4 chr11a . exon 718055 718263 . - . ID=Thaps8861.4;Parent=Thaps8861;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 718340 718788 . - 0 ID=Thaps8861;Parent=Thaps8861;rank=3 chr11a . exon 718340 718788 . - . ID=Thaps8861.3;Parent=Thaps8861;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 718880 718941 . - 0 ID=Thaps8861;Parent=Thaps8861;rank=2 chr11a . exon 718880 718941 . - . ID=Thaps8861.2;Parent=Thaps8861;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 719020 719118 . - 0 ID=Thaps8861;Parent=Thaps8861;rank=1 chr11a . exon 719020 719118 . - . ID=Thaps8861.1;Parent=Thaps8861;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 720441 721385 . - . ID=Thaps8862;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBH3];external_name=Thaps8862;logic_name=jgi_thaps3 chr11a ensembl transcript 720441 721385 . - . ID=Thaps8862;Parent=Thaps8862;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 720441 721385 . - 0 ID=Thaps8862;Parent=Thaps8862;rank=1 chr11a . exon 720441 721385 . - . ID=Thaps8862.1;Parent=Thaps8862;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 730364 731110 . - . ID=Thaps24386;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBI0];external_name=Thaps24386;logic_name=jgi_thaps3 chr11a ensembl transcript 730364 731110 . - . ID=Thaps24386;Parent=Thaps24386;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 730364 731110 . - 0 ID=Thaps24386;Parent=Thaps24386;rank=1 chr11a . exon 730364 731110 . - . ID=Thaps24386.1;Parent=Thaps24386;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 731488 733342 . + . ID=Thaps24387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBI1];external_name=Thaps24387;logic_name=jgi_thaps3 chr11a ensembl transcript 731488 733342 . + . ID=Thaps24387;Parent=Thaps24387;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 731488 732068 . + 0 ID=Thaps24387;Parent=Thaps24387;rank=1 chr11a . exon 731488 732068 . + . ID=Thaps24387.1;Parent=Thaps24387;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 732298 733167 . + 0 ID=Thaps24387;Parent=Thaps24387;rank=2 chr11a . exon 732298 733167 . + . ID=Thaps24387.2;Parent=Thaps24387;constitutive=1;rank=2 chr11a . CDS 733255 733342 . + 0 ID=Thaps24387;Parent=Thaps24387;rank=3 chr11a . exon 733255 733342 . + . ID=Thaps24387.3;Parent=Thaps24387;constitutive=1;ensembl_end_phase=1;rank=3 chr11a ensembl protein_coding_gene 728944 729408 . - . ID=Thaps36679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBH8];external_name=Thaps36679;logic_name=jgi_thaps3 chr11a ensembl transcript 728944 729408 . - . ID=Thaps36679;Parent=Thaps36679;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 728944 729408 . - 0 ID=Thaps36679;Parent=Thaps36679;rank=1 chr11a . exon 728944 729408 . - . ID=Thaps36679.1;Parent=Thaps36679;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 734324 735897 . + . ID=Thaps36716;biotype=protein_coding;description=Dihydrolipoyl dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8LBI2];external_name=LPD;logic_name=jgi_thaps3 chr11a ensembl transcript 734324 735897 . + . ID=Thaps36716;Parent=Thaps36716;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 734324 734753 . + 0 ID=Thaps36716;Parent=Thaps36716;rank=1 chr11a . exon 734324 734753 . + . ID=Thaps36716.1;Parent=Thaps36716;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 734915 735897 . + 0 ID=Thaps36716;Parent=Thaps36716;rank=2 chr11a . exon 734915 735897 . + . ID=Thaps36716.2;Parent=Thaps36716;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . exon 726629 726632 . + . ID=Thaps687.5;Parent=Thaps687;constitutive=1;ensembl_end_phase=1;rank=5 chr11a . exon 726662 726927 . + . ID=Thaps687.6;Parent=Thaps687;constitutive=1;ensembl_end_phase=2;rank=6 chr11a ensembl protein_coding_gene 727164 728112 . + . ID=Thaps8866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBH7];external_name=Thaps8866;logic_name=jgi_thaps3 chr11a ensembl transcript 727164 728112 . + . ID=Thaps8866;Parent=Thaps8866;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 727164 727912 . + 0 ID=Thaps8866;Parent=Thaps8866;rank=1 chr11a . exon 727164 727912 . + . ID=Thaps8866.1;Parent=Thaps8866;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 727962 728112 . + 0 ID=Thaps8866;Parent=Thaps8866;rank=2 chr11a . exon 727962 728112 . + . ID=Thaps8866.2;Parent=Thaps8866;constitutive=1;ensembl_end_phase=1;rank=2 chr11a ensembl protein_coding_gene 729930 730247 . + . ID=Thaps8868;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBH9];external_name=Thaps8868;logic_name=jgi_thaps3 chr11a ensembl transcript 729930 730247 . + . ID=Thaps8868;Parent=Thaps8868;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 729930 730247 . + 0 ID=Thaps8868;Parent=Thaps8868;rank=1 chr11a . exon 729930 730247 . + . ID=Thaps8868.1;Parent=Thaps8868;constitutive=1;rank=1 chr11a . repeat_region 739569 739609 . ? . description=trf chr11a . repeat_region 739627 739654 . ? . description=dust chr11a ensembl protein_coding_gene 740559 740759 . + . ID=Thaps263826;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBI4];external_name=Thaps263826;logic_name=jgi_thaps3 chr11a ensembl transcript 740559 740759 . + . ID=Thaps263826;Parent=Thaps263826;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 740559 740759 . + 0 ID=Thaps263826;Parent=Thaps263826;rank=1 chr11a . exon 740559 740759 . + . ID=Thaps263826.1;Parent=Thaps263826;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 736787 737869 . - . ID=Thaps8872;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBI3];external_name=Thaps8872;logic_name=jgi_thaps3 chr11a ensembl transcript 736787 737869 . - . ID=Thaps8872;Parent=Thaps8872;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 736787 737397 . - 0 ID=Thaps8872;Parent=Thaps8872;rank=2 chr11a . exon 736787 737397 . - . ID=Thaps8872.2;Parent=Thaps8872;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 737785 737869 . - 0 ID=Thaps8872;Parent=Thaps8872;rank=1 chr11a . exon 737785 737869 . - . ID=Thaps8872.1;Parent=Thaps8872;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 742337 744034 . + . ID=Thaps8874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBI5];external_name=Thaps8874;logic_name=jgi_thaps3 chr11a ensembl transcript 742337 744034 . + . ID=Thaps8874;Parent=Thaps8874;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 742337 742428 . + 0 ID=Thaps8874;Parent=Thaps8874;rank=1 chr11a . exon 742337 742428 . + . ID=Thaps8874.1;Parent=Thaps8874;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 742654 742995 . + 0 ID=Thaps8874;Parent=Thaps8874;rank=2 chr11a . exon 742654 742995 . + . ID=Thaps8874.2;Parent=Thaps8874;constitutive=1;rank=2 chr11a . CDS 743047 743170 . + 0 ID=Thaps8874;Parent=Thaps8874;rank=3 chr11a . exon 743047 743170 . + . ID=Thaps8874.3;Parent=Thaps8874;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 743328 743515 . + 0 ID=Thaps8874;Parent=Thaps8874;rank=4 chr11a . exon 743328 743515 . + . ID=Thaps8874.4;Parent=Thaps8874;constitutive=1;ensembl_end_phase=2;rank=4 chr11a . CDS 743551 744034 . + 0 ID=Thaps8874;Parent=Thaps8874;rank=5 chr11a . exon 743551 744034 . + . ID=Thaps8874.5;Parent=Thaps8874;constitutive=1;ensembl_end_phase=1;rank=5 chr11a . repeat_region 746983 748474 . + . description=tp9_ASNotSingleton chr11a ensembl protein_coding_gene 749805 750503 . + . ID=Thaps24389;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBI6];external_name=Thaps24389;logic_name=jgi_thaps3 chr11a ensembl transcript 749805 750503 . + . ID=Thaps24389;Parent=Thaps24389;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 749805 750503 . + 0 ID=Thaps24389;Parent=Thaps24389;rank=1 chr11a . exon 749805 750503 . + . ID=Thaps24389.1;Parent=Thaps24389;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 754271 754471 . - . ID=Thaps263827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF63];external_name=Thaps263827;logic_name=jgi_thaps3 chr11a ensembl transcript 754271 754471 . - . ID=Thaps263827;Parent=Thaps263827;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 754271 754471 . - 0 ID=Thaps263827;Parent=Thaps263827;rank=1 chr11a . exon 754271 754471 . - . ID=Thaps263827.1;Parent=Thaps263827;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 752111 753911 . + . ID=Thaps8877;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF62];external_name=Thaps8877;logic_name=jgi_thaps3 chr11a ensembl transcript 752111 753911 . + . ID=Thaps8877;Parent=Thaps8877;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 752111 753368 . + 0 ID=Thaps8877;Parent=Thaps8877;rank=1 chr11a . exon 752111 753368 . + . ID=Thaps8877.1;Parent=Thaps8877;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 753475 753911 . + 0 ID=Thaps8877;Parent=Thaps8877;rank=2 chr11a . exon 753475 753911 . + . ID=Thaps8877.2;Parent=Thaps8877;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . repeat_region 757647 758098 . ? . description=trf chr11a . repeat_region 760565 760605 . ? . description=trf chr11a . repeat_region 763886 763922 . ? . description=trf chr11a . repeat_region 763886 763922 . ? . description=dust chr11a . repeat_region 764609 764634 . ? . description=trf chr11a . repeat_region 764609 764634 . ? . description=dust chr11a ensembl protein_coding_gene 759824 761872 . + . ID=Thaps8879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBI9];external_name=Thaps8879;logic_name=jgi_thaps3 chr11a ensembl transcript 759824 761872 . + . ID=Thaps8879;Parent=Thaps8879;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 759824 761164 . + 0 ID=Thaps8879;Parent=Thaps8879;rank=1 chr11a . exon 759824 761164 . + . ID=Thaps8879.1;Parent=Thaps8879;constitutive=1;rank=1 chr11a . CDS 761267 761448 . + 0 ID=Thaps8879;Parent=Thaps8879;rank=2 chr11a . exon 761267 761448 . + . ID=Thaps8879.2;Parent=Thaps8879;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 761542 761872 . + 0 ID=Thaps8879;Parent=Thaps8879;rank=3 chr11a . exon 761542 761872 . + . ID=Thaps8879.3;Parent=Thaps8879;constitutive=1;ensembl_end_phase=1;rank=3 chr11a ensembl protein_coding_gene 764554 765716 . + . ID=Thaps8880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF65];external_name=Thaps8880;logic_name=jgi_thaps3 chr11a ensembl transcript 764554 765716 . + . ID=Thaps8880;Parent=Thaps8880;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 764554 764580 . + 0 ID=Thaps8880;Parent=Thaps8880;rank=1 chr11a . exon 764554 764580 . + . ID=Thaps8880.1;Parent=Thaps8880;constitutive=1;rank=1 chr11a . CDS 764751 765716 . + 0 ID=Thaps8880;Parent=Thaps8880;rank=2 chr11a . exon 764751 765716 . + . ID=Thaps8880.2;Parent=Thaps8880;constitutive=1;rank=2 chr11a ensembl protein_coding_gene 767655 769155 . - . ID=Thaps24390;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF66];external_name=Thaps24390;logic_name=jgi_thaps3 chr11a ensembl transcript 767655 769155 . - . ID=Thaps24390;Parent=Thaps24390;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 767655 768698 . - 0 ID=Thaps24390;Parent=Thaps24390;rank=2 chr11a . exon 767655 768698 . - . ID=Thaps24390.2;Parent=Thaps24390;constitutive=1;rank=2 chr11a . CDS 768823 769155 . - 0 ID=Thaps24390;Parent=Thaps24390;rank=1 chr11a . exon 768823 769155 . - . ID=Thaps24390.1;Parent=Thaps24390;constitutive=1;rank=1 chr11a ensembl protein_coding_gene 772549 773563 . - . ID=Thaps263830;biotype=protein_coding;description=Predicted proteinPyruvate formate-lyase [Source:UniProtKB/TrEMBL%3BAcc:B8LBJ3];external_name=Thaps263830;logic_name=jgi_thaps3 chr11a ensembl transcript 772549 773563 . - . ID=Thaps263830;Parent=Thaps263830;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 772549 772881 . - 0 ID=Thaps263830;Parent=Thaps263830;rank=5 chr11a . exon 772549 772881 . - . ID=Thaps263830.5;Parent=Thaps263830;constitutive=1;rank=5 chr11a . CDS 772973 773086 . - 0 ID=Thaps263830;Parent=Thaps263830;rank=4 chr11a . exon 772973 773086 . - . ID=Thaps263830.4;Parent=Thaps263830;constitutive=1;rank=4 chr11a . CDS 773164 773306 . - 0 ID=Thaps263830;Parent=Thaps263830;rank=3 chr11a . exon 773164 773306 . - . ID=Thaps263830.3;Parent=Thaps263830;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 773382 773417 . - 0 ID=Thaps263830;Parent=Thaps263830;rank=2 chr11a . exon 773382 773417 . - . ID=Thaps263830.2;Parent=Thaps263830;constitutive=1;rank=2 chr11a . CDS 773497 773563 . - 0 ID=Thaps263830;Parent=Thaps263830;rank=1 chr11a . exon 773497 773563 . - . ID=Thaps263830.1;Parent=Thaps263830;constitutive=1;ensembl_end_phase=1;rank=1 chr11a ensembl protein_coding_gene 770790 772030 . + . ID=Thaps36641;biotype=protein_coding;description=Transaldolase [Source:UniProtKB/TrEMBL%3BAcc:B8LBJ2];external_name=Thaps36641;logic_name=jgi_thaps3 chr11a ensembl transcript 770790 772030 . + . ID=Thaps36641;Parent=Thaps36641;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 770790 771189 . + 0 ID=Thaps36641;Parent=Thaps36641;rank=1 chr11a . exon 770790 771189 . + . ID=Thaps36641.1;Parent=Thaps36641;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 771271 771683 . + 0 ID=Thaps36641;Parent=Thaps36641;rank=2 chr11a . exon 771271 771683 . + . ID=Thaps36641.2;Parent=Thaps36641;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 771782 772030 . + 0 ID=Thaps36641;Parent=Thaps36641;rank=3 chr11a . exon 771782 772030 . + . ID=Thaps36641.3;Parent=Thaps36641;constitutive=1;rank=3 chr11a ensembl protein_coding_gene 773723 776141 . - . ID=Thaps36689;biotype=protein_coding;description=Predicted proteinPyruvate formate-lyase [Source:UniProtKB/TrEMBL%3BAcc:B8LBJ4];external_name=Thaps36689;logic_name=jgi_thaps3 chr11a ensembl transcript 773723 776141 . - . ID=Thaps36689;Parent=Thaps36689;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 773723 774959 . - 0 ID=Thaps36689;Parent=Thaps36689;rank=3 chr11a . exon 773723 774959 . - . ID=Thaps36689.3;Parent=Thaps36689;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 775055 775623 . - 0 ID=Thaps36689;Parent=Thaps36689;rank=2 chr11a . exon 775055 775623 . - . ID=Thaps36689.2;Parent=Thaps36689;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 775731 776141 . - 0 ID=Thaps36689;Parent=Thaps36689;rank=1 chr11a . exon 775731 776141 . - . ID=Thaps36689.1;Parent=Thaps36689;constitutive=1;rank=1 chr11a . repeat_region 784069 784090 . ? . description=trf chr11a . repeat_region 784069 784090 . ? . description=dust chr11a . repeat_region 784168 784204 . ? . description=dust chr11a . repeat_region 784168 784208 . ? . description=trf chr11a . repeat_region 784168 784208 . ? . description=trf chr11a . repeat_region 784168 784208 . ? . description=trf chr11a . repeat_region 784238 784293 . ? . description=dust chr11a . repeat_region 784563 784581 . ? . description=dust chr11a ensembl protein_coding_gene 779983 781042 . + . ID=Thaps263834;biotype=protein_coding;description=Predicted proteinPyruvate formate-lyase [Source:UniProtKB/TrEMBL%3BAcc:B8LBJ6];external_name=Thaps263834;logic_name=jgi_thaps3 chr11a ensembl transcript 779983 781042 . + . ID=Thaps263834;Parent=Thaps263834;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 779983 780043 . + 0 ID=Thaps263834;Parent=Thaps263834;rank=1 chr11a . exon 779983 780043 . + . ID=Thaps263834.1;Parent=Thaps263834;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 780117 780152 . + 0 ID=Thaps263834;Parent=Thaps263834;rank=2 chr11a . exon 780117 780152 . + . ID=Thaps263834.2;Parent=Thaps263834;constitutive=1;rank=2 chr11a . CDS 780238 780380 . + 0 ID=Thaps263834;Parent=Thaps263834;rank=3 chr11a . exon 780238 780380 . + . ID=Thaps263834.3;Parent=Thaps263834;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 780459 780578 . + 0 ID=Thaps263834;Parent=Thaps263834;rank=4 chr11a . exon 780459 780578 . + . ID=Thaps263834.4;Parent=Thaps263834;constitutive=1;rank=4 chr11a . CDS 780662 781042 . + 0 ID=Thaps263834;Parent=Thaps263834;rank=5 chr11a . exon 780662 781042 . + . ID=Thaps263834.5;Parent=Thaps263834;constitutive=1;rank=5 chr11a ensembl protein_coding_gene 784217 786569 . + . ID=Thaps269586;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBJ8];external_name=Thaps269586;logic_name=jgi_thaps3 chr11a ensembl transcript 784217 786569 . + . ID=Thaps269586;Parent=Thaps269586;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 784217 786056 . + 0 ID=Thaps269586;Parent=Thaps269586;rank=1 chr11a . exon 784217 786056 . + . ID=Thaps269586.1;Parent=Thaps269586;constitutive=1;ensembl_end_phase=1;rank=1 chr11a . CDS 786154 786569 . + 0 ID=Thaps269586;Parent=Thaps269586;rank=2 chr11a . exon 786154 786569 . + . ID=Thaps269586.2;Parent=Thaps269586;constitutive=1;ensembl_end_phase=2;rank=2 chr11a ensembl protein_coding_gene 777326 779835 . + . ID=Thaps36702;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF70];external_name=Thaps36702;logic_name=jgi_thaps3 chr11a ensembl transcript 777326 779835 . + . ID=Thaps36702;Parent=Thaps36702;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 777326 777736 . + 0 ID=Thaps36702;Parent=Thaps36702;rank=1 chr11a . exon 777326 777736 . + . ID=Thaps36702.1;Parent=Thaps36702;constitutive=1;rank=1 chr11a . CDS 777844 778412 . + 0 ID=Thaps36702;Parent=Thaps36702;rank=2 chr11a . exon 777844 778412 . + . ID=Thaps36702.2;Parent=Thaps36702;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 778508 779128 . + 0 ID=Thaps36702;Parent=Thaps36702;rank=3 chr11a . exon 778508 779128 . + . ID=Thaps36702.3;Parent=Thaps36702;constitutive=1;rank=3 chr11a . CDS 779220 779835 . + 0 ID=Thaps36702;Parent=Thaps36702;rank=4 chr11a . exon 779220 779835 . + . ID=Thaps36702.4;Parent=Thaps36702;constitutive=1;ensembl_end_phase=1;rank=4 chr11a ensembl protein_coding_gene 781235 784069 . - . ID=Thaps8885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF72];external_name=Thaps8885;logic_name=jgi_thaps3 chr11a ensembl transcript 781235 784069 . - . ID=Thaps8885;Parent=Thaps8885;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 781235 782575 . - 0 ID=Thaps8885;Parent=Thaps8885;rank=3 chr11a . exon 781235 782575 . - . ID=Thaps8885.3;Parent=Thaps8885;constitutive=1;rank=3 chr11a . CDS 782657 782999 . - 0 ID=Thaps8885;Parent=Thaps8885;rank=2 chr11a . exon 782657 782999 . - . ID=Thaps8885.2;Parent=Thaps8885;constitutive=1;ensembl_end_phase=1;rank=2 chr11a . CDS 783087 784069 . - 0 ID=Thaps8885;Parent=Thaps8885;rank=1 chr11a . exon 783087 784069 . - . ID=Thaps8885.1;Parent=Thaps8885;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 787263 791351 . - . ID=Thaps24395;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF74];external_name=Thaps24395;logic_name=jgi_thaps3 chr11a ensembl transcript 787263 791351 . - . ID=Thaps24395;Parent=Thaps24395;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 787263 790839 . - 0 ID=Thaps24395;Parent=Thaps24395;rank=3 chr11a . exon 787263 790839 . - . ID=Thaps24395.3;Parent=Thaps24395;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 791020 791088 . - 0 ID=Thaps24395;Parent=Thaps24395;rank=2 chr11a . exon 791020 791088 . - . ID=Thaps24395.2;Parent=Thaps24395;constitutive=1;rank=2 chr11a . CDS 791209 791351 . - 0 ID=Thaps24395;Parent=Thaps24395;rank=1 chr11a . exon 791209 791351 . - . ID=Thaps24395.1;Parent=Thaps24395;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 793071 794458 . - . ID=Thaps24396;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF75];external_name=Thaps24396;logic_name=jgi_thaps3 chr11a ensembl transcript 793071 794458 . - . ID=Thaps24396;Parent=Thaps24396;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 793071 794080 . - 0 ID=Thaps24396;Parent=Thaps24396;rank=3 chr11a . exon 793071 794080 . - . ID=Thaps24396.3;Parent=Thaps24396;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . CDS 794205 794260 . - 0 ID=Thaps24396;Parent=Thaps24396;rank=2 chr11a . exon 794205 794260 . - . ID=Thaps24396.2;Parent=Thaps24396;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 794400 794458 . - 0 ID=Thaps24396;Parent=Thaps24396;rank=1 chr11a . exon 794400 794458 . - . ID=Thaps24396.1;Parent=Thaps24396;constitutive=1;ensembl_end_phase=2;rank=1 chr11a ensembl protein_coding_gene 795840 797108 . + . ID=Thaps36629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF76];external_name=Thaps36629;logic_name=jgi_thaps3 chr11a ensembl transcript 795840 797108 . + . ID=Thaps36629;Parent=Thaps36629;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 795840 796585 . + 0 ID=Thaps36629;Parent=Thaps36629;rank=1 chr11a . exon 795840 796585 . + . ID=Thaps36629.1;Parent=Thaps36629;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 796649 797108 . + 0 ID=Thaps36629;Parent=Thaps36629;rank=2 chr11a . repeat_region 803082 803124 . ? . description=trf chr11a ensembl protein_coding_gene 797355 799311 . + . ID=Thaps263836;biotype=protein_coding;description=Gamma-glutamyltransferasePredicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBK2];external_name=Thaps263836;logic_name=jgi_thaps3 chr11a ensembl transcript 797355 799311 . + . ID=Thaps263836;Parent=Thaps263836;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 797355 797446 . + 0 ID=Thaps263836;Parent=Thaps263836;rank=1 chr11a . exon 797355 797446 . + . ID=Thaps263836.1;Parent=Thaps263836;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 797533 798648 . + 0 ID=Thaps263836;Parent=Thaps263836;rank=2 chr11a . exon 797533 798648 . + . ID=Thaps263836.2;Parent=Thaps263836;constitutive=1;rank=2 chr11a . CDS 798725 798992 . + 0 ID=Thaps263836;Parent=Thaps263836;rank=3 chr11a . exon 798725 798992 . + . ID=Thaps263836.3;Parent=Thaps263836;constitutive=1;ensembl_end_phase=1;rank=3 chr11a . CDS 799075 799311 . + 0 ID=Thaps263836;Parent=Thaps263836;rank=4 chr11a . exon 799075 799311 . + . ID=Thaps263836.4;Parent=Thaps263836;constitutive=1;rank=4 chr11a ensembl protein_coding_gene 801574 803061 . + . ID=Thaps36597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF78];external_name=Thaps36597;logic_name=jgi_thaps3 chr11a ensembl transcript 801574 803061 . + . ID=Thaps36597;Parent=Thaps36597;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 801574 801824 . + 0 ID=Thaps36597;Parent=Thaps36597;rank=1 chr11a . exon 801574 801824 . + . ID=Thaps36597.1;Parent=Thaps36597;constitutive=1;ensembl_end_phase=2;rank=1 chr11a . CDS 801855 802801 . + 0 ID=Thaps36597;Parent=Thaps36597;rank=2 chr11a . exon 801855 802801 . + . ID=Thaps36597.2;Parent=Thaps36597;constitutive=1;ensembl_end_phase=2;rank=2 chr11a . CDS 802841 803061 . + 0 ID=Thaps36597;Parent=Thaps36597;rank=3 chr11a . exon 802841 803061 . + . ID=Thaps36597.3;Parent=Thaps36597;constitutive=1;ensembl_end_phase=2;rank=3 chr11a . exon 796649 797108 . + . ID=Thaps36629.2;Parent=Thaps36629;constitutive=1;ensembl_end_phase=1;rank=2 chr11a ensembl protein_coding_gene 804330 805007 . + . ID=Thaps36650;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF79];external_name=Thaps36650;logic_name=jgi_thaps3 chr11a ensembl transcript 804330 805007 . + . ID=Thaps36650;Parent=Thaps36650;biotype=protein_coding;logic_name=jgi_thaps3 chr11a . CDS 804330 805007 . + 0 ID=Thaps36650;Parent=Thaps36650;rank=1 chr11a . exon 804330 805007 . + . ID=Thaps36650.1;Parent=Thaps36650;constitutive=1;rank=1 ##gff-version 3 ##sequence-region 18 1 827053 chr18 . repeat_region 1 546 . ? . description=trf chr18 . repeat_region 1 546 . ? . description=dust chr18 . repeat_region 700 750 . + . description=Harbinger2N_TP chr18 . repeat_region 701 750 . ? . description=trf chr18 . repeat_region 705 750 . ? . description=dust chr18 . repeat_region 748 845 . - . description=Copia5LTR_TP chr18 . repeat_region 1240 1764 . ? . description=trf chr18 . repeat_region 1240 2215 . ? . description=trf chr18 . repeat_region 1270 1443 . - . description=SAT1_TP chr18 . repeat_region 1444 1617 . - . description=SAT1_TP chr18 . repeat_region 1606 1934 . ? . description=trf chr18 . repeat_region 1618 1779 . - . description=SAT1_TP chr18 . repeat_region 1767 2215 . ? . description=trf chr18 . repeat_region 1780 1953 . - . description=SAT1_TP chr18 . repeat_region 1954 2127 . - . description=SAT1_TP chr18 . repeat_region 2128 2276 . - . description=SAT1_TP chr18 . repeat_region 3504 3844 . ? . description=trf chr18 . repeat_region 5176 5245 . ? . description=trf chr18 . repeat_region 7188 7286 . ? . description=trf chr18 ensembl protein_coding_gene 4321 8012 . - . ID=Thaps25314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLF0];external_name=Thaps25314;logic_name=jgi_thaps3 chr18 ensembl transcript 4321 8012 . - . ID=Thaps25314;Parent=Thaps25314;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 4321 5960 . - 0 ID=Thaps25314;Parent=Thaps25314;rank=2 chr18 . exon 4321 5960 . - . ID=Thaps25314.2;Parent=Thaps25314;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 5981 8012 . - 0 ID=Thaps25314;Parent=Thaps25314;rank=1 chr18 . exon 5981 8012 . - . ID=Thaps25314.1;Parent=Thaps25314;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 1550 2216 . - . ID=Thaps264479;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLE9];external_name=Thaps264479;logic_name=jgi_thaps3 chr18 ensembl transcript 1550 2216 . - . ID=Thaps264479;Parent=Thaps264479;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 1550 1595 . - 0 ID=Thaps264479;Parent=Thaps264479;rank=3 chr18 . exon 1550 1595 . - . ID=Thaps264479.3;Parent=Thaps264479;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 1608 1828 . - 0 ID=Thaps264479;Parent=Thaps264479;rank=2 chr18 . exon 1608 1828 . - . ID=Thaps264479.2;Parent=Thaps264479;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 2177 2216 . - 0 ID=Thaps264479;Parent=Thaps264479;rank=1 chr18 . exon 2177 2216 . - . ID=Thaps264479.1;Parent=Thaps264479;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 14672 17225 . - . ID=Thaps10761;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLF3];external_name=Thaps10761;logic_name=jgi_thaps3 chr18 ensembl transcript 14672 17225 . - . ID=Thaps10761;Parent=Thaps10761;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 14672 15000 . - 0 ID=Thaps10761;Parent=Thaps10761;rank=5 chr18 . exon 14672 15000 . - . ID=Thaps10761.5;Parent=Thaps10761;constitutive=1;ensembl_end_phase=2;rank=5 chr18 . CDS 15412 16098 . - 0 ID=Thaps10761;Parent=Thaps10761;rank=4 chr18 . exon 15412 16098 . - . ID=Thaps10761.4;Parent=Thaps10761;constitutive=1;rank=4 chr18 . CDS 16185 16326 . - 0 ID=Thaps10761;Parent=Thaps10761;rank=3 chr18 . exon 16185 16326 . - . ID=Thaps10761.3;Parent=Thaps10761;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 16404 16461 . - 0 ID=Thaps10761;Parent=Thaps10761;rank=2 chr18 . exon 16404 16461 . - . ID=Thaps10761.2;Parent=Thaps10761;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 16552 17225 . - 0 ID=Thaps10761;Parent=Thaps10761;rank=1 chr18 . exon 16552 17225 . - . ID=Thaps10761.1;Parent=Thaps10761;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 12290 14495 . + . ID=Thaps25315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLF2];external_name=Thaps25315;logic_name=jgi_thaps3 chr18 ensembl transcript 12290 14495 . + . ID=Thaps25315;Parent=Thaps25315;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 12290 12611 . + 0 ID=Thaps25315;Parent=Thaps25315;rank=1 chr18 . exon 12290 12611 . + . ID=Thaps25315.1;Parent=Thaps25315;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 12743 12905 . + 0 ID=Thaps25315;Parent=Thaps25315;rank=2 chr18 . exon 12743 12905 . + . ID=Thaps25315.2;Parent=Thaps25315;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 13181 13283 . + 0 ID=Thaps25315;Parent=Thaps25315;rank=3 chr18 . exon 13181 13283 . + . ID=Thaps25315.3;Parent=Thaps25315;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 13464 14495 . + 0 ID=Thaps25315;Parent=Thaps25315;rank=4 chr18 . exon 13464 14495 . + . ID=Thaps25315.4;Parent=Thaps25315;constitutive=1;rank=4 chr18 ensembl protein_coding_gene 10990 11466 . + . ID=Thaps38187;biotype=protein_coding;description=Metacaspase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLF1];external_name=Thaps38187;logic_name=jgi_thaps3 chr18 ensembl transcript 10990 11466 . + . ID=Thaps38187;Parent=Thaps38187;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 10990 11466 . + 0 ID=Thaps38187;Parent=Thaps38187;rank=1 chr18 . exon 10990 11466 . + . ID=Thaps38187.1;Parent=Thaps38187;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 20443 22015 . - . ID=Thaps10762;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLF4];external_name=Thaps10762;logic_name=jgi_thaps3 chr18 ensembl transcript 20443 22015 . - . ID=Thaps10762;Parent=Thaps10762;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 20443 21138 . - 0 ID=Thaps10762;Parent=Thaps10762;rank=3 chr18 . exon 20443 21138 . - . ID=Thaps10762.3;Parent=Thaps10762;constitutive=1;rank=3 chr18 . CDS 21374 21431 . - 0 ID=Thaps10762;Parent=Thaps10762;rank=2 chr18 . exon 21374 21431 . - . ID=Thaps10762.2;Parent=Thaps10762;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 21588 22015 . - 0 ID=Thaps10762;Parent=Thaps10762;rank=1 chr18 . exon 21588 22015 . - . ID=Thaps10762.1;Parent=Thaps10762;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 25401 26210 . + . ID=Thaps264481;biotype=protein_coding;description=Mannosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B5YLF5];external_name=Thaps264481;logic_name=jgi_thaps3 chr18 ensembl transcript 25401 26210 . + . ID=Thaps264481;Parent=Thaps264481;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 25401 25704 . + 0 ID=Thaps264481;Parent=Thaps264481;rank=1 chr18 . exon 25401 25704 . + . ID=Thaps264481.1;Parent=Thaps264481;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 25765 26210 . + 0 ID=Thaps264481;Parent=Thaps264481;rank=2 chr18 . exon 25765 26210 . + . ID=Thaps264481.2;Parent=Thaps264481;constitutive=1;ensembl_end_phase=2;rank=2 chr18 ensembl protein_coding_gene 26318 28500 . - . ID=Thaps38046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLF6];external_name=Thaps38046;logic_name=jgi_thaps3 chr18 ensembl transcript 26318 28500 . - . ID=Thaps38046;Parent=Thaps38046;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 26318 26577 . - 0 ID=Thaps38046;Parent=Thaps38046;rank=5 chr18 . exon 26318 26577 . - . ID=Thaps38046.5;Parent=Thaps38046;constitutive=1;ensembl_end_phase=2;rank=5 chr18 . CDS 26670 26719 . - 0 ID=Thaps38046;Parent=Thaps38046;rank=4 chr18 . exon 26670 26719 . - . ID=Thaps38046.4;Parent=Thaps38046;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 26809 26967 . - 0 ID=Thaps38046;Parent=Thaps38046;rank=3 chr18 . exon 26809 26967 . - . ID=Thaps38046.3;Parent=Thaps38046;constitutive=1;rank=3 chr18 . CDS 27089 28278 . - 0 ID=Thaps38046;Parent=Thaps38046;rank=2 chr18 . exon 27089 28278 . - . ID=Thaps38046.2;Parent=Thaps38046;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 28366 28500 . - 0 ID=Thaps38046;Parent=Thaps38046;rank=1 chr18 . exon 28366 28500 . - . ID=Thaps38046.1;Parent=Thaps38046;constitutive=1;rank=1 chr18 . repeat_region 33182 33197 . ? . description=dust chr18 . repeat_region 34145 34195 . ? . description=dust chr18 . repeat_region 34733 34740 . ? . description=dust chr18 . repeat_region 38062 38122 . ? . description=dust chr18 ensembl protein_coding_gene 32133 33123 . + . ID=Thaps10766;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLF8];external_name=Thaps10766;logic_name=jgi_thaps3 chr18 ensembl transcript 32133 33123 . + . ID=Thaps10766;Parent=Thaps10766;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 32133 32545 . + 0 ID=Thaps10766;Parent=Thaps10766;rank=1 chr18 . exon 32133 32545 . + . ID=Thaps10766.1;Parent=Thaps10766;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 32631 33123 . + 0 ID=Thaps10766;Parent=Thaps10766;rank=2 chr18 . exon 32631 33123 . + . ID=Thaps10766.2;Parent=Thaps10766;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 33290 35770 . - . ID=Thaps10767;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLF9];external_name=Thaps10767;logic_name=jgi_thaps3 chr18 ensembl transcript 33290 35770 . - . ID=Thaps10767;Parent=Thaps10767;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 33290 34723 . - 0 ID=Thaps10767;Parent=Thaps10767;rank=3 chr18 . exon 33290 34723 . - . ID=Thaps10767.3;Parent=Thaps10767;constitutive=1;rank=3 chr18 . CDS 34836 35431 . - 0 ID=Thaps10767;Parent=Thaps10767;rank=2 chr18 . exon 34836 35431 . - . ID=Thaps10767.2;Parent=Thaps10767;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 35533 35770 . - 0 ID=Thaps10767;Parent=Thaps10767;rank=1 chr18 . exon 35533 35770 . - . ID=Thaps10767.1;Parent=Thaps10767;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 36814 38055 . - . ID=Thaps10768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLG0];external_name=Thaps10768;logic_name=jgi_thaps3 chr18 ensembl transcript 36814 38055 . - . ID=Thaps10768;Parent=Thaps10768;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 36814 38055 . - 0 ID=Thaps10768;Parent=Thaps10768;rank=1 chr18 . exon 36814 38055 . - . ID=Thaps10768.1;Parent=Thaps10768;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 39189 45525 . - . ID=Thaps25318;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLG1];external_name=Thaps25318;logic_name=jgi_thaps3 chr18 ensembl transcript 39189 45525 . - . ID=Thaps25318;Parent=Thaps25318;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 39189 42379 . - 0 ID=Thaps25318;Parent=Thaps25318;rank=5 chr18 . exon 39189 42379 . - . ID=Thaps25318.5;Parent=Thaps25318;constitutive=1;ensembl_end_phase=2;rank=5 chr18 . CDS 42586 42836 . - 0 ID=Thaps25318;Parent=Thaps25318;rank=4 chr18 . CDS 43271 44392 . - 0 ID=Thaps25318;Parent=Thaps25318;rank=3 chr18 . CDS 44482 44627 . - 0 ID=Thaps25318;Parent=Thaps25318;rank=2 chr18 . CDS 44701 45525 . - 0 ID=Thaps25318;Parent=Thaps25318;rank=1 chr18 ensembl protein_coding_gene 30069 30592 . + . ID=Thaps269927;biotype=protein_coding;description=GAF domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLF7];external_name=Thaps269927;logic_name=jgi_thaps3 chr18 ensembl transcript 30069 30592 . + . ID=Thaps269927;Parent=Thaps269927;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 30069 30075 . + 0 ID=Thaps269927;Parent=Thaps269927;rank=1 chr18 . exon 30069 30075 . + . ID=Thaps269927.1;Parent=Thaps269927;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 30180 30202 . + 0 ID=Thaps269927;Parent=Thaps269927;rank=2 chr18 . exon 30180 30202 . + . ID=Thaps269927.2;Parent=Thaps269927;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 30293 30592 . + 0 ID=Thaps269927;Parent=Thaps269927;rank=3 chr18 . exon 30293 30592 . + . ID=Thaps269927.3;Parent=Thaps269927;constitutive=1;rank=3 chr18 . repeat_region 42113 42147 . ? . description=trf chr18 . repeat_region 46658 48300 . - . description=Harbinger4_TP chr18 . repeat_region 47108 47130 . ? . description=trf chr18 . repeat_region 49730 49764 . ? . description=trf chr18 . exon 42586 42836 . - . ID=Thaps25318.4;Parent=Thaps25318;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . exon 43271 44392 . - . ID=Thaps25318.3;Parent=Thaps25318;constitutive=1;rank=3 chr18 . exon 44482 44627 . - . ID=Thaps25318.2;Parent=Thaps25318;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . exon 44701 45525 . - . ID=Thaps25318.1;Parent=Thaps25318;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 48757 51565 . + . ID=Thaps25319;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLG2];external_name=Thaps25319;logic_name=jgi_thaps3 chr18 ensembl transcript 48757 51565 . + . ID=Thaps25319;Parent=Thaps25319;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 48757 50319 . + 0 ID=Thaps25319;Parent=Thaps25319;rank=1 chr18 . exon 48757 50319 . + . ID=Thaps25319.1;Parent=Thaps25319;constitutive=1;rank=1 chr18 . CDS 50446 51016 . + 0 ID=Thaps25319;Parent=Thaps25319;rank=2 chr18 . CDS 51135 51565 . + 0 ID=Thaps25319;Parent=Thaps25319;rank=3 chr18 . repeat_region 58519 58543 . ? . description=dust chr18 . repeat_region 59150 59192 . ? . description=dust chr18 ensembl protein_coding_gene 55364 56416 . + . ID=Thaps10772;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLG4];external_name=Thaps10772;logic_name=jgi_thaps3 chr18 ensembl transcript 55364 56416 . + . ID=Thaps10772;Parent=Thaps10772;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 55364 56416 . + 0 ID=Thaps10772;Parent=Thaps10772;rank=1 chr18 . exon 55364 56416 . + . ID=Thaps10772.1;Parent=Thaps10772;constitutive=1;rank=1 chr18 . exon 50446 51016 . + . ID=Thaps25319.2;Parent=Thaps25319;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . exon 51135 51565 . + . ID=Thaps25319.3;Parent=Thaps25319;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 56999 58519 . - . ID=Thaps25320;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLG5];external_name=Thaps25320;logic_name=jgi_thaps3 chr18 ensembl transcript 56999 58519 . - . ID=Thaps25320;Parent=Thaps25320;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 56999 57098 . - 0 ID=Thaps25320;Parent=Thaps25320;rank=2 chr18 . exon 56999 57098 . - . ID=Thaps25320.2;Parent=Thaps25320;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 57216 58519 . - 0 ID=Thaps25320;Parent=Thaps25320;rank=1 chr18 . exon 57216 58519 . - . ID=Thaps25320.1;Parent=Thaps25320;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 53073 54596 . + . ID=Thaps38189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLG3];external_name=Thaps38189;logic_name=jgi_thaps3 chr18 ensembl transcript 53073 54596 . + . ID=Thaps38189;Parent=Thaps38189;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 53073 54596 . + 0 ID=Thaps38189;Parent=Thaps38189;rank=1 chr18 . exon 53073 54596 . + . ID=Thaps38189.1;Parent=Thaps38189;constitutive=1;rank=1 chr18 . repeat_region 66141 66891 . - . description=TE2c_TP chr18 . repeat_region 66487 66515 . ? . description=trf chr18 ensembl protein_coding_gene 60279 61586 . - . ID=Thaps10774;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLG6];external_name=Thaps10774;logic_name=jgi_thaps3 chr18 ensembl transcript 60279 61586 . - . ID=Thaps10774;Parent=Thaps10774;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 60279 61327 . - 0 ID=Thaps10774;Parent=Thaps10774;rank=2 chr18 . exon 60279 61327 . - . ID=Thaps10774.2;Parent=Thaps10774;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 61391 61586 . - 0 ID=Thaps10774;Parent=Thaps10774;rank=1 chr18 . exon 61391 61586 . - . ID=Thaps10774.1;Parent=Thaps10774;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 67180 68570 . - . ID=Thaps10777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLG9];external_name=Thaps10777;logic_name=jgi_thaps3 chr18 ensembl transcript 67180 68570 . - . ID=Thaps10777;Parent=Thaps10777;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 67180 67742 . - 0 ID=Thaps10777;Parent=Thaps10777;rank=4 chr18 . exon 67180 67742 . - . ID=Thaps10777.4;Parent=Thaps10777;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 67871 67956 . - 0 ID=Thaps10777;Parent=Thaps10777;rank=3 chr18 . exon 67871 67956 . - . ID=Thaps10777.3;Parent=Thaps10777;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 68028 68161 . - 0 ID=Thaps10777;Parent=Thaps10777;rank=2 chr18 . exon 68028 68161 . - . ID=Thaps10777.2;Parent=Thaps10777;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 68217 68570 . - 0 ID=Thaps10777;Parent=Thaps10777;rank=1 chr18 . exon 68217 68570 . - . ID=Thaps10777.1;Parent=Thaps10777;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 69100 71027 . + . ID=Thaps10778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH0];external_name=Thaps10778;logic_name=jgi_thaps3 chr18 ensembl transcript 69100 71027 . + . ID=Thaps10778;Parent=Thaps10778;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 69100 69167 . + 0 ID=Thaps10778;Parent=Thaps10778;rank=1 chr18 . exon 69100 69167 . + . ID=Thaps10778.1;Parent=Thaps10778;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 69227 69303 . + 0 ID=Thaps10778;Parent=Thaps10778;rank=2 chr18 . exon 69227 69303 . + . ID=Thaps10778.2;Parent=Thaps10778;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 69388 71027 . + 0 ID=Thaps10778;Parent=Thaps10778;rank=3 chr18 . exon 69388 71027 . + . ID=Thaps10778.3;Parent=Thaps10778;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 61935 64206 . + . ID=Thaps25321;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLG7];external_name=Thaps25321;logic_name=jgi_thaps3 chr18 ensembl transcript 61935 64206 . + . ID=Thaps25321;Parent=Thaps25321;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 61935 62594 . + 0 ID=Thaps25321;Parent=Thaps25321;rank=1 chr18 . exon 61935 62594 . + . ID=Thaps25321.1;Parent=Thaps25321;constitutive=1;rank=1 chr18 . CDS 62635 64206 . + 0 ID=Thaps25321;Parent=Thaps25321;rank=2 chr18 . exon 62635 64206 . + . ID=Thaps25321.2;Parent=Thaps25321;constitutive=1;rank=2 chr18 ensembl protein_coding_gene 64693 65434 . - . ID=Thaps797;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B5YLG8];external_name=Thaps797;logic_name=jgi_thaps3 chr18 ensembl transcript 64693 65434 . - . ID=Thaps797;Parent=Thaps797;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 64693 65030 . - 0 ID=Thaps797;Parent=Thaps797;rank=3 chr18 . exon 64693 65030 . - . ID=Thaps797.3;Parent=Thaps797;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 65149 65198 . - 0 ID=Thaps797;Parent=Thaps797;rank=2 chr18 . exon 65149 65198 . - . ID=Thaps797.2;Parent=Thaps797;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 65313 65434 . - 0 ID=Thaps797;Parent=Thaps797;rank=1 chr18 . exon 65313 65434 . - . ID=Thaps797.1;Parent=Thaps797;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 79178 82594 . - . ID=Thaps10781;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH3];external_name=Thaps10781;logic_name=jgi_thaps3 chr18 ensembl transcript 79178 82594 . - . ID=Thaps10781;Parent=Thaps10781;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 79178 79189 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=14 chr18 . exon 79178 79189 . - . ID=Thaps10781.14;Parent=Thaps10781;constitutive=1;rank=14 chr18 . CDS 79265 79324 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=13 chr18 . exon 79265 79324 . - . ID=Thaps10781.13;Parent=Thaps10781;constitutive=1;rank=13 chr18 . CDS 79418 79663 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=12 chr18 . exon 79418 79663 . - . ID=Thaps10781.12;Parent=Thaps10781;constitutive=1;rank=12 chr18 . CDS 79782 79841 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=11 chr18 . CDS 79935 80042 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=10 chr18 . CDS 80125 80184 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=9 chr18 . CDS 80303 80362 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=8 chr18 . CDS 80456 80563 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=7 chr18 . CDS 80661 80875 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=6 chr18 . CDS 80988 81094 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=5 chr18 . CDS 81237 81367 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=4 chr18 . CDS 81457 81529 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=3 chr18 . CDS 81630 82024 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=2 chr18 . CDS 82130 82594 . - 0 ID=Thaps10781;Parent=Thaps10781;rank=1 chr18 ensembl protein_coding_gene 71830 73731 . - . ID=Thaps25322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH1];external_name=Thaps25322;logic_name=jgi_thaps3 chr18 ensembl transcript 71830 73731 . - . ID=Thaps25322;Parent=Thaps25322;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 71830 73731 . - 0 ID=Thaps25322;Parent=Thaps25322;rank=1 chr18 . exon 71830 73731 . - . ID=Thaps25322.1;Parent=Thaps25322;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 74177 77381 . + . ID=Thaps25323;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH2];external_name=Thaps25323;logic_name=jgi_thaps3 chr18 ensembl transcript 74177 77381 . + . ID=Thaps25323;Parent=Thaps25323;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 74177 74954 . + 0 ID=Thaps25323;Parent=Thaps25323;rank=1 chr18 . exon 74177 74954 . + . ID=Thaps25323.1;Parent=Thaps25323;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 75295 75462 . + 0 ID=Thaps25323;Parent=Thaps25323;rank=2 chr18 . exon 75295 75462 . + . ID=Thaps25323.2;Parent=Thaps25323;constitutive=1;rank=2 chr18 . CDS 75525 75757 . + 0 ID=Thaps25323;Parent=Thaps25323;rank=3 chr18 . exon 75525 75757 . + . ID=Thaps25323.3;Parent=Thaps25323;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 75896 75942 . + 0 ID=Thaps25323;Parent=Thaps25323;rank=4 chr18 . exon 75896 75942 . + . ID=Thaps25323.4;Parent=Thaps25323;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 76058 77381 . + 0 ID=Thaps25323;Parent=Thaps25323;rank=5 chr18 . exon 76058 77381 . + . ID=Thaps25323.5;Parent=Thaps25323;constitutive=1;ensembl_end_phase=1;rank=5 chr18 . repeat_region 82749 83226 . ? . description=trf chr18 . repeat_region 83567 83590 . ? . description=trf chr18 . repeat_region 83567 83590 . ? . description=dust chr18 . repeat_region 87735 87743 . ? . description=dust chr18 . repeat_region 89208 89253 . ? . description=trf chr18 . repeat_region 89208 89253 . ? . description=dust chr18 . exon 79782 79841 . - . ID=Thaps10781.11;Parent=Thaps10781;constitutive=1;rank=11 chr18 . exon 79935 80042 . - . ID=Thaps10781.10;Parent=Thaps10781;constitutive=1;rank=10 chr18 . exon 80125 80184 . - . ID=Thaps10781.9;Parent=Thaps10781;constitutive=1;rank=9 chr18 . exon 80303 80362 . - . ID=Thaps10781.8;Parent=Thaps10781;constitutive=1;rank=8 chr18 . exon 80456 80563 . - . ID=Thaps10781.7;Parent=Thaps10781;constitutive=1;rank=7 chr18 . exon 80661 80875 . - . ID=Thaps10781.6;Parent=Thaps10781;constitutive=1;ensembl_end_phase=2;rank=6 chr18 . exon 80988 81094 . - . ID=Thaps10781.5;Parent=Thaps10781;constitutive=1;ensembl_end_phase=2;rank=5 chr18 . exon 81237 81367 . - . ID=Thaps10781.4;Parent=Thaps10781;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . exon 81457 81529 . - . ID=Thaps10781.3;Parent=Thaps10781;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . exon 81630 82024 . - . ID=Thaps10781.2;Parent=Thaps10781;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . exon 82130 82594 . - . ID=Thaps10781.1;Parent=Thaps10781;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 85428 90207 . - . ID=Thaps25324;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH4];external_name=Thaps25324;logic_name=jgi_thaps3 chr18 ensembl transcript 85428 90207 . - . ID=Thaps25324;Parent=Thaps25324;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 85428 87502 . - 0 ID=Thaps25324;Parent=Thaps25324;rank=6 chr18 . exon 85428 87502 . - . ID=Thaps25324.6;Parent=Thaps25324;constitutive=1;ensembl_end_phase=2;rank=6 chr18 . CDS 87582 87689 . - 0 ID=Thaps25324;Parent=Thaps25324;rank=5 chr18 . exon 87582 87689 . - . ID=Thaps25324.5;Parent=Thaps25324;constitutive=1;rank=5 chr18 . CDS 87773 88136 . - 0 ID=Thaps25324;Parent=Thaps25324;rank=4 chr18 . exon 87773 88136 . - . ID=Thaps25324.4;Parent=Thaps25324;constitutive=1;ensembl_end_phase=1;rank=4 chr18 . CDS 88221 88268 . - 0 ID=Thaps25324;Parent=Thaps25324;rank=3 chr18 . exon 88221 88268 . - . ID=Thaps25324.3;Parent=Thaps25324;constitutive=1;rank=3 chr18 . CDS 88356 89969 . - 0 ID=Thaps25324;Parent=Thaps25324;rank=2 chr18 . exon 88356 89969 . - . ID=Thaps25324.2;Parent=Thaps25324;constitutive=1;rank=2 chr18 . CDS 90070 90207 . - 0 ID=Thaps25324;Parent=Thaps25324;rank=1 chr18 . exon 90070 90207 . - . ID=Thaps25324.1;Parent=Thaps25324;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 91503 93145 . - . ID=Thaps264486;biotype=protein_coding;description=Integrin domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH5];external_name=Thaps264486;logic_name=jgi_thaps3 chr18 ensembl transcript 91503 93145 . - . ID=Thaps264486;Parent=Thaps264486;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 91503 92209 . - 0 ID=Thaps264486;Parent=Thaps264486;rank=2 chr18 . exon 91503 92209 . - . ID=Thaps264486.2;Parent=Thaps264486;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 92792 93145 . - 0 ID=Thaps264486;Parent=Thaps264486;rank=1 chr18 . exon 92792 93145 . - . ID=Thaps264486.1;Parent=Thaps264486;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 99370 99711 . + . ID=Thaps38180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH6];external_name=Thaps38180;logic_name=jgi_thaps3 chr18 ensembl transcript 99370 99711 . + . ID=Thaps38180;Parent=Thaps38180;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 99370 99711 . + 0 ID=Thaps38180;Parent=Thaps38180;rank=1 chr18 . exon 99370 99711 . + . ID=Thaps38180.1;Parent=Thaps38180;constitutive=1;rank=1 chr18 . repeat_region 99702 99751 . ? . description=dust chr18 . repeat_region 101899 101926 . ? . description=trf chr18 . repeat_region 102406 102438 . ? . description=trf chr18 . repeat_region 102406 102438 . ? . description=dust chr18 ensembl protein_coding_gene 106744 108281 . + . ID=Thaps10786;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH8];external_name=Thaps10786;logic_name=jgi_thaps3 chr18 ensembl transcript 106744 108281 . + . ID=Thaps10786;Parent=Thaps10786;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 106744 106910 . + 0 ID=Thaps10786;Parent=Thaps10786;rank=1 chr18 . exon 106744 106910 . + . ID=Thaps10786.1;Parent=Thaps10786;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 107168 108281 . + 0 ID=Thaps10786;Parent=Thaps10786;rank=2 chr18 . exon 107168 108281 . + . ID=Thaps10786.2;Parent=Thaps10786;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 108355 110054 . - . ID=Thaps10787;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH9];external_name=Thaps10787;logic_name=jgi_thaps3 chr18 ensembl transcript 108355 110054 . - . ID=Thaps10787;Parent=Thaps10787;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 108355 108681 . - 0 ID=Thaps10787;Parent=Thaps10787;rank=5 chr18 . exon 108355 108681 . - . ID=Thaps10787.5;Parent=Thaps10787;constitutive=1;rank=5 chr18 . CDS 108769 109026 . - 0 ID=Thaps10787;Parent=Thaps10787;rank=4 chr18 . exon 108769 109026 . - . ID=Thaps10787.4;Parent=Thaps10787;constitutive=1;rank=4 chr18 . CDS 109112 109264 . - 0 ID=Thaps10787;Parent=Thaps10787;rank=3 chr18 . exon 109112 109264 . - . ID=Thaps10787.3;Parent=Thaps10787;constitutive=1;rank=3 chr18 . CDS 109366 109669 . - 0 ID=Thaps10787;Parent=Thaps10787;rank=2 chr18 . exon 109366 109669 . - . ID=Thaps10787.2;Parent=Thaps10787;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 109741 110054 . - 0 ID=Thaps10787;Parent=Thaps10787;rank=1 chr18 ensembl protein_coding_gene 104796 106613 . + . ID=Thaps25325;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLH7];external_name=Thaps25325;logic_name=jgi_thaps3 chr18 ensembl transcript 104796 106613 . + . ID=Thaps25325;Parent=Thaps25325;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 104796 105460 . + 0 ID=Thaps25325;Parent=Thaps25325;rank=1 chr18 . exon 104796 105460 . + . ID=Thaps25325.1;Parent=Thaps25325;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 105554 106613 . + 0 ID=Thaps25325;Parent=Thaps25325;rank=2 chr18 . exon 105554 106613 . + . ID=Thaps25325.2;Parent=Thaps25325;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . exon 109741 110054 . - . ID=Thaps10787.1;Parent=Thaps10787;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 111879 113384 . + . ID=Thaps10788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLI0];external_name=Thaps10788;logic_name=jgi_thaps3 chr18 ensembl transcript 111879 113384 . + . ID=Thaps10788;Parent=Thaps10788;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 111879 113384 . + 0 ID=Thaps10788;Parent=Thaps10788;rank=1 chr18 . exon 111879 113384 . + . ID=Thaps10788.1;Parent=Thaps10788;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 116487 119074 . - . ID=Thaps38121;biotype=protein_coding;description=Member of the clp superfamily%2C large regulatory subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YLI2];external_name=CLPA;logic_name=jgi_thaps3 chr18 ensembl transcript 116487 119074 . - . ID=Thaps38121;Parent=Thaps38121;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 116487 116982 . - 0 ID=Thaps38121;Parent=Thaps38121;rank=5 chr18 . exon 116487 116982 . - . ID=Thaps38121.5;Parent=Thaps38121;constitutive=1;ensembl_end_phase=1;rank=5 chr18 . CDS 117081 117314 . - 0 ID=Thaps38121;Parent=Thaps38121;rank=4 chr18 . exon 117081 117314 . - . ID=Thaps38121.4;Parent=Thaps38121;constitutive=1;rank=4 chr18 . CDS 117412 118154 . - 0 ID=Thaps38121;Parent=Thaps38121;rank=3 chr18 . exon 117412 118154 . - . ID=Thaps38121.3;Parent=Thaps38121;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 118234 118663 . - 0 ID=Thaps38121;Parent=Thaps38121;rank=2 chr18 . exon 118234 118663 . - . ID=Thaps38121.2;Parent=Thaps38121;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 118884 119074 . - 0 ID=Thaps38121;Parent=Thaps38121;rank=1 chr18 . exon 118884 119074 . - . ID=Thaps38121.1;Parent=Thaps38121;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 114527 114970 . + . ID=Thaps38132;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLI1];external_name=Thaps38132;logic_name=jgi_thaps3 chr18 ensembl transcript 114527 114970 . + . ID=Thaps38132;Parent=Thaps38132;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 114527 114970 . + 0 ID=Thaps38132;Parent=Thaps38132;rank=1 chr18 . exon 114527 114970 . + . ID=Thaps38132.1;Parent=Thaps38132;constitutive=1;rank=1 chr18 . repeat_region 120490 120511 . ? . description=trf chr18 . repeat_region 124534 124552 . ? . description=dust chr18 . repeat_region 126966 126986 . ? . description=trf chr18 . repeat_region 126966 126986 . ? . description=dust chr18 ensembl protein_coding_gene 120284 122253 . + . ID=Thaps10791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLI3];external_name=Thaps10791;logic_name=jgi_thaps3 chr18 ensembl transcript 120284 122253 . + . ID=Thaps10791;Parent=Thaps10791;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 120284 120312 . + 0 ID=Thaps10791;Parent=Thaps10791;rank=1 chr18 . exon 120284 120312 . + . ID=Thaps10791.1;Parent=Thaps10791;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 120349 120553 . + 0 ID=Thaps10791;Parent=Thaps10791;rank=2 chr18 . exon 120349 120553 . + . ID=Thaps10791.2;Parent=Thaps10791;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 120685 121855 . + 0 ID=Thaps10791;Parent=Thaps10791;rank=3 chr18 . exon 120685 121855 . + . ID=Thaps10791.3;Parent=Thaps10791;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 121982 122253 . + 0 ID=Thaps10791;Parent=Thaps10791;rank=4 chr18 . exon 121982 122253 . + . ID=Thaps10791.4;Parent=Thaps10791;constitutive=1;ensembl_end_phase=2;rank=4 chr18 ensembl protein_coding_gene 125950 126854 . - . ID=Thaps38171;biotype=protein_coding;description=Uracil-DNA glycosylase [Source:UniProtKB/TrEMBL%3BAcc:B5YLI5];external_name=Thaps38171;logic_name=jgi_thaps3 chr18 ensembl transcript 125950 126854 . - . ID=Thaps38171;Parent=Thaps38171;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 125950 126194 . - 0 ID=Thaps38171;Parent=Thaps38171;rank=3 chr18 . exon 125950 126194 . - . ID=Thaps38171.3;Parent=Thaps38171;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 126255 126572 . - 0 ID=Thaps38171;Parent=Thaps38171;rank=2 chr18 . exon 126255 126572 . - . ID=Thaps38171.2;Parent=Thaps38171;constitutive=1;rank=2 chr18 . CDS 126782 126854 . - 0 ID=Thaps38171;Parent=Thaps38171;rank=1 chr18 . exon 126782 126854 . - . ID=Thaps38171.1;Parent=Thaps38171;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 124009 125422 . - . ID=Thaps42719;biotype=protein_coding;description=Argininosuccinate synthase [Source:UniProtKB/TrEMBL%3BAcc:B5YLI4];external_name=ASSY;logic_name=jgi_thaps3 chr18 ensembl transcript 124009 125422 . - . ID=Thaps42719;Parent=Thaps42719;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 124009 124530 . - 0 ID=Thaps42719;Parent=Thaps42719;rank=2 chr18 . exon 124009 124530 . - . ID=Thaps42719.2;Parent=Thaps42719;constitutive=1;rank=2 chr18 . CDS 124688 125422 . - 0 ID=Thaps42719;Parent=Thaps42719;rank=1 chr18 . exon 124688 125422 . - . ID=Thaps42719.1;Parent=Thaps42719;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 128342 129959 . + . ID=Thaps799;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B5YLI6];external_name=Thaps799;logic_name=jgi_thaps3 chr18 ensembl transcript 128342 129959 . + . ID=Thaps799;Parent=Thaps799;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 128342 128861 . + 0 ID=Thaps799;Parent=Thaps799;rank=1 chr18 . exon 128342 128861 . + . ID=Thaps799.1;Parent=Thaps799;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 128892 129594 . + 0 ID=Thaps799;Parent=Thaps799;rank=2 chr18 . exon 128892 129594 . + . ID=Thaps799.2;Parent=Thaps799;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 129674 129959 . + 0 ID=Thaps799;Parent=Thaps799;rank=3 chr18 . biological_region 133862 133866 0.999 + . logic_name=eponine chr18 . biological_region 133873 133875 0.999 + . logic_name=eponine chr18 . biological_region 133927 133929 0.999 - . logic_name=eponine chr18 ensembl protein_coding_gene 130064 131280 . - . ID=Thaps10795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLI7];external_name=Thaps10795;logic_name=jgi_thaps3 chr18 ensembl transcript 130064 131280 . - . ID=Thaps10795;Parent=Thaps10795;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 130064 130720 . - 0 ID=Thaps10795;Parent=Thaps10795;rank=2 chr18 . exon 130064 130720 . - . ID=Thaps10795.2;Parent=Thaps10795;constitutive=1;rank=2 chr18 . CDS 130848 131280 . - 0 ID=Thaps10795;Parent=Thaps10795;rank=1 chr18 . exon 130848 131280 . - . ID=Thaps10795.1;Parent=Thaps10795;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 132877 133521 . - . ID=Thaps10796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLI8];external_name=Thaps10796;logic_name=jgi_thaps3 chr18 ensembl transcript 132877 133521 . - . ID=Thaps10796;Parent=Thaps10796;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 132877 133521 . - 0 ID=Thaps10796;Parent=Thaps10796;rank=1 chr18 . exon 132877 133521 . - . ID=Thaps10796.1;Parent=Thaps10796;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 137600 140143 . - . ID=Thaps25330;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ0];external_name=Thaps25330;logic_name=jgi_thaps3 chr18 ensembl transcript 137600 140143 . - . ID=Thaps25330;Parent=Thaps25330;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 137600 138232 . - 0 ID=Thaps25330;Parent=Thaps25330;rank=7 chr18 . exon 137600 138232 . - . ID=Thaps25330.7;Parent=Thaps25330;constitutive=1;rank=7 chr18 . CDS 138319 138378 . - 0 ID=Thaps25330;Parent=Thaps25330;rank=6 chr18 . exon 138319 138378 . - . ID=Thaps25330.6;Parent=Thaps25330;constitutive=1;rank=6 chr18 . CDS 138465 138879 . - 0 ID=Thaps25330;Parent=Thaps25330;rank=5 chr18 . exon 138465 138879 . - . ID=Thaps25330.5;Parent=Thaps25330;constitutive=1;ensembl_end_phase=1;rank=5 chr18 . CDS 138976 139580 . - 0 ID=Thaps25330;Parent=Thaps25330;rank=4 chr18 . exon 138976 139580 . - . ID=Thaps25330.4;Parent=Thaps25330;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 139780 139824 . - 0 ID=Thaps25330;Parent=Thaps25330;rank=3 chr18 . CDS 139871 139953 . - 0 ID=Thaps25330;Parent=Thaps25330;rank=2 chr18 . CDS 140062 140143 . - 0 ID=Thaps25330;Parent=Thaps25330;rank=1 chr18 ensembl protein_coding_gene 134857 136273 . - . ID=Thaps38129;biotype=protein_coding;description=26S proteasome regulatory subunit rpn5 [Source:UniProtKB/TrEMBL%3BAcc:B5YLI9];external_name=RPN5;logic_name=jgi_thaps3 chr18 ensembl transcript 134857 136273 . - . ID=Thaps38129;Parent=Thaps38129;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 134857 135633 . - 0 ID=Thaps38129;Parent=Thaps38129;rank=2 chr18 . exon 134857 135633 . - . ID=Thaps38129.2;Parent=Thaps38129;constitutive=1;rank=2 chr18 . CDS 135749 136273 . - 0 ID=Thaps38129;Parent=Thaps38129;rank=1 chr18 . exon 135749 136273 . - . ID=Thaps38129.1;Parent=Thaps38129;constitutive=1;rank=1 chr18 . exon 129674 129959 . + . ID=Thaps799.3;Parent=Thaps799;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . repeat_region 141744 141758 . ? . description=dust chr18 . repeat_region 144502 144510 . ? . description=dust chr18 . repeat_region 144987 144994 . ? . description=dust chr18 . repeat_region 146509 146533 . ? . description=trf chr18 . repeat_region 146509 146533 . ? . description=dust chr18 . repeat_region 147826 147907 . ? . description=trf chr18 . repeat_region 148521 148539 . ? . description=dust chr18 ensembl protein_coding_gene 145787 148326 . - . ID=Thaps10800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ2];external_name=Thaps10800;logic_name=jgi_thaps3 chr18 ensembl transcript 145787 148326 . - . ID=Thaps10800;Parent=Thaps10800;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 145787 146422 . - 0 ID=Thaps10800;Parent=Thaps10800;rank=3 chr18 . exon 145787 146422 . - . ID=Thaps10800.3;Parent=Thaps10800;constitutive=1;rank=3 chr18 . CDS 146591 146902 . - 0 ID=Thaps10800;Parent=Thaps10800;rank=2 chr18 . exon 146591 146902 . - . ID=Thaps10800.2;Parent=Thaps10800;constitutive=1;rank=2 chr18 . CDS 147169 148326 . - 0 ID=Thaps10800;Parent=Thaps10800;rank=1 chr18 . exon 147169 148326 . - . ID=Thaps10800.1;Parent=Thaps10800;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 149442 151473 . - . ID=Thaps10801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ3];external_name=Thaps10801;logic_name=jgi_thaps3 chr18 ensembl transcript 149442 151473 . - . ID=Thaps10801;Parent=Thaps10801;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 149442 150229 . - 0 ID=Thaps10801;Parent=Thaps10801;rank=2 chr18 . exon 149442 150229 . - . ID=Thaps10801.2;Parent=Thaps10801;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 150321 151473 . - 0 ID=Thaps10801;Parent=Thaps10801;rank=1 chr18 . exon 139780 139824 . - . ID=Thaps25330.3;Parent=Thaps25330;constitutive=1;rank=3 chr18 . exon 139871 139953 . - . ID=Thaps25330.2;Parent=Thaps25330;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . exon 140062 140143 . - . ID=Thaps25330.1;Parent=Thaps25330;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 143106 145485 . - . ID=Thaps25331;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ1];external_name=Thaps25331;logic_name=jgi_thaps3 chr18 ensembl transcript 143106 145485 . - . ID=Thaps25331;Parent=Thaps25331;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 143106 143375 . - 0 ID=Thaps25331;Parent=Thaps25331;rank=4 chr18 . exon 143106 143375 . - . ID=Thaps25331.4;Parent=Thaps25331;constitutive=1;rank=4 chr18 . CDS 143470 143517 . - 0 ID=Thaps25331;Parent=Thaps25331;rank=3 chr18 . exon 143470 143517 . - . ID=Thaps25331.3;Parent=Thaps25331;constitutive=1;rank=3 chr18 . CDS 143598 144449 . - 0 ID=Thaps25331;Parent=Thaps25331;rank=2 chr18 . exon 143598 144449 . - . ID=Thaps25331.2;Parent=Thaps25331;constitutive=1;rank=2 chr18 . CDS 144589 145485 . - 0 ID=Thaps25331;Parent=Thaps25331;rank=1 chr18 . exon 144589 145485 . - . ID=Thaps25331.1;Parent=Thaps25331;constitutive=1;rank=1 chr18 . repeat_region 158035 160026 . - . description=MuDR1_TP chr18 . exon 150321 151473 . - . ID=Thaps10801.1;Parent=Thaps10801;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 153409 156217 . + . ID=Thaps10802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ4];external_name=Thaps10802;logic_name=jgi_thaps3 chr18 ensembl transcript 153409 156217 . + . ID=Thaps10802;Parent=Thaps10802;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 153409 153524 . + 0 ID=Thaps10802;Parent=Thaps10802;rank=1 chr18 . exon 153409 153524 . + . ID=Thaps10802.1;Parent=Thaps10802;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 153598 156217 . + 0 ID=Thaps10802;Parent=Thaps10802;rank=2 chr18 . exon 153598 156217 . + . ID=Thaps10802.2;Parent=Thaps10802;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . repeat_region 160412 160435 . ? . description=dust chr18 . repeat_region 164042 164167 . ? . description=dust chr18 . repeat_region 164064 164179 . ? . description=trf chr18 . repeat_region 164848 164870 . ? . description=trf chr18 . repeat_region 164848 164870 . ? . description=dust chr18 . repeat_region 168745 168845 . ? . description=trf chr18 . repeat_region 168745 168845 . ? . description=dust chr18 ensembl protein_coding_gene 160714 162362 . + . ID=Thaps10803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ5];external_name=Thaps10803;logic_name=jgi_thaps3 chr18 ensembl transcript 160714 162362 . + . ID=Thaps10803;Parent=Thaps10803;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 160714 161258 . + 0 ID=Thaps10803;Parent=Thaps10803;rank=1 chr18 . exon 160714 161258 . + . ID=Thaps10803.1;Parent=Thaps10803;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 161342 161976 . + 0 ID=Thaps10803;Parent=Thaps10803;rank=2 chr18 . exon 161342 161976 . + . ID=Thaps10803.2;Parent=Thaps10803;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 162061 162362 . + 0 ID=Thaps10803;Parent=Thaps10803;rank=3 chr18 . exon 162061 162362 . + . ID=Thaps10803.3;Parent=Thaps10803;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 165957 166880 . + . ID=Thaps10805;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ7];external_name=Thaps10805;logic_name=jgi_thaps3 chr18 ensembl transcript 165957 166880 . + . ID=Thaps10805;Parent=Thaps10805;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 165957 166037 . + 0 ID=Thaps10805;Parent=Thaps10805;rank=1 chr18 . exon 165957 166037 . + . ID=Thaps10805.1;Parent=Thaps10805;constitutive=1;rank=1 chr18 . CDS 166146 166880 . + 0 ID=Thaps10805;Parent=Thaps10805;rank=2 chr18 . exon 166146 166880 . + . ID=Thaps10805.2;Parent=Thaps10805;constitutive=1;rank=2 chr18 ensembl protein_coding_gene 168005 169202 . - . ID=Thaps10806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ8];external_name=Thaps10806;logic_name=jgi_thaps3 chr18 ensembl transcript 168005 169202 . - . ID=Thaps10806;Parent=Thaps10806;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 168005 168737 . - 0 ID=Thaps10806;Parent=Thaps10806;rank=2 chr18 . exon 168005 168737 . - . ID=Thaps10806.2;Parent=Thaps10806;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 168952 169202 . - 0 ID=Thaps10806;Parent=Thaps10806;rank=1 chr18 . exon 168952 169202 . - . ID=Thaps10806.1;Parent=Thaps10806;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 162593 164933 . - . ID=Thaps25332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ6];external_name=Thaps25332;logic_name=jgi_thaps3 chr18 ensembl transcript 162593 164933 . - . ID=Thaps25332;Parent=Thaps25332;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 162593 163733 . - 0 ID=Thaps25332;Parent=Thaps25332;rank=2 chr18 . exon 162593 163733 . - . ID=Thaps25332.2;Parent=Thaps25332;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 163867 164933 . - 0 ID=Thaps25332;Parent=Thaps25332;rank=1 chr18 . exon 163867 164933 . - . ID=Thaps25332.1;Parent=Thaps25332;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 169909 171362 . - . ID=Thaps10807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLJ9];external_name=Thaps10807;logic_name=jgi_thaps3 chr18 ensembl transcript 169909 171362 . - . ID=Thaps10807;Parent=Thaps10807;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 169909 170833 . - 0 ID=Thaps10807;Parent=Thaps10807;rank=2 chr18 . exon 169909 170833 . - . ID=Thaps10807.2;Parent=Thaps10807;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 170938 171362 . - 0 ID=Thaps10807;Parent=Thaps10807;rank=1 chr18 . exon 170938 171362 . - . ID=Thaps10807.1;Parent=Thaps10807;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 177482 179776 . - . ID=Thaps10809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK1];external_name=Thaps10809;logic_name=jgi_thaps3 chr18 ensembl transcript 177482 179776 . - . ID=Thaps10809;Parent=Thaps10809;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 177482 179155 . - 0 ID=Thaps10809;Parent=Thaps10809;rank=2 chr18 . exon 177482 179155 . - . ID=Thaps10809.2;Parent=Thaps10809;constitutive=1;rank=2 chr18 . CDS 179303 179776 . - 0 ID=Thaps10809;Parent=Thaps10809;rank=1 chr18 . exon 179303 179776 . - . ID=Thaps10809.1;Parent=Thaps10809;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 174448 175215 . - . ID=Thaps264492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK0];external_name=Thaps264492;logic_name=jgi_thaps3 chr18 ensembl transcript 174448 175215 . - . ID=Thaps264492;Parent=Thaps264492;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 174448 174565 . - 0 ID=Thaps264492;Parent=Thaps264492;rank=4 chr18 . exon 174448 174565 . - . ID=Thaps264492.4;Parent=Thaps264492;constitutive=1;ensembl_end_phase=1;rank=4 chr18 . CDS 174581 174695 . - 0 ID=Thaps264492;Parent=Thaps264492;rank=3 chr18 . exon 174581 174695 . - . ID=Thaps264492.3;Parent=Thaps264492;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 174732 174829 . - 0 ID=Thaps264492;Parent=Thaps264492;rank=2 chr18 . exon 174732 174829 . - . ID=Thaps264492.2;Parent=Thaps264492;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 174936 175215 . - 0 ID=Thaps264492;Parent=Thaps264492;rank=1 chr18 . exon 174936 175215 . - . ID=Thaps264492.1;Parent=Thaps264492;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . repeat_region 180059 180078 . ? . description=dust chr18 . repeat_region 183647 183656 . ? . description=dust chr18 . repeat_region 185237 185252 . ? . description=dust chr18 . repeat_region 186503 186532 . ? . description=dust chr18 . repeat_region 186503 186536 . ? . description=trf chr18 . repeat_region 187446 187492 . ? . description=dust chr18 . repeat_region 187697 187722 . ? . description=dust chr18 . repeat_region 188029 188061 . ? . description=trf chr18 ensembl protein_coding_gene 180360 182232 . + . ID=Thaps10810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK2];external_name=Thaps10810;logic_name=jgi_thaps3 chr18 ensembl transcript 180360 182232 . + . ID=Thaps10810;Parent=Thaps10810;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 180360 181147 . + 0 ID=Thaps10810;Parent=Thaps10810;rank=1 chr18 . exon 180360 181147 . + . ID=Thaps10810.1;Parent=Thaps10810;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 181228 181301 . + 0 ID=Thaps10810;Parent=Thaps10810;rank=2 chr18 . exon 181228 181301 . + . ID=Thaps10810.2;Parent=Thaps10810;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 181397 182232 . + 0 ID=Thaps10810;Parent=Thaps10810;rank=3 chr18 . exon 181397 182232 . + . ID=Thaps10810.3;Parent=Thaps10810;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 182502 184382 . - . ID=Thaps10811;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK3];external_name=Thaps10811;logic_name=jgi_thaps3 chr18 ensembl transcript 182502 184382 . - . ID=Thaps10811;Parent=Thaps10811;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 182502 183438 . - 0 ID=Thaps10811;Parent=Thaps10811;rank=2 chr18 . exon 182502 183438 . - . ID=Thaps10811.2;Parent=Thaps10811;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 183547 184382 . - 0 ID=Thaps10811;Parent=Thaps10811;rank=1 chr18 . exon 183547 184382 . - . ID=Thaps10811.1;Parent=Thaps10811;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 186219 188636 . + . ID=Thaps10812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK4];external_name=Thaps10812;logic_name=jgi_thaps3 chr18 ensembl transcript 186219 188636 . + . ID=Thaps10812;Parent=Thaps10812;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 186219 188636 . + 0 ID=Thaps10812;Parent=Thaps10812;rank=1 chr18 . exon 186219 188636 . + . ID=Thaps10812.1;Parent=Thaps10812;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 195400 197628 . - . ID=Thaps10814;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK6];external_name=Thaps10814;logic_name=jgi_thaps3 chr18 ensembl transcript 195400 197628 . - . ID=Thaps10814;Parent=Thaps10814;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 195400 195935 . - 0 ID=Thaps10814;Parent=Thaps10814;rank=2 chr18 . exon 195400 195935 . - . ID=Thaps10814.2;Parent=Thaps10814;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 196017 197628 . - 0 ID=Thaps10814;Parent=Thaps10814;rank=1 chr18 . exon 196017 197628 . - . ID=Thaps10814.1;Parent=Thaps10814;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 197950 203678 . - . ID=Thaps10815;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK7];external_name=Thaps10815;logic_name=jgi_thaps3 chr18 ensembl transcript 197950 203678 . - . ID=Thaps10815;Parent=Thaps10815;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 197950 199199 . - 0 ID=Thaps10815;Parent=Thaps10815;rank=3 chr18 . exon 197950 199199 . - . ID=Thaps10815.3;Parent=Thaps10815;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 199268 203181 . - 0 ID=Thaps10815;Parent=Thaps10815;rank=2 chr18 . exon 199268 203181 . - . ID=Thaps10815.2;Parent=Thaps10815;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 203341 203678 . - 0 ID=Thaps10815;Parent=Thaps10815;rank=1 chr18 ensembl protein_coding_gene 192906 193608 . + . ID=Thaps38110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK5];external_name=Thaps38110;logic_name=jgi_thaps3 chr18 ensembl transcript 192906 193608 . + . ID=Thaps38110;Parent=Thaps38110;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 192906 193436 . + 0 ID=Thaps38110;Parent=Thaps38110;rank=1 chr18 . exon 192906 193436 . + . ID=Thaps38110.1;Parent=Thaps38110;constitutive=1;rank=1 chr18 . CDS 193516 193608 . + 0 ID=Thaps38110;Parent=Thaps38110;rank=2 chr18 . exon 193516 193608 . + . ID=Thaps38110.2;Parent=Thaps38110;constitutive=1;rank=2 chr18 . exon 203341 203678 . - . ID=Thaps10815.1;Parent=Thaps10815;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 204218 206077 . + . ID=Thaps10816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK8];external_name=Thaps10816;logic_name=jgi_thaps3 chr18 ensembl transcript 204218 206077 . + . ID=Thaps10816;Parent=Thaps10816;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 204218 206077 . + 0 ID=Thaps10816;Parent=Thaps10816;rank=1 chr18 . exon 204218 206077 . + . ID=Thaps10816.1;Parent=Thaps10816;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 206906 207379 . + . ID=Thaps10817;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLK9];external_name=Thaps10817;logic_name=jgi_thaps3 chr18 ensembl transcript 206906 207379 . + . ID=Thaps10817;Parent=Thaps10817;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 206906 207379 . + 0 ID=Thaps10817;Parent=Thaps10817;rank=1 chr18 . exon 206906 207379 . + . ID=Thaps10817.1;Parent=Thaps10817;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 209142 209985 . + . ID=Thaps10818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLL0];external_name=Thaps10818;logic_name=jgi_thaps3 chr18 ensembl transcript 209142 209985 . + . ID=Thaps10818;Parent=Thaps10818;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 209142 209299 . + 0 ID=Thaps10818;Parent=Thaps10818;rank=1 chr18 . exon 209142 209299 . + . ID=Thaps10818.1;Parent=Thaps10818;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 209493 209985 . + 0 ID=Thaps10818;Parent=Thaps10818;rank=2 chr18 . repeat_region 214102 214152 . ? . description=trf chr18 . repeat_region 214827 214853 . ? . description=trf chr18 . repeat_region 215489 215628 . ? . description=dust chr18 . repeat_region 215497 215517 . ? . description=trf chr18 . repeat_region 215503 215626 . ? . description=trf chr18 . repeat_region 215505 215628 . ? . description=trf chr18 . repeat_region 215508 215609 . ? . description=trf chr18 . repeat_region 215677 215727 . ? . description=trf chr18 . repeat_region 216000 216200 . ? . description=trf chr18 . repeat_region 216064 216118 . ? . description=trf chr18 . repeat_region 217521 217552 . ? . description=trf chr18 . exon 209493 209985 . + . ID=Thaps10818.2;Parent=Thaps10818;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 210395 211488 . - . ID=Thaps10819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLL1];external_name=Thaps10819;logic_name=jgi_thaps3 chr18 ensembl transcript 210395 211488 . - . ID=Thaps10819;Parent=Thaps10819;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 210395 210507 . - 0 ID=Thaps10819;Parent=Thaps10819;rank=3 chr18 . exon 210395 210507 . - . ID=Thaps10819.3;Parent=Thaps10819;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 210633 210916 . - 0 ID=Thaps10819;Parent=Thaps10819;rank=2 chr18 . exon 210633 210916 . - . ID=Thaps10819.2;Parent=Thaps10819;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 211007 211488 . - 0 ID=Thaps10819;Parent=Thaps10819;rank=1 chr18 . exon 211007 211488 . - . ID=Thaps10819.1;Parent=Thaps10819;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 212051 213073 . + . ID=Thaps25335;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLL2];external_name=Thaps25335;logic_name=jgi_thaps3 chr18 ensembl transcript 212051 213073 . + . ID=Thaps25335;Parent=Thaps25335;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 212051 213073 . + 0 ID=Thaps25335;Parent=Thaps25335;rank=1 chr18 . exon 212051 213073 . + . ID=Thaps25335.1;Parent=Thaps25335;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 216396 218995 . + . ID=Thaps25337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLL4];external_name=Thaps25337;logic_name=jgi_thaps3 chr18 ensembl transcript 216396 218995 . + . ID=Thaps25337;Parent=Thaps25337;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 216396 217564 . + 0 ID=Thaps25337;Parent=Thaps25337;rank=1 chr18 . exon 216396 217564 . + . ID=Thaps25337.1;Parent=Thaps25337;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 217678 218570 . + 0 ID=Thaps25337;Parent=Thaps25337;rank=2 chr18 . exon 217678 218570 . + . ID=Thaps25337.2;Parent=Thaps25337;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 218658 218995 . + 0 ID=Thaps25337;Parent=Thaps25337;rank=3 chr18 . exon 218658 218995 . + . ID=Thaps25337.3;Parent=Thaps25337;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 214311 215267 . + . ID=Thaps264494;biotype=protein_coding;description=Sir2-type regulatory transcription factor silent information regulator protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLL3];external_name=Thaps264494;logic_name=jgi_thaps3 chr18 ensembl transcript 214311 215267 . + . ID=Thaps264494;Parent=Thaps264494;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 214311 214351 . + 0 ID=Thaps264494;Parent=Thaps264494;rank=1 chr18 . exon 214311 214351 . + . ID=Thaps264494.1;Parent=Thaps264494;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 214412 215267 . + 0 ID=Thaps264494;Parent=Thaps264494;rank=2 chr18 . exon 214412 215267 . + . ID=Thaps264494.2;Parent=Thaps264494;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 219351 220634 . - . ID=Thaps10823;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLL5];external_name=Thaps10823;logic_name=jgi_thaps3 chr18 ensembl transcript 219351 220634 . - . ID=Thaps10823;Parent=Thaps10823;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 219351 219760 . - 0 ID=Thaps10823;Parent=Thaps10823;rank=3 chr18 . exon 219351 219760 . - . ID=Thaps10823.3;Parent=Thaps10823;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 219899 220214 . - 0 ID=Thaps10823;Parent=Thaps10823;rank=2 chr18 . exon 219899 220214 . - . ID=Thaps10823.2;Parent=Thaps10823;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 220314 220634 . - 0 ID=Thaps10823;Parent=Thaps10823;rank=1 chr18 . exon 220314 220634 . - . ID=Thaps10823.1;Parent=Thaps10823;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 220945 221520 . - . ID=Thaps10824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLL6];external_name=Thaps10824;logic_name=jgi_thaps3 chr18 ensembl transcript 220945 221520 . - . ID=Thaps10824;Parent=Thaps10824;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 220945 221336 . - 0 ID=Thaps10824;Parent=Thaps10824;rank=2 chr18 . exon 220945 221336 . - . ID=Thaps10824.2;Parent=Thaps10824;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 221427 221520 . - 0 ID=Thaps10824;Parent=Thaps10824;rank=1 chr18 . exon 221427 221520 . - . ID=Thaps10824.1;Parent=Thaps10824;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 223062 225203 . + . ID=Thaps25338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLL7];external_name=Thaps25338;logic_name=jgi_thaps3 chr18 ensembl transcript 223062 225203 . + . ID=Thaps25338;Parent=Thaps25338;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 223062 225203 . + 0 ID=Thaps25338;Parent=Thaps25338;rank=1 chr18 . exon 223062 225203 . + . ID=Thaps25338.1;Parent=Thaps25338;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 225837 226262 . + . ID=Thaps264495;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLL8];external_name=Thaps264495;logic_name=jgi_thaps3 chr18 ensembl transcript 225837 226262 . + . ID=Thaps264495;Parent=Thaps264495;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 225837 225918 . + 0 ID=Thaps264495;Parent=Thaps264495;rank=1 chr18 . exon 225837 225918 . + . ID=Thaps264495.1;Parent=Thaps264495;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 226004 226032 . + 0 ID=Thaps264495;Parent=Thaps264495;rank=2 chr18 . exon 226004 226032 . + . ID=Thaps264495.2;Parent=Thaps264495;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 226113 226262 . + 0 ID=Thaps264495;Parent=Thaps264495;rank=3 chr18 . exon 226113 226262 . + . ID=Thaps264495.3;Parent=Thaps264495;constitutive=1;rank=3 chr18 ensembl protein_coding_gene 227737 228953 . + . ID=Thaps264496;biotype=protein_coding;description=Aldo-keto oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B5YLL9];external_name=Thaps264496;logic_name=jgi_thaps3 chr18 ensembl transcript 227737 228953 . + . ID=Thaps264496;Parent=Thaps264496;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 227737 228683 . + 0 ID=Thaps264496;Parent=Thaps264496;rank=1 chr18 . exon 227737 228683 . + . ID=Thaps264496.1;Parent=Thaps264496;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 228866 228953 . + 0 ID=Thaps264496;Parent=Thaps264496;rank=2 chr18 . exon 228866 228953 . + . ID=Thaps264496.2;Parent=Thaps264496;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . repeat_region 234043 234061 . ? . description=dust chr18 ensembl protein_coding_gene 236489 237918 . - . ID=Thaps269935;biotype=protein_coding;description=Histidinol dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B5YLM0];external_name=Thaps269935;logic_name=jgi_thaps3 chr18 ensembl transcript 236489 237918 . - . ID=Thaps269935;Parent=Thaps269935;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 236489 237432 . - 0 ID=Thaps269935;Parent=Thaps269935;rank=2 chr18 . exon 236489 237432 . - . ID=Thaps269935.2;Parent=Thaps269935;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 237537 237918 . - 0 ID=Thaps269935;Parent=Thaps269935;rank=1 chr18 . exon 237537 237918 . - . ID=Thaps269935.1;Parent=Thaps269935;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 239964 241133 . - . ID=Thaps10828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLM1];external_name=Thaps10828;logic_name=jgi_thaps3 chr18 ensembl transcript 239964 241133 . - . ID=Thaps10828;Parent=Thaps10828;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 239964 241133 . - 0 ID=Thaps10828;Parent=Thaps10828;rank=1 chr18 . exon 239964 241133 . - . ID=Thaps10828.1;Parent=Thaps10828;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 243912 245241 . - . ID=Thaps10830;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLM3];external_name=Thaps10830;logic_name=jgi_thaps3 chr18 ensembl transcript 243912 245241 . - . ID=Thaps10830;Parent=Thaps10830;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 243912 244521 . - 0 ID=Thaps10830;Parent=Thaps10830;rank=2 chr18 . exon 243912 244521 . - . ID=Thaps10830.2;Parent=Thaps10830;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 244598 245241 . - 0 ID=Thaps10830;Parent=Thaps10830;rank=1 chr18 . exon 244598 245241 . - . ID=Thaps10830.1;Parent=Thaps10830;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 246245 247450 . + . ID=Thaps10831;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLM4];external_name=Thaps10831;logic_name=jgi_thaps3 chr18 ensembl transcript 246245 247450 . + . ID=Thaps10831;Parent=Thaps10831;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 246245 247450 . + 0 ID=Thaps10831;Parent=Thaps10831;rank=1 chr18 . exon 246245 247450 . + . ID=Thaps10831.1;Parent=Thaps10831;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 242039 243370 . + . ID=Thaps25340;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLM2];external_name=Thaps25340;logic_name=jgi_thaps3 chr18 ensembl transcript 242039 243370 . + . ID=Thaps25340;Parent=Thaps25340;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 242039 243370 . + 0 ID=Thaps25340;Parent=Thaps25340;rank=1 chr18 . exon 242039 243370 . + . ID=Thaps25340.1;Parent=Thaps25340;constitutive=1;rank=1 chr18 . repeat_region 249327 249355 . ? . description=trf chr18 . repeat_region 250503 250603 . ? . description=trf chr18 . repeat_region 258390 258415 . ? . description=trf chr18 . repeat_region 258390 258415 . ? . description=dust chr18 ensembl protein_coding_gene 249582 255273 . + . ID=Thaps10832;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLM5];external_name=Thaps10832;logic_name=jgi_thaps3 chr18 ensembl transcript 249582 255273 . + . ID=Thaps10832;Parent=Thaps10832;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 249582 250074 . + 0 ID=Thaps10832;Parent=Thaps10832;rank=1 chr18 . exon 249582 250074 . + . ID=Thaps10832.1;Parent=Thaps10832;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 250171 251121 . + 0 ID=Thaps10832;Parent=Thaps10832;rank=2 chr18 . exon 250171 251121 . + . ID=Thaps10832.2;Parent=Thaps10832;constitutive=1;rank=2 chr18 . CDS 251208 251510 . + 0 ID=Thaps10832;Parent=Thaps10832;rank=3 chr18 . exon 251208 251510 . + . ID=Thaps10832.3;Parent=Thaps10832;constitutive=1;rank=3 chr18 . CDS 251595 252302 . + 0 ID=Thaps10832;Parent=Thaps10832;rank=4 chr18 . exon 251595 252302 . + . ID=Thaps10832.4;Parent=Thaps10832;constitutive=1;rank=4 chr18 . CDS 252368 253747 . + 0 ID=Thaps10832;Parent=Thaps10832;rank=5 chr18 . exon 252368 253747 . + . ID=Thaps10832.5;Parent=Thaps10832;constitutive=1;rank=5 chr18 . CDS 253835 255273 . + 0 ID=Thaps10832;Parent=Thaps10832;rank=6 chr18 . exon 253835 255273 . + . ID=Thaps10832.6;Parent=Thaps10832;constitutive=1;ensembl_end_phase=2;rank=6 chr18 ensembl protein_coding_gene 256263 256595 . + . ID=Thaps10833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLM6];external_name=Thaps10833;logic_name=jgi_thaps3 chr18 ensembl transcript 256263 256595 . + . ID=Thaps10833;Parent=Thaps10833;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 256263 256595 . + 0 ID=Thaps10833;Parent=Thaps10833;rank=1 chr18 . exon 256263 256595 . + . ID=Thaps10833.1;Parent=Thaps10833;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 256718 258376 . - . ID=Thaps264498;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLM7];external_name=Thaps264498;logic_name=jgi_thaps3 chr18 ensembl transcript 256718 258376 . - . ID=Thaps264498;Parent=Thaps264498;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 256718 257345 . - 0 ID=Thaps264498;Parent=Thaps264498;rank=5 chr18 . exon 256718 257345 . - . ID=Thaps264498.5;Parent=Thaps264498;constitutive=1;ensembl_end_phase=1;rank=5 chr18 . CDS 257514 257644 . - 0 ID=Thaps264498;Parent=Thaps264498;rank=4 chr18 . exon 257514 257644 . - . ID=Thaps264498.4;Parent=Thaps264498;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 257711 257985 . - 0 ID=Thaps264498;Parent=Thaps264498;rank=3 chr18 . exon 257711 257985 . - . ID=Thaps264498.3;Parent=Thaps264498;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 258106 258175 . - 0 ID=Thaps264498;Parent=Thaps264498;rank=2 chr18 . exon 258106 258175 . - . ID=Thaps264498.2;Parent=Thaps264498;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 258224 258376 . - 0 ID=Thaps264498;Parent=Thaps264498;rank=1 chr18 . exon 258224 258376 . - . ID=Thaps264498.1;Parent=Thaps264498;constitutive=1;rank=1 chr18 . repeat_region 265849 266199 . + . description=Harbinger3_TP chr18 . repeat_region 267684 267860 . + . description=Harbinger3_TP chr18 ensembl protein_coding_gene 262244 263582 . + . ID=Thaps10835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLM8];external_name=Thaps10835;logic_name=jgi_thaps3 chr18 ensembl transcript 262244 263582 . + . ID=Thaps10835;Parent=Thaps10835;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 262244 262887 . + 0 ID=Thaps10835;Parent=Thaps10835;rank=1 chr18 . exon 262244 262887 . + . ID=Thaps10835.1;Parent=Thaps10835;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 262964 263582 . + 0 ID=Thaps10835;Parent=Thaps10835;rank=2 chr18 . exon 262964 263582 . + . ID=Thaps10835.2;Parent=Thaps10835;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 263986 264666 . - . ID=Thaps10836;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLM9];external_name=Thaps10836;logic_name=jgi_thaps3 chr18 ensembl transcript 263986 264666 . - . ID=Thaps10836;Parent=Thaps10836;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 263986 264666 . - 0 ID=Thaps10836;Parent=Thaps10836;rank=1 chr18 . exon 263986 264666 . - . ID=Thaps10836.1;Parent=Thaps10836;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 267975 269433 . - . ID=Thaps10837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLN0];external_name=Thaps10837;logic_name=jgi_thaps3 chr18 ensembl transcript 267975 269433 . - . ID=Thaps10837;Parent=Thaps10837;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 267975 267987 . - 0 ID=Thaps10837;Parent=Thaps10837;rank=3 chr18 . exon 267975 267987 . - . ID=Thaps10837.3;Parent=Thaps10837;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 268027 268577 . - 0 ID=Thaps10837;Parent=Thaps10837;rank=2 chr18 . exon 268027 268577 . - . ID=Thaps10837.2;Parent=Thaps10837;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 268651 269433 . - 0 ID=Thaps10837;Parent=Thaps10837;rank=1 chr18 . exon 268651 269433 . - . ID=Thaps10837.1;Parent=Thaps10837;constitutive=1;rank=1 chr18 . repeat_region 270181 270207 . ? . description=trf chr18 . repeat_region 272819 272828 . ? . description=dust chr18 ensembl protein_coding_gene 270152 272422 . + . ID=Thaps25342;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLN1];external_name=Thaps25342;logic_name=jgi_thaps3 chr18 ensembl transcript 270152 272422 . + . ID=Thaps25342;Parent=Thaps25342;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 270152 270856 . + 0 ID=Thaps25342;Parent=Thaps25342;rank=1 chr18 . exon 270152 270856 . + . ID=Thaps25342.1;Parent=Thaps25342;constitutive=1;rank=1 chr18 . CDS 270980 272422 . + 0 ID=Thaps25342;Parent=Thaps25342;rank=2 chr18 . exon 270980 272422 . + . ID=Thaps25342.2;Parent=Thaps25342;constitutive=1;rank=2 chr18 ensembl protein_coding_gene 276409 279110 . + . ID=Thaps269937;biotype=protein_coding;description=Aminopeptidase with a membrane alanine aminopeptidase domain [Source:UniProtKB/TrEMBL%3BAcc:B5YLN3];external_name=Thaps269937;logic_name=jgi_thaps3 chr18 ensembl transcript 276409 279110 . + . ID=Thaps269937;Parent=Thaps269937;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 276409 276447 . + 0 ID=Thaps269937;Parent=Thaps269937;rank=1 chr18 . exon 276409 276447 . + . ID=Thaps269937.1;Parent=Thaps269937;constitutive=1;rank=1 chr18 . CDS 276481 276582 . + 0 ID=Thaps269937;Parent=Thaps269937;rank=2 chr18 . exon 276481 276582 . + . ID=Thaps269937.2;Parent=Thaps269937;constitutive=1;rank=2 chr18 . CDS 276783 279110 . + 0 ID=Thaps269937;Parent=Thaps269937;rank=3 chr18 . exon 276783 279110 . + . ID=Thaps269937.3;Parent=Thaps269937;constitutive=1;rank=3 chr18 ensembl protein_coding_gene 272866 273455 . - . ID=Thaps38190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLN2];external_name=Thaps38190;logic_name=jgi_thaps3 chr18 ensembl transcript 272866 273455 . - . ID=Thaps38190;Parent=Thaps38190;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 272866 273003 . - 0 ID=Thaps38190;Parent=Thaps38190;rank=3 chr18 . exon 272866 273003 . - . ID=Thaps38190.3;Parent=Thaps38190;constitutive=1;rank=3 chr18 . CDS 273132 273299 . - 0 ID=Thaps38190;Parent=Thaps38190;rank=2 chr18 . exon 273132 273299 . - . ID=Thaps38190.2;Parent=Thaps38190;constitutive=1;rank=2 chr18 . CDS 273429 273455 . - 0 ID=Thaps38190;Parent=Thaps38190;rank=1 chr18 . exon 273429 273455 . - . ID=Thaps38190.1;Parent=Thaps38190;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 279285 281721 . - . ID=Thaps10842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLN4];external_name=Thaps10842;logic_name=jgi_thaps3 chr18 ensembl transcript 279285 281721 . - . ID=Thaps10842;Parent=Thaps10842;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 279285 279910 . - 0 ID=Thaps10842;Parent=Thaps10842;rank=3 chr18 . exon 279285 279910 . - . ID=Thaps10842.3;Parent=Thaps10842;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 280008 280762 . - 0 ID=Thaps10842;Parent=Thaps10842;rank=2 chr18 . exon 280008 280762 . - . ID=Thaps10842.2;Parent=Thaps10842;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 280874 281721 . - 0 ID=Thaps10842;Parent=Thaps10842;rank=1 chr18 . exon 280874 281721 . - . ID=Thaps10842.1;Parent=Thaps10842;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 285368 285940 . + . ID=Thaps38054;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLN6];external_name=Thaps38054;logic_name=jgi_thaps3 chr18 ensembl transcript 285368 285940 . + . ID=Thaps38054;Parent=Thaps38054;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 285368 285940 . + 0 ID=Thaps38054;Parent=Thaps38054;rank=1 chr18 . exon 285368 285940 . + . ID=Thaps38054.1;Parent=Thaps38054;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 288105 289598 . - . ID=Thaps38149;biotype=protein_coding;description=Acetyl CoA transporter [Source:UniProtKB/TrEMBL%3BAcc:B5YLN8];external_name=Thaps38149;logic_name=jgi_thaps3 chr18 ensembl transcript 288105 289598 . - . ID=Thaps38149;Parent=Thaps38149;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 288105 288938 . - 0 ID=Thaps38149;Parent=Thaps38149;rank=3 chr18 . exon 288105 288938 . - . ID=Thaps38149.3;Parent=Thaps38149;constitutive=1;rank=3 chr18 . CDS 288990 289381 . - 0 ID=Thaps38149;Parent=Thaps38149;rank=2 chr18 . CDS 289433 289598 . - 0 ID=Thaps38149;Parent=Thaps38149;rank=1 chr18 ensembl protein_coding_gene 282498 284533 . - . ID=Thaps38194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLN5];external_name=Thaps38194;logic_name=jgi_thaps3 chr18 ensembl transcript 282498 284533 . - . ID=Thaps38194;Parent=Thaps38194;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 282498 283616 . - 0 ID=Thaps38194;Parent=Thaps38194;rank=4 chr18 . exon 282498 283616 . - . ID=Thaps38194.4;Parent=Thaps38194;constitutive=1;rank=4 chr18 . CDS 283703 283849 . - 0 ID=Thaps38194;Parent=Thaps38194;rank=3 chr18 . exon 283703 283849 . - . ID=Thaps38194.3;Parent=Thaps38194;constitutive=1;rank=3 chr18 . CDS 283965 284265 . - 0 ID=Thaps38194;Parent=Thaps38194;rank=2 chr18 . exon 283965 284265 . - . ID=Thaps38194.2;Parent=Thaps38194;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 284364 284533 . - 0 ID=Thaps38194;Parent=Thaps38194;rank=1 chr18 . exon 284364 284533 . - . ID=Thaps38194.1;Parent=Thaps38194;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 286492 287613 . + . ID=Thaps802;biotype=protein_coding;description=RL5%2C ribosomal protein 5%2C 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YLN7];external_name=RL5;logic_name=jgi_thaps3 chr18 ensembl transcript 286492 287613 . + . ID=Thaps802;Parent=Thaps802;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 286492 286494 . + 0 ID=Thaps802;Parent=Thaps802;rank=1 chr18 . exon 286492 286494 . + . ID=Thaps802.1;Parent=Thaps802;constitutive=1;rank=1 chr18 . CDS 286696 287613 . + 0 ID=Thaps802;Parent=Thaps802;rank=2 chr18 . exon 286696 287613 . + . ID=Thaps802.2;Parent=Thaps802;constitutive=1;rank=2 chr18 . repeat_region 290357 290365 . ? . description=dust chr18 . repeat_region 294575 294630 . ? . description=trf chr18 . repeat_region 296976 296998 . ? . description=dust chr18 ensembl protein_coding_gene 290618 292390 . - . ID=Thaps10847;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLN9];external_name=Thaps10847;logic_name=jgi_thaps3 chr18 ensembl transcript 290618 292390 . - . ID=Thaps10847;Parent=Thaps10847;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 290618 292390 . - 0 ID=Thaps10847;Parent=Thaps10847;rank=1 chr18 . exon 290618 292390 . - . ID=Thaps10847.1;Parent=Thaps10847;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 293321 294310 . + . ID=Thaps10848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLP0];external_name=Thaps10848;logic_name=jgi_thaps3 chr18 ensembl transcript 293321 294310 . + . ID=Thaps10848;Parent=Thaps10848;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 293321 294310 . + 0 ID=Thaps10848;Parent=Thaps10848;rank=1 chr18 . exon 293321 294310 . + . ID=Thaps10848.1;Parent=Thaps10848;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 295613 296806 . - . ID=Thaps10850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLP2];external_name=Thaps10850;logic_name=jgi_thaps3 chr18 ensembl transcript 295613 296806 . - . ID=Thaps10850;Parent=Thaps10850;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 295613 296806 . - 0 ID=Thaps10850;Parent=Thaps10850;rank=1 chr18 . exon 295613 296806 . - . ID=Thaps10850.1;Parent=Thaps10850;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 294648 295250 . - . ID=Thaps25346;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLP1];external_name=Thaps25346;logic_name=jgi_thaps3 chr18 ensembl transcript 294648 295250 . - . ID=Thaps25346;Parent=Thaps25346;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 294648 295250 . - 0 ID=Thaps25346;Parent=Thaps25346;rank=1 chr18 . exon 294648 295250 . - . ID=Thaps25346.1;Parent=Thaps25346;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 298078 298736 . + . ID=Thaps25347;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLP3];external_name=Thaps25347;logic_name=jgi_thaps3 chr18 ensembl transcript 298078 298736 . + . ID=Thaps25347;Parent=Thaps25347;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 298078 298251 . + 0 ID=Thaps25347;Parent=Thaps25347;rank=1 chr18 . exon 298078 298251 . + . ID=Thaps25347.1;Parent=Thaps25347;constitutive=1;rank=1 chr18 . CDS 298368 298736 . + 0 ID=Thaps25347;Parent=Thaps25347;rank=2 chr18 . exon 298368 298736 . + . ID=Thaps25347.2;Parent=Thaps25347;constitutive=1;rank=2 chr18 . exon 288990 289381 . - . ID=Thaps38149.2;Parent=Thaps38149;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . exon 289433 289598 . - . ID=Thaps38149.1;Parent=Thaps38149;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 301264 302004 . - . ID=Thaps10853;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLP5];external_name=Thaps10853;logic_name=jgi_thaps3 chr18 ensembl transcript 301264 302004 . - . ID=Thaps10853;Parent=Thaps10853;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 301264 302004 . - 0 ID=Thaps10853;Parent=Thaps10853;rank=1 chr18 . exon 301264 302004 . - . ID=Thaps10853.1;Parent=Thaps10853;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 307896 309120 . - . ID=Thaps10856;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLP9];external_name=Thaps10856;logic_name=jgi_thaps3 chr18 ensembl transcript 307896 309120 . - . ID=Thaps10856;Parent=Thaps10856;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 307896 308204 . - 0 ID=Thaps10856;Parent=Thaps10856;rank=2 chr18 . exon 307896 308204 . - . ID=Thaps10856.2;Parent=Thaps10856;constitutive=1;rank=2 chr18 . CDS 308485 309120 . - 0 ID=Thaps10856;Parent=Thaps10856;rank=1 chr18 . exon 308485 309120 . - . ID=Thaps10856.1;Parent=Thaps10856;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 305875 307572 . + . ID=Thaps25349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLP8];external_name=Thaps25349;logic_name=jgi_thaps3 chr18 ensembl transcript 305875 307572 . + . ID=Thaps25349;Parent=Thaps25349;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 305875 307572 . + 0 ID=Thaps25349;Parent=Thaps25349;rank=1 chr18 . exon 305875 307572 . + . ID=Thaps25349.1;Parent=Thaps25349;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 302989 303207 . + . ID=Thaps38207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLP6];external_name=Thaps38207;logic_name=jgi_thaps3 chr18 ensembl transcript 302989 303207 . + . ID=Thaps38207;Parent=Thaps38207;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 302989 303207 . + 0 ID=Thaps38207;Parent=Thaps38207;rank=1 chr18 . exon 302989 303207 . + . ID=Thaps38207.1;Parent=Thaps38207;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 303853 304383 . - . ID=Thaps42740;biotype=protein_coding;description=dCMP deaminase [Source:UniProtKB/TrEMBL%3BAcc:B5YLP7];external_name=Thaps42740;logic_name=jgi_thaps3 chr18 ensembl transcript 303853 304383 . - . ID=Thaps42740;Parent=Thaps42740;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 303853 304383 . - 0 ID=Thaps42740;Parent=Thaps42740;rank=1 chr18 . exon 303853 304383 . - . ID=Thaps42740.1;Parent=Thaps42740;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 300127 301137 . + . ID=Thaps803;biotype=protein_coding;description=Synaptobrevin [Source:UniProtKB/TrEMBL%3BAcc:B5YLP4];external_name=Thaps803;logic_name=jgi_thaps3 chr18 ensembl transcript 300127 301137 . + . ID=Thaps803;Parent=Thaps803;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 300127 300193 . + 0 ID=Thaps803;Parent=Thaps803;rank=1 chr18 . exon 300127 300193 . + . ID=Thaps803.1;Parent=Thaps803;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 300448 300533 . + 0 ID=Thaps803;Parent=Thaps803;rank=2 chr18 . exon 300448 300533 . + . ID=Thaps803.2;Parent=Thaps803;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 300625 301137 . + 0 ID=Thaps803;Parent=Thaps803;rank=3 chr18 . exon 300625 301137 . + . ID=Thaps803.3;Parent=Thaps803;constitutive=1;rank=3 chr18 . repeat_region 309135 309148 . ? . description=dust chr18 . repeat_region 311819 311859 . ? . description=trf chr18 . repeat_region 311841 311981 . ? . description=trf chr18 . repeat_region 311841 312127 . ? . description=trf chr18 . repeat_region 311903 312062 . ? . description=trf chr18 . repeat_region 311984 312138 . ? . description=trf chr18 . repeat_region 312820 312840 . ? . description=trf chr18 . repeat_region 312918 313078 . + . description=Gypsy1ALTR_TP chr18 . repeat_region 318828 318859 . ? . description=dust chr18 . repeat_region 318831 318850 . ? . description=trf chr18 ensembl protein_coding_gene 311485 312369 . - . ID=Thaps10858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ1];external_name=Thaps10858;logic_name=jgi_thaps3 chr18 ensembl transcript 311485 312369 . - . ID=Thaps10858;Parent=Thaps10858;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 311485 312369 . - 0 ID=Thaps10858;Parent=Thaps10858;rank=1 chr18 . exon 311485 312369 . - . ID=Thaps10858.1;Parent=Thaps10858;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 314776 315895 . - . ID=Thaps10860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ3];external_name=Thaps10860;logic_name=jgi_thaps3 chr18 ensembl transcript 314776 315895 . - . ID=Thaps10860;Parent=Thaps10860;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 314776 315428 . - 0 ID=Thaps10860;Parent=Thaps10860;rank=2 chr18 . exon 314776 315428 . - . ID=Thaps10860.2;Parent=Thaps10860;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 315544 315895 . - 0 ID=Thaps10860;Parent=Thaps10860;rank=1 chr18 . exon 315544 315895 . - . ID=Thaps10860.1;Parent=Thaps10860;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 317226 318335 . + . ID=Thaps16503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ4];external_name=Thaps16503;logic_name=jgi_thaps3 chr18 ensembl transcript 317226 318335 . + . ID=Thaps16503;Parent=Thaps16503;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 317226 317386 . + 0 ID=Thaps16503;Parent=Thaps16503;rank=1 chr18 . exon 317226 317386 . + . ID=Thaps16503.1;Parent=Thaps16503;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 317543 317607 . + 0 ID=Thaps16503;Parent=Thaps16503;rank=2 chr18 . exon 317543 317607 . + . ID=Thaps16503.2;Parent=Thaps16503;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 317938 318335 . + 0 ID=Thaps16503;Parent=Thaps16503;rank=3 chr18 . exon 317938 318335 . + . ID=Thaps16503.3;Parent=Thaps16503;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 309568 311364 . + . ID=Thaps25350;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ0];external_name=Thaps25350;logic_name=jgi_thaps3 chr18 ensembl transcript 309568 311364 . + . ID=Thaps25350;Parent=Thaps25350;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 309568 311364 . + 0 ID=Thaps25350;Parent=Thaps25350;rank=1 chr18 . exon 309568 311364 . + . ID=Thaps25350.1;Parent=Thaps25350;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 313144 314280 . + . ID=Thaps25351;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ2];external_name=Thaps25351;logic_name=jgi_thaps3 chr18 ensembl transcript 313144 314280 . + . ID=Thaps25351;Parent=Thaps25351;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 313144 314280 . + 0 ID=Thaps25351;Parent=Thaps25351;rank=1 chr18 . exon 313144 314280 . + . ID=Thaps25351.1;Parent=Thaps25351;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 321286 322142 . + . ID=Thaps25353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ6];external_name=Thaps25353;logic_name=jgi_thaps3 chr18 ensembl transcript 321286 322142 . + . ID=Thaps25353;Parent=Thaps25353;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 321286 321767 . + 0 ID=Thaps25353;Parent=Thaps25353;rank=1 chr18 . exon 321286 321767 . + . ID=Thaps25353.1;Parent=Thaps25353;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 321935 322142 . + 0 ID=Thaps25353;Parent=Thaps25353;rank=2 chr18 . exon 321935 322142 . + . ID=Thaps25353.2;Parent=Thaps25353;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 325844 327552 . - . ID=Thaps25355;biotype=protein_coding;description=Protein translocase complex subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ8];external_name=SEC61-1;logic_name=jgi_thaps3 chr18 ensembl transcript 325844 327552 . - . ID=Thaps25355;Parent=Thaps25355;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 325844 327196 . - 0 ID=Thaps25355;Parent=Thaps25355;rank=2 chr18 . exon 325844 327196 . - . ID=Thaps25355.2;Parent=Thaps25355;constitutive=1;rank=2 chr18 . CDS 327484 327552 . - 0 ID=Thaps25355;Parent=Thaps25355;rank=1 chr18 . exon 327484 327552 . - . ID=Thaps25355.1;Parent=Thaps25355;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 322436 324155 . - . ID=Thaps269942;biotype=protein_coding;description=Serine hydroxymethyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ7];external_name=Thaps269942;logic_name=jgi_thaps3 chr18 ensembl transcript 322436 324155 . - . ID=Thaps269942;Parent=Thaps269942;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 322436 323551 . - 0 ID=Thaps269942;Parent=Thaps269942;rank=2 chr18 . exon 322436 323551 . - . ID=Thaps269942.2;Parent=Thaps269942;constitutive=1;rank=2 chr18 . CDS 323676 324155 . - 0 ID=Thaps269942;Parent=Thaps269942;rank=1 chr18 . exon 323676 324155 . - . ID=Thaps269942.1;Parent=Thaps269942;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 328180 328789 . - . ID=Thaps38153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ9];external_name=Thaps38153;logic_name=jgi_thaps3 chr18 ensembl transcript 328180 328789 . - . ID=Thaps38153;Parent=Thaps38153;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 328180 328400 . - 0 ID=Thaps38153;Parent=Thaps38153;rank=2 chr18 . exon 328180 328400 . - . ID=Thaps38153.2;Parent=Thaps38153;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 328489 328789 . - 0 ID=Thaps38153;Parent=Thaps38153;rank=1 chr18 . exon 328489 328789 . - . ID=Thaps38153.1;Parent=Thaps38153;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 318942 320708 . - . ID=Thaps38191;biotype=protein_coding;description=Mitochondrial chaperonin [Source:UniProtKB/TrEMBL%3BAcc:B5YLQ5];external_name=HSP60;logic_name=jgi_thaps3 chr18 ensembl transcript 318942 320708 . - . ID=Thaps38191;Parent=Thaps38191;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 318942 320528 . - 0 ID=Thaps38191;Parent=Thaps38191;rank=2 chr18 . exon 318942 320528 . - . ID=Thaps38191.2;Parent=Thaps38191;constitutive=1;rank=2 chr18 . CDS 320622 320708 . - 0 ID=Thaps38191;Parent=Thaps38191;rank=1 chr18 . exon 320622 320708 . - . ID=Thaps38191.1;Parent=Thaps38191;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 329446 335080 . + . ID=Thaps10867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLR0];external_name=Thaps10867;logic_name=jgi_thaps3 chr18 ensembl transcript 329446 335080 . + . ID=Thaps10867;Parent=Thaps10867;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 329446 334888 . + 0 ID=Thaps10867;Parent=Thaps10867;rank=1 chr18 . exon 329446 334888 . + . ID=Thaps10867.1;Parent=Thaps10867;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 334941 335080 . + 0 ID=Thaps10867;Parent=Thaps10867;rank=2 chr18 . exon 334941 335080 . + . ID=Thaps10867.2;Parent=Thaps10867;constitutive=1;ensembl_end_phase=2;rank=2 chr18 ensembl protein_coding_gene 335248 340351 . - . ID=Thaps25356;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLR1];external_name=Thaps25356;logic_name=jgi_thaps3 chr18 ensembl transcript 335248 340351 . - . ID=Thaps25356;Parent=Thaps25356;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 335248 335597 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=10 chr18 . exon 335248 335597 . - . ID=Thaps25356.10;Parent=Thaps25356;constitutive=1;ensembl_end_phase=2;rank=10 chr18 . CDS 335706 335807 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=9 chr18 . exon 335706 335807 . - . ID=Thaps25356.9;Parent=Thaps25356;constitutive=1;rank=9 chr18 . CDS 335901 335932 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=8 chr18 . exon 335901 335932 . - . ID=Thaps25356.8;Parent=Thaps25356;constitutive=1;ensembl_end_phase=2;rank=8 chr18 . CDS 336019 336124 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=7 chr18 . exon 336019 336124 . - . ID=Thaps25356.7;Parent=Thaps25356;constitutive=1;ensembl_end_phase=1;rank=7 chr18 . CDS 336203 336245 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=6 chr18 . exon 336203 336245 . - . ID=Thaps25356.6;Parent=Thaps25356;constitutive=1;ensembl_end_phase=1;rank=6 chr18 . CDS 336336 336619 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=5 chr18 . exon 336336 336619 . - . ID=Thaps25356.5;Parent=Thaps25356;constitutive=1;ensembl_end_phase=2;rank=5 chr18 . CDS 336714 337098 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=4 chr18 . exon 336714 337098 . - . ID=Thaps25356.4;Parent=Thaps25356;constitutive=1;ensembl_end_phase=1;rank=4 chr18 . CDS 337178 338662 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=3 chr18 . exon 337178 338662 . - . ID=Thaps25356.3;Parent=Thaps25356;constitutive=1;rank=3 chr18 . CDS 338774 339525 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=2 chr18 . exon 338774 339525 . - . ID=Thaps25356.2;Parent=Thaps25356;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 339694 340351 . - 0 ID=Thaps25356;Parent=Thaps25356;rank=1 chr18 . repeat_region 339274 339367 . ? . description=trf chr18 . repeat_region 339281 339451 . ? . description=trf chr18 . repeat_region 339317 339415 . ? . description=trf chr18 . repeat_region 339353 339379 . ? . description=trf chr18 . repeat_region 339365 339484 . ? . description=trf chr18 . repeat_region 339605 339676 . + . description=Harbinger2N_TP chr18 . repeat_region 342083 342092 . ? . description=dust chr18 ensembl protein_coding_gene 340469 341796 . - . ID=Thaps10869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLR2];external_name=Thaps10869;logic_name=jgi_thaps3 chr18 ensembl transcript 340469 341796 . - . ID=Thaps10869;Parent=Thaps10869;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 340469 341500 . - 0 ID=Thaps10869;Parent=Thaps10869;rank=2 chr18 . exon 340469 341500 . - . ID=Thaps10869.2;Parent=Thaps10869;constitutive=1;rank=2 chr18 . CDS 341584 341796 . - 0 ID=Thaps10869;Parent=Thaps10869;rank=1 chr18 . exon 341584 341796 . - . ID=Thaps10869.1;Parent=Thaps10869;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 344878 345642 . + . ID=Thaps10871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLR4];external_name=Thaps10871;logic_name=jgi_thaps3 chr18 ensembl transcript 344878 345642 . + . ID=Thaps10871;Parent=Thaps10871;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 344878 345642 . + 0 ID=Thaps10871;Parent=Thaps10871;rank=1 chr18 . exon 344878 345642 . + . ID=Thaps10871.1;Parent=Thaps10871;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 342234 342461 . - . ID=Thaps20268;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLR3];external_name=Thaps20268;logic_name=jgi_thaps3 chr18 ensembl transcript 342234 342461 . - . ID=Thaps20268;Parent=Thaps20268;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 342234 342461 . - 0 ID=Thaps20268;Parent=Thaps20268;rank=1 chr18 . exon 342234 342461 . - . ID=Thaps20268.1;Parent=Thaps20268;constitutive=1;rank=1 chr18 . exon 339694 340351 . - . ID=Thaps25356.1;Parent=Thaps25356;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 347361 348869 . + . ID=Thaps25357;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLR5];external_name=Thaps25357;logic_name=jgi_thaps3 chr18 ensembl transcript 347361 348869 . + . ID=Thaps25357;Parent=Thaps25357;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 347361 348869 . + 0 ID=Thaps25357;Parent=Thaps25357;rank=1 chr18 . exon 347361 348869 . + . ID=Thaps25357.1;Parent=Thaps25357;constitutive=1;rank=1 chr18 . repeat_region 349882 350633 . - . description=scaffold_2_372_1_866692_867984 chr18 . biological_region 350558 350563 0.999 - . logic_name=eponine chr18 ensembl protein_coding_gene 350720 351124 . - . ID=Thaps10873;biotype=protein_coding;external_name=Thaps10873;logic_name=jgi_thaps3 chr18 ensembl transcript 350720 351124 . - . ID=Thaps10873;Parent=Thaps10873;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 350720 351124 . - 0 ID=Thaps10873;Parent=Thaps10873;rank=1 chr18 . exon 350720 351124 . - . ID=Thaps10873.1;Parent=Thaps10873;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 356447 358693 . - . ID=Thaps10876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLR9];external_name=Thaps10876;logic_name=jgi_thaps3 chr18 ensembl transcript 356447 358693 . - . ID=Thaps10876;Parent=Thaps10876;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 356447 358113 . - 0 ID=Thaps10876;Parent=Thaps10876;rank=3 chr18 . exon 356447 358113 . - . ID=Thaps10876.3;Parent=Thaps10876;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 358240 358381 . - 0 ID=Thaps10876;Parent=Thaps10876;rank=2 chr18 . exon 358240 358381 . - . ID=Thaps10876.2;Parent=Thaps10876;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 358553 358693 . - 0 ID=Thaps10876;Parent=Thaps10876;rank=1 chr18 . exon 358553 358693 . - . ID=Thaps10876.1;Parent=Thaps10876;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 351571 353085 . + . ID=Thaps25359;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLR7];external_name=Thaps25359;logic_name=jgi_thaps3 chr18 ensembl transcript 351571 353085 . + . ID=Thaps25359;Parent=Thaps25359;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 351571 353085 . + 0 ID=Thaps25359;Parent=Thaps25359;rank=1 chr18 . exon 351571 353085 . + . ID=Thaps25359.1;Parent=Thaps25359;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 353768 355499 . + . ID=Thaps25360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLR8];external_name=Thaps25360;logic_name=jgi_thaps3 chr18 ensembl transcript 353768 355499 . + . ID=Thaps25360;Parent=Thaps25360;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 353768 354603 . + 0 ID=Thaps25360;Parent=Thaps25360;rank=1 chr18 . exon 353768 354603 . + . ID=Thaps25360.1;Parent=Thaps25360;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 354758 355499 . + 0 ID=Thaps25360;Parent=Thaps25360;rank=2 chr18 . exon 354758 355499 . + . ID=Thaps25360.2;Parent=Thaps25360;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 360477 362277 . + . ID=Thaps10878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLS1];external_name=Thaps10878;logic_name=jgi_thaps3 chr18 ensembl transcript 360477 362277 . + . ID=Thaps10878;Parent=Thaps10878;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 360477 360840 . + 0 ID=Thaps10878;Parent=Thaps10878;rank=1 chr18 . exon 360477 360840 . + . ID=Thaps10878.1;Parent=Thaps10878;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 361093 361919 . + 0 ID=Thaps10878;Parent=Thaps10878;rank=2 chr18 . exon 361093 361919 . + . ID=Thaps10878.2;Parent=Thaps10878;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 362011 362277 . + 0 ID=Thaps10878;Parent=Thaps10878;rank=3 chr18 . exon 362011 362277 . + . ID=Thaps10878.3;Parent=Thaps10878;constitutive=1;rank=3 chr18 ensembl protein_coding_gene 368270 370883 . + . ID=Thaps10881;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLS4];external_name=Thaps10881;logic_name=jgi_thaps3 chr18 ensembl transcript 368270 370883 . + . ID=Thaps10881;Parent=Thaps10881;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 368270 369555 . + 0 ID=Thaps10881;Parent=Thaps10881;rank=1 chr18 . exon 368270 369555 . + . ID=Thaps10881.1;Parent=Thaps10881;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 369644 369883 . + 0 ID=Thaps10881;Parent=Thaps10881;rank=2 chr18 . CDS 369959 370883 . + 0 ID=Thaps10881;Parent=Thaps10881;rank=3 chr18 ensembl protein_coding_gene 364540 367617 . - . ID=Thaps25361;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLS3];external_name=Thaps25361;logic_name=jgi_thaps3 chr18 ensembl transcript 364540 367617 . - . ID=Thaps25361;Parent=Thaps25361;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 364540 364943 . - 0 ID=Thaps25361;Parent=Thaps25361;rank=2 chr18 . exon 364540 364943 . - . ID=Thaps25361.2;Parent=Thaps25361;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 365028 367617 . - 0 ID=Thaps25361;Parent=Thaps25361;rank=1 chr18 . exon 365028 367617 . - . ID=Thaps25361.1;Parent=Thaps25361;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 359248 359823 . - . ID=Thaps38025;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLS0];external_name=Thaps38025;logic_name=jgi_thaps3 chr18 ensembl transcript 359248 359823 . - . ID=Thaps38025;Parent=Thaps38025;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 359248 359823 . - 0 ID=Thaps38025;Parent=Thaps38025;rank=1 chr18 . exon 359248 359823 . - . ID=Thaps38025.1;Parent=Thaps38025;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 362829 363842 . - . ID=Thaps38085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLS2];external_name=TPT4;logic_name=jgi_thaps3 chr18 ensembl transcript 362829 363842 . - . ID=Thaps38085;Parent=Thaps38085;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 362829 363842 . - 0 ID=Thaps38085;Parent=Thaps38085;rank=1 chr18 . exon 362829 363842 . - . ID=Thaps38085.1;Parent=Thaps38085;constitutive=1;rank=1 chr18 . exon 369644 369883 . + . ID=Thaps10881.2;Parent=Thaps10881;constitutive=1;rank=2 chr18 . exon 369959 370883 . + . ID=Thaps10881.3;Parent=Thaps10881;constitutive=1;ensembl_end_phase=1;rank=3 chr18 ensembl protein_coding_gene 371300 371860 . - . ID=Thaps10882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLS5];external_name=Thaps10882;logic_name=jgi_thaps3 chr18 ensembl transcript 371300 371860 . - . ID=Thaps10882;Parent=Thaps10882;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 371300 371860 . - 0 ID=Thaps10882;Parent=Thaps10882;rank=1 chr18 . exon 371300 371860 . - . ID=Thaps10882.1;Parent=Thaps10882;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 375904 378350 . + . ID=Thaps10885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLS8];external_name=Thaps10885;logic_name=jgi_thaps3 chr18 ensembl transcript 375904 378350 . + . ID=Thaps10885;Parent=Thaps10885;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 375904 377889 . + 0 ID=Thaps10885;Parent=Thaps10885;rank=1 chr18 . exon 375904 377889 . + . ID=Thaps10885.1;Parent=Thaps10885;constitutive=1;rank=1 chr18 . CDS 377964 378350 . + 0 ID=Thaps10885;Parent=Thaps10885;rank=2 chr18 . exon 377964 378350 . + . ID=Thaps10885.2;Parent=Thaps10885;constitutive=1;rank=2 chr18 ensembl protein_coding_gene 378426 380021 . - . ID=Thaps10886;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLS9];external_name=Thaps10886;logic_name=jgi_thaps3 chr18 ensembl transcript 378426 380021 . - . ID=Thaps10886;Parent=Thaps10886;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 378426 380021 . - 0 ID=Thaps10886;Parent=Thaps10886;rank=1 chr18 . exon 378426 380021 . - . ID=Thaps10886.1;Parent=Thaps10886;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 372318 373199 . - . ID=Thaps16737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLS6];external_name=Thaps16737;logic_name=jgi_thaps3 chr18 ensembl transcript 372318 373199 . - . ID=Thaps16737;Parent=Thaps16737;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 372318 373199 . - 0 ID=Thaps16737;Parent=Thaps16737;rank=1 chr18 . exon 372318 373199 . - . ID=Thaps16737.1;Parent=Thaps16737;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 374734 375680 . - . ID=Thaps30380;biotype=protein_coding;description=Triosephosphate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B5YLS7];external_name=TPI2;logic_name=jgi_thaps3 chr18 ensembl transcript 374734 375680 . - . ID=Thaps30380;Parent=Thaps30380;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 374734 375002 . - 0 ID=Thaps30380;Parent=Thaps30380;rank=2 chr18 . exon 374734 375002 . - . ID=Thaps30380.2;Parent=Thaps30380;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 375119 375680 . - 0 ID=Thaps30380;Parent=Thaps30380;rank=1 chr18 . exon 375119 375680 . - . ID=Thaps30380.1;Parent=Thaps30380;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . repeat_region 385759 385922 . + . description=Gypsy1LTR_TP chr18 . repeat_region 386045 386153 . - . description=Harbinger2_TP chr18 . repeat_region 387438 387910 . + . description=Harbinger2_TP chr18 ensembl protein_coding_gene 380567 381562 . + . ID=Thaps15539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLT0];external_name=Thaps15539;logic_name=jgi_thaps3 chr18 ensembl transcript 380567 381562 . + . ID=Thaps15539;Parent=Thaps15539;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 380567 381424 . + 0 ID=Thaps15539;Parent=Thaps15539;rank=1 chr18 . exon 380567 381424 . + . ID=Thaps15539.1;Parent=Thaps15539;constitutive=1;rank=1 chr18 . CDS 381455 381562 . + 0 ID=Thaps15539;Parent=Thaps15539;rank=2 chr18 . exon 381455 381562 . + . ID=Thaps15539.2;Parent=Thaps15539;constitutive=1;rank=2 chr18 ensembl protein_coding_gene 382411 385710 . - . ID=Thaps25363;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLT1];external_name=Thaps25363;logic_name=jgi_thaps3 chr18 ensembl transcript 382411 385710 . - . ID=Thaps25363;Parent=Thaps25363;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 382411 383186 . - 0 ID=Thaps25363;Parent=Thaps25363;rank=2 chr18 . exon 382411 383186 . - . ID=Thaps25363.2;Parent=Thaps25363;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 383271 385710 . - 0 ID=Thaps25363;Parent=Thaps25363;rank=1 chr18 . exon 383271 385710 . - . ID=Thaps25363.1;Parent=Thaps25363;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . repeat_region 390571 390620 . ? . description=dust chr18 . repeat_region 390572 390620 . ? . description=trf chr18 ensembl protein_coding_gene 389098 390363 . + . ID=Thaps10889;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLT2];external_name=Thaps10889;logic_name=jgi_thaps3 chr18 ensembl transcript 389098 390363 . + . ID=Thaps10889;Parent=Thaps10889;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 389098 390363 . + 0 ID=Thaps10889;Parent=Thaps10889;rank=1 chr18 . exon 389098 390363 . + . ID=Thaps10889.1;Parent=Thaps10889;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 394936 395769 . + . ID=Thaps10892;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLT5];external_name=Thaps10892;logic_name=jgi_thaps3 chr18 ensembl transcript 394936 395769 . + . ID=Thaps10892;Parent=Thaps10892;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 394936 395769 . + 0 ID=Thaps10892;Parent=Thaps10892;rank=1 chr18 . exon 394936 395769 . + . ID=Thaps10892.1;Parent=Thaps10892;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 396140 396550 . - . ID=Thaps10893;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLT6];external_name=Thaps10893;logic_name=jgi_thaps3 chr18 ensembl transcript 396140 396550 . - . ID=Thaps10893;Parent=Thaps10893;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 396140 396550 . - 0 ID=Thaps10893;Parent=Thaps10893;rank=1 chr18 . exon 396140 396550 . - . ID=Thaps10893.1;Parent=Thaps10893;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 397318 398637 . + . ID=Thaps10894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLT7];external_name=Thaps10894;logic_name=jgi_thaps3 chr18 ensembl transcript 397318 398637 . + . ID=Thaps10894;Parent=Thaps10894;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 397318 398637 . + 0 ID=Thaps10894;Parent=Thaps10894;rank=1 chr18 . exon 397318 398637 . + . ID=Thaps10894.1;Parent=Thaps10894;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 392526 394682 . - . ID=Thaps25364;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLT4];external_name=Thaps25364;logic_name=jgi_thaps3 chr18 ensembl transcript 392526 394682 . - . ID=Thaps25364;Parent=Thaps25364;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 392526 394682 . - 0 ID=Thaps25364;Parent=Thaps25364;rank=1 chr18 . exon 392526 394682 . - . ID=Thaps25364.1;Parent=Thaps25364;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 390724 391983 . - . ID=Thaps38157;biotype=protein_coding;description=GDP-L-fucose transporter [Source:UniProtKB/TrEMBL%3BAcc:B5YLT3];external_name=FCT1;logic_name=jgi_thaps3 chr18 ensembl transcript 390724 391983 . - . ID=Thaps38157;Parent=Thaps38157;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 390724 390825 . - 0 ID=Thaps38157;Parent=Thaps38157;rank=4 chr18 . exon 390724 390825 . - . ID=Thaps38157.4;Parent=Thaps38157;constitutive=1;rank=4 chr18 . CDS 390899 391551 . - 0 ID=Thaps38157;Parent=Thaps38157;rank=3 chr18 . exon 390899 391551 . - . ID=Thaps38157.3;Parent=Thaps38157;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 391633 391704 . - 0 ID=Thaps38157;Parent=Thaps38157;rank=2 chr18 . exon 391633 391704 . - . ID=Thaps38157.2;Parent=Thaps38157;constitutive=1;rank=2 chr18 . CDS 391899 391983 . - 0 ID=Thaps38157;Parent=Thaps38157;rank=1 chr18 . exon 391899 391983 . - . ID=Thaps38157.1;Parent=Thaps38157;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 399025 400906 . + . ID=Thaps10895;biotype=protein_coding;description=NADP-dependent ferredoxin reductase and adrenodoxin reductase%2C fprA-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLT8];external_name=Thaps10895;logic_name=jgi_thaps3 chr18 ensembl transcript 399025 400906 . + . ID=Thaps10895;Parent=Thaps10895;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 399025 400035 . + 0 ID=Thaps10895;Parent=Thaps10895;rank=1 chr18 . exon 399025 400035 . + . ID=Thaps10895.1;Parent=Thaps10895;constitutive=1;rank=1 chr18 . CDS 400112 400906 . + 0 ID=Thaps10895;Parent=Thaps10895;rank=2 chr18 . exon 400112 400906 . + . ID=Thaps10895.2;Parent=Thaps10895;constitutive=1;rank=2 chr18 ensembl protein_coding_gene 406299 407267 . + . ID=Thaps10898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLU1];external_name=Thaps10898;logic_name=jgi_thaps3 chr18 ensembl transcript 406299 407267 . + . ID=Thaps10898;Parent=Thaps10898;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 406299 407267 . + 0 ID=Thaps10898;Parent=Thaps10898;rank=1 chr18 . exon 406299 407267 . + . ID=Thaps10898.1;Parent=Thaps10898;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 407697 408176 . - . ID=Thaps10899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLU2];external_name=Thaps10899;logic_name=jgi_thaps3 chr18 ensembl transcript 407697 408176 . - . ID=Thaps10899;Parent=Thaps10899;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 407697 407962 . - 0 ID=Thaps10899;Parent=Thaps10899;rank=2 chr18 . exon 407697 407962 . - . ID=Thaps10899.2;Parent=Thaps10899;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 408050 408176 . - 0 ID=Thaps10899;Parent=Thaps10899;rank=1 chr18 . exon 408050 408176 . - . ID=Thaps10899.1;Parent=Thaps10899;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 403352 404791 . + . ID=Thaps25365;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLT9];external_name=Thaps25365;logic_name=jgi_thaps3 chr18 ensembl transcript 403352 404791 . + . ID=Thaps25365;Parent=Thaps25365;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 403352 404791 . + 0 ID=Thaps25365;Parent=Thaps25365;rank=1 chr18 . exon 403352 404791 . + . ID=Thaps25365.1;Parent=Thaps25365;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 405592 405882 . - . ID=Thaps38030;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLU0];external_name=Thaps38030;logic_name=jgi_thaps3 chr18 ensembl transcript 405592 405882 . - . ID=Thaps38030;Parent=Thaps38030;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 405592 405882 . - 0 ID=Thaps38030;Parent=Thaps38030;rank=1 chr18 . exon 405592 405882 . - . ID=Thaps38030.1;Parent=Thaps38030;constitutive=1;rank=1 chr18 . repeat_region 409514 409521 . ? . description=dust chr18 . repeat_region 410497 410518 . ? . description=trf chr18 ensembl protein_coding_gene 413479 414843 . - . ID=Thaps10903;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLU6];external_name=Thaps10903;logic_name=jgi_thaps3 chr18 ensembl transcript 413479 414843 . - . ID=Thaps10903;Parent=Thaps10903;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 413479 414843 . - 0 ID=Thaps10903;Parent=Thaps10903;rank=1 chr18 . exon 413479 414843 . - . ID=Thaps10903.1;Parent=Thaps10903;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 415198 416492 . + . ID=Thaps10904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLU7];external_name=Thaps10904;logic_name=jgi_thaps3 chr18 ensembl transcript 415198 416492 . + . ID=Thaps10904;Parent=Thaps10904;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 415198 415817 . + 0 ID=Thaps10904;Parent=Thaps10904;rank=1 chr18 . exon 415198 415817 . + . ID=Thaps10904.1;Parent=Thaps10904;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 415940 416492 . + 0 ID=Thaps10904;Parent=Thaps10904;rank=2 chr18 . exon 415940 416492 . + . ID=Thaps10904.2;Parent=Thaps10904;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 416979 417686 . + . ID=Thaps10905;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLU8];external_name=Thaps10905;logic_name=jgi_thaps3 chr18 ensembl transcript 416979 417686 . + . ID=Thaps10905;Parent=Thaps10905;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 416979 417686 . + 0 ID=Thaps10905;Parent=Thaps10905;rank=1 chr18 . exon 416979 417686 . + . ID=Thaps10905.1;Parent=Thaps10905;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 418246 418767 . - . ID=Thaps10906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLU9];external_name=Thaps10906;logic_name=jgi_thaps3 chr18 ensembl transcript 418246 418767 . - . ID=Thaps10906;Parent=Thaps10906;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 418246 418431 . - 0 ID=Thaps10906;Parent=Thaps10906;rank=2 chr18 . exon 418246 418431 . - . ID=Thaps10906.2;Parent=Thaps10906;constitutive=1;rank=2 chr18 . CDS 418558 418767 . - 0 ID=Thaps10906;Parent=Thaps10906;rank=1 chr18 ensembl protein_coding_gene 409763 411132 . - . ID=Thaps25367;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLU4];external_name=Thaps25367;logic_name=jgi_thaps3 chr18 ensembl transcript 409763 411132 . - . ID=Thaps25367;Parent=Thaps25367;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 409763 410628 . - 0 ID=Thaps25367;Parent=Thaps25367;rank=3 chr18 . exon 409763 410628 . - . ID=Thaps25367.3;Parent=Thaps25367;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 410708 410957 . - 0 ID=Thaps25367;Parent=Thaps25367;rank=2 chr18 . exon 410708 410957 . - . ID=Thaps25367.2;Parent=Thaps25367;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 411043 411132 . - 0 ID=Thaps25367;Parent=Thaps25367;rank=1 chr18 . exon 411043 411132 . - . ID=Thaps25367.1;Parent=Thaps25367;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 408817 409464 . - . ID=Thaps30385;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein-LI818 clade [Source:UniProtKB/TrEMBL%3BAcc:B5YLU3];external_name=LHCX6_1;logic_name=jgi_thaps3 chr18 ensembl transcript 408817 409464 . - . ID=Thaps30385;Parent=Thaps30385;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 408817 409317 . - 0 ID=Thaps30385;Parent=Thaps30385;rank=2 chr18 . exon 408817 409317 . - . ID=Thaps30385.2;Parent=Thaps30385;constitutive=1;rank=2 chr18 . CDS 409366 409464 . - 0 ID=Thaps30385;Parent=Thaps30385;rank=1 chr18 . exon 409366 409464 . - . ID=Thaps30385.1;Parent=Thaps30385;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 412251 413186 . + . ID=Thaps38071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLU5];external_name=Thaps38071;logic_name=jgi_thaps3 chr18 ensembl transcript 412251 413186 . + . ID=Thaps38071;Parent=Thaps38071;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 412251 412616 . + 0 ID=Thaps38071;Parent=Thaps38071;rank=1 chr18 . exon 412251 412616 . + . ID=Thaps38071.1;Parent=Thaps38071;constitutive=1;rank=1 chr18 . CDS 412725 413186 . + 0 ID=Thaps38071;Parent=Thaps38071;rank=2 chr18 . exon 412725 413186 . + . ID=Thaps38071.2;Parent=Thaps38071;constitutive=1;rank=2 chr18 . exon 418558 418767 . - . ID=Thaps10906.1;Parent=Thaps10906;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 419309 420130 . - . ID=Thaps10907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV0];external_name=Thaps10907;logic_name=jgi_thaps3 chr18 ensembl transcript 419309 420130 . - . ID=Thaps10907;Parent=Thaps10907;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 419309 420130 . - 0 ID=Thaps10907;Parent=Thaps10907;rank=1 chr18 . exon 419309 420130 . - . ID=Thaps10907.1;Parent=Thaps10907;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 427243 430224 . + . ID=Thaps12594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV4];external_name=Thaps12594;logic_name=jgi_thaps3 chr18 ensembl transcript 427243 430224 . + . ID=Thaps12594;Parent=Thaps12594;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 427243 427458 . + 0 ID=Thaps12594;Parent=Thaps12594;rank=1 chr18 . exon 427243 427458 . + . ID=Thaps12594.1;Parent=Thaps12594;constitutive=1;rank=1 chr18 . CDS 427588 427695 . + 0 ID=Thaps12594;Parent=Thaps12594;rank=2 chr18 . exon 427588 427695 . + . ID=Thaps12594.2;Parent=Thaps12594;constitutive=1;rank=2 chr18 . CDS 427794 428700 . + 0 ID=Thaps12594;Parent=Thaps12594;rank=3 chr18 . exon 427794 428700 . + . ID=Thaps12594.3;Parent=Thaps12594;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 428788 429544 . + 0 ID=Thaps12594;Parent=Thaps12594;rank=4 chr18 . CDS 429627 430224 . + 0 ID=Thaps12594;Parent=Thaps12594;rank=5 chr18 ensembl protein_coding_gene 422648 423707 . + . ID=Thaps15961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV2];external_name=Thaps15961;logic_name=jgi_thaps3 chr18 ensembl transcript 422648 423707 . + . ID=Thaps15961;Parent=Thaps15961;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 422648 422820 . + 0 ID=Thaps15961;Parent=Thaps15961;rank=1 chr18 . exon 422648 422820 . + . ID=Thaps15961.1;Parent=Thaps15961;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 422912 423375 . + 0 ID=Thaps15961;Parent=Thaps15961;rank=2 chr18 . exon 422912 423375 . + . ID=Thaps15961.2;Parent=Thaps15961;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 423451 423707 . + 0 ID=Thaps15961;Parent=Thaps15961;rank=3 chr18 . exon 423451 423707 . + . ID=Thaps15961.3;Parent=Thaps15961;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 421021 422037 . - . ID=Thaps25369;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV1];external_name=Thaps25369;logic_name=jgi_thaps3 chr18 ensembl transcript 421021 422037 . - . ID=Thaps25369;Parent=Thaps25369;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 421021 422037 . - 0 ID=Thaps25369;Parent=Thaps25369;rank=1 chr18 . exon 421021 422037 . - . ID=Thaps25369.1;Parent=Thaps25369;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 423880 425002 . - . ID=Thaps38060;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV3];external_name=Thaps38060;logic_name=jgi_thaps3 chr18 ensembl transcript 423880 425002 . - . ID=Thaps38060;Parent=Thaps38060;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 423880 424873 . - 0 ID=Thaps38060;Parent=Thaps38060;rank=2 chr18 . exon 423880 424873 . - . ID=Thaps38060.2;Parent=Thaps38060;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 424941 425002 . - 0 ID=Thaps38060;Parent=Thaps38060;rank=1 chr18 . exon 424941 425002 . - . ID=Thaps38060.1;Parent=Thaps38060;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . exon 428788 429544 . + . ID=Thaps12594.4;Parent=Thaps12594;constitutive=1;ensembl_end_phase=1;rank=4 chr18 . exon 429627 430224 . + . ID=Thaps12594.5;Parent=Thaps12594;constitutive=1;ensembl_end_phase=1;rank=5 chr18 ensembl protein_coding_gene 430923 432270 . + . ID=Thaps25372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV5];external_name=Thaps25372;logic_name=jgi_thaps3 chr18 ensembl transcript 430923 432270 . + . ID=Thaps25372;Parent=Thaps25372;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 430923 431732 . + 0 ID=Thaps25372;Parent=Thaps25372;rank=1 chr18 . exon 430923 431732 . + . ID=Thaps25372.1;Parent=Thaps25372;constitutive=1;rank=1 chr18 . CDS 431816 431976 . + 0 ID=Thaps25372;Parent=Thaps25372;rank=2 chr18 . exon 431816 431976 . + . ID=Thaps25372.2;Parent=Thaps25372;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 432075 432270 . + 0 ID=Thaps25372;Parent=Thaps25372;rank=3 chr18 . exon 432075 432270 . + . ID=Thaps25372.3;Parent=Thaps25372;constitutive=1;ensembl_end_phase=1;rank=3 chr18 ensembl protein_coding_gene 433983 438347 . + . ID=Thaps25373;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV6];external_name=Thaps25373;logic_name=jgi_thaps3 chr18 ensembl transcript 433983 438347 . + . ID=Thaps25373;Parent=Thaps25373;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 433983 438347 . + 0 ID=Thaps25373;Parent=Thaps25373;rank=1 chr18 . exon 433983 438347 . + . ID=Thaps25373.1;Parent=Thaps25373;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 442510 443768 . + . ID=Thaps10916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV9];external_name=Thaps10916;logic_name=jgi_thaps3 chr18 ensembl transcript 442510 443768 . + . ID=Thaps10916;Parent=Thaps10916;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 442510 443119 . + 0 ID=Thaps10916;Parent=Thaps10916;rank=1 chr18 . exon 442510 443119 . + . ID=Thaps10916.1;Parent=Thaps10916;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 443144 443457 . + 0 ID=Thaps10916;Parent=Thaps10916;rank=2 chr18 . exon 443144 443457 . + . ID=Thaps10916.2;Parent=Thaps10916;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 443549 443657 . + 0 ID=Thaps10916;Parent=Thaps10916;rank=3 chr18 . exon 443549 443657 . + . ID=Thaps10916.3;Parent=Thaps10916;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 443743 443768 . + 0 ID=Thaps10916;Parent=Thaps10916;rank=4 chr18 . exon 443743 443768 . + . ID=Thaps10916.4;Parent=Thaps10916;constitutive=1;ensembl_end_phase=2;rank=4 chr18 ensembl protein_coding_gene 443926 445026 . - . ID=Thaps10917;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW0];external_name=Thaps10917;logic_name=jgi_thaps3 chr18 ensembl transcript 443926 445026 . - . ID=Thaps10917;Parent=Thaps10917;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 443926 445026 . - 0 ID=Thaps10917;Parent=Thaps10917;rank=1 chr18 . exon 443926 445026 . - . ID=Thaps10917.1;Parent=Thaps10917;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 445925 446767 . - . ID=Thaps10918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW1];external_name=Thaps10918;logic_name=jgi_thaps3 chr18 ensembl transcript 445925 446767 . - . ID=Thaps10918;Parent=Thaps10918;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 445925 446034 . - 0 ID=Thaps10918;Parent=Thaps10918;rank=2 chr18 . exon 445925 446034 . - . ID=Thaps10918.2;Parent=Thaps10918;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 446260 446767 . - 0 ID=Thaps10918;Parent=Thaps10918;rank=1 chr18 . exon 446260 446767 . - . ID=Thaps10918.1;Parent=Thaps10918;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 446952 450193 . + . ID=Thaps10919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW2];external_name=Thaps10919;logic_name=jgi_thaps3 chr18 ensembl transcript 446952 450193 . + . ID=Thaps10919;Parent=Thaps10919;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 446952 447014 . + 0 ID=Thaps10919;Parent=Thaps10919;rank=1 chr18 . exon 446952 447014 . + . ID=Thaps10919.1;Parent=Thaps10919;constitutive=1;rank=1 chr18 . CDS 447096 448040 . + 0 ID=Thaps10919;Parent=Thaps10919;rank=2 chr18 . exon 447096 448040 . + . ID=Thaps10919.2;Parent=Thaps10919;constitutive=1;rank=2 chr18 . CDS 448117 450039 . + 0 ID=Thaps10919;Parent=Thaps10919;rank=3 chr18 . exon 448117 450039 . + . ID=Thaps10919.3;Parent=Thaps10919;constitutive=1;rank=3 chr18 . CDS 450122 450193 . + 0 ID=Thaps10919;Parent=Thaps10919;rank=4 chr18 ensembl protein_coding_gene 438846 440498 . + . ID=Thaps25374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV7];external_name=Thaps25374;logic_name=jgi_thaps3 chr18 ensembl transcript 438846 440498 . + . ID=Thaps25374;Parent=Thaps25374;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 438846 440498 . + 0 ID=Thaps25374;Parent=Thaps25374;rank=1 chr18 . exon 438846 440498 . + . ID=Thaps25374.1;Parent=Thaps25374;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 440606 441670 . - . ID=Thaps25375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLV8];external_name=Thaps25375;logic_name=jgi_thaps3 chr18 ensembl transcript 440606 441670 . - . ID=Thaps25375;Parent=Thaps25375;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 440606 441670 . - 0 ID=Thaps25375;Parent=Thaps25375;rank=1 chr18 . exon 440606 441670 . - . ID=Thaps25375.1;Parent=Thaps25375;constitutive=1;rank=1 chr18 . repeat_region 456148 456189 . ? . description=trf chr18 . repeat_region 457978 457997 . ? . description=trf chr18 . repeat_region 457978 458013 . ? . description=dust chr18 . exon 450122 450193 . + . ID=Thaps10919.4;Parent=Thaps10919;constitutive=1;rank=4 chr18 ensembl protein_coding_gene 453200 455161 . + . ID=Thaps25377;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW4];external_name=Thaps25377;logic_name=jgi_thaps3 chr18 ensembl transcript 453200 455161 . + . ID=Thaps25377;Parent=Thaps25377;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 453200 453323 . + 0 ID=Thaps25377;Parent=Thaps25377;rank=1 chr18 . exon 453200 453323 . + . ID=Thaps25377.1;Parent=Thaps25377;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 453470 453527 . + 0 ID=Thaps25377;Parent=Thaps25377;rank=2 chr18 . exon 453470 453527 . + . ID=Thaps25377.2;Parent=Thaps25377;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 453605 454022 . + 0 ID=Thaps25377;Parent=Thaps25377;rank=3 chr18 . exon 453605 454022 . + . ID=Thaps25377.3;Parent=Thaps25377;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 454103 455161 . + 0 ID=Thaps25377;Parent=Thaps25377;rank=4 chr18 . exon 454103 455161 . + . ID=Thaps25377.4;Parent=Thaps25377;constitutive=1;rank=4 chr18 ensembl protein_coding_gene 455308 457955 . - . ID=Thaps25378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW5];external_name=Thaps25378;logic_name=jgi_thaps3 chr18 ensembl transcript 455308 457955 . - . ID=Thaps25378;Parent=Thaps25378;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 455308 456112 . - 0 ID=Thaps25378;Parent=Thaps25378;rank=3 chr18 . exon 455308 456112 . - . ID=Thaps25378.3;Parent=Thaps25378;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 456194 457041 . - 0 ID=Thaps25378;Parent=Thaps25378;rank=2 chr18 . exon 456194 457041 . - . ID=Thaps25378.2;Parent=Thaps25378;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 457647 457955 . - 0 ID=Thaps25378;Parent=Thaps25378;rank=1 chr18 . exon 457647 457955 . - . ID=Thaps25378.1;Parent=Thaps25378;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 450849 451193 . - . ID=Thaps38164;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW3];external_name=Thaps38164;logic_name=jgi_thaps3 chr18 ensembl transcript 450849 451193 . - . ID=Thaps38164;Parent=Thaps38164;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 450849 451193 . - 0 ID=Thaps38164;Parent=Thaps38164;rank=1 chr18 . exon 450849 451193 . - . ID=Thaps38164.1;Parent=Thaps38164;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 464392 465854 . + . ID=Thaps10925;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW8];external_name=Thaps10925;logic_name=jgi_thaps3 chr18 ensembl transcript 464392 465854 . + . ID=Thaps10925;Parent=Thaps10925;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 464392 465792 . + 0 ID=Thaps10925;Parent=Thaps10925;rank=1 chr18 . exon 464392 465792 . + . ID=Thaps10925.1;Parent=Thaps10925;constitutive=1;rank=1 chr18 . CDS 465819 465854 . + 0 ID=Thaps10925;Parent=Thaps10925;rank=2 chr18 . exon 465819 465854 . + . ID=Thaps10925.2;Parent=Thaps10925;constitutive=1;rank=2 chr18 ensembl protein_coding_gene 465957 468668 . - . ID=Thaps25380;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW9];external_name=Thaps25380;logic_name=jgi_thaps3 chr18 ensembl transcript 465957 468668 . - . ID=Thaps25380;Parent=Thaps25380;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 465957 468668 . - 0 ID=Thaps25380;Parent=Thaps25380;rank=1 chr18 . exon 465957 468668 . - . ID=Thaps25380.1;Parent=Thaps25380;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 462664 463442 . + . ID=Thaps264523;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW7];external_name=Thaps264523;logic_name=jgi_thaps3 chr18 ensembl transcript 462664 463442 . + . ID=Thaps264523;Parent=Thaps264523;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 462664 462780 . + 0 ID=Thaps264523;Parent=Thaps264523;rank=1 chr18 . exon 462664 462780 . + . ID=Thaps264523.1;Parent=Thaps264523;constitutive=1;rank=1 chr18 . CDS 462851 463442 . + 0 ID=Thaps264523;Parent=Thaps264523;rank=2 chr18 . exon 462851 463442 . + . ID=Thaps264523.2;Parent=Thaps264523;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 458656 460065 . + . ID=Thaps269948;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLW6];external_name=Thaps269948;logic_name=jgi_thaps3 chr18 ensembl transcript 458656 460065 . + . ID=Thaps269948;Parent=Thaps269948;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 458656 460065 . + 0 ID=Thaps269948;Parent=Thaps269948;rank=1 chr18 . exon 458656 460065 . + . ID=Thaps269948.1;Parent=Thaps269948;constitutive=1;rank=1 chr18 . repeat_region 474308 474315 . ? . description=dust chr18 ensembl protein_coding_gene 468963 469655 . - . ID=Thaps10927;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX0];external_name=Thaps10927;logic_name=jgi_thaps3 chr18 ensembl transcript 468963 469655 . - . ID=Thaps10927;Parent=Thaps10927;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 468963 469655 . - 0 ID=Thaps10927;Parent=Thaps10927;rank=1 chr18 . exon 468963 469655 . - . ID=Thaps10927.1;Parent=Thaps10927;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 471073 471928 . + . ID=Thaps10928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX1];external_name=Thaps10928;logic_name=jgi_thaps3 chr18 ensembl transcript 471073 471928 . + . ID=Thaps10928;Parent=Thaps10928;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 471073 471163 . + 0 ID=Thaps10928;Parent=Thaps10928;rank=1 chr18 . exon 471073 471163 . + . ID=Thaps10928.1;Parent=Thaps10928;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 471185 471288 . + 0 ID=Thaps10928;Parent=Thaps10928;rank=2 chr18 . exon 471185 471288 . + . ID=Thaps10928.2;Parent=Thaps10928;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 471369 471575 . + 0 ID=Thaps10928;Parent=Thaps10928;rank=3 chr18 . exon 471369 471575 . + . ID=Thaps10928.3;Parent=Thaps10928;constitutive=1;rank=3 chr18 . CDS 471629 471928 . + 0 ID=Thaps10928;Parent=Thaps10928;rank=4 chr18 . exon 471629 471928 . + . ID=Thaps10928.4;Parent=Thaps10928;constitutive=1;rank=4 chr18 ensembl protein_coding_gene 472355 473881 . + . ID=Thaps10929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX2];external_name=Thaps10929;logic_name=jgi_thaps3 chr18 ensembl transcript 472355 473881 . + . ID=Thaps10929;Parent=Thaps10929;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 472355 473881 . + 0 ID=Thaps10929;Parent=Thaps10929;rank=1 chr18 . exon 472355 473881 . + . ID=Thaps10929.1;Parent=Thaps10929;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 474145 475458 . - . ID=Thaps25381;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX3];external_name=CUE14;logic_name=jgi_thaps3 chr18 ensembl transcript 474145 475458 . - . ID=Thaps25381;Parent=Thaps25381;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 474145 475458 . - 0 ID=Thaps25381;Parent=Thaps25381;rank=1 chr18 . exon 474145 475458 . - . ID=Thaps25381.1;Parent=Thaps25381;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 476670 479078 . + . ID=Thaps25382;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX4];external_name=Thaps25382;logic_name=jgi_thaps3 chr18 ensembl transcript 476670 479078 . + . ID=Thaps25382;Parent=Thaps25382;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 476670 479078 . + 0 ID=Thaps25382;Parent=Thaps25382;rank=1 chr18 . exon 476670 479078 . + . ID=Thaps25382.1;Parent=Thaps25382;constitutive=1;rank=1 chr18 . repeat_region 483927 483953 . ? . description=trf chr18 . repeat_region 487090 487109 . ? . description=trf chr18 . biological_region 487206 487212 0.999 + . logic_name=eponine chr18 ensembl protein_coding_gene 482870 484961 . - . ID=Thaps10934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX6];external_name=Thaps10934;logic_name=jgi_thaps3 chr18 ensembl transcript 482870 484961 . - . ID=Thaps10934;Parent=Thaps10934;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 482870 484668 . - 0 ID=Thaps10934;Parent=Thaps10934;rank=2 chr18 . exon 482870 484668 . - . ID=Thaps10934.2;Parent=Thaps10934;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 484793 484961 . - 0 ID=Thaps10934;Parent=Thaps10934;rank=1 chr18 . exon 484793 484961 . - . ID=Thaps10934.1;Parent=Thaps10934;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 485269 487067 . - . ID=Thaps10935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX7];external_name=Thaps10935;logic_name=jgi_thaps3 chr18 ensembl transcript 485269 487067 . - . ID=Thaps10935;Parent=Thaps10935;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 485269 486291 . - 0 ID=Thaps10935;Parent=Thaps10935;rank=3 chr18 . exon 485269 486291 . - . ID=Thaps10935.3;Parent=Thaps10935;constitutive=1;rank=3 chr18 . CDS 486379 486877 . - 0 ID=Thaps10935;Parent=Thaps10935;rank=2 chr18 . exon 486379 486877 . - . ID=Thaps10935.2;Parent=Thaps10935;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 486973 487067 . - 0 ID=Thaps10935;Parent=Thaps10935;rank=1 chr18 . exon 486973 487067 . - . ID=Thaps10935.1;Parent=Thaps10935;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 479421 482565 . + . ID=Thaps26041;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX5];external_name=Thaps26041;logic_name=jgi_thaps3 chr18 ensembl transcript 479421 482565 . + . ID=Thaps26041;Parent=Thaps26041;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 479421 479535 . + 0 ID=Thaps26041;Parent=Thaps26041;rank=1 chr18 . exon 479421 479535 . + . ID=Thaps26041.1;Parent=Thaps26041;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 479605 479756 . + 0 ID=Thaps26041;Parent=Thaps26041;rank=2 chr18 . exon 479605 479756 . + . ID=Thaps26041.2;Parent=Thaps26041;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 479846 479953 . + 0 ID=Thaps26041;Parent=Thaps26041;rank=3 chr18 . exon 479846 479953 . + . ID=Thaps26041.3;Parent=Thaps26041;constitutive=1;rank=3 chr18 . CDS 480033 481432 . + 0 ID=Thaps26041;Parent=Thaps26041;rank=4 chr18 . exon 480033 481432 . + . ID=Thaps26041.4;Parent=Thaps26041;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 481506 481538 . + 0 ID=Thaps26041;Parent=Thaps26041;rank=5 chr18 . exon 481506 481538 . + . ID=Thaps26041.5;Parent=Thaps26041;constitutive=1;rank=5 chr18 . CDS 481617 482565 . + 0 ID=Thaps26041;Parent=Thaps26041;rank=6 chr18 . exon 481617 482565 . + . ID=Thaps26041.6;Parent=Thaps26041;constitutive=1;ensembl_end_phase=1;rank=6 chr18 ensembl protein_coding_gene 487391 488574 . + . ID=Thaps269952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX8];external_name=Thaps269952;logic_name=jgi_thaps3 chr18 ensembl transcript 487391 488574 . + . ID=Thaps269952;Parent=Thaps269952;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 487391 487469 . + 0 ID=Thaps269952;Parent=Thaps269952;rank=1 chr18 . exon 487391 487469 . + . ID=Thaps269952.1;Parent=Thaps269952;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 487579 487700 . + 0 ID=Thaps269952;Parent=Thaps269952;rank=2 chr18 . exon 487579 487700 . + . ID=Thaps269952.2;Parent=Thaps269952;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 487786 488574 . + 0 ID=Thaps269952;Parent=Thaps269952;rank=3 chr18 . exon 487786 488574 . + . ID=Thaps269952.3;Parent=Thaps269952;constitutive=1;rank=3 chr18 . repeat_region 489813 489967 . - . description=Gypsy1ALTR_TP chr18 . repeat_region 490681 490688 . ? . description=dust chr18 ensembl protein_coding_gene 490062 490439 . + . ID=Thaps10936;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLX9];external_name=Thaps10936;logic_name=jgi_thaps3 chr18 ensembl transcript 490062 490439 . + . ID=Thaps10936;Parent=Thaps10936;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 490062 490439 . + 0 ID=Thaps10936;Parent=Thaps10936;rank=1 chr18 . exon 490062 490439 . + . ID=Thaps10936.1;Parent=Thaps10936;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 491031 492014 . - . ID=Thaps10937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLY0];external_name=Thaps10937;logic_name=jgi_thaps3 chr18 ensembl transcript 491031 492014 . - . ID=Thaps10937;Parent=Thaps10937;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 491031 492014 . - 0 ID=Thaps10937;Parent=Thaps10937;rank=1 chr18 . exon 491031 492014 . - . ID=Thaps10937.1;Parent=Thaps10937;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 492630 494893 . + . ID=Thaps10938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLY1];external_name=Thaps10938;logic_name=jgi_thaps3 chr18 ensembl transcript 492630 494893 . + . ID=Thaps10938;Parent=Thaps10938;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 492630 493504 . + 0 ID=Thaps10938;Parent=Thaps10938;rank=1 chr18 . exon 492630 493504 . + . ID=Thaps10938.1;Parent=Thaps10938;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 493676 493764 . + 0 ID=Thaps10938;Parent=Thaps10938;rank=2 chr18 . exon 493676 493764 . + . ID=Thaps10938.2;Parent=Thaps10938;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 493833 493939 . + 0 ID=Thaps10938;Parent=Thaps10938;rank=3 chr18 . exon 493833 493939 . + . ID=Thaps10938.3;Parent=Thaps10938;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 494066 494708 . + 0 ID=Thaps10938;Parent=Thaps10938;rank=4 chr18 . exon 494066 494708 . + . ID=Thaps10938.4;Parent=Thaps10938;constitutive=1;ensembl_end_phase=1;rank=4 chr18 . CDS 494868 494893 . + 0 ID=Thaps10938;Parent=Thaps10938;rank=5 chr18 . exon 494868 494893 . + . ID=Thaps10938.5;Parent=Thaps10938;constitutive=1;ensembl_end_phase=2;rank=5 chr18 ensembl protein_coding_gene 497710 499310 . + . ID=Thaps10940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLY3];external_name=Thaps10940;logic_name=jgi_thaps3 chr18 ensembl transcript 497710 499310 . + . ID=Thaps10940;Parent=Thaps10940;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 497710 497860 . + 0 ID=Thaps10940;Parent=Thaps10940;rank=1 chr18 . exon 497710 497860 . + . ID=Thaps10940.1;Parent=Thaps10940;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 497923 499310 . + 0 ID=Thaps10940;Parent=Thaps10940;rank=2 chr18 . exon 497923 499310 . + . ID=Thaps10940.2;Parent=Thaps10940;constitutive=1;ensembl_end_phase=2;rank=2 chr18 ensembl protein_coding_gene 495779 497555 . + . ID=Thaps38066;biotype=protein_coding;description=Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B5YLY2];external_name=ALD2;logic_name=jgi_thaps3 chr18 ensembl transcript 495779 497555 . + . ID=Thaps38066;Parent=Thaps38066;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 495779 496099 . + 0 ID=Thaps38066;Parent=Thaps38066;rank=1 chr18 . exon 495779 496099 . + . ID=Thaps38066.1;Parent=Thaps38066;constitutive=1;rank=1 chr18 . CDS 496263 497555 . + 0 ID=Thaps38066;Parent=Thaps38066;rank=2 chr18 . exon 496263 497555 . + . ID=Thaps38066.2;Parent=Thaps38066;constitutive=1;rank=2 chr18 . repeat_region 498771 498811 . ? . description=trf chr18 . repeat_region 500356 500380 . ? . description=trf chr18 . repeat_region 504620 504669 . ? . description=trf chr18 . repeat_region 505256 505277 . ? . description=trf chr18 ensembl protein_coding_gene 501942 502313 . - . ID=Thaps10942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLY5];external_name=Thaps10942;logic_name=jgi_thaps3 chr18 ensembl transcript 501942 502313 . - . ID=Thaps10942;Parent=Thaps10942;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 501942 502313 . - 0 ID=Thaps10942;Parent=Thaps10942;rank=1 chr18 . exon 501942 502313 . - . ID=Thaps10942.1;Parent=Thaps10942;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 502462 504130 . - . ID=Thaps10943;biotype=protein_coding;description=1-deoxy-D-xylulose 5-phosphate reductoisomerase [Source:UniProtKB/TrEMBL%3BAcc:B5YLY6];external_name=DXR1;logic_name=jgi_thaps3 chr18 ensembl transcript 502462 504130 . - . ID=Thaps10943;Parent=Thaps10943;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 502462 502992 . - 0 ID=Thaps10943;Parent=Thaps10943;rank=2 chr18 . exon 502462 502992 . - . ID=Thaps10943.2;Parent=Thaps10943;constitutive=1;rank=2 chr18 . CDS 503213 504130 . - 0 ID=Thaps10943;Parent=Thaps10943;rank=1 chr18 . exon 503213 504130 . - . ID=Thaps10943.1;Parent=Thaps10943;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 507955 508764 . - . ID=Thaps10945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLY8];external_name=Thaps10945;logic_name=jgi_thaps3 chr18 ensembl transcript 507955 508764 . - . ID=Thaps10945;Parent=Thaps10945;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 507955 508764 . - 0 ID=Thaps10945;Parent=Thaps10945;rank=1 chr18 . exon 507955 508764 . - . ID=Thaps10945.1;Parent=Thaps10945;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 505867 507114 . + . ID=Thaps269953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLY7];external_name=Thaps269953;logic_name=jgi_thaps3 chr18 ensembl transcript 505867 507114 . + . ID=Thaps269953;Parent=Thaps269953;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 505867 506638 . + 0 ID=Thaps269953;Parent=Thaps269953;rank=1 chr18 . exon 505867 506638 . + . ID=Thaps269953.1;Parent=Thaps269953;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 506696 506713 . + 0 ID=Thaps269953;Parent=Thaps269953;rank=2 chr18 . exon 506696 506713 . + . ID=Thaps269953.2;Parent=Thaps269953;constitutive=1;rank=2 chr18 . CDS 506750 507114 . + 0 ID=Thaps269953;Parent=Thaps269953;rank=3 chr18 . exon 506750 507114 . + . ID=Thaps269953.3;Parent=Thaps269953;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 500562 501830 . + . ID=Thaps38111;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLY4];external_name=Thaps38111;logic_name=jgi_thaps3 chr18 ensembl transcript 500562 501830 . + . ID=Thaps38111;Parent=Thaps38111;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 500562 500691 . + 0 ID=Thaps38111;Parent=Thaps38111;rank=1 chr18 . exon 500562 500691 . + . ID=Thaps38111.1;Parent=Thaps38111;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 500785 500943 . + 0 ID=Thaps38111;Parent=Thaps38111;rank=2 chr18 . exon 500785 500943 . + . ID=Thaps38111.2;Parent=Thaps38111;constitutive=1;rank=2 chr18 . CDS 501148 501438 . + 0 ID=Thaps38111;Parent=Thaps38111;rank=3 chr18 . exon 501148 501438 . + . ID=Thaps38111.3;Parent=Thaps38111;constitutive=1;rank=3 chr18 . CDS 501496 501623 . + 0 ID=Thaps38111;Parent=Thaps38111;rank=4 chr18 . exon 501496 501623 . + . ID=Thaps38111.4;Parent=Thaps38111;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 501669 501830 . + 0 ID=Thaps38111;Parent=Thaps38111;rank=5 chr18 . exon 501669 501830 . + . ID=Thaps38111.5;Parent=Thaps38111;constitutive=1;rank=5 chr18 ensembl protein_coding_gene 509161 510732 . - . ID=Thaps10946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLY9];external_name=Thaps10946;logic_name=jgi_thaps3 chr18 ensembl transcript 509161 510732 . - . ID=Thaps10946;Parent=Thaps10946;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 509161 510732 . - 0 ID=Thaps10946;Parent=Thaps10946;rank=1 chr18 . exon 509161 510732 . - . ID=Thaps10946.1;Parent=Thaps10946;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 512354 513190 . + . ID=Thaps10947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ0];external_name=Thaps10947;logic_name=jgi_thaps3 chr18 ensembl transcript 512354 513190 . + . ID=Thaps10947;Parent=Thaps10947;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 512354 513190 . + 0 ID=Thaps10947;Parent=Thaps10947;rank=1 chr18 . exon 512354 513190 . + . ID=Thaps10947.1;Parent=Thaps10947;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 513697 515134 . - . ID=Thaps10948;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ1];external_name=Thaps10948;logic_name=jgi_thaps3 chr18 ensembl transcript 513697 515134 . - . ID=Thaps10948;Parent=Thaps10948;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 513697 513824 . - 0 ID=Thaps10948;Parent=Thaps10948;rank=4 chr18 . exon 513697 513824 . - . ID=Thaps10948.4;Parent=Thaps10948;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 513937 514278 . - 0 ID=Thaps10948;Parent=Thaps10948;rank=3 chr18 . exon 513937 514278 . - . ID=Thaps10948.3;Parent=Thaps10948;constitutive=1;rank=3 chr18 . CDS 514412 514595 . - 0 ID=Thaps10948;Parent=Thaps10948;rank=2 chr18 . exon 514412 514595 . - . ID=Thaps10948.2;Parent=Thaps10948;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 514688 515134 . - 0 ID=Thaps10948;Parent=Thaps10948;rank=1 chr18 . exon 514688 515134 . - . ID=Thaps10948.1;Parent=Thaps10948;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 515744 516433 . + . ID=Thaps25386;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ2];external_name=Thaps25386;logic_name=jgi_thaps3 chr18 ensembl transcript 515744 516433 . + . ID=Thaps25386;Parent=Thaps25386;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 515744 516433 . + 0 ID=Thaps25386;Parent=Thaps25386;rank=1 chr18 . exon 515744 516433 . + . ID=Thaps25386.1;Parent=Thaps25386;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 516777 518229 . - . ID=Thaps25387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ3];external_name=Thaps25387;logic_name=jgi_thaps3 chr18 ensembl transcript 516777 518229 . - . ID=Thaps25387;Parent=Thaps25387;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 516777 516827 . - 0 ID=Thaps25387;Parent=Thaps25387;rank=6 chr18 . exon 516777 516827 . - . ID=Thaps25387.6;Parent=Thaps25387;constitutive=1;rank=6 chr18 . CDS 516911 517006 . - 0 ID=Thaps25387;Parent=Thaps25387;rank=5 chr18 . exon 516911 517006 . - . ID=Thaps25387.5;Parent=Thaps25387;constitutive=1;rank=5 chr18 . CDS 517090 517223 . - 0 ID=Thaps25387;Parent=Thaps25387;rank=4 chr18 . exon 517090 517223 . - . ID=Thaps25387.4;Parent=Thaps25387;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 517317 517649 . - 0 ID=Thaps25387;Parent=Thaps25387;rank=3 chr18 . exon 517317 517649 . - . ID=Thaps25387.3;Parent=Thaps25387;constitutive=1;rank=3 chr18 . CDS 517737 518055 . - 0 ID=Thaps25387;Parent=Thaps25387;rank=2 chr18 . exon 517737 518055 . - . ID=Thaps25387.2;Parent=Thaps25387;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 518164 518229 . - 0 ID=Thaps25387;Parent=Thaps25387;rank=1 chr18 . exon 518164 518229 . - . ID=Thaps25387.1;Parent=Thaps25387;constitutive=1;rank=1 chr18 . repeat_region 518411 518418 . ? . description=dust chr18 . repeat_region 519235 519635 . ? . description=trf chr18 . repeat_region 522907 522969 . ? . description=trf chr18 . repeat_region 522910 522967 . ? . description=trf chr18 . repeat_region 523984 524015 . ? . description=trf chr18 . repeat_region 526234 526241 . ? . description=dust chr18 . repeat_region 526678 526754 . ? . description=trf chr18 . repeat_region 527128 527159 . ? . description=trf chr18 ensembl protein_coding_gene 519821 521488 . + . ID=Thaps10951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ4];external_name=Thaps10951;logic_name=jgi_thaps3 chr18 ensembl transcript 519821 521488 . + . ID=Thaps10951;Parent=Thaps10951;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 519821 520079 . + 0 ID=Thaps10951;Parent=Thaps10951;rank=1 chr18 . exon 519821 520079 . + . ID=Thaps10951.1;Parent=Thaps10951;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 520187 520341 . + 0 ID=Thaps10951;Parent=Thaps10951;rank=2 chr18 . exon 520187 520341 . + . ID=Thaps10951.2;Parent=Thaps10951;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 520413 520568 . + 0 ID=Thaps10951;Parent=Thaps10951;rank=3 chr18 . exon 520413 520568 . + . ID=Thaps10951.3;Parent=Thaps10951;constitutive=1;rank=3 chr18 . CDS 520654 520692 . + 0 ID=Thaps10951;Parent=Thaps10951;rank=4 chr18 . exon 520654 520692 . + . ID=Thaps10951.4;Parent=Thaps10951;constitutive=1;rank=4 chr18 . CDS 520910 520963 . + 0 ID=Thaps10951;Parent=Thaps10951;rank=5 chr18 . exon 520910 520963 . + . ID=Thaps10951.5;Parent=Thaps10951;constitutive=1;rank=5 chr18 . CDS 521053 521085 . + 0 ID=Thaps10951;Parent=Thaps10951;rank=6 chr18 . exon 521053 521085 . + . ID=Thaps10951.6;Parent=Thaps10951;constitutive=1;rank=6 chr18 . CDS 521176 521349 . + 0 ID=Thaps10951;Parent=Thaps10951;rank=7 chr18 . exon 521176 521349 . + . ID=Thaps10951.7;Parent=Thaps10951;constitutive=1;rank=7 chr18 . CDS 521435 521488 . + 0 ID=Thaps10951;Parent=Thaps10951;rank=8 chr18 . exon 521435 521488 . + . ID=Thaps10951.8;Parent=Thaps10951;constitutive=1;rank=8 chr18 ensembl protein_coding_gene 523214 525945 . - . ID=Thaps10952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ5];external_name=Thaps10952;logic_name=jgi_thaps3 chr18 ensembl transcript 523214 525945 . - . ID=Thaps10952;Parent=Thaps10952;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 523214 524844 . - 0 ID=Thaps10952;Parent=Thaps10952;rank=3 chr18 . exon 523214 524844 . - . ID=Thaps10952.3;Parent=Thaps10952;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 524895 524974 . - 0 ID=Thaps10952;Parent=Thaps10952;rank=2 chr18 . exon 524895 524974 . - . ID=Thaps10952.2;Parent=Thaps10952;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 525245 525945 . - 0 ID=Thaps10952;Parent=Thaps10952;rank=1 chr18 . exon 525245 525945 . - . ID=Thaps10952.1;Parent=Thaps10952;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 527685 529445 . - . ID=Thaps10953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ6];external_name=Thaps10953;logic_name=jgi_thaps3 chr18 ensembl transcript 527685 529445 . - . ID=Thaps10953;Parent=Thaps10953;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 527685 529445 . - 0 ID=Thaps10953;Parent=Thaps10953;rank=1 chr18 . exon 527685 529445 . - . ID=Thaps10953.1;Parent=Thaps10953;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 531814 532731 . - . ID=Thaps10955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ8];external_name=Thaps10955;logic_name=jgi_thaps3 chr18 ensembl transcript 531814 532731 . - . ID=Thaps10955;Parent=Thaps10955;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 531814 532731 . - 0 ID=Thaps10955;Parent=Thaps10955;rank=1 chr18 . exon 531814 532731 . - . ID=Thaps10955.1;Parent=Thaps10955;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 529888 531745 . + . ID=Thaps25388;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ7];external_name=Thaps25388;logic_name=jgi_thaps3 chr18 ensembl transcript 529888 531745 . + . ID=Thaps25388;Parent=Thaps25388;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 529888 531682 . + 0 ID=Thaps25388;Parent=Thaps25388;rank=1 chr18 . exon 529888 531682 . + . ID=Thaps25388.1;Parent=Thaps25388;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 531726 531745 . + 0 ID=Thaps25388;Parent=Thaps25388;rank=2 chr18 . exon 531726 531745 . + . ID=Thaps25388.2;Parent=Thaps25388;constitutive=1;ensembl_end_phase=2;rank=2 chr18 ensembl protein_coding_gene 534755 535546 . - . ID=Thaps25389;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YLZ9];external_name=Thaps25389;logic_name=jgi_thaps3 chr18 ensembl transcript 534755 535546 . - . ID=Thaps25389;Parent=Thaps25389;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 534755 535546 . - 0 ID=Thaps25389;Parent=Thaps25389;rank=1 chr18 . exon 534755 535546 . - . ID=Thaps25389.1;Parent=Thaps25389;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 535780 536505 . - . ID=Thaps38186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM00];external_name=Thaps38186;logic_name=jgi_thaps3 chr18 ensembl transcript 535780 536505 . - . ID=Thaps38186;Parent=Thaps38186;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 535780 536268 . - 0 ID=Thaps38186;Parent=Thaps38186;rank=2 chr18 . exon 535780 536268 . - . ID=Thaps38186.2;Parent=Thaps38186;constitutive=1;rank=2 chr18 . CDS 536335 536505 . - 0 ID=Thaps38186;Parent=Thaps38186;rank=1 chr18 . exon 536335 536505 . - . ID=Thaps38186.1;Parent=Thaps38186;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 539604 542441 . - . ID=Thaps25391;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM01];external_name=Thaps25391;logic_name=jgi_thaps3 chr18 ensembl transcript 539604 542441 . - . ID=Thaps25391;Parent=Thaps25391;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 539604 540105 . - 0 ID=Thaps25391;Parent=Thaps25391;rank=4 chr18 . exon 539604 540105 . - . ID=Thaps25391.4;Parent=Thaps25391;constitutive=1;ensembl_end_phase=1;rank=4 chr18 . CDS 540156 540881 . - 0 ID=Thaps25391;Parent=Thaps25391;rank=3 chr18 . exon 540156 540881 . - . ID=Thaps25391.3;Parent=Thaps25391;constitutive=1;rank=3 chr18 . CDS 540945 541979 . - 0 ID=Thaps25391;Parent=Thaps25391;rank=2 chr18 . exon 540945 541979 . - . ID=Thaps25391.2;Parent=Thaps25391;constitutive=1;rank=2 chr18 . CDS 542104 542441 . - 0 ID=Thaps25391;Parent=Thaps25391;rank=1 chr18 . exon 542104 542441 . - . ID=Thaps25391.1;Parent=Thaps25391;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 542993 574448 . - . ID=Thaps25392;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM02];external_name=Thaps25392;logic_name=jgi_thaps3 chr18 ensembl transcript 542993 574448 . - . ID=Thaps25392;Parent=Thaps25392;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 542993 543629 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=62 chr18 . exon 542993 543629 . - . ID=Thaps25392.62;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=62 chr18 . CDS 543704 544649 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=61 chr18 . exon 543704 544649 . - . ID=Thaps25392.61;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=61 chr18 . CDS 544753 544911 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=60 chr18 . exon 544753 544911 . - . ID=Thaps25392.60;Parent=Thaps25392;constitutive=1;rank=60 chr18 . CDS 545006 545224 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=59 chr18 . exon 545006 545224 . - . ID=Thaps25392.59;Parent=Thaps25392;constitutive=1;rank=59 chr18 . CDS 545309 545353 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=58 chr18 . exon 545309 545353 . - . ID=Thaps25392.58;Parent=Thaps25392;constitutive=1;rank=58 chr18 . CDS 545436 545741 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=57 chr18 . exon 545436 545741 . - . ID=Thaps25392.57;Parent=Thaps25392;constitutive=1;rank=57 chr18 . CDS 545830 545990 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=56 chr18 . exon 545830 545990 . - . ID=Thaps25392.56;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=56 chr18 . CDS 546208 546476 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=55 chr18 . exon 546208 546476 . - . ID=Thaps25392.55;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=55 chr18 . CDS 546748 546897 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=54 chr18 . exon 546748 546897 . - . ID=Thaps25392.54;Parent=Thaps25392;constitutive=1;rank=54 chr18 . CDS 546999 547201 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=53 chr18 . exon 546999 547201 . - . ID=Thaps25392.53;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=53 chr18 . CDS 547360 547534 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=52 chr18 . exon 547360 547534 . - . ID=Thaps25392.52;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=52 chr18 . CDS 547636 548273 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=51 chr18 . exon 547636 548273 . - . ID=Thaps25392.51;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=51 chr18 . CDS 548350 548446 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=50 chr18 . CDS 548528 549758 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=49 chr18 . CDS 549844 550253 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=48 chr18 . CDS 550337 551015 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=47 chr18 . CDS 551095 551584 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=46 chr18 . CDS 551676 551762 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=45 chr18 . CDS 551845 552035 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=44 chr18 . CDS 552131 552183 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=43 chr18 . CDS 552279 552436 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=42 chr18 . CDS 552518 552704 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=41 chr18 . CDS 552878 553000 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=40 chr18 . CDS 553076 553346 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=39 chr18 . CDS 553435 554983 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=38 chr18 . CDS 555072 555528 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=37 chr18 . CDS 555622 555758 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=36 chr18 . CDS 555885 556014 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=35 chr18 . CDS 556097 556322 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=34 chr18 . CDS 556418 556755 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=33 chr18 . CDS 556909 556958 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=32 chr18 . CDS 557045 557462 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=31 chr18 . CDS 557669 557751 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=30 chr18 . CDS 557823 558141 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=29 chr18 . CDS 558184 558232 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=28 chr18 . CDS 558319 558388 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=27 chr18 . CDS 558472 558711 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=26 chr18 . CDS 558866 559008 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=25 chr18 . CDS 559102 559573 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=24 chr18 . CDS 559784 560296 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=23 chr18 . CDS 560376 560490 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=22 chr18 . CDS 560641 562381 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=21 chr18 . CDS 562465 562708 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=20 chr18 . CDS 562798 562866 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=19 chr18 . CDS 562892 563244 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=18 chr18 . CDS 563312 563901 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=17 chr18 . CDS 563989 564364 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=16 chr18 . CDS 564477 564615 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=15 chr18 . CDS 564674 565066 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=14 chr18 . CDS 565162 566061 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=13 chr18 . CDS 566146 567770 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=12 chr18 . CDS 567851 568755 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=11 chr18 . CDS 568835 569364 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=10 chr18 . CDS 569469 569923 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=9 chr18 . CDS 570016 570443 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=8 chr18 . CDS 570536 570680 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=7 chr18 . CDS 570779 571013 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=6 chr18 . CDS 571039 571896 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=5 chr18 . CDS 571984 572406 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=4 chr18 . CDS 572502 573402 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=3 chr18 . CDS 573491 574066 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=2 chr18 . CDS 574137 574448 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=1 chr18 . repeat_region 556761 556805 . ? . description=dust chr18 . exon 548350 548446 . - . ID=Thaps25392.50;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=50 chr18 . exon 548528 549758 . - . ID=Thaps25392.49;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=49 chr18 . exon 549844 550253 . - . ID=Thaps25392.48;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=48 chr18 . exon 550337 551015 . - . ID=Thaps25392.47;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=47 chr18 . exon 551095 551584 . - . ID=Thaps25392.46;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=46 chr18 . exon 551676 551762 . - . ID=Thaps25392.45;Parent=Thaps25392;constitutive=1;rank=45 chr18 . exon 551845 552035 . - . ID=Thaps25392.44;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=44 chr18 . exon 552131 552183 . - . ID=Thaps25392.43;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=43 chr18 . exon 552279 552436 . - . ID=Thaps25392.42;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=42 chr18 . exon 552518 552704 . - . ID=Thaps25392.41;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=41 chr18 . exon 552878 553000 . - . ID=Thaps25392.40;Parent=Thaps25392;constitutive=1;rank=40 chr18 . exon 553076 553346 . - . ID=Thaps25392.39;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=39 chr18 . exon 553435 554983 . - . ID=Thaps25392.38;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=38 chr18 . exon 555072 555528 . - . ID=Thaps25392.37;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=37 chr18 . exon 555622 555758 . - . ID=Thaps25392.36;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=36 chr18 . exon 555885 556014 . - . ID=Thaps25392.35;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=35 chr18 . exon 556097 556322 . - . ID=Thaps25392.34;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=34 chr18 . exon 556418 556755 . - . ID=Thaps25392.33;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=33 chr18 . exon 556909 556958 . - . ID=Thaps25392.32;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=32 chr18 . exon 557045 557462 . - . ID=Thaps25392.31;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=31 chr18 . exon 557669 557751 . - . ID=Thaps25392.30;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=30 chr18 . exon 557823 558141 . - . ID=Thaps25392.29;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=29 chr18 ensembl protein_coding_gene 542993 574448 . - . ID=Thaps25392;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM02];external_name=Thaps25392;logic_name=jgi_thaps3 chr18 ensembl transcript 542993 574448 . - . ID=Thaps25392;Parent=Thaps25392;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 542993 543629 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=62 chr18 . CDS 543704 544649 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=61 chr18 . CDS 544753 544911 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=60 chr18 . CDS 545006 545224 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=59 chr18 . CDS 545309 545353 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=58 chr18 . CDS 545436 545741 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=57 chr18 . CDS 545830 545990 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=56 chr18 . CDS 546208 546476 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=55 chr18 . CDS 546748 546897 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=54 chr18 . CDS 546999 547201 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=53 chr18 . CDS 547360 547534 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=52 chr18 . CDS 547636 548273 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=51 chr18 . CDS 548350 548446 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=50 chr18 . CDS 548528 549758 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=49 chr18 . CDS 549844 550253 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=48 chr18 . CDS 550337 551015 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=47 chr18 . CDS 551095 551584 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=46 chr18 . CDS 551676 551762 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=45 chr18 . CDS 551845 552035 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=44 chr18 . CDS 552131 552183 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=43 chr18 . CDS 552279 552436 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=42 chr18 . CDS 552518 552704 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=41 chr18 . CDS 552878 553000 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=40 chr18 . CDS 553076 553346 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=39 chr18 . CDS 553435 554983 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=38 chr18 . CDS 555072 555528 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=37 chr18 . CDS 555622 555758 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=36 chr18 . CDS 555885 556014 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=35 chr18 . CDS 556097 556322 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=34 chr18 . CDS 556418 556755 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=33 chr18 . CDS 556909 556958 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=32 chr18 . CDS 557045 557462 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=31 chr18 . CDS 557669 557751 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=30 chr18 . CDS 557823 558141 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=29 chr18 . CDS 558184 558232 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=28 chr18 . exon 558184 558232 . - . ID=Thaps25392.28;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=28 chr18 . CDS 558319 558388 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=27 chr18 . exon 558319 558388 . - . ID=Thaps25392.27;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=27 chr18 . CDS 558472 558711 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=26 chr18 . exon 558472 558711 . - . ID=Thaps25392.26;Parent=Thaps25392;constitutive=1;rank=26 chr18 . CDS 558866 559008 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=25 chr18 . exon 558866 559008 . - . ID=Thaps25392.25;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=25 chr18 . CDS 559102 559573 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=24 chr18 . exon 559102 559573 . - . ID=Thaps25392.24;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=24 chr18 . CDS 559784 560296 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=23 chr18 . exon 559784 560296 . - . ID=Thaps25392.23;Parent=Thaps25392;constitutive=1;rank=23 chr18 . CDS 560376 560490 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=22 chr18 . exon 560376 560490 . - . ID=Thaps25392.22;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=22 chr18 . CDS 560641 562381 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=21 chr18 . exon 560641 562381 . - . ID=Thaps25392.21;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=21 chr18 . CDS 562465 562708 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=20 chr18 . exon 562465 562708 . - . ID=Thaps25392.20;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=20 chr18 . CDS 562798 562866 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=19 chr18 . exon 562798 562866 . - . ID=Thaps25392.19;Parent=Thaps25392;constitutive=1;rank=19 chr18 . CDS 562892 563244 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=18 chr18 . exon 562892 563244 . - . ID=Thaps25392.18;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=18 chr18 . CDS 563312 563901 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=17 chr18 . exon 563312 563901 . - . ID=Thaps25392.17;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=17 chr18 . CDS 563989 564364 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=16 chr18 . exon 563989 564364 . - . ID=Thaps25392.16;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=16 chr18 . CDS 564477 564615 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=15 chr18 . exon 564477 564615 . - . ID=Thaps25392.15;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=15 chr18 . CDS 564674 565066 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=14 chr18 . exon 564674 565066 . - . ID=Thaps25392.14;Parent=Thaps25392;constitutive=1;rank=14 chr18 . CDS 565162 566061 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=13 chr18 . exon 565162 566061 . - . ID=Thaps25392.13;Parent=Thaps25392;constitutive=1;rank=13 chr18 . CDS 566146 567770 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=12 chr18 . exon 566146 567770 . - . ID=Thaps25392.12;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=12 chr18 . CDS 567851 568755 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=11 chr18 . exon 567851 568755 . - . ID=Thaps25392.11;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=11 chr18 . CDS 568835 569364 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=10 chr18 . CDS 569469 569923 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=9 chr18 . CDS 570016 570443 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=8 chr18 . CDS 570536 570680 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=7 chr18 . CDS 570779 571013 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=6 chr18 . CDS 571039 571896 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=5 chr18 . CDS 571984 572406 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=4 chr18 . CDS 572502 573402 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=3 chr18 . CDS 573491 574066 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=2 chr18 . CDS 574137 574448 . - 0 ID=Thaps25392;Parent=Thaps25392;rank=1 chr18 . repeat_region 576595 576602 . ? . description=dust chr18 ensembl protein_coding_gene 577259 578215 . + . ID=Thaps10961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM04];external_name=Thaps10961;logic_name=jgi_thaps3 chr18 ensembl transcript 577259 578215 . + . ID=Thaps10961;Parent=Thaps10961;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 577259 578215 . + 0 ID=Thaps10961;Parent=Thaps10961;rank=1 chr18 . exon 577259 578215 . + . ID=Thaps10961.1;Parent=Thaps10961;constitutive=1;rank=1 chr18 . exon 568835 569364 . - . ID=Thaps25392.10;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=10 chr18 . exon 569469 569923 . - . ID=Thaps25392.9;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=9 chr18 . exon 570016 570443 . - . ID=Thaps25392.8;Parent=Thaps25392;constitutive=1;ensembl_end_phase=2;rank=8 chr18 . exon 570536 570680 . - . ID=Thaps25392.7;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=7 chr18 . exon 570779 571013 . - . ID=Thaps25392.6;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=6 chr18 . exon 571039 571896 . - . ID=Thaps25392.5;Parent=Thaps25392;constitutive=1;rank=5 chr18 . exon 571984 572406 . - . ID=Thaps25392.4;Parent=Thaps25392;constitutive=1;rank=4 chr18 . exon 572502 573402 . - . ID=Thaps25392.3;Parent=Thaps25392;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . exon 573491 574066 . - . ID=Thaps25392.2;Parent=Thaps25392;constitutive=1;rank=2 chr18 . exon 574137 574448 . - . ID=Thaps25392.1;Parent=Thaps25392;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 575214 575831 . - . ID=Thaps264532;biotype=protein_coding;description=Cyanate hydratase [Source:UniProtKB/Swiss-Prot%3BAcc:B5YM03];external_name=CYN;logic_name=jgi_thaps3 chr18 ensembl transcript 575214 575831 . - . ID=Thaps264532;Parent=Thaps264532;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 575214 575831 . - 0 ID=Thaps264532;Parent=Thaps264532;rank=1 chr18 . exon 575214 575831 . - . ID=Thaps264532.1;Parent=Thaps264532;constitutive=1;rank=1 chr18 . repeat_region 579680 579699 . ? . description=trf chr18 . repeat_region 580025 580049 . ? . description=trf chr18 ensembl protein_coding_gene 580552 581703 . - . ID=Thaps10963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM06];external_name=Thaps10963;logic_name=jgi_thaps3 chr18 ensembl transcript 580552 581703 . - . ID=Thaps10963;Parent=Thaps10963;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 580552 581703 . - 0 ID=Thaps10963;Parent=Thaps10963;rank=1 chr18 . exon 580552 581703 . - . ID=Thaps10963.1;Parent=Thaps10963;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 582534 583244 . - . ID=Thaps10964;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM07];external_name=Thaps10964;logic_name=jgi_thaps3 chr18 ensembl transcript 582534 583244 . - . ID=Thaps10964;Parent=Thaps10964;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 582534 583244 . - 0 ID=Thaps10964;Parent=Thaps10964;rank=1 chr18 . exon 582534 583244 . - . ID=Thaps10964.1;Parent=Thaps10964;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 585496 586341 . + . ID=Thaps10965;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM08];external_name=Thaps10965;logic_name=jgi_thaps3 chr18 ensembl transcript 585496 586341 . + . ID=Thaps10965;Parent=Thaps10965;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 585496 586341 . + 0 ID=Thaps10965;Parent=Thaps10965;rank=1 chr18 . exon 585496 586341 . + . ID=Thaps10965.1;Parent=Thaps10965;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 586584 587108 . - . ID=Thaps25393;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM09];external_name=Thaps25393;logic_name=jgi_thaps3 chr18 ensembl transcript 586584 587108 . - . ID=Thaps25393;Parent=Thaps25393;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 586584 587108 . - 0 ID=Thaps25393;Parent=Thaps25393;rank=1 chr18 . exon 586584 587108 . - . ID=Thaps25393.1;Parent=Thaps25393;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 579838 580005 . + . ID=Thaps264533;biotype=protein_coding;description=Basic leucine zipper protein smilarity%2C DNA binding%2C transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B5YM05];external_name=BZIP4;logic_name=jgi_thaps3 chr18 ensembl transcript 579838 580005 . + . ID=Thaps264533;Parent=Thaps264533;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 579838 580005 . + 0 ID=Thaps264533;Parent=Thaps264533;rank=1 chr18 . exon 579838 580005 . + . ID=Thaps264533.1;Parent=Thaps264533;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 587712 589051 . + . ID=Thaps264534;biotype=protein_coding;description=Possible amino acid/polyamine transporter family II protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM10];external_name=Thaps264534;logic_name=jgi_thaps3 chr18 ensembl transcript 587712 589051 . + . ID=Thaps264534;Parent=Thaps264534;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 587712 587820 . + 0 ID=Thaps264534;Parent=Thaps264534;rank=1 chr18 . exon 587712 587820 . + . ID=Thaps264534.1;Parent=Thaps264534;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 587915 588186 . + 0 ID=Thaps264534;Parent=Thaps264534;rank=2 chr18 . exon 587915 588186 . + . ID=Thaps264534.2;Parent=Thaps264534;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 588359 589051 . + 0 ID=Thaps264534;Parent=Thaps264534;rank=3 chr18 . repeat_region 592215 592238 . ? . description=dust chr18 ensembl protein_coding_gene 592764 593918 . - . ID=Thaps10969;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM12];external_name=Thaps10969;logic_name=jgi_thaps3 chr18 ensembl transcript 592764 593918 . - . ID=Thaps10969;Parent=Thaps10969;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 592764 593918 . - 0 ID=Thaps10969;Parent=Thaps10969;rank=1 chr18 . exon 592764 593918 . - . ID=Thaps10969.1;Parent=Thaps10969;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 589986 592241 . + . ID=Thaps25395;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM11];external_name=Thaps25395;logic_name=jgi_thaps3 chr18 ensembl transcript 589986 592241 . + . ID=Thaps25395;Parent=Thaps25395;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 589986 590132 . + 0 ID=Thaps25395;Parent=Thaps25395;rank=1 chr18 . exon 589986 590132 . + . ID=Thaps25395.1;Parent=Thaps25395;constitutive=1;rank=1 chr18 . CDS 590207 590238 . + 0 ID=Thaps25395;Parent=Thaps25395;rank=2 chr18 . exon 590207 590238 . + . ID=Thaps25395.2;Parent=Thaps25395;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 590282 592241 . + 0 ID=Thaps25395;Parent=Thaps25395;rank=3 chr18 . exon 590282 592241 . + . ID=Thaps25395.3;Parent=Thaps25395;constitutive=1;ensembl_end_phase=1;rank=3 chr18 ensembl protein_coding_gene 594191 594739 . + . ID=Thaps25396;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM13];external_name=Thaps25396;logic_name=jgi_thaps3 chr18 ensembl transcript 594191 594739 . + . ID=Thaps25396;Parent=Thaps25396;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 594191 594739 . + 0 ID=Thaps25396;Parent=Thaps25396;rank=1 chr18 . exon 594191 594739 . + . ID=Thaps25396.1;Parent=Thaps25396;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 594952 599919 . - . ID=Thaps25397;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM14];external_name=Thaps25397;logic_name=jgi_thaps3 chr18 ensembl transcript 594952 599919 . - . ID=Thaps25397;Parent=Thaps25397;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 594952 598359 . - 0 ID=Thaps25397;Parent=Thaps25397;rank=4 chr18 . exon 594952 598359 . - . ID=Thaps25397.4;Parent=Thaps25397;constitutive=1;rank=4 chr18 . CDS 598410 599059 . - 0 ID=Thaps25397;Parent=Thaps25397;rank=3 chr18 . CDS 599131 599713 . - 0 ID=Thaps25397;Parent=Thaps25397;rank=2 chr18 . CDS 599788 599919 . - 0 ID=Thaps25397;Parent=Thaps25397;rank=1 chr18 . exon 588359 589051 . + . ID=Thaps264534.3;Parent=Thaps264534;constitutive=1;rank=3 chr18 . biological_region 604326 604330 0.999 - . logic_name=eponine chr18 . repeat_region 605261 605293 . ? . description=trf chr18 . repeat_region 607807 607830 . ? . description=trf chr18 ensembl protein_coding_gene 600212 600889 . + . ID=Thaps10972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM15];external_name=Thaps10972;logic_name=jgi_thaps3 chr18 ensembl transcript 600212 600889 . + . ID=Thaps10972;Parent=Thaps10972;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 600212 600889 . + 0 ID=Thaps10972;Parent=Thaps10972;rank=1 chr18 . exon 600212 600889 . + . ID=Thaps10972.1;Parent=Thaps10972;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 605162 606960 . + . ID=Thaps10975;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM18];external_name=Thaps10975;logic_name=jgi_thaps3 chr18 ensembl transcript 605162 606960 . + . ID=Thaps10975;Parent=Thaps10975;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 605162 605825 . + 0 ID=Thaps10975;Parent=Thaps10975;rank=1 chr18 . exon 605162 605825 . + . ID=Thaps10975.1;Parent=Thaps10975;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 605921 606960 . + 0 ID=Thaps10975;Parent=Thaps10975;rank=2 chr18 . exon 605921 606960 . + . ID=Thaps10975.2;Parent=Thaps10975;constitutive=1;ensembl_end_phase=2;rank=2 chr18 ensembl protein_coding_gene 607008 608112 . - . ID=Thaps10976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM19];external_name=Thaps10976;logic_name=jgi_thaps3 chr18 ensembl transcript 607008 608112 . - . ID=Thaps10976;Parent=Thaps10976;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 607008 607025 . - 0 ID=Thaps10976;Parent=Thaps10976;rank=2 chr18 . exon 607008 607025 . - . ID=Thaps10976.2;Parent=Thaps10976;constitutive=1;rank=2 chr18 . CDS 607096 608112 . - 0 ID=Thaps10976;Parent=Thaps10976;rank=1 chr18 . exon 607096 608112 . - . ID=Thaps10976.1;Parent=Thaps10976;constitutive=1;rank=1 chr18 . exon 598410 599059 . - . ID=Thaps25397.3;Parent=Thaps25397;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . exon 599131 599713 . - . ID=Thaps25397.2;Parent=Thaps25397;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . exon 599788 599919 . - . ID=Thaps25397.1;Parent=Thaps25397;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 601246 602109 . - . ID=Thaps25398;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM16];external_name=Thaps25398;logic_name=jgi_thaps3 chr18 ensembl transcript 601246 602109 . - . ID=Thaps25398;Parent=Thaps25398;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 601246 602109 . - 0 ID=Thaps25398;Parent=Thaps25398;rank=1 chr18 . exon 601246 602109 . - . ID=Thaps25398.1;Parent=Thaps25398;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 602561 604704 . - . ID=Thaps25399;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM17];external_name=Thaps25399;logic_name=jgi_thaps3 chr18 ensembl transcript 602561 604704 . - . ID=Thaps25399;Parent=Thaps25399;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 602561 602707 . - 0 ID=Thaps25399;Parent=Thaps25399;rank=5 chr18 . exon 602561 602707 . - . ID=Thaps25399.5;Parent=Thaps25399;constitutive=1;rank=5 chr18 . CDS 602848 604004 . - 0 ID=Thaps25399;Parent=Thaps25399;rank=4 chr18 . exon 602848 604004 . - . ID=Thaps25399.4;Parent=Thaps25399;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 604195 604340 . - 0 ID=Thaps25399;Parent=Thaps25399;rank=3 chr18 . exon 604195 604340 . - . ID=Thaps25399.3;Parent=Thaps25399;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 604361 604513 . - 0 ID=Thaps25399;Parent=Thaps25399;rank=2 chr18 . exon 604361 604513 . - . ID=Thaps25399.2;Parent=Thaps25399;constitutive=1;rank=2 chr18 . CDS 604562 604704 . - 0 ID=Thaps25399;Parent=Thaps25399;rank=1 chr18 . exon 604562 604704 . - . ID=Thaps25399.1;Parent=Thaps25399;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . repeat_region 615605 615656 . ? . description=dust chr18 ensembl protein_coding_gene 611024 612031 . + . ID=Thaps10978;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM22];external_name=Thaps10978;logic_name=jgi_thaps3 chr18 ensembl transcript 611024 612031 . + . ID=Thaps10978;Parent=Thaps10978;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 611024 612031 . + 0 ID=Thaps10978;Parent=Thaps10978;rank=1 chr18 . exon 611024 612031 . + . ID=Thaps10978.1;Parent=Thaps10978;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 612122 614611 . - . ID=Thaps10979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM23];external_name=Thaps10979;logic_name=jgi_thaps3 chr18 ensembl transcript 612122 614611 . - . ID=Thaps10979;Parent=Thaps10979;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 612122 614611 . - 0 ID=Thaps10979;Parent=Thaps10979;rank=1 chr18 . exon 612122 614611 . - . ID=Thaps10979.1;Parent=Thaps10979;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 608432 609461 . + . ID=Thaps30400;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM20];external_name=Thaps30400;logic_name=jgi_thaps3 chr18 ensembl transcript 608432 609461 . + . ID=Thaps30400;Parent=Thaps30400;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 608432 608786 . + 0 ID=Thaps30400;Parent=Thaps30400;rank=1 chr18 . exon 608432 608786 . + . ID=Thaps30400.1;Parent=Thaps30400;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 608890 609461 . + 0 ID=Thaps30400;Parent=Thaps30400;rank=2 chr18 . exon 608890 609461 . + . ID=Thaps30400.2;Parent=Thaps30400;constitutive=1;ensembl_end_phase=2;rank=2 chr18 ensembl protein_coding_gene 609840 610496 . + . ID=Thaps38095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM21];external_name=Thaps38095;logic_name=jgi_thaps3 chr18 ensembl transcript 609840 610496 . + . ID=Thaps38095;Parent=Thaps38095;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 609840 610126 . + 0 ID=Thaps38095;Parent=Thaps38095;rank=1 chr18 . exon 609840 610126 . + . ID=Thaps38095.1;Parent=Thaps38095;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 610250 610496 . + 0 ID=Thaps38095;Parent=Thaps38095;rank=2 chr18 . exon 610250 610496 . + . ID=Thaps38095.2;Parent=Thaps38095;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 616596 616823 . + . ID=Thaps38136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM24];external_name=Thaps38136;logic_name=jgi_thaps3 chr18 ensembl transcript 616596 616823 . + . ID=Thaps38136;Parent=Thaps38136;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 616596 616823 . + 0 ID=Thaps38136;Parent=Thaps38136;rank=1 chr18 . exon 616596 616823 . + . ID=Thaps38136.1;Parent=Thaps38136;constitutive=1;rank=1 chr18 . repeat_region 619231 619305 . ? . description=trf chr18 . repeat_region 625155 625183 . ? . description=trf chr18 ensembl protein_coding_gene 623585 624538 . - . ID=Thaps10983;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM27];external_name=Thaps10983;logic_name=jgi_thaps3 chr18 ensembl transcript 623585 624538 . - . ID=Thaps10983;Parent=Thaps10983;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 623585 624538 . - 0 ID=Thaps10983;Parent=Thaps10983;rank=1 chr18 . exon 623585 624538 . - . ID=Thaps10983.1;Parent=Thaps10983;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 624968 626431 . - . ID=Thaps10984;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM28];external_name=Thaps10984;logic_name=jgi_thaps3 chr18 ensembl transcript 624968 626431 . - . ID=Thaps10984;Parent=Thaps10984;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 624968 626431 . - 0 ID=Thaps10984;Parent=Thaps10984;rank=1 chr18 . exon 624968 626431 . - . ID=Thaps10984.1;Parent=Thaps10984;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 626953 627999 . - . ID=Thaps10985;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM29];external_name=Thaps10985;logic_name=jgi_thaps3 chr18 ensembl transcript 626953 627999 . - . ID=Thaps10985;Parent=Thaps10985;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 626953 627276 . - 0 ID=Thaps10985;Parent=Thaps10985;rank=3 chr18 . exon 626953 627276 . - . ID=Thaps10985.3;Parent=Thaps10985;constitutive=1;rank=3 chr18 . CDS 627576 627620 . - 0 ID=Thaps10985;Parent=Thaps10985;rank=2 chr18 . exon 627576 627620 . - . ID=Thaps10985.2;Parent=Thaps10985;constitutive=1;rank=2 chr18 . CDS 627760 627999 . - 0 ID=Thaps10985;Parent=Thaps10985;rank=1 chr18 . exon 627760 627999 . - . ID=Thaps10985.1;Parent=Thaps10985;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 621922 623209 . + . ID=Thaps264537;biotype=protein_coding;description=Possible amino acid/polyamine transporter family II [Source:UniProtKB/TrEMBL%3BAcc:B5YM26];external_name=Thaps264537;logic_name=jgi_thaps3 chr18 ensembl transcript 621922 623209 . + . ID=Thaps264537;Parent=Thaps264537;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 621922 621994 . + 0 ID=Thaps264537;Parent=Thaps264537;rank=1 chr18 . exon 621922 621994 . + . ID=Thaps264537.1;Parent=Thaps264537;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 622038 622062 . + 0 ID=Thaps264537;Parent=Thaps264537;rank=2 chr18 . exon 622038 622062 . + . ID=Thaps264537.2;Parent=Thaps264537;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 622095 622568 . + 0 ID=Thaps264537;Parent=Thaps264537;rank=3 chr18 . exon 622095 622568 . + . ID=Thaps264537.3;Parent=Thaps264537;constitutive=1;rank=3 chr18 . CDS 622659 622895 . + 0 ID=Thaps264537;Parent=Thaps264537;rank=4 chr18 . exon 622659 622895 . + . ID=Thaps264537.4;Parent=Thaps264537;constitutive=1;rank=4 chr18 . CDS 622941 623209 . + 0 ID=Thaps264537;Parent=Thaps264537;rank=5 chr18 . exon 622941 623209 . + . ID=Thaps264537.5;Parent=Thaps264537;constitutive=1;ensembl_end_phase=2;rank=5 chr18 ensembl protein_coding_gene 619728 620442 . - . ID=Thaps38122;biotype=protein_coding;description=Fucoxanthin chl a/c light-harvesting protein%2C major type [Source:UniProtKB/TrEMBL%3BAcc:B5YM25];external_name=LHCF10;logic_name=jgi_thaps3 chr18 ensembl transcript 619728 620442 . - . ID=Thaps38122;Parent=Thaps38122;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 619728 619820 . - 0 ID=Thaps38122;Parent=Thaps38122;rank=3 chr18 . exon 619728 619820 . - . ID=Thaps38122.3;Parent=Thaps38122;constitutive=1;rank=3 chr18 . CDS 619911 620119 . - 0 ID=Thaps38122;Parent=Thaps38122;rank=2 chr18 . exon 619911 620119 . - . ID=Thaps38122.2;Parent=Thaps38122;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 620223 620442 . - 0 ID=Thaps38122;Parent=Thaps38122;rank=1 chr18 . exon 620223 620442 . - . ID=Thaps38122.1;Parent=Thaps38122;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 628561 629394 . + . ID=Thaps10986;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM30];external_name=Thaps10986;logic_name=jgi_thaps3 chr18 ensembl transcript 628561 629394 . + . ID=Thaps10986;Parent=Thaps10986;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 628561 629394 . + 0 ID=Thaps10986;Parent=Thaps10986;rank=1 chr18 . exon 628561 629394 . + . ID=Thaps10986.1;Parent=Thaps10986;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 632863 634788 . - . ID=Thaps10989;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM33];external_name=Thaps10989;logic_name=jgi_thaps3 chr18 ensembl transcript 632863 634788 . - . ID=Thaps10989;Parent=Thaps10989;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 632863 634788 . - 0 ID=Thaps10989;Parent=Thaps10989;rank=1 chr18 . exon 632863 634788 . - . ID=Thaps10989.1;Parent=Thaps10989;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 630970 631887 . + . ID=Thaps17271;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM32];external_name=Thaps17271;logic_name=jgi_thaps3 chr18 ensembl transcript 630970 631887 . + . ID=Thaps17271;Parent=Thaps17271;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 630970 631087 . + 0 ID=Thaps17271;Parent=Thaps17271;rank=1 chr18 . exon 630970 631087 . + . ID=Thaps17271.1;Parent=Thaps17271;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 631205 631297 . + 0 ID=Thaps17271;Parent=Thaps17271;rank=2 chr18 . exon 631205 631297 . + . ID=Thaps17271.2;Parent=Thaps17271;constitutive=1;rank=2 chr18 . CDS 631349 631530 . + 0 ID=Thaps17271;Parent=Thaps17271;rank=3 chr18 . exon 631349 631530 . + . ID=Thaps17271.3;Parent=Thaps17271;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 631618 631887 . + 0 ID=Thaps17271;Parent=Thaps17271;rank=4 chr18 . exon 631618 631887 . + . ID=Thaps17271.4;Parent=Thaps17271;constitutive=1;rank=4 chr18 ensembl protein_coding_gene 637087 638463 . - . ID=Thaps38051;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM34];external_name=Thaps38051;logic_name=jgi_thaps3 chr18 ensembl transcript 637087 638463 . - . ID=Thaps38051;Parent=Thaps38051;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 637087 637502 . - 0 ID=Thaps38051;Parent=Thaps38051;rank=2 chr18 . exon 637087 637502 . - . ID=Thaps38051.2;Parent=Thaps38051;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 637644 638463 . - 0 ID=Thaps38051;Parent=Thaps38051;rank=1 chr18 . exon 637644 638463 . - . ID=Thaps38051.1;Parent=Thaps38051;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 630174 630674 . - . ID=Thaps38193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM31];external_name=Thaps38193;logic_name=jgi_thaps3 chr18 ensembl transcript 630174 630674 . - . ID=Thaps38193;Parent=Thaps38193;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 630174 630240 . - 0 ID=Thaps38193;Parent=Thaps38193;rank=2 chr18 . exon 630174 630240 . - . ID=Thaps38193.2;Parent=Thaps38193;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 630319 630674 . - 0 ID=Thaps38193;Parent=Thaps38193;rank=1 chr18 . exon 630319 630674 . - . ID=Thaps38193.1;Parent=Thaps38193;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 639928 643356 . - . ID=Thaps10991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM35];external_name=Thaps10991;logic_name=jgi_thaps3 chr18 ensembl transcript 639928 643356 . - . ID=Thaps10991;Parent=Thaps10991;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 639928 640397 . - 0 ID=Thaps10991;Parent=Thaps10991;rank=4 chr18 . exon 639928 640397 . - . ID=Thaps10991.4;Parent=Thaps10991;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 640522 640642 . - 0 ID=Thaps10991;Parent=Thaps10991;rank=3 chr18 . exon 640522 640642 . - . ID=Thaps10991.3;Parent=Thaps10991;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 640926 641077 . - 0 ID=Thaps10991;Parent=Thaps10991;rank=2 chr18 . exon 640926 641077 . - . ID=Thaps10991.2;Parent=Thaps10991;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 641235 643356 . - 0 ID=Thaps10991;Parent=Thaps10991;rank=1 chr18 . exon 641235 643356 . - . ID=Thaps10991.1;Parent=Thaps10991;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 643821 646070 . + . ID=Thaps10992;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM36];external_name=Thaps10992;logic_name=jgi_thaps3 chr18 ensembl transcript 643821 646070 . + . ID=Thaps10992;Parent=Thaps10992;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 643821 646070 . + 0 ID=Thaps10992;Parent=Thaps10992;rank=1 chr18 . exon 643821 646070 . + . ID=Thaps10992.1;Parent=Thaps10992;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 646990 647610 . + . ID=Thaps264541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM37];external_name=Thaps264541;logic_name=jgi_thaps3 chr18 ensembl transcript 646990 647610 . + . ID=Thaps264541;Parent=Thaps264541;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 646990 647144 . + 0 ID=Thaps264541;Parent=Thaps264541;rank=1 chr18 . exon 646990 647144 . + . ID=Thaps264541.1;Parent=Thaps264541;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 647298 647386 . + 0 ID=Thaps264541;Parent=Thaps264541;rank=2 chr18 . exon 647298 647386 . + . ID=Thaps264541.2;Parent=Thaps264541;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 647481 647610 . + 0 ID=Thaps264541;Parent=Thaps264541;rank=3 chr18 . exon 647481 647610 . + . ID=Thaps264541.3;Parent=Thaps264541;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . repeat_region 648355 648390 . ? . description=trf chr18 . repeat_region 652126 652166 . ? . description=dust chr18 . repeat_region 652147 652184 . ? . description=trf chr18 ensembl protein_coding_gene 654560 655120 . + . ID=Thaps10996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM40];external_name=Thaps10996;logic_name=jgi_thaps3 chr18 ensembl transcript 654560 655120 . + . ID=Thaps10996;Parent=Thaps10996;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 654560 655120 . + 0 ID=Thaps10996;Parent=Thaps10996;rank=1 chr18 . exon 654560 655120 . + . ID=Thaps10996.1;Parent=Thaps10996;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 656719 657414 . - . ID=Thaps10997;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM41];external_name=Thaps10997;logic_name=jgi_thaps3 chr18 ensembl transcript 656719 657414 . - . ID=Thaps10997;Parent=Thaps10997;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 656719 657414 . - 0 ID=Thaps10997;Parent=Thaps10997;rank=1 chr18 . exon 656719 657414 . - . ID=Thaps10997.1;Parent=Thaps10997;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 652534 653774 . - . ID=Thaps25407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM39];external_name=Thaps25407;logic_name=jgi_thaps3 chr18 ensembl transcript 652534 653774 . - . ID=Thaps25407;Parent=Thaps25407;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 652534 653137 . - 0 ID=Thaps25407;Parent=Thaps25407;rank=2 chr18 . exon 652534 653137 . - . ID=Thaps25407.2;Parent=Thaps25407;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 653476 653774 . - 0 ID=Thaps25407;Parent=Thaps25407;rank=1 chr18 . exon 653476 653774 . - . ID=Thaps25407.1;Parent=Thaps25407;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 650983 652093 . + . ID=Thaps38073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM38];external_name=Thaps38073;logic_name=jgi_thaps3 chr18 ensembl transcript 650983 652093 . + . ID=Thaps38073;Parent=Thaps38073;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 650983 651199 . + 0 ID=Thaps38073;Parent=Thaps38073;rank=1 chr18 . exon 650983 651199 . + . ID=Thaps38073.1;Parent=Thaps38073;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 651284 651421 . + 0 ID=Thaps38073;Parent=Thaps38073;rank=2 chr18 . exon 651284 651421 . + . ID=Thaps38073.2;Parent=Thaps38073;constitutive=1;rank=2 chr18 . CDS 651582 652093 . + 0 ID=Thaps38073;Parent=Thaps38073;rank=3 chr18 . exon 651582 652093 . + . ID=Thaps38073.3;Parent=Thaps38073;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 666279 667769 . - . ID=Thaps11004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM47];external_name=Thaps11004;logic_name=jgi_thaps3 chr18 ensembl transcript 666279 667769 . - . ID=Thaps11004;Parent=Thaps11004;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 666279 667769 . - 0 ID=Thaps11004;Parent=Thaps11004;rank=1 chr18 . exon 666279 667769 . - . ID=Thaps11004.1;Parent=Thaps11004;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 663699 664753 . - . ID=Thaps16746;biotype=protein_coding;description=Mitochondrial carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM46];external_name=Thaps16746;logic_name=jgi_thaps3 chr18 ensembl transcript 663699 664753 . - . ID=Thaps16746;Parent=Thaps16746;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 663699 664387 . - 0 ID=Thaps16746;Parent=Thaps16746;rank=2 chr18 . exon 663699 664387 . - . ID=Thaps16746.2;Parent=Thaps16746;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 664570 664753 . - 0 ID=Thaps16746;Parent=Thaps16746;rank=1 chr18 . exon 664570 664753 . - . ID=Thaps16746.1;Parent=Thaps16746;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 657756 658424 . - . ID=Thaps25408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM42];external_name=Thaps25408;logic_name=jgi_thaps3 chr18 ensembl transcript 657756 658424 . - . ID=Thaps25408;Parent=Thaps25408;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 657756 658424 . - 0 ID=Thaps25408;Parent=Thaps25408;rank=1 chr18 . exon 657756 658424 . - . ID=Thaps25408.1;Parent=Thaps25408;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 658991 660016 . - . ID=Thaps25409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM43];external_name=Thaps25409;logic_name=jgi_thaps3 chr18 ensembl transcript 658991 660016 . - . ID=Thaps25409;Parent=Thaps25409;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 658991 660016 . - 0 ID=Thaps25409;Parent=Thaps25409;rank=1 chr18 . exon 658991 660016 . - . ID=Thaps25409.1;Parent=Thaps25409;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 661691 662491 . - . ID=Thaps25412;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM45];external_name=Thaps25412;logic_name=jgi_thaps3 chr18 ensembl transcript 661691 662491 . - . ID=Thaps25412;Parent=Thaps25412;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 661691 662491 . - 0 ID=Thaps25412;Parent=Thaps25412;rank=1 chr18 . exon 661691 662491 . - . ID=Thaps25412.1;Parent=Thaps25412;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 660403 661194 . + . ID=Thaps269961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM44];external_name=Thaps269961;logic_name=jgi_thaps3 chr18 ensembl transcript 660403 661194 . + . ID=Thaps269961;Parent=Thaps269961;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 660403 661194 . + 0 ID=Thaps269961;Parent=Thaps269961;rank=1 chr18 . exon 660403 661194 . + . ID=Thaps269961.1;Parent=Thaps269961;constitutive=1;rank=1 chr18 . repeat_region 673751 673778 . ? . description=dust chr18 . repeat_region 673753 673778 . ? . description=trf chr18 . repeat_region 674094 674103 . ? . description=dust chr18 . repeat_region 674654 674711 . ? . description=trf chr18 . repeat_region 674852 674860 . ? . description=dust chr18 . repeat_region 677189 677197 . ? . description=dust chr18 ensembl protein_coding_gene 668821 670062 . - . ID=Thaps11005;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM48];external_name=Thaps11005;logic_name=jgi_thaps3 chr18 ensembl transcript 668821 670062 . - . ID=Thaps11005;Parent=Thaps11005;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 668821 669158 . - 0 ID=Thaps11005;Parent=Thaps11005;rank=3 chr18 . exon 668821 669158 . - . ID=Thaps11005.3;Parent=Thaps11005;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 669217 669348 . - 0 ID=Thaps11005;Parent=Thaps11005;rank=2 chr18 . exon 669217 669348 . - . ID=Thaps11005.2;Parent=Thaps11005;constitutive=1;rank=2 chr18 . CDS 669564 670062 . - 0 ID=Thaps11005;Parent=Thaps11005;rank=1 chr18 . exon 669564 670062 . - . ID=Thaps11005.1;Parent=Thaps11005;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 670879 671718 . + . ID=Thaps25414;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM49];external_name=Thaps25414;logic_name=jgi_thaps3 chr18 ensembl transcript 670879 671718 . + . ID=Thaps25414;Parent=Thaps25414;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 670879 671718 . + 0 ID=Thaps25414;Parent=Thaps25414;rank=1 chr18 . exon 670879 671718 . + . ID=Thaps25414.1;Parent=Thaps25414;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 672218 673909 . - . ID=Thaps25415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM50];external_name=Thaps25415;logic_name=jgi_thaps3 chr18 ensembl transcript 672218 673909 . - . ID=Thaps25415;Parent=Thaps25415;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 672218 673909 . - 0 ID=Thaps25415;Parent=Thaps25415;rank=1 chr18 . exon 672218 673909 . - . ID=Thaps25415.1;Parent=Thaps25415;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 677489 679235 . - . ID=Thaps25417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM52];external_name=Thaps25417;logic_name=jgi_thaps3 chr18 ensembl transcript 677489 679235 . - . ID=Thaps25417;Parent=Thaps25417;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 677489 678802 . - 0 ID=Thaps25417;Parent=Thaps25417;rank=2 chr18 . exon 677489 678802 . - . ID=Thaps25417.2;Parent=Thaps25417;constitutive=1;rank=2 chr18 . CDS 678858 679235 . - 0 ID=Thaps25417;Parent=Thaps25417;rank=1 chr18 ensembl protein_coding_gene 675754 677101 . + . ID=Thaps264546;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM51];external_name=Thaps264546;logic_name=jgi_thaps3 chr18 ensembl transcript 675754 677101 . + . ID=Thaps264546;Parent=Thaps264546;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 675754 675852 . + 0 ID=Thaps264546;Parent=Thaps264546;rank=1 chr18 . exon 675754 675852 . + . ID=Thaps264546.1;Parent=Thaps264546;constitutive=1;rank=1 chr18 . CDS 675925 676227 . + 0 ID=Thaps264546;Parent=Thaps264546;rank=2 chr18 . exon 675925 676227 . + . ID=Thaps264546.2;Parent=Thaps264546;constitutive=1;rank=2 chr18 . CDS 676668 676903 . + 0 ID=Thaps264546;Parent=Thaps264546;rank=3 chr18 . exon 676668 676903 . + . ID=Thaps264546.3;Parent=Thaps264546;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 676919 677101 . + 0 ID=Thaps264546;Parent=Thaps264546;rank=4 chr18 . exon 676919 677101 . + . ID=Thaps264546.4;Parent=Thaps264546;constitutive=1;rank=4 chr18 . biological_region 679645 679647 0.999 - . logic_name=eponine chr18 ensembl protein_coding_gene 682027 684243 . + . ID=Thaps11011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM54];external_name=Thaps11011;logic_name=jgi_thaps3 chr18 ensembl transcript 682027 684243 . + . ID=Thaps11011;Parent=Thaps11011;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 682027 684243 . + 0 ID=Thaps11011;Parent=Thaps11011;rank=1 chr18 . exon 682027 684243 . + . ID=Thaps11011.1;Parent=Thaps11011;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 680579 681706 . + . ID=Thaps14417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM53];external_name=Thaps14417;logic_name=jgi_thaps3 chr18 ensembl transcript 680579 681706 . + . ID=Thaps14417;Parent=Thaps14417;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 680579 681002 . + 0 ID=Thaps14417;Parent=Thaps14417;rank=1 chr18 . exon 680579 681002 . + . ID=Thaps14417.1;Parent=Thaps14417;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 681075 681706 . + 0 ID=Thaps14417;Parent=Thaps14417;rank=2 chr18 . exon 681075 681706 . + . ID=Thaps14417.2;Parent=Thaps14417;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . exon 678858 679235 . - . ID=Thaps25417.1;Parent=Thaps25417;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 685505 688186 . + . ID=Thaps264548;biotype=protein_coding;description=Elongation factor G [Source:UniProtKB/TrEMBL%3BAcc:B5YM55];external_name=Thaps264548;logic_name=jgi_thaps3 chr18 ensembl transcript 685505 688186 . + . ID=Thaps264548;Parent=Thaps264548;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 685505 685711 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=1 chr18 . exon 685505 685711 . + . ID=Thaps264548.1;Parent=Thaps264548;constitutive=1;rank=1 chr18 . CDS 685754 685886 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=2 chr18 . exon 685754 685886 . + . ID=Thaps264548.2;Parent=Thaps264548;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 685912 685922 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=3 chr18 . exon 685912 685922 . + . ID=Thaps264548.3;Parent=Thaps264548;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 685976 686108 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=4 chr18 . exon 685976 686108 . + . ID=Thaps264548.4;Parent=Thaps264548;constitutive=1;ensembl_end_phase=1;rank=4 chr18 . CDS 686196 686302 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=5 chr18 . exon 686196 686302 . + . ID=Thaps264548.5;Parent=Thaps264548;constitutive=1;ensembl_end_phase=2;rank=5 chr18 . CDS 686366 686478 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=6 chr18 . exon 686366 686478 . + . ID=Thaps264548.6;Parent=Thaps264548;constitutive=1;ensembl_end_phase=2;rank=6 chr18 . CDS 686497 686792 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=7 chr18 . exon 686497 686792 . + . ID=Thaps264548.7;Parent=Thaps264548;constitutive=1;ensembl_end_phase=2;rank=7 chr18 . CDS 686808 686869 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=8 chr18 . exon 686808 686869 . + . ID=Thaps264548.8;Parent=Thaps264548;constitutive=1;ensembl_end_phase=2;rank=8 chr18 . CDS 686927 687100 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=9 chr18 . exon 686927 687100 . + . ID=Thaps264548.9;Parent=Thaps264548;constitutive=1;rank=9 chr18 . CDS 687197 687583 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=10 chr18 . exon 687197 687583 . + . ID=Thaps264548.10;Parent=Thaps264548;constitutive=1;rank=10 chr18 . CDS 687692 688186 . + 0 ID=Thaps264548;Parent=Thaps264548;rank=11 chr18 . repeat_region 688882 688925 . ? . description=trf chr18 . repeat_region 690395 690449 . ? . description=dust chr18 . repeat_region 690420 690449 . ? . description=trf chr18 . repeat_region 690421 690545 . - . description=Harbinger2N_TP chr18 . repeat_region 690489 690542 . ? . description=dust chr18 . repeat_region 690491 690545 . ? . description=trf chr18 . repeat_region 690812 690838 . ? . description=trf chr18 . repeat_region 690812 690838 . ? . description=dust chr18 . repeat_region 691437 691456 . ? . description=trf chr18 . repeat_region 691437 691456 . ? . description=dust chr18 . repeat_region 694081 694106 . ? . description=trf chr18 . repeat_region 694081 694106 . ? . description=dust chr18 . repeat_region 695042 695049 . ? . description=dust chr18 ensembl protein_coding_gene 691309 695287 . + . ID=Thaps25419;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM56];external_name=Thaps25419;logic_name=jgi_thaps3 chr18 ensembl transcript 691309 695287 . + . ID=Thaps25419;Parent=Thaps25419;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 691309 694407 . + 0 ID=Thaps25419;Parent=Thaps25419;rank=1 chr18 . exon 691309 694407 . + . ID=Thaps25419.1;Parent=Thaps25419;constitutive=1;rank=1 chr18 . CDS 694492 694743 . + 0 ID=Thaps25419;Parent=Thaps25419;rank=2 chr18 . exon 694492 694743 . + . ID=Thaps25419.2;Parent=Thaps25419;constitutive=1;rank=2 chr18 . CDS 694832 695287 . + 0 ID=Thaps25419;Parent=Thaps25419;rank=3 chr18 . exon 694832 695287 . + . ID=Thaps25419.3;Parent=Thaps25419;constitutive=1;rank=3 chr18 ensembl protein_coding_gene 695438 696550 . - . ID=Thaps25420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM57];external_name=Thaps25420;logic_name=jgi_thaps3 chr18 ensembl transcript 695438 696550 . - . ID=Thaps25420;Parent=Thaps25420;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 695438 696550 . - 0 ID=Thaps25420;Parent=Thaps25420;rank=1 chr18 . exon 695438 696550 . - . ID=Thaps25420.1;Parent=Thaps25420;constitutive=1;rank=1 chr18 . exon 687692 688186 . + . ID=Thaps264548.11;Parent=Thaps264548;constitutive=1;rank=11 chr18 ensembl protein_coding_gene 702271 704458 . - . ID=Thaps25422;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM59];external_name=Thaps25422;logic_name=jgi_thaps3 chr18 ensembl transcript 702271 704458 . - . ID=Thaps25422;Parent=Thaps25422;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 702271 704010 . - 0 ID=Thaps25422;Parent=Thaps25422;rank=3 chr18 . exon 702271 704010 . - . ID=Thaps25422.3;Parent=Thaps25422;constitutive=1;rank=3 chr18 . CDS 704083 704134 . - 0 ID=Thaps25422;Parent=Thaps25422;rank=2 chr18 . exon 704083 704134 . - . ID=Thaps25422.2;Parent=Thaps25422;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 704241 704458 . - 0 ID=Thaps25422;Parent=Thaps25422;rank=1 chr18 . exon 704241 704458 . - . ID=Thaps25422.1;Parent=Thaps25422;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 705435 707462 . + . ID=Thaps25423;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM60];external_name=Thaps25423;logic_name=jgi_thaps3 chr18 ensembl transcript 705435 707462 . + . ID=Thaps25423;Parent=Thaps25423;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 705435 707462 . + 0 ID=Thaps25423;Parent=Thaps25423;rank=1 chr18 . exon 705435 707462 . + . ID=Thaps25423.1;Parent=Thaps25423;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 698097 701690 . + . ID=Thaps269966;biotype=protein_coding;description=Valyl-tRNA synthetase [Source:UniProtKB/TrEMBL%3BAcc:B5YM58];external_name=VTS1;logic_name=jgi_thaps3 chr18 ensembl transcript 698097 701690 . + . ID=Thaps269966;Parent=Thaps269966;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 698097 698158 . + 0 ID=Thaps269966;Parent=Thaps269966;rank=1 chr18 . exon 698097 698158 . + . ID=Thaps269966.1;Parent=Thaps269966;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 698261 698445 . + 0 ID=Thaps269966;Parent=Thaps269966;rank=2 chr18 . exon 698261 698445 . + . ID=Thaps269966.2;Parent=Thaps269966;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 698804 699969 . + 0 ID=Thaps269966;Parent=Thaps269966;rank=3 chr18 . exon 698804 699969 . + . ID=Thaps269966.3;Parent=Thaps269966;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 700053 700331 . + 0 ID=Thaps269966;Parent=Thaps269966;rank=4 chr18 . exon 700053 700331 . + . ID=Thaps269966.4;Parent=Thaps269966;constitutive=1;rank=4 chr18 . CDS 700413 701690 . + 0 ID=Thaps269966;Parent=Thaps269966;rank=5 chr18 . exon 700413 701690 . + . ID=Thaps269966.5;Parent=Thaps269966;constitutive=1;rank=5 chr18 . repeat_region 709201 709240 . ? . description=trf chr18 . repeat_region 709201 709240 . ? . description=dust chr18 . repeat_region 714774 714794 . ? . description=trf chr18 . repeat_region 714774 714794 . ? . description=dust chr18 ensembl protein_coding_gene 708258 709161 . + . ID=Thaps11018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM61];external_name=Thaps11018;logic_name=jgi_thaps3 chr18 ensembl transcript 708258 709161 . + . ID=Thaps11018;Parent=Thaps11018;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 708258 708574 . + 0 ID=Thaps11018;Parent=Thaps11018;rank=1 chr18 . exon 708258 708574 . + . ID=Thaps11018.1;Parent=Thaps11018;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 708870 709161 . + 0 ID=Thaps11018;Parent=Thaps11018;rank=2 chr18 . exon 708870 709161 . + . ID=Thaps11018.2;Parent=Thaps11018;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 710072 711070 . + . ID=Thaps11019;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM62];external_name=Thaps11019;logic_name=jgi_thaps3 chr18 ensembl transcript 710072 711070 . + . ID=Thaps11019;Parent=Thaps11019;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 710072 711070 . + 0 ID=Thaps11019;Parent=Thaps11019;rank=1 chr18 . exon 710072 711070 . + . ID=Thaps11019.1;Parent=Thaps11019;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 711552 711845 . - . ID=Thaps19895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM63];external_name=Thaps19895;logic_name=jgi_thaps3 chr18 ensembl transcript 711552 711845 . - . ID=Thaps19895;Parent=Thaps19895;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 711552 711845 . - 0 ID=Thaps19895;Parent=Thaps19895;rank=1 chr18 . exon 711552 711845 . - . ID=Thaps19895.1;Parent=Thaps19895;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 712222 713860 . - . ID=Thaps38047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM64];external_name=Thaps38047;logic_name=jgi_thaps3 chr18 ensembl transcript 712222 713860 . - . ID=Thaps38047;Parent=Thaps38047;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 712222 712389 . - 0 ID=Thaps38047;Parent=Thaps38047;rank=6 chr18 . exon 712222 712389 . - . ID=Thaps38047.6;Parent=Thaps38047;constitutive=1;rank=6 chr18 . CDS 712465 712505 . - 0 ID=Thaps38047;Parent=Thaps38047;rank=5 chr18 . exon 712465 712505 . - . ID=Thaps38047.5;Parent=Thaps38047;constitutive=1;ensembl_end_phase=2;rank=5 chr18 . CDS 712589 712926 . - 0 ID=Thaps38047;Parent=Thaps38047;rank=4 chr18 . exon 712589 712926 . - . ID=Thaps38047.4;Parent=Thaps38047;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 713032 713143 . - 0 ID=Thaps38047;Parent=Thaps38047;rank=3 chr18 . exon 713032 713143 . - . ID=Thaps38047.3;Parent=Thaps38047;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 713249 713324 . - 0 ID=Thaps38047;Parent=Thaps38047;rank=2 chr18 . exon 713249 713324 . - . ID=Thaps38047.2;Parent=Thaps38047;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 713762 713860 . - 0 ID=Thaps38047;Parent=Thaps38047;rank=1 chr18 . exon 713762 713860 . - . ID=Thaps38047.1;Parent=Thaps38047;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 717152 718708 . + . ID=Thaps42804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM65];external_name=Thaps42804;logic_name=jgi_thaps3 chr18 ensembl transcript 717152 718708 . + . ID=Thaps42804;Parent=Thaps42804;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 717152 718708 . + 0 ID=Thaps42804;Parent=Thaps42804;rank=1 chr18 . exon 717152 718708 . + . ID=Thaps42804.1;Parent=Thaps42804;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 726397 728362 . + . ID=Thaps11024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM68];external_name=Thaps11024;logic_name=jgi_thaps3 chr18 ensembl transcript 726397 728362 . + . ID=Thaps11024;Parent=Thaps11024;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 726397 726546 . + 0 ID=Thaps11024;Parent=Thaps11024;rank=1 chr18 . exon 726397 726546 . + . ID=Thaps11024.1;Parent=Thaps11024;constitutive=1;rank=1 chr18 . CDS 726622 726895 . + 0 ID=Thaps11024;Parent=Thaps11024;rank=2 chr18 . exon 726622 726895 . + . ID=Thaps11024.2;Parent=Thaps11024;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 727045 727712 . + 0 ID=Thaps11024;Parent=Thaps11024;rank=3 chr18 . exon 727045 727712 . + . ID=Thaps11024.3;Parent=Thaps11024;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 727802 728362 . + 0 ID=Thaps11024;Parent=Thaps11024;rank=4 chr18 ensembl protein_coding_gene 718907 720637 . - . ID=Thaps25426;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM66];external_name=Thaps25426;logic_name=jgi_thaps3 chr18 ensembl transcript 718907 720637 . - . ID=Thaps25426;Parent=Thaps25426;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 718907 720637 . - 0 ID=Thaps25426;Parent=Thaps25426;rank=1 chr18 . exon 718907 720637 . - . ID=Thaps25426.1;Parent=Thaps25426;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 723838 724218 . + . ID=Thaps269968;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM67];external_name=Thaps269968;logic_name=jgi_thaps3 chr18 ensembl transcript 723838 724218 . + . ID=Thaps269968;Parent=Thaps269968;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 723838 724218 . + 0 ID=Thaps269968;Parent=Thaps269968;rank=1 chr18 . exon 723838 724218 . + . ID=Thaps269968.1;Parent=Thaps269968;constitutive=1;rank=1 chr18 . repeat_region 729249 729308 . ? . description=trf chr18 . repeat_region 732188 732219 . ? . description=trf chr18 . repeat_region 733366 733395 . ? . description=trf chr18 . exon 727802 728362 . + . ID=Thaps11024.4;Parent=Thaps11024;constitutive=1;rank=4 chr18 ensembl protein_coding_gene 729027 730075 . + . ID=Thaps11025;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM69];external_name=Thaps11025;logic_name=jgi_thaps3 chr18 ensembl transcript 729027 730075 . + . ID=Thaps11025;Parent=Thaps11025;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 729027 729226 . + 0 ID=Thaps11025;Parent=Thaps11025;rank=1 chr18 . exon 729027 729226 . + . ID=Thaps11025.1;Parent=Thaps11025;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 729691 730075 . + 0 ID=Thaps11025;Parent=Thaps11025;rank=2 chr18 . exon 729691 730075 . + . ID=Thaps11025.2;Parent=Thaps11025;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 731018 731728 . + . ID=Thaps11026;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM70];external_name=Thaps11026;logic_name=jgi_thaps3 chr18 ensembl transcript 731018 731728 . + . ID=Thaps11026;Parent=Thaps11026;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 731018 731392 . + 0 ID=Thaps11026;Parent=Thaps11026;rank=1 chr18 . exon 731018 731392 . + . ID=Thaps11026.1;Parent=Thaps11026;constitutive=1;rank=1 chr18 . CDS 731447 731728 . + 0 ID=Thaps11026;Parent=Thaps11026;rank=2 chr18 . exon 731447 731728 . + . ID=Thaps11026.2;Parent=Thaps11026;constitutive=1;rank=2 chr18 ensembl protein_coding_gene 735441 736483 . - . ID=Thaps11028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM72];external_name=Thaps11028;logic_name=jgi_thaps3 chr18 ensembl transcript 735441 736483 . - . ID=Thaps11028;Parent=Thaps11028;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 735441 736004 . - 0 ID=Thaps11028;Parent=Thaps11028;rank=2 chr18 . exon 735441 736004 . - . ID=Thaps11028.2;Parent=Thaps11028;constitutive=1;rank=2 chr18 . CDS 736127 736483 . - 0 ID=Thaps11028;Parent=Thaps11028;rank=1 chr18 . exon 736127 736483 . - . ID=Thaps11028.1;Parent=Thaps11028;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 736816 740106 . + . ID=Thaps11029;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM73];external_name=Thaps11029;logic_name=jgi_thaps3 chr18 ensembl transcript 736816 740106 . + . ID=Thaps11029;Parent=Thaps11029;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 736816 737926 . + 0 ID=Thaps11029;Parent=Thaps11029;rank=1 chr18 . exon 736816 737926 . + . ID=Thaps11029.1;Parent=Thaps11029;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 738020 738841 . + 0 ID=Thaps11029;Parent=Thaps11029;rank=2 chr18 . CDS 738929 740106 . + 0 ID=Thaps11029;Parent=Thaps11029;rank=3 chr18 ensembl protein_coding_gene 731986 734676 . - . ID=Thaps25428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM71];external_name=Thaps25428;logic_name=jgi_thaps3 chr18 ensembl transcript 731986 734676 . - . ID=Thaps25428;Parent=Thaps25428;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 731986 734676 . - 0 ID=Thaps25428;Parent=Thaps25428;rank=1 chr18 . exon 731986 734676 . - . ID=Thaps25428.1;Parent=Thaps25428;constitutive=1;rank=1 chr18 . exon 738020 738841 . + . ID=Thaps11029.2;Parent=Thaps11029;constitutive=1;rank=2 chr18 . exon 738929 740106 . + . ID=Thaps11029.3;Parent=Thaps11029;constitutive=1;ensembl_end_phase=2;rank=3 chr18 ensembl protein_coding_gene 741303 744295 . - . ID=Thaps25429;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM74];external_name=Thaps25429;logic_name=jgi_thaps3 chr18 ensembl transcript 741303 744295 . - . ID=Thaps25429;Parent=Thaps25429;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 741303 741334 . - 0 ID=Thaps25429;Parent=Thaps25429;rank=3 chr18 . exon 741303 741334 . - . ID=Thaps25429.3;Parent=Thaps25429;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 741388 742461 . - 0 ID=Thaps25429;Parent=Thaps25429;rank=2 chr18 . exon 741388 742461 . - . ID=Thaps25429.2;Parent=Thaps25429;constitutive=1;rank=2 chr18 . CDS 742597 744295 . - 0 ID=Thaps25429;Parent=Thaps25429;rank=1 chr18 . exon 742597 744295 . - . ID=Thaps25429.1;Parent=Thaps25429;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 745108 747618 . + . ID=Thaps25430;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM75];external_name=Thaps25430;logic_name=jgi_thaps3 chr18 ensembl transcript 745108 747618 . + . ID=Thaps25430;Parent=Thaps25430;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 745108 747618 . + 0 ID=Thaps25430;Parent=Thaps25430;rank=1 chr18 . exon 745108 747618 . + . ID=Thaps25430.1;Parent=Thaps25430;constitutive=1;rank=1 chr18 . repeat_region 751606 751641 . ? . description=trf chr18 . repeat_region 751610 751641 . ? . description=trf chr18 . repeat_region 751610 751641 . ? . description=trf chr18 ensembl protein_coding_gene 753315 755334 . - . ID=Thaps11034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM78];external_name=Thaps11034;logic_name=jgi_thaps3 chr18 ensembl transcript 753315 755334 . - . ID=Thaps11034;Parent=Thaps11034;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 753315 753847 . - 0 ID=Thaps11034;Parent=Thaps11034;rank=3 chr18 . exon 753315 753847 . - . ID=Thaps11034.3;Parent=Thaps11034;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 753921 754100 . - 0 ID=Thaps11034;Parent=Thaps11034;rank=2 chr18 . exon 753921 754100 . - . ID=Thaps11034.2;Parent=Thaps11034;constitutive=1;rank=2 chr18 . CDS 754197 755334 . - 0 ID=Thaps11034;Parent=Thaps11034;rank=1 chr18 . exon 754197 755334 . - . ID=Thaps11034.1;Parent=Thaps11034;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 755816 757218 . - . ID=Thaps25432;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM79];external_name=Thaps25432;logic_name=jgi_thaps3 chr18 ensembl transcript 755816 757218 . - . ID=Thaps25432;Parent=Thaps25432;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 755816 756784 . - 0 ID=Thaps25432;Parent=Thaps25432;rank=2 chr18 . exon 755816 756784 . - . ID=Thaps25432.2;Parent=Thaps25432;constitutive=1;rank=2 chr18 . CDS 756916 757218 . - 0 ID=Thaps25432;Parent=Thaps25432;rank=1 chr18 . exon 756916 757218 . - . ID=Thaps25432.1;Parent=Thaps25432;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 749001 749213 . - . ID=Thaps38039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM76];external_name=Thaps38039;logic_name=jgi_thaps3 chr18 ensembl transcript 749001 749213 . - . ID=Thaps38039;Parent=Thaps38039;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 749001 749213 . - 0 ID=Thaps38039;Parent=Thaps38039;rank=1 chr18 . exon 749001 749213 . - . ID=Thaps38039.1;Parent=Thaps38039;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 750396 751656 . - . ID=Thaps38143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM77];external_name=Thaps38143;logic_name=jgi_thaps3 chr18 ensembl transcript 750396 751656 . - . ID=Thaps38143;Parent=Thaps38143;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 750396 750594 . - 0 ID=Thaps38143;Parent=Thaps38143;rank=3 chr18 . exon 750396 750594 . - . ID=Thaps38143.3;Parent=Thaps38143;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 750677 751223 . - 0 ID=Thaps38143;Parent=Thaps38143;rank=2 chr18 . exon 750677 751223 . - . ID=Thaps38143.2;Parent=Thaps38143;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 751278 751656 . - 0 ID=Thaps38143;Parent=Thaps38143;rank=1 chr18 . exon 751278 751656 . - . ID=Thaps38143.1;Parent=Thaps38143;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . repeat_region 762383 762412 . ? . description=dust chr18 . repeat_region 765241 765251 . ? . description=dust chr18 ensembl protein_coding_gene 759224 761587 . + . ID=Thaps11037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM81];external_name=Thaps11037;logic_name=jgi_thaps3 chr18 ensembl transcript 759224 761587 . + . ID=Thaps11037;Parent=Thaps11037;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 759224 759389 . + 0 ID=Thaps11037;Parent=Thaps11037;rank=1 chr18 . exon 759224 759389 . + . ID=Thaps11037.1;Parent=Thaps11037;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 759419 760741 . + 0 ID=Thaps11037;Parent=Thaps11037;rank=2 chr18 . exon 759419 760741 . + . ID=Thaps11037.2;Parent=Thaps11037;constitutive=1;rank=2 chr18 . CDS 760821 760921 . + 0 ID=Thaps11037;Parent=Thaps11037;rank=3 chr18 . exon 760821 760921 . + . ID=Thaps11037.3;Parent=Thaps11037;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 761005 761139 . + 0 ID=Thaps11037;Parent=Thaps11037;rank=4 chr18 . exon 761005 761139 . + . ID=Thaps11037.4;Parent=Thaps11037;constitutive=1;rank=4 chr18 . CDS 761210 761587 . + 0 ID=Thaps11037;Parent=Thaps11037;rank=5 chr18 . exon 761210 761587 . + . ID=Thaps11037.5;Parent=Thaps11037;constitutive=1;rank=5 chr18 ensembl protein_coding_gene 762625 764894 . - . ID=Thaps11038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM82];external_name=Thaps11038;logic_name=jgi_thaps3 chr18 ensembl transcript 762625 764894 . - . ID=Thaps11038;Parent=Thaps11038;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 762625 764416 . - 0 ID=Thaps11038;Parent=Thaps11038;rank=3 chr18 . exon 762625 764416 . - . ID=Thaps11038.3;Parent=Thaps11038;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 764624 764791 . - 0 ID=Thaps11038;Parent=Thaps11038;rank=2 chr18 . exon 764624 764791 . - . ID=Thaps11038.2;Parent=Thaps11038;constitutive=1;rank=2 chr18 . CDS 764845 764894 . - 0 ID=Thaps11038;Parent=Thaps11038;rank=1 chr18 . exon 764845 764894 . - . ID=Thaps11038.1;Parent=Thaps11038;constitutive=1;ensembl_end_phase=2;rank=1 chr18 ensembl protein_coding_gene 765761 767542 . + . ID=Thaps11039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM83];external_name=Thaps11039;logic_name=jgi_thaps3 chr18 ensembl transcript 765761 767542 . + . ID=Thaps11039;Parent=Thaps11039;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 765761 767542 . + 0 ID=Thaps11039;Parent=Thaps11039;rank=1 chr18 . exon 765761 767542 . + . ID=Thaps11039.1;Parent=Thaps11039;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 758074 758577 . - . ID=Thaps38139;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c light-harvesting protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM80];external_name=LHCR5;logic_name=jgi_thaps3 chr18 ensembl transcript 758074 758577 . - . ID=Thaps38139;Parent=Thaps38139;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 758074 758577 . - 0 ID=Thaps38139;Parent=Thaps38139;rank=1 chr18 . exon 758074 758577 . - . ID=Thaps38139.1;Parent=Thaps38139;constitutive=1;rank=1 chr18 . repeat_region 769100 769127 . ? . description=trf chr18 ensembl protein_coding_gene 771298 772674 . + . ID=Thaps11041;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM85];external_name=Thaps11041;logic_name=jgi_thaps3 chr18 ensembl transcript 771298 772674 . + . ID=Thaps11041;Parent=Thaps11041;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 771298 772674 . + 0 ID=Thaps11041;Parent=Thaps11041;rank=1 chr18 . exon 771298 772674 . + . ID=Thaps11041.1;Parent=Thaps11041;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 767671 770232 . - . ID=Thaps25434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM84];external_name=Thaps25434;logic_name=jgi_thaps3 chr18 ensembl transcript 767671 770232 . - . ID=Thaps25434;Parent=Thaps25434;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 767671 768605 . - 0 ID=Thaps25434;Parent=Thaps25434;rank=4 chr18 . exon 767671 768605 . - . ID=Thaps25434.4;Parent=Thaps25434;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 768687 769565 . - 0 ID=Thaps25434;Parent=Thaps25434;rank=3 chr18 . exon 768687 769565 . - . ID=Thaps25434.3;Parent=Thaps25434;constitutive=1;rank=3 chr18 . CDS 769681 769821 . - 0 ID=Thaps25434;Parent=Thaps25434;rank=2 chr18 . exon 769681 769821 . - . ID=Thaps25434.2;Parent=Thaps25434;constitutive=1;rank=2 chr18 . CDS 769935 770232 . - 0 ID=Thaps25434;Parent=Thaps25434;rank=1 chr18 . exon 769935 770232 . - . ID=Thaps25434.1;Parent=Thaps25434;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 774837 777459 . - . ID=Thaps25435;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM87];external_name=Thaps25435;logic_name=jgi_thaps3 chr18 ensembl transcript 774837 777459 . - . ID=Thaps25435;Parent=Thaps25435;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 774837 775412 . - 0 ID=Thaps25435;Parent=Thaps25435;rank=6 chr18 . exon 774837 775412 . - . ID=Thaps25435.6;Parent=Thaps25435;constitutive=1;rank=6 chr18 . CDS 775505 775711 . - 0 ID=Thaps25435;Parent=Thaps25435;rank=5 chr18 . exon 775505 775711 . - . ID=Thaps25435.5;Parent=Thaps25435;constitutive=1;rank=5 chr18 . CDS 775815 775889 . - 0 ID=Thaps25435;Parent=Thaps25435;rank=4 chr18 . exon 775815 775889 . - . ID=Thaps25435.4;Parent=Thaps25435;constitutive=1;rank=4 chr18 . CDS 775963 776007 . - 0 ID=Thaps25435;Parent=Thaps25435;rank=3 chr18 . exon 775963 776007 . - . ID=Thaps25435.3;Parent=Thaps25435;constitutive=1;rank=3 chr18 . CDS 776097 776803 . - 0 ID=Thaps25435;Parent=Thaps25435;rank=2 chr18 . exon 776097 776803 . - . ID=Thaps25435.2;Parent=Thaps25435;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 776940 777459 . - 0 ID=Thaps25435;Parent=Thaps25435;rank=1 chr18 . exon 776940 777459 . - . ID=Thaps25435.1;Parent=Thaps25435;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 772989 774176 . - . ID=Thaps38123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM86];external_name=Thaps38123;logic_name=jgi_thaps3 chr18 ensembl transcript 772989 774176 . - . ID=Thaps38123;Parent=Thaps38123;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 772989 773246 . - 0 ID=Thaps38123;Parent=Thaps38123;rank=3 chr18 . exon 772989 773246 . - . ID=Thaps38123.3;Parent=Thaps38123;constitutive=1;rank=3 chr18 . CDS 773292 773732 . - 0 ID=Thaps38123;Parent=Thaps38123;rank=2 chr18 . exon 773292 773732 . - . ID=Thaps38123.2;Parent=Thaps38123;constitutive=1;rank=2 chr18 . CDS 774033 774176 . - 0 ID=Thaps38123;Parent=Thaps38123;rank=1 chr18 . exon 774033 774176 . - . ID=Thaps38123.1;Parent=Thaps38123;constitutive=1;rank=1 chr18 . repeat_region 780791 780812 . ? . description=dust chr18 . repeat_region 783206 783228 . ? . description=dust chr18 . repeat_region 786532 786539 . ? . description=dust chr18 ensembl protein_coding_gene 780837 783326 . + . ID=Thaps11045;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM89];external_name=Thaps11045;logic_name=jgi_thaps3 chr18 ensembl transcript 780837 783326 . + . ID=Thaps11045;Parent=Thaps11045;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 780837 783326 . + 0 ID=Thaps11045;Parent=Thaps11045;rank=1 chr18 . exon 780837 783326 . + . ID=Thaps11045.1;Parent=Thaps11045;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 778039 780407 . + . ID=Thaps25436;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM88];external_name=Thaps25436;logic_name=jgi_thaps3 chr18 ensembl transcript 778039 780407 . + . ID=Thaps25436;Parent=Thaps25436;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 778039 778046 . + 0 ID=Thaps25436;Parent=Thaps25436;rank=1 chr18 . exon 778039 778046 . + . ID=Thaps25436.1;Parent=Thaps25436;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 778229 780407 . + 0 ID=Thaps25436;Parent=Thaps25436;rank=2 chr18 . exon 778229 780407 . + . ID=Thaps25436.2;Parent=Thaps25436;constitutive=1;ensembl_end_phase=1;rank=2 chr18 ensembl protein_coding_gene 787015 790071 . + . ID=Thaps25438;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM91];external_name=Thaps25438;logic_name=jgi_thaps3 chr18 ensembl transcript 787015 790071 . + . ID=Thaps25438;Parent=Thaps25438;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 787015 787400 . + 0 ID=Thaps25438;Parent=Thaps25438;rank=1 chr18 . exon 787015 787400 . + . ID=Thaps25438.1;Parent=Thaps25438;constitutive=1;ensembl_end_phase=2;rank=1 chr18 . CDS 787651 788788 . + 0 ID=Thaps25438;Parent=Thaps25438;rank=2 chr18 . CDS 788905 790071 . + 0 ID=Thaps25438;Parent=Thaps25438;rank=3 chr18 ensembl protein_coding_gene 785195 786370 . + . ID=Thaps264556;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM90];external_name=Thaps264556;logic_name=jgi_thaps3 chr18 ensembl transcript 785195 786370 . + . ID=Thaps264556;Parent=Thaps264556;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 785195 785446 . + 0 ID=Thaps264556;Parent=Thaps264556;rank=1 chr18 . exon 785195 785446 . + . ID=Thaps264556.1;Parent=Thaps264556;constitutive=1;rank=1 chr18 . CDS 785495 785685 . + 0 ID=Thaps264556;Parent=Thaps264556;rank=2 chr18 . exon 785495 785685 . + . ID=Thaps264556.2;Parent=Thaps264556;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 785803 786214 . + 0 ID=Thaps264556;Parent=Thaps264556;rank=3 chr18 . exon 785803 786214 . + . ID=Thaps264556.3;Parent=Thaps264556;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . CDS 786273 786282 . + 0 ID=Thaps264556;Parent=Thaps264556;rank=4 chr18 . exon 786273 786282 . + . ID=Thaps264556.4;Parent=Thaps264556;constitutive=1;ensembl_end_phase=1;rank=4 chr18 . CDS 786300 786370 . + 0 ID=Thaps264556;Parent=Thaps264556;rank=5 chr18 . exon 786300 786370 . + . ID=Thaps264556.5;Parent=Thaps264556;constitutive=1;ensembl_end_phase=2;rank=5 chr18 . repeat_region 787982 788017 . ? . description=trf chr18 . repeat_region 794556 794607 . ? . description=trf chr18 . repeat_region 794815 794845 . ? . description=trf chr18 . repeat_region 796510 796543 . ? . description=trf chr18 . repeat_region 796510 796545 . ? . description=trf chr18 ensembl protein_coding_gene 790380 792833 . - . ID=Thaps11048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM92];external_name=Thaps11048;logic_name=jgi_thaps3 chr18 ensembl transcript 790380 792833 . - . ID=Thaps11048;Parent=Thaps11048;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 790380 792833 . - 0 ID=Thaps11048;Parent=Thaps11048;rank=1 chr18 . exon 790380 792833 . - . ID=Thaps11048.1;Parent=Thaps11048;constitutive=1;rank=1 chr18 . exon 787651 788788 . + . ID=Thaps25438.2;Parent=Thaps25438;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . exon 788905 790071 . + . ID=Thaps25438.3;Parent=Thaps25438;constitutive=1;rank=3 chr18 ensembl protein_coding_gene 793282 794961 . - . ID=Thaps25439;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM93];external_name=Thaps25439;logic_name=jgi_thaps3 chr18 ensembl transcript 793282 794961 . - . ID=Thaps25439;Parent=Thaps25439;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 793282 794069 . - 0 ID=Thaps25439;Parent=Thaps25439;rank=5 chr18 . exon 793282 794069 . - . ID=Thaps25439.5;Parent=Thaps25439;constitutive=1;ensembl_end_phase=2;rank=5 chr18 . CDS 794167 794237 . - 0 ID=Thaps25439;Parent=Thaps25439;rank=4 chr18 . exon 794167 794237 . - . ID=Thaps25439.4;Parent=Thaps25439;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . CDS 794323 794387 . - 0 ID=Thaps25439;Parent=Thaps25439;rank=3 chr18 . exon 794323 794387 . - . ID=Thaps25439.3;Parent=Thaps25439;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 794469 794789 . - 0 ID=Thaps25439;Parent=Thaps25439;rank=2 chr18 . exon 794469 794789 . - . ID=Thaps25439.2;Parent=Thaps25439;constitutive=1;rank=2 chr18 . CDS 794911 794961 . - 0 ID=Thaps25439;Parent=Thaps25439;rank=1 chr18 . exon 794911 794961 . - . ID=Thaps25439.1;Parent=Thaps25439;constitutive=1;rank=1 chr18 ensembl protein_coding_gene 797156 801107 . + . ID=Thaps25440;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM94];external_name=Thaps25440;logic_name=jgi_thaps3 chr18 ensembl transcript 797156 801107 . + . ID=Thaps25440;Parent=Thaps25440;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 797156 799285 . + 0 ID=Thaps25440;Parent=Thaps25440;rank=1 chr18 . exon 797156 799285 . + . ID=Thaps25440.1;Parent=Thaps25440;constitutive=1;rank=1 chr18 . CDS 799384 799401 . + 0 ID=Thaps25440;Parent=Thaps25440;rank=2 chr18 . CDS 799482 801107 . + 0 ID=Thaps25440;Parent=Thaps25440;rank=3 chr18 ensembl protein_coding_gene 805063 805659 . + . ID=Thaps11052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM96];external_name=Thaps11052;logic_name=jgi_thaps3 chr18 ensembl transcript 805063 805659 . + . ID=Thaps11052;Parent=Thaps11052;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 805063 805659 . + 0 ID=Thaps11052;Parent=Thaps11052;rank=1 chr18 . exon 805063 805659 . + . ID=Thaps11052.1;Parent=Thaps11052;constitutive=1;rank=1 chr18 . exon 799384 799401 . + . ID=Thaps25440.2;Parent=Thaps25440;constitutive=1;rank=2 chr18 . exon 799482 801107 . + . ID=Thaps25440.3;Parent=Thaps25440;constitutive=1;rank=3 chr18 ensembl protein_coding_gene 802291 803698 . - . ID=Thaps25441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM95];external_name=Thaps25441;logic_name=jgi_thaps3 chr18 ensembl transcript 802291 803698 . - . ID=Thaps25441;Parent=Thaps25441;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 802291 802527 . - 0 ID=Thaps25441;Parent=Thaps25441;rank=3 chr18 . exon 802291 802527 . - . ID=Thaps25441.3;Parent=Thaps25441;constitutive=1;rank=3 chr18 . CDS 802616 802926 . - 0 ID=Thaps25441;Parent=Thaps25441;rank=2 chr18 . exon 802616 802926 . - . ID=Thaps25441.2;Parent=Thaps25441;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 803047 803698 . - 0 ID=Thaps25441;Parent=Thaps25441;rank=1 chr18 . exon 803047 803698 . - . ID=Thaps25441.1;Parent=Thaps25441;constitutive=1;ensembl_end_phase=1;rank=1 chr18 ensembl protein_coding_gene 806386 810362 . + . ID=Thaps25442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM97];external_name=Thaps25442;logic_name=jgi_thaps3 chr18 ensembl transcript 806386 810362 . + . ID=Thaps25442;Parent=Thaps25442;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 806386 806707 . + 0 ID=Thaps25442;Parent=Thaps25442;rank=1 chr18 . exon 806386 806707 . + . ID=Thaps25442.1;Parent=Thaps25442;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 806906 808176 . + 0 ID=Thaps25442;Parent=Thaps25442;rank=2 chr18 . exon 806906 808176 . + . ID=Thaps25442.2;Parent=Thaps25442;constitutive=1;ensembl_end_phase=2;rank=2 chr18 . CDS 808269 808331 . + 0 ID=Thaps25442;Parent=Thaps25442;rank=3 chr18 . CDS 808420 808541 . + 0 ID=Thaps25442;Parent=Thaps25442;rank=4 chr18 . CDS 808620 808694 . + 0 ID=Thaps25442;Parent=Thaps25442;rank=5 chr18 . CDS 808784 809667 . + 0 ID=Thaps25442;Parent=Thaps25442;rank=6 chr18 . CDS 809753 809812 . + 0 ID=Thaps25442;Parent=Thaps25442;rank=7 chr18 . CDS 809905 809918 . + 0 ID=Thaps25442;Parent=Thaps25442;rank=8 chr18 . CDS 809997 810362 . + 0 ID=Thaps25442;Parent=Thaps25442;rank=9 chr18 . repeat_region 814764 814772 . ? . description=dust chr18 . repeat_region 814785 814815 . ? . description=trf chr18 . repeat_region 814802 814865 . ? . description=dust chr18 . repeat_region 815103 816165 . ? . description=dust chr18 . repeat_region 815106 816165 . ? . description=trf chr18 . repeat_region 815107 815509 . + . description=Harbinger2N_TP chr18 . repeat_region 815163 816166 . ? . description=trf chr18 . repeat_region 815567 816008 . + . description=Harbinger2N_TP chr18 . repeat_region 816009 816164 . + . description=Harbinger2N_TP chr18 . repeat_region 816878 816928 . ? . description=trf chr18 ensembl protein_coding_gene 812109 813347 . + . ID=Thaps11054;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM98];external_name=Thaps11054;logic_name=jgi_thaps3 chr18 ensembl transcript 812109 813347 . + . ID=Thaps11054;Parent=Thaps11054;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 812109 812844 . + 0 ID=Thaps11054;Parent=Thaps11054;rank=1 chr18 . exon 812109 812844 . + . ID=Thaps11054.1;Parent=Thaps11054;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 812956 813347 . + 0 ID=Thaps11054;Parent=Thaps11054;rank=2 chr18 . exon 812956 813347 . + . ID=Thaps11054.2;Parent=Thaps11054;constitutive=1;ensembl_end_phase=2;rank=2 chr18 ensembl protein_coding_gene 813677 814911 . + . ID=Thaps11055;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YM99];external_name=Thaps11055;logic_name=jgi_thaps3 chr18 ensembl transcript 813677 814911 . + . ID=Thaps11055;Parent=Thaps11055;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 813677 813755 . + 0 ID=Thaps11055;Parent=Thaps11055;rank=1 chr18 . exon 813677 813755 . + . ID=Thaps11055.1;Parent=Thaps11055;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 813810 814458 . + 0 ID=Thaps11055;Parent=Thaps11055;rank=2 chr18 . exon 813810 814458 . + . ID=Thaps11055.2;Parent=Thaps11055;constitutive=1;ensembl_end_phase=1;rank=2 chr18 . CDS 814881 814911 . + 0 ID=Thaps11055;Parent=Thaps11055;rank=3 chr18 . exon 814881 814911 . + . ID=Thaps11055.3;Parent=Thaps11055;constitutive=1;ensembl_end_phase=1;rank=3 chr18 . exon 808269 808331 . + . ID=Thaps25442.3;Parent=Thaps25442;constitutive=1;rank=3 chr18 . exon 808420 808541 . + . ID=Thaps25442.4;Parent=Thaps25442;constitutive=1;ensembl_end_phase=2;rank=4 chr18 . exon 808620 808694 . + . ID=Thaps25442.5;Parent=Thaps25442;constitutive=1;rank=5 chr18 . exon 808784 809667 . + . ID=Thaps25442.6;Parent=Thaps25442;constitutive=1;ensembl_end_phase=2;rank=6 chr18 . exon 809753 809812 . + . ID=Thaps25442.7;Parent=Thaps25442;constitutive=1;rank=7 chr18 . exon 809905 809918 . + . ID=Thaps25442.8;Parent=Thaps25442;constitutive=1;ensembl_end_phase=2;rank=8 chr18 . exon 809997 810362 . + . ID=Thaps25442.9;Parent=Thaps25442;constitutive=1;rank=9 chr18 . repeat_region 822066 822214 . + . description=SAT1_TP chr18 . repeat_region 822215 822388 . + . description=SAT1_TP chr18 . repeat_region 822389 822562 . + . description=SAT1_TP chr18 . repeat_region 822563 822736 . + . description=SAT1_TP chr18 . repeat_region 822737 822910 . + . description=SAT1_TP chr18 . repeat_region 822911 823084 . + . description=SAT1_TP chr18 ensembl protein_coding_gene 824035 825295 . + . ID=Thaps11057;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMA1];external_name=Thaps11057;logic_name=jgi_thaps3 chr18 ensembl transcript 824035 825295 . + . ID=Thaps11057;Parent=Thaps11057;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 824035 824065 . + 0 ID=Thaps11057;Parent=Thaps11057;rank=1 chr18 . exon 824035 824065 . + . ID=Thaps11057.1;Parent=Thaps11057;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . CDS 824170 824193 . + 0 ID=Thaps11057;Parent=Thaps11057;rank=2 chr18 . exon 824170 824193 . + . ID=Thaps11057.2;Parent=Thaps11057;constitutive=1;rank=2 chr18 . CDS 824245 824309 . + 0 ID=Thaps11057;Parent=Thaps11057;rank=3 chr18 . exon 824245 824309 . + . ID=Thaps11057.3;Parent=Thaps11057;constitutive=1;ensembl_end_phase=2;rank=3 chr18 . CDS 824409 824417 . + 0 ID=Thaps11057;Parent=Thaps11057;rank=4 chr18 . exon 824409 824417 . + . ID=Thaps11057.4;Parent=Thaps11057;constitutive=1;rank=4 chr18 . CDS 824510 824666 . + 0 ID=Thaps11057;Parent=Thaps11057;rank=5 chr18 . exon 824510 824666 . + . ID=Thaps11057.5;Parent=Thaps11057;constitutive=1;ensembl_end_phase=1;rank=5 chr18 . CDS 824796 824909 . + 0 ID=Thaps11057;Parent=Thaps11057;rank=6 chr18 . exon 824796 824909 . + . ID=Thaps11057.6;Parent=Thaps11057;constitutive=1;rank=6 chr18 . CDS 825006 825295 . + 0 ID=Thaps11057;Parent=Thaps11057;rank=7 chr18 . exon 825006 825295 . + . ID=Thaps11057.7;Parent=Thaps11057;constitutive=1;ensembl_end_phase=2;rank=7 chr18 ensembl protein_coding_gene 817161 817892 . + . ID=Thaps25443;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMA0];external_name=Thaps25443;logic_name=jgi_thaps3 chr18 ensembl transcript 817161 817892 . + . ID=Thaps25443;Parent=Thaps25443;biotype=protein_coding;logic_name=jgi_thaps3 chr18 . CDS 817161 817892 . + 0 ID=Thaps25443;Parent=Thaps25443;rank=1 chr18 . exon 817161 817892 . + . ID=Thaps25443.1;Parent=Thaps25443;constitutive=1;rank=1 chr18 ensembl gene 821961 823208 . + . ID=Thaps264557;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr18 ensembl transcript 821961 823208 . + . ID=Thaps264557;Parent=Thaps264557;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr18 . exon 821961 822312 . + . ID=Thaps264557.1;Parent=Thaps264557;constitutive=1;ensembl_end_phase=1;rank=1 chr18 . exon 822925 823208 . + . ID=Thaps264557.2;Parent=Thaps264557;constitutive=1;ensembl_end_phase=2;rank=2 ##gff-version 3 ##sequence-region 15 1 931268 chr15 . repeat_region 1 88 . ? . description=trf chr15 . repeat_region 1 88 . ? . description=dust chr15 ensembl protein_coding_gene 2462 3777 . + . ID=Thaps10012;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCY6];external_name=Thaps10012;logic_name=jgi_thaps3 chr15 ensembl transcript 2462 3777 . + . ID=Thaps10012;Parent=Thaps10012;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 2462 3060 . + 0 ID=Thaps10012;Parent=Thaps10012;rank=1 chr15 . exon 2462 3060 . + . ID=Thaps10012.1;Parent=Thaps10012;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 3147 3777 . + 0 ID=Thaps10012;Parent=Thaps10012;rank=2 chr15 . exon 3147 3777 . + . ID=Thaps10012.2;Parent=Thaps10012;constitutive=1;ensembl_end_phase=1;rank=2 chr15 ensembl protein_coding_gene 5045 6058 . + . ID=Thaps10013;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCY7];external_name=Thaps10013;logic_name=jgi_thaps3 chr15 ensembl transcript 5045 6058 . + . ID=Thaps10013;Parent=Thaps10013;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 5045 6058 . + 0 ID=Thaps10013;Parent=Thaps10013;rank=1 chr15 . exon 5045 6058 . + . ID=Thaps10013.1;Parent=Thaps10013;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 320 2114 . - . ID=Thaps24947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCY5];external_name=Thaps24947;logic_name=jgi_thaps3 chr15 ensembl transcript 320 2114 . - . ID=Thaps24947;Parent=Thaps24947;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 320 967 . - 0 ID=Thaps24947;Parent=Thaps24947;rank=3 chr15 . exon 320 967 . - . ID=Thaps24947.3;Parent=Thaps24947;constitutive=1;rank=3 chr15 . CDS 1072 1111 . - 0 ID=Thaps24947;Parent=Thaps24947;rank=2 chr15 . exon 1072 1111 . - . ID=Thaps24947.2;Parent=Thaps24947;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 1336 2114 . - 0 ID=Thaps24947;Parent=Thaps24947;rank=1 chr15 . exon 1336 2114 . - . ID=Thaps24947.1;Parent=Thaps24947;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 7102 9732 . + . ID=Thaps24949;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCY8];external_name=Thaps24949;logic_name=jgi_thaps3 chr15 ensembl transcript 7102 9732 . + . ID=Thaps24949;Parent=Thaps24949;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 7102 9732 . + 0 ID=Thaps24949;Parent=Thaps24949;rank=1 chr15 . exon 7102 9732 . + . ID=Thaps24949.1;Parent=Thaps24949;constitutive=1;rank=1 chr15 . repeat_region 13188 13245 . + . description=tp9_ASNotSingleton chr15 . repeat_region 17366 17481 . - . description=tp16_ASNotSingleton chr15 . repeat_region 18776 18874 . - . description=Harbinger2N_TP chr15 ensembl protein_coding_gene 12104 13009 . - . ID=Thaps10016;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ0];external_name=Thaps10016;logic_name=jgi_thaps3 chr15 ensembl transcript 12104 13009 . - . ID=Thaps10016;Parent=Thaps10016;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 12104 13009 . - 0 ID=Thaps10016;Parent=Thaps10016;rank=1 chr15 . exon 12104 13009 . - . ID=Thaps10016.1;Parent=Thaps10016;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 14577 15482 . + . ID=Thaps10017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ1];external_name=Thaps10017;logic_name=jgi_thaps3 chr15 ensembl transcript 14577 15482 . + . ID=Thaps10017;Parent=Thaps10017;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 14577 15482 . + 0 ID=Thaps10017;Parent=Thaps10017;rank=1 chr15 . exon 14577 15482 . + . ID=Thaps10017.1;Parent=Thaps10017;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 18023 18571 . + . ID=Thaps10018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ2];external_name=Thaps10018;logic_name=jgi_thaps3 chr15 ensembl transcript 18023 18571 . + . ID=Thaps10018;Parent=Thaps10018;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 18023 18571 . + 0 ID=Thaps10018;Parent=Thaps10018;rank=1 chr15 . exon 18023 18571 . + . ID=Thaps10018.1;Parent=Thaps10018;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 11001 11822 . + . ID=Thaps24950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCY9];external_name=Thaps24950;logic_name=jgi_thaps3 chr15 ensembl transcript 11001 11822 . + . ID=Thaps24950;Parent=Thaps24950;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 11001 11822 . + 0 ID=Thaps24950;Parent=Thaps24950;rank=1 chr15 . exon 11001 11822 . + . ID=Thaps24950.1;Parent=Thaps24950;constitutive=1;rank=1 chr15 . repeat_region 20073 23784 . + . description=Harbinger4_TP chr15 . repeat_region 22047 22089 . ? . description=trf chr15 . repeat_region 23601 23609 . ? . description=dust chr15 . repeat_region 25125 25138 . ? . description=dust chr15 . repeat_region 27404 27422 . ? . description=dust chr15 ensembl protein_coding_gene 28001 28873 . + . ID=Thaps24952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ3];external_name=Thaps24952;logic_name=jgi_thaps3 chr15 ensembl transcript 28001 28873 . + . ID=Thaps24952;Parent=Thaps24952;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 28001 28873 . + 0 ID=Thaps24952;Parent=Thaps24952;rank=1 chr15 . exon 28001 28873 . + . ID=Thaps24952.1;Parent=Thaps24952;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 29322 30143 . - . ID=Thaps24953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ4];external_name=Thaps24953;logic_name=jgi_thaps3 chr15 ensembl transcript 29322 30143 . - . ID=Thaps24953;Parent=Thaps24953;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 29322 30143 . - 0 ID=Thaps24953;Parent=Thaps24953;rank=1 chr15 . exon 29322 30143 . - . ID=Thaps24953.1;Parent=Thaps24953;constitutive=1;rank=1 chr15 . repeat_region 32445 33152 . - . description=Copia7I_TP chr15 . biological_region 32983 32987 0.999 + . logic_name=eponine chr15 . repeat_region 35921 37460 . + . description=tp3_ASNotSingleton chr15 . repeat_region 37649 37811 . - . description=Copia7I_TP chr15 ensembl protein_coding_gene 33166 33723 . + . ID=Thaps10023;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ6];external_name=Thaps10023;logic_name=jgi_thaps3 chr15 ensembl transcript 33166 33723 . + . ID=Thaps10023;Parent=Thaps10023;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 33166 33723 . + 0 ID=Thaps10023;Parent=Thaps10023;rank=1 chr15 . exon 33166 33723 . + . ID=Thaps10023.1;Parent=Thaps10023;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 34420 35692 . + . ID=Thaps10024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ7];external_name=Thaps10024;logic_name=jgi_thaps3 chr15 ensembl transcript 34420 35692 . + . ID=Thaps10024;Parent=Thaps10024;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 34420 34923 . + 0 ID=Thaps10024;Parent=Thaps10024;rank=1 chr15 . exon 34420 34923 . + . ID=Thaps10024.1;Parent=Thaps10024;constitutive=1;rank=1 chr15 . CDS 34986 35642 . + 0 ID=Thaps10024;Parent=Thaps10024;rank=2 chr15 . exon 34986 35642 . + . ID=Thaps10024.2;Parent=Thaps10024;constitutive=1;rank=2 chr15 . CDS 35666 35692 . + 0 ID=Thaps10024;Parent=Thaps10024;rank=3 chr15 . exon 35666 35692 . + . ID=Thaps10024.3;Parent=Thaps10024;constitutive=1;rank=3 chr15 ensembl protein_coding_gene 30657 31835 . + . ID=Thaps24954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ5];external_name=Thaps24954;logic_name=jgi_thaps3 chr15 ensembl transcript 30657 31835 . + . ID=Thaps24954;Parent=Thaps24954;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 30657 31835 . + 0 ID=Thaps24954;Parent=Thaps24954;rank=1 chr15 . exon 30657 31835 . + . ID=Thaps24954.1;Parent=Thaps24954;constitutive=1;rank=1 chr15 . repeat_region 39847 39881 . ? . description=trf chr15 . repeat_region 39847 39882 . ? . description=trf chr15 . repeat_region 39847 39937 . ? . description=dust chr15 . repeat_region 41542 41550 . ? . description=dust chr15 . repeat_region 46079 46111 . ? . description=trf chr15 . repeat_region 46079 46115 . ? . description=dust chr15 ensembl protein_coding_gene 39976 41237 . + . ID=Thaps10025;biotype=protein_coding;description=Sec13-related protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ8];external_name=Thaps10025;logic_name=jgi_thaps3 chr15 ensembl transcript 39976 41237 . + . ID=Thaps10025;Parent=Thaps10025;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 39976 40033 . + 0 ID=Thaps10025;Parent=Thaps10025;rank=1 chr15 . exon 39976 40033 . + . ID=Thaps10025.1;Parent=Thaps10025;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 40381 41237 . + 0 ID=Thaps10025;Parent=Thaps10025;rank=2 chr15 . exon 40381 41237 . + . ID=Thaps10025.2;Parent=Thaps10025;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 45798 47042 . + . ID=Thaps10027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD00];external_name=Thaps10027;logic_name=jgi_thaps3 chr15 ensembl transcript 45798 47042 . + . ID=Thaps10027;Parent=Thaps10027;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 45798 47042 . + 0 ID=Thaps10027;Parent=Thaps10027;rank=1 chr15 . exon 45798 47042 . + . ID=Thaps10027.1;Parent=Thaps10027;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 41565 45251 . - . ID=Thaps24955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCZ9];external_name=Thaps24955;logic_name=jgi_thaps3 chr15 ensembl transcript 41565 45251 . - . ID=Thaps24955;Parent=Thaps24955;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 41565 45251 . - 0 ID=Thaps24955;Parent=Thaps24955;rank=1 chr15 . exon 41565 45251 . - . ID=Thaps24955.1;Parent=Thaps24955;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 48392 49691 . + . ID=Thaps24956;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD01];external_name=Thaps24956;logic_name=jgi_thaps3 chr15 ensembl transcript 48392 49691 . + . ID=Thaps24956;Parent=Thaps24956;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 48392 48563 . + 0 ID=Thaps24956;Parent=Thaps24956;rank=1 chr15 . exon 48392 48563 . + . ID=Thaps24956.1;Parent=Thaps24956;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 48616 49691 . + 0 ID=Thaps24956;Parent=Thaps24956;rank=2 chr15 . exon 48616 49691 . + . ID=Thaps24956.2;Parent=Thaps24956;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl rRNA_gene 55360 55473 . + . ID=EPrTPOG00000000001;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr15 ensembl rRNA 55360 55473 . + . ID=EPrTPOT00000000036;Parent=EPrTPOG00000000001;biotype=rRNA;logic_name=ncrna_eg chr15 . exon 55360 55473 . + . ID=EPrTPOE00000000001;Parent=EPrTPOT00000000036;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 52599 53449 . + . ID=Thaps37609;biotype=protein_coding;description=EPK 2%2C camp-dependent protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8CD02];external_name=Thaps37609;logic_name=jgi_thaps3 chr15 ensembl transcript 52599 53449 . + . ID=Thaps37609;Parent=Thaps37609;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 52599 53113 . + 0 ID=Thaps37609;Parent=Thaps37609;rank=1 chr15 . exon 52599 53113 . + . ID=Thaps37609.1;Parent=Thaps37609;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 53197 53449 . + 0 ID=Thaps37609;Parent=Thaps37609;rank=2 chr15 . exon 53197 53449 . + . ID=Thaps37609.2;Parent=Thaps37609;constitutive=1;ensembl_end_phase=1;rank=2 chr15 ensembl protein_coding_gene 55950 59894 . + . ID=Thaps37662;biotype=protein_coding;description=Cation transporting ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8CD04];external_name=Thaps37662;logic_name=jgi_thaps3 chr15 ensembl transcript 55950 59894 . + . ID=Thaps37662;Parent=Thaps37662;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 55950 56118 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=1 chr15 . exon 55950 56118 . + . ID=Thaps37662.1;Parent=Thaps37662;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 56245 56294 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=2 chr15 . exon 56245 56294 . + . ID=Thaps37662.2;Parent=Thaps37662;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 56373 57027 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=3 chr15 . exon 56373 57027 . + . ID=Thaps37662.3;Parent=Thaps37662;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 57110 57138 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=4 chr15 . exon 57110 57138 . + . ID=Thaps37662.4;Parent=Thaps37662;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 57219 58453 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=5 chr15 . exon 57219 58453 . + . ID=Thaps37662.5;Parent=Thaps37662;constitutive=1;ensembl_end_phase=2;rank=5 chr15 . CDS 58526 58638 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=6 chr15 . exon 58526 58638 . + . ID=Thaps37662.6;Parent=Thaps37662;constitutive=1;ensembl_end_phase=2;rank=6 chr15 . CDS 58727 58789 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=7 chr15 . exon 58727 58789 . + . ID=Thaps37662.7;Parent=Thaps37662;constitutive=1;rank=7 chr15 . CDS 58865 58900 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=8 chr15 . exon 58865 58900 . + . ID=Thaps37662.8;Parent=Thaps37662;constitutive=1;rank=8 chr15 . CDS 58993 59054 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=9 chr15 . exon 58993 59054 . + . ID=Thaps37662.9;Parent=Thaps37662;constitutive=1;ensembl_end_phase=2;rank=9 chr15 . CDS 59139 59172 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=10 chr15 . exon 59139 59172 . + . ID=Thaps37662.10;Parent=Thaps37662;constitutive=1;ensembl_end_phase=1;rank=10 chr15 . CDS 59259 59294 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=11 chr15 . exon 59259 59294 . + . ID=Thaps37662.11;Parent=Thaps37662;constitutive=1;rank=11 chr15 . CDS 59371 59894 . + 0 ID=Thaps37662;Parent=Thaps37662;rank=12 chr15 . exon 59371 59894 . + . ID=Thaps37662.12;Parent=Thaps37662;constitutive=1;ensembl_end_phase=2;rank=12 chr15 ensembl protein_coding_gene 53866 55089 . - . ID=Thaps37724;biotype=protein_coding;description=Adenosine deaminase [Source:UniProtKB/TrEMBL%3BAcc:B8CD03];external_name=Thaps37724;logic_name=jgi_thaps3 chr15 ensembl transcript 53866 55089 . - . ID=Thaps37724;Parent=Thaps37724;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 53866 55089 . - 0 ID=Thaps37724;Parent=Thaps37724;rank=1 chr15 . exon 53866 55089 . - . ID=Thaps37724.1;Parent=Thaps37724;constitutive=1;rank=1 chr15 . repeat_region 62390 62423 . ? . description=trf chr15 . repeat_region 62390 62437 . ? . description=dust chr15 . repeat_region 62392 62434 . ? . description=trf chr15 . repeat_region 63564 63571 . ? . description=dust chr15 . repeat_region 63635 66720 . ? . description=trf chr15 . repeat_region 67202 67684 . ? . description=trf chr15 ensembl protein_coding_gene 59974 62367 . - . ID=Thaps24958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD05];external_name=Thaps24958;logic_name=jgi_thaps3 chr15 ensembl transcript 59974 62367 . - . ID=Thaps24958;Parent=Thaps24958;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 59974 61275 . - 0 ID=Thaps24958;Parent=Thaps24958;rank=2 chr15 . exon 59974 61275 . - . ID=Thaps24958.2;Parent=Thaps24958;constitutive=1;rank=2 chr15 . CDS 61480 62367 . - 0 ID=Thaps24958;Parent=Thaps24958;rank=1 chr15 . exon 61480 62367 . - . ID=Thaps24958.1;Parent=Thaps24958;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 63370 70167 . - . ID=Thaps24959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD06];external_name=Thaps24959;logic_name=jgi_thaps3 chr15 ensembl transcript 63370 70167 . - . ID=Thaps24959;Parent=Thaps24959;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 63370 63647 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=26 chr15 . exon 63370 63647 . - . ID=Thaps24959.26;Parent=Thaps24959;constitutive=1;ensembl_end_phase=2;rank=26 chr15 . CDS 63742 63801 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=25 chr15 . exon 63742 63801 . - . ID=Thaps24959.25;Parent=Thaps24959;constitutive=1;rank=25 chr15 . CDS 63894 63944 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=24 chr15 . exon 63894 63944 . - . ID=Thaps24959.24;Parent=Thaps24959;constitutive=1;rank=24 chr15 . CDS 64039 64098 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=23 chr15 . exon 64039 64098 . - . ID=Thaps24959.23;Parent=Thaps24959;constitutive=1;rank=23 chr15 . CDS 64191 64241 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=22 chr15 . exon 64191 64241 . - . ID=Thaps24959.22;Parent=Thaps24959;constitutive=1;rank=22 chr15 . CDS 64336 64395 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=21 chr15 . exon 64336 64395 . - . ID=Thaps24959.21;Parent=Thaps24959;constitutive=1;rank=21 chr15 . CDS 64488 64538 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=20 chr15 . exon 64488 64538 . - . ID=Thaps24959.20;Parent=Thaps24959;constitutive=1;rank=20 chr15 . CDS 64633 64692 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=19 chr15 . exon 64633 64692 . - . ID=Thaps24959.19;Parent=Thaps24959;constitutive=1;rank=19 chr15 . CDS 64785 64835 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=18 chr15 . exon 64785 64835 . - . ID=Thaps24959.18;Parent=Thaps24959;constitutive=1;rank=18 chr15 . CDS 64930 64989 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=17 chr15 . exon 64930 64989 . - . ID=Thaps24959.17;Parent=Thaps24959;constitutive=1;rank=17 chr15 . CDS 65082 65132 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=16 chr15 . exon 65082 65132 . - . ID=Thaps24959.16;Parent=Thaps24959;constitutive=1;rank=16 chr15 . CDS 65227 65286 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=15 chr15 . exon 65227 65286 . - . ID=Thaps24959.15;Parent=Thaps24959;constitutive=1;rank=15 chr15 . CDS 65379 65429 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=14 chr15 . exon 65379 65429 . - . ID=Thaps24959.14;Parent=Thaps24959;constitutive=1;rank=14 chr15 . CDS 65524 65583 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=13 chr15 . exon 65524 65583 . - . ID=Thaps24959.13;Parent=Thaps24959;constitutive=1;rank=13 chr15 . CDS 65676 65726 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=12 chr15 . exon 65676 65726 . - . ID=Thaps24959.12;Parent=Thaps24959;constitutive=1;rank=12 chr15 . CDS 65821 65880 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=11 chr15 . exon 65821 65880 . - . ID=Thaps24959.11;Parent=Thaps24959;constitutive=1;rank=11 chr15 . CDS 65973 66023 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=10 chr15 . exon 65973 66023 . - . ID=Thaps24959.10;Parent=Thaps24959;constitutive=1;rank=10 chr15 . CDS 66118 66177 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=9 chr15 . exon 66118 66177 . - . ID=Thaps24959.9;Parent=Thaps24959;constitutive=1;rank=9 chr15 . CDS 66270 66320 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=8 chr15 . exon 66270 66320 . - . ID=Thaps24959.8;Parent=Thaps24959;constitutive=1;rank=8 chr15 . CDS 66415 66474 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=7 chr15 . exon 66415 66474 . - . ID=Thaps24959.7;Parent=Thaps24959;constitutive=1;rank=7 chr15 . CDS 66567 66617 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=6 chr15 . exon 66567 66617 . - . ID=Thaps24959.6;Parent=Thaps24959;constitutive=1;rank=6 chr15 . CDS 66712 66795 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=5 chr15 . exon 66712 66795 . - . ID=Thaps24959.5;Parent=Thaps24959;constitutive=1;rank=5 chr15 . CDS 66877 66948 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=4 chr15 . exon 66877 66948 . - . ID=Thaps24959.4;Parent=Thaps24959;constitutive=1;rank=4 chr15 . CDS 67011 67070 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=3 chr15 . exon 67011 67070 . - . ID=Thaps24959.3;Parent=Thaps24959;constitutive=1;rank=3 chr15 . CDS 67177 69250 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=2 chr15 . exon 67177 69250 . - . ID=Thaps24959.2;Parent=Thaps24959;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 69403 70167 . - 0 ID=Thaps24959;Parent=Thaps24959;rank=1 chr15 ensembl protein_coding_gene 70714 71277 . + . ID=Thaps10034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD07];external_name=Thaps10034;logic_name=jgi_thaps3 chr15 ensembl transcript 70714 71277 . + . ID=Thaps10034;Parent=Thaps10034;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 70714 71277 . + 0 ID=Thaps10034;Parent=Thaps10034;rank=1 chr15 . exon 70714 71277 . + . ID=Thaps10034.1;Parent=Thaps10034;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 72758 73891 . + . ID=Thaps10035;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD08];external_name=Thaps10035;logic_name=jgi_thaps3 chr15 ensembl transcript 72758 73891 . + . ID=Thaps10035;Parent=Thaps10035;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 72758 73043 . + 0 ID=Thaps10035;Parent=Thaps10035;rank=1 chr15 . exon 72758 73043 . + . ID=Thaps10035.1;Parent=Thaps10035;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 73166 73220 . + 0 ID=Thaps10035;Parent=Thaps10035;rank=2 chr15 . exon 73166 73220 . + . ID=Thaps10035.2;Parent=Thaps10035;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 73312 73891 . + 0 ID=Thaps10035;Parent=Thaps10035;rank=3 chr15 . exon 73312 73891 . + . ID=Thaps10035.3;Parent=Thaps10035;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . exon 69403 70167 . - . ID=Thaps24959.1;Parent=Thaps24959;constitutive=1;rank=1 chr15 . repeat_region 82210 82219 . ? . description=dust chr15 . repeat_region 84665 84701 . ? . description=trf chr15 ensembl protein_coding_gene 80346 81647 . - . ID=Thaps10037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD09];external_name=Thaps10037;logic_name=jgi_thaps3 chr15 ensembl transcript 80346 81647 . - . ID=Thaps10037;Parent=Thaps10037;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 80346 81647 . - 0 ID=Thaps10037;Parent=Thaps10037;rank=1 chr15 . exon 80346 81647 . - . ID=Thaps10037.1;Parent=Thaps10037;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 84961 85366 . + . ID=Thaps18795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD10];external_name=Thaps18795;logic_name=jgi_thaps3 chr15 ensembl transcript 84961 85366 . + . ID=Thaps18795;Parent=Thaps18795;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 84961 85057 . + 0 ID=Thaps18795;Parent=Thaps18795;rank=1 chr15 . exon 84961 85057 . + . ID=Thaps18795.1;Parent=Thaps18795;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 85149 85366 . + 0 ID=Thaps18795;Parent=Thaps18795;rank=2 chr15 . exon 85149 85366 . + . ID=Thaps18795.2;Parent=Thaps18795;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 89322 90444 . - . ID=Thaps10039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD11];external_name=Thaps10039;logic_name=jgi_thaps3 chr15 ensembl transcript 89322 90444 . - . ID=Thaps10039;Parent=Thaps10039;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 89322 89501 . - 0 ID=Thaps10039;Parent=Thaps10039;rank=5 chr15 . exon 89322 89501 . - . ID=Thaps10039.5;Parent=Thaps10039;constitutive=1;rank=5 chr15 . CDS 89638 89709 . - 0 ID=Thaps10039;Parent=Thaps10039;rank=4 chr15 . exon 89638 89709 . - . ID=Thaps10039.4;Parent=Thaps10039;constitutive=1;rank=4 chr15 . CDS 89832 89897 . - 0 ID=Thaps10039;Parent=Thaps10039;rank=3 chr15 . exon 89832 89897 . - . ID=Thaps10039.3;Parent=Thaps10039;constitutive=1;rank=3 chr15 . CDS 89934 90154 . - 0 ID=Thaps10039;Parent=Thaps10039;rank=2 chr15 . exon 89934 90154 . - . ID=Thaps10039.2;Parent=Thaps10039;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 90207 90444 . - 0 ID=Thaps10039;Parent=Thaps10039;rank=1 chr15 . exon 90207 90444 . - . ID=Thaps10039.1;Parent=Thaps10039;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 93389 94117 . + . ID=Thaps10041;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD13];external_name=Thaps10041;logic_name=jgi_thaps3 chr15 ensembl transcript 93389 94117 . + . ID=Thaps10041;Parent=Thaps10041;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 93389 94117 . + 0 ID=Thaps10041;Parent=Thaps10041;rank=1 chr15 . exon 93389 94117 . + . ID=Thaps10041.1;Parent=Thaps10041;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 94650 95938 . - . ID=Thaps10042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD14];external_name=Thaps10042;logic_name=jgi_thaps3 chr15 ensembl transcript 94650 95938 . - . ID=Thaps10042;Parent=Thaps10042;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 94650 95756 . - 0 ID=Thaps10042;Parent=Thaps10042;rank=2 chr15 . exon 94650 95756 . - . ID=Thaps10042.2;Parent=Thaps10042;constitutive=1;rank=2 chr15 . CDS 95897 95938 . - 0 ID=Thaps10042;Parent=Thaps10042;rank=1 chr15 . exon 95897 95938 . - . ID=Thaps10042.1;Parent=Thaps10042;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 90946 93085 . + . ID=Thaps24961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD12];external_name=Thaps24961;logic_name=jgi_thaps3 chr15 ensembl transcript 90946 93085 . + . ID=Thaps24961;Parent=Thaps24961;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 90946 92082 . + 0 ID=Thaps24961;Parent=Thaps24961;rank=1 chr15 . exon 90946 92082 . + . ID=Thaps24961.1;Parent=Thaps24961;constitutive=1;rank=1 chr15 . CDS 92201 93085 . + 0 ID=Thaps24961;Parent=Thaps24961;rank=2 chr15 . exon 92201 93085 . + . ID=Thaps24961.2;Parent=Thaps24961;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 96170 97072 . + . ID=Thaps24962;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD15];external_name=Thaps24962;logic_name=jgi_thaps3 chr15 ensembl transcript 96170 97072 . + . ID=Thaps24962;Parent=Thaps24962;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 96170 97072 . + 0 ID=Thaps24962;Parent=Thaps24962;rank=1 chr15 . exon 96170 97072 . + . ID=Thaps24962.1;Parent=Thaps24962;constitutive=1;rank=1 chr15 . repeat_region 99343 99390 . ? . description=dust chr15 . repeat_region 101544 101624 . ? . description=dust chr15 . repeat_region 101559 101628 . ? . description=trf chr15 . repeat_region 103794 103801 . ? . description=dust chr15 . repeat_region 104370 105163 . ? . description=trf chr15 . repeat_region 106718 106734 . ? . description=dust chr15 ensembl miRNA_gene 101558 101640 . + . ID=EPrTPOG00000000029;biotype=miRNA;description=microRNA mir-653 [Source:RFAM%3BAcc:RF00937];external_name=mir-653;logic_name=ncrna_eg chr15 ensembl miRNA 101558 101640 . + . ID=EPrTPOT00000000033;Parent=EPrTPOG00000000029;biotype=miRNA;logic_name=ncrna_eg chr15 . exon 101558 101640 . + . ID=EPrTPOE00000000029;Parent=EPrTPOT00000000033;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 100164 100852 . + . ID=Thaps10045;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD17];external_name=Thaps10045;logic_name=jgi_thaps3 chr15 ensembl transcript 100164 100852 . + . ID=Thaps10045;Parent=Thaps10045;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 100164 100524 . + 0 ID=Thaps10045;Parent=Thaps10045;rank=1 chr15 . exon 100164 100524 . + . ID=Thaps10045.1;Parent=Thaps10045;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 100575 100852 . + 0 ID=Thaps10045;Parent=Thaps10045;rank=2 chr15 . exon 100575 100852 . + . ID=Thaps10045.2;Parent=Thaps10045;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 103813 106236 . - . ID=Thaps10046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD18];external_name=Thaps10046;logic_name=jgi_thaps3 chr15 ensembl transcript 103813 106236 . - . ID=Thaps10046;Parent=Thaps10046;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 103813 106236 . - 0 ID=Thaps10046;Parent=Thaps10046;rank=1 chr15 . exon 103813 106236 . - . ID=Thaps10046.1;Parent=Thaps10046;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 107900 109168 . - . ID=Thaps10047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD19];external_name=Thaps10047;logic_name=jgi_thaps3 chr15 ensembl transcript 107900 109168 . - . ID=Thaps10047;Parent=Thaps10047;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 107900 109168 . - 0 ID=Thaps10047;Parent=Thaps10047;rank=1 chr15 . exon 107900 109168 . - . ID=Thaps10047.1;Parent=Thaps10047;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 99117 99927 . - . ID=Thaps24963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD16];external_name=Thaps24963;logic_name=jgi_thaps3 chr15 ensembl transcript 99117 99927 . - . ID=Thaps24963;Parent=Thaps24963;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 99117 99246 . - 0 ID=Thaps24963;Parent=Thaps24963;rank=3 chr15 . exon 99117 99246 . - . ID=Thaps24963.3;Parent=Thaps24963;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 99400 99710 . - 0 ID=Thaps24963;Parent=Thaps24963;rank=2 chr15 . exon 99400 99710 . - . ID=Thaps24963.2;Parent=Thaps24963;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 99853 99927 . - 0 ID=Thaps24963;Parent=Thaps24963;rank=1 chr15 . exon 99853 99927 . - . ID=Thaps24963.1;Parent=Thaps24963;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 109998 110714 . - . ID=Thaps10048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD20];external_name=Thaps10048;logic_name=jgi_thaps3 chr15 ensembl transcript 109998 110714 . - . ID=Thaps10048;Parent=Thaps10048;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 109998 110714 . - 0 ID=Thaps10048;Parent=Thaps10048;rank=1 chr15 . exon 109998 110714 . - . ID=Thaps10048.1;Parent=Thaps10048;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 112639 114357 . - . ID=Thaps10050;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD22];external_name=Thaps10050;logic_name=jgi_thaps3 chr15 ensembl transcript 112639 114357 . - . ID=Thaps10050;Parent=Thaps10050;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 112639 114357 . - 0 ID=Thaps10050;Parent=Thaps10050;rank=1 chr15 . exon 112639 114357 . - . ID=Thaps10050.1;Parent=Thaps10050;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 116078 118183 . - . ID=Thaps10052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD24];external_name=Thaps10052;logic_name=jgi_thaps3 chr15 ensembl transcript 116078 118183 . - . ID=Thaps10052;Parent=Thaps10052;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 116078 116305 . - 0 ID=Thaps10052;Parent=Thaps10052;rank=2 chr15 . exon 116078 116305 . - . ID=Thaps10052.2;Parent=Thaps10052;constitutive=1;rank=2 chr15 . CDS 116423 118183 . - 0 ID=Thaps10052;Parent=Thaps10052;rank=1 chr15 . exon 116423 118183 . - . ID=Thaps10052.1;Parent=Thaps10052;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 118504 122706 . + . ID=Thaps10053;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD25];external_name=Thaps10053;logic_name=jgi_thaps3 chr15 ensembl transcript 118504 122706 . + . ID=Thaps10053;Parent=Thaps10053;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 118504 120298 . + 0 ID=Thaps10053;Parent=Thaps10053;rank=1 chr15 . exon 118504 120298 . + . ID=Thaps10053.1;Parent=Thaps10053;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 120380 122706 . + 0 ID=Thaps10053;Parent=Thaps10053;rank=2 chr15 ensembl protein_coding_gene 114907 115796 . + . ID=Thaps264268;biotype=protein_coding;description=Response regulator [Source:UniProtKB/TrEMBL%3BAcc:B8CD23];external_name=Thaps264268;logic_name=jgi_thaps3 chr15 ensembl transcript 114907 115796 . + . ID=Thaps264268;Parent=Thaps264268;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 114907 115028 . + 0 ID=Thaps264268;Parent=Thaps264268;rank=1 chr15 . exon 114907 115028 . + . ID=Thaps264268.1;Parent=Thaps264268;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 115149 115226 . + 0 ID=Thaps264268;Parent=Thaps264268;rank=2 chr15 . exon 115149 115226 . + . ID=Thaps264268.2;Parent=Thaps264268;constitutive=1;rank=2 chr15 . CDS 115320 115360 . + 0 ID=Thaps264268;Parent=Thaps264268;rank=3 chr15 . exon 115320 115360 . + . ID=Thaps264268.3;Parent=Thaps264268;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 115526 115796 . + 0 ID=Thaps264268;Parent=Thaps264268;rank=4 chr15 . exon 115526 115796 . + . ID=Thaps264268.4;Parent=Thaps264268;constitutive=1;ensembl_end_phase=1;rank=4 chr15 ensembl protein_coding_gene 111797 112420 . + . ID=Thaps37599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD21];external_name=Thaps37599;logic_name=jgi_thaps3 chr15 ensembl transcript 111797 112420 . + . ID=Thaps37599;Parent=Thaps37599;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 111797 112420 . + 0 ID=Thaps37599;Parent=Thaps37599;rank=1 chr15 . exon 111797 112420 . + . ID=Thaps37599.1;Parent=Thaps37599;constitutive=1;rank=1 chr15 . repeat_region 126839 126882 . ? . description=trf chr15 . exon 120380 122706 . + . ID=Thaps10053.2;Parent=Thaps10053;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 122797 125912 . - . ID=Thaps264269;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD26];external_name=Thaps264269;logic_name=jgi_thaps3 chr15 ensembl transcript 122797 125912 . - . ID=Thaps264269;Parent=Thaps264269;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 122797 124471 . - 0 ID=Thaps264269;Parent=Thaps264269;rank=2 chr15 . exon 122797 124471 . - . ID=Thaps264269.2;Parent=Thaps264269;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 124550 125912 . - 0 ID=Thaps264269;Parent=Thaps264269;rank=1 chr15 . exon 124550 125912 . - . ID=Thaps264269.1;Parent=Thaps264269;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . repeat_region 128805 128815 . ? . description=dust chr15 . repeat_region 137404 137411 . ? . description=dust chr15 ensembl protein_coding_gene 128974 130344 . - . ID=Thaps10055;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD27];external_name=Thaps10055;logic_name=jgi_thaps3 chr15 ensembl transcript 128974 130344 . - . ID=Thaps10055;Parent=Thaps10055;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 128974 130007 . - 0 ID=Thaps10055;Parent=Thaps10055;rank=2 chr15 . exon 128974 130007 . - . ID=Thaps10055.2;Parent=Thaps10055;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 130119 130344 . - 0 ID=Thaps10055;Parent=Thaps10055;rank=1 chr15 . exon 130119 130344 . - . ID=Thaps10055.1;Parent=Thaps10055;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 133336 138078 . + . ID=Thaps10057;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD29];external_name=Thaps10057;logic_name=jgi_thaps3 chr15 ensembl transcript 133336 138078 . + . ID=Thaps10057;Parent=Thaps10057;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 133336 138078 . + 0 ID=Thaps10057;Parent=Thaps10057;rank=1 chr15 . exon 133336 138078 . + . ID=Thaps10057.1;Parent=Thaps10057;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 138289 139705 . - . ID=Thaps10058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD30];external_name=Thaps10058;logic_name=jgi_thaps3 chr15 ensembl transcript 138289 139705 . - . ID=Thaps10058;Parent=Thaps10058;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 138289 138354 . - 0 ID=Thaps10058;Parent=Thaps10058;rank=2 chr15 . exon 138289 138354 . - . ID=Thaps10058.2;Parent=Thaps10058;constitutive=1;rank=2 chr15 . CDS 138395 139705 . - 0 ID=Thaps10058;Parent=Thaps10058;rank=1 chr15 . exon 138395 139705 . - . ID=Thaps10058.1;Parent=Thaps10058;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 130801 132014 . + . ID=Thaps37607;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD28];external_name=Thaps37607;logic_name=jgi_thaps3 chr15 ensembl transcript 130801 132014 . + . ID=Thaps37607;Parent=Thaps37607;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 130801 131015 . + 0 ID=Thaps37607;Parent=Thaps37607;rank=1 chr15 . exon 130801 131015 . + . ID=Thaps37607.1;Parent=Thaps37607;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 131141 132014 . + 0 ID=Thaps37607;Parent=Thaps37607;rank=2 chr15 . exon 131141 132014 . + . ID=Thaps37607.2;Parent=Thaps37607;constitutive=1;ensembl_end_phase=1;rank=2 chr15 ensembl protein_coding_gene 140076 141140 . + . ID=Thaps10059;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD31];external_name=Thaps10059;logic_name=jgi_thaps3 chr15 ensembl transcript 140076 141140 . + . ID=Thaps10059;Parent=Thaps10059;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 140076 141140 . + 0 ID=Thaps10059;Parent=Thaps10059;rank=1 chr15 . exon 140076 141140 . + . ID=Thaps10059.1;Parent=Thaps10059;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 142091 142771 . - . ID=Thaps24965;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD32];external_name=Thaps24965;logic_name=jgi_thaps3 chr15 ensembl transcript 142091 142771 . - . ID=Thaps24965;Parent=Thaps24965;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 142091 142251 . - 0 ID=Thaps24965;Parent=Thaps24965;rank=2 chr15 . exon 142091 142251 . - . ID=Thaps24965.2;Parent=Thaps24965;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 142351 142771 . - 0 ID=Thaps24965;Parent=Thaps24965;rank=1 chr15 . exon 142351 142771 . - . ID=Thaps24965.1;Parent=Thaps24965;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl gene 147383 148011 . + . ID=Thaps264271;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr15 ensembl transcript 147383 148011 . + . ID=Thaps264271;Parent=Thaps264271;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr15 . exon 147383 147417 . + . ID=Thaps264271.1;Parent=Thaps264271;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . exon 147437 147542 . + . ID=Thaps264271.2;Parent=Thaps264271;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . exon 147638 148011 . + . ID=Thaps264271.3;Parent=Thaps264271;constitutive=1;ensembl_end_phase=2;rank=3 chr15 ensembl protein_coding_gene 149226 149912 . - . ID=Thaps10062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD33];external_name=Thaps10062;logic_name=jgi_thaps3 chr15 ensembl transcript 149226 149912 . - . ID=Thaps10062;Parent=Thaps10062;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 149226 149477 . - 0 ID=Thaps10062;Parent=Thaps10062;rank=2 chr15 . exon 149226 149477 . - . ID=Thaps10062.2;Parent=Thaps10062;constitutive=1;rank=2 chr15 . CDS 149589 149912 . - 0 ID=Thaps10062;Parent=Thaps10062;rank=1 chr15 . exon 149589 149912 . - . ID=Thaps10062.1;Parent=Thaps10062;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 150880 152529 . + . ID=Thaps10063;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD34];external_name=Thaps10063;logic_name=jgi_thaps3 chr15 ensembl transcript 150880 152529 . + . ID=Thaps10063;Parent=Thaps10063;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 150880 152529 . + 0 ID=Thaps10063;Parent=Thaps10063;rank=1 chr15 . exon 150880 152529 . + . ID=Thaps10063.1;Parent=Thaps10063;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 153642 155357 . - . ID=Thaps10064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD35];external_name=Thaps10064;logic_name=jgi_thaps3 chr15 ensembl transcript 153642 155357 . - . ID=Thaps10064;Parent=Thaps10064;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 153642 155020 . - 0 ID=Thaps10064;Parent=Thaps10064;rank=3 chr15 . exon 153642 155020 . - . ID=Thaps10064.3;Parent=Thaps10064;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 155079 155102 . - 0 ID=Thaps10064;Parent=Thaps10064;rank=2 chr15 . exon 155079 155102 . - . ID=Thaps10064.2;Parent=Thaps10064;constitutive=1;rank=2 chr15 . CDS 155171 155357 . - 0 ID=Thaps10064;Parent=Thaps10064;rank=1 chr15 . exon 155171 155357 . - . ID=Thaps10064.1;Parent=Thaps10064;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 157885 159177 . + . ID=Thaps24969;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD38];external_name=Thaps24969;logic_name=jgi_thaps3 chr15 ensembl transcript 157885 159177 . + . ID=Thaps24969;Parent=Thaps24969;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 157885 159177 . + 0 ID=Thaps24969;Parent=Thaps24969;rank=1 chr15 . exon 157885 159177 . + . ID=Thaps24969.1;Parent=Thaps24969;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 155525 156607 . + . ID=Thaps30105;biotype=protein_coding;description=Probable farnesyl pyrophosphate synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CD36];external_name=FPS1;logic_name=jgi_thaps3 chr15 ensembl transcript 155525 156607 . + . ID=Thaps30105;Parent=Thaps30105;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 155525 156607 . + 0 ID=Thaps30105;Parent=Thaps30105;rank=1 chr15 . exon 155525 156607 . + . ID=Thaps30105.1;Parent=Thaps30105;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 156869 157657 . - . ID=Thaps37739;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD37];external_name=Thaps37739;logic_name=jgi_thaps3 chr15 ensembl transcript 156869 157657 . - . ID=Thaps37739;Parent=Thaps37739;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 156869 157657 . - 0 ID=Thaps37739;Parent=Thaps37739;rank=1 chr15 . exon 156869 157657 . - . ID=Thaps37739.1;Parent=Thaps37739;constitutive=1;rank=1 chr15 . repeat_region 165909 165933 . ? . description=trf chr15 . repeat_region 167409 167440 . ? . description=trf chr15 . repeat_region 167603 167643 . ? . description=dust chr15 ensembl protein_coding_gene 159370 160173 . - . ID=Thaps10068;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD39];external_name=Thaps10068;logic_name=jgi_thaps3 chr15 ensembl transcript 159370 160173 . - . ID=Thaps10068;Parent=Thaps10068;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 159370 160173 . - 0 ID=Thaps10068;Parent=Thaps10068;rank=1 chr15 . exon 159370 160173 . - . ID=Thaps10068.1;Parent=Thaps10068;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 166794 169193 . + . ID=Thaps10071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD42];external_name=Thaps10071;logic_name=jgi_thaps3 chr15 ensembl transcript 166794 169193 . + . ID=Thaps10071;Parent=Thaps10071;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 166794 166847 . + 0 ID=Thaps10071;Parent=Thaps10071;rank=1 chr15 . exon 166794 166847 . + . ID=Thaps10071.1;Parent=Thaps10071;constitutive=1;rank=1 chr15 . CDS 167443 167595 . + 0 ID=Thaps10071;Parent=Thaps10071;rank=2 chr15 . exon 167443 167595 . + . ID=Thaps10071.2;Parent=Thaps10071;constitutive=1;rank=2 chr15 . CDS 167779 167907 . + 0 ID=Thaps10071;Parent=Thaps10071;rank=3 chr15 . exon 167779 167907 . + . ID=Thaps10071.3;Parent=Thaps10071;constitutive=1;rank=3 chr15 . CDS 168010 168095 . + 0 ID=Thaps10071;Parent=Thaps10071;rank=4 chr15 . exon 168010 168095 . + . ID=Thaps10071.4;Parent=Thaps10071;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 168411 168600 . + 0 ID=Thaps10071;Parent=Thaps10071;rank=5 chr15 . exon 168411 168600 . + . ID=Thaps10071.5;Parent=Thaps10071;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 168690 168988 . + 0 ID=Thaps10071;Parent=Thaps10071;rank=6 chr15 . CDS 169067 169193 . + 0 ID=Thaps10071;Parent=Thaps10071;rank=7 chr15 ensembl protein_coding_gene 164442 166028 . - . ID=Thaps24970;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD41];external_name=Thaps24970;logic_name=jgi_thaps3 chr15 ensembl transcript 164442 166028 . - . ID=Thaps24970;Parent=Thaps24970;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 164442 166028 . - 0 ID=Thaps24970;Parent=Thaps24970;rank=1 chr15 . exon 164442 166028 . - . ID=Thaps24970.1;Parent=Thaps24970;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 160513 161377 . + . ID=Thaps264274;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD40];external_name=Thaps264274;logic_name=jgi_thaps3 chr15 ensembl transcript 160513 161377 . + . ID=Thaps264274;Parent=Thaps264274;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 160513 160996 . + 0 ID=Thaps264274;Parent=Thaps264274;rank=1 chr15 . exon 160513 160996 . + . ID=Thaps264274.1;Parent=Thaps264274;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 161030 161377 . + 0 ID=Thaps264274;Parent=Thaps264274;rank=2 chr15 . exon 161030 161377 . + . ID=Thaps264274.2;Parent=Thaps264274;constitutive=1;rank=2 chr15 ensembl gene 164047 164332 . + . ID=Thaps264275;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr15 ensembl transcript 164047 164332 . + . ID=Thaps264275;Parent=Thaps264275;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr15 . exon 164047 164332 . + . ID=Thaps264275.1;Parent=Thaps264275;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . exon 168690 168988 . + . ID=Thaps10071.6;Parent=Thaps10071;constitutive=1;ensembl_end_phase=2;rank=6 chr15 . exon 169067 169193 . + . ID=Thaps10071.7;Parent=Thaps10071;constitutive=1;ensembl_end_phase=1;rank=7 chr15 ensembl protein_coding_gene 173934 174596 . - . ID=Thaps10073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD44];external_name=Thaps10073;logic_name=jgi_thaps3 chr15 ensembl transcript 173934 174596 . - . ID=Thaps10073;Parent=Thaps10073;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 173934 174596 . - 0 ID=Thaps10073;Parent=Thaps10073;rank=1 chr15 . exon 173934 174596 . - . ID=Thaps10073.1;Parent=Thaps10073;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 169393 173316 . - . ID=Thaps24971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD43];external_name=Thaps24971;logic_name=jgi_thaps3 chr15 ensembl transcript 169393 173316 . - . ID=Thaps24971;Parent=Thaps24971;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 169393 173316 . - 0 ID=Thaps24971;Parent=Thaps24971;rank=1 chr15 . exon 169393 173316 . - . ID=Thaps24971.1;Parent=Thaps24971;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 175435 176533 . - . ID=Thaps24972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD45];external_name=Thaps24972;logic_name=jgi_thaps3 chr15 ensembl transcript 175435 176533 . - . ID=Thaps24972;Parent=Thaps24972;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 175435 176363 . - 0 ID=Thaps24972;Parent=Thaps24972;rank=2 chr15 . exon 175435 176363 . - . ID=Thaps24972.2;Parent=Thaps24972;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 176383 176533 . - 0 ID=Thaps24972;Parent=Thaps24972;rank=1 chr15 . exon 176383 176533 . - . ID=Thaps24972.1;Parent=Thaps24972;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 177847 178932 . + . ID=Thaps37615;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD46];external_name=Thaps37615;logic_name=jgi_thaps3 chr15 ensembl transcript 177847 178932 . + . ID=Thaps37615;Parent=Thaps37615;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 177847 178032 . + 0 ID=Thaps37615;Parent=Thaps37615;rank=1 chr15 . exon 177847 178032 . + . ID=Thaps37615.1;Parent=Thaps37615;constitutive=1;rank=1 chr15 . CDS 178081 178566 . + 0 ID=Thaps37615;Parent=Thaps37615;rank=2 chr15 . exon 178081 178566 . + . ID=Thaps37615.2;Parent=Thaps37615;constitutive=1;rank=2 chr15 . CDS 178663 178932 . + 0 ID=Thaps37615;Parent=Thaps37615;rank=3 chr15 . repeat_region 185953 185978 . ? . description=trf chr15 . repeat_region 185953 185978 . ? . description=dust chr15 . repeat_region 187604 187643 . ? . description=trf chr15 . repeat_region 187604 187643 . ? . description=dust chr15 . repeat_region 187613 187649 . ? . description=trf chr15 . repeat_region 187614 187643 . ? . description=trf chr15 . repeat_region 188144 188180 . ? . description=trf chr15 . repeat_region 188144 188180 . ? . description=dust chr15 ensembl protein_coding_gene 186718 187809 . + . ID=Thaps10077;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD48];external_name=Thaps10077;logic_name=jgi_thaps3 chr15 ensembl transcript 186718 187809 . + . ID=Thaps10077;Parent=Thaps10077;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 186718 186753 . + 0 ID=Thaps10077;Parent=Thaps10077;rank=1 chr15 . exon 186718 186753 . + . ID=Thaps10077.1;Parent=Thaps10077;constitutive=1;rank=1 chr15 . CDS 187002 187197 . + 0 ID=Thaps10077;Parent=Thaps10077;rank=2 chr15 . exon 187002 187197 . + . ID=Thaps10077.2;Parent=Thaps10077;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 187339 187517 . + 0 ID=Thaps10077;Parent=Thaps10077;rank=3 chr15 . exon 187339 187517 . + . ID=Thaps10077.3;Parent=Thaps10077;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 187690 187809 . + 0 ID=Thaps10077;Parent=Thaps10077;rank=4 chr15 . exon 187690 187809 . + . ID=Thaps10077.4;Parent=Thaps10077;constitutive=1;rank=4 chr15 ensembl protein_coding_gene 188216 190447 . - . ID=Thaps10078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD49];external_name=Thaps10078;logic_name=jgi_thaps3 chr15 ensembl transcript 188216 190447 . - . ID=Thaps10078;Parent=Thaps10078;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 188216 190447 . - 0 ID=Thaps10078;Parent=Thaps10078;rank=1 chr15 . exon 188216 190447 . - . ID=Thaps10078.1;Parent=Thaps10078;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 180190 182803 . - . ID=Thaps264276;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD47];external_name=Thaps264276;logic_name=jgi_thaps3 chr15 ensembl transcript 180190 182803 . - . ID=Thaps264276;Parent=Thaps264276;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 180190 180658 . - 0 ID=Thaps264276;Parent=Thaps264276;rank=5 chr15 . exon 180190 180658 . - . ID=Thaps264276.5;Parent=Thaps264276;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 180740 181358 . - 0 ID=Thaps264276;Parent=Thaps264276;rank=4 chr15 . exon 180740 181358 . - . ID=Thaps264276.4;Parent=Thaps264276;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 181404 181523 . - 0 ID=Thaps264276;Parent=Thaps264276;rank=3 chr15 . exon 181404 181523 . - . ID=Thaps264276.3;Parent=Thaps264276;constitutive=1;rank=3 chr15 . CDS 181656 182154 . - 0 ID=Thaps264276;Parent=Thaps264276;rank=2 chr15 . exon 181656 182154 . - . ID=Thaps264276.2;Parent=Thaps264276;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 182253 182803 . - 0 ID=Thaps264276;Parent=Thaps264276;rank=1 chr15 . exon 182253 182803 . - . ID=Thaps264276.1;Parent=Thaps264276;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . exon 178663 178932 . + . ID=Thaps37615.3;Parent=Thaps37615;constitutive=1;rank=3 chr15 ensembl protein_coding_gene 190781 191952 . + . ID=Thaps10079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD50];external_name=Thaps10079;logic_name=jgi_thaps3 chr15 ensembl transcript 190781 191952 . + . ID=Thaps10079;Parent=Thaps10079;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 190781 191851 . + 0 ID=Thaps10079;Parent=Thaps10079;rank=1 chr15 . exon 190781 191851 . + . ID=Thaps10079.1;Parent=Thaps10079;constitutive=1;rank=1 chr15 . CDS 191935 191952 . + 0 ID=Thaps10079;Parent=Thaps10079;rank=2 chr15 . exon 191935 191952 . + . ID=Thaps10079.2;Parent=Thaps10079;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 192139 193414 . - . ID=Thaps10080;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD51];external_name=Thaps10080;logic_name=jgi_thaps3 chr15 ensembl transcript 192139 193414 . - . ID=Thaps10080;Parent=Thaps10080;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 192139 192703 . - 0 ID=Thaps10080;Parent=Thaps10080;rank=2 chr15 . exon 192139 192703 . - . ID=Thaps10080.2;Parent=Thaps10080;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 192879 193414 . - 0 ID=Thaps10080;Parent=Thaps10080;rank=1 chr15 . exon 192879 193414 . - . ID=Thaps10080.1;Parent=Thaps10080;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 194572 195399 . + . ID=Thaps10081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD52];external_name=Thaps10081;logic_name=jgi_thaps3 chr15 ensembl transcript 194572 195399 . + . ID=Thaps10081;Parent=Thaps10081;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 194572 195399 . + 0 ID=Thaps10081;Parent=Thaps10081;rank=1 chr15 . exon 194572 195399 . + . ID=Thaps10081.1;Parent=Thaps10081;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 195828 198041 . + . ID=Thaps10082;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD53];external_name=Thaps10082;logic_name=jgi_thaps3 chr15 ensembl transcript 195828 198041 . + . ID=Thaps10082;Parent=Thaps10082;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 195828 198041 . + 0 ID=Thaps10082;Parent=Thaps10082;rank=1 chr15 . exon 195828 198041 . + . ID=Thaps10082.1;Parent=Thaps10082;constitutive=1;rank=1 chr15 . repeat_region 198159 198196 . ? . description=dust chr15 . repeat_region 200158 200191 . ? . description=trf chr15 . repeat_region 200158 200191 . ? . description=dust chr15 ensembl protein_coding_gene 198519 200625 . - . ID=Thaps10083;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD54];external_name=Thaps10083;logic_name=jgi_thaps3 chr15 ensembl transcript 198519 200625 . - . ID=Thaps10083;Parent=Thaps10083;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 198519 198534 . - 0 ID=Thaps10083;Parent=Thaps10083;rank=3 chr15 . exon 198519 198534 . - . ID=Thaps10083.3;Parent=Thaps10083;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 198741 199573 . - 0 ID=Thaps10083;Parent=Thaps10083;rank=2 chr15 . exon 198741 199573 . - . ID=Thaps10083.2;Parent=Thaps10083;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 199675 200625 . - 0 ID=Thaps10083;Parent=Thaps10083;rank=1 chr15 . exon 199675 200625 . - . ID=Thaps10083.1;Parent=Thaps10083;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 202487 210793 . - . ID=Thaps24974;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD55];external_name=Thaps24974;logic_name=jgi_thaps3 chr15 ensembl transcript 202487 210793 . - . ID=Thaps24974;Parent=Thaps24974;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 202487 202741 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=10 chr15 . exon 202487 202741 . - . ID=Thaps24974.10;Parent=Thaps24974;constitutive=1;rank=10 chr15 . CDS 202830 202978 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=9 chr15 . exon 202830 202978 . - . ID=Thaps24974.9;Parent=Thaps24974;constitutive=1;ensembl_end_phase=2;rank=9 chr15 . CDS 203044 203121 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=8 chr15 . exon 203044 203121 . - . ID=Thaps24974.8;Parent=Thaps24974;constitutive=1;rank=8 chr15 . CDS 203150 203462 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=7 chr15 . exon 203150 203462 . - . ID=Thaps24974.7;Parent=Thaps24974;constitutive=1;ensembl_end_phase=1;rank=7 chr15 . CDS 203734 203812 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=6 chr15 . exon 203734 203812 . - . ID=Thaps24974.6;Parent=Thaps24974;constitutive=1;ensembl_end_phase=1;rank=6 chr15 . CDS 204073 205103 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=5 chr15 . exon 204073 205103 . - . ID=Thaps24974.5;Parent=Thaps24974;constitutive=1;ensembl_end_phase=2;rank=5 chr15 . CDS 205167 207686 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=4 chr15 . exon 205167 207686 . - . ID=Thaps24974.4;Parent=Thaps24974;constitutive=1;rank=4 chr15 . CDS 207747 207779 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=3 chr15 . exon 207747 207779 . - . ID=Thaps24974.3;Parent=Thaps24974;constitutive=1;rank=3 chr15 . CDS 208256 209500 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=2 chr15 . CDS 209609 210793 . - 0 ID=Thaps24974;Parent=Thaps24974;rank=1 chr15 . repeat_region 210794 210847 . - . description=Copia9LTR_TP chr15 ensembl protein_coding_gene 211356 218415 . + . ID=Thaps10085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD56];external_name=Thaps10085;logic_name=jgi_thaps3 chr15 ensembl transcript 211356 218415 . + . ID=Thaps10085;Parent=Thaps10085;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 211356 214695 . + 0 ID=Thaps10085;Parent=Thaps10085;rank=1 chr15 . exon 211356 214695 . + . ID=Thaps10085.1;Parent=Thaps10085;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 215067 215133 . + 0 ID=Thaps10085;Parent=Thaps10085;rank=2 chr15 . exon 215067 215133 . + . ID=Thaps10085.2;Parent=Thaps10085;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 215179 218358 . + 0 ID=Thaps10085;Parent=Thaps10085;rank=3 chr15 . exon 215179 218358 . + . ID=Thaps10085.3;Parent=Thaps10085;constitutive=1;rank=3 chr15 . CDS 218397 218415 . + 0 ID=Thaps10085;Parent=Thaps10085;rank=4 chr15 . exon 208256 209500 . - . ID=Thaps24974.2;Parent=Thaps24974;constitutive=1;rank=2 chr15 . exon 209609 210793 . - . ID=Thaps24974.1;Parent=Thaps24974;constitutive=1;rank=1 chr15 . exon 218397 218415 . + . ID=Thaps10085.4;Parent=Thaps10085;constitutive=1;ensembl_end_phase=1;rank=4 chr15 ensembl protein_coding_gene 219963 222961 . - . ID=Thaps12645;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD57];external_name=Thaps12645;logic_name=jgi_thaps3 chr15 ensembl transcript 219963 222961 . - . ID=Thaps12645;Parent=Thaps12645;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 219963 221357 . - 0 ID=Thaps12645;Parent=Thaps12645;rank=6 chr15 . exon 219963 221357 . - . ID=Thaps12645.6;Parent=Thaps12645;constitutive=1;rank=6 chr15 . CDS 221513 221977 . - 0 ID=Thaps12645;Parent=Thaps12645;rank=5 chr15 . exon 221513 221977 . - . ID=Thaps12645.5;Parent=Thaps12645;constitutive=1;rank=5 chr15 . CDS 222032 222188 . - 0 ID=Thaps12645;Parent=Thaps12645;rank=4 chr15 . exon 222032 222188 . - . ID=Thaps12645.4;Parent=Thaps12645;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 222243 222517 . - 0 ID=Thaps12645;Parent=Thaps12645;rank=3 chr15 . exon 222243 222517 . - . ID=Thaps12645.3;Parent=Thaps12645;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 222605 222696 . - 0 ID=Thaps12645;Parent=Thaps12645;rank=2 chr15 . exon 222605 222696 . - . ID=Thaps12645.2;Parent=Thaps12645;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 222781 222961 . - 0 ID=Thaps12645;Parent=Thaps12645;rank=1 chr15 . exon 222781 222961 . - . ID=Thaps12645.1;Parent=Thaps12645;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 224254 226222 . - . ID=Thaps37637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD58];external_name=Thaps37637;logic_name=jgi_thaps3 chr15 ensembl transcript 224254 226222 . - . ID=Thaps37637;Parent=Thaps37637;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 224254 224413 . - 0 ID=Thaps37637;Parent=Thaps37637;rank=5 chr15 . exon 224254 224413 . - . ID=Thaps37637.5;Parent=Thaps37637;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 224514 224747 . - 0 ID=Thaps37637;Parent=Thaps37637;rank=4 chr15 . exon 224514 224747 . - . ID=Thaps37637.4;Parent=Thaps37637;constitutive=1;rank=4 chr15 . CDS 224826 224914 . - 0 ID=Thaps37637;Parent=Thaps37637;rank=3 chr15 . exon 224826 224914 . - . ID=Thaps37637.3;Parent=Thaps37637;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 225010 225819 . - 0 ID=Thaps37637;Parent=Thaps37637;rank=2 chr15 . exon 225010 225819 . - . ID=Thaps37637.2;Parent=Thaps37637;constitutive=1;rank=2 chr15 . CDS 225911 226222 . - 0 ID=Thaps37637;Parent=Thaps37637;rank=1 chr15 . exon 225911 226222 . - . ID=Thaps37637.1;Parent=Thaps37637;constitutive=1;rank=1 chr15 . repeat_region 229056 229099 . ? . description=dust chr15 . repeat_region 229109 229135 . ? . description=trf chr15 . repeat_region 233310 233352 . ? . description=dust chr15 . repeat_region 233321 233352 . ? . description=trf chr15 ensembl protein_coding_gene 229099 229810 . + . ID=Thaps10088;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD59];external_name=Thaps10088;logic_name=jgi_thaps3 chr15 ensembl transcript 229099 229810 . + . ID=Thaps10088;Parent=Thaps10088;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 229099 229383 . + 0 ID=Thaps10088;Parent=Thaps10088;rank=1 chr15 . exon 229099 229383 . + . ID=Thaps10088.1;Parent=Thaps10088;constitutive=1;rank=1 chr15 . CDS 229493 229810 . + 0 ID=Thaps10088;Parent=Thaps10088;rank=2 chr15 . exon 229493 229810 . + . ID=Thaps10088.2;Parent=Thaps10088;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 232385 233752 . - . ID=Thaps264282;biotype=protein_coding;description=Kinesin motor protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD61];external_name=Thaps264282;logic_name=jgi_thaps3 chr15 ensembl transcript 232385 233752 . - . ID=Thaps264282;Parent=Thaps264282;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 232385 233142 . - 0 ID=Thaps264282;Parent=Thaps264282;rank=4 chr15 . exon 232385 233142 . - . ID=Thaps264282.4;Parent=Thaps264282;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 233243 233263 . - 0 ID=Thaps264282;Parent=Thaps264282;rank=3 chr15 . exon 233243 233263 . - . ID=Thaps264282.3;Parent=Thaps264282;constitutive=1;rank=3 chr15 . CDS 233363 233614 . - 0 ID=Thaps264282;Parent=Thaps264282;rank=2 chr15 . exon 233363 233614 . - . ID=Thaps264282.2;Parent=Thaps264282;constitutive=1;rank=2 chr15 . CDS 233699 233752 . - 0 ID=Thaps264282;Parent=Thaps264282;rank=1 chr15 . exon 233699 233752 . - . ID=Thaps264282.1;Parent=Thaps264282;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 230011 232046 . - . ID=Thaps269819;biotype=protein_coding;description=Glycosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CD60];external_name=Thaps269819;logic_name=jgi_thaps3 chr15 ensembl transcript 230011 232046 . - . ID=Thaps269819;Parent=Thaps269819;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 230011 230937 . - 0 ID=Thaps269819;Parent=Thaps269819;rank=4 chr15 . exon 230011 230937 . - . ID=Thaps269819.4;Parent=Thaps269819;constitutive=1;rank=4 chr15 . CDS 231047 231234 . - 0 ID=Thaps269819;Parent=Thaps269819;rank=3 chr15 . exon 231047 231234 . - . ID=Thaps269819.3;Parent=Thaps269819;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 231328 231423 . - 0 ID=Thaps269819;Parent=Thaps269819;rank=2 chr15 . exon 231328 231423 . - . ID=Thaps269819.2;Parent=Thaps269819;constitutive=1;rank=2 chr15 . CDS 231608 232046 . - 0 ID=Thaps269819;Parent=Thaps269819;rank=1 chr15 . exon 231608 232046 . - . ID=Thaps269819.1;Parent=Thaps269819;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . repeat_region 244750 244942 . - . description=Harbinger4_TP chr15 ensembl protein_coding_gene 238539 239423 . + . ID=Thaps10091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD62];external_name=Thaps10091;logic_name=jgi_thaps3 chr15 ensembl transcript 238539 239423 . + . ID=Thaps10091;Parent=Thaps10091;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 238539 239423 . + 0 ID=Thaps10091;Parent=Thaps10091;rank=1 chr15 . exon 238539 239423 . + . ID=Thaps10091.1;Parent=Thaps10091;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 239683 240942 . - . ID=Thaps10092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD63];external_name=Thaps10092;logic_name=jgi_thaps3 chr15 ensembl transcript 239683 240942 . - . ID=Thaps10092;Parent=Thaps10092;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 239683 240942 . - 0 ID=Thaps10092;Parent=Thaps10092;rank=1 chr15 . exon 239683 240942 . - . ID=Thaps10092.1;Parent=Thaps10092;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 241342 242853 . + . ID=Thaps10093;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD64];external_name=Thaps10093;logic_name=jgi_thaps3 chr15 ensembl transcript 241342 242853 . + . ID=Thaps10093;Parent=Thaps10093;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 241342 242853 . + 0 ID=Thaps10093;Parent=Thaps10093;rank=1 chr15 . exon 241342 242853 . + . ID=Thaps10093.1;Parent=Thaps10093;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 245045 246568 . + . ID=Thaps10095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD66];external_name=Thaps10095;logic_name=jgi_thaps3 chr15 ensembl transcript 245045 246568 . + . ID=Thaps10095;Parent=Thaps10095;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 245045 245087 . + 0 ID=Thaps10095;Parent=Thaps10095;rank=1 chr15 . exon 245045 245087 . + . ID=Thaps10095.1;Parent=Thaps10095;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 245142 246568 . + 0 ID=Thaps10095;Parent=Thaps10095;rank=2 chr15 . exon 245142 246568 . + . ID=Thaps10095.2;Parent=Thaps10095;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 247341 248273 . + . ID=Thaps10096;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD67];external_name=Thaps10096;logic_name=jgi_thaps3 chr15 ensembl transcript 247341 248273 . + . ID=Thaps10096;Parent=Thaps10096;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 247341 248273 . + 0 ID=Thaps10096;Parent=Thaps10096;rank=1 chr15 . exon 247341 248273 . + . ID=Thaps10096.1;Parent=Thaps10096;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 243034 244215 . - . ID=Thaps24977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD65];external_name=Thaps24977;logic_name=jgi_thaps3 chr15 ensembl transcript 243034 244215 . - . ID=Thaps24977;Parent=Thaps24977;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 243034 244215 . - 0 ID=Thaps24977;Parent=Thaps24977;rank=1 chr15 . exon 243034 244215 . - . ID=Thaps24977.1;Parent=Thaps24977;constitutive=1;rank=1 chr15 . repeat_region 250964 262642 . ? . description=dust chr15 ensembl protein_coding_gene 249180 250560 . + . ID=Thaps24978;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD68];external_name=Thaps24978;logic_name=jgi_thaps3 chr15 ensembl transcript 249180 250560 . + . ID=Thaps24978;Parent=Thaps24978;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 249180 249641 . + 0 ID=Thaps24978;Parent=Thaps24978;rank=1 chr15 . exon 249180 249641 . + . ID=Thaps24978.1;Parent=Thaps24978;constitutive=1;rank=1 chr15 . CDS 249740 249796 . + 0 ID=Thaps24978;Parent=Thaps24978;rank=2 chr15 . exon 249740 249796 . + . ID=Thaps24978.2;Parent=Thaps24978;constitutive=1;rank=2 chr15 . CDS 249938 249994 . + 0 ID=Thaps24978;Parent=Thaps24978;rank=3 chr15 . exon 249938 249994 . + . ID=Thaps24978.3;Parent=Thaps24978;constitutive=1;rank=3 chr15 . CDS 250103 250169 . + 0 ID=Thaps24978;Parent=Thaps24978;rank=4 chr15 . exon 250103 250169 . + . ID=Thaps24978.4;Parent=Thaps24978;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 250277 250333 . + 0 ID=Thaps24978;Parent=Thaps24978;rank=5 chr15 . exon 250277 250333 . + . ID=Thaps24978.5;Parent=Thaps24978;constitutive=1;rank=5 chr15 . CDS 250505 250560 . + 0 ID=Thaps24978;Parent=Thaps24978;rank=6 chr15 . exon 250505 250560 . + . ID=Thaps24978.6;Parent=Thaps24978;constitutive=1;ensembl_end_phase=2;rank=6 chr15 . repeat_region 262643 264244 . - . description=Copia1I_TP chr15 . repeat_region 264245 264486 . - . description=Copia1LTR_TP chr15 . repeat_region 265168 265570 . + . description=Harbinger2N_TP chr15 . repeat_region 265392 265480 . ? . description=trf chr15 . repeat_region 265427 265459 . ? . description=trf chr15 . repeat_region 265429 265469 . ? . description=trf chr15 . repeat_region 265571 265785 . - . description=Harbinger1_TP chr15 . repeat_region 265910 266026 . ? . description=trf chr15 ensembl protein_coding_gene 266468 267404 . + . ID=Thaps10098;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD69];external_name=Thaps10098;logic_name=jgi_thaps3 chr15 ensembl transcript 266468 267404 . + . ID=Thaps10098;Parent=Thaps10098;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 266468 267355 . + 0 ID=Thaps10098;Parent=Thaps10098;rank=1 chr15 . exon 266468 267355 . + . ID=Thaps10098.1;Parent=Thaps10098;constitutive=1;rank=1 chr15 . CDS 267399 267404 . + 0 ID=Thaps10098;Parent=Thaps10098;rank=2 chr15 . exon 267399 267404 . + . ID=Thaps10098.2;Parent=Thaps10098;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 267537 268658 . - . ID=Thaps10099;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD70];external_name=Thaps10099;logic_name=jgi_thaps3 chr15 ensembl transcript 267537 268658 . - . ID=Thaps10099;Parent=Thaps10099;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 267537 268658 . - 0 ID=Thaps10099;Parent=Thaps10099;rank=1 chr15 . exon 267537 268658 . - . ID=Thaps10099.1;Parent=Thaps10099;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 269025 271006 . + . ID=Thaps10100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD71];external_name=Thaps10100;logic_name=jgi_thaps3 chr15 ensembl transcript 269025 271006 . + . ID=Thaps10100;Parent=Thaps10100;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 269025 269983 . + 0 ID=Thaps10100;Parent=Thaps10100;rank=1 chr15 . exon 269025 269983 . + . ID=Thaps10100.1;Parent=Thaps10100;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 270242 270297 . + 0 ID=Thaps10100;Parent=Thaps10100;rank=2 chr15 . exon 270242 270297 . + . ID=Thaps10100.2;Parent=Thaps10100;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 270456 270602 . + 0 ID=Thaps10100;Parent=Thaps10100;rank=3 chr15 . exon 270456 270602 . + . ID=Thaps10100.3;Parent=Thaps10100;constitutive=1;rank=3 chr15 . CDS 270690 271006 . + 0 ID=Thaps10100;Parent=Thaps10100;rank=4 chr15 . exon 270690 271006 . + . ID=Thaps10100.4;Parent=Thaps10100;constitutive=1;ensembl_end_phase=2;rank=4 chr15 ensembl protein_coding_gene 271900 272415 . - . ID=Thaps10101;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD72];external_name=Thaps10101;logic_name=jgi_thaps3 chr15 ensembl transcript 271900 272415 . - . ID=Thaps10101;Parent=Thaps10101;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 271900 272415 . - 0 ID=Thaps10101;Parent=Thaps10101;rank=1 chr15 . exon 271900 272415 . - . ID=Thaps10101.1;Parent=Thaps10101;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 273931 274822 . + . ID=Thaps37585;biotype=protein_coding;description=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CD73];external_name=Thaps37585;logic_name=jgi_thaps3 chr15 ensembl transcript 273931 274822 . + . ID=Thaps37585;Parent=Thaps37585;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 273931 274144 . + 0 ID=Thaps37585;Parent=Thaps37585;rank=1 chr15 . exon 273931 274144 . + . ID=Thaps37585.1;Parent=Thaps37585;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 274416 274822 . + 0 ID=Thaps37585;Parent=Thaps37585;rank=2 chr15 . exon 274416 274822 . + . ID=Thaps37585.2;Parent=Thaps37585;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 275121 276612 . - . ID=Thaps37740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD74];external_name=Thaps37740;logic_name=jgi_thaps3 chr15 ensembl transcript 275121 276612 . - . ID=Thaps37740;Parent=Thaps37740;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 275121 275739 . - 0 ID=Thaps37740;Parent=Thaps37740;rank=3 chr15 . exon 275121 275739 . - . ID=Thaps37740.3;Parent=Thaps37740;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 275822 275894 . - 0 ID=Thaps37740;Parent=Thaps37740;rank=2 chr15 . exon 275822 275894 . - . ID=Thaps37740.2;Parent=Thaps37740;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 276081 276612 . - 0 ID=Thaps37740;Parent=Thaps37740;rank=1 chr15 . exon 276081 276612 . - . ID=Thaps37740.1;Parent=Thaps37740;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . repeat_region 278183 278298 . ? . description=trf chr15 . repeat_region 278646 278676 . ? . description=trf chr15 . repeat_region 278646 278676 . ? . description=dust chr15 . repeat_region 279434 279454 . ? . description=dust chr15 . repeat_region 283150 283213 . ? . description=dust chr15 ensembl protein_coding_gene 283391 286093 . - . ID=Thaps10106;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD77];external_name=Thaps10106;logic_name=jgi_thaps3 chr15 ensembl transcript 283391 286093 . - . ID=Thaps10106;Parent=Thaps10106;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 283391 286093 . - 0 ID=Thaps10106;Parent=Thaps10106;rank=1 chr15 . exon 283391 286093 . - . ID=Thaps10106.1;Parent=Thaps10106;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 278309 278812 . - . ID=Thaps37642;biotype=protein_coding;description=Nascent-polypeptide-associated complex alpha polypeptide-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD75];external_name=Thaps37642;logic_name=jgi_thaps3 chr15 ensembl transcript 278309 278812 . - . ID=Thaps37642;Parent=Thaps37642;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 278309 278812 . - 0 ID=Thaps37642;Parent=Thaps37642;rank=1 chr15 . exon 278309 278812 . - . ID=Thaps37642.1;Parent=Thaps37642;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 281003 283168 . + . ID=Thaps37705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD76];external_name=Thaps37705;logic_name=jgi_thaps3 chr15 ensembl transcript 281003 283168 . + . ID=Thaps37705;Parent=Thaps37705;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 281003 281093 . + 0 ID=Thaps37705;Parent=Thaps37705;rank=1 chr15 . exon 281003 281093 . + . ID=Thaps37705.1;Parent=Thaps37705;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 281148 281351 . + 0 ID=Thaps37705;Parent=Thaps37705;rank=2 chr15 . exon 281148 281351 . + . ID=Thaps37705.2;Parent=Thaps37705;constitutive=1;rank=2 chr15 . CDS 281460 282044 . + 0 ID=Thaps37705;Parent=Thaps37705;rank=3 chr15 . exon 281460 282044 . + . ID=Thaps37705.3;Parent=Thaps37705;constitutive=1;rank=3 chr15 . CDS 282468 283168 . + 0 ID=Thaps37705;Parent=Thaps37705;rank=4 chr15 . exon 282468 283168 . + . ID=Thaps37705.4;Parent=Thaps37705;constitutive=1;ensembl_end_phase=2;rank=4 chr15 ensembl protein_coding_gene 289763 291628 . + . ID=Thaps10109;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD80];external_name=Thaps10109;logic_name=jgi_thaps3 chr15 ensembl transcript 289763 291628 . + . ID=Thaps10109;Parent=Thaps10109;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 289763 291628 . + 0 ID=Thaps10109;Parent=Thaps10109;rank=1 chr15 . exon 289763 291628 . + . ID=Thaps10109.1;Parent=Thaps10109;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 292837 294075 . + . ID=Thaps10111;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD81];external_name=Thaps10111;logic_name=jgi_thaps3 chr15 ensembl transcript 292837 294075 . + . ID=Thaps10111;Parent=Thaps10111;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 292837 294075 . + 0 ID=Thaps10111;Parent=Thaps10111;rank=1 chr15 . exon 292837 294075 . + . ID=Thaps10111.1;Parent=Thaps10111;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 288836 289276 . - . ID=Thaps24980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD79];external_name=Thaps24980;logic_name=jgi_thaps3 chr15 ensembl transcript 288836 289276 . - . ID=Thaps24980;Parent=Thaps24980;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 288836 289276 . - 0 ID=Thaps24980;Parent=Thaps24980;rank=1 chr15 . exon 288836 289276 . - . ID=Thaps24980.1;Parent=Thaps24980;constitutive=1;rank=1 chr15 ensembl gene 291825 292621 . - . ID=Thaps264285;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr15 ensembl transcript 291825 292621 . - . ID=Thaps264285;Parent=Thaps264285;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr15 . exon 291825 292380 . - . ID=Thaps264285.2;Parent=Thaps264285;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . exon 292447 292621 . - . ID=Thaps264285.1;Parent=Thaps264285;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 287374 287586 . + . ID=Thaps37584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD78];external_name=Thaps37584;logic_name=jgi_thaps3 chr15 ensembl transcript 287374 287586 . + . ID=Thaps37584;Parent=Thaps37584;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 287374 287586 . + 0 ID=Thaps37584;Parent=Thaps37584;rank=1 chr15 . exon 287374 287586 . + . ID=Thaps37584.1;Parent=Thaps37584;constitutive=1;rank=1 chr15 . repeat_region 299890 299915 . ? . description=trf chr15 . biological_region 301014 301018 0.999 + . logic_name=eponine chr15 ensembl protein_coding_gene 302777 304049 . - . ID=Thaps10115;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD84];external_name=Thaps10115;logic_name=jgi_thaps3 chr15 ensembl transcript 302777 304049 . - . ID=Thaps10115;Parent=Thaps10115;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 302777 303635 . - 0 ID=Thaps10115;Parent=Thaps10115;rank=3 chr15 . exon 302777 303635 . - . ID=Thaps10115.3;Parent=Thaps10115;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 303719 303818 . - 0 ID=Thaps10115;Parent=Thaps10115;rank=2 chr15 . exon 303719 303818 . - . ID=Thaps10115.2;Parent=Thaps10115;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 303929 304049 . - 0 ID=Thaps10115;Parent=Thaps10115;rank=1 chr15 . exon 303929 304049 . - . ID=Thaps10115.1;Parent=Thaps10115;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 297779 299530 . + . ID=Thaps24981;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD82];external_name=Thaps24981;logic_name=jgi_thaps3 chr15 ensembl transcript 297779 299530 . + . ID=Thaps24981;Parent=Thaps24981;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 297779 299530 . + 0 ID=Thaps24981;Parent=Thaps24981;rank=1 chr15 . exon 297779 299530 . + . ID=Thaps24981.1;Parent=Thaps24981;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 304349 306934 . - . ID=Thaps24982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD85];external_name=Thaps24982;logic_name=jgi_thaps3 chr15 ensembl transcript 304349 306934 . - . ID=Thaps24982;Parent=Thaps24982;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 304349 305677 . - 0 ID=Thaps24982;Parent=Thaps24982;rank=2 chr15 . exon 304349 305677 . - . ID=Thaps24982.2;Parent=Thaps24982;constitutive=1;rank=2 chr15 . CDS 305729 306934 . - 0 ID=Thaps24982;Parent=Thaps24982;rank=1 chr15 . exon 305729 306934 . - . ID=Thaps24982.1;Parent=Thaps24982;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 301514 302294 . + . ID=Thaps37592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD83];external_name=Thaps37592;logic_name=jgi_thaps3 chr15 ensembl transcript 301514 302294 . + . ID=Thaps37592;Parent=Thaps37592;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 301514 301724 . + 0 ID=Thaps37592;Parent=Thaps37592;rank=1 chr15 . exon 301514 301724 . + . ID=Thaps37592.1;Parent=Thaps37592;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 301813 302294 . + 0 ID=Thaps37592;Parent=Thaps37592;rank=2 chr15 . exon 301813 302294 . + . ID=Thaps37592.2;Parent=Thaps37592;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . repeat_region 313382 313396 . ? . description=dust chr15 ensembl protein_coding_gene 310950 311198 . - . ID=Thaps18775;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD88];external_name=Thaps18775;logic_name=jgi_thaps3 chr15 ensembl transcript 310950 311198 . - . ID=Thaps18775;Parent=Thaps18775;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 310950 311198 . - 0 ID=Thaps18775;Parent=Thaps18775;rank=1 chr15 . exon 310950 311198 . - . ID=Thaps18775.1;Parent=Thaps18775;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 309451 309747 . - . ID=Thaps264289;biotype=protein_coding;description=Heat shock protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD87];external_name=Thaps264289;logic_name=jgi_thaps3 chr15 ensembl transcript 309451 309747 . - . ID=Thaps264289;Parent=Thaps264289;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 309451 309747 . - 0 ID=Thaps264289;Parent=Thaps264289;rank=1 chr15 . exon 309451 309747 . - . ID=Thaps264289.1;Parent=Thaps264289;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 307724 309249 . + . ID=Thaps269820;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD86];external_name=Thaps269820;logic_name=jgi_thaps3 chr15 ensembl transcript 307724 309249 . + . ID=Thaps269820;Parent=Thaps269820;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 307724 308018 . + 0 ID=Thaps269820;Parent=Thaps269820;rank=1 chr15 . exon 307724 308018 . + . ID=Thaps269820.1;Parent=Thaps269820;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 308301 308417 . + 0 ID=Thaps269820;Parent=Thaps269820;rank=2 chr15 . exon 308301 308417 . + . ID=Thaps269820.2;Parent=Thaps269820;constitutive=1;rank=2 chr15 . CDS 308655 308989 . + 0 ID=Thaps269820;Parent=Thaps269820;rank=3 chr15 . exon 308655 308989 . + . ID=Thaps269820.3;Parent=Thaps269820;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 309070 309249 . + 0 ID=Thaps269820;Parent=Thaps269820;rank=4 chr15 . exon 309070 309249 . + . ID=Thaps269820.4;Parent=Thaps269820;constitutive=1;rank=4 chr15 ensembl protein_coding_gene 312828 313145 . + . ID=Thaps37707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD89];external_name=Thaps37707;logic_name=jgi_thaps3 chr15 ensembl transcript 312828 313145 . + . ID=Thaps37707;Parent=Thaps37707;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 312828 313145 . + 0 ID=Thaps37707;Parent=Thaps37707;rank=1 chr15 . exon 312828 313145 . + . ID=Thaps37707.1;Parent=Thaps37707;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 323779 325470 . + . ID=Thaps10123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD90];external_name=Thaps10123;logic_name=jgi_thaps3 chr15 ensembl transcript 323779 325470 . + . ID=Thaps10123;Parent=Thaps10123;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 323779 325470 . + 0 ID=Thaps10123;Parent=Thaps10123;rank=1 chr15 . exon 323779 325470 . + . ID=Thaps10123.1;Parent=Thaps10123;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 336759 338320 . + . ID=Thaps10128;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD95];external_name=Thaps10128;logic_name=jgi_thaps3 chr15 ensembl transcript 336759 338320 . + . ID=Thaps10128;Parent=Thaps10128;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 336759 337042 . + 0 ID=Thaps10128;Parent=Thaps10128;rank=1 chr15 . exon 336759 337042 . + . ID=Thaps10128.1;Parent=Thaps10128;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 337235 337469 . + 0 ID=Thaps10128;Parent=Thaps10128;rank=2 chr15 . CDS 338042 338320 . + 0 ID=Thaps10128;Parent=Thaps10128;rank=3 chr15 ensembl protein_coding_gene 329523 331073 . - . ID=Thaps24988;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD92];external_name=Thaps24988;logic_name=jgi_thaps3 chr15 ensembl transcript 329523 331073 . - . ID=Thaps24988;Parent=Thaps24988;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 329523 331073 . - 0 ID=Thaps24988;Parent=Thaps24988;rank=1 chr15 . exon 329523 331073 . - . ID=Thaps24988.1;Parent=Thaps24988;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 331477 332867 . + . ID=Thaps24989;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD93];external_name=Thaps24989;logic_name=jgi_thaps3 chr15 ensembl transcript 331477 332867 . + . ID=Thaps24989;Parent=Thaps24989;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 331477 331491 . + 0 ID=Thaps24989;Parent=Thaps24989;rank=1 chr15 . exon 331477 331491 . + . ID=Thaps24989.1;Parent=Thaps24989;constitutive=1;rank=1 chr15 . CDS 331590 332052 . + 0 ID=Thaps24989;Parent=Thaps24989;rank=2 chr15 . exon 331590 332052 . + . ID=Thaps24989.2;Parent=Thaps24989;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 332074 332867 . + 0 ID=Thaps24989;Parent=Thaps24989;rank=3 chr15 . exon 332074 332867 . + . ID=Thaps24989.3;Parent=Thaps24989;constitutive=1;ensembl_end_phase=2;rank=3 chr15 ensembl protein_coding_gene 333141 336097 . - . ID=Thaps24990;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD94];external_name=Thaps24990;logic_name=jgi_thaps3 chr15 ensembl transcript 333141 336097 . - . ID=Thaps24990;Parent=Thaps24990;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 333141 333182 . - 0 ID=Thaps24990;Parent=Thaps24990;rank=5 chr15 . exon 333141 333182 . - . ID=Thaps24990.5;Parent=Thaps24990;constitutive=1;rank=5 chr15 . CDS 333277 334330 . - 0 ID=Thaps24990;Parent=Thaps24990;rank=4 chr15 . exon 333277 334330 . - . ID=Thaps24990.4;Parent=Thaps24990;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 334451 334848 . - 0 ID=Thaps24990;Parent=Thaps24990;rank=3 chr15 . exon 334451 334848 . - . ID=Thaps24990.3;Parent=Thaps24990;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 334886 334925 . - 0 ID=Thaps24990;Parent=Thaps24990;rank=2 chr15 . exon 334886 334925 . - . ID=Thaps24990.2;Parent=Thaps24990;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 335175 336097 . - 0 ID=Thaps24990;Parent=Thaps24990;rank=1 chr15 . exon 335175 336097 . - . ID=Thaps24990.1;Parent=Thaps24990;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 327718 328131 . + . ID=Thaps37683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD91];external_name=Thaps37683;logic_name=jgi_thaps3 chr15 ensembl transcript 327718 328131 . + . ID=Thaps37683;Parent=Thaps37683;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 327718 328131 . + 0 ID=Thaps37683;Parent=Thaps37683;rank=1 chr15 . exon 327718 328131 . + . ID=Thaps37683.1;Parent=Thaps37683;constitutive=1;rank=1 chr15 . repeat_region 340767 340779 . ? . description=dust chr15 . repeat_region 341337 341382 . ? . description=trf chr15 . repeat_region 341337 341384 . ? . description=trf chr15 . repeat_region 341337 341384 . ? . description=dust chr15 . exon 337235 337469 . + . ID=Thaps10128.2;Parent=Thaps10128;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . exon 338042 338320 . + . ID=Thaps10128.3;Parent=Thaps10128;constitutive=1;rank=3 chr15 ensembl protein_coding_gene 338673 339218 . - . ID=Thaps10129;biotype=protein_coding;description=D-tyrosyl-tRNA(Tyr) deacylase [Source:UniProtKB/TrEMBL%3BAcc:B8CD96];external_name=Thaps10129;logic_name=jgi_thaps3 chr15 ensembl transcript 338673 339218 . - . ID=Thaps10129;Parent=Thaps10129;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 338673 339218 . - 0 ID=Thaps10129;Parent=Thaps10129;rank=1 chr15 . exon 338673 339218 . - . ID=Thaps10129.1;Parent=Thaps10129;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 339720 341897 . + . ID=Thaps24991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD97];external_name=Thaps24991;logic_name=jgi_thaps3 chr15 ensembl transcript 339720 341897 . + . ID=Thaps24991;Parent=Thaps24991;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 339720 341155 . + 0 ID=Thaps24991;Parent=Thaps24991;rank=1 chr15 . exon 339720 341155 . + . ID=Thaps24991.1;Parent=Thaps24991;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 341253 341277 . + 0 ID=Thaps24991;Parent=Thaps24991;rank=2 chr15 . exon 341253 341277 . + . ID=Thaps24991.2;Parent=Thaps24991;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 341448 341897 . + 0 ID=Thaps24991;Parent=Thaps24991;rank=3 chr15 . exon 341448 341897 . + . ID=Thaps24991.3;Parent=Thaps24991;constitutive=1;rank=3 chr15 ensembl protein_coding_gene 346347 348967 . - . ID=Thaps24993;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD99];external_name=Thaps24993;logic_name=jgi_thaps3 chr15 ensembl transcript 346347 348967 . - . ID=Thaps24993;Parent=Thaps24993;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 346347 347599 . - 0 ID=Thaps24993;Parent=Thaps24993;rank=3 chr15 . exon 346347 347599 . - . ID=Thaps24993.3;Parent=Thaps24993;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 347678 348280 . - 0 ID=Thaps24993;Parent=Thaps24993;rank=2 chr15 . CDS 348352 348967 . - 0 ID=Thaps24993;Parent=Thaps24993;rank=1 chr15 ensembl protein_coding_gene 342042 343750 . - . ID=Thaps269821;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CD98];external_name=Thaps269821;logic_name=jgi_thaps3 chr15 ensembl transcript 342042 343750 . - . ID=Thaps269821;Parent=Thaps269821;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 342042 342703 . - 0 ID=Thaps269821;Parent=Thaps269821;rank=4 chr15 . exon 342042 342703 . - . ID=Thaps269821.4;Parent=Thaps269821;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 342790 342957 . - 0 ID=Thaps269821;Parent=Thaps269821;rank=3 chr15 . exon 342790 342957 . - . ID=Thaps269821.3;Parent=Thaps269821;constitutive=1;rank=3 chr15 . CDS 343117 343249 . - 0 ID=Thaps269821;Parent=Thaps269821;rank=2 chr15 . exon 343117 343249 . - . ID=Thaps269821.2;Parent=Thaps269821;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 343298 343750 . - 0 ID=Thaps269821;Parent=Thaps269821;rank=1 chr15 . exon 343298 343750 . - . ID=Thaps269821.1;Parent=Thaps269821;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 350479 351399 . + . ID=Thaps10133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDA0];external_name=Thaps10133;logic_name=jgi_thaps3 chr15 ensembl transcript 350479 351399 . + . ID=Thaps10133;Parent=Thaps10133;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 350479 351399 . + 0 ID=Thaps10133;Parent=Thaps10133;rank=1 chr15 . exon 350479 351399 . + . ID=Thaps10133.1;Parent=Thaps10133;constitutive=1;rank=1 chr15 . exon 347678 348280 . - . ID=Thaps24993.2;Parent=Thaps24993;constitutive=1;rank=2 chr15 . exon 348352 348967 . - . ID=Thaps24993.1;Parent=Thaps24993;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 355284 357313 . - . ID=Thaps37748;biotype=protein_coding;description=Nuclear vcp-like-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDA1];external_name=Thaps37748;logic_name=jgi_thaps3 chr15 ensembl transcript 355284 357313 . - . ID=Thaps37748;Parent=Thaps37748;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 355284 355656 . - 0 ID=Thaps37748;Parent=Thaps37748;rank=4 chr15 . exon 355284 355656 . - . ID=Thaps37748.4;Parent=Thaps37748;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 355731 356065 . - 0 ID=Thaps37748;Parent=Thaps37748;rank=3 chr15 . exon 355731 356065 . - . ID=Thaps37748.3;Parent=Thaps37748;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 356144 356529 . - 0 ID=Thaps37748;Parent=Thaps37748;rank=2 chr15 . exon 356144 356529 . - . ID=Thaps37748.2;Parent=Thaps37748;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 356593 357313 . - 0 ID=Thaps37748;Parent=Thaps37748;rank=1 chr15 . exon 356593 357313 . - . ID=Thaps37748.1;Parent=Thaps37748;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . repeat_region 358196 358247 . ? . description=dust chr15 . repeat_region 358204 358247 . ? . description=trf chr15 . repeat_region 360433 360469 . ? . description=dust chr15 . repeat_region 365307 365378 . ? . description=dust chr15 . repeat_region 365347 365378 . ? . description=trf chr15 ensembl protein_coding_gene 364243 368879 . + . ID=Thaps10136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDA4];external_name=Thaps10136;logic_name=jgi_thaps3 chr15 ensembl transcript 364243 368879 . + . ID=Thaps10136;Parent=Thaps10136;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 364243 364541 . + 0 ID=Thaps10136;Parent=Thaps10136;rank=1 chr15 . exon 364243 364541 . + . ID=Thaps10136.1;Parent=Thaps10136;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 364730 364906 . + 0 ID=Thaps10136;Parent=Thaps10136;rank=2 chr15 . exon 364730 364906 . + . ID=Thaps10136.2;Parent=Thaps10136;constitutive=1;rank=2 chr15 . CDS 365403 365450 . + 0 ID=Thaps10136;Parent=Thaps10136;rank=3 chr15 . exon 365403 365450 . + . ID=Thaps10136.3;Parent=Thaps10136;constitutive=1;rank=3 chr15 . CDS 365549 368879 . + 0 ID=Thaps10136;Parent=Thaps10136;rank=4 chr15 . exon 365549 368879 . + . ID=Thaps10136.4;Parent=Thaps10136;constitutive=1;ensembl_end_phase=1;rank=4 chr15 ensembl protein_coding_gene 358907 360411 . - . ID=Thaps264293;biotype=protein_coding;description=Trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8CDA2];external_name=Thaps264293;logic_name=jgi_thaps3 chr15 ensembl transcript 358907 360411 . - . ID=Thaps264293;Parent=Thaps264293;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 358907 359414 . - 0 ID=Thaps264293;Parent=Thaps264293;rank=4 chr15 . exon 358907 359414 . - . ID=Thaps264293.4;Parent=Thaps264293;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 359508 359814 . - 0 ID=Thaps264293;Parent=Thaps264293;rank=3 chr15 . exon 359508 359814 . - . ID=Thaps264293.3;Parent=Thaps264293;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 359881 359999 . - 0 ID=Thaps264293;Parent=Thaps264293;rank=2 chr15 . exon 359881 359999 . - . ID=Thaps264293.2;Parent=Thaps264293;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 360138 360411 . - 0 ID=Thaps264293;Parent=Thaps264293;rank=1 chr15 . exon 360138 360411 . - . ID=Thaps264293.1;Parent=Thaps264293;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 361608 363952 . + . ID=Thaps771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDA3];external_name=Thaps771;logic_name=jgi_thaps3 chr15 ensembl transcript 361608 363952 . + . ID=Thaps771;Parent=Thaps771;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 361608 361660 . + 0 ID=Thaps771;Parent=Thaps771;rank=1 chr15 . exon 361608 361660 . + . ID=Thaps771.1;Parent=Thaps771;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 361923 362248 . + 0 ID=Thaps771;Parent=Thaps771;rank=2 chr15 . exon 361923 362248 . + . ID=Thaps771.2;Parent=Thaps771;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 362438 362567 . + 0 ID=Thaps771;Parent=Thaps771;rank=3 chr15 . exon 362438 362567 . + . ID=Thaps771.3;Parent=Thaps771;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 362713 362823 . + 0 ID=Thaps771;Parent=Thaps771;rank=4 chr15 . exon 362713 362823 . + . ID=Thaps771.4;Parent=Thaps771;constitutive=1;rank=4 chr15 . CDS 362900 362978 . + 0 ID=Thaps771;Parent=Thaps771;rank=5 chr15 . exon 362900 362978 . + . ID=Thaps771.5;Parent=Thaps771;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 363078 363238 . + 0 ID=Thaps771;Parent=Thaps771;rank=6 chr15 . exon 363078 363238 . + . ID=Thaps771.6;Parent=Thaps771;constitutive=1;ensembl_end_phase=2;rank=6 chr15 . CDS 363327 363460 . + 0 ID=Thaps771;Parent=Thaps771;rank=7 chr15 . exon 363327 363460 . + . ID=Thaps771.7;Parent=Thaps771;constitutive=1;ensembl_end_phase=2;rank=7 chr15 . CDS 363882 363952 . + 0 ID=Thaps771;Parent=Thaps771;rank=8 chr15 . exon 363882 363952 . + . ID=Thaps771.8;Parent=Thaps771;constitutive=1;ensembl_end_phase=2;rank=8 chr15 ensembl protein_coding_gene 371649 372560 . - . ID=Thaps24996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDC8];external_name=Thaps24996;logic_name=jgi_thaps3 chr15 ensembl transcript 371649 372560 . - . ID=Thaps24996;Parent=Thaps24996;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 371649 372560 . - 0 ID=Thaps24996;Parent=Thaps24996;rank=1 chr15 . exon 371649 372560 . - . ID=Thaps24996.1;Parent=Thaps24996;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 373374 378001 . + . ID=Thaps24997;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDC9];external_name=Thaps24997;logic_name=jgi_thaps3 chr15 ensembl transcript 373374 378001 . + . ID=Thaps24997;Parent=Thaps24997;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 373374 374382 . + 0 ID=Thaps24997;Parent=Thaps24997;rank=1 chr15 . exon 373374 374382 . + . ID=Thaps24997.1;Parent=Thaps24997;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 374658 374759 . + 0 ID=Thaps24997;Parent=Thaps24997;rank=2 chr15 . exon 374658 374759 . + . ID=Thaps24997.2;Parent=Thaps24997;constitutive=1;rank=2 chr15 . CDS 374829 375128 . + 0 ID=Thaps24997;Parent=Thaps24997;rank=3 chr15 . exon 374829 375128 . + . ID=Thaps24997.3;Parent=Thaps24997;constitutive=1;rank=3 chr15 . CDS 375208 377277 . + 0 ID=Thaps24997;Parent=Thaps24997;rank=4 chr15 . exon 375208 377277 . + . ID=Thaps24997.4;Parent=Thaps24997;constitutive=1;rank=4 chr15 . CDS 377395 377729 . + 0 ID=Thaps24997;Parent=Thaps24997;rank=5 chr15 . CDS 377855 378001 . + 0 ID=Thaps24997;Parent=Thaps24997;rank=6 chr15 ensembl protein_coding_gene 369535 370593 . - . ID=Thaps37710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDC7];external_name=Thaps37710;logic_name=jgi_thaps3 chr15 ensembl transcript 369535 370593 . - . ID=Thaps37710;Parent=Thaps37710;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 369535 370041 . - 0 ID=Thaps37710;Parent=Thaps37710;rank=2 chr15 . exon 369535 370041 . - . ID=Thaps37710.2;Parent=Thaps37710;constitutive=1;rank=2 chr15 . CDS 370282 370593 . - 0 ID=Thaps37710;Parent=Thaps37710;rank=1 chr15 . exon 370282 370593 . - . ID=Thaps37710.1;Parent=Thaps37710;constitutive=1;rank=1 chr15 . repeat_region 378626 379376 . + . description=Copia4I_TP chr15 . biological_region 382371 382373 0.999 + . logic_name=eponine chr15 ensembl protein_coding_gene 379514 382261 . - . ID=Thaps10140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDD0];external_name=Thaps10140;logic_name=jgi_thaps3 chr15 ensembl transcript 379514 382261 . - . ID=Thaps10140;Parent=Thaps10140;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 379514 379886 . - 0 ID=Thaps10140;Parent=Thaps10140;rank=2 chr15 . exon 379514 379886 . - . ID=Thaps10140.2;Parent=Thaps10140;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 379980 382261 . - 0 ID=Thaps10140;Parent=Thaps10140;rank=1 chr15 . exon 379980 382261 . - . ID=Thaps10140.1;Parent=Thaps10140;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 383895 384641 . - . ID=Thaps10142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDD2];external_name=Thaps10142;logic_name=jgi_thaps3 chr15 ensembl transcript 383895 384641 . - . ID=Thaps10142;Parent=Thaps10142;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 383895 383919 . - 0 ID=Thaps10142;Parent=Thaps10142;rank=2 chr15 . exon 383895 383919 . - . ID=Thaps10142.2;Parent=Thaps10142;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 383944 384641 . - 0 ID=Thaps10142;Parent=Thaps10142;rank=1 chr15 . exon 383944 384641 . - . ID=Thaps10142.1;Parent=Thaps10142;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 385139 386134 . - . ID=Thaps10143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDD3];external_name=Thaps10143;logic_name=jgi_thaps3 chr15 ensembl transcript 385139 386134 . - . ID=Thaps10143;Parent=Thaps10143;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 385139 386134 . - 0 ID=Thaps10143;Parent=Thaps10143;rank=1 chr15 . exon 385139 386134 . - . ID=Thaps10143.1;Parent=Thaps10143;constitutive=1;rank=1 chr15 . exon 377395 377729 . + . ID=Thaps24997.5;Parent=Thaps24997;constitutive=1;ensembl_end_phase=2;rank=5 chr15 . exon 377855 378001 . + . ID=Thaps24997.6;Parent=Thaps24997;constitutive=1;rank=6 chr15 ensembl protein_coding_gene 383357 383642 . + . ID=Thaps264295;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDD1];external_name=Thaps264295;logic_name=jgi_thaps3 chr15 ensembl transcript 383357 383642 . + . ID=Thaps264295;Parent=Thaps264295;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 383357 383642 . + 0 ID=Thaps264295;Parent=Thaps264295;rank=1 chr15 . exon 383357 383642 . + . ID=Thaps264295.1;Parent=Thaps264295;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . repeat_region 388509 388537 . ? . description=trf chr15 . repeat_region 388509 388549 . ? . description=dust chr15 . repeat_region 392778 392794 . ? . description=dust chr15 . repeat_region 393499 393516 . ? . description=dust chr15 . repeat_region 394164 394190 . ? . description=trf chr15 . repeat_region 396305 396335 . ? . description=dust chr15 ensembl tRNA_gene 393587 393659 . + . ID=EPrTPOG00000000117;biotype=tRNA;description=tRNA-Phe for anticodon GAA [Source:TRNASCAN_SE%3BAcc:tRNA-Phe];external_name=tRNA-Phe;logic_name=ncrna_eg chr15 ensembl transcript 393587 393659 . + . ID=EPrTPOT00000000117;Parent=EPrTPOG00000000117;biotype=tRNA;logic_name=ncrna_eg chr15 . exon 393587 393659 . + . ID=EPrTPOE00000000117;Parent=EPrTPOT00000000117;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 392357 393487 . - . ID=Thaps10146;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDD6];external_name=Thaps10146;logic_name=jgi_thaps3 chr15 ensembl transcript 392357 393487 . - . ID=Thaps10146;Parent=Thaps10146;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 392357 393487 . - 0 ID=Thaps10146;Parent=Thaps10146;rank=1 chr15 . exon 392357 393487 . - . ID=Thaps10146.1;Parent=Thaps10146;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 389753 392117 . + . ID=Thaps24999;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDD5];external_name=Thaps24999;logic_name=jgi_thaps3 chr15 ensembl transcript 389753 392117 . + . ID=Thaps24999;Parent=Thaps24999;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 389753 390054 . + 0 ID=Thaps24999;Parent=Thaps24999;rank=1 chr15 . exon 389753 390054 . + . ID=Thaps24999.1;Parent=Thaps24999;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 390134 390977 . + 0 ID=Thaps24999;Parent=Thaps24999;rank=2 chr15 . exon 390134 390977 . + . ID=Thaps24999.2;Parent=Thaps24999;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 391061 391230 . + 0 ID=Thaps24999;Parent=Thaps24999;rank=3 chr15 . exon 391061 391230 . + . ID=Thaps24999.3;Parent=Thaps24999;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 391308 391911 . + 0 ID=Thaps24999;Parent=Thaps24999;rank=4 chr15 . exon 391308 391911 . + . ID=Thaps24999.4;Parent=Thaps24999;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 391941 392117 . + 0 ID=Thaps24999;Parent=Thaps24999;rank=5 chr15 . exon 391941 392117 . + . ID=Thaps24999.5;Parent=Thaps24999;constitutive=1;rank=5 chr15 ensembl protein_coding_gene 386520 386900 . + . ID=Thaps264296;biotype=protein_coding;description=Phosphoglycerate mutase [Source:UniProtKB/TrEMBL%3BAcc:B8CDD4];external_name=Thaps264296;logic_name=jgi_thaps3 chr15 ensembl transcript 386520 386900 . + . ID=Thaps264296;Parent=Thaps264296;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 386520 386750 . + 0 ID=Thaps264296;Parent=Thaps264296;rank=1 chr15 . exon 386520 386750 . + . ID=Thaps264296.1;Parent=Thaps264296;constitutive=1;rank=1 chr15 . CDS 386775 386900 . + 0 ID=Thaps264296;Parent=Thaps264296;rank=2 chr15 . exon 386775 386900 . + . ID=Thaps264296.2;Parent=Thaps264296;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 394524 395740 . + . ID=Thaps264297;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDD7];external_name=Thaps264297;logic_name=jgi_thaps3 chr15 ensembl transcript 394524 395740 . + . ID=Thaps264297;Parent=Thaps264297;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 394524 394684 . + 0 ID=Thaps264297;Parent=Thaps264297;rank=1 chr15 . exon 394524 394684 . + . ID=Thaps264297.1;Parent=Thaps264297;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 394721 395740 . + 0 ID=Thaps264297;Parent=Thaps264297;rank=2 chr15 . exon 394721 395740 . + . ID=Thaps264297.2;Parent=Thaps264297;constitutive=1;rank=2 chr15 . repeat_region 400260 400596 . + . description=TE2c_TP chr15 . repeat_region 402835 402919 . + . description=PtCopiaLikeTe2 chr15 ensembl protein_coding_gene 397231 399866 . - . ID=Thaps10148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDD8];external_name=Thaps10148;logic_name=jgi_thaps3 chr15 ensembl transcript 397231 399866 . - . ID=Thaps10148;Parent=Thaps10148;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 397231 398941 . - 0 ID=Thaps10148;Parent=Thaps10148;rank=5 chr15 . exon 397231 398941 . - . ID=Thaps10148.5;Parent=Thaps10148;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 399022 399083 . - 0 ID=Thaps10148;Parent=Thaps10148;rank=4 chr15 . exon 399022 399083 . - . ID=Thaps10148.4;Parent=Thaps10148;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 399183 399279 . - 0 ID=Thaps10148;Parent=Thaps10148;rank=3 chr15 . exon 399183 399279 . - . ID=Thaps10148.3;Parent=Thaps10148;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 399381 399495 . - 0 ID=Thaps10148;Parent=Thaps10148;rank=2 chr15 . exon 399381 399495 . - . ID=Thaps10148.2;Parent=Thaps10148;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 399635 399866 . - 0 ID=Thaps10148;Parent=Thaps10148;rank=1 chr15 . exon 399635 399866 . - . ID=Thaps10148.1;Parent=Thaps10148;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 401170 401840 . - . ID=Thaps10149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDD9];external_name=Thaps10149;logic_name=jgi_thaps3 chr15 ensembl transcript 401170 401840 . - . ID=Thaps10149;Parent=Thaps10149;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 401170 401714 . - 0 ID=Thaps10149;Parent=Thaps10149;rank=2 chr15 . exon 401170 401714 . - . ID=Thaps10149.2;Parent=Thaps10149;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 401762 401840 . - 0 ID=Thaps10149;Parent=Thaps10149;rank=1 chr15 . exon 401762 401840 . - . ID=Thaps10149.1;Parent=Thaps10149;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 403631 406220 . + . ID=Thaps10150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDE0];external_name=Thaps10150;logic_name=jgi_thaps3 chr15 ensembl transcript 403631 406220 . + . ID=Thaps10150;Parent=Thaps10150;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 403631 404637 . + 0 ID=Thaps10150;Parent=Thaps10150;rank=1 chr15 . exon 403631 404637 . + . ID=Thaps10150.1;Parent=Thaps10150;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 404840 405526 . + 0 ID=Thaps10150;Parent=Thaps10150;rank=2 chr15 . exon 404840 405526 . + . ID=Thaps10150.2;Parent=Thaps10150;constitutive=1;rank=2 chr15 . CDS 405644 406220 . + 0 ID=Thaps10150;Parent=Thaps10150;rank=3 chr15 . exon 405644 406220 . + . ID=Thaps10150.3;Parent=Thaps10150;constitutive=1;ensembl_end_phase=1;rank=3 chr15 ensembl protein_coding_gene 406399 408077 . - . ID=Thaps10151;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDE1];external_name=Thaps10151;logic_name=jgi_thaps3 chr15 ensembl transcript 406399 408077 . - . ID=Thaps10151;Parent=Thaps10151;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 406399 406803 . - 0 ID=Thaps10151;Parent=Thaps10151;rank=2 chr15 . exon 406399 406803 . - . ID=Thaps10151.2;Parent=Thaps10151;constitutive=1;rank=2 chr15 . CDS 406902 408077 . - 0 ID=Thaps10151;Parent=Thaps10151;rank=1 chr15 . exon 406902 408077 . - . ID=Thaps10151.1;Parent=Thaps10151;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 408347 411645 . + . ID=Thaps25001;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDE2];external_name=Thaps25001;logic_name=jgi_thaps3 chr15 ensembl transcript 408347 411645 . + . ID=Thaps25001;Parent=Thaps25001;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 408347 408947 . + 0 ID=Thaps25001;Parent=Thaps25001;rank=1 chr15 . exon 408347 408947 . + . ID=Thaps25001.1;Parent=Thaps25001;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 408996 409561 . + 0 ID=Thaps25001;Parent=Thaps25001;rank=2 chr15 . exon 408996 409561 . + . ID=Thaps25001.2;Parent=Thaps25001;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 409633 410025 . + 0 ID=Thaps25001;Parent=Thaps25001;rank=3 chr15 . exon 409633 410025 . + . ID=Thaps25001.3;Parent=Thaps25001;constitutive=1;rank=3 chr15 . CDS 410152 411645 . + 0 ID=Thaps25001;Parent=Thaps25001;rank=4 chr15 . exon 410152 411645 . + . ID=Thaps25001.4;Parent=Thaps25001;constitutive=1;rank=4 chr15 ensembl protein_coding_gene 412521 413192 . - . ID=Thaps37576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDE3];external_name=Thaps37576;logic_name=jgi_thaps3 chr15 ensembl transcript 412521 413192 . - . ID=Thaps37576;Parent=Thaps37576;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 412521 412678 . - 0 ID=Thaps37576;Parent=Thaps37576;rank=2 chr15 . exon 412521 412678 . - . ID=Thaps37576.2;Parent=Thaps37576;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 412745 413192 . - 0 ID=Thaps37576;Parent=Thaps37576;rank=1 chr15 . exon 412745 413192 . - . ID=Thaps37576.1;Parent=Thaps37576;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 414666 416210 . - . ID=Thaps42508;biotype=protein_coding;description=Chromatin assembly factor [Source:UniProtKB/TrEMBL%3BAcc:B8CDE4];external_name=Thaps42508;logic_name=jgi_thaps3 chr15 ensembl transcript 414666 416210 . - . ID=Thaps42508;Parent=Thaps42508;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 414666 415781 . - 0 ID=Thaps42508;Parent=Thaps42508;rank=3 chr15 . exon 414666 415781 . - . ID=Thaps42508.3;Parent=Thaps42508;constitutive=1;rank=3 chr15 . CDS 415893 415976 . - 0 ID=Thaps42508;Parent=Thaps42508;rank=2 chr15 . exon 415893 415976 . - . ID=Thaps42508.2;Parent=Thaps42508;constitutive=1;rank=2 chr15 . CDS 416010 416210 . - 0 ID=Thaps42508;Parent=Thaps42508;rank=1 chr15 . exon 416010 416210 . - . ID=Thaps42508.1;Parent=Thaps42508;constitutive=1;rank=1 chr15 . repeat_region 418788 418831 . ? . description=trf chr15 ensembl protein_coding_gene 419228 422896 . + . ID=Thaps10156;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDE6];external_name=Thaps10156;logic_name=jgi_thaps3 chr15 ensembl transcript 419228 422896 . + . ID=Thaps10156;Parent=Thaps10156;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 419228 421621 . + 0 ID=Thaps10156;Parent=Thaps10156;rank=1 chr15 . exon 419228 421621 . + . ID=Thaps10156.1;Parent=Thaps10156;constitutive=1;rank=1 chr15 . CDS 421715 422584 . + 0 ID=Thaps10156;Parent=Thaps10156;rank=2 chr15 . exon 421715 422584 . + . ID=Thaps10156.2;Parent=Thaps10156;constitutive=1;rank=2 chr15 . CDS 422681 422896 . + 0 ID=Thaps10156;Parent=Thaps10156;rank=3 chr15 . exon 422681 422896 . + . ID=Thaps10156.3;Parent=Thaps10156;constitutive=1;rank=3 chr15 ensembl protein_coding_gene 423108 423800 . - . ID=Thaps10157;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDE7];external_name=Thaps10157;logic_name=jgi_thaps3 chr15 ensembl transcript 423108 423800 . - . ID=Thaps10157;Parent=Thaps10157;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 423108 423800 . - 0 ID=Thaps10157;Parent=Thaps10157;rank=1 chr15 . exon 423108 423800 . - . ID=Thaps10157.1;Parent=Thaps10157;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 424100 426700 . + . ID=Thaps10158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDE8];external_name=Thaps10158;logic_name=jgi_thaps3 chr15 ensembl transcript 424100 426700 . + . ID=Thaps10158;Parent=Thaps10158;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 424100 426700 . + 0 ID=Thaps10158;Parent=Thaps10158;rank=1 chr15 . exon 424100 426700 . + . ID=Thaps10158.1;Parent=Thaps10158;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 416521 417705 . - . ID=Thaps269826;biotype=protein_coding;description=Cyclin%2C cyclin d%2C cell cycle control [Source:UniProtKB/TrEMBL%3BAcc:B8CDE5];external_name=Thaps269826;logic_name=jgi_thaps3 chr15 ensembl transcript 416521 417705 . - . ID=Thaps269826;Parent=Thaps269826;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 416521 417283 . - 0 ID=Thaps269826;Parent=Thaps269826;rank=2 chr15 . exon 416521 417283 . - . ID=Thaps269826.2;Parent=Thaps269826;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 417389 417705 . - 0 ID=Thaps269826;Parent=Thaps269826;rank=1 chr15 . exon 417389 417705 . - . ID=Thaps269826.1;Parent=Thaps269826;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . repeat_region 427288 427349 . ? . description=dust chr15 . repeat_region 427726 427961 . + . description=Copia1LTR_TP chr15 . repeat_region 427962 428086 . + . description=Copia1I_TP chr15 . repeat_region 428088 428150 . ? . description=dust chr15 . repeat_region 429122 430179 . + . description=TE1_TP chr15 . repeat_region 434291 434340 . + . description=Harbinger3_TP chr15 ensembl protein_coding_gene 432257 433997 . - . ID=Thaps25005;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDE9];external_name=Thaps25005;logic_name=jgi_thaps3 chr15 ensembl transcript 432257 433997 . - . ID=Thaps25005;Parent=Thaps25005;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 432257 433324 . - 0 ID=Thaps25005;Parent=Thaps25005;rank=2 chr15 . exon 432257 433324 . - . ID=Thaps25005.2;Parent=Thaps25005;constitutive=1;rank=2 chr15 . CDS 433563 433997 . - 0 ID=Thaps25005;Parent=Thaps25005;rank=1 chr15 . exon 433563 433997 . - . ID=Thaps25005.1;Parent=Thaps25005;constitutive=1;rank=1 chr15 . repeat_region 437101 437153 . ? . description=trf chr15 ensembl gene 441911 443058 . + . ID=Thaps264303;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr15 ensembl transcript 441911 443058 . + . ID=Thaps264303;Parent=Thaps264303;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr15 . exon 441911 441950 . + . ID=Thaps264303.1;Parent=Thaps264303;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . exon 441962 443058 . + . ID=Thaps264303.2;Parent=Thaps264303;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 436931 440894 . + . ID=Thaps269828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDF0];external_name=Thaps269828;logic_name=jgi_thaps3 chr15 ensembl transcript 436931 440894 . + . ID=Thaps269828;Parent=Thaps269828;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 436931 437015 . + 0 ID=Thaps269828;Parent=Thaps269828;rank=1 chr15 . exon 436931 437015 . + . ID=Thaps269828.1;Parent=Thaps269828;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 437077 437096 . + 0 ID=Thaps269828;Parent=Thaps269828;rank=2 chr15 . exon 437077 437096 . + . ID=Thaps269828.2;Parent=Thaps269828;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 440520 440894 . + 0 ID=Thaps269828;Parent=Thaps269828;rank=3 chr15 . exon 440520 440894 . + . ID=Thaps269828.3;Parent=Thaps269828;constitutive=1;rank=3 chr15 . repeat_region 449310 449341 . ? . description=dust chr15 ensembl protein_coding_gene 452194 478680 . + . ID=Thaps10164;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDF4];external_name=Thaps10164;logic_name=jgi_thaps3 chr15 ensembl transcript 452194 478680 . + . ID=Thaps10164;Parent=Thaps10164;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 452194 453100 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=1 chr15 . exon 452194 453100 . + . ID=Thaps10164.1;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 453221 453582 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=2 chr15 . exon 453221 453582 . + . ID=Thaps10164.2;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 453714 454542 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=3 chr15 . exon 453714 454542 . + . ID=Thaps10164.3;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 454677 455243 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=4 chr15 . exon 454677 455243 . + . ID=Thaps10164.4;Parent=Thaps10164;constitutive=1;rank=4 chr15 . CDS 455327 455759 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=5 chr15 . exon 455327 455759 . + . ID=Thaps10164.5;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 455843 456297 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=6 chr15 . CDS 456713 457278 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=7 chr15 . CDS 457363 457424 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=8 chr15 . CDS 457504 458373 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=9 chr15 . CDS 458414 460140 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=10 chr15 . CDS 460214 460279 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=11 chr15 . CDS 460368 460400 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=12 chr15 . CDS 460484 461176 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=13 chr15 . CDS 461269 461406 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=14 chr15 . CDS 461487 461813 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=15 chr15 . CDS 461885 462549 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=16 chr15 . CDS 462624 462867 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=17 chr15 . CDS 462947 463156 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=18 chr15 . CDS 463357 463498 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=19 chr15 . CDS 463581 464025 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=20 chr15 . CDS 464127 464516 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=21 chr15 . CDS 464556 464933 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=22 chr15 . CDS 465034 465486 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=23 chr15 . CDS 465579 465727 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=24 chr15 . CDS 465805 466024 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=25 chr15 . CDS 466116 466605 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=26 chr15 . CDS 466683 466993 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=27 chr15 . CDS 467083 467319 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=28 chr15 . CDS 467397 467532 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=29 chr15 . CDS 467620 467638 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=30 chr15 . CDS 467715 467767 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=31 chr15 . CDS 467848 468084 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=32 chr15 . CDS 468191 468685 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=33 chr15 . CDS 468754 469179 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=34 chr15 . CDS 469267 469316 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=35 chr15 . CDS 469416 469516 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=36 chr15 . CDS 469627 469746 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=37 chr15 . CDS 469822 469925 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=38 chr15 . CDS 470017 470086 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=39 chr15 . CDS 470172 470209 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=40 chr15 . CDS 470405 470479 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=41 chr15 . CDS 470557 471282 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=42 chr15 . CDS 471361 471831 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=43 chr15 . CDS 471908 472079 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=44 chr15 . CDS 472164 472628 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=45 chr15 . CDS 472874 473007 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=46 chr15 . CDS 473087 473131 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=47 chr15 . CDS 473219 473309 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=48 chr15 . CDS 473385 473415 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=49 chr15 . CDS 473513 473950 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=50 chr15 . CDS 474101 475351 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=51 chr15 . CDS 475436 476138 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=52 chr15 . CDS 476183 476381 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=53 chr15 . CDS 476415 476624 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=54 chr15 . CDS 476705 477489 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=55 chr15 . CDS 477572 477656 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=56 chr15 . CDS 477846 478096 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=57 chr15 . CDS 478203 478568 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=58 chr15 . CDS 478649 478680 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=59 chr15 ensembl protein_coding_gene 449680 451081 . + . ID=Thaps13877;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDF3];external_name=Thaps13877;logic_name=jgi_thaps3 chr15 ensembl transcript 449680 451081 . + . ID=Thaps13877;Parent=Thaps13877;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 449680 449920 . + 0 ID=Thaps13877;Parent=Thaps13877;rank=1 chr15 . exon 449680 449920 . + . ID=Thaps13877.1;Parent=Thaps13877;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 450155 450306 . + 0 ID=Thaps13877;Parent=Thaps13877;rank=2 chr15 . exon 450155 450306 . + . ID=Thaps13877.2;Parent=Thaps13877;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 450395 451081 . + 0 ID=Thaps13877;Parent=Thaps13877;rank=3 chr15 . exon 450395 451081 . + . ID=Thaps13877.3;Parent=Thaps13877;constitutive=1;rank=3 chr15 ensembl protein_coding_gene 445946 447078 . + . ID=Thaps264305;biotype=protein_coding;description=Urea transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CDF1];external_name=Thaps264305;logic_name=jgi_thaps3 chr15 ensembl transcript 445946 447078 . + . ID=Thaps264305;Parent=Thaps264305;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 445946 446256 . + 0 ID=Thaps264305;Parent=Thaps264305;rank=1 chr15 . exon 445946 446256 . + . ID=Thaps264305.1;Parent=Thaps264305;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 446340 446422 . + 0 ID=Thaps264305;Parent=Thaps264305;rank=2 chr15 . exon 446340 446422 . + . ID=Thaps264305.2;Parent=Thaps264305;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 446519 447078 . + 0 ID=Thaps264305;Parent=Thaps264305;rank=3 chr15 . exon 446519 447078 . + . ID=Thaps264305.3;Parent=Thaps264305;constitutive=1;ensembl_end_phase=2;rank=3 chr15 ensembl protein_coding_gene 447361 447926 . + . ID=Thaps264306;biotype=protein_coding;description=Calcium-binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDF2];external_name=Thaps264306;logic_name=jgi_thaps3 chr15 ensembl transcript 447361 447926 . + . ID=Thaps264306;Parent=Thaps264306;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 447361 447926 . + 0 ID=Thaps264306;Parent=Thaps264306;rank=1 chr15 . exon 447361 447926 . + . ID=Thaps264306.1;Parent=Thaps264306;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . exon 455843 456297 . + . ID=Thaps10164.6;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=6 chr15 . exon 456713 457278 . + . ID=Thaps10164.7;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=7 chr15 . exon 457363 457424 . + . ID=Thaps10164.8;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=8 chr15 . exon 457504 458373 . + . ID=Thaps10164.9;Parent=Thaps10164;constitutive=1;rank=9 chr15 . exon 458414 460140 . + . ID=Thaps10164.10;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=10 chr15 . exon 460214 460279 . + . ID=Thaps10164.11;Parent=Thaps10164;constitutive=1;rank=11 chr15 . exon 460368 460400 . + . ID=Thaps10164.12;Parent=Thaps10164;constitutive=1;rank=12 chr15 . exon 460484 461176 . + . ID=Thaps10164.13;Parent=Thaps10164;constitutive=1;rank=13 chr15 . exon 461269 461406 . + . ID=Thaps10164.14;Parent=Thaps10164;constitutive=1;rank=14 chr15 . exon 461487 461813 . + . ID=Thaps10164.15;Parent=Thaps10164;constitutive=1;rank=15 chr15 . exon 461885 462549 . + . ID=Thaps10164.16;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=16 chr15 . exon 462624 462867 . + . ID=Thaps10164.17;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=17 chr15 . exon 462947 463156 . + . ID=Thaps10164.18;Parent=Thaps10164;constitutive=1;rank=18 chr15 . exon 463357 463498 . + . ID=Thaps10164.19;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=19 chr15 . exon 463581 464025 . + . ID=Thaps10164.20;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=20 chr15 . exon 464127 464516 . + . ID=Thaps10164.21;Parent=Thaps10164;constitutive=1;rank=21 chr15 . exon 464556 464933 . + . ID=Thaps10164.22;Parent=Thaps10164;constitutive=1;rank=22 chr15 . exon 465034 465486 . + . ID=Thaps10164.23;Parent=Thaps10164;constitutive=1;rank=23 chr15 . exon 465579 465727 . + . ID=Thaps10164.24;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=24 chr15 . repeat_region 472675 472712 . ? . description=dust chr15 ensembl protein_coding_gene 452194 478680 . + . ID=Thaps10164;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDF4];external_name=Thaps10164;logic_name=jgi_thaps3 chr15 ensembl transcript 452194 478680 . + . ID=Thaps10164;Parent=Thaps10164;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 452194 453100 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=1 chr15 . CDS 453221 453582 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=2 chr15 . CDS 453714 454542 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=3 chr15 . CDS 454677 455243 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=4 chr15 . CDS 455327 455759 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=5 chr15 . CDS 455843 456297 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=6 chr15 . CDS 456713 457278 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=7 chr15 . CDS 457363 457424 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=8 chr15 . CDS 457504 458373 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=9 chr15 . CDS 458414 460140 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=10 chr15 . CDS 460214 460279 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=11 chr15 . CDS 460368 460400 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=12 chr15 . CDS 460484 461176 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=13 chr15 . CDS 461269 461406 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=14 chr15 . CDS 461487 461813 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=15 chr15 . CDS 461885 462549 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=16 chr15 . CDS 462624 462867 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=17 chr15 . CDS 462947 463156 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=18 chr15 . CDS 463357 463498 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=19 chr15 . CDS 463581 464025 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=20 chr15 . CDS 464127 464516 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=21 chr15 . CDS 464556 464933 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=22 chr15 . CDS 465034 465486 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=23 chr15 . CDS 465579 465727 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=24 chr15 . CDS 465805 466024 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=25 chr15 . exon 465805 466024 . + . ID=Thaps10164.25;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=25 chr15 . CDS 466116 466605 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=26 chr15 . exon 466116 466605 . + . ID=Thaps10164.26;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=26 chr15 . CDS 466683 466993 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=27 chr15 . exon 466683 466993 . + . ID=Thaps10164.27;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=27 chr15 . CDS 467083 467319 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=28 chr15 . exon 467083 467319 . + . ID=Thaps10164.28;Parent=Thaps10164;constitutive=1;rank=28 chr15 . CDS 467397 467532 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=29 chr15 . exon 467397 467532 . + . ID=Thaps10164.29;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=29 chr15 . CDS 467620 467638 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=30 chr15 . exon 467620 467638 . + . ID=Thaps10164.30;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=30 chr15 . CDS 467715 467767 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=31 chr15 . exon 467715 467767 . + . ID=Thaps10164.31;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=31 chr15 . CDS 467848 468084 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=32 chr15 . exon 467848 468084 . + . ID=Thaps10164.32;Parent=Thaps10164;constitutive=1;rank=32 chr15 . CDS 468191 468685 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=33 chr15 . exon 468191 468685 . + . ID=Thaps10164.33;Parent=Thaps10164;constitutive=1;rank=33 chr15 . CDS 468754 469179 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=34 chr15 . exon 468754 469179 . + . ID=Thaps10164.34;Parent=Thaps10164;constitutive=1;rank=34 chr15 . CDS 469267 469316 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=35 chr15 . exon 469267 469316 . + . ID=Thaps10164.35;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=35 chr15 . CDS 469416 469516 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=36 chr15 . exon 469416 469516 . + . ID=Thaps10164.36;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=36 chr15 . CDS 469627 469746 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=37 chr15 . exon 469627 469746 . + . ID=Thaps10164.37;Parent=Thaps10164;constitutive=1;rank=37 chr15 . CDS 469822 469925 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=38 chr15 . exon 469822 469925 . + . ID=Thaps10164.38;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=38 chr15 . CDS 470017 470086 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=39 chr15 . exon 470017 470086 . + . ID=Thaps10164.39;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=39 chr15 . CDS 470172 470209 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=40 chr15 . exon 470172 470209 . + . ID=Thaps10164.40;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=40 chr15 . CDS 470405 470479 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=41 chr15 . exon 470405 470479 . + . ID=Thaps10164.41;Parent=Thaps10164;constitutive=1;rank=41 chr15 . CDS 470557 471282 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=42 chr15 . exon 470557 471282 . + . ID=Thaps10164.42;Parent=Thaps10164;constitutive=1;rank=42 chr15 . CDS 471361 471831 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=43 chr15 . exon 471361 471831 . + . ID=Thaps10164.43;Parent=Thaps10164;constitutive=1;rank=43 chr15 . CDS 471908 472079 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=44 chr15 . exon 471908 472079 . + . ID=Thaps10164.44;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=44 chr15 . CDS 472164 472628 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=45 chr15 . exon 472164 472628 . + . ID=Thaps10164.45;Parent=Thaps10164;constitutive=1;rank=45 chr15 . CDS 472874 473007 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=46 chr15 . exon 472874 473007 . + . ID=Thaps10164.46;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=46 chr15 . CDS 473087 473131 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=47 chr15 . exon 473087 473131 . + . ID=Thaps10164.47;Parent=Thaps10164;constitutive=1;rank=47 chr15 . CDS 473219 473309 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=48 chr15 . exon 473219 473309 . + . ID=Thaps10164.48;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=48 chr15 . CDS 473385 473415 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=49 chr15 . exon 473385 473415 . + . ID=Thaps10164.49;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=49 chr15 . CDS 473513 473950 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=50 chr15 . exon 473513 473950 . + . ID=Thaps10164.50;Parent=Thaps10164;constitutive=1;rank=50 chr15 . CDS 474101 475351 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=51 chr15 . exon 474101 475351 . + . ID=Thaps10164.51;Parent=Thaps10164;constitutive=1;rank=51 chr15 . CDS 475436 476138 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=52 chr15 . exon 475436 476138 . + . ID=Thaps10164.52;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=52 chr15 . CDS 476183 476381 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=53 chr15 . CDS 476415 476624 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=54 chr15 . CDS 476705 477489 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=55 chr15 . CDS 477572 477656 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=56 chr15 . CDS 477846 478096 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=57 chr15 . CDS 478203 478568 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=58 chr15 . CDS 478649 478680 . + 0 ID=Thaps10164;Parent=Thaps10164;rank=59 chr15 . repeat_region 480765 480798 . ? . description=trf chr15 . repeat_region 484767 485327 . ? . description=trf chr15 . exon 476183 476381 . + . ID=Thaps10164.53;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=53 chr15 . exon 476415 476624 . + . ID=Thaps10164.54;Parent=Thaps10164;constitutive=1;rank=54 chr15 . exon 476705 477489 . + . ID=Thaps10164.55;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=55 chr15 . exon 477572 477656 . + . ID=Thaps10164.56;Parent=Thaps10164;constitutive=1;ensembl_end_phase=1;rank=56 chr15 . exon 477846 478096 . + . ID=Thaps10164.57;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=57 chr15 . exon 478203 478568 . + . ID=Thaps10164.58;Parent=Thaps10164;constitutive=1;rank=58 chr15 . exon 478649 478680 . + . ID=Thaps10164.59;Parent=Thaps10164;constitutive=1;ensembl_end_phase=2;rank=59 chr15 ensembl protein_coding_gene 481251 483869 . + . ID=Thaps42515;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8CDF5];external_name=Thaps42515;logic_name=jgi_thaps3 chr15 ensembl transcript 481251 483869 . + . ID=Thaps42515;Parent=Thaps42515;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 481251 481500 . + 0 ID=Thaps42515;Parent=Thaps42515;rank=1 chr15 . exon 481251 481500 . + . ID=Thaps42515.1;Parent=Thaps42515;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 481640 481791 . + 0 ID=Thaps42515;Parent=Thaps42515;rank=2 chr15 . exon 481640 481791 . + . ID=Thaps42515.2;Parent=Thaps42515;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 482768 483482 . + 0 ID=Thaps42515;Parent=Thaps42515;rank=3 chr15 . exon 482768 483482 . + . ID=Thaps42515.3;Parent=Thaps42515;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 483571 483869 . + 0 ID=Thaps42515;Parent=Thaps42515;rank=4 chr15 . exon 483571 483869 . + . ID=Thaps42515.4;Parent=Thaps42515;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . repeat_region 494376 494420 . ? . description=dust chr15 ensembl protein_coding_gene 494540 495976 . - . ID=Thaps25011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDF8];external_name=Thaps25011;logic_name=jgi_thaps3 chr15 ensembl transcript 494540 495976 . - . ID=Thaps25011;Parent=Thaps25011;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 494540 495976 . - 0 ID=Thaps25011;Parent=Thaps25011;rank=1 chr15 . exon 494540 495976 . - . ID=Thaps25011.1;Parent=Thaps25011;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 488018 489305 . + . ID=Thaps37571;biotype=protein_coding;description=Pyruvate dehydrogenase kinase [Source:UniProtKB/TrEMBL%3BAcc:B8CDF6];external_name=Thaps37571;logic_name=jgi_thaps3 chr15 ensembl transcript 488018 489305 . + . ID=Thaps37571;Parent=Thaps37571;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 488018 488321 . + 0 ID=Thaps37571;Parent=Thaps37571;rank=1 chr15 . exon 488018 488321 . + . ID=Thaps37571.1;Parent=Thaps37571;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 488415 488676 . + 0 ID=Thaps37571;Parent=Thaps37571;rank=2 chr15 . exon 488415 488676 . + . ID=Thaps37571.2;Parent=Thaps37571;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 488774 488990 . + 0 ID=Thaps37571;Parent=Thaps37571;rank=3 chr15 . exon 488774 488990 . + . ID=Thaps37571.3;Parent=Thaps37571;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 489072 489305 . + 0 ID=Thaps37571;Parent=Thaps37571;rank=4 chr15 . exon 489072 489305 . + . ID=Thaps37571.4;Parent=Thaps37571;constitutive=1;rank=4 chr15 ensembl protein_coding_gene 490373 493142 . - . ID=Thaps37638;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDF7];external_name=Thaps37638;logic_name=jgi_thaps3 chr15 ensembl transcript 490373 493142 . - . ID=Thaps37638;Parent=Thaps37638;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 490373 490473 . - 0 ID=Thaps37638;Parent=Thaps37638;rank=9 chr15 . exon 490373 490473 . - . ID=Thaps37638.9;Parent=Thaps37638;constitutive=1;ensembl_end_phase=2;rank=9 chr15 . CDS 490557 490692 . - 0 ID=Thaps37638;Parent=Thaps37638;rank=8 chr15 . exon 490557 490692 . - . ID=Thaps37638.8;Parent=Thaps37638;constitutive=1;ensembl_end_phase=1;rank=8 chr15 . CDS 490872 491028 . - 0 ID=Thaps37638;Parent=Thaps37638;rank=7 chr15 . exon 490872 491028 . - . ID=Thaps37638.7;Parent=Thaps37638;constitutive=1;ensembl_end_phase=1;rank=7 chr15 . CDS 491107 491257 . - 0 ID=Thaps37638;Parent=Thaps37638;rank=6 chr15 . exon 491107 491257 . - . ID=Thaps37638.6;Parent=Thaps37638;constitutive=1;ensembl_end_phase=1;rank=6 chr15 . CDS 491333 491512 . - 0 ID=Thaps37638;Parent=Thaps37638;rank=5 chr15 . exon 491333 491512 . - . ID=Thaps37638.5;Parent=Thaps37638;constitutive=1;rank=5 chr15 . CDS 491593 491627 . - 0 ID=Thaps37638;Parent=Thaps37638;rank=4 chr15 . exon 491593 491627 . - . ID=Thaps37638.4;Parent=Thaps37638;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 492009 492321 . - 0 ID=Thaps37638;Parent=Thaps37638;rank=3 chr15 . exon 492009 492321 . - . ID=Thaps37638.3;Parent=Thaps37638;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 492433 492875 . - 0 ID=Thaps37638;Parent=Thaps37638;rank=2 chr15 . exon 492433 492875 . - . ID=Thaps37638.2;Parent=Thaps37638;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 492955 493142 . - 0 ID=Thaps37638;Parent=Thaps37638;rank=1 chr15 . exon 492955 493142 . - . ID=Thaps37638.1;Parent=Thaps37638;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . repeat_region 504779 504821 . ? . description=trf chr15 ensembl tRNA_gene 499130 499202 . - . ID=EPrTPOG00000000025;biotype=tRNA;description=tRNA-Phe for anticodon GAA [Source:TRNASCAN_SE%3BAcc:tRNA-Phe];external_name=tRNA-Phe;logic_name=ncrna_eg chr15 ensembl transcript 499130 499202 . - . ID=EPrTPOT00000000018;Parent=EPrTPOG00000000025;biotype=tRNA;logic_name=ncrna_eg chr15 . exon 499130 499202 . - . ID=EPrTPOE00000000025;Parent=EPrTPOT00000000018;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 496469 497044 . - . ID=Thaps10169;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDF9];external_name=Thaps10169;logic_name=jgi_thaps3 chr15 ensembl transcript 496469 497044 . - . ID=Thaps10169;Parent=Thaps10169;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 496469 497044 . - 0 ID=Thaps10169;Parent=Thaps10169;rank=1 chr15 . exon 496469 497044 . - . ID=Thaps10169.1;Parent=Thaps10169;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 503871 512504 . - . ID=Thaps10172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDG2];external_name=Thaps10172;logic_name=jgi_thaps3 chr15 ensembl transcript 503871 512504 . - . ID=Thaps10172;Parent=Thaps10172;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 503871 503888 . - 0 ID=Thaps10172;Parent=Thaps10172;rank=7 chr15 . exon 503871 503888 . - . ID=Thaps10172.7;Parent=Thaps10172;constitutive=1;rank=7 chr15 . CDS 503948 506242 . - 0 ID=Thaps10172;Parent=Thaps10172;rank=6 chr15 . exon 503948 506242 . - . ID=Thaps10172.6;Parent=Thaps10172;constitutive=1;rank=6 chr15 . CDS 506445 506737 . - 0 ID=Thaps10172;Parent=Thaps10172;rank=5 chr15 . CDS 506825 509407 . - 0 ID=Thaps10172;Parent=Thaps10172;rank=4 chr15 . CDS 509499 509793 . - 0 ID=Thaps10172;Parent=Thaps10172;rank=3 chr15 . CDS 509873 512003 . - 0 ID=Thaps10172;Parent=Thaps10172;rank=2 chr15 . CDS 512392 512504 . - 0 ID=Thaps10172;Parent=Thaps10172;rank=1 chr15 ensembl protein_coding_gene 497659 498222 . - . ID=Thaps25012;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDG0];external_name=Thaps25012;logic_name=jgi_thaps3 chr15 ensembl transcript 497659 498222 . - . ID=Thaps25012;Parent=Thaps25012;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 497659 498222 . - 0 ID=Thaps25012;Parent=Thaps25012;rank=1 chr15 . exon 497659 498222 . - . ID=Thaps25012.1;Parent=Thaps25012;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 502681 503430 . + . ID=Thaps37617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDG1];external_name=Thaps37617;logic_name=jgi_thaps3 chr15 ensembl transcript 502681 503430 . + . ID=Thaps37617;Parent=Thaps37617;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 502681 503430 . + 0 ID=Thaps37617;Parent=Thaps37617;rank=1 chr15 . exon 502681 503430 . + . ID=Thaps37617.1;Parent=Thaps37617;constitutive=1;rank=1 chr15 . exon 506445 506737 . - . ID=Thaps10172.5;Parent=Thaps10172;constitutive=1;ensembl_end_phase=2;rank=5 chr15 . exon 506825 509407 . - . ID=Thaps10172.4;Parent=Thaps10172;constitutive=1;rank=4 chr15 . exon 509499 509793 . - . ID=Thaps10172.3;Parent=Thaps10172;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . exon 509873 512003 . - . ID=Thaps10172.2;Parent=Thaps10172;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . exon 512392 512504 . - . ID=Thaps10172.1;Parent=Thaps10172;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 513427 514727 . + . ID=Thaps10173;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDG3];external_name=Thaps10173;logic_name=jgi_thaps3 chr15 ensembl transcript 513427 514727 . + . ID=Thaps10173;Parent=Thaps10173;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 513427 513921 . + 0 ID=Thaps10173;Parent=Thaps10173;rank=1 chr15 . exon 513427 513921 . + . ID=Thaps10173.1;Parent=Thaps10173;constitutive=1;rank=1 chr15 . CDS 514017 514727 . + 0 ID=Thaps10173;Parent=Thaps10173;rank=2 chr15 . exon 514017 514727 . + . ID=Thaps10173.2;Parent=Thaps10173;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 518513 521562 . - . ID=Thaps25014;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDG5];external_name=Thaps25014;logic_name=jgi_thaps3 chr15 ensembl transcript 518513 521562 . - . ID=Thaps25014;Parent=Thaps25014;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 518513 518607 . - 0 ID=Thaps25014;Parent=Thaps25014;rank=4 chr15 . exon 518513 518607 . - . ID=Thaps25014.4;Parent=Thaps25014;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 519146 519255 . - 0 ID=Thaps25014;Parent=Thaps25014;rank=3 chr15 . exon 519146 519255 . - . ID=Thaps25014.3;Parent=Thaps25014;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 519345 519625 . - 0 ID=Thaps25014;Parent=Thaps25014;rank=2 chr15 . exon 519345 519625 . - . ID=Thaps25014.2;Parent=Thaps25014;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 519982 521562 . - 0 ID=Thaps25014;Parent=Thaps25014;rank=1 chr15 . exon 519982 521562 . - . ID=Thaps25014.1;Parent=Thaps25014;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 522558 525458 . + . ID=Thaps25015;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDG6];external_name=Thaps25015;logic_name=jgi_thaps3 chr15 ensembl transcript 522558 525458 . + . ID=Thaps25015;Parent=Thaps25015;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 522558 524009 . + 0 ID=Thaps25015;Parent=Thaps25015;rank=1 chr15 . exon 522558 524009 . + . ID=Thaps25015.1;Parent=Thaps25015;constitutive=1;rank=1 chr15 . CDS 524108 524498 . + 0 ID=Thaps25015;Parent=Thaps25015;rank=2 chr15 . exon 524108 524498 . + . ID=Thaps25015.2;Parent=Thaps25015;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 524761 525458 . + 0 ID=Thaps25015;Parent=Thaps25015;rank=3 chr15 . exon 524761 525458 . + . ID=Thaps25015.3;Parent=Thaps25015;constitutive=1;ensembl_end_phase=2;rank=3 chr15 ensembl gene 516315 517122 . - . ID=Thaps264312;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr15 ensembl transcript 516315 517122 . - . ID=Thaps264312;Parent=Thaps264312;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr15 . exon 516315 516877 . - . ID=Thaps264312.2;Parent=Thaps264312;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . exon 516956 517122 . - . ID=Thaps264312.1;Parent=Thaps264312;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 515345 515971 . - . ID=Thaps37727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDG4];external_name=Thaps37727;logic_name=jgi_thaps3 chr15 ensembl transcript 515345 515971 . - . ID=Thaps37727;Parent=Thaps37727;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 515345 515971 . - 0 ID=Thaps37727;Parent=Thaps37727;rank=1 chr15 . exon 515345 515971 . - . ID=Thaps37727.1;Parent=Thaps37727;constitutive=1;rank=1 chr15 . repeat_region 528802 528857 . ? . description=dust chr15 . repeat_region 530706 530736 . ? . description=trf chr15 . repeat_region 534322 534352 . ? . description=trf chr15 ensembl protein_coding_gene 528911 529999 . - . ID=Thaps10178;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDG8];external_name=Thaps10178;logic_name=jgi_thaps3 chr15 ensembl transcript 528911 529999 . - . ID=Thaps10178;Parent=Thaps10178;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 528911 529054 . - 0 ID=Thaps10178;Parent=Thaps10178;rank=2 chr15 . exon 528911 529054 . - . ID=Thaps10178.2;Parent=Thaps10178;constitutive=1;rank=2 chr15 . CDS 529150 529999 . - 0 ID=Thaps10178;Parent=Thaps10178;rank=1 chr15 . exon 529150 529999 . - . ID=Thaps10178.1;Parent=Thaps10178;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 534031 534609 . - . ID=Thaps10180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDH0];external_name=Thaps10180;logic_name=jgi_thaps3 chr15 ensembl transcript 534031 534609 . - . ID=Thaps10180;Parent=Thaps10180;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 534031 534609 . - 0 ID=Thaps10180;Parent=Thaps10180;rank=1 chr15 . exon 534031 534609 . - . ID=Thaps10180.1;Parent=Thaps10180;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 525880 528675 . + . ID=Thaps25016;biotype=protein_coding;description=Probable betaine aldehyde dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8CDG7];external_name=Thaps25016;logic_name=jgi_thaps3 chr15 ensembl transcript 525880 528675 . + . ID=Thaps25016;Parent=Thaps25016;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 525880 526121 . + 0 ID=Thaps25016;Parent=Thaps25016;rank=1 chr15 . exon 525880 526121 . + . ID=Thaps25016.1;Parent=Thaps25016;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 526210 526450 . + 0 ID=Thaps25016;Parent=Thaps25016;rank=2 chr15 . exon 526210 526450 . + . ID=Thaps25016.2;Parent=Thaps25016;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 526535 527525 . + 0 ID=Thaps25016;Parent=Thaps25016;rank=3 chr15 . exon 526535 527525 . + . ID=Thaps25016.3;Parent=Thaps25016;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 528644 528675 . + 0 ID=Thaps25016;Parent=Thaps25016;rank=4 chr15 . exon 528644 528675 . + . ID=Thaps25016.4;Parent=Thaps25016;constitutive=1;ensembl_end_phase=2;rank=4 chr15 ensembl protein_coding_gene 530409 532742 . + . ID=Thaps25017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDG9];external_name=Thaps25017;logic_name=jgi_thaps3 chr15 ensembl transcript 530409 532742 . + . ID=Thaps25017;Parent=Thaps25017;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 530409 530802 . + 0 ID=Thaps25017;Parent=Thaps25017;rank=1 chr15 . exon 530409 530802 . + . ID=Thaps25017.1;Parent=Thaps25017;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 530873 531028 . + 0 ID=Thaps25017;Parent=Thaps25017;rank=2 chr15 . exon 530873 531028 . + . ID=Thaps25017.2;Parent=Thaps25017;constitutive=1;rank=2 chr15 . CDS 531115 532742 . + 0 ID=Thaps25017;Parent=Thaps25017;rank=3 chr15 . exon 531115 532742 . + . ID=Thaps25017.3;Parent=Thaps25017;constitutive=1;ensembl_end_phase=2;rank=3 chr15 ensembl protein_coding_gene 535052 535543 . + . ID=Thaps10181;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDH1];external_name=Thaps10181;logic_name=jgi_thaps3 chr15 ensembl transcript 535052 535543 . + . ID=Thaps10181;Parent=Thaps10181;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 535052 535543 . + 0 ID=Thaps10181;Parent=Thaps10181;rank=1 chr15 . exon 535052 535543 . + . ID=Thaps10181.1;Parent=Thaps10181;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 539624 540346 . + . ID=Thaps10183;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDH3];external_name=Thaps10183;logic_name=jgi_thaps3 chr15 ensembl transcript 539624 540346 . + . ID=Thaps10183;Parent=Thaps10183;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 539624 540346 . + 0 ID=Thaps10183;Parent=Thaps10183;rank=1 chr15 . exon 539624 540346 . + . ID=Thaps10183.1;Parent=Thaps10183;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 542958 544066 . + . ID=Thaps10185;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDH5];external_name=Thaps10185;logic_name=jgi_thaps3 chr15 ensembl transcript 542958 544066 . + . ID=Thaps10185;Parent=Thaps10185;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 542958 543517 . + 0 ID=Thaps10185;Parent=Thaps10185;rank=1 chr15 . exon 542958 543517 . + . ID=Thaps10185.1;Parent=Thaps10185;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 543589 544066 . + 0 ID=Thaps10185;Parent=Thaps10185;rank=2 chr15 . exon 543589 544066 . + . ID=Thaps10185.2;Parent=Thaps10185;constitutive=1;ensembl_end_phase=1;rank=2 chr15 ensembl protein_coding_gene 544652 545920 . - . ID=Thaps25019;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDH6];external_name=Thaps25019;logic_name=jgi_thaps3 chr15 ensembl transcript 544652 545920 . - . ID=Thaps25019;Parent=Thaps25019;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 544652 545920 . - 0 ID=Thaps25019;Parent=Thaps25019;rank=1 chr15 . exon 544652 545920 . - . ID=Thaps25019.1;Parent=Thaps25019;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 536120 538172 . - . ID=Thaps264314;biotype=protein_coding;description=Monogalactosyldiacylglycerol synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CDH2];external_name=Thaps264314;logic_name=jgi_thaps3 chr15 ensembl transcript 536120 538172 . - . ID=Thaps264314;Parent=Thaps264314;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 536120 536476 . - 0 ID=Thaps264314;Parent=Thaps264314;rank=4 chr15 . exon 536120 536476 . - . ID=Thaps264314.4;Parent=Thaps264314;constitutive=1;rank=4 chr15 . CDS 536567 536610 . - 0 ID=Thaps264314;Parent=Thaps264314;rank=3 chr15 . exon 536567 536610 . - . ID=Thaps264314.3;Parent=Thaps264314;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 537284 537507 . - 0 ID=Thaps264314;Parent=Thaps264314;rank=2 chr15 . exon 537284 537507 . - . ID=Thaps264314.2;Parent=Thaps264314;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 537553 538172 . - 0 ID=Thaps264314;Parent=Thaps264314;rank=1 chr15 . exon 537553 538172 . - . ID=Thaps264314.1;Parent=Thaps264314;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 540997 542619 . - . ID=Thaps264316;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDH4];external_name=Thaps264316;logic_name=jgi_thaps3 chr15 ensembl transcript 540997 542619 . - . ID=Thaps264316;Parent=Thaps264316;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 540997 541626 . - 0 ID=Thaps264316;Parent=Thaps264316;rank=5 chr15 . exon 540997 541626 . - . ID=Thaps264316.5;Parent=Thaps264316;constitutive=1;rank=5 chr15 . CDS 541731 541830 . - 0 ID=Thaps264316;Parent=Thaps264316;rank=4 chr15 . exon 541731 541830 . - . ID=Thaps264316.4;Parent=Thaps264316;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 542029 542169 . - 0 ID=Thaps264316;Parent=Thaps264316;rank=3 chr15 . exon 542029 542169 . - . ID=Thaps264316.3;Parent=Thaps264316;constitutive=1;rank=3 chr15 . CDS 542333 542463 . - 0 ID=Thaps264316;Parent=Thaps264316;rank=2 chr15 . exon 542333 542463 . - . ID=Thaps264316.2;Parent=Thaps264316;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 542509 542619 . - 0 ID=Thaps264316;Parent=Thaps264316;rank=1 chr15 . exon 542509 542619 . - . ID=Thaps264316.1;Parent=Thaps264316;constitutive=1;rank=1 chr15 . repeat_region 546224 546231 . ? . description=dust chr15 . repeat_region 552380 552415 . ? . description=trf chr15 ensembl protein_coding_gene 554139 556303 . + . ID=Thaps10189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDH9];external_name=Thaps10189;logic_name=jgi_thaps3 chr15 ensembl transcript 554139 556303 . + . ID=Thaps10189;Parent=Thaps10189;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 554139 555842 . + 0 ID=Thaps10189;Parent=Thaps10189;rank=1 chr15 . exon 554139 555842 . + . ID=Thaps10189.1;Parent=Thaps10189;constitutive=1;rank=1 chr15 . CDS 555929 556303 . + 0 ID=Thaps10189;Parent=Thaps10189;rank=2 chr15 ensembl protein_coding_gene 546973 550334 . - . ID=Thaps264317;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDH7];external_name=Thaps264317;logic_name=jgi_thaps3 chr15 ensembl transcript 546973 550334 . - . ID=Thaps264317;Parent=Thaps264317;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 546973 547058 . - 0 ID=Thaps264317;Parent=Thaps264317;rank=5 chr15 . exon 546973 547058 . - . ID=Thaps264317.5;Parent=Thaps264317;constitutive=1;ensembl_end_phase=2;rank=5 chr15 . CDS 548342 548673 . - 0 ID=Thaps264317;Parent=Thaps264317;rank=4 chr15 . exon 548342 548673 . - . ID=Thaps264317.4;Parent=Thaps264317;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 548767 549636 . - 0 ID=Thaps264317;Parent=Thaps264317;rank=3 chr15 . exon 548767 549636 . - . ID=Thaps264317.3;Parent=Thaps264317;constitutive=1;rank=3 chr15 . CDS 549715 550223 . - 0 ID=Thaps264317;Parent=Thaps264317;rank=2 chr15 . exon 549715 550223 . - . ID=Thaps264317.2;Parent=Thaps264317;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 550305 550334 . - 0 ID=Thaps264317;Parent=Thaps264317;rank=1 chr15 . exon 550305 550334 . - . ID=Thaps264317.1;Parent=Thaps264317;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 552581 553123 . - . ID=Thaps264318;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDH8];external_name=Thaps264318;logic_name=jgi_thaps3 chr15 ensembl transcript 552581 553123 . - . ID=Thaps264318;Parent=Thaps264318;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 552581 552730 . - 0 ID=Thaps264318;Parent=Thaps264318;rank=2 chr15 . exon 552581 552730 . - . ID=Thaps264318.2;Parent=Thaps264318;constitutive=1;rank=2 chr15 . CDS 552755 553123 . - 0 ID=Thaps264318;Parent=Thaps264318;rank=1 chr15 . exon 552755 553123 . - . ID=Thaps264318.1;Parent=Thaps264318;constitutive=1;rank=1 chr15 . exon 555929 556303 . + . ID=Thaps10189.2;Parent=Thaps10189;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 559150 562601 . - . ID=Thaps10191;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI1];external_name=Thaps10191;logic_name=jgi_thaps3 chr15 ensembl transcript 559150 562601 . - . ID=Thaps10191;Parent=Thaps10191;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 559150 561563 . - 0 ID=Thaps10191;Parent=Thaps10191;rank=3 chr15 . exon 559150 561563 . - . ID=Thaps10191.3;Parent=Thaps10191;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 561710 562301 . - 0 ID=Thaps10191;Parent=Thaps10191;rank=2 chr15 . exon 561710 562301 . - . ID=Thaps10191.2;Parent=Thaps10191;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 562341 562601 . - 0 ID=Thaps10191;Parent=Thaps10191;rank=1 chr15 . exon 562341 562601 . - . ID=Thaps10191.1;Parent=Thaps10191;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 563503 564774 . + . ID=Thaps10192;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI2];external_name=Thaps10192;logic_name=jgi_thaps3 chr15 ensembl transcript 563503 564774 . + . ID=Thaps10192;Parent=Thaps10192;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 563503 564774 . + 0 ID=Thaps10192;Parent=Thaps10192;rank=1 chr15 . exon 563503 564774 . + . ID=Thaps10192.1;Parent=Thaps10192;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 556832 558719 . - . ID=Thaps25022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI0];external_name=Thaps25022;logic_name=jgi_thaps3 chr15 ensembl transcript 556832 558719 . - . ID=Thaps25022;Parent=Thaps25022;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 556832 557846 . - 0 ID=Thaps25022;Parent=Thaps25022;rank=3 chr15 . exon 556832 557846 . - . ID=Thaps25022.3;Parent=Thaps25022;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 557945 558061 . - 0 ID=Thaps25022;Parent=Thaps25022;rank=2 chr15 . exon 557945 558061 . - . ID=Thaps25022.2;Parent=Thaps25022;constitutive=1;rank=2 chr15 . CDS 558148 558719 . - 0 ID=Thaps25022;Parent=Thaps25022;rank=1 chr15 . exon 558148 558719 . - . ID=Thaps25022.1;Parent=Thaps25022;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . repeat_region 567094 567134 . ? . description=trf chr15 . biological_region 568468 568468 0.999 + . logic_name=eponine chr15 . repeat_region 569033 569107 . ? . description=trf chr15 . repeat_region 569153 569234 . - . description=Copia8I_TP chr15 . repeat_region 569447 569521 . ? . description=trf chr15 . repeat_region 570922 570942 . ? . description=dust chr15 . repeat_region 571289 571296 . ? . description=dust chr15 ensembl protein_coding_gene 572603 573610 . + . ID=Thaps10194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI4];external_name=Thaps10194;logic_name=jgi_thaps3 chr15 ensembl transcript 572603 573610 . + . ID=Thaps10194;Parent=Thaps10194;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 572603 573610 . + 0 ID=Thaps10194;Parent=Thaps10194;rank=1 chr15 . exon 572603 573610 . + . ID=Thaps10194.1;Parent=Thaps10194;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 573766 574683 . - . ID=Thaps10195;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI5];external_name=Thaps10195;logic_name=jgi_thaps3 chr15 ensembl transcript 573766 574683 . - . ID=Thaps10195;Parent=Thaps10195;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 573766 574683 . - 0 ID=Thaps10195;Parent=Thaps10195;rank=1 chr15 . exon 573766 574683 . - . ID=Thaps10195.1;Parent=Thaps10195;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 564843 569345 . - . ID=Thaps25023;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI3];external_name=Thaps25023;logic_name=jgi_thaps3 chr15 ensembl transcript 564843 569345 . - . ID=Thaps25023;Parent=Thaps25023;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 564843 566886 . - 0 ID=Thaps25023;Parent=Thaps25023;rank=5 chr15 . exon 564843 566886 . - . ID=Thaps25023.5;Parent=Thaps25023;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 566962 568046 . - 0 ID=Thaps25023;Parent=Thaps25023;rank=4 chr15 . exon 566962 568046 . - . ID=Thaps25023.4;Parent=Thaps25023;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 568132 568828 . - 0 ID=Thaps25023;Parent=Thaps25023;rank=3 chr15 . exon 568132 568828 . - . ID=Thaps25023.3;Parent=Thaps25023;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 568936 568997 . - 0 ID=Thaps25023;Parent=Thaps25023;rank=2 chr15 . exon 568936 568997 . - . ID=Thaps25023.2;Parent=Thaps25023;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 569238 569345 . - 0 ID=Thaps25023;Parent=Thaps25023;rank=1 chr15 . exon 569238 569345 . - . ID=Thaps25023.1;Parent=Thaps25023;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 578779 580387 . + . ID=Thaps10198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI8];external_name=Thaps10198;logic_name=jgi_thaps3 chr15 ensembl transcript 578779 580387 . + . ID=Thaps10198;Parent=Thaps10198;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 578779 579565 . + 0 ID=Thaps10198;Parent=Thaps10198;rank=1 chr15 . exon 578779 579565 . + . ID=Thaps10198.1;Parent=Thaps10198;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 579605 579935 . + 0 ID=Thaps10198;Parent=Thaps10198;rank=2 chr15 . exon 579605 579935 . + . ID=Thaps10198.2;Parent=Thaps10198;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 580081 580387 . + 0 ID=Thaps10198;Parent=Thaps10198;rank=3 chr15 . exon 580081 580387 . + . ID=Thaps10198.3;Parent=Thaps10198;constitutive=1;ensembl_end_phase=1;rank=3 chr15 ensembl protein_coding_gene 575985 576821 . + . ID=Thaps25024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI6];external_name=Thaps25024;logic_name=jgi_thaps3 chr15 ensembl transcript 575985 576821 . + . ID=Thaps25024;Parent=Thaps25024;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 575985 576821 . + 0 ID=Thaps25024;Parent=Thaps25024;rank=1 chr15 . exon 575985 576821 . + . ID=Thaps25024.1;Parent=Thaps25024;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 577245 578057 . - . ID=Thaps25025;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI7];external_name=Thaps25025;logic_name=jgi_thaps3 chr15 ensembl transcript 577245 578057 . - . ID=Thaps25025;Parent=Thaps25025;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 577245 578057 . - 0 ID=Thaps25025;Parent=Thaps25025;rank=1 chr15 . exon 577245 578057 . - . ID=Thaps25025.1;Parent=Thaps25025;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 581198 581887 . - . ID=Thaps25026;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDI9];external_name=Thaps25026;logic_name=jgi_thaps3 chr15 ensembl transcript 581198 581887 . - . ID=Thaps25026;Parent=Thaps25026;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 581198 581887 . - 0 ID=Thaps25026;Parent=Thaps25026;rank=1 chr15 . exon 581198 581887 . - . ID=Thaps25026.1;Parent=Thaps25026;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 582411 584249 . - . ID=Thaps25027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ0];external_name=Thaps25027;logic_name=jgi_thaps3 chr15 ensembl transcript 582411 584249 . - . ID=Thaps25027;Parent=Thaps25027;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 582411 583598 . - 0 ID=Thaps25027;Parent=Thaps25027;rank=3 chr15 . exon 582411 583598 . - . ID=Thaps25027.3;Parent=Thaps25027;constitutive=1;rank=3 chr15 . CDS 583726 583848 . - 0 ID=Thaps25027;Parent=Thaps25027;rank=2 chr15 . exon 583726 583848 . - . ID=Thaps25027.2;Parent=Thaps25027;constitutive=1;rank=2 chr15 . CDS 583965 584249 . - 0 ID=Thaps25027;Parent=Thaps25027;rank=1 chr15 . exon 583965 584249 . - . ID=Thaps25027.1;Parent=Thaps25027;constitutive=1;rank=1 chr15 . repeat_region 592891 592906 . ? . description=dust chr15 ensembl protein_coding_gene 585606 586265 . - . ID=Thaps10201;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ1];external_name=Thaps10201;logic_name=jgi_thaps3 chr15 ensembl transcript 585606 586265 . - . ID=Thaps10201;Parent=Thaps10201;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 585606 586265 . - 0 ID=Thaps10201;Parent=Thaps10201;rank=1 chr15 . exon 585606 586265 . - . ID=Thaps10201.1;Parent=Thaps10201;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 592575 594797 . + . ID=Thaps10203;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ3];external_name=Thaps10203;logic_name=jgi_thaps3 chr15 ensembl transcript 592575 594797 . + . ID=Thaps10203;Parent=Thaps10203;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 592575 594797 . + 0 ID=Thaps10203;Parent=Thaps10203;rank=1 chr15 . exon 592575 594797 . + . ID=Thaps10203.1;Parent=Thaps10203;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 588581 589489 . - . ID=Thaps30149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ2];external_name=Thaps30149;logic_name=jgi_thaps3 chr15 ensembl transcript 588581 589489 . - . ID=Thaps30149;Parent=Thaps30149;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 588581 588652 . - 0 ID=Thaps30149;Parent=Thaps30149;rank=2 chr15 . exon 588581 588652 . - . ID=Thaps30149.2;Parent=Thaps30149;constitutive=1;rank=2 chr15 . CDS 588752 589489 . - 0 ID=Thaps30149;Parent=Thaps30149;rank=1 chr15 . exon 588752 589489 . - . ID=Thaps30149.1;Parent=Thaps30149;constitutive=1;rank=1 chr15 . repeat_region 603679 603762 . ? . description=trf chr15 ensembl protein_coding_gene 603434 606277 . + . ID=Thaps10207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ7];external_name=Thaps10207;logic_name=jgi_thaps3 chr15 ensembl transcript 603434 606277 . + . ID=Thaps10207;Parent=Thaps10207;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 603434 606277 . + 0 ID=Thaps10207;Parent=Thaps10207;rank=1 chr15 . exon 603434 606277 . + . ID=Thaps10207.1;Parent=Thaps10207;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 595115 598238 . - . ID=Thaps25028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ4];external_name=Thaps25028;logic_name=jgi_thaps3 chr15 ensembl transcript 595115 598238 . - . ID=Thaps25028;Parent=Thaps25028;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 595115 595481 . - 0 ID=Thaps25028;Parent=Thaps25028;rank=4 chr15 . exon 595115 595481 . - . ID=Thaps25028.4;Parent=Thaps25028;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 595546 595715 . - 0 ID=Thaps25028;Parent=Thaps25028;rank=3 chr15 . exon 595546 595715 . - . ID=Thaps25028.3;Parent=Thaps25028;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 596080 596111 . - 0 ID=Thaps25028;Parent=Thaps25028;rank=2 chr15 . exon 596080 596111 . - . ID=Thaps25028.2;Parent=Thaps25028;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 596162 598238 . - 0 ID=Thaps25028;Parent=Thaps25028;rank=1 chr15 . exon 596162 598238 . - . ID=Thaps25028.1;Parent=Thaps25028;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 600817 603120 . - . ID=Thaps25030;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ6];external_name=Thaps25030;logic_name=jgi_thaps3 chr15 ensembl transcript 600817 603120 . - . ID=Thaps25030;Parent=Thaps25030;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 600817 603120 . - 0 ID=Thaps25030;Parent=Thaps25030;rank=1 chr15 . exon 600817 603120 . - . ID=Thaps25030.1;Parent=Thaps25030;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 598808 599875 . + . ID=Thaps42533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ5];external_name=Thaps42533;logic_name=jgi_thaps3 chr15 ensembl transcript 598808 599875 . + . ID=Thaps42533;Parent=Thaps42533;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 598808 599600 . + 0 ID=Thaps42533;Parent=Thaps42533;rank=1 chr15 . exon 598808 599600 . + . ID=Thaps42533.1;Parent=Thaps42533;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 599691 599875 . + 0 ID=Thaps42533;Parent=Thaps42533;rank=2 chr15 . exon 599691 599875 . + . ID=Thaps42533.2;Parent=Thaps42533;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . repeat_region 609527 609716 . + . description=Gypsy3LTR_TP chr15 ensembl protein_coding_gene 607214 609283 . - . ID=Thaps25031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ8];external_name=Thaps25031;logic_name=jgi_thaps3 chr15 ensembl transcript 607214 609283 . - . ID=Thaps25031;Parent=Thaps25031;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 607214 609283 . - 0 ID=Thaps25031;Parent=Thaps25031;rank=1 chr15 . exon 607214 609283 . - . ID=Thaps25031.1;Parent=Thaps25031;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 611597 612482 . - . ID=Thaps25033;biotype=protein_coding;description=Methionyl-trn synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CDK0];external_name=Thaps25033;logic_name=jgi_thaps3 chr15 ensembl transcript 611597 612482 . - . ID=Thaps25033;Parent=Thaps25033;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 611597 611805 . - 0 ID=Thaps25033;Parent=Thaps25033;rank=3 chr15 . exon 611597 611805 . - . ID=Thaps25033.3;Parent=Thaps25033;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 611898 612003 . - 0 ID=Thaps25033;Parent=Thaps25033;rank=2 chr15 . exon 611898 612003 . - . ID=Thaps25033.2;Parent=Thaps25033;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 612102 612482 . - 0 ID=Thaps25033;Parent=Thaps25033;rank=1 chr15 . exon 612102 612482 . - . ID=Thaps25033.1;Parent=Thaps25033;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 612962 614320 . + . ID=Thaps25034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDK1];external_name=Thaps25034;logic_name=jgi_thaps3 chr15 ensembl transcript 612962 614320 . + . ID=Thaps25034;Parent=Thaps25034;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 612962 614320 . + 0 ID=Thaps25034;Parent=Thaps25034;rank=1 chr15 . exon 612962 614320 . + . ID=Thaps25034.1;Parent=Thaps25034;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 610915 611352 . + . ID=Thaps30154;biotype=protein_coding;description=60S subunit ribosomal protein L27 [Source:UniProtKB/TrEMBL%3BAcc:B8CDJ9];external_name=RPL27;logic_name=jgi_thaps3 chr15 ensembl transcript 610915 611352 . + . ID=Thaps30154;Parent=Thaps30154;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 610915 611352 . + 0 ID=Thaps30154;Parent=Thaps30154;rank=1 chr15 . exon 610915 611352 . + . ID=Thaps30154.1;Parent=Thaps30154;constitutive=1;rank=1 chr15 . repeat_region 618981 619007 . ? . description=trf chr15 . repeat_region 618981 619007 . ? . description=dust chr15 . repeat_region 619202 619220 . ? . description=dust chr15 . repeat_region 619665 619687 . ? . description=trf chr15 . repeat_region 619665 619695 . ? . description=dust chr15 . repeat_region 620155 620177 . ? . description=trf chr15 . repeat_region 620155 620177 . ? . description=dust chr15 . repeat_region 620530 620538 . ? . description=dust chr15 . repeat_region 622450 622458 . ? . description=dust chr15 . repeat_region 623147 623187 . ? . description=trf chr15 ensembl protein_coding_gene 620963 622366 . + . ID=Thaps25036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDK3];external_name=Thaps25036;logic_name=jgi_thaps3 chr15 ensembl transcript 620963 622366 . + . ID=Thaps25036;Parent=Thaps25036;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 620963 621887 . + 0 ID=Thaps25036;Parent=Thaps25036;rank=1 chr15 . exon 620963 621887 . + . ID=Thaps25036.1;Parent=Thaps25036;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 622053 622366 . + 0 ID=Thaps25036;Parent=Thaps25036;rank=2 chr15 . exon 622053 622366 . + . ID=Thaps25036.2;Parent=Thaps25036;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 615378 616480 . - . ID=Thaps264321;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDK2];external_name=Thaps264321;logic_name=jgi_thaps3 chr15 ensembl transcript 615378 616480 . - . ID=Thaps264321;Parent=Thaps264321;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 615378 615625 . - 0 ID=Thaps264321;Parent=Thaps264321;rank=2 chr15 . exon 615378 615625 . - . ID=Thaps264321.2;Parent=Thaps264321;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 616109 616480 . - 0 ID=Thaps264321;Parent=Thaps264321;rank=1 chr15 . exon 616109 616480 . - . ID=Thaps264321.1;Parent=Thaps264321;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 622557 625219 . - . ID=Thaps264322;biotype=protein_coding;description=Eukaryotic translation initiation factor [Source:UniProtKB/TrEMBL%3BAcc:B8CDK4];external_name=Thaps264322;logic_name=jgi_thaps3 chr15 ensembl transcript 622557 625219 . - . ID=Thaps264322;Parent=Thaps264322;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 622557 623129 . - 0 ID=Thaps264322;Parent=Thaps264322;rank=7 chr15 . exon 622557 623129 . - . ID=Thaps264322.7;Parent=Thaps264322;constitutive=1;rank=7 chr15 . CDS 623208 623336 . - 0 ID=Thaps264322;Parent=Thaps264322;rank=6 chr15 . exon 623208 623336 . - . ID=Thaps264322.6;Parent=Thaps264322;constitutive=1;rank=6 chr15 . CDS 623522 623777 . - 0 ID=Thaps264322;Parent=Thaps264322;rank=5 chr15 . exon 623522 623777 . - . ID=Thaps264322.5;Parent=Thaps264322;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 623882 623934 . - 0 ID=Thaps264322;Parent=Thaps264322;rank=4 chr15 . exon 623882 623934 . - . ID=Thaps264322.4;Parent=Thaps264322;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 623974 624286 . - 0 ID=Thaps264322;Parent=Thaps264322;rank=3 chr15 . exon 623974 624286 . - . ID=Thaps264322.3;Parent=Thaps264322;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 624668 624865 . - 0 ID=Thaps264322;Parent=Thaps264322;rank=2 chr15 . CDS 625118 625219 . - 0 ID=Thaps264322;Parent=Thaps264322;rank=1 chr15 ensembl protein_coding_gene 628847 629488 . + . ID=Thaps10216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDK6];external_name=Thaps10216;logic_name=jgi_thaps3 chr15 ensembl transcript 628847 629488 . + . ID=Thaps10216;Parent=Thaps10216;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 628847 629488 . + 0 ID=Thaps10216;Parent=Thaps10216;rank=1 chr15 . exon 628847 629488 . + . ID=Thaps10216.1;Parent=Thaps10216;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 627176 628701 . - . ID=Thaps25037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDK5];external_name=Thaps25037;logic_name=jgi_thaps3 chr15 ensembl transcript 627176 628701 . - . ID=Thaps25037;Parent=Thaps25037;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 627176 627871 . - 0 ID=Thaps25037;Parent=Thaps25037;rank=2 chr15 . exon 627176 627871 . - . ID=Thaps25037.2;Parent=Thaps25037;constitutive=1;rank=2 chr15 . CDS 627970 628701 . - 0 ID=Thaps25037;Parent=Thaps25037;rank=1 chr15 . exon 627970 628701 . - . ID=Thaps25037.1;Parent=Thaps25037;constitutive=1;rank=1 chr15 . exon 624668 624865 . - . ID=Thaps264322.2;Parent=Thaps264322;constitutive=1;rank=2 chr15 . exon 625118 625219 . - . ID=Thaps264322.1;Parent=Thaps264322;constitutive=1;rank=1 chr15 . repeat_region 636740 636759 . ? . description=dust chr15 ensembl protein_coding_gene 639843 642513 . + . ID=Thaps10219;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDK8];external_name=Thaps10219;logic_name=jgi_thaps3 chr15 ensembl transcript 639843 642513 . + . ID=Thaps10219;Parent=Thaps10219;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 639843 640091 . + 0 ID=Thaps10219;Parent=Thaps10219;rank=1 chr15 . exon 639843 640091 . + . ID=Thaps10219.1;Parent=Thaps10219;constitutive=1;rank=1 chr15 . CDS 640183 640462 . + 0 ID=Thaps10219;Parent=Thaps10219;rank=2 chr15 . exon 640183 640462 . + . ID=Thaps10219.2;Parent=Thaps10219;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 640556 640654 . + 0 ID=Thaps10219;Parent=Thaps10219;rank=3 chr15 . exon 640556 640654 . + . ID=Thaps10219.3;Parent=Thaps10219;constitutive=1;rank=3 chr15 . CDS 640728 640829 . + 0 ID=Thaps10219;Parent=Thaps10219;rank=4 chr15 . exon 640728 640829 . + . ID=Thaps10219.4;Parent=Thaps10219;constitutive=1;rank=4 chr15 . CDS 641173 641239 . + 0 ID=Thaps10219;Parent=Thaps10219;rank=5 chr15 . exon 641173 641239 . + . ID=Thaps10219.5;Parent=Thaps10219;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 641262 642513 . + 0 ID=Thaps10219;Parent=Thaps10219;rank=6 chr15 . exon 641262 642513 . + . ID=Thaps10219.6;Parent=Thaps10219;constitutive=1;ensembl_end_phase=1;rank=6 chr15 ensembl protein_coding_gene 637121 639684 . + . ID=Thaps25038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDK7];external_name=Thaps25038;logic_name=jgi_thaps3 chr15 ensembl transcript 637121 639684 . + . ID=Thaps25038;Parent=Thaps25038;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 637121 637585 . + 0 ID=Thaps25038;Parent=Thaps25038;rank=1 chr15 . exon 637121 637585 . + . ID=Thaps25038.1;Parent=Thaps25038;constitutive=1;rank=1 chr15 . CDS 637678 639684 . + 0 ID=Thaps25038;Parent=Thaps25038;rank=2 chr15 . exon 637678 639684 . + . ID=Thaps25038.2;Parent=Thaps25038;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 643172 643781 . - . ID=Thaps264323;biotype=protein_coding;description=Set-domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDK9];external_name=Thaps264323;logic_name=jgi_thaps3 chr15 ensembl transcript 643172 643781 . - . ID=Thaps264323;Parent=Thaps264323;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 643172 643781 . - 0 ID=Thaps264323;Parent=Thaps264323;rank=1 chr15 . exon 643172 643781 . - . ID=Thaps264323.1;Parent=Thaps264323;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . repeat_region 648987 649287 . + . description=Copia3I_TP chr15 ensembl protein_coding_gene 647259 648752 . - . ID=Thaps10222;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDL2];external_name=Thaps10222;logic_name=jgi_thaps3 chr15 ensembl transcript 647259 648752 . - . ID=Thaps10222;Parent=Thaps10222;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 647259 648752 . - 0 ID=Thaps10222;Parent=Thaps10222;rank=1 chr15 . exon 647259 648752 . - . ID=Thaps10222.1;Parent=Thaps10222;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 649664 652575 . - . ID=Thaps10223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDL3];external_name=Thaps10223;logic_name=jgi_thaps3 chr15 ensembl transcript 649664 652575 . - . ID=Thaps10223;Parent=Thaps10223;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 649664 649854 . - 0 ID=Thaps10223;Parent=Thaps10223;rank=4 chr15 . exon 649664 649854 . - . ID=Thaps10223.4;Parent=Thaps10223;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 649963 651419 . - 0 ID=Thaps10223;Parent=Thaps10223;rank=3 chr15 . exon 649963 651419 . - . ID=Thaps10223.3;Parent=Thaps10223;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 651451 652105 . - 0 ID=Thaps10223;Parent=Thaps10223;rank=2 chr15 . exon 651451 652105 . - . ID=Thaps10223.2;Parent=Thaps10223;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 652455 652575 . - 0 ID=Thaps10223;Parent=Thaps10223;rank=1 chr15 . exon 652455 652575 . - . ID=Thaps10223.1;Parent=Thaps10223;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 652903 654552 . - . ID=Thaps10224;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDL4];external_name=Thaps10224;logic_name=jgi_thaps3 chr15 ensembl transcript 652903 654552 . - . ID=Thaps10224;Parent=Thaps10224;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 652903 654552 . - 0 ID=Thaps10224;Parent=Thaps10224;rank=1 chr15 . exon 652903 654552 . - . ID=Thaps10224.1;Parent=Thaps10224;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 646060 646817 . + . ID=Thaps25040;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDL1];external_name=Thaps25040;logic_name=jgi_thaps3 chr15 ensembl transcript 646060 646817 . + . ID=Thaps25040;Parent=Thaps25040;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 646060 646595 . + 0 ID=Thaps25040;Parent=Thaps25040;rank=1 chr15 . exon 646060 646595 . + . ID=Thaps25040.1;Parent=Thaps25040;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 646742 646817 . + 0 ID=Thaps25040;Parent=Thaps25040;rank=2 chr15 . exon 646742 646817 . + . ID=Thaps25040.2;Parent=Thaps25040;constitutive=1;ensembl_end_phase=1;rank=2 chr15 ensembl protein_coding_gene 644354 645529 . - . ID=Thaps269843;biotype=protein_coding;description=Putative uncharacterized protein ZFP12 [Source:UniProtKB/TrEMBL%3BAcc:B8CDL0];external_name=ZFP12;logic_name=jgi_thaps3 chr15 ensembl transcript 644354 645529 . - . ID=Thaps269843;Parent=Thaps269843;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 644354 645529 . - 0 ID=Thaps269843;Parent=Thaps269843;rank=1 chr15 . exon 644354 645529 . - . ID=Thaps269843.1;Parent=Thaps269843;constitutive=1;rank=1 chr15 . repeat_region 659849 659857 . ? . description=dust chr15 ensembl protein_coding_gene 655391 660561 . + . ID=Thaps25041;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDL5];external_name=Thaps25041;logic_name=jgi_thaps3 chr15 ensembl transcript 655391 660561 . + . ID=Thaps25041;Parent=Thaps25041;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 655391 658010 . + 0 ID=Thaps25041;Parent=Thaps25041;rank=1 chr15 . exon 655391 658010 . + . ID=Thaps25041.1;Parent=Thaps25041;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 658124 659175 . + 0 ID=Thaps25041;Parent=Thaps25041;rank=2 chr15 . exon 658124 659175 . + . ID=Thaps25041.2;Parent=Thaps25041;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 659249 659821 . + 0 ID=Thaps25041;Parent=Thaps25041;rank=3 chr15 . exon 659249 659821 . + . ID=Thaps25041.3;Parent=Thaps25041;constitutive=1;rank=3 chr15 . CDS 659903 660016 . + 0 ID=Thaps25041;Parent=Thaps25041;rank=4 chr15 . exon 659903 660016 . + . ID=Thaps25041.4;Parent=Thaps25041;constitutive=1;rank=4 chr15 . CDS 660094 660561 . + 0 ID=Thaps25041;Parent=Thaps25041;rank=5 chr15 . exon 660094 660561 . + . ID=Thaps25041.5;Parent=Thaps25041;constitutive=1;rank=5 chr15 ensembl protein_coding_gene 661677 663564 . - . ID=Thaps25042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDL6];external_name=Thaps25042;logic_name=jgi_thaps3 chr15 ensembl transcript 661677 663564 . - . ID=Thaps25042;Parent=Thaps25042;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 661677 662691 . - 0 ID=Thaps25042;Parent=Thaps25042;rank=3 chr15 . exon 661677 662691 . - . ID=Thaps25042.3;Parent=Thaps25042;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 662790 662906 . - 0 ID=Thaps25042;Parent=Thaps25042;rank=2 chr15 . exon 662790 662906 . - . ID=Thaps25042.2;Parent=Thaps25042;constitutive=1;rank=2 chr15 . CDS 662993 663564 . - 0 ID=Thaps25042;Parent=Thaps25042;rank=1 chr15 . exon 662993 663564 . - . ID=Thaps25042.1;Parent=Thaps25042;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . repeat_region 669898 669919 . ? . description=trf chr15 ensembl protein_coding_gene 667624 668130 . - . ID=Thaps10228;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDA7];external_name=Thaps10228;logic_name=jgi_thaps3 chr15 ensembl transcript 667624 668130 . - . ID=Thaps10228;Parent=Thaps10228;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 667624 668130 . - 0 ID=Thaps10228;Parent=Thaps10228;rank=1 chr15 . exon 667624 668130 . - . ID=Thaps10228.1;Parent=Thaps10228;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 668534 669550 . - . ID=Thaps10229;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDA8];external_name=Thaps10229;logic_name=jgi_thaps3 chr15 ensembl transcript 668534 669550 . - . ID=Thaps10229;Parent=Thaps10229;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 668534 669550 . - 0 ID=Thaps10229;Parent=Thaps10229;rank=1 chr15 . exon 668534 669550 . - . ID=Thaps10229.1;Parent=Thaps10229;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 671212 672298 . + . ID=Thaps10230;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDA9];external_name=Thaps10230;logic_name=jgi_thaps3 chr15 ensembl transcript 671212 672298 . + . ID=Thaps10230;Parent=Thaps10230;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 671212 671677 . + 0 ID=Thaps10230;Parent=Thaps10230;rank=1 chr15 . exon 671212 671677 . + . ID=Thaps10230.1;Parent=Thaps10230;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 671850 672298 . + 0 ID=Thaps10230;Parent=Thaps10230;rank=2 chr15 . exon 671850 672298 . + . ID=Thaps10230.2;Parent=Thaps10230;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 664587 665288 . - . ID=Thaps264325;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDA5];external_name=Thaps264325;logic_name=jgi_thaps3 chr15 ensembl transcript 664587 665288 . - . ID=Thaps264325;Parent=Thaps264325;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 664587 665288 . - 0 ID=Thaps264325;Parent=Thaps264325;rank=1 chr15 . exon 664587 665288 . - . ID=Thaps264325.1;Parent=Thaps264325;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 665608 666153 . - . ID=Thaps264326;biotype=protein_coding;description=Probable cytochrome P450 [Source:UniProtKB/TrEMBL%3BAcc:B8CDA6];external_name=Thaps264326;logic_name=jgi_thaps3 chr15 ensembl transcript 665608 666153 . - . ID=Thaps264326;Parent=Thaps264326;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 665608 665964 . - 0 ID=Thaps264326;Parent=Thaps264326;rank=2 chr15 . exon 665608 665964 . - . ID=Thaps264326.2;Parent=Thaps264326;constitutive=1;rank=2 chr15 . CDS 666050 666153 . - 0 ID=Thaps264326;Parent=Thaps264326;rank=1 chr15 . exon 666050 666153 . - . ID=Thaps264326.1;Parent=Thaps264326;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 672406 673173 . - . ID=Thaps269844;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDB0];external_name=Thaps269844;logic_name=jgi_thaps3 chr15 ensembl transcript 672406 673173 . - . ID=Thaps269844;Parent=Thaps269844;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 672406 673173 . - 0 ID=Thaps269844;Parent=Thaps269844;rank=1 chr15 . exon 672406 673173 . - . ID=Thaps269844.1;Parent=Thaps269844;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 674882 676111 . + . ID=Thaps10232;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDB1];external_name=Thaps10232;logic_name=jgi_thaps3 chr15 ensembl transcript 674882 676111 . + . ID=Thaps10232;Parent=Thaps10232;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 674882 676111 . + 0 ID=Thaps10232;Parent=Thaps10232;rank=1 chr15 . exon 674882 676111 . + . ID=Thaps10232.1;Parent=Thaps10232;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 676808 678968 . - . ID=Thaps10233;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDB2];external_name=Thaps10233;logic_name=jgi_thaps3 chr15 ensembl transcript 676808 678968 . - . ID=Thaps10233;Parent=Thaps10233;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 676808 677527 . - 0 ID=Thaps10233;Parent=Thaps10233;rank=2 chr15 . exon 676808 677527 . - . ID=Thaps10233.2;Parent=Thaps10233;constitutive=1;rank=2 chr15 . CDS 677604 678968 . - 0 ID=Thaps10233;Parent=Thaps10233;rank=1 chr15 . exon 677604 678968 . - . ID=Thaps10233.1;Parent=Thaps10233;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 680684 682180 . - . ID=Thaps10234;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDB3];external_name=Thaps10234;logic_name=jgi_thaps3 chr15 ensembl transcript 680684 682180 . - . ID=Thaps10234;Parent=Thaps10234;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 680684 681772 . - 0 ID=Thaps10234;Parent=Thaps10234;rank=2 chr15 . exon 680684 681772 . - . ID=Thaps10234.2;Parent=Thaps10234;constitutive=1;rank=2 chr15 . CDS 681989 682180 . - 0 ID=Thaps10234;Parent=Thaps10234;rank=1 chr15 . exon 681989 682180 . - . ID=Thaps10234.1;Parent=Thaps10234;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 683097 683810 . + . ID=Thaps37725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDB4];external_name=Thaps37725;logic_name=jgi_thaps3 chr15 ensembl transcript 683097 683810 . + . ID=Thaps37725;Parent=Thaps37725;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 683097 683810 . + 0 ID=Thaps37725;Parent=Thaps37725;rank=1 chr15 . exon 683097 683810 . + . ID=Thaps37725.1;Parent=Thaps37725;constitutive=1;rank=1 chr15 . repeat_region 684165 684188 . ? . description=dust chr15 . repeat_region 685648 685664 . ? . description=dust chr15 . repeat_region 693260 693286 . ? . description=trf chr15 . repeat_region 693260 693286 . ? . description=dust chr15 . repeat_region 693360 693514 . + . description=scaffold_15_148_1_390849_391460 chr15 ensembl protein_coding_gene 684493 685590 . + . ID=Thaps10236;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDB5];external_name=Thaps10236;logic_name=jgi_thaps3 chr15 ensembl transcript 684493 685590 . + . ID=Thaps10236;Parent=Thaps10236;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 684493 685590 . + 0 ID=Thaps10236;Parent=Thaps10236;rank=1 chr15 . exon 684493 685590 . + . ID=Thaps10236.1;Parent=Thaps10236;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 692703 693653 . + . ID=Thaps10239;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDB8];external_name=Thaps10239;logic_name=jgi_thaps3 chr15 ensembl transcript 692703 693653 . + . ID=Thaps10239;Parent=Thaps10239;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 692703 693353 . + 0 ID=Thaps10239;Parent=Thaps10239;rank=1 chr15 . exon 692703 693353 . + . ID=Thaps10239.1;Parent=Thaps10239;constitutive=1;rank=1 chr15 . CDS 693639 693653 . + 0 ID=Thaps10239;Parent=Thaps10239;rank=2 chr15 ensembl protein_coding_gene 689961 692430 . - . ID=Thaps25046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDB7];external_name=Thaps25046;logic_name=jgi_thaps3 chr15 ensembl transcript 689961 692430 . - . ID=Thaps25046;Parent=Thaps25046;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 689961 690492 . - 0 ID=Thaps25046;Parent=Thaps25046;rank=3 chr15 . exon 689961 690492 . - . ID=Thaps25046.3;Parent=Thaps25046;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 690572 690808 . - 0 ID=Thaps25046;Parent=Thaps25046;rank=2 chr15 . exon 690572 690808 . - . ID=Thaps25046.2;Parent=Thaps25046;constitutive=1;rank=2 chr15 . CDS 690881 692430 . - 0 ID=Thaps25046;Parent=Thaps25046;rank=1 chr15 . exon 690881 692430 . - . ID=Thaps25046.1;Parent=Thaps25046;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 687578 688348 . + . ID=Thaps264332;biotype=protein_coding;description=Guanyl nucleotide exchange factor [Source:UniProtKB/TrEMBL%3BAcc:B8CDB6];external_name=Thaps264332;logic_name=jgi_thaps3 chr15 ensembl transcript 687578 688348 . + . ID=Thaps264332;Parent=Thaps264332;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 687578 688091 . + 0 ID=Thaps264332;Parent=Thaps264332;rank=1 chr15 . exon 687578 688091 . + . ID=Thaps264332.1;Parent=Thaps264332;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 688140 688348 . + 0 ID=Thaps264332;Parent=Thaps264332;rank=2 chr15 . exon 688140 688348 . + . ID=Thaps264332.2;Parent=Thaps264332;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . exon 693639 693653 . + . ID=Thaps10239.2;Parent=Thaps10239;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 695225 696238 . + . ID=Thaps10241;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDC0];external_name=Thaps10241;logic_name=jgi_thaps3 chr15 ensembl transcript 695225 696238 . + . ID=Thaps10241;Parent=Thaps10241;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 695225 696238 . + 0 ID=Thaps10241;Parent=Thaps10241;rank=1 chr15 . exon 695225 696238 . + . ID=Thaps10241.1;Parent=Thaps10241;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 693904 694707 . - . ID=Thaps25047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDB9];external_name=Thaps25047;logic_name=jgi_thaps3 chr15 ensembl transcript 693904 694707 . - . ID=Thaps25047;Parent=Thaps25047;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 693904 694707 . - 0 ID=Thaps25047;Parent=Thaps25047;rank=1 chr15 . exon 693904 694707 . - . ID=Thaps25047.1;Parent=Thaps25047;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 696852 699403 . + . ID=Thaps25048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDC1];external_name=Thaps25048;logic_name=jgi_thaps3 chr15 ensembl transcript 696852 699403 . + . ID=Thaps25048;Parent=Thaps25048;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 696852 697134 . + 0 ID=Thaps25048;Parent=Thaps25048;rank=1 chr15 . exon 696852 697134 . + . ID=Thaps25048.1;Parent=Thaps25048;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 697164 697975 . + 0 ID=Thaps25048;Parent=Thaps25048;rank=2 chr15 . exon 697164 697975 . + . ID=Thaps25048.2;Parent=Thaps25048;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 698028 699158 . + 0 ID=Thaps25048;Parent=Thaps25048;rank=3 chr15 . exon 698028 699158 . + . ID=Thaps25048.3;Parent=Thaps25048;constitutive=1;rank=3 chr15 . CDS 699284 699403 . + 0 ID=Thaps25048;Parent=Thaps25048;rank=4 chr15 . exon 699284 699403 . + . ID=Thaps25048.4;Parent=Thaps25048;constitutive=1;rank=4 chr15 ensembl protein_coding_gene 701085 703379 . - . ID=Thaps25049;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDC2];external_name=Thaps25049;logic_name=jgi_thaps3 chr15 ensembl transcript 701085 703379 . - . ID=Thaps25049;Parent=Thaps25049;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 701085 703379 . - 0 ID=Thaps25049;Parent=Thaps25049;rank=1 chr15 . exon 701085 703379 . - . ID=Thaps25049.1;Parent=Thaps25049;constitutive=1;rank=1 chr15 . repeat_region 705255 705295 . ? . description=trf chr15 . repeat_region 707292 707355 . ? . description=dust chr15 . repeat_region 707315 707355 . ? . description=trf chr15 . repeat_region 707502 707525 . ? . description=trf chr15 . repeat_region 707502 707525 . ? . description=dust chr15 . repeat_region 707852 707897 . ? . description=trf chr15 . repeat_region 707852 707925 . ? . description=dust chr15 . repeat_region 707857 707915 . ? . description=trf chr15 . repeat_region 708495 708522 . ? . description=dust chr15 . repeat_region 708496 708522 . ? . description=trf chr15 . repeat_region 708558 708577 . ? . description=trf chr15 . repeat_region 708558 708577 . ? . description=dust chr15 . repeat_region 708599 708670 . ? . description=dust chr15 . repeat_region 708647 708670 . ? . description=trf chr15 . repeat_region 710387 711922 . ? . description=trf chr15 ensembl protein_coding_gene 703876 704715 . - . ID=Thaps10244;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDC3];external_name=Thaps10244;logic_name=jgi_thaps3 chr15 ensembl transcript 703876 704715 . - . ID=Thaps10244;Parent=Thaps10244;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 703876 704468 . - 0 ID=Thaps10244;Parent=Thaps10244;rank=2 chr15 . exon 703876 704468 . - . ID=Thaps10244.2;Parent=Thaps10244;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 704556 704715 . - 0 ID=Thaps10244;Parent=Thaps10244;rank=1 chr15 . exon 704556 704715 . - . ID=Thaps10244.1;Parent=Thaps10244;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 706028 707833 . - . ID=Thaps25050;biotype=protein_coding;description=ArfGAP [Source:UniProtKB/TrEMBL%3BAcc:B8CDC5];external_name=Thaps25050;logic_name=jgi_thaps3 chr15 ensembl transcript 706028 707833 . - . ID=Thaps25050;Parent=Thaps25050;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 706028 707833 . - 0 ID=Thaps25050;Parent=Thaps25050;rank=1 chr15 . exon 706028 707833 . - . ID=Thaps25050.1;Parent=Thaps25050;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 708064 718529 . + . ID=Thaps25051;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDC6];external_name=Thaps25051;logic_name=jgi_thaps3 chr15 ensembl transcript 708064 718529 . + . ID=Thaps25051;Parent=Thaps25051;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 708064 708084 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=1 chr15 . exon 708064 708084 . + . ID=Thaps25051.1;Parent=Thaps25051;constitutive=1;rank=1 chr15 . CDS 708165 709103 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=2 chr15 . exon 708165 709103 . + . ID=Thaps25051.2;Parent=Thaps25051;constitutive=1;rank=2 chr15 . CDS 709229 713162 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=3 chr15 . exon 709229 713162 . + . ID=Thaps25051.3;Parent=Thaps25051;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 713239 714230 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=4 chr15 . exon 713239 714230 . + . ID=Thaps25051.4;Parent=Thaps25051;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 714830 715257 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=5 chr15 . CDS 715359 715666 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=6 chr15 . CDS 715695 716080 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=7 chr15 . CDS 716146 716655 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=8 chr15 . CDS 716922 717584 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=9 chr15 . CDS 717650 717698 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=10 chr15 . CDS 717779 718424 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=11 chr15 . CDS 718496 718529 . + 0 ID=Thaps25051;Parent=Thaps25051;rank=12 chr15 ensembl protein_coding_gene 705449 705751 . + . ID=Thaps37640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDC4];external_name=Thaps37640;logic_name=jgi_thaps3 chr15 ensembl transcript 705449 705751 . + . ID=Thaps37640;Parent=Thaps37640;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 705449 705751 . + 0 ID=Thaps37640;Parent=Thaps37640;rank=1 chr15 . exon 705449 705751 . + . ID=Thaps37640.1;Parent=Thaps37640;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 718661 720560 . - . ID=Thaps10248;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDL7];external_name=Thaps10248;logic_name=jgi_thaps3 chr15 ensembl transcript 718661 720560 . - . ID=Thaps10248;Parent=Thaps10248;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 718661 718734 . - 0 ID=Thaps10248;Parent=Thaps10248;rank=4 chr15 . exon 718661 718734 . - . ID=Thaps10248.4;Parent=Thaps10248;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 718815 719364 . - 0 ID=Thaps10248;Parent=Thaps10248;rank=3 chr15 . exon 718815 719364 . - . ID=Thaps10248.3;Parent=Thaps10248;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 719472 719873 . - 0 ID=Thaps10248;Parent=Thaps10248;rank=2 chr15 . exon 719472 719873 . - . ID=Thaps10248.2;Parent=Thaps10248;constitutive=1;rank=2 chr15 . CDS 719991 720560 . - 0 ID=Thaps10248;Parent=Thaps10248;rank=1 chr15 . exon 719991 720560 . - . ID=Thaps10248.1;Parent=Thaps10248;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 721029 722132 . + . ID=Thaps10249;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDL8];external_name=Thaps10249;logic_name=jgi_thaps3 chr15 ensembl transcript 721029 722132 . + . ID=Thaps10249;Parent=Thaps10249;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 721029 722132 . + 0 ID=Thaps10249;Parent=Thaps10249;rank=1 chr15 . exon 721029 722132 . + . ID=Thaps10249.1;Parent=Thaps10249;constitutive=1;rank=1 chr15 . exon 714830 715257 . + . ID=Thaps25051.5;Parent=Thaps25051;constitutive=1;ensembl_end_phase=2;rank=5 chr15 . exon 715359 715666 . + . ID=Thaps25051.6;Parent=Thaps25051;constitutive=1;ensembl_end_phase=2;rank=6 chr15 . exon 715695 716080 . + . ID=Thaps25051.7;Parent=Thaps25051;constitutive=1;ensembl_end_phase=2;rank=7 chr15 . exon 716146 716655 . + . ID=Thaps25051.8;Parent=Thaps25051;constitutive=1;rank=8 chr15 . exon 716922 717584 . + . ID=Thaps25051.9;Parent=Thaps25051;constitutive=1;rank=9 chr15 . exon 717650 717698 . + . ID=Thaps25051.10;Parent=Thaps25051;constitutive=1;ensembl_end_phase=1;rank=10 chr15 . exon 717779 718424 . + . ID=Thaps25051.11;Parent=Thaps25051;constitutive=1;ensembl_end_phase=1;rank=11 chr15 . exon 718496 718529 . + . ID=Thaps25051.12;Parent=Thaps25051;constitutive=1;ensembl_end_phase=1;rank=12 chr15 ensembl protein_coding_gene 722261 726592 . - . ID=Thaps25052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDL9];external_name=Thaps25052;logic_name=jgi_thaps3 chr15 ensembl transcript 722261 726592 . - . ID=Thaps25052;Parent=Thaps25052;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 722261 726592 . - 0 ID=Thaps25052;Parent=Thaps25052;rank=1 chr15 . exon 722261 726592 . - . ID=Thaps25052.1;Parent=Thaps25052;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 729580 731951 . + . ID=Thaps37621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM0];external_name=Thaps37621;logic_name=jgi_thaps3 chr15 ensembl transcript 729580 731951 . + . ID=Thaps37621;Parent=Thaps37621;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 729580 729834 . + 0 ID=Thaps37621;Parent=Thaps37621;rank=1 chr15 . exon 729580 729834 . + . ID=Thaps37621.1;Parent=Thaps37621;constitutive=1;rank=1 chr15 . CDS 729918 729962 . + 0 ID=Thaps37621;Parent=Thaps37621;rank=2 chr15 . exon 729918 729962 . + . ID=Thaps37621.2;Parent=Thaps37621;constitutive=1;rank=2 chr15 . CDS 730017 730463 . + 0 ID=Thaps37621;Parent=Thaps37621;rank=3 chr15 . exon 730017 730463 . + . ID=Thaps37621.3;Parent=Thaps37621;constitutive=1;rank=3 chr15 . CDS 730572 731951 . + 0 ID=Thaps37621;Parent=Thaps37621;rank=4 chr15 . exon 730572 731951 . + . ID=Thaps37621.4;Parent=Thaps37621;constitutive=1;rank=4 chr15 . repeat_region 733453 733497 . ? . description=trf chr15 ensembl protein_coding_gene 735370 736482 . - . ID=Thaps10252;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM1];external_name=Thaps10252;logic_name=jgi_thaps3 chr15 ensembl transcript 735370 736482 . - . ID=Thaps10252;Parent=Thaps10252;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 735370 736482 . - 0 ID=Thaps10252;Parent=Thaps10252;rank=1 chr15 . exon 735370 736482 . - . ID=Thaps10252.1;Parent=Thaps10252;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 737957 739903 . - . ID=Thaps10254;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM3];external_name=Thaps10254;logic_name=jgi_thaps3 chr15 ensembl transcript 737957 739903 . - . ID=Thaps10254;Parent=Thaps10254;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 737957 739903 . - 0 ID=Thaps10254;Parent=Thaps10254;rank=1 chr15 . exon 737957 739903 . - . ID=Thaps10254.1;Parent=Thaps10254;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 736862 737863 . + . ID=Thaps25054;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM2];external_name=Thaps25054;logic_name=jgi_thaps3 chr15 ensembl transcript 736862 737863 . + . ID=Thaps25054;Parent=Thaps25054;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 736862 737863 . + 0 ID=Thaps25054;Parent=Thaps25054;rank=1 chr15 . exon 736862 737863 . + . ID=Thaps25054.1;Parent=Thaps25054;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 742562 743227 . - . ID=Thaps42543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM4];external_name=Thaps42543;logic_name=jgi_thaps3 chr15 ensembl transcript 742562 743227 . - . ID=Thaps42543;Parent=Thaps42543;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 742562 743227 . - 0 ID=Thaps42543;Parent=Thaps42543;rank=1 chr15 . exon 742562 743227 . - . ID=Thaps42543.1;Parent=Thaps42543;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 743887 747597 . - . ID=Thaps10256;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM5];external_name=Thaps10256;logic_name=jgi_thaps3 chr15 ensembl transcript 743887 747597 . - . ID=Thaps10256;Parent=Thaps10256;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 743887 744632 . - 0 ID=Thaps10256;Parent=Thaps10256;rank=8 chr15 . exon 743887 744632 . - . ID=Thaps10256.8;Parent=Thaps10256;constitutive=1;ensembl_end_phase=2;rank=8 chr15 . CDS 744744 745929 . - 0 ID=Thaps10256;Parent=Thaps10256;rank=7 chr15 . exon 744744 745929 . - . ID=Thaps10256.7;Parent=Thaps10256;constitutive=1;ensembl_end_phase=1;rank=7 chr15 . CDS 746009 746030 . - 0 ID=Thaps10256;Parent=Thaps10256;rank=6 chr15 . exon 746009 746030 . - . ID=Thaps10256.6;Parent=Thaps10256;constitutive=1;ensembl_end_phase=1;rank=6 chr15 . CDS 746132 746261 . - 0 ID=Thaps10256;Parent=Thaps10256;rank=5 chr15 . exon 746132 746261 . - . ID=Thaps10256.5;Parent=Thaps10256;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 746351 746493 . - 0 ID=Thaps10256;Parent=Thaps10256;rank=4 chr15 . exon 746351 746493 . - . ID=Thaps10256.4;Parent=Thaps10256;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 746602 746962 . - 0 ID=Thaps10256;Parent=Thaps10256;rank=3 chr15 . exon 746602 746962 . - . ID=Thaps10256.3;Parent=Thaps10256;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 747076 747112 . - 0 ID=Thaps10256;Parent=Thaps10256;rank=2 chr15 . exon 747076 747112 . - . ID=Thaps10256.2;Parent=Thaps10256;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 747196 747597 . - 0 ID=Thaps10256;Parent=Thaps10256;rank=1 chr15 . exon 747196 747597 . - . ID=Thaps10256.1;Parent=Thaps10256;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 749210 749809 . - . ID=Thaps25058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM6];external_name=Thaps25058;logic_name=jgi_thaps3 chr15 ensembl transcript 749210 749809 . - . ID=Thaps25058;Parent=Thaps25058;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 749210 749809 . - 0 ID=Thaps25058;Parent=Thaps25058;rank=1 chr15 . exon 749210 749809 . - . ID=Thaps25058.1;Parent=Thaps25058;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 750087 752355 . + . ID=Thaps25059;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM7];external_name=Thaps25059;logic_name=jgi_thaps3 chr15 ensembl transcript 750087 752355 . + . ID=Thaps25059;Parent=Thaps25059;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 750087 750389 . + 0 ID=Thaps25059;Parent=Thaps25059;rank=1 chr15 . exon 750087 750389 . + . ID=Thaps25059.1;Parent=Thaps25059;constitutive=1;rank=1 chr15 . CDS 750538 750950 . + 0 ID=Thaps25059;Parent=Thaps25059;rank=2 chr15 . exon 750538 750950 . + . ID=Thaps25059.2;Parent=Thaps25059;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 751059 751883 . + 0 ID=Thaps25059;Parent=Thaps25059;rank=3 chr15 . exon 751059 751883 . + . ID=Thaps25059.3;Parent=Thaps25059;constitutive=1;rank=3 chr15 . CDS 751974 752355 . + 0 ID=Thaps25059;Parent=Thaps25059;rank=4 chr15 . exon 751974 752355 . + . ID=Thaps25059.4;Parent=Thaps25059;constitutive=1;ensembl_end_phase=1;rank=4 chr15 ensembl protein_coding_gene 752874 753370 . - . ID=Thaps25060;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM8];external_name=Thaps25060;logic_name=jgi_thaps3 chr15 ensembl transcript 752874 753370 . - . ID=Thaps25060;Parent=Thaps25060;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 752874 752903 . - 0 ID=Thaps25060;Parent=Thaps25060;rank=2 chr15 . exon 752874 752903 . - . ID=Thaps25060.2;Parent=Thaps25060;constitutive=1;rank=2 chr15 . CDS 752984 753370 . - 0 ID=Thaps25060;Parent=Thaps25060;rank=1 chr15 . exon 752984 753370 . - . ID=Thaps25060.1;Parent=Thaps25060;constitutive=1;rank=1 chr15 . repeat_region 761437 761446 . ? . description=dust chr15 ensembl protein_coding_gene 755324 756224 . - . ID=Thaps10262;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN0];external_name=Thaps10262;logic_name=jgi_thaps3 chr15 ensembl transcript 755324 756224 . - . ID=Thaps10262;Parent=Thaps10262;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 755324 755449 . - 0 ID=Thaps10262;Parent=Thaps10262;rank=2 chr15 . exon 755324 755449 . - . ID=Thaps10262.2;Parent=Thaps10262;constitutive=1;rank=2 chr15 . CDS 755589 756224 . - 0 ID=Thaps10262;Parent=Thaps10262;rank=1 chr15 . exon 755589 756224 . - . ID=Thaps10262.1;Parent=Thaps10262;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 759237 760067 . - . ID=Thaps10264;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN2];external_name=Thaps10264;logic_name=jgi_thaps3 chr15 ensembl transcript 759237 760067 . - . ID=Thaps10264;Parent=Thaps10264;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 759237 759822 . - 0 ID=Thaps10264;Parent=Thaps10264;rank=2 chr15 . exon 759237 759822 . - . ID=Thaps10264.2;Parent=Thaps10264;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 759901 760067 . - 0 ID=Thaps10264;Parent=Thaps10264;rank=1 chr15 . exon 759901 760067 . - . ID=Thaps10264.1;Parent=Thaps10264;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 753707 754919 . + . ID=Thaps25061;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDM9];external_name=Thaps25061;logic_name=jgi_thaps3 chr15 ensembl transcript 753707 754919 . + . ID=Thaps25061;Parent=Thaps25061;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 753707 754002 . + 0 ID=Thaps25061;Parent=Thaps25061;rank=1 chr15 . exon 753707 754002 . + . ID=Thaps25061.1;Parent=Thaps25061;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 754108 754390 . + 0 ID=Thaps25061;Parent=Thaps25061;rank=2 chr15 . exon 754108 754390 . + . ID=Thaps25061.2;Parent=Thaps25061;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 754497 754919 . + 0 ID=Thaps25061;Parent=Thaps25061;rank=3 chr15 . exon 754497 754919 . + . ID=Thaps25061.3;Parent=Thaps25061;constitutive=1;rank=3 chr15 ensembl protein_coding_gene 757358 758965 . + . ID=Thaps25062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN1];external_name=Thaps25062;logic_name=jgi_thaps3 chr15 ensembl transcript 757358 758965 . + . ID=Thaps25062;Parent=Thaps25062;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 757358 758965 . + 0 ID=Thaps25062;Parent=Thaps25062;rank=1 chr15 . exon 757358 758965 . + . ID=Thaps25062.1;Parent=Thaps25062;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 761039 763361 . + . ID=Thaps42545;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN3];external_name=Thaps42545;logic_name=jgi_thaps3 chr15 ensembl transcript 761039 763361 . + . ID=Thaps42545;Parent=Thaps42545;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 761039 761131 . + 0 ID=Thaps42545;Parent=Thaps42545;rank=1 chr15 . exon 761039 761131 . + . ID=Thaps42545.1;Parent=Thaps42545;constitutive=1;rank=1 chr15 . CDS 761913 763361 . + 0 ID=Thaps42545;Parent=Thaps42545;rank=2 chr15 . exon 761913 763361 . + . ID=Thaps42545.2;Parent=Thaps42545;constitutive=1;rank=2 chr15 . repeat_region 767417 767487 . ? . description=trf chr15 . repeat_region 767755 767775 . ? . description=trf chr15 . repeat_region 768086 768111 . ? . description=trf chr15 . repeat_region 768089 768113 . ? . description=trf chr15 . repeat_region 769620 769677 . ? . description=trf chr15 ensembl protein_coding_gene 763713 765077 . - . ID=Thaps10266;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN4];external_name=Thaps10266;logic_name=jgi_thaps3 chr15 ensembl transcript 763713 765077 . - . ID=Thaps10266;Parent=Thaps10266;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 763713 764165 . - 0 ID=Thaps10266;Parent=Thaps10266;rank=2 chr15 . exon 763713 764165 . - . ID=Thaps10266.2;Parent=Thaps10266;constitutive=1;rank=2 chr15 . CDS 764268 765077 . - 0 ID=Thaps10266;Parent=Thaps10266;rank=1 chr15 . exon 764268 765077 . - . ID=Thaps10266.1;Parent=Thaps10266;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 770693 772441 . + . ID=Thaps25064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN6];external_name=Thaps25064;logic_name=jgi_thaps3 chr15 ensembl transcript 770693 772441 . + . ID=Thaps25064;Parent=Thaps25064;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 770693 772441 . + 0 ID=Thaps25064;Parent=Thaps25064;rank=1 chr15 . exon 770693 772441 . + . ID=Thaps25064.1;Parent=Thaps25064;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 765864 767178 . - . ID=Thaps264335;biotype=protein_coding;description=Phosphatidylinositol-4-phosphate 5-kinase (PIP5K)-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN5];external_name=Thaps264335;logic_name=jgi_thaps3 chr15 ensembl transcript 765864 767178 . - . ID=Thaps264335;Parent=Thaps264335;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 765864 766026 . - 0 ID=Thaps264335;Parent=Thaps264335;rank=4 chr15 . exon 765864 766026 . - . ID=Thaps264335.4;Parent=Thaps264335;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 766114 766227 . - 0 ID=Thaps264335;Parent=Thaps264335;rank=3 chr15 . exon 766114 766227 . - . ID=Thaps264335.3;Parent=Thaps264335;constitutive=1;rank=3 chr15 . CDS 766366 766941 . - 0 ID=Thaps264335;Parent=Thaps264335;rank=2 chr15 . exon 766366 766941 . - . ID=Thaps264335.2;Parent=Thaps264335;constitutive=1;rank=2 chr15 . CDS 767035 767178 . - 0 ID=Thaps264335;Parent=Thaps264335;rank=1 chr15 . exon 767035 767178 . - . ID=Thaps264335.1;Parent=Thaps264335;constitutive=1;rank=1 chr15 . repeat_region 777254 777286 . ? . description=dust chr15 ensembl protein_coding_gene 778272 779815 . - . ID=Thaps10270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN8];external_name=Thaps10270;logic_name=jgi_thaps3 chr15 ensembl transcript 778272 779815 . - . ID=Thaps10270;Parent=Thaps10270;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 778272 778715 . - 0 ID=Thaps10270;Parent=Thaps10270;rank=2 chr15 . exon 778272 778715 . - . ID=Thaps10270.2;Parent=Thaps10270;constitutive=1;rank=2 chr15 . CDS 778991 779815 . - 0 ID=Thaps10270;Parent=Thaps10270;rank=1 chr15 . exon 778991 779815 . - . ID=Thaps10270.1;Parent=Thaps10270;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 780203 781861 . + . ID=Thaps10271;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN9];external_name=Thaps10271;logic_name=jgi_thaps3 chr15 ensembl transcript 780203 781861 . + . ID=Thaps10271;Parent=Thaps10271;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 780203 781861 . + 0 ID=Thaps10271;Parent=Thaps10271;rank=1 chr15 . exon 780203 781861 . + . ID=Thaps10271.1;Parent=Thaps10271;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 772951 777291 . - . ID=Thaps25065;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDN7];external_name=Thaps25065;logic_name=jgi_thaps3 chr15 ensembl transcript 772951 777291 . - . ID=Thaps25065;Parent=Thaps25065;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 772951 777291 . - 0 ID=Thaps25065;Parent=Thaps25065;rank=1 chr15 . exon 772951 777291 . - . ID=Thaps25065.1;Parent=Thaps25065;constitutive=1;rank=1 chr15 . repeat_region 788093 788194 . ? . description=trf chr15 . repeat_region 788668 788790 . ? . description=trf chr15 ensembl protein_coding_gene 784734 785126 . + . ID=Thaps10273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDP1];external_name=Thaps10273;logic_name=jgi_thaps3 chr15 ensembl transcript 784734 785126 . + . ID=Thaps10273;Parent=Thaps10273;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 784734 785126 . + 0 ID=Thaps10273;Parent=Thaps10273;rank=1 chr15 . exon 784734 785126 . + . ID=Thaps10273.1;Parent=Thaps10273;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 791736 792161 . - . ID=Thaps10275;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDP3];external_name=Thaps10275;logic_name=jgi_thaps3 chr15 ensembl transcript 791736 792161 . - . ID=Thaps10275;Parent=Thaps10275;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 791736 792161 . - 0 ID=Thaps10275;Parent=Thaps10275;rank=1 chr15 . exon 791736 792161 . - . ID=Thaps10275.1;Parent=Thaps10275;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 786928 791472 . + . ID=Thaps25067;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDP2];external_name=Thaps25067;logic_name=jgi_thaps3 chr15 ensembl transcript 786928 791472 . + . ID=Thaps25067;Parent=Thaps25067;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 786928 790019 . + 0 ID=Thaps25067;Parent=Thaps25067;rank=1 chr15 . exon 786928 790019 . + . ID=Thaps25067.1;Parent=Thaps25067;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 790102 790157 . + 0 ID=Thaps25067;Parent=Thaps25067;rank=2 chr15 . exon 790102 790157 . + . ID=Thaps25067.2;Parent=Thaps25067;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 790247 791472 . + 0 ID=Thaps25067;Parent=Thaps25067;rank=3 chr15 . exon 790247 791472 . + . ID=Thaps25067.3;Parent=Thaps25067;constitutive=1;ensembl_end_phase=2;rank=3 chr15 ensembl protein_coding_gene 783165 783512 . + . ID=Thaps37628;biotype=protein_coding;description=40S ribosomal protein S12 [Source:UniProtKB/TrEMBL%3BAcc:B8CDP0];external_name=Thaps37628;logic_name=jgi_thaps3 chr15 ensembl transcript 783165 783512 . + . ID=Thaps37628;Parent=Thaps37628;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 783165 783512 . + 0 ID=Thaps37628;Parent=Thaps37628;rank=1 chr15 . exon 783165 783512 . + . ID=Thaps37628.1;Parent=Thaps37628;constitutive=1;rank=1 chr15 . repeat_region 797324 797346 . ? . description=dust chr15 ensembl protein_coding_gene 793988 794389 . + . ID=Thaps10277;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDP5];external_name=Thaps10277;logic_name=jgi_thaps3 chr15 ensembl transcript 793988 794389 . + . ID=Thaps10277;Parent=Thaps10277;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 793988 794389 . + 0 ID=Thaps10277;Parent=Thaps10277;rank=1 chr15 . exon 793988 794389 . + . ID=Thaps10277.1;Parent=Thaps10277;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 796175 797843 . + . ID=Thaps10278;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDP6];external_name=Thaps10278;logic_name=jgi_thaps3 chr15 ensembl transcript 796175 797843 . + . ID=Thaps10278;Parent=Thaps10278;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 796175 796321 . + 0 ID=Thaps10278;Parent=Thaps10278;rank=1 chr15 . exon 796175 796321 . + . ID=Thaps10278.1;Parent=Thaps10278;constitutive=1;rank=1 chr15 . CDS 796380 797843 . + 0 ID=Thaps10278;Parent=Thaps10278;rank=2 chr15 . exon 796380 797843 . + . ID=Thaps10278.2;Parent=Thaps10278;constitutive=1;rank=2 chr15 ensembl protein_coding_gene 798615 799451 . + . ID=Thaps10279;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDP7];external_name=Thaps10279;logic_name=jgi_thaps3 chr15 ensembl transcript 798615 799451 . + . ID=Thaps10279;Parent=Thaps10279;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 798615 799451 . + 0 ID=Thaps10279;Parent=Thaps10279;rank=1 chr15 . exon 798615 799451 . + . ID=Thaps10279.1;Parent=Thaps10279;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 800061 801034 . + . ID=Thaps10280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDP8];external_name=Thaps10280;logic_name=jgi_thaps3 chr15 ensembl transcript 800061 801034 . + . ID=Thaps10280;Parent=Thaps10280;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 800061 800266 . + 0 ID=Thaps10280;Parent=Thaps10280;rank=1 chr15 . exon 800061 800266 . + . ID=Thaps10280.1;Parent=Thaps10280;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 800411 800635 . + 0 ID=Thaps10280;Parent=Thaps10280;rank=2 chr15 . exon 800411 800635 . + . ID=Thaps10280.2;Parent=Thaps10280;constitutive=1;rank=2 chr15 . CDS 800944 801034 . + 0 ID=Thaps10280;Parent=Thaps10280;rank=3 chr15 . exon 800944 801034 . + . ID=Thaps10280.3;Parent=Thaps10280;constitutive=1;ensembl_end_phase=1;rank=3 chr15 ensembl protein_coding_gene 792912 793612 . - . ID=Thaps37574;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDP4];external_name=Thaps37574;logic_name=jgi_thaps3 chr15 ensembl transcript 792912 793612 . - . ID=Thaps37574;Parent=Thaps37574;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 792912 793044 . - 0 ID=Thaps37574;Parent=Thaps37574;rank=2 chr15 . exon 792912 793044 . - . ID=Thaps37574.2;Parent=Thaps37574;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 793395 793612 . - 0 ID=Thaps37574;Parent=Thaps37574;rank=1 chr15 . exon 793395 793612 . - . ID=Thaps37574.1;Parent=Thaps37574;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . repeat_region 806058 806081 . ? . description=trf chr15 ensembl protein_coding_gene 804477 804926 . - . ID=Thaps10282;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ0];external_name=Thaps10282;logic_name=jgi_thaps3 chr15 ensembl transcript 804477 804926 . - . ID=Thaps10282;Parent=Thaps10282;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 804477 804926 . - 0 ID=Thaps10282;Parent=Thaps10282;rank=1 chr15 . exon 804477 804926 . - . ID=Thaps10282.1;Parent=Thaps10282;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 803039 803405 . - . ID=Thaps25068;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDP9];external_name=Thaps25068;logic_name=jgi_thaps3 chr15 ensembl transcript 803039 803405 . - . ID=Thaps25068;Parent=Thaps25068;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 803039 803146 . - 0 ID=Thaps25068;Parent=Thaps25068;rank=2 chr15 . exon 803039 803146 . - . ID=Thaps25068.2;Parent=Thaps25068;constitutive=1;rank=2 chr15 . CDS 803316 803405 . - 0 ID=Thaps25068;Parent=Thaps25068;rank=1 chr15 . exon 803316 803405 . - . ID=Thaps25068.1;Parent=Thaps25068;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 806146 806533 . + . ID=Thaps25069;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ1];external_name=Thaps25069;logic_name=jgi_thaps3 chr15 ensembl transcript 806146 806533 . + . ID=Thaps25069;Parent=Thaps25069;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 806146 806356 . + 0 ID=Thaps25069;Parent=Thaps25069;rank=1 chr15 . exon 806146 806356 . + . ID=Thaps25069.1;Parent=Thaps25069;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 806394 806533 . + 0 ID=Thaps25069;Parent=Thaps25069;rank=2 chr15 . exon 806394 806533 . + . ID=Thaps25069.2;Parent=Thaps25069;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 810118 811205 . + . ID=Thaps264337;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ2];external_name=Thaps264337;logic_name=jgi_thaps3 chr15 ensembl transcript 810118 811205 . + . ID=Thaps264337;Parent=Thaps264337;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 810118 810412 . + 0 ID=Thaps264337;Parent=Thaps264337;rank=1 chr15 . exon 810118 810412 . + . ID=Thaps264337.1;Parent=Thaps264337;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 810508 811205 . + 0 ID=Thaps264337;Parent=Thaps264337;rank=2 chr15 . exon 810508 811205 . + . ID=Thaps264337.2;Parent=Thaps264337;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 811750 812276 . - . ID=Thaps37665;biotype=protein_coding;description=V-type H+ transporting ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ3];external_name=Thaps37665;logic_name=jgi_thaps3 chr15 ensembl transcript 811750 812276 . - . ID=Thaps37665;Parent=Thaps37665;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 811750 811816 . - 0 ID=Thaps37665;Parent=Thaps37665;rank=3 chr15 . exon 811750 811816 . - . ID=Thaps37665.3;Parent=Thaps37665;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 811892 812133 . - 0 ID=Thaps37665;Parent=Thaps37665;rank=2 chr15 . exon 811892 812133 . - . ID=Thaps37665.2;Parent=Thaps37665;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 812247 812276 . - 0 ID=Thaps37665;Parent=Thaps37665;rank=1 chr15 . exon 812247 812276 . - . ID=Thaps37665.1;Parent=Thaps37665;constitutive=1;rank=1 chr15 . repeat_region 812528 812544 . ? . description=dust chr15 . repeat_region 812673 812680 . ? . description=dust chr15 . repeat_region 814667 814676 . ? . description=dust chr15 . repeat_region 815313 815371 . ? . description=dust chr15 ensembl protein_coding_gene 812996 814573 . + . ID=Thaps10286;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ4];external_name=Thaps10286;logic_name=jgi_thaps3 chr15 ensembl transcript 812996 814573 . + . ID=Thaps10286;Parent=Thaps10286;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 812996 814573 . + 0 ID=Thaps10286;Parent=Thaps10286;rank=1 chr15 . exon 812996 814573 . + . ID=Thaps10286.1;Parent=Thaps10286;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 817276 819392 . - . ID=Thaps25072;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ6];external_name=Thaps25072;logic_name=jgi_thaps3 chr15 ensembl transcript 817276 819392 . - . ID=Thaps25072;Parent=Thaps25072;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 817276 818653 . - 0 ID=Thaps25072;Parent=Thaps25072;rank=3 chr15 . exon 817276 818653 . - . ID=Thaps25072.3;Parent=Thaps25072;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 818931 818965 . - 0 ID=Thaps25072;Parent=Thaps25072;rank=2 chr15 . exon 818931 818965 . - . ID=Thaps25072.2;Parent=Thaps25072;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 819150 819392 . - 0 ID=Thaps25072;Parent=Thaps25072;rank=1 chr15 . exon 819150 819392 . - . ID=Thaps25072.1;Parent=Thaps25072;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 819972 825869 . + . ID=Thaps25073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ7];external_name=Thaps25073;logic_name=jgi_thaps3 chr15 ensembl transcript 819972 825869 . + . ID=Thaps25073;Parent=Thaps25073;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 819972 825869 . + 0 ID=Thaps25073;Parent=Thaps25073;rank=1 chr15 . exon 819972 825869 . + . ID=Thaps25073.1;Parent=Thaps25073;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 815464 816029 . - . ID=Thaps264339;biotype=protein_coding;description=Steroid binding protein 2 [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ5];external_name=Thaps264339;logic_name=jgi_thaps3 chr15 ensembl transcript 815464 816029 . - . ID=Thaps264339;Parent=Thaps264339;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 815464 816029 . - 0 ID=Thaps264339;Parent=Thaps264339;rank=1 chr15 . exon 815464 816029 . - . ID=Thaps264339.1;Parent=Thaps264339;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . repeat_region 826613 827041 . ? . description=trf chr15 . repeat_region 827696 827920 . + . description=TE2c_TP chr15 . repeat_region 828078 828171 . - . description=TE2c_TP chr15 ensembl protein_coding_gene 828538 831480 . - . ID=Thaps25074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ8];external_name=Thaps25074;logic_name=jgi_thaps3 chr15 ensembl transcript 828538 831480 . - . ID=Thaps25074;Parent=Thaps25074;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 828538 829146 . - 0 ID=Thaps25074;Parent=Thaps25074;rank=3 chr15 . exon 828538 829146 . - . ID=Thaps25074.3;Parent=Thaps25074;constitutive=1;rank=3 chr15 . CDS 829233 829328 . - 0 ID=Thaps25074;Parent=Thaps25074;rank=2 chr15 . exon 829233 829328 . - . ID=Thaps25074.2;Parent=Thaps25074;constitutive=1;rank=2 chr15 . CDS 829402 831480 . - 0 ID=Thaps25074;Parent=Thaps25074;rank=1 chr15 . exon 829402 831480 . - . ID=Thaps25074.1;Parent=Thaps25074;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 834744 837151 . - . ID=Thaps10292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDR0];external_name=Thaps10292;logic_name=jgi_thaps3 chr15 ensembl transcript 834744 837151 . - . ID=Thaps10292;Parent=Thaps10292;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 834744 836036 . - 0 ID=Thaps10292;Parent=Thaps10292;rank=4 chr15 . exon 834744 836036 . - . ID=Thaps10292.4;Parent=Thaps10292;constitutive=1;rank=4 chr15 . CDS 836162 836683 . - 0 ID=Thaps10292;Parent=Thaps10292;rank=3 chr15 . exon 836162 836683 . - . ID=Thaps10292.3;Parent=Thaps10292;constitutive=1;rank=3 chr15 . CDS 836764 836842 . - 0 ID=Thaps10292;Parent=Thaps10292;rank=2 chr15 . exon 836764 836842 . - . ID=Thaps10292.2;Parent=Thaps10292;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 836970 837151 . - 0 ID=Thaps10292;Parent=Thaps10292;rank=1 chr15 . exon 836970 837151 . - . ID=Thaps10292.1;Parent=Thaps10292;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 832738 834138 . + . ID=Thaps25075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDQ9];external_name=CINW2;logic_name=jgi_thaps3 chr15 ensembl transcript 832738 834138 . + . ID=Thaps25075;Parent=Thaps25075;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 832738 832932 . + 0 ID=Thaps25075;Parent=Thaps25075;rank=1 chr15 . exon 832738 832932 . + . ID=Thaps25075.1;Parent=Thaps25075;constitutive=1;rank=1 chr15 . CDS 833074 833317 . + 0 ID=Thaps25075;Parent=Thaps25075;rank=2 chr15 . exon 833074 833317 . + . ID=Thaps25075.2;Parent=Thaps25075;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 833426 834138 . + 0 ID=Thaps25075;Parent=Thaps25075;rank=3 chr15 . exon 833426 834138 . + . ID=Thaps25075.3;Parent=Thaps25075;constitutive=1;ensembl_end_phase=2;rank=3 chr15 ensembl protein_coding_gene 837874 839033 . + . ID=Thaps25076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDR1];external_name=Thaps25076;logic_name=jgi_thaps3 chr15 ensembl transcript 837874 839033 . + . ID=Thaps25076;Parent=Thaps25076;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 837874 837926 . + 0 ID=Thaps25076;Parent=Thaps25076;rank=1 chr15 . exon 837874 837926 . + . ID=Thaps25076.1;Parent=Thaps25076;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 838143 838957 . + 0 ID=Thaps25076;Parent=Thaps25076;rank=2 chr15 . exon 838143 838957 . + . ID=Thaps25076.2;Parent=Thaps25076;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 838990 839033 . + 0 ID=Thaps25076;Parent=Thaps25076;rank=3 chr15 . exon 838990 839033 . + . ID=Thaps25076.3;Parent=Thaps25076;constitutive=1;ensembl_end_phase=2;rank=3 chr15 ensembl protein_coding_gene 839392 841764 . - . ID=Thaps25077;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDR2];external_name=Thaps25077;logic_name=jgi_thaps3 chr15 ensembl transcript 839392 841764 . - . ID=Thaps25077;Parent=Thaps25077;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 839392 841764 . - 0 ID=Thaps25077;Parent=Thaps25077;rank=1 chr15 . exon 839392 841764 . - . ID=Thaps25077.1;Parent=Thaps25077;constitutive=1;rank=1 chr15 . repeat_region 848463 848482 . ? . description=trf chr15 . repeat_region 848463 848482 . ? . description=dust chr15 . repeat_region 851209 851248 . ? . description=trf chr15 . repeat_region 851209 851248 . ? . description=dust chr15 ensembl protein_coding_gene 842339 845697 . + . ID=Thaps10295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDR3];external_name=Thaps10295;logic_name=jgi_thaps3 chr15 ensembl transcript 842339 845697 . + . ID=Thaps10295;Parent=Thaps10295;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 842339 842600 . + 0 ID=Thaps10295;Parent=Thaps10295;rank=1 chr15 . exon 842339 842600 . + . ID=Thaps10295.1;Parent=Thaps10295;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 843143 845229 . + 0 ID=Thaps10295;Parent=Thaps10295;rank=2 chr15 . exon 843143 845229 . + . ID=Thaps10295.2;Parent=Thaps10295;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 845368 845697 . + 0 ID=Thaps10295;Parent=Thaps10295;rank=3 chr15 . exon 845368 845697 . + . ID=Thaps10295.3;Parent=Thaps10295;constitutive=1;rank=3 chr15 ensembl protein_coding_gene 851316 853474 . + . ID=Thaps10297;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDR5];external_name=Thaps10297;logic_name=jgi_thaps3 chr15 ensembl transcript 851316 853474 . + . ID=Thaps10297;Parent=Thaps10297;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 851316 851755 . + 0 ID=Thaps10297;Parent=Thaps10297;rank=1 chr15 . exon 851316 851755 . + . ID=Thaps10297.1;Parent=Thaps10297;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . CDS 852175 852352 . + 0 ID=Thaps10297;Parent=Thaps10297;rank=2 chr15 . CDS 852398 852809 . + 0 ID=Thaps10297;Parent=Thaps10297;rank=3 chr15 . CDS 852875 853093 . + 0 ID=Thaps10297;Parent=Thaps10297;rank=4 chr15 . CDS 853185 853474 . + 0 ID=Thaps10297;Parent=Thaps10297;rank=5 chr15 ensembl protein_coding_gene 845914 848389 . - . ID=Thaps12570;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDR4];external_name=Thaps12570;logic_name=jgi_thaps3 chr15 ensembl transcript 845914 848389 . - . ID=Thaps12570;Parent=Thaps12570;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 845914 846119 . - 0 ID=Thaps12570;Parent=Thaps12570;rank=2 chr15 . exon 845914 846119 . - . ID=Thaps12570.2;Parent=Thaps12570;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 846193 848389 . - 0 ID=Thaps12570;Parent=Thaps12570;rank=1 chr15 . exon 846193 848389 . - . ID=Thaps12570.1;Parent=Thaps12570;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . biological_region 858227 858232 0.999 + . logic_name=eponine chr15 . exon 852175 852352 . + . ID=Thaps10297.2;Parent=Thaps10297;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . exon 852398 852809 . + . ID=Thaps10297.3;Parent=Thaps10297;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . exon 852875 853093 . + . ID=Thaps10297.4;Parent=Thaps10297;constitutive=1;rank=4 chr15 . exon 853185 853474 . + . ID=Thaps10297.5;Parent=Thaps10297;constitutive=1;ensembl_end_phase=2;rank=5 chr15 ensembl protein_coding_gene 853749 856691 . - . ID=Thaps10298;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDR6];external_name=Thaps10298;logic_name=jgi_thaps3 chr15 ensembl transcript 853749 856691 . - . ID=Thaps10298;Parent=Thaps10298;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 853749 853949 . - 0 ID=Thaps10298;Parent=Thaps10298;rank=7 chr15 . exon 853749 853949 . - . ID=Thaps10298.7;Parent=Thaps10298;constitutive=1;rank=7 chr15 . CDS 854049 854260 . - 0 ID=Thaps10298;Parent=Thaps10298;rank=6 chr15 . exon 854049 854260 . - . ID=Thaps10298.6;Parent=Thaps10298;constitutive=1;ensembl_end_phase=2;rank=6 chr15 . CDS 854343 854513 . - 0 ID=Thaps10298;Parent=Thaps10298;rank=5 chr15 . exon 854343 854513 . - . ID=Thaps10298.5;Parent=Thaps10298;constitutive=1;rank=5 chr15 . CDS 854593 854773 . - 0 ID=Thaps10298;Parent=Thaps10298;rank=4 chr15 . exon 854593 854773 . - . ID=Thaps10298.4;Parent=Thaps10298;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 854849 854931 . - 0 ID=Thaps10298;Parent=Thaps10298;rank=3 chr15 . exon 854849 854931 . - . ID=Thaps10298.3;Parent=Thaps10298;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 855023 856318 . - 0 ID=Thaps10298;Parent=Thaps10298;rank=2 chr15 . exon 855023 856318 . - . ID=Thaps10298.2;Parent=Thaps10298;constitutive=1;rank=2 chr15 . CDS 856406 856691 . - 0 ID=Thaps10298;Parent=Thaps10298;rank=1 chr15 . exon 856406 856691 . - . ID=Thaps10298.1;Parent=Thaps10298;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 856798 857375 . - . ID=Thaps264341;biotype=protein_coding;description=Short chain dehyrogenase/reductase [Source:UniProtKB/TrEMBL%3BAcc:B8CDR7];external_name=Thaps264341;logic_name=jgi_thaps3 chr15 ensembl transcript 856798 857375 . - . ID=Thaps264341;Parent=Thaps264341;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 856798 857120 . - 0 ID=Thaps264341;Parent=Thaps264341;rank=2 chr15 . exon 856798 857120 . - . ID=Thaps264341.2;Parent=Thaps264341;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 857246 857375 . - 0 ID=Thaps264341;Parent=Thaps264341;rank=1 chr15 . exon 857246 857375 . - . ID=Thaps264341.1;Parent=Thaps264341;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 859478 861718 . + . ID=Thaps37596;biotype=protein_coding;description=GTP pyrophosphokinase [Source:UniProtKB/TrEMBL%3BAcc:B8CDR8];external_name=Thaps37596;logic_name=jgi_thaps3 chr15 ensembl transcript 859478 861718 . + . ID=Thaps37596;Parent=Thaps37596;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 859478 861314 . + 0 ID=Thaps37596;Parent=Thaps37596;rank=1 chr15 . exon 859478 861314 . + . ID=Thaps37596.1;Parent=Thaps37596;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 861396 861718 . + 0 ID=Thaps37596;Parent=Thaps37596;rank=2 chr15 . exon 861396 861718 . + . ID=Thaps37596.2;Parent=Thaps37596;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . repeat_region 863994 864152 . ? . description=trf chr15 . repeat_region 868866 868874 . ? . description=dust chr15 ensembl protein_coding_gene 861997 866809 . - . ID=Thaps25078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDR9];external_name=Thaps25078;logic_name=jgi_thaps3 chr15 ensembl transcript 861997 866809 . - . ID=Thaps25078;Parent=Thaps25078;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 861997 862197 . - 0 ID=Thaps25078;Parent=Thaps25078;rank=9 chr15 . exon 861997 862197 . - . ID=Thaps25078.9;Parent=Thaps25078;constitutive=1;rank=9 chr15 . CDS 862297 862508 . - 0 ID=Thaps25078;Parent=Thaps25078;rank=8 chr15 . exon 862297 862508 . - . ID=Thaps25078.8;Parent=Thaps25078;constitutive=1;ensembl_end_phase=2;rank=8 chr15 . CDS 862591 862761 . - 0 ID=Thaps25078;Parent=Thaps25078;rank=7 chr15 . exon 862591 862761 . - . ID=Thaps25078.7;Parent=Thaps25078;constitutive=1;rank=7 chr15 . CDS 862841 863021 . - 0 ID=Thaps25078;Parent=Thaps25078;rank=6 chr15 . exon 862841 863021 . - . ID=Thaps25078.6;Parent=Thaps25078;constitutive=1;ensembl_end_phase=1;rank=6 chr15 . CDS 863097 863179 . - 0 ID=Thaps25078;Parent=Thaps25078;rank=5 chr15 . exon 863097 863179 . - . ID=Thaps25078.5;Parent=Thaps25078;constitutive=1;ensembl_end_phase=2;rank=5 chr15 . CDS 863306 864685 . - 0 ID=Thaps25078;Parent=Thaps25078;rank=4 chr15 . exon 863306 864685 . - . ID=Thaps25078.4;Parent=Thaps25078;constitutive=1;rank=4 chr15 . CDS 864773 865111 . - 0 ID=Thaps25078;Parent=Thaps25078;rank=3 chr15 . exon 864773 865111 . - . ID=Thaps25078.3;Parent=Thaps25078;constitutive=1;rank=3 chr15 . CDS 865192 866406 . - 0 ID=Thaps25078;Parent=Thaps25078;rank=2 chr15 . exon 865192 866406 . - . ID=Thaps25078.2;Parent=Thaps25078;constitutive=1;rank=2 chr15 . CDS 866491 866809 . - 0 ID=Thaps25078;Parent=Thaps25078;rank=1 chr15 . exon 866491 866809 . - . ID=Thaps25078.1;Parent=Thaps25078;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 867561 871906 . + . ID=Thaps25079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDS0];external_name=Thaps25079;logic_name=jgi_thaps3 chr15 ensembl transcript 867561 871906 . + . ID=Thaps25079;Parent=Thaps25079;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 867561 870597 . + 0 ID=Thaps25079;Parent=Thaps25079;rank=1 chr15 . exon 867561 870597 . + . ID=Thaps25079.1;Parent=Thaps25079;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 870702 871906 . + 0 ID=Thaps25079;Parent=Thaps25079;rank=2 chr15 . exon 870702 871906 . + . ID=Thaps25079.2;Parent=Thaps25079;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 872042 873046 . - . ID=Thaps10302;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDS1];external_name=Thaps10302;logic_name=jgi_thaps3 chr15 ensembl transcript 872042 873046 . - . ID=Thaps10302;Parent=Thaps10302;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 872042 873046 . - 0 ID=Thaps10302;Parent=Thaps10302;rank=1 chr15 . exon 872042 873046 . - . ID=Thaps10302.1;Parent=Thaps10302;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 876427 881009 . - . ID=Thaps25080;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDS2];external_name=Thaps25080;logic_name=jgi_thaps3 chr15 ensembl transcript 876427 881009 . - . ID=Thaps25080;Parent=Thaps25080;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 876427 876713 . - 0 ID=Thaps25080;Parent=Thaps25080;rank=4 chr15 . exon 876427 876713 . - . ID=Thaps25080.4;Parent=Thaps25080;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . CDS 876801 877875 . - 0 ID=Thaps25080;Parent=Thaps25080;rank=3 chr15 . exon 876801 877875 . - . ID=Thaps25080.3;Parent=Thaps25080;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 877964 879180 . - 0 ID=Thaps25080;Parent=Thaps25080;rank=2 chr15 . exon 877964 879180 . - . ID=Thaps25080.2;Parent=Thaps25080;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 879263 881009 . - 0 ID=Thaps25080;Parent=Thaps25080;rank=1 chr15 . exon 879263 881009 . - . ID=Thaps25080.1;Parent=Thaps25080;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . repeat_region 891048 891082 . ? . description=trf chr15 ensembl protein_coding_gene 884480 885671 . + . ID=Thaps264344;biotype=protein_coding;description=3'%2C5'-cyclic nucleotide phosphodiesterase [Source:UniProtKB/TrEMBL%3BAcc:B8CDS3];external_name=Thaps264344;logic_name=jgi_thaps3 chr15 ensembl transcript 884480 885671 . + . ID=Thaps264344;Parent=Thaps264344;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 884480 885154 . + 0 ID=Thaps264344;Parent=Thaps264344;rank=1 chr15 . exon 884480 885154 . + . ID=Thaps264344.1;Parent=Thaps264344;constitutive=1;rank=1 chr15 . CDS 885221 885508 . + 0 ID=Thaps264344;Parent=Thaps264344;rank=2 chr15 . exon 885221 885508 . + . ID=Thaps264344.2;Parent=Thaps264344;constitutive=1;rank=2 chr15 . CDS 885597 885671 . + 0 ID=Thaps264344;Parent=Thaps264344;rank=3 chr15 . exon 885597 885671 . + . ID=Thaps264344.3;Parent=Thaps264344;constitutive=1;rank=3 chr15 ensembl protein_coding_gene 885802 886765 . - . ID=Thaps264345;biotype=protein_coding;description=Ribose methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CDS4];external_name=Thaps264345;logic_name=jgi_thaps3 chr15 ensembl transcript 885802 886765 . - . ID=Thaps264345;Parent=Thaps264345;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 885802 886014 . - 0 ID=Thaps264345;Parent=Thaps264345;rank=3 chr15 . exon 885802 886014 . - . ID=Thaps264345.3;Parent=Thaps264345;constitutive=1;rank=3 chr15 . CDS 886165 886368 . - 0 ID=Thaps264345;Parent=Thaps264345;rank=2 chr15 . exon 886165 886368 . - . ID=Thaps264345.2;Parent=Thaps264345;constitutive=1;rank=2 chr15 . CDS 886423 886765 . - 0 ID=Thaps264345;Parent=Thaps264345;rank=1 chr15 . exon 886423 886765 . - . ID=Thaps264345.1;Parent=Thaps264345;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 889306 889937 . + . ID=Thaps264346;biotype=protein_coding;description=Putative uncharacterized protein HSF45 [Source:UniProtKB/TrEMBL%3BAcc:B8CDS5];external_name=HSF45;logic_name=jgi_thaps3 chr15 ensembl transcript 889306 889937 . + . ID=Thaps264346;Parent=Thaps264346;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 889306 889937 . + 0 ID=Thaps264346;Parent=Thaps264346;rank=1 chr15 . exon 889306 889937 . + . ID=Thaps264346.1;Parent=Thaps264346;constitutive=1;ensembl_end_phase=2;rank=1 chr15 . repeat_region 898785 898792 . ? . description=dust chr15 . repeat_region 900063 900075 . ? . description=dust chr15 ensembl protein_coding_gene 892842 895759 . + . ID=Thaps25084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDS6];external_name=Thaps25084;logic_name=jgi_thaps3 chr15 ensembl transcript 892842 895759 . + . ID=Thaps25084;Parent=Thaps25084;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 892842 895443 . + 0 ID=Thaps25084;Parent=Thaps25084;rank=1 chr15 . exon 892842 895443 . + . ID=Thaps25084.1;Parent=Thaps25084;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 895542 895759 . + 0 ID=Thaps25084;Parent=Thaps25084;rank=2 chr15 . exon 895542 895759 . + . ID=Thaps25084.2;Parent=Thaps25084;constitutive=1;ensembl_end_phase=2;rank=2 chr15 ensembl protein_coding_gene 895840 897741 . - . ID=Thaps25085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDS7];external_name=Thaps25085;logic_name=jgi_thaps3 chr15 ensembl transcript 895840 897741 . - . ID=Thaps25085;Parent=Thaps25085;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 895840 897741 . - 0 ID=Thaps25085;Parent=Thaps25085;rank=1 chr15 . exon 895840 897741 . - . ID=Thaps25085.1;Parent=Thaps25085;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 900197 903109 . - . ID=Thaps25087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDS9];external_name=Thaps25087;logic_name=jgi_thaps3 chr15 ensembl transcript 900197 903109 . - . ID=Thaps25087;Parent=Thaps25087;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 900197 900295 . - 0 ID=Thaps25087;Parent=Thaps25087;rank=4 chr15 . exon 900197 900295 . - . ID=Thaps25087.4;Parent=Thaps25087;constitutive=1;rank=4 chr15 . CDS 900368 900747 . - 0 ID=Thaps25087;Parent=Thaps25087;rank=3 chr15 . exon 900368 900747 . - . ID=Thaps25087.3;Parent=Thaps25087;constitutive=1;ensembl_end_phase=2;rank=3 chr15 . CDS 900829 902610 . - 0 ID=Thaps25087;Parent=Thaps25087;rank=2 chr15 . exon 900829 902610 . - . ID=Thaps25087.2;Parent=Thaps25087;constitutive=1;rank=2 chr15 . CDS 902698 903109 . - 0 ID=Thaps25087;Parent=Thaps25087;rank=1 chr15 ensembl protein_coding_gene 898257 899977 . + . ID=Thaps264347;biotype=protein_coding;description=Nadh-ubiquinone oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8CDS8];external_name=Thaps264347;logic_name=jgi_thaps3 chr15 ensembl transcript 898257 899977 . + . ID=Thaps264347;Parent=Thaps264347;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 898257 898347 . + 0 ID=Thaps264347;Parent=Thaps264347;rank=1 chr15 . exon 898257 898347 . + . ID=Thaps264347.1;Parent=Thaps264347;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 899044 899236 . + 0 ID=Thaps264347;Parent=Thaps264347;rank=2 chr15 . exon 899044 899236 . + . ID=Thaps264347.2;Parent=Thaps264347;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 899276 899885 . + 0 ID=Thaps264347;Parent=Thaps264347;rank=3 chr15 . exon 899276 899885 . + . ID=Thaps264347.3;Parent=Thaps264347;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 899913 899977 . + 0 ID=Thaps264347;Parent=Thaps264347;rank=4 chr15 . exon 899913 899977 . + . ID=Thaps264347.4;Parent=Thaps264347;constitutive=1;ensembl_end_phase=2;rank=4 chr15 . repeat_region 907146 907173 . ? . description=trf chr15 ensembl protein_coding_gene 904006 904494 . - . ID=Thaps10311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDT0];external_name=Thaps10311;logic_name=jgi_thaps3 chr15 ensembl transcript 904006 904494 . - . ID=Thaps10311;Parent=Thaps10311;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 904006 904494 . - 0 ID=Thaps10311;Parent=Thaps10311;rank=1 chr15 . exon 904006 904494 . - . ID=Thaps10311.1;Parent=Thaps10311;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 906075 906563 . + . ID=Thaps10313;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDT0];external_name=Thaps10313;logic_name=jgi_thaps3 chr15 ensembl transcript 906075 906563 . + . ID=Thaps10313;Parent=Thaps10313;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 906075 906563 . + 0 ID=Thaps10313;Parent=Thaps10313;rank=1 chr15 . exon 906075 906563 . + . ID=Thaps10313.1;Parent=Thaps10313;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 907200 909551 . + . ID=Thaps10314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDT3];external_name=Thaps10314;logic_name=jgi_thaps3 chr15 ensembl transcript 907200 909551 . + . ID=Thaps10314;Parent=Thaps10314;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 907200 907413 . + 0 ID=Thaps10314;Parent=Thaps10314;rank=1 chr15 . exon 907200 907413 . + . ID=Thaps10314.1;Parent=Thaps10314;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 907816 909551 . + 0 ID=Thaps10314;Parent=Thaps10314;rank=2 chr15 . exon 907816 909551 . + . ID=Thaps10314.2;Parent=Thaps10314;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . exon 902698 903109 . - . ID=Thaps25087.1;Parent=Thaps25087;constitutive=1;ensembl_end_phase=1;rank=1 chr15 ensembl protein_coding_gene 905014 905316 . + . ID=Thaps25088;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDT1];external_name=Thaps25088;logic_name=jgi_thaps3 chr15 ensembl transcript 905014 905316 . + . ID=Thaps25088;Parent=Thaps25088;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 905014 905316 . + 0 ID=Thaps25088;Parent=Thaps25088;rank=1 chr15 . exon 905014 905316 . + . ID=Thaps25088.1;Parent=Thaps25088;constitutive=1;rank=1 chr15 . repeat_region 917598 917605 . ? . description=dust chr15 ensembl protein_coding_gene 920621 922714 . - . ID=Thaps12695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDT6];external_name=Thaps12695;logic_name=jgi_thaps3 chr15 ensembl transcript 920621 922714 . - . ID=Thaps12695;Parent=Thaps12695;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 920621 922714 . - 0 ID=Thaps12695;Parent=Thaps12695;rank=1 chr15 . exon 920621 922714 . - . ID=Thaps12695.1;Parent=Thaps12695;constitutive=1;rank=1 chr15 ensembl protein_coding_gene 913294 913802 . - . ID=Thaps264350;biotype=protein_coding;description=Putative uncharacterized protein ZFP15 [Source:UniProtKB/TrEMBL%3BAcc:B8CDT4];external_name=ZFP15;logic_name=jgi_thaps3 chr15 ensembl transcript 913294 913802 . - . ID=Thaps264350;Parent=Thaps264350;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 913294 913802 . - 0 ID=Thaps264350;Parent=Thaps264350;rank=1 chr15 . exon 913294 913802 . - . ID=Thaps264350.1;Parent=Thaps264350;constitutive=1;ensembl_end_phase=2;rank=1 chr15 ensembl protein_coding_gene 914677 919113 . - . ID=Thaps269858;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CDT5];external_name=Thaps269858;logic_name=jgi_thaps3 chr15 ensembl transcript 914677 919113 . - . ID=Thaps269858;Parent=Thaps269858;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 914677 915219 . - 0 ID=Thaps269858;Parent=Thaps269858;rank=6 chr15 . exon 914677 915219 . - . ID=Thaps269858.6;Parent=Thaps269858;constitutive=1;rank=6 chr15 . CDS 915301 915589 . - 0 ID=Thaps269858;Parent=Thaps269858;rank=5 chr15 . exon 915301 915589 . - . ID=Thaps269858.5;Parent=Thaps269858;constitutive=1;ensembl_end_phase=1;rank=5 chr15 . CDS 915611 915871 . - 0 ID=Thaps269858;Parent=Thaps269858;rank=4 chr15 . exon 915611 915871 . - . ID=Thaps269858.4;Parent=Thaps269858;constitutive=1;rank=4 chr15 . CDS 916400 916441 . - 0 ID=Thaps269858;Parent=Thaps269858;rank=3 chr15 . exon 916400 916441 . - . ID=Thaps269858.3;Parent=Thaps269858;constitutive=1;rank=3 chr15 . CDS 918465 918901 . - 0 ID=Thaps269858;Parent=Thaps269858;rank=2 chr15 . exon 918465 918901 . - . ID=Thaps269858.2;Parent=Thaps269858;constitutive=1;ensembl_end_phase=2;rank=2 chr15 . CDS 919018 919113 . - 0 ID=Thaps269858;Parent=Thaps269858;rank=1 chr15 . exon 919018 919113 . - . ID=Thaps269858.1;Parent=Thaps269858;constitutive=1;rank=1 chr15 . repeat_region 929857 930041 . ? . description=trf chr15 . repeat_region 929891 930040 . ? . description=trf chr15 . repeat_region 930122 930587 . ? . description=trf chr15 . repeat_region 931158 931268 . ? . description=trf chr15 ensembl protein_coding_gene 927912 929695 . + . ID=Thaps264353;biotype=protein_coding;description=Succinate/fumarate mitochondrial transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CDT7];external_name=Thaps264353;logic_name=jgi_thaps3 chr15 ensembl transcript 927912 929695 . + . ID=Thaps264353;Parent=Thaps264353;biotype=protein_coding;logic_name=jgi_thaps3 chr15 . CDS 927912 928053 . + 0 ID=Thaps264353;Parent=Thaps264353;rank=1 chr15 . exon 927912 928053 . + . ID=Thaps264353.1;Parent=Thaps264353;constitutive=1;ensembl_end_phase=1;rank=1 chr15 . CDS 928471 928606 . + 0 ID=Thaps264353;Parent=Thaps264353;rank=2 chr15 . exon 928471 928606 . + . ID=Thaps264353.2;Parent=Thaps264353;constitutive=1;ensembl_end_phase=1;rank=2 chr15 . CDS 928743 929097 . + 0 ID=Thaps264353;Parent=Thaps264353;rank=3 chr15 . exon 928743 929097 . + . ID=Thaps264353.3;Parent=Thaps264353;constitutive=1;ensembl_end_phase=1;rank=3 chr15 . CDS 929128 929230 . + 0 ID=Thaps264353;Parent=Thaps264353;rank=4 chr15 . exon 929128 929230 . + . ID=Thaps264353.4;Parent=Thaps264353;constitutive=1;ensembl_end_phase=1;rank=4 chr15 . CDS 929343 929398 . + 0 ID=Thaps264353;Parent=Thaps264353;rank=5 chr15 . exon 929343 929398 . + . ID=Thaps264353.5;Parent=Thaps264353;constitutive=1;ensembl_end_phase=2;rank=5 chr15 . CDS 929529 929695 . + 0 ID=Thaps264353;Parent=Thaps264353;rank=6 chr15 . exon 929529 929695 . + . ID=Thaps264353.6;Parent=Thaps264353;constitutive=1;ensembl_end_phase=2;rank=6 ##gff-version 3 ##sequence-region 14 1 998643 chr14 . repeat_region 1701 2052 . ? . description=trf chr14 . repeat_region 3126 3277 . + . description=Copia1LTR_TP chr14 . repeat_region 3427 3489 . ? . description=trf chr14 . repeat_region 5592 5602 . ? . description=dust chr14 . repeat_region 7134 7142 . ? . description=dust chr14 ensembl protein_coding_gene 4416 5859 . - . ID=Thaps24746;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX5];external_name=Thaps24746;logic_name=jgi_thaps3 chr14 ensembl transcript 4416 5859 . - . ID=Thaps24746;Parent=Thaps24746;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 4416 4511 . - 0 ID=Thaps24746;Parent=Thaps24746;rank=5 chr14 . exon 4416 4511 . - . ID=Thaps24746.5;Parent=Thaps24746;constitutive=1;rank=5 chr14 . CDS 4623 4930 . - 0 ID=Thaps24746;Parent=Thaps24746;rank=4 chr14 . exon 4623 4930 . - . ID=Thaps24746.4;Parent=Thaps24746;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 5023 5114 . - 0 ID=Thaps24746;Parent=Thaps24746;rank=3 chr14 . exon 5023 5114 . - . ID=Thaps24746.3;Parent=Thaps24746;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 5242 5368 . - 0 ID=Thaps24746;Parent=Thaps24746;rank=2 chr14 . exon 5242 5368 . - . ID=Thaps24746.2;Parent=Thaps24746;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 5655 5859 . - 0 ID=Thaps24746;Parent=Thaps24746;rank=1 chr14 . exon 5655 5859 . - . ID=Thaps24746.1;Parent=Thaps24746;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 7234 8583 . - . ID=Thaps24747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX6];external_name=Thaps24747;logic_name=jgi_thaps3 chr14 ensembl transcript 7234 8583 . - . ID=Thaps24747;Parent=Thaps24747;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 7234 8583 . - 0 ID=Thaps24747;Parent=Thaps24747;rank=1 chr14 . exon 7234 8583 . - . ID=Thaps24747.1;Parent=Thaps24747;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 8980 10915 . + . ID=Thaps24748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX7];external_name=Thaps24748;logic_name=jgi_thaps3 chr14 ensembl transcript 8980 10915 . + . ID=Thaps24748;Parent=Thaps24748;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 8980 9217 . + 0 ID=Thaps24748;Parent=Thaps24748;rank=1 chr14 . exon 8980 9217 . + . ID=Thaps24748.1;Parent=Thaps24748;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 9316 10075 . + 0 ID=Thaps24748;Parent=Thaps24748;rank=2 chr14 . exon 9316 10075 . + . ID=Thaps24748.2;Parent=Thaps24748;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 10139 10350 . + 0 ID=Thaps24748;Parent=Thaps24748;rank=3 chr14 . CDS 10422 10772 . + 0 ID=Thaps24748;Parent=Thaps24748;rank=4 chr14 . CDS 10863 10915 . + 0 ID=Thaps24748;Parent=Thaps24748;rank=5 chr14 ensembl protein_coding_gene 1700 2056 . + . ID=Thaps9656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX3];external_name=Thaps9656;logic_name=jgi_thaps3 chr14 ensembl transcript 1700 2056 . + . ID=Thaps9656;Parent=Thaps9656;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 1700 2056 . + 0 ID=Thaps9656;Parent=Thaps9656;rank=1 chr14 . exon 1700 2056 . + . ID=Thaps9656.1;Parent=Thaps9656;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 3346 3759 . - . ID=Thaps9657;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX4];external_name=Thaps9657;logic_name=jgi_thaps3 chr14 ensembl transcript 3346 3759 . - . ID=Thaps9657;Parent=Thaps9657;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 3346 3759 . - 0 ID=Thaps9657;Parent=Thaps9657;rank=1 chr14 . exon 3346 3759 . - . ID=Thaps9657.1;Parent=Thaps9657;constitutive=1;rank=1 chr14 ensembl tRNA_gene 17891 18004 . + . ID=EPrTPOG00000000104;biotype=tRNA;description=tRNA-His for anticodon GUG [Source:TRNASCAN_SE%3BAcc:tRNA-His];external_name=tRNA-His;logic_name=ncrna_eg chr14 ensembl transcript 17891 18004 . + . ID=EPrTPOT00000000104;Parent=EPrTPOG00000000104;biotype=tRNA;logic_name=ncrna_eg chr14 . exon 17891 18004 . + . ID=EPrTPOE00000000104;Parent=EPrTPOT00000000104;constitutive=1;rank=1 chr14 . exon 10139 10350 . + . ID=Thaps24748.3;Parent=Thaps24748;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . exon 10422 10772 . + . ID=Thaps24748.4;Parent=Thaps24748;constitutive=1;rank=4 chr14 . exon 10863 10915 . + . ID=Thaps24748.5;Parent=Thaps24748;constitutive=1;ensembl_end_phase=2;rank=5 chr14 ensembl protein_coding_gene 18517 21275 . + . ID=Thaps24750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCY1];external_name=Thaps24750;logic_name=jgi_thaps3 chr14 ensembl transcript 18517 21275 . + . ID=Thaps24750;Parent=Thaps24750;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 18517 18940 . + 0 ID=Thaps24750;Parent=Thaps24750;rank=1 chr14 . exon 18517 18940 . + . ID=Thaps24750.1;Parent=Thaps24750;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 19092 19136 . + 0 ID=Thaps24750;Parent=Thaps24750;rank=2 chr14 . exon 19092 19136 . + . ID=Thaps24750.2;Parent=Thaps24750;constitutive=1;rank=2 chr14 . CDS 19224 19271 . + 0 ID=Thaps24750;Parent=Thaps24750;rank=3 chr14 . exon 19224 19271 . + . ID=Thaps24750.3;Parent=Thaps24750;constitutive=1;rank=3 chr14 . CDS 19444 20455 . + 0 ID=Thaps24750;Parent=Thaps24750;rank=4 chr14 . exon 19444 20455 . + . ID=Thaps24750.4;Parent=Thaps24750;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 20558 21275 . + 0 ID=Thaps24750;Parent=Thaps24750;rank=5 chr14 ensembl protein_coding_gene 15907 16407 . + . ID=Thaps264095;biotype=protein_coding;description=Transcription factor IID%2C TATA box binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX9];external_name=TF2D2;logic_name=jgi_thaps3 chr14 ensembl transcript 15907 16407 . + . ID=Thaps264095;Parent=Thaps264095;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 15907 16407 . + 0 ID=Thaps264095;Parent=Thaps264095;rank=1 chr14 . exon 15907 16407 . + . ID=Thaps264095.1;Parent=Thaps264095;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 17090 17324 . - . ID=Thaps264096;biotype=protein_coding;description=Copper chaperone Cox17 [Source:UniProtKB/TrEMBL%3BAcc:B8CCY0];external_name=Thaps264096;logic_name=jgi_thaps3 chr14 ensembl transcript 17090 17324 . - . ID=Thaps264096;Parent=Thaps264096;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 17090 17324 . - 0 ID=Thaps264096;Parent=Thaps264096;rank=1 chr14 . exon 17090 17324 . - . ID=Thaps264096.1;Parent=Thaps264096;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 13408 14508 . - . ID=Thaps9661;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX8];external_name=Thaps9661;logic_name=jgi_thaps3 chr14 ensembl transcript 13408 14508 . - . ID=Thaps9661;Parent=Thaps9661;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 13408 13989 . - 0 ID=Thaps9661;Parent=Thaps9661;rank=3 chr14 . exon 13408 13989 . - . ID=Thaps9661.3;Parent=Thaps9661;constitutive=1;rank=3 chr14 . CDS 14140 14291 . - 0 ID=Thaps9661;Parent=Thaps9661;rank=2 chr14 . exon 14140 14291 . - . ID=Thaps9661.2;Parent=Thaps9661;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 14406 14508 . - 0 ID=Thaps9661;Parent=Thaps9661;rank=1 chr14 . exon 14406 14508 . - . ID=Thaps9661.1;Parent=Thaps9661;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . repeat_region 22393 22536 . - . description=TE1A_TP chr14 . repeat_region 23533 23566 . ? . description=trf chr14 . repeat_region 27421 27480 . ? . description=trf chr14 . repeat_region 28642 28681 . ? . description=dust chr14 . exon 20558 21275 . + . ID=Thaps24750.5;Parent=Thaps24750;constitutive=1;ensembl_end_phase=1;rank=5 chr14 ensembl protein_coding_gene 28707 30359 . + . ID=Thaps269723;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY4];external_name=Thaps269723;logic_name=jgi_thaps3 chr14 ensembl transcript 28707 30359 . + . ID=Thaps269723;Parent=Thaps269723;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 28707 29067 . + 0 ID=Thaps269723;Parent=Thaps269723;rank=1 chr14 . exon 28707 29067 . + . ID=Thaps269723.1;Parent=Thaps269723;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 29203 29375 . + 0 ID=Thaps269723;Parent=Thaps269723;rank=2 chr14 . exon 29203 29375 . + . ID=Thaps269723.2;Parent=Thaps269723;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 29430 29856 . + 0 ID=Thaps269723;Parent=Thaps269723;rank=3 chr14 . exon 29430 29856 . + . ID=Thaps269723.3;Parent=Thaps269723;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 30148 30359 . + 0 ID=Thaps269723;Parent=Thaps269723;rank=4 chr14 ensembl protein_coding_gene 23080 24269 . - . ID=Thaps37495;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCY2];external_name=Thaps37495;logic_name=jgi_thaps3 chr14 ensembl transcript 23080 24269 . - . ID=Thaps37495;Parent=Thaps37495;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 23080 23219 . - 0 ID=Thaps37495;Parent=Thaps37495;rank=5 chr14 . exon 23080 23219 . - . ID=Thaps37495.5;Parent=Thaps37495;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 23325 23528 . - 0 ID=Thaps37495;Parent=Thaps37495;rank=4 chr14 . exon 23325 23528 . - . ID=Thaps37495.4;Parent=Thaps37495;constitutive=1;rank=4 chr14 . CDS 23631 23780 . - 0 ID=Thaps37495;Parent=Thaps37495;rank=3 chr14 . exon 23631 23780 . - . ID=Thaps37495.3;Parent=Thaps37495;constitutive=1;rank=3 chr14 . CDS 23939 24032 . - 0 ID=Thaps37495;Parent=Thaps37495;rank=2 chr14 . exon 23939 24032 . - . ID=Thaps37495.2;Parent=Thaps37495;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 24132 24269 . - 0 ID=Thaps37495;Parent=Thaps37495;rank=1 chr14 . exon 24132 24269 . - . ID=Thaps37495.1;Parent=Thaps37495;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 25205 26866 . + . ID=Thaps9666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCY3];external_name=Thaps9666;logic_name=jgi_thaps3 chr14 ensembl transcript 25205 26866 . + . ID=Thaps9666;Parent=Thaps9666;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 25205 26866 . + 0 ID=Thaps9666;Parent=Thaps9666;rank=1 chr14 . exon 25205 26866 . + . ID=Thaps9666.1;Parent=Thaps9666;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 26898 27464 . - . ID=Thaps9667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCY4];external_name=Thaps9667;logic_name=jgi_thaps3 chr14 ensembl transcript 26898 27464 . - . ID=Thaps9667;Parent=Thaps9667;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 26898 27464 . - 0 ID=Thaps9667;Parent=Thaps9667;rank=1 chr14 . exon 26898 27464 . - . ID=Thaps9667.1;Parent=Thaps9667;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 30544 32534 . - . ID=Thaps24752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY5];external_name=Thaps24752;logic_name=jgi_thaps3 chr14 ensembl transcript 30544 32534 . - . ID=Thaps24752;Parent=Thaps24752;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 30544 32030 . - 0 ID=Thaps24752;Parent=Thaps24752;rank=2 chr14 . exon 30544 32030 . - . ID=Thaps24752.2;Parent=Thaps24752;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 32258 32534 . - 0 ID=Thaps24752;Parent=Thaps24752;rank=1 chr14 . exon 32258 32534 . - . ID=Thaps24752.1;Parent=Thaps24752;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 32926 52338 . + . ID=Thaps24753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY6];external_name=Thaps24753;logic_name=jgi_thaps3 chr14 ensembl transcript 32926 52338 . + . ID=Thaps24753;Parent=Thaps24753;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 32926 33400 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=1 chr14 . exon 32926 33400 . + . ID=Thaps24753.1;Parent=Thaps24753;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 33527 37179 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=2 chr14 . exon 33527 37179 . + . ID=Thaps24753.2;Parent=Thaps24753;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 37264 41944 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=3 chr14 . exon 37264 41944 . + . ID=Thaps24753.3;Parent=Thaps24753;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 42081 42191 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=4 chr14 . CDS 42275 43213 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=5 chr14 . CDS 43285 43948 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=6 chr14 . CDS 44045 44180 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=7 chr14 . CDS 44264 44551 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=8 chr14 . CDS 44631 44985 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=9 chr14 . CDS 45070 47637 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=10 chr14 . CDS 47719 47788 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=11 chr14 . CDS 47894 48313 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=12 chr14 . CDS 48392 48523 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=13 chr14 . CDS 48608 49576 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=14 chr14 . CDS 49661 50261 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=15 chr14 . CDS 50344 52338 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=16 chr14 . exon 30148 30359 . + . ID=Thaps269723.4;Parent=Thaps269723;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . exon 42081 42191 . + . ID=Thaps24753.4;Parent=Thaps24753;constitutive=1;rank=4 chr14 . exon 42275 43213 . + . ID=Thaps24753.5;Parent=Thaps24753;constitutive=1;rank=5 chr14 . exon 43285 43948 . + . ID=Thaps24753.6;Parent=Thaps24753;constitutive=1;ensembl_end_phase=1;rank=6 chr14 . exon 44045 44180 . + . ID=Thaps24753.7;Parent=Thaps24753;constitutive=1;ensembl_end_phase=1;rank=7 chr14 . exon 44264 44551 . + . ID=Thaps24753.8;Parent=Thaps24753;constitutive=1;rank=8 chr14 . exon 44631 44985 . + . ID=Thaps24753.9;Parent=Thaps24753;constitutive=1;ensembl_end_phase=1;rank=9 chr14 . exon 45070 47637 . + . ID=Thaps24753.10;Parent=Thaps24753;constitutive=1;rank=10 chr14 . exon 47719 47788 . + . ID=Thaps24753.11;Parent=Thaps24753;constitutive=1;ensembl_end_phase=1;rank=11 chr14 . exon 47894 48313 . + . ID=Thaps24753.12;Parent=Thaps24753;constitutive=1;rank=12 chr14 . exon 48392 48523 . + . ID=Thaps24753.13;Parent=Thaps24753;constitutive=1;rank=13 chr14 . exon 48608 49576 . + . ID=Thaps24753.14;Parent=Thaps24753;constitutive=1;rank=14 chr14 . exon 49661 50261 . + . ID=Thaps24753.15;Parent=Thaps24753;constitutive=1;ensembl_end_phase=1;rank=15 chr14 ensembl protein_coding_gene 32926 52338 . + . ID=Thaps24753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY6];external_name=Thaps24753;logic_name=jgi_thaps3 chr14 ensembl transcript 32926 52338 . + . ID=Thaps24753;Parent=Thaps24753;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 32926 33400 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=1 chr14 . CDS 33527 37179 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=2 chr14 . CDS 37264 41944 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=3 chr14 . CDS 42081 42191 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=4 chr14 . CDS 42275 43213 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=5 chr14 . CDS 43285 43948 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=6 chr14 . CDS 44045 44180 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=7 chr14 . CDS 44264 44551 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=8 chr14 . CDS 44631 44985 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=9 chr14 . CDS 45070 47637 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=10 chr14 . CDS 47719 47788 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=11 chr14 . CDS 47894 48313 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=12 chr14 . CDS 48392 48523 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=13 chr14 . CDS 48608 49576 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=14 chr14 . CDS 49661 50261 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=15 chr14 . CDS 50344 52338 . + 0 ID=Thaps24753;Parent=Thaps24753;rank=16 chr14 . exon 50344 52338 . + . ID=Thaps24753.16;Parent=Thaps24753;constitutive=1;rank=16 chr14 ensembl protein_coding_gene 52372 53991 . - . ID=Thaps24754;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY7];external_name=Thaps24754;logic_name=jgi_thaps3 chr14 ensembl transcript 52372 53991 . - . ID=Thaps24754;Parent=Thaps24754;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 52372 53991 . - 0 ID=Thaps24754;Parent=Thaps24754;rank=1 chr14 . exon 52372 53991 . - . ID=Thaps24754.1;Parent=Thaps24754;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 54902 56268 . - . ID=Thaps24755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY8];external_name=Thaps24755;logic_name=jgi_thaps3 chr14 ensembl transcript 54902 56268 . - . ID=Thaps24755;Parent=Thaps24755;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 54902 55831 . - 0 ID=Thaps24755;Parent=Thaps24755;rank=2 chr14 . exon 54902 55831 . - . ID=Thaps24755.2;Parent=Thaps24755;constitutive=1;rank=2 chr14 . CDS 55969 56268 . - 0 ID=Thaps24755;Parent=Thaps24755;rank=1 chr14 . exon 55969 56268 . - . ID=Thaps24755.1;Parent=Thaps24755;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 57905 59910 . - . ID=Thaps9674;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY9];external_name=Thaps9674;logic_name=jgi_thaps3 chr14 ensembl transcript 57905 59910 . - . ID=Thaps9674;Parent=Thaps9674;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 57905 58508 . - 0 ID=Thaps9674;Parent=Thaps9674;rank=2 chr14 . exon 57905 58508 . - . ID=Thaps9674.2;Parent=Thaps9674;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 58571 59910 . - 0 ID=Thaps9674;Parent=Thaps9674;rank=1 chr14 . exon 58571 59910 . - . ID=Thaps9674.1;Parent=Thaps9674;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . repeat_region 60314 60339 . ? . description=trf chr14 . repeat_region 63645 64134 . + . description=TE1A_TP chr14 . repeat_region 68809 68920 . ? . description=trf chr14 . repeat_region 68978 68986 . ? . description=dust chr14 . repeat_region 69247 70031 . + . description=TE1A_TP chr14 ensembl snRNA_gene 69022 69131 . + . ID=EPrTPOG00000000057;biotype=snRNA;description=U6 spliceosomal RNA [Source:RFAM%3BAcc:RF00026];external_name=U6;logic_name=ncrna_eg chr14 ensembl snRNA 69022 69131 . + . ID=EPrTPOT00000000057;Parent=EPrTPOG00000000057;biotype=snRNA;logic_name=ncrna_eg chr14 . exon 69022 69131 . + . ID=EPrTPOE00000000057;Parent=EPrTPOT00000000057;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 60458 61912 . + . ID=Thaps24757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ0];external_name=Thaps24757;logic_name=jgi_thaps3 chr14 ensembl transcript 60458 61912 . + . ID=Thaps24757;Parent=Thaps24757;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 60458 61912 . + 0 ID=Thaps24757;Parent=Thaps24757;rank=1 chr14 . exon 60458 61912 . + . ID=Thaps24757.1;Parent=Thaps24757;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 62770 63396 . - . ID=Thaps24758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ1];external_name=Thaps24758;logic_name=jgi_thaps3 chr14 ensembl transcript 62770 63396 . - . ID=Thaps24758;Parent=Thaps24758;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 62770 63396 . - 0 ID=Thaps24758;Parent=Thaps24758;rank=1 chr14 . exon 62770 63396 . - . ID=Thaps24758.1;Parent=Thaps24758;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 64270 67453 . - . ID=Thaps9677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ2];external_name=Thaps9677;logic_name=jgi_thaps3 chr14 ensembl transcript 64270 67453 . - . ID=Thaps9677;Parent=Thaps9677;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 64270 64955 . - 0 ID=Thaps9677;Parent=Thaps9677;rank=4 chr14 . exon 64270 64955 . - . ID=Thaps9677.4;Parent=Thaps9677;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 65047 65185 . - 0 ID=Thaps9677;Parent=Thaps9677;rank=3 chr14 . exon 65047 65185 . - . ID=Thaps9677.3;Parent=Thaps9677;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 65244 65944 . - 0 ID=Thaps9677;Parent=Thaps9677;rank=2 chr14 . exon 65244 65944 . - . ID=Thaps9677.2;Parent=Thaps9677;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 66046 67453 . - 0 ID=Thaps9677;Parent=Thaps9677;rank=1 chr14 . exon 66046 67453 . - . ID=Thaps9677.1;Parent=Thaps9677;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 67901 68368 . - . ID=Thaps9678;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ3];external_name=Thaps9678;logic_name=jgi_thaps3 chr14 ensembl transcript 67901 68368 . - . ID=Thaps9678;Parent=Thaps9678;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 67901 68368 . - 0 ID=Thaps9678;Parent=Thaps9678;rank=1 chr14 . exon 67901 68368 . - . ID=Thaps9678.1;Parent=Thaps9678;constitutive=1;rank=1 chr14 . repeat_region 70028 70259 . + . description=TE2_TP chr14 . repeat_region 70269 70561 . + . description=TE2_TP chr14 . repeat_region 70658 70693 . - . description=TE2b_TP chr14 . repeat_region 70676 70835 . + . description=TE2c_TP chr14 . repeat_region 70757 70846 . - . description=TE2c_TP chr14 . repeat_region 70819 70865 . - . description=TE2c_TP chr14 . repeat_region 70936 71227 . + . description=TE2c_TP chr14 . repeat_region 71159 71341 . - . description=TE2c_TP chr14 ensembl protein_coding_gene 74722 76752 . + . ID=Thaps24759;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ5];external_name=Thaps24759;logic_name=jgi_thaps3 chr14 ensembl transcript 74722 76752 . + . ID=Thaps24759;Parent=Thaps24759;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 74722 76752 . + 0 ID=Thaps24759;Parent=Thaps24759;rank=1 chr14 . exon 74722 76752 . + . ID=Thaps24759.1;Parent=Thaps24759;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 77056 77854 . - . ID=Thaps24760;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ6];external_name=Thaps24760;logic_name=jgi_thaps3 chr14 ensembl transcript 77056 77854 . - . ID=Thaps24760;Parent=Thaps24760;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 77056 77269 . - 0 ID=Thaps24760;Parent=Thaps24760;rank=3 chr14 . exon 77056 77269 . - . ID=Thaps24760.3;Parent=Thaps24760;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 77352 77715 . - 0 ID=Thaps24760;Parent=Thaps24760;rank=2 chr14 . exon 77352 77715 . - . ID=Thaps24760.2;Parent=Thaps24760;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 77806 77854 . - 0 ID=Thaps24760;Parent=Thaps24760;rank=1 chr14 . exon 77806 77854 . - . ID=Thaps24760.1;Parent=Thaps24760;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 78579 79357 . - . ID=Thaps24761;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ7];external_name=Thaps24761;logic_name=jgi_thaps3 chr14 ensembl transcript 78579 79357 . - . ID=Thaps24761;Parent=Thaps24761;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 78579 78786 . - 0 ID=Thaps24761;Parent=Thaps24761;rank=3 chr14 . exon 78579 78786 . - . ID=Thaps24761.3;Parent=Thaps24761;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 78919 79216 . - 0 ID=Thaps24761;Parent=Thaps24761;rank=2 chr14 . exon 78919 79216 . - . ID=Thaps24761.2;Parent=Thaps24761;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 79294 79357 . - 0 ID=Thaps24761;Parent=Thaps24761;rank=1 chr14 . exon 79294 79357 . - . ID=Thaps24761.1;Parent=Thaps24761;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 71526 72959 . - . ID=Thaps9679;biotype=protein_coding;description=Mannose-6-phosphate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ4];external_name=Thaps9679;logic_name=jgi_thaps3 chr14 ensembl transcript 71526 72959 . - . ID=Thaps9679;Parent=Thaps9679;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 71526 72959 . - 0 ID=Thaps9679;Parent=Thaps9679;rank=1 chr14 . exon 71526 72959 . - . ID=Thaps9679.1;Parent=Thaps9679;constitutive=1;rank=1 chr14 . repeat_region 80500 80519 . ? . description=trf chr14 . repeat_region 81609 81671 . ? . description=dust chr14 . repeat_region 81612 81650 . ? . description=trf chr14 . repeat_region 82151 82570 . - . description=Copia5ALTR_TP chr14 . repeat_region 82571 88671 . - . description=Copia5I_TP chr14 . repeat_region 88672 89091 . - . description=Copia5ALTR_TP chr14 ensembl protein_coding_gene 80103 81998 . - . ID=Thaps24762;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ8];external_name=Thaps24762;logic_name=jgi_thaps3 chr14 ensembl transcript 80103 81998 . - . ID=Thaps24762;Parent=Thaps24762;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 80103 81998 . - 0 ID=Thaps24762;Parent=Thaps24762;rank=1 chr14 . exon 80103 81998 . - . ID=Thaps24762.1;Parent=Thaps24762;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 89582 93404 . - . ID=Thaps9684;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBZ9];external_name=Thaps9684;logic_name=jgi_thaps3 chr14 ensembl transcript 89582 93404 . - . ID=Thaps9684;Parent=Thaps9684;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 89582 91762 . - 0 ID=Thaps9684;Parent=Thaps9684;rank=4 chr14 . exon 89582 91762 . - . ID=Thaps9684.4;Parent=Thaps9684;constitutive=1;rank=4 chr14 . CDS 91857 92349 . - 0 ID=Thaps9684;Parent=Thaps9684;rank=3 chr14 . CDS 92501 92563 . - 0 ID=Thaps9684;Parent=Thaps9684;rank=2 chr14 . CDS 92734 93404 . - 0 ID=Thaps9684;Parent=Thaps9684;rank=1 chr14 ensembl tRNA_gene 93908 93979 . - . ID=EPrTPOG00000000060;biotype=tRNA;description=tRNA-Arg for anticodon UCU [Source:TRNASCAN_SE%3BAcc:tRNA-Arg];external_name=tRNA-Arg;logic_name=ncrna_eg chr14 ensembl transcript 93908 93979 . - . ID=EPrTPOT00000000060;Parent=EPrTPOG00000000060;biotype=tRNA;logic_name=ncrna_eg chr14 . exon 93908 93979 . - . ID=EPrTPOE00000000060;Parent=EPrTPOT00000000060;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 95594 96883 . + . ID=Thaps24763;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC00];external_name=Thaps24763;logic_name=jgi_thaps3 chr14 ensembl transcript 95594 96883 . + . ID=Thaps24763;Parent=Thaps24763;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 95594 96883 . + 0 ID=Thaps24763;Parent=Thaps24763;rank=1 chr14 . exon 95594 96883 . + . ID=Thaps24763.1;Parent=Thaps24763;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 97533 98498 . - . ID=Thaps24764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC01];external_name=Thaps24764;logic_name=jgi_thaps3 chr14 ensembl transcript 97533 98498 . - . ID=Thaps24764;Parent=Thaps24764;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 97533 98498 . - 0 ID=Thaps24764;Parent=Thaps24764;rank=1 chr14 . exon 97533 98498 . - . ID=Thaps24764.1;Parent=Thaps24764;constitutive=1;rank=1 chr14 . exon 91857 92349 . - . ID=Thaps9684.3;Parent=Thaps9684;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . exon 92501 92563 . - . ID=Thaps9684.2;Parent=Thaps9684;constitutive=1;rank=2 chr14 . exon 92734 93404 . - . ID=Thaps9684.1;Parent=Thaps9684;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . repeat_region 100777 100818 . ? . description=trf chr14 . repeat_region 100777 100821 . ? . description=dust chr14 . repeat_region 101677 101684 . ? . description=dust chr14 . repeat_region 107838 107857 . ? . description=trf chr14 ensembl protein_coding_gene 102619 104220 . + . ID=Thaps269724;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC02];external_name=Thaps269724;logic_name=jgi_thaps3 chr14 ensembl transcript 102619 104220 . + . ID=Thaps269724;Parent=Thaps269724;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 102619 103000 . + 0 ID=Thaps269724;Parent=Thaps269724;rank=1 chr14 . exon 102619 103000 . + . ID=Thaps269724.1;Parent=Thaps269724;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 103034 103420 . + 0 ID=Thaps269724;Parent=Thaps269724;rank=2 chr14 . exon 103034 103420 . + . ID=Thaps269724.2;Parent=Thaps269724;constitutive=1;rank=2 chr14 . CDS 103700 104040 . + 0 ID=Thaps269724;Parent=Thaps269724;rank=3 chr14 . exon 103700 104040 . + . ID=Thaps269724.3;Parent=Thaps269724;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 104122 104220 . + 0 ID=Thaps269724;Parent=Thaps269724;rank=4 chr14 . exon 104122 104220 . + . ID=Thaps269724.4;Parent=Thaps269724;constitutive=1;rank=4 chr14 ensembl protein_coding_gene 104488 106148 . - . ID=Thaps9688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC03];external_name=Thaps9688;logic_name=jgi_thaps3 chr14 ensembl transcript 104488 106148 . - . ID=Thaps9688;Parent=Thaps9688;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 104488 105519 . - 0 ID=Thaps9688;Parent=Thaps9688;rank=2 chr14 . exon 104488 105519 . - . ID=Thaps9688.2;Parent=Thaps9688;constitutive=1;rank=2 chr14 . CDS 105666 106148 . - 0 ID=Thaps9688;Parent=Thaps9688;rank=1 chr14 . exon 105666 106148 . - . ID=Thaps9688.1;Parent=Thaps9688;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 107418 109876 . + . ID=Thaps9689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC04];external_name=Thaps9689;logic_name=jgi_thaps3 chr14 ensembl transcript 107418 109876 . + . ID=Thaps9689;Parent=Thaps9689;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 107418 108294 . + 0 ID=Thaps9689;Parent=Thaps9689;rank=1 chr14 . exon 107418 108294 . + . ID=Thaps9689.1;Parent=Thaps9689;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 108377 109156 . + 0 ID=Thaps9689;Parent=Thaps9689;rank=2 chr14 . exon 108377 109156 . + . ID=Thaps9689.2;Parent=Thaps9689;constitutive=1;rank=2 chr14 . CDS 109563 109876 . + 0 ID=Thaps9689;Parent=Thaps9689;rank=3 chr14 . exon 109563 109876 . + . ID=Thaps9689.3;Parent=Thaps9689;constitutive=1;ensembl_end_phase=2;rank=3 chr14 ensembl protein_coding_gene 116942 118514 . - . ID=Thaps24767;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC08];external_name=Thaps24767;logic_name=jgi_thaps3 chr14 ensembl transcript 116942 118514 . - . ID=Thaps24767;Parent=Thaps24767;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 116942 117250 . - 0 ID=Thaps24767;Parent=Thaps24767;rank=2 chr14 . exon 116942 117250 . - . ID=Thaps24767.2;Parent=Thaps24767;constitutive=1;rank=2 chr14 . CDS 117342 118514 . - 0 ID=Thaps24767;Parent=Thaps24767;rank=1 chr14 . exon 117342 118514 . - . ID=Thaps24767.1;Parent=Thaps24767;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 110063 111742 . - . ID=Thaps269725;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC05];external_name=Thaps269725;logic_name=jgi_thaps3 chr14 ensembl transcript 110063 111742 . - . ID=Thaps269725;Parent=Thaps269725;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 110063 110277 . - 0 ID=Thaps269725;Parent=Thaps269725;rank=3 chr14 . exon 110063 110277 . - . ID=Thaps269725.3;Parent=Thaps269725;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 110356 110631 . - 0 ID=Thaps269725;Parent=Thaps269725;rank=2 chr14 . exon 110356 110631 . - . ID=Thaps269725.2;Parent=Thaps269725;constitutive=1;rank=2 chr14 . CDS 110716 111742 . - 0 ID=Thaps269725;Parent=Thaps269725;rank=1 chr14 . exon 110716 111742 . - . ID=Thaps269725.1;Parent=Thaps269725;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 114188 115595 . - . ID=Thaps269726;biotype=protein_coding;description=Probable trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8CC06];external_name=Thaps269726;logic_name=jgi_thaps3 chr14 ensembl transcript 114188 115595 . - . ID=Thaps269726;Parent=Thaps269726;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 114188 114244 . - 0 ID=Thaps269726;Parent=Thaps269726;rank=4 chr14 . exon 114188 114244 . - . ID=Thaps269726.4;Parent=Thaps269726;constitutive=1;rank=4 chr14 . CDS 114336 114562 . - 0 ID=Thaps269726;Parent=Thaps269726;rank=3 chr14 . exon 114336 114562 . - . ID=Thaps269726.3;Parent=Thaps269726;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 114651 115100 . - 0 ID=Thaps269726;Parent=Thaps269726;rank=2 chr14 . exon 114651 115100 . - . ID=Thaps269726.2;Parent=Thaps269726;constitutive=1;rank=2 chr14 . CDS 115223 115595 . - 0 ID=Thaps269726;Parent=Thaps269726;rank=1 chr14 . exon 115223 115595 . - . ID=Thaps269726.1;Parent=Thaps269726;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 115908 116909 . + . ID=Thaps9691;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC07];external_name=Thaps9691;logic_name=jgi_thaps3 chr14 ensembl transcript 115908 116909 . + . ID=Thaps9691;Parent=Thaps9691;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 115908 116909 . + 0 ID=Thaps9691;Parent=Thaps9691;rank=1 chr14 . exon 115908 116909 . + . ID=Thaps9691.1;Parent=Thaps9691;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 118897 119782 . - . ID=Thaps9693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC09];external_name=Thaps9693;logic_name=jgi_thaps3 chr14 ensembl transcript 118897 119782 . - . ID=Thaps9693;Parent=Thaps9693;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 118897 119596 . - 0 ID=Thaps9693;Parent=Thaps9693;rank=2 chr14 . exon 118897 119596 . - . ID=Thaps9693.2;Parent=Thaps9693;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 119688 119782 . - 0 ID=Thaps9693;Parent=Thaps9693;rank=1 chr14 . exon 119688 119782 . - . ID=Thaps9693.1;Parent=Thaps9693;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . repeat_region 120846 120889 . ? . description=dust chr14 ensembl protein_coding_gene 120774 126434 . + . ID=Thaps24768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC10];external_name=Thaps24768;logic_name=jgi_thaps3 chr14 ensembl transcript 120774 126434 . + . ID=Thaps24768;Parent=Thaps24768;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 120774 123425 . + 0 ID=Thaps24768;Parent=Thaps24768;rank=1 chr14 . exon 120774 123425 . + . ID=Thaps24768.1;Parent=Thaps24768;constitutive=1;rank=1 chr14 . CDS 123507 126351 . + 0 ID=Thaps24768;Parent=Thaps24768;rank=2 chr14 . exon 123507 126351 . + . ID=Thaps24768.2;Parent=Thaps24768;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 126376 126434 . + 0 ID=Thaps24768;Parent=Thaps24768;rank=3 chr14 . exon 126376 126434 . + . ID=Thaps24768.3;Parent=Thaps24768;constitutive=1;ensembl_end_phase=2;rank=3 chr14 ensembl protein_coding_gene 128383 129353 . + . ID=Thaps37493;biotype=protein_coding;description=Formyltetrahydrofolate deformylase [Source:UniProtKB/TrEMBL%3BAcc:B8CC12];external_name=Thaps37493;logic_name=jgi_thaps3 chr14 ensembl transcript 128383 129353 . + . ID=Thaps37493;Parent=Thaps37493;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 128383 128628 . + 0 ID=Thaps37493;Parent=Thaps37493;rank=1 chr14 . exon 128383 128628 . + . ID=Thaps37493.1;Parent=Thaps37493;constitutive=1;rank=1 chr14 . CDS 128739 129353 . + 0 ID=Thaps37493;Parent=Thaps37493;rank=2 chr14 . exon 128739 129353 . + . ID=Thaps37493.2;Parent=Thaps37493;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 126545 127969 . - . ID=Thaps9695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC11];external_name=Thaps9695;logic_name=jgi_thaps3 chr14 ensembl transcript 126545 127969 . - . ID=Thaps9695;Parent=Thaps9695;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 126545 126551 . - 0 ID=Thaps9695;Parent=Thaps9695;rank=3 chr14 . exon 126545 126551 . - . ID=Thaps9695.3;Parent=Thaps9695;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 126730 127597 . - 0 ID=Thaps9695;Parent=Thaps9695;rank=2 chr14 . exon 126730 127597 . - . ID=Thaps9695.2;Parent=Thaps9695;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 127846 127969 . - 0 ID=Thaps9695;Parent=Thaps9695;rank=1 chr14 . exon 127846 127969 . - . ID=Thaps9695.1;Parent=Thaps9695;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . repeat_region 137651 137704 . ? . description=trf chr14 . repeat_region 137652 137687 . ? . description=trf chr14 . repeat_region 137728 137753 . ? . description=trf chr14 ensembl protein_coding_gene 132632 133502 . + . ID=Thaps24769;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC14];external_name=Thaps24769;logic_name=jgi_thaps3 chr14 ensembl transcript 132632 133502 . + . ID=Thaps24769;Parent=Thaps24769;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 132632 132694 . + 0 ID=Thaps24769;Parent=Thaps24769;rank=1 chr14 . exon 132632 132694 . + . ID=Thaps24769.1;Parent=Thaps24769;constitutive=1;rank=1 chr14 . CDS 132929 133377 . + 0 ID=Thaps24769;Parent=Thaps24769;rank=2 chr14 . exon 132929 133377 . + . ID=Thaps24769.2;Parent=Thaps24769;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 133484 133502 . + 0 ID=Thaps24769;Parent=Thaps24769;rank=3 chr14 . exon 133484 133502 . + . ID=Thaps24769.3;Parent=Thaps24769;constitutive=1;ensembl_end_phase=1;rank=3 chr14 ensembl protein_coding_gene 134138 134635 . - . ID=Thaps24770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC15];external_name=Thaps24770;logic_name=jgi_thaps3 chr14 ensembl transcript 134138 134635 . - . ID=Thaps24770;Parent=Thaps24770;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 134138 134635 . - 0 ID=Thaps24770;Parent=Thaps24770;rank=1 chr14 . exon 134138 134635 . - . ID=Thaps24770.1;Parent=Thaps24770;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 138737 141220 . + . ID=Thaps24772;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC19];external_name=Thaps24772;logic_name=jgi_thaps3 chr14 ensembl transcript 138737 141220 . + . ID=Thaps24772;Parent=Thaps24772;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 138737 138778 . + 0 ID=Thaps24772;Parent=Thaps24772;rank=1 chr14 . exon 138737 138778 . + . ID=Thaps24772.1;Parent=Thaps24772;constitutive=1;rank=1 chr14 . CDS 138861 141127 . + 0 ID=Thaps24772;Parent=Thaps24772;rank=2 chr14 . exon 138861 141127 . + . ID=Thaps24772.2;Parent=Thaps24772;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 141217 141220 . + 0 ID=Thaps24772;Parent=Thaps24772;rank=3 chr14 ensembl protein_coding_gene 131109 132347 . - . ID=Thaps264109;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC13];external_name=Thaps264109;logic_name=jgi_thaps3 chr14 ensembl transcript 131109 132347 . - . ID=Thaps264109;Parent=Thaps264109;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 131109 131219 . - 0 ID=Thaps264109;Parent=Thaps264109;rank=7 chr14 . exon 131109 131219 . - . ID=Thaps264109.7;Parent=Thaps264109;constitutive=1;rank=7 chr14 . CDS 131364 131420 . - 0 ID=Thaps264109;Parent=Thaps264109;rank=6 chr14 . exon 131364 131420 . - . ID=Thaps264109.6;Parent=Thaps264109;constitutive=1;rank=6 chr14 . CDS 131454 131518 . - 0 ID=Thaps264109;Parent=Thaps264109;rank=5 chr14 . exon 131454 131518 . - . ID=Thaps264109.5;Parent=Thaps264109;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 131602 131759 . - 0 ID=Thaps264109;Parent=Thaps264109;rank=4 chr14 . exon 131602 131759 . - . ID=Thaps264109.4;Parent=Thaps264109;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 131802 131923 . - 0 ID=Thaps264109;Parent=Thaps264109;rank=3 chr14 . exon 131802 131923 . - . ID=Thaps264109.3;Parent=Thaps264109;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 132055 132162 . - 0 ID=Thaps264109;Parent=Thaps264109;rank=2 chr14 . exon 132055 132162 . - . ID=Thaps264109.2;Parent=Thaps264109;constitutive=1;rank=2 chr14 . CDS 132202 132347 . - 0 ID=Thaps264109;Parent=Thaps264109;rank=1 chr14 . exon 132202 132347 . - . ID=Thaps264109.1;Parent=Thaps264109;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 135361 135963 . + . ID=Thaps264111;biotype=protein_coding;description=Thioredoxin [Source:UniProtKB/TrEMBL%3BAcc:B8CC16];external_name=Thaps264111;logic_name=jgi_thaps3 chr14 ensembl transcript 135361 135963 . + . ID=Thaps264111;Parent=Thaps264111;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 135361 135434 . + 0 ID=Thaps264111;Parent=Thaps264111;rank=1 chr14 . exon 135361 135434 . + . ID=Thaps264111.1;Parent=Thaps264111;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 135572 135630 . + 0 ID=Thaps264111;Parent=Thaps264111;rank=2 chr14 . exon 135572 135630 . + . ID=Thaps264111.2;Parent=Thaps264111;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 135790 135963 . + 0 ID=Thaps264111;Parent=Thaps264111;rank=3 chr14 . exon 135790 135963 . + . ID=Thaps264111.3;Parent=Thaps264111;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 136330 137208 . + . ID=Thaps9700;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC17];external_name=Thaps9700;logic_name=jgi_thaps3 chr14 ensembl transcript 136330 137208 . + . ID=Thaps9700;Parent=Thaps9700;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 136330 137208 . + 0 ID=Thaps9700;Parent=Thaps9700;rank=1 chr14 . exon 136330 137208 . + . ID=Thaps9700.1;Parent=Thaps9700;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 137454 138104 . - . ID=Thaps9701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC18];external_name=Thaps9701;logic_name=jgi_thaps3 chr14 ensembl transcript 137454 138104 . - . ID=Thaps9701;Parent=Thaps9701;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 137454 138104 . - 0 ID=Thaps9701;Parent=Thaps9701;rank=1 chr14 . exon 137454 138104 . - . ID=Thaps9701.1;Parent=Thaps9701;constitutive=1;rank=1 chr14 . repeat_region 144944 144951 . ? . description=dust chr14 . biological_region 147675 147679 0.999 + . logic_name=eponine chr14 ensembl protein_coding_gene 145277 146050 . - . ID=Thaps17031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC21];external_name=Thaps17031;logic_name=jgi_thaps3 chr14 ensembl transcript 145277 146050 . - . ID=Thaps17031;Parent=Thaps17031;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 145277 145741 . - 0 ID=Thaps17031;Parent=Thaps17031;rank=2 chr14 . exon 145277 145741 . - . ID=Thaps17031.2;Parent=Thaps17031;constitutive=1;rank=2 chr14 . CDS 145799 146050 . - 0 ID=Thaps17031;Parent=Thaps17031;rank=1 chr14 . exon 145799 146050 . - . ID=Thaps17031.1;Parent=Thaps17031;constitutive=1;rank=1 chr14 . exon 141217 141220 . + . ID=Thaps24772.3;Parent=Thaps24772;constitutive=1;ensembl_end_phase=1;rank=3 chr14 ensembl protein_coding_gene 141440 142849 . - . ID=Thaps42307;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC20];external_name=Thaps42307;logic_name=jgi_thaps3 chr14 ensembl transcript 141440 142849 . - . ID=Thaps42307;Parent=Thaps42307;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 141440 142522 . - 0 ID=Thaps42307;Parent=Thaps42307;rank=2 chr14 . exon 141440 142522 . - . ID=Thaps42307.2;Parent=Thaps42307;constitutive=1;rank=2 chr14 . CDS 142571 142849 . - 0 ID=Thaps42307;Parent=Thaps42307;rank=1 chr14 . exon 142571 142849 . - . ID=Thaps42307.1;Parent=Thaps42307;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 148095 149722 . - . ID=Thaps9705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC22];external_name=Thaps9705;logic_name=jgi_thaps3 chr14 ensembl transcript 148095 149722 . - . ID=Thaps9705;Parent=Thaps9705;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 148095 148130 . - 0 ID=Thaps9705;Parent=Thaps9705;rank=4 chr14 . exon 148095 148130 . - . ID=Thaps9705.4;Parent=Thaps9705;constitutive=1;rank=4 chr14 . CDS 148408 149002 . - 0 ID=Thaps9705;Parent=Thaps9705;rank=3 chr14 . exon 148408 149002 . - . ID=Thaps9705.3;Parent=Thaps9705;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 149131 149308 . - 0 ID=Thaps9705;Parent=Thaps9705;rank=2 chr14 . exon 149131 149308 . - . ID=Thaps9705.2;Parent=Thaps9705;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 149416 149722 . - 0 ID=Thaps9705;Parent=Thaps9705;rank=1 chr14 . exon 149416 149722 . - . ID=Thaps9705.1;Parent=Thaps9705;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . repeat_region 156239 156300 . ? . description=trf chr14 ensembl protein_coding_gene 150224 150955 . + . ID=Thaps18099;biotype=protein_coding;description=Nifu-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC23];external_name=NIFU_2;logic_name=jgi_thaps3 chr14 ensembl transcript 150224 150955 . + . ID=Thaps18099;Parent=Thaps18099;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 150224 150331 . + 0 ID=Thaps18099;Parent=Thaps18099;rank=1 chr14 . exon 150224 150331 . + . ID=Thaps18099.1;Parent=Thaps18099;constitutive=1;rank=1 chr14 . CDS 150434 150955 . + 0 ID=Thaps18099;Parent=Thaps18099;rank=2 chr14 . exon 150434 150955 . + . ID=Thaps18099.2;Parent=Thaps18099;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 153439 155206 . - . ID=Thaps24776;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC25];external_name=Thaps24776;logic_name=jgi_thaps3 chr14 ensembl transcript 153439 155206 . - . ID=Thaps24776;Parent=Thaps24776;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 153439 154109 . - 0 ID=Thaps24776;Parent=Thaps24776;rank=5 chr14 . exon 153439 154109 . - . ID=Thaps24776.5;Parent=Thaps24776;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 154136 154488 . - 0 ID=Thaps24776;Parent=Thaps24776;rank=4 chr14 . exon 154136 154488 . - . ID=Thaps24776.4;Parent=Thaps24776;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 154610 154853 . - 0 ID=Thaps24776;Parent=Thaps24776;rank=3 chr14 . exon 154610 154853 . - . ID=Thaps24776.3;Parent=Thaps24776;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 154960 155096 . - 0 ID=Thaps24776;Parent=Thaps24776;rank=2 chr14 . exon 154960 155096 . - . ID=Thaps24776.2;Parent=Thaps24776;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 155199 155206 . - 0 ID=Thaps24776;Parent=Thaps24776;rank=1 chr14 . exon 155199 155206 . - . ID=Thaps24776.1;Parent=Thaps24776;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 155539 156556 . + . ID=Thaps24777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC26];external_name=Thaps24777;logic_name=jgi_thaps3 chr14 ensembl transcript 155539 156556 . + . ID=Thaps24777;Parent=Thaps24777;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 155539 155635 . + 0 ID=Thaps24777;Parent=Thaps24777;rank=1 chr14 . exon 155539 155635 . + . ID=Thaps24777.1;Parent=Thaps24777;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 155910 156556 . + 0 ID=Thaps24777;Parent=Thaps24777;rank=2 chr14 . exon 155910 156556 . + . ID=Thaps24777.2;Parent=Thaps24777;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 151629 153341 . + . ID=Thaps9707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC24];external_name=Thaps9707;logic_name=jgi_thaps3 chr14 ensembl transcript 151629 153341 . + . ID=Thaps9707;Parent=Thaps9707;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 151629 151848 . + 0 ID=Thaps9707;Parent=Thaps9707;rank=1 chr14 . exon 151629 151848 . + . ID=Thaps9707.1;Parent=Thaps9707;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 151897 151934 . + 0 ID=Thaps9707;Parent=Thaps9707;rank=2 chr14 . exon 151897 151934 . + . ID=Thaps9707.2;Parent=Thaps9707;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 152061 153341 . + 0 ID=Thaps9707;Parent=Thaps9707;rank=3 chr14 . exon 152061 153341 . + . ID=Thaps9707.3;Parent=Thaps9707;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 157325 158629 . - . ID=Thaps9710;biotype=protein_coding;description=Map kinase [Source:UniProtKB/TrEMBL%3BAcc:B8CC27];external_name=MAPK;logic_name=jgi_thaps3 chr14 ensembl transcript 157325 158629 . - . ID=Thaps9710;Parent=Thaps9710;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 157325 158629 . - 0 ID=Thaps9710;Parent=Thaps9710;rank=1 chr14 . exon 157325 158629 . - . ID=Thaps9710.1;Parent=Thaps9710;constitutive=1;rank=1 chr14 . repeat_region 163945 164014 . + . description=TE2a_TP chr14 ensembl protein_coding_gene 164895 166538 . + . ID=Thaps24779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC30];external_name=Thaps24779;logic_name=jgi_thaps3 chr14 ensembl transcript 164895 166538 . + . ID=Thaps24779;Parent=Thaps24779;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 164895 166538 . + 0 ID=Thaps24779;Parent=Thaps24779;rank=1 chr14 . exon 164895 166538 . + . ID=Thaps24779.1;Parent=Thaps24779;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 168669 173404 . - . ID=Thaps24780;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC32];external_name=Thaps24780;logic_name=jgi_thaps3 chr14 ensembl transcript 168669 173404 . - . ID=Thaps24780;Parent=Thaps24780;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 168669 169091 . - 0 ID=Thaps24780;Parent=Thaps24780;rank=7 chr14 . exon 168669 169091 . - . ID=Thaps24780.7;Parent=Thaps24780;constitutive=1;rank=7 chr14 . CDS 169182 169978 . - 0 ID=Thaps24780;Parent=Thaps24780;rank=6 chr14 . exon 169182 169978 . - . ID=Thaps24780.6;Parent=Thaps24780;constitutive=1;ensembl_end_phase=2;rank=6 chr14 . CDS 170066 170201 . - 0 ID=Thaps24780;Parent=Thaps24780;rank=5 chr14 . CDS 170290 170418 . - 0 ID=Thaps24780;Parent=Thaps24780;rank=4 chr14 . CDS 170667 170918 . - 0 ID=Thaps24780;Parent=Thaps24780;rank=3 chr14 . CDS 171031 171990 . - 0 ID=Thaps24780;Parent=Thaps24780;rank=2 chr14 . CDS 172028 173404 . - 0 ID=Thaps24780;Parent=Thaps24780;rank=1 chr14 ensembl protein_coding_gene 160805 163546 . + . ID=Thaps29936;biotype=protein_coding;description=DNA replication licensing factor MCM2 [Source:UniProtKB/TrEMBL%3BAcc:B8CC29];external_name=Thaps29936;logic_name=jgi_thaps3 chr14 ensembl transcript 160805 163546 . + . ID=Thaps29936;Parent=Thaps29936;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 160805 160885 . + 0 ID=Thaps29936;Parent=Thaps29936;rank=1 chr14 . exon 160805 160885 . + . ID=Thaps29936.1;Parent=Thaps29936;constitutive=1;rank=1 chr14 . CDS 160988 162440 . + 0 ID=Thaps29936;Parent=Thaps29936;rank=2 chr14 . exon 160988 162440 . + . ID=Thaps29936.2;Parent=Thaps29936;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 162513 163546 . + 0 ID=Thaps29936;Parent=Thaps29936;rank=3 chr14 . exon 162513 163546 . + . ID=Thaps29936.3;Parent=Thaps29936;constitutive=1;ensembl_end_phase=2;rank=3 chr14 ensembl protein_coding_gene 159809 160615 . + . ID=Thaps9711;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC28];external_name=Thaps9711;logic_name=jgi_thaps3 chr14 ensembl transcript 159809 160615 . + . ID=Thaps9711;Parent=Thaps9711;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 159809 160142 . + 0 ID=Thaps9711;Parent=Thaps9711;rank=1 chr14 . exon 159809 160142 . + . ID=Thaps9711.1;Parent=Thaps9711;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 160317 160615 . + 0 ID=Thaps9711;Parent=Thaps9711;rank=2 chr14 . exon 160317 160615 . + . ID=Thaps9711.2;Parent=Thaps9711;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 167516 168148 . + . ID=Thaps9714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC31];external_name=Thaps9714;logic_name=jgi_thaps3 chr14 ensembl transcript 167516 168148 . + . ID=Thaps9714;Parent=Thaps9714;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 167516 168148 . + 0 ID=Thaps9714;Parent=Thaps9714;rank=1 chr14 . exon 167516 168148 . + . ID=Thaps9714.1;Parent=Thaps9714;constitutive=1;rank=1 chr14 . repeat_region 170442 170580 . - . description=scaffold_2_26_1_61133_64081 chr14 . exon 170066 170201 . - . ID=Thaps24780.5;Parent=Thaps24780;constitutive=1;ensembl_end_phase=1;rank=5 chr14 . exon 170290 170418 . - . ID=Thaps24780.4;Parent=Thaps24780;constitutive=1;rank=4 chr14 . exon 170667 170918 . - . ID=Thaps24780.3;Parent=Thaps24780;constitutive=1;rank=3 chr14 . exon 171031 171990 . - . ID=Thaps24780.2;Parent=Thaps24780;constitutive=1;rank=2 chr14 . exon 172028 173404 . - . ID=Thaps24780.1;Parent=Thaps24780;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 178940 179675 . + . ID=Thaps37464;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8CC36];external_name=Thaps37464;logic_name=jgi_thaps3 chr14 ensembl transcript 178940 179675 . + . ID=Thaps37464;Parent=Thaps37464;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 178940 179014 . + 0 ID=Thaps37464;Parent=Thaps37464;rank=1 chr14 . exon 178940 179014 . + . ID=Thaps37464.1;Parent=Thaps37464;constitutive=1;rank=1 chr14 . CDS 179125 179233 . + 0 ID=Thaps37464;Parent=Thaps37464;rank=2 chr14 . exon 179125 179233 . + . ID=Thaps37464.2;Parent=Thaps37464;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 179323 179675 . + 0 ID=Thaps37464;Parent=Thaps37464;rank=3 chr14 . exon 179323 179675 . + . ID=Thaps37464.3;Parent=Thaps37464;constitutive=1;ensembl_end_phase=2;rank=3 chr14 ensembl protein_coding_gene 177251 177793 . - . ID=Thaps37516;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC35];external_name=Thaps37516;logic_name=jgi_thaps3 chr14 ensembl transcript 177251 177793 . - . ID=Thaps37516;Parent=Thaps37516;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 177251 177793 . - 0 ID=Thaps37516;Parent=Thaps37516;rank=1 chr14 . exon 177251 177793 . - . ID=Thaps37516.1;Parent=Thaps37516;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 176351 177125 . + . ID=Thaps42320;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC34];external_name=Thaps42320;logic_name=jgi_thaps3 chr14 ensembl transcript 176351 177125 . + . ID=Thaps42320;Parent=Thaps42320;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 176351 176450 . + 0 ID=Thaps42320;Parent=Thaps42320;rank=1 chr14 . exon 176351 176450 . + . ID=Thaps42320.1;Parent=Thaps42320;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 176551 177125 . + 0 ID=Thaps42320;Parent=Thaps42320;rank=2 chr14 . exon 176551 177125 . + . ID=Thaps42320.2;Parent=Thaps42320;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 174493 175875 . + . ID=Thaps9716;biotype=protein_coding;description=Eukaryotic translation initiation factor 4A [Source:UniProtKB/TrEMBL%3BAcc:B8CC33];external_name=Thaps9716;logic_name=jgi_thaps3 chr14 ensembl transcript 174493 175875 . + . ID=Thaps9716;Parent=Thaps9716;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 174493 174624 . + 0 ID=Thaps9716;Parent=Thaps9716;rank=1 chr14 . exon 174493 174624 . + . ID=Thaps9716.1;Parent=Thaps9716;constitutive=1;rank=1 chr14 . CDS 174898 175875 . + 0 ID=Thaps9716;Parent=Thaps9716;rank=2 chr14 . exon 174898 175875 . + . ID=Thaps9716.2;Parent=Thaps9716;constitutive=1;rank=2 chr14 . biological_region 183264 183268 0.999 - . logic_name=eponine chr14 ensembl protein_coding_gene 181147 181902 . + . ID=Thaps264121;biotype=protein_coding;description=Glutathione s-transferase [Source:UniProtKB/TrEMBL%3BAcc:B8CC38];external_name=Thaps264121;logic_name=jgi_thaps3 chr14 ensembl transcript 181147 181902 . + . ID=Thaps264121;Parent=Thaps264121;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 181147 181548 . + 0 ID=Thaps264121;Parent=Thaps264121;rank=1 chr14 . exon 181147 181548 . + . ID=Thaps264121.1;Parent=Thaps264121;constitutive=1;rank=1 chr14 . CDS 181621 181902 . + 0 ID=Thaps264121;Parent=Thaps264121;rank=2 chr14 . exon 181621 181902 . + . ID=Thaps264121.2;Parent=Thaps264121;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 187113 188120 . + . ID=Thaps264122;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC40];external_name=Thaps264122;logic_name=jgi_thaps3 chr14 ensembl transcript 187113 188120 . + . ID=Thaps264122;Parent=Thaps264122;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 187113 187558 . + 0 ID=Thaps264122;Parent=Thaps264122;rank=1 chr14 . exon 187113 187558 . + . ID=Thaps264122.1;Parent=Thaps264122;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 187712 188120 . + 0 ID=Thaps264122;Parent=Thaps264122;rank=2 chr14 . exon 187712 188120 . + . ID=Thaps264122.2;Parent=Thaps264122;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 179883 180866 . - . ID=Thaps9720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC37];external_name=Thaps9720;logic_name=jgi_thaps3 chr14 ensembl transcript 179883 180866 . - . ID=Thaps9720;Parent=Thaps9720;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 179883 180127 . - 0 ID=Thaps9720;Parent=Thaps9720;rank=3 chr14 . exon 179883 180127 . - . ID=Thaps9720.3;Parent=Thaps9720;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 180318 180387 . - 0 ID=Thaps9720;Parent=Thaps9720;rank=2 chr14 . exon 180318 180387 . - . ID=Thaps9720.2;Parent=Thaps9720;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 180519 180866 . - 0 ID=Thaps9720;Parent=Thaps9720;rank=1 chr14 . exon 180519 180866 . - . ID=Thaps9720.1;Parent=Thaps9720;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 182694 183044 . - . ID=Thaps9722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC39];external_name=Thaps9722;logic_name=jgi_thaps3 chr14 ensembl transcript 182694 183044 . - . ID=Thaps9722;Parent=Thaps9722;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 182694 183044 . - 0 ID=Thaps9722;Parent=Thaps9722;rank=1 chr14 . exon 182694 183044 . - . ID=Thaps9722.1;Parent=Thaps9722;constitutive=1;rank=1 chr14 . repeat_region 198874 198935 . ? . description=dust chr14 . repeat_region 198875 198927 . ? . description=trf chr14 ensembl protein_coding_gene 194242 195738 . - . ID=Thaps24783;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC43];external_name=Thaps24783;logic_name=jgi_thaps3 chr14 ensembl transcript 194242 195738 . - . ID=Thaps24783;Parent=Thaps24783;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 194242 195157 . - 0 ID=Thaps24783;Parent=Thaps24783;rank=2 chr14 . exon 194242 195157 . - . ID=Thaps24783.2;Parent=Thaps24783;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 195254 195738 . - 0 ID=Thaps24783;Parent=Thaps24783;rank=1 chr14 . exon 195254 195738 . - . ID=Thaps24783.1;Parent=Thaps24783;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 197127 199299 . - . ID=Thaps24784;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC45];external_name=Thaps24784;logic_name=jgi_thaps3 chr14 ensembl transcript 197127 199299 . - . ID=Thaps24784;Parent=Thaps24784;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 197127 197807 . - 0 ID=Thaps24784;Parent=Thaps24784;rank=2 chr14 . exon 197127 197807 . - . ID=Thaps24784.2;Parent=Thaps24784;constitutive=1;rank=2 chr14 . CDS 197887 199299 . - 0 ID=Thaps24784;Parent=Thaps24784;rank=1 chr14 . exon 197887 199299 . - . ID=Thaps24784.1;Parent=Thaps24784;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 189795 190506 . + . ID=Thaps9724;biotype=protein_coding;description=Sig3-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC41];external_name=SIG3;logic_name=jgi_thaps3 chr14 ensembl transcript 189795 190506 . + . ID=Thaps9724;Parent=Thaps9724;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 189795 189894 . + 0 ID=Thaps9724;Parent=Thaps9724;rank=1 chr14 . exon 189795 189894 . + . ID=Thaps9724.1;Parent=Thaps9724;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 189971 190506 . + 0 ID=Thaps9724;Parent=Thaps9724;rank=2 chr14 . exon 189971 190506 . + . ID=Thaps9724.2;Parent=Thaps9724;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 191159 194169 . + . ID=Thaps9725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC42];external_name=Thaps9725;logic_name=jgi_thaps3 chr14 ensembl transcript 191159 194169 . + . ID=Thaps9725;Parent=Thaps9725;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 191159 194110 . + 0 ID=Thaps9725;Parent=Thaps9725;rank=1 chr14 . exon 191159 194110 . + . ID=Thaps9725.1;Parent=Thaps9725;constitutive=1;rank=1 chr14 . CDS 194143 194169 . + 0 ID=Thaps9725;Parent=Thaps9725;rank=2 chr14 . exon 194143 194169 . + . ID=Thaps9725.2;Parent=Thaps9725;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 196157 196783 . + . ID=Thaps9727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC44];external_name=Thaps9727;logic_name=jgi_thaps3 chr14 ensembl transcript 196157 196783 . + . ID=Thaps9727;Parent=Thaps9727;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 196157 196783 . + 0 ID=Thaps9727;Parent=Thaps9727;rank=1 chr14 . exon 196157 196783 . + . ID=Thaps9727.1;Parent=Thaps9727;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 199724 201462 . - . ID=Thaps9729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC46];external_name=Thaps9729;logic_name=jgi_thaps3 chr14 ensembl transcript 199724 201462 . - . ID=Thaps9729;Parent=Thaps9729;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 199724 200960 . - 0 ID=Thaps9729;Parent=Thaps9729;rank=3 chr14 . exon 199724 200960 . - . ID=Thaps9729.3;Parent=Thaps9729;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 201050 201215 . - 0 ID=Thaps9729;Parent=Thaps9729;rank=2 chr14 . CDS 201327 201462 . - 0 ID=Thaps9729;Parent=Thaps9729;rank=1 chr14 ensembl protein_coding_gene 202488 205068 . - . ID=Thaps24785;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC48];external_name=Thaps24785;logic_name=jgi_thaps3 chr14 ensembl transcript 202488 205068 . - . ID=Thaps24785;Parent=Thaps24785;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 202488 202669 . - 0 ID=Thaps24785;Parent=Thaps24785;rank=4 chr14 . exon 202488 202669 . - . ID=Thaps24785.4;Parent=Thaps24785;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 202755 203428 . - 0 ID=Thaps24785;Parent=Thaps24785;rank=3 chr14 . exon 202755 203428 . - . ID=Thaps24785.3;Parent=Thaps24785;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 203567 204105 . - 0 ID=Thaps24785;Parent=Thaps24785;rank=2 chr14 . exon 203567 204105 . - . ID=Thaps24785.2;Parent=Thaps24785;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 204199 205068 . - 0 ID=Thaps24785;Parent=Thaps24785;rank=1 chr14 . exon 204199 205068 . - . ID=Thaps24785.1;Parent=Thaps24785;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 205841 212285 . + . ID=Thaps24786;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC49];external_name=Thaps24786;logic_name=jgi_thaps3 chr14 ensembl transcript 205841 212285 . + . ID=Thaps24786;Parent=Thaps24786;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 205841 206303 . + 0 ID=Thaps24786;Parent=Thaps24786;rank=1 chr14 . exon 205841 206303 . + . ID=Thaps24786.1;Parent=Thaps24786;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 206504 206995 . + 0 ID=Thaps24786;Parent=Thaps24786;rank=2 chr14 . exon 206504 206995 . + . ID=Thaps24786.2;Parent=Thaps24786;constitutive=1;rank=2 chr14 . CDS 207090 207500 . + 0 ID=Thaps24786;Parent=Thaps24786;rank=3 chr14 . exon 207090 207500 . + . ID=Thaps24786.3;Parent=Thaps24786;constitutive=1;rank=3 chr14 . CDS 207577 210768 . + 0 ID=Thaps24786;Parent=Thaps24786;rank=4 chr14 . exon 207577 210768 . + . ID=Thaps24786.4;Parent=Thaps24786;constitutive=1;rank=4 chr14 . CDS 210862 212285 . + 0 ID=Thaps24786;Parent=Thaps24786;rank=5 chr14 . exon 201050 201215 . - . ID=Thaps9729.2;Parent=Thaps9729;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . exon 201327 201462 . - . ID=Thaps9729.1;Parent=Thaps9729;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 201854 202379 . + . ID=Thaps9730;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC47];external_name=Thaps9730;logic_name=jgi_thaps3 chr14 ensembl transcript 201854 202379 . + . ID=Thaps9730;Parent=Thaps9730;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 201854 201972 . + 0 ID=Thaps9730;Parent=Thaps9730;rank=1 chr14 . exon 201854 201972 . + . ID=Thaps9730.1;Parent=Thaps9730;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 202106 202379 . + 0 ID=Thaps9730;Parent=Thaps9730;rank=2 chr14 . exon 202106 202379 . + . ID=Thaps9730.2;Parent=Thaps9730;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . exon 210862 212285 . + . ID=Thaps24786.5;Parent=Thaps24786;constitutive=1;ensembl_end_phase=2;rank=5 chr14 ensembl protein_coding_gene 218211 221302 . - . ID=Thaps269735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC50];external_name=Thaps269735;logic_name=jgi_thaps3 chr14 ensembl transcript 218211 221302 . - . ID=Thaps269735;Parent=Thaps269735;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 218211 218994 . - 0 ID=Thaps269735;Parent=Thaps269735;rank=3 chr14 . exon 218211 218994 . - . ID=Thaps269735.3;Parent=Thaps269735;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 219118 219548 . - 0 ID=Thaps269735;Parent=Thaps269735;rank=2 chr14 . exon 219118 219548 . - . ID=Thaps269735.2;Parent=Thaps269735;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 219644 221302 . - 0 ID=Thaps269735;Parent=Thaps269735;rank=1 chr14 . exon 219644 221302 . - . ID=Thaps269735.1;Parent=Thaps269735;constitutive=1;rank=1 chr14 . repeat_region 223369 223397 . ? . description=dust chr14 . repeat_region 223376 223397 . ? . description=trf chr14 ensembl protein_coding_gene 221384 222505 . - . ID=Thaps15537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC51];external_name=Thaps15537;logic_name=jgi_thaps3 chr14 ensembl transcript 221384 222505 . - . ID=Thaps15537;Parent=Thaps15537;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 221384 222189 . - 0 ID=Thaps15537;Parent=Thaps15537;rank=3 chr14 . exon 221384 222189 . - . ID=Thaps15537.3;Parent=Thaps15537;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 222229 222256 . - 0 ID=Thaps15537;Parent=Thaps15537;rank=2 chr14 . exon 222229 222256 . - . ID=Thaps15537.2;Parent=Thaps15537;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 222365 222505 . - 0 ID=Thaps15537;Parent=Thaps15537;rank=1 chr14 . exon 222365 222505 . - . ID=Thaps15537.1;Parent=Thaps15537;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 228798 230066 . - . ID=Thaps24790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC54];external_name=Thaps24790;logic_name=jgi_thaps3 chr14 ensembl transcript 228798 230066 . - . ID=Thaps24790;Parent=Thaps24790;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 228798 229071 . - 0 ID=Thaps24790;Parent=Thaps24790;rank=3 chr14 . exon 228798 229071 . - . ID=Thaps24790.3;Parent=Thaps24790;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 229187 229665 . - 0 ID=Thaps24790;Parent=Thaps24790;rank=2 chr14 . exon 229187 229665 . - . ID=Thaps24790.2;Parent=Thaps24790;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 229842 230066 . - 0 ID=Thaps24790;Parent=Thaps24790;rank=1 chr14 ensembl protein_coding_gene 227363 228078 . + . ID=Thaps29950;biotype=protein_coding;description=Histone H3 [Source:UniProtKB/TrEMBL%3BAcc:B8CC53];external_name=Thaps29950;logic_name=jgi_thaps3 chr14 ensembl transcript 227363 228078 . + . ID=Thaps29950;Parent=Thaps29950;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 227363 227422 . + 0 ID=Thaps29950;Parent=Thaps29950;rank=1 chr14 . exon 227363 227422 . + . ID=Thaps29950.1;Parent=Thaps29950;constitutive=1;rank=1 chr14 . CDS 227620 227631 . + 0 ID=Thaps29950;Parent=Thaps29950;rank=2 chr14 . exon 227620 227631 . + . ID=Thaps29950.2;Parent=Thaps29950;constitutive=1;rank=2 chr14 . CDS 227740 228078 . + 0 ID=Thaps29950;Parent=Thaps29950;rank=3 chr14 . exon 227740 228078 . + . ID=Thaps29950.3;Parent=Thaps29950;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 223721 225944 . + . ID=Thaps42326;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC52];external_name=Thaps42326;logic_name=jgi_thaps3 chr14 ensembl transcript 223721 225944 . + . ID=Thaps42326;Parent=Thaps42326;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 223721 223813 . + 0 ID=Thaps42326;Parent=Thaps42326;rank=1 chr14 . exon 223721 223813 . + . ID=Thaps42326.1;Parent=Thaps42326;constitutive=1;rank=1 chr14 . CDS 223955 224782 . + 0 ID=Thaps42326;Parent=Thaps42326;rank=2 chr14 . exon 223955 224782 . + . ID=Thaps42326.2;Parent=Thaps42326;constitutive=1;rank=2 chr14 . CDS 224870 224978 . + 0 ID=Thaps42326;Parent=Thaps42326;rank=3 chr14 . exon 224870 224978 . + . ID=Thaps42326.3;Parent=Thaps42326;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 225054 225301 . + 0 ID=Thaps42326;Parent=Thaps42326;rank=4 chr14 . exon 225054 225301 . + . ID=Thaps42326.4;Parent=Thaps42326;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 225396 225944 . + 0 ID=Thaps42326;Parent=Thaps42326;rank=5 chr14 . exon 225396 225944 . + . ID=Thaps42326.5;Parent=Thaps42326;constitutive=1;rank=5 chr14 . exon 229842 230066 . - . ID=Thaps24790.1;Parent=Thaps24790;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 234638 235592 . + . ID=Thaps24791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC56];external_name=Thaps24791;logic_name=jgi_thaps3 chr14 ensembl transcript 234638 235592 . + . ID=Thaps24791;Parent=Thaps24791;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 234638 234808 . + 0 ID=Thaps24791;Parent=Thaps24791;rank=1 chr14 . exon 234638 234808 . + . ID=Thaps24791.1;Parent=Thaps24791;constitutive=1;rank=1 chr14 . CDS 234894 235592 . + 0 ID=Thaps24791;Parent=Thaps24791;rank=2 chr14 . exon 234894 235592 . + . ID=Thaps24791.2;Parent=Thaps24791;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 235875 238667 . - . ID=Thaps24792;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC57];external_name=Thaps24792;logic_name=jgi_thaps3 chr14 ensembl transcript 235875 238667 . - . ID=Thaps24792;Parent=Thaps24792;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 235875 237041 . - 0 ID=Thaps24792;Parent=Thaps24792;rank=6 chr14 . exon 235875 237041 . - . ID=Thaps24792.6;Parent=Thaps24792;constitutive=1;rank=6 chr14 . CDS 237226 237240 . - 0 ID=Thaps24792;Parent=Thaps24792;rank=5 chr14 . exon 237226 237240 . - . ID=Thaps24792.5;Parent=Thaps24792;constitutive=1;rank=5 chr14 . CDS 237330 237501 . - 0 ID=Thaps24792;Parent=Thaps24792;rank=4 chr14 . exon 237330 237501 . - . ID=Thaps24792.4;Parent=Thaps24792;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 237630 237874 . - 0 ID=Thaps24792;Parent=Thaps24792;rank=3 chr14 . exon 237630 237874 . - . ID=Thaps24792.3;Parent=Thaps24792;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 238022 238364 . - 0 ID=Thaps24792;Parent=Thaps24792;rank=2 chr14 . exon 238022 238364 . - . ID=Thaps24792.2;Parent=Thaps24792;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 238486 238667 . - 0 ID=Thaps24792;Parent=Thaps24792;rank=1 chr14 . exon 238486 238667 . - . ID=Thaps24792.1;Parent=Thaps24792;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 239418 243200 . + . ID=Thaps264129;biotype=protein_coding;description=Metalloprotease [Source:UniProtKB/TrEMBL%3BAcc:B8CC58];external_name=Thaps264129;logic_name=jgi_thaps3 chr14 ensembl transcript 239418 243200 . + . ID=Thaps264129;Parent=Thaps264129;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 239418 239536 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=1 chr14 . exon 239418 239536 . + . ID=Thaps264129.1;Parent=Thaps264129;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 239612 239700 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=2 chr14 . exon 239612 239700 . + . ID=Thaps264129.2;Parent=Thaps264129;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 239832 239950 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=3 chr14 . CDS 240100 240225 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=4 chr14 . CDS 240256 240569 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=5 chr14 . CDS 240656 241741 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=6 chr14 . CDS 241821 242262 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=7 chr14 . CDS 242346 242441 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=8 chr14 . CDS 242476 242501 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=9 chr14 . CDS 242531 242679 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=10 chr14 . CDS 242759 242930 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=11 chr14 . CDS 242946 243200 . + 0 ID=Thaps264129;Parent=Thaps264129;rank=12 chr14 ensembl protein_coding_gene 232378 232857 . - . ID=Thaps9737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC55];external_name=Thaps9737;logic_name=jgi_thaps3 chr14 ensembl transcript 232378 232857 . - . ID=Thaps9737;Parent=Thaps9737;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 232378 232857 . - 0 ID=Thaps9737;Parent=Thaps9737;rank=1 chr14 . exon 232378 232857 . - . ID=Thaps9737.1;Parent=Thaps9737;constitutive=1;rank=1 chr14 . repeat_region 249525 249533 . ? . description=dust chr14 ensembl protein_coding_gene 249614 251095 . - . ID=Thaps24793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC62];external_name=Thaps24793;logic_name=jgi_thaps3 chr14 ensembl transcript 249614 251095 . - . ID=Thaps24793;Parent=Thaps24793;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 249614 251095 . - 0 ID=Thaps24793;Parent=Thaps24793;rank=1 chr14 . exon 249614 251095 . - . ID=Thaps24793.1;Parent=Thaps24793;constitutive=1;rank=1 chr14 . exon 239832 239950 . + . ID=Thaps264129.3;Parent=Thaps264129;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . exon 240100 240225 . + . ID=Thaps264129.4;Parent=Thaps264129;constitutive=1;rank=4 chr14 . exon 240256 240569 . + . ID=Thaps264129.5;Parent=Thaps264129;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . exon 240656 241741 . + . ID=Thaps264129.6;Parent=Thaps264129;constitutive=1;rank=6 chr14 . exon 241821 242262 . + . ID=Thaps264129.7;Parent=Thaps264129;constitutive=1;ensembl_end_phase=1;rank=7 chr14 . exon 242346 242441 . + . ID=Thaps264129.8;Parent=Thaps264129;constitutive=1;rank=8 chr14 . exon 242476 242501 . + . ID=Thaps264129.9;Parent=Thaps264129;constitutive=1;ensembl_end_phase=2;rank=9 chr14 . exon 242531 242679 . + . ID=Thaps264129.10;Parent=Thaps264129;constitutive=1;ensembl_end_phase=2;rank=10 chr14 . exon 242759 242930 . + . ID=Thaps264129.11;Parent=Thaps264129;constitutive=1;ensembl_end_phase=1;rank=11 chr14 . exon 242946 243200 . + . ID=Thaps264129.12;Parent=Thaps264129;constitutive=1;rank=12 chr14 ensembl protein_coding_gene 243465 243653 . - . ID=Thaps42332;biotype=protein_coding;description=RS29%2C ribosomal protein 29 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CC59];external_name=RS29;logic_name=jgi_thaps3 chr14 ensembl transcript 243465 243653 . - . ID=Thaps42332;Parent=Thaps42332;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 243465 243653 . - 0 ID=Thaps42332;Parent=Thaps42332;rank=1 chr14 . exon 243465 243653 . - . ID=Thaps42332.1;Parent=Thaps42332;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 245444 247232 . - . ID=Thaps9741;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC60];external_name=Thaps9741;logic_name=jgi_thaps3 chr14 ensembl transcript 245444 247232 . - . ID=Thaps9741;Parent=Thaps9741;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 245444 245487 . - 0 ID=Thaps9741;Parent=Thaps9741;rank=5 chr14 . exon 245444 245487 . - . ID=Thaps9741.5;Parent=Thaps9741;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 245599 246422 . - 0 ID=Thaps9741;Parent=Thaps9741;rank=4 chr14 . exon 245599 246422 . - . ID=Thaps9741.4;Parent=Thaps9741;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 246511 246972 . - 0 ID=Thaps9741;Parent=Thaps9741;rank=3 chr14 . exon 246511 246972 . - . ID=Thaps9741.3;Parent=Thaps9741;constitutive=1;rank=3 chr14 . CDS 247056 247086 . - 0 ID=Thaps9741;Parent=Thaps9741;rank=2 chr14 . exon 247056 247086 . - . ID=Thaps9741.2;Parent=Thaps9741;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 247202 247232 . - 0 ID=Thaps9741;Parent=Thaps9741;rank=1 chr14 . exon 247202 247232 . - . ID=Thaps9741.1;Parent=Thaps9741;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 247766 248707 . - . ID=Thaps9742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC61];external_name=Thaps9742;logic_name=jgi_thaps3 chr14 ensembl transcript 247766 248707 . - . ID=Thaps9742;Parent=Thaps9742;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 247766 248707 . - 0 ID=Thaps9742;Parent=Thaps9742;rank=1 chr14 . exon 247766 248707 . - . ID=Thaps9742.1;Parent=Thaps9742;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 254012 256251 . - . ID=Thaps24795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC63];external_name=Thaps24795;logic_name=jgi_thaps3 chr14 ensembl transcript 254012 256251 . - . ID=Thaps24795;Parent=Thaps24795;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 254012 255966 . - 0 ID=Thaps24795;Parent=Thaps24795;rank=2 chr14 . exon 254012 255966 . - . ID=Thaps24795.2;Parent=Thaps24795;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 256050 256251 . - 0 ID=Thaps24795;Parent=Thaps24795;rank=1 chr14 . exon 256050 256251 . - . ID=Thaps24795.1;Parent=Thaps24795;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 259102 263809 . + . ID=Thaps24796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC66];external_name=Thaps24796;logic_name=jgi_thaps3 chr14 ensembl transcript 259102 263809 . + . ID=Thaps24796;Parent=Thaps24796;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 259102 260393 . + 0 ID=Thaps24796;Parent=Thaps24796;rank=1 chr14 . exon 259102 260393 . + . ID=Thaps24796.1;Parent=Thaps24796;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 260479 261737 . + 0 ID=Thaps24796;Parent=Thaps24796;rank=2 chr14 . CDS 261809 263034 . + 0 ID=Thaps24796;Parent=Thaps24796;rank=3 chr14 . CDS 263114 263809 . + 0 ID=Thaps24796;Parent=Thaps24796;rank=4 chr14 ensembl protein_coding_gene 256595 257336 . + . ID=Thaps9746;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC64];external_name=Thaps9746;logic_name=jgi_thaps3 chr14 ensembl transcript 256595 257336 . + . ID=Thaps9746;Parent=Thaps9746;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 256595 256893 . + 0 ID=Thaps9746;Parent=Thaps9746;rank=1 chr14 . exon 256595 256893 . + . ID=Thaps9746.1;Parent=Thaps9746;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 257117 257336 . + 0 ID=Thaps9746;Parent=Thaps9746;rank=2 chr14 . exon 257117 257336 . + . ID=Thaps9746.2;Parent=Thaps9746;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 257552 258523 . - . ID=Thaps9747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC65];external_name=Thaps9747;logic_name=jgi_thaps3 chr14 ensembl transcript 257552 258523 . - . ID=Thaps9747;Parent=Thaps9747;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 257552 258130 . - 0 ID=Thaps9747;Parent=Thaps9747;rank=3 chr14 . exon 257552 258130 . - . ID=Thaps9747.3;Parent=Thaps9747;constitutive=1;rank=3 chr14 . CDS 258220 258390 . - 0 ID=Thaps9747;Parent=Thaps9747;rank=2 chr14 . exon 258220 258390 . - . ID=Thaps9747.2;Parent=Thaps9747;constitutive=1;rank=2 chr14 . CDS 258488 258523 . - 0 ID=Thaps9747;Parent=Thaps9747;rank=1 chr14 . exon 258488 258523 . - . ID=Thaps9747.1;Parent=Thaps9747;constitutive=1;rank=1 chr14 . repeat_region 268563 268614 . ? . description=dust chr14 . repeat_region 268574 268601 . ? . description=trf chr14 . repeat_region 268574 268604 . ? . description=trf chr14 . repeat_region 268879 268914 . ? . description=trf chr14 . exon 260479 261737 . + . ID=Thaps24796.2;Parent=Thaps24796;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . exon 261809 263034 . + . ID=Thaps24796.3;Parent=Thaps24796;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . exon 263114 263809 . + . ID=Thaps24796.4;Parent=Thaps24796;constitutive=1;rank=4 chr14 ensembl protein_coding_gene 265838 268556 . - . ID=Thaps24797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC68];external_name=Thaps24797;logic_name=jgi_thaps3 chr14 ensembl transcript 265838 268556 . - . ID=Thaps24797;Parent=Thaps24797;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 265838 266332 . - 0 ID=Thaps24797;Parent=Thaps24797;rank=3 chr14 . exon 265838 266332 . - . ID=Thaps24797.3;Parent=Thaps24797;constitutive=1;rank=3 chr14 . CDS 266409 267602 . - 0 ID=Thaps24797;Parent=Thaps24797;rank=2 chr14 . exon 266409 267602 . - . ID=Thaps24797.2;Parent=Thaps24797;constitutive=1;rank=2 chr14 . CDS 267777 268556 . - 0 ID=Thaps24797;Parent=Thaps24797;rank=1 chr14 . exon 267777 268556 . - . ID=Thaps24797.1;Parent=Thaps24797;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 269185 269841 . - . ID=Thaps29955;biotype=protein_coding;description=RS5%2C ribosomal protein 5 [Source:UniProtKB/TrEMBL%3BAcc:B8CC69];external_name=RS5;logic_name=jgi_thaps3 chr14 ensembl transcript 269185 269841 . - . ID=Thaps29955;Parent=Thaps29955;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 269185 269841 . - 0 ID=Thaps29955;Parent=Thaps29955;rank=1 chr14 . exon 269185 269841 . - . ID=Thaps29955.1;Parent=Thaps29955;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 263883 264485 . - . ID=Thaps9749;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC67];external_name=Thaps9749;logic_name=jgi_thaps3 chr14 ensembl transcript 263883 264485 . - . ID=Thaps9749;Parent=Thaps9749;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 263883 264485 . - 0 ID=Thaps9749;Parent=Thaps9749;rank=1 chr14 . exon 263883 264485 . - . ID=Thaps9749.1;Parent=Thaps9749;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 273259 273801 . - . ID=Thaps18662;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC71];external_name=Thaps18662;logic_name=jgi_thaps3 chr14 ensembl transcript 273259 273801 . - . ID=Thaps18662;Parent=Thaps18662;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 273259 273801 . - 0 ID=Thaps18662;Parent=Thaps18662;rank=1 chr14 . exon 273259 273801 . - . ID=Thaps18662.1;Parent=Thaps18662;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 274075 274308 . - . ID=Thaps37258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC72];external_name=Thaps37258;logic_name=jgi_thaps3 chr14 ensembl transcript 274075 274308 . - . ID=Thaps37258;Parent=Thaps37258;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 274075 274308 . - 0 ID=Thaps37258;Parent=Thaps37258;rank=1 chr14 . exon 274075 274308 . - . ID=Thaps37258.1;Parent=Thaps37258;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 279274 279843 . - . ID=Thaps37377;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC74];external_name=Thaps37377;logic_name=jgi_thaps3 chr14 ensembl transcript 279274 279843 . - . ID=Thaps37377;Parent=Thaps37377;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 279274 279843 . - 0 ID=Thaps37377;Parent=Thaps37377;rank=1 chr14 . exon 279274 279843 . - . ID=Thaps37377.1;Parent=Thaps37377;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 271607 273070 . + . ID=Thaps9752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC70];external_name=Thaps9752;logic_name=jgi_thaps3 chr14 ensembl transcript 271607 273070 . + . ID=Thaps9752;Parent=Thaps9752;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 271607 273070 . + 0 ID=Thaps9752;Parent=Thaps9752;rank=1 chr14 . exon 271607 273070 . + . ID=Thaps9752.1;Parent=Thaps9752;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 275486 278803 . + . ID=Thaps9754;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC73];external_name=Thaps9754;logic_name=jgi_thaps3 chr14 ensembl transcript 275486 278803 . + . ID=Thaps9754;Parent=Thaps9754;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 275486 276874 . + 0 ID=Thaps9754;Parent=Thaps9754;rank=1 chr14 . exon 275486 276874 . + . ID=Thaps9754.1;Parent=Thaps9754;constitutive=1;rank=1 chr14 . CDS 276967 277169 . + 0 ID=Thaps9754;Parent=Thaps9754;rank=2 chr14 . exon 276967 277169 . + . ID=Thaps9754.2;Parent=Thaps9754;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 277241 278413 . + 0 ID=Thaps9754;Parent=Thaps9754;rank=3 chr14 . exon 277241 278413 . + . ID=Thaps9754.3;Parent=Thaps9754;constitutive=1;rank=3 chr14 . CDS 278590 278803 . + 0 ID=Thaps9754;Parent=Thaps9754;rank=4 chr14 . exon 278590 278803 . + . ID=Thaps9754.4;Parent=Thaps9754;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . repeat_region 288113 288183 . ? . description=dust chr14 ensembl protein_coding_gene 284765 285942 . + . ID=Thaps24801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC77];external_name=Thaps24801;logic_name=jgi_thaps3 chr14 ensembl transcript 284765 285942 . + . ID=Thaps24801;Parent=Thaps24801;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 284765 284823 . + 0 ID=Thaps24801;Parent=Thaps24801;rank=1 chr14 . exon 284765 284823 . + . ID=Thaps24801.1;Parent=Thaps24801;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 285041 285328 . + 0 ID=Thaps24801;Parent=Thaps24801;rank=2 chr14 . exon 285041 285328 . + . ID=Thaps24801.2;Parent=Thaps24801;constitutive=1;rank=2 chr14 . CDS 285401 285646 . + 0 ID=Thaps24801;Parent=Thaps24801;rank=3 chr14 . exon 285401 285646 . + . ID=Thaps24801.3;Parent=Thaps24801;constitutive=1;rank=3 chr14 . CDS 285738 285942 . + 0 ID=Thaps24801;Parent=Thaps24801;rank=4 chr14 . exon 285738 285942 . + . ID=Thaps24801.4;Parent=Thaps24801;constitutive=1;ensembl_end_phase=1;rank=4 chr14 ensembl protein_coding_gene 287465 288758 . - . ID=Thaps264137;biotype=protein_coding;description=Heterotrimeric G protein alpha subunit 1 [Source:UniProtKB/TrEMBL%3BAcc:B8CC78];external_name=GPA2;logic_name=jgi_thaps3 chr14 ensembl transcript 287465 288758 . - . ID=Thaps264137;Parent=Thaps264137;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 287465 288110 . - 0 ID=Thaps264137;Parent=Thaps264137;rank=3 chr14 . exon 287465 288110 . - . ID=Thaps264137.3;Parent=Thaps264137;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 288255 288275 . - 0 ID=Thaps264137;Parent=Thaps264137;rank=2 chr14 . exon 288255 288275 . - . ID=Thaps264137.2;Parent=Thaps264137;constitutive=1;rank=2 chr14 . CDS 288417 288758 . - 0 ID=Thaps264137;Parent=Thaps264137;rank=1 chr14 . exon 288417 288758 . - . ID=Thaps264137.1;Parent=Thaps264137;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 282838 283977 . - . ID=Thaps269743;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC76];external_name=Thaps269743;logic_name=jgi_thaps3 chr14 ensembl transcript 282838 283977 . - . ID=Thaps269743;Parent=Thaps269743;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 282838 283047 . - 0 ID=Thaps269743;Parent=Thaps269743;rank=2 chr14 . exon 282838 283047 . - . ID=Thaps269743.2;Parent=Thaps269743;constitutive=1;rank=2 chr14 . CDS 283126 283977 . - 0 ID=Thaps269743;Parent=Thaps269743;rank=1 chr14 . exon 283126 283977 . - . ID=Thaps269743.1;Parent=Thaps269743;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 289410 292530 . + . ID=Thaps269744;biotype=protein_coding;description=Gamma subunit of tetrameric clathrin adaptor complex AP2 [Source:UniProtKB/TrEMBL%3BAcc:B8CC79];external_name=APG2;logic_name=jgi_thaps3 chr14 ensembl transcript 289410 292530 . + . ID=Thaps269744;Parent=Thaps269744;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 289410 289581 . + 0 ID=Thaps269744;Parent=Thaps269744;rank=1 chr14 . exon 289410 289581 . + . ID=Thaps269744.1;Parent=Thaps269744;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 289721 290165 . + 0 ID=Thaps269744;Parent=Thaps269744;rank=2 chr14 . CDS 290229 290637 . + 0 ID=Thaps269744;Parent=Thaps269744;rank=3 chr14 . CDS 290716 291511 . + 0 ID=Thaps269744;Parent=Thaps269744;rank=4 chr14 . CDS 291737 292530 . + 0 ID=Thaps269744;Parent=Thaps269744;rank=5 chr14 ensembl protein_coding_gene 280400 281296 . + . ID=Thaps9756;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC75];external_name=Thaps9756;logic_name=jgi_thaps3 chr14 ensembl transcript 280400 281296 . + . ID=Thaps9756;Parent=Thaps9756;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 280400 281296 . + 0 ID=Thaps9756;Parent=Thaps9756;rank=1 chr14 . exon 280400 281296 . + . ID=Thaps9756.1;Parent=Thaps9756;constitutive=1;rank=1 chr14 . repeat_region 292560 292581 . ? . description=trf chr14 . exon 289721 290165 . + . ID=Thaps269744.2;Parent=Thaps269744;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . exon 290229 290637 . + . ID=Thaps269744.3;Parent=Thaps269744;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . exon 290716 291511 . + . ID=Thaps269744.4;Parent=Thaps269744;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . exon 291737 292530 . + . ID=Thaps269744.5;Parent=Thaps269744;constitutive=1;ensembl_end_phase=2;rank=5 chr14 ensembl protein_coding_gene 295166 296570 . - . ID=Thaps37472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC81];external_name=Thaps37472;logic_name=jgi_thaps3 chr14 ensembl transcript 295166 296570 . - . ID=Thaps37472;Parent=Thaps37472;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 295166 295339 . - 0 ID=Thaps37472;Parent=Thaps37472;rank=3 chr14 . exon 295166 295339 . - . ID=Thaps37472.3;Parent=Thaps37472;constitutive=1;rank=3 chr14 . CDS 295429 296264 . - 0 ID=Thaps37472;Parent=Thaps37472;rank=2 chr14 . exon 295429 296264 . - . ID=Thaps37472.2;Parent=Thaps37472;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 296348 296570 . - 0 ID=Thaps37472;Parent=Thaps37472;rank=1 chr14 . exon 296348 296570 . - . ID=Thaps37472.1;Parent=Thaps37472;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 293048 294580 . + . ID=Thaps37509;biotype=protein_coding;description=Vacuolar proton pump D subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CC80];external_name=VAT3;logic_name=jgi_thaps3 chr14 ensembl transcript 293048 294580 . + . ID=Thaps37509;Parent=Thaps37509;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 293048 293275 . + 0 ID=Thaps37509;Parent=Thaps37509;rank=1 chr14 . exon 293048 293275 . + . ID=Thaps37509.1;Parent=Thaps37509;constitutive=1;rank=1 chr14 . CDS 293657 294580 . + 0 ID=Thaps37509;Parent=Thaps37509;rank=2 chr14 . exon 293657 294580 . + . ID=Thaps37509.2;Parent=Thaps37509;constitutive=1;rank=2 chr14 . biological_region 302787 302787 0.999 + . logic_name=eponine chr14 . repeat_region 302806 302837 . ? . description=dust chr14 . repeat_region 307258 307321 . ? . description=dust chr14 ensembl protein_coding_gene 303396 304827 . - . ID=Thaps9763;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC82];external_name=Thaps9763;logic_name=jgi_thaps3 chr14 ensembl transcript 303396 304827 . - . ID=Thaps9763;Parent=Thaps9763;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 303396 303584 . - 0 ID=Thaps9763;Parent=Thaps9763;rank=4 chr14 . exon 303396 303584 . - . ID=Thaps9763.4;Parent=Thaps9763;constitutive=1;rank=4 chr14 . CDS 303675 303848 . - 0 ID=Thaps9763;Parent=Thaps9763;rank=3 chr14 . exon 303675 303848 . - . ID=Thaps9763.3;Parent=Thaps9763;constitutive=1;rank=3 chr14 . CDS 303969 304221 . - 0 ID=Thaps9763;Parent=Thaps9763;rank=2 chr14 . exon 303969 304221 . - . ID=Thaps9763.2;Parent=Thaps9763;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 304376 304827 . - 0 ID=Thaps9763;Parent=Thaps9763;rank=1 chr14 . exon 304376 304827 . - . ID=Thaps9763.1;Parent=Thaps9763;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 306055 309789 . - . ID=Thaps9764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC83];external_name=Thaps9764;logic_name=jgi_thaps3 chr14 ensembl transcript 306055 309789 . - . ID=Thaps9764;Parent=Thaps9764;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 306055 307128 . - 0 ID=Thaps9764;Parent=Thaps9764;rank=9 chr14 . exon 306055 307128 . - . ID=Thaps9764.9;Parent=Thaps9764;constitutive=1;rank=9 chr14 . CDS 307202 307252 . - 0 ID=Thaps9764;Parent=Thaps9764;rank=8 chr14 . exon 307202 307252 . - . ID=Thaps9764.8;Parent=Thaps9764;constitutive=1;rank=8 chr14 . CDS 307367 307445 . - 0 ID=Thaps9764;Parent=Thaps9764;rank=7 chr14 . exon 307367 307445 . - . ID=Thaps9764.7;Parent=Thaps9764;constitutive=1;ensembl_end_phase=1;rank=7 chr14 . CDS 307584 307786 . - 0 ID=Thaps9764;Parent=Thaps9764;rank=6 chr14 . exon 307584 307786 . - . ID=Thaps9764.6;Parent=Thaps9764;constitutive=1;ensembl_end_phase=2;rank=6 chr14 . CDS 307874 307933 . - 0 ID=Thaps9764;Parent=Thaps9764;rank=5 chr14 . exon 307874 307933 . - . ID=Thaps9764.5;Parent=Thaps9764;constitutive=1;rank=5 chr14 . CDS 308021 308185 . - 0 ID=Thaps9764;Parent=Thaps9764;rank=4 chr14 . exon 308021 308185 . - . ID=Thaps9764.4;Parent=Thaps9764;constitutive=1;rank=4 chr14 . CDS 308279 309409 . - 0 ID=Thaps9764;Parent=Thaps9764;rank=3 chr14 . exon 308279 309409 . - . ID=Thaps9764.3;Parent=Thaps9764;constitutive=1;rank=3 chr14 . CDS 309563 309691 . - 0 ID=Thaps9764;Parent=Thaps9764;rank=2 chr14 . exon 309563 309691 . - . ID=Thaps9764.2;Parent=Thaps9764;constitutive=1;rank=2 chr14 . CDS 309739 309789 . - 0 ID=Thaps9764;Parent=Thaps9764;rank=1 chr14 . repeat_region 310992 311053 . ? . description=trf chr14 . repeat_region 311778 311843 . ? . description=trf chr14 . repeat_region 314017 314062 . ? . description=trf chr14 . repeat_region 318420 318458 . ? . description=trf chr14 . repeat_region 319022 319123 . ? . description=trf chr14 ensembl snoRNA_gene 316023 316138 . + . ID=EPrTPOG00000000095;biotype=snoRNA;description=Small nucleolar RNA SNORD15 [Source:RFAM%3BAcc:RF00067];external_name=SNORD15;logic_name=ncrna_eg chr14 ensembl snoRNA 316023 316138 . + . ID=EPrTPOT00000000095;Parent=EPrTPOG00000000095;biotype=snoRNA;logic_name=ncrna_eg chr14 . exon 316023 316138 . + . ID=EPrTPOE00000000095;Parent=EPrTPOT00000000095;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 310885 313835 . - . ID=Thaps24806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC84];external_name=Thaps24806;logic_name=jgi_thaps3 chr14 ensembl transcript 310885 313835 . - . ID=Thaps24806;Parent=Thaps24806;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 310885 311045 . - 0 ID=Thaps24806;Parent=Thaps24806;rank=2 chr14 . exon 310885 311045 . - . ID=Thaps24806.2;Parent=Thaps24806;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 311165 313835 . - 0 ID=Thaps24806;Parent=Thaps24806;rank=1 chr14 . exon 311165 313835 . - . ID=Thaps24806.1;Parent=Thaps24806;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 318542 319283 . + . ID=Thaps24808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC86];external_name=Thaps24808;logic_name=jgi_thaps3 chr14 ensembl transcript 318542 319283 . + . ID=Thaps24808;Parent=Thaps24808;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 318542 318589 . + 0 ID=Thaps24808;Parent=Thaps24808;rank=1 chr14 . exon 318542 318589 . + . ID=Thaps24808.1;Parent=Thaps24808;constitutive=1;rank=1 chr14 . CDS 318683 318781 . + 0 ID=Thaps24808;Parent=Thaps24808;rank=2 chr14 . exon 318683 318781 . + . ID=Thaps24808.2;Parent=Thaps24808;constitutive=1;rank=2 chr14 . CDS 318865 318918 . + 0 ID=Thaps24808;Parent=Thaps24808;rank=3 chr14 . exon 318865 318918 . + . ID=Thaps24808.3;Parent=Thaps24808;constitutive=1;rank=3 chr14 . CDS 319002 319283 . + 0 ID=Thaps24808;Parent=Thaps24808;rank=4 chr14 . exon 319002 319283 . + . ID=Thaps24808.4;Parent=Thaps24808;constitutive=1;rank=4 chr14 ensembl protein_coding_gene 315433 318313 . + . ID=Thaps269747;biotype=protein_coding;description=Coatomer COPII [Source:UniProtKB/TrEMBL%3BAcc:B8CC85];external_name=Thaps269747;logic_name=jgi_thaps3 chr14 ensembl transcript 315433 318313 . + . ID=Thaps269747;Parent=Thaps269747;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 315433 315920 . + 0 ID=Thaps269747;Parent=Thaps269747;rank=1 chr14 . exon 315433 315920 . + . ID=Thaps269747.1;Parent=Thaps269747;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 316249 317603 . + 0 ID=Thaps269747;Parent=Thaps269747;rank=2 chr14 . exon 316249 317603 . + . ID=Thaps269747.2;Parent=Thaps269747;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 317664 318313 . + 0 ID=Thaps269747;Parent=Thaps269747;rank=3 chr14 . exon 317664 318313 . + . ID=Thaps269747.3;Parent=Thaps269747;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . exon 309739 309789 . - . ID=Thaps9764.1;Parent=Thaps9764;constitutive=1;rank=1 chr14 . repeat_region 322167 322188 . ? . description=dust chr14 . repeat_region 322830 322877 . ? . description=dust chr14 . repeat_region 323206 323267 . ? . description=dust chr14 . repeat_region 327661 327670 . ? . description=dust chr14 ensembl protein_coding_gene 321800 324143 . + . ID=Thaps24809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC88];external_name=Thaps24809;logic_name=jgi_thaps3 chr14 ensembl transcript 321800 324143 . + . ID=Thaps24809;Parent=Thaps24809;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 321800 322180 . + 0 ID=Thaps24809;Parent=Thaps24809;rank=1 chr14 . exon 321800 322180 . + . ID=Thaps24809.1;Parent=Thaps24809;constitutive=1;rank=1 chr14 . CDS 322236 324143 . + 0 ID=Thaps24809;Parent=Thaps24809;rank=2 chr14 . exon 322236 324143 . + . ID=Thaps24809.2;Parent=Thaps24809;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 319589 321355 . - . ID=Thaps750;biotype=protein_coding;description=Vacuolar protein sorting Vps45 [Source:UniProtKB/TrEMBL%3BAcc:B8CC87];external_name=Thaps750;logic_name=jgi_thaps3 chr14 ensembl transcript 319589 321355 . - . ID=Thaps750;Parent=Thaps750;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 319589 321174 . - 0 ID=Thaps750;Parent=Thaps750;rank=2 chr14 . exon 319589 321174 . - . ID=Thaps750.2;Parent=Thaps750;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 321232 321355 . - 0 ID=Thaps750;Parent=Thaps750;rank=1 chr14 . exon 321232 321355 . - . ID=Thaps750.1;Parent=Thaps750;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 324451 326967 . + . ID=Thaps9770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC89];external_name=NTT5;logic_name=jgi_thaps3 chr14 ensembl transcript 324451 326967 . + . ID=Thaps9770;Parent=Thaps9770;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 324451 326967 . + 0 ID=Thaps9770;Parent=Thaps9770;rank=1 chr14 . exon 324451 326967 . + . ID=Thaps9770.1;Parent=Thaps9770;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 327708 328244 . + . ID=Thaps9771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC90];external_name=Thaps9771;logic_name=jgi_thaps3 chr14 ensembl transcript 327708 328244 . + . ID=Thaps9771;Parent=Thaps9771;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 327708 328244 . + 0 ID=Thaps9771;Parent=Thaps9771;rank=1 chr14 . exon 327708 328244 . + . ID=Thaps9771.1;Parent=Thaps9771;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 328419 330254 . + . ID=Thaps9772;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC91];external_name=Thaps9772;logic_name=jgi_thaps3 chr14 ensembl transcript 328419 330254 . + . ID=Thaps9772;Parent=Thaps9772;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 328419 329732 . + 0 ID=Thaps9772;Parent=Thaps9772;rank=1 chr14 . exon 328419 329732 . + . ID=Thaps9772.1;Parent=Thaps9772;constitutive=1;rank=1 chr14 . CDS 329877 330014 . + 0 ID=Thaps9772;Parent=Thaps9772;rank=2 chr14 . CDS 330096 330254 . + 0 ID=Thaps9772;Parent=Thaps9772;rank=3 chr14 . repeat_region 330343 330400 . ? . description=trf chr14 ensembl protein_coding_gene 330631 332422 . + . ID=Thaps24812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC92];external_name=Thaps24812;logic_name=jgi_thaps3 chr14 ensembl transcript 330631 332422 . + . ID=Thaps24812;Parent=Thaps24812;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 330631 330849 . + 0 ID=Thaps24812;Parent=Thaps24812;rank=1 chr14 . exon 330631 330849 . + . ID=Thaps24812.1;Parent=Thaps24812;constitutive=1;rank=1 chr14 . CDS 331331 332422 . + 0 ID=Thaps24812;Parent=Thaps24812;rank=2 chr14 . exon 331331 332422 . + . ID=Thaps24812.2;Parent=Thaps24812;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 332501 333680 . - . ID=Thaps264143;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC93];external_name=Thaps264143;logic_name=jgi_thaps3 chr14 ensembl transcript 332501 333680 . - . ID=Thaps264143;Parent=Thaps264143;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 332501 333071 . - 0 ID=Thaps264143;Parent=Thaps264143;rank=5 chr14 . exon 332501 333071 . - . ID=Thaps264143.5;Parent=Thaps264143;constitutive=1;ensembl_end_phase=1;rank=5 chr14 . CDS 333222 333390 . - 0 ID=Thaps264143;Parent=Thaps264143;rank=4 chr14 . exon 333222 333390 . - . ID=Thaps264143.4;Parent=Thaps264143;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 333484 333522 . - 0 ID=Thaps264143;Parent=Thaps264143;rank=3 chr14 . exon 333484 333522 . - . ID=Thaps264143.3;Parent=Thaps264143;constitutive=1;rank=3 chr14 . CDS 333551 333588 . - 0 ID=Thaps264143;Parent=Thaps264143;rank=2 chr14 . exon 333551 333588 . - . ID=Thaps264143.2;Parent=Thaps264143;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 333614 333680 . - 0 ID=Thaps264143;Parent=Thaps264143;rank=1 chr14 . exon 333614 333680 . - . ID=Thaps264143.1;Parent=Thaps264143;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . exon 329877 330014 . + . ID=Thaps9772.2;Parent=Thaps9772;constitutive=1;rank=2 chr14 . exon 330096 330254 . + . ID=Thaps9772.3;Parent=Thaps9772;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 336203 337804 . + . ID=Thaps9775;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC94];external_name=Thaps9775;logic_name=jgi_thaps3 chr14 ensembl transcript 336203 337804 . + . ID=Thaps9775;Parent=Thaps9775;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 336203 337804 . + 0 ID=Thaps9775;Parent=Thaps9775;rank=1 chr14 . exon 336203 337804 . + . ID=Thaps9775.1;Parent=Thaps9775;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 338133 339392 . + . ID=Thaps9776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC95];external_name=Thaps9776;logic_name=jgi_thaps3 chr14 ensembl transcript 338133 339392 . + . ID=Thaps9776;Parent=Thaps9776;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 338133 338471 . + 0 ID=Thaps9776;Parent=Thaps9776;rank=1 chr14 . exon 338133 338471 . + . ID=Thaps9776.1;Parent=Thaps9776;constitutive=1;rank=1 chr14 . CDS 338617 338928 . + 0 ID=Thaps9776;Parent=Thaps9776;rank=2 chr14 . exon 338617 338928 . + . ID=Thaps9776.2;Parent=Thaps9776;constitutive=1;rank=2 chr14 . CDS 339039 339149 . + 0 ID=Thaps9776;Parent=Thaps9776;rank=3 chr14 . exon 339039 339149 . + . ID=Thaps9776.3;Parent=Thaps9776;constitutive=1;rank=3 chr14 . CDS 339243 339392 . + 0 ID=Thaps9776;Parent=Thaps9776;rank=4 chr14 . exon 339243 339392 . + . ID=Thaps9776.4;Parent=Thaps9776;constitutive=1;rank=4 chr14 . repeat_region 346720 346746 . ? . description=dust chr14 ensembl protein_coding_gene 343166 344179 . + . ID=Thaps24813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC97];external_name=Thaps24813;logic_name=jgi_thaps3 chr14 ensembl transcript 343166 344179 . + . ID=Thaps24813;Parent=Thaps24813;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 343166 344179 . + 0 ID=Thaps24813;Parent=Thaps24813;rank=1 chr14 . exon 343166 344179 . + . ID=Thaps24813.1;Parent=Thaps24813;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 347040 349218 . + . ID=Thaps24815;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC99];external_name=Thaps24815;logic_name=jgi_thaps3 chr14 ensembl transcript 347040 349218 . + . ID=Thaps24815;Parent=Thaps24815;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 347040 347348 . + 0 ID=Thaps24815;Parent=Thaps24815;rank=1 chr14 . exon 347040 347348 . + . ID=Thaps24815.1;Parent=Thaps24815;constitutive=1;rank=1 chr14 . CDS 347436 348245 . + 0 ID=Thaps24815;Parent=Thaps24815;rank=2 chr14 . exon 347436 348245 . + . ID=Thaps24815.2;Parent=Thaps24815;constitutive=1;rank=2 chr14 . CDS 348331 348552 . + 0 ID=Thaps24815;Parent=Thaps24815;rank=3 chr14 . exon 348331 348552 . + . ID=Thaps24815.3;Parent=Thaps24815;constitutive=1;rank=3 chr14 . CDS 348633 348846 . + 0 ID=Thaps24815;Parent=Thaps24815;rank=4 chr14 . exon 348633 348846 . + . ID=Thaps24815.4;Parent=Thaps24815;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 348931 349153 . + 0 ID=Thaps24815;Parent=Thaps24815;rank=5 chr14 . exon 348931 349153 . + . ID=Thaps24815.5;Parent=Thaps24815;constitutive=1;ensembl_end_phase=1;rank=5 chr14 . CDS 349203 349218 . + 0 ID=Thaps24815;Parent=Thaps24815;rank=6 chr14 . exon 349203 349218 . + . ID=Thaps24815.6;Parent=Thaps24815;constitutive=1;ensembl_end_phase=1;rank=6 chr14 ensembl protein_coding_gene 340718 342261 . - . ID=Thaps264144;biotype=protein_coding;description=Phosphate transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CC96];external_name=Thaps264144;logic_name=jgi_thaps3 chr14 ensembl transcript 340718 342261 . - . ID=Thaps264144;Parent=Thaps264144;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 340718 340950 . - 0 ID=Thaps264144;Parent=Thaps264144;rank=4 chr14 . exon 340718 340950 . - . ID=Thaps264144.4;Parent=Thaps264144;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 341038 341264 . - 0 ID=Thaps264144;Parent=Thaps264144;rank=3 chr14 . exon 341038 341264 . - . ID=Thaps264144.3;Parent=Thaps264144;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 341517 341919 . - 0 ID=Thaps264144;Parent=Thaps264144;rank=2 chr14 . exon 341517 341919 . - . ID=Thaps264144.2;Parent=Thaps264144;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 342043 342261 . - 0 ID=Thaps264144;Parent=Thaps264144;rank=1 chr14 . exon 342043 342261 . - . ID=Thaps264144.1;Parent=Thaps264144;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 344407 344616 . - . ID=Thaps264145;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CC98];external_name=Thaps264145;logic_name=jgi_thaps3 chr14 ensembl transcript 344407 344616 . - . ID=Thaps264145;Parent=Thaps264145;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 344407 344616 . - 0 ID=Thaps264145;Parent=Thaps264145;rank=1 chr14 . exon 344407 344616 . - . ID=Thaps264145.1;Parent=Thaps264145;constitutive=1;rank=1 chr14 . repeat_region 356408 356456 . ? . description=trf chr14 ensembl protein_coding_gene 351247 352642 . - . ID=Thaps24816;biotype=protein_coding;description=Aspartate-ammonia ligase [Source:UniProtKB/TrEMBL%3BAcc:B8CCA0];external_name=ASA;logic_name=jgi_thaps3 chr14 ensembl transcript 351247 352642 . - . ID=Thaps24816;Parent=Thaps24816;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 351247 352146 . - 0 ID=Thaps24816;Parent=Thaps24816;rank=2 chr14 . exon 351247 352146 . - . ID=Thaps24816.2;Parent=Thaps24816;constitutive=1;rank=2 chr14 . CDS 352472 352642 . - 0 ID=Thaps24816;Parent=Thaps24816;rank=1 chr14 . exon 352472 352642 . - . ID=Thaps24816.1;Parent=Thaps24816;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 353525 354650 . + . ID=Thaps37444;biotype=protein_coding;description=Sterol-c-methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CCA1];external_name=Thaps37444;logic_name=jgi_thaps3 chr14 ensembl transcript 353525 354650 . + . ID=Thaps37444;Parent=Thaps37444;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 353525 354258 . + 0 ID=Thaps37444;Parent=Thaps37444;rank=1 chr14 . exon 353525 354258 . + . ID=Thaps37444.1;Parent=Thaps37444;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 354362 354650 . + 0 ID=Thaps37444;Parent=Thaps37444;rank=2 chr14 . exon 354362 354650 . + . ID=Thaps37444.2;Parent=Thaps37444;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 354950 359321 . - . ID=Thaps42365;biotype=protein_coding;description=Chromosome condensation protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCA2];external_name=Thaps42365;logic_name=jgi_thaps3 chr14 ensembl transcript 354950 359321 . - . ID=Thaps42365;Parent=Thaps42365;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 354950 355580 . - 0 ID=Thaps42365;Parent=Thaps42365;rank=6 chr14 . exon 354950 355580 . - . ID=Thaps42365.6;Parent=Thaps42365;constitutive=1;ensembl_end_phase=1;rank=6 chr14 . CDS 355675 355787 . - 0 ID=Thaps42365;Parent=Thaps42365;rank=5 chr14 . exon 355675 355787 . - . ID=Thaps42365.5;Parent=Thaps42365;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 355881 356870 . - 0 ID=Thaps42365;Parent=Thaps42365;rank=4 chr14 . exon 355881 356870 . - . ID=Thaps42365.4;Parent=Thaps42365;constitutive=1;rank=4 chr14 . CDS 357029 357592 . - 0 ID=Thaps42365;Parent=Thaps42365;rank=3 chr14 . exon 357029 357592 . - . ID=Thaps42365.3;Parent=Thaps42365;constitutive=1;rank=3 chr14 . CDS 357701 359194 . - 0 ID=Thaps42365;Parent=Thaps42365;rank=2 chr14 . exon 357701 359194 . - . ID=Thaps42365.2;Parent=Thaps42365;constitutive=1;rank=2 chr14 . CDS 359307 359321 . - 0 ID=Thaps42365;Parent=Thaps42365;rank=1 chr14 . exon 359307 359321 . - . ID=Thaps42365.1;Parent=Thaps42365;constitutive=1;rank=1 chr14 . repeat_region 359513 359556 . ? . description=dust chr14 . repeat_region 367319 367663 . + . description=scaffold_5_455_2_1182790_1184124 chr14 ensembl protein_coding_gene 360374 364925 . + . ID=Thaps24818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCA3];external_name=Thaps24818;logic_name=jgi_thaps3 chr14 ensembl transcript 360374 364925 . + . ID=Thaps24818;Parent=Thaps24818;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 360374 361326 . + 0 ID=Thaps24818;Parent=Thaps24818;rank=1 chr14 . exon 360374 361326 . + . ID=Thaps24818.1;Parent=Thaps24818;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 361351 361382 . + 0 ID=Thaps24818;Parent=Thaps24818;rank=2 chr14 . exon 361351 361382 . + . ID=Thaps24818.2;Parent=Thaps24818;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 361465 364925 . + 0 ID=Thaps24818;Parent=Thaps24818;rank=3 chr14 . exon 361465 364925 . + . ID=Thaps24818.3;Parent=Thaps24818;constitutive=1;ensembl_end_phase=2;rank=3 chr14 ensembl protein_coding_gene 365587 365796 . - . ID=Thaps264149;biotype=protein_coding;description=RM24%2C ribosomal protein 24 mitochondrial large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CCA4];external_name=RM24;logic_name=jgi_thaps3 chr14 ensembl transcript 365587 365796 . - . ID=Thaps264149;Parent=Thaps264149;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 365587 365796 . - 0 ID=Thaps264149;Parent=Thaps264149;rank=1 chr14 . exon 365587 365796 . - . ID=Thaps264149.1;Parent=Thaps264149;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 366364 368446 . + . ID=Thaps42368;biotype=protein_coding;description=Udp-d-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8CCA5];external_name=UGDH1;logic_name=jgi_thaps3 chr14 ensembl transcript 366364 368446 . + . ID=Thaps42368;Parent=Thaps42368;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 366364 366456 . + 0 ID=Thaps42368;Parent=Thaps42368;rank=1 chr14 . exon 366364 366456 . + . ID=Thaps42368.1;Parent=Thaps42368;constitutive=1;rank=1 chr14 . CDS 367112 368446 . + 0 ID=Thaps42368;Parent=Thaps42368;rank=2 chr14 . exon 367112 368446 . + . ID=Thaps42368.2;Parent=Thaps42368;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 369102 370280 . + . ID=Thaps9787;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCA6];external_name=Thaps9787;logic_name=jgi_thaps3 chr14 ensembl transcript 369102 370280 . + . ID=Thaps9787;Parent=Thaps9787;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 369102 370280 . + 0 ID=Thaps9787;Parent=Thaps9787;rank=1 chr14 . exon 369102 370280 . + . ID=Thaps9787.1;Parent=Thaps9787;constitutive=1;rank=1 chr14 . repeat_region 373281 373318 . ? . description=trf chr14 . repeat_region 373643 373664 . ? . description=trf chr14 . biological_region 374388 374389 0.999 - . logic_name=eponine chr14 . biological_region 374429 374432 0.999 - . logic_name=eponine chr14 ensembl protein_coding_gene 370664 374629 . - . ID=Thaps24820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCA7];external_name=Thaps24820;logic_name=jgi_thaps3 chr14 ensembl transcript 370664 374629 . - . ID=Thaps24820;Parent=Thaps24820;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 370664 374629 . - 0 ID=Thaps24820;Parent=Thaps24820;rank=1 chr14 . exon 370664 374629 . - . ID=Thaps24820.1;Parent=Thaps24820;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 374832 375794 . + . ID=Thaps269752;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCA8];external_name=Thaps269752;logic_name=jgi_thaps3 chr14 ensembl transcript 374832 375794 . + . ID=Thaps269752;Parent=Thaps269752;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 374832 375207 . + 0 ID=Thaps269752;Parent=Thaps269752;rank=1 chr14 . exon 374832 375207 . + . ID=Thaps269752.1;Parent=Thaps269752;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 375307 375794 . + 0 ID=Thaps269752;Parent=Thaps269752;rank=2 chr14 . exon 375307 375794 . + . ID=Thaps269752.2;Parent=Thaps269752;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 377853 393771 . + . ID=Thaps9790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCA9];external_name=Thaps9790;logic_name=jgi_thaps3 chr14 ensembl transcript 377853 393771 . + . ID=Thaps9790;Parent=Thaps9790;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 377853 390468 . + 0 ID=Thaps9790;Parent=Thaps9790;rank=1 chr14 . exon 377853 390468 . + . ID=Thaps9790.1;Parent=Thaps9790;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 390650 393771 . + 0 ID=Thaps9790;Parent=Thaps9790;rank=2 chr14 ensembl gene 394566 396157 . + . ID=Thaps264152;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr14 ensembl transcript 394566 396157 . + . ID=Thaps264152;Parent=Thaps264152;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr14 . exon 394566 394893 . + . ID=Thaps264152.1;Parent=Thaps264152;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . exon 394912 395158 . + . ID=Thaps264152.2;Parent=Thaps264152;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . exon 395246 395456 . + . ID=Thaps264152.3;Parent=Thaps264152;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . exon 395475 396157 . + . ID=Thaps264152.4;Parent=Thaps264152;constitutive=1;ensembl_end_phase=2;rank=4 chr14 ensembl protein_coding_gene 399315 400079 . - . ID=Thaps37443;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCB2];external_name=Thaps37443;logic_name=jgi_thaps3 chr14 ensembl transcript 399315 400079 . - . ID=Thaps37443;Parent=Thaps37443;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 399315 399792 . - 0 ID=Thaps37443;Parent=Thaps37443;rank=2 chr14 . exon 399315 399792 . - . ID=Thaps37443.2;Parent=Thaps37443;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 399940 400079 . - 0 ID=Thaps37443;Parent=Thaps37443;rank=1 chr14 ensembl protein_coding_gene 377853 393771 . + . ID=Thaps9790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCA9];external_name=Thaps9790;logic_name=jgi_thaps3 chr14 ensembl transcript 377853 393771 . + . ID=Thaps9790;Parent=Thaps9790;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 377853 390468 . + 0 ID=Thaps9790;Parent=Thaps9790;rank=1 chr14 . exon 377853 390468 . + . ID=Thaps9790.1;Parent=Thaps9790;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 390650 393771 . + 0 ID=Thaps9790;Parent=Thaps9790;rank=2 chr14 . exon 390650 393771 . + . ID=Thaps9790.2;Parent=Thaps9790;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 396251 397873 . - . ID=Thaps9792;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCB0];external_name=Thaps9792;logic_name=jgi_thaps3 chr14 ensembl transcript 396251 397873 . - . ID=Thaps9792;Parent=Thaps9792;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 396251 397873 . - 0 ID=Thaps9792;Parent=Thaps9792;rank=1 chr14 . exon 396251 397873 . - . ID=Thaps9792.1;Parent=Thaps9792;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 398130 399146 . + . ID=Thaps9793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCB1];external_name=Thaps9793;logic_name=jgi_thaps3 chr14 ensembl transcript 398130 399146 . + . ID=Thaps9793;Parent=Thaps9793;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 398130 399146 . + 0 ID=Thaps9793;Parent=Thaps9793;rank=1 chr14 . exon 398130 399146 . + . ID=Thaps9793.1;Parent=Thaps9793;constitutive=1;rank=1 chr14 . repeat_region 403283 403299 . ? . description=dust chr14 . repeat_region 404097 404154 . ? . description=trf chr14 . repeat_region 404367 404421 . ? . description=dust chr14 . repeat_region 405203 405263 . ? . description=trf chr14 . repeat_region 405209 405268 . ? . description=dust chr14 ensembl protein_coding_gene 405732 407189 . + . ID=Thaps24826;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCB7];external_name=Thaps24826;logic_name=jgi_thaps3 chr14 ensembl transcript 405732 407189 . + . ID=Thaps24826;Parent=Thaps24826;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 405732 407189 . + 0 ID=Thaps24826;Parent=Thaps24826;rank=1 chr14 . exon 405732 407189 . + . ID=Thaps24826.1;Parent=Thaps24826;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 407643 414500 . + . ID=Thaps24827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCB8];external_name=Thaps24827;logic_name=jgi_thaps3 chr14 ensembl transcript 407643 414500 . + . ID=Thaps24827;Parent=Thaps24827;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 407643 409374 . + 0 ID=Thaps24827;Parent=Thaps24827;rank=1 chr14 . exon 407643 409374 . + . ID=Thaps24827.1;Parent=Thaps24827;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 409438 409498 . + 0 ID=Thaps24827;Parent=Thaps24827;rank=2 chr14 . exon 409438 409498 . + . ID=Thaps24827.2;Parent=Thaps24827;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 409596 410029 . + 0 ID=Thaps24827;Parent=Thaps24827;rank=3 chr14 . CDS 410104 413343 . + 0 ID=Thaps24827;Parent=Thaps24827;rank=4 chr14 . CDS 413422 414500 . + 0 ID=Thaps24827;Parent=Thaps24827;rank=5 chr14 ensembl protein_coding_gene 402130 402967 . + . ID=Thaps26418;biotype=protein_coding;description=Microsomal signal peptidase [Source:UniProtKB/TrEMBL%3BAcc:B8CCB4];external_name=Thaps26418;logic_name=jgi_thaps3 chr14 ensembl transcript 402130 402967 . + . ID=Thaps26418;Parent=Thaps26418;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 402130 402264 . + 0 ID=Thaps26418;Parent=Thaps26418;rank=1 chr14 . exon 402130 402264 . + . ID=Thaps26418.1;Parent=Thaps26418;constitutive=1;rank=1 chr14 . CDS 402560 402967 . + 0 ID=Thaps26418;Parent=Thaps26418;rank=2 chr14 . exon 402560 402967 . + . ID=Thaps26418.2;Parent=Thaps26418;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 403562 403969 . + . ID=Thaps37442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCB5];external_name=Thaps37442;logic_name=jgi_thaps3 chr14 ensembl transcript 403562 403969 . + . ID=Thaps37442;Parent=Thaps37442;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 403562 403969 . + 0 ID=Thaps37442;Parent=Thaps37442;rank=1 chr14 . exon 403562 403969 . + . ID=Thaps37442.1;Parent=Thaps37442;constitutive=1;rank=1 chr14 . exon 399940 400079 . - . ID=Thaps37443.1;Parent=Thaps37443;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 404595 405014 . - . ID=Thaps42380;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCB6];external_name=Thaps42380;logic_name=jgi_thaps3 chr14 ensembl transcript 404595 405014 . - . ID=Thaps42380;Parent=Thaps42380;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 404595 405014 . - 0 ID=Thaps42380;Parent=Thaps42380;rank=1 chr14 . exon 404595 405014 . - . ID=Thaps42380.1;Parent=Thaps42380;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 400387 401775 . + . ID=Thaps9795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCB3];external_name=Thaps9795;logic_name=jgi_thaps3 chr14 ensembl transcript 400387 401775 . + . ID=Thaps9795;Parent=Thaps9795;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 400387 401775 . + 0 ID=Thaps9795;Parent=Thaps9795;rank=1 chr14 . exon 400387 401775 . + . ID=Thaps9795.1;Parent=Thaps9795;constitutive=1;rank=1 chr14 . exon 409596 410029 . + . ID=Thaps24827.3;Parent=Thaps24827;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . exon 410104 413343 . + . ID=Thaps24827.4;Parent=Thaps24827;constitutive=1;rank=4 chr14 . exon 413422 414500 . + . ID=Thaps24827.5;Parent=Thaps24827;constitutive=1;ensembl_end_phase=2;rank=5 chr14 ensembl protein_coding_gene 414555 419153 . - . ID=Thaps24828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCB9];external_name=Thaps24828;logic_name=jgi_thaps3 chr14 ensembl transcript 414555 419153 . - . ID=Thaps24828;Parent=Thaps24828;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 414555 419153 . - 0 ID=Thaps24828;Parent=Thaps24828;rank=1 chr14 . exon 414555 419153 . - . ID=Thaps24828.1;Parent=Thaps24828;constitutive=1;rank=1 chr14 . repeat_region 423138 423167 . ? . description=dust chr14 . repeat_region 423140 423167 . ? . description=trf chr14 . repeat_region 426036 426086 . ? . description=dust chr14 . repeat_region 426055 426085 . ? . description=trf chr14 . repeat_region 426348 426380 . ? . description=trf chr14 . repeat_region 426807 426825 . ? . description=dust chr14 ensembl protein_coding_gene 419669 422893 . - . ID=Thaps24829;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCC0];external_name=Thaps24829;logic_name=jgi_thaps3 chr14 ensembl transcript 419669 422893 . - . ID=Thaps24829;Parent=Thaps24829;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 419669 422893 . - 0 ID=Thaps24829;Parent=Thaps24829;rank=1 chr14 . exon 419669 422893 . - . ID=Thaps24829.1;Parent=Thaps24829;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 428192 429746 . + . ID=Thaps24830;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCC3];external_name=Thaps24830;logic_name=jgi_thaps3 chr14 ensembl transcript 428192 429746 . + . ID=Thaps24830;Parent=Thaps24830;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 428192 428792 . + 0 ID=Thaps24830;Parent=Thaps24830;rank=1 chr14 . exon 428192 428792 . + . ID=Thaps24830.1;Parent=Thaps24830;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 428899 429746 . + 0 ID=Thaps24830;Parent=Thaps24830;rank=2 chr14 . exon 428899 429746 . + . ID=Thaps24830.2;Parent=Thaps24830;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 423279 424381 . + . ID=Thaps9803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCC1];external_name=Thaps9803;logic_name=jgi_thaps3 chr14 ensembl transcript 423279 424381 . + . ID=Thaps9803;Parent=Thaps9803;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 423279 423601 . + 0 ID=Thaps9803;Parent=Thaps9803;rank=1 chr14 . exon 423279 423601 . + . ID=Thaps9803.1;Parent=Thaps9803;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 423721 424381 . + 0 ID=Thaps9803;Parent=Thaps9803;rank=2 chr14 . exon 423721 424381 . + . ID=Thaps9803.2;Parent=Thaps9803;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 424472 427447 . - . ID=Thaps9804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCC2];external_name=Thaps9804;logic_name=jgi_thaps3 chr14 ensembl transcript 424472 427447 . - . ID=Thaps9804;Parent=Thaps9804;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 424472 424745 . - 0 ID=Thaps9804;Parent=Thaps9804;rank=2 chr14 . exon 424472 424745 . - . ID=Thaps9804.2;Parent=Thaps9804;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 424842 427447 . - 0 ID=Thaps9804;Parent=Thaps9804;rank=1 chr14 . exon 424842 427447 . - . ID=Thaps9804.1;Parent=Thaps9804;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . repeat_region 430089 430346 . - . description=Harbinger2N_TP chr14 ensembl protein_coding_gene 435459 436806 . - . ID=Thaps30004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCC5];external_name=Thaps30004;logic_name=jgi_thaps3 chr14 ensembl transcript 435459 436806 . - . ID=Thaps30004;Parent=Thaps30004;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 435459 436392 . - 0 ID=Thaps30004;Parent=Thaps30004;rank=2 chr14 . exon 435459 436392 . - . ID=Thaps30004.2;Parent=Thaps30004;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 436481 436806 . - 0 ID=Thaps30004;Parent=Thaps30004;rank=1 chr14 . exon 436481 436806 . - . ID=Thaps30004.1;Parent=Thaps30004;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 437589 439049 . + . ID=Thaps37288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCC6];external_name=Thaps37288;logic_name=jgi_thaps3 chr14 ensembl transcript 437589 439049 . + . ID=Thaps37288;Parent=Thaps37288;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 437589 439049 . + 0 ID=Thaps37288;Parent=Thaps37288;rank=1 chr14 . exon 437589 439049 . + . ID=Thaps37288.1;Parent=Thaps37288;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 430537 431550 . + . ID=Thaps9806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCC4];external_name=Thaps9806;logic_name=jgi_thaps3 chr14 ensembl transcript 430537 431550 . + . ID=Thaps9806;Parent=Thaps9806;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 430537 431550 . + 0 ID=Thaps9806;Parent=Thaps9806;rank=1 chr14 . exon 430537 431550 . + . ID=Thaps9806.1;Parent=Thaps9806;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 442090 443316 . + . ID=Thaps24834;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCC8];external_name=Thaps24834;logic_name=jgi_thaps3 chr14 ensembl transcript 442090 443316 . + . ID=Thaps24834;Parent=Thaps24834;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 442090 443316 . + 0 ID=Thaps24834;Parent=Thaps24834;rank=1 chr14 . exon 442090 443316 . + . ID=Thaps24834.1;Parent=Thaps24834;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 444631 447994 . + . ID=Thaps24835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCC9];external_name=Thaps24835;logic_name=jgi_thaps3 chr14 ensembl transcript 444631 447994 . + . ID=Thaps24835;Parent=Thaps24835;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 444631 447784 . + 0 ID=Thaps24835;Parent=Thaps24835;rank=1 chr14 . exon 444631 447784 . + . ID=Thaps24835.1;Parent=Thaps24835;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 447876 447994 . + 0 ID=Thaps24835;Parent=Thaps24835;rank=2 chr14 . exon 447876 447994 . + . ID=Thaps24835.2;Parent=Thaps24835;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 448306 448832 . - . ID=Thaps264157;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCD0];external_name=Thaps264157;logic_name=jgi_thaps3 chr14 ensembl transcript 448306 448832 . - . ID=Thaps264157;Parent=Thaps264157;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 448306 448380 . - 0 ID=Thaps264157;Parent=Thaps264157;rank=3 chr14 . exon 448306 448380 . - . ID=Thaps264157.3;Parent=Thaps264157;constitutive=1;rank=3 chr14 . CDS 448465 448669 . - 0 ID=Thaps264157;Parent=Thaps264157;rank=2 chr14 . exon 448465 448669 . - . ID=Thaps264157.2;Parent=Thaps264157;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 448715 448832 . - 0 ID=Thaps264157;Parent=Thaps264157;rank=1 chr14 . exon 448715 448832 . - . ID=Thaps264157.1;Parent=Thaps264157;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 449363 450157 . + . ID=Thaps269759;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCD1];external_name=Thaps269759;logic_name=jgi_thaps3 chr14 ensembl transcript 449363 450157 . + . ID=Thaps269759;Parent=Thaps269759;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 449363 450157 . + 0 ID=Thaps269759;Parent=Thaps269759;rank=1 chr14 . exon 449363 450157 . + . ID=Thaps269759.1;Parent=Thaps269759;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 440245 441246 . + . ID=Thaps37306;biotype=protein_coding;description=RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8CCC7];external_name=Thaps37306;logic_name=jgi_thaps3 chr14 ensembl transcript 440245 441246 . + . ID=Thaps37306;Parent=Thaps37306;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 440245 440745 . + 0 ID=Thaps37306;Parent=Thaps37306;rank=1 chr14 . exon 440245 440745 . + . ID=Thaps37306.1;Parent=Thaps37306;constitutive=1;rank=1 chr14 . CDS 440797 441246 . + 0 ID=Thaps37306;Parent=Thaps37306;rank=2 chr14 . exon 440797 441246 . + . ID=Thaps37306.2;Parent=Thaps37306;constitutive=1;rank=2 chr14 . repeat_region 457890 457902 . ? . description=dust chr14 . biological_region 458115 458116 0.999 + . logic_name=eponine chr14 ensembl protein_coding_gene 454581 455776 . + . ID=Thaps264161;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCD3];external_name=Thaps264161;logic_name=jgi_thaps3 chr14 ensembl transcript 454581 455776 . + . ID=Thaps264161;Parent=Thaps264161;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 454581 454818 . + 0 ID=Thaps264161;Parent=Thaps264161;rank=1 chr14 . exon 454581 454818 . + . ID=Thaps264161.1;Parent=Thaps264161;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 454896 455025 . + 0 ID=Thaps264161;Parent=Thaps264161;rank=2 chr14 . exon 454896 455025 . + . ID=Thaps264161.2;Parent=Thaps264161;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 455092 455176 . + 0 ID=Thaps264161;Parent=Thaps264161;rank=3 chr14 . exon 455092 455176 . + . ID=Thaps264161.3;Parent=Thaps264161;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 455715 455776 . + 0 ID=Thaps264161;Parent=Thaps264161;rank=4 chr14 . exon 455715 455776 . + . ID=Thaps264161.4;Parent=Thaps264161;constitutive=1;ensembl_end_phase=2;rank=4 chr14 ensembl protein_coding_gene 458202 459122 . + . ID=Thaps264164;biotype=protein_coding;description=Tom40-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCD5];external_name=Thaps264164;logic_name=jgi_thaps3 chr14 ensembl transcript 458202 459122 . + . ID=Thaps264164;Parent=Thaps264164;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 458202 458766 . + 0 ID=Thaps264164;Parent=Thaps264164;rank=1 chr14 . exon 458202 458766 . + . ID=Thaps264164.1;Parent=Thaps264164;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 458833 459122 . + 0 ID=Thaps264164;Parent=Thaps264164;rank=2 chr14 . exon 458833 459122 . + . ID=Thaps264164.2;Parent=Thaps264164;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 456737 457414 . - . ID=Thaps37359;biotype=protein_coding;description=ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CCD4];external_name=CLPP6;logic_name=jgi_thaps3 chr14 ensembl transcript 456737 457414 . - . ID=Thaps37359;Parent=Thaps37359;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 456737 457414 . - 0 ID=Thaps37359;Parent=Thaps37359;rank=1 chr14 . exon 456737 457414 . - . ID=Thaps37359.1;Parent=Thaps37359;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 452638 453870 . + . ID=Thaps37523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCD2];external_name=Thaps37523;logic_name=jgi_thaps3 chr14 ensembl transcript 452638 453870 . + . ID=Thaps37523;Parent=Thaps37523;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 452638 452829 . + 0 ID=Thaps37523;Parent=Thaps37523;rank=1 chr14 . exon 452638 452829 . + . ID=Thaps37523.1;Parent=Thaps37523;constitutive=1;rank=1 chr14 . CDS 452913 453514 . + 0 ID=Thaps37523;Parent=Thaps37523;rank=2 chr14 . exon 452913 453514 . + . ID=Thaps37523.2;Parent=Thaps37523;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 453603 453870 . + 0 ID=Thaps37523;Parent=Thaps37523;rank=3 chr14 . exon 453603 453870 . + . ID=Thaps37523.3;Parent=Thaps37523;constitutive=1;ensembl_end_phase=1;rank=3 chr14 ensembl protein_coding_gene 465602 466522 . + . ID=Thaps269763;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCD8];external_name=Thaps269763;logic_name=jgi_thaps3 chr14 ensembl transcript 465602 466522 . + . ID=Thaps269763;Parent=Thaps269763;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 465602 466093 . + 0 ID=Thaps269763;Parent=Thaps269763;rank=1 chr14 . exon 465602 466093 . + . ID=Thaps269763.1;Parent=Thaps269763;constitutive=1;rank=1 chr14 . CDS 466223 466424 . + 0 ID=Thaps269763;Parent=Thaps269763;rank=2 chr14 . exon 466223 466424 . + . ID=Thaps269763.2;Parent=Thaps269763;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 466449 466522 . + 0 ID=Thaps269763;Parent=Thaps269763;rank=3 chr14 . exon 466449 466522 . + . ID=Thaps269763.3;Parent=Thaps269763;constitutive=1;ensembl_end_phase=2;rank=3 chr14 ensembl protein_coding_gene 467076 468224 . - . ID=Thaps269764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCD9];external_name=Thaps269764;logic_name=jgi_thaps3 chr14 ensembl transcript 467076 468224 . - . ID=Thaps269764;Parent=Thaps269764;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 467076 467481 . - 0 ID=Thaps269764;Parent=Thaps269764;rank=3 chr14 . exon 467076 467481 . - . ID=Thaps269764.3;Parent=Thaps269764;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 467524 467858 . - 0 ID=Thaps269764;Parent=Thaps269764;rank=2 chr14 . exon 467524 467858 . - . ID=Thaps269764.2;Parent=Thaps269764;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 467955 468224 . - 0 ID=Thaps269764;Parent=Thaps269764;rank=1 chr14 . exon 467955 468224 . - . ID=Thaps269764.1;Parent=Thaps269764;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 463547 465028 . - . ID=Thaps37534;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCD7];external_name=Thaps37534;logic_name=jgi_thaps3 chr14 ensembl transcript 463547 465028 . - . ID=Thaps37534;Parent=Thaps37534;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 463547 464046 . - 0 ID=Thaps37534;Parent=Thaps37534;rank=2 chr14 . exon 463547 464046 . - . ID=Thaps37534.2;Parent=Thaps37534;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 464212 465028 . - 0 ID=Thaps37534;Parent=Thaps37534;rank=1 chr14 . exon 464212 465028 . - . ID=Thaps37534.1;Parent=Thaps37534;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 460757 463377 . + . ID=Thaps9818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCD6];external_name=Thaps9818;logic_name=jgi_thaps3 chr14 ensembl transcript 460757 463377 . + . ID=Thaps9818;Parent=Thaps9818;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 460757 461168 . + 0 ID=Thaps9818;Parent=Thaps9818;rank=1 chr14 . exon 460757 461168 . + . ID=Thaps9818.1;Parent=Thaps9818;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 461293 461671 . + 0 ID=Thaps9818;Parent=Thaps9818;rank=2 chr14 . exon 461293 461671 . + . ID=Thaps9818.2;Parent=Thaps9818;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 461759 462104 . + 0 ID=Thaps9818;Parent=Thaps9818;rank=3 chr14 . exon 461759 462104 . + . ID=Thaps9818.3;Parent=Thaps9818;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 462187 462429 . + 0 ID=Thaps9818;Parent=Thaps9818;rank=4 chr14 . exon 462187 462429 . + . ID=Thaps9818.4;Parent=Thaps9818;constitutive=1;rank=4 chr14 . CDS 462508 463377 . + 0 ID=Thaps9818;Parent=Thaps9818;rank=5 chr14 . exon 462508 463377 . + . ID=Thaps9818.5;Parent=Thaps9818;constitutive=1;rank=5 chr14 ensembl protein_coding_gene 468578 470032 . + . ID=Thaps9822;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCE0];external_name=Thaps9822;logic_name=jgi_thaps3 chr14 ensembl transcript 468578 470032 . + . ID=Thaps9822;Parent=Thaps9822;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 468578 470032 . + 0 ID=Thaps9822;Parent=Thaps9822;rank=1 chr14 . exon 468578 470032 . + . ID=Thaps9822.1;Parent=Thaps9822;constitutive=1;rank=1 chr14 . repeat_region 476099 476155 . ? . description=dust chr14 . repeat_region 476157 476199 . ? . description=dust chr14 . repeat_region 476170 476197 . ? . description=trf chr14 . repeat_region 476963 476999 . ? . description=trf chr14 ensembl protein_coding_gene 472529 473518 . - . ID=Thaps17193;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCE2];external_name=Thaps17193;logic_name=jgi_thaps3 chr14 ensembl transcript 472529 473518 . - . ID=Thaps17193;Parent=Thaps17193;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 472529 472620 . - 0 ID=Thaps17193;Parent=Thaps17193;rank=5 chr14 . exon 472529 472620 . - . ID=Thaps17193.5;Parent=Thaps17193;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 472703 472723 . - 0 ID=Thaps17193;Parent=Thaps17193;rank=4 chr14 . exon 472703 472723 . - . ID=Thaps17193.4;Parent=Thaps17193;constitutive=1;rank=4 chr14 . CDS 472820 473099 . - 0 ID=Thaps17193;Parent=Thaps17193;rank=3 chr14 . exon 472820 473099 . - . ID=Thaps17193.3;Parent=Thaps17193;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 473208 473293 . - 0 ID=Thaps17193;Parent=Thaps17193;rank=2 chr14 . exon 473208 473293 . - . ID=Thaps17193.2;Parent=Thaps17193;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 473398 473518 . - 0 ID=Thaps17193;Parent=Thaps17193;rank=1 chr14 . exon 473398 473518 . - . ID=Thaps17193.1;Parent=Thaps17193;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 470466 471764 . - . ID=Thaps269765;biotype=protein_coding;description=Psedouridylate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CCE1];external_name=Thaps269765;logic_name=jgi_thaps3 chr14 ensembl transcript 470466 471764 . - . ID=Thaps269765;Parent=Thaps269765;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 470466 471254 . - 0 ID=Thaps269765;Parent=Thaps269765;rank=2 chr14 . exon 470466 471254 . - . ID=Thaps269765.2;Parent=Thaps269765;constitutive=1;rank=2 chr14 . CDS 471564 471764 . - 0 ID=Thaps269765;Parent=Thaps269765;rank=1 chr14 . exon 471564 471764 . - . ID=Thaps269765.1;Parent=Thaps269765;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 476303 477136 . + . ID=Thaps37409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCE3];external_name=Thaps37409;logic_name=jgi_thaps3 chr14 ensembl transcript 476303 477136 . + . ID=Thaps37409;Parent=Thaps37409;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 476303 476945 . + 0 ID=Thaps37409;Parent=Thaps37409;rank=1 chr14 . exon 476303 476945 . + . ID=Thaps37409.1;Parent=Thaps37409;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 476997 477136 . + 0 ID=Thaps37409;Parent=Thaps37409;rank=2 chr14 . exon 476997 477136 . + . ID=Thaps37409.2;Parent=Thaps37409;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 477859 479583 . - . ID=Thaps37410;biotype=protein_coding;description=T-complex protein 1 subunit alpha [Source:UniProtKB/TrEMBL%3BAcc:B8CCE4];external_name=Thaps37410;logic_name=jgi_thaps3 chr14 ensembl transcript 477859 479583 . - . ID=Thaps37410;Parent=Thaps37410;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 477859 478962 . - 0 ID=Thaps37410;Parent=Thaps37410;rank=2 chr14 . exon 477859 478962 . - . ID=Thaps37410.2;Parent=Thaps37410;constitutive=1;rank=2 chr14 . CDS 479041 479583 . - 0 ID=Thaps37410;Parent=Thaps37410;rank=1 chr14 . exon 479041 479583 . - . ID=Thaps37410.1;Parent=Thaps37410;constitutive=1;rank=1 chr14 . repeat_region 481661 481794 . + . description=TE2c_TP chr14 . repeat_region 482106 482161 . + . description=TE2c_TP chr14 . repeat_region 483512 483703 . - . description=tp13_ASNotSingleton chr14 . repeat_region 483745 484038 . + . description=TE2c_TP chr14 . repeat_region 484171 484630 . + . description=Gypsy3LTR_TP chr14 ensembl protein_coding_gene 480019 481542 . + . ID=Thaps37458;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCE5];external_name=Thaps37458;logic_name=jgi_thaps3 chr14 ensembl transcript 480019 481542 . + . ID=Thaps37458;Parent=Thaps37458;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 480019 480166 . + 0 ID=Thaps37458;Parent=Thaps37458;rank=1 chr14 . exon 480019 480166 . + . ID=Thaps37458.1;Parent=Thaps37458;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 480215 480910 . + 0 ID=Thaps37458;Parent=Thaps37458;rank=2 chr14 . exon 480215 480910 . + . ID=Thaps37458.2;Parent=Thaps37458;constitutive=1;rank=2 chr14 . CDS 480980 481153 . + 0 ID=Thaps37458;Parent=Thaps37458;rank=3 chr14 . exon 480980 481153 . + . ID=Thaps37458.3;Parent=Thaps37458;constitutive=1;rank=3 chr14 . CDS 481358 481542 . + 0 ID=Thaps37458;Parent=Thaps37458;rank=4 chr14 . exon 481358 481542 . + . ID=Thaps37458.4;Parent=Thaps37458;constitutive=1;ensembl_end_phase=2;rank=4 chr14 ensembl protein_coding_gene 485351 486496 . - . ID=Thaps9830;biotype=protein_coding;description=Cystathionine beta-lyase [Source:UniProtKB/TrEMBL%3BAcc:B8CCE6];external_name=CBL1;logic_name=jgi_thaps3 chr14 ensembl transcript 485351 486496 . - . ID=Thaps9830;Parent=Thaps9830;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 485351 486496 . - 0 ID=Thaps9830;Parent=Thaps9830;rank=1 chr14 . exon 485351 486496 . - . ID=Thaps9830.1;Parent=Thaps9830;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 488384 488788 . + . ID=Thaps9831;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCE7];external_name=Thaps9831;logic_name=jgi_thaps3 chr14 ensembl transcript 488384 488788 . + . ID=Thaps9831;Parent=Thaps9831;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 488384 488788 . + 0 ID=Thaps9831;Parent=Thaps9831;rank=1 chr14 . exon 488384 488788 . + . ID=Thaps9831.1;Parent=Thaps9831;constitutive=1;rank=1 chr14 . repeat_region 492450 492486 . ? . description=trf chr14 . repeat_region 492635 492643 . ? . description=dust chr14 . repeat_region 492756 492778 . ? . description=trf chr14 . repeat_region 496407 496469 . ? . description=dust chr14 . repeat_region 496448 496469 . ? . description=trf chr14 ensembl protein_coding_gene 490310 492106 . + . ID=Thaps24849;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCE8];external_name=Thaps24849;logic_name=jgi_thaps3 chr14 ensembl transcript 490310 492106 . + . ID=Thaps24849;Parent=Thaps24849;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 490310 492106 . + 0 ID=Thaps24849;Parent=Thaps24849;rank=1 chr14 . exon 490310 492106 . + . ID=Thaps24849.1;Parent=Thaps24849;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 497775 499688 . + . ID=Thaps24850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF2];external_name=Thaps24850;logic_name=jgi_thaps3 chr14 ensembl transcript 497775 499688 . + . ID=Thaps24850;Parent=Thaps24850;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 497775 498004 . + 0 ID=Thaps24850;Parent=Thaps24850;rank=1 chr14 . exon 497775 498004 . + . ID=Thaps24850.1;Parent=Thaps24850;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 498191 499688 . + 0 ID=Thaps24850;Parent=Thaps24850;rank=2 chr14 . exon 498191 499688 . + . ID=Thaps24850.2;Parent=Thaps24850;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 497269 497797 . - . ID=Thaps37441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF1];external_name=Thaps37441;logic_name=jgi_thaps3 chr14 ensembl transcript 497269 497797 . - . ID=Thaps37441;Parent=Thaps37441;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 497269 497491 . - 0 ID=Thaps37441;Parent=Thaps37441;rank=2 chr14 . exon 497269 497491 . - . ID=Thaps37441.2;Parent=Thaps37441;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 497589 497797 . - 0 ID=Thaps37441;Parent=Thaps37441;rank=1 chr14 . exon 497589 497797 . - . ID=Thaps37441.1;Parent=Thaps37441;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 492733 494451 . + . ID=Thaps9834;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCE9];external_name=Thaps9834;logic_name=jgi_thaps3 chr14 ensembl transcript 492733 494451 . + . ID=Thaps9834;Parent=Thaps9834;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 492733 492907 . + 0 ID=Thaps9834;Parent=Thaps9834;rank=1 chr14 . exon 492733 492907 . + . ID=Thaps9834.1;Parent=Thaps9834;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 493065 493855 . + 0 ID=Thaps9834;Parent=Thaps9834;rank=2 chr14 . exon 493065 493855 . + . ID=Thaps9834.2;Parent=Thaps9834;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 493939 494451 . + 0 ID=Thaps9834;Parent=Thaps9834;rank=3 chr14 . exon 493939 494451 . + . ID=Thaps9834.3;Parent=Thaps9834;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 494736 496594 . - . ID=Thaps9835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF0];external_name=Thaps9835;logic_name=jgi_thaps3 chr14 ensembl transcript 494736 496594 . - . ID=Thaps9835;Parent=Thaps9835;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 494736 495413 . - 0 ID=Thaps9835;Parent=Thaps9835;rank=2 chr14 . exon 494736 495413 . - . ID=Thaps9835.2;Parent=Thaps9835;constitutive=1;rank=2 chr14 . CDS 495500 496594 . - 0 ID=Thaps9835;Parent=Thaps9835;rank=1 chr14 . exon 495500 496594 . - . ID=Thaps9835.1;Parent=Thaps9835;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 499833 500933 . - . ID=Thaps16372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF3];external_name=Thaps16372;logic_name=jgi_thaps3 chr14 ensembl transcript 499833 500933 . - . ID=Thaps16372;Parent=Thaps16372;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 499833 500421 . - 0 ID=Thaps16372;Parent=Thaps16372;rank=3 chr14 . exon 499833 500421 . - . ID=Thaps16372.3;Parent=Thaps16372;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 500520 500757 . - 0 ID=Thaps16372;Parent=Thaps16372;rank=2 chr14 . exon 500520 500757 . - . ID=Thaps16372.2;Parent=Thaps16372;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 500849 500933 . - 0 ID=Thaps16372;Parent=Thaps16372;rank=1 chr14 . exon 500849 500933 . - . ID=Thaps16372.1;Parent=Thaps16372;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 501828 505947 . - . ID=Thaps24852;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF4];external_name=Thaps24852;logic_name=jgi_thaps3 chr14 ensembl transcript 501828 505947 . - . ID=Thaps24852;Parent=Thaps24852;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 501828 501857 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=10 chr14 . exon 501828 501857 . - . ID=Thaps24852.10;Parent=Thaps24852;constitutive=1;rank=10 chr14 . CDS 501900 502588 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=9 chr14 . exon 501900 502588 . - . ID=Thaps24852.9;Parent=Thaps24852;constitutive=1;ensembl_end_phase=2;rank=9 chr14 . CDS 502668 502998 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=8 chr14 . exon 502668 502998 . - . ID=Thaps24852.8;Parent=Thaps24852;constitutive=1;ensembl_end_phase=1;rank=8 chr14 . CDS 503080 503272 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=7 chr14 . exon 503080 503272 . - . ID=Thaps24852.7;Parent=Thaps24852;constitutive=1;ensembl_end_phase=1;rank=7 chr14 . CDS 503339 503415 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=6 chr14 . exon 503339 503415 . - . ID=Thaps24852.6;Parent=Thaps24852;constitutive=1;ensembl_end_phase=2;rank=6 chr14 . CDS 503499 503695 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=5 chr14 . exon 503499 503695 . - . ID=Thaps24852.5;Parent=Thaps24852;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 503770 503821 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=4 chr14 . exon 503770 503821 . - . ID=Thaps24852.4;Parent=Thaps24852;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 503901 504014 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=3 chr14 . exon 503901 504014 . - . ID=Thaps24852.3;Parent=Thaps24852;constitutive=1;rank=3 chr14 . CDS 504100 504456 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=2 chr14 . exon 504100 504456 . - . ID=Thaps24852.2;Parent=Thaps24852;constitutive=1;rank=2 chr14 . CDS 504541 505947 . - 0 ID=Thaps24852;Parent=Thaps24852;rank=1 chr14 . exon 504541 505947 . - . ID=Thaps24852.1;Parent=Thaps24852;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 506235 506927 . + . ID=Thaps24853;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF5];external_name=Thaps24853;logic_name=jgi_thaps3 chr14 ensembl transcript 506235 506927 . + . ID=Thaps24853;Parent=Thaps24853;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 506235 506927 . + 0 ID=Thaps24853;Parent=Thaps24853;rank=1 chr14 . exon 506235 506927 . + . ID=Thaps24853.1;Parent=Thaps24853;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 507218 508928 . - . ID=Thaps9840;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF6];external_name=Thaps9840;logic_name=jgi_thaps3 chr14 ensembl transcript 507218 508928 . - . ID=Thaps9840;Parent=Thaps9840;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 507218 508322 . - 0 ID=Thaps9840;Parent=Thaps9840;rank=3 chr14 . exon 507218 508322 . - . ID=Thaps9840.3;Parent=Thaps9840;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 508390 508678 . - 0 ID=Thaps9840;Parent=Thaps9840;rank=2 chr14 . exon 508390 508678 . - . ID=Thaps9840.2;Parent=Thaps9840;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 508769 508928 . - 0 ID=Thaps9840;Parent=Thaps9840;rank=1 chr14 . exon 508769 508928 . - . ID=Thaps9840.1;Parent=Thaps9840;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 509480 510469 . - . ID=Thaps24854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF7];external_name=Thaps24854;logic_name=jgi_thaps3 chr14 ensembl transcript 509480 510469 . - . ID=Thaps24854;Parent=Thaps24854;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 509480 510469 . - 0 ID=Thaps24854;Parent=Thaps24854;rank=1 chr14 . exon 509480 510469 . - . ID=Thaps24854.1;Parent=Thaps24854;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 510949 512928 . - . ID=Thaps24855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF8];external_name=Thaps24855;logic_name=jgi_thaps3 chr14 ensembl transcript 510949 512928 . - . ID=Thaps24855;Parent=Thaps24855;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 510949 512928 . - 0 ID=Thaps24855;Parent=Thaps24855;rank=1 chr14 . exon 510949 512928 . - . ID=Thaps24855.1;Parent=Thaps24855;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 513727 515104 . + . ID=Thaps24856;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCF9];external_name=Thaps24856;logic_name=jgi_thaps3 chr14 ensembl transcript 513727 515104 . + . ID=Thaps24856;Parent=Thaps24856;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 513727 513807 . + 0 ID=Thaps24856;Parent=Thaps24856;rank=1 chr14 . exon 513727 513807 . + . ID=Thaps24856.1;Parent=Thaps24856;constitutive=1;rank=1 chr14 . CDS 513938 513974 . + 0 ID=Thaps24856;Parent=Thaps24856;rank=2 chr14 . exon 513938 513974 . + . ID=Thaps24856.2;Parent=Thaps24856;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 514004 514291 . + 0 ID=Thaps24856;Parent=Thaps24856;rank=3 chr14 . exon 514004 514291 . + . ID=Thaps24856.3;Parent=Thaps24856;constitutive=1;rank=3 chr14 . CDS 514380 514803 . + 0 ID=Thaps24856;Parent=Thaps24856;rank=4 chr14 . exon 514380 514803 . + . ID=Thaps24856.4;Parent=Thaps24856;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 514903 515104 . + 0 ID=Thaps24856;Parent=Thaps24856;rank=5 chr14 . exon 514903 515104 . + . ID=Thaps24856.5;Parent=Thaps24856;constitutive=1;ensembl_end_phase=1;rank=5 chr14 ensembl protein_coding_gene 517574 519554 . - . ID=Thaps37398;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCG0];external_name=Thaps37398;logic_name=jgi_thaps3 chr14 ensembl transcript 517574 519554 . - . ID=Thaps37398;Parent=Thaps37398;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 517574 518000 . - 0 ID=Thaps37398;Parent=Thaps37398;rank=8 chr14 . exon 517574 518000 . - . ID=Thaps37398.8;Parent=Thaps37398;constitutive=1;ensembl_end_phase=1;rank=8 chr14 . CDS 518110 518216 . - 0 ID=Thaps37398;Parent=Thaps37398;rank=7 chr14 . exon 518110 518216 . - . ID=Thaps37398.7;Parent=Thaps37398;constitutive=1;ensembl_end_phase=2;rank=7 chr14 . CDS 518337 518388 . - 0 ID=Thaps37398;Parent=Thaps37398;rank=6 chr14 . exon 518337 518388 . - . ID=Thaps37398.6;Parent=Thaps37398;constitutive=1;ensembl_end_phase=1;rank=6 chr14 . CDS 518468 518674 . - 0 ID=Thaps37398;Parent=Thaps37398;rank=5 chr14 . exon 518468 518674 . - . ID=Thaps37398.5;Parent=Thaps37398;constitutive=1;rank=5 chr14 . CDS 518763 518877 . - 0 ID=Thaps37398;Parent=Thaps37398;rank=4 chr14 . exon 518763 518877 . - . ID=Thaps37398.4;Parent=Thaps37398;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 519003 519102 . - 0 ID=Thaps37398;Parent=Thaps37398;rank=3 chr14 . exon 519003 519102 . - . ID=Thaps37398.3;Parent=Thaps37398;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 519184 519220 . - 0 ID=Thaps37398;Parent=Thaps37398;rank=2 chr14 . exon 519184 519220 . - . ID=Thaps37398.2;Parent=Thaps37398;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 519301 519554 . - 0 ID=Thaps37398;Parent=Thaps37398;rank=1 chr14 . exon 519301 519554 . - . ID=Thaps37398.1;Parent=Thaps37398;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . repeat_region 524005 524069 . - . description=Copia9LTR_TP chr14 . repeat_region 524737 524758 . ? . description=trf chr14 . repeat_region 524737 524790 . ? . description=dust chr14 . repeat_region 524757 524790 . ? . description=trf chr14 . repeat_region 527367 527417 . ? . description=dust chr14 ensembl protein_coding_gene 524621 525549 . + . ID=Thaps24858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCG2];external_name=Thaps24858;logic_name=jgi_thaps3 chr14 ensembl transcript 524621 525549 . + . ID=Thaps24858;Parent=Thaps24858;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 524621 524991 . + 0 ID=Thaps24858;Parent=Thaps24858;rank=1 chr14 . exon 524621 524991 . + . ID=Thaps24858.1;Parent=Thaps24858;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 525066 525549 . + 0 ID=Thaps24858;Parent=Thaps24858;rank=2 chr14 . exon 525066 525549 . + . ID=Thaps24858.2;Parent=Thaps24858;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 526563 528377 . - . ID=Thaps37362;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCG3];external_name=Thaps37362;logic_name=jgi_thaps3 chr14 ensembl transcript 526563 528377 . - . ID=Thaps37362;Parent=Thaps37362;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 526563 526775 . - 0 ID=Thaps37362;Parent=Thaps37362;rank=4 chr14 . exon 526563 526775 . - . ID=Thaps37362.4;Parent=Thaps37362;constitutive=1;rank=4 chr14 . CDS 526884 527366 . - 0 ID=Thaps37362;Parent=Thaps37362;rank=3 chr14 . exon 526884 527366 . - . ID=Thaps37362.3;Parent=Thaps37362;constitutive=1;rank=3 chr14 . CDS 527571 527718 . - 0 ID=Thaps37362;Parent=Thaps37362;rank=2 chr14 . exon 527571 527718 . - . ID=Thaps37362.2;Parent=Thaps37362;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 527809 528377 . - 0 ID=Thaps37362;Parent=Thaps37362;rank=1 chr14 . exon 527809 528377 . - . ID=Thaps37362.1;Parent=Thaps37362;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 520346 523855 . + . ID=Thaps37450;biotype=protein_coding;description=Stromal processing peptidase [Source:UniProtKB/TrEMBL%3BAcc:B8CCG1];external_name=SPP1;logic_name=jgi_thaps3 chr14 ensembl transcript 520346 523855 . + . ID=Thaps37450;Parent=Thaps37450;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 520346 520466 . + 0 ID=Thaps37450;Parent=Thaps37450;rank=1 chr14 . exon 520346 520466 . + . ID=Thaps37450.1;Parent=Thaps37450;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 520694 521352 . + 0 ID=Thaps37450;Parent=Thaps37450;rank=2 chr14 . exon 520694 521352 . + . ID=Thaps37450.2;Parent=Thaps37450;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 521491 523561 . + 0 ID=Thaps37450;Parent=Thaps37450;rank=3 chr14 . exon 521491 523561 . + . ID=Thaps37450.3;Parent=Thaps37450;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 523644 523855 . + 0 ID=Thaps37450;Parent=Thaps37450;rank=4 chr14 . exon 523644 523855 . + . ID=Thaps37450.4;Parent=Thaps37450;constitutive=1;ensembl_end_phase=2;rank=4 chr14 ensembl protein_coding_gene 532568 533237 . + . ID=Thaps264177;biotype=protein_coding;description=Prolyl 4-hydroxylase alpha subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CCG6];external_name=Thaps264177;logic_name=jgi_thaps3 chr14 ensembl transcript 532568 533237 . + . ID=Thaps264177;Parent=Thaps264177;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 532568 532839 . + 0 ID=Thaps264177;Parent=Thaps264177;rank=1 chr14 . exon 532568 532839 . + . ID=Thaps264177.1;Parent=Thaps264177;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 532891 533237 . + 0 ID=Thaps264177;Parent=Thaps264177;rank=2 chr14 . exon 532891 533237 . + . ID=Thaps264177.2;Parent=Thaps264177;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 529502 530437 . + . ID=Thaps9848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCG4];external_name=Thaps9848;logic_name=jgi_thaps3 chr14 ensembl transcript 529502 530437 . + . ID=Thaps9848;Parent=Thaps9848;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 529502 530437 . + 0 ID=Thaps9848;Parent=Thaps9848;rank=1 chr14 . exon 529502 530437 . + . ID=Thaps9848.1;Parent=Thaps9848;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 530758 531435 . - . ID=Thaps9849;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCG5];external_name=Thaps9849;logic_name=jgi_thaps3 chr14 ensembl transcript 530758 531435 . - . ID=Thaps9849;Parent=Thaps9849;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 530758 531162 . - 0 ID=Thaps9849;Parent=Thaps9849;rank=2 chr14 . exon 530758 531162 . - . ID=Thaps9849.2;Parent=Thaps9849;constitutive=1;rank=2 chr14 . CDS 531265 531435 . - 0 ID=Thaps9849;Parent=Thaps9849;rank=1 chr14 . exon 531265 531435 . - . ID=Thaps9849.1;Parent=Thaps9849;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 533346 537185 . - . ID=Thaps9851;biotype=protein_coding;description=Smc-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCG7];external_name=Thaps9851;logic_name=jgi_thaps3 chr14 ensembl transcript 533346 537185 . - . ID=Thaps9851;Parent=Thaps9851;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 533346 534125 . - 0 ID=Thaps9851;Parent=Thaps9851;rank=6 chr14 . exon 533346 534125 . - . ID=Thaps9851.6;Parent=Thaps9851;constitutive=1;rank=6 chr14 . CDS 534213 534438 . - 0 ID=Thaps9851;Parent=Thaps9851;rank=5 chr14 . exon 534213 534438 . - . ID=Thaps9851.5;Parent=Thaps9851;constitutive=1;ensembl_end_phase=1;rank=5 chr14 . CDS 534541 535208 . - 0 ID=Thaps9851;Parent=Thaps9851;rank=4 chr14 . exon 534541 535208 . - . ID=Thaps9851.4;Parent=Thaps9851;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 535317 536641 . - 0 ID=Thaps9851;Parent=Thaps9851;rank=3 chr14 . exon 535317 536641 . - . ID=Thaps9851.3;Parent=Thaps9851;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 536720 536961 . - 0 ID=Thaps9851;Parent=Thaps9851;rank=2 chr14 . exon 536720 536961 . - . ID=Thaps9851.2;Parent=Thaps9851;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 537043 537185 . - 0 ID=Thaps9851;Parent=Thaps9851;rank=1 chr14 . exon 537043 537185 . - . ID=Thaps9851.1;Parent=Thaps9851;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 537828 538525 . - . ID=Thaps9852;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCG8];external_name=Thaps9852;logic_name=jgi_thaps3 chr14 ensembl transcript 537828 538525 . - . ID=Thaps9852;Parent=Thaps9852;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 537828 538154 . - 0 ID=Thaps9852;Parent=Thaps9852;rank=2 chr14 . exon 537828 538154 . - . ID=Thaps9852.2;Parent=Thaps9852;constitutive=1;rank=2 chr14 . CDS 538322 538525 . - 0 ID=Thaps9852;Parent=Thaps9852;rank=1 chr14 . exon 538322 538525 . - . ID=Thaps9852.1;Parent=Thaps9852;constitutive=1;rank=1 chr14 . repeat_region 540202 540227 . ? . description=trf chr14 ensembl protein_coding_gene 544603 556634 . + . ID=Thaps24862;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH2];external_name=Thaps24862;logic_name=jgi_thaps3 chr14 ensembl transcript 544603 556634 . + . ID=Thaps24862;Parent=Thaps24862;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 544603 545346 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=1 chr14 . exon 544603 545346 . + . ID=Thaps24862.1;Parent=Thaps24862;constitutive=1;rank=1 chr14 . CDS 545426 545707 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=2 chr14 . exon 545426 545707 . + . ID=Thaps24862.2;Parent=Thaps24862;constitutive=1;rank=2 chr14 . CDS 545786 545839 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=3 chr14 . exon 545786 545839 . + . ID=Thaps24862.3;Parent=Thaps24862;constitutive=1;rank=3 chr14 . CDS 545911 546516 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=4 chr14 . exon 545911 546516 . + . ID=Thaps24862.4;Parent=Thaps24862;constitutive=1;rank=4 chr14 . CDS 546635 546680 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=5 chr14 . exon 546635 546680 . + . ID=Thaps24862.5;Parent=Thaps24862;constitutive=1;ensembl_end_phase=1;rank=5 chr14 . CDS 546706 547066 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=6 chr14 . exon 546706 547066 . + . ID=Thaps24862.6;Parent=Thaps24862;constitutive=1;ensembl_end_phase=1;rank=6 chr14 . CDS 547139 547897 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=7 chr14 . exon 547139 547897 . + . ID=Thaps24862.7;Parent=Thaps24862;constitutive=1;rank=7 chr14 . CDS 548017 548284 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=8 chr14 . exon 548017 548284 . + . ID=Thaps24862.8;Parent=Thaps24862;constitutive=1;ensembl_end_phase=1;rank=8 chr14 . CDS 548375 548428 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=9 chr14 . exon 548375 548428 . + . ID=Thaps24862.9;Parent=Thaps24862;constitutive=1;rank=9 chr14 . CDS 548509 549114 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=10 chr14 . exon 548509 549114 . + . ID=Thaps24862.10;Parent=Thaps24862;constitutive=1;rank=10 chr14 . CDS 549190 549626 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=11 chr14 . exon 549190 549626 . + . ID=Thaps24862.11;Parent=Thaps24862;constitutive=1;ensembl_end_phase=2;rank=11 chr14 . CDS 549719 550487 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=12 chr14 . CDS 550573 550857 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=13 chr14 . CDS 550939 550992 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=14 chr14 . CDS 551068 552748 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=15 chr14 . CDS 552851 553158 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=16 chr14 . CDS 553230 555195 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=17 chr14 . CDS 555276 555397 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=18 chr14 . CDS 555477 555731 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=19 chr14 . CDS 555807 556634 . + 0 ID=Thaps24862;Parent=Thaps24862;rank=20 chr14 ensembl protein_coding_gene 542294 542662 . + . ID=Thaps264181;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH0];external_name=Thaps264181;logic_name=jgi_thaps3 chr14 ensembl transcript 542294 542662 . + . ID=Thaps264181;Parent=Thaps264181;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 542294 542662 . + 0 ID=Thaps264181;Parent=Thaps264181;rank=1 chr14 . exon 542294 542662 . + . ID=Thaps264181.1;Parent=Thaps264181;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 539406 539945 . - . ID=Thaps37427;biotype=protein_coding;description=Cyclin-dependent kinase [Source:UniProtKB/TrEMBL%3BAcc:B8CCG9];external_name=CDK1;logic_name=jgi_thaps3 chr14 ensembl transcript 539406 539945 . - . ID=Thaps37427;Parent=Thaps37427;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 539406 539580 . - 0 ID=Thaps37427;Parent=Thaps37427;rank=2 chr14 . exon 539406 539580 . - . ID=Thaps37427.2;Parent=Thaps37427;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 539887 539945 . - 0 ID=Thaps37427;Parent=Thaps37427;rank=1 chr14 . exon 539887 539945 . - . ID=Thaps37427.1;Parent=Thaps37427;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 542993 544225 . - . ID=Thaps9855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH1];external_name=Thaps9855;logic_name=jgi_thaps3 chr14 ensembl transcript 542993 544225 . - . ID=Thaps9855;Parent=Thaps9855;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 542993 544069 . - 0 ID=Thaps9855;Parent=Thaps9855;rank=2 chr14 . exon 542993 544069 . - . ID=Thaps9855.2;Parent=Thaps9855;constitutive=1;rank=2 chr14 . CDS 544091 544225 . - 0 ID=Thaps9855;Parent=Thaps9855;rank=1 chr14 . exon 544091 544225 . - . ID=Thaps9855.1;Parent=Thaps9855;constitutive=1;rank=1 chr14 . repeat_region 558220 558277 . ? . description=dust chr14 . exon 549719 550487 . + . ID=Thaps24862.12;Parent=Thaps24862;constitutive=1;ensembl_end_phase=1;rank=12 chr14 . exon 550573 550857 . + . ID=Thaps24862.13;Parent=Thaps24862;constitutive=1;rank=13 chr14 . exon 550939 550992 . + . ID=Thaps24862.14;Parent=Thaps24862;constitutive=1;rank=14 chr14 . exon 551068 552748 . + . ID=Thaps24862.15;Parent=Thaps24862;constitutive=1;ensembl_end_phase=1;rank=15 chr14 . exon 552851 553158 . + . ID=Thaps24862.16;Parent=Thaps24862;constitutive=1;ensembl_end_phase=2;rank=16 chr14 . exon 553230 555195 . + . ID=Thaps24862.17;Parent=Thaps24862;constitutive=1;ensembl_end_phase=1;rank=17 chr14 . exon 555276 555397 . + . ID=Thaps24862.18;Parent=Thaps24862;constitutive=1;ensembl_end_phase=2;rank=18 chr14 . exon 555477 555731 . + . ID=Thaps24862.19;Parent=Thaps24862;constitutive=1;rank=19 chr14 . exon 555807 556634 . + . ID=Thaps24862.20;Parent=Thaps24862;constitutive=1;rank=20 chr14 ensembl protein_coding_gene 557053 560088 . - . ID=Thaps24863;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH3];external_name=Thaps24863;logic_name=jgi_thaps3 chr14 ensembl transcript 557053 560088 . - . ID=Thaps24863;Parent=Thaps24863;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 557053 557090 . - 0 ID=Thaps24863;Parent=Thaps24863;rank=6 chr14 . exon 557053 557090 . - . ID=Thaps24863.6;Parent=Thaps24863;constitutive=1;ensembl_end_phase=2;rank=6 chr14 . CDS 557137 557909 . - 0 ID=Thaps24863;Parent=Thaps24863;rank=5 chr14 . exon 557137 557909 . - . ID=Thaps24863.5;Parent=Thaps24863;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 558023 558499 . - 0 ID=Thaps24863;Parent=Thaps24863;rank=4 chr14 . exon 558023 558499 . - . ID=Thaps24863.4;Parent=Thaps24863;constitutive=1;rank=4 chr14 . CDS 558650 559284 . - 0 ID=Thaps24863;Parent=Thaps24863;rank=3 chr14 . exon 558650 559284 . - . ID=Thaps24863.3;Parent=Thaps24863;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 559487 559788 . - 0 ID=Thaps24863;Parent=Thaps24863;rank=2 chr14 . CDS 560025 560088 . - 0 ID=Thaps24863;Parent=Thaps24863;rank=1 chr14 . repeat_region 566586 566639 . ? . description=trf chr14 . repeat_region 566636 566662 . ? . description=trf chr14 . exon 559487 559788 . - . ID=Thaps24863.2;Parent=Thaps24863;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . exon 560025 560088 . - . ID=Thaps24863.1;Parent=Thaps24863;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 560711 561535 . + . ID=Thaps24864;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH4];external_name=Thaps24864;logic_name=jgi_thaps3 chr14 ensembl transcript 560711 561535 . + . ID=Thaps24864;Parent=Thaps24864;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 560711 561535 . + 0 ID=Thaps24864;Parent=Thaps24864;rank=1 chr14 . exon 560711 561535 . + . ID=Thaps24864.1;Parent=Thaps24864;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 562159 563596 . + . ID=Thaps37277;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH5];external_name=Thaps37277;logic_name=jgi_thaps3 chr14 ensembl transcript 562159 563596 . + . ID=Thaps37277;Parent=Thaps37277;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 562159 562881 . + 0 ID=Thaps37277;Parent=Thaps37277;rank=1 chr14 . exon 562159 562881 . + . ID=Thaps37277.1;Parent=Thaps37277;constitutive=1;rank=1 chr14 . CDS 562970 563596 . + 0 ID=Thaps37277;Parent=Thaps37277;rank=2 chr14 . exon 562970 563596 . + . ID=Thaps37277.2;Parent=Thaps37277;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 568905 570188 . + . ID=Thaps42412;biotype=protein_coding;description=Dna-directed RNA polymerase I 40kDa polypeptide%2C rpo1-1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH8];external_name=Thaps42412;logic_name=jgi_thaps3 chr14 ensembl transcript 568905 570188 . + . ID=Thaps42412;Parent=Thaps42412;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 568905 569336 . + 0 ID=Thaps42412;Parent=Thaps42412;rank=1 chr14 . exon 568905 569336 . + . ID=Thaps42412.1;Parent=Thaps42412;constitutive=1;rank=1 chr14 . CDS 569568 570188 . + 0 ID=Thaps42412;Parent=Thaps42412;rank=2 chr14 ensembl protein_coding_gene 564822 566302 . - . ID=Thaps9860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH6];external_name=Thaps9860;logic_name=jgi_thaps3 chr14 ensembl transcript 564822 566302 . - . ID=Thaps9860;Parent=Thaps9860;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 564822 565073 . - 0 ID=Thaps9860;Parent=Thaps9860;rank=3 chr14 . exon 564822 565073 . - . ID=Thaps9860.3;Parent=Thaps9860;constitutive=1;rank=3 chr14 . CDS 565160 565568 . - 0 ID=Thaps9860;Parent=Thaps9860;rank=2 chr14 . exon 565160 565568 . - . ID=Thaps9860.2;Parent=Thaps9860;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 565650 566302 . - 0 ID=Thaps9860;Parent=Thaps9860;rank=1 chr14 . exon 565650 566302 . - . ID=Thaps9860.1;Parent=Thaps9860;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 566731 568423 . + . ID=Thaps9861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH7];external_name=Thaps9861;logic_name=jgi_thaps3 chr14 ensembl transcript 566731 568423 . + . ID=Thaps9861;Parent=Thaps9861;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 566731 567220 . + 0 ID=Thaps9861;Parent=Thaps9861;rank=1 chr14 . exon 566731 567220 . + . ID=Thaps9861.1;Parent=Thaps9861;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 567278 567482 . + 0 ID=Thaps9861;Parent=Thaps9861;rank=2 chr14 . exon 567278 567482 . + . ID=Thaps9861.2;Parent=Thaps9861;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 567559 568423 . + 0 ID=Thaps9861;Parent=Thaps9861;rank=3 chr14 . exon 567559 568423 . + . ID=Thaps9861.3;Parent=Thaps9861;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . repeat_region 573835 573871 . ? . description=dust chr14 . repeat_region 575015 575074 . ? . description=dust chr14 . repeat_region 575207 575258 . ? . description=dust chr14 ensembl protein_coding_gene 570911 573514 . - . ID=Thaps24867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCH9];external_name=Thaps24867;logic_name=jgi_thaps3 chr14 ensembl transcript 570911 573514 . - . ID=Thaps24867;Parent=Thaps24867;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 570911 573514 . - 0 ID=Thaps24867;Parent=Thaps24867;rank=1 chr14 . exon 570911 573514 . - . ID=Thaps24867.1;Parent=Thaps24867;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 574805 574981 . + . ID=Thaps37549;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI0];external_name=Thaps37549;logic_name=jgi_thaps3 chr14 ensembl transcript 574805 574981 . + . ID=Thaps37549;Parent=Thaps37549;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 574805 574981 . + 0 ID=Thaps37549;Parent=Thaps37549;rank=1 chr14 . exon 574805 574981 . + . ID=Thaps37549.1;Parent=Thaps37549;constitutive=1;rank=1 chr14 . exon 569568 570188 . + . ID=Thaps42412.2;Parent=Thaps42412;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 576284 577471 . + . ID=Thaps9865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI1];external_name=Thaps9865;logic_name=jgi_thaps3 chr14 ensembl transcript 576284 577471 . + . ID=Thaps9865;Parent=Thaps9865;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 576284 577471 . + 0 ID=Thaps9865;Parent=Thaps9865;rank=1 chr14 . exon 576284 577471 . + . ID=Thaps9865.1;Parent=Thaps9865;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 577737 578276 . + . ID=Thaps9866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI2];external_name=Thaps9866;logic_name=jgi_thaps3 chr14 ensembl transcript 577737 578276 . + . ID=Thaps9866;Parent=Thaps9866;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 577737 578276 . + 0 ID=Thaps9866;Parent=Thaps9866;rank=1 chr14 . exon 577737 578276 . + . ID=Thaps9866.1;Parent=Thaps9866;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 582547 583636 . - . ID=Thaps264184;biotype=protein_coding;external_name=Thaps264184;logic_name=jgi_thaps3 chr14 ensembl transcript 582547 583636 . - . ID=Thaps264184;Parent=Thaps264184;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 582547 583636 . - 0 ID=Thaps264184;Parent=Thaps264184;rank=1 chr14 . exon 582547 583636 . - . ID=Thaps264184.1;Parent=Thaps264184;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 586334 589189 . + . ID=Thaps37376;biotype=protein_coding;description=Myosin heavy chain-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI4];external_name=MYO6;logic_name=jgi_thaps3 chr14 ensembl transcript 586334 589189 . + . ID=Thaps37376;Parent=Thaps37376;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 586334 586622 . + 0 ID=Thaps37376;Parent=Thaps37376;rank=1 chr14 . exon 586334 586622 . + . ID=Thaps37376.1;Parent=Thaps37376;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 586695 588571 . + 0 ID=Thaps37376;Parent=Thaps37376;rank=2 chr14 . exon 586695 588571 . + . ID=Thaps37376.2;Parent=Thaps37376;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 588671 589189 . + 0 ID=Thaps37376;Parent=Thaps37376;rank=3 chr14 . exon 588671 589189 . + . ID=Thaps37376.3;Parent=Thaps37376;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 579331 582122 . - . ID=Thaps9867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI3];external_name=Thaps9867;logic_name=jgi_thaps3 chr14 ensembl transcript 579331 582122 . - . ID=Thaps9867;Parent=Thaps9867;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 579331 579542 . - 0 ID=Thaps9867;Parent=Thaps9867;rank=3 chr14 . exon 579331 579542 . - . ID=Thaps9867.3;Parent=Thaps9867;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 579716 581965 . - 0 ID=Thaps9867;Parent=Thaps9867;rank=2 chr14 . exon 579716 581965 . - . ID=Thaps9867.2;Parent=Thaps9867;constitutive=1;rank=2 chr14 . CDS 582026 582122 . - 0 ID=Thaps9867;Parent=Thaps9867;rank=1 chr14 . exon 582026 582122 . - . ID=Thaps9867.1;Parent=Thaps9867;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 591534 598415 . - . ID=Thaps24870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI5];external_name=Thaps24870;logic_name=jgi_thaps3 chr14 ensembl transcript 591534 598415 . - . ID=Thaps24870;Parent=Thaps24870;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 591534 591574 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=10 chr14 . exon 591534 591574 . - . ID=Thaps24870.10;Parent=Thaps24870;constitutive=1;ensembl_end_phase=2;rank=10 chr14 . CDS 591753 592070 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=9 chr14 . exon 591753 592070 . - . ID=Thaps24870.9;Parent=Thaps24870;constitutive=1;rank=9 chr14 . CDS 592154 593447 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=8 chr14 . exon 592154 593447 . - . ID=Thaps24870.8;Parent=Thaps24870;constitutive=1;ensembl_end_phase=1;rank=8 chr14 . CDS 594029 594333 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=7 chr14 . exon 594029 594333 . - . ID=Thaps24870.7;Parent=Thaps24870;constitutive=1;ensembl_end_phase=2;rank=7 chr14 . CDS 594422 595236 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=6 chr14 . exon 594422 595236 . - . ID=Thaps24870.6;Parent=Thaps24870;constitutive=1;ensembl_end_phase=2;rank=6 chr14 . CDS 595267 595899 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=5 chr14 . exon 595267 595899 . - . ID=Thaps24870.5;Parent=Thaps24870;constitutive=1;rank=5 chr14 . CDS 595992 596363 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=4 chr14 . exon 595992 596363 . - . ID=Thaps24870.4;Parent=Thaps24870;constitutive=1;rank=4 chr14 . CDS 596442 596768 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=3 chr14 . exon 596442 596768 . - . ID=Thaps24870.3;Parent=Thaps24870;constitutive=1;rank=3 chr14 . CDS 596892 597310 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=2 chr14 . exon 596892 597310 . - . ID=Thaps24870.2;Parent=Thaps24870;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 597399 598415 . - 0 ID=Thaps24870;Parent=Thaps24870;rank=1 chr14 . exon 597399 598415 . - . ID=Thaps24870.1;Parent=Thaps24870;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 598805 600256 . + . ID=Thaps24871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI6];external_name=Thaps24871;logic_name=jgi_thaps3 chr14 ensembl transcript 598805 600256 . + . ID=Thaps24871;Parent=Thaps24871;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 598805 599708 . + 0 ID=Thaps24871;Parent=Thaps24871;rank=1 chr14 . exon 598805 599708 . + . ID=Thaps24871.1;Parent=Thaps24871;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 599790 599866 . + 0 ID=Thaps24871;Parent=Thaps24871;rank=2 chr14 . CDS 599939 600256 . + 0 ID=Thaps24871;Parent=Thaps24871;rank=3 chr14 . repeat_region 605488 605531 . ? . description=dust chr14 . repeat_region 605501 605521 . ? . description=trf chr14 . exon 599790 599866 . + . ID=Thaps24871.2;Parent=Thaps24871;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . exon 599939 600256 . + . ID=Thaps24871.3;Parent=Thaps24871;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 601129 602611 . + . ID=Thaps269773;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI7];external_name=Thaps269773;logic_name=jgi_thaps3 chr14 ensembl transcript 601129 602611 . + . ID=Thaps269773;Parent=Thaps269773;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 601129 601370 . + 0 ID=Thaps269773;Parent=Thaps269773;rank=1 chr14 . exon 601129 601370 . + . ID=Thaps269773.1;Parent=Thaps269773;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 601506 601586 . + 0 ID=Thaps269773;Parent=Thaps269773;rank=2 chr14 . exon 601506 601586 . + . ID=Thaps269773.2;Parent=Thaps269773;constitutive=1;rank=2 chr14 . CDS 601665 601773 . + 0 ID=Thaps269773;Parent=Thaps269773;rank=3 chr14 . exon 601665 601773 . + . ID=Thaps269773.3;Parent=Thaps269773;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 601896 602067 . + 0 ID=Thaps269773;Parent=Thaps269773;rank=4 chr14 . exon 601896 602067 . + . ID=Thaps269773.4;Parent=Thaps269773;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 602122 602264 . + 0 ID=Thaps269773;Parent=Thaps269773;rank=5 chr14 . exon 602122 602264 . + . ID=Thaps269773.5;Parent=Thaps269773;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 602348 602611 . + 0 ID=Thaps269773;Parent=Thaps269773;rank=6 chr14 . exon 602348 602611 . + . ID=Thaps269773.6;Parent=Thaps269773;constitutive=1;rank=6 chr14 ensembl protein_coding_gene 606407 607601 . + . ID=Thaps9874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI8];external_name=Thaps9874;logic_name=jgi_thaps3 chr14 ensembl transcript 606407 607601 . + . ID=Thaps9874;Parent=Thaps9874;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 606407 607415 . + 0 ID=Thaps9874;Parent=Thaps9874;rank=1 chr14 . exon 606407 607415 . + . ID=Thaps9874.1;Parent=Thaps9874;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 607570 607601 . + 0 ID=Thaps9874;Parent=Thaps9874;rank=2 chr14 . exon 607570 607601 . + . ID=Thaps9874.2;Parent=Thaps9874;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 609273 614996 . + . ID=Thaps24873;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCI9];external_name=Thaps24873;logic_name=jgi_thaps3 chr14 ensembl transcript 609273 614996 . + . ID=Thaps24873;Parent=Thaps24873;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 609273 613028 . + 0 ID=Thaps24873;Parent=Thaps24873;rank=1 chr14 . exon 609273 613028 . + . ID=Thaps24873.1;Parent=Thaps24873;constitutive=1;rank=1 chr14 . CDS 613107 613684 . + 0 ID=Thaps24873;Parent=Thaps24873;rank=2 chr14 . exon 613107 613684 . + . ID=Thaps24873.2;Parent=Thaps24873;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 613760 614996 . + 0 ID=Thaps24873;Parent=Thaps24873;rank=3 chr14 . exon 613760 614996 . + . ID=Thaps24873.3;Parent=Thaps24873;constitutive=1;ensembl_end_phase=1;rank=3 chr14 ensembl protein_coding_gene 615468 617754 . - . ID=Thaps24874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ0];external_name=Thaps24874;logic_name=jgi_thaps3 chr14 ensembl transcript 615468 617754 . - . ID=Thaps24874;Parent=Thaps24874;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 615468 615839 . - 0 ID=Thaps24874;Parent=Thaps24874;rank=3 chr14 . exon 615468 615839 . - . ID=Thaps24874.3;Parent=Thaps24874;constitutive=1;rank=3 chr14 . CDS 615931 617468 . - 0 ID=Thaps24874;Parent=Thaps24874;rank=2 chr14 . exon 615931 617468 . - . ID=Thaps24874.2;Parent=Thaps24874;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 617736 617754 . - 0 ID=Thaps24874;Parent=Thaps24874;rank=1 chr14 . exon 617736 617754 . - . ID=Thaps24874.1;Parent=Thaps24874;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 619135 619383 . + . ID=Thaps30036;biotype=protein_coding;description=RS27%2C ribosomal protein 27 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ1];external_name=RS27;logic_name=jgi_thaps3 chr14 ensembl transcript 619135 619383 . + . ID=Thaps30036;Parent=Thaps30036;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 619135 619383 . + 0 ID=Thaps30036;Parent=Thaps30036;rank=1 chr14 . exon 619135 619383 . + . ID=Thaps30036.1;Parent=Thaps30036;constitutive=1;rank=1 chr14 . repeat_region 622857 622912 . ? . description=dust chr14 . repeat_region 623341 623398 . ? . description=dust chr14 ensembl protein_coding_gene 622799 623964 . - . ID=Thaps24876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ3];external_name=Thaps24876;logic_name=jgi_thaps3 chr14 ensembl transcript 622799 623964 . - . ID=Thaps24876;Parent=Thaps24876;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 622799 623341 . - 0 ID=Thaps24876;Parent=Thaps24876;rank=2 chr14 . exon 622799 623341 . - . ID=Thaps24876.2;Parent=Thaps24876;constitutive=1;rank=2 chr14 . CDS 623521 623964 . - 0 ID=Thaps24876;Parent=Thaps24876;rank=1 chr14 . exon 623521 623964 . - . ID=Thaps24876.1;Parent=Thaps24876;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 620001 621014 . - . ID=Thaps9878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ2];external_name=Thaps9878;logic_name=jgi_thaps3 chr14 ensembl transcript 620001 621014 . - . ID=Thaps9878;Parent=Thaps9878;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 620001 620297 . - 0 ID=Thaps9878;Parent=Thaps9878;rank=2 chr14 . exon 620001 620297 . - . ID=Thaps9878.2;Parent=Thaps9878;constitutive=1;rank=2 chr14 . CDS 620433 621014 . - 0 ID=Thaps9878;Parent=Thaps9878;rank=1 chr14 . exon 620433 621014 . - . ID=Thaps9878.1;Parent=Thaps9878;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 624307 626367 . + . ID=Thaps9880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ4];external_name=Thaps9880;logic_name=jgi_thaps3 chr14 ensembl transcript 624307 626367 . + . ID=Thaps9880;Parent=Thaps9880;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 624307 625065 . + 0 ID=Thaps9880;Parent=Thaps9880;rank=1 chr14 . exon 624307 625065 . + . ID=Thaps9880.1;Parent=Thaps9880;constitutive=1;rank=1 chr14 . CDS 625180 625301 . + 0 ID=Thaps9880;Parent=Thaps9880;rank=2 chr14 . exon 625180 625301 . + . ID=Thaps9880.2;Parent=Thaps9880;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 625380 626367 . + 0 ID=Thaps9880;Parent=Thaps9880;rank=3 chr14 . exon 625380 626367 . + . ID=Thaps9880.3;Parent=Thaps9880;constitutive=1;ensembl_end_phase=1;rank=3 chr14 ensembl protein_coding_gene 626451 627890 . - . ID=Thaps9881;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ5];external_name=Thaps9881;logic_name=jgi_thaps3 chr14 ensembl transcript 626451 627890 . - . ID=Thaps9881;Parent=Thaps9881;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 626451 627890 . - 0 ID=Thaps9881;Parent=Thaps9881;rank=1 chr14 . exon 626451 627890 . - . ID=Thaps9881.1;Parent=Thaps9881;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 628312 628911 . + . ID=Thaps9882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ6];external_name=Thaps9882;logic_name=jgi_thaps3 chr14 ensembl transcript 628312 628911 . + . ID=Thaps9882;Parent=Thaps9882;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 628312 628911 . + 0 ID=Thaps9882;Parent=Thaps9882;rank=1 chr14 . exon 628312 628911 . + . ID=Thaps9882.1;Parent=Thaps9882;constitutive=1;rank=1 chr14 . repeat_region 629998 631391 . - . description=Gypsy3I_TP chr14 . repeat_region 631377 631443 . - . description=Gypsy3I_TP chr14 . repeat_region 631444 631886 . - . description=Gypsy3LTR_TP chr14 . repeat_region 636931 636954 . ? . description=trf chr14 ensembl protein_coding_gene 636959 641496 . + . ID=Thaps24877;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ9];external_name=Thaps24877;logic_name=jgi_thaps3 chr14 ensembl transcript 636959 641496 . + . ID=Thaps24877;Parent=Thaps24877;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 636959 641441 . + 0 ID=Thaps24877;Parent=Thaps24877;rank=1 chr14 . exon 636959 641441 . + . ID=Thaps24877.1;Parent=Thaps24877;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 641480 641496 . + 0 ID=Thaps24877;Parent=Thaps24877;rank=2 chr14 ensembl protein_coding_gene 631975 632790 . + . ID=Thaps9883;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ7];external_name=Thaps9883;logic_name=jgi_thaps3 chr14 ensembl transcript 631975 632790 . + . ID=Thaps9883;Parent=Thaps9883;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 631975 632790 . + 0 ID=Thaps9883;Parent=Thaps9883;rank=1 chr14 . exon 631975 632790 . + . ID=Thaps9883.1;Parent=Thaps9883;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 632908 634795 . - . ID=Thaps9884;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCJ8];external_name=Thaps9884;logic_name=jgi_thaps3 chr14 ensembl transcript 632908 634795 . - . ID=Thaps9884;Parent=Thaps9884;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 632908 632945 . - 0 ID=Thaps9884;Parent=Thaps9884;rank=3 chr14 . exon 632908 632945 . - . ID=Thaps9884.3;Parent=Thaps9884;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 632983 633834 . - 0 ID=Thaps9884;Parent=Thaps9884;rank=2 chr14 . exon 632983 633834 . - . ID=Thaps9884.2;Parent=Thaps9884;constitutive=1;rank=2 chr14 . CDS 633859 634795 . - 0 ID=Thaps9884;Parent=Thaps9884;rank=1 chr14 . exon 633859 634795 . - . ID=Thaps9884.1;Parent=Thaps9884;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . exon 641480 641496 . + . ID=Thaps24877.2;Parent=Thaps24877;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 641678 644314 . - . ID=Thaps24878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK0];external_name=Thaps24878;logic_name=jgi_thaps3 chr14 ensembl transcript 641678 644314 . - . ID=Thaps24878;Parent=Thaps24878;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 641678 644314 . - 0 ID=Thaps24878;Parent=Thaps24878;rank=1 chr14 . exon 641678 644314 . - . ID=Thaps24878.1;Parent=Thaps24878;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 646083 646596 . - . ID=Thaps24879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK2];external_name=Thaps24879;logic_name=jgi_thaps3 chr14 ensembl transcript 646083 646596 . - . ID=Thaps24879;Parent=Thaps24879;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 646083 646088 . - 0 ID=Thaps24879;Parent=Thaps24879;rank=2 chr14 . exon 646083 646088 . - . ID=Thaps24879.2;Parent=Thaps24879;constitutive=1;rank=2 chr14 . CDS 646117 646596 . - 0 ID=Thaps24879;Parent=Thaps24879;rank=1 chr14 . exon 646117 646596 . - . ID=Thaps24879.1;Parent=Thaps24879;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 646840 648756 . + . ID=Thaps24880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK3];external_name=Thaps24880;logic_name=jgi_thaps3 chr14 ensembl transcript 646840 648756 . + . ID=Thaps24880;Parent=Thaps24880;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 646840 647202 . + 0 ID=Thaps24880;Parent=Thaps24880;rank=1 chr14 . exon 646840 647202 . + . ID=Thaps24880.1;Parent=Thaps24880;constitutive=1;rank=1 chr14 . CDS 647335 648756 . + 0 ID=Thaps24880;Parent=Thaps24880;rank=2 chr14 . exon 647335 648756 . + . ID=Thaps24880.2;Parent=Thaps24880;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 644720 645226 . + . ID=Thaps37559;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK1];external_name=Thaps37559;logic_name=jgi_thaps3 chr14 ensembl transcript 644720 645226 . + . ID=Thaps37559;Parent=Thaps37559;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 644720 645226 . + 0 ID=Thaps37559;Parent=Thaps37559;rank=1 chr14 . exon 644720 645226 . + . ID=Thaps37559.1;Parent=Thaps37559;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 649107 649480 . - . ID=Thaps37562;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK4];external_name=Thaps37562;logic_name=jgi_thaps3 chr14 ensembl transcript 649107 649480 . - . ID=Thaps37562;Parent=Thaps37562;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 649107 649322 . - 0 ID=Thaps37562;Parent=Thaps37562;rank=2 chr14 . exon 649107 649322 . - . ID=Thaps37562.2;Parent=Thaps37562;constitutive=1;rank=2 chr14 . CDS 649400 649480 . - 0 ID=Thaps37562;Parent=Thaps37562;rank=1 chr14 . repeat_region 650899 650949 . ? . description=dust chr14 . repeat_region 651405 651435 . ? . description=dust chr14 . repeat_region 657469 657511 . ? . description=trf chr14 . repeat_region 658594 658731 . ? . description=trf chr14 ensembl protein_coding_gene 652500 655999 . + . ID=Thaps264188;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK5];external_name=Thaps264188;logic_name=jgi_thaps3 chr14 ensembl transcript 652500 655999 . + . ID=Thaps264188;Parent=Thaps264188;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 652500 652594 . + 0 ID=Thaps264188;Parent=Thaps264188;rank=1 chr14 . exon 652500 652594 . + . ID=Thaps264188.1;Parent=Thaps264188;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 652640 652958 . + 0 ID=Thaps264188;Parent=Thaps264188;rank=2 chr14 . exon 652640 652958 . + . ID=Thaps264188.2;Parent=Thaps264188;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 653123 653425 . + 0 ID=Thaps264188;Parent=Thaps264188;rank=3 chr14 . exon 653123 653425 . + . ID=Thaps264188.3;Parent=Thaps264188;constitutive=1;rank=3 chr14 . CDS 653449 653464 . + 0 ID=Thaps264188;Parent=Thaps264188;rank=4 chr14 . exon 653449 653464 . + . ID=Thaps264188.4;Parent=Thaps264188;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 653538 654088 . + 0 ID=Thaps264188;Parent=Thaps264188;rank=5 chr14 . exon 653538 654088 . + . ID=Thaps264188.5;Parent=Thaps264188;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 654134 654415 . + 0 ID=Thaps264188;Parent=Thaps264188;rank=6 chr14 . exon 654134 654415 . + . ID=Thaps264188.6;Parent=Thaps264188;constitutive=1;rank=6 chr14 . CDS 654500 655712 . + 0 ID=Thaps264188;Parent=Thaps264188;rank=7 chr14 . exon 654500 655712 . + . ID=Thaps264188.7;Parent=Thaps264188;constitutive=1;ensembl_end_phase=1;rank=7 chr14 . CDS 655899 655999 . + 0 ID=Thaps264188;Parent=Thaps264188;rank=8 chr14 . exon 655899 655999 . + . ID=Thaps264188.8;Parent=Thaps264188;constitutive=1;ensembl_end_phase=2;rank=8 chr14 . exon 649400 649480 . - . ID=Thaps37562.1;Parent=Thaps37562;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 657185 659324 . + . ID=Thaps9892;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK6];external_name=Thaps9892;logic_name=jgi_thaps3 chr14 ensembl transcript 657185 659324 . + . ID=Thaps9892;Parent=Thaps9892;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 657185 658780 . + 0 ID=Thaps9892;Parent=Thaps9892;rank=1 chr14 . exon 657185 658780 . + . ID=Thaps9892.1;Parent=Thaps9892;constitutive=1;rank=1 chr14 . CDS 659003 659050 . + 0 ID=Thaps9892;Parent=Thaps9892;rank=2 chr14 . exon 659003 659050 . + . ID=Thaps9892.2;Parent=Thaps9892;constitutive=1;rank=2 chr14 . CDS 659217 659324 . + 0 ID=Thaps9892;Parent=Thaps9892;rank=3 chr14 ensembl protein_coding_gene 666236 667169 . - . ID=Thaps24882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK8];external_name=Thaps24882;logic_name=jgi_thaps3 chr14 ensembl transcript 666236 667169 . - . ID=Thaps24882;Parent=Thaps24882;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 666236 666291 . - 0 ID=Thaps24882;Parent=Thaps24882;rank=2 chr14 . exon 666236 666291 . - . ID=Thaps24882.2;Parent=Thaps24882;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 666383 667169 . - 0 ID=Thaps24882;Parent=Thaps24882;rank=1 chr14 . exon 666383 667169 . - . ID=Thaps24882.1;Parent=Thaps24882;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 667908 673577 . + . ID=Thaps24883;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK9];external_name=Thaps24883;logic_name=jgi_thaps3 chr14 ensembl transcript 667908 673577 . + . ID=Thaps24883;Parent=Thaps24883;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 667908 669721 . + 0 ID=Thaps24883;Parent=Thaps24883;rank=1 chr14 . exon 667908 669721 . + . ID=Thaps24883.1;Parent=Thaps24883;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 669809 669881 . + 0 ID=Thaps24883;Parent=Thaps24883;rank=2 chr14 . CDS 670217 670351 . + 0 ID=Thaps24883;Parent=Thaps24883;rank=3 chr14 . CDS 670492 672706 . + 0 ID=Thaps24883;Parent=Thaps24883;rank=4 chr14 . CDS 672787 673577 . + 0 ID=Thaps24883;Parent=Thaps24883;rank=5 chr14 ensembl protein_coding_gene 664210 665739 . + . ID=Thaps37280;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCK7];external_name=Thaps37280;logic_name=jgi_thaps3 chr14 ensembl transcript 664210 665739 . + . ID=Thaps37280;Parent=Thaps37280;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 664210 665031 . + 0 ID=Thaps37280;Parent=Thaps37280;rank=1 chr14 . exon 664210 665031 . + . ID=Thaps37280.1;Parent=Thaps37280;constitutive=1;rank=1 chr14 . CDS 665115 665475 . + 0 ID=Thaps37280;Parent=Thaps37280;rank=2 chr14 . exon 665115 665475 . + . ID=Thaps37280.2;Parent=Thaps37280;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 665549 665591 . + 0 ID=Thaps37280;Parent=Thaps37280;rank=3 chr14 . exon 665549 665591 . + . ID=Thaps37280.3;Parent=Thaps37280;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 665682 665739 . + 0 ID=Thaps37280;Parent=Thaps37280;rank=4 chr14 . exon 665682 665739 . + . ID=Thaps37280.4;Parent=Thaps37280;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . exon 659217 659324 . + . ID=Thaps9892.3;Parent=Thaps9892;constitutive=1;rank=3 chr14 . repeat_region 670929 670957 . ? . description=dust chr14 . repeat_region 675332 675347 . ? . description=dust chr14 . exon 669809 669881 . + . ID=Thaps24883.2;Parent=Thaps24883;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . exon 670217 670351 . + . ID=Thaps24883.3;Parent=Thaps24883;constitutive=1;rank=3 chr14 . exon 670492 672706 . + . ID=Thaps24883.4;Parent=Thaps24883;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . exon 672787 673577 . + . ID=Thaps24883.5;Parent=Thaps24883;constitutive=1;ensembl_end_phase=2;rank=5 chr14 ensembl protein_coding_gene 675179 677247 . - . ID=Thaps264191;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCL0];external_name=Thaps264191;logic_name=jgi_thaps3 chr14 ensembl transcript 675179 677247 . - . ID=Thaps264191;Parent=Thaps264191;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 675179 675283 . - 0 ID=Thaps264191;Parent=Thaps264191;rank=5 chr14 . exon 675179 675283 . - . ID=Thaps264191.5;Parent=Thaps264191;constitutive=1;rank=5 chr14 . CDS 675372 675999 . - 0 ID=Thaps264191;Parent=Thaps264191;rank=4 chr14 . exon 675372 675999 . - . ID=Thaps264191.4;Parent=Thaps264191;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 676094 676403 . - 0 ID=Thaps264191;Parent=Thaps264191;rank=3 chr14 . exon 676094 676403 . - . ID=Thaps264191.3;Parent=Thaps264191;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 676653 676745 . - 0 ID=Thaps264191;Parent=Thaps264191;rank=2 chr14 . exon 676653 676745 . - . ID=Thaps264191.2;Parent=Thaps264191;constitutive=1;rank=2 chr14 . CDS 677124 677247 . - 0 ID=Thaps264191;Parent=Thaps264191;rank=1 chr14 . exon 677124 677247 . - . ID=Thaps264191.1;Parent=Thaps264191;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 677950 679533 . + . ID=Thaps269776;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCL1];external_name=Thaps269776;logic_name=jgi_thaps3 chr14 ensembl transcript 677950 679533 . + . ID=Thaps269776;Parent=Thaps269776;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 677950 678587 . + 0 ID=Thaps269776;Parent=Thaps269776;rank=1 chr14 . exon 677950 678587 . + . ID=Thaps269776.1;Parent=Thaps269776;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 678690 679533 . + 0 ID=Thaps269776;Parent=Thaps269776;rank=2 chr14 . exon 678690 679533 . + . ID=Thaps269776.2;Parent=Thaps269776;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 681861 683268 . + . ID=Thaps24887;biotype=protein_coding;description=Phosphoadenosine-phosphosulphate reductase [Source:UniProtKB/TrEMBL%3BAcc:B8CCL3];external_name=Thaps24887;logic_name=jgi_thaps3 chr14 ensembl transcript 681861 683268 . + . ID=Thaps24887;Parent=Thaps24887;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 681861 682642 . + 0 ID=Thaps24887;Parent=Thaps24887;rank=1 chr14 . exon 681861 682642 . + . ID=Thaps24887.1;Parent=Thaps24887;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 682734 683268 . + 0 ID=Thaps24887;Parent=Thaps24887;rank=2 chr14 . exon 682734 683268 . + . ID=Thaps24887.2;Parent=Thaps24887;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 685889 686995 . + . ID=Thaps24888;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCL5];external_name=Thaps24888;logic_name=jgi_thaps3 chr14 ensembl transcript 685889 686995 . + . ID=Thaps24888;Parent=Thaps24888;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 685889 686995 . + 0 ID=Thaps24888;Parent=Thaps24888;rank=1 chr14 . exon 685889 686995 . + . ID=Thaps24888.1;Parent=Thaps24888;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 679649 681628 . - . ID=Thaps269777;biotype=protein_coding;description=Putative uncharacterized protein LTA4 [Source:UniProtKB/TrEMBL%3BAcc:B8CCL2];external_name=LTA4;logic_name=jgi_thaps3 chr14 ensembl transcript 679649 681628 . - . ID=Thaps269777;Parent=Thaps269777;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 679649 681628 . - 0 ID=Thaps269777;Parent=Thaps269777;rank=1 chr14 . exon 679649 681628 . - . ID=Thaps269777.1;Parent=Thaps269777;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 683811 685421 . + . ID=Thaps37471;biotype=protein_coding;description=Dihydropteroate synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CCL4];external_name=DPS1;logic_name=jgi_thaps3 chr14 ensembl transcript 683811 685421 . + . ID=Thaps37471;Parent=Thaps37471;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 683811 684726 . + 0 ID=Thaps37471;Parent=Thaps37471;rank=1 chr14 . exon 683811 684726 . + . ID=Thaps37471.1;Parent=Thaps37471;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 684808 685421 . + 0 ID=Thaps37471;Parent=Thaps37471;rank=2 chr14 . exon 684808 685421 . + . ID=Thaps37471.2;Parent=Thaps37471;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 688505 689833 . + . ID=Thaps9902;biotype=protein_coding;description=Putative uncharacterized protein bZIP7 [Source:UniProtKB/TrEMBL%3BAcc:B8CCL6];external_name=BZIP7;logic_name=jgi_thaps3 chr14 ensembl transcript 688505 689833 . + . ID=Thaps9902;Parent=Thaps9902;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 688505 689833 . + 0 ID=Thaps9902;Parent=Thaps9902;rank=1 chr14 . exon 688505 689833 . + . ID=Thaps9902.1;Parent=Thaps9902;constitutive=1;rank=1 chr14 . repeat_region 690275 690284 . ? . description=dust chr14 . biological_region 697679 697681 0.999 - . logic_name=eponine chr14 . repeat_region 698140 698153 . ? . description=dust chr14 . repeat_region 698666 698689 . ? . description=trf chr14 ensembl protein_coding_gene 693081 694147 . + . ID=Thaps269779;biotype=protein_coding;description=40S ribosomal protein S6 [Source:UniProtKB/TrEMBL%3BAcc:B8CCL8];external_name=RS6;logic_name=jgi_thaps3 chr14 ensembl transcript 693081 694147 . + . ID=Thaps269779;Parent=Thaps269779;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 693081 693086 . + 0 ID=Thaps269779;Parent=Thaps269779;rank=1 chr14 . exon 693081 693086 . + . ID=Thaps269779.1;Parent=Thaps269779;constitutive=1;rank=1 chr14 . CDS 693422 694147 . + 0 ID=Thaps269779;Parent=Thaps269779;rank=2 chr14 . exon 693422 694147 . + . ID=Thaps269779.2;Parent=Thaps269779;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 695835 697775 . - . ID=Thaps269780;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCL9];external_name=Thaps269780;logic_name=jgi_thaps3 chr14 ensembl transcript 695835 697775 . - . ID=Thaps269780;Parent=Thaps269780;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 695835 696385 . - 0 ID=Thaps269780;Parent=Thaps269780;rank=3 chr14 . exon 695835 696385 . - . ID=Thaps269780.3;Parent=Thaps269780;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 696455 696971 . - 0 ID=Thaps269780;Parent=Thaps269780;rank=2 chr14 . exon 696455 696971 . - . ID=Thaps269780.2;Parent=Thaps269780;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 697104 697775 . - 0 ID=Thaps269780;Parent=Thaps269780;rank=1 chr14 . exon 697104 697775 . - . ID=Thaps269780.1;Parent=Thaps269780;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 698489 699191 . - . ID=Thaps37430;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM0];external_name=Thaps37430;logic_name=jgi_thaps3 chr14 ensembl transcript 698489 699191 . - . ID=Thaps37430;Parent=Thaps37430;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 698489 698663 . - 0 ID=Thaps37430;Parent=Thaps37430;rank=2 chr14 . exon 698489 698663 . - . ID=Thaps37430.2;Parent=Thaps37430;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 699040 699191 . - 0 ID=Thaps37430;Parent=Thaps37430;rank=1 chr14 . exon 699040 699191 . - . ID=Thaps37430.1;Parent=Thaps37430;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 690420 691743 . + . ID=Thaps9903;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCL7];external_name=Thaps9903;logic_name=jgi_thaps3 chr14 ensembl transcript 690420 691743 . + . ID=Thaps9903;Parent=Thaps9903;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 690420 690689 . + 0 ID=Thaps9903;Parent=Thaps9903;rank=1 chr14 . exon 690420 690689 . + . ID=Thaps9903.1;Parent=Thaps9903;constitutive=1;rank=1 chr14 . CDS 690806 691411 . + 0 ID=Thaps9903;Parent=Thaps9903;rank=2 chr14 . exon 690806 691411 . + . ID=Thaps9903.2;Parent=Thaps9903;constitutive=1;rank=2 chr14 . CDS 691513 691743 . + 0 ID=Thaps9903;Parent=Thaps9903;rank=3 chr14 . exon 691513 691743 . + . ID=Thaps9903.3;Parent=Thaps9903;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 699646 703762 . + . ID=Thaps24891;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM1];external_name=Thaps24891;logic_name=jgi_thaps3 chr14 ensembl transcript 699646 703762 . + . ID=Thaps24891;Parent=Thaps24891;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 699646 700542 . + 0 ID=Thaps24891;Parent=Thaps24891;rank=1 chr14 . exon 699646 700542 . + . ID=Thaps24891.1;Parent=Thaps24891;constitutive=1;rank=1 chr14 . CDS 700640 701800 . + 0 ID=Thaps24891;Parent=Thaps24891;rank=2 chr14 . exon 700640 701800 . + . ID=Thaps24891.2;Parent=Thaps24891;constitutive=1;rank=2 chr14 . CDS 701910 702863 . + 0 ID=Thaps24891;Parent=Thaps24891;rank=3 chr14 . exon 701910 702863 . + . ID=Thaps24891.3;Parent=Thaps24891;constitutive=1;rank=3 chr14 . CDS 702947 703762 . + 0 ID=Thaps24891;Parent=Thaps24891;rank=4 chr14 . exon 702947 703762 . + . ID=Thaps24891.4;Parent=Thaps24891;constitutive=1;rank=4 chr14 ensembl protein_coding_gene 703835 705800 . - . ID=Thaps9907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM2];external_name=Thaps9907;logic_name=jgi_thaps3 chr14 ensembl transcript 703835 705800 . - . ID=Thaps9907;Parent=Thaps9907;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 703835 704513 . - 0 ID=Thaps9907;Parent=Thaps9907;rank=2 chr14 . exon 703835 704513 . - . ID=Thaps9907.2;Parent=Thaps9907;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 704599 705800 . - 0 ID=Thaps9907;Parent=Thaps9907;rank=1 chr14 . exon 704599 705800 . - . ID=Thaps9907.1;Parent=Thaps9907;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 706618 708030 . + . ID=Thaps9908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM3];external_name=Thaps9908;logic_name=jgi_thaps3 chr14 ensembl transcript 706618 708030 . + . ID=Thaps9908;Parent=Thaps9908;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 706618 708030 . + 0 ID=Thaps9908;Parent=Thaps9908;rank=1 chr14 . exon 706618 708030 . + . ID=Thaps9908.1;Parent=Thaps9908;constitutive=1;rank=1 chr14 . repeat_region 712747 712768 . ? . description=dust chr14 ensembl protein_coding_gene 718818 722409 . + . ID=Thaps24893;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM8];external_name=Thaps24893;logic_name=jgi_thaps3 chr14 ensembl transcript 718818 722409 . + . ID=Thaps24893;Parent=Thaps24893;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 718818 718841 . + 0 ID=Thaps24893;Parent=Thaps24893;rank=1 chr14 . exon 718818 718841 . + . ID=Thaps24893.1;Parent=Thaps24893;constitutive=1;rank=1 chr14 . CDS 718907 721425 . + 0 ID=Thaps24893;Parent=Thaps24893;rank=2 chr14 . exon 718907 721425 . + . ID=Thaps24893.2;Parent=Thaps24893;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 721507 722103 . + 0 ID=Thaps24893;Parent=Thaps24893;rank=3 chr14 . CDS 722199 722409 . + 0 ID=Thaps24893;Parent=Thaps24893;rank=4 chr14 ensembl protein_coding_gene 711254 711805 . - . ID=Thaps37366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM4];external_name=Thaps37366;logic_name=jgi_thaps3 chr14 ensembl transcript 711254 711805 . - . ID=Thaps37366;Parent=Thaps37366;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 711254 711664 . - 0 ID=Thaps37366;Parent=Thaps37366;rank=2 chr14 . exon 711254 711664 . - . ID=Thaps37366.2;Parent=Thaps37366;constitutive=1;rank=2 chr14 . CDS 711710 711805 . - 0 ID=Thaps37366;Parent=Thaps37366;rank=1 chr14 . exon 711710 711805 . - . ID=Thaps37366.1;Parent=Thaps37366;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 711973 713568 . - . ID=Thaps9910;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM5];external_name=Thaps9910;logic_name=jgi_thaps3 chr14 ensembl transcript 711973 713568 . - . ID=Thaps9910;Parent=Thaps9910;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 711973 713568 . - 0 ID=Thaps9910;Parent=Thaps9910;rank=1 chr14 . exon 711973 713568 . - . ID=Thaps9910.1;Parent=Thaps9910;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 714173 714984 . + . ID=Thaps9911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM6];external_name=Thaps9911;logic_name=jgi_thaps3 chr14 ensembl transcript 714173 714984 . + . ID=Thaps9911;Parent=Thaps9911;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 714173 714193 . + 0 ID=Thaps9911;Parent=Thaps9911;rank=1 chr14 . exon 714173 714193 . + . ID=Thaps9911.1;Parent=Thaps9911;constitutive=1;rank=1 chr14 . CDS 714283 714984 . + 0 ID=Thaps9911;Parent=Thaps9911;rank=2 chr14 . exon 714283 714984 . + . ID=Thaps9911.2;Parent=Thaps9911;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 715081 718287 . - . ID=Thaps9912;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM7];external_name=Thaps9912;logic_name=jgi_thaps3 chr14 ensembl transcript 715081 718287 . - . ID=Thaps9912;Parent=Thaps9912;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 715081 718287 . - 0 ID=Thaps9912;Parent=Thaps9912;rank=1 chr14 . exon 715081 718287 . - . ID=Thaps9912.1;Parent=Thaps9912;constitutive=1;rank=1 chr14 . exon 721507 722103 . + . ID=Thaps24893.3;Parent=Thaps24893;constitutive=1;rank=3 chr14 . exon 722199 722409 . + . ID=Thaps24893.4;Parent=Thaps24893;constitutive=1;ensembl_end_phase=1;rank=4 chr14 ensembl protein_coding_gene 722871 725223 . - . ID=Thaps24894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCM9];external_name=Thaps24894;logic_name=jgi_thaps3 chr14 ensembl transcript 722871 725223 . - . ID=Thaps24894;Parent=Thaps24894;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 722871 723447 . - 0 ID=Thaps24894;Parent=Thaps24894;rank=4 chr14 . exon 722871 723447 . - . ID=Thaps24894.4;Parent=Thaps24894;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 723528 724520 . - 0 ID=Thaps24894;Parent=Thaps24894;rank=3 chr14 . exon 723528 724520 . - . ID=Thaps24894.3;Parent=Thaps24894;constitutive=1;rank=3 chr14 . CDS 724604 724687 . - 0 ID=Thaps24894;Parent=Thaps24894;rank=2 chr14 . exon 724604 724687 . - . ID=Thaps24894.2;Parent=Thaps24894;constitutive=1;rank=2 chr14 . CDS 724784 725223 . - 0 ID=Thaps24894;Parent=Thaps24894;rank=1 chr14 . exon 724784 725223 . - . ID=Thaps24894.1;Parent=Thaps24894;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 728075 728863 . - . ID=Thaps37336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCN1];external_name=Thaps37336;logic_name=jgi_thaps3 chr14 ensembl transcript 728075 728863 . - . ID=Thaps37336;Parent=Thaps37336;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 728075 728143 . - 0 ID=Thaps37336;Parent=Thaps37336;rank=2 chr14 . exon 728075 728143 . - . ID=Thaps37336.2;Parent=Thaps37336;constitutive=1;rank=2 chr14 . CDS 728225 728863 . - 0 ID=Thaps37336;Parent=Thaps37336;rank=1 chr14 . exon 728225 728863 . - . ID=Thaps37336.1;Parent=Thaps37336;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 726049 726477 . + . ID=Thaps37564;biotype=protein_coding;description=Pre-mrna splicing protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCN0];external_name=Thaps37564;logic_name=jgi_thaps3 chr14 ensembl transcript 726049 726477 . + . ID=Thaps37564;Parent=Thaps37564;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 726049 726477 . + 0 ID=Thaps37564;Parent=Thaps37564;rank=1 chr14 . exon 726049 726477 . + . ID=Thaps37564.1;Parent=Thaps37564;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 738896 740118 . + . ID=Thaps264201;biotype=protein_coding;description=RL8%2C ribosomal protein 8 [Source:UniProtKB/TrEMBL%3BAcc:B8CCN2];external_name=RL8;logic_name=jgi_thaps3 chr14 ensembl transcript 738896 740118 . + . ID=Thaps264201;Parent=Thaps264201;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 738896 738913 . + 0 ID=Thaps264201;Parent=Thaps264201;rank=1 chr14 . exon 738896 738913 . + . ID=Thaps264201.1;Parent=Thaps264201;constitutive=1;rank=1 chr14 . CDS 739365 740118 . + 0 ID=Thaps264201;Parent=Thaps264201;rank=2 chr14 . repeat_region 748420 748466 . ? . description=dust chr14 . exon 739365 740118 . + . ID=Thaps264201.2;Parent=Thaps264201;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 744781 746680 . + . ID=Thaps37294;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCN5];external_name=Thaps37294;logic_name=jgi_thaps3 chr14 ensembl transcript 744781 746680 . + . ID=Thaps37294;Parent=Thaps37294;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 744781 745601 . + 0 ID=Thaps37294;Parent=Thaps37294;rank=1 chr14 . exon 744781 745601 . + . ID=Thaps37294.1;Parent=Thaps37294;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 745684 745708 . + 0 ID=Thaps37294;Parent=Thaps37294;rank=2 chr14 . exon 745684 745708 . + . ID=Thaps37294.2;Parent=Thaps37294;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 745799 745916 . + 0 ID=Thaps37294;Parent=Thaps37294;rank=3 chr14 . exon 745799 745916 . + . ID=Thaps37294.3;Parent=Thaps37294;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 745950 746680 . + 0 ID=Thaps37294;Parent=Thaps37294;rank=4 chr14 . exon 745950 746680 . + . ID=Thaps37294.4;Parent=Thaps37294;constitutive=1;ensembl_end_phase=2;rank=4 chr14 ensembl protein_coding_gene 742358 743262 . + . ID=Thaps37497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCN4];external_name=Thaps37497;logic_name=jgi_thaps3 chr14 ensembl transcript 742358 743262 . + . ID=Thaps37497;Parent=Thaps37497;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 742358 742584 . + 0 ID=Thaps37497;Parent=Thaps37497;rank=1 chr14 . exon 742358 742584 . + . ID=Thaps37497.1;Parent=Thaps37497;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 742671 743262 . + 0 ID=Thaps37497;Parent=Thaps37497;rank=2 chr14 . exon 742671 743262 . + . ID=Thaps37497.2;Parent=Thaps37497;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 740274 741218 . - . ID=Thaps9918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCN3];external_name=Thaps9918;logic_name=jgi_thaps3 chr14 ensembl transcript 740274 741218 . - . ID=Thaps9918;Parent=Thaps9918;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 740274 741218 . - 0 ID=Thaps9918;Parent=Thaps9918;rank=1 chr14 . exon 740274 741218 . - . ID=Thaps9918.1;Parent=Thaps9918;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 747232 747632 . - . ID=Thaps9921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCN6];external_name=Thaps9921;logic_name=jgi_thaps3 chr14 ensembl transcript 747232 747632 . - . ID=Thaps9921;Parent=Thaps9921;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 747232 747396 . - 0 ID=Thaps9921;Parent=Thaps9921;rank=2 chr14 . exon 747232 747396 . - . ID=Thaps9921.2;Parent=Thaps9921;constitutive=1;rank=2 chr14 . CDS 747471 747632 . - 0 ID=Thaps9921;Parent=Thaps9921;rank=1 chr14 . exon 747471 747632 . - . ID=Thaps9921.1;Parent=Thaps9921;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 747986 750346 . + . ID=Thaps9922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCN7];external_name=Thaps9922;logic_name=jgi_thaps3 chr14 ensembl transcript 747986 750346 . + . ID=Thaps9922;Parent=Thaps9922;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 747986 750346 . + 0 ID=Thaps9922;Parent=Thaps9922;rank=1 chr14 . exon 747986 750346 . + . ID=Thaps9922.1;Parent=Thaps9922;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 750438 752312 . - . ID=Thaps24897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCN8];external_name=Thaps24897;logic_name=jgi_thaps3 chr14 ensembl transcript 750438 752312 . - . ID=Thaps24897;Parent=Thaps24897;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 750438 752312 . - 0 ID=Thaps24897;Parent=Thaps24897;rank=1 chr14 . exon 750438 752312 . - . ID=Thaps24897.1;Parent=Thaps24897;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 757735 759220 . - . ID=Thaps264206;biotype=protein_coding;description=26S proteasome regulatory ATPase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CCP1];external_name=RPT1;logic_name=jgi_thaps3 chr14 ensembl transcript 757735 759220 . - . ID=Thaps264206;Parent=Thaps264206;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 757735 757746 . - 0 ID=Thaps264206;Parent=Thaps264206;rank=3 chr14 . exon 757735 757746 . - . ID=Thaps264206.3;Parent=Thaps264206;constitutive=1;rank=3 chr14 . CDS 757851 758476 . - 0 ID=Thaps264206;Parent=Thaps264206;rank=2 chr14 . exon 757851 758476 . - . ID=Thaps264206.2;Parent=Thaps264206;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 758566 759220 . - 0 ID=Thaps264206;Parent=Thaps264206;rank=1 chr14 . exon 758566 759220 . - . ID=Thaps264206.1;Parent=Thaps264206;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 752841 754342 . + . ID=Thaps37328;biotype=protein_coding;description=DNA primase [Source:UniProtKB/TrEMBL%3BAcc:B8CCN9];external_name=Thaps37328;logic_name=jgi_thaps3 chr14 ensembl transcript 752841 754342 . + . ID=Thaps37328;Parent=Thaps37328;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 752841 752930 . + 0 ID=Thaps37328;Parent=Thaps37328;rank=1 chr14 . exon 752841 752930 . + . ID=Thaps37328.1;Parent=Thaps37328;constitutive=1;rank=1 chr14 . CDS 753125 754342 . + 0 ID=Thaps37328;Parent=Thaps37328;rank=2 chr14 . exon 753125 754342 . + . ID=Thaps37328.2;Parent=Thaps37328;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 755042 755641 . - . ID=Thaps37485;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCP0];external_name=Thaps37485;logic_name=jgi_thaps3 chr14 ensembl transcript 755042 755641 . - . ID=Thaps37485;Parent=Thaps37485;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 755042 755641 . - 0 ID=Thaps37485;Parent=Thaps37485;rank=1 chr14 . exon 755042 755641 . - . ID=Thaps37485.1;Parent=Thaps37485;constitutive=1;rank=1 chr14 . repeat_region 759353 759361 . ? . description=dust chr14 . repeat_region 764666 764698 . ? . description=trf chr14 . repeat_region 765163 765173 . ? . description=dust chr14 . repeat_region 767284 767297 . ? . description=dust chr14 ensembl protein_coding_gene 759789 761582 . + . ID=Thaps24900;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCP2];external_name=Thaps24900;logic_name=jgi_thaps3 chr14 ensembl transcript 759789 761582 . + . ID=Thaps24900;Parent=Thaps24900;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 759789 761582 . + 0 ID=Thaps24900;Parent=Thaps24900;rank=1 chr14 . exon 759789 761582 . + . ID=Thaps24900.1;Parent=Thaps24900;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 765300 767039 . + . ID=Thaps24901;biotype=protein_coding;description=Methionyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CCP4];external_name=MTS2_2;logic_name=jgi_thaps3 chr14 ensembl transcript 765300 767039 . + . ID=Thaps24901;Parent=Thaps24901;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 765300 767039 . + 0 ID=Thaps24901;Parent=Thaps24901;rank=1 chr14 . exon 765300 767039 . + . ID=Thaps24901.1;Parent=Thaps24901;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 767718 770191 . + . ID=Thaps24902;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCP5];external_name=Thaps24902;logic_name=jgi_thaps3 chr14 ensembl transcript 767718 770191 . + . ID=Thaps24902;Parent=Thaps24902;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 767718 768553 . + 0 ID=Thaps24902;Parent=Thaps24902;rank=1 chr14 . exon 767718 768553 . + . ID=Thaps24902.1;Parent=Thaps24902;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 768650 769809 . + 0 ID=Thaps24902;Parent=Thaps24902;rank=2 chr14 . exon 768650 769809 . + . ID=Thaps24902.2;Parent=Thaps24902;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 769950 770191 . + 0 ID=Thaps24902;Parent=Thaps24902;rank=3 chr14 ensembl protein_coding_gene 764771 764955 . - . ID=Thaps264208;biotype=protein_coding;description=DnaJ-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCP3];external_name=Thaps264208;logic_name=jgi_thaps3 chr14 ensembl transcript 764771 764955 . - . ID=Thaps264208;Parent=Thaps264208;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 764771 764955 . - 0 ID=Thaps264208;Parent=Thaps264208;rank=1 chr14 . exon 764771 764955 . - . ID=Thaps264208.1;Parent=Thaps264208;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . exon 769950 770191 . + . ID=Thaps24902.3;Parent=Thaps24902;constitutive=1;ensembl_end_phase=2;rank=3 chr14 ensembl protein_coding_gene 772671 773645 . + . ID=Thaps24904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCP7];external_name=Thaps24904;logic_name=jgi_thaps3 chr14 ensembl transcript 772671 773645 . + . ID=Thaps24904;Parent=Thaps24904;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 772671 772799 . + 0 ID=Thaps24904;Parent=Thaps24904;rank=1 chr14 . exon 772671 772799 . + . ID=Thaps24904.1;Parent=Thaps24904;constitutive=1;rank=1 chr14 . CDS 772953 773645 . + 0 ID=Thaps24904;Parent=Thaps24904;rank=2 chr14 . exon 772953 773645 . + . ID=Thaps24904.2;Parent=Thaps24904;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 775330 776241 . + . ID=Thaps24906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCP9];external_name=Thaps24906;logic_name=jgi_thaps3 chr14 ensembl transcript 775330 776241 . + . ID=Thaps24906;Parent=Thaps24906;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 775330 775614 . + 0 ID=Thaps24906;Parent=Thaps24906;rank=1 chr14 . exon 775330 775614 . + . ID=Thaps24906.1;Parent=Thaps24906;constitutive=1;rank=1 chr14 . CDS 775709 776194 . + 0 ID=Thaps24906;Parent=Thaps24906;rank=2 chr14 . exon 775709 776194 . + . ID=Thaps24906.2;Parent=Thaps24906;constitutive=1;rank=2 chr14 . CDS 776233 776241 . + 0 ID=Thaps24906;Parent=Thaps24906;rank=3 chr14 . exon 776233 776241 . + . ID=Thaps24906.3;Parent=Thaps24906;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 776394 778920 . - . ID=Thaps24907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCQ0];external_name=Thaps24907;logic_name=jgi_thaps3 chr14 ensembl transcript 776394 778920 . - . ID=Thaps24907;Parent=Thaps24907;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 776394 776626 . - 0 ID=Thaps24907;Parent=Thaps24907;rank=3 chr14 . exon 776394 776626 . - . ID=Thaps24907.3;Parent=Thaps24907;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 776718 777699 . - 0 ID=Thaps24907;Parent=Thaps24907;rank=2 chr14 . exon 776718 777699 . - . ID=Thaps24907.2;Parent=Thaps24907;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 777994 778920 . - 0 ID=Thaps24907;Parent=Thaps24907;rank=1 chr14 . exon 777994 778920 . - . ID=Thaps24907.1;Parent=Thaps24907;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 770462 771637 . - . ID=Thaps37327;biotype=protein_coding;description=tRNA-methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CCP6];external_name=Thaps37327;logic_name=jgi_thaps3 chr14 ensembl transcript 770462 771637 . - . ID=Thaps37327;Parent=Thaps37327;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 770462 771637 . - 0 ID=Thaps37327;Parent=Thaps37327;rank=1 chr14 . exon 770462 771637 . - . ID=Thaps37327.1;Parent=Thaps37327;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 774276 775008 . - . ID=Thaps42447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCP8];external_name=Thaps42447;logic_name=jgi_thaps3 chr14 ensembl transcript 774276 775008 . - . ID=Thaps42447;Parent=Thaps42447;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 774276 774461 . - 0 ID=Thaps42447;Parent=Thaps42447;rank=3 chr14 . exon 774276 774461 . - . ID=Thaps42447.3;Parent=Thaps42447;constitutive=1;rank=3 chr14 . CDS 774544 774577 . - 0 ID=Thaps42447;Parent=Thaps42447;rank=2 chr14 . exon 774544 774577 . - . ID=Thaps42447.2;Parent=Thaps42447;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 774701 775008 . - 0 ID=Thaps42447;Parent=Thaps42447;rank=1 chr14 . exon 774701 775008 . - . ID=Thaps42447.1;Parent=Thaps42447;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . repeat_region 786125 786169 . ? . description=dust chr14 ensembl protein_coding_gene 782858 784500 . - . ID=Thaps24910;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCQ2];external_name=Thaps24910;logic_name=jgi_thaps3 chr14 ensembl transcript 782858 784500 . - . ID=Thaps24910;Parent=Thaps24910;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 782858 784062 . - 0 ID=Thaps24910;Parent=Thaps24910;rank=2 chr14 . exon 782858 784062 . - . ID=Thaps24910.2;Parent=Thaps24910;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 784299 784500 . - 0 ID=Thaps24910;Parent=Thaps24910;rank=1 chr14 . exon 784299 784500 . - . ID=Thaps24910.1;Parent=Thaps24910;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 781615 782607 . - . ID=Thaps269792;biotype=protein_coding;description=Annexin [Source:UniProtKB/TrEMBL%3BAcc:B8CCQ1];external_name=ANX1;logic_name=jgi_thaps3 chr14 ensembl transcript 781615 782607 . - . ID=Thaps269792;Parent=Thaps269792;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 781615 782607 . - 0 ID=Thaps269792;Parent=Thaps269792;rank=1 chr14 . exon 781615 782607 . - . ID=Thaps269792.1;Parent=Thaps269792;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 784717 785868 . + . ID=Thaps30075;biotype=protein_coding;description=Proteasome subunit alpha type [Source:UniProtKB/TrEMBL%3BAcc:B8CCQ3];external_name=PSA5;logic_name=jgi_thaps3 chr14 ensembl transcript 784717 785868 . + . ID=Thaps30075;Parent=Thaps30075;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 784717 785059 . + 0 ID=Thaps30075;Parent=Thaps30075;rank=1 chr14 . exon 784717 785059 . + . ID=Thaps30075.1;Parent=Thaps30075;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 785477 785868 . + 0 ID=Thaps30075;Parent=Thaps30075;rank=2 chr14 . exon 785477 785868 . + . ID=Thaps30075.2;Parent=Thaps30075;constitutive=1;ensembl_end_phase=2;rank=2 chr14 ensembl protein_coding_gene 786048 788917 . - . ID=Thaps9941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCQ4];external_name=Thaps9941;logic_name=jgi_thaps3 chr14 ensembl transcript 786048 788917 . - . ID=Thaps9941;Parent=Thaps9941;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 786048 786226 . - 0 ID=Thaps9941;Parent=Thaps9941;rank=2 chr14 . exon 786048 786226 . - . ID=Thaps9941.2;Parent=Thaps9941;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 786253 788917 . - 0 ID=Thaps9941;Parent=Thaps9941;rank=1 chr14 . exon 786253 788917 . - . ID=Thaps9941.1;Parent=Thaps9941;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 794367 795107 . + . ID=Thaps37539;biotype=protein_coding;external_name=Thaps37539;logic_name=jgi_thaps3 chr14 ensembl transcript 794367 795107 . + . ID=Thaps37539;Parent=Thaps37539;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 794367 794450 . + 0 ID=Thaps37539;Parent=Thaps37539;rank=1 chr14 . exon 794367 794450 . + . ID=Thaps37539.1;Parent=Thaps37539;constitutive=1;rank=1 chr14 . CDS 794913 795107 . + 0 ID=Thaps37539;Parent=Thaps37539;rank=2 chr14 . exon 794913 795107 . + . ID=Thaps37539.2;Parent=Thaps37539;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 791380 792038 . + . ID=Thaps42457;biotype=protein_coding;description=RS25%2C ribosomal protein 25 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CCQ5];external_name=RS25;logic_name=jgi_thaps3 chr14 ensembl transcript 791380 792038 . + . ID=Thaps42457;Parent=Thaps42457;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 791380 791382 . + 0 ID=Thaps42457;Parent=Thaps42457;rank=1 chr14 . exon 791380 791382 . + . ID=Thaps42457.1;Parent=Thaps42457;constitutive=1;rank=1 chr14 . CDS 791703 792038 . + 0 ID=Thaps42457;Parent=Thaps42457;rank=2 chr14 . exon 791703 792038 . + . ID=Thaps42457.2;Parent=Thaps42457;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 792823 793881 . - . ID=Thaps9943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCQ6];external_name=Thaps9943;logic_name=jgi_thaps3 chr14 ensembl transcript 792823 793881 . - . ID=Thaps9943;Parent=Thaps9943;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 792823 793881 . - 0 ID=Thaps9943;Parent=Thaps9943;rank=1 chr14 . exon 792823 793881 . - . ID=Thaps9943.1;Parent=Thaps9943;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 797020 799867 . - . ID=Thaps9945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCQ8];external_name=Thaps9945;logic_name=jgi_thaps3 chr14 ensembl transcript 797020 799867 . - . ID=Thaps9945;Parent=Thaps9945;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 797020 797976 . - 0 ID=Thaps9945;Parent=Thaps9945;rank=2 chr14 . exon 797020 797976 . - . ID=Thaps9945.2;Parent=Thaps9945;constitutive=1;rank=2 chr14 . CDS 798062 799867 . - 0 ID=Thaps9945;Parent=Thaps9945;rank=1 chr14 . exon 798062 799867 . - . ID=Thaps9945.1;Parent=Thaps9945;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 804546 807809 . + . ID=Thaps264222;biotype=protein_coding;description=DNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8CCQ9];external_name=Thaps264222;logic_name=jgi_thaps3 chr14 ensembl transcript 804546 807809 . + . ID=Thaps264222;Parent=Thaps264222;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 804546 804660 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=1 chr14 . exon 804546 804660 . + . ID=Thaps264222.1;Parent=Thaps264222;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 804742 804918 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=2 chr14 . exon 804742 804918 . + . ID=Thaps264222.2;Parent=Thaps264222;constitutive=1;rank=2 chr14 . CDS 804956 804976 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=3 chr14 . exon 804956 804976 . + . ID=Thaps264222.3;Parent=Thaps264222;constitutive=1;rank=3 chr14 . CDS 804997 805019 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=4 chr14 . exon 804997 805019 . + . ID=Thaps264222.4;Parent=Thaps264222;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 805107 805169 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=5 chr14 . exon 805107 805169 . + . ID=Thaps264222.5;Parent=Thaps264222;constitutive=1;rank=5 chr14 . CDS 805244 805534 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=6 chr14 . exon 805244 805534 . + . ID=Thaps264222.6;Parent=Thaps264222;constitutive=1;rank=6 chr14 . CDS 805712 805916 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=7 chr14 . exon 805712 805916 . + . ID=Thaps264222.7;Parent=Thaps264222;constitutive=1;ensembl_end_phase=1;rank=7 chr14 . CDS 806056 806095 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=8 chr14 . exon 806056 806095 . + . ID=Thaps264222.8;Parent=Thaps264222;constitutive=1;ensembl_end_phase=1;rank=8 chr14 . CDS 806120 806494 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=9 chr14 . exon 806120 806494 . + . ID=Thaps264222.9;Parent=Thaps264222;constitutive=1;rank=9 chr14 . CDS 806594 806643 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=10 chr14 . exon 806594 806643 . + . ID=Thaps264222.10;Parent=Thaps264222;constitutive=1;ensembl_end_phase=2;rank=10 chr14 . CDS 806731 806843 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=11 chr14 . exon 806731 806843 . + . ID=Thaps264222.11;Parent=Thaps264222;constitutive=1;ensembl_end_phase=2;rank=11 chr14 . CDS 806930 807007 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=12 chr14 . exon 806930 807007 . + . ID=Thaps264222.12;Parent=Thaps264222;constitutive=1;rank=12 chr14 . CDS 807085 807809 . + 0 ID=Thaps264222;Parent=Thaps264222;rank=13 chr14 . exon 807085 807809 . + . ID=Thaps264222.13;Parent=Thaps264222;constitutive=1;ensembl_end_phase=2;rank=13 chr14 ensembl protein_coding_gene 808094 809859 . - . ID=Thaps9947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR0];external_name=Thaps9947;logic_name=jgi_thaps3 chr14 ensembl transcript 808094 809859 . - . ID=Thaps9947;Parent=Thaps9947;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 808094 808192 . - 0 ID=Thaps9947;Parent=Thaps9947;rank=3 chr14 . exon 808094 808192 . - . ID=Thaps9947.3;Parent=Thaps9947;constitutive=1;rank=3 chr14 . CDS 808275 808396 . - 0 ID=Thaps9947;Parent=Thaps9947;rank=2 chr14 . exon 808275 808396 . - . ID=Thaps9947.2;Parent=Thaps9947;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 808602 809859 . - 0 ID=Thaps9947;Parent=Thaps9947;rank=1 chr14 . exon 808602 809859 . - . ID=Thaps9947.1;Parent=Thaps9947;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . repeat_region 817637 817644 . ? . description=dust chr14 . repeat_region 818542 818549 . ? . description=dust chr14 ensembl protein_coding_gene 815247 816195 . - . ID=Thaps16777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR3];external_name=Thaps16777;logic_name=jgi_thaps3 chr14 ensembl transcript 815247 816195 . - . ID=Thaps16777;Parent=Thaps16777;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 815247 815843 . - 0 ID=Thaps16777;Parent=Thaps16777;rank=2 chr14 . exon 815247 815843 . - . ID=Thaps16777.2;Parent=Thaps16777;constitutive=1;rank=2 chr14 . CDS 815917 816195 . - 0 ID=Thaps16777;Parent=Thaps16777;rank=1 chr14 . exon 815917 816195 . - . ID=Thaps16777.1;Parent=Thaps16777;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 810602 812695 . + . ID=Thaps269798;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR1];external_name=Thaps269798;logic_name=jgi_thaps3 chr14 ensembl transcript 810602 812695 . + . ID=Thaps269798;Parent=Thaps269798;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 810602 812695 . + 0 ID=Thaps269798;Parent=Thaps269798;rank=1 chr14 . exon 810602 812695 . + . ID=Thaps269798.1;Parent=Thaps269798;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 813417 814052 . + . ID=Thaps37302;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR2];external_name=Thaps37302;logic_name=jgi_thaps3 chr14 ensembl transcript 813417 814052 . + . ID=Thaps37302;Parent=Thaps37302;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 813417 813589 . + 0 ID=Thaps37302;Parent=Thaps37302;rank=1 chr14 . exon 813417 813589 . + . ID=Thaps37302.1;Parent=Thaps37302;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 813626 814052 . + 0 ID=Thaps37302;Parent=Thaps37302;rank=2 chr14 . exon 813626 814052 . + . ID=Thaps37302.2;Parent=Thaps37302;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 817922 819385 . - . ID=Thaps9950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR4];external_name=Thaps9950;logic_name=jgi_thaps3 chr14 ensembl transcript 817922 819385 . - . ID=Thaps9950;Parent=Thaps9950;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 817922 819385 . - 0 ID=Thaps9950;Parent=Thaps9950;rank=1 chr14 . exon 817922 819385 . - . ID=Thaps9950.1;Parent=Thaps9950;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 820268 822431 . + . ID=Thaps24918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR5];external_name=Thaps24918;logic_name=jgi_thaps3 chr14 ensembl transcript 820268 822431 . + . ID=Thaps24918;Parent=Thaps24918;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 820268 820286 . + 0 ID=Thaps24918;Parent=Thaps24918;rank=1 chr14 . exon 820268 820286 . + . ID=Thaps24918.1;Parent=Thaps24918;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 820422 820525 . + 0 ID=Thaps24918;Parent=Thaps24918;rank=2 chr14 . exon 820422 820525 . + . ID=Thaps24918.2;Parent=Thaps24918;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 820607 821838 . + 0 ID=Thaps24918;Parent=Thaps24918;rank=3 chr14 . exon 820607 821838 . + . ID=Thaps24918.3;Parent=Thaps24918;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 821932 822308 . + 0 ID=Thaps24918;Parent=Thaps24918;rank=4 chr14 . exon 821932 822308 . + . ID=Thaps24918.4;Parent=Thaps24918;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 822400 822431 . + 0 ID=Thaps24918;Parent=Thaps24918;rank=5 chr14 . exon 822400 822431 . + . ID=Thaps24918.5;Parent=Thaps24918;constitutive=1;ensembl_end_phase=2;rank=5 chr14 ensembl protein_coding_gene 824032 826158 . + . ID=Thaps24919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR6];external_name=Thaps24919;logic_name=jgi_thaps3 chr14 ensembl transcript 824032 826158 . + . ID=Thaps24919;Parent=Thaps24919;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 824032 824328 . + 0 ID=Thaps24919;Parent=Thaps24919;rank=1 chr14 . exon 824032 824328 . + . ID=Thaps24919.1;Parent=Thaps24919;constitutive=1;rank=1 chr14 . CDS 824430 825452 . + 0 ID=Thaps24919;Parent=Thaps24919;rank=2 chr14 . exon 824430 825452 . + . ID=Thaps24919.2;Parent=Thaps24919;constitutive=1;rank=2 chr14 . CDS 825556 826158 . + 0 ID=Thaps24919;Parent=Thaps24919;rank=3 chr14 . exon 825556 826158 . + . ID=Thaps24919.3;Parent=Thaps24919;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 828322 831051 . - . ID=Thaps24920;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR8];external_name=Thaps24920;logic_name=jgi_thaps3 chr14 ensembl transcript 828322 831051 . - . ID=Thaps24920;Parent=Thaps24920;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 828322 828624 . - 0 ID=Thaps24920;Parent=Thaps24920;rank=3 chr14 . exon 828322 828624 . - . ID=Thaps24920.3;Parent=Thaps24920;constitutive=1;rank=3 chr14 . CDS 828714 829018 . - 0 ID=Thaps24920;Parent=Thaps24920;rank=2 chr14 . exon 828714 829018 . - . ID=Thaps24920.2;Parent=Thaps24920;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 829185 831051 . - 0 ID=Thaps24920;Parent=Thaps24920;rank=1 chr14 ensembl protein_coding_gene 826549 828024 . - . ID=Thaps9953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR7];external_name=Thaps9953;logic_name=jgi_thaps3 chr14 ensembl transcript 826549 828024 . - . ID=Thaps9953;Parent=Thaps9953;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 826549 828024 . - 0 ID=Thaps9953;Parent=Thaps9953;rank=1 chr14 . exon 826549 828024 . - . ID=Thaps9953.1;Parent=Thaps9953;constitutive=1;rank=1 chr14 . repeat_region 833018 833058 . ? . description=trf chr14 . repeat_region 833692 833724 . ? . description=trf chr14 . repeat_region 833692 833724 . ? . description=dust chr14 . repeat_region 834165 834185 . ? . description=trf chr14 . repeat_region 834165 834185 . ? . description=dust chr14 . repeat_region 834307 834366 . ? . description=dust chr14 . repeat_region 834314 834355 . ? . description=trf chr14 . repeat_region 837134 837315 . ? . description=trf chr14 . exon 829185 831051 . - . ID=Thaps24920.1;Parent=Thaps24920;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 831802 833106 . - . ID=Thaps24921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCR9];external_name=Thaps24921;logic_name=jgi_thaps3 chr14 ensembl transcript 831802 833106 . - . ID=Thaps24921;Parent=Thaps24921;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 831802 831896 . - 0 ID=Thaps24921;Parent=Thaps24921;rank=2 chr14 . exon 831802 831896 . - . ID=Thaps24921.2;Parent=Thaps24921;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 831990 833106 . - 0 ID=Thaps24921;Parent=Thaps24921;rank=1 chr14 . exon 831990 833106 . - . ID=Thaps24921.1;Parent=Thaps24921;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 836729 837607 . - . ID=Thaps24923;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCS1];external_name=Thaps24923;logic_name=jgi_thaps3 chr14 ensembl transcript 836729 837607 . - . ID=Thaps24923;Parent=Thaps24923;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 836729 836780 . - 0 ID=Thaps24923;Parent=Thaps24923;rank=3 chr14 . exon 836729 836780 . - . ID=Thaps24923.3;Parent=Thaps24923;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 836822 837445 . - 0 ID=Thaps24923;Parent=Thaps24923;rank=2 chr14 . exon 836822 837445 . - . ID=Thaps24923.2;Parent=Thaps24923;constitutive=1;rank=2 chr14 . CDS 837537 837607 . - 0 ID=Thaps24923;Parent=Thaps24923;rank=1 chr14 . exon 837537 837607 . - . ID=Thaps24923.1;Parent=Thaps24923;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 835697 836377 . + . ID=Thaps269802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCS0];external_name=Thaps269802;logic_name=jgi_thaps3 chr14 ensembl transcript 835697 836377 . + . ID=Thaps269802;Parent=Thaps269802;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 835697 835825 . + 0 ID=Thaps269802;Parent=Thaps269802;rank=1 chr14 . exon 835697 835825 . + . ID=Thaps269802.1;Parent=Thaps269802;constitutive=1;rank=1 chr14 . CDS 836018 836377 . + 0 ID=Thaps269802;Parent=Thaps269802;rank=2 chr14 . exon 836018 836377 . + . ID=Thaps269802.2;Parent=Thaps269802;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 838001 838904 . - . ID=Thaps9958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCS2];external_name=Thaps9958;logic_name=jgi_thaps3 chr14 ensembl transcript 838001 838904 . - . ID=Thaps9958;Parent=Thaps9958;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 838001 838745 . - 0 ID=Thaps9958;Parent=Thaps9958;rank=2 chr14 . exon 838001 838745 . - . ID=Thaps9958.2;Parent=Thaps9958;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 838825 838904 . - 0 ID=Thaps9958;Parent=Thaps9958;rank=1 chr14 . exon 838825 838904 . - . ID=Thaps9958.1;Parent=Thaps9958;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 846806 848543 . - . ID=Thaps26031;biotype=protein_coding;description=Serine hydroxymethyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CCS6];external_name=Thaps26031;logic_name=jgi_thaps3 chr14 ensembl transcript 846806 848543 . - . ID=Thaps26031;Parent=Thaps26031;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 846806 848188 . - 0 ID=Thaps26031;Parent=Thaps26031;rank=2 chr14 . exon 846806 848188 . - . ID=Thaps26031.2;Parent=Thaps26031;constitutive=1;rank=2 chr14 . CDS 848496 848543 . - 0 ID=Thaps26031;Parent=Thaps26031;rank=1 chr14 . exon 848496 848543 . - . ID=Thaps26031.1;Parent=Thaps26031;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 844362 845413 . - . ID=Thaps37338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCS4];external_name=Thaps37338;logic_name=jgi_thaps3 chr14 ensembl transcript 844362 845413 . - . ID=Thaps37338;Parent=Thaps37338;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 844362 844711 . - 0 ID=Thaps37338;Parent=Thaps37338;rank=3 chr14 . exon 844362 844711 . - . ID=Thaps37338.3;Parent=Thaps37338;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 844832 845013 . - 0 ID=Thaps37338;Parent=Thaps37338;rank=2 chr14 . exon 844832 845013 . - . ID=Thaps37338.2;Parent=Thaps37338;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 845292 845413 . - 0 ID=Thaps37338;Parent=Thaps37338;rank=1 chr14 . exon 845292 845413 . - . ID=Thaps37338.1;Parent=Thaps37338;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 846064 846357 . + . ID=Thaps37367;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCS5];external_name=Thaps37367;logic_name=jgi_thaps3 chr14 ensembl transcript 846064 846357 . + . ID=Thaps37367;Parent=Thaps37367;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 846064 846357 . + 0 ID=Thaps37367;Parent=Thaps37367;rank=1 chr14 . exon 846064 846357 . + . ID=Thaps37367.1;Parent=Thaps37367;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 839219 842663 . - . ID=Thaps9959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCS3];external_name=Thaps9959;logic_name=jgi_thaps3 chr14 ensembl transcript 839219 842663 . - . ID=Thaps9959;Parent=Thaps9959;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 839219 840695 . - 0 ID=Thaps9959;Parent=Thaps9959;rank=5 chr14 . exon 839219 840695 . - . ID=Thaps9959.5;Parent=Thaps9959;constitutive=1;ensembl_end_phase=1;rank=5 chr14 . CDS 840811 841321 . - 0 ID=Thaps9959;Parent=Thaps9959;rank=4 chr14 . exon 840811 841321 . - . ID=Thaps9959.4;Parent=Thaps9959;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . CDS 841404 842021 . - 0 ID=Thaps9959;Parent=Thaps9959;rank=3 chr14 . exon 841404 842021 . - . ID=Thaps9959.3;Parent=Thaps9959;constitutive=1;rank=3 chr14 . CDS 842133 842507 . - 0 ID=Thaps9959;Parent=Thaps9959;rank=2 chr14 . exon 842133 842507 . - . ID=Thaps9959.2;Parent=Thaps9959;constitutive=1;rank=2 chr14 . CDS 842600 842663 . - 0 ID=Thaps9959;Parent=Thaps9959;rank=1 chr14 . exon 842600 842663 . - . ID=Thaps9959.1;Parent=Thaps9959;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . repeat_region 849984 850016 . ? . description=trf chr14 . repeat_region 851227 851510 . ? . description=trf chr14 . repeat_region 853875 853938 . ? . description=trf chr14 . repeat_region 854184 854228 . ? . description=trf chr14 ensembl protein_coding_gene 857728 860325 . + . ID=Thaps24925;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCS9];external_name=Thaps24925;logic_name=jgi_thaps3 chr14 ensembl transcript 857728 860325 . + . ID=Thaps24925;Parent=Thaps24925;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 857728 858229 . + 0 ID=Thaps24925;Parent=Thaps24925;rank=1 chr14 . exon 857728 858229 . + . ID=Thaps24925.1;Parent=Thaps24925;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 858399 858772 . + 0 ID=Thaps24925;Parent=Thaps24925;rank=2 chr14 . exon 858399 858772 . + . ID=Thaps24925.2;Parent=Thaps24925;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 858857 859858 . + 0 ID=Thaps24925;Parent=Thaps24925;rank=3 chr14 . exon 858857 859858 . + . ID=Thaps24925.3;Parent=Thaps24925;constitutive=1;rank=3 chr14 . CDS 859932 860156 . + 0 ID=Thaps24925;Parent=Thaps24925;rank=4 chr14 . CDS 860248 860325 . + 0 ID=Thaps24925;Parent=Thaps24925;rank=5 chr14 ensembl protein_coding_gene 849203 855902 . + . ID=Thaps9963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCS7];external_name=Thaps9963;logic_name=jgi_thaps3 chr14 ensembl transcript 849203 855902 . + . ID=Thaps9963;Parent=Thaps9963;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 849203 849260 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=1 chr14 . exon 849203 849260 . + . ID=Thaps9963.1;Parent=Thaps9963;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 849573 849815 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=2 chr14 . exon 849573 849815 . + . ID=Thaps9963.2;Parent=Thaps9963;constitutive=1;rank=2 chr14 . CDS 849890 850623 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=3 chr14 . exon 849890 850623 . + . ID=Thaps9963.3;Parent=Thaps9963;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 850713 851546 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=4 chr14 . exon 850713 851546 . + . ID=Thaps9963.4;Parent=Thaps9963;constitutive=1;rank=4 chr14 . CDS 851719 851754 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=5 chr14 . exon 851719 851754 . + . ID=Thaps9963.5;Parent=Thaps9963;constitutive=1;rank=5 chr14 . CDS 851952 851981 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=6 chr14 . exon 851952 851981 . + . ID=Thaps9963.6;Parent=Thaps9963;constitutive=1;rank=6 chr14 . CDS 852198 852227 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=7 chr14 . exon 852198 852227 . + . ID=Thaps9963.7;Parent=Thaps9963;constitutive=1;rank=7 chr14 . CDS 852313 852405 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=8 chr14 . exon 852313 852405 . + . ID=Thaps9963.8;Parent=Thaps9963;constitutive=1;rank=8 chr14 . CDS 852483 852573 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=9 chr14 . exon 852483 852573 . + . ID=Thaps9963.9;Parent=Thaps9963;constitutive=1;ensembl_end_phase=1;rank=9 chr14 . CDS 852778 853318 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=10 chr14 . exon 852778 853318 . + . ID=Thaps9963.10;Parent=Thaps9963;constitutive=1;ensembl_end_phase=1;rank=10 chr14 . CDS 853686 853698 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=11 chr14 . exon 853686 853698 . + . ID=Thaps9963.11;Parent=Thaps9963;constitutive=1;ensembl_end_phase=1;rank=11 chr14 . CDS 853951 854018 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=12 chr14 . exon 853951 854018 . + . ID=Thaps9963.12;Parent=Thaps9963;constitutive=1;ensembl_end_phase=2;rank=12 chr14 . CDS 854102 854242 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=13 chr14 . exon 854102 854242 . + . ID=Thaps9963.13;Parent=Thaps9963;constitutive=1;rank=13 chr14 . CDS 854534 855308 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=14 chr14 . exon 854534 855308 . + . ID=Thaps9963.14;Parent=Thaps9963;constitutive=1;ensembl_end_phase=1;rank=14 chr14 . CDS 855388 855493 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=15 chr14 . exon 855388 855493 . + . ID=Thaps9963.15;Parent=Thaps9963;constitutive=1;ensembl_end_phase=1;rank=15 chr14 . CDS 855583 855902 . + 0 ID=Thaps9963;Parent=Thaps9963;rank=16 chr14 . exon 855583 855902 . + . ID=Thaps9963.16;Parent=Thaps9963;constitutive=1;ensembl_end_phase=2;rank=16 chr14 ensembl protein_coding_gene 856497 857396 . - . ID=Thaps9964;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCS8];external_name=Thaps9964;logic_name=jgi_thaps3 chr14 ensembl transcript 856497 857396 . - . ID=Thaps9964;Parent=Thaps9964;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 856497 857396 . - 0 ID=Thaps9964;Parent=Thaps9964;rank=1 chr14 . exon 856497 857396 . - . ID=Thaps9964.1;Parent=Thaps9964;constitutive=1;rank=1 chr14 . repeat_region 861855 861862 . ? . description=dust chr14 . repeat_region 865510 865791 . ? . description=dust chr14 . exon 859932 860156 . + . ID=Thaps24925.4;Parent=Thaps24925;constitutive=1;rank=4 chr14 . exon 860248 860325 . + . ID=Thaps24925.5;Parent=Thaps24925;constitutive=1;rank=5 chr14 ensembl protein_coding_gene 868825 869469 . + . ID=Thaps24926;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCT3];external_name=Thaps24926;logic_name=jgi_thaps3 chr14 ensembl transcript 868825 869469 . + . ID=Thaps24926;Parent=Thaps24926;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 868825 869469 . + 0 ID=Thaps24926;Parent=Thaps24926;rank=1 chr14 . exon 868825 869469 . + . ID=Thaps24926.1;Parent=Thaps24926;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 860591 861583 . + . ID=Thaps9966;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCT0];external_name=Thaps9966;logic_name=jgi_thaps3 chr14 ensembl transcript 860591 861583 . + . ID=Thaps9966;Parent=Thaps9966;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 860591 861583 . + 0 ID=Thaps9966;Parent=Thaps9966;rank=1 chr14 . exon 860591 861583 . + . ID=Thaps9966.1;Parent=Thaps9966;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 861883 863261 . - . ID=Thaps9967;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCT1];external_name=Thaps9967;logic_name=jgi_thaps3 chr14 ensembl transcript 861883 863261 . - . ID=Thaps9967;Parent=Thaps9967;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 861883 862038 . - 0 ID=Thaps9967;Parent=Thaps9967;rank=4 chr14 . exon 861883 862038 . - . ID=Thaps9967.4;Parent=Thaps9967;constitutive=1;rank=4 chr14 . CDS 862136 862192 . - 0 ID=Thaps9967;Parent=Thaps9967;rank=3 chr14 . exon 862136 862192 . - . ID=Thaps9967.3;Parent=Thaps9967;constitutive=1;rank=3 chr14 . CDS 862278 862325 . - 0 ID=Thaps9967;Parent=Thaps9967;rank=2 chr14 . exon 862278 862325 . - . ID=Thaps9967.2;Parent=Thaps9967;constitutive=1;rank=2 chr14 . CDS 862395 863261 . - 0 ID=Thaps9967;Parent=Thaps9967;rank=1 chr14 . exon 862395 863261 . - . ID=Thaps9967.1;Parent=Thaps9967;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 863738 866551 . + . ID=Thaps9968;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCT2];external_name=Thaps9968;logic_name=jgi_thaps3 chr14 ensembl transcript 863738 866551 . + . ID=Thaps9968;Parent=Thaps9968;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 863738 866551 . + 0 ID=Thaps9968;Parent=Thaps9968;rank=1 chr14 . exon 863738 866551 . + . ID=Thaps9968.1;Parent=Thaps9968;constitutive=1;rank=1 chr14 . repeat_region 868972 868996 . ? . description=trf chr14 . repeat_region 875974 875994 . ? . description=trf chr14 ensembl protein_coding_gene 873788 875044 . + . ID=Thaps24928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCT5];external_name=Thaps24928;logic_name=jgi_thaps3 chr14 ensembl transcript 873788 875044 . + . ID=Thaps24928;Parent=Thaps24928;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 873788 875044 . + 0 ID=Thaps24928;Parent=Thaps24928;rank=1 chr14 . exon 873788 875044 . + . ID=Thaps24928.1;Parent=Thaps24928;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 871145 872707 . + . ID=Thaps37486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCT4];external_name=Thaps37486;logic_name=jgi_thaps3 chr14 ensembl transcript 871145 872707 . + . ID=Thaps37486;Parent=Thaps37486;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 871145 871254 . + 0 ID=Thaps37486;Parent=Thaps37486;rank=1 chr14 . exon 871145 871254 . + . ID=Thaps37486.1;Parent=Thaps37486;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 871357 872707 . + 0 ID=Thaps37486;Parent=Thaps37486;rank=2 chr14 . exon 871357 872707 . + . ID=Thaps37486.2;Parent=Thaps37486;constitutive=1;ensembl_end_phase=1;rank=2 chr14 ensembl protein_coding_gene 877810 880209 . - . ID=Thaps42475;biotype=protein_coding;description=Succinate dehydrogenase flavoprotein subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CCT7];external_name=Thaps42475;logic_name=jgi_thaps3 chr14 ensembl transcript 877810 880209 . - . ID=Thaps42475;Parent=Thaps42475;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 877810 878537 . - 0 ID=Thaps42475;Parent=Thaps42475;rank=3 chr14 . exon 877810 878537 . - . ID=Thaps42475.3;Parent=Thaps42475;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 878636 879513 . - 0 ID=Thaps42475;Parent=Thaps42475;rank=2 chr14 . exon 878636 879513 . - . ID=Thaps42475.2;Parent=Thaps42475;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 879902 880209 . - 0 ID=Thaps42475;Parent=Thaps42475;rank=1 chr14 ensembl protein_coding_gene 876250 876873 . - . ID=Thaps9972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCT6];external_name=Thaps9972;logic_name=jgi_thaps3 chr14 ensembl transcript 876250 876873 . - . ID=Thaps9972;Parent=Thaps9972;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 876250 876873 . - 0 ID=Thaps9972;Parent=Thaps9972;rank=1 chr14 . exon 876250 876873 . - . ID=Thaps9972.1;Parent=Thaps9972;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 883583 884233 . + . ID=Thaps24931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCU0];external_name=Thaps24931;logic_name=jgi_thaps3 chr14 ensembl transcript 883583 884233 . + . ID=Thaps24931;Parent=Thaps24931;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 883583 884233 . + 0 ID=Thaps24931;Parent=Thaps24931;rank=1 chr14 . exon 883583 884233 . + . ID=Thaps24931.1;Parent=Thaps24931;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 884429 885646 . - . ID=Thaps24932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCU1];external_name=Thaps24932;logic_name=jgi_thaps3 chr14 ensembl transcript 884429 885646 . - . ID=Thaps24932;Parent=Thaps24932;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 884429 884656 . - 0 ID=Thaps24932;Parent=Thaps24932;rank=5 chr14 . exon 884429 884656 . - . ID=Thaps24932.5;Parent=Thaps24932;constitutive=1;rank=5 chr14 . CDS 884764 884879 . - 0 ID=Thaps24932;Parent=Thaps24932;rank=4 chr14 . exon 884764 884879 . - . ID=Thaps24932.4;Parent=Thaps24932;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 884978 885159 . - 0 ID=Thaps24932;Parent=Thaps24932;rank=3 chr14 . exon 884978 885159 . - . ID=Thaps24932.3;Parent=Thaps24932;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 885381 885397 . - 0 ID=Thaps24932;Parent=Thaps24932;rank=2 chr14 . exon 885381 885397 . - . ID=Thaps24932.2;Parent=Thaps24932;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 885539 885646 . - 0 ID=Thaps24932;Parent=Thaps24932;rank=1 chr14 . exon 885539 885646 . - . ID=Thaps24932.1;Parent=Thaps24932;constitutive=1;rank=1 chr14 . exon 879902 880209 . - . ID=Thaps42475.1;Parent=Thaps42475;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 880856 881677 . - . ID=Thaps9975;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCT8];external_name=Thaps9975;logic_name=jgi_thaps3 chr14 ensembl transcript 880856 881677 . - . ID=Thaps9975;Parent=Thaps9975;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 880856 881677 . - 0 ID=Thaps9975;Parent=Thaps9975;rank=1 chr14 . exon 880856 881677 . - . ID=Thaps9975.1;Parent=Thaps9975;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 882259 883128 . + . ID=Thaps9976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCT9];external_name=Thaps9976;logic_name=jgi_thaps3 chr14 ensembl transcript 882259 883128 . + . ID=Thaps9976;Parent=Thaps9976;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 882259 883128 . + 0 ID=Thaps9976;Parent=Thaps9976;rank=1 chr14 . exon 882259 883128 . + . ID=Thaps9976.1;Parent=Thaps9976;constitutive=1;rank=1 chr14 . repeat_region 891058 891065 . ? . description=dust chr14 ensembl protein_coding_gene 898125 899233 . + . ID=Thaps264237;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCU2];external_name=Thaps264237;logic_name=jgi_thaps3 chr14 ensembl transcript 898125 899233 . + . ID=Thaps264237;Parent=Thaps264237;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 898125 898231 . + 0 ID=Thaps264237;Parent=Thaps264237;rank=1 chr14 . exon 898125 898231 . + . ID=Thaps264237.1;Parent=Thaps264237;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 898382 898657 . + 0 ID=Thaps264237;Parent=Thaps264237;rank=2 chr14 . exon 898382 898657 . + . ID=Thaps264237.2;Parent=Thaps264237;constitutive=1;rank=2 chr14 . CDS 898892 899233 . + 0 ID=Thaps264237;Parent=Thaps264237;rank=3 chr14 . repeat_region 903687 903711 . ? . description=trf chr14 . repeat_region 905656 906312 . ? . description=trf chr14 . repeat_region 905710 905943 . ? . description=trf chr14 . repeat_region 905955 906186 . ? . description=trf chr14 . repeat_region 906070 906345 . ? . description=trf chr14 ensembl protein_coding_gene 904311 907385 . - . ID=Thaps24935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCU4];external_name=Thaps24935;logic_name=jgi_thaps3 chr14 ensembl transcript 904311 907385 . - . ID=Thaps24935;Parent=Thaps24935;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 904311 907385 . - 0 ID=Thaps24935;Parent=Thaps24935;rank=1 chr14 . exon 904311 907385 . - . ID=Thaps24935.1;Parent=Thaps24935;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 908346 912366 . + . ID=Thaps24936;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCU5];external_name=Thaps24936;logic_name=jgi_thaps3 chr14 ensembl transcript 908346 912366 . + . ID=Thaps24936;Parent=Thaps24936;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 908346 908953 . + 0 ID=Thaps24936;Parent=Thaps24936;rank=1 chr14 . exon 908346 908953 . + . ID=Thaps24936.1;Parent=Thaps24936;constitutive=1;ensembl_end_phase=2;rank=1 chr14 . CDS 909036 909664 . + 0 ID=Thaps24936;Parent=Thaps24936;rank=2 chr14 . CDS 910211 910280 . + 0 ID=Thaps24936;Parent=Thaps24936;rank=3 chr14 . CDS 910361 911489 . + 0 ID=Thaps24936;Parent=Thaps24936;rank=4 chr14 . CDS 911584 912366 . + 0 ID=Thaps24936;Parent=Thaps24936;rank=5 chr14 . exon 898892 899233 . + . ID=Thaps264237.3;Parent=Thaps264237;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 900913 902623 . - . ID=Thaps37374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCU3];external_name=Thaps37374;logic_name=jgi_thaps3 chr14 ensembl transcript 900913 902623 . - . ID=Thaps37374;Parent=Thaps37374;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 900913 901049 . - 0 ID=Thaps37374;Parent=Thaps37374;rank=2 chr14 . exon 900913 901049 . - . ID=Thaps37374.2;Parent=Thaps37374;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 902203 902623 . - 0 ID=Thaps37374;Parent=Thaps37374;rank=1 chr14 . exon 902203 902623 . - . ID=Thaps37374.1;Parent=Thaps37374;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . repeat_region 917841 921143 . + . description=Harbinger2_TP chr14 . exon 909036 909664 . + . ID=Thaps24936.2;Parent=Thaps24936;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . exon 910211 910280 . + . ID=Thaps24936.3;Parent=Thaps24936;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . exon 910361 911489 . + . ID=Thaps24936.4;Parent=Thaps24936;constitutive=1;ensembl_end_phase=1;rank=4 chr14 . exon 911584 912366 . + . ID=Thaps24936.5;Parent=Thaps24936;constitutive=1;rank=5 chr14 ensembl protein_coding_gene 912407 917756 . - . ID=Thaps24937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCU6];external_name=Thaps24937;logic_name=jgi_thaps3 chr14 ensembl transcript 912407 917756 . - . ID=Thaps24937;Parent=Thaps24937;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 912407 914310 . - 0 ID=Thaps24937;Parent=Thaps24937;rank=2 chr14 . exon 912407 914310 . - . ID=Thaps24937.2;Parent=Thaps24937;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 914393 917756 . - 0 ID=Thaps24937;Parent=Thaps24937;rank=1 chr14 . exon 914393 917756 . - . ID=Thaps24937.1;Parent=Thaps24937;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . repeat_region 920835 920924 . ? . description=trf chr14 . repeat_region 921072 921089 . ? . description=dust chr14 . repeat_region 924144 924167 . ? . description=trf chr14 . repeat_region 924144 924167 . ? . description=dust chr14 ensembl protein_coding_gene 925288 930100 . + . ID=Thaps24939;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCU8];external_name=Thaps24939;logic_name=jgi_thaps3 chr14 ensembl transcript 925288 930100 . + . ID=Thaps24939;Parent=Thaps24939;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 925288 925527 . + 0 ID=Thaps24939;Parent=Thaps24939;rank=1 chr14 . exon 925288 925527 . + . ID=Thaps24939.1;Parent=Thaps24939;constitutive=1;rank=1 chr14 . CDS 925843 926132 . + 0 ID=Thaps24939;Parent=Thaps24939;rank=2 chr14 . exon 925843 926132 . + . ID=Thaps24939.2;Parent=Thaps24939;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 926511 927599 . + 0 ID=Thaps24939;Parent=Thaps24939;rank=3 chr14 . exon 926511 927599 . + . ID=Thaps24939.3;Parent=Thaps24939;constitutive=1;rank=3 chr14 . CDS 927684 928156 . + 0 ID=Thaps24939;Parent=Thaps24939;rank=4 chr14 . exon 927684 928156 . + . ID=Thaps24939.4;Parent=Thaps24939;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . CDS 928230 928316 . + 0 ID=Thaps24939;Parent=Thaps24939;rank=5 chr14 . exon 928230 928316 . + . ID=Thaps24939.5;Parent=Thaps24939;constitutive=1;rank=5 chr14 . CDS 928439 929128 . + 0 ID=Thaps24939;Parent=Thaps24939;rank=6 chr14 . exon 928439 929128 . + . ID=Thaps24939.6;Parent=Thaps24939;constitutive=1;rank=6 chr14 . CDS 929208 930100 . + 0 ID=Thaps24939;Parent=Thaps24939;rank=7 chr14 ensembl protein_coding_gene 922186 923495 . - . ID=Thaps264240;biotype=protein_coding;description=UDP-N-acetylglucosamine: polypeptide-n-acetylglucosaminyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8CCU7];external_name=Thaps264240;logic_name=jgi_thaps3 chr14 ensembl transcript 922186 923495 . - . ID=Thaps264240;Parent=Thaps264240;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 922186 922601 . - 0 ID=Thaps264240;Parent=Thaps264240;rank=2 chr14 . exon 922186 922601 . - . ID=Thaps264240.2;Parent=Thaps264240;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 922650 923495 . - 0 ID=Thaps264240;Parent=Thaps264240;rank=1 chr14 . exon 922650 923495 . - . ID=Thaps264240.1;Parent=Thaps264240;constitutive=1;rank=1 chr14 . exon 929208 930100 . + . ID=Thaps24939.7;Parent=Thaps24939;constitutive=1;ensembl_end_phase=2;rank=7 chr14 ensembl protein_coding_gene 931887 934007 . - . ID=Thaps24940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCV0];external_name=Thaps24940;logic_name=jgi_thaps3 chr14 ensembl transcript 931887 934007 . - . ID=Thaps24940;Parent=Thaps24940;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 931887 932319 . - 0 ID=Thaps24940;Parent=Thaps24940;rank=3 chr14 . exon 931887 932319 . - . ID=Thaps24940.3;Parent=Thaps24940;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . CDS 932421 932873 . - 0 ID=Thaps24940;Parent=Thaps24940;rank=2 chr14 . exon 932421 932873 . - . ID=Thaps24940.2;Parent=Thaps24940;constitutive=1;rank=2 chr14 . CDS 933004 934007 . - 0 ID=Thaps24940;Parent=Thaps24940;rank=1 chr14 . exon 933004 934007 . - . ID=Thaps24940.1;Parent=Thaps24940;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 935512 935826 . - . ID=Thaps37322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCV1];external_name=Thaps37322;logic_name=jgi_thaps3 chr14 ensembl transcript 935512 935826 . - . ID=Thaps37322;Parent=Thaps37322;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 935512 935826 . - 0 ID=Thaps37322;Parent=Thaps37322;rank=1 chr14 . exon 935512 935826 . - . ID=Thaps37322.1;Parent=Thaps37322;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 930494 931787 . + . ID=Thaps9987;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCU9];external_name=Thaps9987;logic_name=jgi_thaps3 chr14 ensembl transcript 930494 931787 . + . ID=Thaps9987;Parent=Thaps9987;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 930494 930590 . + 0 ID=Thaps9987;Parent=Thaps9987;rank=1 chr14 . exon 930494 930590 . + . ID=Thaps9987.1;Parent=Thaps9987;constitutive=1;ensembl_end_phase=1;rank=1 chr14 . CDS 930699 931032 . + 0 ID=Thaps9987;Parent=Thaps9987;rank=2 chr14 . exon 930699 931032 . + . ID=Thaps9987.2;Parent=Thaps9987;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 931142 931787 . + 0 ID=Thaps9987;Parent=Thaps9987;rank=3 chr14 . exon 931142 931787 . + . ID=Thaps9987.3;Parent=Thaps9987;constitutive=1;ensembl_end_phase=1;rank=3 chr14 ensembl protein_coding_gene 937104 938450 . + . ID=Thaps9990;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCV2];external_name=Thaps9990;logic_name=jgi_thaps3 chr14 ensembl transcript 937104 938450 . + . ID=Thaps9990;Parent=Thaps9990;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 937104 938450 . + 0 ID=Thaps9990;Parent=Thaps9990;rank=1 chr14 . exon 937104 938450 . + . ID=Thaps9990.1;Parent=Thaps9990;constitutive=1;rank=1 chr14 . repeat_region 939001 939044 . ? . description=trf chr14 . repeat_region 939057 939166 . ? . description=trf chr14 . repeat_region 939306 939379 . ? . description=trf chr14 . repeat_region 940724 940892 . ? . description=trf chr14 . repeat_region 940752 940879 . ? . description=trf chr14 . repeat_region 940771 940892 . ? . description=trf chr14 . repeat_region 940798 940879 . ? . description=trf chr14 . repeat_region 941019 941092 . ? . description=trf chr14 . repeat_region 942800 942855 . ? . description=trf chr14 . repeat_region 942994 943075 . ? . description=trf chr14 . biological_region 946986 946989 0.999 - . logic_name=eponine chr14 ensembl protein_coding_gene 948095 949214 . - . ID=Thaps264258;biotype=protein_coding;description=Peroxisomal biogenesis factor 6%2C peroxisomal assembly factor w%2C Paf2%2C pex6-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCW1];external_name=Thaps264258;logic_name=jgi_thaps3 chr14 ensembl transcript 948095 949214 . - . ID=Thaps264258;Parent=Thaps264258;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 948095 948595 . - 0 ID=Thaps264258;Parent=Thaps264258;rank=4 chr14 . exon 948095 948595 . - . ID=Thaps264258.4;Parent=Thaps264258;constitutive=1;rank=4 chr14 . CDS 948635 948762 . - 0 ID=Thaps264258;Parent=Thaps264258;rank=3 chr14 . exon 948635 948762 . - . ID=Thaps264258.3;Parent=Thaps264258;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 948841 948972 . - 0 ID=Thaps264258;Parent=Thaps264258;rank=2 chr14 . CDS 949067 949214 . - 0 ID=Thaps264258;Parent=Thaps264258;rank=1 chr14 ensembl protein_coding_gene 944557 944919 . + . ID=Thaps37309;biotype=protein_coding;description=Histone H2B [Source:UniProtKB/TrEMBL%3BAcc:B5YMW8];external_name=Thaps37309;logic_name=jgi_thaps3 chr14 ensembl transcript 944557 944919 . + . ID=Thaps37309;Parent=Thaps37309;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 944557 944919 . + 0 ID=Thaps37309;Parent=Thaps37309;rank=1 chr14 . exon 944557 944919 . + . ID=Thaps37309.1;Parent=Thaps37309;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 946619 946930 . + . ID=Thaps37357;biotype=protein_coding;description=Histone H4 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD7];external_name=H4_2;logic_name=jgi_thaps3 chr14 ensembl transcript 946619 946930 . + . ID=Thaps37357;Parent=Thaps37357;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 946619 946930 . + 0 ID=Thaps37357;Parent=Thaps37357;rank=1 chr14 . exon 946619 946930 . + . ID=Thaps37357.1;Parent=Thaps37357;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 943851 944225 . - . ID=Thaps37431;biotype=protein_coding;description=Histone H2A [Source:UniProtKB/TrEMBL%3BAcc:B8BX19];external_name=Thaps37431;logic_name=jgi_thaps3 chr14 ensembl transcript 943851 944225 . - . ID=Thaps37431;Parent=Thaps37431;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 943851 944225 . - 0 ID=Thaps37431;Parent=Thaps37431;rank=1 chr14 . exon 943851 944225 . - . ID=Thaps37431.1;Parent=Thaps37431;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 945718 946244 . - . ID=Thaps37432;biotype=protein_coding;description=Histone H3 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD6];external_name=H3-2;logic_name=jgi_thaps3 chr14 ensembl transcript 945718 946244 . - . ID=Thaps37432;Parent=Thaps37432;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 945718 946015 . - 0 ID=Thaps37432;Parent=Thaps37432;rank=2 chr14 . exon 945718 946015 . - . ID=Thaps37432.2;Parent=Thaps37432;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 946132 946244 . - 0 ID=Thaps37432;Parent=Thaps37432;rank=1 chr14 . exon 946132 946244 . - . ID=Thaps37432.1;Parent=Thaps37432;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 939024 939535 . - . ID=Thaps9991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCV3];external_name=Thaps9991;logic_name=jgi_thaps3 chr14 ensembl transcript 939024 939535 . - . ID=Thaps9991;Parent=Thaps9991;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 939024 939188 . - 0 ID=Thaps9991;Parent=Thaps9991;rank=2 chr14 . exon 939024 939188 . - . ID=Thaps9991.2;Parent=Thaps9991;constitutive=1;rank=2 chr14 . CDS 939305 939535 . - 0 ID=Thaps9991;Parent=Thaps9991;rank=1 chr14 . exon 939305 939535 . - . ID=Thaps9991.1;Parent=Thaps9991;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 940719 941830 . - . ID=Thaps9992;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCV4];external_name=Thaps9992;logic_name=jgi_thaps3 chr14 ensembl transcript 940719 941830 . - . ID=Thaps9992;Parent=Thaps9992;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 940719 940901 . - 0 ID=Thaps9992;Parent=Thaps9992;rank=3 chr14 . exon 940719 940901 . - . ID=Thaps9992.3;Parent=Thaps9992;constitutive=1;rank=3 chr14 . CDS 941018 941354 . - 0 ID=Thaps9992;Parent=Thaps9992;rank=2 chr14 . exon 941018 941354 . - . ID=Thaps9992.2;Parent=Thaps9992;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 941727 941830 . - 0 ID=Thaps9992;Parent=Thaps9992;rank=1 chr14 . exon 941727 941830 . - . ID=Thaps9992.1;Parent=Thaps9992;constitutive=1;ensembl_end_phase=2;rank=1 chr14 ensembl protein_coding_gene 942560 943083 . + . ID=Thaps9993;biotype=protein_coding;description=Histone H1 [Source:UniProtKB/TrEMBL%3BAcc:B8CCV5];external_name=Thaps9993;logic_name=jgi_thaps3 chr14 ensembl transcript 942560 943083 . + . ID=Thaps9993;Parent=Thaps9993;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 942560 942856 . + 0 ID=Thaps9993;Parent=Thaps9993;rank=1 chr14 . exon 942560 942856 . + . ID=Thaps9993.1;Parent=Thaps9993;constitutive=1;rank=1 chr14 . CDS 942973 943083 . + 0 ID=Thaps9993;Parent=Thaps9993;rank=2 chr14 . exon 942973 943083 . + . ID=Thaps9993.2;Parent=Thaps9993;constitutive=1;rank=2 chr14 ensembl protein_coding_gene 947389 947964 . + . ID=Thaps9998;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCW0];external_name=Thaps9998;logic_name=jgi_thaps3 chr14 ensembl transcript 947389 947964 . + . ID=Thaps9998;Parent=Thaps9998;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 947389 947964 . + 0 ID=Thaps9998;Parent=Thaps9998;rank=1 chr14 . exon 947389 947964 . + . ID=Thaps9998.1;Parent=Thaps9998;constitutive=1;rank=1 chr14 . repeat_region 952025 952040 . ? . description=dust chr14 . repeat_region 956150 956211 . ? . description=dust chr14 . repeat_region 956610 956630 . ? . description=dust chr14 ensembl protein_coding_gene 957716 961125 . + . ID=Thaps10002;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCW4];external_name=Thaps10002;logic_name=jgi_thaps3 chr14 ensembl transcript 957716 961125 . + . ID=Thaps10002;Parent=Thaps10002;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 957716 957895 . + 0 ID=Thaps10002;Parent=Thaps10002;rank=1 chr14 . exon 957716 957895 . + . ID=Thaps10002.1;Parent=Thaps10002;constitutive=1;rank=1 chr14 . CDS 958012 958058 . + 0 ID=Thaps10002;Parent=Thaps10002;rank=2 chr14 . exon 958012 958058 . + . ID=Thaps10002.2;Parent=Thaps10002;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 958538 959116 . + 0 ID=Thaps10002;Parent=Thaps10002;rank=3 chr14 . exon 958538 959116 . + . ID=Thaps10002.3;Parent=Thaps10002;constitutive=1;rank=3 chr14 . CDS 959194 960441 . + 0 ID=Thaps10002;Parent=Thaps10002;rank=4 chr14 . CDS 960528 961125 . + 0 ID=Thaps10002;Parent=Thaps10002;rank=5 chr14 . exon 948841 948972 . - . ID=Thaps264258.2;Parent=Thaps264258;constitutive=1;rank=2 chr14 . exon 949067 949214 . - . ID=Thaps264258.1;Parent=Thaps264258;constitutive=1;ensembl_end_phase=1;rank=1 chr14 ensembl protein_coding_gene 954519 955169 . - . ID=Thaps264260;biotype=protein_coding;description=Kinase like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCW3];external_name=Thaps264260;logic_name=jgi_thaps3 chr14 ensembl transcript 954519 955169 . - . ID=Thaps264260;Parent=Thaps264260;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 954519 954751 . - 0 ID=Thaps264260;Parent=Thaps264260;rank=2 chr14 . exon 954519 954751 . - . ID=Thaps264260.2;Parent=Thaps264260;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 954825 955169 . - 0 ID=Thaps264260;Parent=Thaps264260;rank=1 chr14 . exon 954825 955169 . - . ID=Thaps264260.1;Parent=Thaps264260;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 951840 953635 . + . ID=Thaps37264;biotype=protein_coding;description=Mu subunit of tetrameric clathrin adaptor complex AP1 [Source:UniProtKB/TrEMBL%3BAcc:B8CCW2];external_name=APM1;logic_name=jgi_thaps3 chr14 ensembl transcript 951840 953635 . + . ID=Thaps37264;Parent=Thaps37264;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 951840 951992 . + 0 ID=Thaps37264;Parent=Thaps37264;rank=1 chr14 . exon 951840 951992 . + . ID=Thaps37264.1;Parent=Thaps37264;constitutive=1;rank=1 chr14 . CDS 952035 952073 . + 0 ID=Thaps37264;Parent=Thaps37264;rank=2 chr14 . exon 952035 952073 . + . ID=Thaps37264.2;Parent=Thaps37264;constitutive=1;rank=2 chr14 . CDS 952499 953635 . + 0 ID=Thaps37264;Parent=Thaps37264;rank=3 chr14 . exon 952499 953635 . + . ID=Thaps37264.3;Parent=Thaps37264;constitutive=1;rank=3 chr14 . repeat_region 962069 962092 . ? . description=trf chr14 . exon 959194 960441 . + . ID=Thaps10002.4;Parent=Thaps10002;constitutive=1;rank=4 chr14 . exon 960528 961125 . + . ID=Thaps10002.5;Parent=Thaps10002;constitutive=1;ensembl_end_phase=1;rank=5 chr14 ensembl protein_coding_gene 963193 969156 . + . ID=Thaps24942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCW5];external_name=Thaps24942;logic_name=jgi_thaps3 chr14 ensembl transcript 963193 969156 . + . ID=Thaps24942;Parent=Thaps24942;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 963193 967767 . + 0 ID=Thaps24942;Parent=Thaps24942;rank=1 chr14 . exon 963193 967767 . + . ID=Thaps24942.1;Parent=Thaps24942;constitutive=1;rank=1 chr14 . CDS 967848 968092 . + 0 ID=Thaps24942;Parent=Thaps24942;rank=2 chr14 . exon 967848 968092 . + . ID=Thaps24942.2;Parent=Thaps24942;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 968178 969156 . + 0 ID=Thaps24942;Parent=Thaps24942;rank=3 chr14 . exon 968178 969156 . + . ID=Thaps24942.3;Parent=Thaps24942;constitutive=1;ensembl_end_phase=1;rank=3 chr14 ensembl protein_coding_gene 978103 983012 . - . ID=Thaps10006;biotype=protein_coding;description=Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8CCW8];external_name=Thaps10006;logic_name=jgi_thaps3 chr14 ensembl transcript 978103 983012 . - . ID=Thaps10006;Parent=Thaps10006;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 978103 978378 . - 0 ID=Thaps10006;Parent=Thaps10006;rank=7 chr14 . exon 978103 978378 . - . ID=Thaps10006.7;Parent=Thaps10006;constitutive=1;rank=7 chr14 . CDS 978445 978620 . - 0 ID=Thaps10006;Parent=Thaps10006;rank=6 chr14 . exon 978445 978620 . - . ID=Thaps10006.6;Parent=Thaps10006;constitutive=1;ensembl_end_phase=2;rank=6 chr14 . CDS 978717 979609 . - 0 ID=Thaps10006;Parent=Thaps10006;rank=5 chr14 . exon 978717 979609 . - . ID=Thaps10006.5;Parent=Thaps10006;constitutive=1;ensembl_end_phase=2;rank=5 chr14 . CDS 979694 980049 . - 0 ID=Thaps10006;Parent=Thaps10006;rank=4 chr14 . CDS 980128 980179 . - 0 ID=Thaps10006;Parent=Thaps10006;rank=3 chr14 . CDS 980256 980356 . - 0 ID=Thaps10006;Parent=Thaps10006;rank=2 chr14 . CDS 980448 983012 . - 0 ID=Thaps10006;Parent=Thaps10006;rank=1 chr14 ensembl protein_coding_gene 969742 970326 . + . ID=Thaps24943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCW6];external_name=Thaps24943;logic_name=jgi_thaps3 chr14 ensembl transcript 969742 970326 . + . ID=Thaps24943;Parent=Thaps24943;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 969742 970326 . + 0 ID=Thaps24943;Parent=Thaps24943;rank=1 chr14 . exon 969742 970326 . + . ID=Thaps24943.1;Parent=Thaps24943;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 974580 977589 . + . ID=Thaps264261;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCW7];external_name=Thaps264261;logic_name=jgi_thaps3 chr14 ensembl transcript 974580 977589 . + . ID=Thaps264261;Parent=Thaps264261;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 974580 976421 . + 0 ID=Thaps264261;Parent=Thaps264261;rank=1 chr14 . exon 974580 976421 . + . ID=Thaps264261.1;Parent=Thaps264261;constitutive=1;rank=1 chr14 . CDS 976509 976753 . + 0 ID=Thaps264261;Parent=Thaps264261;rank=2 chr14 . exon 976509 976753 . + . ID=Thaps264261.2;Parent=Thaps264261;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 976847 977589 . + 0 ID=Thaps264261;Parent=Thaps264261;rank=3 chr14 . exon 976847 977589 . + . ID=Thaps264261.3;Parent=Thaps264261;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . biological_region 983252 983253 0.999 + . logic_name=eponine chr14 . repeat_region 984242 984249 . ? . description=dust chr14 . repeat_region 985100 985120 . ? . description=trf chr14 . repeat_region 985100 985120 . ? . description=dust chr14 . repeat_region 988282 988318 . ? . description=trf chr14 . exon 979694 980049 . - . ID=Thaps10006.4;Parent=Thaps10006;constitutive=1;ensembl_end_phase=2;rank=4 chr14 . exon 980128 980179 . - . ID=Thaps10006.3;Parent=Thaps10006;constitutive=1;ensembl_end_phase=1;rank=3 chr14 . exon 980256 980356 . - . ID=Thaps10006.2;Parent=Thaps10006;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . exon 980448 983012 . - . ID=Thaps10006.1;Parent=Thaps10006;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 985454 987794 . + . ID=Thaps264262;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCW9];external_name=Thaps264262;logic_name=jgi_thaps3 chr14 ensembl transcript 985454 987794 . + . ID=Thaps264262;Parent=Thaps264262;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 985454 987295 . + 0 ID=Thaps264262;Parent=Thaps264262;rank=1 chr14 . exon 985454 987295 . + . ID=Thaps264262.1;Parent=Thaps264262;constitutive=1;rank=1 chr14 . CDS 987383 987627 . + 0 ID=Thaps264262;Parent=Thaps264262;rank=2 chr14 . exon 987383 987627 . + . ID=Thaps264262.2;Parent=Thaps264262;constitutive=1;ensembl_end_phase=2;rank=2 chr14 . CDS 987717 987794 . + 0 ID=Thaps264262;Parent=Thaps264262;rank=3 chr14 . exon 987717 987794 . + . ID=Thaps264262.3;Parent=Thaps264262;constitutive=1;rank=3 chr14 . repeat_region 997818 997869 . - . description=MuDR1_TP chr14 ensembl protein_coding_gene 989123 991371 . + . ID=Thaps10008;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX0];external_name=Thaps10008;logic_name=jgi_thaps3 chr14 ensembl transcript 989123 991371 . + . ID=Thaps10008;Parent=Thaps10008;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 989123 989266 . + 0 ID=Thaps10008;Parent=Thaps10008;rank=1 chr14 . exon 989123 989266 . + . ID=Thaps10008.1;Parent=Thaps10008;constitutive=1;rank=1 chr14 . CDS 989300 989533 . + 0 ID=Thaps10008;Parent=Thaps10008;rank=2 chr14 . exon 989300 989533 . + . ID=Thaps10008.2;Parent=Thaps10008;constitutive=1;rank=2 chr14 . CDS 989851 991371 . + 0 ID=Thaps10008;Parent=Thaps10008;rank=3 chr14 . exon 989851 991371 . + . ID=Thaps10008.3;Parent=Thaps10008;constitutive=1;rank=3 chr14 ensembl protein_coding_gene 996335 996826 . - . ID=Thaps10010;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX2];external_name=Thaps10010;logic_name=jgi_thaps3 chr14 ensembl transcript 996335 996826 . - . ID=Thaps10010;Parent=Thaps10010;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 996335 996826 . - 0 ID=Thaps10010;Parent=Thaps10010;rank=1 chr14 . exon 996335 996826 . - . ID=Thaps10010.1;Parent=Thaps10010;constitutive=1;rank=1 chr14 ensembl protein_coding_gene 993219 995758 . - . ID=Thaps24946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CCX1];external_name=Thaps24946;logic_name=jgi_thaps3 chr14 ensembl transcript 993219 995758 . - . ID=Thaps24946;Parent=Thaps24946;biotype=protein_coding;logic_name=jgi_thaps3 chr14 . CDS 993219 993571 . - 0 ID=Thaps24946;Parent=Thaps24946;rank=3 chr14 . exon 993219 993571 . - . ID=Thaps24946.3;Parent=Thaps24946;constitutive=1;ensembl_end_phase=2;rank=3 chr14 . CDS 993663 994287 . - 0 ID=Thaps24946;Parent=Thaps24946;rank=2 chr14 . exon 993663 994287 . - . ID=Thaps24946.2;Parent=Thaps24946;constitutive=1;ensembl_end_phase=1;rank=2 chr14 . CDS 994322 995758 . - 0 ID=Thaps24946;Parent=Thaps24946;rank=1 chr14 . exon 994322 995758 . - . ID=Thaps24946.1;Parent=Thaps24946;constitutive=1;rank=1 ##gff-version 3 ##sequence-region 13 1 1052196 chr13 . repeat_region 1 71 . ? . description=trf chr13 . repeat_region 1 71 . ? . description=dust chr13 . repeat_region 91 117 . ? . description=trf chr13 . repeat_region 488 732 . ? . description=dust chr13 . repeat_region 492 730 . ? . description=trf chr13 . repeat_region 733 804 . ? . description=trf chr13 . repeat_region 939 1036 . ? . description=trf chr13 . repeat_region 4074 4081 . ? . description=dust chr13 . repeat_region 4491 4498 . ? . description=dust chr13 ensembl protein_coding_gene 2750 3481 . - . ID=Thaps263953;biotype=protein_coding;description=Guanylate cyclase [Source:UniProtKB/TrEMBL%3BAcc:B8CAV8];external_name=Thaps263953;logic_name=jgi_thaps3 chr13 ensembl transcript 2750 3481 . - . ID=Thaps263953;Parent=Thaps263953;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 2750 2933 . - 0 ID=Thaps263953;Parent=Thaps263953;rank=2 chr13 . exon 2750 2933 . - . ID=Thaps263953.2;Parent=Thaps263953;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 3016 3481 . - 0 ID=Thaps263953;Parent=Thaps263953;rank=1 chr13 . exon 3016 3481 . - . ID=Thaps263953.1;Parent=Thaps263953;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 9369 10576 . - . ID=Thaps37197;biotype=protein_coding;description=Rna-binding protein of the pumilio family [Source:UniProtKB/TrEMBL%3BAcc:B8CAW0];external_name=Thaps37197;logic_name=jgi_thaps3 chr13 ensembl transcript 9369 10576 . - . ID=Thaps37197;Parent=Thaps37197;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 9369 9520 . - 0 ID=Thaps37197;Parent=Thaps37197;rank=3 chr13 . exon 9369 9520 . - . ID=Thaps37197.3;Parent=Thaps37197;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 9626 10224 . - 0 ID=Thaps37197;Parent=Thaps37197;rank=2 chr13 . exon 9626 10224 . - . ID=Thaps37197.2;Parent=Thaps37197;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 10305 10576 . - 0 ID=Thaps37197;Parent=Thaps37197;rank=1 chr13 ensembl protein_coding_gene 7770 8934 . + . ID=Thaps9282;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAV9];external_name=Thaps9282;logic_name=jgi_thaps3 chr13 ensembl transcript 7770 8934 . + . ID=Thaps9282;Parent=Thaps9282;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 7770 8170 . + 0 ID=Thaps9282;Parent=Thaps9282;rank=1 chr13 . exon 7770 8170 . + . ID=Thaps9282.1;Parent=Thaps9282;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 8271 8934 . + 0 ID=Thaps9282;Parent=Thaps9282;rank=2 chr13 . exon 8271 8934 . + . ID=Thaps9282.2;Parent=Thaps9282;constitutive=1;ensembl_end_phase=1;rank=2 chr13 ensembl protein_coding_gene 17373 20324 . - . ID=Thaps24575;biotype=protein_coding;description=Membrane guanylyl cyclase [Source:UniProtKB/TrEMBL%3BAcc:B8CAW2];external_name=Thaps24575;logic_name=jgi_thaps3 chr13 ensembl transcript 17373 20324 . - . ID=Thaps24575;Parent=Thaps24575;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 17373 17487 . - 0 ID=Thaps24575;Parent=Thaps24575;rank=7 chr13 . exon 17373 17487 . - . ID=Thaps24575.7;Parent=Thaps24575;constitutive=1;ensembl_end_phase=1;rank=7 chr13 . CDS 17579 17741 . - 0 ID=Thaps24575;Parent=Thaps24575;rank=6 chr13 . exon 17579 17741 . - . ID=Thaps24575.6;Parent=Thaps24575;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . CDS 17833 18401 . - 0 ID=Thaps24575;Parent=Thaps24575;rank=5 chr13 . exon 17833 18401 . - . ID=Thaps24575.5;Parent=Thaps24575;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 18490 18875 . - 0 ID=Thaps24575;Parent=Thaps24575;rank=4 chr13 . exon 18490 18875 . - . ID=Thaps24575.4;Parent=Thaps24575;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 18978 19201 . - 0 ID=Thaps24575;Parent=Thaps24575;rank=3 chr13 . exon 18978 19201 . - . ID=Thaps24575.3;Parent=Thaps24575;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 19303 19453 . - 0 ID=Thaps24575;Parent=Thaps24575;rank=2 chr13 . exon 19303 19453 . - . ID=Thaps24575.2;Parent=Thaps24575;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 19548 20324 . - 0 ID=Thaps24575;Parent=Thaps24575;rank=1 chr13 . exon 19548 20324 . - . ID=Thaps24575.1;Parent=Thaps24575;constitutive=1;rank=1 chr13 . exon 10305 10576 . - . ID=Thaps37197.1;Parent=Thaps37197;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 13831 15327 . - . ID=Thaps9284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAW1];external_name=Thaps9284;logic_name=jgi_thaps3 chr13 ensembl transcript 13831 15327 . - . ID=Thaps9284;Parent=Thaps9284;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 13831 13945 . - 0 ID=Thaps9284;Parent=Thaps9284;rank=4 chr13 . exon 13831 13945 . - . ID=Thaps9284.4;Parent=Thaps9284;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 14037 14199 . - 0 ID=Thaps9284;Parent=Thaps9284;rank=3 chr13 . exon 14037 14199 . - . ID=Thaps9284.3;Parent=Thaps9284;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 14291 14859 . - 0 ID=Thaps9284;Parent=Thaps9284;rank=2 chr13 . exon 14291 14859 . - . ID=Thaps9284.2;Parent=Thaps9284;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 14948 15327 . - 0 ID=Thaps9284;Parent=Thaps9284;rank=1 chr13 . exon 14948 15327 . - . ID=Thaps9284.1;Parent=Thaps9284;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 25350 28336 . - . ID=Thaps24576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAW5];external_name=Thaps24576;logic_name=jgi_thaps3 chr13 ensembl transcript 25350 28336 . - . ID=Thaps24576;Parent=Thaps24576;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 25350 26261 . - 0 ID=Thaps24576;Parent=Thaps24576;rank=4 chr13 . exon 25350 26261 . - . ID=Thaps24576.4;Parent=Thaps24576;constitutive=1;rank=4 chr13 . CDS 26335 26347 . - 0 ID=Thaps24576;Parent=Thaps24576;rank=3 chr13 . exon 26335 26347 . - . ID=Thaps24576.3;Parent=Thaps24576;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 26546 27326 . - 0 ID=Thaps24576;Parent=Thaps24576;rank=2 chr13 . exon 26546 27326 . - . ID=Thaps24576.2;Parent=Thaps24576;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 27418 28336 . - 0 ID=Thaps24576;Parent=Thaps24576;rank=1 chr13 . exon 27418 28336 . - . ID=Thaps24576.1;Parent=Thaps24576;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 21433 23102 . - . ID=Thaps9286;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAW3];external_name=Thaps9286;logic_name=jgi_thaps3 chr13 ensembl transcript 21433 23102 . - . ID=Thaps9286;Parent=Thaps9286;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 21433 21650 . - 0 ID=Thaps9286;Parent=Thaps9286;rank=4 chr13 . exon 21433 21650 . - . ID=Thaps9286.4;Parent=Thaps9286;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 21741 22016 . - 0 ID=Thaps9286;Parent=Thaps9286;rank=3 chr13 . exon 21741 22016 . - . ID=Thaps9286.3;Parent=Thaps9286;constitutive=1;rank=3 chr13 . CDS 22096 22412 . - 0 ID=Thaps9286;Parent=Thaps9286;rank=2 chr13 . exon 22096 22412 . - . ID=Thaps9286.2;Parent=Thaps9286;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 22522 23102 . - 0 ID=Thaps9286;Parent=Thaps9286;rank=1 chr13 . exon 22522 23102 . - . ID=Thaps9286.1;Parent=Thaps9286;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 23475 25185 . + . ID=Thaps9287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAW4];external_name=Thaps9287;logic_name=jgi_thaps3 chr13 ensembl transcript 23475 25185 . + . ID=Thaps9287;Parent=Thaps9287;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 23475 23868 . + 0 ID=Thaps9287;Parent=Thaps9287;rank=1 chr13 . exon 23475 23868 . + . ID=Thaps9287.1;Parent=Thaps9287;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 23894 25185 . + 0 ID=Thaps9287;Parent=Thaps9287;rank=2 chr13 . exon 23894 25185 . + . ID=Thaps9287.2;Parent=Thaps9287;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 28697 30390 . + . ID=Thaps9289;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAW6];external_name=Thaps9289;logic_name=jgi_thaps3 chr13 ensembl transcript 28697 30390 . + . ID=Thaps9289;Parent=Thaps9289;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 28697 29150 . + 0 ID=Thaps9289;Parent=Thaps9289;rank=1 chr13 . exon 28697 29150 . + . ID=Thaps9289.1;Parent=Thaps9289;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 29208 29402 . + 0 ID=Thaps9289;Parent=Thaps9289;rank=2 chr13 . exon 29208 29402 . + . ID=Thaps9289.2;Parent=Thaps9289;constitutive=1;rank=2 chr13 . CDS 29493 29765 . + 0 ID=Thaps9289;Parent=Thaps9289;rank=3 chr13 . exon 29493 29765 . + . ID=Thaps9289.3;Parent=Thaps9289;constitutive=1;rank=3 chr13 . CDS 29856 29942 . + 0 ID=Thaps9289;Parent=Thaps9289;rank=4 chr13 . CDS 30044 30223 . + 0 ID=Thaps9289;Parent=Thaps9289;rank=5 chr13 . CDS 30272 30390 . + 0 ID=Thaps9289;Parent=Thaps9289;rank=6 chr13 ensembl protein_coding_gene 30779 33795 . + . ID=Thaps24577;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAW7];external_name=Thaps24577;logic_name=jgi_thaps3 chr13 ensembl transcript 30779 33795 . + . ID=Thaps24577;Parent=Thaps24577;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 30779 31850 . + 0 ID=Thaps24577;Parent=Thaps24577;rank=1 chr13 . exon 30779 31850 . + . ID=Thaps24577.1;Parent=Thaps24577;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 31942 32722 . + 0 ID=Thaps24577;Parent=Thaps24577;rank=2 chr13 . exon 31942 32722 . + . ID=Thaps24577.2;Parent=Thaps24577;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 33192 33795 . + 0 ID=Thaps24577;Parent=Thaps24577;rank=3 chr13 . exon 33192 33795 . + . ID=Thaps24577.3;Parent=Thaps24577;constitutive=1;ensembl_end_phase=1;rank=3 chr13 ensembl protein_coding_gene 38690 39766 . - . ID=Thaps29778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX0];external_name=Thaps29778;logic_name=jgi_thaps3 chr13 ensembl transcript 38690 39766 . - . ID=Thaps29778;Parent=Thaps29778;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 38690 38845 . - 0 ID=Thaps29778;Parent=Thaps29778;rank=2 chr13 . exon 38690 38845 . - . ID=Thaps29778.2;Parent=Thaps29778;constitutive=1;rank=2 chr13 . CDS 38936 39766 . - 0 ID=Thaps29778;Parent=Thaps29778;rank=1 chr13 . exon 38936 39766 . - . ID=Thaps29778.1;Parent=Thaps29778;constitutive=1;rank=1 chr13 . exon 29856 29942 . + . ID=Thaps9289.4;Parent=Thaps9289;constitutive=1;rank=4 chr13 . exon 30044 30223 . + . ID=Thaps9289.5;Parent=Thaps9289;constitutive=1;rank=5 chr13 . exon 30272 30390 . + . ID=Thaps9289.6;Parent=Thaps9289;constitutive=1;ensembl_end_phase=2;rank=6 chr13 ensembl protein_coding_gene 33999 35231 . - . ID=Thaps9291;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAW8];external_name=Thaps9291;logic_name=jgi_thaps3 chr13 ensembl transcript 33999 35231 . - . ID=Thaps9291;Parent=Thaps9291;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 33999 35231 . - 0 ID=Thaps9291;Parent=Thaps9291;rank=1 chr13 . exon 33999 35231 . - . ID=Thaps9291.1;Parent=Thaps9291;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 35923 37504 . + . ID=Thaps9292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAW9];external_name=Thaps9292;logic_name=jgi_thaps3 chr13 ensembl transcript 35923 37504 . + . ID=Thaps9292;Parent=Thaps9292;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 35923 37301 . + 0 ID=Thaps9292;Parent=Thaps9292;rank=1 chr13 . exon 35923 37301 . + . ID=Thaps9292.1;Parent=Thaps9292;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 37345 37504 . + 0 ID=Thaps9292;Parent=Thaps9292;rank=2 chr13 . exon 37345 37504 . + . ID=Thaps9292.2;Parent=Thaps9292;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . repeat_region 47055 47062 . ? . description=dust chr13 ensembl protein_coding_gene 49381 52063 . - . ID=Thaps24580;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX1];external_name=Thaps24580;logic_name=jgi_thaps3 chr13 ensembl transcript 49381 52063 . - . ID=Thaps24580;Parent=Thaps24580;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 49381 50004 . - 0 ID=Thaps24580;Parent=Thaps24580;rank=3 chr13 . exon 49381 50004 . - . ID=Thaps24580.3;Parent=Thaps24580;constitutive=1;rank=3 chr13 . CDS 50074 50973 . - 0 ID=Thaps24580;Parent=Thaps24580;rank=2 chr13 . CDS 51092 52063 . - 0 ID=Thaps24580;Parent=Thaps24580;rank=1 chr13 . repeat_region 55955 55977 . ? . description=trf chr13 . repeat_region 56036 56105 . ? . description=trf chr13 . exon 50074 50973 . - . ID=Thaps24580.2;Parent=Thaps24580;constitutive=1;rank=2 chr13 . exon 51092 52063 . - . ID=Thaps24580.1;Parent=Thaps24580;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 53747 53925 . - . ID=Thaps263961;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX2];external_name=MYB14;logic_name=jgi_thaps3 chr13 ensembl transcript 53747 53925 . - . ID=Thaps263961;Parent=Thaps263961;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 53747 53925 . - 0 ID=Thaps263961;Parent=Thaps263961;rank=1 chr13 . exon 53747 53925 . - . ID=Thaps263961.1;Parent=Thaps263961;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 56016 57520 . + . ID=Thaps37047;biotype=protein_coding;description=RanGAP%2C ran-binding protein 1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX3];external_name=Thaps37047;logic_name=jgi_thaps3 chr13 ensembl transcript 56016 57520 . + . ID=Thaps37047;Parent=Thaps37047;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 56016 56177 . + 0 ID=Thaps37047;Parent=Thaps37047;rank=1 chr13 . exon 56016 56177 . + . ID=Thaps37047.1;Parent=Thaps37047;constitutive=1;rank=1 chr13 . CDS 56595 56639 . + 0 ID=Thaps37047;Parent=Thaps37047;rank=2 chr13 . exon 56595 56639 . + . ID=Thaps37047.2;Parent=Thaps37047;constitutive=1;rank=2 chr13 . CDS 57164 57520 . + 0 ID=Thaps37047;Parent=Thaps37047;rank=3 chr13 . exon 57164 57520 . + . ID=Thaps37047.3;Parent=Thaps37047;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 58425 60132 . + . ID=Thaps9297;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX4];external_name=Thaps9297;logic_name=jgi_thaps3 chr13 ensembl transcript 58425 60132 . + . ID=Thaps9297;Parent=Thaps9297;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 58425 58704 . + 0 ID=Thaps9297;Parent=Thaps9297;rank=1 chr13 . exon 58425 58704 . + . ID=Thaps9297.1;Parent=Thaps9297;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 58918 58976 . + 0 ID=Thaps9297;Parent=Thaps9297;rank=2 chr13 . exon 58918 58976 . + . ID=Thaps9297.2;Parent=Thaps9297;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 59103 60095 . + 0 ID=Thaps9297;Parent=Thaps9297;rank=3 chr13 . exon 59103 60095 . + . ID=Thaps9297.3;Parent=Thaps9297;constitutive=1;rank=3 chr13 . CDS 60124 60132 . + 0 ID=Thaps9297;Parent=Thaps9297;rank=4 chr13 ensembl protein_coding_gene 62973 64424 . - . ID=Thaps24583;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX7];external_name=Thaps24583;logic_name=jgi_thaps3 chr13 ensembl transcript 62973 64424 . - . ID=Thaps24583;Parent=Thaps24583;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 62973 64424 . - 0 ID=Thaps24583;Parent=Thaps24583;rank=1 chr13 . exon 62973 64424 . - . ID=Thaps24583.1;Parent=Thaps24583;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 67798 68874 . + . ID=Thaps24584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX9];external_name=Thaps24584;logic_name=jgi_thaps3 chr13 ensembl transcript 67798 68874 . + . ID=Thaps24584;Parent=Thaps24584;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 67798 68874 . + 0 ID=Thaps24584;Parent=Thaps24584;rank=1 chr13 . exon 67798 68874 . + . ID=Thaps24584.1;Parent=Thaps24584;constitutive=1;rank=1 chr13 . exon 60124 60132 . + . ID=Thaps9297.4;Parent=Thaps9297;constitutive=1;rank=4 chr13 ensembl protein_coding_gene 60354 61308 . - . ID=Thaps9298;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX5];external_name=Thaps9298;logic_name=jgi_thaps3 chr13 ensembl transcript 60354 61308 . - . ID=Thaps9298;Parent=Thaps9298;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 60354 60554 . - 0 ID=Thaps9298;Parent=Thaps9298;rank=2 chr13 . exon 60354 60554 . - . ID=Thaps9298.2;Parent=Thaps9298;constitutive=1;rank=2 chr13 . CDS 60655 61308 . - 0 ID=Thaps9298;Parent=Thaps9298;rank=1 chr13 . exon 60655 61308 . - . ID=Thaps9298.1;Parent=Thaps9298;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 61772 62791 . + . ID=Thaps9299;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX6];external_name=Thaps9299;logic_name=jgi_thaps3 chr13 ensembl transcript 61772 62791 . + . ID=Thaps9299;Parent=Thaps9299;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 61772 62791 . + 0 ID=Thaps9299;Parent=Thaps9299;rank=1 chr13 . exon 61772 62791 . + . ID=Thaps9299.1;Parent=Thaps9299;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 65378 65989 . + . ID=Thaps9301;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAX8];external_name=Thaps9301;logic_name=jgi_thaps3 chr13 ensembl transcript 65378 65989 . + . ID=Thaps9301;Parent=Thaps9301;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 65378 65989 . + 0 ID=Thaps9301;Parent=Thaps9301;rank=1 chr13 . exon 65378 65989 . + . ID=Thaps9301.1;Parent=Thaps9301;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 69054 69985 . - . ID=Thaps9303;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAY0];external_name=Thaps9303;logic_name=jgi_thaps3 chr13 ensembl transcript 69054 69985 . - . ID=Thaps9303;Parent=Thaps9303;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 69054 69692 . - 0 ID=Thaps9303;Parent=Thaps9303;rank=2 chr13 . exon 69054 69692 . - . ID=Thaps9303.2;Parent=Thaps9303;constitutive=1;rank=2 chr13 . CDS 69848 69985 . - 0 ID=Thaps9303;Parent=Thaps9303;rank=1 chr13 . repeat_region 74687 74738 . - . description=TE1A_TP chr13 . repeat_region 77501 77550 . ? . description=trf chr13 . repeat_region 77822 77891 . + . description=Copia6LTR_TP chr13 . repeat_region 78827 78965 . - . description=Harbinger1_TP chr13 ensembl protein_coding_gene 72726 74612 . - . ID=Thaps263963;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAY2];external_name=Thaps263963;logic_name=jgi_thaps3 chr13 ensembl transcript 72726 74612 . - . ID=Thaps263963;Parent=Thaps263963;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 72726 72829 . - 0 ID=Thaps263963;Parent=Thaps263963;rank=4 chr13 . exon 72726 72829 . - . ID=Thaps263963.4;Parent=Thaps263963;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 72866 73065 . - 0 ID=Thaps263963;Parent=Thaps263963;rank=3 chr13 . exon 72866 73065 . - . ID=Thaps263963.3;Parent=Thaps263963;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 73105 73186 . - 0 ID=Thaps263963;Parent=Thaps263963;rank=2 chr13 . exon 73105 73186 . - . ID=Thaps263963.2;Parent=Thaps263963;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 73208 74612 . - 0 ID=Thaps263963;Parent=Thaps263963;rank=1 chr13 . exon 73208 74612 . - . ID=Thaps263963.1;Parent=Thaps263963;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . exon 69848 69985 . - . ID=Thaps9303.1;Parent=Thaps9303;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 70258 71266 . + . ID=Thaps9304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAY1];external_name=Thaps9304;logic_name=jgi_thaps3 chr13 ensembl transcript 70258 71266 . + . ID=Thaps9304;Parent=Thaps9304;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 70258 70390 . + 0 ID=Thaps9304;Parent=Thaps9304;rank=1 chr13 . exon 70258 70390 . + . ID=Thaps9304.1;Parent=Thaps9304;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 70635 71266 . + 0 ID=Thaps9304;Parent=Thaps9304;rank=2 chr13 . exon 70635 71266 . + . ID=Thaps9304.2;Parent=Thaps9304;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 77947 78432 . + . ID=Thaps9306;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAY3];external_name=Thaps9306;logic_name=jgi_thaps3 chr13 ensembl transcript 77947 78432 . + . ID=Thaps9306;Parent=Thaps9306;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 77947 78432 . + 0 ID=Thaps9306;Parent=Thaps9306;rank=1 chr13 . exon 77947 78432 . + . ID=Thaps9306.1;Parent=Thaps9306;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 79356 80278 . + . ID=Thaps9307;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAY4];external_name=Thaps9307;logic_name=jgi_thaps3 chr13 ensembl transcript 79356 80278 . + . ID=Thaps9307;Parent=Thaps9307;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 79356 80127 . + 0 ID=Thaps9307;Parent=Thaps9307;rank=1 chr13 . exon 79356 80127 . + . ID=Thaps9307.1;Parent=Thaps9307;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 80241 80278 . + 0 ID=Thaps9307;Parent=Thaps9307;rank=2 chr13 . repeat_region 80331 82601 . - . description=Copia7I_TP chr13 . exon 80241 80278 . + . ID=Thaps9307.2;Parent=Thaps9307;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 83056 84213 . - . ID=Thaps9308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAY5];external_name=Thaps9308;logic_name=jgi_thaps3 chr13 ensembl transcript 83056 84213 . - . ID=Thaps9308;Parent=Thaps9308;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 83056 83693 . - 0 ID=Thaps9308;Parent=Thaps9308;rank=3 chr13 . exon 83056 83693 . - . ID=Thaps9308.3;Parent=Thaps9308;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 83778 84067 . - 0 ID=Thaps9308;Parent=Thaps9308;rank=2 chr13 . exon 83778 84067 . - . ID=Thaps9308.2;Parent=Thaps9308;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 84170 84213 . - 0 ID=Thaps9308;Parent=Thaps9308;rank=1 chr13 . exon 84170 84213 . - . ID=Thaps9308.1;Parent=Thaps9308;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 85362 86627 . + . ID=Thaps9309;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAY6];external_name=Thaps9309;logic_name=jgi_thaps3 chr13 ensembl transcript 85362 86627 . + . ID=Thaps9309;Parent=Thaps9309;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 85362 86627 . + 0 ID=Thaps9309;Parent=Thaps9309;rank=1 chr13 . exon 85362 86627 . + . ID=Thaps9309.1;Parent=Thaps9309;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 88189 90234 . + . ID=Thaps9310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAY7];external_name=Thaps9310;logic_name=jgi_thaps3 chr13 ensembl transcript 88189 90234 . + . ID=Thaps9310;Parent=Thaps9310;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 88189 90234 . + 0 ID=Thaps9310;Parent=Thaps9310;rank=1 chr13 . exon 88189 90234 . + . ID=Thaps9310.1;Parent=Thaps9310;constitutive=1;rank=1 chr13 . repeat_region 90712 90957 . + . description=Copia1LTR_TP chr13 . repeat_region 90958 95515 . + . description=Copia1I_TP chr13 . repeat_region 95516 95762 . + . description=Copia1LTR_TP chr13 ensembl protein_coding_gene 98476 99910 . - . ID=Thaps24585;biotype=protein_coding;description=Syntaxin%2C t-snare coiled-coil domain family [Source:UniProtKB/TrEMBL%3BAcc:B8CAY9];external_name=Thaps24585;logic_name=jgi_thaps3 chr13 ensembl transcript 98476 99910 . - . ID=Thaps24585;Parent=Thaps24585;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 98476 99174 . - 0 ID=Thaps24585;Parent=Thaps24585;rank=2 chr13 . exon 98476 99174 . - . ID=Thaps24585.2;Parent=Thaps24585;constitutive=1;rank=2 chr13 . CDS 99353 99910 . - 0 ID=Thaps24585;Parent=Thaps24585;rank=1 chr13 ensembl protein_coding_gene 96081 96789 . - . ID=Thaps9311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAY8];external_name=Thaps9311;logic_name=jgi_thaps3 chr13 ensembl transcript 96081 96789 . - . ID=Thaps9311;Parent=Thaps9311;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 96081 96217 . - 0 ID=Thaps9311;Parent=Thaps9311;rank=2 chr13 . exon 96081 96217 . - . ID=Thaps9311.2;Parent=Thaps9311;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 96345 96789 . - 0 ID=Thaps9311;Parent=Thaps9311;rank=1 chr13 . exon 96345 96789 . - . ID=Thaps9311.1;Parent=Thaps9311;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . repeat_region 100003 100013 . ? . description=dust chr13 . repeat_region 100218 100268 . ? . description=dust chr13 . repeat_region 102372 102398 . ? . description=trf chr13 . repeat_region 102627 102637 . ? . description=dust chr13 . repeat_region 105191 105199 . ? . description=dust chr13 . exon 99353 99910 . - . ID=Thaps24585.1;Parent=Thaps24585;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 103761 105269 . - . ID=Thaps24587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAZ2];external_name=Thaps24587;logic_name=jgi_thaps3 chr13 ensembl transcript 103761 105269 . - . ID=Thaps24587;Parent=Thaps24587;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 103761 105269 . - 0 ID=Thaps24587;Parent=Thaps24587;rank=1 chr13 . exon 103761 105269 . - . ID=Thaps24587.1;Parent=Thaps24587;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 105487 106343 . + . ID=Thaps24588;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAZ3];external_name=Thaps24588;logic_name=jgi_thaps3 chr13 ensembl transcript 105487 106343 . + . ID=Thaps24588;Parent=Thaps24588;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 105487 105711 . + 0 ID=Thaps24588;Parent=Thaps24588;rank=1 chr13 . exon 105487 105711 . + . ID=Thaps24588.1;Parent=Thaps24588;constitutive=1;rank=1 chr13 . CDS 105960 106343 . + 0 ID=Thaps24588;Parent=Thaps24588;rank=2 chr13 . exon 105960 106343 . + . ID=Thaps24588.2;Parent=Thaps24588;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 100268 101035 . + . ID=Thaps29782;biotype=protein_coding;description=Eukaryotic translation initiation factor 6 [Source:UniProtKB/TrEMBL%3BAcc:B8CAZ0];external_name=EIF6;logic_name=jgi_thaps3 chr13 ensembl transcript 100268 101035 . + . ID=Thaps29782;Parent=Thaps29782;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 100268 101035 . + 0 ID=Thaps29782;Parent=Thaps29782;rank=1 chr13 . exon 100268 101035 . + . ID=Thaps29782.1;Parent=Thaps29782;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 107416 107816 . + . ID=Thaps37120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAZ4];external_name=Thaps37120;logic_name=jgi_thaps3 chr13 ensembl transcript 107416 107816 . + . ID=Thaps37120;Parent=Thaps37120;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 107416 107497 . + 0 ID=Thaps37120;Parent=Thaps37120;rank=1 chr13 . exon 107416 107497 . + . ID=Thaps37120.1;Parent=Thaps37120;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 107617 107816 . + 0 ID=Thaps37120;Parent=Thaps37120;rank=2 chr13 . exon 107617 107816 . + . ID=Thaps37120.2;Parent=Thaps37120;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 101370 102434 . - . ID=Thaps9314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAZ1];external_name=Thaps9314;logic_name=jgi_thaps3 chr13 ensembl transcript 101370 102434 . - . ID=Thaps9314;Parent=Thaps9314;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 101370 102434 . - 0 ID=Thaps9314;Parent=Thaps9314;rank=1 chr13 . exon 101370 102434 . - . ID=Thaps9314.1;Parent=Thaps9314;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 112204 115718 . - . ID=Thaps24590;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAZ6];external_name=Thaps24590;logic_name=jgi_thaps3 chr13 ensembl transcript 112204 115718 . - . ID=Thaps24590;Parent=Thaps24590;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 112204 112428 . - 0 ID=Thaps24590;Parent=Thaps24590;rank=3 chr13 . exon 112204 112428 . - . ID=Thaps24590.3;Parent=Thaps24590;constitutive=1;rank=3 chr13 . CDS 112529 115024 . - 0 ID=Thaps24590;Parent=Thaps24590;rank=2 chr13 . exon 112529 115024 . - . ID=Thaps24590.2;Parent=Thaps24590;constitutive=1;rank=2 chr13 . CDS 115176 115718 . - 0 ID=Thaps24590;Parent=Thaps24590;rank=1 chr13 . exon 115176 115718 . - . ID=Thaps24590.1;Parent=Thaps24590;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 118751 119101 . - . ID=Thaps37166;biotype=protein_coding;description=RK17%2C ribosomal protein 17 50S large ribosomal subunit%2C chloroplast [Source:UniProtKB/TrEMBL%3BAcc:B8CAZ9];external_name=RK17;logic_name=jgi_thaps3 chr13 ensembl transcript 118751 119101 . - . ID=Thaps37166;Parent=Thaps37166;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 118751 119101 . - 0 ID=Thaps37166;Parent=Thaps37166;rank=1 chr13 . exon 118751 119101 . - . ID=Thaps37166.1;Parent=Thaps37166;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 116518 117049 . - . ID=Thaps42169;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAZ7];external_name=Thaps42169;logic_name=jgi_thaps3 chr13 ensembl transcript 116518 117049 . - . ID=Thaps42169;Parent=Thaps42169;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 116518 116661 . - 0 ID=Thaps42169;Parent=Thaps42169;rank=2 chr13 . exon 116518 116661 . - . ID=Thaps42169.2;Parent=Thaps42169;constitutive=1;rank=2 chr13 . CDS 116996 117049 . - 0 ID=Thaps42169;Parent=Thaps42169;rank=1 chr13 . exon 116996 117049 . - . ID=Thaps42169.1;Parent=Thaps42169;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 109536 110988 . - . ID=Thaps9318;biotype=protein_coding;description=Elongation factor Ts 2%2C mitochondrial [Source:UniProtKB/Swiss-Prot%3BAcc:B8CAZ5];external_name=Thaps9318;logic_name=jgi_thaps3 chr13 ensembl transcript 109536 110988 . - . ID=Thaps9318;Parent=Thaps9318;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 109536 109727 . - 0 ID=Thaps9318;Parent=Thaps9318;rank=2 chr13 . exon 109536 109727 . - . ID=Thaps9318.2;Parent=Thaps9318;constitutive=1;rank=2 chr13 . CDS 109846 110988 . - 0 ID=Thaps9318;Parent=Thaps9318;rank=1 chr13 . exon 109846 110988 . - . ID=Thaps9318.1;Parent=Thaps9318;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 117529 118288 . + . ID=Thaps9321;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAZ8];external_name=Thaps9321;logic_name=jgi_thaps3 chr13 ensembl transcript 117529 118288 . + . ID=Thaps9321;Parent=Thaps9321;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 117529 117594 . + 0 ID=Thaps9321;Parent=Thaps9321;rank=1 chr13 . exon 117529 117594 . + . ID=Thaps9321.1;Parent=Thaps9321;constitutive=1;rank=1 chr13 . CDS 117806 118288 . + 0 ID=Thaps9321;Parent=Thaps9321;rank=2 chr13 . exon 117806 118288 . + . ID=Thaps9321.2;Parent=Thaps9321;constitutive=1;rank=2 chr13 . repeat_region 119108 119156 . ? . description=dust chr13 . repeat_region 119110 119142 . ? . description=trf chr13 . repeat_region 119404 119418 . ? . description=dust chr13 . repeat_region 120107 120134 . ? . description=trf chr13 . repeat_region 120107 120134 . ? . description=dust chr13 . repeat_region 127025 127048 . ? . description=trf chr13 . repeat_region 127025 127048 . ? . description=dust chr13 . repeat_region 127651 127680 . ? . description=trf chr13 . repeat_region 128527 128546 . ? . description=trf chr13 . repeat_region 128527 128546 . ? . description=dust chr13 . repeat_region 128824 128844 . ? . description=trf chr13 . repeat_region 128824 128844 . ? . description=dust chr13 ensembl protein_coding_gene 122573 123756 . - . ID=Thaps24591;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB02];external_name=Thaps24591;logic_name=jgi_thaps3 chr13 ensembl transcript 122573 123756 . - . ID=Thaps24591;Parent=Thaps24591;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 122573 123217 . - 0 ID=Thaps24591;Parent=Thaps24591;rank=2 chr13 . exon 122573 123217 . - . ID=Thaps24591.2;Parent=Thaps24591;constitutive=1;rank=2 chr13 . CDS 123343 123756 . - 0 ID=Thaps24591;Parent=Thaps24591;rank=1 chr13 . exon 123343 123756 . - . ID=Thaps24591.1;Parent=Thaps24591;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 124242 127944 . - . ID=Thaps24592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB03];external_name=Thaps24592;logic_name=jgi_thaps3 chr13 ensembl transcript 124242 127944 . - . ID=Thaps24592;Parent=Thaps24592;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 124242 124957 . - 0 ID=Thaps24592;Parent=Thaps24592;rank=3 chr13 . exon 124242 124957 . - . ID=Thaps24592.3;Parent=Thaps24592;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 125054 126995 . - 0 ID=Thaps24592;Parent=Thaps24592;rank=2 chr13 . exon 125054 126995 . - . ID=Thaps24592.2;Parent=Thaps24592;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 127165 127944 . - 0 ID=Thaps24592;Parent=Thaps24592;rank=1 chr13 . exon 127165 127944 . - . ID=Thaps24592.1;Parent=Thaps24592;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 128182 129279 . + . ID=Thaps269653;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB04];external_name=CUE10;logic_name=jgi_thaps3 chr13 ensembl transcript 128182 129279 . + . ID=Thaps269653;Parent=Thaps269653;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 128182 129279 . + 0 ID=Thaps269653;Parent=Thaps269653;rank=1 chr13 . exon 128182 129279 . + . ID=Thaps269653.1;Parent=Thaps269653;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 120909 122016 . - . ID=Thaps723;biotype=protein_coding;description=Replication factor C 36 kDa subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CB01];external_name=RFC2;logic_name=jgi_thaps3 chr13 ensembl transcript 120909 122016 . - . ID=Thaps723;Parent=Thaps723;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 120909 121733 . - 0 ID=Thaps723;Parent=Thaps723;rank=2 chr13 . exon 120909 121733 . - . ID=Thaps723.2;Parent=Thaps723;constitutive=1;rank=2 chr13 . CDS 121876 122016 . - 0 ID=Thaps723;Parent=Thaps723;rank=1 chr13 . exon 121876 122016 . - . ID=Thaps723.1;Parent=Thaps723;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 119619 120522 . + . ID=Thaps9323;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB00];external_name=Thaps9323;logic_name=jgi_thaps3 chr13 ensembl transcript 119619 120522 . + . ID=Thaps9323;Parent=Thaps9323;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 119619 119670 . + 0 ID=Thaps9323;Parent=Thaps9323;rank=1 chr13 . exon 119619 119670 . + . ID=Thaps9323.1;Parent=Thaps9323;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 120176 120522 . + 0 ID=Thaps9323;Parent=Thaps9323;rank=2 chr13 . exon 120176 120522 . + . ID=Thaps9323.2;Parent=Thaps9323;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 138407 141270 . - . ID=Thaps24594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB09];external_name=Thaps24594;logic_name=jgi_thaps3 chr13 ensembl transcript 138407 141270 . - . ID=Thaps24594;Parent=Thaps24594;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 138407 140208 . - 0 ID=Thaps24594;Parent=Thaps24594;rank=2 chr13 . exon 138407 140208 . - . ID=Thaps24594.2;Parent=Thaps24594;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 140319 141270 . - 0 ID=Thaps24594;Parent=Thaps24594;rank=1 chr13 ensembl protein_coding_gene 137359 137670 . - . ID=Thaps37058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB08];external_name=Thaps37058;logic_name=jgi_thaps3 chr13 ensembl transcript 137359 137670 . - . ID=Thaps37058;Parent=Thaps37058;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 137359 137670 . - 0 ID=Thaps37058;Parent=Thaps37058;rank=1 chr13 . exon 137359 137670 . - . ID=Thaps37058.1;Parent=Thaps37058;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 129588 130809 . - . ID=Thaps9328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB05];external_name=Thaps9328;logic_name=jgi_thaps3 chr13 ensembl transcript 129588 130809 . - . ID=Thaps9328;Parent=Thaps9328;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 129588 129626 . - 0 ID=Thaps9328;Parent=Thaps9328;rank=4 chr13 . exon 129588 129626 . - . ID=Thaps9328.4;Parent=Thaps9328;constitutive=1;rank=4 chr13 . CDS 129842 130137 . - 0 ID=Thaps9328;Parent=Thaps9328;rank=3 chr13 . exon 129842 130137 . - . ID=Thaps9328.3;Parent=Thaps9328;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 130213 130338 . - 0 ID=Thaps9328;Parent=Thaps9328;rank=2 chr13 . exon 130213 130338 . - . ID=Thaps9328.2;Parent=Thaps9328;constitutive=1;rank=2 chr13 . CDS 130473 130809 . - 0 ID=Thaps9328;Parent=Thaps9328;rank=1 chr13 . exon 130473 130809 . - . ID=Thaps9328.1;Parent=Thaps9328;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 131174 131881 . - . ID=Thaps9329;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB06];external_name=Thaps9329;logic_name=jgi_thaps3 chr13 ensembl transcript 131174 131881 . - . ID=Thaps9329;Parent=Thaps9329;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 131174 131881 . - 0 ID=Thaps9329;Parent=Thaps9329;rank=1 chr13 . exon 131174 131881 . - . ID=Thaps9329.1;Parent=Thaps9329;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 132329 137091 . + . ID=Thaps9330;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB07];external_name=Thaps9330;logic_name=jgi_thaps3 chr13 ensembl transcript 132329 137091 . + . ID=Thaps9330;Parent=Thaps9330;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 132329 136894 . + 0 ID=Thaps9330;Parent=Thaps9330;rank=1 chr13 . exon 132329 136894 . + . ID=Thaps9330.1;Parent=Thaps9330;constitutive=1;rank=1 chr13 . CDS 136984 137091 . + 0 ID=Thaps9330;Parent=Thaps9330;rank=2 chr13 . exon 136984 137091 . + . ID=Thaps9330.2;Parent=Thaps9330;constitutive=1;rank=2 chr13 . repeat_region 142653 142676 . ? . description=trf chr13 . repeat_region 142653 142676 . ? . description=dust chr13 . repeat_region 145632 145653 . ? . description=trf chr13 . repeat_region 146067 146107 . ? . description=dust chr13 . repeat_region 146205 146232 . ? . description=trf chr13 . exon 140319 141270 . - . ID=Thaps24594.1;Parent=Thaps24594;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 142010 142652 . + . ID=Thaps24595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB10];external_name=Thaps24595;logic_name=jgi_thaps3 chr13 ensembl transcript 142010 142652 . + . ID=Thaps24595;Parent=Thaps24595;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 142010 142275 . + 0 ID=Thaps24595;Parent=Thaps24595;rank=1 chr13 . exon 142010 142275 . + . ID=Thaps24595.1;Parent=Thaps24595;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 142397 142652 . + 0 ID=Thaps24595;Parent=Thaps24595;rank=2 chr13 . exon 142397 142652 . + . ID=Thaps24595.2;Parent=Thaps24595;constitutive=1;ensembl_end_phase=1;rank=2 chr13 ensembl protein_coding_gene 143387 150055 . + . ID=Thaps24596;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB11];external_name=Thaps24596;logic_name=jgi_thaps3 chr13 ensembl transcript 143387 150055 . + . ID=Thaps24596;Parent=Thaps24596;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 143387 143690 . + 0 ID=Thaps24596;Parent=Thaps24596;rank=1 chr13 . exon 143387 143690 . + . ID=Thaps24596.1;Parent=Thaps24596;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 143803 144257 . + 0 ID=Thaps24596;Parent=Thaps24596;rank=2 chr13 . exon 143803 144257 . + . ID=Thaps24596.2;Parent=Thaps24596;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 144321 144340 . + 0 ID=Thaps24596;Parent=Thaps24596;rank=3 chr13 . exon 144321 144340 . + . ID=Thaps24596.3;Parent=Thaps24596;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 144422 145355 . + 0 ID=Thaps24596;Parent=Thaps24596;rank=4 chr13 . exon 144422 145355 . + . ID=Thaps24596.4;Parent=Thaps24596;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 145522 146515 . + 0 ID=Thaps24596;Parent=Thaps24596;rank=5 chr13 . exon 145522 146515 . + . ID=Thaps24596.5;Parent=Thaps24596;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . CDS 146563 148076 . + 0 ID=Thaps24596;Parent=Thaps24596;rank=6 chr13 . exon 146563 148076 . + . ID=Thaps24596.6;Parent=Thaps24596;constitutive=1;ensembl_end_phase=2;rank=6 chr13 . CDS 148274 148351 . + 0 ID=Thaps24596;Parent=Thaps24596;rank=7 chr13 . exon 148274 148351 . + . ID=Thaps24596.7;Parent=Thaps24596;constitutive=1;rank=7 chr13 . CDS 148844 150055 . + 0 ID=Thaps24596;Parent=Thaps24596;rank=8 chr13 . exon 148844 150055 . + . ID=Thaps24596.8;Parent=Thaps24596;constitutive=1;rank=8 chr13 ensembl protein_coding_gene 153234 154337 . + . ID=Thaps24597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB12];external_name=Thaps24597;logic_name=jgi_thaps3 chr13 ensembl transcript 153234 154337 . + . ID=Thaps24597;Parent=Thaps24597;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 153234 153507 . + 0 ID=Thaps24597;Parent=Thaps24597;rank=1 chr13 . exon 153234 153507 . + . ID=Thaps24597.1;Parent=Thaps24597;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 153606 153764 . + 0 ID=Thaps24597;Parent=Thaps24597;rank=2 chr13 . exon 153606 153764 . + . ID=Thaps24597.2;Parent=Thaps24597;constitutive=1;rank=2 chr13 . CDS 153864 153992 . + 0 ID=Thaps24597;Parent=Thaps24597;rank=3 chr13 . exon 153864 153992 . + . ID=Thaps24597.3;Parent=Thaps24597;constitutive=1;rank=3 chr13 . CDS 154090 154337 . + 0 ID=Thaps24597;Parent=Thaps24597;rank=4 chr13 . exon 154090 154337 . + . ID=Thaps24597.4;Parent=Thaps24597;constitutive=1;ensembl_end_phase=2;rank=4 chr13 ensembl protein_coding_gene 154893 158294 . + . ID=Thaps24598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB13];external_name=Thaps24598;logic_name=jgi_thaps3 chr13 ensembl transcript 154893 158294 . + . ID=Thaps24598;Parent=Thaps24598;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 154893 155973 . + 0 ID=Thaps24598;Parent=Thaps24598;rank=1 chr13 . exon 154893 155973 . + . ID=Thaps24598.1;Parent=Thaps24598;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 156097 158294 . + 0 ID=Thaps24598;Parent=Thaps24598;rank=2 chr13 . exon 156097 158294 . + . ID=Thaps24598.2;Parent=Thaps24598;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 158491 158832 . - . ID=Thaps37100;biotype=protein_coding;description=DNA-directed RNA polymerase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CB14];external_name=Thaps37100;logic_name=jgi_thaps3 chr13 ensembl transcript 158491 158832 . - . ID=Thaps37100;Parent=Thaps37100;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 158491 158832 . - 0 ID=Thaps37100;Parent=Thaps37100;rank=1 chr13 . exon 158491 158832 . - . ID=Thaps37100.1;Parent=Thaps37100;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 162379 165471 . - . ID=Thaps24599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB16];external_name=Thaps24599;logic_name=jgi_thaps3 chr13 ensembl transcript 162379 165471 . - . ID=Thaps24599;Parent=Thaps24599;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 162379 163366 . - 0 ID=Thaps24599;Parent=Thaps24599;rank=2 chr13 . exon 162379 163366 . - . ID=Thaps24599.2;Parent=Thaps24599;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 163727 165471 . - 0 ID=Thaps24599;Parent=Thaps24599;rank=1 chr13 . exon 163727 165471 . - . ID=Thaps24599.1;Parent=Thaps24599;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 168702 170201 . - . ID=Thaps269655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB19];external_name=Thaps269655;logic_name=jgi_thaps3 chr13 ensembl transcript 168702 170201 . - . ID=Thaps269655;Parent=Thaps269655;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 168702 169727 . - 0 ID=Thaps269655;Parent=Thaps269655;rank=3 chr13 . exon 168702 169727 . - . ID=Thaps269655.3;Parent=Thaps269655;constitutive=1;rank=3 chr13 . CDS 169873 169986 . - 0 ID=Thaps269655;Parent=Thaps269655;rank=2 chr13 . CDS 170109 170201 . - 0 ID=Thaps269655;Parent=Thaps269655;rank=1 chr13 ensembl protein_coding_gene 159958 162088 . + . ID=Thaps9336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB15];external_name=Thaps9336;logic_name=jgi_thaps3 chr13 ensembl transcript 159958 162088 . + . ID=Thaps9336;Parent=Thaps9336;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 159958 161576 . + 0 ID=Thaps9336;Parent=Thaps9336;rank=1 chr13 . exon 159958 161576 . + . ID=Thaps9336.1;Parent=Thaps9336;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 161656 162088 . + 0 ID=Thaps9336;Parent=Thaps9336;rank=2 chr13 . exon 161656 162088 . + . ID=Thaps9336.2;Parent=Thaps9336;constitutive=1;ensembl_end_phase=1;rank=2 chr13 ensembl protein_coding_gene 166602 166910 . - . ID=Thaps9338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB17];external_name=Thaps9338;logic_name=jgi_thaps3 chr13 ensembl transcript 166602 166910 . - . ID=Thaps9338;Parent=Thaps9338;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 166602 166910 . - 0 ID=Thaps9338;Parent=Thaps9338;rank=1 chr13 . exon 166602 166910 . - . ID=Thaps9338.1;Parent=Thaps9338;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 167768 168406 . + . ID=Thaps9339;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB18];external_name=Thaps9339;logic_name=jgi_thaps3 chr13 ensembl transcript 167768 168406 . + . ID=Thaps9339;Parent=Thaps9339;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 167768 168406 . + 0 ID=Thaps9339;Parent=Thaps9339;rank=1 chr13 . exon 167768 168406 . + . ID=Thaps9339.1;Parent=Thaps9339;constitutive=1;rank=1 chr13 . repeat_region 169734 169753 . ? . description=dust chr13 . repeat_region 170078 170085 . ? . description=dust chr13 . repeat_region 177010 177089 . + . description=scaffold_11_209_1_533666_536693 chr13 ensembl protein_coding_gene 171002 173884 . + . ID=Thaps24601;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB20];external_name=Thaps24601;logic_name=jgi_thaps3 chr13 ensembl transcript 171002 173884 . + . ID=Thaps24601;Parent=Thaps24601;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 171002 173884 . + 0 ID=Thaps24601;Parent=Thaps24601;rank=1 chr13 . exon 171002 173884 . + . ID=Thaps24601.1;Parent=Thaps24601;constitutive=1;rank=1 chr13 . exon 169873 169986 . - . ID=Thaps269655.2;Parent=Thaps269655;constitutive=1;rank=2 chr13 . exon 170109 170201 . - . ID=Thaps269655.1;Parent=Thaps269655;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 175417 176072 . + . ID=Thaps9342;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB21];external_name=Thaps9342;logic_name=jgi_thaps3 chr13 ensembl transcript 175417 176072 . + . ID=Thaps9342;Parent=Thaps9342;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 175417 175831 . + 0 ID=Thaps9342;Parent=Thaps9342;rank=1 chr13 . exon 175417 175831 . + . ID=Thaps9342.1;Parent=Thaps9342;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 175975 176072 . + 0 ID=Thaps9342;Parent=Thaps9342;rank=2 chr13 . exon 175975 176072 . + . ID=Thaps9342.2;Parent=Thaps9342;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . repeat_region 184700 184744 . ? . description=trf chr13 . repeat_region 187188 187334 . ? . description=trf chr13 ensembl protein_coding_gene 179838 181619 . + . ID=Thaps24602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB22];external_name=Thaps24602;logic_name=jgi_thaps3 chr13 ensembl transcript 179838 181619 . + . ID=Thaps24602;Parent=Thaps24602;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 179838 181619 . + 0 ID=Thaps24602;Parent=Thaps24602;rank=1 chr13 . exon 179838 181619 . + . ID=Thaps24602.1;Parent=Thaps24602;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 183135 184448 . - . ID=Thaps24603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB24];external_name=Thaps24603;logic_name=jgi_thaps3 chr13 ensembl transcript 183135 184448 . - . ID=Thaps24603;Parent=Thaps24603;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 183135 183413 . - 0 ID=Thaps24603;Parent=Thaps24603;rank=3 chr13 . exon 183135 183413 . - . ID=Thaps24603.3;Parent=Thaps24603;constitutive=1;rank=3 chr13 . CDS 183503 184134 . - 0 ID=Thaps24603;Parent=Thaps24603;rank=2 chr13 . exon 183503 184134 . - . ID=Thaps24603.2;Parent=Thaps24603;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 184223 184448 . - 0 ID=Thaps24603;Parent=Thaps24603;rank=1 chr13 . exon 184223 184448 . - . ID=Thaps24603.1;Parent=Thaps24603;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 185558 191085 . - . ID=Thaps24604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB25];external_name=Thaps24604;logic_name=jgi_thaps3 chr13 ensembl transcript 185558 191085 . - . ID=Thaps24604;Parent=Thaps24604;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 185558 185632 . - 0 ID=Thaps24604;Parent=Thaps24604;rank=5 chr13 . exon 185558 185632 . - . ID=Thaps24604.5;Parent=Thaps24604;constitutive=1;rank=5 chr13 . CDS 185700 185771 . - 0 ID=Thaps24604;Parent=Thaps24604;rank=4 chr13 . exon 185700 185771 . - . ID=Thaps24604.4;Parent=Thaps24604;constitutive=1;rank=4 chr13 . CDS 185845 186016 . - 0 ID=Thaps24604;Parent=Thaps24604;rank=3 chr13 . exon 185845 186016 . - . ID=Thaps24604.3;Parent=Thaps24604;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 186104 187443 . - 0 ID=Thaps24604;Parent=Thaps24604;rank=2 chr13 . exon 186104 187443 . - . ID=Thaps24604.2;Parent=Thaps24604;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 187519 191085 . - 0 ID=Thaps24604;Parent=Thaps24604;rank=1 chr13 . exon 187519 191085 . - . ID=Thaps24604.1;Parent=Thaps24604;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 182073 182489 . + . ID=Thaps9345;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB23];external_name=Thaps9345;logic_name=jgi_thaps3 chr13 ensembl transcript 182073 182489 . + . ID=Thaps9345;Parent=Thaps9345;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 182073 182489 . + 0 ID=Thaps9345;Parent=Thaps9345;rank=1 chr13 . exon 182073 182489 . + . ID=Thaps9345.1;Parent=Thaps9345;constitutive=1;rank=1 chr13 . repeat_region 189287 189323 . ? . description=dust chr13 . repeat_region 196440 196463 . ? . description=dust chr13 ensembl protein_coding_gene 198247 200542 . - . ID=Thaps24606;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB27];external_name=Thaps24606;logic_name=jgi_thaps3 chr13 ensembl transcript 198247 200542 . - . ID=Thaps24606;Parent=Thaps24606;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 198247 198546 . - 0 ID=Thaps24606;Parent=Thaps24606;rank=5 chr13 . exon 198247 198546 . - . ID=Thaps24606.5;Parent=Thaps24606;constitutive=1;rank=5 chr13 . CDS 198820 198875 . - 0 ID=Thaps24606;Parent=Thaps24606;rank=4 chr13 . CDS 199083 199916 . - 0 ID=Thaps24606;Parent=Thaps24606;rank=3 chr13 . CDS 200065 200188 . - 0 ID=Thaps24606;Parent=Thaps24606;rank=2 chr13 . CDS 200222 200542 . - 0 ID=Thaps24606;Parent=Thaps24606;rank=1 chr13 ensembl protein_coding_gene 194919 195641 . - . ID=Thaps263978;biotype=protein_coding;description=Putative uncharacterized protein HSF15 [Source:UniProtKB/TrEMBL%3BAcc:B8CB26];external_name=HSF15;logic_name=jgi_thaps3 chr13 ensembl transcript 194919 195641 . - . ID=Thaps263978;Parent=Thaps263978;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 194919 195272 . - 0 ID=Thaps263978;Parent=Thaps263978;rank=2 chr13 . exon 194919 195272 . - . ID=Thaps263978.2;Parent=Thaps263978;constitutive=1;rank=2 chr13 . CDS 195387 195641 . - 0 ID=Thaps263978;Parent=Thaps263978;rank=1 chr13 . exon 195387 195641 . - . ID=Thaps263978.1;Parent=Thaps263978;constitutive=1;rank=1 chr13 . exon 198820 198875 . - . ID=Thaps24606.4;Parent=Thaps24606;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . exon 199083 199916 . - . ID=Thaps24606.3;Parent=Thaps24606;constitutive=1;rank=3 chr13 . exon 200065 200188 . - . ID=Thaps24606.2;Parent=Thaps24606;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . exon 200222 200542 . - . ID=Thaps24606.1;Parent=Thaps24606;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 202051 202852 . - . ID=Thaps263979;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB28];external_name=Thaps263979;logic_name=jgi_thaps3 chr13 ensembl transcript 202051 202852 . - . ID=Thaps263979;Parent=Thaps263979;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 202051 202631 . - 0 ID=Thaps263979;Parent=Thaps263979;rank=2 chr13 . exon 202051 202631 . - . ID=Thaps263979.2;Parent=Thaps263979;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 202650 202852 . - 0 ID=Thaps263979;Parent=Thaps263979;rank=1 chr13 . exon 202650 202852 . - . ID=Thaps263979.1;Parent=Thaps263979;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 204259 205278 . + . ID=Thaps9351;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB29];external_name=Thaps9351;logic_name=jgi_thaps3 chr13 ensembl transcript 204259 205278 . + . ID=Thaps9351;Parent=Thaps9351;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 204259 205278 . + 0 ID=Thaps9351;Parent=Thaps9351;rank=1 chr13 . exon 204259 205278 . + . ID=Thaps9351.1;Parent=Thaps9351;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 205413 207158 . + . ID=Thaps9352;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB30];external_name=Thaps9352;logic_name=jgi_thaps3 chr13 ensembl transcript 205413 207158 . + . ID=Thaps9352;Parent=Thaps9352;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 205413 205890 . + 0 ID=Thaps9352;Parent=Thaps9352;rank=1 chr13 . exon 205413 205890 . + . ID=Thaps9352.1;Parent=Thaps9352;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 205975 206045 . + 0 ID=Thaps9352;Parent=Thaps9352;rank=2 chr13 . exon 205975 206045 . + . ID=Thaps9352.2;Parent=Thaps9352;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 206130 207158 . + 0 ID=Thaps9352;Parent=Thaps9352;rank=3 chr13 . exon 206130 207158 . + . ID=Thaps9352.3;Parent=Thaps9352;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 207401 209106 . - . ID=Thaps9353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB31];external_name=Thaps9353;logic_name=jgi_thaps3 chr13 ensembl transcript 207401 209106 . - . ID=Thaps9353;Parent=Thaps9353;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 207401 207420 . - 0 ID=Thaps9353;Parent=Thaps9353;rank=5 chr13 . exon 207401 207420 . - . ID=Thaps9353.5;Parent=Thaps9353;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 207545 207970 . - 0 ID=Thaps9353;Parent=Thaps9353;rank=4 chr13 . exon 207545 207970 . - . ID=Thaps9353.4;Parent=Thaps9353;constitutive=1;rank=4 chr13 . CDS 208065 208138 . - 0 ID=Thaps9353;Parent=Thaps9353;rank=3 chr13 . exon 208065 208138 . - . ID=Thaps9353.3;Parent=Thaps9353;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 208231 208664 . - 0 ID=Thaps9353;Parent=Thaps9353;rank=2 chr13 . exon 208231 208664 . - . ID=Thaps9353.2;Parent=Thaps9353;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 208792 209106 . - 0 ID=Thaps9353;Parent=Thaps9353;rank=1 chr13 . repeat_region 210242 210280 . ? . description=trf chr13 . repeat_region 213073 213091 . ? . description=dust chr13 . repeat_region 213777 213784 . ? . description=dust chr13 ensembl snoRNA_gene 213799 213884 . + . ID=EPrTPOG00000000005;biotype=snoRNA;description=Small nucleolar RNA SNORD24 [Source:RFAM%3BAcc:RF00069];external_name=SNORD24;logic_name=ncrna_eg chr13 ensembl snoRNA 213799 213884 . + . ID=EPrTPOT00000000032;Parent=EPrTPOG00000000005;biotype=snoRNA;logic_name=ncrna_eg chr13 . exon 213799 213884 . + . ID=EPrTPOE00000000005;Parent=EPrTPOT00000000032;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 217046 218192 . - . ID=Thaps24610;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB36];external_name=Thaps24610;logic_name=jgi_thaps3 chr13 ensembl transcript 217046 218192 . - . ID=Thaps24610;Parent=Thaps24610;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 217046 217537 . - 0 ID=Thaps24610;Parent=Thaps24610;rank=2 chr13 . exon 217046 217537 . - . ID=Thaps24610.2;Parent=Thaps24610;constitutive=1;rank=2 chr13 . CDS 217641 218192 . - 0 ID=Thaps24610;Parent=Thaps24610;rank=1 chr13 . exon 217641 218192 . - . ID=Thaps24610.1;Parent=Thaps24610;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 209861 211453 . + . ID=Thaps269660;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB32];external_name=Thaps269660;logic_name=jgi_thaps3 chr13 ensembl transcript 209861 211453 . + . ID=Thaps269660;Parent=Thaps269660;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 209861 210305 . + 0 ID=Thaps269660;Parent=Thaps269660;rank=1 chr13 . exon 209861 210305 . + . ID=Thaps269660.1;Parent=Thaps269660;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 210381 210727 . + 0 ID=Thaps269660;Parent=Thaps269660;rank=2 chr13 . exon 210381 210727 . + . ID=Thaps269660.2;Parent=Thaps269660;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 210872 211453 . + 0 ID=Thaps269660;Parent=Thaps269660;rank=3 chr13 . exon 210872 211453 . + . ID=Thaps269660.3;Parent=Thaps269660;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 215608 216657 . + . ID=Thaps269662;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB35];external_name=Thaps269662;logic_name=jgi_thaps3 chr13 ensembl transcript 215608 216657 . + . ID=Thaps269662;Parent=Thaps269662;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 215608 216657 . + 0 ID=Thaps269662;Parent=Thaps269662;rank=1 chr13 . exon 215608 216657 . + . ID=Thaps269662.1;Parent=Thaps269662;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 214494 215249 . + . ID=Thaps37071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB34];external_name=Thaps37071;logic_name=jgi_thaps3 chr13 ensembl transcript 214494 215249 . + . ID=Thaps37071;Parent=Thaps37071;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 214494 214669 . + 0 ID=Thaps37071;Parent=Thaps37071;rank=1 chr13 . exon 214494 214669 . + . ID=Thaps37071.1;Parent=Thaps37071;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 214763 215249 . + 0 ID=Thaps37071;Parent=Thaps37071;rank=2 chr13 . exon 214763 215249 . + . ID=Thaps37071.2;Parent=Thaps37071;constitutive=1;ensembl_end_phase=1;rank=2 chr13 ensembl protein_coding_gene 211685 212026 . - . ID=Thaps37139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB33];external_name=Thaps37139;logic_name=jgi_thaps3 chr13 ensembl transcript 211685 212026 . - . ID=Thaps37139;Parent=Thaps37139;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 211685 212026 . - 0 ID=Thaps37139;Parent=Thaps37139;rank=1 chr13 . exon 211685 212026 . - . ID=Thaps37139.1;Parent=Thaps37139;constitutive=1;rank=1 chr13 . exon 208792 209106 . - . ID=Thaps9353.1;Parent=Thaps9353;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 222042 222950 . - . ID=Thaps17396;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB38];external_name=Thaps17396;logic_name=jgi_thaps3 chr13 ensembl transcript 222042 222950 . - . ID=Thaps17396;Parent=Thaps17396;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 222042 222122 . - 0 ID=Thaps17396;Parent=Thaps17396;rank=4 chr13 . exon 222042 222122 . - . ID=Thaps17396.4;Parent=Thaps17396;constitutive=1;rank=4 chr13 . CDS 222210 222287 . - 0 ID=Thaps17396;Parent=Thaps17396;rank=3 chr13 . exon 222210 222287 . - . ID=Thaps17396.3;Parent=Thaps17396;constitutive=1;rank=3 chr13 . CDS 222381 222540 . - 0 ID=Thaps17396;Parent=Thaps17396;rank=2 chr13 . exon 222381 222540 . - . ID=Thaps17396.2;Parent=Thaps17396;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 222631 222950 . - 0 ID=Thaps17396;Parent=Thaps17396;rank=1 chr13 . exon 222631 222950 . - . ID=Thaps17396.1;Parent=Thaps17396;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 228113 228298 . - . ID=Thaps19890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB41];external_name=Thaps19890;logic_name=jgi_thaps3 chr13 ensembl transcript 228113 228298 . - . ID=Thaps19890;Parent=Thaps19890;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 228113 228298 . - 0 ID=Thaps19890;Parent=Thaps19890;rank=1 chr13 . exon 228113 228298 . - . ID=Thaps19890.1;Parent=Thaps19890;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 218488 221641 . + . ID=Thaps269663;biotype=protein_coding;description=Coatomer subunit gamma [Source:UniProtKB/TrEMBL%3BAcc:B8CB37];external_name=COP4;logic_name=jgi_thaps3 chr13 ensembl transcript 218488 221641 . + . ID=Thaps269663;Parent=Thaps269663;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 218488 219162 . + 0 ID=Thaps269663;Parent=Thaps269663;rank=1 chr13 . exon 218488 219162 . + . ID=Thaps269663.1;Parent=Thaps269663;constitutive=1;rank=1 chr13 . CDS 219422 219574 . + 0 ID=Thaps269663;Parent=Thaps269663;rank=2 chr13 . exon 219422 219574 . + . ID=Thaps269663.2;Parent=Thaps269663;constitutive=1;rank=2 chr13 . CDS 219614 220509 . + 0 ID=Thaps269663;Parent=Thaps269663;rank=3 chr13 . exon 219614 220509 . + . ID=Thaps269663.3;Parent=Thaps269663;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 220560 220564 . + 0 ID=Thaps269663;Parent=Thaps269663;rank=4 chr13 . exon 220560 220564 . + . ID=Thaps269663.4;Parent=Thaps269663;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 220596 220771 . + 0 ID=Thaps269663;Parent=Thaps269663;rank=5 chr13 . exon 220596 220771 . + . ID=Thaps269663.5;Parent=Thaps269663;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 220820 221641 . + 0 ID=Thaps269663;Parent=Thaps269663;rank=6 chr13 . exon 220820 221641 . + . ID=Thaps269663.6;Parent=Thaps269663;constitutive=1;rank=6 chr13 ensembl protein_coding_gene 223537 225318 . + . ID=Thaps9360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB39];external_name=Thaps9360;logic_name=jgi_thaps3 chr13 ensembl transcript 223537 225318 . + . ID=Thaps9360;Parent=Thaps9360;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 223537 223653 . + 0 ID=Thaps9360;Parent=Thaps9360;rank=1 chr13 . exon 223537 223653 . + . ID=Thaps9360.1;Parent=Thaps9360;constitutive=1;rank=1 chr13 . CDS 223802 223918 . + 0 ID=Thaps9360;Parent=Thaps9360;rank=2 chr13 . exon 223802 223918 . + . ID=Thaps9360.2;Parent=Thaps9360;constitutive=1;rank=2 chr13 . CDS 224010 224102 . + 0 ID=Thaps9360;Parent=Thaps9360;rank=3 chr13 . exon 224010 224102 . + . ID=Thaps9360.3;Parent=Thaps9360;constitutive=1;rank=3 chr13 . CDS 224197 225318 . + 0 ID=Thaps9360;Parent=Thaps9360;rank=4 chr13 . exon 224197 225318 . + . ID=Thaps9360.4;Parent=Thaps9360;constitutive=1;rank=4 chr13 ensembl protein_coding_gene 225848 226495 . + . ID=Thaps9361;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB40];external_name=Thaps9361;logic_name=jgi_thaps3 chr13 ensembl transcript 225848 226495 . + . ID=Thaps9361;Parent=Thaps9361;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 225848 225923 . + 0 ID=Thaps9361;Parent=Thaps9361;rank=1 chr13 . exon 225848 225923 . + . ID=Thaps9361.1;Parent=Thaps9361;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 225999 226495 . + 0 ID=Thaps9361;Parent=Thaps9361;rank=2 chr13 . exon 225999 226495 . + . ID=Thaps9361.2;Parent=Thaps9361;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 229145 232935 . + . ID=Thaps24613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB42];external_name=Thaps24613;logic_name=jgi_thaps3 chr13 ensembl transcript 229145 232935 . + . ID=Thaps24613;Parent=Thaps24613;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 229145 229205 . + 0 ID=Thaps24613;Parent=Thaps24613;rank=1 chr13 . exon 229145 229205 . + . ID=Thaps24613.1;Parent=Thaps24613;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 229382 232935 . + 0 ID=Thaps24613;Parent=Thaps24613;rank=2 chr13 . exon 229382 232935 . + . ID=Thaps24613.2;Parent=Thaps24613;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 237529 239685 . + . ID=Thaps24614;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB44];external_name=Thaps24614;logic_name=jgi_thaps3 chr13 ensembl transcript 237529 239685 . + . ID=Thaps24614;Parent=Thaps24614;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 237529 239685 . + 0 ID=Thaps24614;Parent=Thaps24614;rank=1 chr13 . exon 237529 239685 . + . ID=Thaps24614.1;Parent=Thaps24614;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 233011 236512 . - . ID=Thaps9364;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB43];external_name=Thaps9364;logic_name=jgi_thaps3 chr13 ensembl transcript 233011 236512 . - . ID=Thaps9364;Parent=Thaps9364;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 233011 233034 . - 0 ID=Thaps9364;Parent=Thaps9364;rank=2 chr13 . exon 233011 233034 . - . ID=Thaps9364.2;Parent=Thaps9364;constitutive=1;rank=2 chr13 . CDS 233057 236512 . - 0 ID=Thaps9364;Parent=Thaps9364;rank=1 chr13 . exon 233057 236512 . - . ID=Thaps9364.1;Parent=Thaps9364;constitutive=1;rank=1 chr13 . repeat_region 245868 245875 . ? . description=dust chr13 ensembl protein_coding_gene 240545 241502 . + . ID=Thaps17337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB45];external_name=Thaps17337;logic_name=jgi_thaps3 chr13 ensembl transcript 240545 241502 . + . ID=Thaps17337;Parent=Thaps17337;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 240545 240864 . + 0 ID=Thaps17337;Parent=Thaps17337;rank=1 chr13 . exon 240545 240864 . + . ID=Thaps17337.1;Parent=Thaps17337;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 240955 241114 . + 0 ID=Thaps17337;Parent=Thaps17337;rank=2 chr13 . exon 240955 241114 . + . ID=Thaps17337.2;Parent=Thaps17337;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 241208 241285 . + 0 ID=Thaps17337;Parent=Thaps17337;rank=3 chr13 . exon 241208 241285 . + . ID=Thaps17337.3;Parent=Thaps17337;constitutive=1;rank=3 chr13 . CDS 241389 241502 . + 0 ID=Thaps17337;Parent=Thaps17337;rank=4 chr13 . exon 241389 241502 . + . ID=Thaps17337.4;Parent=Thaps17337;constitutive=1;rank=4 chr13 ensembl protein_coding_gene 247813 248726 . + . ID=Thaps263984;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB47];external_name=Thaps263984;logic_name=jgi_thaps3 chr13 ensembl transcript 247813 248726 . + . ID=Thaps263984;Parent=Thaps263984;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 247813 248202 . + 0 ID=Thaps263984;Parent=Thaps263984;rank=1 chr13 . exon 247813 248202 . + . ID=Thaps263984.1;Parent=Thaps263984;constitutive=1;rank=1 chr13 . CDS 248289 248726 . + 0 ID=Thaps263984;Parent=Thaps263984;rank=2 chr13 ensembl protein_coding_gene 241829 245964 . - . ID=Thaps9367;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB46];external_name=Thaps9367;logic_name=jgi_thaps3 chr13 ensembl transcript 241829 245964 . - . ID=Thaps9367;Parent=Thaps9367;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 241829 243139 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=10 chr13 . exon 241829 243139 . - . ID=Thaps9367.10;Parent=Thaps9367;constitutive=1;rank=10 chr13 . CDS 243222 243269 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=9 chr13 . exon 243222 243269 . - . ID=Thaps9367.9;Parent=Thaps9367;constitutive=1;rank=9 chr13 . CDS 243354 243677 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=8 chr13 . exon 243354 243677 . - . ID=Thaps9367.8;Parent=Thaps9367;constitutive=1;rank=8 chr13 . CDS 243783 243917 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=7 chr13 . exon 243783 243917 . - . ID=Thaps9367.7;Parent=Thaps9367;constitutive=1;rank=7 chr13 . CDS 243991 244056 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=6 chr13 . exon 243991 244056 . - . ID=Thaps9367.6;Parent=Thaps9367;constitutive=1;rank=6 chr13 . CDS 244129 244671 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=5 chr13 . exon 244129 244671 . - . ID=Thaps9367.5;Parent=Thaps9367;constitutive=1;rank=5 chr13 . CDS 244763 245493 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=4 chr13 . exon 244763 245493 . - . ID=Thaps9367.4;Parent=Thaps9367;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 245588 245734 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=3 chr13 . exon 245588 245734 . - . ID=Thaps9367.3;Parent=Thaps9367;constitutive=1;rank=3 chr13 . CDS 245791 245864 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=2 chr13 . exon 245791 245864 . - . ID=Thaps9367.2;Parent=Thaps9367;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 245945 245964 . - 0 ID=Thaps9367;Parent=Thaps9367;rank=1 chr13 . exon 245945 245964 . - . ID=Thaps9367.1;Parent=Thaps9367;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . repeat_region 252545 252565 . ? . description=trf chr13 ensembl protein_coding_gene 249042 249593 . - . ID=Thaps24615;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB48];external_name=Thaps24615;logic_name=jgi_thaps3 chr13 ensembl transcript 249042 249593 . - . ID=Thaps24615;Parent=Thaps24615;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 249042 249593 . - 0 ID=Thaps24615;Parent=Thaps24615;rank=1 chr13 . exon 249042 249593 . - . ID=Thaps24615.1;Parent=Thaps24615;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 253138 256188 . - . ID=Thaps24616;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB51];external_name=Thaps24616;logic_name=jgi_thaps3 chr13 ensembl transcript 253138 256188 . - . ID=Thaps24616;Parent=Thaps24616;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 253138 253832 . - 0 ID=Thaps24616;Parent=Thaps24616;rank=3 chr13 . exon 253138 253832 . - . ID=Thaps24616.3;Parent=Thaps24616;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 253939 255963 . - 0 ID=Thaps24616;Parent=Thaps24616;rank=2 chr13 . exon 253939 255963 . - . ID=Thaps24616.2;Parent=Thaps24616;constitutive=1;rank=2 chr13 . CDS 256077 256188 . - 0 ID=Thaps24616;Parent=Thaps24616;rank=1 chr13 . exon 256077 256188 . - . ID=Thaps24616.1;Parent=Thaps24616;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . exon 248289 248726 . + . ID=Thaps263984.2;Parent=Thaps263984;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 250950 251774 . - . ID=Thaps9370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB49];external_name=Thaps9370;logic_name=jgi_thaps3 chr13 ensembl transcript 250950 251774 . - . ID=Thaps9370;Parent=Thaps9370;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 250950 251774 . - 0 ID=Thaps9370;Parent=Thaps9370;rank=1 chr13 . exon 250950 251774 . - . ID=Thaps9370.1;Parent=Thaps9370;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 252088 252804 . + . ID=Thaps9371;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB50];external_name=Thaps9371;logic_name=jgi_thaps3 chr13 ensembl transcript 252088 252804 . + . ID=Thaps9371;Parent=Thaps9371;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 252088 252804 . + 0 ID=Thaps9371;Parent=Thaps9371;rank=1 chr13 . exon 252088 252804 . + . ID=Thaps9371.1;Parent=Thaps9371;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 256672 258333 . - . ID=Thaps9373;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB52];external_name=Thaps9373;logic_name=jgi_thaps3 chr13 ensembl transcript 256672 258333 . - . ID=Thaps9373;Parent=Thaps9373;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 256672 258333 . - 0 ID=Thaps9373;Parent=Thaps9373;rank=1 chr13 . exon 256672 258333 . - . ID=Thaps9373.1;Parent=Thaps9373;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 262227 264636 . - . ID=Thaps24617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB55];external_name=Thaps24617;logic_name=jgi_thaps3 chr13 ensembl transcript 262227 264636 . - . ID=Thaps24617;Parent=Thaps24617;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 262227 262409 . - 0 ID=Thaps24617;Parent=Thaps24617;rank=2 chr13 . exon 262227 262409 . - . ID=Thaps24617.2;Parent=Thaps24617;constitutive=1;rank=2 chr13 . CDS 262501 264636 . - 0 ID=Thaps24617;Parent=Thaps24617;rank=1 chr13 . exon 262501 264636 . - . ID=Thaps24617.1;Parent=Thaps24617;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 265368 271847 . + . ID=Thaps24618;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB56];external_name=Thaps24618;logic_name=jgi_thaps3 chr13 ensembl transcript 265368 271847 . + . ID=Thaps24618;Parent=Thaps24618;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 265368 265811 . + 0 ID=Thaps24618;Parent=Thaps24618;rank=1 chr13 . exon 265368 265811 . + . ID=Thaps24618.1;Parent=Thaps24618;constitutive=1;rank=1 chr13 . CDS 266237 269101 . + 0 ID=Thaps24618;Parent=Thaps24618;rank=2 chr13 . exon 266237 269101 . + . ID=Thaps24618.2;Parent=Thaps24618;constitutive=1;rank=2 chr13 . CDS 269183 269759 . + 0 ID=Thaps24618;Parent=Thaps24618;rank=3 chr13 . CDS 269839 271847 . + 0 ID=Thaps24618;Parent=Thaps24618;rank=4 chr13 ensembl protein_coding_gene 258672 260546 . + . ID=Thaps9374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB53];external_name=Thaps9374;logic_name=jgi_thaps3 chr13 ensembl transcript 258672 260546 . + . ID=Thaps9374;Parent=Thaps9374;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 258672 260546 . + 0 ID=Thaps9374;Parent=Thaps9374;rank=1 chr13 . exon 258672 260546 . + . ID=Thaps9374.1;Parent=Thaps9374;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 260711 261766 . - . ID=Thaps9375;biotype=protein_coding;description=Putative uncharacterized protein HSF16 [Source:UniProtKB/TrEMBL%3BAcc:B8CB54];external_name=HSF16;logic_name=jgi_thaps3 chr13 ensembl transcript 260711 261766 . - . ID=Thaps9375;Parent=Thaps9375;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 260711 261452 . - 0 ID=Thaps9375;Parent=Thaps9375;rank=2 chr13 . exon 260711 261452 . - . ID=Thaps9375.2;Parent=Thaps9375;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 261552 261766 . - 0 ID=Thaps9375;Parent=Thaps9375;rank=1 chr13 . exon 261552 261766 . - . ID=Thaps9375.1;Parent=Thaps9375;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . exon 269183 269759 . + . ID=Thaps24618.3;Parent=Thaps24618;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . exon 269839 271847 . + . ID=Thaps24618.4;Parent=Thaps24618;constitutive=1;ensembl_end_phase=2;rank=4 chr13 ensembl protein_coding_gene 271865 277375 . - . ID=Thaps9378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB57];external_name=Thaps9378;logic_name=jgi_thaps3 chr13 ensembl transcript 271865 277375 . - . ID=Thaps9378;Parent=Thaps9378;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 271865 274713 . - 0 ID=Thaps9378;Parent=Thaps9378;rank=3 chr13 . exon 271865 274713 . - . ID=Thaps9378.3;Parent=Thaps9378;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 275128 275866 . - 0 ID=Thaps9378;Parent=Thaps9378;rank=2 chr13 . exon 275128 275866 . - . ID=Thaps9378.2;Parent=Thaps9378;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 275966 277375 . - 0 ID=Thaps9378;Parent=Thaps9378;rank=1 chr13 . exon 275966 277375 . - . ID=Thaps9378.1;Parent=Thaps9378;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 278525 279274 . - . ID=Thaps24619;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB58];external_name=Thaps24619;logic_name=jgi_thaps3 chr13 ensembl transcript 278525 279274 . - . ID=Thaps24619;Parent=Thaps24619;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 278525 279274 . - 0 ID=Thaps24619;Parent=Thaps24619;rank=1 chr13 . exon 278525 279274 . - . ID=Thaps24619.1;Parent=Thaps24619;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 287792 288052 . - . ID=Thaps263987;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB63];external_name=Thaps263987;logic_name=jgi_thaps3 chr13 ensembl transcript 287792 288052 . - . ID=Thaps263987;Parent=Thaps263987;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 287792 288052 . - 0 ID=Thaps263987;Parent=Thaps263987;rank=1 chr13 . exon 287792 288052 . - . ID=Thaps263987.1;Parent=Thaps263987;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 280166 282314 . + . ID=Thaps37187;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB59];external_name=Thaps37187;logic_name=jgi_thaps3 chr13 ensembl transcript 280166 282314 . + . ID=Thaps37187;Parent=Thaps37187;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 280166 281398 . + 0 ID=Thaps37187;Parent=Thaps37187;rank=1 chr13 . exon 280166 281398 . + . ID=Thaps37187.1;Parent=Thaps37187;constitutive=1;rank=1 chr13 . CDS 281493 281596 . + 0 ID=Thaps37187;Parent=Thaps37187;rank=2 chr13 . exon 281493 281596 . + . ID=Thaps37187.2;Parent=Thaps37187;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 281642 282314 . + 0 ID=Thaps37187;Parent=Thaps37187;rank=3 chr13 . exon 281642 282314 . + . ID=Thaps37187.3;Parent=Thaps37187;constitutive=1;ensembl_end_phase=1;rank=3 chr13 ensembl protein_coding_gene 286348 286794 . - . ID=Thaps42194;biotype=protein_coding;description=EF hand-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB62];external_name=Thaps42194;logic_name=jgi_thaps3 chr13 ensembl transcript 286348 286794 . - . ID=Thaps42194;Parent=Thaps42194;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 286348 286794 . - 0 ID=Thaps42194;Parent=Thaps42194;rank=1 chr13 . exon 286348 286794 . - . ID=Thaps42194.1;Parent=Thaps42194;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 282432 283535 . - . ID=Thaps9381;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB60];external_name=Thaps9381;logic_name=jgi_thaps3 chr13 ensembl transcript 282432 283535 . - . ID=Thaps9381;Parent=Thaps9381;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 282432 283535 . - 0 ID=Thaps9381;Parent=Thaps9381;rank=1 chr13 . exon 282432 283535 . - . ID=Thaps9381.1;Parent=Thaps9381;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 284604 286133 . + . ID=Thaps9382;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB61];external_name=Thaps9382;logic_name=jgi_thaps3 chr13 ensembl transcript 284604 286133 . + . ID=Thaps9382;Parent=Thaps9382;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 284604 286133 . + 0 ID=Thaps9382;Parent=Thaps9382;rank=1 chr13 . exon 284604 286133 . + . ID=Thaps9382.1;Parent=Thaps9382;constitutive=1;rank=1 chr13 . repeat_region 293497 293504 . ? . description=dust chr13 . repeat_region 297703 297732 . ? . description=trf chr13 ensembl protein_coding_gene 290850 293198 . + . ID=Thaps24623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB66];external_name=Thaps24623;logic_name=jgi_thaps3 chr13 ensembl transcript 290850 293198 . + . ID=Thaps24623;Parent=Thaps24623;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 290850 293198 . + 0 ID=Thaps24623;Parent=Thaps24623;rank=1 chr13 . exon 290850 293198 . + . ID=Thaps24623.1;Parent=Thaps24623;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 293584 295998 . + . ID=Thaps24624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB67];external_name=Thaps24624;logic_name=jgi_thaps3 chr13 ensembl transcript 293584 295998 . + . ID=Thaps24624;Parent=Thaps24624;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 293584 295998 . + 0 ID=Thaps24624;Parent=Thaps24624;rank=1 chr13 . exon 293584 295998 . + . ID=Thaps24624.1;Parent=Thaps24624;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 289480 290232 . - . ID=Thaps37183;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB65];external_name=Thaps37183;logic_name=jgi_thaps3 chr13 ensembl transcript 289480 290232 . - . ID=Thaps37183;Parent=Thaps37183;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 289480 289731 . - 0 ID=Thaps37183;Parent=Thaps37183;rank=3 chr13 . exon 289480 289731 . - . ID=Thaps37183.3;Parent=Thaps37183;constitutive=1;rank=3 chr13 . CDS 289891 289929 . - 0 ID=Thaps37183;Parent=Thaps37183;rank=2 chr13 . exon 289891 289929 . - . ID=Thaps37183.2;Parent=Thaps37183;constitutive=1;rank=2 chr13 . CDS 290092 290232 . - 0 ID=Thaps37183;Parent=Thaps37183;rank=1 chr13 . exon 290092 290232 . - . ID=Thaps37183.1;Parent=Thaps37183;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 288244 288642 . + . ID=Thaps9384;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB64];external_name=Thaps9384;logic_name=jgi_thaps3 chr13 ensembl transcript 288244 288642 . + . ID=Thaps9384;Parent=Thaps9384;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 288244 288642 . + 0 ID=Thaps9384;Parent=Thaps9384;rank=1 chr13 . exon 288244 288642 . + . ID=Thaps9384.1;Parent=Thaps9384;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 296126 298322 . - . ID=Thaps9388;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB68];external_name=Thaps9388;logic_name=jgi_thaps3 chr13 ensembl transcript 296126 298322 . - . ID=Thaps9388;Parent=Thaps9388;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 296126 297730 . - 0 ID=Thaps9388;Parent=Thaps9388;rank=3 chr13 . exon 296126 297730 . - . ID=Thaps9388.3;Parent=Thaps9388;constitutive=1;rank=3 chr13 . CDS 297824 298116 . - 0 ID=Thaps9388;Parent=Thaps9388;rank=2 chr13 . CDS 298202 298322 . - 0 ID=Thaps9388;Parent=Thaps9388;rank=1 chr13 ensembl protein_coding_gene 300033 300653 . + . ID=Thaps17961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB69];external_name=Thaps17961;logic_name=jgi_thaps3 chr13 ensembl transcript 300033 300653 . + . ID=Thaps17961;Parent=Thaps17961;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 300033 300653 . + 0 ID=Thaps17961;Parent=Thaps17961;rank=1 chr13 . exon 300033 300653 . + . ID=Thaps17961.1;Parent=Thaps17961;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 306942 308630 . + . ID=Thaps24626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB72];external_name=Thaps24626;logic_name=jgi_thaps3 chr13 ensembl transcript 306942 308630 . + . ID=Thaps24626;Parent=Thaps24626;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 306942 308630 . + 0 ID=Thaps24626;Parent=Thaps24626;rank=1 chr13 . exon 306942 308630 . + . ID=Thaps24626.1;Parent=Thaps24626;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 300747 303379 . - . ID=Thaps29818;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB70];external_name=Thaps29818;logic_name=jgi_thaps3 chr13 ensembl transcript 300747 303379 . - . ID=Thaps29818;Parent=Thaps29818;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 300747 300859 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=11 chr13 . exon 300747 300859 . - . ID=Thaps29818.11;Parent=Thaps29818;constitutive=1;ensembl_end_phase=2;rank=11 chr13 . CDS 300948 301075 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=10 chr13 . exon 300948 301075 . - . ID=Thaps29818.10;Parent=Thaps29818;constitutive=1;ensembl_end_phase=2;rank=10 chr13 . CDS 301159 301525 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=9 chr13 . exon 301159 301525 . - . ID=Thaps29818.9;Parent=Thaps29818;constitutive=1;ensembl_end_phase=1;rank=9 chr13 . CDS 301597 301645 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=8 chr13 . exon 301597 301645 . - . ID=Thaps29818.8;Parent=Thaps29818;constitutive=1;ensembl_end_phase=1;rank=8 chr13 . CDS 301673 301782 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=7 chr13 . exon 301673 301782 . - . ID=Thaps29818.7;Parent=Thaps29818;constitutive=1;ensembl_end_phase=2;rank=7 chr13 . CDS 301870 301972 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=6 chr13 . exon 301870 301972 . - . ID=Thaps29818.6;Parent=Thaps29818;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . CDS 302070 302174 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=5 chr13 . exon 302070 302174 . - . ID=Thaps29818.5;Parent=Thaps29818;constitutive=1;rank=5 chr13 . CDS 302255 302361 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=4 chr13 . exon 302255 302361 . - . ID=Thaps29818.4;Parent=Thaps29818;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 302441 302463 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=3 chr13 . exon 302441 302463 . - . ID=Thaps29818.3;Parent=Thaps29818;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 302550 302795 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=2 chr13 . exon 302550 302795 . - . ID=Thaps29818.2;Parent=Thaps29818;constitutive=1;rank=2 chr13 . CDS 302886 303379 . - 0 ID=Thaps29818;Parent=Thaps29818;rank=1 chr13 . exon 302886 303379 . - . ID=Thaps29818.1;Parent=Thaps29818;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . exon 297824 298116 . - . ID=Thaps9388.2;Parent=Thaps9388;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . exon 298202 298322 . - . ID=Thaps9388.1;Parent=Thaps9388;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 305077 306438 . + . ID=Thaps9391;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB71];external_name=Thaps9391;logic_name=jgi_thaps3 chr13 ensembl transcript 305077 306438 . + . ID=Thaps9391;Parent=Thaps9391;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 305077 306438 . + 0 ID=Thaps9391;Parent=Thaps9391;rank=1 chr13 . exon 305077 306438 . + . ID=Thaps9391.1;Parent=Thaps9391;constitutive=1;rank=1 chr13 . repeat_region 310593 310641 . ? . description=trf chr13 . repeat_region 314197 314282 . ? . description=trf chr13 . repeat_region 315164 315178 . ? . description=dust chr13 . repeat_region 317220 317255 . ? . description=trf chr13 ensembl protein_coding_gene 309853 312060 . + . ID=Thaps9393;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB73];external_name=Thaps9393;logic_name=jgi_thaps3 chr13 ensembl transcript 309853 312060 . + . ID=Thaps9393;Parent=Thaps9393;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 309853 310332 . + 0 ID=Thaps9393;Parent=Thaps9393;rank=1 chr13 . exon 309853 310332 . + . ID=Thaps9393.1;Parent=Thaps9393;constitutive=1;rank=1 chr13 . CDS 310419 311369 . + 0 ID=Thaps9393;Parent=Thaps9393;rank=2 chr13 . exon 310419 311369 . + . ID=Thaps9393.2;Parent=Thaps9393;constitutive=1;rank=2 chr13 . CDS 311446 312060 . + 0 ID=Thaps9393;Parent=Thaps9393;rank=3 chr13 . exon 311446 312060 . + . ID=Thaps9393.3;Parent=Thaps9393;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 313961 317595 . - . ID=Thaps9394;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB74];external_name=Thaps9394;logic_name=jgi_thaps3 chr13 ensembl transcript 313961 317595 . - . ID=Thaps9394;Parent=Thaps9394;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 313961 314100 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=15 chr13 . exon 313961 314100 . - . ID=Thaps9394.15;Parent=Thaps9394;constitutive=1;ensembl_end_phase=2;rank=15 chr13 . CDS 314183 314282 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=14 chr13 . exon 314183 314282 . - . ID=Thaps9394.14;Parent=Thaps9394;constitutive=1;ensembl_end_phase=1;rank=14 chr13 . CDS 314374 314415 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=13 chr13 . exon 314374 314415 . - . ID=Thaps9394.13;Parent=Thaps9394;constitutive=1;rank=13 chr13 . CDS 314494 314526 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=12 chr13 . exon 314494 314526 . - . ID=Thaps9394.12;Parent=Thaps9394;constitutive=1;rank=12 chr13 . CDS 314607 314689 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=11 chr13 . exon 314607 314689 . - . ID=Thaps9394.11;Parent=Thaps9394;constitutive=1;ensembl_end_phase=2;rank=11 chr13 . CDS 314785 314817 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=10 chr13 . exon 314785 314817 . - . ID=Thaps9394.10;Parent=Thaps9394;constitutive=1;rank=10 chr13 . CDS 314897 314950 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=9 chr13 . exon 314897 314950 . - . ID=Thaps9394.9;Parent=Thaps9394;constitutive=1;rank=9 chr13 . CDS 315038 315124 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=8 chr13 . exon 315038 315124 . - . ID=Thaps9394.8;Parent=Thaps9394;constitutive=1;rank=8 chr13 . CDS 315224 315288 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=7 chr13 . exon 315224 315288 . - . ID=Thaps9394.7;Parent=Thaps9394;constitutive=1;ensembl_end_phase=2;rank=7 chr13 . CDS 315327 315381 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=6 chr13 . exon 315327 315381 . - . ID=Thaps9394.6;Parent=Thaps9394;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . CDS 315491 315616 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=5 chr13 . exon 315491 315616 . - . ID=Thaps9394.5;Parent=Thaps9394;constitutive=1;rank=5 chr13 . CDS 315706 315753 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=4 chr13 . exon 315706 315753 . - . ID=Thaps9394.4;Parent=Thaps9394;constitutive=1;rank=4 chr13 . CDS 315971 316246 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=3 chr13 . exon 315971 316246 . - . ID=Thaps9394.3;Parent=Thaps9394;constitutive=1;rank=3 chr13 . CDS 316356 316539 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=2 chr13 . exon 316356 316539 . - . ID=Thaps9394.2;Parent=Thaps9394;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 316930 317595 . - 0 ID=Thaps9394;Parent=Thaps9394;rank=1 chr13 . exon 316930 317595 . - . ID=Thaps9394.1;Parent=Thaps9394;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 318158 320879 . + . ID=Thaps24627;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB75];external_name=Thaps24627;logic_name=jgi_thaps3 chr13 ensembl transcript 318158 320879 . + . ID=Thaps24627;Parent=Thaps24627;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 318158 318891 . + 0 ID=Thaps24627;Parent=Thaps24627;rank=1 chr13 . exon 318158 318891 . + . ID=Thaps24627.1;Parent=Thaps24627;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 319007 320879 . + 0 ID=Thaps24627;Parent=Thaps24627;rank=2 chr13 . exon 319007 320879 . + . ID=Thaps24627.2;Parent=Thaps24627;constitutive=1;ensembl_end_phase=1;rank=2 chr13 ensembl protein_coding_gene 322630 324909 . - . ID=Thaps24628;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB77];external_name=Thaps24628;logic_name=jgi_thaps3 chr13 ensembl transcript 322630 324909 . - . ID=Thaps24628;Parent=Thaps24628;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 322630 322780 . - 0 ID=Thaps24628;Parent=Thaps24628;rank=7 chr13 . exon 322630 322780 . - . ID=Thaps24628.7;Parent=Thaps24628;constitutive=1;ensembl_end_phase=1;rank=7 chr13 . CDS 322864 323494 . - 0 ID=Thaps24628;Parent=Thaps24628;rank=6 chr13 . exon 322864 323494 . - . ID=Thaps24628.6;Parent=Thaps24628;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . CDS 323570 323666 . - 0 ID=Thaps24628;Parent=Thaps24628;rank=5 chr13 . exon 323570 323666 . - . ID=Thaps24628.5;Parent=Thaps24628;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . CDS 323775 324260 . - 0 ID=Thaps24628;Parent=Thaps24628;rank=4 chr13 . exon 323775 324260 . - . ID=Thaps24628.4;Parent=Thaps24628;constitutive=1;rank=4 chr13 . CDS 324353 324413 . - 0 ID=Thaps24628;Parent=Thaps24628;rank=3 chr13 . exon 324353 324413 . - . ID=Thaps24628.3;Parent=Thaps24628;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 324557 324609 . - 0 ID=Thaps24628;Parent=Thaps24628;rank=2 chr13 . exon 324557 324609 . - . ID=Thaps24628.2;Parent=Thaps24628;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 324718 324909 . - 0 ID=Thaps24628;Parent=Thaps24628;rank=1 chr13 . exon 324718 324909 . - . ID=Thaps24628.1;Parent=Thaps24628;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 321475 322215 . - . ID=Thaps9396;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB76];external_name=Thaps9396;logic_name=jgi_thaps3 chr13 ensembl transcript 321475 322215 . - . ID=Thaps9396;Parent=Thaps9396;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 321475 322215 . - 0 ID=Thaps9396;Parent=Thaps9396;rank=1 chr13 . exon 321475 322215 . - . ID=Thaps9396.1;Parent=Thaps9396;constitutive=1;rank=1 chr13 . repeat_region 330583 330623 . ? . description=trf chr13 . repeat_region 333120 333148 . ? . description=trf chr13 . repeat_region 333120 333148 . ? . description=trf chr13 . repeat_region 333120 333148 . ? . description=dust chr13 ensembl tRNA_gene 335809 335920 . - . ID=EPrTPOG00000000009;biotype=tRNA;description=tRNA-His for anticodon GUG [Source:TRNASCAN_SE%3BAcc:tRNA-His];external_name=tRNA-His;logic_name=ncrna_eg chr13 ensembl transcript 335809 335920 . - . ID=EPrTPOT00000000008;Parent=EPrTPOG00000000009;biotype=tRNA;logic_name=ncrna_eg chr13 . exon 335809 335920 . - . ID=EPrTPOE00000000009;Parent=EPrTPOT00000000008;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 334516 335218 . - . ID=Thaps24631;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB81];external_name=Thaps24631;logic_name=jgi_thaps3 chr13 ensembl transcript 334516 335218 . - . ID=Thaps24631;Parent=Thaps24631;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 334516 334897 . - 0 ID=Thaps24631;Parent=Thaps24631;rank=2 chr13 . exon 334516 334897 . - . ID=Thaps24631.2;Parent=Thaps24631;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 335010 335218 . - 0 ID=Thaps24631;Parent=Thaps24631;rank=1 chr13 . exon 335010 335218 . - . ID=Thaps24631.1;Parent=Thaps24631;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 327671 328095 . + . ID=Thaps263989;biotype=protein_coding;description=Putative uncharacterized protein HSF13 [Source:UniProtKB/TrEMBL%3BAcc:B8CB78];external_name=HSF13;logic_name=jgi_thaps3 chr13 ensembl transcript 327671 328095 . + . ID=Thaps263989;Parent=Thaps263989;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 327671 328095 . + 0 ID=Thaps263989;Parent=Thaps263989;rank=1 chr13 . exon 327671 328095 . + . ID=Thaps263989.1;Parent=Thaps263989;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 330024 330275 . + . ID=Thaps269666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB79];external_name=Thaps269666;logic_name=jgi_thaps3 chr13 ensembl transcript 330024 330275 . + . ID=Thaps269666;Parent=Thaps269666;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 330024 330166 . + 0 ID=Thaps269666;Parent=Thaps269666;rank=1 chr13 . exon 330024 330166 . + . ID=Thaps269666.1;Parent=Thaps269666;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 330215 330275 . + 0 ID=Thaps269666;Parent=Thaps269666;rank=2 chr13 . exon 330215 330275 . + . ID=Thaps269666.2;Parent=Thaps269666;constitutive=1;ensembl_end_phase=1;rank=2 chr13 ensembl protein_coding_gene 331703 332908 . - . ID=Thaps37156;biotype=protein_coding;description=Ribose-phosphat pyrophosphokinase [Source:UniProtKB/TrEMBL%3BAcc:B8CB80];external_name=Thaps37156;logic_name=jgi_thaps3 chr13 ensembl transcript 331703 332908 . - . ID=Thaps37156;Parent=Thaps37156;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 331703 332023 . - 0 ID=Thaps37156;Parent=Thaps37156;rank=3 chr13 . exon 331703 332023 . - . ID=Thaps37156.3;Parent=Thaps37156;constitutive=1;rank=3 chr13 . CDS 332104 332292 . - 0 ID=Thaps37156;Parent=Thaps37156;rank=2 chr13 . exon 332104 332292 . - . ID=Thaps37156.2;Parent=Thaps37156;constitutive=1;rank=2 chr13 . CDS 332438 332908 . - 0 ID=Thaps37156;Parent=Thaps37156;rank=1 chr13 . exon 332438 332908 . - . ID=Thaps37156.1;Parent=Thaps37156;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 336389 339077 . - . ID=Thaps9401;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB82];external_name=Thaps9401;logic_name=jgi_thaps3 chr13 ensembl transcript 336389 339077 . - . ID=Thaps9401;Parent=Thaps9401;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 336389 338284 . - 0 ID=Thaps9401;Parent=Thaps9401;rank=3 chr13 . exon 336389 338284 . - . ID=Thaps9401.3;Parent=Thaps9401;constitutive=1;rank=3 chr13 . CDS 338360 338365 . - 0 ID=Thaps9401;Parent=Thaps9401;rank=2 chr13 . CDS 338415 339077 . - 0 ID=Thaps9401;Parent=Thaps9401;rank=1 chr13 ensembl protein_coding_gene 340455 344356 . + . ID=Thaps24632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB83];external_name=Thaps24632;logic_name=jgi_thaps3 chr13 ensembl transcript 340455 344356 . + . ID=Thaps24632;Parent=Thaps24632;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 340455 340549 . + 0 ID=Thaps24632;Parent=Thaps24632;rank=1 chr13 . exon 340455 340549 . + . ID=Thaps24632.1;Parent=Thaps24632;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 340830 340899 . + 0 ID=Thaps24632;Parent=Thaps24632;rank=2 chr13 . exon 340830 340899 . + . ID=Thaps24632.2;Parent=Thaps24632;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 340993 341107 . + 0 ID=Thaps24632;Parent=Thaps24632;rank=3 chr13 . exon 340993 341107 . + . ID=Thaps24632.3;Parent=Thaps24632;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 341191 341494 . + 0 ID=Thaps24632;Parent=Thaps24632;rank=4 chr13 . exon 341191 341494 . + . ID=Thaps24632.4;Parent=Thaps24632;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 341587 341615 . + 0 ID=Thaps24632;Parent=Thaps24632;rank=5 chr13 . exon 341587 341615 . + . ID=Thaps24632.5;Parent=Thaps24632;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 341722 342545 . + 0 ID=Thaps24632;Parent=Thaps24632;rank=6 chr13 . exon 341722 342545 . + . ID=Thaps24632.6;Parent=Thaps24632;constitutive=1;ensembl_end_phase=2;rank=6 chr13 . CDS 342599 344356 . + 0 ID=Thaps24632;Parent=Thaps24632;rank=7 chr13 . exon 342599 344356 . + . ID=Thaps24632.7;Parent=Thaps24632;constitutive=1;rank=7 chr13 ensembl protein_coding_gene 344627 347137 . - . ID=Thaps24633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB84];external_name=Thaps24633;logic_name=jgi_thaps3 chr13 ensembl transcript 344627 347137 . - . ID=Thaps24633;Parent=Thaps24633;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 344627 347137 . - 0 ID=Thaps24633;Parent=Thaps24633;rank=1 chr13 . exon 344627 347137 . - . ID=Thaps24633.1;Parent=Thaps24633;constitutive=1;rank=1 chr13 . exon 338360 338365 . - . ID=Thaps9401.2;Parent=Thaps9401;constitutive=1;rank=2 chr13 . exon 338415 339077 . - . ID=Thaps9401.1;Parent=Thaps9401;constitutive=1;rank=1 chr13 . repeat_region 347900 347909 . ? . description=dust chr13 . repeat_region 352465 352518 . ? . description=trf chr13 . repeat_region 354722 354784 . ? . description=trf chr13 ensembl protein_coding_gene 353319 355199 . + . ID=Thaps24634;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB88];external_name=Thaps24634;logic_name=jgi_thaps3 chr13 ensembl transcript 353319 355199 . + . ID=Thaps24634;Parent=Thaps24634;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 353319 354144 . + 0 ID=Thaps24634;Parent=Thaps24634;rank=1 chr13 . exon 353319 354144 . + . ID=Thaps24634.1;Parent=Thaps24634;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 354268 355199 . + 0 ID=Thaps24634;Parent=Thaps24634;rank=2 chr13 . exon 354268 355199 . + . ID=Thaps24634.2;Parent=Thaps24634;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 355666 357201 . + . ID=Thaps24635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB89];external_name=Thaps24635;logic_name=jgi_thaps3 chr13 ensembl transcript 355666 357201 . + . ID=Thaps24635;Parent=Thaps24635;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 355666 357201 . + 0 ID=Thaps24635;Parent=Thaps24635;rank=1 chr13 . exon 355666 357201 . + . ID=Thaps24635.1;Parent=Thaps24635;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 347935 348549 . - . ID=Thaps9404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB85];external_name=Thaps9404;logic_name=jgi_thaps3 chr13 ensembl transcript 347935 348549 . - . ID=Thaps9404;Parent=Thaps9404;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 347935 348549 . - 0 ID=Thaps9404;Parent=Thaps9404;rank=1 chr13 . exon 347935 348549 . - . ID=Thaps9404.1;Parent=Thaps9404;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 348985 350243 . + . ID=Thaps9405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB86];external_name=Thaps9405;logic_name=jgi_thaps3 chr13 ensembl transcript 348985 350243 . + . ID=Thaps9405;Parent=Thaps9405;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 348985 349112 . + 0 ID=Thaps9405;Parent=Thaps9405;rank=1 chr13 . exon 348985 349112 . + . ID=Thaps9405.1;Parent=Thaps9405;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 349409 349493 . + 0 ID=Thaps9405;Parent=Thaps9405;rank=2 chr13 . exon 349409 349493 . + . ID=Thaps9405.2;Parent=Thaps9405;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 349678 349814 . + 0 ID=Thaps9405;Parent=Thaps9405;rank=3 chr13 . exon 349678 349814 . + . ID=Thaps9405.3;Parent=Thaps9405;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 349942 350020 . + 0 ID=Thaps9405;Parent=Thaps9405;rank=4 chr13 . exon 349942 350020 . + . ID=Thaps9405.4;Parent=Thaps9405;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 350106 350243 . + 0 ID=Thaps9405;Parent=Thaps9405;rank=5 chr13 . exon 350106 350243 . + . ID=Thaps9405.5;Parent=Thaps9405;constitutive=1;rank=5 chr13 ensembl protein_coding_gene 350820 352705 . - . ID=Thaps9406;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB87];external_name=Thaps9406;logic_name=jgi_thaps3 chr13 ensembl transcript 350820 352705 . - . ID=Thaps9406;Parent=Thaps9406;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 350820 351706 . - 0 ID=Thaps9406;Parent=Thaps9406;rank=2 chr13 . exon 350820 351706 . - . ID=Thaps9406.2;Parent=Thaps9406;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 351814 352705 . - 0 ID=Thaps9406;Parent=Thaps9406;rank=1 chr13 . exon 351814 352705 . - . ID=Thaps9406.1;Parent=Thaps9406;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 362130 362348 . - . ID=Thaps20014;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB92];external_name=Thaps20014;logic_name=jgi_thaps3 chr13 ensembl transcript 362130 362348 . - . ID=Thaps20014;Parent=Thaps20014;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 362130 362348 . - 0 ID=Thaps20014;Parent=Thaps20014;rank=1 chr13 . exon 362130 362348 . - . ID=Thaps20014.1;Parent=Thaps20014;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 357465 359815 . - . ID=Thaps24636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB90];external_name=Thaps24636;logic_name=jgi_thaps3 chr13 ensembl transcript 357465 359815 . - . ID=Thaps24636;Parent=Thaps24636;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 357465 358229 . - 0 ID=Thaps24636;Parent=Thaps24636;rank=2 chr13 . exon 357465 358229 . - . ID=Thaps24636.2;Parent=Thaps24636;constitutive=1;rank=2 chr13 . CDS 358331 359815 . - 0 ID=Thaps24636;Parent=Thaps24636;rank=1 chr13 . exon 358331 359815 . - . ID=Thaps24636.1;Parent=Thaps24636;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 363580 363749 . - . ID=Thaps263992;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB94];external_name=Thaps263992;logic_name=jgi_thaps3 chr13 ensembl transcript 363580 363749 . - . ID=Thaps263992;Parent=Thaps263992;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 363580 363749 . - 0 ID=Thaps263992;Parent=Thaps263992;rank=1 chr13 . exon 363580 363749 . - . ID=Thaps263992.1;Parent=Thaps263992;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 360308 361669 . + . ID=Thaps9410;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB91];external_name=Thaps9410;logic_name=jgi_thaps3 chr13 ensembl transcript 360308 361669 . + . ID=Thaps9410;Parent=Thaps9410;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 360308 361669 . + 0 ID=Thaps9410;Parent=Thaps9410;rank=1 chr13 . exon 360308 361669 . + . ID=Thaps9410.1;Parent=Thaps9410;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 362963 363385 . + . ID=Thaps9412;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB93];external_name=Thaps9412;logic_name=jgi_thaps3 chr13 ensembl transcript 362963 363385 . + . ID=Thaps9412;Parent=Thaps9412;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 362963 363385 . + 0 ID=Thaps9412;Parent=Thaps9412;rank=1 chr13 . exon 362963 363385 . + . ID=Thaps9412.1;Parent=Thaps9412;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 365707 369623 . + . ID=Thaps9414;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB95];external_name=Thaps9414;logic_name=jgi_thaps3 chr13 ensembl transcript 365707 369623 . + . ID=Thaps9414;Parent=Thaps9414;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 365707 367376 . + 0 ID=Thaps9414;Parent=Thaps9414;rank=1 chr13 . exon 365707 367376 . + . ID=Thaps9414.1;Parent=Thaps9414;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 367469 369623 . + 0 ID=Thaps9414;Parent=Thaps9414;rank=2 chr13 . repeat_region 372803 372811 . ? . description=dust chr13 . repeat_region 374666 374697 . ? . description=trf chr13 . repeat_region 377128 377150 . ? . description=trf chr13 ensembl protein_coding_gene 373192 376570 . + . ID=Thaps24639;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB97];external_name=Thaps24639;logic_name=jgi_thaps3 chr13 ensembl transcript 373192 376570 . + . ID=Thaps24639;Parent=Thaps24639;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 373192 373245 . + 0 ID=Thaps24639;Parent=Thaps24639;rank=1 chr13 . exon 373192 373245 . + . ID=Thaps24639.1;Parent=Thaps24639;constitutive=1;rank=1 chr13 . CDS 373676 376570 . + 0 ID=Thaps24639;Parent=Thaps24639;rank=2 chr13 . exon 373676 376570 . + . ID=Thaps24639.2;Parent=Thaps24639;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 370821 371777 . - . ID=Thaps29825;biotype=protein_coding;description=40S ribosomal protein S8 [Source:UniProtKB/TrEMBL%3BAcc:B8CB96];external_name=RS8;logic_name=jgi_thaps3 chr13 ensembl transcript 370821 371777 . - . ID=Thaps29825;Parent=Thaps29825;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 370821 371420 . - 0 ID=Thaps29825;Parent=Thaps29825;rank=2 chr13 . exon 370821 371420 . - . ID=Thaps29825.2;Parent=Thaps29825;constitutive=1;rank=2 chr13 . CDS 371775 371777 . - 0 ID=Thaps29825;Parent=Thaps29825;rank=1 chr13 . exon 371775 371777 . - . ID=Thaps29825.1;Parent=Thaps29825;constitutive=1;rank=1 chr13 . exon 367469 369623 . + . ID=Thaps9414.2;Parent=Thaps9414;constitutive=1;ensembl_end_phase=1;rank=2 chr13 ensembl protein_coding_gene 377116 377622 . + . ID=Thaps9417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB98];external_name=Thaps9417;logic_name=jgi_thaps3 chr13 ensembl transcript 377116 377622 . + . ID=Thaps9417;Parent=Thaps9417;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 377116 377622 . + 0 ID=Thaps9417;Parent=Thaps9417;rank=1 chr13 . exon 377116 377622 . + . ID=Thaps9417.1;Parent=Thaps9417;constitutive=1;rank=1 chr13 . repeat_region 378381 378488 . + . description=TE2c_TP chr13 . repeat_region 378436 378503 . - . description=TE2c_TP chr13 ensembl protein_coding_gene 386187 389131 . + . ID=Thaps263994;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA1];external_name=Thaps263994;logic_name=jgi_thaps3 chr13 ensembl transcript 386187 389131 . + . ID=Thaps263994;Parent=Thaps263994;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 386187 386564 . + 0 ID=Thaps263994;Parent=Thaps263994;rank=1 chr13 . exon 386187 386564 . + . ID=Thaps263994.1;Parent=Thaps263994;constitutive=1;rank=1 chr13 . CDS 386595 388192 . + 0 ID=Thaps263994;Parent=Thaps263994;rank=2 chr13 . exon 386595 388192 . + . ID=Thaps263994.2;Parent=Thaps263994;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 388236 388287 . + 0 ID=Thaps263994;Parent=Thaps263994;rank=3 chr13 . CDS 388320 388643 . + 0 ID=Thaps263994;Parent=Thaps263994;rank=4 chr13 . CDS 388680 388962 . + 0 ID=Thaps263994;Parent=Thaps263994;rank=5 chr13 . CDS 388987 389131 . + 0 ID=Thaps263994;Parent=Thaps263994;rank=6 chr13 ensembl protein_coding_gene 382242 383707 . - . ID=Thaps9419;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CB99];external_name=Thaps9419;logic_name=jgi_thaps3 chr13 ensembl transcript 382242 383707 . - . ID=Thaps9419;Parent=Thaps9419;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 382242 382413 . - 0 ID=Thaps9419;Parent=Thaps9419;rank=4 chr13 . exon 382242 382413 . - . ID=Thaps9419.4;Parent=Thaps9419;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 382486 382542 . - 0 ID=Thaps9419;Parent=Thaps9419;rank=3 chr13 . exon 382486 382542 . - . ID=Thaps9419.3;Parent=Thaps9419;constitutive=1;rank=3 chr13 . CDS 382626 383074 . - 0 ID=Thaps9419;Parent=Thaps9419;rank=2 chr13 . exon 382626 383074 . - . ID=Thaps9419.2;Parent=Thaps9419;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 383210 383707 . - 0 ID=Thaps9419;Parent=Thaps9419;rank=1 chr13 . exon 383210 383707 . - . ID=Thaps9419.1;Parent=Thaps9419;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 384233 385600 . - . ID=Thaps9420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA0];external_name=Thaps9420;logic_name=jgi_thaps3 chr13 ensembl transcript 384233 385600 . - . ID=Thaps9420;Parent=Thaps9420;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 384233 385600 . - 0 ID=Thaps9420;Parent=Thaps9420;rank=1 chr13 . exon 384233 385600 . - . ID=Thaps9420.1;Parent=Thaps9420;constitutive=1;rank=1 chr13 . repeat_region 391111 391118 . ? . description=dust chr13 . repeat_region 392132 392154 . ? . description=trf chr13 . repeat_region 392132 392154 . ? . description=dust chr13 ensembl protein_coding_gene 389499 391398 . - . ID=Thaps24641;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA2];external_name=Thaps24641;logic_name=jgi_thaps3 chr13 ensembl transcript 389499 391398 . - . ID=Thaps24641;Parent=Thaps24641;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 389499 389751 . - 0 ID=Thaps24641;Parent=Thaps24641;rank=3 chr13 . exon 389499 389751 . - . ID=Thaps24641.3;Parent=Thaps24641;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 389826 390691 . - 0 ID=Thaps24641;Parent=Thaps24641;rank=2 chr13 . exon 389826 390691 . - . ID=Thaps24641.2;Parent=Thaps24641;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 390775 391398 . - 0 ID=Thaps24641;Parent=Thaps24641;rank=1 chr13 . exon 390775 391398 . - . ID=Thaps24641.1;Parent=Thaps24641;constitutive=1;rank=1 chr13 . exon 388236 388287 . + . ID=Thaps263994.3;Parent=Thaps263994;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . exon 388320 388643 . + . ID=Thaps263994.4;Parent=Thaps263994;constitutive=1;rank=4 chr13 . exon 388680 388962 . + . ID=Thaps263994.5;Parent=Thaps263994;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . exon 388987 389131 . + . ID=Thaps263994.6;Parent=Thaps263994;constitutive=1;ensembl_end_phase=1;rank=6 chr13 ensembl protein_coding_gene 393329 394190 . - . ID=Thaps9423;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA3];external_name=Thaps9423;logic_name=jgi_thaps3 chr13 ensembl transcript 393329 394190 . - . ID=Thaps9423;Parent=Thaps9423;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 393329 393426 . - 0 ID=Thaps9423;Parent=Thaps9423;rank=2 chr13 . exon 393329 393426 . - . ID=Thaps9423.2;Parent=Thaps9423;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 393578 394190 . - 0 ID=Thaps9423;Parent=Thaps9423;rank=1 chr13 . exon 393578 394190 . - . ID=Thaps9423.1;Parent=Thaps9423;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 394743 397250 . + . ID=Thaps9424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA4];external_name=Thaps9424;logic_name=jgi_thaps3 chr13 ensembl transcript 394743 397250 . + . ID=Thaps9424;Parent=Thaps9424;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 394743 397250 . + 0 ID=Thaps9424;Parent=Thaps9424;rank=1 chr13 . exon 394743 397250 . + . ID=Thaps9424.1;Parent=Thaps9424;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 400508 401317 . + . ID=Thaps24642;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA6];external_name=Thaps24642;logic_name=jgi_thaps3 chr13 ensembl transcript 400508 401317 . + . ID=Thaps24642;Parent=Thaps24642;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 400508 401317 . + 0 ID=Thaps24642;Parent=Thaps24642;rank=1 chr13 . exon 400508 401317 . + . ID=Thaps24642.1;Parent=Thaps24642;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 403536 404376 . + . ID=Thaps24644;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA8];external_name=Thaps24644;logic_name=jgi_thaps3 chr13 ensembl transcript 403536 404376 . + . ID=Thaps24644;Parent=Thaps24644;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 403536 404001 . + 0 ID=Thaps24644;Parent=Thaps24644;rank=1 chr13 . exon 403536 404001 . + . ID=Thaps24644.1;Parent=Thaps24644;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 404110 404310 . + 0 ID=Thaps24644;Parent=Thaps24644;rank=2 chr13 . exon 404110 404310 . + . ID=Thaps24644.2;Parent=Thaps24644;constitutive=1;rank=2 chr13 . CDS 404342 404376 . + 0 ID=Thaps24644;Parent=Thaps24644;rank=3 chr13 . exon 404342 404376 . + . ID=Thaps24644.3;Parent=Thaps24644;constitutive=1;ensembl_end_phase=2;rank=3 chr13 ensembl protein_coding_gene 404952 409201 . - . ID=Thaps263996;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA9];external_name=Thaps263996;logic_name=jgi_thaps3 chr13 ensembl transcript 404952 409201 . - . ID=Thaps263996;Parent=Thaps263996;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 404952 405378 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=13 chr13 . exon 404952 405378 . - . ID=Thaps263996.13;Parent=Thaps263996;constitutive=1;ensembl_end_phase=1;rank=13 chr13 . CDS 405458 405545 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=12 chr13 . exon 405458 405545 . - . ID=Thaps263996.12;Parent=Thaps263996;constitutive=1;ensembl_end_phase=1;rank=12 chr13 . CDS 405631 405824 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=11 chr13 . exon 405631 405824 . - . ID=Thaps263996.11;Parent=Thaps263996;constitutive=1;ensembl_end_phase=2;rank=11 chr13 . CDS 405900 406401 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=10 chr13 . exon 405900 406401 . - . ID=Thaps263996.10;Parent=Thaps263996;constitutive=1;ensembl_end_phase=1;rank=10 chr13 . CDS 406483 406726 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=9 chr13 . exon 406483 406726 . - . ID=Thaps263996.9;Parent=Thaps263996;constitutive=1;ensembl_end_phase=1;rank=9 chr13 . CDS 406815 407130 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=8 chr13 . exon 406815 407130 . - . ID=Thaps263996.8;Parent=Thaps263996;constitutive=1;ensembl_end_phase=1;rank=8 chr13 . CDS 407217 407283 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=7 chr13 . CDS 407369 407455 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=6 chr13 . CDS 407510 407735 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=5 chr13 . CDS 407775 407956 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=4 chr13 . CDS 408035 408157 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=3 chr13 . CDS 408413 408712 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=2 chr13 . CDS 408958 409201 . - 0 ID=Thaps263996;Parent=Thaps263996;rank=1 chr13 ensembl protein_coding_gene 401432 403093 . + . ID=Thaps42213;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA7];external_name=Thaps42213;logic_name=jgi_thaps3 chr13 ensembl transcript 401432 403093 . + . ID=Thaps42213;Parent=Thaps42213;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 401432 403093 . + 0 ID=Thaps42213;Parent=Thaps42213;rank=1 chr13 . exon 401432 403093 . + . ID=Thaps42213.1;Parent=Thaps42213;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 397446 400100 . - . ID=Thaps9425;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBA5];external_name=Thaps9425;logic_name=jgi_thaps3 chr13 ensembl transcript 397446 400100 . - . ID=Thaps9425;Parent=Thaps9425;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 397446 400100 . - 0 ID=Thaps9425;Parent=Thaps9425;rank=1 chr13 . exon 397446 400100 . - . ID=Thaps9425.1;Parent=Thaps9425;constitutive=1;rank=1 chr13 . exon 407217 407283 . - . ID=Thaps263996.7;Parent=Thaps263996;constitutive=1;ensembl_end_phase=1;rank=7 chr13 . exon 407369 407455 . - . ID=Thaps263996.6;Parent=Thaps263996;constitutive=1;rank=6 chr13 . exon 407510 407735 . - . ID=Thaps263996.5;Parent=Thaps263996;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . exon 407775 407956 . - . ID=Thaps263996.4;Parent=Thaps263996;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . exon 408035 408157 . - . ID=Thaps263996.3;Parent=Thaps263996;constitutive=1;rank=3 chr13 . exon 408413 408712 . - . ID=Thaps263996.2;Parent=Thaps263996;constitutive=1;rank=2 chr13 . exon 408958 409201 . - . ID=Thaps263996.1;Parent=Thaps263996;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 415306 418250 . - . ID=Thaps263997;biotype=protein_coding;description=Alpha subunit of tetrameric clathrin adaptor complex AP1 [Source:UniProtKB/TrEMBL%3BAcc:B8CBB0];external_name=APA1;logic_name=jgi_thaps3 chr13 ensembl transcript 415306 418250 . - . ID=Thaps263997;Parent=Thaps263997;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 415306 415450 . - 0 ID=Thaps263997;Parent=Thaps263997;rank=6 chr13 . exon 415306 415450 . - . ID=Thaps263997.6;Parent=Thaps263997;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . CDS 415475 415757 . - 0 ID=Thaps263997;Parent=Thaps263997;rank=5 chr13 . exon 415475 415757 . - . ID=Thaps263997.5;Parent=Thaps263997;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . CDS 415794 416117 . - 0 ID=Thaps263997;Parent=Thaps263997;rank=4 chr13 . exon 415794 416117 . - . ID=Thaps263997.4;Parent=Thaps263997;constitutive=1;rank=4 chr13 . CDS 416150 416201 . - 0 ID=Thaps263997;Parent=Thaps263997;rank=3 chr13 . exon 416150 416201 . - . ID=Thaps263997.3;Parent=Thaps263997;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 416245 417842 . - 0 ID=Thaps263997;Parent=Thaps263997;rank=2 chr13 . exon 416245 417842 . - . ID=Thaps263997.2;Parent=Thaps263997;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 417873 418250 . - 0 ID=Thaps263997;Parent=Thaps263997;rank=1 chr13 ensembl protein_coding_gene 422140 423660 . + . ID=Thaps24647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBB3];external_name=Thaps24647;logic_name=jgi_thaps3 chr13 ensembl transcript 422140 423660 . + . ID=Thaps24647;Parent=Thaps24647;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 422140 423106 . + 0 ID=Thaps24647;Parent=Thaps24647;rank=1 chr13 . exon 422140 423106 . + . ID=Thaps24647.1;Parent=Thaps24647;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 423193 423316 . + 0 ID=Thaps24647;Parent=Thaps24647;rank=2 chr13 . exon 423193 423316 . + . ID=Thaps24647.2;Parent=Thaps24647;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 423411 423660 . + 0 ID=Thaps24647;Parent=Thaps24647;rank=3 chr13 . exon 423411 423660 . + . ID=Thaps24647.3;Parent=Thaps24647;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . exon 417873 418250 . - . ID=Thaps263997.1;Parent=Thaps263997;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 418836 420290 . + . ID=Thaps9431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBB1];external_name=Thaps9431;logic_name=jgi_thaps3 chr13 ensembl transcript 418836 420290 . + . ID=Thaps9431;Parent=Thaps9431;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 418836 420290 . + 0 ID=Thaps9431;Parent=Thaps9431;rank=1 chr13 . exon 418836 420290 . + . ID=Thaps9431.1;Parent=Thaps9431;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 420587 421720 . - . ID=Thaps9432;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBB2];external_name=Thaps9432;logic_name=jgi_thaps3 chr13 ensembl transcript 420587 421720 . - . ID=Thaps9432;Parent=Thaps9432;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 420587 421720 . - 0 ID=Thaps9432;Parent=Thaps9432;rank=1 chr13 . exon 420587 421720 . - . ID=Thaps9432.1;Parent=Thaps9432;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 424009 425573 . + . ID=Thaps9434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBB4];external_name=Thaps9434;logic_name=jgi_thaps3 chr13 ensembl transcript 424009 425573 . + . ID=Thaps9434;Parent=Thaps9434;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 424009 424597 . + 0 ID=Thaps9434;Parent=Thaps9434;rank=1 chr13 . exon 424009 424597 . + . ID=Thaps9434.1;Parent=Thaps9434;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 424744 424850 . + 0 ID=Thaps9434;Parent=Thaps9434;rank=2 chr13 . exon 424744 424850 . + . ID=Thaps9434.2;Parent=Thaps9434;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 424954 424996 . + 0 ID=Thaps9434;Parent=Thaps9434;rank=3 chr13 . exon 424954 424996 . + . ID=Thaps9434.3;Parent=Thaps9434;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 425069 425158 . + 0 ID=Thaps9434;Parent=Thaps9434;rank=4 chr13 . exon 425069 425158 . + . ID=Thaps9434.4;Parent=Thaps9434;constitutive=1;rank=4 chr13 . CDS 425254 425573 . + 0 ID=Thaps9434;Parent=Thaps9434;rank=5 chr13 . exon 425254 425573 . + . ID=Thaps9434.5;Parent=Thaps9434;constitutive=1;ensembl_end_phase=2;rank=5 chr13 ensembl protein_coding_gene 426775 427098 . - . ID=Thaps9435;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBB5];external_name=Thaps9435;logic_name=jgi_thaps3 chr13 ensembl transcript 426775 427098 . - . ID=Thaps9435;Parent=Thaps9435;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 426775 427098 . - 0 ID=Thaps9435;Parent=Thaps9435;rank=1 chr13 . exon 426775 427098 . - . ID=Thaps9435.1;Parent=Thaps9435;constitutive=1;rank=1 chr13 . repeat_region 431608 431618 . ? . description=dust chr13 ensembl protein_coding_gene 435905 438488 . - . ID=Thaps24649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBC1];external_name=Thaps24649;logic_name=jgi_thaps3 chr13 ensembl transcript 435905 438488 . - . ID=Thaps24649;Parent=Thaps24649;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 435905 436215 . - 0 ID=Thaps24649;Parent=Thaps24649;rank=2 chr13 . exon 435905 436215 . - . ID=Thaps24649.2;Parent=Thaps24649;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 436286 438488 . - 0 ID=Thaps24649;Parent=Thaps24649;rank=1 chr13 . exon 436286 438488 . - . ID=Thaps24649.1;Parent=Thaps24649;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 432010 433393 . + . ID=Thaps264001;biotype=protein_coding;description=Oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8CBB9];external_name=Thaps264001;logic_name=jgi_thaps3 chr13 ensembl transcript 432010 433393 . + . ID=Thaps264001;Parent=Thaps264001;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 432010 433393 . + 0 ID=Thaps264001;Parent=Thaps264001;rank=1 chr13 . exon 432010 433393 . + . ID=Thaps264001.1;Parent=Thaps264001;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 429780 430118 . + . ID=Thaps37198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBB7];external_name=Thaps37198;logic_name=jgi_thaps3 chr13 ensembl transcript 429780 430118 . + . ID=Thaps37198;Parent=Thaps37198;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 429780 430118 . + 0 ID=Thaps37198;Parent=Thaps37198;rank=1 chr13 . exon 429780 430118 . + . ID=Thaps37198.1;Parent=Thaps37198;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 427257 428252 . + . ID=Thaps9436;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBB6];external_name=Thaps9436;logic_name=jgi_thaps3 chr13 ensembl transcript 427257 428252 . + . ID=Thaps9436;Parent=Thaps9436;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 427257 428252 . + 0 ID=Thaps9436;Parent=Thaps9436;rank=1 chr13 . exon 427257 428252 . + . ID=Thaps9436.1;Parent=Thaps9436;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 430544 431511 . - . ID=Thaps9438;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBB8];external_name=Thaps9438;logic_name=jgi_thaps3 chr13 ensembl transcript 430544 431511 . - . ID=Thaps9438;Parent=Thaps9438;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 430544 430858 . - 0 ID=Thaps9438;Parent=Thaps9438;rank=3 chr13 . exon 430544 430858 . - . ID=Thaps9438.3;Parent=Thaps9438;constitutive=1;rank=3 chr13 . CDS 430952 431152 . - 0 ID=Thaps9438;Parent=Thaps9438;rank=2 chr13 . exon 430952 431152 . - . ID=Thaps9438.2;Parent=Thaps9438;constitutive=1;rank=2 chr13 . CDS 431314 431511 . - 0 ID=Thaps9438;Parent=Thaps9438;rank=1 chr13 . exon 431314 431511 . - . ID=Thaps9438.1;Parent=Thaps9438;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 433641 435224 . - . ID=Thaps9440;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBC0];external_name=Thaps9440;logic_name=jgi_thaps3 chr13 ensembl transcript 433641 435224 . - . ID=Thaps9440;Parent=Thaps9440;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 433641 435224 . - 0 ID=Thaps9440;Parent=Thaps9440;rank=1 chr13 . exon 433641 435224 . - . ID=Thaps9440.1;Parent=Thaps9440;constitutive=1;rank=1 chr13 . repeat_region 440141 440198 . ? . description=trf chr13 . repeat_region 440372 440428 . ? . description=trf chr13 . repeat_region 444223 444251 . ? . description=trf chr13 ensembl protein_coding_gene 445698 447370 . + . ID=Thaps264002;biotype=protein_coding;description=Guanyl nucleotide exchange factor [Source:UniProtKB/TrEMBL%3BAcc:B8CBC4];external_name=Thaps264002;logic_name=jgi_thaps3 chr13 ensembl transcript 445698 447370 . + . ID=Thaps264002;Parent=Thaps264002;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 445698 445837 . + 0 ID=Thaps264002;Parent=Thaps264002;rank=1 chr13 . exon 445698 445837 . + . ID=Thaps264002.1;Parent=Thaps264002;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 445939 446153 . + 0 ID=Thaps264002;Parent=Thaps264002;rank=2 chr13 . exon 445939 446153 . + . ID=Thaps264002.2;Parent=Thaps264002;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 446238 446426 . + 0 ID=Thaps264002;Parent=Thaps264002;rank=3 chr13 . exon 446238 446426 . + . ID=Thaps264002.3;Parent=Thaps264002;constitutive=1;rank=3 chr13 . CDS 446631 446739 . + 0 ID=Thaps264002;Parent=Thaps264002;rank=4 chr13 . exon 446631 446739 . + . ID=Thaps264002.4;Parent=Thaps264002;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 446821 447370 . + 0 ID=Thaps264002;Parent=Thaps264002;rank=5 chr13 ensembl protein_coding_gene 439195 440759 . - . ID=Thaps9442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBC2];external_name=Thaps9442;logic_name=jgi_thaps3 chr13 ensembl transcript 439195 440759 . - . ID=Thaps9442;Parent=Thaps9442;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 439195 439736 . - 0 ID=Thaps9442;Parent=Thaps9442;rank=4 chr13 . exon 439195 439736 . - . ID=Thaps9442.4;Parent=Thaps9442;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 439835 440055 . - 0 ID=Thaps9442;Parent=Thaps9442;rank=3 chr13 . exon 439835 440055 . - . ID=Thaps9442.3;Parent=Thaps9442;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 440372 440425 . - 0 ID=Thaps9442;Parent=Thaps9442;rank=2 chr13 . exon 440372 440425 . - . ID=Thaps9442.2;Parent=Thaps9442;constitutive=1;rank=2 chr13 . CDS 440662 440759 . - 0 ID=Thaps9442;Parent=Thaps9442;rank=1 chr13 . exon 440662 440759 . - . ID=Thaps9442.1;Parent=Thaps9442;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 441102 443696 . + . ID=Thaps9443;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBC3];external_name=Thaps9443;logic_name=jgi_thaps3 chr13 ensembl transcript 441102 443696 . + . ID=Thaps9443;Parent=Thaps9443;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 441102 443696 . + 0 ID=Thaps9443;Parent=Thaps9443;rank=1 chr13 . exon 441102 443696 . + . ID=Thaps9443.1;Parent=Thaps9443;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 449029 449950 . + . ID=Thaps24653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBC6];external_name=Thaps24653;logic_name=jgi_thaps3 chr13 ensembl transcript 449029 449950 . + . ID=Thaps24653;Parent=Thaps24653;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 449029 449208 . + 0 ID=Thaps24653;Parent=Thaps24653;rank=1 chr13 . exon 449029 449208 . + . ID=Thaps24653.1;Parent=Thaps24653;constitutive=1;rank=1 chr13 . CDS 449483 449813 . + 0 ID=Thaps24653;Parent=Thaps24653;rank=2 chr13 . exon 449483 449813 . + . ID=Thaps24653.2;Parent=Thaps24653;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 449910 449950 . + 0 ID=Thaps24653;Parent=Thaps24653;rank=3 chr13 . exon 449910 449950 . + . ID=Thaps24653.3;Parent=Thaps24653;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . exon 446821 447370 . + . ID=Thaps264002.5;Parent=Thaps264002;constitutive=1;ensembl_end_phase=1;rank=5 chr13 ensembl protein_coding_gene 447559 448486 . - . ID=Thaps37054;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBC5];external_name=Thaps37054;logic_name=jgi_thaps3 chr13 ensembl transcript 447559 448486 . - . ID=Thaps37054;Parent=Thaps37054;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 447559 447959 . - 0 ID=Thaps37054;Parent=Thaps37054;rank=3 chr13 . exon 447559 447959 . - . ID=Thaps37054.3;Parent=Thaps37054;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 448043 448179 . - 0 ID=Thaps37054;Parent=Thaps37054;rank=2 chr13 . exon 448043 448179 . - . ID=Thaps37054.2;Parent=Thaps37054;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 448269 448486 . - 0 ID=Thaps37054;Parent=Thaps37054;rank=1 chr13 . exon 448269 448486 . - . ID=Thaps37054.1;Parent=Thaps37054;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 452234 452923 . - . ID=Thaps37232;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBC8];external_name=Thaps37232;logic_name=jgi_thaps3 chr13 ensembl transcript 452234 452923 . - . ID=Thaps37232;Parent=Thaps37232;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 452234 452923 . - 0 ID=Thaps37232;Parent=Thaps37232;rank=1 chr13 . exon 452234 452923 . - . ID=Thaps37232.1;Parent=Thaps37232;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 450491 451874 . - . ID=Thaps9447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBC7];external_name=Thaps9447;logic_name=jgi_thaps3 chr13 ensembl transcript 450491 451874 . - . ID=Thaps9447;Parent=Thaps9447;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 450491 450511 . - 0 ID=Thaps9447;Parent=Thaps9447;rank=3 chr13 . exon 450491 450511 . - . ID=Thaps9447.3;Parent=Thaps9447;constitutive=1;rank=3 chr13 . CDS 450549 450596 . - 0 ID=Thaps9447;Parent=Thaps9447;rank=2 chr13 . exon 450549 450596 . - . ID=Thaps9447.2;Parent=Thaps9447;constitutive=1;rank=2 chr13 . CDS 450666 451874 . - 0 ID=Thaps9447;Parent=Thaps9447;rank=1 chr13 . exon 450666 451874 . - . ID=Thaps9447.1;Parent=Thaps9447;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 453665 456508 . + . ID=Thaps9449;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBC9];external_name=Thaps9449;logic_name=jgi_thaps3 chr13 ensembl transcript 453665 456508 . + . ID=Thaps9449;Parent=Thaps9449;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 453665 453831 . + 0 ID=Thaps9449;Parent=Thaps9449;rank=1 chr13 . exon 453665 453831 . + . ID=Thaps9449.1;Parent=Thaps9449;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 453868 455653 . + 0 ID=Thaps9449;Parent=Thaps9449;rank=2 chr13 . exon 453868 455653 . + . ID=Thaps9449.2;Parent=Thaps9449;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 455738 456508 . + 0 ID=Thaps9449;Parent=Thaps9449;rank=3 chr13 . exon 455738 456508 . + . ID=Thaps9449.3;Parent=Thaps9449;constitutive=1;rank=3 chr13 . repeat_region 462287 462399 . ? . description=trf chr13 . repeat_region 463464 463507 . ? . description=trf chr13 ensembl protein_coding_gene 465664 471564 . + . ID=Thaps24655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBD2];external_name=Thaps24655;logic_name=jgi_thaps3 chr13 ensembl transcript 465664 471564 . + . ID=Thaps24655;Parent=Thaps24655;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 465664 471564 . + 0 ID=Thaps24655;Parent=Thaps24655;rank=1 chr13 . exon 465664 471564 . + . ID=Thaps24655.1;Parent=Thaps24655;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 457268 460048 . - . ID=Thaps264004;biotype=protein_coding;description=Cation transporting ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8CBD0];external_name=Thaps264004;logic_name=jgi_thaps3 chr13 ensembl transcript 457268 460048 . - . ID=Thaps264004;Parent=Thaps264004;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 457268 457743 . - 0 ID=Thaps264004;Parent=Thaps264004;rank=6 chr13 . exon 457268 457743 . - . ID=Thaps264004.6;Parent=Thaps264004;constitutive=1;ensembl_end_phase=2;rank=6 chr13 . CDS 457832 458199 . - 0 ID=Thaps264004;Parent=Thaps264004;rank=5 chr13 . exon 457832 458199 . - . ID=Thaps264004.5;Parent=Thaps264004;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 458283 458436 . - 0 ID=Thaps264004;Parent=Thaps264004;rank=4 chr13 . exon 458283 458436 . - . ID=Thaps264004.4;Parent=Thaps264004;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 458512 459157 . - 0 ID=Thaps264004;Parent=Thaps264004;rank=3 chr13 . exon 458512 459157 . - . ID=Thaps264004.3;Parent=Thaps264004;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 459282 459829 . - 0 ID=Thaps264004;Parent=Thaps264004;rank=2 chr13 . exon 459282 459829 . - . ID=Thaps264004.2;Parent=Thaps264004;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 459912 460048 . - 0 ID=Thaps264004;Parent=Thaps264004;rank=1 chr13 . exon 459912 460048 . - . ID=Thaps264004.1;Parent=Thaps264004;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 462852 463759 . - . ID=Thaps264005;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBD1];external_name=Thaps264005;logic_name=jgi_thaps3 chr13 ensembl transcript 462852 463759 . - . ID=Thaps264005;Parent=Thaps264005;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 462852 463060 . - 0 ID=Thaps264005;Parent=Thaps264005;rank=4 chr13 . exon 462852 463060 . - . ID=Thaps264005.4;Parent=Thaps264005;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 463150 463200 . - 0 ID=Thaps264005;Parent=Thaps264005;rank=3 chr13 . exon 463150 463200 . - . ID=Thaps264005.3;Parent=Thaps264005;constitutive=1;rank=3 chr13 . CDS 463246 463441 . - 0 ID=Thaps264005;Parent=Thaps264005;rank=2 chr13 . exon 463246 463441 . - . ID=Thaps264005.2;Parent=Thaps264005;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 463499 463759 . - 0 ID=Thaps264005;Parent=Thaps264005;rank=1 chr13 . exon 463499 463759 . - . ID=Thaps264005.1;Parent=Thaps264005;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 472270 476382 . + . ID=Thaps24656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBD3];external_name=Thaps24656;logic_name=jgi_thaps3 chr13 ensembl transcript 472270 476382 . + . ID=Thaps24656;Parent=Thaps24656;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 472270 473523 . + 0 ID=Thaps24656;Parent=Thaps24656;rank=1 chr13 . exon 472270 473523 . + . ID=Thaps24656.1;Parent=Thaps24656;constitutive=1;rank=1 chr13 . CDS 473566 473723 . + 0 ID=Thaps24656;Parent=Thaps24656;rank=2 chr13 . exon 473566 473723 . + . ID=Thaps24656.2;Parent=Thaps24656;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 473809 474315 . + 0 ID=Thaps24656;Parent=Thaps24656;rank=3 chr13 . exon 473809 474315 . + . ID=Thaps24656.3;Parent=Thaps24656;constitutive=1;rank=3 chr13 . CDS 474408 476382 . + 0 ID=Thaps24656;Parent=Thaps24656;rank=4 chr13 . exon 474408 476382 . + . ID=Thaps24656.4;Parent=Thaps24656;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . repeat_region 482474 482500 . ? . description=trf chr13 . repeat_region 484770 484782 . ? . description=dust chr13 . repeat_region 485907 485916 . ? . description=dust chr13 ensembl protein_coding_gene 478463 479218 . - . ID=Thaps24657;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBD5];external_name=Thaps24657;logic_name=jgi_thaps3 chr13 ensembl transcript 478463 479218 . - . ID=Thaps24657;Parent=Thaps24657;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 478463 479218 . - 0 ID=Thaps24657;Parent=Thaps24657;rank=1 chr13 . exon 478463 479218 . - . ID=Thaps24657.1;Parent=Thaps24657;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 479750 480946 . - . ID=Thaps24658;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBD6];external_name=Thaps24658;logic_name=jgi_thaps3 chr13 ensembl transcript 479750 480946 . - . ID=Thaps24658;Parent=Thaps24658;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 479750 480946 . - 0 ID=Thaps24658;Parent=Thaps24658;rank=1 chr13 . exon 479750 480946 . - . ID=Thaps24658.1;Parent=Thaps24658;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 481141 482016 . - . ID=Thaps24659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBD7];external_name=Thaps24659;logic_name=jgi_thaps3 chr13 ensembl transcript 481141 482016 . - . ID=Thaps24659;Parent=Thaps24659;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 481141 482016 . - 0 ID=Thaps24659;Parent=Thaps24659;rank=1 chr13 . exon 481141 482016 . - . ID=Thaps24659.1;Parent=Thaps24659;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 476553 477782 . - . ID=Thaps9454;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBD4];external_name=Thaps9454;logic_name=jgi_thaps3 chr13 ensembl transcript 476553 477782 . - . ID=Thaps9454;Parent=Thaps9454;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 476553 477782 . - 0 ID=Thaps9454;Parent=Thaps9454;rank=1 chr13 . exon 476553 477782 . - . ID=Thaps9454.1;Parent=Thaps9454;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 482652 483962 . + . ID=Thaps9458;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBD8];external_name=Thaps9458;logic_name=jgi_thaps3 chr13 ensembl transcript 482652 483962 . + . ID=Thaps9458;Parent=Thaps9458;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 482652 483962 . + 0 ID=Thaps9458;Parent=Thaps9458;rank=1 chr13 . exon 482652 483962 . + . ID=Thaps9458.1;Parent=Thaps9458;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 484109 484998 . - . ID=Thaps9459;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBD9];external_name=Thaps9459;logic_name=jgi_thaps3 chr13 ensembl transcript 484109 484998 . - . ID=Thaps9459;Parent=Thaps9459;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 484109 484762 . - 0 ID=Thaps9459;Parent=Thaps9459;rank=2 chr13 . exon 484109 484762 . - . ID=Thaps9459.2;Parent=Thaps9459;constitutive=1;rank=2 chr13 . CDS 484795 484998 . - 0 ID=Thaps9459;Parent=Thaps9459;rank=1 chr13 . exon 484795 484998 . - . ID=Thaps9459.1;Parent=Thaps9459;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 485969 488194 . + . ID=Thaps9460;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBE0];external_name=Thaps9460;logic_name=jgi_thaps3 chr13 ensembl transcript 485969 488194 . + . ID=Thaps9460;Parent=Thaps9460;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 485969 488194 . + 0 ID=Thaps9460;Parent=Thaps9460;rank=1 chr13 . exon 485969 488194 . + . ID=Thaps9460.1;Parent=Thaps9460;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 488400 490140 . - . ID=Thaps24660;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBE1];external_name=Thaps24660;logic_name=jgi_thaps3 chr13 ensembl transcript 488400 490140 . - . ID=Thaps24660;Parent=Thaps24660;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 488400 488413 . - 0 ID=Thaps24660;Parent=Thaps24660;rank=3 chr13 . exon 488400 488413 . - . ID=Thaps24660.3;Parent=Thaps24660;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 488442 489776 . - 0 ID=Thaps24660;Parent=Thaps24660;rank=2 chr13 . exon 488442 489776 . - . ID=Thaps24660.2;Parent=Thaps24660;constitutive=1;rank=2 chr13 . CDS 489822 490140 . - 0 ID=Thaps24660;Parent=Thaps24660;rank=1 chr13 . exon 489822 490140 . - . ID=Thaps24660.1;Parent=Thaps24660;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 494233 494908 . + . ID=Thaps29842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBE4];external_name=Thaps29842;logic_name=jgi_thaps3 chr13 ensembl transcript 494233 494908 . + . ID=Thaps29842;Parent=Thaps29842;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 494233 494298 . + 0 ID=Thaps29842;Parent=Thaps29842;rank=1 chr13 . exon 494233 494298 . + . ID=Thaps29842.1;Parent=Thaps29842;constitutive=1;rank=1 chr13 . CDS 494432 494908 . + 0 ID=Thaps29842;Parent=Thaps29842;rank=2 chr13 . exon 494432 494908 . + . ID=Thaps29842.2;Parent=Thaps29842;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 490445 491599 . + . ID=Thaps9462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBE2];external_name=Thaps9462;logic_name=jgi_thaps3 chr13 ensembl transcript 490445 491599 . + . ID=Thaps9462;Parent=Thaps9462;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 490445 491599 . + 0 ID=Thaps9462;Parent=Thaps9462;rank=1 chr13 . exon 490445 491599 . + . ID=Thaps9462.1;Parent=Thaps9462;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 491802 493136 . - . ID=Thaps9463;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBE3];external_name=Thaps9463;logic_name=jgi_thaps3 chr13 ensembl transcript 491802 493136 . - . ID=Thaps9463;Parent=Thaps9463;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 491802 493136 . - 0 ID=Thaps9463;Parent=Thaps9463;rank=1 chr13 . exon 491802 493136 . - . ID=Thaps9463.1;Parent=Thaps9463;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 495477 496199 . + . ID=Thaps9465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBE5];external_name=Thaps9465;logic_name=jgi_thaps3 chr13 ensembl transcript 495477 496199 . + . ID=Thaps9465;Parent=Thaps9465;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 495477 496199 . + 0 ID=Thaps9465;Parent=Thaps9465;rank=1 chr13 . exon 495477 496199 . + . ID=Thaps9465.1;Parent=Thaps9465;constitutive=1;rank=1 chr13 . repeat_region 505326 505362 . ? . description=trf chr13 . repeat_region 505326 505362 . ? . description=dust chr13 ensembl protein_coding_gene 497835 498481 . + . ID=Thaps264007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBE7];external_name=Thaps264007;logic_name=jgi_thaps3 chr13 ensembl transcript 497835 498481 . + . ID=Thaps264007;Parent=Thaps264007;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 497835 498062 . + 0 ID=Thaps264007;Parent=Thaps264007;rank=1 chr13 . exon 497835 498062 . + . ID=Thaps264007.1;Parent=Thaps264007;constitutive=1;rank=1 chr13 . CDS 498102 498481 . + 0 ID=Thaps264007;Parent=Thaps264007;rank=2 chr13 . exon 498102 498481 . + . ID=Thaps264007.2;Parent=Thaps264007;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl gene 500091 500791 . + . ID=Thaps264008;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr13 ensembl transcript 500091 500791 . + . ID=Thaps264008;Parent=Thaps264008;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr13 . exon 500091 500164 . + . ID=Thaps264008.1;Parent=Thaps264008;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . exon 500241 500348 . + . ID=Thaps264008.2;Parent=Thaps264008;constitutive=1;rank=2 chr13 . exon 500380 500548 . + . ID=Thaps264008.3;Parent=Thaps264008;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . exon 500599 500791 . + . ID=Thaps264008.4;Parent=Thaps264008;constitutive=1;ensembl_end_phase=1;rank=4 chr13 ensembl protein_coding_gene 501567 502508 . + . ID=Thaps26403;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBE8];external_name=Thaps26403;logic_name=jgi_thaps3 chr13 ensembl transcript 501567 502508 . + . ID=Thaps26403;Parent=Thaps26403;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 501567 501679 . + 0 ID=Thaps26403;Parent=Thaps26403;rank=1 chr13 . exon 501567 501679 . + . ID=Thaps26403.1;Parent=Thaps26403;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 501785 502508 . + 0 ID=Thaps26403;Parent=Thaps26403;rank=2 chr13 . exon 501785 502508 . + . ID=Thaps26403.2;Parent=Thaps26403;constitutive=1;ensembl_end_phase=1;rank=2 chr13 ensembl protein_coding_gene 502551 504116 . + . ID=Thaps42226;biotype=protein_coding;description=Glutamyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CBE9];external_name=Thaps42226;logic_name=jgi_thaps3 chr13 ensembl transcript 502551 504116 . + . ID=Thaps42226;Parent=Thaps42226;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 502551 504116 . + 0 ID=Thaps42226;Parent=Thaps42226;rank=1 chr13 . exon 502551 504116 . + . ID=Thaps42226.1;Parent=Thaps42226;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 496546 497199 . - . ID=Thaps9466;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBE6];external_name=Thaps9466;logic_name=jgi_thaps3 chr13 ensembl transcript 496546 497199 . - . ID=Thaps9466;Parent=Thaps9466;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 496546 497199 . - 0 ID=Thaps9466;Parent=Thaps9466;rank=1 chr13 . exon 496546 497199 . - . ID=Thaps9466.1;Parent=Thaps9466;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 504259 505122 . - . ID=Thaps9471;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF0];external_name=Thaps9471;logic_name=jgi_thaps3 chr13 ensembl transcript 504259 505122 . - . ID=Thaps9471;Parent=Thaps9471;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 504259 504603 . - 0 ID=Thaps9471;Parent=Thaps9471;rank=2 chr13 . exon 504259 504603 . - . ID=Thaps9471.2;Parent=Thaps9471;constitutive=1;rank=2 chr13 . CDS 504715 505122 . - 0 ID=Thaps9471;Parent=Thaps9471;rank=1 chr13 . exon 504715 505122 . - . ID=Thaps9471.1;Parent=Thaps9471;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 505460 505994 . + . ID=Thaps9472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF1];external_name=Thaps9472;logic_name=jgi_thaps3 chr13 ensembl transcript 505460 505994 . + . ID=Thaps9472;Parent=Thaps9472;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 505460 505906 . + 0 ID=Thaps9472;Parent=Thaps9472;rank=1 chr13 . exon 505460 505906 . + . ID=Thaps9472.1;Parent=Thaps9472;constitutive=1;rank=1 chr13 . CDS 505974 505994 . + 0 ID=Thaps9472;Parent=Thaps9472;rank=2 chr13 . exon 505974 505994 . + . ID=Thaps9472.2;Parent=Thaps9472;constitutive=1;rank=2 chr13 . repeat_region 515189 518954 . + . description=Harbinger4_TP chr13 ensembl protein_coding_gene 507420 510593 . - . ID=Thaps24665;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF2];external_name=Thaps24665;logic_name=jgi_thaps3 chr13 ensembl transcript 507420 510593 . - . ID=Thaps24665;Parent=Thaps24665;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 507420 510593 . - 0 ID=Thaps24665;Parent=Thaps24665;rank=1 chr13 . exon 507420 510593 . - . ID=Thaps24665.1;Parent=Thaps24665;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 511171 512312 . + . ID=Thaps24666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF3];external_name=Thaps24666;logic_name=jgi_thaps3 chr13 ensembl transcript 511171 512312 . + . ID=Thaps24666;Parent=Thaps24666;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 511171 511276 . + 0 ID=Thaps24666;Parent=Thaps24666;rank=1 chr13 . exon 511171 511276 . + . ID=Thaps24666.1;Parent=Thaps24666;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 511364 512259 . + 0 ID=Thaps24666;Parent=Thaps24666;rank=2 chr13 . exon 511364 512259 . + . ID=Thaps24666.2;Parent=Thaps24666;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 512280 512312 . + 0 ID=Thaps24666;Parent=Thaps24666;rank=3 chr13 . exon 512280 512312 . + . ID=Thaps24666.3;Parent=Thaps24666;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 512733 513518 . + . ID=Thaps9475;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF4];external_name=Thaps9475;logic_name=jgi_thaps3 chr13 ensembl transcript 512733 513518 . + . ID=Thaps9475;Parent=Thaps9475;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 512733 513518 . + 0 ID=Thaps9475;Parent=Thaps9475;rank=1 chr13 . exon 512733 513518 . + . ID=Thaps9475.1;Parent=Thaps9475;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 513726 514958 . - . ID=Thaps9476;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF5];external_name=Thaps9476;logic_name=jgi_thaps3 chr13 ensembl transcript 513726 514958 . - . ID=Thaps9476;Parent=Thaps9476;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 513726 514958 . - 0 ID=Thaps9476;Parent=Thaps9476;rank=1 chr13 . exon 513726 514958 . - . ID=Thaps9476.1;Parent=Thaps9476;constitutive=1;rank=1 chr13 . repeat_region 517052 517073 . ? . description=trf chr13 . repeat_region 517052 517073 . ? . description=dust chr13 . repeat_region 517239 517281 . ? . description=trf chr13 . repeat_region 517386 517404 . ? . description=dust chr13 . repeat_region 518777 518784 . ? . description=dust chr13 . repeat_region 518976 518993 . ? . description=dust chr13 . repeat_region 522419 522450 . ? . description=trf chr13 . repeat_region 522419 522450 . ? . description=dust chr13 ensembl protein_coding_gene 521104 521868 . + . ID=Thaps264010;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF7];external_name=Thaps264010;logic_name=jgi_thaps3 chr13 ensembl transcript 521104 521868 . + . ID=Thaps264010;Parent=Thaps264010;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 521104 521688 . + 0 ID=Thaps264010;Parent=Thaps264010;rank=1 chr13 . exon 521104 521688 . + . ID=Thaps264010.1;Parent=Thaps264010;constitutive=1;rank=1 chr13 . CDS 521707 521868 . + 0 ID=Thaps264010;Parent=Thaps264010;rank=2 chr13 . exon 521707 521868 . + . ID=Thaps264010.2;Parent=Thaps264010;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 525645 526966 . + . ID=Thaps37041;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF9];external_name=Thaps37041;logic_name=jgi_thaps3 chr13 ensembl transcript 525645 526966 . + . ID=Thaps37041;Parent=Thaps37041;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 525645 526473 . + 0 ID=Thaps37041;Parent=Thaps37041;rank=1 chr13 . exon 525645 526473 . + . ID=Thaps37041.1;Parent=Thaps37041;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 526563 526966 . + 0 ID=Thaps37041;Parent=Thaps37041;rank=2 chr13 ensembl protein_coding_gene 519447 519931 . + . ID=Thaps9477;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF6];external_name=Thaps9477;logic_name=jgi_thaps3 chr13 ensembl transcript 519447 519931 . + . ID=Thaps9477;Parent=Thaps9477;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 519447 519587 . + 0 ID=Thaps9477;Parent=Thaps9477;rank=1 chr13 . exon 519447 519587 . + . ID=Thaps9477.1;Parent=Thaps9477;constitutive=1;rank=1 chr13 . CDS 519668 519931 . + 0 ID=Thaps9477;Parent=Thaps9477;rank=2 chr13 . exon 519668 519931 . + . ID=Thaps9477.2;Parent=Thaps9477;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 523342 524961 . - . ID=Thaps9479;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBF8];external_name=Thaps9479;logic_name=jgi_thaps3 chr13 ensembl transcript 523342 524961 . - . ID=Thaps9479;Parent=Thaps9479;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 523342 524961 . - 0 ID=Thaps9479;Parent=Thaps9479;rank=1 chr13 . exon 523342 524961 . - . ID=Thaps9479.1;Parent=Thaps9479;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 529921 530376 . - . ID=Thaps24668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG0];external_name=Thaps24668;logic_name=jgi_thaps3 chr13 ensembl transcript 529921 530376 . - . ID=Thaps24668;Parent=Thaps24668;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 529921 530376 . - 0 ID=Thaps24668;Parent=Thaps24668;rank=1 chr13 . exon 529921 530376 . - . ID=Thaps24668.1;Parent=Thaps24668;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 534552 535383 . - . ID=Thaps24669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG3];external_name=Thaps24669;logic_name=jgi_thaps3 chr13 ensembl transcript 534552 535383 . - . ID=Thaps24669;Parent=Thaps24669;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 534552 535153 . - 0 ID=Thaps24669;Parent=Thaps24669;rank=2 chr13 . exon 534552 535153 . - . ID=Thaps24669.2;Parent=Thaps24669;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 535239 535383 . - 0 ID=Thaps24669;Parent=Thaps24669;rank=1 chr13 . exon 535239 535383 . - . ID=Thaps24669.1;Parent=Thaps24669;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 530688 533017 . - . ID=Thaps264013;biotype=protein_coding;description=Monogalactosyldiacylglycerol synthase i a-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG1];external_name=Thaps264013;logic_name=jgi_thaps3 chr13 ensembl transcript 530688 533017 . - . ID=Thaps264013;Parent=Thaps264013;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 530688 530994 . - 0 ID=Thaps264013;Parent=Thaps264013;rank=7 chr13 . exon 530688 530994 . - . ID=Thaps264013.7;Parent=Thaps264013;constitutive=1;ensembl_end_phase=1;rank=7 chr13 . CDS 531078 531174 . - 0 ID=Thaps264013;Parent=Thaps264013;rank=6 chr13 . exon 531078 531174 . - . ID=Thaps264013.6;Parent=Thaps264013;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . CDS 531322 531560 . - 0 ID=Thaps264013;Parent=Thaps264013;rank=5 chr13 . exon 531322 531560 . - . ID=Thaps264013.5;Parent=Thaps264013;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 531654 531811 . - 0 ID=Thaps264013;Parent=Thaps264013;rank=4 chr13 . exon 531654 531811 . - . ID=Thaps264013.4;Parent=Thaps264013;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 531911 532180 . - 0 ID=Thaps264013;Parent=Thaps264013;rank=3 chr13 . exon 531911 532180 . - . ID=Thaps264013.3;Parent=Thaps264013;constitutive=1;rank=3 chr13 . CDS 532289 532365 . - 0 ID=Thaps264013;Parent=Thaps264013;rank=2 chr13 . exon 532289 532365 . - . ID=Thaps264013.2;Parent=Thaps264013;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 532463 533017 . - 0 ID=Thaps264013;Parent=Thaps264013;rank=1 chr13 . exon 532463 533017 . - . ID=Thaps264013.1;Parent=Thaps264013;constitutive=1;rank=1 chr13 . exon 526563 526966 . + . ID=Thaps37041.2;Parent=Thaps37041;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 533752 534213 . + . ID=Thaps9483;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG2];external_name=Thaps9483;logic_name=jgi_thaps3 chr13 ensembl transcript 533752 534213 . + . ID=Thaps9483;Parent=Thaps9483;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 533752 534213 . + 0 ID=Thaps9483;Parent=Thaps9483;rank=1 chr13 . exon 533752 534213 . + . ID=Thaps9483.1;Parent=Thaps9483;constitutive=1;rank=1 chr13 . repeat_region 543858 543873 . ? . description=dust chr13 ensembl protein_coding_gene 541295 544476 . + . ID=Thaps24671;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG6];external_name=Thaps24671;logic_name=jgi_thaps3 chr13 ensembl transcript 541295 544476 . + . ID=Thaps24671;Parent=Thaps24671;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 541295 543134 . + 0 ID=Thaps24671;Parent=Thaps24671;rank=1 chr13 . exon 541295 543134 . + . ID=Thaps24671.1;Parent=Thaps24671;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 543159 543699 . + 0 ID=Thaps24671;Parent=Thaps24671;rank=2 chr13 . exon 543159 543699 . + . ID=Thaps24671.2;Parent=Thaps24671;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 543858 544476 . + 0 ID=Thaps24671;Parent=Thaps24671;rank=3 chr13 . exon 543858 544476 . + . ID=Thaps24671.3;Parent=Thaps24671;constitutive=1;ensembl_end_phase=1;rank=3 chr13 ensembl protein_coding_gene 540237 540659 . - . ID=Thaps26022;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG5];external_name=Thaps26022;logic_name=jgi_thaps3 chr13 ensembl transcript 540237 540659 . - . ID=Thaps26022;Parent=Thaps26022;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 540237 540659 . - 0 ID=Thaps26022;Parent=Thaps26022;rank=1 chr13 . exon 540237 540659 . - . ID=Thaps26022.1;Parent=Thaps26022;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 544557 546185 . - . ID=Thaps29850;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG7];external_name=Thaps29850;logic_name=jgi_thaps3 chr13 ensembl transcript 544557 546185 . - . ID=Thaps29850;Parent=Thaps29850;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 544557 545940 . - 0 ID=Thaps29850;Parent=Thaps29850;rank=2 chr13 . exon 544557 545940 . - . ID=Thaps29850.2;Parent=Thaps29850;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 546070 546185 . - 0 ID=Thaps29850;Parent=Thaps29850;rank=1 chr13 ensembl protein_coding_gene 536243 538696 . - . ID=Thaps9485;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG4];external_name=Thaps9485;logic_name=jgi_thaps3 chr13 ensembl transcript 536243 538696 . - . ID=Thaps9485;Parent=Thaps9485;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 536243 536594 . - 0 ID=Thaps9485;Parent=Thaps9485;rank=4 chr13 . exon 536243 536594 . - . ID=Thaps9485.4;Parent=Thaps9485;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 536685 537478 . - 0 ID=Thaps9485;Parent=Thaps9485;rank=3 chr13 . exon 536685 537478 . - . ID=Thaps9485.3;Parent=Thaps9485;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 537556 538367 . - 0 ID=Thaps9485;Parent=Thaps9485;rank=2 chr13 . exon 537556 538367 . - . ID=Thaps9485.2;Parent=Thaps9485;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 538537 538696 . - 0 ID=Thaps9485;Parent=Thaps9485;rank=1 chr13 . exon 538537 538696 . - . ID=Thaps9485.1;Parent=Thaps9485;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . repeat_region 552495 552522 . ? . description=trf chr13 . repeat_region 553098 553125 . ? . description=trf chr13 . exon 546070 546185 . - . ID=Thaps29850.1;Parent=Thaps29850;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 546863 547870 . + . ID=Thaps9489;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG8];external_name=Thaps9489;logic_name=jgi_thaps3 chr13 ensembl transcript 546863 547870 . + . ID=Thaps9489;Parent=Thaps9489;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 546863 547475 . + 0 ID=Thaps9489;Parent=Thaps9489;rank=1 chr13 . exon 546863 547475 . + . ID=Thaps9489.1;Parent=Thaps9489;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 547605 547870 . + 0 ID=Thaps9489;Parent=Thaps9489;rank=2 chr13 . exon 547605 547870 . + . ID=Thaps9489.2;Parent=Thaps9489;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 547933 548967 . - . ID=Thaps9490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBG9];external_name=Thaps9490;logic_name=jgi_thaps3 chr13 ensembl transcript 547933 548967 . - . ID=Thaps9490;Parent=Thaps9490;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 547933 548967 . - 0 ID=Thaps9490;Parent=Thaps9490;rank=1 chr13 . exon 547933 548967 . - . ID=Thaps9490.1;Parent=Thaps9490;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 553795 557205 . + . ID=Thaps9491;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBH0];external_name=Thaps9491;logic_name=jgi_thaps3 chr13 ensembl transcript 553795 557205 . + . ID=Thaps9491;Parent=Thaps9491;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 553795 557205 . + 0 ID=Thaps9491;Parent=Thaps9491;rank=1 chr13 . exon 553795 557205 . + . ID=Thaps9491.1;Parent=Thaps9491;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 557381 560555 . - . ID=Thaps264016;biotype=protein_coding;description=Calcium transporting rt-atpase [Source:UniProtKB/TrEMBL%3BAcc:B8CBH1];external_name=Thaps264016;logic_name=jgi_thaps3 chr13 ensembl transcript 557381 560555 . - . ID=Thaps264016;Parent=Thaps264016;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 557381 557580 . - 0 ID=Thaps264016;Parent=Thaps264016;rank=7 chr13 . exon 557381 557580 . - . ID=Thaps264016.7;Parent=Thaps264016;constitutive=1;ensembl_end_phase=2;rank=7 chr13 . CDS 557672 557762 . - 0 ID=Thaps264016;Parent=Thaps264016;rank=6 chr13 . exon 557672 557762 . - . ID=Thaps264016.6;Parent=Thaps264016;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . CDS 557802 558348 . - 0 ID=Thaps264016;Parent=Thaps264016;rank=5 chr13 . exon 557802 558348 . - . ID=Thaps264016.5;Parent=Thaps264016;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . CDS 558385 558827 . - 0 ID=Thaps264016;Parent=Thaps264016;rank=4 chr13 . exon 558385 558827 . - . ID=Thaps264016.4;Parent=Thaps264016;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 558846 559356 . - 0 ID=Thaps264016;Parent=Thaps264016;rank=3 chr13 . exon 558846 559356 . - . ID=Thaps264016.3;Parent=Thaps264016;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 559387 559447 . - 0 ID=Thaps264016;Parent=Thaps264016;rank=2 chr13 . exon 559387 559447 . - . ID=Thaps264016.2;Parent=Thaps264016;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 559538 560555 . - 0 ID=Thaps264016;Parent=Thaps264016;rank=1 chr13 . exon 559538 560555 . - . ID=Thaps264016.1;Parent=Thaps264016;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 562760 563953 . + . ID=Thaps264018;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBH2];external_name=Thaps264018;logic_name=jgi_thaps3 chr13 ensembl transcript 562760 563953 . + . ID=Thaps264018;Parent=Thaps264018;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 562760 563290 . + 0 ID=Thaps264018;Parent=Thaps264018;rank=1 chr13 . exon 562760 563290 . + . ID=Thaps264018.1;Parent=Thaps264018;constitutive=1;rank=1 chr13 . CDS 563336 563535 . + 0 ID=Thaps264018;Parent=Thaps264018;rank=2 chr13 . exon 563336 563535 . + . ID=Thaps264018.2;Parent=Thaps264018;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 563630 563953 . + 0 ID=Thaps264018;Parent=Thaps264018;rank=3 chr13 . exon 563630 563953 . + . ID=Thaps264018.3;Parent=Thaps264018;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 564340 566451 . + . ID=Thaps9494;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBH3];external_name=Thaps9494;logic_name=jgi_thaps3 chr13 ensembl transcript 564340 566451 . + . ID=Thaps9494;Parent=Thaps9494;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 564340 564572 . + 0 ID=Thaps9494;Parent=Thaps9494;rank=1 chr13 . exon 564340 564572 . + . ID=Thaps9494.1;Parent=Thaps9494;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 564662 564746 . + 0 ID=Thaps9494;Parent=Thaps9494;rank=2 chr13 . exon 564662 564746 . + . ID=Thaps9494.2;Parent=Thaps9494;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 564838 565127 . + 0 ID=Thaps9494;Parent=Thaps9494;rank=3 chr13 . exon 564838 565127 . + . ID=Thaps9494.3;Parent=Thaps9494;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 565211 565350 . + 0 ID=Thaps9494;Parent=Thaps9494;rank=4 chr13 . exon 565211 565350 . + . ID=Thaps9494.4;Parent=Thaps9494;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 565436 566451 . + 0 ID=Thaps9494;Parent=Thaps9494;rank=5 chr13 . exon 565436 566451 . + . ID=Thaps9494.5;Parent=Thaps9494;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . repeat_region 567708 567729 . ? . description=trf chr13 . repeat_region 573564 573611 . ? . description=trf chr13 ensembl protein_coding_gene 571201 572524 . + . ID=Thaps37231;biotype=protein_coding;description=Ubiquitin protein ligase [Source:UniProtKB/TrEMBL%3BAcc:B8CBH5];external_name=Thaps37231;logic_name=jgi_thaps3 chr13 ensembl transcript 571201 572524 . + . ID=Thaps37231;Parent=Thaps37231;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 571201 572020 . + 0 ID=Thaps37231;Parent=Thaps37231;rank=1 chr13 . exon 571201 572020 . + . ID=Thaps37231.1;Parent=Thaps37231;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 572094 572175 . + 0 ID=Thaps37231;Parent=Thaps37231;rank=2 chr13 . exon 572094 572175 . + . ID=Thaps37231.2;Parent=Thaps37231;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 572395 572524 . + 0 ID=Thaps37231;Parent=Thaps37231;rank=3 chr13 . exon 572395 572524 . + . ID=Thaps37231.3;Parent=Thaps37231;constitutive=1;ensembl_end_phase=1;rank=3 chr13 ensembl protein_coding_gene 566621 568756 . - . ID=Thaps9495;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBH4];external_name=Thaps9495;logic_name=jgi_thaps3 chr13 ensembl transcript 566621 568756 . - . ID=Thaps9495;Parent=Thaps9495;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 566621 568756 . - 0 ID=Thaps9495;Parent=Thaps9495;rank=1 chr13 . exon 566621 568756 . - . ID=Thaps9495.1;Parent=Thaps9495;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 572693 574024 . - . ID=Thaps9497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBH6];external_name=Thaps9497;logic_name=jgi_thaps3 chr13 ensembl transcript 572693 574024 . - . ID=Thaps9497;Parent=Thaps9497;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 572693 574024 . - 0 ID=Thaps9497;Parent=Thaps9497;rank=1 chr13 . exon 572693 574024 . - . ID=Thaps9497.1;Parent=Thaps9497;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 574598 575700 . - . ID=Thaps9498;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBH7];external_name=Thaps9498;logic_name=jgi_thaps3 chr13 ensembl transcript 574598 575700 . - . ID=Thaps9498;Parent=Thaps9498;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 574598 575102 . - 0 ID=Thaps9498;Parent=Thaps9498;rank=2 chr13 . exon 574598 575102 . - . ID=Thaps9498.2;Parent=Thaps9498;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 575237 575700 . - 0 ID=Thaps9498;Parent=Thaps9498;rank=1 chr13 . exon 575237 575700 . - . ID=Thaps9498.1;Parent=Thaps9498;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . repeat_region 584223 584230 . ? . description=dust chr13 . repeat_region 584923 584941 . ? . description=dust chr13 ensembl protein_coding_gene 579594 580499 . + . ID=Thaps728;biotype=protein_coding;description=Long chain fatty acid elongase [Source:UniProtKB/TrEMBL%3BAcc:B8CBI0];external_name=ELO3;logic_name=jgi_thaps3 chr13 ensembl transcript 579594 580499 . + . ID=Thaps728;Parent=Thaps728;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 579594 580499 . + 0 ID=Thaps728;Parent=Thaps728;rank=1 chr13 . exon 579594 580499 . + . ID=Thaps728.1;Parent=Thaps728;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 576079 577682 . + . ID=Thaps9499;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBH8];external_name=Thaps9499;logic_name=jgi_thaps3 chr13 ensembl transcript 576079 577682 . + . ID=Thaps9499;Parent=Thaps9499;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 576079 576330 . + 0 ID=Thaps9499;Parent=Thaps9499;rank=1 chr13 . exon 576079 576330 . + . ID=Thaps9499.1;Parent=Thaps9499;constitutive=1;rank=1 chr13 . CDS 576375 577682 . + 0 ID=Thaps9499;Parent=Thaps9499;rank=2 chr13 . exon 576375 577682 . + . ID=Thaps9499.2;Parent=Thaps9499;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 577804 579213 . - . ID=Thaps9500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBH9];external_name=Thaps9500;logic_name=jgi_thaps3 chr13 ensembl transcript 577804 579213 . - . ID=Thaps9500;Parent=Thaps9500;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 577804 579213 . - 0 ID=Thaps9500;Parent=Thaps9500;rank=1 chr13 . exon 577804 579213 . - . ID=Thaps9500.1;Parent=Thaps9500;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 580926 584246 . - . ID=Thaps9502;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBI1];external_name=Thaps9502;logic_name=jgi_thaps3 chr13 ensembl transcript 580926 584246 . - . ID=Thaps9502;Parent=Thaps9502;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 580926 584246 . - 0 ID=Thaps9502;Parent=Thaps9502;rank=1 chr13 . exon 580926 584246 . - . ID=Thaps9502.1;Parent=Thaps9502;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 584638 587712 . + . ID=Thaps9503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBI2];external_name=Thaps9503;logic_name=jgi_thaps3 chr13 ensembl transcript 584638 587712 . + . ID=Thaps9503;Parent=Thaps9503;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 584638 586512 . + 0 ID=Thaps9503;Parent=Thaps9503;rank=1 chr13 . exon 584638 586512 . + . ID=Thaps9503.1;Parent=Thaps9503;constitutive=1;rank=1 chr13 . CDS 586592 586732 . + 0 ID=Thaps9503;Parent=Thaps9503;rank=2 chr13 . CDS 586820 587260 . + 0 ID=Thaps9503;Parent=Thaps9503;rank=3 chr13 . CDS 587344 587712 . + 0 ID=Thaps9503;Parent=Thaps9503;rank=4 chr13 . repeat_region 589540 589568 . ? . description=trf chr13 . repeat_region 590559 590578 . ? . description=trf chr13 ensembl protein_coding_gene 591042 592607 . + . ID=Thaps264023;biotype=protein_coding;description=RabGAP%2C TBC domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBI4];external_name=Thaps264023;logic_name=jgi_thaps3 chr13 ensembl transcript 591042 592607 . + . ID=Thaps264023;Parent=Thaps264023;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 591042 591361 . + 0 ID=Thaps264023;Parent=Thaps264023;rank=1 chr13 . exon 591042 591361 . + . ID=Thaps264023.1;Parent=Thaps264023;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 591548 591634 . + 0 ID=Thaps264023;Parent=Thaps264023;rank=2 chr13 . exon 591548 591634 . + . ID=Thaps264023.2;Parent=Thaps264023;constitutive=1;rank=2 chr13 . CDS 591798 591850 . + 0 ID=Thaps264023;Parent=Thaps264023;rank=3 chr13 . exon 591798 591850 . + . ID=Thaps264023.3;Parent=Thaps264023;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 592024 592607 . + 0 ID=Thaps264023;Parent=Thaps264023;rank=4 chr13 . exon 592024 592607 . + . ID=Thaps264023.4;Parent=Thaps264023;constitutive=1;ensembl_end_phase=2;rank=4 chr13 ensembl protein_coding_gene 587826 588548 . - . ID=Thaps269683;biotype=protein_coding;description=HSP70 domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBI3];external_name=Thaps269683;logic_name=jgi_thaps3 chr13 ensembl transcript 587826 588548 . - . ID=Thaps269683;Parent=Thaps269683;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 587826 588548 . - 0 ID=Thaps269683;Parent=Thaps269683;rank=1 chr13 . exon 587826 588548 . - . ID=Thaps269683.1;Parent=Thaps269683;constitutive=1;rank=1 chr13 . exon 586592 586732 . + . ID=Thaps9503.2;Parent=Thaps9503;constitutive=1;rank=2 chr13 . exon 586820 587260 . + . ID=Thaps9503.3;Parent=Thaps9503;constitutive=1;rank=3 chr13 . exon 587344 587712 . + . ID=Thaps9503.4;Parent=Thaps9503;constitutive=1;rank=4 chr13 ensembl protein_coding_gene 594333 598329 . + . ID=Thaps9506;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBI5];external_name=Thaps9506;logic_name=jgi_thaps3 chr13 ensembl transcript 594333 598329 . + . ID=Thaps9506;Parent=Thaps9506;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 594333 596108 . + 0 ID=Thaps9506;Parent=Thaps9506;rank=1 chr13 . exon 594333 596108 . + . ID=Thaps9506.1;Parent=Thaps9506;constitutive=1;rank=1 chr13 . CDS 596194 597156 . + 0 ID=Thaps9506;Parent=Thaps9506;rank=2 chr13 . CDS 597304 597357 . + 0 ID=Thaps9506;Parent=Thaps9506;rank=3 chr13 . CDS 597426 597557 . + 0 ID=Thaps9506;Parent=Thaps9506;rank=4 chr13 . CDS 597621 597767 . + 0 ID=Thaps9506;Parent=Thaps9506;rank=5 chr13 . CDS 597799 597961 . + 0 ID=Thaps9506;Parent=Thaps9506;rank=6 chr13 . CDS 598028 598329 . + 0 ID=Thaps9506;Parent=Thaps9506;rank=7 chr13 . repeat_region 601945 601952 . ? . description=dust chr13 ensembl protein_coding_gene 602884 607948 . - . ID=Thaps29861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBI7];external_name=Thaps29861;logic_name=jgi_thaps3 chr13 ensembl transcript 602884 607948 . - . ID=Thaps29861;Parent=Thaps29861;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 602884 604932 . - 0 ID=Thaps29861;Parent=Thaps29861;rank=6 chr13 . exon 602884 604932 . - . ID=Thaps29861.6;Parent=Thaps29861;constitutive=1;rank=6 chr13 . CDS 605010 605516 . - 0 ID=Thaps29861;Parent=Thaps29861;rank=5 chr13 . exon 605010 605516 . - . ID=Thaps29861.5;Parent=Thaps29861;constitutive=1;rank=5 chr13 . CDS 605597 605776 . - 0 ID=Thaps29861;Parent=Thaps29861;rank=4 chr13 . CDS 605865 607249 . - 0 ID=Thaps29861;Parent=Thaps29861;rank=3 chr13 . CDS 607349 607627 . - 0 ID=Thaps29861;Parent=Thaps29861;rank=2 chr13 . CDS 607786 607948 . - 0 ID=Thaps29861;Parent=Thaps29861;rank=1 chr13 ensembl protein_coding_gene 600014 600262 . - . ID=Thaps37158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBI6];external_name=Thaps37158;logic_name=jgi_thaps3 chr13 ensembl transcript 600014 600262 . - . ID=Thaps37158;Parent=Thaps37158;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 600014 600262 . - 0 ID=Thaps37158;Parent=Thaps37158;rank=1 chr13 . exon 600014 600262 . - . ID=Thaps37158.1;Parent=Thaps37158;constitutive=1;rank=1 chr13 . exon 596194 597156 . + . ID=Thaps9506.2;Parent=Thaps9506;constitutive=1;rank=2 chr13 . exon 597304 597357 . + . ID=Thaps9506.3;Parent=Thaps9506;constitutive=1;rank=3 chr13 . exon 597426 597557 . + . ID=Thaps9506.4;Parent=Thaps9506;constitutive=1;rank=4 chr13 . exon 597621 597767 . + . ID=Thaps9506.5;Parent=Thaps9506;constitutive=1;rank=5 chr13 . exon 597799 597961 . + . ID=Thaps9506.6;Parent=Thaps9506;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . exon 598028 598329 . + . ID=Thaps9506.7;Parent=Thaps9506;constitutive=1;ensembl_end_phase=2;rank=7 chr13 ensembl protein_coding_gene 608941 610593 . + . ID=Thaps24677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBI8];external_name=Thaps24677;logic_name=jgi_thaps3 chr13 ensembl transcript 608941 610593 . + . ID=Thaps24677;Parent=Thaps24677;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 608941 609300 . + 0 ID=Thaps24677;Parent=Thaps24677;rank=1 chr13 . exon 608941 609300 . + . ID=Thaps24677.1;Parent=Thaps24677;constitutive=1;rank=1 chr13 . CDS 609397 610593 . + 0 ID=Thaps24677;Parent=Thaps24677;rank=2 chr13 . exon 609397 610593 . + . ID=Thaps24677.2;Parent=Thaps24677;constitutive=1;rank=2 chr13 . exon 605597 605776 . - . ID=Thaps29861.4;Parent=Thaps29861;constitutive=1;rank=4 chr13 . exon 605865 607249 . - . ID=Thaps29861.3;Parent=Thaps29861;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . exon 607349 607627 . - . ID=Thaps29861.2;Parent=Thaps29861;constitutive=1;rank=2 chr13 . exon 607786 607948 . - . ID=Thaps29861.1;Parent=Thaps29861;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 611272 611571 . + . ID=Thaps37118;biotype=protein_coding;description=Reductase of ferredoxin thioredoxin reductase [Source:UniProtKB/TrEMBL%3BAcc:B8CBI9];external_name=FTRB;logic_name=jgi_thaps3 chr13 ensembl transcript 611272 611571 . + . ID=Thaps37118;Parent=Thaps37118;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 611272 611571 . + 0 ID=Thaps37118;Parent=Thaps37118;rank=1 chr13 . exon 611272 611571 . + . ID=Thaps37118.1;Parent=Thaps37118;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 612115 613105 . - . ID=Thaps9511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ0];external_name=Thaps9511;logic_name=jgi_thaps3 chr13 ensembl transcript 612115 613105 . - . ID=Thaps9511;Parent=Thaps9511;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 612115 612540 . - 0 ID=Thaps9511;Parent=Thaps9511;rank=2 chr13 . exon 612115 612540 . - . ID=Thaps9511.2;Parent=Thaps9511;constitutive=1;rank=2 chr13 . CDS 612674 613105 . - 0 ID=Thaps9511;Parent=Thaps9511;rank=1 chr13 . exon 612674 613105 . - . ID=Thaps9511.1;Parent=Thaps9511;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 614222 615475 . - . ID=Thaps9512;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ1];external_name=Thaps9512;logic_name=jgi_thaps3 chr13 ensembl transcript 614222 615475 . - . ID=Thaps9512;Parent=Thaps9512;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 614222 614757 . - 0 ID=Thaps9512;Parent=Thaps9512;rank=3 chr13 . exon 614222 614757 . - . ID=Thaps9512.3;Parent=Thaps9512;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 614951 615026 . - 0 ID=Thaps9512;Parent=Thaps9512;rank=2 chr13 . exon 614951 615026 . - . ID=Thaps9512.2;Parent=Thaps9512;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 615122 615475 . - 0 ID=Thaps9512;Parent=Thaps9512;rank=1 chr13 . exon 615122 615475 . - . ID=Thaps9512.1;Parent=Thaps9512;constitutive=1;rank=1 chr13 . repeat_region 619733 619748 . ? . description=dust chr13 ensembl protein_coding_gene 620504 622672 . + . ID=Thaps24679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ5];external_name=Thaps24679;logic_name=jgi_thaps3 chr13 ensembl transcript 620504 622672 . + . ID=Thaps24679;Parent=Thaps24679;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 620504 622672 . + 0 ID=Thaps24679;Parent=Thaps24679;rank=1 chr13 . exon 620504 622672 . + . ID=Thaps24679.1;Parent=Thaps24679;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 622699 625451 . - . ID=Thaps24680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ6];external_name=Thaps24680;logic_name=jgi_thaps3 chr13 ensembl transcript 622699 625451 . - . ID=Thaps24680;Parent=Thaps24680;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 622699 623139 . - 0 ID=Thaps24680;Parent=Thaps24680;rank=2 chr13 . exon 622699 623139 . - . ID=Thaps24680.2;Parent=Thaps24680;constitutive=1;rank=2 chr13 . CDS 623217 625451 . - 0 ID=Thaps24680;Parent=Thaps24680;rank=1 chr13 . exon 623217 625451 . - . ID=Thaps24680.1;Parent=Thaps24680;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 618837 619697 . - . ID=Thaps37240;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ4];external_name=Thaps37240;logic_name=jgi_thaps3 chr13 ensembl transcript 618837 619697 . - . ID=Thaps37240;Parent=Thaps37240;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 618837 618940 . - 0 ID=Thaps37240;Parent=Thaps37240;rank=2 chr13 . exon 618837 618940 . - . ID=Thaps37240.2;Parent=Thaps37240;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 619316 619697 . - 0 ID=Thaps37240;Parent=Thaps37240;rank=1 chr13 . exon 619316 619697 . - . ID=Thaps37240.1;Parent=Thaps37240;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 615823 616836 . + . ID=Thaps9513;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ2];external_name=Thaps9513;logic_name=jgi_thaps3 chr13 ensembl transcript 615823 616836 . + . ID=Thaps9513;Parent=Thaps9513;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 615823 616836 . + 0 ID=Thaps9513;Parent=Thaps9513;rank=1 chr13 . exon 615823 616836 . + . ID=Thaps9513.1;Parent=Thaps9513;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 617135 618070 . - . ID=Thaps9514;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ3];external_name=Thaps9514;logic_name=jgi_thaps3 chr13 ensembl transcript 617135 618070 . - . ID=Thaps9514;Parent=Thaps9514;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 617135 618070 . - 0 ID=Thaps9514;Parent=Thaps9514;rank=1 chr13 . exon 617135 618070 . - . ID=Thaps9514.1;Parent=Thaps9514;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 627978 628607 . + . ID=Thaps269690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ7];external_name=Thaps269690;logic_name=jgi_thaps3 chr13 ensembl transcript 627978 628607 . + . ID=Thaps269690;Parent=Thaps269690;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 627978 628607 . + 0 ID=Thaps269690;Parent=Thaps269690;rank=1 chr13 . exon 627978 628607 . + . ID=Thaps269690.1;Parent=Thaps269690;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 634942 635921 . + . ID=Thaps37116;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBK0];external_name=Thaps37116;logic_name=jgi_thaps3 chr13 ensembl transcript 634942 635921 . + . ID=Thaps37116;Parent=Thaps37116;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 634942 635031 . + 0 ID=Thaps37116;Parent=Thaps37116;rank=1 chr13 . exon 634942 635031 . + . ID=Thaps37116.1;Parent=Thaps37116;constitutive=1;rank=1 chr13 . CDS 635127 635921 . + 0 ID=Thaps37116;Parent=Thaps37116;rank=2 chr13 . exon 635127 635921 . + . ID=Thaps37116.2;Parent=Thaps37116;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 630970 632679 . + . ID=Thaps9519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ8];external_name=Thaps9519;logic_name=jgi_thaps3 chr13 ensembl transcript 630970 632679 . + . ID=Thaps9519;Parent=Thaps9519;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 630970 631410 . + 0 ID=Thaps9519;Parent=Thaps9519;rank=1 chr13 . exon 630970 631410 . + . ID=Thaps9519.1;Parent=Thaps9519;constitutive=1;rank=1 chr13 . CDS 631494 632474 . + 0 ID=Thaps9519;Parent=Thaps9519;rank=2 chr13 . exon 631494 632474 . + . ID=Thaps9519.2;Parent=Thaps9519;constitutive=1;rank=2 chr13 . CDS 632557 632679 . + 0 ID=Thaps9519;Parent=Thaps9519;rank=3 chr13 . exon 632557 632679 . + . ID=Thaps9519.3;Parent=Thaps9519;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 632733 634271 . - . ID=Thaps9520;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBJ9];external_name=Thaps9520;logic_name=jgi_thaps3 chr13 ensembl transcript 632733 634271 . - . ID=Thaps9520;Parent=Thaps9520;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 632733 634271 . - 0 ID=Thaps9520;Parent=Thaps9520;rank=1 chr13 . exon 632733 634271 . - . ID=Thaps9520.1;Parent=Thaps9520;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 637382 641597 . + . ID=Thaps24682;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBK2];external_name=Thaps24682;logic_name=jgi_thaps3 chr13 ensembl transcript 637382 641597 . + . ID=Thaps24682;Parent=Thaps24682;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 637382 637518 . + 0 ID=Thaps24682;Parent=Thaps24682;rank=1 chr13 . exon 637382 637518 . + . ID=Thaps24682.1;Parent=Thaps24682;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 637563 638510 . + 0 ID=Thaps24682;Parent=Thaps24682;rank=2 chr13 . exon 637563 638510 . + . ID=Thaps24682.2;Parent=Thaps24682;constitutive=1;rank=2 chr13 . CDS 638532 638640 . + 0 ID=Thaps24682;Parent=Thaps24682;rank=3 chr13 . exon 638532 638640 . + . ID=Thaps24682.3;Parent=Thaps24682;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 638938 639230 . + 0 ID=Thaps24682;Parent=Thaps24682;rank=4 chr13 . exon 638938 639230 . + . ID=Thaps24682.4;Parent=Thaps24682;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 639321 639875 . + 0 ID=Thaps24682;Parent=Thaps24682;rank=5 chr13 . exon 639321 639875 . + . ID=Thaps24682.5;Parent=Thaps24682;constitutive=1;rank=5 chr13 . CDS 639950 640018 . + 0 ID=Thaps24682;Parent=Thaps24682;rank=6 chr13 . exon 639950 640018 . + . ID=Thaps24682.6;Parent=Thaps24682;constitutive=1;rank=6 chr13 . CDS 640151 641597 . + 0 ID=Thaps24682;Parent=Thaps24682;rank=7 chr13 . exon 640151 641597 . + . ID=Thaps24682.7;Parent=Thaps24682;constitutive=1;ensembl_end_phase=1;rank=7 chr13 ensembl protein_coding_gene 641897 642190 . - . ID=Thaps37040;biotype=protein_coding;description=Anaphase promoting complex subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CBK3];external_name=Thaps37040;logic_name=jgi_thaps3 chr13 ensembl transcript 641897 642190 . - . ID=Thaps37040;Parent=Thaps37040;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 641897 642190 . - 0 ID=Thaps37040;Parent=Thaps37040;rank=1 chr13 . exon 641897 642190 . - . ID=Thaps37040.1;Parent=Thaps37040;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 636161 637204 . - . ID=Thaps9522;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBK1];external_name=Thaps9522;logic_name=jgi_thaps3 chr13 ensembl transcript 636161 637204 . - . ID=Thaps9522;Parent=Thaps9522;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 636161 637204 . - 0 ID=Thaps9522;Parent=Thaps9522;rank=1 chr13 . exon 636161 637204 . - . ID=Thaps9522.1;Parent=Thaps9522;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 642994 643935 . + . ID=Thaps9524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBK4];external_name=Thaps9524;logic_name=jgi_thaps3 chr13 ensembl transcript 642994 643935 . + . ID=Thaps9524;Parent=Thaps9524;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 642994 643935 . + 0 ID=Thaps9524;Parent=Thaps9524;rank=1 chr13 . exon 642994 643935 . + . ID=Thaps9524.1;Parent=Thaps9524;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 644593 648621 . + . ID=Thaps9525;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBK5];external_name=Thaps9525;logic_name=jgi_thaps3 chr13 ensembl transcript 644593 648621 . + . ID=Thaps9525;Parent=Thaps9525;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 644593 645016 . + 0 ID=Thaps9525;Parent=Thaps9525;rank=1 chr13 . exon 644593 645016 . + . ID=Thaps9525.1;Parent=Thaps9525;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 645171 645890 . + 0 ID=Thaps9525;Parent=Thaps9525;rank=2 chr13 . exon 645171 645890 . + . ID=Thaps9525.2;Parent=Thaps9525;constitutive=1;rank=2 chr13 . CDS 645976 647088 . + 0 ID=Thaps9525;Parent=Thaps9525;rank=3 chr13 . CDS 647174 648621 . + 0 ID=Thaps9525;Parent=Thaps9525;rank=4 chr13 ensembl protein_coding_gene 648785 654129 . - . ID=Thaps24683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBK6];external_name=Thaps24683;logic_name=jgi_thaps3 chr13 ensembl transcript 648785 654129 . - . ID=Thaps24683;Parent=Thaps24683;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 648785 649111 . - 0 ID=Thaps24683;Parent=Thaps24683;rank=2 chr13 . exon 648785 649111 . - . ID=Thaps24683.2;Parent=Thaps24683;constitutive=1;rank=2 chr13 . CDS 649198 654129 . - 0 ID=Thaps24683;Parent=Thaps24683;rank=1 chr13 . exon 649198 654129 . - . ID=Thaps24683.1;Parent=Thaps24683;constitutive=1;rank=1 chr13 . exon 645976 647088 . + . ID=Thaps9525.3;Parent=Thaps9525;constitutive=1;rank=3 chr13 . exon 647174 648621 . + . ID=Thaps9525.4;Parent=Thaps9525;constitutive=1;ensembl_end_phase=2;rank=4 chr13 ensembl protein_coding_gene 654921 656519 . + . ID=Thaps9527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBK7];external_name=Thaps9527;logic_name=jgi_thaps3 chr13 ensembl transcript 654921 656519 . + . ID=Thaps9527;Parent=Thaps9527;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 654921 656519 . + 0 ID=Thaps9527;Parent=Thaps9527;rank=1 chr13 . exon 654921 656519 . + . ID=Thaps9527.1;Parent=Thaps9527;constitutive=1;rank=1 chr13 . repeat_region 657710 657753 . ? . description=trf chr13 . repeat_region 657974 658014 . ? . description=trf chr13 ensembl protein_coding_gene 657144 660088 . + . ID=Thaps24684;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBK8];external_name=Thaps24684;logic_name=jgi_thaps3 chr13 ensembl transcript 657144 660088 . + . ID=Thaps24684;Parent=Thaps24684;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 657144 657741 . + 0 ID=Thaps24684;Parent=Thaps24684;rank=1 chr13 . exon 657144 657741 . + . ID=Thaps24684.1;Parent=Thaps24684;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 657975 658145 . + 0 ID=Thaps24684;Parent=Thaps24684;rank=2 chr13 . exon 657975 658145 . + . ID=Thaps24684.2;Parent=Thaps24684;constitutive=1;rank=2 chr13 . CDS 658185 658227 . + 0 ID=Thaps24684;Parent=Thaps24684;rank=3 chr13 . exon 658185 658227 . + . ID=Thaps24684.3;Parent=Thaps24684;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 658317 658393 . + 0 ID=Thaps24684;Parent=Thaps24684;rank=4 chr13 . exon 658317 658393 . + . ID=Thaps24684.4;Parent=Thaps24684;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 658575 659430 . + 0 ID=Thaps24684;Parent=Thaps24684;rank=5 chr13 . exon 658575 659430 . + . ID=Thaps24684.5;Parent=Thaps24684;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . CDS 659515 660088 . + 0 ID=Thaps24684;Parent=Thaps24684;rank=6 chr13 . exon 659515 660088 . + . ID=Thaps24684.6;Parent=Thaps24684;constitutive=1;ensembl_end_phase=1;rank=6 chr13 ensembl protein_coding_gene 664046 666528 . + . ID=Thaps24685;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBL1];external_name=Thaps24685;logic_name=jgi_thaps3 chr13 ensembl transcript 664046 666528 . + . ID=Thaps24685;Parent=Thaps24685;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 664046 665948 . + 0 ID=Thaps24685;Parent=Thaps24685;rank=1 chr13 . exon 664046 665948 . + . ID=Thaps24685.1;Parent=Thaps24685;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 666023 666528 . + 0 ID=Thaps24685;Parent=Thaps24685;rank=2 chr13 ensembl protein_coding_gene 662359 663247 . + . ID=Thaps264034;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBL0];external_name=Thaps264034;logic_name=jgi_thaps3 chr13 ensembl transcript 662359 663247 . + . ID=Thaps264034;Parent=Thaps264034;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 662359 662465 . + 0 ID=Thaps264034;Parent=Thaps264034;rank=1 chr13 . exon 662359 662465 . + . ID=Thaps264034.1;Parent=Thaps264034;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 662481 662497 . + 0 ID=Thaps264034;Parent=Thaps264034;rank=2 chr13 . exon 662481 662497 . + . ID=Thaps264034.2;Parent=Thaps264034;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 662597 662670 . + 0 ID=Thaps264034;Parent=Thaps264034;rank=3 chr13 . exon 662597 662670 . + . ID=Thaps264034.3;Parent=Thaps264034;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 662766 662898 . + 0 ID=Thaps264034;Parent=Thaps264034;rank=4 chr13 . exon 662766 662898 . + . ID=Thaps264034.4;Parent=Thaps264034;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 662938 663247 . + 0 ID=Thaps264034;Parent=Thaps264034;rank=5 chr13 . exon 662938 663247 . + . ID=Thaps264034.5;Parent=Thaps264034;constitutive=1;ensembl_end_phase=1;rank=5 chr13 ensembl protein_coding_gene 660197 661043 . - . ID=Thaps9529;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBK9];external_name=Thaps9529;logic_name=jgi_thaps3 chr13 ensembl transcript 660197 661043 . - . ID=Thaps9529;Parent=Thaps9529;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 660197 660639 . - 0 ID=Thaps9529;Parent=Thaps9529;rank=2 chr13 . exon 660197 660639 . - . ID=Thaps9529.2;Parent=Thaps9529;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 660839 661043 . - 0 ID=Thaps9529;Parent=Thaps9529;rank=1 chr13 . exon 660839 661043 . - . ID=Thaps9529.1;Parent=Thaps9529;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . exon 666023 666528 . + . ID=Thaps24685.2;Parent=Thaps24685;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 669188 671110 . + . ID=Thaps24686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBL3];external_name=Thaps24686;logic_name=jgi_thaps3 chr13 ensembl transcript 669188 671110 . + . ID=Thaps24686;Parent=Thaps24686;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 669188 671110 . + 0 ID=Thaps24686;Parent=Thaps24686;rank=1 chr13 . exon 669188 671110 . + . ID=Thaps24686.1;Parent=Thaps24686;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 666747 667577 . + . ID=Thaps9532;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBL2];external_name=Thaps9532;logic_name=jgi_thaps3 chr13 ensembl transcript 666747 667577 . + . ID=Thaps9532;Parent=Thaps9532;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 666747 667577 . + 0 ID=Thaps9532;Parent=Thaps9532;rank=1 chr13 . exon 666747 667577 . + . ID=Thaps9532.1;Parent=Thaps9532;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 671131 672636 . - . ID=Thaps9534;biotype=protein_coding;description=Folylpolyglutamate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CBL4];external_name=FGS1;logic_name=jgi_thaps3 chr13 ensembl transcript 671131 672636 . - . ID=Thaps9534;Parent=Thaps9534;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 671131 672447 . - 0 ID=Thaps9534;Parent=Thaps9534;rank=2 chr13 . exon 671131 672447 . - . ID=Thaps9534.2;Parent=Thaps9534;constitutive=1;rank=2 chr13 . CDS 672553 672636 . - 0 ID=Thaps9534;Parent=Thaps9534;rank=1 chr13 . exon 672553 672636 . - . ID=Thaps9534.1;Parent=Thaps9534;constitutive=1;rank=1 chr13 . repeat_region 675551 675560 . ? . description=dust chr13 . repeat_region 682810 682833 . ? . description=trf chr13 ensembl protein_coding_gene 675650 683424 . - . ID=Thaps24688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBL5];external_name=Thaps24688;logic_name=jgi_thaps3 chr13 ensembl transcript 675650 683424 . - . ID=Thaps24688;Parent=Thaps24688;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 675650 678103 . - 0 ID=Thaps24688;Parent=Thaps24688;rank=2 chr13 . exon 675650 678103 . - . ID=Thaps24688.2;Parent=Thaps24688;constitutive=1;rank=2 chr13 . CDS 678181 683424 . - 0 ID=Thaps24688;Parent=Thaps24688;rank=1 chr13 . exon 678181 683424 . - . ID=Thaps24688.1;Parent=Thaps24688;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 684496 685494 . + . ID=Thaps264036;biotype=protein_coding;description=Putative uncharacterized protein HSF18 [Source:UniProtKB/TrEMBL%3BAcc:B8CBL6];external_name=HSF18;logic_name=jgi_thaps3 chr13 ensembl transcript 684496 685494 . + . ID=Thaps264036;Parent=Thaps264036;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 684496 685494 . + 0 ID=Thaps264036;Parent=Thaps264036;rank=1 chr13 . exon 684496 685494 . + . ID=Thaps264036.1;Parent=Thaps264036;constitutive=1;rank=1 chr13 . biological_region 690757 690758 0.999 - . logic_name=eponine chr13 ensembl protein_coding_gene 686062 688295 . + . ID=Thaps24689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBL7];external_name=Thaps24689;logic_name=jgi_thaps3 chr13 ensembl transcript 686062 688295 . + . ID=Thaps24689;Parent=Thaps24689;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 686062 687725 . + 0 ID=Thaps24689;Parent=Thaps24689;rank=1 chr13 . exon 686062 687725 . + . ID=Thaps24689.1;Parent=Thaps24689;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 687905 688295 . + 0 ID=Thaps24689;Parent=Thaps24689;rank=2 chr13 . exon 687905 688295 . + . ID=Thaps24689.2;Parent=Thaps24689;constitutive=1;ensembl_end_phase=1;rank=2 chr13 ensembl protein_coding_gene 693566 695206 . - . ID=Thaps264039;biotype=protein_coding;description=Cytochrome P450 [Source:UniProtKB/TrEMBL%3BAcc:B8CBM0];external_name=CYP2;logic_name=jgi_thaps3 chr13 ensembl transcript 693566 695206 . - . ID=Thaps264039;Parent=Thaps264039;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 693566 695206 . - 0 ID=Thaps264039;Parent=Thaps264039;rank=1 chr13 . exon 693566 695206 . - . ID=Thaps264039.1;Parent=Thaps264039;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 690613 692821 . + . ID=Thaps29867;biotype=protein_coding;description=Long-chain-fatty-acid--CoA ligase [Source:UniProtKB/TrEMBL%3BAcc:B8CBL9];external_name=ACS2_1;logic_name=jgi_thaps3 chr13 ensembl transcript 690613 692821 . + . ID=Thaps29867;Parent=Thaps29867;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 690613 692005 . + 0 ID=Thaps29867;Parent=Thaps29867;rank=1 chr13 . exon 690613 692005 . + . ID=Thaps29867.1;Parent=Thaps29867;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 692102 692317 . + 0 ID=Thaps29867;Parent=Thaps29867;rank=2 chr13 . exon 692102 692317 . + . ID=Thaps29867.2;Parent=Thaps29867;constitutive=1;rank=2 chr13 . CDS 692406 692821 . + 0 ID=Thaps29867;Parent=Thaps29867;rank=3 chr13 . exon 692406 692821 . + . ID=Thaps29867.3;Parent=Thaps29867;constitutive=1;ensembl_end_phase=2;rank=3 chr13 ensembl protein_coding_gene 689613 689858 . - . ID=Thaps37097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBL8];external_name=Thaps37097;logic_name=jgi_thaps3 chr13 ensembl transcript 689613 689858 . - . ID=Thaps37097;Parent=Thaps37097;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 689613 689858 . - 0 ID=Thaps37097;Parent=Thaps37097;rank=1 chr13 . exon 689613 689858 . - . ID=Thaps37097.1;Parent=Thaps37097;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 695860 697591 . + . ID=Thaps24693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBM1];external_name=Thaps24693;logic_name=jgi_thaps3 chr13 ensembl transcript 695860 697591 . + . ID=Thaps24693;Parent=Thaps24693;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 695860 697549 . + 0 ID=Thaps24693;Parent=Thaps24693;rank=1 chr13 . exon 695860 697549 . + . ID=Thaps24693.1;Parent=Thaps24693;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 697581 697591 . + 0 ID=Thaps24693;Parent=Thaps24693;rank=2 chr13 . exon 697581 697591 . + . ID=Thaps24693.2;Parent=Thaps24693;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 699517 713257 . - . ID=Thaps24694;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBM3];external_name=Thaps24694;logic_name=jgi_thaps3 chr13 ensembl transcript 699517 713257 . - . ID=Thaps24694;Parent=Thaps24694;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 699517 700556 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=22 chr13 . exon 699517 700556 . - . ID=Thaps24694.22;Parent=Thaps24694;constitutive=1;ensembl_end_phase=2;rank=22 chr13 . CDS 700651 701271 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=21 chr13 . exon 700651 701271 . - . ID=Thaps24694.21;Parent=Thaps24694;constitutive=1;rank=21 chr13 . CDS 701359 702373 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=20 chr13 . exon 701359 702373 . - . ID=Thaps24694.20;Parent=Thaps24694;constitutive=1;ensembl_end_phase=1;rank=20 chr13 . CDS 702460 702542 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=19 chr13 . exon 702460 702542 . - . ID=Thaps24694.19;Parent=Thaps24694;constitutive=1;ensembl_end_phase=2;rank=19 chr13 . CDS 702629 703291 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=18 chr13 . exon 702629 703291 . - . ID=Thaps24694.18;Parent=Thaps24694;constitutive=1;rank=18 chr13 . CDS 703387 703706 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=17 chr13 . exon 703387 703706 . - . ID=Thaps24694.17;Parent=Thaps24694;constitutive=1;ensembl_end_phase=2;rank=17 chr13 . CDS 703828 704383 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=16 chr13 . exon 703828 704383 . - . ID=Thaps24694.16;Parent=Thaps24694;constitutive=1;ensembl_end_phase=1;rank=16 chr13 . CDS 704457 705480 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=15 chr13 . exon 704457 705480 . - . ID=Thaps24694.15;Parent=Thaps24694;constitutive=1;ensembl_end_phase=1;rank=15 chr13 . CDS 705571 705582 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=14 chr13 . CDS 705681 706557 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=13 chr13 . CDS 706639 707115 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=12 chr13 . CDS 707210 707270 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=11 chr13 . CDS 707355 707402 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=10 chr13 . CDS 707488 708468 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=9 chr13 . CDS 708546 708827 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=8 chr13 . CDS 709019 709245 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=7 chr13 . CDS 709339 709501 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=6 chr13 . CDS 709577 710037 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=5 chr13 . CDS 710073 711217 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=4 chr13 . CDS 711295 712068 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=3 chr13 . CDS 712154 712779 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=2 chr13 . CDS 712876 713257 . - 0 ID=Thaps24694;Parent=Thaps24694;rank=1 chr13 ensembl protein_coding_gene 697880 699112 . - . ID=Thaps9543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBM2];external_name=Thaps9543;logic_name=jgi_thaps3 chr13 ensembl transcript 697880 699112 . - . ID=Thaps9543;Parent=Thaps9543;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 697880 698274 . - 0 ID=Thaps9543;Parent=Thaps9543;rank=2 chr13 . exon 697880 698274 . - . ID=Thaps9543.2;Parent=Thaps9543;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 698338 699112 . - 0 ID=Thaps9543;Parent=Thaps9543;rank=1 chr13 . exon 698338 699112 . - . ID=Thaps9543.1;Parent=Thaps9543;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . repeat_region 712549 712556 . ? . description=dust chr13 . repeat_region 714272 714293 . ? . description=dust chr13 . exon 705571 705582 . - . ID=Thaps24694.14;Parent=Thaps24694;constitutive=1;rank=14 chr13 . exon 705681 706557 . - . ID=Thaps24694.13;Parent=Thaps24694;constitutive=1;ensembl_end_phase=1;rank=13 chr13 . exon 706639 707115 . - . ID=Thaps24694.12;Parent=Thaps24694;constitutive=1;rank=12 chr13 . exon 707210 707270 . - . ID=Thaps24694.11;Parent=Thaps24694;constitutive=1;ensembl_end_phase=1;rank=11 chr13 . exon 707355 707402 . - . ID=Thaps24694.10;Parent=Thaps24694;constitutive=1;rank=10 chr13 . exon 707488 708468 . - . ID=Thaps24694.9;Parent=Thaps24694;constitutive=1;rank=9 chr13 . exon 708546 708827 . - . ID=Thaps24694.8;Parent=Thaps24694;constitutive=1;rank=8 chr13 . exon 709019 709245 . - . ID=Thaps24694.7;Parent=Thaps24694;constitutive=1;ensembl_end_phase=2;rank=7 chr13 . exon 709339 709501 . - . ID=Thaps24694.6;Parent=Thaps24694;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . exon 709577 710037 . - . ID=Thaps24694.5;Parent=Thaps24694;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . exon 710073 711217 . - . ID=Thaps24694.4;Parent=Thaps24694;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . exon 711295 712068 . - . ID=Thaps24694.3;Parent=Thaps24694;constitutive=1;rank=3 chr13 . exon 712154 712779 . - . ID=Thaps24694.2;Parent=Thaps24694;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . exon 712876 713257 . - . ID=Thaps24694.1;Parent=Thaps24694;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 718107 718367 . - . ID=Thaps264043;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBM5];external_name=MYB15;logic_name=jgi_thaps3 chr13 ensembl transcript 718107 718367 . - . ID=Thaps264043;Parent=Thaps264043;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 718107 718367 . - 0 ID=Thaps264043;Parent=Thaps264043;rank=1 chr13 . exon 718107 718367 . - . ID=Thaps264043.1;Parent=Thaps264043;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 714946 716075 . + . ID=Thaps269696;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBM4];external_name=CUE5;logic_name=jgi_thaps3 chr13 ensembl transcript 714946 716075 . + . ID=Thaps269696;Parent=Thaps269696;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 714946 715464 . + 0 ID=Thaps269696;Parent=Thaps269696;rank=1 chr13 . exon 714946 715464 . + . ID=Thaps269696.1;Parent=Thaps269696;constitutive=1;rank=1 chr13 . CDS 715519 715533 . + 0 ID=Thaps269696;Parent=Thaps269696;rank=2 chr13 . exon 715519 715533 . + . ID=Thaps269696.2;Parent=Thaps269696;constitutive=1;rank=2 chr13 . CDS 715641 715748 . + 0 ID=Thaps269696;Parent=Thaps269696;rank=3 chr13 . exon 715641 715748 . + . ID=Thaps269696.3;Parent=Thaps269696;constitutive=1;rank=3 chr13 . CDS 715839 716075 . + 0 ID=Thaps269696;Parent=Thaps269696;rank=4 chr13 . exon 715839 716075 . + . ID=Thaps269696.4;Parent=Thaps269696;constitutive=1;rank=4 chr13 ensembl protein_coding_gene 727645 729310 . - . ID=Thaps37127;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBM6];external_name=Thaps37127;logic_name=jgi_thaps3 chr13 ensembl transcript 727645 729310 . - . ID=Thaps37127;Parent=Thaps37127;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 727645 727770 . - 0 ID=Thaps37127;Parent=Thaps37127;rank=3 chr13 . exon 727645 727770 . - . ID=Thaps37127.3;Parent=Thaps37127;constitutive=1;rank=3 chr13 . CDS 727862 728725 . - 0 ID=Thaps37127;Parent=Thaps37127;rank=2 chr13 . exon 727862 728725 . - . ID=Thaps37127.2;Parent=Thaps37127;constitutive=1;rank=2 chr13 . CDS 728783 729310 . - 0 ID=Thaps37127;Parent=Thaps37127;rank=1 chr13 . exon 728783 729310 . - . ID=Thaps37127.1;Parent=Thaps37127;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 730887 734315 . + . ID=Thaps9549;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBM7];external_name=Thaps9549;logic_name=jgi_thaps3 chr13 ensembl transcript 730887 734315 . + . ID=Thaps9549;Parent=Thaps9549;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 730887 731048 . + 0 ID=Thaps9549;Parent=Thaps9549;rank=1 chr13 . exon 730887 731048 . + . ID=Thaps9549.1;Parent=Thaps9549;constitutive=1;rank=1 chr13 . CDS 731159 733522 . + 0 ID=Thaps9549;Parent=Thaps9549;rank=2 chr13 . exon 731159 733522 . + . ID=Thaps9549.2;Parent=Thaps9549;constitutive=1;rank=2 chr13 . CDS 733617 734315 . + 0 ID=Thaps9549;Parent=Thaps9549;rank=3 chr13 . exon 733617 734315 . + . ID=Thaps9549.3;Parent=Thaps9549;constitutive=1;rank=3 chr13 . repeat_region 738079 738321 . ? . description=trf chr13 ensembl protein_coding_gene 734682 735810 . - . ID=Thaps269699;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBM8];external_name=Thaps269699;logic_name=jgi_thaps3 chr13 ensembl transcript 734682 735810 . - . ID=Thaps269699;Parent=Thaps269699;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 734682 734918 . - 0 ID=Thaps269699;Parent=Thaps269699;rank=4 chr13 . exon 734682 734918 . - . ID=Thaps269699.4;Parent=Thaps269699;constitutive=1;rank=4 chr13 . CDS 735008 735115 . - 0 ID=Thaps269699;Parent=Thaps269699;rank=3 chr13 . exon 735008 735115 . - . ID=Thaps269699.3;Parent=Thaps269699;constitutive=1;rank=3 chr13 . CDS 735223 735237 . - 0 ID=Thaps269699;Parent=Thaps269699;rank=2 chr13 . exon 735223 735237 . - . ID=Thaps269699.2;Parent=Thaps269699;constitutive=1;rank=2 chr13 . CDS 735292 735810 . - 0 ID=Thaps269699;Parent=Thaps269699;rank=1 chr13 . exon 735292 735810 . - . ID=Thaps269699.1;Parent=Thaps269699;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 737650 738737 . - . ID=Thaps9551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBM9];external_name=Thaps9551;logic_name=jgi_thaps3 chr13 ensembl transcript 737650 738737 . - . ID=Thaps9551;Parent=Thaps9551;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 737650 737795 . - 0 ID=Thaps9551;Parent=Thaps9551;rank=4 chr13 . exon 737650 737795 . - . ID=Thaps9551.4;Parent=Thaps9551;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 738062 738319 . - 0 ID=Thaps9551;Parent=Thaps9551;rank=3 chr13 . exon 738062 738319 . - . ID=Thaps9551.3;Parent=Thaps9551;constitutive=1;rank=3 chr13 . CDS 738387 738477 . - 0 ID=Thaps9551;Parent=Thaps9551;rank=2 chr13 . exon 738387 738477 . - . ID=Thaps9551.2;Parent=Thaps9551;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 738573 738737 . - 0 ID=Thaps9551;Parent=Thaps9551;rank=1 chr13 . exon 738573 738737 . - . ID=Thaps9551.1;Parent=Thaps9551;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 741316 745085 . + . ID=Thaps9552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN0];external_name=Thaps9552;logic_name=jgi_thaps3 chr13 ensembl transcript 741316 745085 . + . ID=Thaps9552;Parent=Thaps9552;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 741316 741423 . + 0 ID=Thaps9552;Parent=Thaps9552;rank=1 chr13 . exon 741316 741423 . + . ID=Thaps9552.1;Parent=Thaps9552;constitutive=1;rank=1 chr13 . CDS 741517 743037 . + 0 ID=Thaps9552;Parent=Thaps9552;rank=2 chr13 . exon 741517 743037 . + . ID=Thaps9552.2;Parent=Thaps9552;constitutive=1;rank=2 chr13 . CDS 743397 743652 . + 0 ID=Thaps9552;Parent=Thaps9552;rank=3 chr13 . exon 743397 743652 . + . ID=Thaps9552.3;Parent=Thaps9552;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 743967 744341 . + 0 ID=Thaps9552;Parent=Thaps9552;rank=4 chr13 . exon 743967 744341 . + . ID=Thaps9552.4;Parent=Thaps9552;constitutive=1;rank=4 chr13 . CDS 744374 744429 . + 0 ID=Thaps9552;Parent=Thaps9552;rank=5 chr13 . exon 744374 744429 . + . ID=Thaps9552.5;Parent=Thaps9552;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 744577 744747 . + 0 ID=Thaps9552;Parent=Thaps9552;rank=6 chr13 . CDS 744831 745085 . + 0 ID=Thaps9552;Parent=Thaps9552;rank=7 chr13 . repeat_region 744769 744776 . ? . description=dust chr13 . repeat_region 751643 751659 . ? . description=dust chr13 . repeat_region 753145 753158 . ? . description=dust chr13 ensembl protein_coding_gene 745502 748227 . + . ID=Thaps24698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN1];external_name=Thaps24698;logic_name=jgi_thaps3 chr13 ensembl transcript 745502 748227 . + . ID=Thaps24698;Parent=Thaps24698;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 745502 745732 . + 0 ID=Thaps24698;Parent=Thaps24698;rank=1 chr13 . exon 745502 745732 . + . ID=Thaps24698.1;Parent=Thaps24698;constitutive=1;rank=1 chr13 . CDS 745830 745974 . + 0 ID=Thaps24698;Parent=Thaps24698;rank=2 chr13 . exon 745830 745974 . + . ID=Thaps24698.2;Parent=Thaps24698;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 746061 746929 . + 0 ID=Thaps24698;Parent=Thaps24698;rank=3 chr13 . exon 746061 746929 . + . ID=Thaps24698.3;Parent=Thaps24698;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 747016 747617 . + 0 ID=Thaps24698;Parent=Thaps24698;rank=4 chr13 . exon 747016 747617 . + . ID=Thaps24698.4;Parent=Thaps24698;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 747708 748227 . + 0 ID=Thaps24698;Parent=Thaps24698;rank=5 chr13 . exon 747708 748227 . + . ID=Thaps24698.5;Parent=Thaps24698;constitutive=1;ensembl_end_phase=1;rank=5 chr13 ensembl protein_coding_gene 751517 752345 . + . ID=Thaps264048;biotype=protein_coding;description=Proline rich protein kinase like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN2];external_name=Thaps264048;logic_name=jgi_thaps3 chr13 ensembl transcript 751517 752345 . + . ID=Thaps264048;Parent=Thaps264048;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 751517 751625 . + 0 ID=Thaps264048;Parent=Thaps264048;rank=1 chr13 . exon 751517 751625 . + . ID=Thaps264048.1;Parent=Thaps264048;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 751705 751826 . + 0 ID=Thaps264048;Parent=Thaps264048;rank=2 chr13 . exon 751705 751826 . + . ID=Thaps264048.2;Parent=Thaps264048;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 752059 752345 . + 0 ID=Thaps264048;Parent=Thaps264048;rank=3 chr13 . exon 752059 752345 . + . ID=Thaps264048.3;Parent=Thaps264048;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . exon 744577 744747 . + . ID=Thaps9552.6;Parent=Thaps9552;constitutive=1;rank=6 chr13 . exon 744831 745085 . + . ID=Thaps9552.7;Parent=Thaps9552;constitutive=1;rank=7 chr13 ensembl protein_coding_gene 754080 755903 . - . ID=Thaps9555;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN3];external_name=Thaps9555;logic_name=jgi_thaps3 chr13 ensembl transcript 754080 755903 . - . ID=Thaps9555;Parent=Thaps9555;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 754080 754510 . - 0 ID=Thaps9555;Parent=Thaps9555;rank=4 chr13 . exon 754080 754510 . - . ID=Thaps9555.4;Parent=Thaps9555;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 754566 754709 . - 0 ID=Thaps9555;Parent=Thaps9555;rank=3 chr13 . CDS 754816 754830 . - 0 ID=Thaps9555;Parent=Thaps9555;rank=2 chr13 . CDS 754919 755903 . - 0 ID=Thaps9555;Parent=Thaps9555;rank=1 chr13 . repeat_region 755661 755687 . ? . description=trf chr13 . repeat_region 757812 757837 . ? . description=trf chr13 . repeat_region 759754 759828 . ? . description=trf chr13 ensembl protein_coding_gene 756480 757642 . + . ID=Thaps24699;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN4];external_name=Thaps24699;logic_name=jgi_thaps3 chr13 ensembl transcript 756480 757642 . + . ID=Thaps24699;Parent=Thaps24699;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 756480 757320 . + 0 ID=Thaps24699;Parent=Thaps24699;rank=1 chr13 . exon 756480 757320 . + . ID=Thaps24699.1;Parent=Thaps24699;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 757422 757642 . + 0 ID=Thaps24699;Parent=Thaps24699;rank=2 chr13 . exon 757422 757642 . + . ID=Thaps24699.2;Parent=Thaps24699;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . exon 754566 754709 . - . ID=Thaps9555.3;Parent=Thaps9555;constitutive=1;rank=3 chr13 . exon 754816 754830 . - . ID=Thaps9555.2;Parent=Thaps9555;constitutive=1;rank=2 chr13 . exon 754919 755903 . - . ID=Thaps9555.1;Parent=Thaps9555;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 758932 760865 . - . ID=Thaps9557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN5];external_name=Thaps9557;logic_name=jgi_thaps3 chr13 ensembl transcript 758932 760865 . - . ID=Thaps9557;Parent=Thaps9557;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 758932 759061 . - 0 ID=Thaps9557;Parent=Thaps9557;rank=9 chr13 . exon 758932 759061 . - . ID=Thaps9557.9;Parent=Thaps9557;constitutive=1;ensembl_end_phase=1;rank=9 chr13 . CDS 759163 759408 . - 0 ID=Thaps9557;Parent=Thaps9557;rank=8 chr13 . exon 759163 759408 . - . ID=Thaps9557.8;Parent=Thaps9557;constitutive=1;rank=8 chr13 . CDS 759525 759658 . - 0 ID=Thaps9557;Parent=Thaps9557;rank=7 chr13 . exon 759525 759658 . - . ID=Thaps9557.7;Parent=Thaps9557;constitutive=1;ensembl_end_phase=2;rank=7 chr13 . CDS 759754 759837 . - 0 ID=Thaps9557;Parent=Thaps9557;rank=6 chr13 . exon 759754 759837 . - . ID=Thaps9557.6;Parent=Thaps9557;constitutive=1;rank=6 chr13 . CDS 759953 760006 . - 0 ID=Thaps9557;Parent=Thaps9557;rank=5 chr13 . exon 759953 760006 . - . ID=Thaps9557.5;Parent=Thaps9557;constitutive=1;rank=5 chr13 . CDS 760093 760197 . - 0 ID=Thaps9557;Parent=Thaps9557;rank=4 chr13 . exon 760093 760197 . - . ID=Thaps9557.4;Parent=Thaps9557;constitutive=1;rank=4 chr13 . CDS 760340 760441 . - 0 ID=Thaps9557;Parent=Thaps9557;rank=3 chr13 . exon 760340 760441 . - . ID=Thaps9557.3;Parent=Thaps9557;constitutive=1;rank=3 chr13 . CDS 760535 760631 . - 0 ID=Thaps9557;Parent=Thaps9557;rank=2 chr13 . exon 760535 760631 . - . ID=Thaps9557.2;Parent=Thaps9557;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 760732 760865 . - 0 ID=Thaps9557;Parent=Thaps9557;rank=1 chr13 . exon 760732 760865 . - . ID=Thaps9557.1;Parent=Thaps9557;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 761465 763501 . + . ID=Thaps9558;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN6];external_name=Thaps9558;logic_name=jgi_thaps3 chr13 ensembl transcript 761465 763501 . + . ID=Thaps9558;Parent=Thaps9558;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 761465 761642 . + 0 ID=Thaps9558;Parent=Thaps9558;rank=1 chr13 . exon 761465 761642 . + . ID=Thaps9558.1;Parent=Thaps9558;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 761914 761993 . + 0 ID=Thaps9558;Parent=Thaps9558;rank=2 chr13 . exon 761914 761993 . + . ID=Thaps9558.2;Parent=Thaps9558;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 762080 762130 . + 0 ID=Thaps9558;Parent=Thaps9558;rank=3 chr13 . exon 762080 762130 . + . ID=Thaps9558.3;Parent=Thaps9558;constitutive=1;rank=3 chr13 . CDS 762233 762428 . + 0 ID=Thaps9558;Parent=Thaps9558;rank=4 chr13 . exon 762233 762428 . + . ID=Thaps9558.4;Parent=Thaps9558;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 762519 762568 . + 0 ID=Thaps9558;Parent=Thaps9558;rank=5 chr13 . exon 762519 762568 . + . ID=Thaps9558.5;Parent=Thaps9558;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 762914 763018 . + 0 ID=Thaps9558;Parent=Thaps9558;rank=6 chr13 . exon 762914 763018 . + . ID=Thaps9558.6;Parent=Thaps9558;constitutive=1;rank=6 chr13 . CDS 763112 763165 . + 0 ID=Thaps9558;Parent=Thaps9558;rank=7 chr13 . exon 763112 763165 . + . ID=Thaps9558.7;Parent=Thaps9558;constitutive=1;rank=7 chr13 . CDS 763364 763501 . + 0 ID=Thaps9558;Parent=Thaps9558;rank=8 chr13 . exon 763364 763501 . + . ID=Thaps9558.8;Parent=Thaps9558;constitutive=1;rank=8 chr13 . repeat_region 773256 773302 . ? . description=dust chr13 ensembl protein_coding_gene 773350 773985 . + . ID=Thaps17228;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN9];external_name=Thaps17228;logic_name=jgi_thaps3 chr13 ensembl transcript 773350 773985 . + . ID=Thaps17228;Parent=Thaps17228;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 773350 773985 . + 0 ID=Thaps17228;Parent=Thaps17228;rank=1 chr13 . exon 773350 773985 . + . ID=Thaps17228.1;Parent=Thaps17228;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 764743 765718 . + . ID=Thaps24700;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN7];external_name=Thaps24700;logic_name=jgi_thaps3 chr13 ensembl transcript 764743 765718 . + . ID=Thaps24700;Parent=Thaps24700;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 764743 765522 . + 0 ID=Thaps24700;Parent=Thaps24700;rank=1 chr13 . exon 764743 765522 . + . ID=Thaps24700.1;Parent=Thaps24700;constitutive=1;rank=1 chr13 . CDS 765602 765718 . + 0 ID=Thaps24700;Parent=Thaps24700;rank=2 chr13 . exon 765602 765718 . + . ID=Thaps24700.2;Parent=Thaps24700;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 770555 771870 . - . ID=Thaps37126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBN8];external_name=Thaps37126;logic_name=jgi_thaps3 chr13 ensembl transcript 770555 771870 . - . ID=Thaps37126;Parent=Thaps37126;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 770555 770883 . - 0 ID=Thaps37126;Parent=Thaps37126;rank=2 chr13 . exon 770555 770883 . - . ID=Thaps37126.2;Parent=Thaps37126;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 771630 771870 . - 0 ID=Thaps37126;Parent=Thaps37126;rank=1 chr13 . exon 771630 771870 . - . ID=Thaps37126.1;Parent=Thaps37126;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . repeat_region 778157 778185 . ? . description=trf chr13 ensembl protein_coding_gene 774947 778141 . - . ID=Thaps24702;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBP0];external_name=Thaps24702;logic_name=jgi_thaps3 chr13 ensembl transcript 774947 778141 . - . ID=Thaps24702;Parent=Thaps24702;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 774947 775269 . - 0 ID=Thaps24702;Parent=Thaps24702;rank=4 chr13 . exon 774947 775269 . - . ID=Thaps24702.4;Parent=Thaps24702;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 775323 776111 . - 0 ID=Thaps24702;Parent=Thaps24702;rank=3 chr13 . exon 775323 776111 . - . ID=Thaps24702.3;Parent=Thaps24702;constitutive=1;rank=3 chr13 . CDS 776279 776649 . - 0 ID=Thaps24702;Parent=Thaps24702;rank=2 chr13 . exon 776279 776649 . - . ID=Thaps24702.2;Parent=Thaps24702;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 776760 778141 . - 0 ID=Thaps24702;Parent=Thaps24702;rank=1 chr13 . exon 776760 778141 . - . ID=Thaps24702.1;Parent=Thaps24702;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 784153 788914 . + . ID=Thaps24704;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBP5];external_name=Thaps24704;logic_name=jgi_thaps3 chr13 ensembl transcript 784153 788914 . + . ID=Thaps24704;Parent=Thaps24704;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 784153 785623 . + 0 ID=Thaps24704;Parent=Thaps24704;rank=1 chr13 . exon 784153 785623 . + . ID=Thaps24704.1;Parent=Thaps24704;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 785664 787485 . + 0 ID=Thaps24704;Parent=Thaps24704;rank=2 chr13 . CDS 787600 787674 . + 0 ID=Thaps24704;Parent=Thaps24704;rank=3 chr13 . CDS 787717 787746 . + 0 ID=Thaps24704;Parent=Thaps24704;rank=4 chr13 . CDS 787946 788072 . + 0 ID=Thaps24704;Parent=Thaps24704;rank=5 chr13 . CDS 788153 788914 . + 0 ID=Thaps24704;Parent=Thaps24704;rank=6 chr13 ensembl protein_coding_gene 778963 779197 . + . ID=Thaps264051;biotype=protein_coding;description=Ubiquinol cytochrome c reductase [Source:UniProtKB/TrEMBL%3BAcc:B8CBP1];external_name=Thaps264051;logic_name=jgi_thaps3 chr13 ensembl transcript 778963 779197 . + . ID=Thaps264051;Parent=Thaps264051;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 778963 779197 . + 0 ID=Thaps264051;Parent=Thaps264051;rank=1 chr13 . exon 778963 779197 . + . ID=Thaps264051.1;Parent=Thaps264051;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 781893 782277 . - . ID=Thaps37098;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBP3];external_name=Thaps37098;logic_name=jgi_thaps3 chr13 ensembl transcript 781893 782277 . - . ID=Thaps37098;Parent=Thaps37098;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 781893 781986 . - 0 ID=Thaps37098;Parent=Thaps37098;rank=2 chr13 . exon 781893 781986 . - . ID=Thaps37098.2;Parent=Thaps37098;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 782126 782277 . - 0 ID=Thaps37098;Parent=Thaps37098;rank=1 chr13 . exon 782126 782277 . - . ID=Thaps37098.1;Parent=Thaps37098;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 783098 783517 . + . ID=Thaps37137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBP4];external_name=Thaps37137;logic_name=jgi_thaps3 chr13 ensembl transcript 783098 783517 . + . ID=Thaps37137;Parent=Thaps37137;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 783098 783364 . + 0 ID=Thaps37137;Parent=Thaps37137;rank=1 chr13 . exon 783098 783364 . + . ID=Thaps37137.1;Parent=Thaps37137;constitutive=1;rank=1 chr13 . CDS 783491 783517 . + 0 ID=Thaps37137;Parent=Thaps37137;rank=2 chr13 . exon 783491 783517 . + . ID=Thaps37137.2;Parent=Thaps37137;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 780204 781531 . + . ID=Thaps42258;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBP2];external_name=Thaps42258;logic_name=jgi_thaps3 chr13 ensembl transcript 780204 781531 . + . ID=Thaps42258;Parent=Thaps42258;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 780204 780283 . + 0 ID=Thaps42258;Parent=Thaps42258;rank=1 chr13 . exon 780204 780283 . + . ID=Thaps42258.1;Parent=Thaps42258;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 780417 780762 . + 0 ID=Thaps42258;Parent=Thaps42258;rank=2 chr13 . exon 780417 780762 . + . ID=Thaps42258.2;Parent=Thaps42258;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 780878 781531 . + 0 ID=Thaps42258;Parent=Thaps42258;rank=3 chr13 . exon 780878 781531 . + . ID=Thaps42258.3;Parent=Thaps42258;constitutive=1;rank=3 chr13 . exon 785664 787485 . + . ID=Thaps24704.2;Parent=Thaps24704;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . exon 787600 787674 . + . ID=Thaps24704.3;Parent=Thaps24704;constitutive=1;rank=3 chr13 . exon 787717 787746 . + . ID=Thaps24704.4;Parent=Thaps24704;constitutive=1;rank=4 chr13 . exon 787946 788072 . + . ID=Thaps24704.5;Parent=Thaps24704;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . exon 788153 788914 . + . ID=Thaps24704.6;Parent=Thaps24704;constitutive=1;rank=6 chr13 ensembl protein_coding_gene 791453 793924 . + . ID=Thaps24705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBP7];external_name=Thaps24705;logic_name=jgi_thaps3 chr13 ensembl transcript 791453 793924 . + . ID=Thaps24705;Parent=Thaps24705;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 791453 792118 . + 0 ID=Thaps24705;Parent=Thaps24705;rank=1 chr13 . exon 791453 792118 . + . ID=Thaps24705.1;Parent=Thaps24705;constitutive=1;rank=1 chr13 . CDS 792206 793035 . + 0 ID=Thaps24705;Parent=Thaps24705;rank=2 chr13 . exon 792206 793035 . + . ID=Thaps24705.2;Parent=Thaps24705;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 793126 793423 . + 0 ID=Thaps24705;Parent=Thaps24705;rank=3 chr13 . exon 793126 793423 . + . ID=Thaps24705.3;Parent=Thaps24705;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 793514 793924 . + 0 ID=Thaps24705;Parent=Thaps24705;rank=4 chr13 . exon 793514 793924 . + . ID=Thaps24705.4;Parent=Thaps24705;constitutive=1;rank=4 chr13 ensembl protein_coding_gene 789182 789973 . - . ID=Thaps9566;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBP6];external_name=Thaps9566;logic_name=jgi_thaps3 chr13 ensembl transcript 789182 789973 . - . ID=Thaps9566;Parent=Thaps9566;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 789182 789973 . - 0 ID=Thaps9566;Parent=Thaps9566;rank=1 chr13 . exon 789182 789973 . - . ID=Thaps9566.1;Parent=Thaps9566;constitutive=1;rank=1 chr13 . repeat_region 801183 801235 . ? . description=dust chr13 . repeat_region 802502 802589 . ? . description=trf chr13 ensembl protein_coding_gene 794352 798593 . - . ID=Thaps9568;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBP8];external_name=Thaps9568;logic_name=jgi_thaps3 chr13 ensembl transcript 794352 798593 . - . ID=Thaps9568;Parent=Thaps9568;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 794352 794658 . - 0 ID=Thaps9568;Parent=Thaps9568;rank=3 chr13 . exon 794352 794658 . - . ID=Thaps9568.3;Parent=Thaps9568;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 794736 794983 . - 0 ID=Thaps9568;Parent=Thaps9568;rank=2 chr13 . exon 794736 794983 . - . ID=Thaps9568.2;Parent=Thaps9568;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 795060 798593 . - 0 ID=Thaps9568;Parent=Thaps9568;rank=1 chr13 . exon 795060 798593 . - . ID=Thaps9568.1;Parent=Thaps9568;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 799543 800879 . + . ID=Thaps9569;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBP9];external_name=Thaps9569;logic_name=jgi_thaps3 chr13 ensembl transcript 799543 800879 . + . ID=Thaps9569;Parent=Thaps9569;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 799543 800879 . + 0 ID=Thaps9569;Parent=Thaps9569;rank=1 chr13 . exon 799543 800879 . + . ID=Thaps9569.1;Parent=Thaps9569;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 800983 802288 . + . ID=Thaps9570;biotype=protein_coding;description=Ubiquitin protein ligase [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ0];external_name=Thaps9570;logic_name=jgi_thaps3 chr13 ensembl transcript 800983 802288 . + . ID=Thaps9570;Parent=Thaps9570;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 800983 801172 . + 0 ID=Thaps9570;Parent=Thaps9570;rank=1 chr13 . exon 800983 801172 . + . ID=Thaps9570.1;Parent=Thaps9570;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 801340 802084 . + 0 ID=Thaps9570;Parent=Thaps9570;rank=2 chr13 . exon 801340 802084 . + . ID=Thaps9570.2;Parent=Thaps9570;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 802180 802288 . + 0 ID=Thaps9570;Parent=Thaps9570;rank=3 chr13 . exon 802180 802288 . + . ID=Thaps9570.3;Parent=Thaps9570;constitutive=1;ensembl_end_phase=1;rank=3 chr13 ensembl protein_coding_gene 803047 804738 . - . ID=Thaps9571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ1];external_name=Thaps9571;logic_name=jgi_thaps3 chr13 ensembl transcript 803047 804738 . - . ID=Thaps9571;Parent=Thaps9571;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 803047 804209 . - 0 ID=Thaps9571;Parent=Thaps9571;rank=2 chr13 . exon 803047 804209 . - . ID=Thaps9571.2;Parent=Thaps9571;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 804396 804738 . - 0 ID=Thaps9571;Parent=Thaps9571;rank=1 chr13 ensembl protein_coding_gene 807346 808506 . - . ID=Thaps24708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ3];external_name=Thaps24708;logic_name=jgi_thaps3 chr13 ensembl transcript 807346 808506 . - . ID=Thaps24708;Parent=Thaps24708;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 807346 808506 . - 0 ID=Thaps24708;Parent=Thaps24708;rank=1 chr13 . exon 807346 808506 . - . ID=Thaps24708.1;Parent=Thaps24708;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 809567 811405 . + . ID=Thaps24709;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ4];external_name=NTT6;logic_name=jgi_thaps3 chr13 ensembl transcript 809567 811405 . + . ID=Thaps24709;Parent=Thaps24709;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 809567 810502 . + 0 ID=Thaps24709;Parent=Thaps24709;rank=1 chr13 . exon 809567 810502 . + . ID=Thaps24709.1;Parent=Thaps24709;constitutive=1;rank=1 chr13 . CDS 810632 811405 . + 0 ID=Thaps24709;Parent=Thaps24709;rank=2 chr13 . exon 810632 811405 . + . ID=Thaps24709.2;Parent=Thaps24709;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 806004 806543 . - . ID=Thaps735;biotype=protein_coding;description=NADH dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ2];external_name=Thaps735;logic_name=jgi_thaps3 chr13 ensembl transcript 806004 806543 . - . ID=Thaps735;Parent=Thaps735;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 806004 806171 . - 0 ID=Thaps735;Parent=Thaps735;rank=2 chr13 . exon 806004 806171 . - . ID=Thaps735.2;Parent=Thaps735;constitutive=1;rank=2 chr13 . CDS 806259 806543 . - 0 ID=Thaps735;Parent=Thaps735;rank=1 chr13 . exon 806259 806543 . - . ID=Thaps735.1;Parent=Thaps735;constitutive=1;rank=1 chr13 . exon 804396 804738 . - . ID=Thaps9571.1;Parent=Thaps9571;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 811527 813810 . - . ID=Thaps9575;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ5];external_name=Thaps9575;logic_name=jgi_thaps3 chr13 ensembl transcript 811527 813810 . - . ID=Thaps9575;Parent=Thaps9575;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 811527 812500 . - 0 ID=Thaps9575;Parent=Thaps9575;rank=4 chr13 . exon 811527 812500 . - . ID=Thaps9575.4;Parent=Thaps9575;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 812631 812920 . - 0 ID=Thaps9575;Parent=Thaps9575;rank=3 chr13 . exon 812631 812920 . - . ID=Thaps9575.3;Parent=Thaps9575;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 812999 813270 . - 0 ID=Thaps9575;Parent=Thaps9575;rank=2 chr13 . exon 812999 813270 . - . ID=Thaps9575.2;Parent=Thaps9575;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 813361 813810 . - 0 ID=Thaps9575;Parent=Thaps9575;rank=1 chr13 . exon 813361 813810 . - . ID=Thaps9575.1;Parent=Thaps9575;constitutive=1;rank=1 chr13 . repeat_region 814149 814162 . ? . description=dust chr13 . repeat_region 814492 814564 . - . description=MuDR1_TP chr13 . repeat_region 816637 816813 . ? . description=trf chr13 . repeat_region 816743 816864 . ? . description=trf chr13 . repeat_region 817018 817044 . ? . description=trf chr13 . repeat_region 822469 822509 . ? . description=trf chr13 ensembl protein_coding_gene 820460 821847 . - . ID=Thaps24710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ8];external_name=Thaps24710;logic_name=jgi_thaps3 chr13 ensembl transcript 820460 821847 . - . ID=Thaps24710;Parent=Thaps24710;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 820460 820950 . - 0 ID=Thaps24710;Parent=Thaps24710;rank=2 chr13 . exon 820460 820950 . - . ID=Thaps24710.2;Parent=Thaps24710;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 821058 821847 . - 0 ID=Thaps24710;Parent=Thaps24710;rank=1 chr13 . exon 821058 821847 . - . ID=Thaps24710.1;Parent=Thaps24710;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 822459 823631 . + . ID=Thaps24711;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ9];external_name=Thaps24711;logic_name=jgi_thaps3 chr13 ensembl transcript 822459 823631 . + . ID=Thaps24711;Parent=Thaps24711;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 822459 823631 . + 0 ID=Thaps24711;Parent=Thaps24711;rank=1 chr13 . exon 822459 823631 . + . ID=Thaps24711.1;Parent=Thaps24711;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 816088 817611 . - . ID=Thaps9576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ6];external_name=Thaps9576;logic_name=jgi_thaps3 chr13 ensembl transcript 816088 817611 . - . ID=Thaps9576;Parent=Thaps9576;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 816088 816429 . - 0 ID=Thaps9576;Parent=Thaps9576;rank=3 chr13 . exon 816088 816429 . - . ID=Thaps9576.3;Parent=Thaps9576;constitutive=1;rank=3 chr13 . CDS 816489 816901 . - 0 ID=Thaps9576;Parent=Thaps9576;rank=2 chr13 . exon 816489 816901 . - . ID=Thaps9576.2;Parent=Thaps9576;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 816927 817611 . - 0 ID=Thaps9576;Parent=Thaps9576;rank=1 chr13 . exon 816927 817611 . - . ID=Thaps9576.1;Parent=Thaps9576;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 818518 819975 . + . ID=Thaps9577;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBQ7];external_name=Thaps9577;logic_name=jgi_thaps3 chr13 ensembl transcript 818518 819975 . + . ID=Thaps9577;Parent=Thaps9577;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 818518 819975 . + 0 ID=Thaps9577;Parent=Thaps9577;rank=1 chr13 . exon 818518 819975 . + . ID=Thaps9577.1;Parent=Thaps9577;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 824936 832480 . - . ID=Thaps24712;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBR0];external_name=Thaps24712;logic_name=jgi_thaps3 chr13 ensembl transcript 824936 832480 . - . ID=Thaps24712;Parent=Thaps24712;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 824936 826822 . - 0 ID=Thaps24712;Parent=Thaps24712;rank=6 chr13 . exon 824936 826822 . - . ID=Thaps24712.6;Parent=Thaps24712;constitutive=1;rank=6 chr13 . CDS 826916 827386 . - 0 ID=Thaps24712;Parent=Thaps24712;rank=5 chr13 . exon 826916 827386 . - . ID=Thaps24712.5;Parent=Thaps24712;constitutive=1;rank=5 chr13 . CDS 827510 828142 . - 0 ID=Thaps24712;Parent=Thaps24712;rank=4 chr13 . exon 827510 828142 . - . ID=Thaps24712.4;Parent=Thaps24712;constitutive=1;rank=4 chr13 . CDS 828257 828500 . - 0 ID=Thaps24712;Parent=Thaps24712;rank=3 chr13 . exon 828257 828500 . - . ID=Thaps24712.3;Parent=Thaps24712;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 828583 832220 . - 0 ID=Thaps24712;Parent=Thaps24712;rank=2 chr13 . exon 828583 832220 . - . ID=Thaps24712.2;Parent=Thaps24712;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 832337 832480 . - 0 ID=Thaps24712;Parent=Thaps24712;rank=1 chr13 . exon 832337 832480 . - . ID=Thaps24712.1;Parent=Thaps24712;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 832866 834026 . + . ID=Thaps9581;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBR1];external_name=Thaps9581;logic_name=jgi_thaps3 chr13 ensembl transcript 832866 834026 . + . ID=Thaps9581;Parent=Thaps9581;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 832866 832929 . + 0 ID=Thaps9581;Parent=Thaps9581;rank=1 chr13 . exon 832866 832929 . + . ID=Thaps9581.1;Parent=Thaps9581;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 832971 834026 . + 0 ID=Thaps9581;Parent=Thaps9581;rank=2 chr13 . exon 832971 834026 . + . ID=Thaps9581.2;Parent=Thaps9581;constitutive=1;rank=2 chr13 . repeat_region 836179 836186 . ? . description=dust chr13 . repeat_region 836650 836678 . ? . description=dust chr13 . repeat_region 837918 837963 . ? . description=dust chr13 . biological_region 838725 838727 0.999 + . logic_name=eponine chr13 ensembl protein_coding_gene 839556 841040 . - . ID=Thaps24714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBR4];external_name=Thaps24714;logic_name=jgi_thaps3 chr13 ensembl transcript 839556 841040 . - . ID=Thaps24714;Parent=Thaps24714;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 839556 841040 . - 0 ID=Thaps24714;Parent=Thaps24714;rank=1 chr13 . exon 839556 841040 . - . ID=Thaps24714.1;Parent=Thaps24714;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 841296 843061 . + . ID=Thaps24715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBR5];external_name=Thaps24715;logic_name=jgi_thaps3 chr13 ensembl transcript 841296 843061 . + . ID=Thaps24715;Parent=Thaps24715;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 841296 841919 . + 0 ID=Thaps24715;Parent=Thaps24715;rank=1 chr13 . exon 841296 841919 . + . ID=Thaps24715.1;Parent=Thaps24715;constitutive=1;rank=1 chr13 . CDS 842183 843061 . + 0 ID=Thaps24715;Parent=Thaps24715;rank=2 chr13 . exon 842183 843061 . + . ID=Thaps24715.2;Parent=Thaps24715;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 834274 835696 . - . ID=Thaps264058;biotype=protein_coding;description=Phosphatase 2A (PP2A) regulatory subunit B-like protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBR2];external_name=Thaps264058;logic_name=jgi_thaps3 chr13 ensembl transcript 834274 835696 . - . ID=Thaps264058;Parent=Thaps264058;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 834274 834549 . - 0 ID=Thaps264058;Parent=Thaps264058;rank=5 chr13 . exon 834274 834549 . - . ID=Thaps264058.5;Parent=Thaps264058;constitutive=1;rank=5 chr13 . CDS 834647 834830 . - 0 ID=Thaps264058;Parent=Thaps264058;rank=4 chr13 . exon 834647 834830 . - . ID=Thaps264058.4;Parent=Thaps264058;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 834870 835240 . - 0 ID=Thaps264058;Parent=Thaps264058;rank=3 chr13 . exon 834870 835240 . - . ID=Thaps264058.3;Parent=Thaps264058;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 835364 835535 . - 0 ID=Thaps264058;Parent=Thaps264058;rank=2 chr13 . exon 835364 835535 . - . ID=Thaps264058.2;Parent=Thaps264058;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 835608 835696 . - 0 ID=Thaps264058;Parent=Thaps264058;rank=1 chr13 . exon 835608 835696 . - . ID=Thaps264058.1;Parent=Thaps264058;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 836980 838083 . - . ID=Thaps42265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBR3];external_name=Thaps42265;logic_name=jgi_thaps3 chr13 ensembl transcript 836980 838083 . - . ID=Thaps42265;Parent=Thaps42265;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 836980 838083 . - 0 ID=Thaps42265;Parent=Thaps42265;rank=1 chr13 . exon 836980 838083 . - . ID=Thaps42265.1;Parent=Thaps42265;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 851531 852084 . + . ID=Thaps264061;biotype=protein_coding;description=Dual specific tyrosine protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8CBR9];external_name=Thaps264061;logic_name=jgi_thaps3 chr13 ensembl transcript 851531 852084 . + . ID=Thaps264061;Parent=Thaps264061;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 851531 851625 . + 0 ID=Thaps264061;Parent=Thaps264061;rank=1 chr13 . exon 851531 851625 . + . ID=Thaps264061.1;Parent=Thaps264061;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 851723 852084 . + 0 ID=Thaps264061;Parent=Thaps264061;rank=2 chr13 . exon 851723 852084 . + . ID=Thaps264061.2;Parent=Thaps264061;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 848748 850404 . - . ID=Thaps269704;biotype=protein_coding;description=Threonine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CBR8];external_name=Thaps269704;logic_name=jgi_thaps3 chr13 ensembl transcript 848748 850404 . - . ID=Thaps269704;Parent=Thaps269704;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 848748 849959 . - 0 ID=Thaps269704;Parent=Thaps269704;rank=2 chr13 . exon 848748 849959 . - . ID=Thaps269704.2;Parent=Thaps269704;constitutive=1;rank=2 chr13 . CDS 850087 850404 . - 0 ID=Thaps269704;Parent=Thaps269704;rank=1 chr13 . exon 850087 850404 . - . ID=Thaps269704.1;Parent=Thaps269704;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 847427 847963 . + . ID=Thaps37032;biotype=protein_coding;description=60S ribosomal protein L6 [Source:UniProtKB/TrEMBL%3BAcc:B8CBR7];external_name=RL6;logic_name=jgi_thaps3 chr13 ensembl transcript 847427 847963 . + . ID=Thaps37032;Parent=Thaps37032;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 847427 847963 . + 0 ID=Thaps37032;Parent=Thaps37032;rank=1 chr13 . exon 847427 847963 . + . ID=Thaps37032.1;Parent=Thaps37032;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 845134 846093 . + . ID=Thaps9587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBR6];external_name=Thaps9587;logic_name=jgi_thaps3 chr13 ensembl transcript 845134 846093 . + . ID=Thaps9587;Parent=Thaps9587;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 845134 846093 . + 0 ID=Thaps9587;Parent=Thaps9587;rank=1 chr13 . exon 845134 846093 . + . ID=Thaps9587.1;Parent=Thaps9587;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 852814 855838 . - . ID=Thaps9591;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBS0];external_name=Thaps9591;logic_name=jgi_thaps3 chr13 ensembl transcript 852814 855838 . - . ID=Thaps9591;Parent=Thaps9591;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 852814 854929 . - 0 ID=Thaps9591;Parent=Thaps9591;rank=2 chr13 . exon 852814 854929 . - . ID=Thaps9591.2;Parent=Thaps9591;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 855003 855838 . - 0 ID=Thaps9591;Parent=Thaps9591;rank=1 chr13 . repeat_region 860348 860373 . ? . description=dust chr13 . repeat_region 860348 860377 . ? . description=trf chr13 . repeat_region 860635 860665 . ? . description=trf chr13 ensembl protein_coding_gene 856298 857281 . + . ID=Thaps14637;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBS1];external_name=Thaps14637;logic_name=jgi_thaps3 chr13 ensembl transcript 856298 857281 . + . ID=Thaps14637;Parent=Thaps14637;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 856298 856751 . + 0 ID=Thaps14637;Parent=Thaps14637;rank=1 chr13 . exon 856298 856751 . + . ID=Thaps14637.1;Parent=Thaps14637;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 856809 857281 . + 0 ID=Thaps14637;Parent=Thaps14637;rank=2 chr13 . exon 856809 857281 . + . ID=Thaps14637.2;Parent=Thaps14637;constitutive=1;ensembl_end_phase=2;rank=2 chr13 ensembl protein_coding_gene 862386 862949 . - . ID=Thaps17880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBS4];external_name=Thaps17880;logic_name=jgi_thaps3 chr13 ensembl transcript 862386 862949 . - . ID=Thaps17880;Parent=Thaps17880;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 862386 862949 . - 0 ID=Thaps17880;Parent=Thaps17880;rank=1 chr13 . exon 862386 862949 . - . ID=Thaps17880.1;Parent=Thaps17880;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 857428 859296 . - . ID=Thaps24718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBS2];external_name=Thaps24718;logic_name=jgi_thaps3 chr13 ensembl transcript 857428 859296 . - . ID=Thaps24718;Parent=Thaps24718;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 857428 859296 . - 0 ID=Thaps24718;Parent=Thaps24718;rank=1 chr13 . exon 857428 859296 . - . ID=Thaps24718.1;Parent=Thaps24718;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 863171 864272 . + . ID=Thaps264063;biotype=protein_coding;description=Pseudouridylate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CBS5];external_name=Thaps264063;logic_name=jgi_thaps3 chr13 ensembl transcript 863171 864272 . + . ID=Thaps264063;Parent=Thaps264063;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 863171 863201 . + 0 ID=Thaps264063;Parent=Thaps264063;rank=1 chr13 . exon 863171 863201 . + . ID=Thaps264063.1;Parent=Thaps264063;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 863406 863527 . + 0 ID=Thaps264063;Parent=Thaps264063;rank=2 chr13 . exon 863406 863527 . + . ID=Thaps264063.2;Parent=Thaps264063;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 863624 863950 . + 0 ID=Thaps264063;Parent=Thaps264063;rank=3 chr13 . exon 863624 863950 . + . ID=Thaps264063.3;Parent=Thaps264063;constitutive=1;rank=3 chr13 . CDS 863993 864272 . + 0 ID=Thaps264063;Parent=Thaps264063;rank=4 chr13 . exon 855003 855838 . - . ID=Thaps9591.1;Parent=Thaps9591;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 859724 861641 . + . ID=Thaps9594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBS3];external_name=Thaps9594;logic_name=jgi_thaps3 chr13 ensembl transcript 859724 861641 . + . ID=Thaps9594;Parent=Thaps9594;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 859724 860630 . + 0 ID=Thaps9594;Parent=Thaps9594;rank=1 chr13 . exon 859724 860630 . + . ID=Thaps9594.1;Parent=Thaps9594;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 860734 861641 . + 0 ID=Thaps9594;Parent=Thaps9594;rank=2 chr13 . exon 860734 861641 . + . ID=Thaps9594.2;Parent=Thaps9594;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . repeat_region 873510 873607 . - . description=TE2c_TP chr13 ensembl protein_coding_gene 866372 870023 . + . ID=Thaps24719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBS6];external_name=Thaps24719;logic_name=jgi_thaps3 chr13 ensembl transcript 866372 870023 . + . ID=Thaps24719;Parent=Thaps24719;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 866372 868347 . + 0 ID=Thaps24719;Parent=Thaps24719;rank=1 chr13 . exon 866372 868347 . + . ID=Thaps24719.1;Parent=Thaps24719;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 868425 868887 . + 0 ID=Thaps24719;Parent=Thaps24719;rank=2 chr13 . exon 868425 868887 . + . ID=Thaps24719.2;Parent=Thaps24719;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 868965 870023 . + 0 ID=Thaps24719;Parent=Thaps24719;rank=3 chr13 . exon 868965 870023 . + . ID=Thaps24719.3;Parent=Thaps24719;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 871538 872101 . - . ID=Thaps24720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBS8];external_name=Thaps24720;logic_name=jgi_thaps3 chr13 ensembl transcript 871538 872101 . - . ID=Thaps24720;Parent=Thaps24720;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 871538 872101 . - 0 ID=Thaps24720;Parent=Thaps24720;rank=1 chr13 . exon 871538 872101 . - . ID=Thaps24720.1;Parent=Thaps24720;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 872939 873445 . - . ID=Thaps24721;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBS9];external_name=Thaps24721;logic_name=jgi_thaps3 chr13 ensembl transcript 872939 873445 . - . ID=Thaps24721;Parent=Thaps24721;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 872939 873445 . - 0 ID=Thaps24721;Parent=Thaps24721;rank=1 chr13 . exon 872939 873445 . - . ID=Thaps24721.1;Parent=Thaps24721;constitutive=1;rank=1 chr13 . exon 863993 864272 . + . ID=Thaps264063.4;Parent=Thaps264063;constitutive=1;ensembl_end_phase=1;rank=4 chr13 ensembl protein_coding_gene 870402 871418 . + . ID=Thaps9598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBS7];external_name=Thaps9598;logic_name=jgi_thaps3 chr13 ensembl transcript 870402 871418 . + . ID=Thaps9598;Parent=Thaps9598;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 870402 871418 . + 0 ID=Thaps9598;Parent=Thaps9598;rank=1 chr13 . exon 870402 871418 . + . ID=Thaps9598.1;Parent=Thaps9598;constitutive=1;rank=1 chr13 . repeat_region 873633 873646 . ? . description=dust chr13 . repeat_region 873686 873744 . ? . description=trf chr13 . repeat_region 873976 874051 . ? . description=trf chr13 . repeat_region 874503 874542 . ? . description=trf chr13 . repeat_region 877567 877574 . ? . description=dust chr13 . repeat_region 878169 878188 . ? . description=trf chr13 . repeat_region 878355 878389 . ? . description=trf chr13 ensembl protein_coding_gene 878422 881786 . + . ID=Thaps264064;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CBT2];external_name=Thaps264064;logic_name=jgi_thaps3 chr13 ensembl transcript 878422 881786 . + . ID=Thaps264064;Parent=Thaps264064;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 878422 878677 . + 0 ID=Thaps264064;Parent=Thaps264064;rank=1 chr13 . exon 878422 878677 . + . ID=Thaps264064.1;Parent=Thaps264064;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 878738 879041 . + 0 ID=Thaps264064;Parent=Thaps264064;rank=2 chr13 . exon 878738 879041 . + . ID=Thaps264064.2;Parent=Thaps264064;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 879066 879209 . + 0 ID=Thaps264064;Parent=Thaps264064;rank=3 chr13 . exon 879066 879209 . + . ID=Thaps264064.3;Parent=Thaps264064;constitutive=1;rank=3 chr13 . CDS 879303 879733 . + 0 ID=Thaps264064;Parent=Thaps264064;rank=4 chr13 . exon 879303 879733 . + . ID=Thaps264064.4;Parent=Thaps264064;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 879820 879853 . + 0 ID=Thaps264064;Parent=Thaps264064;rank=5 chr13 . exon 879820 879853 . + . ID=Thaps264064.5;Parent=Thaps264064;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . CDS 879896 880013 . + 0 ID=Thaps264064;Parent=Thaps264064;rank=6 chr13 . exon 879896 880013 . + . ID=Thaps264064.6;Parent=Thaps264064;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . CDS 880093 881001 . + 0 ID=Thaps264064;Parent=Thaps264064;rank=7 chr13 . exon 880093 881001 . + . ID=Thaps264064.7;Parent=Thaps264064;constitutive=1;rank=7 chr13 . CDS 881032 881786 . + 0 ID=Thaps264064;Parent=Thaps264064;rank=8 chr13 . exon 881032 881786 . + . ID=Thaps264064.8;Parent=Thaps264064;constitutive=1;ensembl_end_phase=2;rank=8 chr13 ensembl protein_coding_gene 874993 876006 . - . ID=Thaps37124;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBT0];external_name=Thaps37124;logic_name=jgi_thaps3 chr13 ensembl transcript 874993 876006 . - . ID=Thaps37124;Parent=Thaps37124;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 874993 876006 . - 0 ID=Thaps37124;Parent=Thaps37124;rank=1 chr13 . exon 874993 876006 . - . ID=Thaps37124.1;Parent=Thaps37124;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 876421 877161 . - . ID=Thaps9602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBT1];external_name=Thaps9602;logic_name=jgi_thaps3 chr13 ensembl transcript 876421 877161 . - . ID=Thaps9602;Parent=Thaps9602;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 876421 876568 . - 0 ID=Thaps9602;Parent=Thaps9602;rank=3 chr13 . exon 876421 876568 . - . ID=Thaps9602.3;Parent=Thaps9602;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 876790 877021 . - 0 ID=Thaps9602;Parent=Thaps9602;rank=2 chr13 . exon 876790 877021 . - . ID=Thaps9602.2;Parent=Thaps9602;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 877116 877161 . - 0 ID=Thaps9602;Parent=Thaps9602;rank=1 chr13 . exon 877116 877161 . - . ID=Thaps9602.1;Parent=Thaps9602;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 882302 882753 . - . ID=Thaps9604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBT3];external_name=Thaps9604;logic_name=jgi_thaps3 chr13 ensembl transcript 882302 882753 . - . ID=Thaps9604;Parent=Thaps9604;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 882302 882646 . - 0 ID=Thaps9604;Parent=Thaps9604;rank=2 chr13 . exon 882302 882646 . - . ID=Thaps9604.2;Parent=Thaps9604;constitutive=1;rank=2 chr13 . CDS 882745 882753 . - 0 ID=Thaps9604;Parent=Thaps9604;rank=1 chr13 . exon 882745 882753 . - . ID=Thaps9604.1;Parent=Thaps9604;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 891125 894457 . - . ID=Thaps24722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBT5];external_name=Thaps24722;logic_name=jgi_thaps3 chr13 ensembl transcript 891125 894457 . - . ID=Thaps24722;Parent=Thaps24722;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 891125 894457 . - 0 ID=Thaps24722;Parent=Thaps24722;rank=1 chr13 . exon 891125 894457 . - . ID=Thaps24722.1;Parent=Thaps24722;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 883885 890173 . - . ID=Thaps9605;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBT4];external_name=Thaps9605;logic_name=jgi_thaps3 chr13 ensembl transcript 883885 890173 . - . ID=Thaps9605;Parent=Thaps9605;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 883885 885340 . - 0 ID=Thaps9605;Parent=Thaps9605;rank=4 chr13 . exon 883885 885340 . - . ID=Thaps9605.4;Parent=Thaps9605;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 885481 885907 . - 0 ID=Thaps9605;Parent=Thaps9605;rank=3 chr13 . exon 885481 885907 . - . ID=Thaps9605.3;Parent=Thaps9605;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 886290 887446 . - 0 ID=Thaps9605;Parent=Thaps9605;rank=2 chr13 . exon 886290 887446 . - . ID=Thaps9605.2;Parent=Thaps9605;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 887544 890173 . - 0 ID=Thaps9605;Parent=Thaps9605;rank=1 chr13 . exon 887544 890173 . - . ID=Thaps9605.1;Parent=Thaps9605;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . repeat_region 903061 903104 . ? . description=dust chr13 . repeat_region 903078 903104 . ? . description=trf chr13 ensembl protein_coding_gene 897256 898076 . - . ID=Thaps264065;biotype=protein_coding;description=Uroporphyrin-iii C-methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CBT7];external_name=COBA;logic_name=jgi_thaps3 chr13 ensembl transcript 897256 898076 . - . ID=Thaps264065;Parent=Thaps264065;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 897256 897315 . - 0 ID=Thaps264065;Parent=Thaps264065;rank=4 chr13 . exon 897256 897315 . - . ID=Thaps264065.4;Parent=Thaps264065;constitutive=1;rank=4 chr13 . CDS 897331 897421 . - 0 ID=Thaps264065;Parent=Thaps264065;rank=3 chr13 . exon 897331 897421 . - . ID=Thaps264065.3;Parent=Thaps264065;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 897479 897577 . - 0 ID=Thaps264065;Parent=Thaps264065;rank=2 chr13 . exon 897479 897577 . - . ID=Thaps264065.2;Parent=Thaps264065;constitutive=1;rank=2 chr13 . CDS 897602 898076 . - 0 ID=Thaps264065;Parent=Thaps264065;rank=1 chr13 . exon 897602 898076 . - . ID=Thaps264065.1;Parent=Thaps264065;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 900475 901475 . - . ID=Thaps269705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBT9];external_name=Thaps269705;logic_name=jgi_thaps3 chr13 ensembl transcript 900475 901475 . - . ID=Thaps269705;Parent=Thaps269705;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 900475 900994 . - 0 ID=Thaps269705;Parent=Thaps269705;rank=2 chr13 . exon 900475 900994 . - . ID=Thaps269705.2;Parent=Thaps269705;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 901438 901475 . - 0 ID=Thaps269705;Parent=Thaps269705;rank=1 chr13 . exon 901438 901475 . - . ID=Thaps269705.1;Parent=Thaps269705;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 895023 896556 . + . ID=Thaps9607;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBT6];external_name=Thaps9607;logic_name=jgi_thaps3 chr13 ensembl transcript 895023 896556 . + . ID=Thaps9607;Parent=Thaps9607;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 895023 895274 . + 0 ID=Thaps9607;Parent=Thaps9607;rank=1 chr13 . exon 895023 895274 . + . ID=Thaps9607.1;Parent=Thaps9607;constitutive=1;rank=1 chr13 . CDS 895302 895353 . + 0 ID=Thaps9607;Parent=Thaps9607;rank=2 chr13 . exon 895302 895353 . + . ID=Thaps9607.2;Parent=Thaps9607;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 895464 895565 . + 0 ID=Thaps9607;Parent=Thaps9607;rank=3 chr13 . exon 895464 895565 . + . ID=Thaps9607.3;Parent=Thaps9607;constitutive=1;rank=3 chr13 . CDS 895711 895799 . + 0 ID=Thaps9607;Parent=Thaps9607;rank=4 chr13 . exon 895711 895799 . + . ID=Thaps9607.4;Parent=Thaps9607;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 895891 896556 . + 0 ID=Thaps9607;Parent=Thaps9607;rank=5 chr13 . exon 895891 896556 . + . ID=Thaps9607.5;Parent=Thaps9607;constitutive=1;rank=5 chr13 ensembl protein_coding_gene 898978 899791 . + . ID=Thaps9608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBT8];external_name=Thaps9608;logic_name=jgi_thaps3 chr13 ensembl transcript 898978 899791 . + . ID=Thaps9608;Parent=Thaps9608;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 898978 899090 . + 0 ID=Thaps9608;Parent=Thaps9608;rank=1 chr13 . exon 898978 899090 . + . ID=Thaps9608.1;Parent=Thaps9608;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 899188 899302 . + 0 ID=Thaps9608;Parent=Thaps9608;rank=2 chr13 . exon 899188 899302 . + . ID=Thaps9608.2;Parent=Thaps9608;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 899387 899791 . + 0 ID=Thaps9608;Parent=Thaps9608;rank=3 chr13 . exon 899387 899791 . + . ID=Thaps9608.3;Parent=Thaps9608;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 910107 913703 . - . ID=Thaps12292;biotype=protein_coding;description=ABC transporter%2C MRP family [Source:UniProtKB/TrEMBL%3BAcc:B8CBU2];external_name=Thaps12292;logic_name=jgi_thaps3 chr13 ensembl transcript 910107 913703 . - . ID=Thaps12292;Parent=Thaps12292;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 910107 912752 . - 0 ID=Thaps12292;Parent=Thaps12292;rank=2 chr13 . exon 910107 912752 . - . ID=Thaps12292.2;Parent=Thaps12292;constitutive=1;rank=2 chr13 . CDS 912888 913703 . - 0 ID=Thaps12292;Parent=Thaps12292;rank=1 chr13 . exon 912888 913703 . - . ID=Thaps12292.1;Parent=Thaps12292;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 906342 908491 . + . ID=Thaps12846;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBU1];external_name=Thaps12846;logic_name=jgi_thaps3 chr13 ensembl transcript 906342 908491 . + . ID=Thaps12846;Parent=Thaps12846;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 906342 906476 . + 0 ID=Thaps12846;Parent=Thaps12846;rank=1 chr13 . exon 906342 906476 . + . ID=Thaps12846.1;Parent=Thaps12846;constitutive=1;rank=1 chr13 . CDS 906649 907443 . + 0 ID=Thaps12846;Parent=Thaps12846;rank=2 chr13 . exon 906649 907443 . + . ID=Thaps12846.2;Parent=Thaps12846;constitutive=1;rank=2 chr13 . CDS 907536 907563 . + 0 ID=Thaps12846;Parent=Thaps12846;rank=3 chr13 . exon 907536 907563 . + . ID=Thaps12846.3;Parent=Thaps12846;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 907639 907928 . + 0 ID=Thaps12846;Parent=Thaps12846;rank=4 chr13 . exon 907639 907928 . + . ID=Thaps12846.4;Parent=Thaps12846;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 908017 908084 . + 0 ID=Thaps12846;Parent=Thaps12846;rank=5 chr13 . exon 908017 908084 . + . ID=Thaps12846.5;Parent=Thaps12846;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 908179 908491 . + 0 ID=Thaps12846;Parent=Thaps12846;rank=6 chr13 . exon 908179 908491 . + . ID=Thaps12846.6;Parent=Thaps12846;constitutive=1;ensembl_end_phase=1;rank=6 chr13 ensembl protein_coding_gene 904264 904959 . - . ID=Thaps18348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBU0];external_name=Thaps18348;logic_name=jgi_thaps3 chr13 ensembl transcript 904264 904959 . - . ID=Thaps18348;Parent=Thaps18348;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 904264 904597 . - 0 ID=Thaps18348;Parent=Thaps18348;rank=2 chr13 . exon 904264 904597 . - . ID=Thaps18348.2;Parent=Thaps18348;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 904733 904959 . - 0 ID=Thaps18348;Parent=Thaps18348;rank=1 chr13 . exon 904733 904959 . - . ID=Thaps18348.1;Parent=Thaps18348;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . repeat_region 918119 918148 . ? . description=trf chr13 . repeat_region 919907 919967 . ? . description=dust chr13 ensembl protein_coding_gene 918396 919606 . - . ID=Thaps24725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBU4];external_name=Thaps24725;logic_name=jgi_thaps3 chr13 ensembl transcript 918396 919606 . - . ID=Thaps24725;Parent=Thaps24725;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 918396 919189 . - 0 ID=Thaps24725;Parent=Thaps24725;rank=2 chr13 . exon 918396 919189 . - . ID=Thaps24725.2;Parent=Thaps24725;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 919405 919606 . - 0 ID=Thaps24725;Parent=Thaps24725;rank=1 chr13 . exon 919405 919606 . - . ID=Thaps24725.1;Parent=Thaps24725;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 922209 923737 . - . ID=Thaps24726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBU6];external_name=Thaps24726;logic_name=jgi_thaps3 chr13 ensembl transcript 922209 923737 . - . ID=Thaps24726;Parent=Thaps24726;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 922209 922360 . - 0 ID=Thaps24726;Parent=Thaps24726;rank=4 chr13 . exon 922209 922360 . - . ID=Thaps24726.4;Parent=Thaps24726;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 922445 922798 . - 0 ID=Thaps24726;Parent=Thaps24726;rank=3 chr13 . exon 922445 922798 . - . ID=Thaps24726.3;Parent=Thaps24726;constitutive=1;rank=3 chr13 . CDS 922885 923148 . - 0 ID=Thaps24726;Parent=Thaps24726;rank=2 chr13 . exon 922885 923148 . - . ID=Thaps24726.2;Parent=Thaps24726;constitutive=1;rank=2 chr13 . CDS 923224 923737 . - 0 ID=Thaps24726;Parent=Thaps24726;rank=1 chr13 ensembl protein_coding_gene 915191 916553 . - . ID=Thaps264070;biotype=protein_coding;description=Signal recognition particle-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBU3];external_name=Thaps264070;logic_name=jgi_thaps3 chr13 ensembl transcript 915191 916553 . - . ID=Thaps264070;Parent=Thaps264070;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 915191 915765 . - 0 ID=Thaps264070;Parent=Thaps264070;rank=4 chr13 . exon 915191 915765 . - . ID=Thaps264070.4;Parent=Thaps264070;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 915839 915869 . - 0 ID=Thaps264070;Parent=Thaps264070;rank=3 chr13 . exon 915839 915869 . - . ID=Thaps264070.3;Parent=Thaps264070;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 915957 916334 . - 0 ID=Thaps264070;Parent=Thaps264070;rank=2 chr13 . exon 915957 916334 . - . ID=Thaps264070.2;Parent=Thaps264070;constitutive=1;rank=2 chr13 . CDS 916434 916553 . - 0 ID=Thaps264070;Parent=Thaps264070;rank=1 chr13 . exon 916434 916553 . - . ID=Thaps264070.1;Parent=Thaps264070;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 920031 920582 . + . ID=Thaps9617;biotype=protein_coding;description=Synaptobrevin [Source:UniProtKB/TrEMBL%3BAcc:B8CBU5];external_name=Thaps9617;logic_name=jgi_thaps3 chr13 ensembl transcript 920031 920582 . + . ID=Thaps9617;Parent=Thaps9617;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 920031 920582 . + 0 ID=Thaps9617;Parent=Thaps9617;rank=1 chr13 . exon 920031 920582 . + . ID=Thaps9617.1;Parent=Thaps9617;constitutive=1;rank=1 chr13 . biological_region 930650 930652 0.999 - . logic_name=eponine chr13 . exon 923224 923737 . - . ID=Thaps24726.1;Parent=Thaps24726;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 927377 928183 . + . ID=Thaps264072;biotype=protein_coding;description=Putative uncharacterized protein HSF43 [Source:UniProtKB/TrEMBL%3BAcc:B8CBU8];external_name=HSF43;logic_name=jgi_thaps3 chr13 ensembl transcript 927377 928183 . + . ID=Thaps264072;Parent=Thaps264072;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 927377 927791 . + 0 ID=Thaps264072;Parent=Thaps264072;rank=1 chr13 . exon 927377 927791 . + . ID=Thaps264072.1;Parent=Thaps264072;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 927944 928183 . + 0 ID=Thaps264072;Parent=Thaps264072;rank=2 chr13 . exon 927944 928183 . + . ID=Thaps264072.2;Parent=Thaps264072;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 931894 933486 . - . ID=Thaps37083;biotype=protein_coding;description=DnaJ protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBU9];external_name=Thaps37083;logic_name=jgi_thaps3 chr13 ensembl transcript 931894 933486 . - . ID=Thaps37083;Parent=Thaps37083;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 931894 933021 . - 0 ID=Thaps37083;Parent=Thaps37083;rank=2 chr13 . exon 931894 933021 . - . ID=Thaps37083.2;Parent=Thaps37083;constitutive=1;rank=2 chr13 . CDS 933394 933486 . - 0 ID=Thaps37083;Parent=Thaps37083;rank=1 chr13 ensembl protein_coding_gene 924160 925913 . - . ID=Thaps9619;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBU7];external_name=Thaps9619;logic_name=jgi_thaps3 chr13 ensembl transcript 924160 925913 . - . ID=Thaps9619;Parent=Thaps9619;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 924160 924540 . - 0 ID=Thaps9619;Parent=Thaps9619;rank=3 chr13 . exon 924160 924540 . - . ID=Thaps9619.3;Parent=Thaps9619;constitutive=1;rank=3 chr13 . CDS 924661 925436 . - 0 ID=Thaps9619;Parent=Thaps9619;rank=2 chr13 . exon 924661 925436 . - . ID=Thaps9619.2;Parent=Thaps9619;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 925526 925913 . - 0 ID=Thaps9619;Parent=Thaps9619;rank=1 chr13 . exon 925526 925913 . - . ID=Thaps9619.1;Parent=Thaps9619;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . repeat_region 934377 934403 . ? . description=dust chr13 . repeat_region 936152 936174 . ? . description=trf chr13 . repeat_region 936152 936174 . ? . description=dust chr13 . repeat_region 936611 936635 . ? . description=trf chr13 . repeat_region 936611 936635 . ? . description=dust chr13 . repeat_region 936762 936820 . ? . description=dust chr13 . repeat_region 936781 936820 . ? . description=trf chr13 . repeat_region 937989 938020 . ? . description=dust chr13 . repeat_region 937990 938020 . ? . description=trf chr13 . repeat_region 940710 940767 . ? . description=dust chr13 . repeat_region 941817 941848 . ? . description=dust chr13 ensembl protein_coding_gene 934217 936571 . - . ID=Thaps13065;biotype=protein_coding;description=Carnitine acetyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8CBV0];external_name=CAT1_2;logic_name=jgi_thaps3 chr13 ensembl transcript 934217 936571 . - . ID=Thaps13065;Parent=Thaps13065;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 934217 934374 . - 0 ID=Thaps13065;Parent=Thaps13065;rank=5 chr13 . exon 934217 934374 . - . ID=Thaps13065.5;Parent=Thaps13065;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 934475 935513 . - 0 ID=Thaps13065;Parent=Thaps13065;rank=4 chr13 . exon 934475 935513 . - . ID=Thaps13065.4;Parent=Thaps13065;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 935604 935837 . - 0 ID=Thaps13065;Parent=Thaps13065;rank=3 chr13 . exon 935604 935837 . - . ID=Thaps13065.3;Parent=Thaps13065;constitutive=1;rank=3 chr13 . CDS 935934 936083 . - 0 ID=Thaps13065;Parent=Thaps13065;rank=2 chr13 . exon 935934 936083 . - . ID=Thaps13065.2;Parent=Thaps13065;constitutive=1;rank=2 chr13 . CDS 936230 936571 . - 0 ID=Thaps13065;Parent=Thaps13065;rank=1 chr13 . exon 936230 936571 . - . ID=Thaps13065.1;Parent=Thaps13065;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 936827 938905 . + . ID=Thaps24729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBV1];external_name=Thaps24729;logic_name=jgi_thaps3 chr13 ensembl transcript 936827 938905 . + . ID=Thaps24729;Parent=Thaps24729;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 936827 936895 . + 0 ID=Thaps24729;Parent=Thaps24729;rank=1 chr13 . exon 936827 936895 . + . ID=Thaps24729.1;Parent=Thaps24729;constitutive=1;rank=1 chr13 . CDS 937025 938905 . + 0 ID=Thaps24729;Parent=Thaps24729;rank=2 chr13 . exon 937025 938905 . + . ID=Thaps24729.2;Parent=Thaps24729;constitutive=1;rank=2 chr13 . exon 933394 933486 . - . ID=Thaps37083.1;Parent=Thaps37083;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 942706 944571 . + . ID=Thaps37123;biotype=protein_coding;description=Vacuolar proton pump alpha subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CBV3];external_name=VAT2;logic_name=jgi_thaps3 chr13 ensembl transcript 942706 944571 . + . ID=Thaps37123;Parent=Thaps37123;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 942706 944571 . + 0 ID=Thaps37123;Parent=Thaps37123;rank=1 chr13 . exon 942706 944571 . + . ID=Thaps37123.1;Parent=Thaps37123;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 939524 941817 . - . ID=Thaps42282;biotype=protein_coding;description=RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8CBV2];external_name=Thaps42282;logic_name=jgi_thaps3 chr13 ensembl transcript 939524 941817 . - . ID=Thaps42282;Parent=Thaps42282;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 939524 940651 . - 0 ID=Thaps42282;Parent=Thaps42282;rank=2 chr13 . exon 939524 940651 . - . ID=Thaps42282.2;Parent=Thaps42282;constitutive=1;rank=2 chr13 . CDS 940783 941817 . - 0 ID=Thaps42282;Parent=Thaps42282;rank=1 chr13 . exon 940783 941817 . - . ID=Thaps42282.1;Parent=Thaps42282;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 950439 951026 . + . ID=Thaps18392;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBV6];external_name=Thaps18392;logic_name=jgi_thaps3 chr13 ensembl transcript 950439 951026 . + . ID=Thaps18392;Parent=Thaps18392;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 950439 951026 . + 0 ID=Thaps18392;Parent=Thaps18392;rank=1 chr13 . exon 950439 951026 . + . ID=Thaps18392.1;Parent=Thaps18392;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 951149 955805 . - . ID=Thaps24733;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBV7];external_name=Thaps24733;logic_name=jgi_thaps3 chr13 ensembl transcript 951149 955805 . - . ID=Thaps24733;Parent=Thaps24733;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 951149 952057 . - 0 ID=Thaps24733;Parent=Thaps24733;rank=5 chr13 . exon 951149 952057 . - . ID=Thaps24733.5;Parent=Thaps24733;constitutive=1;rank=5 chr13 . CDS 952155 952311 . - 0 ID=Thaps24733;Parent=Thaps24733;rank=4 chr13 . exon 952155 952311 . - . ID=Thaps24733.4;Parent=Thaps24733;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 952401 952475 . - 0 ID=Thaps24733;Parent=Thaps24733;rank=3 chr13 . exon 952401 952475 . - . ID=Thaps24733.3;Parent=Thaps24733;constitutive=1;rank=3 chr13 . CDS 952563 954244 . - 0 ID=Thaps24733;Parent=Thaps24733;rank=2 chr13 . exon 952563 954244 . - . ID=Thaps24733.2;Parent=Thaps24733;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 954339 955805 . - 0 ID=Thaps24733;Parent=Thaps24733;rank=1 chr13 ensembl protein_coding_gene 945167 946652 . - . ID=Thaps269710;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBV4];external_name=Thaps269710;logic_name=jgi_thaps3 chr13 ensembl transcript 945167 946652 . - . ID=Thaps269710;Parent=Thaps269710;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 945167 945552 . - 0 ID=Thaps269710;Parent=Thaps269710;rank=4 chr13 . exon 945167 945552 . - . ID=Thaps269710.4;Parent=Thaps269710;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 945734 945824 . - 0 ID=Thaps269710;Parent=Thaps269710;rank=3 chr13 . exon 945734 945824 . - . ID=Thaps269710.3;Parent=Thaps269710;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 945888 946015 . - 0 ID=Thaps269710;Parent=Thaps269710;rank=2 chr13 . exon 945888 946015 . - . ID=Thaps269710.2;Parent=Thaps269710;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 946070 946652 . - 0 ID=Thaps269710;Parent=Thaps269710;rank=1 chr13 . exon 946070 946652 . - . ID=Thaps269710.1;Parent=Thaps269710;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 948774 950159 . + . ID=Thaps42283;biotype=protein_coding;description=RabGAP [Source:UniProtKB/TrEMBL%3BAcc:B8CBV5];external_name=Thaps42283;logic_name=jgi_thaps3 chr13 ensembl transcript 948774 950159 . + . ID=Thaps42283;Parent=Thaps42283;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 948774 948871 . + 0 ID=Thaps42283;Parent=Thaps42283;rank=1 chr13 . exon 948774 948871 . + . ID=Thaps42283.1;Parent=Thaps42283;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 948986 949077 . + 0 ID=Thaps42283;Parent=Thaps42283;rank=2 chr13 . exon 948986 949077 . + . ID=Thaps42283.2;Parent=Thaps42283;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 949546 949615 . + 0 ID=Thaps42283;Parent=Thaps42283;rank=3 chr13 . exon 949546 949615 . + . ID=Thaps42283.3;Parent=Thaps42283;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 949700 950159 . + 0 ID=Thaps42283;Parent=Thaps42283;rank=4 chr13 . exon 949700 950159 . + . ID=Thaps42283.4;Parent=Thaps42283;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . repeat_region 955309 955359 . ? . description=dust chr13 . repeat_region 957118 957148 . ? . description=trf chr13 . repeat_region 957376 957428 . ? . description=dust chr13 . repeat_region 960711 960718 . ? . description=dust chr13 . repeat_region 960872 960894 . ? . description=trf chr13 . exon 954339 955805 . - . ID=Thaps24733.1;Parent=Thaps24733;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 957098 957670 . - . ID=Thaps24734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBV8];external_name=Thaps24734;logic_name=jgi_thaps3 chr13 ensembl transcript 957098 957670 . - . ID=Thaps24734;Parent=Thaps24734;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 957098 957670 . - 0 ID=Thaps24734;Parent=Thaps24734;rank=1 chr13 . exon 957098 957670 . - . ID=Thaps24734.1;Parent=Thaps24734;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 960899 963281 . + . ID=Thaps24735;biotype=protein_coding;description=Multispanning membrane protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBW0];external_name=Thaps24735;logic_name=jgi_thaps3 chr13 ensembl transcript 960899 963281 . + . ID=Thaps24735;Parent=Thaps24735;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 960899 960993 . + 0 ID=Thaps24735;Parent=Thaps24735;rank=1 chr13 . exon 960899 960993 . + . ID=Thaps24735.1;Parent=Thaps24735;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 961373 961890 . + 0 ID=Thaps24735;Parent=Thaps24735;rank=2 chr13 . exon 961373 961890 . + . ID=Thaps24735.2;Parent=Thaps24735;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 961960 963281 . + 0 ID=Thaps24735;Parent=Thaps24735;rank=3 chr13 . exon 961960 963281 . + . ID=Thaps24735.3;Parent=Thaps24735;constitutive=1;ensembl_end_phase=2;rank=3 chr13 ensembl protein_coding_gene 958704 959719 . + . ID=Thaps9630;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBV9];external_name=Thaps9630;logic_name=jgi_thaps3 chr13 ensembl transcript 958704 959719 . + . ID=Thaps9630;Parent=Thaps9630;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 958704 958934 . + 0 ID=Thaps9630;Parent=Thaps9630;rank=1 chr13 . exon 958704 958934 . + . ID=Thaps9630.1;Parent=Thaps9630;constitutive=1;rank=1 chr13 . CDS 959033 959719 . + 0 ID=Thaps9630;Parent=Thaps9630;rank=2 chr13 . exon 959033 959719 . + . ID=Thaps9630.2;Parent=Thaps9630;constitutive=1;rank=2 chr13 ensembl protein_coding_gene 967271 968935 . + . ID=Thaps24736;biotype=protein_coding;description=Receptor mediated endocytosis protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBW3];external_name=Thaps24736;logic_name=jgi_thaps3 chr13 ensembl transcript 967271 968935 . + . ID=Thaps24736;Parent=Thaps24736;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 967271 968935 . + 0 ID=Thaps24736;Parent=Thaps24736;rank=1 chr13 . exon 967271 968935 . + . ID=Thaps24736.1;Parent=Thaps24736;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 963938 964438 . + . ID=Thaps9632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBW1];external_name=Thaps9632;logic_name=jgi_thaps3 chr13 ensembl transcript 963938 964438 . + . ID=Thaps9632;Parent=Thaps9632;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 963938 964438 . + 0 ID=Thaps9632;Parent=Thaps9632;rank=1 chr13 . exon 963938 964438 . + . ID=Thaps9632.1;Parent=Thaps9632;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 965119 965613 . + . ID=Thaps9633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBW2];external_name=Thaps9633;logic_name=jgi_thaps3 chr13 ensembl transcript 965119 965613 . + . ID=Thaps9633;Parent=Thaps9633;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 965119 965613 . + 0 ID=Thaps9633;Parent=Thaps9633;rank=1 chr13 . exon 965119 965613 . + . ID=Thaps9633.1;Parent=Thaps9633;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 969910 973427 . + . ID=Thaps9635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBW4];external_name=Thaps9635;logic_name=jgi_thaps3 chr13 ensembl transcript 969910 973427 . + . ID=Thaps9635;Parent=Thaps9635;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 969910 970008 . + 0 ID=Thaps9635;Parent=Thaps9635;rank=1 chr13 . exon 969910 970008 . + . ID=Thaps9635.1;Parent=Thaps9635;constitutive=1;rank=1 chr13 . CDS 970083 970118 . + 0 ID=Thaps9635;Parent=Thaps9635;rank=2 chr13 . exon 970083 970118 . + . ID=Thaps9635.2;Parent=Thaps9635;constitutive=1;rank=2 chr13 . CDS 970421 970729 . + 0 ID=Thaps9635;Parent=Thaps9635;rank=3 chr13 . exon 970421 970729 . + . ID=Thaps9635.3;Parent=Thaps9635;constitutive=1;rank=3 chr13 . CDS 970958 971420 . + 0 ID=Thaps9635;Parent=Thaps9635;rank=4 chr13 . exon 970958 971420 . + . ID=Thaps9635.4;Parent=Thaps9635;constitutive=1;ensembl_end_phase=1;rank=4 chr13 . CDS 971526 972397 . + 0 ID=Thaps9635;Parent=Thaps9635;rank=5 chr13 . exon 971526 972397 . + . ID=Thaps9635.5;Parent=Thaps9635;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 972690 973427 . + 0 ID=Thaps9635;Parent=Thaps9635;rank=6 chr13 . exon 972690 973427 . + . ID=Thaps9635.6;Parent=Thaps9635;constitutive=1;rank=6 chr13 . repeat_region 978653 978682 . ? . description=dust chr13 . repeat_region 978663 978682 . ? . description=trf chr13 . repeat_region 979039 979059 . ? . description=trf chr13 ensembl protein_coding_gene 980962 982554 . - . ID=Thaps24738;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBW7];external_name=Thaps24738;logic_name=jgi_thaps3 chr13 ensembl transcript 980962 982554 . - . ID=Thaps24738;Parent=Thaps24738;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 980962 981902 . - 0 ID=Thaps24738;Parent=Thaps24738;rank=3 chr13 . exon 980962 981902 . - . ID=Thaps24738.3;Parent=Thaps24738;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 981991 982244 . - 0 ID=Thaps24738;Parent=Thaps24738;rank=2 chr13 . exon 981991 982244 . - . ID=Thaps24738.2;Parent=Thaps24738;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 982328 982554 . - 0 ID=Thaps24738;Parent=Thaps24738;rank=1 chr13 . exon 982328 982554 . - . ID=Thaps24738.1;Parent=Thaps24738;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 977361 978777 . - . ID=Thaps264081;biotype=protein_coding;description=Cleavage and polyadenylation specificity factor [Source:UniProtKB/TrEMBL%3BAcc:B8CBW6];external_name=Thaps264081;logic_name=jgi_thaps3 chr13 ensembl transcript 977361 978777 . - . ID=Thaps264081;Parent=Thaps264081;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 977361 977644 . - 0 ID=Thaps264081;Parent=Thaps264081;rank=6 chr13 . exon 977361 977644 . - . ID=Thaps264081.6;Parent=Thaps264081;constitutive=1;ensembl_end_phase=2;rank=6 chr13 . CDS 977722 977882 . - 0 ID=Thaps264081;Parent=Thaps264081;rank=5 chr13 . exon 977722 977882 . - . ID=Thaps264081.5;Parent=Thaps264081;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 977988 978208 . - 0 ID=Thaps264081;Parent=Thaps264081;rank=4 chr13 . exon 977988 978208 . - . ID=Thaps264081.4;Parent=Thaps264081;constitutive=1;ensembl_end_phase=2;rank=4 chr13 . CDS 978299 978491 . - 0 ID=Thaps264081;Parent=Thaps264081;rank=3 chr13 . exon 978299 978491 . - . ID=Thaps264081.3;Parent=Thaps264081;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 978564 978651 . - 0 ID=Thaps264081;Parent=Thaps264081;rank=2 chr13 . exon 978564 978651 . - . ID=Thaps264081.2;Parent=Thaps264081;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 978685 978777 . - 0 ID=Thaps264081;Parent=Thaps264081;rank=1 chr13 . exon 978685 978777 . - . ID=Thaps264081.1;Parent=Thaps264081;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 973899 975251 . + . ID=Thaps9636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBW5];external_name=Thaps9636;logic_name=jgi_thaps3 chr13 ensembl transcript 973899 975251 . + . ID=Thaps9636;Parent=Thaps9636;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 973899 974253 . + 0 ID=Thaps9636;Parent=Thaps9636;rank=1 chr13 . exon 973899 974253 . + . ID=Thaps9636.1;Parent=Thaps9636;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 974359 975251 . + 0 ID=Thaps9636;Parent=Thaps9636;rank=2 chr13 . exon 974359 975251 . + . ID=Thaps9636.2;Parent=Thaps9636;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . biological_region 985967 985972 0.999 + . logic_name=eponine chr13 . biological_region 986467 986471 0.999 - . logic_name=eponine chr13 ensembl protein_coding_gene 987850 988197 . + . ID=Thaps19034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBW9];external_name=Thaps19034;logic_name=jgi_thaps3 chr13 ensembl transcript 987850 988197 . + . ID=Thaps19034;Parent=Thaps19034;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 987850 988197 . + 0 ID=Thaps19034;Parent=Thaps19034;rank=1 chr13 . exon 987850 988197 . + . ID=Thaps19034.1;Parent=Thaps19034;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 983060 986302 . - . ID=Thaps269714;biotype=protein_coding;description=ATP sulfurylase [Source:UniProtKB/TrEMBL%3BAcc:B8CBW8];external_name=Thaps269714;logic_name=jgi_thaps3 chr13 ensembl transcript 983060 986302 . - . ID=Thaps269714;Parent=Thaps269714;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 983060 983723 . - 0 ID=Thaps269714;Parent=Thaps269714;rank=5 chr13 . exon 983060 983723 . - . ID=Thaps269714.5;Parent=Thaps269714;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . CDS 983814 984350 . - 0 ID=Thaps269714;Parent=Thaps269714;rank=4 chr13 . exon 983814 984350 . - . ID=Thaps269714.4;Parent=Thaps269714;constitutive=1;rank=4 chr13 . CDS 984450 985009 . - 0 ID=Thaps269714;Parent=Thaps269714;rank=3 chr13 . exon 984450 985009 . - . ID=Thaps269714.3;Parent=Thaps269714;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 985082 985297 . - 0 ID=Thaps269714;Parent=Thaps269714;rank=2 chr13 . exon 985082 985297 . - . ID=Thaps269714.2;Parent=Thaps269714;constitutive=1;rank=2 chr13 . CDS 985376 986302 . - 0 ID=Thaps269714;Parent=Thaps269714;rank=1 chr13 . exon 985376 986302 . - . ID=Thaps269714.1;Parent=Thaps269714;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 988259 989505 . + . ID=Thaps269717;biotype=protein_coding;description=HSP70 domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBX0];external_name=Thaps269717;logic_name=jgi_thaps3 chr13 ensembl transcript 988259 989505 . + . ID=Thaps269717;Parent=Thaps269717;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 988259 988337 . + 0 ID=Thaps269717;Parent=Thaps269717;rank=1 chr13 . exon 988259 988337 . + . ID=Thaps269717.1;Parent=Thaps269717;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 988553 988665 . + 0 ID=Thaps269717;Parent=Thaps269717;rank=2 chr13 . exon 988553 988665 . + . ID=Thaps269717.2;Parent=Thaps269717;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 989095 989505 . + 0 ID=Thaps269717;Parent=Thaps269717;rank=3 chr13 . exon 989095 989505 . + . ID=Thaps269717.3;Parent=Thaps269717;constitutive=1;rank=3 chr13 ensembl protein_coding_gene 992470 993525 . - . ID=Thaps9642;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBX1];external_name=Thaps9642;logic_name=jgi_thaps3 chr13 ensembl transcript 992470 993525 . - . ID=Thaps9642;Parent=Thaps9642;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 992470 993525 . - 0 ID=Thaps9642;Parent=Thaps9642;rank=1 chr13 . exon 992470 993525 . - . ID=Thaps9642.1;Parent=Thaps9642;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 999632 1003170 . + . ID=Thaps269718;biotype=protein_coding;description=2-oxoglutarate dehydrogenase E1 component [Source:UniProtKB/TrEMBL%3BAcc:B8CBX3];external_name=Thaps269718;logic_name=jgi_thaps3 chr13 ensembl transcript 999632 1003170 . + . ID=Thaps269718;Parent=Thaps269718;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 999632 999920 . + 0 ID=Thaps269718;Parent=Thaps269718;rank=1 chr13 . exon 999632 999920 . + . ID=Thaps269718.1;Parent=Thaps269718;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . CDS 1000108 1000197 . + 0 ID=Thaps269718;Parent=Thaps269718;rank=2 chr13 . exon 1000108 1000197 . + . ID=Thaps269718.2;Parent=Thaps269718;constitutive=1;rank=2 chr13 . CDS 1000231 1000844 . + 0 ID=Thaps269718;Parent=Thaps269718;rank=3 chr13 . exon 1000231 1000844 . + . ID=Thaps269718.3;Parent=Thaps269718;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 1000954 1002636 . + 0 ID=Thaps269718;Parent=Thaps269718;rank=4 chr13 . exon 1000954 1002636 . + . ID=Thaps269718.4;Parent=Thaps269718;constitutive=1;rank=4 chr13 . CDS 1002717 1002898 . + 0 ID=Thaps269718;Parent=Thaps269718;rank=5 chr13 . CDS 1002981 1003170 . + 0 ID=Thaps269718;Parent=Thaps269718;rank=6 chr13 ensembl protein_coding_gene 995419 998095 . - . ID=Thaps9643;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBX2];external_name=Thaps9643;logic_name=jgi_thaps3 chr13 ensembl transcript 995419 998095 . - . ID=Thaps9643;Parent=Thaps9643;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 995419 996792 . - 0 ID=Thaps9643;Parent=Thaps9643;rank=2 chr13 . exon 995419 996792 . - . ID=Thaps9643.2;Parent=Thaps9643;constitutive=1;rank=2 chr13 . CDS 996917 998095 . - 0 ID=Thaps9643;Parent=Thaps9643;rank=1 chr13 . exon 996917 998095 . - . ID=Thaps9643.1;Parent=Thaps9643;constitutive=1;rank=1 chr13 . repeat_region 1006029 1006037 . ? . description=dust chr13 . repeat_region 1007121 1007420 . ? . description=trf chr13 . repeat_region 1009402 1009587 . - . description=Gypsy1ALTR_TP chr13 . repeat_region 1009588 1009809 . - . description=Gypsy1I_TP chr13 . repeat_region 1009827 1009971 . ? . description=trf chr13 . repeat_region 1009828 1010013 . ? . description=trf chr13 . repeat_region 1009863 1010012 . ? . description=trf chr13 . repeat_region 1010637 1010677 . + . description=Harbinger1_TP chr13 . repeat_region 1010653 1014204 . - . description=Harbinger1_TP chr13 . repeat_region 1012208 1012289 . ? . description=trf chr13 ensembl protein_coding_gene 1004773 1005588 . - . ID=Thaps24744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBX4];external_name=Thaps24744;logic_name=jgi_thaps3 chr13 ensembl transcript 1004773 1005588 . - . ID=Thaps24744;Parent=Thaps24744;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1004773 1005588 . - 0 ID=Thaps24744;Parent=Thaps24744;rank=1 chr13 . exon 1004773 1005588 . - . ID=Thaps24744.1;Parent=Thaps24744;constitutive=1;rank=1 chr13 . exon 1002717 1002898 . + . ID=Thaps269718.5;Parent=Thaps269718;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . exon 1002981 1003170 . + . ID=Thaps269718.6;Parent=Thaps269718;constitutive=1;ensembl_end_phase=1;rank=6 chr13 ensembl protein_coding_gene 1006009 1006940 . - . ID=Thaps9647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBX5];external_name=Thaps9647;logic_name=jgi_thaps3 chr13 ensembl transcript 1006009 1006940 . - . ID=Thaps9647;Parent=Thaps9647;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1006009 1006379 . - 0 ID=Thaps9647;Parent=Thaps9647;rank=3 chr13 . exon 1006009 1006379 . - . ID=Thaps9647.3;Parent=Thaps9647;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 1006415 1006473 . - 0 ID=Thaps9647;Parent=Thaps9647;rank=2 chr13 . exon 1006415 1006473 . - . ID=Thaps9647.2;Parent=Thaps9647;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 1006552 1006940 . - 0 ID=Thaps9647;Parent=Thaps9647;rank=1 chr13 . exon 1006552 1006940 . - . ID=Thaps9647.1;Parent=Thaps9647;constitutive=1;ensembl_end_phase=2;rank=1 chr13 ensembl protein_coding_gene 1007840 1008778 . + . ID=Thaps9648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBX6];external_name=Thaps9648;logic_name=jgi_thaps3 chr13 ensembl transcript 1007840 1008778 . + . ID=Thaps9648;Parent=Thaps9648;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1007840 1008349 . + 0 ID=Thaps9648;Parent=Thaps9648;rank=1 chr13 . exon 1007840 1008349 . + . ID=Thaps9648.1;Parent=Thaps9648;constitutive=1;rank=1 chr13 . CDS 1008445 1008479 . + 0 ID=Thaps9648;Parent=Thaps9648;rank=2 chr13 . exon 1008445 1008479 . + . ID=Thaps9648.2;Parent=Thaps9648;constitutive=1;ensembl_end_phase=2;rank=2 chr13 . CDS 1008598 1008778 . + 0 ID=Thaps9648;Parent=Thaps9648;rank=3 chr13 . exon 1008598 1008778 . + . ID=Thaps9648.3;Parent=Thaps9648;constitutive=1;ensembl_end_phase=1;rank=3 chr13 ensembl protein_coding_gene 1015630 1022146 . - . ID=Thaps9649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBX7];external_name=Thaps9649;logic_name=jgi_thaps3 chr13 ensembl transcript 1015630 1022146 . - . ID=Thaps9649;Parent=Thaps9649;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1015630 1016332 . - 0 ID=Thaps9649;Parent=Thaps9649;rank=3 chr13 . exon 1015630 1016332 . - . ID=Thaps9649.3;Parent=Thaps9649;constitutive=1;ensembl_end_phase=1;rank=3 chr13 . CDS 1016427 1017723 . - 0 ID=Thaps9649;Parent=Thaps9649;rank=2 chr13 . exon 1016427 1017723 . - . ID=Thaps9649.2;Parent=Thaps9649;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 1017808 1022146 . - 0 ID=Thaps9649;Parent=Thaps9649;rank=1 chr13 . exon 1017808 1022146 . - . ID=Thaps9649.1;Parent=Thaps9649;constitutive=1;ensembl_end_phase=1;rank=1 chr13 ensembl protein_coding_gene 1022450 1024426 . - . ID=Thaps9650;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBX8];external_name=Thaps9650;logic_name=jgi_thaps3 chr13 ensembl transcript 1022450 1024426 . - . ID=Thaps9650;Parent=Thaps9650;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1022450 1024426 . - 0 ID=Thaps9650;Parent=Thaps9650;rank=1 chr13 . exon 1022450 1024426 . - . ID=Thaps9650.1;Parent=Thaps9650;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 1029012 1030294 . + . ID=Thaps264090;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBX9];external_name=Thaps264090;logic_name=jgi_thaps3 chr13 ensembl transcript 1029012 1030294 . + . ID=Thaps264090;Parent=Thaps264090;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1029012 1029239 . + 0 ID=Thaps264090;Parent=Thaps264090;rank=1 chr13 . exon 1029012 1029239 . + . ID=Thaps264090.1;Parent=Thaps264090;constitutive=1;rank=1 chr13 . CDS 1029344 1029797 . + 0 ID=Thaps264090;Parent=Thaps264090;rank=2 chr13 . exon 1029344 1029797 . + . ID=Thaps264090.2;Parent=Thaps264090;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . CDS 1029844 1029972 . + 0 ID=Thaps264090;Parent=Thaps264090;rank=3 chr13 . exon 1029844 1029972 . + . ID=Thaps264090.3;Parent=Thaps264090;constitutive=1;rank=3 chr13 . CDS 1030057 1030294 . + 0 ID=Thaps264090;Parent=Thaps264090;rank=4 chr13 . exon 1030057 1030294 . + . ID=Thaps264090.4;Parent=Thaps264090;constitutive=1;ensembl_end_phase=1;rank=4 chr13 ensembl protein_coding_gene 1031266 1033373 . - . ID=Thaps9652;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY0];external_name=Thaps9652;logic_name=jgi_thaps3 chr13 ensembl transcript 1031266 1033373 . - . ID=Thaps9652;Parent=Thaps9652;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1031266 1031451 . - 0 ID=Thaps9652;Parent=Thaps9652;rank=3 chr13 . exon 1031266 1031451 . - . ID=Thaps9652.3;Parent=Thaps9652;constitutive=1;rank=3 chr13 . CDS 1031537 1032358 . - 0 ID=Thaps9652;Parent=Thaps9652;rank=2 chr13 . exon 1031537 1032358 . - . ID=Thaps9652.2;Parent=Thaps9652;constitutive=1;rank=2 chr13 . CDS 1032471 1033373 . - 0 ID=Thaps9652;Parent=Thaps9652;rank=1 chr13 . repeat_region 1033529 1033832 . - . description=TE2c_TP chr13 . repeat_region 1033696 1033754 . ? . description=trf chr13 . repeat_region 1033870 1034266 . - . description=TE2c_TP chr13 . repeat_region 1034195 1034264 . ? . description=trf chr13 . repeat_region 1034805 1035023 . + . description=tp13_ASNotSingleton chr13 . repeat_region 1035646 1035834 . - . description=TE2c_TP chr13 . repeat_region 1035664 1035671 . ? . description=dust chr13 . repeat_region 1035672 1035878 . + . description=TE2c_TP chr13 . repeat_region 1037657 1037730 . ? . description=trf chr13 . repeat_region 1039682 1039702 . ? . description=trf chr13 ensembl gene 1034275 1035435 . + . ID=Thaps264091;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr13 ensembl transcript 1034275 1035435 . + . ID=Thaps264091;Parent=Thaps264091;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr13 . exon 1034275 1035018 . + . ID=Thaps264091.1;Parent=Thaps264091;constitutive=1;rank=1 chr13 . exon 1035160 1035352 . + . ID=Thaps264091.2;Parent=Thaps264091;constitutive=1;ensembl_end_phase=1;rank=2 chr13 . exon 1035424 1035435 . + . ID=Thaps264091.3;Parent=Thaps264091;constitutive=1;rank=3 chr13 . exon 1032471 1033373 . - . ID=Thaps9652.1;Parent=Thaps9652;constitutive=1;rank=1 chr13 ensembl protein_coding_gene 1037895 1043880 . + . ID=Thaps9653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY1];external_name=Thaps9653;logic_name=jgi_thaps3 chr13 ensembl transcript 1037895 1043880 . + . ID=Thaps9653;Parent=Thaps9653;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1037895 1038577 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=1 chr13 . exon 1037895 1038577 . + . ID=Thaps9653.1;Parent=Thaps9653;constitutive=1;ensembl_end_phase=2;rank=1 chr13 . CDS 1038667 1039350 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=2 chr13 . exon 1038667 1039350 . + . ID=Thaps9653.2;Parent=Thaps9653;constitutive=1;rank=2 chr13 . CDS 1039434 1039631 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=3 chr13 . exon 1039434 1039631 . + . ID=Thaps9653.3;Parent=Thaps9653;constitutive=1;rank=3 chr13 . CDS 1039723 1039824 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=4 chr13 . exon 1039723 1039824 . + . ID=Thaps9653.4;Parent=Thaps9653;constitutive=1;rank=4 chr13 . CDS 1039969 1040008 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=5 chr13 . exon 1039969 1040008 . + . ID=Thaps9653.5;Parent=Thaps9653;constitutive=1;ensembl_end_phase=1;rank=5 chr13 . CDS 1040087 1041132 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=6 chr13 . exon 1040087 1041132 . + . ID=Thaps9653.6;Parent=Thaps9653;constitutive=1;ensembl_end_phase=2;rank=6 chr13 . CDS 1041207 1041259 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=7 chr13 . exon 1041207 1041259 . + . ID=Thaps9653.7;Parent=Thaps9653;constitutive=1;ensembl_end_phase=2;rank=7 chr13 . CDS 1041329 1041662 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=8 chr13 . exon 1041329 1041662 . + . ID=Thaps9653.8;Parent=Thaps9653;constitutive=1;ensembl_end_phase=1;rank=8 chr13 . CDS 1041764 1041797 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=9 chr13 . exon 1041764 1041797 . + . ID=Thaps9653.9;Parent=Thaps9653;constitutive=1;ensembl_end_phase=1;rank=9 chr13 . CDS 1041871 1042041 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=10 chr13 . exon 1041871 1042041 . + . ID=Thaps9653.10;Parent=Thaps9653;constitutive=1;rank=10 chr13 . CDS 1042198 1042281 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=11 chr13 . exon 1042198 1042281 . + . ID=Thaps9653.11;Parent=Thaps9653;constitutive=1;rank=11 chr13 . CDS 1042565 1043790 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=12 chr13 . CDS 1043862 1043880 . + 0 ID=Thaps9653;Parent=Thaps9653;rank=13 chr13 . repeat_region 1050174 1050528 . + . description=Copia5ALTR_TP chr13 ensembl protein_coding_gene 1044369 1045771 . - . ID=Thaps14700;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY2];external_name=Thaps14700;logic_name=jgi_thaps3 chr13 ensembl transcript 1044369 1045771 . - . ID=Thaps14700;Parent=Thaps14700;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1044369 1044639 . - 0 ID=Thaps14700;Parent=Thaps14700;rank=6 chr13 . exon 1044369 1044639 . - . ID=Thaps14700.6;Parent=Thaps14700;constitutive=1;ensembl_end_phase=1;rank=6 chr13 . CDS 1044722 1044804 . - 0 ID=Thaps14700;Parent=Thaps14700;rank=5 chr13 . exon 1044722 1044804 . - . ID=Thaps14700.5;Parent=Thaps14700;constitutive=1;ensembl_end_phase=2;rank=5 chr13 . CDS 1044923 1045045 . - 0 ID=Thaps14700;Parent=Thaps14700;rank=4 chr13 . exon 1044923 1045045 . - . ID=Thaps14700.4;Parent=Thaps14700;constitutive=1;rank=4 chr13 . CDS 1045124 1045362 . - 0 ID=Thaps14700;Parent=Thaps14700;rank=3 chr13 . exon 1045124 1045362 . - . ID=Thaps14700.3;Parent=Thaps14700;constitutive=1;ensembl_end_phase=2;rank=3 chr13 . CDS 1045444 1045605 . - 0 ID=Thaps14700;Parent=Thaps14700;rank=2 chr13 . exon 1045444 1045605 . - . ID=Thaps14700.2;Parent=Thaps14700;constitutive=1;rank=2 chr13 . CDS 1045699 1045771 . - 0 ID=Thaps14700;Parent=Thaps14700;rank=1 chr13 . exon 1045699 1045771 . - . ID=Thaps14700.1;Parent=Thaps14700;constitutive=1;ensembl_end_phase=1;rank=1 chr13 . exon 1042565 1043790 . + . ID=Thaps9653.12;Parent=Thaps9653;constitutive=1;ensembl_end_phase=2;rank=12 chr13 . exon 1043862 1043880 . + . ID=Thaps9653.13;Parent=Thaps9653;constitutive=1;ensembl_end_phase=1;rank=13 chr13 ensembl protein_coding_gene 1049813 1051655 . + . ID=Thaps9655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CBY3];external_name=Thaps9655;logic_name=jgi_thaps3 chr13 ensembl transcript 1049813 1051655 . + . ID=Thaps9655;Parent=Thaps9655;biotype=protein_coding;logic_name=jgi_thaps3 chr13 . CDS 1049813 1050160 . + 0 ID=Thaps9655;Parent=Thaps9655;rank=1 chr13 . exon 1049813 1050160 . + . ID=Thaps9655.1;Parent=Thaps9655;constitutive=1;rank=1 chr13 . CDS 1050571 1050684 . + 0 ID=Thaps9655;Parent=Thaps9655;rank=2 chr13 . exon 1050571 1050684 . + . ID=Thaps9655.2;Parent=Thaps9655;constitutive=1;rank=2 chr13 . CDS 1050944 1051201 . + 0 ID=Thaps9655;Parent=Thaps9655;rank=3 chr13 . exon 1050944 1051201 . + . ID=Thaps9655.3;Parent=Thaps9655;constitutive=1;rank=3 chr13 . CDS 1051288 1051374 . + 0 ID=Thaps9655;Parent=Thaps9655;rank=4 chr13 . exon 1051288 1051374 . + . ID=Thaps9655.4;Parent=Thaps9655;constitutive=1;rank=4 chr13 . CDS 1051458 1051655 . + 0 ID=Thaps9655;Parent=Thaps9655;rank=5 chr13 . exon 1051458 1051655 . + . ID=Thaps9655.5;Parent=Thaps9655;constitutive=1;rank=5 ##gff-version 3 ##sequence-region 22 1 1057565 chr22 . repeat_region 7330 7781 . ? . description=trf chr22 ensembl protein_coding_gene 1794 3594 . + . ID=Thaps11656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF62];external_name=Thaps11656;logic_name=jgi_thaps3 chr22 ensembl transcript 1794 3594 . + . ID=Thaps11656;Parent=Thaps11656;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1794 3051 . + 0 ID=Thaps11656;Parent=Thaps11656;rank=1 chr22 . exon 1794 3051 . + . ID=Thaps11656.1;Parent=Thaps11656;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 3158 3594 . + 0 ID=Thaps11656;Parent=Thaps11656;rank=2 chr22 . exon 3158 3594 . + . ID=Thaps11656.2;Parent=Thaps11656;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 3954 4154 . - . ID=Thaps264748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF63];external_name=Thaps264748;logic_name=jgi_thaps3 chr22 ensembl transcript 3954 4154 . - . ID=Thaps264748;Parent=Thaps264748;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 3954 4154 . - 0 ID=Thaps264748;Parent=Thaps264748;rank=1 chr22 . exon 3954 4154 . - . ID=Thaps264748.1;Parent=Thaps264748;constitutive=1;rank=1 chr22 . repeat_region 13569 13605 . ? . description=dust chr22 . repeat_region 14292 14317 . ? . description=dust chr22 ensembl protein_coding_gene 14237 15399 . + . ID=Thaps11659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF65];external_name=Thaps11659;logic_name=jgi_thaps3 chr22 ensembl transcript 14237 15399 . + . ID=Thaps11659;Parent=Thaps11659;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 14237 14263 . + 0 ID=Thaps11659;Parent=Thaps11659;rank=1 chr22 . exon 14237 14263 . + . ID=Thaps11659.1;Parent=Thaps11659;constitutive=1;rank=1 chr22 . CDS 14434 15399 . + 0 ID=Thaps11659;Parent=Thaps11659;rank=2 chr22 . exon 14434 15399 . + . ID=Thaps11659.2;Parent=Thaps11659;constitutive=1;rank=2 chr22 ensembl protein_coding_gene 17338 18838 . - . ID=Thaps11660;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF66];external_name=Thaps11660;logic_name=jgi_thaps3 chr22 ensembl transcript 17338 18838 . - . ID=Thaps11660;Parent=Thaps11660;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 17338 18381 . - 0 ID=Thaps11660;Parent=Thaps11660;rank=2 chr22 . exon 17338 18381 . - . ID=Thaps11660.2;Parent=Thaps11660;constitutive=1;rank=2 chr22 . CDS 18506 18838 . - 0 ID=Thaps11660;Parent=Thaps11660;rank=1 chr22 . exon 18506 18838 . - . ID=Thaps11660.1;Parent=Thaps11660;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 11235 11431 . + . ID=Thaps264751;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF64];external_name=Thaps264751;logic_name=jgi_thaps3 chr22 ensembl transcript 11235 11431 . + . ID=Thaps264751;Parent=Thaps264751;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 11235 11431 . + 0 ID=Thaps264751;Parent=Thaps264751;rank=1 chr22 . exon 11235 11431 . + . ID=Thaps264751.1;Parent=Thaps264751;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . repeat_region 22574 22598 . ? . description=trf chr22 ensembl protein_coding_gene 22232 23246 . - . ID=Thaps264753;biotype=protein_coding;description=Predicted proteinPyruvate formate-lyase [Source:UniProtKB/TrEMBL%3BAcc:B8LBJ3];external_name=Thaps264753;logic_name=jgi_thaps3 chr22 ensembl transcript 22232 23246 . - . ID=Thaps264753;Parent=Thaps264753;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 22232 22564 . - 0 ID=Thaps264753;Parent=Thaps264753;rank=5 chr22 . exon 22232 22564 . - . ID=Thaps264753.5;Parent=Thaps264753;constitutive=1;rank=5 chr22 . CDS 22656 22769 . - 0 ID=Thaps264753;Parent=Thaps264753;rank=4 chr22 . exon 22656 22769 . - . ID=Thaps264753.4;Parent=Thaps264753;constitutive=1;rank=4 chr22 . CDS 22847 22989 . - 0 ID=Thaps264753;Parent=Thaps264753;rank=3 chr22 . exon 22847 22989 . - . ID=Thaps264753.3;Parent=Thaps264753;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 23065 23100 . - 0 ID=Thaps264753;Parent=Thaps264753;rank=2 chr22 . exon 23065 23100 . - . ID=Thaps264753.2;Parent=Thaps264753;constitutive=1;rank=2 chr22 . CDS 23180 23246 . - 0 ID=Thaps264753;Parent=Thaps264753;rank=1 chr22 . exon 23180 23246 . - . ID=Thaps264753.1;Parent=Thaps264753;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 29666 30725 . + . ID=Thaps264757;biotype=protein_coding;description=Predicted proteinPyruvate formate-lyase [Source:UniProtKB/TrEMBL%3BAcc:B8LBJ6];external_name=Thaps264757;logic_name=jgi_thaps3 chr22 ensembl transcript 29666 30725 . + . ID=Thaps264757;Parent=Thaps264757;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 29666 29726 . + 0 ID=Thaps264757;Parent=Thaps264757;rank=1 chr22 . exon 29666 29726 . + . ID=Thaps264757.1;Parent=Thaps264757;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 29800 29835 . + 0 ID=Thaps264757;Parent=Thaps264757;rank=2 chr22 . exon 29800 29835 . + . ID=Thaps264757.2;Parent=Thaps264757;constitutive=1;rank=2 chr22 . CDS 29921 30063 . + 0 ID=Thaps264757;Parent=Thaps264757;rank=3 chr22 . exon 29921 30063 . + . ID=Thaps264757.3;Parent=Thaps264757;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 30142 30261 . + 0 ID=Thaps264757;Parent=Thaps264757;rank=4 chr22 . CDS 30345 30725 . + 0 ID=Thaps264757;Parent=Thaps264757;rank=5 chr22 ensembl protein_coding_gene 27009 29518 . + . ID=Thaps38597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF70];external_name=Thaps38597;logic_name=jgi_thaps3 chr22 ensembl transcript 27009 29518 . + . ID=Thaps38597;Parent=Thaps38597;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 27009 27419 . + 0 ID=Thaps38597;Parent=Thaps38597;rank=1 chr22 . exon 27009 27419 . + . ID=Thaps38597.1;Parent=Thaps38597;constitutive=1;rank=1 chr22 . CDS 27527 28095 . + 0 ID=Thaps38597;Parent=Thaps38597;rank=2 chr22 . exon 27527 28095 . + . ID=Thaps38597.2;Parent=Thaps38597;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 28191 28811 . + 0 ID=Thaps38597;Parent=Thaps38597;rank=3 chr22 . exon 28191 28811 . + . ID=Thaps38597.3;Parent=Thaps38597;constitutive=1;rank=3 chr22 . CDS 28903 29518 . + 0 ID=Thaps38597;Parent=Thaps38597;rank=4 chr22 . exon 28903 29518 . + . ID=Thaps38597.4;Parent=Thaps38597;constitutive=1;ensembl_end_phase=1;rank=4 chr22 ensembl protein_coding_gene 20473 21713 . + . ID=Thaps38707;biotype=protein_coding;description=Transaldolase [Source:UniProtKB/TrEMBL%3BAcc:B8LBJ2];external_name=Thaps38707;logic_name=jgi_thaps3 chr22 ensembl transcript 20473 21713 . + . ID=Thaps38707;Parent=Thaps38707;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 20473 20872 . + 0 ID=Thaps38707;Parent=Thaps38707;rank=1 chr22 . exon 20473 20872 . + . ID=Thaps38707.1;Parent=Thaps38707;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 20954 21366 . + 0 ID=Thaps38707;Parent=Thaps38707;rank=2 chr22 . exon 20954 21366 . + . ID=Thaps38707.2;Parent=Thaps38707;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 21465 21713 . + 0 ID=Thaps38707;Parent=Thaps38707;rank=3 chr22 . exon 21465 21713 . + . ID=Thaps38707.3;Parent=Thaps38707;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 23406 25824 . - . ID=Thaps38760;biotype=protein_coding;description=Predicted proteinPyruvate formate-lyase [Source:UniProtKB/TrEMBL%3BAcc:B8LBJ4];external_name=Thaps38760;logic_name=jgi_thaps3 chr22 ensembl transcript 23406 25824 . - . ID=Thaps38760;Parent=Thaps38760;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 23406 24642 . - 0 ID=Thaps38760;Parent=Thaps38760;rank=3 chr22 . exon 23406 24642 . - . ID=Thaps38760.3;Parent=Thaps38760;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 24738 25306 . - 0 ID=Thaps38760;Parent=Thaps38760;rank=2 chr22 . exon 24738 25306 . - . ID=Thaps38760.2;Parent=Thaps38760;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 25414 25824 . - 0 ID=Thaps38760;Parent=Thaps38760;rank=1 chr22 . exon 25414 25824 . - . ID=Thaps38760.1;Parent=Thaps38760;constitutive=1;rank=1 chr22 . repeat_region 33752 33787 . ? . description=dust chr22 . repeat_region 33851 33887 . ? . description=dust chr22 . repeat_region 34246 34264 . ? . description=dust chr22 ensembl protein_coding_gene 30918 33752 . - . ID=Thaps11664;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF72];external_name=Thaps11664;logic_name=jgi_thaps3 chr22 ensembl transcript 30918 33752 . - . ID=Thaps11664;Parent=Thaps11664;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 30918 32258 . - 0 ID=Thaps11664;Parent=Thaps11664;rank=3 chr22 . exon 30918 32258 . - . ID=Thaps11664.3;Parent=Thaps11664;constitutive=1;rank=3 chr22 . CDS 32340 32682 . - 0 ID=Thaps11664;Parent=Thaps11664;rank=2 chr22 . exon 32340 32682 . - . ID=Thaps11664.2;Parent=Thaps11664;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 32770 33752 . - 0 ID=Thaps11664;Parent=Thaps11664;rank=1 chr22 . exon 32770 33752 . - . ID=Thaps11664.1;Parent=Thaps11664;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 34209 36252 . + . ID=Thaps11665;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF73];external_name=Thaps11665;logic_name=jgi_thaps3 chr22 ensembl transcript 34209 36252 . + . ID=Thaps11665;Parent=Thaps11665;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 34209 34735 . + 0 ID=Thaps11665;Parent=Thaps11665;rank=1 chr22 . exon 34209 34735 . + . ID=Thaps11665.1;Parent=Thaps11665;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 34757 35739 . + 0 ID=Thaps11665;Parent=Thaps11665;rank=2 chr22 . exon 34757 35739 . + . ID=Thaps11665.2;Parent=Thaps11665;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 35792 36252 . + 0 ID=Thaps11665;Parent=Thaps11665;rank=3 chr22 . exon 35792 36252 . + . ID=Thaps11665.3;Parent=Thaps11665;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 36946 41034 . - . ID=Thaps11666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF74];external_name=Thaps11666;logic_name=jgi_thaps3 chr22 ensembl transcript 36946 41034 . - . ID=Thaps11666;Parent=Thaps11666;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 36946 40522 . - 0 ID=Thaps11666;Parent=Thaps11666;rank=3 chr22 . exon 36946 40522 . - . ID=Thaps11666.3;Parent=Thaps11666;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 40703 40771 . - 0 ID=Thaps11666;Parent=Thaps11666;rank=2 chr22 . CDS 40892 41034 . - 0 ID=Thaps11666;Parent=Thaps11666;rank=1 chr22 . exon 30142 30261 . + . ID=Thaps264757.4;Parent=Thaps264757;constitutive=1;rank=4 chr22 . exon 30345 30725 . + . ID=Thaps264757.5;Parent=Thaps264757;constitutive=1;rank=5 chr22 . repeat_region 40196 40221 . ? . description=trf chr22 . repeat_region 41690 41737 . ? . description=trf chr22 . repeat_region 41698 41735 . ? . description=trf chr22 . repeat_region 41701 41737 . ? . description=trf chr22 . repeat_region 43798 43830 . ? . description=trf chr22 . exon 40703 40771 . - . ID=Thaps11666.2;Parent=Thaps11666;constitutive=1;rank=2 chr22 . exon 40892 41034 . - . ID=Thaps11666.1;Parent=Thaps11666;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 42754 44141 . - . ID=Thaps11667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF75];external_name=Thaps11667;logic_name=jgi_thaps3 chr22 ensembl transcript 42754 44141 . - . ID=Thaps11667;Parent=Thaps11667;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 42754 43763 . - 0 ID=Thaps11667;Parent=Thaps11667;rank=3 chr22 . exon 42754 43763 . - . ID=Thaps11667.3;Parent=Thaps11667;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 43888 43943 . - 0 ID=Thaps11667;Parent=Thaps11667;rank=2 chr22 . exon 43888 43943 . - . ID=Thaps11667.2;Parent=Thaps11667;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 44083 44141 . - 0 ID=Thaps11667;Parent=Thaps11667;rank=1 chr22 . exon 44083 44141 . - . ID=Thaps11667.1;Parent=Thaps11667;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 47038 48994 . + . ID=Thaps264759;biotype=protein_coding;description=Gamma-glutamyltransferasePredicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8LBK2];external_name=Thaps264759;logic_name=jgi_thaps3 chr22 ensembl transcript 47038 48994 . + . ID=Thaps264759;Parent=Thaps264759;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 47038 47129 . + 0 ID=Thaps264759;Parent=Thaps264759;rank=1 chr22 . exon 47038 47129 . + . ID=Thaps264759.1;Parent=Thaps264759;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 47216 48331 . + 0 ID=Thaps264759;Parent=Thaps264759;rank=2 chr22 . exon 47216 48331 . + . ID=Thaps264759.2;Parent=Thaps264759;constitutive=1;rank=2 chr22 . CDS 48408 48675 . + 0 ID=Thaps264759;Parent=Thaps264759;rank=3 chr22 . exon 48408 48675 . + . ID=Thaps264759.3;Parent=Thaps264759;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 48758 48994 . + 0 ID=Thaps264759;Parent=Thaps264759;rank=4 chr22 . exon 48758 48994 . + . ID=Thaps264759.4;Parent=Thaps264759;constitutive=1;rank=4 chr22 ensembl protein_coding_gene 45523 46791 . + . ID=Thaps38576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF76];external_name=Thaps38576;logic_name=jgi_thaps3 chr22 ensembl transcript 45523 46791 . + . ID=Thaps38576;Parent=Thaps38576;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 45523 46268 . + 0 ID=Thaps38576;Parent=Thaps38576;rank=1 chr22 . exon 45523 46268 . + . ID=Thaps38576.1;Parent=Thaps38576;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 46332 46791 . + 0 ID=Thaps38576;Parent=Thaps38576;rank=2 chr22 . exon 46332 46791 . + . ID=Thaps38576.2;Parent=Thaps38576;constitutive=1;ensembl_end_phase=1;rank=2 chr22 ensembl protein_coding_gene 55928 57024 . - . ID=Thaps11671;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF80];external_name=Thaps11671;logic_name=jgi_thaps3 chr22 ensembl transcript 55928 57024 . - . ID=Thaps11671;Parent=Thaps11671;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 55928 55936 . - 0 ID=Thaps11671;Parent=Thaps11671;rank=2 chr22 . exon 55928 55936 . - . ID=Thaps11671.2;Parent=Thaps11671;constitutive=1;rank=2 chr22 . CDS 56119 57024 . - 0 ID=Thaps11671;Parent=Thaps11671;rank=1 chr22 . exon 56119 57024 . - . ID=Thaps11671.1;Parent=Thaps11671;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 57757 58926 . + . ID=Thaps25681;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF81];external_name=Thaps25681;logic_name=jgi_thaps3 chr22 ensembl transcript 57757 58926 . + . ID=Thaps25681;Parent=Thaps25681;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 57757 58926 . + 0 ID=Thaps25681;Parent=Thaps25681;rank=1 chr22 . exon 57757 58926 . + . ID=Thaps25681.1;Parent=Thaps25681;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 54013 54690 . + . ID=Thaps38735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF79];external_name=Thaps38735;logic_name=jgi_thaps3 chr22 ensembl transcript 54013 54690 . + . ID=Thaps38735;Parent=Thaps38735;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 54013 54690 . + 0 ID=Thaps38735;Parent=Thaps38735;rank=1 chr22 . exon 54013 54690 . + . ID=Thaps38735.1;Parent=Thaps38735;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 51257 52744 . + . ID=Thaps38757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF78];external_name=Thaps38757;logic_name=jgi_thaps3 chr22 ensembl transcript 51257 52744 . + . ID=Thaps38757;Parent=Thaps38757;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 51257 51507 . + 0 ID=Thaps38757;Parent=Thaps38757;rank=1 chr22 . exon 51257 51507 . + . ID=Thaps38757.1;Parent=Thaps38757;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 51538 52484 . + 0 ID=Thaps38757;Parent=Thaps38757;rank=2 chr22 . exon 51538 52484 . + . ID=Thaps38757.2;Parent=Thaps38757;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 52524 52744 . + 0 ID=Thaps38757;Parent=Thaps38757;rank=3 chr22 . exon 52524 52744 . + . ID=Thaps38757.3;Parent=Thaps38757;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . repeat_region 59877 59923 . ? . description=trf chr22 . repeat_region 65155 65224 . ? . description=dust chr22 . repeat_region 66024 66032 . ? . description=dust chr22 . repeat_region 67508 67515 . ? . description=dust chr22 ensembl protein_coding_gene 69419 70768 . + . ID=Thaps11676;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF85];external_name=Thaps11676;logic_name=jgi_thaps3 chr22 ensembl transcript 69419 70768 . + . ID=Thaps11676;Parent=Thaps11676;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 69419 70768 . + 0 ID=Thaps11676;Parent=Thaps11676;rank=1 chr22 . exon 69419 70768 . + . ID=Thaps11676.1;Parent=Thaps11676;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 65073 65667 . - . ID=Thaps26467;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF83];external_name=Thaps26467;logic_name=jgi_thaps3 chr22 ensembl transcript 65073 65667 . - . ID=Thaps26467;Parent=Thaps26467;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 65073 65150 . - 0 ID=Thaps26467;Parent=Thaps26467;rank=3 chr22 . exon 65073 65150 . - . ID=Thaps26467.3;Parent=Thaps26467;constitutive=1;rank=3 chr22 . CDS 65347 65432 . - 0 ID=Thaps26467;Parent=Thaps26467;rank=2 chr22 . exon 65347 65432 . - . ID=Thaps26467.2;Parent=Thaps26467;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 65571 65667 . - 0 ID=Thaps26467;Parent=Thaps26467;rank=1 chr22 . exon 65571 65667 . - . ID=Thaps26467.1;Parent=Thaps26467;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 60037 60937 . + . ID=Thaps264761;biotype=protein_coding;description=ATP dependent DNA ligase [Source:UniProtKB/TrEMBL%3BAcc:B8CF82];external_name=LIGASEIV;logic_name=jgi_thaps3 chr22 ensembl transcript 60037 60937 . + . ID=Thaps264761;Parent=Thaps264761;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 60037 60470 . + 0 ID=Thaps264761;Parent=Thaps264761;rank=1 chr22 . exon 60037 60470 . + . ID=Thaps264761.1;Parent=Thaps264761;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 60490 60535 . + 0 ID=Thaps264761;Parent=Thaps264761;rank=2 chr22 . exon 60490 60535 . + . ID=Thaps264761.2;Parent=Thaps264761;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 60714 60937 . + 0 ID=Thaps264761;Parent=Thaps264761;rank=3 chr22 . exon 60714 60937 . + . ID=Thaps264761.3;Parent=Thaps264761;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl gene 61582 64353 . + . ID=Thaps264762;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr22 ensembl transcript 61582 64353 . + . ID=Thaps264762;Parent=Thaps264762;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr22 . exon 61582 61653 . + . ID=Thaps264762.1;Parent=Thaps264762;constitutive=1;rank=1 chr22 . exon 61795 61944 . + . ID=Thaps264762.2;Parent=Thaps264762;constitutive=1;rank=2 chr22 . exon 62152 62639 . + . ID=Thaps264762.3;Parent=Thaps264762;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . exon 62795 64353 . + . ID=Thaps264762.4;Parent=Thaps264762;constitutive=1;ensembl_end_phase=2;rank=4 chr22 ensembl protein_coding_gene 67570 69291 . - . ID=Thaps843;biotype=protein_coding;description=Rab-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF84];external_name=Thaps843;logic_name=jgi_thaps3 chr22 ensembl transcript 67570 69291 . - . ID=Thaps843;Parent=Thaps843;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 67570 67989 . - 0 ID=Thaps843;Parent=Thaps843;rank=4 chr22 . exon 67570 67989 . - . ID=Thaps843.4;Parent=Thaps843;constitutive=1;rank=4 chr22 . CDS 68092 68205 . - 0 ID=Thaps843;Parent=Thaps843;rank=3 chr22 . exon 68092 68205 . - . ID=Thaps843.3;Parent=Thaps843;constitutive=1;rank=3 chr22 . CDS 68606 68687 . - 0 ID=Thaps843;Parent=Thaps843;rank=2 chr22 . exon 68606 68687 . - . ID=Thaps843.2;Parent=Thaps843;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 69266 69291 . - 0 ID=Thaps843;Parent=Thaps843;rank=1 chr22 . exon 69266 69291 . - . ID=Thaps843.1;Parent=Thaps843;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 71909 73200 . - . ID=Thaps14225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF86];external_name=Thaps14225;logic_name=jgi_thaps3 chr22 ensembl transcript 71909 73200 . - . ID=Thaps14225;Parent=Thaps14225;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 71909 72470 . - 0 ID=Thaps14225;Parent=Thaps14225;rank=2 chr22 . exon 71909 72470 . - . ID=Thaps14225.2;Parent=Thaps14225;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 72602 73200 . - 0 ID=Thaps14225;Parent=Thaps14225;rank=1 chr22 . exon 72602 73200 . - . ID=Thaps14225.1;Parent=Thaps14225;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 75913 78495 . - . ID=Thaps38726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF87];external_name=Thaps38726;logic_name=jgi_thaps3 chr22 ensembl transcript 75913 78495 . - . ID=Thaps38726;Parent=Thaps38726;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 75913 76087 . - 0 ID=Thaps38726;Parent=Thaps38726;rank=3 chr22 . exon 75913 76087 . - . ID=Thaps38726.3;Parent=Thaps38726;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 77054 77570 . - 0 ID=Thaps38726;Parent=Thaps38726;rank=2 chr22 . exon 77054 77570 . - . ID=Thaps38726.2;Parent=Thaps38726;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 78210 78495 . - 0 ID=Thaps38726;Parent=Thaps38726;rank=1 chr22 . exon 78210 78495 . - . ID=Thaps38726.1;Parent=Thaps38726;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . repeat_region 86085 86093 . ? . description=dust chr22 . repeat_region 87823 87978 . + . description=Copia4LTR_TP chr22 ensembl protein_coding_gene 86540 87025 . - . ID=Thaps11680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF89];external_name=Thaps11680;logic_name=jgi_thaps3 chr22 ensembl transcript 86540 87025 . - . ID=Thaps11680;Parent=Thaps11680;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 86540 87025 . - 0 ID=Thaps11680;Parent=Thaps11680;rank=1 chr22 . exon 86540 87025 . - . ID=Thaps11680.1;Parent=Thaps11680;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 83310 85838 . - . ID=Thaps25685;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF88];external_name=Thaps25685;logic_name=jgi_thaps3 chr22 ensembl transcript 83310 85838 . - . ID=Thaps25685;Parent=Thaps25685;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 83310 83995 . - 0 ID=Thaps25685;Parent=Thaps25685;rank=3 chr22 . exon 83310 83995 . - . ID=Thaps25685.3;Parent=Thaps25685;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 84092 84197 . - 0 ID=Thaps25685;Parent=Thaps25685;rank=2 chr22 . exon 84092 84197 . - . ID=Thaps25685.2;Parent=Thaps25685;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 84237 85838 . - 0 ID=Thaps25685;Parent=Thaps25685;rank=1 chr22 . exon 84237 85838 . - . ID=Thaps25685.1;Parent=Thaps25685;constitutive=1;rank=1 chr22 . repeat_region 91781 91806 . ? . description=trf chr22 . repeat_region 92686 92732 . ? . description=trf chr22 . repeat_region 92700 93004 . - . description=TE1A_TP chr22 . repeat_region 93830 93887 . - . description=TE2c_TP chr22 . repeat_region 97446 97465 . ? . description=trf chr22 ensembl protein_coding_gene 90815 92234 . - . ID=Thaps11681;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF90];external_name=Thaps11681;logic_name=jgi_thaps3 chr22 ensembl transcript 90815 92234 . - . ID=Thaps11681;Parent=Thaps11681;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 90815 91291 . - 0 ID=Thaps11681;Parent=Thaps11681;rank=2 chr22 . exon 90815 91291 . - . ID=Thaps11681.2;Parent=Thaps11681;constitutive=1;rank=2 chr22 . CDS 92148 92234 . - 0 ID=Thaps11681;Parent=Thaps11681;rank=1 chr22 . exon 92148 92234 . - . ID=Thaps11681.1;Parent=Thaps11681;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 96858 103900 . + . ID=Thaps25686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF92];external_name=Thaps25686;logic_name=jgi_thaps3 chr22 ensembl transcript 96858 103900 . + . ID=Thaps25686;Parent=Thaps25686;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 96858 97951 . + 0 ID=Thaps25686;Parent=Thaps25686;rank=1 chr22 . exon 96858 97951 . + . ID=Thaps25686.1;Parent=Thaps25686;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 98062 99934 . + 0 ID=Thaps25686;Parent=Thaps25686;rank=2 chr22 . exon 98062 99934 . + . ID=Thaps25686.2;Parent=Thaps25686;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 100027 101739 . + 0 ID=Thaps25686;Parent=Thaps25686;rank=3 chr22 . CDS 101826 102134 . + 0 ID=Thaps25686;Parent=Thaps25686;rank=4 chr22 . CDS 102224 103900 . + 0 ID=Thaps25686;Parent=Thaps25686;rank=5 chr22 ensembl protein_coding_gene 94154 94658 . + . ID=Thaps264767;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF91];external_name=Thaps264767;logic_name=jgi_thaps3 chr22 ensembl transcript 94154 94658 . + . ID=Thaps264767;Parent=Thaps264767;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 94154 94282 . + 0 ID=Thaps264767;Parent=Thaps264767;rank=1 chr22 . exon 94154 94282 . + . ID=Thaps264767.1;Parent=Thaps264767;constitutive=1;rank=1 chr22 . CDS 94390 94658 . + 0 ID=Thaps264767;Parent=Thaps264767;rank=2 chr22 . exon 94390 94658 . + . ID=Thaps264767.2;Parent=Thaps264767;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . repeat_region 104478 104485 . ? . description=dust chr22 . repeat_region 104941 105118 . + . description=Harbinger4_TP chr22 . repeat_region 105041 105097 . ? . description=dust chr22 . repeat_region 105104 107632 . + . description=Harbinger4_TP chr22 . repeat_region 107525 107532 . ? . description=dust chr22 ensembl protein_coding_gene 109060 110452 . + . ID=Thaps11683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF93];external_name=Thaps11683;logic_name=jgi_thaps3 chr22 ensembl transcript 109060 110452 . + . ID=Thaps11683;Parent=Thaps11683;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 109060 109155 . + 0 ID=Thaps11683;Parent=Thaps11683;rank=1 chr22 . exon 109060 109155 . + . ID=Thaps11683.1;Parent=Thaps11683;constitutive=1;rank=1 chr22 . CDS 109208 110452 . + 0 ID=Thaps11683;Parent=Thaps11683;rank=2 chr22 . exon 109208 110452 . + . ID=Thaps11683.2;Parent=Thaps11683;constitutive=1;rank=2 chr22 . exon 100027 101739 . + . ID=Thaps25686.3;Parent=Thaps25686;constitutive=1;rank=3 chr22 . exon 101826 102134 . + . ID=Thaps25686.4;Parent=Thaps25686;constitutive=1;rank=4 chr22 . exon 102224 103900 . + . ID=Thaps25686.5;Parent=Thaps25686;constitutive=1;rank=5 chr22 . repeat_region 115729 115777 . - . description=Copia6LTR_TP chr22 . repeat_region 116894 116913 . ? . description=trf chr22 ensembl protein_coding_gene 110979 111800 . + . ID=Thaps11684;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF94];external_name=Thaps11684;logic_name=jgi_thaps3 chr22 ensembl transcript 110979 111800 . + . ID=Thaps11684;Parent=Thaps11684;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 110979 111800 . + 0 ID=Thaps11684;Parent=Thaps11684;rank=1 chr22 . exon 110979 111800 . + . ID=Thaps11684.1;Parent=Thaps11684;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 112286 115467 . - . ID=Thaps11685;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF95];external_name=Thaps11685;logic_name=jgi_thaps3 chr22 ensembl transcript 112286 115467 . - . ID=Thaps11685;Parent=Thaps11685;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 112286 112463 . - 0 ID=Thaps11685;Parent=Thaps11685;rank=9 chr22 . exon 112286 112463 . - . ID=Thaps11685.9;Parent=Thaps11685;constitutive=1;ensembl_end_phase=1;rank=9 chr22 . CDS 112559 112604 . - 0 ID=Thaps11685;Parent=Thaps11685;rank=8 chr22 . exon 112559 112604 . - . ID=Thaps11685.8;Parent=Thaps11685;constitutive=1;ensembl_end_phase=1;rank=8 chr22 . CDS 112825 112878 . - 0 ID=Thaps11685;Parent=Thaps11685;rank=7 chr22 . exon 112825 112878 . - . ID=Thaps11685.7;Parent=Thaps11685;constitutive=1;rank=7 chr22 . CDS 113101 113379 . - 0 ID=Thaps11685;Parent=Thaps11685;rank=6 chr22 . exon 113101 113379 . - . ID=Thaps11685.6;Parent=Thaps11685;constitutive=1;rank=6 chr22 . CDS 113585 113752 . - 0 ID=Thaps11685;Parent=Thaps11685;rank=5 chr22 . exon 113585 113752 . - . ID=Thaps11685.5;Parent=Thaps11685;constitutive=1;rank=5 chr22 . CDS 113833 113889 . - 0 ID=Thaps11685;Parent=Thaps11685;rank=4 chr22 . exon 113833 113889 . - . ID=Thaps11685.4;Parent=Thaps11685;constitutive=1;rank=4 chr22 . CDS 113987 114422 . - 0 ID=Thaps11685;Parent=Thaps11685;rank=3 chr22 . exon 113987 114422 . - . ID=Thaps11685.3;Parent=Thaps11685;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 114704 114937 . - 0 ID=Thaps11685;Parent=Thaps11685;rank=2 chr22 . exon 114704 114937 . - . ID=Thaps11685.2;Parent=Thaps11685;constitutive=1;rank=2 chr22 . CDS 115381 115467 . - 0 ID=Thaps11685;Parent=Thaps11685;rank=1 chr22 . exon 115381 115467 . - . ID=Thaps11685.1;Parent=Thaps11685;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 116306 123380 . + . ID=Thaps25687;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF96];external_name=Thaps25687;logic_name=jgi_thaps3 chr22 ensembl transcript 116306 123380 . + . ID=Thaps25687;Parent=Thaps25687;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 116306 117399 . + 0 ID=Thaps25687;Parent=Thaps25687;rank=1 chr22 . exon 116306 117399 . + . ID=Thaps25687.1;Parent=Thaps25687;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 117510 119382 . + 0 ID=Thaps25687;Parent=Thaps25687;rank=2 chr22 . exon 117510 119382 . + . ID=Thaps25687.2;Parent=Thaps25687;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 119475 121187 . + 0 ID=Thaps25687;Parent=Thaps25687;rank=3 chr22 . exon 119475 121187 . + . ID=Thaps25687.3;Parent=Thaps25687;constitutive=1;rank=3 chr22 . CDS 121273 121581 . + 0 ID=Thaps25687;Parent=Thaps25687;rank=4 chr22 . CDS 121671 123380 . + 0 ID=Thaps25687;Parent=Thaps25687;rank=5 chr22 ensembl protein_coding_gene 124774 126352 . + . ID=Thaps11687;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF97];external_name=Thaps11687;logic_name=jgi_thaps3 chr22 ensembl transcript 124774 126352 . + . ID=Thaps11687;Parent=Thaps11687;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 124774 124855 . + 0 ID=Thaps11687;Parent=Thaps11687;rank=1 chr22 . exon 124774 124855 . + . ID=Thaps11687.1;Parent=Thaps11687;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 125055 126352 . + 0 ID=Thaps11687;Parent=Thaps11687;rank=2 chr22 . exon 125055 126352 . + . ID=Thaps11687.2;Parent=Thaps11687;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 127988 130647 . + . ID=Thaps11688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF98];external_name=Thaps11688;logic_name=jgi_thaps3 chr22 ensembl transcript 127988 130647 . + . ID=Thaps11688;Parent=Thaps11688;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 127988 128022 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=1 chr22 . exon 127988 128022 . + . ID=Thaps11688.1;Parent=Thaps11688;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 128069 128369 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=2 chr22 . exon 128069 128369 . + . ID=Thaps11688.2;Parent=Thaps11688;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 128536 128874 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=3 chr22 . exon 128536 128874 . + . ID=Thaps11688.3;Parent=Thaps11688;constitutive=1;rank=3 chr22 . CDS 128916 128969 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=4 chr22 . exon 128916 128969 . + . ID=Thaps11688.4;Parent=Thaps11688;constitutive=1;rank=4 chr22 . CDS 129064 129120 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=5 chr22 . exon 129064 129120 . + . ID=Thaps11688.5;Parent=Thaps11688;constitutive=1;rank=5 chr22 . CDS 129202 129475 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=6 chr22 . exon 129202 129475 . + . ID=Thaps11688.6;Parent=Thaps11688;constitutive=1;ensembl_end_phase=1;rank=6 chr22 . CDS 129565 129834 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=7 chr22 . exon 129565 129834 . + . ID=Thaps11688.7;Parent=Thaps11688;constitutive=1;rank=7 chr22 . CDS 130057 130110 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=8 chr22 . CDS 130328 130376 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=9 chr22 . CDS 130473 130647 . + 0 ID=Thaps11688;Parent=Thaps11688;rank=10 chr22 . exon 121273 121581 . + . ID=Thaps25687.4;Parent=Thaps25687;constitutive=1;rank=4 chr22 . exon 121671 123380 . + . ID=Thaps25687.5;Parent=Thaps25687;constitutive=1;rank=5 chr22 . repeat_region 133835 133842 . ? . description=dust chr22 . repeat_region 134724 134782 . ? . description=dust chr22 . biological_region 135391 135391 0.999 - . logic_name=eponine chr22 . exon 130057 130110 . + . ID=Thaps11688.8;Parent=Thaps11688;constitutive=1;rank=8 chr22 . exon 130328 130376 . + . ID=Thaps11688.9;Parent=Thaps11688;constitutive=1;ensembl_end_phase=1;rank=9 chr22 . exon 130473 130647 . + . ID=Thaps11688.10;Parent=Thaps11688;constitutive=1;ensembl_end_phase=1;rank=10 chr22 ensembl protein_coding_gene 131554 135471 . - . ID=Thaps25688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CF99];external_name=Thaps25688;logic_name=jgi_thaps3 chr22 ensembl transcript 131554 135471 . - . ID=Thaps25688;Parent=Thaps25688;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 131554 135471 . - 0 ID=Thaps25688;Parent=Thaps25688;rank=1 chr22 . exon 131554 135471 . - . ID=Thaps25688.1;Parent=Thaps25688;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 135616 140678 . + . ID=Thaps25689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFA0];external_name=Thaps25689;logic_name=jgi_thaps3 chr22 ensembl transcript 135616 140678 . + . ID=Thaps25689;Parent=Thaps25689;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 135616 136923 . + 0 ID=Thaps25689;Parent=Thaps25689;rank=1 chr22 . exon 135616 136923 . + . ID=Thaps25689.1;Parent=Thaps25689;constitutive=1;rank=1 chr22 . CDS 137034 137214 . + 0 ID=Thaps25689;Parent=Thaps25689;rank=2 chr22 . exon 137034 137214 . + . ID=Thaps25689.2;Parent=Thaps25689;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 137480 139598 . + 0 ID=Thaps25689;Parent=Thaps25689;rank=3 chr22 . exon 137480 139598 . + . ID=Thaps25689.3;Parent=Thaps25689;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 139697 140678 . + 0 ID=Thaps25689;Parent=Thaps25689;rank=4 chr22 . repeat_region 141007 141042 . - . description=Harbinger4_TP chr22 ensembl protein_coding_gene 141782 142339 . + . ID=Thaps11691;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFA1];external_name=Thaps11691;logic_name=jgi_thaps3 chr22 ensembl transcript 141782 142339 . + . ID=Thaps11691;Parent=Thaps11691;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 141782 142339 . + 0 ID=Thaps11691;Parent=Thaps11691;rank=1 chr22 . exon 141782 142339 . + . ID=Thaps11691.1;Parent=Thaps11691;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 144420 145309 . - . ID=Thaps11693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFA3];external_name=Thaps11693;logic_name=jgi_thaps3 chr22 ensembl transcript 144420 145309 . - . ID=Thaps11693;Parent=Thaps11693;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 144420 144452 . - 0 ID=Thaps11693;Parent=Thaps11693;rank=3 chr22 . exon 144420 144452 . - . ID=Thaps11693.3;Parent=Thaps11693;constitutive=1;rank=3 chr22 . CDS 144475 144606 . - 0 ID=Thaps11693;Parent=Thaps11693;rank=2 chr22 . exon 144475 144606 . - . ID=Thaps11693.2;Parent=Thaps11693;constitutive=1;rank=2 chr22 . CDS 144713 145309 . - 0 ID=Thaps11693;Parent=Thaps11693;rank=1 chr22 . exon 144713 145309 . - . ID=Thaps11693.1;Parent=Thaps11693;constitutive=1;rank=1 chr22 . exon 139697 140678 . + . ID=Thaps25689.4;Parent=Thaps25689;constitutive=1;ensembl_end_phase=1;rank=4 chr22 ensembl protein_coding_gene 142974 143449 . - . ID=Thaps264768;biotype=protein_coding;description=Tim23-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFA2];external_name=Thaps264768;logic_name=jgi_thaps3 chr22 ensembl transcript 142974 143449 . - . ID=Thaps264768;Parent=Thaps264768;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 142974 143088 . - 0 ID=Thaps264768;Parent=Thaps264768;rank=2 chr22 . exon 142974 143088 . - . ID=Thaps264768.2;Parent=Thaps264768;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 143245 143449 . - 0 ID=Thaps264768;Parent=Thaps264768;rank=1 chr22 . exon 143245 143449 . - . ID=Thaps264768.1;Parent=Thaps264768;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . repeat_region 155000 155261 . ? . description=trf chr22 . repeat_region 158910 158949 . ? . description=trf chr22 ensembl protein_coding_gene 155178 155555 . + . ID=Thaps11695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFA5];external_name=Thaps11695;logic_name=jgi_thaps3 chr22 ensembl transcript 155178 155555 . + . ID=Thaps11695;Parent=Thaps11695;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 155178 155555 . + 0 ID=Thaps11695;Parent=Thaps11695;rank=1 chr22 . exon 155178 155555 . + . ID=Thaps11695.1;Parent=Thaps11695;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 157201 159602 . + . ID=Thaps11697;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFA7];external_name=Thaps11697;logic_name=jgi_thaps3 chr22 ensembl transcript 157201 159602 . + . ID=Thaps11697;Parent=Thaps11697;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 157201 157968 . + 0 ID=Thaps11697;Parent=Thaps11697;rank=1 chr22 . exon 157201 157968 . + . ID=Thaps11697.1;Parent=Thaps11697;constitutive=1;rank=1 chr22 . CDS 158207 158403 . + 0 ID=Thaps11697;Parent=Thaps11697;rank=2 chr22 . exon 158207 158403 . + . ID=Thaps11697.2;Parent=Thaps11697;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 158488 158645 . + 0 ID=Thaps11697;Parent=Thaps11697;rank=3 chr22 . exon 158488 158645 . + . ID=Thaps11697.3;Parent=Thaps11697;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 158738 159036 . + 0 ID=Thaps11697;Parent=Thaps11697;rank=4 chr22 . exon 158738 159036 . + . ID=Thaps11697.4;Parent=Thaps11697;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . CDS 159210 159602 . + 0 ID=Thaps11697;Parent=Thaps11697;rank=5 chr22 . exon 159210 159602 . + . ID=Thaps11697.5;Parent=Thaps11697;constitutive=1;rank=5 chr22 ensembl protein_coding_gene 155816 156610 . - . ID=Thaps38575;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFA6];external_name=Thaps38575;logic_name=jgi_thaps3 chr22 ensembl transcript 155816 156610 . - . ID=Thaps38575;Parent=Thaps38575;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 155816 156610 . - 0 ID=Thaps38575;Parent=Thaps38575;rank=1 chr22 . exon 155816 156610 . - . ID=Thaps38575.1;Parent=Thaps38575;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 151067 151303 . + . ID=Thaps38764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFA4];external_name=Thaps38764;logic_name=jgi_thaps3 chr22 ensembl transcript 151067 151303 . + . ID=Thaps38764;Parent=Thaps38764;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 151067 151303 . + 0 ID=Thaps38764;Parent=Thaps38764;rank=1 chr22 . exon 151067 151303 . + . ID=Thaps38764.1;Parent=Thaps38764;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 159958 160404 . - . ID=Thaps11698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFA8];external_name=Thaps11698;logic_name=jgi_thaps3 chr22 ensembl transcript 159958 160404 . - . ID=Thaps11698;Parent=Thaps11698;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 159958 160404 . - 0 ID=Thaps11698;Parent=Thaps11698;rank=1 chr22 . exon 159958 160404 . - . ID=Thaps11698.1;Parent=Thaps11698;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 167860 171080 . - . ID=Thaps11700;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFB1];external_name=Thaps11700;logic_name=jgi_thaps3 chr22 ensembl transcript 167860 171080 . - . ID=Thaps11700;Parent=Thaps11700;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 167860 168005 . - 0 ID=Thaps11700;Parent=Thaps11700;rank=6 chr22 . exon 167860 168005 . - . ID=Thaps11700.6;Parent=Thaps11700;constitutive=1;ensembl_end_phase=2;rank=6 chr22 . CDS 168189 168199 . - 0 ID=Thaps11700;Parent=Thaps11700;rank=5 chr22 . exon 168189 168199 . - . ID=Thaps11700.5;Parent=Thaps11700;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . CDS 168245 168379 . - 0 ID=Thaps11700;Parent=Thaps11700;rank=4 chr22 . exon 168245 168379 . - . ID=Thaps11700.4;Parent=Thaps11700;constitutive=1;rank=4 chr22 . CDS 168587 168885 . - 0 ID=Thaps11700;Parent=Thaps11700;rank=3 chr22 . exon 168587 168885 . - . ID=Thaps11700.3;Parent=Thaps11700;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 168969 169054 . - 0 ID=Thaps11700;Parent=Thaps11700;rank=2 chr22 . exon 168969 169054 . - . ID=Thaps11700.2;Parent=Thaps11700;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 169130 171080 . - 0 ID=Thaps11700;Parent=Thaps11700;rank=1 chr22 . exon 169130 171080 . - . ID=Thaps11700.1;Parent=Thaps11700;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 163671 164760 . - . ID=Thaps38574;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFB0];external_name=Thaps38574;logic_name=jgi_thaps3 chr22 ensembl transcript 163671 164760 . - . ID=Thaps38574;Parent=Thaps38574;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 163671 164222 . - 0 ID=Thaps38574;Parent=Thaps38574;rank=2 chr22 . exon 163671 164222 . - . ID=Thaps38574.2;Parent=Thaps38574;constitutive=1;rank=2 chr22 . CDS 164317 164760 . - 0 ID=Thaps38574;Parent=Thaps38574;rank=1 chr22 . exon 164317 164760 . - . ID=Thaps38574.1;Parent=Thaps38574;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 161139 161948 . + . ID=Thaps38724;biotype=protein_coding;description=Ascorbate peroxidase [Source:UniProtKB/TrEMBL%3BAcc:B8CFA9];external_name=Thaps38724;logic_name=jgi_thaps3 chr22 ensembl transcript 161139 161948 . + . ID=Thaps38724;Parent=Thaps38724;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 161139 161948 . + 0 ID=Thaps38724;Parent=Thaps38724;rank=1 chr22 . exon 161139 161948 . + . ID=Thaps38724.1;Parent=Thaps38724;constitutive=1;rank=1 chr22 . biological_region 172947 172950 0.999 + . logic_name=eponine chr22 . repeat_region 173138 173168 . ? . description=trf chr22 . repeat_region 173640 173658 . ? . description=dust chr22 ensembl protein_coding_gene 171817 172811 . - . ID=Thaps25692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFB2];external_name=Thaps25692;logic_name=jgi_thaps3 chr22 ensembl transcript 171817 172811 . - . ID=Thaps25692;Parent=Thaps25692;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 171817 171863 . - 0 ID=Thaps25692;Parent=Thaps25692;rank=3 chr22 . exon 171817 171863 . - . ID=Thaps25692.3;Parent=Thaps25692;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 171995 172163 . - 0 ID=Thaps25692;Parent=Thaps25692;rank=2 chr22 . exon 171995 172163 . - . ID=Thaps25692.2;Parent=Thaps25692;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 172257 172811 . - 0 ID=Thaps25692;Parent=Thaps25692;rank=1 chr22 . exon 172257 172811 . - . ID=Thaps25692.1;Parent=Thaps25692;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 173027 178113 . + . ID=Thaps25693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFB3];external_name=Thaps25693;logic_name=jgi_thaps3 chr22 ensembl transcript 173027 178113 . + . ID=Thaps25693;Parent=Thaps25693;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 173027 173108 . + 0 ID=Thaps25693;Parent=Thaps25693;rank=1 chr22 . exon 173027 173108 . + . ID=Thaps25693.1;Parent=Thaps25693;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 173137 175648 . + 0 ID=Thaps25693;Parent=Thaps25693;rank=2 chr22 . exon 173137 175648 . + . ID=Thaps25693.2;Parent=Thaps25693;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 175711 176662 . + 0 ID=Thaps25693;Parent=Thaps25693;rank=3 chr22 . exon 175711 176662 . + . ID=Thaps25693.3;Parent=Thaps25693;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 176743 178113 . + 0 ID=Thaps25693;Parent=Thaps25693;rank=4 chr22 . exon 176743 178113 . + . ID=Thaps25693.4;Parent=Thaps25693;constitutive=1;rank=4 chr22 ensembl protein_coding_gene 187712 189169 . - . ID=Thaps270065;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFB4];external_name=Thaps270065;logic_name=jgi_thaps3 chr22 ensembl transcript 187712 189169 . - . ID=Thaps270065;Parent=Thaps270065;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 187712 189169 . - 0 ID=Thaps270065;Parent=Thaps270065;rank=1 chr22 . exon 187712 189169 . - . ID=Thaps270065.1;Parent=Thaps270065;constitutive=1;rank=1 chr22 . repeat_region 195181 195200 . ? . description=dust chr22 . repeat_region 196118 196167 . ? . description=dust chr22 ensembl protein_coding_gene 195162 197314 . + . ID=Thaps11707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFB6];external_name=Thaps11707;logic_name=jgi_thaps3 chr22 ensembl transcript 195162 197314 . + . ID=Thaps11707;Parent=Thaps11707;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 195162 195897 . + 0 ID=Thaps11707;Parent=Thaps11707;rank=1 chr22 . exon 195162 195897 . + . ID=Thaps11707.1;Parent=Thaps11707;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 195996 196062 . + 0 ID=Thaps11707;Parent=Thaps11707;rank=2 chr22 . exon 195996 196062 . + . ID=Thaps11707.2;Parent=Thaps11707;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 196169 196611 . + 0 ID=Thaps11707;Parent=Thaps11707;rank=3 chr22 . exon 196169 196611 . + . ID=Thaps11707.3;Parent=Thaps11707;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 196740 197314 . + 0 ID=Thaps11707;Parent=Thaps11707;rank=4 chr22 . exon 196740 197314 . + . ID=Thaps11707.4;Parent=Thaps11707;constitutive=1;ensembl_end_phase=2;rank=4 chr22 ensembl protein_coding_gene 197569 199980 . - . ID=Thaps25695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFB7];external_name=Thaps25695;logic_name=jgi_thaps3 chr22 ensembl transcript 197569 199980 . - . ID=Thaps25695;Parent=Thaps25695;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 197569 199980 . - 0 ID=Thaps25695;Parent=Thaps25695;rank=1 chr22 . exon 197569 199980 . - . ID=Thaps25695.1;Parent=Thaps25695;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 190224 194199 . + . ID=Thaps264773;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CFB5];external_name=Thaps264773;logic_name=jgi_thaps3 chr22 ensembl transcript 190224 194199 . + . ID=Thaps264773;Parent=Thaps264773;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 190224 190284 . + 0 ID=Thaps264773;Parent=Thaps264773;rank=1 chr22 . exon 190224 190284 . + . ID=Thaps264773.1;Parent=Thaps264773;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 190394 191700 . + 0 ID=Thaps264773;Parent=Thaps264773;rank=2 chr22 . exon 190394 191700 . + . ID=Thaps264773.2;Parent=Thaps264773;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 191763 191829 . + 0 ID=Thaps264773;Parent=Thaps264773;rank=3 chr22 . exon 191763 191829 . + . ID=Thaps264773.3;Parent=Thaps264773;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 191849 192462 . + 0 ID=Thaps264773;Parent=Thaps264773;rank=4 chr22 . exon 191849 192462 . + . ID=Thaps264773.4;Parent=Thaps264773;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . CDS 192552 192937 . + 0 ID=Thaps264773;Parent=Thaps264773;rank=5 chr22 . exon 192552 192937 . + . ID=Thaps264773.5;Parent=Thaps264773;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . CDS 193046 193198 . + 0 ID=Thaps264773;Parent=Thaps264773;rank=6 chr22 . exon 193046 193198 . + . ID=Thaps264773.6;Parent=Thaps264773;constitutive=1;rank=6 chr22 . CDS 193273 194199 . + 0 ID=Thaps264773;Parent=Thaps264773;rank=7 chr22 . exon 193273 194199 . + . ID=Thaps264773.7;Parent=Thaps264773;constitutive=1;rank=7 chr22 ensembl protein_coding_gene 200675 202335 . - . ID=Thaps11709;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFB8];external_name=Thaps11709;logic_name=jgi_thaps3 chr22 ensembl transcript 200675 202335 . - . ID=Thaps11709;Parent=Thaps11709;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 200675 201795 . - 0 ID=Thaps11709;Parent=Thaps11709;rank=2 chr22 . exon 200675 201795 . - . ID=Thaps11709.2;Parent=Thaps11709;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 202014 202335 . - 0 ID=Thaps11709;Parent=Thaps11709;rank=1 chr22 . exon 202014 202335 . - . ID=Thaps11709.1;Parent=Thaps11709;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 202796 203843 . + . ID=Thaps11710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFB9];external_name=Thaps11710;logic_name=jgi_thaps3 chr22 ensembl transcript 202796 203843 . + . ID=Thaps11710;Parent=Thaps11710;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 202796 203269 . + 0 ID=Thaps11710;Parent=Thaps11710;rank=1 chr22 . exon 202796 203269 . + . ID=Thaps11710.1;Parent=Thaps11710;constitutive=1;rank=1 chr22 . CDS 203340 203843 . + 0 ID=Thaps11710;Parent=Thaps11710;rank=2 chr22 . exon 203340 203843 . + . ID=Thaps11710.2;Parent=Thaps11710;constitutive=1;rank=2 chr22 ensembl protein_coding_gene 203933 205405 . - . ID=Thaps264774;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC0];external_name=Thaps264774;logic_name=jgi_thaps3 chr22 ensembl transcript 203933 205405 . - . ID=Thaps264774;Parent=Thaps264774;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 203933 204238 . - 0 ID=Thaps264774;Parent=Thaps264774;rank=3 chr22 . exon 203933 204238 . - . ID=Thaps264774.3;Parent=Thaps264774;constitutive=1;rank=3 chr22 . CDS 204287 204483 . - 0 ID=Thaps264774;Parent=Thaps264774;rank=2 chr22 . exon 204287 204483 . - . ID=Thaps264774.2;Parent=Thaps264774;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 204587 205405 . - 0 ID=Thaps264774;Parent=Thaps264774;rank=1 chr22 . exon 204587 205405 . - . ID=Thaps264774.1;Parent=Thaps264774;constitutive=1;rank=1 chr22 . repeat_region 214278 214327 . ? . description=trf chr22 . repeat_region 214597 214688 . - . description=Copia6LTR_TP chr22 ensembl protein_coding_gene 210767 214126 . - . ID=Thaps11712;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC1];external_name=Thaps11712;logic_name=jgi_thaps3 chr22 ensembl transcript 210767 214126 . - . ID=Thaps11712;Parent=Thaps11712;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 210767 210841 . - 0 ID=Thaps11712;Parent=Thaps11712;rank=9 chr22 . exon 210767 210841 . - . ID=Thaps11712.9;Parent=Thaps11712;constitutive=1;rank=9 chr22 . CDS 211494 211547 . - 0 ID=Thaps11712;Parent=Thaps11712;rank=8 chr22 . exon 211494 211547 . - . ID=Thaps11712.8;Parent=Thaps11712;constitutive=1;rank=8 chr22 . CDS 211770 212051 . - 0 ID=Thaps11712;Parent=Thaps11712;rank=7 chr22 . exon 211770 212051 . - . ID=Thaps11712.7;Parent=Thaps11712;constitutive=1;rank=7 chr22 . CDS 212137 212417 . - 0 ID=Thaps11712;Parent=Thaps11712;rank=6 chr22 . exon 212137 212417 . - . ID=Thaps11712.6;Parent=Thaps11712;constitutive=1;ensembl_end_phase=2;rank=6 chr22 . CDS 212498 212554 . - 0 ID=Thaps11712;Parent=Thaps11712;rank=5 chr22 . exon 212498 212554 . - . ID=Thaps11712.5;Parent=Thaps11712;constitutive=1;rank=5 chr22 . CDS 212650 213085 . - 0 ID=Thaps11712;Parent=Thaps11712;rank=4 chr22 . exon 212650 213085 . - . ID=Thaps11712.4;Parent=Thaps11712;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 213184 213719 . - 0 ID=Thaps11712;Parent=Thaps11712;rank=3 chr22 . exon 213184 213719 . - . ID=Thaps11712.3;Parent=Thaps11712;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 213786 213927 . - 0 ID=Thaps11712;Parent=Thaps11712;rank=2 chr22 . exon 213786 213927 . - . ID=Thaps11712.2;Parent=Thaps11712;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 214040 214126 . - 0 ID=Thaps11712;Parent=Thaps11712;rank=1 chr22 . exon 214040 214126 . - . ID=Thaps11712.1;Parent=Thaps11712;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 215509 217438 . - . ID=Thaps11713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC2];external_name=Thaps11713;logic_name=jgi_thaps3 chr22 ensembl transcript 215509 217438 . - . ID=Thaps11713;Parent=Thaps11713;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 215509 217208 . - 0 ID=Thaps11713;Parent=Thaps11713;rank=2 chr22 . exon 215509 217208 . - . ID=Thaps11713.2;Parent=Thaps11713;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 217249 217438 . - 0 ID=Thaps11713;Parent=Thaps11713;rank=1 chr22 . exon 217249 217438 . - . ID=Thaps11713.1;Parent=Thaps11713;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 219437 222855 . - . ID=Thaps25697;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC3];external_name=Thaps25697;logic_name=jgi_thaps3 chr22 ensembl transcript 219437 222855 . - . ID=Thaps25697;Parent=Thaps25697;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 219437 219927 . - 0 ID=Thaps25697;Parent=Thaps25697;rank=6 chr22 . exon 219437 219927 . - . ID=Thaps25697.6;Parent=Thaps25697;constitutive=1;ensembl_end_phase=2;rank=6 chr22 . CDS 219998 220319 . - 0 ID=Thaps25697;Parent=Thaps25697;rank=5 chr22 . CDS 220350 222490 . - 0 ID=Thaps25697;Parent=Thaps25697;rank=4 chr22 . CDS 222552 222616 . - 0 ID=Thaps25697;Parent=Thaps25697;rank=3 chr22 . CDS 222647 222764 . - 0 ID=Thaps25697;Parent=Thaps25697;rank=2 chr22 . CDS 222804 222855 . - 0 ID=Thaps25697;Parent=Thaps25697;rank=1 chr22 ensembl protein_coding_gene 226562 228295 . - . ID=Thaps11717;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC5];external_name=Thaps11717;logic_name=jgi_thaps3 chr22 ensembl transcript 226562 228295 . - . ID=Thaps11717;Parent=Thaps11717;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 226562 228295 . - 0 ID=Thaps11717;Parent=Thaps11717;rank=1 chr22 . exon 226562 228295 . - . ID=Thaps11717.1;Parent=Thaps11717;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 228624 230795 . + . ID=Thaps11718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC6];external_name=Thaps11718;logic_name=jgi_thaps3 chr22 ensembl transcript 228624 230795 . + . ID=Thaps11718;Parent=Thaps11718;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 228624 230795 . + 0 ID=Thaps11718;Parent=Thaps11718;rank=1 chr22 . exon 228624 230795 . + . ID=Thaps11718.1;Parent=Thaps11718;constitutive=1;rank=1 chr22 . exon 219998 220319 . - . ID=Thaps25697.5;Parent=Thaps25697;constitutive=1;ensembl_end_phase=1;rank=5 chr22 . exon 220350 222490 . - . ID=Thaps25697.4;Parent=Thaps25697;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . exon 222552 222616 . - . ID=Thaps25697.3;Parent=Thaps25697;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . exon 222647 222764 . - . ID=Thaps25697.2;Parent=Thaps25697;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . exon 222804 222855 . - . ID=Thaps25697.1;Parent=Thaps25697;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 224594 226102 . + . ID=Thaps25698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC4];external_name=Thaps25698;logic_name=jgi_thaps3 chr22 ensembl transcript 224594 226102 . + . ID=Thaps25698;Parent=Thaps25698;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 224594 226102 . + 0 ID=Thaps25698;Parent=Thaps25698;rank=1 chr22 . exon 224594 226102 . + . ID=Thaps25698.1;Parent=Thaps25698;constitutive=1;rank=1 chr22 . repeat_region 238024 238125 . + . description=Gypsy3I_TP chr22 . repeat_region 238126 238769 . + . description=Gypsy3LTR_TP chr22 . repeat_region 238625 238681 . ? . description=trf chr22 . repeat_region 238770 244212 . + . description=Gypsy3I_TP chr22 ensembl protein_coding_gene 231192 231893 . - . ID=Thaps11719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC7];external_name=Thaps11719;logic_name=jgi_thaps3 chr22 ensembl transcript 231192 231893 . - . ID=Thaps11719;Parent=Thaps11719;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 231192 231893 . - 0 ID=Thaps11719;Parent=Thaps11719;rank=1 chr22 . exon 231192 231893 . - . ID=Thaps11719.1;Parent=Thaps11719;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 232236 232910 . - . ID=Thaps11720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC8];external_name=Thaps11720;logic_name=jgi_thaps3 chr22 ensembl transcript 232236 232910 . - . ID=Thaps11720;Parent=Thaps11720;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 232236 232910 . - 0 ID=Thaps11720;Parent=Thaps11720;rank=1 chr22 . exon 232236 232910 . - . ID=Thaps11720.1;Parent=Thaps11720;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 233291 234640 . + . ID=Thaps11721;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFC9];external_name=Thaps11721;logic_name=jgi_thaps3 chr22 ensembl transcript 233291 234640 . + . ID=Thaps11721;Parent=Thaps11721;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 233291 234640 . + 0 ID=Thaps11721;Parent=Thaps11721;rank=1 chr22 . exon 233291 234640 . + . ID=Thaps11721.1;Parent=Thaps11721;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 236186 236779 . + . ID=Thaps11722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFD0];external_name=Thaps11722;logic_name=jgi_thaps3 chr22 ensembl transcript 236186 236779 . + . ID=Thaps11722;Parent=Thaps11722;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 236186 236779 . + 0 ID=Thaps11722;Parent=Thaps11722;rank=1 chr22 . exon 236186 236779 . + . ID=Thaps11722.1;Parent=Thaps11722;constitutive=1;rank=1 chr22 . repeat_region 244859 244975 . + . description=TE2a_TP chr22 . repeat_region 249141 249179 . ? . description=dust chr22 ensembl gene 241587 242166 . + . ID=Thaps264775;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr22 ensembl transcript 241587 242166 . + . ID=Thaps264775;Parent=Thaps264775;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr22 . exon 241587 241783 . + . ID=Thaps264775.1;Parent=Thaps264775;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . exon 241808 242043 . + . ID=Thaps264775.2;Parent=Thaps264775;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . exon 242083 242166 . + . ID=Thaps264775.3;Parent=Thaps264775;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 245150 248403 . - . ID=Thaps264776;biotype=protein_coding;description=Member of the clp superfamily%2C regulatory beta subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CFD1];external_name=CLPB2;logic_name=jgi_thaps3 chr22 ensembl transcript 245150 248403 . - . ID=Thaps264776;Parent=Thaps264776;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 245150 245554 . - 0 ID=Thaps264776;Parent=Thaps264776;rank=7 chr22 . exon 245150 245554 . - . ID=Thaps264776.7;Parent=Thaps264776;constitutive=1;rank=7 chr22 . CDS 245634 245837 . - 0 ID=Thaps264776;Parent=Thaps264776;rank=6 chr22 . exon 245634 245837 . - . ID=Thaps264776.6;Parent=Thaps264776;constitutive=1;rank=6 chr22 . CDS 245936 246157 . - 0 ID=Thaps264776;Parent=Thaps264776;rank=5 chr22 . exon 245936 246157 . - . ID=Thaps264776.5;Parent=Thaps264776;constitutive=1;rank=5 chr22 . CDS 246256 247484 . - 0 ID=Thaps264776;Parent=Thaps264776;rank=4 chr22 . exon 246256 247484 . - . ID=Thaps264776.4;Parent=Thaps264776;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . CDS 247563 247920 . - 0 ID=Thaps264776;Parent=Thaps264776;rank=3 chr22 . exon 247563 247920 . - . ID=Thaps264776.3;Parent=Thaps264776;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 248032 248226 . - 0 ID=Thaps264776;Parent=Thaps264776;rank=2 chr22 . exon 248032 248226 . - . ID=Thaps264776.2;Parent=Thaps264776;constitutive=1;rank=2 chr22 . CDS 248266 248403 . - 0 ID=Thaps264776;Parent=Thaps264776;rank=1 chr22 . exon 248266 248403 . - . ID=Thaps264776.1;Parent=Thaps264776;constitutive=1;rank=1 chr22 . repeat_region 251426 251465 . ? . description=trf chr22 . repeat_region 254624 254913 . + . description=Copia9I_TP chr22 ensembl protein_coding_gene 249504 250412 . + . ID=Thaps11724;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFD2];external_name=Thaps11724;logic_name=jgi_thaps3 chr22 ensembl transcript 249504 250412 . + . ID=Thaps11724;Parent=Thaps11724;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 249504 250412 . + 0 ID=Thaps11724;Parent=Thaps11724;rank=1 chr22 . exon 249504 250412 . + . ID=Thaps11724.1;Parent=Thaps11724;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 250644 253159 . + . ID=Thaps11725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFD3];external_name=Thaps11725;logic_name=jgi_thaps3 chr22 ensembl transcript 250644 253159 . + . ID=Thaps11725;Parent=Thaps11725;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 250644 252337 . + 0 ID=Thaps11725;Parent=Thaps11725;rank=1 chr22 . exon 250644 252337 . + . ID=Thaps11725.1;Parent=Thaps11725;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 252358 253159 . + 0 ID=Thaps11725;Parent=Thaps11725;rank=2 chr22 . exon 252358 253159 . + . ID=Thaps11725.2;Parent=Thaps11725;constitutive=1;ensembl_end_phase=1;rank=2 chr22 ensembl protein_coding_gene 256435 260525 . - . ID=Thaps11726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFD4];external_name=Thaps11726;logic_name=jgi_thaps3 chr22 ensembl transcript 256435 260525 . - . ID=Thaps11726;Parent=Thaps11726;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 256435 256997 . - 0 ID=Thaps11726;Parent=Thaps11726;rank=3 chr22 . exon 256435 256997 . - . ID=Thaps11726.3;Parent=Thaps11726;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 257274 258421 . - 0 ID=Thaps11726;Parent=Thaps11726;rank=2 chr22 . exon 257274 258421 . - . ID=Thaps11726.2;Parent=Thaps11726;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 258799 260525 . - 0 ID=Thaps11726;Parent=Thaps11726;rank=1 chr22 . exon 258799 260525 . - . ID=Thaps11726.1;Parent=Thaps11726;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . repeat_region 262839 262846 . ? . description=dust chr22 . repeat_region 265370 265664 . + . description=Copia2LTR_TP chr22 . repeat_region 265665 270390 . + . description=Copia2I_TP chr22 ensembl protein_coding_gene 260838 262040 . - . ID=Thaps11727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFD5];external_name=Thaps11727;logic_name=jgi_thaps3 chr22 ensembl transcript 260838 262040 . - . ID=Thaps11727;Parent=Thaps11727;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 260838 262040 . - 0 ID=Thaps11727;Parent=Thaps11727;rank=1 chr22 . exon 260838 262040 . - . ID=Thaps11727.1;Parent=Thaps11727;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 262150 264756 . - . ID=Thaps11728;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFD6];external_name=Thaps11728;logic_name=jgi_thaps3 chr22 ensembl transcript 262150 264756 . - . ID=Thaps11728;Parent=Thaps11728;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 262150 264756 . - 0 ID=Thaps11728;Parent=Thaps11728;rank=1 chr22 . exon 262150 264756 . - . ID=Thaps11728.1;Parent=Thaps11728;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 266409 266689 . + . ID=Thaps264777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFD7];external_name=Thaps264777;logic_name=jgi_thaps3 chr22 ensembl transcript 266409 266689 . + . ID=Thaps264777;Parent=Thaps264777;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 266409 266689 . + 0 ID=Thaps264777;Parent=Thaps264777;rank=1 chr22 . exon 266409 266689 . + . ID=Thaps264777.1;Parent=Thaps264777;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . repeat_region 276530 276562 . ? . description=trf chr22 . repeat_region 277651 277677 . ? . description=trf chr22 ensembl protein_coding_gene 277515 278219 . + . ID=Thaps264781;biotype=protein_coding;description=Syntaxin [Source:UniProtKB/TrEMBL%3BAcc:B8CFD9];external_name=Thaps264781;logic_name=jgi_thaps3 chr22 ensembl transcript 277515 278219 . + . ID=Thaps264781;Parent=Thaps264781;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 277515 277641 . + 0 ID=Thaps264781;Parent=Thaps264781;rank=1 chr22 . exon 277515 277641 . + . ID=Thaps264781.1;Parent=Thaps264781;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 278068 278219 . + 0 ID=Thaps264781;Parent=Thaps264781;rank=2 chr22 . exon 278068 278219 . + . ID=Thaps264781.2;Parent=Thaps264781;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 278506 279021 . - . ID=Thaps264782;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE0];external_name=Thaps264782;logic_name=jgi_thaps3 chr22 ensembl transcript 278506 279021 . - . ID=Thaps264782;Parent=Thaps264782;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 278506 278777 . - 0 ID=Thaps264782;Parent=Thaps264782;rank=2 chr22 . exon 278506 278777 . - . ID=Thaps264782.2;Parent=Thaps264782;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 278922 279021 . - 0 ID=Thaps264782;Parent=Thaps264782;rank=1 chr22 . exon 278922 279021 . - . ID=Thaps264782.1;Parent=Thaps264782;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 272733 274138 . + . ID=Thaps38743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFD8];external_name=Thaps38743;logic_name=jgi_thaps3 chr22 ensembl transcript 272733 274138 . + . ID=Thaps38743;Parent=Thaps38743;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 272733 273107 . + 0 ID=Thaps38743;Parent=Thaps38743;rank=1 chr22 . exon 272733 273107 . + . ID=Thaps38743.1;Parent=Thaps38743;constitutive=1;rank=1 chr22 . CDS 273194 273265 . + 0 ID=Thaps38743;Parent=Thaps38743;rank=2 chr22 . exon 273194 273265 . + . ID=Thaps38743.2;Parent=Thaps38743;constitutive=1;rank=2 chr22 . CDS 273341 274138 . + 0 ID=Thaps38743;Parent=Thaps38743;rank=3 chr22 . exon 273341 274138 . + . ID=Thaps38743.3;Parent=Thaps38743;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 279679 280866 . - . ID=Thaps11731;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE1];external_name=Thaps11731;logic_name=jgi_thaps3 chr22 ensembl transcript 279679 280866 . - . ID=Thaps11731;Parent=Thaps11731;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 279679 280866 . - 0 ID=Thaps11731;Parent=Thaps11731;rank=1 chr22 . exon 279679 280866 . - . ID=Thaps11731.1;Parent=Thaps11731;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 285481 286229 . - . ID=Thaps11733;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE3];external_name=Thaps11733;logic_name=jgi_thaps3 chr22 ensembl transcript 285481 286229 . - . ID=Thaps11733;Parent=Thaps11733;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 285481 285528 . - 0 ID=Thaps11733;Parent=Thaps11733;rank=3 chr22 . exon 285481 285528 . - . ID=Thaps11733.3;Parent=Thaps11733;constitutive=1;rank=3 chr22 . CDS 285689 285867 . - 0 ID=Thaps11733;Parent=Thaps11733;rank=2 chr22 . exon 285689 285867 . - . ID=Thaps11733.2;Parent=Thaps11733;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 285947 286229 . - 0 ID=Thaps11733;Parent=Thaps11733;rank=1 chr22 . exon 285947 286229 . - . ID=Thaps11733.1;Parent=Thaps11733;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 286494 287944 . + . ID=Thaps11734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE4];external_name=Thaps11734;logic_name=jgi_thaps3 chr22 ensembl transcript 286494 287944 . + . ID=Thaps11734;Parent=Thaps11734;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 286494 286855 . + 0 ID=Thaps11734;Parent=Thaps11734;rank=1 chr22 . exon 286494 286855 . + . ID=Thaps11734.1;Parent=Thaps11734;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 286939 287944 . + 0 ID=Thaps11734;Parent=Thaps11734;rank=2 chr22 . exon 286939 287944 . + . ID=Thaps11734.2;Parent=Thaps11734;constitutive=1;ensembl_end_phase=1;rank=2 chr22 ensembl protein_coding_gene 281883 284491 . - . ID=Thaps25701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE2];external_name=Thaps25701;logic_name=jgi_thaps3 chr22 ensembl transcript 281883 284491 . - . ID=Thaps25701;Parent=Thaps25701;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 281883 283250 . - 0 ID=Thaps25701;Parent=Thaps25701;rank=3 chr22 . exon 281883 283250 . - . ID=Thaps25701.3;Parent=Thaps25701;constitutive=1;rank=3 chr22 . CDS 283302 283415 . - 0 ID=Thaps25701;Parent=Thaps25701;rank=2 chr22 . exon 283302 283415 . - . ID=Thaps25701.2;Parent=Thaps25701;constitutive=1;rank=2 chr22 . CDS 283769 284491 . - 0 ID=Thaps25701;Parent=Thaps25701;rank=1 chr22 . exon 283769 284491 . - . ID=Thaps25701.1;Parent=Thaps25701;constitutive=1;rank=1 chr22 . repeat_region 290345 290399 . ? . description=dust chr22 . repeat_region 297714 298770 . - . description=TE1_TP chr22 ensembl protein_coding_gene 296301 297070 . + . ID=Thaps11737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE7];external_name=Thaps11737;logic_name=jgi_thaps3 chr22 ensembl transcript 296301 297070 . + . ID=Thaps11737;Parent=Thaps11737;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 296301 296547 . + 0 ID=Thaps11737;Parent=Thaps11737;rank=1 chr22 . exon 296301 296547 . + . ID=Thaps11737.1;Parent=Thaps11737;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 296639 296665 . + 0 ID=Thaps11737;Parent=Thaps11737;rank=2 chr22 . exon 296639 296665 . + . ID=Thaps11737.2;Parent=Thaps11737;constitutive=1;rank=2 chr22 . CDS 296745 296803 . + 0 ID=Thaps11737;Parent=Thaps11737;rank=3 chr22 . exon 296745 296803 . + . ID=Thaps11737.3;Parent=Thaps11737;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 296880 296946 . + 0 ID=Thaps11737;Parent=Thaps11737;rank=4 chr22 . exon 296880 296946 . + . ID=Thaps11737.4;Parent=Thaps11737;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 297036 297070 . + 0 ID=Thaps11737;Parent=Thaps11737;rank=5 chr22 . exon 297036 297070 . + . ID=Thaps11737.5;Parent=Thaps11737;constitutive=1;ensembl_end_phase=2;rank=5 chr22 ensembl protein_coding_gene 289862 292363 . + . ID=Thaps25702;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE5];external_name=Thaps25702;logic_name=jgi_thaps3 chr22 ensembl transcript 289862 292363 . + . ID=Thaps25702;Parent=Thaps25702;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 289862 292363 . + 0 ID=Thaps25702;Parent=Thaps25702;rank=1 chr22 . exon 289862 292363 . + . ID=Thaps25702.1;Parent=Thaps25702;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 293013 295707 . + . ID=Thaps25703;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE6];external_name=Thaps25703;logic_name=jgi_thaps3 chr22 ensembl transcript 293013 295707 . + . ID=Thaps25703;Parent=Thaps25703;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 293013 295167 . + 0 ID=Thaps25703;Parent=Thaps25703;rank=1 chr22 . exon 293013 295167 . + . ID=Thaps25703.1;Parent=Thaps25703;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 295307 295707 . + 0 ID=Thaps25703;Parent=Thaps25703;rank=2 chr22 . exon 295307 295707 . + . ID=Thaps25703.2;Parent=Thaps25703;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 299405 300009 . + . ID=Thaps11738;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE8];external_name=Thaps11738;logic_name=jgi_thaps3 chr22 ensembl transcript 299405 300009 . + . ID=Thaps11738;Parent=Thaps11738;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 299405 299624 . + 0 ID=Thaps11738;Parent=Thaps11738;rank=1 chr22 . exon 299405 299624 . + . ID=Thaps11738.1;Parent=Thaps11738;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 299726 300009 . + 0 ID=Thaps11738;Parent=Thaps11738;rank=2 chr22 . exon 299726 300009 . + . ID=Thaps11738.2;Parent=Thaps11738;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 300217 301935 . - . ID=Thaps11739;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFE9];external_name=Thaps11739;logic_name=jgi_thaps3 chr22 ensembl transcript 300217 301935 . - . ID=Thaps11739;Parent=Thaps11739;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 300217 301935 . - 0 ID=Thaps11739;Parent=Thaps11739;rank=1 chr22 . exon 300217 301935 . - . ID=Thaps11739.1;Parent=Thaps11739;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 303382 306996 . + . ID=Thaps264783;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFF0];external_name=Thaps264783;logic_name=jgi_thaps3 chr22 ensembl transcript 303382 306996 . + . ID=Thaps264783;Parent=Thaps264783;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 303382 303511 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=1 chr22 . exon 303382 303511 . + . ID=Thaps264783.1;Parent=Thaps264783;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 303665 303796 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=2 chr22 . exon 303665 303796 . + . ID=Thaps264783.2;Parent=Thaps264783;constitutive=1;rank=2 chr22 . CDS 303878 304189 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=3 chr22 . exon 303878 304189 . + . ID=Thaps264783.3;Parent=Thaps264783;constitutive=1;rank=3 chr22 . CDS 304289 304482 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=4 chr22 . exon 304289 304482 . + . ID=Thaps264783.4;Parent=Thaps264783;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . CDS 304504 304649 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=5 chr22 . exon 304504 304649 . + . ID=Thaps264783.5;Parent=Thaps264783;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . CDS 304680 305298 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=6 chr22 . exon 304680 305298 . + . ID=Thaps264783.6;Parent=Thaps264783;constitutive=1;ensembl_end_phase=1;rank=6 chr22 . CDS 305329 305877 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=7 chr22 . exon 305329 305877 . + . ID=Thaps264783.7;Parent=Thaps264783;constitutive=1;rank=7 chr22 . CDS 306040 306391 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=8 chr22 . exon 306040 306391 . + . ID=Thaps264783.8;Parent=Thaps264783;constitutive=1;ensembl_end_phase=1;rank=8 chr22 . CDS 306413 306470 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=9 chr22 . exon 306413 306470 . + . ID=Thaps264783.9;Parent=Thaps264783;constitutive=1;ensembl_end_phase=1;rank=9 chr22 . CDS 306552 306621 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=10 chr22 . exon 306552 306621 . + . ID=Thaps264783.10;Parent=Thaps264783;constitutive=1;ensembl_end_phase=1;rank=10 chr22 . CDS 306637 306669 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=11 chr22 . exon 306637 306669 . + . ID=Thaps264783.11;Parent=Thaps264783;constitutive=1;rank=11 chr22 . CDS 306754 306855 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=12 chr22 . exon 306754 306855 . + . ID=Thaps264783.12;Parent=Thaps264783;constitutive=1;rank=12 chr22 . CDS 306937 306996 . + 0 ID=Thaps264783;Parent=Thaps264783;rank=13 chr22 . exon 306937 306996 . + . ID=Thaps264783.13;Parent=Thaps264783;constitutive=1;rank=13 chr22 ensembl protein_coding_gene 310634 311902 . - . ID=Thaps270069;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFF1];external_name=Thaps270069;logic_name=jgi_thaps3 chr22 ensembl transcript 310634 311902 . - . ID=Thaps270069;Parent=Thaps270069;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 310634 311034 . - 0 ID=Thaps270069;Parent=Thaps270069;rank=3 chr22 . exon 310634 311034 . - . ID=Thaps270069.3;Parent=Thaps270069;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 311245 311494 . - 0 ID=Thaps270069;Parent=Thaps270069;rank=2 chr22 . exon 311245 311494 . - . ID=Thaps270069.2;Parent=Thaps270069;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 311585 311902 . - 0 ID=Thaps270069;Parent=Thaps270069;rank=1 chr22 . exon 311585 311902 . - . ID=Thaps270069.1;Parent=Thaps270069;constitutive=1;rank=1 chr22 . repeat_region 321657 321664 . ? . description=dust chr22 ensembl protein_coding_gene 321201 333109 . + . ID=Thaps11743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFF3];external_name=Thaps11743;logic_name=jgi_thaps3 chr22 ensembl transcript 321201 333109 . + . ID=Thaps11743;Parent=Thaps11743;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 321201 321740 . + 0 ID=Thaps11743;Parent=Thaps11743;rank=1 chr22 . exon 321201 321740 . + . ID=Thaps11743.1;Parent=Thaps11743;constitutive=1;rank=1 chr22 . CDS 321815 322358 . + 0 ID=Thaps11743;Parent=Thaps11743;rank=2 chr22 . exon 321815 322358 . + . ID=Thaps11743.2;Parent=Thaps11743;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 322470 323176 . + 0 ID=Thaps11743;Parent=Thaps11743;rank=3 chr22 . exon 322470 323176 . + . ID=Thaps11743.3;Parent=Thaps11743;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 323253 323648 . + 0 ID=Thaps11743;Parent=Thaps11743;rank=4 chr22 . exon 323253 323648 . + . ID=Thaps11743.4;Parent=Thaps11743;constitutive=1;rank=4 chr22 . CDS 323734 324385 . + 0 ID=Thaps11743;Parent=Thaps11743;rank=5 chr22 . exon 323734 324385 . + . ID=Thaps11743.5;Parent=Thaps11743;constitutive=1;ensembl_end_phase=1;rank=5 chr22 . CDS 324483 331810 . + 0 ID=Thaps11743;Parent=Thaps11743;rank=6 chr22 . exon 324483 331810 . + . ID=Thaps11743.6;Parent=Thaps11743;constitutive=1;ensembl_end_phase=2;rank=6 chr22 . CDS 331880 333109 . + 0 ID=Thaps11743;Parent=Thaps11743;rank=7 chr22 ensembl protein_coding_gene 319977 320896 . + . ID=Thaps264786;biotype=protein_coding;description=RPC6%2C dna-directed RNA polymerases III 39 kDa polypeptide [Source:UniProtKB/TrEMBL%3BAcc:B8CFF2];external_name=RPC6;logic_name=jgi_thaps3 chr22 ensembl transcript 319977 320896 . + . ID=Thaps264786;Parent=Thaps264786;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 319977 320186 . + 0 ID=Thaps264786;Parent=Thaps264786;rank=1 chr22 . exon 319977 320186 . + . ID=Thaps264786.1;Parent=Thaps264786;constitutive=1;rank=1 chr22 . CDS 320295 320414 . + 0 ID=Thaps264786;Parent=Thaps264786;rank=2 chr22 . exon 320295 320414 . + . ID=Thaps264786.2;Parent=Thaps264786;constitutive=1;rank=2 chr22 . CDS 320513 320896 . + 0 ID=Thaps264786;Parent=Thaps264786;rank=3 chr22 . exon 320513 320896 . + . ID=Thaps264786.3;Parent=Thaps264786;constitutive=1;rank=3 chr22 . repeat_region 336145 336171 . ? . description=trf chr22 . exon 331880 333109 . + . ID=Thaps11743.7;Parent=Thaps11743;constitutive=1;rank=7 chr22 ensembl protein_coding_gene 333683 334898 . - . ID=Thaps11744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFF4];external_name=Thaps11744;logic_name=jgi_thaps3 chr22 ensembl transcript 333683 334898 . - . ID=Thaps11744;Parent=Thaps11744;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 333683 333770 . - 0 ID=Thaps11744;Parent=Thaps11744;rank=2 chr22 . exon 333683 333770 . - . ID=Thaps11744.2;Parent=Thaps11744;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 333811 334898 . - 0 ID=Thaps11744;Parent=Thaps11744;rank=1 chr22 . exon 333811 334898 . - . ID=Thaps11744.1;Parent=Thaps11744;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 335608 340359 . + . ID=Thaps270071;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFF5];external_name=Thaps270071;logic_name=jgi_thaps3 chr22 ensembl transcript 335608 340359 . + . ID=Thaps270071;Parent=Thaps270071;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 335608 335675 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=1 chr22 . exon 335608 335675 . + . ID=Thaps270071.1;Parent=Thaps270071;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 335771 335901 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=2 chr22 . exon 335771 335901 . + . ID=Thaps270071.2;Parent=Thaps270071;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 335941 336083 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=3 chr22 . exon 335941 336083 . + . ID=Thaps270071.3;Parent=Thaps270071;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 336159 336633 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=4 chr22 . exon 336159 336633 . + . ID=Thaps270071.4;Parent=Thaps270071;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 336670 337398 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=5 chr22 . exon 336670 337398 . + . ID=Thaps270071.5;Parent=Thaps270071;constitutive=1;rank=5 chr22 . CDS 337549 338431 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=6 chr22 . exon 337549 338431 . + . ID=Thaps270071.6;Parent=Thaps270071;constitutive=1;ensembl_end_phase=1;rank=6 chr22 . CDS 338520 338769 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=7 chr22 . exon 338520 338769 . + . ID=Thaps270071.7;Parent=Thaps270071;constitutive=1;ensembl_end_phase=1;rank=7 chr22 . CDS 338854 338931 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=8 chr22 . exon 338854 338931 . + . ID=Thaps270071.8;Parent=Thaps270071;constitutive=1;rank=8 chr22 . CDS 339016 339220 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=9 chr22 . exon 339016 339220 . + . ID=Thaps270071.9;Parent=Thaps270071;constitutive=1;ensembl_end_phase=1;rank=9 chr22 . CDS 339323 339718 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=10 chr22 . CDS 339767 340359 . + 0 ID=Thaps270071;Parent=Thaps270071;rank=11 chr22 . repeat_region 342695 342703 . ? . description=dust chr22 ensembl protein_coding_gene 342878 343558 . - . ID=Thaps11746;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFF6];external_name=Thaps11746;logic_name=jgi_thaps3 chr22 ensembl transcript 342878 343558 . - . ID=Thaps11746;Parent=Thaps11746;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 342878 343558 . - 0 ID=Thaps11746;Parent=Thaps11746;rank=1 chr22 . exon 342878 343558 . - . ID=Thaps11746.1;Parent=Thaps11746;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 345425 347185 . - . ID=Thaps11747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFF7];external_name=Thaps11747;logic_name=jgi_thaps3 chr22 ensembl transcript 345425 347185 . - . ID=Thaps11747;Parent=Thaps11747;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 345425 347185 . - 0 ID=Thaps11747;Parent=Thaps11747;rank=1 chr22 . exon 345425 347185 . - . ID=Thaps11747.1;Parent=Thaps11747;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 347918 352127 . + . ID=Thaps25707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFF8];external_name=Thaps25707;logic_name=jgi_thaps3 chr22 ensembl transcript 347918 352127 . + . ID=Thaps25707;Parent=Thaps25707;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 347918 349734 . + 0 ID=Thaps25707;Parent=Thaps25707;rank=1 chr22 . exon 347918 349734 . + . ID=Thaps25707.1;Parent=Thaps25707;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 349823 349917 . + 0 ID=Thaps25707;Parent=Thaps25707;rank=2 chr22 . CDS 349987 350306 . + 0 ID=Thaps25707;Parent=Thaps25707;rank=3 chr22 . CDS 350499 350798 . + 0 ID=Thaps25707;Parent=Thaps25707;rank=4 chr22 . CDS 350885 351749 . + 0 ID=Thaps25707;Parent=Thaps25707;rank=5 chr22 . CDS 352030 352127 . + 0 ID=Thaps25707;Parent=Thaps25707;rank=6 chr22 . exon 339323 339718 . + . ID=Thaps270071.10;Parent=Thaps270071;constitutive=1;rank=10 chr22 . exon 339767 340359 . + . ID=Thaps270071.11;Parent=Thaps270071;constitutive=1;ensembl_end_phase=2;rank=11 chr22 ensembl protein_coding_gene 352743 354346 . + . ID=Thaps11749;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFF9];external_name=Thaps11749;logic_name=jgi_thaps3 chr22 ensembl transcript 352743 354346 . + . ID=Thaps11749;Parent=Thaps11749;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 352743 353010 . + 0 ID=Thaps11749;Parent=Thaps11749;rank=1 chr22 . exon 352743 353010 . + . ID=Thaps11749.1;Parent=Thaps11749;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 353147 353352 . + 0 ID=Thaps11749;Parent=Thaps11749;rank=2 chr22 . exon 353147 353352 . + . ID=Thaps11749.2;Parent=Thaps11749;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 353726 354346 . + 0 ID=Thaps11749;Parent=Thaps11749;rank=3 chr22 . exon 353726 354346 . + . ID=Thaps11749.3;Parent=Thaps11749;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 354720 358541 . - . ID=Thaps11750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFG0];external_name=Thaps11750;logic_name=jgi_thaps3 chr22 ensembl transcript 354720 358541 . - . ID=Thaps11750;Parent=Thaps11750;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 354720 354874 . - 0 ID=Thaps11750;Parent=Thaps11750;rank=2 chr22 . exon 354720 354874 . - . ID=Thaps11750.2;Parent=Thaps11750;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 354950 358541 . - 0 ID=Thaps11750;Parent=Thaps11750;rank=1 chr22 . exon 354950 358541 . - . ID=Thaps11750.1;Parent=Thaps11750;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 358908 360836 . + . ID=Thaps11751;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFG1];external_name=Thaps11751;logic_name=jgi_thaps3 chr22 ensembl transcript 358908 360836 . + . ID=Thaps11751;Parent=Thaps11751;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 358908 360836 . + 0 ID=Thaps11751;Parent=Thaps11751;rank=1 chr22 . exon 358908 360836 . + . ID=Thaps11751.1;Parent=Thaps11751;constitutive=1;rank=1 chr22 . exon 349823 349917 . + . ID=Thaps25707.2;Parent=Thaps25707;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . exon 349987 350306 . + . ID=Thaps25707.3;Parent=Thaps25707;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . exon 350499 350798 . + . ID=Thaps25707.4;Parent=Thaps25707;constitutive=1;rank=4 chr22 . exon 350885 351749 . + . ID=Thaps25707.5;Parent=Thaps25707;constitutive=1;ensembl_end_phase=1;rank=5 chr22 . exon 352030 352127 . + . ID=Thaps25707.6;Parent=Thaps25707;constitutive=1;ensembl_end_phase=2;rank=6 chr22 . repeat_region 363009 363038 . ? . description=trf chr22 . repeat_region 363841 363887 . ? . description=dust chr22 . repeat_region 363846 363887 . ? . description=trf chr22 . repeat_region 364433 364463 . ? . description=trf chr22 . repeat_region 366949 366984 . ? . description=trf chr22 . repeat_region 367795 367804 . ? . description=dust chr22 ensembl protein_coding_gene 361632 362162 . - . ID=Thaps11752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFG2];external_name=Thaps11752;logic_name=jgi_thaps3 chr22 ensembl transcript 361632 362162 . - . ID=Thaps11752;Parent=Thaps11752;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 361632 362162 . - 0 ID=Thaps11752;Parent=Thaps11752;rank=1 chr22 . exon 361632 362162 . - . ID=Thaps11752.1;Parent=Thaps11752;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 368922 370195 . - . ID=Thaps11756;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFG6];external_name=Thaps11756;logic_name=jgi_thaps3 chr22 ensembl transcript 368922 370195 . - . ID=Thaps11756;Parent=Thaps11756;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 368922 369977 . - 0 ID=Thaps11756;Parent=Thaps11756;rank=2 chr22 . exon 368922 369977 . - . ID=Thaps11756.2;Parent=Thaps11756;constitutive=1;rank=2 chr22 . CDS 370142 370195 . - 0 ID=Thaps11756;Parent=Thaps11756;rank=1 chr22 ensembl protein_coding_gene 362986 365885 . + . ID=Thaps25708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFG3];external_name=Thaps25708;logic_name=jgi_thaps3 chr22 ensembl transcript 362986 365885 . + . ID=Thaps25708;Parent=Thaps25708;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 362986 363328 . + 0 ID=Thaps25708;Parent=Thaps25708;rank=1 chr22 . exon 362986 363328 . + . ID=Thaps25708.1;Parent=Thaps25708;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 363487 365885 . + 0 ID=Thaps25708;Parent=Thaps25708;rank=2 chr22 . exon 363487 365885 . + . ID=Thaps25708.2;Parent=Thaps25708;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 367879 368493 . + . ID=Thaps38667;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein 4 [Source:UniProtKB/TrEMBL%3BAcc:B8CFG5];external_name=LHCF4;logic_name=jgi_thaps3 chr22 ensembl transcript 367879 368493 . + . ID=Thaps38667;Parent=Thaps38667;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 367879 368493 . + 0 ID=Thaps38667;Parent=Thaps38667;rank=1 chr22 . exon 367879 368493 . + . ID=Thaps38667.1;Parent=Thaps38667;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 366381 367302 . - . ID=Thaps38715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFG4];external_name=Thaps38715;logic_name=jgi_thaps3 chr22 ensembl transcript 366381 367302 . - . ID=Thaps38715;Parent=Thaps38715;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 366381 366732 . - 0 ID=Thaps38715;Parent=Thaps38715;rank=3 chr22 . exon 366381 366732 . - . ID=Thaps38715.3;Parent=Thaps38715;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 366847 366986 . - 0 ID=Thaps38715;Parent=Thaps38715;rank=2 chr22 . exon 366847 366986 . - . ID=Thaps38715.2;Parent=Thaps38715;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 367216 367302 . - 0 ID=Thaps38715;Parent=Thaps38715;rank=1 chr22 . exon 367216 367302 . - . ID=Thaps38715.1;Parent=Thaps38715;constitutive=1;rank=1 chr22 . exon 370142 370195 . - . ID=Thaps11756.1;Parent=Thaps11756;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 370510 371310 . + . ID=Thaps11757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFG7];external_name=Thaps11757;logic_name=jgi_thaps3 chr22 ensembl transcript 370510 371310 . + . ID=Thaps11757;Parent=Thaps11757;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 370510 370957 . + 0 ID=Thaps11757;Parent=Thaps11757;rank=1 chr22 . exon 370510 370957 . + . ID=Thaps11757.1;Parent=Thaps11757;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 371138 371310 . + 0 ID=Thaps11757;Parent=Thaps11757;rank=2 chr22 . exon 371138 371310 . + . ID=Thaps11757.2;Parent=Thaps11757;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 373102 373683 . + . ID=Thaps11758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFG8];external_name=Thaps11758;logic_name=jgi_thaps3 chr22 ensembl transcript 373102 373683 . + . ID=Thaps11758;Parent=Thaps11758;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 373102 373683 . + 0 ID=Thaps11758;Parent=Thaps11758;rank=1 chr22 . exon 373102 373683 . + . ID=Thaps11758.1;Parent=Thaps11758;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 375604 376793 . - . ID=Thaps264792;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFG9];external_name=Thaps264792;logic_name=jgi_thaps3 chr22 ensembl transcript 375604 376793 . - . ID=Thaps264792;Parent=Thaps264792;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 375604 375943 . - 0 ID=Thaps264792;Parent=Thaps264792;rank=3 chr22 . exon 375604 375943 . - . ID=Thaps264792.3;Parent=Thaps264792;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 376064 376545 . - 0 ID=Thaps264792;Parent=Thaps264792;rank=2 chr22 . exon 376064 376545 . - . ID=Thaps264792.2;Parent=Thaps264792;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 376620 376793 . - 0 ID=Thaps264792;Parent=Thaps264792;rank=1 chr22 . exon 376620 376793 . - . ID=Thaps264792.1;Parent=Thaps264792;constitutive=1;rank=1 chr22 . repeat_region 379875 379908 . ? . description=trf chr22 . repeat_region 379875 379908 . ? . description=dust chr22 . repeat_region 380570 380602 . ? . description=dust chr22 . repeat_region 381039 381060 . ? . description=trf chr22 . repeat_region 381039 381060 . ? . description=dust chr22 . repeat_region 381350 381412 . ? . description=trf chr22 . repeat_region 381680 381707 . ? . description=trf chr22 . repeat_region 381680 381707 . ? . description=dust chr22 . repeat_region 381893 381942 . ? . description=trf chr22 . repeat_region 381893 381949 . ? . description=dust chr22 . repeat_region 387662 387694 . ? . description=trf chr22 . repeat_region 387662 387700 . ? . description=dust chr22 . repeat_region 388014 388021 . ? . description=dust chr22 ensembl protein_coding_gene 380460 382671 . + . ID=Thaps11760;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFH0];external_name=Thaps11760;logic_name=jgi_thaps3 chr22 ensembl transcript 380460 382671 . + . ID=Thaps11760;Parent=Thaps11760;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 380460 381030 . + 0 ID=Thaps11760;Parent=Thaps11760;rank=1 chr22 . exon 380460 381030 . + . ID=Thaps11760.1;Parent=Thaps11760;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 381207 381425 . + 0 ID=Thaps11760;Parent=Thaps11760;rank=2 chr22 . exon 381207 381425 . + . ID=Thaps11760.2;Parent=Thaps11760;constitutive=1;rank=2 chr22 . CDS 381725 381757 . + 0 ID=Thaps11760;Parent=Thaps11760;rank=3 chr22 . exon 381725 381757 . + . ID=Thaps11760.3;Parent=Thaps11760;constitutive=1;rank=3 chr22 . CDS 381882 381950 . + 0 ID=Thaps11760;Parent=Thaps11760;rank=4 chr22 . exon 381882 381950 . + . ID=Thaps11760.4;Parent=Thaps11760;constitutive=1;rank=4 chr22 . CDS 382081 382140 . + 0 ID=Thaps11760;Parent=Thaps11760;rank=5 chr22 . exon 382081 382140 . + . ID=Thaps11760.5;Parent=Thaps11760;constitutive=1;rank=5 chr22 . CDS 382261 382347 . + 0 ID=Thaps11760;Parent=Thaps11760;rank=6 chr22 . exon 382261 382347 . + . ID=Thaps11760.6;Parent=Thaps11760;constitutive=1;rank=6 chr22 . CDS 382478 382671 . + 0 ID=Thaps11760;Parent=Thaps11760;rank=7 chr22 . exon 382478 382671 . + . ID=Thaps11760.7;Parent=Thaps11760;constitutive=1;ensembl_end_phase=2;rank=7 chr22 ensembl protein_coding_gene 383295 384387 . + . ID=Thaps11761;biotype=protein_coding;description=Fructose-1%2C6-bisphosphatase aldolase [Source:UniProtKB/TrEMBL%3BAcc:B8CFH1];external_name=ALDO4;logic_name=jgi_thaps3 chr22 ensembl transcript 383295 384387 . + . ID=Thaps11761;Parent=Thaps11761;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 383295 383373 . + 0 ID=Thaps11761;Parent=Thaps11761;rank=1 chr22 . exon 383295 383373 . + . ID=Thaps11761.1;Parent=Thaps11761;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 383462 383623 . + 0 ID=Thaps11761;Parent=Thaps11761;rank=2 chr22 . exon 383462 383623 . + . ID=Thaps11761.2;Parent=Thaps11761;constitutive=1;rank=2 chr22 . CDS 383702 384387 . + 0 ID=Thaps11761;Parent=Thaps11761;rank=3 chr22 . exon 383702 384387 . + . ID=Thaps11761.3;Parent=Thaps11761;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 384517 385368 . - . ID=Thaps11762;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFH2];external_name=Thaps11762;logic_name=jgi_thaps3 chr22 ensembl transcript 384517 385368 . - . ID=Thaps11762;Parent=Thaps11762;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 384517 385368 . - 0 ID=Thaps11762;Parent=Thaps11762;rank=1 chr22 . exon 384517 385368 . - . ID=Thaps11762.1;Parent=Thaps11762;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 385698 387584 . - . ID=Thaps38578;biotype=protein_coding;description=Luminal binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFH3];external_name=BIP2;logic_name=jgi_thaps3 chr22 ensembl transcript 385698 387584 . - . ID=Thaps38578;Parent=Thaps38578;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 385698 387584 . - 0 ID=Thaps38578;Parent=Thaps38578;rank=1 chr22 . exon 385698 387584 . - . ID=Thaps38578.1;Parent=Thaps38578;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 396210 397733 . - . ID=Thaps14772;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFH6];external_name=Thaps14772;logic_name=jgi_thaps3 chr22 ensembl transcript 396210 397733 . - . ID=Thaps14772;Parent=Thaps14772;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 396210 396715 . - 0 ID=Thaps14772;Parent=Thaps14772;rank=5 chr22 . exon 396210 396715 . - . ID=Thaps14772.5;Parent=Thaps14772;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . CDS 396776 396861 . - 0 ID=Thaps14772;Parent=Thaps14772;rank=4 chr22 . exon 396776 396861 . - . ID=Thaps14772.4;Parent=Thaps14772;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . CDS 396898 397109 . - 0 ID=Thaps14772;Parent=Thaps14772;rank=3 chr22 . exon 396898 397109 . - . ID=Thaps14772.3;Parent=Thaps14772;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 397317 397397 . - 0 ID=Thaps14772;Parent=Thaps14772;rank=2 chr22 . exon 397317 397397 . - . ID=Thaps14772.2;Parent=Thaps14772;constitutive=1;rank=2 chr22 . CDS 397533 397733 . - 0 ID=Thaps14772;Parent=Thaps14772;rank=1 chr22 . exon 397533 397733 . - . ID=Thaps14772.1;Parent=Thaps14772;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 394540 395529 . + . ID=Thaps25713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFH5];external_name=Thaps25713;logic_name=jgi_thaps3 chr22 ensembl transcript 394540 395529 . + . ID=Thaps25713;Parent=Thaps25713;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 394540 395529 . + 0 ID=Thaps25713;Parent=Thaps25713;rank=1 chr22 . exon 394540 395529 . + . ID=Thaps25713.1;Parent=Thaps25713;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 392754 393928 . - . ID=Thaps30659;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFH4];external_name=Thaps30659;logic_name=jgi_thaps3 chr22 ensembl transcript 392754 393928 . - . ID=Thaps30659;Parent=Thaps30659;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 392754 393115 . - 0 ID=Thaps30659;Parent=Thaps30659;rank=3 chr22 . exon 392754 393115 . - . ID=Thaps30659.3;Parent=Thaps30659;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 393298 393383 . - 0 ID=Thaps30659;Parent=Thaps30659;rank=2 chr22 . exon 393298 393383 . - . ID=Thaps30659.2;Parent=Thaps30659;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 393495 393928 . - 0 ID=Thaps30659;Parent=Thaps30659;rank=1 chr22 . exon 393495 393928 . - . ID=Thaps30659.1;Parent=Thaps30659;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 398853 399939 . - . ID=Thaps38736;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFH7];external_name=Thaps38736;logic_name=jgi_thaps3 chr22 ensembl transcript 398853 399939 . - . ID=Thaps38736;Parent=Thaps38736;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 398853 399440 . - 0 ID=Thaps38736;Parent=Thaps38736;rank=2 chr22 . exon 398853 399440 . - . ID=Thaps38736.2;Parent=Thaps38736;constitutive=1;rank=2 chr22 . CDS 399529 399939 . - 0 ID=Thaps38736;Parent=Thaps38736;rank=1 chr22 . repeat_region 400861 401239 . ? . description=trf chr22 . repeat_region 401134 401340 . ? . description=trf chr22 . repeat_region 401354 401384 . ? . description=trf chr22 . repeat_region 401473 401480 . ? . description=dust chr22 . repeat_region 401653 401677 . ? . description=trf chr22 . repeat_region 401653 401677 . ? . description=dust chr22 . repeat_region 401767 401804 . ? . description=trf chr22 . repeat_region 401967 401980 . ? . description=dust chr22 . repeat_region 402252 402287 . ? . description=trf chr22 . repeat_region 402252 402287 . ? . description=dust chr22 . repeat_region 407809 407816 . ? . description=dust chr22 ensembl protein_coding_gene 405142 405588 . - . ID=Thaps11770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFH9];external_name=Thaps11770;logic_name=jgi_thaps3 chr22 ensembl transcript 405142 405588 . - . ID=Thaps11770;Parent=Thaps11770;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 405142 405588 . - 0 ID=Thaps11770;Parent=Thaps11770;rank=1 chr22 . exon 405142 405588 . - . ID=Thaps11770.1;Parent=Thaps11770;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 406574 407745 . - . ID=Thaps264799;biotype=protein_coding;description=Intraflagellar transport protein%2C bld1%2C osm-6 [Source:UniProtKB/TrEMBL%3BAcc:B8CFI0];external_name=Thaps264799;logic_name=jgi_thaps3 chr22 ensembl transcript 406574 407745 . - . ID=Thaps264799;Parent=Thaps264799;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 406574 407296 . - 0 ID=Thaps264799;Parent=Thaps264799;rank=2 chr22 . exon 406574 407296 . - . ID=Thaps264799.2;Parent=Thaps264799;constitutive=1;rank=2 chr22 . CDS 407324 407745 . - 0 ID=Thaps264799;Parent=Thaps264799;rank=1 chr22 . exon 407324 407745 . - . ID=Thaps264799.1;Parent=Thaps264799;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 402935 404107 . + . ID=Thaps38685;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFH8];external_name=Thaps38685;logic_name=jgi_thaps3 chr22 ensembl transcript 402935 404107 . + . ID=Thaps38685;Parent=Thaps38685;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 402935 403280 . + 0 ID=Thaps38685;Parent=Thaps38685;rank=1 chr22 . exon 402935 403280 . + . ID=Thaps38685.1;Parent=Thaps38685;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 403365 403539 . + 0 ID=Thaps38685;Parent=Thaps38685;rank=2 chr22 . exon 403365 403539 . + . ID=Thaps38685.2;Parent=Thaps38685;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 403660 404107 . + 0 ID=Thaps38685;Parent=Thaps38685;rank=3 chr22 . exon 403660 404107 . + . ID=Thaps38685.3;Parent=Thaps38685;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . exon 399529 399939 . - . ID=Thaps38736.1;Parent=Thaps38736;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 410139 411041 . - . ID=Thaps25718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFI1];external_name=Thaps25718;logic_name=jgi_thaps3 chr22 ensembl transcript 410139 411041 . - . ID=Thaps25718;Parent=Thaps25718;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 410139 411041 . - 0 ID=Thaps25718;Parent=Thaps25718;rank=1 chr22 . exon 410139 411041 . - . ID=Thaps25718.1;Parent=Thaps25718;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 412573 414051 . + . ID=Thaps25719;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFI2];external_name=Thaps25719;logic_name=jgi_thaps3 chr22 ensembl transcript 412573 414051 . + . ID=Thaps25719;Parent=Thaps25719;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 412573 414051 . + 0 ID=Thaps25719;Parent=Thaps25719;rank=1 chr22 . exon 412573 414051 . + . ID=Thaps25719.1;Parent=Thaps25719;constitutive=1;rank=1 chr22 ensembl gene 409358 409621 . + . ID=Thaps264801;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr22 ensembl transcript 409358 409621 . + . ID=Thaps264801;Parent=Thaps264801;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr22 . exon 409358 409621 . + . ID=Thaps264801.1;Parent=Thaps264801;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 415408 417259 . - . ID=Thaps264804;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFI3];external_name=Thaps264804;logic_name=jgi_thaps3 chr22 ensembl transcript 415408 417259 . - . ID=Thaps264804;Parent=Thaps264804;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 415408 415554 . - 0 ID=Thaps264804;Parent=Thaps264804;rank=7 chr22 . exon 415408 415554 . - . ID=Thaps264804.7;Parent=Thaps264804;constitutive=1;rank=7 chr22 . CDS 415632 415697 . - 0 ID=Thaps264804;Parent=Thaps264804;rank=6 chr22 . exon 415632 415697 . - . ID=Thaps264804.6;Parent=Thaps264804;constitutive=1;rank=6 chr22 . CDS 415780 415866 . - 0 ID=Thaps264804;Parent=Thaps264804;rank=5 chr22 . exon 415780 415866 . - . ID=Thaps264804.5;Parent=Thaps264804;constitutive=1;rank=5 chr22 . CDS 416157 416243 . - 0 ID=Thaps264804;Parent=Thaps264804;rank=4 chr22 . exon 416157 416243 . - . ID=Thaps264804.4;Parent=Thaps264804;constitutive=1;rank=4 chr22 . CDS 416348 416395 . - 0 ID=Thaps264804;Parent=Thaps264804;rank=3 chr22 . exon 416348 416395 . - . ID=Thaps264804.3;Parent=Thaps264804;constitutive=1;rank=3 chr22 . CDS 416675 416891 . - 0 ID=Thaps264804;Parent=Thaps264804;rank=2 chr22 . exon 416675 416891 . - . ID=Thaps264804.2;Parent=Thaps264804;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 416978 417259 . - 0 ID=Thaps264804;Parent=Thaps264804;rank=1 chr22 . exon 416978 417259 . - . ID=Thaps264804.1;Parent=Thaps264804;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 418130 418952 . - . ID=Thaps264805;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFI4];external_name=Thaps264805;logic_name=jgi_thaps3 chr22 ensembl transcript 418130 418952 . - . ID=Thaps264805;Parent=Thaps264805;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 418130 418952 . - 0 ID=Thaps264805;Parent=Thaps264805;rank=1 chr22 . exon 418130 418952 . - . ID=Thaps264805.1;Parent=Thaps264805;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . repeat_region 420334 420375 . ? . description=trf chr22 . repeat_region 421556 421607 . ? . description=dust chr22 . repeat_region 421562 421607 . ? . description=trf chr22 . repeat_region 422332 422345 . ? . description=dust chr22 . repeat_region 422599 422608 . ? . description=dust chr22 . repeat_region 423871 423902 . ? . description=trf chr22 . repeat_region 425313 425333 . ? . description=trf chr22 . repeat_region 425313 425333 . ? . description=dust chr22 . repeat_region 425377 425403 . ? . description=trf chr22 ensembl protein_coding_gene 423986 425505 . - . ID=Thaps11777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFI6];external_name=Thaps11777;logic_name=jgi_thaps3 chr22 ensembl transcript 423986 425505 . - . ID=Thaps11777;Parent=Thaps11777;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 423986 424164 . - 0 ID=Thaps11777;Parent=Thaps11777;rank=2 chr22 . exon 423986 424164 . - . ID=Thaps11777.2;Parent=Thaps11777;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 424311 425505 . - 0 ID=Thaps11777;Parent=Thaps11777;rank=1 chr22 . exon 424311 425505 . - . ID=Thaps11777.1;Parent=Thaps11777;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 420277 422303 . - . ID=Thaps25721;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFI5];external_name=Thaps25721;logic_name=jgi_thaps3 chr22 ensembl transcript 420277 422303 . - . ID=Thaps25721;Parent=Thaps25721;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 420277 420481 . - 0 ID=Thaps25721;Parent=Thaps25721;rank=4 chr22 . exon 420277 420481 . - . ID=Thaps25721.4;Parent=Thaps25721;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 420565 421094 . - 0 ID=Thaps25721;Parent=Thaps25721;rank=3 chr22 . exon 420565 421094 . - . ID=Thaps25721.3;Parent=Thaps25721;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 421187 421547 . - 0 ID=Thaps25721;Parent=Thaps25721;rank=2 chr22 . exon 421187 421547 . - . ID=Thaps25721.2;Parent=Thaps25721;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 421765 422303 . - 0 ID=Thaps25721;Parent=Thaps25721;rank=1 chr22 . exon 421765 422303 . - . ID=Thaps25721.1;Parent=Thaps25721;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 426374 432922 . + . ID=Thaps25722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFI7];external_name=Thaps25722;logic_name=jgi_thaps3 chr22 ensembl transcript 426374 432922 . + . ID=Thaps25722;Parent=Thaps25722;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 426374 428802 . + 0 ID=Thaps25722;Parent=Thaps25722;rank=1 chr22 . exon 426374 428802 . + . ID=Thaps25722.1;Parent=Thaps25722;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 428885 429101 . + 0 ID=Thaps25722;Parent=Thaps25722;rank=2 chr22 . exon 428885 429101 . + . ID=Thaps25722.2;Parent=Thaps25722;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 429227 432922 . + 0 ID=Thaps25722;Parent=Thaps25722;rank=3 chr22 ensembl protein_coding_gene 433016 435277 . - . ID=Thaps11779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFI8];external_name=Thaps11779;logic_name=jgi_thaps3 chr22 ensembl transcript 433016 435277 . - . ID=Thaps11779;Parent=Thaps11779;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 433016 435277 . - 0 ID=Thaps11779;Parent=Thaps11779;rank=1 chr22 . exon 433016 435277 . - . ID=Thaps11779.1;Parent=Thaps11779;constitutive=1;rank=1 chr22 . exon 429227 432922 . + . ID=Thaps25722.3;Parent=Thaps25722;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 437429 439142 . + . ID=Thaps25724;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ0];external_name=Thaps25724;logic_name=jgi_thaps3 chr22 ensembl transcript 437429 439142 . + . ID=Thaps25724;Parent=Thaps25724;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 437429 437844 . + 0 ID=Thaps25724;Parent=Thaps25724;rank=1 chr22 . exon 437429 437844 . + . ID=Thaps25724.1;Parent=Thaps25724;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 437888 439142 . + 0 ID=Thaps25724;Parent=Thaps25724;rank=2 chr22 . exon 437888 439142 . + . ID=Thaps25724.2;Parent=Thaps25724;constitutive=1;ensembl_end_phase=1;rank=2 chr22 ensembl protein_coding_gene 436678 437112 . - . ID=Thaps264807;biotype=protein_coding;description=V-atpase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CFI9];external_name=Thaps264807;logic_name=jgi_thaps3 chr22 ensembl transcript 436678 437112 . - . ID=Thaps264807;Parent=Thaps264807;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 436678 436798 . - 0 ID=Thaps264807;Parent=Thaps264807;rank=2 chr22 . exon 436678 436798 . - . ID=Thaps264807.2;Parent=Thaps264807;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 436844 437112 . - 0 ID=Thaps264807;Parent=Thaps264807;rank=1 chr22 . exon 436844 437112 . - . ID=Thaps264807.1;Parent=Thaps264807;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . repeat_region 444070 444104 . ? . description=dust chr22 . repeat_region 444071 444103 . ? . description=trf chr22 . repeat_region 448169 448178 . ? . description=dust chr22 ensembl protein_coding_gene 442140 443099 . + . ID=Thaps15688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ2];external_name=Thaps15688;logic_name=jgi_thaps3 chr22 ensembl transcript 442140 443099 . + . ID=Thaps15688;Parent=Thaps15688;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 442140 442453 . + 0 ID=Thaps15688;Parent=Thaps15688;rank=1 chr22 . exon 442140 442453 . + . ID=Thaps15688.1;Parent=Thaps15688;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 442493 442793 . + 0 ID=Thaps15688;Parent=Thaps15688;rank=2 chr22 . exon 442493 442793 . + . ID=Thaps15688.2;Parent=Thaps15688;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 442935 443099 . + 0 ID=Thaps15688;Parent=Thaps15688;rank=3 chr22 . exon 442935 443099 . + . ID=Thaps15688.3;Parent=Thaps15688;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 439441 439938 . + . ID=Thaps25725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ1];external_name=Thaps25725;logic_name=jgi_thaps3 chr22 ensembl transcript 439441 439938 . + . ID=Thaps25725;Parent=Thaps25725;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 439441 439938 . + 0 ID=Thaps25725;Parent=Thaps25725;rank=1 chr22 . exon 439441 439938 . + . ID=Thaps25725.1;Parent=Thaps25725;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 444112 446596 . + . ID=Thaps25726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ3];external_name=Thaps25726;logic_name=jgi_thaps3 chr22 ensembl transcript 444112 446596 . + . ID=Thaps25726;Parent=Thaps25726;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 444112 446111 . + 0 ID=Thaps25726;Parent=Thaps25726;rank=1 chr22 . exon 444112 446111 . + . ID=Thaps25726.1;Parent=Thaps25726;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 446186 446517 . + 0 ID=Thaps25726;Parent=Thaps25726;rank=2 chr22 . exon 446186 446517 . + . ID=Thaps25726.2;Parent=Thaps25726;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 446580 446596 . + 0 ID=Thaps25726;Parent=Thaps25726;rank=3 chr22 . exon 446580 446596 . + . ID=Thaps25726.3;Parent=Thaps25726;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 446999 447580 . - . ID=Thaps264808;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ4];external_name=Thaps264808;logic_name=jgi_thaps3 chr22 ensembl transcript 446999 447580 . - . ID=Thaps264808;Parent=Thaps264808;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 446999 447580 . - 0 ID=Thaps264808;Parent=Thaps264808;rank=1 chr22 . exon 446999 447580 . - . ID=Thaps264808.1;Parent=Thaps264808;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 458952 459197 . - . ID=Thaps20220;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ6];external_name=Thaps20220;logic_name=jgi_thaps3 chr22 ensembl transcript 458952 459197 . - . ID=Thaps20220;Parent=Thaps20220;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 458952 459197 . - 0 ID=Thaps20220;Parent=Thaps20220;rank=1 chr22 . exon 458952 459197 . - . ID=Thaps20220.1;Parent=Thaps20220;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 449466 451823 . - . ID=Thaps25727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ5];external_name=Thaps25727;logic_name=jgi_thaps3 chr22 ensembl transcript 449466 451823 . - . ID=Thaps25727;Parent=Thaps25727;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 449466 451823 . - 0 ID=Thaps25727;Parent=Thaps25727;rank=1 chr22 . exon 449466 451823 . - . ID=Thaps25727.1;Parent=Thaps25727;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 459939 461021 . + . ID=Thaps11788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ7];external_name=Thaps11788;logic_name=jgi_thaps3 chr22 ensembl transcript 459939 461021 . + . ID=Thaps11788;Parent=Thaps11788;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 459939 461021 . + 0 ID=Thaps11788;Parent=Thaps11788;rank=1 chr22 . exon 459939 461021 . + . ID=Thaps11788.1;Parent=Thaps11788;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 463815 464618 . + . ID=Thaps11789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ8];external_name=Thaps11789;logic_name=jgi_thaps3 chr22 ensembl transcript 463815 464618 . + . ID=Thaps11789;Parent=Thaps11789;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 463815 464618 . + 0 ID=Thaps11789;Parent=Thaps11789;rank=1 chr22 . exon 463815 464618 . + . ID=Thaps11789.1;Parent=Thaps11789;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 465131 466924 . + . ID=Thaps11790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFJ9];external_name=Thaps11790;logic_name=jgi_thaps3 chr22 ensembl transcript 465131 466924 . + . ID=Thaps11790;Parent=Thaps11790;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 465131 466924 . + 0 ID=Thaps11790;Parent=Thaps11790;rank=1 chr22 . exon 465131 466924 . + . ID=Thaps11790.1;Parent=Thaps11790;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 468554 470096 . + . ID=Thaps264809;biotype=protein_coding;description=Histone deacetylase HDAC silent information regulator protein 2 Sir2 sirtuin [Source:UniProtKB/TrEMBL%3BAcc:B8CFK0];external_name=Thaps264809;logic_name=jgi_thaps3 chr22 ensembl transcript 468554 470096 . + . ID=Thaps264809;Parent=Thaps264809;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 468554 469022 . + 0 ID=Thaps264809;Parent=Thaps264809;rank=1 chr22 . exon 468554 469022 . + . ID=Thaps264809.1;Parent=Thaps264809;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 469137 469628 . + 0 ID=Thaps264809;Parent=Thaps264809;rank=2 chr22 . CDS 469686 470096 . + 0 ID=Thaps264809;Parent=Thaps264809;rank=3 chr22 . repeat_region 470841 470848 . ? . description=dust chr22 . repeat_region 477167 477666 . ? . description=trf chr22 ensembl protein_coding_gene 472113 473397 . + . ID=Thaps11793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFK2];external_name=Thaps11793;logic_name=jgi_thaps3 chr22 ensembl transcript 472113 473397 . + . ID=Thaps11793;Parent=Thaps11793;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 472113 472385 . + 0 ID=Thaps11793;Parent=Thaps11793;rank=1 chr22 . exon 472113 472385 . + . ID=Thaps11793.1;Parent=Thaps11793;constitutive=1;rank=1 chr22 . CDS 472488 472614 . + 0 ID=Thaps11793;Parent=Thaps11793;rank=2 chr22 . exon 472488 472614 . + . ID=Thaps11793.2;Parent=Thaps11793;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 472838 473397 . + 0 ID=Thaps11793;Parent=Thaps11793;rank=3 chr22 . exon 472838 473397 . + . ID=Thaps11793.3;Parent=Thaps11793;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 474238 475938 . + . ID=Thaps11794;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFK3];external_name=Thaps11794;logic_name=jgi_thaps3 chr22 ensembl transcript 474238 475938 . + . ID=Thaps11794;Parent=Thaps11794;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 474238 474730 . + 0 ID=Thaps11794;Parent=Thaps11794;rank=1 chr22 . exon 474238 474730 . + . ID=Thaps11794.1;Parent=Thaps11794;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 474870 475041 . + 0 ID=Thaps11794;Parent=Thaps11794;rank=2 chr22 . exon 474870 475041 . + . ID=Thaps11794.2;Parent=Thaps11794;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 475164 475938 . + 0 ID=Thaps11794;Parent=Thaps11794;rank=3 chr22 . exon 475164 475938 . + . ID=Thaps11794.3;Parent=Thaps11794;constitutive=1;ensembl_end_phase=1;rank=3 chr22 ensembl protein_coding_gene 477687 480544 . + . ID=Thaps11795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFK4];external_name=Thaps11795;logic_name=jgi_thaps3 chr22 ensembl transcript 477687 480544 . + . ID=Thaps11795;Parent=Thaps11795;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 477687 477809 . + 0 ID=Thaps11795;Parent=Thaps11795;rank=1 chr22 . exon 477687 477809 . + . ID=Thaps11795.1;Parent=Thaps11795;constitutive=1;rank=1 chr22 . CDS 477941 478683 . + 0 ID=Thaps11795;Parent=Thaps11795;rank=2 chr22 . exon 477941 478683 . + . ID=Thaps11795.2;Parent=Thaps11795;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 478792 479302 . + 0 ID=Thaps11795;Parent=Thaps11795;rank=3 chr22 . exon 478792 479302 . + . ID=Thaps11795.3;Parent=Thaps11795;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 479398 479615 . + 0 ID=Thaps11795;Parent=Thaps11795;rank=4 chr22 . CDS 479707 480544 . + 0 ID=Thaps11795;Parent=Thaps11795;rank=5 chr22 ensembl protein_coding_gene 470900 471373 . - . ID=Thaps18991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFK1];external_name=Thaps18991;logic_name=jgi_thaps3 chr22 ensembl transcript 470900 471373 . - . ID=Thaps18991;Parent=Thaps18991;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 470900 471051 . - 0 ID=Thaps18991;Parent=Thaps18991;rank=2 chr22 . exon 470900 471051 . - . ID=Thaps18991.2;Parent=Thaps18991;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 471151 471373 . - 0 ID=Thaps18991;Parent=Thaps18991;rank=1 chr22 . exon 471151 471373 . - . ID=Thaps18991.1;Parent=Thaps18991;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . exon 469137 469628 . + . ID=Thaps264809.2;Parent=Thaps264809;constitutive=1;rank=2 chr22 . exon 469686 470096 . + . ID=Thaps264809.3;Parent=Thaps264809;constitutive=1;rank=3 chr22 . repeat_region 481169 481238 . - . description=TE2c_TP chr22 . exon 479398 479615 . + . ID=Thaps11795.4;Parent=Thaps11795;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . exon 479707 480544 . + . ID=Thaps11795.5;Parent=Thaps11795;constitutive=1;ensembl_end_phase=1;rank=5 chr22 ensembl protein_coding_gene 481405 482151 . + . ID=Thaps11796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFK5];external_name=Thaps11796;logic_name=jgi_thaps3 chr22 ensembl transcript 481405 482151 . + . ID=Thaps11796;Parent=Thaps11796;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 481405 482151 . + 0 ID=Thaps11796;Parent=Thaps11796;rank=1 chr22 . exon 481405 482151 . + . ID=Thaps11796.1;Parent=Thaps11796;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 482320 484175 . - . ID=Thaps11797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFK6];external_name=Thaps11797;logic_name=jgi_thaps3 chr22 ensembl transcript 482320 484175 . - . ID=Thaps11797;Parent=Thaps11797;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 482320 482414 . - 0 ID=Thaps11797;Parent=Thaps11797;rank=4 chr22 . exon 482320 482414 . - . ID=Thaps11797.4;Parent=Thaps11797;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . CDS 482436 482526 . - 0 ID=Thaps11797;Parent=Thaps11797;rank=3 chr22 . exon 482436 482526 . - . ID=Thaps11797.3;Parent=Thaps11797;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 482629 483544 . - 0 ID=Thaps11797;Parent=Thaps11797;rank=2 chr22 . exon 482629 483544 . - . ID=Thaps11797.2;Parent=Thaps11797;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 483814 484175 . - 0 ID=Thaps11797;Parent=Thaps11797;rank=1 chr22 . exon 483814 484175 . - . ID=Thaps11797.1;Parent=Thaps11797;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 487867 489187 . - . ID=Thaps11799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFK8];external_name=Thaps11799;logic_name=jgi_thaps3 chr22 ensembl transcript 487867 489187 . - . ID=Thaps11799;Parent=Thaps11799;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 487867 487903 . - 0 ID=Thaps11799;Parent=Thaps11799;rank=3 chr22 . exon 487867 487903 . - . ID=Thaps11799.3;Parent=Thaps11799;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 488101 489077 . - 0 ID=Thaps11799;Parent=Thaps11799;rank=2 chr22 . exon 488101 489077 . - . ID=Thaps11799.2;Parent=Thaps11799;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 489101 489187 . - 0 ID=Thaps11799;Parent=Thaps11799;rank=1 chr22 ensembl protein_coding_gene 484667 487763 . + . ID=Thaps25729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFK7];external_name=Thaps25729;logic_name=jgi_thaps3 chr22 ensembl transcript 484667 487763 . + . ID=Thaps25729;Parent=Thaps25729;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 484667 484933 . + 0 ID=Thaps25729;Parent=Thaps25729;rank=1 chr22 . exon 484667 484933 . + . ID=Thaps25729.1;Parent=Thaps25729;constitutive=1;rank=1 chr22 . CDS 485298 487763 . + 0 ID=Thaps25729;Parent=Thaps25729;rank=2 chr22 . exon 485298 487763 . + . ID=Thaps25729.2;Parent=Thaps25729;constitutive=1;rank=2 chr22 . repeat_region 493086 493093 . ? . description=dust chr22 . exon 489101 489187 . - . ID=Thaps11799.1;Parent=Thaps11799;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 491219 492148 . - . ID=Thaps11801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFL0];external_name=Thaps11801;logic_name=jgi_thaps3 chr22 ensembl transcript 491219 492148 . - . ID=Thaps11801;Parent=Thaps11801;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 491219 492148 . - 0 ID=Thaps11801;Parent=Thaps11801;rank=1 chr22 . exon 491219 492148 . - . ID=Thaps11801.1;Parent=Thaps11801;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 495996 496304 . + . ID=Thaps19897;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFL3];external_name=MYB7;logic_name=jgi_thaps3 chr22 ensembl transcript 495996 496304 . + . ID=Thaps19897;Parent=Thaps19897;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 495996 496304 . + 0 ID=Thaps19897;Parent=Thaps19897;rank=1 chr22 . exon 495996 496304 . + . ID=Thaps19897.1;Parent=Thaps19897;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 492401 493681 . + . ID=Thaps25730;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFL1];external_name=Thaps25730;logic_name=jgi_thaps3 chr22 ensembl transcript 492401 493681 . + . ID=Thaps25730;Parent=Thaps25730;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 492401 493402 . + 0 ID=Thaps25730;Parent=Thaps25730;rank=1 chr22 . exon 492401 493402 . + . ID=Thaps25730.1;Parent=Thaps25730;constitutive=1;rank=1 chr22 . CDS 493451 493681 . + 0 ID=Thaps25730;Parent=Thaps25730;rank=2 chr22 . exon 493451 493681 . + . ID=Thaps25730.2;Parent=Thaps25730;constitutive=1;rank=2 chr22 ensembl protein_coding_gene 490034 490786 . + . ID=Thaps264811;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFK9];external_name=Thaps264811;logic_name=jgi_thaps3 chr22 ensembl transcript 490034 490786 . + . ID=Thaps264811;Parent=Thaps264811;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 490034 490139 . + 0 ID=Thaps264811;Parent=Thaps264811;rank=1 chr22 . exon 490034 490139 . + . ID=Thaps264811.1;Parent=Thaps264811;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 490230 490786 . + 0 ID=Thaps264811;Parent=Thaps264811;rank=2 chr22 . exon 490230 490786 . + . ID=Thaps264811.2;Parent=Thaps264811;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 496887 498205 . - . ID=Thaps38662;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFL4];external_name=Thaps38662;logic_name=jgi_thaps3 chr22 ensembl transcript 496887 498205 . - . ID=Thaps38662;Parent=Thaps38662;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 496887 497590 . - 0 ID=Thaps38662;Parent=Thaps38662;rank=2 chr22 . exon 496887 497590 . - . ID=Thaps38662.2;Parent=Thaps38662;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 497719 498205 . - 0 ID=Thaps38662;Parent=Thaps38662;rank=1 chr22 . exon 497719 498205 . - . ID=Thaps38662.1;Parent=Thaps38662;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 495322 495636 . + . ID=Thaps38768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFL2];external_name=Thaps38768;logic_name=jgi_thaps3 chr22 ensembl transcript 495322 495636 . + . ID=Thaps38768;Parent=Thaps38768;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 495322 495636 . + 0 ID=Thaps38768;Parent=Thaps38768;rank=1 chr22 . exon 495322 495636 . + . ID=Thaps38768.1;Parent=Thaps38768;constitutive=1;rank=1 chr22 . repeat_region 502824 503505 . + . description=RTE1_TP chr22 . repeat_region 507622 507668 . ? . description=trf chr22 ensembl protein_coding_gene 500918 502381 . - . ID=Thaps11806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFL6];external_name=Thaps11806;logic_name=jgi_thaps3 chr22 ensembl transcript 500918 502381 . - . ID=Thaps11806;Parent=Thaps11806;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 500918 502381 . - 0 ID=Thaps11806;Parent=Thaps11806;rank=1 chr22 . exon 500918 502381 . - . ID=Thaps11806.1;Parent=Thaps11806;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 505615 506118 . - . ID=Thaps17654;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFL8];external_name=Thaps17654;logic_name=jgi_thaps3 chr22 ensembl transcript 505615 506118 . - . ID=Thaps17654;Parent=Thaps17654;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 505615 506118 . - 0 ID=Thaps17654;Parent=Thaps17654;rank=1 chr22 . exon 505615 506118 . - . ID=Thaps17654.1;Parent=Thaps17654;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 503889 505343 . + . ID=Thaps25733;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFL7];external_name=Thaps25733;logic_name=jgi_thaps3 chr22 ensembl transcript 503889 505343 . + . ID=Thaps25733;Parent=Thaps25733;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 503889 505343 . + 0 ID=Thaps25733;Parent=Thaps25733;rank=1 chr22 . exon 503889 505343 . + . ID=Thaps25733.1;Parent=Thaps25733;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 508510 510638 . - . ID=Thaps264815;biotype=protein_coding;description=Metalloprotease [Source:UniProtKB/TrEMBL%3BAcc:B8CFL9];external_name=Thaps264815;logic_name=jgi_thaps3 chr22 ensembl transcript 508510 510638 . - . ID=Thaps264815;Parent=Thaps264815;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 508510 508726 . - 0 ID=Thaps264815;Parent=Thaps264815;rank=3 chr22 . exon 508510 508726 . - . ID=Thaps264815.3;Parent=Thaps264815;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 508807 509258 . - 0 ID=Thaps264815;Parent=Thaps264815;rank=2 chr22 . exon 508807 509258 . - . ID=Thaps264815.2;Parent=Thaps264815;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 509331 510638 . - 0 ID=Thaps264815;Parent=Thaps264815;rank=1 chr22 ensembl protein_coding_gene 499385 500544 . - . ID=Thaps270087;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFL5];external_name=Thaps270087;logic_name=jgi_thaps3 chr22 ensembl transcript 499385 500544 . - . ID=Thaps270087;Parent=Thaps270087;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 499385 500082 . - 0 ID=Thaps270087;Parent=Thaps270087;rank=2 chr22 . exon 499385 500082 . - . ID=Thaps270087.2;Parent=Thaps270087;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 500259 500544 . - 0 ID=Thaps270087;Parent=Thaps270087;rank=1 chr22 . exon 500259 500544 . - . ID=Thaps270087.1;Parent=Thaps270087;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . repeat_region 514626 514665 . ? . description=dust chr22 . repeat_region 515708 515728 . ? . description=dust chr22 ensembl protein_coding_gene 511169 513505 . + . ID=Thaps25734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFM0];external_name=Thaps25734;logic_name=jgi_thaps3 chr22 ensembl transcript 511169 513505 . + . ID=Thaps25734;Parent=Thaps25734;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 511169 511851 . + 0 ID=Thaps25734;Parent=Thaps25734;rank=1 chr22 . exon 511169 511851 . + . ID=Thaps25734.1;Parent=Thaps25734;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 511932 512026 . + 0 ID=Thaps25734;Parent=Thaps25734;rank=2 chr22 . exon 511932 512026 . + . ID=Thaps25734.2;Parent=Thaps25734;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 512129 512204 . + 0 ID=Thaps25734;Parent=Thaps25734;rank=3 chr22 . exon 512129 512204 . + . ID=Thaps25734.3;Parent=Thaps25734;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 512287 513505 . + 0 ID=Thaps25734;Parent=Thaps25734;rank=4 chr22 . exon 512287 513505 . + . ID=Thaps25734.4;Parent=Thaps25734;constitutive=1;ensembl_end_phase=1;rank=4 chr22 ensembl protein_coding_gene 513890 515698 . - . ID=Thaps25735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFM1];external_name=Thaps25735;logic_name=jgi_thaps3 chr22 ensembl transcript 513890 515698 . - . ID=Thaps25735;Parent=Thaps25735;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 513890 514200 . - 0 ID=Thaps25735;Parent=Thaps25735;rank=5 chr22 . exon 513890 514200 . - . ID=Thaps25735.5;Parent=Thaps25735;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . CDS 514327 514618 . - 0 ID=Thaps25735;Parent=Thaps25735;rank=4 chr22 . exon 514327 514618 . - . ID=Thaps25735.4;Parent=Thaps25735;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 514835 514948 . - 0 ID=Thaps25735;Parent=Thaps25735;rank=3 chr22 . exon 514835 514948 . - . ID=Thaps25735.3;Parent=Thaps25735;constitutive=1;rank=3 chr22 . CDS 515103 515319 . - 0 ID=Thaps25735;Parent=Thaps25735;rank=2 chr22 . exon 515103 515319 . - . ID=Thaps25735.2;Parent=Thaps25735;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 515463 515698 . - 0 ID=Thaps25735;Parent=Thaps25735;rank=1 chr22 . exon 515463 515698 . - . ID=Thaps25735.1;Parent=Thaps25735;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 516190 517021 . + . ID=Thaps25736;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFM2];external_name=Thaps25736;logic_name=jgi_thaps3 chr22 ensembl transcript 516190 517021 . + . ID=Thaps25736;Parent=Thaps25736;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 516190 516445 . + 0 ID=Thaps25736;Parent=Thaps25736;rank=1 chr22 . exon 516190 516445 . + . ID=Thaps25736.1;Parent=Thaps25736;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 516540 517021 . + 0 ID=Thaps25736;Parent=Thaps25736;rank=2 chr22 . exon 516540 517021 . + . ID=Thaps25736.2;Parent=Thaps25736;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . exon 509331 510638 . - . ID=Thaps264815.1;Parent=Thaps264815;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 518650 518862 . - . ID=Thaps38679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFM3];external_name=Thaps38679;logic_name=jgi_thaps3 chr22 ensembl transcript 518650 518862 . - . ID=Thaps38679;Parent=Thaps38679;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 518650 518862 . - 0 ID=Thaps38679;Parent=Thaps38679;rank=1 chr22 . exon 518650 518862 . - . ID=Thaps38679.1;Parent=Thaps38679;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 520396 523280 . - . ID=Thaps25738;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFM4];external_name=Thaps25738;logic_name=jgi_thaps3 chr22 ensembl transcript 520396 523280 . - . ID=Thaps25738;Parent=Thaps25738;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 520396 520583 . - 0 ID=Thaps25738;Parent=Thaps25738;rank=7 chr22 . exon 520396 520583 . - . ID=Thaps25738.7;Parent=Thaps25738;constitutive=1;ensembl_end_phase=2;rank=7 chr22 . CDS 520888 521429 . - 0 ID=Thaps25738;Parent=Thaps25738;rank=6 chr22 . exon 520888 521429 . - . ID=Thaps25738.6;Parent=Thaps25738;constitutive=1;ensembl_end_phase=2;rank=6 chr22 . CDS 521516 521541 . - 0 ID=Thaps25738;Parent=Thaps25738;rank=5 chr22 . exon 521516 521541 . - . ID=Thaps25738.5;Parent=Thaps25738;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . CDS 521638 521795 . - 0 ID=Thaps25738;Parent=Thaps25738;rank=4 chr22 . exon 521638 521795 . - . ID=Thaps25738.4;Parent=Thaps25738;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . CDS 521881 522007 . - 0 ID=Thaps25738;Parent=Thaps25738;rank=3 chr22 . exon 521881 522007 . - . ID=Thaps25738.3;Parent=Thaps25738;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 522114 522151 . - 0 ID=Thaps25738;Parent=Thaps25738;rank=2 chr22 . exon 522114 522151 . - . ID=Thaps25738.2;Parent=Thaps25738;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 522263 523280 . - 0 ID=Thaps25738;Parent=Thaps25738;rank=1 chr22 . exon 522263 523280 . - . ID=Thaps25738.1;Parent=Thaps25738;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 527944 530471 . - . ID=Thaps25739;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFM6];external_name=Thaps25739;logic_name=jgi_thaps3 chr22 ensembl transcript 527944 530471 . - . ID=Thaps25739;Parent=Thaps25739;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 527944 528669 . - 0 ID=Thaps25739;Parent=Thaps25739;rank=2 chr22 . exon 527944 528669 . - . ID=Thaps25739.2;Parent=Thaps25739;constitutive=1;rank=2 chr22 . CDS 528741 530471 . - 0 ID=Thaps25739;Parent=Thaps25739;rank=1 chr22 . exon 528741 530471 . - . ID=Thaps25739.1;Parent=Thaps25739;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 524632 527817 . + . ID=Thaps264816;biotype=protein_coding;description=Mismatch repair protein MutS [Source:UniProtKB/TrEMBL%3BAcc:B8CFM5];external_name=Thaps264816;logic_name=jgi_thaps3 chr22 ensembl transcript 524632 527817 . + . ID=Thaps264816;Parent=Thaps264816;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 524632 524847 . + 0 ID=Thaps264816;Parent=Thaps264816;rank=1 chr22 . exon 524632 524847 . + . ID=Thaps264816.1;Parent=Thaps264816;constitutive=1;rank=1 chr22 . CDS 524896 525046 . + 0 ID=Thaps264816;Parent=Thaps264816;rank=2 chr22 . exon 524896 525046 . + . ID=Thaps264816.2;Parent=Thaps264816;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 525080 525466 . + 0 ID=Thaps264816;Parent=Thaps264816;rank=3 chr22 . exon 525080 525466 . + . ID=Thaps264816.3;Parent=Thaps264816;constitutive=1;rank=3 chr22 . CDS 525623 526042 . + 0 ID=Thaps264816;Parent=Thaps264816;rank=4 chr22 . exon 525623 526042 . + . ID=Thaps264816.4;Parent=Thaps264816;constitutive=1;rank=4 chr22 . CDS 526103 527817 . + 0 ID=Thaps264816;Parent=Thaps264816;rank=5 chr22 . exon 526103 527817 . + . ID=Thaps264816.5;Parent=Thaps264816;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . repeat_region 533785 533838 . ? . description=dust chr22 . repeat_region 534664 534691 . ? . description=trf chr22 . repeat_region 534664 534693 . ? . description=dust chr22 . repeat_region 536851 536858 . ? . description=dust chr22 ensembl protein_coding_gene 534144 535139 . + . ID=Thaps11817;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFM8];external_name=Thaps11817;logic_name=jgi_thaps3 chr22 ensembl transcript 534144 535139 . + . ID=Thaps11817;Parent=Thaps11817;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 534144 535139 . + 0 ID=Thaps11817;Parent=Thaps11817;rank=1 chr22 . exon 534144 535139 . + . ID=Thaps11817.1;Parent=Thaps11817;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 535760 536800 . + . ID=Thaps30683;biotype=protein_coding;description=Proteasome subunit alpha type 2 [Source:UniProtKB/TrEMBL%3BAcc:B8CFM9];external_name=Thaps30683;logic_name=jgi_thaps3 chr22 ensembl transcript 535760 536800 . + . ID=Thaps30683;Parent=Thaps30683;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 535760 536018 . + 0 ID=Thaps30683;Parent=Thaps30683;rank=1 chr22 . exon 535760 536018 . + . ID=Thaps30683.1;Parent=Thaps30683;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 536346 536800 . + 0 ID=Thaps30683;Parent=Thaps30683;rank=2 chr22 . exon 536346 536800 . + . ID=Thaps30683.2;Parent=Thaps30683;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 531103 531450 . + . ID=Thaps38646;biotype=protein_coding;description=Thioredoxin [Source:UniProtKB/TrEMBL%3BAcc:B8CFM7];external_name=Thaps38646;logic_name=jgi_thaps3 chr22 ensembl transcript 531103 531450 . + . ID=Thaps38646;Parent=Thaps38646;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 531103 531450 . + 0 ID=Thaps38646;Parent=Thaps38646;rank=1 chr22 . exon 531103 531450 . + . ID=Thaps38646.1;Parent=Thaps38646;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 537489 538086 . + . ID=Thaps38732;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN0];external_name=Thaps38732;logic_name=jgi_thaps3 chr22 ensembl transcript 537489 538086 . + . ID=Thaps38732;Parent=Thaps38732;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 537489 537655 . + 0 ID=Thaps38732;Parent=Thaps38732;rank=1 chr22 . exon 537489 537655 . + . ID=Thaps38732.1;Parent=Thaps38732;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 537759 538086 . + 0 ID=Thaps38732;Parent=Thaps38732;rank=2 chr22 . exon 537759 538086 . + . ID=Thaps38732.2;Parent=Thaps38732;constitutive=1;ensembl_end_phase=1;rank=2 chr22 ensembl protein_coding_gene 547758 549200 . + . ID=Thaps11823;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN4];external_name=Thaps11823;logic_name=jgi_thaps3 chr22 ensembl transcript 547758 549200 . + . ID=Thaps11823;Parent=Thaps11823;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 547758 547813 . + 0 ID=Thaps11823;Parent=Thaps11823;rank=1 chr22 . exon 547758 547813 . + . ID=Thaps11823.1;Parent=Thaps11823;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 547917 548062 . + 0 ID=Thaps11823;Parent=Thaps11823;rank=2 chr22 . exon 547917 548062 . + . ID=Thaps11823.2;Parent=Thaps11823;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 548188 548324 . + 0 ID=Thaps11823;Parent=Thaps11823;rank=3 chr22 . exon 548188 548324 . + . ID=Thaps11823.3;Parent=Thaps11823;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 548411 548514 . + 0 ID=Thaps11823;Parent=Thaps11823;rank=4 chr22 . exon 548411 548514 . + . ID=Thaps11823.4;Parent=Thaps11823;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . CDS 548598 548890 . + 0 ID=Thaps11823;Parent=Thaps11823;rank=5 chr22 . exon 548598 548890 . + . ID=Thaps11823.5;Parent=Thaps11823;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . CDS 548983 549200 . + 0 ID=Thaps11823;Parent=Thaps11823;rank=6 chr22 ensembl protein_coding_gene 544326 545751 . + . ID=Thaps25742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN2];external_name=Thaps25742;logic_name=jgi_thaps3 chr22 ensembl transcript 544326 545751 . + . ID=Thaps25742;Parent=Thaps25742;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 544326 544641 . + 0 ID=Thaps25742;Parent=Thaps25742;rank=1 chr22 . exon 544326 544641 . + . ID=Thaps25742.1;Parent=Thaps25742;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 544679 545751 . + 0 ID=Thaps25742;Parent=Thaps25742;rank=2 chr22 . exon 544679 545751 . + . ID=Thaps25742.2;Parent=Thaps25742;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl gene 541238 542751 . - . ID=Thaps264821;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr22 ensembl transcript 541238 542751 . - . ID=Thaps264821;Parent=Thaps264821;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr22 . exon 541238 541381 . - . ID=Thaps264821.7;Parent=Thaps264821;constitutive=1;rank=7 chr22 . exon 541451 541782 . - . ID=Thaps264821.6;Parent=Thaps264821;constitutive=1;ensembl_end_phase=2;rank=6 chr22 . exon 541853 541962 . - . ID=Thaps264821.5;Parent=Thaps264821;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . exon 541999 542038 . - . ID=Thaps264821.4;Parent=Thaps264821;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . exon 542128 542155 . - . ID=Thaps264821.3;Parent=Thaps264821;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . exon 542298 542425 . - . ID=Thaps264821.2;Parent=Thaps264821;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . exon 542665 542751 . - . ID=Thaps264821.1;Parent=Thaps264821;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 539317 539764 . + . ID=Thaps38647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN1];external_name=Thaps38647;logic_name=jgi_thaps3 chr22 ensembl transcript 539317 539764 . + . ID=Thaps38647;Parent=Thaps38647;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 539317 539580 . + 0 ID=Thaps38647;Parent=Thaps38647;rank=1 chr22 . exon 539317 539580 . + . ID=Thaps38647.1;Parent=Thaps38647;constitutive=1;rank=1 chr22 . CDS 539660 539764 . + 0 ID=Thaps38647;Parent=Thaps38647;rank=2 chr22 . exon 539660 539764 . + . ID=Thaps38647.2;Parent=Thaps38647;constitutive=1;rank=2 chr22 ensembl protein_coding_gene 546126 547244 . - . ID=Thaps38769;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN3];external_name=Thaps38769;logic_name=jgi_thaps3 chr22 ensembl transcript 546126 547244 . - . ID=Thaps38769;Parent=Thaps38769;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 546126 547244 . - 0 ID=Thaps38769;Parent=Thaps38769;rank=1 chr22 . exon 546126 547244 . - . ID=Thaps38769.1;Parent=Thaps38769;constitutive=1;rank=1 chr22 . repeat_region 549245 549329 . ? . description=trf chr22 . repeat_region 550831 550986 . + . description=TE1A_TP chr22 . repeat_region 558251 558284 . ? . description=dust chr22 . repeat_region 558254 558281 . ? . description=trf chr22 . exon 548983 549200 . + . ID=Thaps11823.6;Parent=Thaps11823;constitutive=1;ensembl_end_phase=2;rank=6 chr22 ensembl protein_coding_gene 549407 550615 . - . ID=Thaps11824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN5];external_name=Thaps11824;logic_name=jgi_thaps3 chr22 ensembl transcript 549407 550615 . - . ID=Thaps11824;Parent=Thaps11824;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 549407 550615 . - 0 ID=Thaps11824;Parent=Thaps11824;rank=1 chr22 . exon 549407 550615 . - . ID=Thaps11824.1;Parent=Thaps11824;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 551227 553434 . + . ID=Thaps11825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN6];external_name=Thaps11825;logic_name=jgi_thaps3 chr22 ensembl transcript 551227 553434 . + . ID=Thaps11825;Parent=Thaps11825;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 551227 553434 . + 0 ID=Thaps11825;Parent=Thaps11825;rank=1 chr22 . exon 551227 553434 . + . ID=Thaps11825.1;Parent=Thaps11825;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 553746 555404 . - . ID=Thaps11826;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN7];external_name=Thaps11826;logic_name=jgi_thaps3 chr22 ensembl transcript 553746 555404 . - . ID=Thaps11826;Parent=Thaps11826;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 553746 555404 . - 0 ID=Thaps11826;Parent=Thaps11826;rank=1 chr22 . exon 553746 555404 . - . ID=Thaps11826.1;Parent=Thaps11826;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 557557 557835 . - . ID=Thaps19069;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN9];external_name=Thaps19069;logic_name=jgi_thaps3 chr22 ensembl transcript 557557 557835 . - . ID=Thaps19069;Parent=Thaps19069;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 557557 557835 . - 0 ID=Thaps19069;Parent=Thaps19069;rank=1 chr22 . exon 557557 557835 . - . ID=Thaps19069.1;Parent=Thaps19069;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 556066 556863 . + . ID=Thaps38632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFN8];external_name=Thaps38632;logic_name=jgi_thaps3 chr22 ensembl transcript 556066 556863 . + . ID=Thaps38632;Parent=Thaps38632;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 556066 556527 . + 0 ID=Thaps38632;Parent=Thaps38632;rank=1 chr22 . exon 556066 556527 . + . ID=Thaps38632.1;Parent=Thaps38632;constitutive=1;rank=1 chr22 . CDS 556627 556863 . + 0 ID=Thaps38632;Parent=Thaps38632;rank=2 chr22 . exon 556627 556863 . + . ID=Thaps38632.2;Parent=Thaps38632;constitutive=1;rank=2 chr22 . biological_region 560191 560192 0.999 + . logic_name=eponine chr22 ensembl protein_coding_gene 564737 565726 . - . ID=Thaps11831;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFP2];external_name=Thaps11831;logic_name=jgi_thaps3 chr22 ensembl transcript 564737 565726 . - . ID=Thaps11831;Parent=Thaps11831;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 564737 565726 . - 0 ID=Thaps11831;Parent=Thaps11831;rank=1 chr22 . exon 564737 565726 . - . ID=Thaps11831.1;Parent=Thaps11831;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 566220 567835 . + . ID=Thaps11832;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFP3];external_name=Thaps11832;logic_name=jgi_thaps3 chr22 ensembl transcript 566220 567835 . + . ID=Thaps11832;Parent=Thaps11832;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 566220 566606 . + 0 ID=Thaps11832;Parent=Thaps11832;rank=1 chr22 . exon 566220 566606 . + . ID=Thaps11832.1;Parent=Thaps11832;constitutive=1;rank=1 chr22 . CDS 566744 567835 . + 0 ID=Thaps11832;Parent=Thaps11832;rank=2 chr22 . exon 566744 567835 . + . ID=Thaps11832.2;Parent=Thaps11832;constitutive=1;rank=2 chr22 ensembl protein_coding_gene 568355 568669 . - . ID=Thaps11833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFP4];external_name=Thaps11833;logic_name=jgi_thaps3 chr22 ensembl transcript 568355 568669 . - . ID=Thaps11833;Parent=Thaps11833;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 568355 568669 . - 0 ID=Thaps11833;Parent=Thaps11833;rank=1 chr22 . exon 568355 568669 . - . ID=Thaps11833.1;Parent=Thaps11833;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 559311 560354 . - . ID=Thaps264824;biotype=protein_coding;description=Translation initiation factor eif-2b alpha subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CFP0];external_name=Thaps264824;logic_name=jgi_thaps3 chr22 ensembl transcript 559311 560354 . - . ID=Thaps264824;Parent=Thaps264824;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 559311 559461 . - 0 ID=Thaps264824;Parent=Thaps264824;rank=4 chr22 . exon 559311 559461 . - . ID=Thaps264824.4;Parent=Thaps264824;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 559512 559527 . - 0 ID=Thaps264824;Parent=Thaps264824;rank=3 chr22 . exon 559512 559527 . - . ID=Thaps264824.3;Parent=Thaps264824;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 559577 560189 . - 0 ID=Thaps264824;Parent=Thaps264824;rank=2 chr22 . exon 559577 560189 . - . ID=Thaps264824.2;Parent=Thaps264824;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 560262 560354 . - 0 ID=Thaps264824;Parent=Thaps264824;rank=1 chr22 . exon 560262 560354 . - . ID=Thaps264824.1;Parent=Thaps264824;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 561263 562605 . - . ID=Thaps38559;biotype=protein_coding;description=Putative uncharacterized protein GSK-3 [Source:UniProtKB/TrEMBL%3BAcc:B8CFP1];external_name=GSK-3;logic_name=jgi_thaps3 chr22 ensembl transcript 561263 562605 . - . ID=Thaps38559;Parent=Thaps38559;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 561263 561589 . - 0 ID=Thaps38559;Parent=Thaps38559;rank=4 chr22 . exon 561263 561589 . - . ID=Thaps38559.4;Parent=Thaps38559;constitutive=1;rank=4 chr22 . CDS 561707 561789 . - 0 ID=Thaps38559;Parent=Thaps38559;rank=3 chr22 . exon 561707 561789 . - . ID=Thaps38559.3;Parent=Thaps38559;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 561872 562244 . - 0 ID=Thaps38559;Parent=Thaps38559;rank=2 chr22 . exon 561872 562244 . - . ID=Thaps38559.2;Parent=Thaps38559;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 562390 562605 . - 0 ID=Thaps38559;Parent=Thaps38559;rank=1 chr22 . exon 562390 562605 . - . ID=Thaps38559.1;Parent=Thaps38559;constitutive=1;rank=1 chr22 . repeat_region 570138 570151 . ? . description=dust chr22 . repeat_region 570249 570300 . ? . description=dust chr22 . repeat_region 570586 570604 . ? . description=dust chr22 ensembl protein_coding_gene 576100 577095 . - . ID=Thaps11836;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFP8];external_name=Thaps11836;logic_name=jgi_thaps3 chr22 ensembl transcript 576100 577095 . - . ID=Thaps11836;Parent=Thaps11836;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 576100 577095 . - 0 ID=Thaps11836;Parent=Thaps11836;rank=1 chr22 . exon 576100 577095 . - . ID=Thaps11836.1;Parent=Thaps11836;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 570610 571815 . + . ID=Thaps25744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFP6];external_name=Thaps25744;logic_name=jgi_thaps3 chr22 ensembl transcript 570610 571815 . + . ID=Thaps25744;Parent=Thaps25744;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 570610 570709 . + 0 ID=Thaps25744;Parent=Thaps25744;rank=1 chr22 . exon 570610 570709 . + . ID=Thaps25744.1;Parent=Thaps25744;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 570929 571815 . + 0 ID=Thaps25744;Parent=Thaps25744;rank=2 chr22 . exon 570929 571815 . + . ID=Thaps25744.2;Parent=Thaps25744;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 571980 574037 . - . ID=Thaps264827;biotype=protein_coding;description=Heme regulated eukaryotic translation initiation factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFP7];external_name=Thaps264827;logic_name=jgi_thaps3 chr22 ensembl transcript 571980 574037 . - . ID=Thaps264827;Parent=Thaps264827;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 571980 572658 . - 0 ID=Thaps264827;Parent=Thaps264827;rank=4 chr22 . exon 571980 572658 . - . ID=Thaps264827.4;Parent=Thaps264827;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 572733 572942 . - 0 ID=Thaps264827;Parent=Thaps264827;rank=3 chr22 . exon 572733 572942 . - . ID=Thaps264827.3;Parent=Thaps264827;constitutive=1;rank=3 chr22 . CDS 573117 573514 . - 0 ID=Thaps264827;Parent=Thaps264827;rank=2 chr22 . exon 573117 573514 . - . ID=Thaps264827.2;Parent=Thaps264827;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 573620 574037 . - 0 ID=Thaps264827;Parent=Thaps264827;rank=1 chr22 . exon 573620 574037 . - . ID=Thaps264827.1;Parent=Thaps264827;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 577470 578292 . + . ID=Thaps270092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFP9];external_name=Thaps270092;logic_name=jgi_thaps3 chr22 ensembl transcript 577470 578292 . + . ID=Thaps270092;Parent=Thaps270092;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 577470 578183 . + 0 ID=Thaps270092;Parent=Thaps270092;rank=1 chr22 . exon 577470 578183 . + . ID=Thaps270092.1;Parent=Thaps270092;constitutive=1;rank=1 chr22 . CDS 578284 578292 . + 0 ID=Thaps270092;Parent=Thaps270092;rank=2 chr22 . exon 578284 578292 . + . ID=Thaps270092.2;Parent=Thaps270092;constitutive=1;rank=2 chr22 ensembl protein_coding_gene 569316 569920 . - . ID=Thaps38651;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFP5];external_name=Thaps38651;logic_name=jgi_thaps3 chr22 ensembl transcript 569316 569920 . - . ID=Thaps38651;Parent=Thaps38651;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 569316 569590 . - 0 ID=Thaps38651;Parent=Thaps38651;rank=2 chr22 . exon 569316 569590 . - . ID=Thaps38651.2;Parent=Thaps38651;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 569689 569920 . - 0 ID=Thaps38651;Parent=Thaps38651;rank=1 chr22 . exon 569689 569920 . - . ID=Thaps38651.1;Parent=Thaps38651;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . repeat_region 581319 581349 . ? . description=trf chr22 . repeat_region 584314 584342 . ? . description=trf chr22 ensembl protein_coding_gene 581171 585736 . + . ID=Thaps11838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ0];external_name=Thaps11838;logic_name=jgi_thaps3 chr22 ensembl transcript 581171 585736 . + . ID=Thaps11838;Parent=Thaps11838;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 581171 581485 . + 0 ID=Thaps11838;Parent=Thaps11838;rank=1 chr22 . exon 581171 581485 . + . ID=Thaps11838.1;Parent=Thaps11838;constitutive=1;rank=1 chr22 . CDS 581511 581745 . + 0 ID=Thaps11838;Parent=Thaps11838;rank=2 chr22 . exon 581511 581745 . + . ID=Thaps11838.2;Parent=Thaps11838;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 581785 582158 . + 0 ID=Thaps11838;Parent=Thaps11838;rank=3 chr22 . exon 581785 582158 . + . ID=Thaps11838.3;Parent=Thaps11838;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 582260 583540 . + 0 ID=Thaps11838;Parent=Thaps11838;rank=4 chr22 . exon 582260 583540 . + . ID=Thaps11838.4;Parent=Thaps11838;constitutive=1;rank=4 chr22 . CDS 583577 585736 . + 0 ID=Thaps11838;Parent=Thaps11838;rank=5 chr22 . exon 583577 585736 . + . ID=Thaps11838.5;Parent=Thaps11838;constitutive=1;rank=5 chr22 ensembl protein_coding_gene 585851 586564 . - . ID=Thaps25746;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ1];external_name=Thaps25746;logic_name=jgi_thaps3 chr22 ensembl transcript 585851 586564 . - . ID=Thaps25746;Parent=Thaps25746;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 585851 586564 . - 0 ID=Thaps25746;Parent=Thaps25746;rank=1 chr22 . exon 585851 586564 . - . ID=Thaps25746.1;Parent=Thaps25746;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 587224 588123 . + . ID=Thaps30691;biotype=protein_coding;description=Spermine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ2];external_name=Thaps30691;logic_name=jgi_thaps3 chr22 ensembl transcript 587224 588123 . + . ID=Thaps30691;Parent=Thaps30691;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 587224 588123 . + 0 ID=Thaps30691;Parent=Thaps30691;rank=1 chr22 . exon 587224 588123 . + . ID=Thaps30691.1;Parent=Thaps30691;constitutive=1;rank=1 chr22 . repeat_region 595883 595903 . ? . description=dust chr22 ensembl protein_coding_gene 588782 589858 . - . ID=Thaps11841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ3];external_name=Thaps11841;logic_name=jgi_thaps3 chr22 ensembl transcript 588782 589858 . - . ID=Thaps11841;Parent=Thaps11841;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 588782 589858 . - 0 ID=Thaps11841;Parent=Thaps11841;rank=1 chr22 . exon 588782 589858 . - . ID=Thaps11841.1;Parent=Thaps11841;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 590407 591135 . + . ID=Thaps11842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ4];external_name=Thaps11842;logic_name=jgi_thaps3 chr22 ensembl transcript 590407 591135 . + . ID=Thaps11842;Parent=Thaps11842;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 590407 591135 . + 0 ID=Thaps11842;Parent=Thaps11842;rank=1 chr22 . exon 590407 591135 . + . ID=Thaps11842.1;Parent=Thaps11842;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 592585 594674 . - . ID=Thaps25748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ5];external_name=Thaps25748;logic_name=jgi_thaps3 chr22 ensembl transcript 592585 594674 . - . ID=Thaps25748;Parent=Thaps25748;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 592585 592641 . - 0 ID=Thaps25748;Parent=Thaps25748;rank=4 chr22 . exon 592585 592641 . - . ID=Thaps25748.4;Parent=Thaps25748;constitutive=1;rank=4 chr22 . CDS 592717 592843 . - 0 ID=Thaps25748;Parent=Thaps25748;rank=3 chr22 . exon 592717 592843 . - . ID=Thaps25748.3;Parent=Thaps25748;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 593038 593080 . - 0 ID=Thaps25748;Parent=Thaps25748;rank=2 chr22 . exon 593038 593080 . - . ID=Thaps25748.2;Parent=Thaps25748;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 593126 594674 . - 0 ID=Thaps25748;Parent=Thaps25748;rank=1 chr22 . exon 593126 594674 . - . ID=Thaps25748.1;Parent=Thaps25748;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 595003 595878 . + . ID=Thaps25749;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ6];external_name=Thaps25749;logic_name=jgi_thaps3 chr22 ensembl transcript 595003 595878 . + . ID=Thaps25749;Parent=Thaps25749;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 595003 595878 . + 0 ID=Thaps25749;Parent=Thaps25749;rank=1 chr22 . exon 595003 595878 . + . ID=Thaps25749.1;Parent=Thaps25749;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 596572 601321 . + . ID=Thaps25750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ7];external_name=Thaps25750;logic_name=jgi_thaps3 chr22 ensembl transcript 596572 601321 . + . ID=Thaps25750;Parent=Thaps25750;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 596572 597799 . + 0 ID=Thaps25750;Parent=Thaps25750;rank=1 chr22 . exon 596572 597799 . + . ID=Thaps25750.1;Parent=Thaps25750;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 597958 598110 . + 0 ID=Thaps25750;Parent=Thaps25750;rank=2 chr22 . exon 597958 598110 . + . ID=Thaps25750.2;Parent=Thaps25750;constitutive=1;rank=2 chr22 . CDS 598165 598482 . + 0 ID=Thaps25750;Parent=Thaps25750;rank=3 chr22 . exon 598165 598482 . + . ID=Thaps25750.3;Parent=Thaps25750;constitutive=1;rank=3 chr22 . CDS 598573 598902 . + 0 ID=Thaps25750;Parent=Thaps25750;rank=4 chr22 . exon 598573 598902 . + . ID=Thaps25750.4;Parent=Thaps25750;constitutive=1;rank=4 chr22 . CDS 599118 601321 . + 0 ID=Thaps25750;Parent=Thaps25750;rank=5 chr22 . repeat_region 602275 602304 . ? . description=trf chr22 ensembl protein_coding_gene 601470 602855 . - . ID=Thaps11846;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ8];external_name=Thaps11846;logic_name=jgi_thaps3 chr22 ensembl transcript 601470 602855 . - . ID=Thaps11846;Parent=Thaps11846;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 601470 602855 . - 0 ID=Thaps11846;Parent=Thaps11846;rank=1 chr22 . exon 601470 602855 . - . ID=Thaps11846.1;Parent=Thaps11846;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 606911 607566 . - . ID=Thaps11848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFQ9];external_name=Thaps11848;logic_name=jgi_thaps3 chr22 ensembl transcript 606911 607566 . - . ID=Thaps11848;Parent=Thaps11848;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 606911 607189 . - 0 ID=Thaps11848;Parent=Thaps11848;rank=3 chr22 . exon 606911 607189 . - . ID=Thaps11848.3;Parent=Thaps11848;constitutive=1;rank=3 chr22 . CDS 607268 607406 . - 0 ID=Thaps11848;Parent=Thaps11848;rank=2 chr22 . exon 607268 607406 . - . ID=Thaps11848.2;Parent=Thaps11848;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 607469 607566 . - 0 ID=Thaps11848;Parent=Thaps11848;rank=1 chr22 . exon 607469 607566 . - . ID=Thaps11848.1;Parent=Thaps11848;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . exon 599118 601321 . + . ID=Thaps25750.5;Parent=Thaps25750;constitutive=1;ensembl_end_phase=2;rank=5 chr22 ensembl gene 603093 605898 . - . ID=Thaps264833;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr22 ensembl transcript 603093 605898 . - . ID=Thaps264833;Parent=Thaps264833;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr22 . exon 603093 603322 . - . ID=Thaps264833.12;Parent=Thaps264833;constitutive=1;ensembl_end_phase=2;rank=12 chr22 . exon 603341 603466 . - . ID=Thaps264833.11;Parent=Thaps264833;constitutive=1;rank=11 chr22 . exon 603494 603796 . - . ID=Thaps264833.10;Parent=Thaps264833;constitutive=1;rank=10 chr22 . exon 603900 604112 . - . ID=Thaps264833.9;Parent=Thaps264833;constitutive=1;rank=9 chr22 . exon 604215 604356 . - . ID=Thaps264833.8;Parent=Thaps264833;constitutive=1;ensembl_end_phase=1;rank=8 chr22 . exon 604423 604727 . - . ID=Thaps264833.7;Parent=Thaps264833;constitutive=1;ensembl_end_phase=2;rank=7 chr22 . exon 604755 604808 . - . ID=Thaps264833.6;Parent=Thaps264833;constitutive=1;rank=6 chr22 . exon 604846 604898 . - . ID=Thaps264833.5;Parent=Thaps264833;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . exon 604928 605213 . - . ID=Thaps264833.4;Parent=Thaps264833;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . exon 605271 605494 . - . ID=Thaps264833.3;Parent=Thaps264833;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . exon 605546 605617 . - . ID=Thaps264833.2;Parent=Thaps264833;constitutive=1;rank=2 chr22 . exon 605741 605898 . - . ID=Thaps264833.1;Parent=Thaps264833;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . repeat_region 608711 608746 . + . description=Copia9LTR_TP chr22 ensembl protein_coding_gene 614321 615045 . - . ID=Thaps11851;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR3];external_name=Thaps11851;logic_name=jgi_thaps3 chr22 ensembl transcript 614321 615045 . - . ID=Thaps11851;Parent=Thaps11851;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 614321 614494 . - 0 ID=Thaps11851;Parent=Thaps11851;rank=2 chr22 . exon 614321 614494 . - . ID=Thaps11851.2;Parent=Thaps11851;constitutive=1;rank=2 chr22 . CDS 614611 615045 . - 0 ID=Thaps11851;Parent=Thaps11851;rank=1 chr22 . exon 614611 615045 . - . ID=Thaps11851.1;Parent=Thaps11851;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 612116 614220 . + . ID=Thaps25753;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR2];external_name=Thaps25753;logic_name=jgi_thaps3 chr22 ensembl transcript 612116 614220 . + . ID=Thaps25753;Parent=Thaps25753;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 612116 612785 . + 0 ID=Thaps25753;Parent=Thaps25753;rank=1 chr22 . exon 612116 612785 . + . ID=Thaps25753.1;Parent=Thaps25753;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 612884 613065 . + 0 ID=Thaps25753;Parent=Thaps25753;rank=2 chr22 . exon 612884 613065 . + . ID=Thaps25753.2;Parent=Thaps25753;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 613150 614220 . + 0 ID=Thaps25753;Parent=Thaps25753;rank=3 chr22 . exon 613150 614220 . + . ID=Thaps25753.3;Parent=Thaps25753;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 615422 617716 . + . ID=Thaps25754;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR4];external_name=Thaps25754;logic_name=jgi_thaps3 chr22 ensembl transcript 615422 617716 . + . ID=Thaps25754;Parent=Thaps25754;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 615422 617716 . + 0 ID=Thaps25754;Parent=Thaps25754;rank=1 chr22 . exon 615422 617716 . + . ID=Thaps25754.1;Parent=Thaps25754;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 609158 610154 . + . ID=Thaps264834;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR0];external_name=Thaps264834;logic_name=jgi_thaps3 chr22 ensembl transcript 609158 610154 . + . ID=Thaps264834;Parent=Thaps264834;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 609158 609268 . + 0 ID=Thaps264834;Parent=Thaps264834;rank=1 chr22 . exon 609158 609268 . + . ID=Thaps264834.1;Parent=Thaps264834;constitutive=1;rank=1 chr22 . CDS 609362 609734 . + 0 ID=Thaps264834;Parent=Thaps264834;rank=2 chr22 . exon 609362 609734 . + . ID=Thaps264834.2;Parent=Thaps264834;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 609823 610154 . + 0 ID=Thaps264834;Parent=Thaps264834;rank=3 chr22 . exon 609823 610154 . + . ID=Thaps264834.3;Parent=Thaps264834;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 610564 611781 . + . ID=Thaps38723;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR1];external_name=Thaps38723;logic_name=jgi_thaps3 chr22 ensembl transcript 610564 611781 . + . ID=Thaps38723;Parent=Thaps38723;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 610564 611175 . + 0 ID=Thaps38723;Parent=Thaps38723;rank=1 chr22 . exon 610564 611175 . + . ID=Thaps38723.1;Parent=Thaps38723;constitutive=1;rank=1 chr22 . CDS 611326 611781 . + 0 ID=Thaps38723;Parent=Thaps38723;rank=2 chr22 . exon 611326 611781 . + . ID=Thaps38723.2;Parent=Thaps38723;constitutive=1;rank=2 chr22 . repeat_region 625037 625073 . ? . description=trf chr22 . repeat_region 626090 626152 . ? . description=dust chr22 ensembl protein_coding_gene 618665 622796 . + . ID=Thaps11853;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR5];external_name=Thaps11853;logic_name=jgi_thaps3 chr22 ensembl transcript 618665 622796 . + . ID=Thaps11853;Parent=Thaps11853;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 618665 618814 . + 0 ID=Thaps11853;Parent=Thaps11853;rank=1 chr22 . exon 618665 618814 . + . ID=Thaps11853.1;Parent=Thaps11853;constitutive=1;rank=1 chr22 . CDS 618944 619728 . + 0 ID=Thaps11853;Parent=Thaps11853;rank=2 chr22 . exon 618944 619728 . + . ID=Thaps11853.2;Parent=Thaps11853;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 619810 620224 . + 0 ID=Thaps11853;Parent=Thaps11853;rank=3 chr22 . exon 619810 620224 . + . ID=Thaps11853.3;Parent=Thaps11853;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 620265 620331 . + 0 ID=Thaps11853;Parent=Thaps11853;rank=4 chr22 . exon 620265 620331 . + . ID=Thaps11853.4;Parent=Thaps11853;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 620471 620617 . + 0 ID=Thaps11853;Parent=Thaps11853;rank=5 chr22 . exon 620471 620617 . + . ID=Thaps11853.5;Parent=Thaps11853;constitutive=1;rank=5 chr22 . CDS 620768 621200 . + 0 ID=Thaps11853;Parent=Thaps11853;rank=6 chr22 . exon 620768 621200 . + . ID=Thaps11853.6;Parent=Thaps11853;constitutive=1;ensembl_end_phase=1;rank=6 chr22 . CDS 621350 621537 . + 0 ID=Thaps11853;Parent=Thaps11853;rank=7 chr22 . exon 621350 621537 . + . ID=Thaps11853.7;Parent=Thaps11853;constitutive=1;ensembl_end_phase=2;rank=7 chr22 . CDS 621613 622796 . + 0 ID=Thaps11853;Parent=Thaps11853;rank=8 chr22 . exon 621613 622796 . + . ID=Thaps11853.8;Parent=Thaps11853;constitutive=1;ensembl_end_phase=2;rank=8 chr22 ensembl protein_coding_gene 623406 623768 . - . ID=Thaps11854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR6];external_name=Thaps11854;logic_name=jgi_thaps3 chr22 ensembl transcript 623406 623768 . - . ID=Thaps11854;Parent=Thaps11854;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 623406 623768 . - 0 ID=Thaps11854;Parent=Thaps11854;rank=1 chr22 . exon 623406 623768 . - . ID=Thaps11854.1;Parent=Thaps11854;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 624350 624856 . - . ID=Thaps11855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR7];external_name=Thaps11855;logic_name=jgi_thaps3 chr22 ensembl transcript 624350 624856 . - . ID=Thaps11855;Parent=Thaps11855;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 624350 624856 . - 0 ID=Thaps11855;Parent=Thaps11855;rank=1 chr22 . exon 624350 624856 . - . ID=Thaps11855.1;Parent=Thaps11855;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 628426 630063 . + . ID=Thaps25755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR8];external_name=Thaps25755;logic_name=jgi_thaps3 chr22 ensembl transcript 628426 630063 . + . ID=Thaps25755;Parent=Thaps25755;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 628426 630063 . + 0 ID=Thaps25755;Parent=Thaps25755;rank=1 chr22 . exon 628426 630063 . + . ID=Thaps25755.1;Parent=Thaps25755;constitutive=1;rank=1 chr22 . repeat_region 636990 637246 . - . description=TE2c_TP chr22 ensembl protein_coding_gene 633838 634848 . + . ID=Thaps11858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFS1];external_name=Thaps11858;logic_name=jgi_thaps3 chr22 ensembl transcript 633838 634848 . + . ID=Thaps11858;Parent=Thaps11858;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 633838 634848 . + 0 ID=Thaps11858;Parent=Thaps11858;rank=1 chr22 . exon 633838 634848 . + . ID=Thaps11858.1;Parent=Thaps11858;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 631222 631440 . + . ID=Thaps19963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFR9];external_name=Thaps19963;logic_name=jgi_thaps3 chr22 ensembl transcript 631222 631440 . + . ID=Thaps19963;Parent=Thaps19963;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 631222 631440 . + 0 ID=Thaps19963;Parent=Thaps19963;rank=1 chr22 . exon 631222 631440 . + . ID=Thaps19963.1;Parent=Thaps19963;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 632038 632913 . - . ID=Thaps264837;biotype=protein_coding;description=Sur1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFS0];external_name=Thaps264837;logic_name=jgi_thaps3 chr22 ensembl transcript 632038 632913 . - . ID=Thaps264837;Parent=Thaps264837;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 632038 632913 . - 0 ID=Thaps264837;Parent=Thaps264837;rank=1 chr22 . exon 632038 632913 . - . ID=Thaps264837.1;Parent=Thaps264837;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 636307 636671 . - . ID=Thaps264838;biotype=protein_coding;description=Putative uncharacterized protein HSF31 [Source:UniProtKB/TrEMBL%3BAcc:B8CFS2];external_name=HSF31;logic_name=jgi_thaps3 chr22 ensembl transcript 636307 636671 . - . ID=Thaps264838;Parent=Thaps264838;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 636307 636671 . - 0 ID=Thaps264838;Parent=Thaps264838;rank=1 chr22 . exon 636307 636671 . - . ID=Thaps264838.1;Parent=Thaps264838;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . repeat_region 637247 647218 . ? . description=dust chr22 . repeat_region 647219 650843 . ? . description=trf chr22 . repeat_region 655632 656026 . + . description=Copia5LTR_TP chr22 . repeat_region 656027 662121 . + . description=Copia5I_TP chr22 ensembl protein_coding_gene 651274 652089 . + . ID=Thaps11860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFS3];external_name=Thaps11860;logic_name=jgi_thaps3 chr22 ensembl transcript 651274 652089 . + . ID=Thaps11860;Parent=Thaps11860;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 651274 652089 . + 0 ID=Thaps11860;Parent=Thaps11860;rank=1 chr22 . exon 651274 652089 . + . ID=Thaps11860.1;Parent=Thaps11860;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 653200 654649 . - . ID=Thaps38656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFS4];external_name=Thaps38656;logic_name=jgi_thaps3 chr22 ensembl transcript 653200 654649 . - . ID=Thaps38656;Parent=Thaps38656;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 653200 653803 . - 0 ID=Thaps38656;Parent=Thaps38656;rank=3 chr22 . exon 653200 653803 . - . ID=Thaps38656.3;Parent=Thaps38656;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 653891 654117 . - 0 ID=Thaps38656;Parent=Thaps38656;rank=2 chr22 . exon 653891 654117 . - . ID=Thaps38656.2;Parent=Thaps38656;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 654212 654649 . - 0 ID=Thaps38656;Parent=Thaps38656;rank=1 chr22 . exon 654212 654649 . - . ID=Thaps38656.1;Parent=Thaps38656;constitutive=1;rank=1 chr22 . repeat_region 662259 662314 . ? . description=trf chr22 . repeat_region 662265 662318 . ? . description=trf chr22 . repeat_region 668293 668363 . ? . description=trf chr22 ensembl protein_coding_gene 663238 667416 . + . ID=Thaps25757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFS5];external_name=Thaps25757;logic_name=jgi_thaps3 chr22 ensembl transcript 663238 667416 . + . ID=Thaps25757;Parent=Thaps25757;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 663238 664614 . + 0 ID=Thaps25757;Parent=Thaps25757;rank=1 chr22 . exon 663238 664614 . + . ID=Thaps25757.1;Parent=Thaps25757;constitutive=1;rank=1 chr22 . CDS 664695 665467 . + 0 ID=Thaps25757;Parent=Thaps25757;rank=2 chr22 . exon 664695 665467 . + . ID=Thaps25757.2;Parent=Thaps25757;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 665574 665676 . + 0 ID=Thaps25757;Parent=Thaps25757;rank=3 chr22 . exon 665574 665676 . + . ID=Thaps25757.3;Parent=Thaps25757;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 665761 667416 . + 0 ID=Thaps25757;Parent=Thaps25757;rank=4 chr22 . exon 665761 667416 . + . ID=Thaps25757.4;Parent=Thaps25757;constitutive=1;rank=4 chr22 ensembl protein_coding_gene 670941 673585 . + . ID=Thaps11864;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFS6];external_name=Thaps11864;logic_name=jgi_thaps3 chr22 ensembl transcript 670941 673585 . + . ID=Thaps11864;Parent=Thaps11864;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 670941 671915 . + 0 ID=Thaps11864;Parent=Thaps11864;rank=1 chr22 . exon 670941 671915 . + . ID=Thaps11864.1;Parent=Thaps11864;constitutive=1;rank=1 chr22 . CDS 672072 672157 . + 0 ID=Thaps11864;Parent=Thaps11864;rank=2 chr22 . exon 672072 672157 . + . ID=Thaps11864.2;Parent=Thaps11864;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 672199 673585 . + 0 ID=Thaps11864;Parent=Thaps11864;rank=3 chr22 . exon 672199 673585 . + . ID=Thaps11864.3;Parent=Thaps11864;constitutive=1;ensembl_end_phase=1;rank=3 chr22 ensembl protein_coding_gene 673693 682629 . + . ID=Thaps11865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFS7];external_name=Thaps11865;logic_name=jgi_thaps3 chr22 ensembl transcript 673693 682629 . + . ID=Thaps11865;Parent=Thaps11865;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 673693 675335 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=1 chr22 . exon 673693 675335 . + . ID=Thaps11865.1;Parent=Thaps11865;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 675366 675607 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=2 chr22 . exon 675366 675607 . + . ID=Thaps11865.2;Parent=Thaps11865;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 675639 679776 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=3 chr22 . exon 675639 679776 . + . ID=Thaps11865.3;Parent=Thaps11865;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 680133 680448 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=4 chr22 . CDS 680552 680838 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=5 chr22 . CDS 681332 681521 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=6 chr22 . CDS 681608 681848 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=7 chr22 . CDS 681931 682137 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=8 chr22 . CDS 682218 682376 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=9 chr22 . CDS 682586 682629 . + 0 ID=Thaps11865;Parent=Thaps11865;rank=10 chr22 . repeat_region 683325 683473 . + . description=SAT1_TP chr22 . repeat_region 683490 684323 . ? . description=trf chr22 . repeat_region 683493 683647 . + . description=SAT1_TP chr22 . repeat_region 683645 683806 . + . description=SAT1_TP chr22 . repeat_region 683807 683972 . + . description=SAT1_TP chr22 . repeat_region 683995 684158 . + . description=SAT1_TP chr22 . repeat_region 684177 684334 . + . description=SAT1_TP chr22 . repeat_region 684702 685730 . ? . description=trf chr22 . exon 680133 680448 . + . ID=Thaps11865.4;Parent=Thaps11865;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . exon 680552 680838 . + . ID=Thaps11865.5;Parent=Thaps11865;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . exon 681332 681521 . + . ID=Thaps11865.6;Parent=Thaps11865;constitutive=1;ensembl_end_phase=1;rank=6 chr22 . exon 681608 681848 . + . ID=Thaps11865.7;Parent=Thaps11865;constitutive=1;ensembl_end_phase=1;rank=7 chr22 . exon 681931 682137 . + . ID=Thaps11865.8;Parent=Thaps11865;constitutive=1;rank=8 chr22 . exon 682218 682376 . + . ID=Thaps11865.9;Parent=Thaps11865;constitutive=1;rank=9 chr22 . exon 682586 682629 . + . ID=Thaps11865.10;Parent=Thaps11865;constitutive=1;ensembl_end_phase=2;rank=10 chr22 ensembl protein_coding_gene 686784 688406 . - . ID=Thaps30701;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFS8];external_name=Thaps30701;logic_name=jgi_thaps3 chr22 ensembl transcript 686784 688406 . - . ID=Thaps30701;Parent=Thaps30701;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 686784 686901 . - 0 ID=Thaps30701;Parent=Thaps30701;rank=4 chr22 . exon 686784 686901 . - . ID=Thaps30701.4;Parent=Thaps30701;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 686988 687587 . - 0 ID=Thaps30701;Parent=Thaps30701;rank=3 chr22 . exon 686988 687587 . - . ID=Thaps30701.3;Parent=Thaps30701;constitutive=1;rank=3 chr22 . CDS 687675 687901 . - 0 ID=Thaps30701;Parent=Thaps30701;rank=2 chr22 . exon 687675 687901 . - . ID=Thaps30701.2;Parent=Thaps30701;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 687996 688406 . - 0 ID=Thaps30701;Parent=Thaps30701;rank=1 chr22 . exon 687996 688406 . - . ID=Thaps30701.1;Parent=Thaps30701;constitutive=1;rank=1 chr22 . biological_region 689027 689029 0.999 - . logic_name=eponine chr22 . repeat_region 691683 691744 . ? . description=dust chr22 . repeat_region 692656 692663 . ? . description=dust chr22 . repeat_region 694164 694226 . ? . description=dust chr22 ensembl protein_coding_gene 691272 692502 . + . ID=Thaps11867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFS9];external_name=Thaps11867;logic_name=jgi_thaps3 chr22 ensembl transcript 691272 692502 . + . ID=Thaps11867;Parent=Thaps11867;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 691272 691320 . + 0 ID=Thaps11867;Parent=Thaps11867;rank=1 chr22 . exon 691272 691320 . + . ID=Thaps11867.1;Parent=Thaps11867;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 691415 692502 . + 0 ID=Thaps11867;Parent=Thaps11867;rank=2 chr22 . exon 691415 692502 . + . ID=Thaps11867.2;Parent=Thaps11867;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 693760 694275 . + . ID=Thaps11868;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS4];external_name=Thaps11868;logic_name=jgi_thaps3 chr22 ensembl transcript 693760 694275 . + . ID=Thaps11868;Parent=Thaps11868;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 693760 694275 . + 0 ID=Thaps11868;Parent=Thaps11868;rank=1 chr22 . exon 693760 694275 . + . ID=Thaps11868.1;Parent=Thaps11868;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 694923 698582 . + . ID=Thaps11869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFT1];external_name=Thaps11869;logic_name=jgi_thaps3 chr22 ensembl transcript 694923 698582 . + . ID=Thaps11869;Parent=Thaps11869;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 694923 698582 . + 0 ID=Thaps11869;Parent=Thaps11869;rank=1 chr22 . exon 694923 698582 . + . ID=Thaps11869.1;Parent=Thaps11869;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 707307 707837 . + . ID=Thaps11871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFT3];external_name=Thaps11871;logic_name=jgi_thaps3 chr22 ensembl transcript 707307 707837 . + . ID=Thaps11871;Parent=Thaps11871;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 707307 707837 . + 0 ID=Thaps11871;Parent=Thaps11871;rank=1 chr22 . exon 707307 707837 . + . ID=Thaps11871.1;Parent=Thaps11871;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 703911 705128 . - . ID=Thaps264846;biotype=protein_coding;description=Papain cysteine protease [Source:UniProtKB/TrEMBL%3BAcc:B8CFT2];external_name=Thaps264846;logic_name=jgi_thaps3 chr22 ensembl transcript 703911 705128 . - . ID=Thaps264846;Parent=Thaps264846;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 703911 704298 . - 0 ID=Thaps264846;Parent=Thaps264846;rank=4 chr22 . exon 703911 704298 . - . ID=Thaps264846.4;Parent=Thaps264846;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 704347 704581 . - 0 ID=Thaps264846;Parent=Thaps264846;rank=3 chr22 . exon 704347 704581 . - . ID=Thaps264846.3;Parent=Thaps264846;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 704659 704786 . - 0 ID=Thaps264846;Parent=Thaps264846;rank=2 chr22 . exon 704659 704786 . - . ID=Thaps264846.2;Parent=Thaps264846;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 704913 705128 . - 0 ID=Thaps264846;Parent=Thaps264846;rank=1 chr22 . exon 704913 705128 . - . ID=Thaps264846.1;Parent=Thaps264846;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 713796 718262 . - . ID=Thaps25762;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFT7];external_name=Thaps25762;logic_name=jgi_thaps3 chr22 ensembl transcript 713796 718262 . - . ID=Thaps25762;Parent=Thaps25762;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 713796 718262 . - 0 ID=Thaps25762;Parent=Thaps25762;rank=1 chr22 . exon 713796 718262 . - . ID=Thaps25762.1;Parent=Thaps25762;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 709623 709981 . + . ID=Thaps264847;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFT5];external_name=Thaps264847;logic_name=jgi_thaps3 chr22 ensembl transcript 709623 709981 . + . ID=Thaps264847;Parent=Thaps264847;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 709623 709981 . + 0 ID=Thaps264847;Parent=Thaps264847;rank=1 chr22 . exon 709623 709981 . + . ID=Thaps264847.1;Parent=Thaps264847;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 711615 712208 . + . ID=Thaps38616;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFT6];external_name=Thaps38616;logic_name=jgi_thaps3 chr22 ensembl transcript 711615 712208 . + . ID=Thaps38616;Parent=Thaps38616;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 711615 711793 . + 0 ID=Thaps38616;Parent=Thaps38616;rank=1 chr22 . exon 711615 711793 . + . ID=Thaps38616.1;Parent=Thaps38616;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 711863 712061 . + 0 ID=Thaps38616;Parent=Thaps38616;rank=2 chr22 . exon 711863 712061 . + . ID=Thaps38616.2;Parent=Thaps38616;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 712137 712208 . + 0 ID=Thaps38616;Parent=Thaps38616;rank=3 chr22 . exon 712137 712208 . + . ID=Thaps38616.3;Parent=Thaps38616;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 708518 708679 . + . ID=Thaps38767;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFT4];external_name=Thaps38767;logic_name=jgi_thaps3 chr22 ensembl transcript 708518 708679 . + . ID=Thaps38767;Parent=Thaps38767;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 708518 708679 . + 0 ID=Thaps38767;Parent=Thaps38767;rank=1 chr22 . exon 708518 708679 . + . ID=Thaps38767.1;Parent=Thaps38767;constitutive=1;rank=1 chr22 . repeat_region 721812 721819 . ? . description=dust chr22 . repeat_region 725404 725412 . ? . description=dust chr22 ensembl protein_coding_gene 718510 719833 . - . ID=Thaps11876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFT8];external_name=Thaps11876;logic_name=jgi_thaps3 chr22 ensembl transcript 718510 719833 . - . ID=Thaps11876;Parent=Thaps11876;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 718510 718620 . - 0 ID=Thaps11876;Parent=Thaps11876;rank=3 chr22 . exon 718510 718620 . - . ID=Thaps11876.3;Parent=Thaps11876;constitutive=1;rank=3 chr22 . CDS 718731 719150 . - 0 ID=Thaps11876;Parent=Thaps11876;rank=2 chr22 . exon 718731 719150 . - . ID=Thaps11876.2;Parent=Thaps11876;constitutive=1;rank=2 chr22 . CDS 719285 719833 . - 0 ID=Thaps11876;Parent=Thaps11876;rank=1 chr22 . exon 719285 719833 . - . ID=Thaps11876.1;Parent=Thaps11876;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 721821 725619 . - . ID=Thaps11878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFU0];external_name=Thaps11878;logic_name=jgi_thaps3 chr22 ensembl transcript 721821 725619 . - . ID=Thaps11878;Parent=Thaps11878;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 721821 721836 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=10 chr22 . exon 721821 721836 . - . ID=Thaps11878.10;Parent=Thaps11878;constitutive=1;ensembl_end_phase=1;rank=10 chr22 . CDS 721907 723022 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=9 chr22 . exon 721907 723022 . - . ID=Thaps11878.9;Parent=Thaps11878;constitutive=1;rank=9 chr22 . CDS 723103 723145 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=8 chr22 . exon 723103 723145 . - . ID=Thaps11878.8;Parent=Thaps11878;constitutive=1;ensembl_end_phase=1;rank=8 chr22 . CDS 723239 723812 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=7 chr22 . exon 723239 723812 . - . ID=Thaps11878.7;Parent=Thaps11878;constitutive=1;ensembl_end_phase=1;rank=7 chr22 . CDS 723960 724054 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=6 chr22 . exon 723960 724054 . - . ID=Thaps11878.6;Parent=Thaps11878;constitutive=1;ensembl_end_phase=2;rank=6 chr22 . CDS 724127 724152 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=5 chr22 . exon 724127 724152 . - . ID=Thaps11878.5;Parent=Thaps11878;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . CDS 724308 724727 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=4 chr22 . exon 724308 724727 . - . ID=Thaps11878.4;Parent=Thaps11878;constitutive=1;rank=4 chr22 . CDS 724751 725038 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=3 chr22 . exon 724751 725038 . - . ID=Thaps11878.3;Parent=Thaps11878;constitutive=1;rank=3 chr22 . CDS 725165 725440 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=2 chr22 . exon 725165 725440 . - . ID=Thaps11878.2;Parent=Thaps11878;constitutive=1;rank=2 chr22 . CDS 725465 725619 . - 0 ID=Thaps11878;Parent=Thaps11878;rank=1 chr22 . exon 725465 725619 . - . ID=Thaps11878.1;Parent=Thaps11878;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 727027 727990 . - . ID=Thaps11879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFU1];external_name=Thaps11879;logic_name=jgi_thaps3 chr22 ensembl transcript 727027 727990 . - . ID=Thaps11879;Parent=Thaps11879;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 727027 727582 . - 0 ID=Thaps11879;Parent=Thaps11879;rank=2 chr22 . exon 727027 727582 . - . ID=Thaps11879.2;Parent=Thaps11879;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 727698 727990 . - 0 ID=Thaps11879;Parent=Thaps11879;rank=1 chr22 . exon 727698 727990 . - . ID=Thaps11879.1;Parent=Thaps11879;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 720504 721619 . + . ID=Thaps38609;biotype=protein_coding;description=Histone deacetylase Rpd3 HDA2 HDA1 HDAC HD2 [Source:UniProtKB/TrEMBL%3BAcc:B8CFT9];external_name=Thaps38609;logic_name=jgi_thaps3 chr22 ensembl transcript 720504 721619 . + . ID=Thaps38609;Parent=Thaps38609;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 720504 721013 . + 0 ID=Thaps38609;Parent=Thaps38609;rank=1 chr22 . exon 720504 721013 . + . ID=Thaps38609.1;Parent=Thaps38609;constitutive=1;rank=1 chr22 . CDS 721083 721619 . + 0 ID=Thaps38609;Parent=Thaps38609;rank=2 chr22 . exon 721083 721619 . + . ID=Thaps38609.2;Parent=Thaps38609;constitutive=1;rank=2 chr22 . repeat_region 737392 737416 . ? . description=trf chr22 . repeat_region 737509 737822 . - . description=Harbinger2N_TP chr22 ensembl protein_coding_gene 730707 732326 . - . ID=Thaps26470;biotype=protein_coding;description=Gdp-fucose synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CFU3];external_name=GFS1;logic_name=jgi_thaps3 chr22 ensembl transcript 730707 732326 . - . ID=Thaps26470;Parent=Thaps26470;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 730707 731423 . - 0 ID=Thaps26470;Parent=Thaps26470;rank=2 chr22 . exon 730707 731423 . - . ID=Thaps26470.2;Parent=Thaps26470;constitutive=1;rank=2 chr22 . CDS 732069 732326 . - 0 ID=Thaps26470;Parent=Thaps26470;rank=1 chr22 . exon 732069 732326 . - . ID=Thaps26470.1;Parent=Thaps26470;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 733793 736160 . - . ID=Thaps264851;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFU4];external_name=Thaps264851;logic_name=jgi_thaps3 chr22 ensembl transcript 733793 736160 . - . ID=Thaps264851;Parent=Thaps264851;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 733793 734049 . - 0 ID=Thaps264851;Parent=Thaps264851;rank=4 chr22 . exon 733793 734049 . - . ID=Thaps264851.4;Parent=Thaps264851;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . CDS 734126 735488 . - 0 ID=Thaps264851;Parent=Thaps264851;rank=3 chr22 . exon 734126 735488 . - . ID=Thaps264851.3;Parent=Thaps264851;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 735567 735930 . - 0 ID=Thaps264851;Parent=Thaps264851;rank=2 chr22 . exon 735567 735930 . - . ID=Thaps264851.2;Parent=Thaps264851;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 736019 736160 . - 0 ID=Thaps264851;Parent=Thaps264851;rank=1 chr22 . exon 736019 736160 . - . ID=Thaps264851.1;Parent=Thaps264851;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 728711 730141 . - . ID=Thaps38602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFU2];external_name=Thaps38602;logic_name=jgi_thaps3 chr22 ensembl transcript 728711 730141 . - . ID=Thaps38602;Parent=Thaps38602;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 728711 729759 . - 0 ID=Thaps38602;Parent=Thaps38602;rank=2 chr22 . exon 728711 729759 . - . ID=Thaps38602.2;Parent=Thaps38602;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 729895 730141 . - 0 ID=Thaps38602;Parent=Thaps38602;rank=1 chr22 . exon 729895 730141 . - . ID=Thaps38602.1;Parent=Thaps38602;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . repeat_region 738460 738500 . ? . description=dust chr22 . repeat_region 745170 745224 . ? . description=dust chr22 ensembl protein_coding_gene 744429 746632 . + . ID=Thaps13224;biotype=protein_coding;description=Polyadenlyte binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFU7];external_name=PABA;logic_name=jgi_thaps3 chr22 ensembl transcript 744429 746632 . + . ID=Thaps13224;Parent=Thaps13224;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 744429 745074 . + 0 ID=Thaps13224;Parent=Thaps13224;rank=1 chr22 . exon 744429 745074 . + . ID=Thaps13224.1;Parent=Thaps13224;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 745334 745867 . + 0 ID=Thaps13224;Parent=Thaps13224;rank=2 chr22 . exon 745334 745867 . + . ID=Thaps13224.2;Parent=Thaps13224;constitutive=1;rank=2 chr22 . CDS 745901 746202 . + 0 ID=Thaps13224;Parent=Thaps13224;rank=3 chr22 . exon 745901 746202 . + . ID=Thaps13224.3;Parent=Thaps13224;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 746279 746632 . + 0 ID=Thaps13224;Parent=Thaps13224;rank=4 chr22 . exon 746279 746632 . + . ID=Thaps13224.4;Parent=Thaps13224;constitutive=1;rank=4 chr22 ensembl protein_coding_gene 739407 741575 . + . ID=Thaps25766;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFU5];external_name=Thaps25766;logic_name=jgi_thaps3 chr22 ensembl transcript 739407 741575 . + . ID=Thaps25766;Parent=Thaps25766;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 739407 739779 . + 0 ID=Thaps25766;Parent=Thaps25766;rank=1 chr22 . exon 739407 739779 . + . ID=Thaps25766.1;Parent=Thaps25766;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 739878 740973 . + 0 ID=Thaps25766;Parent=Thaps25766;rank=2 chr22 . exon 739878 740973 . + . ID=Thaps25766.2;Parent=Thaps25766;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 741410 741575 . + 0 ID=Thaps25766;Parent=Thaps25766;rank=3 chr22 . exon 741410 741575 . + . ID=Thaps25766.3;Parent=Thaps25766;constitutive=1;ensembl_end_phase=1;rank=3 chr22 ensembl protein_coding_gene 741940 743796 . + . ID=Thaps25767;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFU6];external_name=Thaps25767;logic_name=jgi_thaps3 chr22 ensembl transcript 741940 743796 . + . ID=Thaps25767;Parent=Thaps25767;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 741940 743796 . + 0 ID=Thaps25767;Parent=Thaps25767;rank=1 chr22 . exon 741940 743796 . + . ID=Thaps25767.1;Parent=Thaps25767;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 747029 748570 . - . ID=Thaps43076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFU8];external_name=Thaps43076;logic_name=jgi_thaps3 chr22 ensembl transcript 747029 748570 . - . ID=Thaps43076;Parent=Thaps43076;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 747029 747112 . - 0 ID=Thaps43076;Parent=Thaps43076;rank=4 chr22 . exon 747029 747112 . - . ID=Thaps43076.4;Parent=Thaps43076;constitutive=1;rank=4 chr22 . CDS 747206 747552 . - 0 ID=Thaps43076;Parent=Thaps43076;rank=3 chr22 . exon 747206 747552 . - . ID=Thaps43076.3;Parent=Thaps43076;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 747700 747916 . - 0 ID=Thaps43076;Parent=Thaps43076;rank=2 chr22 . exon 747700 747916 . - . ID=Thaps43076.2;Parent=Thaps43076;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 747980 748570 . - 0 ID=Thaps43076;Parent=Thaps43076;rank=1 chr22 . exon 747980 748570 . - . ID=Thaps43076.1;Parent=Thaps43076;constitutive=1;rank=1 chr22 . repeat_region 748889 749018 . ? . description=trf chr22 . repeat_region 748947 749009 . ? . description=trf chr22 . repeat_region 755364 755391 . ? . description=trf chr22 ensembl protein_coding_gene 749452 750336 . - . ID=Thaps11887;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFU9];external_name=Thaps11887;logic_name=jgi_thaps3 chr22 ensembl transcript 749452 750336 . - . ID=Thaps11887;Parent=Thaps11887;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 749452 750336 . - 0 ID=Thaps11887;Parent=Thaps11887;rank=1 chr22 . exon 749452 750336 . - . ID=Thaps11887.1;Parent=Thaps11887;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 752870 753549 . - . ID=Thaps264853;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV0];external_name=MYB5;logic_name=jgi_thaps3 chr22 ensembl transcript 752870 753549 . - . ID=Thaps264853;Parent=Thaps264853;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 752870 752944 . - 0 ID=Thaps264853;Parent=Thaps264853;rank=3 chr22 . exon 752870 752944 . - . ID=Thaps264853.3;Parent=Thaps264853;constitutive=1;rank=3 chr22 . CDS 753049 753434 . - 0 ID=Thaps264853;Parent=Thaps264853;rank=2 chr22 . exon 753049 753434 . - . ID=Thaps264853.2;Parent=Thaps264853;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 753535 753549 . - 0 ID=Thaps264853;Parent=Thaps264853;rank=1 chr22 . exon 753535 753549 . - . ID=Thaps264853.1;Parent=Thaps264853;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 767587 773472 . - . ID=Thaps38752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV1];external_name=Thaps38752;logic_name=jgi_thaps3 chr22 ensembl transcript 767587 773472 . - . ID=Thaps38752;Parent=Thaps38752;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 767587 767649 . - 0 ID=Thaps38752;Parent=Thaps38752;rank=4 chr22 . exon 767587 767649 . - . ID=Thaps38752.4;Parent=Thaps38752;constitutive=1;rank=4 chr22 . CDS 770461 770603 . - 0 ID=Thaps38752;Parent=Thaps38752;rank=3 chr22 . CDS 771366 771536 . - 0 ID=Thaps38752;Parent=Thaps38752;rank=2 chr22 . CDS 773079 773472 . - 0 ID=Thaps38752;Parent=Thaps38752;rank=1 chr22 . repeat_region 773479 793176 . ? . description=dust chr22 . exon 770461 770603 . - . ID=Thaps38752.3;Parent=Thaps38752;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . exon 771366 771536 . - . ID=Thaps38752.2;Parent=Thaps38752;constitutive=1;rank=2 chr22 . exon 773079 773472 . - . ID=Thaps38752.1;Parent=Thaps38752;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . repeat_region 773479 793176 . ? . description=dust chr22 . repeat_region 793177 794083 . ? . description=dust chr22 . repeat_region 794394 795099 . - . description=Copia7I_TP chr22 . biological_region 794940 794942 0.999 + . logic_name=eponine chr22 . repeat_region 797503 797558 . ? . description=trf chr22 . repeat_region 797905 799444 . + . description=tp3_ASNotSingleton chr22 ensembl protein_coding_gene 795113 797676 . + . ID=Thaps25771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV2];external_name=Thaps25771;logic_name=jgi_thaps3 chr22 ensembl transcript 795113 797676 . + . ID=Thaps25771;Parent=Thaps25771;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 795113 795743 . + 0 ID=Thaps25771;Parent=Thaps25771;rank=1 chr22 . exon 795113 795743 . + . ID=Thaps25771.1;Parent=Thaps25771;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 795819 797626 . + 0 ID=Thaps25771;Parent=Thaps25771;rank=2 chr22 . exon 795819 797626 . + . ID=Thaps25771.2;Parent=Thaps25771;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 797650 797676 . + 0 ID=Thaps25771;Parent=Thaps25771;rank=3 chr22 . exon 797650 797676 . + . ID=Thaps25771.3;Parent=Thaps25771;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 804575 806251 . + . ID=Thaps25772;biotype=protein_coding;description=Actin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV4];external_name=ACT1;logic_name=jgi_thaps3 chr22 ensembl transcript 804575 806251 . + . ID=Thaps25772;Parent=Thaps25772;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 804575 804635 . + 0 ID=Thaps25772;Parent=Thaps25772;rank=1 chr22 . exon 804575 804635 . + . ID=Thaps25772.1;Parent=Thaps25772;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 805089 805165 . + 0 ID=Thaps25772;Parent=Thaps25772;rank=2 chr22 . exon 805089 805165 . + . ID=Thaps25772.2;Parent=Thaps25772;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 805256 806251 . + 0 ID=Thaps25772;Parent=Thaps25772;rank=3 chr22 . exon 805256 806251 . + . ID=Thaps25772.3;Parent=Thaps25772;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 806689 808377 . - . ID=Thaps25773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV5];external_name=Thaps25773;logic_name=jgi_thaps3 chr22 ensembl transcript 806689 808377 . - . ID=Thaps25773;Parent=Thaps25773;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 806689 808377 . - 0 ID=Thaps25773;Parent=Thaps25773;rank=1 chr22 . exon 806689 808377 . - . ID=Thaps25773.1;Parent=Thaps25773;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 802048 803730 . + . ID=Thaps264854;biotype=protein_coding;description=Dual-specificity tyrosine-phosphorylation regulated kinase 1a-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV3];external_name=Thaps264854;logic_name=jgi_thaps3 chr22 ensembl transcript 802048 803730 . + . ID=Thaps264854;Parent=Thaps264854;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 802048 802168 . + 0 ID=Thaps264854;Parent=Thaps264854;rank=1 chr22 . exon 802048 802168 . + . ID=Thaps264854.1;Parent=Thaps264854;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 802374 802712 . + 0 ID=Thaps264854;Parent=Thaps264854;rank=2 chr22 . exon 802374 802712 . + . ID=Thaps264854.2;Parent=Thaps264854;constitutive=1;rank=2 chr22 . CDS 802814 803274 . + 0 ID=Thaps264854;Parent=Thaps264854;rank=3 chr22 . exon 802814 803274 . + . ID=Thaps264854.3;Parent=Thaps264854;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 803390 803730 . + 0 ID=Thaps264854;Parent=Thaps264854;rank=4 chr22 . exon 803390 803730 . + . ID=Thaps264854.4;Parent=Thaps264854;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . repeat_region 811301 811316 . ? . description=dust chr22 . repeat_region 811914 811941 . ? . description=dust chr22 . repeat_region 814717 814737 . ? . description=trf chr22 . repeat_region 814717 814737 . ? . description=dust chr22 . repeat_region 816341 816367 . ? . description=trf chr22 . repeat_region 816341 816367 . ? . description=dust chr22 ensembl protein_coding_gene 814587 815537 . - . ID=Thaps11896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV8];external_name=Thaps11896;logic_name=jgi_thaps3 chr22 ensembl transcript 814587 815537 . - . ID=Thaps11896;Parent=Thaps11896;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 814587 815537 . - 0 ID=Thaps11896;Parent=Thaps11896;rank=1 chr22 . exon 814587 815537 . - . ID=Thaps11896.1;Parent=Thaps11896;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 816465 828441 . + . ID=Thaps11897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV9];external_name=Thaps11897;logic_name=jgi_thaps3 chr22 ensembl transcript 816465 828441 . + . ID=Thaps11897;Parent=Thaps11897;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 816465 817166 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=1 chr22 . exon 816465 817166 . + . ID=Thaps11897.1;Parent=Thaps11897;constitutive=1;rank=1 chr22 . CDS 817292 818115 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=2 chr22 . exon 817292 818115 . + . ID=Thaps11897.2;Parent=Thaps11897;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 818204 818915 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=3 chr22 . CDS 819004 819419 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=4 chr22 . CDS 819502 819560 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=5 chr22 . CDS 819655 820503 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=6 chr22 . CDS 820543 820838 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=7 chr22 . CDS 820912 821685 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=8 chr22 . CDS 821771 822614 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=9 chr22 . CDS 822703 822886 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=10 chr22 . CDS 822978 823145 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=11 chr22 . CDS 823232 823295 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=12 chr22 . CDS 823376 823529 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=13 chr22 . CDS 823617 824149 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=14 chr22 . CDS 824234 824918 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=15 chr22 . CDS 824996 825062 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=16 chr22 . CDS 825151 825234 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=17 chr22 . CDS 825319 825436 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=18 chr22 . CDS 825532 825601 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=19 chr22 . CDS 825679 826442 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=20 chr22 . CDS 826539 827953 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=21 chr22 . CDS 828051 828441 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=22 chr22 ensembl protein_coding_gene 811901 813793 . + . ID=Thaps25775;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV7];external_name=Thaps25775;logic_name=jgi_thaps3 chr22 ensembl transcript 811901 813793 . + . ID=Thaps25775;Parent=Thaps25775;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 811901 812561 . + 0 ID=Thaps25775;Parent=Thaps25775;rank=1 chr22 . exon 811901 812561 . + . ID=Thaps25775.1;Parent=Thaps25775;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 812667 813793 . + 0 ID=Thaps25775;Parent=Thaps25775;rank=2 chr22 . exon 812667 813793 . + . ID=Thaps25775.2;Parent=Thaps25775;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 809839 811191 . - . ID=Thaps26473;biotype=protein_coding;description=Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8CFV6];external_name=Thaps26473;logic_name=jgi_thaps3 chr22 ensembl transcript 809839 811191 . - . ID=Thaps26473;Parent=Thaps26473;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 809839 810612 . - 0 ID=Thaps26473;Parent=Thaps26473;rank=3 chr22 . exon 809839 810612 . - . ID=Thaps26473.3;Parent=Thaps26473;constitutive=1;rank=3 chr22 . CDS 810841 810968 . - 0 ID=Thaps26473;Parent=Thaps26473;rank=2 chr22 . exon 810841 810968 . - . ID=Thaps26473.2;Parent=Thaps26473;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 811179 811191 . - 0 ID=Thaps26473;Parent=Thaps26473;rank=1 chr22 . exon 811179 811191 . - . ID=Thaps26473.1;Parent=Thaps26473;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . exon 818204 818915 . + . ID=Thaps11897.3;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . exon 819004 819419 . + . ID=Thaps11897.4;Parent=Thaps11897;constitutive=1;ensembl_end_phase=2;rank=4 chr22 . exon 819502 819560 . + . ID=Thaps11897.5;Parent=Thaps11897;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . exon 819655 820503 . + . ID=Thaps11897.6;Parent=Thaps11897;constitutive=1;rank=6 chr22 . exon 820543 820838 . + . ID=Thaps11897.7;Parent=Thaps11897;constitutive=1;ensembl_end_phase=2;rank=7 chr22 . exon 820912 821685 . + . ID=Thaps11897.8;Parent=Thaps11897;constitutive=1;rank=8 chr22 . exon 821771 822614 . + . ID=Thaps11897.9;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=9 chr22 . exon 822703 822886 . + . ID=Thaps11897.10;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=10 chr22 . exon 822978 823145 . + . ID=Thaps11897.11;Parent=Thaps11897;constitutive=1;rank=11 chr22 . exon 823232 823295 . + . ID=Thaps11897.12;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=12 chr22 . exon 823376 823529 . + . ID=Thaps11897.13;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=13 chr22 . exon 823617 824149 . + . ID=Thaps11897.14;Parent=Thaps11897;constitutive=1;ensembl_end_phase=2;rank=14 chr22 . exon 824234 824918 . + . ID=Thaps11897.15;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=15 chr22 . exon 824996 825062 . + . ID=Thaps11897.16;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=16 chr22 . exon 825151 825234 . + . ID=Thaps11897.17;Parent=Thaps11897;constitutive=1;rank=17 chr22 . exon 825319 825436 . + . ID=Thaps11897.18;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=18 chr22 . exon 825532 825601 . + . ID=Thaps11897.19;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=19 chr22 . exon 825679 826442 . + . ID=Thaps11897.20;Parent=Thaps11897;constitutive=1;ensembl_end_phase=2;rank=20 chr22 . exon 826539 827953 . + . ID=Thaps11897.21;Parent=Thaps11897;constitutive=1;ensembl_end_phase=2;rank=21 chr22 . exon 828051 828441 . + . ID=Thaps11897.22;Parent=Thaps11897;constitutive=1;ensembl_end_phase=1;rank=22 chr22 . repeat_region 829671 829701 . ? . description=trf chr22 . repeat_region 829671 829701 . ? . description=dust chr22 . repeat_region 831115 831139 . ? . description=trf chr22 . repeat_region 831115 831139 . ? . description=dust chr22 . repeat_region 833298 833321 . ? . description=dust chr22 . repeat_region 837339 837346 . ? . description=dust chr22 ensembl protein_coding_gene 816465 828441 . + . ID=Thaps11897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFV9];external_name=Thaps11897;logic_name=jgi_thaps3 chr22 ensembl transcript 816465 828441 . + . ID=Thaps11897;Parent=Thaps11897;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 816465 817166 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=1 chr22 . CDS 817292 818115 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=2 chr22 . CDS 818204 818915 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=3 chr22 . CDS 819004 819419 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=4 chr22 . CDS 819502 819560 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=5 chr22 . CDS 819655 820503 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=6 chr22 . CDS 820543 820838 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=7 chr22 . CDS 820912 821685 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=8 chr22 . CDS 821771 822614 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=9 chr22 . CDS 822703 822886 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=10 chr22 . CDS 822978 823145 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=11 chr22 . CDS 823232 823295 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=12 chr22 . CDS 823376 823529 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=13 chr22 . CDS 823617 824149 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=14 chr22 . CDS 824234 824918 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=15 chr22 . CDS 824996 825062 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=16 chr22 . CDS 825151 825234 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=17 chr22 . CDS 825319 825436 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=18 chr22 . CDS 825532 825601 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=19 chr22 . CDS 825679 826442 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=20 chr22 . CDS 826539 827953 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=21 chr22 . CDS 828051 828441 . + 0 ID=Thaps11897;Parent=Thaps11897;rank=22 chr22 ensembl protein_coding_gene 837807 841885 . - . ID=Thaps11902;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFW4];external_name=Thaps11902;logic_name=jgi_thaps3 chr22 ensembl transcript 837807 841885 . - . ID=Thaps11902;Parent=Thaps11902;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 837807 838399 . - 0 ID=Thaps11902;Parent=Thaps11902;rank=3 chr22 . exon 837807 838399 . - . ID=Thaps11902.3;Parent=Thaps11902;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 838502 838794 . - 0 ID=Thaps11902;Parent=Thaps11902;rank=2 chr22 . CDS 838878 841885 . - 0 ID=Thaps11902;Parent=Thaps11902;rank=1 chr22 ensembl protein_coding_gene 828562 831228 . - . ID=Thaps25776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFW0];external_name=Thaps25776;logic_name=jgi_thaps3 chr22 ensembl transcript 828562 831228 . - . ID=Thaps25776;Parent=Thaps25776;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 828562 831228 . - 0 ID=Thaps25776;Parent=Thaps25776;rank=1 chr22 . exon 828562 831228 . - . ID=Thaps25776.1;Parent=Thaps25776;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 831613 832905 . + . ID=Thaps25777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFW1];external_name=Thaps25777;logic_name=jgi_thaps3 chr22 ensembl transcript 831613 832905 . + . ID=Thaps25777;Parent=Thaps25777;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 831613 832905 . + 0 ID=Thaps25777;Parent=Thaps25777;rank=1 chr22 . exon 831613 832905 . + . ID=Thaps25777.1;Parent=Thaps25777;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 834412 836046 . + . ID=Thaps264858;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFW2];external_name=Thaps264858;logic_name=jgi_thaps3 chr22 ensembl transcript 834412 836046 . + . ID=Thaps264858;Parent=Thaps264858;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 834412 834977 . + 0 ID=Thaps264858;Parent=Thaps264858;rank=1 chr22 . exon 834412 834977 . + . ID=Thaps264858.1;Parent=Thaps264858;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 835014 836046 . + 0 ID=Thaps264858;Parent=Thaps264858;rank=2 chr22 . exon 835014 836046 . + . ID=Thaps264858.2;Parent=Thaps264858;constitutive=1;ensembl_end_phase=1;rank=2 chr22 ensembl protein_coding_gene 836475 837047 . - . ID=Thaps38583;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein 1 [Source:UniProtKB/TrEMBL%3BAcc:B8CFW3];external_name=LHCF2;logic_name=jgi_thaps3 chr22 ensembl transcript 836475 837047 . - . ID=Thaps38583;Parent=Thaps38583;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 836475 837047 . - 0 ID=Thaps38583;Parent=Thaps38583;rank=1 chr22 . exon 836475 837047 . - . ID=Thaps38583.1;Parent=Thaps38583;constitutive=1;rank=1 chr22 . exon 838502 838794 . - . ID=Thaps11902.2;Parent=Thaps11902;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . exon 838878 841885 . - . ID=Thaps11902.1;Parent=Thaps11902;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 847354 849896 . - . ID=Thaps11905;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFW6];external_name=Thaps11905;logic_name=jgi_thaps3 chr22 ensembl transcript 847354 849896 . - . ID=Thaps11905;Parent=Thaps11905;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 847354 847896 . - 0 ID=Thaps11905;Parent=Thaps11905;rank=3 chr22 . exon 847354 847896 . - . ID=Thaps11905.3;Parent=Thaps11905;constitutive=1;rank=3 chr22 . CDS 847983 848318 . - 0 ID=Thaps11905;Parent=Thaps11905;rank=2 chr22 . exon 847983 848318 . - . ID=Thaps11905.2;Parent=Thaps11905;constitutive=1;rank=2 chr22 . CDS 848436 849896 . - 0 ID=Thaps11905;Parent=Thaps11905;rank=1 chr22 ensembl protein_coding_gene 844257 846704 . - . ID=Thaps25779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFW5];external_name=Thaps25779;logic_name=jgi_thaps3 chr22 ensembl transcript 844257 846704 . - . ID=Thaps25779;Parent=Thaps25779;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 844257 846704 . - 0 ID=Thaps25779;Parent=Thaps25779;rank=1 chr22 . exon 844257 846704 . - . ID=Thaps25779.1;Parent=Thaps25779;constitutive=1;rank=1 chr22 . repeat_region 849700 849707 . ? . description=dust chr22 . exon 848436 849896 . - . ID=Thaps11905.1;Parent=Thaps11905;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 850362 853035 . + . ID=Thaps11906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFW7];external_name=Thaps11906;logic_name=jgi_thaps3 chr22 ensembl transcript 850362 853035 . + . ID=Thaps11906;Parent=Thaps11906;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 850362 850745 . + 0 ID=Thaps11906;Parent=Thaps11906;rank=1 chr22 . exon 850362 850745 . + . ID=Thaps11906.1;Parent=Thaps11906;constitutive=1;rank=1 chr22 . CDS 850889 851325 . + 0 ID=Thaps11906;Parent=Thaps11906;rank=2 chr22 . exon 850889 851325 . + . ID=Thaps11906.2;Parent=Thaps11906;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 851409 853035 . + 0 ID=Thaps11906;Parent=Thaps11906;rank=3 chr22 . exon 851409 853035 . + . ID=Thaps11906.3;Parent=Thaps11906;constitutive=1;ensembl_end_phase=1;rank=3 chr22 ensembl protein_coding_gene 853111 854626 . - . ID=Thaps11907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFW8];external_name=Thaps11907;logic_name=jgi_thaps3 chr22 ensembl transcript 853111 854626 . - . ID=Thaps11907;Parent=Thaps11907;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 853111 853167 . - 0 ID=Thaps11907;Parent=Thaps11907;rank=4 chr22 . exon 853111 853167 . - . ID=Thaps11907.4;Parent=Thaps11907;constitutive=1;rank=4 chr22 . CDS 853196 854170 . - 0 ID=Thaps11907;Parent=Thaps11907;rank=3 chr22 . exon 853196 854170 . - . ID=Thaps11907.3;Parent=Thaps11907;constitutive=1;rank=3 chr22 . CDS 854223 854422 . - 0 ID=Thaps11907;Parent=Thaps11907;rank=2 chr22 . exon 854223 854422 . - . ID=Thaps11907.2;Parent=Thaps11907;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 854536 854626 . - 0 ID=Thaps11907;Parent=Thaps11907;rank=1 chr22 . exon 854536 854626 . - . ID=Thaps11907.1;Parent=Thaps11907;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 854973 857270 . + . ID=Thaps270110;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFW9];external_name=Thaps270110;logic_name=jgi_thaps3 chr22 ensembl transcript 854973 857270 . + . ID=Thaps270110;Parent=Thaps270110;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 854973 855324 . + 0 ID=Thaps270110;Parent=Thaps270110;rank=1 chr22 . exon 854973 855324 . + . ID=Thaps270110.1;Parent=Thaps270110;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 855532 855720 . + 0 ID=Thaps270110;Parent=Thaps270110;rank=2 chr22 . exon 855532 855720 . + . ID=Thaps270110.2;Parent=Thaps270110;constitutive=1;rank=2 chr22 . CDS 855859 856367 . + 0 ID=Thaps270110;Parent=Thaps270110;rank=3 chr22 . exon 855859 856367 . + . ID=Thaps270110.3;Parent=Thaps270110;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 856578 857270 . + 0 ID=Thaps270110;Parent=Thaps270110;rank=4 chr22 . exon 856578 857270 . + . ID=Thaps270110.4;Parent=Thaps270110;constitutive=1;rank=4 chr22 . repeat_region 867499 867526 . ? . description=trf chr22 . repeat_region 867556 867611 . ? . description=trf chr22 ensembl protein_coding_gene 858501 862769 . - . ID=Thaps25781;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX0];external_name=Thaps25781;logic_name=jgi_thaps3 chr22 ensembl transcript 858501 862769 . - . ID=Thaps25781;Parent=Thaps25781;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 858501 862769 . - 0 ID=Thaps25781;Parent=Thaps25781;rank=1 chr22 . exon 858501 862769 . - . ID=Thaps25781.1;Parent=Thaps25781;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 864208 868959 . + . ID=Thaps25782;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX1];external_name=Thaps25782;logic_name=jgi_thaps3 chr22 ensembl transcript 864208 868959 . + . ID=Thaps25782;Parent=Thaps25782;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 864208 868959 . + 0 ID=Thaps25782;Parent=Thaps25782;rank=1 chr22 . exon 864208 868959 . + . ID=Thaps25782.1;Parent=Thaps25782;constitutive=1;rank=1 chr22 . repeat_region 876606 876664 . ? . description=dust chr22 ensembl protein_coding_gene 877670 878755 . + . ID=Thaps11913;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX5];external_name=Thaps11913;logic_name=jgi_thaps3 chr22 ensembl transcript 877670 878755 . + . ID=Thaps11913;Parent=Thaps11913;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 877670 878755 . + 0 ID=Thaps11913;Parent=Thaps11913;rank=1 chr22 . exon 877670 878755 . + . ID=Thaps11913.1;Parent=Thaps11913;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 873837 874832 . + . ID=Thaps264862;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX3];external_name=Thaps264862;logic_name=jgi_thaps3 chr22 ensembl transcript 873837 874832 . + . ID=Thaps264862;Parent=Thaps264862;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 873837 874016 . + 0 ID=Thaps264862;Parent=Thaps264862;rank=1 chr22 . exon 873837 874016 . + . ID=Thaps264862.1;Parent=Thaps264862;constitutive=1;rank=1 chr22 . CDS 874123 874213 . + 0 ID=Thaps264862;Parent=Thaps264862;rank=2 chr22 . exon 874123 874213 . + . ID=Thaps264862.2;Parent=Thaps264862;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 874460 874832 . + 0 ID=Thaps264862;Parent=Thaps264862;rank=3 chr22 . exon 874460 874832 . + . ID=Thaps264862.3;Parent=Thaps264862;constitutive=1;ensembl_end_phase=1;rank=3 chr22 ensembl protein_coding_gene 876157 877066 . + . ID=Thaps264863;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX4];external_name=Thaps264863;logic_name=jgi_thaps3 chr22 ensembl transcript 876157 877066 . + . ID=Thaps264863;Parent=Thaps264863;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 876157 876303 . + 0 ID=Thaps264863;Parent=Thaps264863;rank=1 chr22 . exon 876157 876303 . + . ID=Thaps264863.1;Parent=Thaps264863;constitutive=1;rank=1 chr22 . CDS 876473 876492 . + 0 ID=Thaps264863;Parent=Thaps264863;rank=2 chr22 . exon 876473 876492 . + . ID=Thaps264863.2;Parent=Thaps264863;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 876666 877066 . + 0 ID=Thaps264863;Parent=Thaps264863;rank=3 chr22 . exon 876666 877066 . + . ID=Thaps264863.3;Parent=Thaps264863;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 872576 873247 . + . ID=Thaps38652;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX2];external_name=Thaps38652;logic_name=jgi_thaps3 chr22 ensembl transcript 872576 873247 . + . ID=Thaps38652;Parent=Thaps38652;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 872576 873247 . + 0 ID=Thaps38652;Parent=Thaps38652;rank=1 chr22 . exon 872576 873247 . + . ID=Thaps38652.1;Parent=Thaps38652;constitutive=1;rank=1 chr22 . repeat_region 882736 883947 . + . description=Harbinger2N_TP chr22 . repeat_region 883234 883345 . ? . description=trf chr22 . repeat_region 883314 883455 . ? . description=trf chr22 . repeat_region 883646 883692 . ? . description=trf chr22 ensembl protein_coding_gene 884426 888118 . - . ID=Thaps11915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX7];external_name=Thaps11915;logic_name=jgi_thaps3 chr22 ensembl transcript 884426 888118 . - . ID=Thaps11915;Parent=Thaps11915;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 884426 885443 . - 0 ID=Thaps11915;Parent=Thaps11915;rank=7 chr22 . exon 884426 885443 . - . ID=Thaps11915.7;Parent=Thaps11915;constitutive=1;ensembl_end_phase=1;rank=7 chr22 . CDS 885615 885963 . - 0 ID=Thaps11915;Parent=Thaps11915;rank=6 chr22 . exon 885615 885963 . - . ID=Thaps11915.6;Parent=Thaps11915;constitutive=1;ensembl_end_phase=1;rank=6 chr22 . CDS 886306 886369 . - 0 ID=Thaps11915;Parent=Thaps11915;rank=5 chr22 . exon 886306 886369 . - . ID=Thaps11915.5;Parent=Thaps11915;constitutive=1;ensembl_end_phase=1;rank=5 chr22 . CDS 886694 887503 . - 0 ID=Thaps11915;Parent=Thaps11915;rank=4 chr22 . exon 886694 887503 . - . ID=Thaps11915.4;Parent=Thaps11915;constitutive=1;rank=4 chr22 . CDS 887604 887687 . - 0 ID=Thaps11915;Parent=Thaps11915;rank=3 chr22 . exon 887604 887687 . - . ID=Thaps11915.3;Parent=Thaps11915;constitutive=1;rank=3 chr22 . CDS 887776 887902 . - 0 ID=Thaps11915;Parent=Thaps11915;rank=2 chr22 . exon 887776 887902 . - . ID=Thaps11915.2;Parent=Thaps11915;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 887964 888118 . - 0 ID=Thaps11915;Parent=Thaps11915;rank=1 chr22 . exon 887964 888118 . - . ID=Thaps11915.1;Parent=Thaps11915;constitutive=1;ensembl_end_phase=2;rank=1 chr22 ensembl protein_coding_gene 878845 882681 . - . ID=Thaps25783;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX6];external_name=Thaps25783;logic_name=jgi_thaps3 chr22 ensembl transcript 878845 882681 . - . ID=Thaps25783;Parent=Thaps25783;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 878845 882681 . - 0 ID=Thaps25783;Parent=Thaps25783;rank=1 chr22 . exon 878845 882681 . - . ID=Thaps25783.1;Parent=Thaps25783;constitutive=1;rank=1 chr22 . repeat_region 889295 889303 . ? . description=dust chr22 ensembl protein_coding_gene 891957 893692 . + . ID=Thaps11918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFY0];external_name=Thaps11918;logic_name=jgi_thaps3 chr22 ensembl transcript 891957 893692 . + . ID=Thaps11918;Parent=Thaps11918;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 891957 892380 . + 0 ID=Thaps11918;Parent=Thaps11918;rank=1 chr22 . exon 891957 892380 . + . ID=Thaps11918.1;Parent=Thaps11918;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 892687 893216 . + 0 ID=Thaps11918;Parent=Thaps11918;rank=2 chr22 . exon 892687 893216 . + . ID=Thaps11918.2;Parent=Thaps11918;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 893297 893692 . + 0 ID=Thaps11918;Parent=Thaps11918;rank=3 chr22 . exon 893297 893692 . + . ID=Thaps11918.3;Parent=Thaps11918;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 890274 890725 . + . ID=Thaps264865;biotype=protein_coding;description=Cold-shock DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX9];external_name=Thaps264865;logic_name=jgi_thaps3 chr22 ensembl transcript 890274 890725 . + . ID=Thaps264865;Parent=Thaps264865;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 890274 890417 . + 0 ID=Thaps264865;Parent=Thaps264865;rank=1 chr22 . exon 890274 890417 . + . ID=Thaps264865.1;Parent=Thaps264865;constitutive=1;rank=1 chr22 . CDS 890565 890725 . + 0 ID=Thaps264865;Parent=Thaps264865;rank=2 chr22 . exon 890565 890725 . + . ID=Thaps264865.2;Parent=Thaps264865;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 895117 896161 . + . ID=Thaps264866;biotype=protein_coding;description=Calcium-dependent protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8CFY1];external_name=Thaps264866;logic_name=jgi_thaps3 chr22 ensembl transcript 895117 896161 . + . ID=Thaps264866;Parent=Thaps264866;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 895117 895220 . + 0 ID=Thaps264866;Parent=Thaps264866;rank=1 chr22 . exon 895117 895220 . + . ID=Thaps264866.1;Parent=Thaps264866;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 895324 895648 . + 0 ID=Thaps264866;Parent=Thaps264866;rank=2 chr22 . exon 895324 895648 . + . ID=Thaps264866.2;Parent=Thaps264866;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 895733 896053 . + 0 ID=Thaps264866;Parent=Thaps264866;rank=3 chr22 . exon 895733 896053 . + . ID=Thaps264866.3;Parent=Thaps264866;constitutive=1;rank=3 chr22 . CDS 896139 896161 . + 0 ID=Thaps264866;Parent=Thaps264866;rank=4 chr22 . exon 896139 896161 . + . ID=Thaps264866.4;Parent=Thaps264866;constitutive=1;ensembl_end_phase=2;rank=4 chr22 ensembl protein_coding_gene 897259 897812 . + . ID=Thaps270113;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFY2];external_name=Thaps270113;logic_name=jgi_thaps3 chr22 ensembl transcript 897259 897812 . + . ID=Thaps270113;Parent=Thaps270113;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 897259 897374 . + 0 ID=Thaps270113;Parent=Thaps270113;rank=1 chr22 . exon 897259 897374 . + . ID=Thaps270113.1;Parent=Thaps270113;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 897449 897812 . + 0 ID=Thaps270113;Parent=Thaps270113;rank=2 chr22 . exon 897449 897812 . + . ID=Thaps270113.2;Parent=Thaps270113;constitutive=1;ensembl_end_phase=1;rank=2 chr22 ensembl protein_coding_gene 888583 889235 . + . ID=Thaps38672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFX8];external_name=Thaps38672;logic_name=jgi_thaps3 chr22 ensembl transcript 888583 889235 . + . ID=Thaps38672;Parent=Thaps38672;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 888583 888735 . + 0 ID=Thaps38672;Parent=Thaps38672;rank=1 chr22 . exon 888583 888735 . + . ID=Thaps38672.1;Parent=Thaps38672;constitutive=1;rank=1 chr22 . CDS 888873 889235 . + 0 ID=Thaps38672;Parent=Thaps38672;rank=2 chr22 . exon 888873 889235 . + . ID=Thaps38672.2;Parent=Thaps38672;constitutive=1;rank=2 chr22 . repeat_region 899561 899589 . ? . description=trf chr22 . repeat_region 899632 899658 . ? . description=trf chr22 ensembl protein_coding_gene 901798 903159 . + . ID=Thaps11921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFY4];external_name=Thaps11921;logic_name=jgi_thaps3 chr22 ensembl transcript 901798 903159 . + . ID=Thaps11921;Parent=Thaps11921;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 901798 903159 . + 0 ID=Thaps11921;Parent=Thaps11921;rank=1 chr22 . exon 901798 903159 . + . ID=Thaps11921.1;Parent=Thaps11921;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 899435 901234 . + . ID=Thaps25786;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFY3];external_name=Thaps25786;logic_name=jgi_thaps3 chr22 ensembl transcript 899435 901234 . + . ID=Thaps25786;Parent=Thaps25786;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 899435 901234 . + 0 ID=Thaps25786;Parent=Thaps25786;rank=1 chr22 . exon 899435 901234 . + . ID=Thaps25786.1;Parent=Thaps25786;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 903326 904200 . + . ID=Thaps264868;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8CFY5];external_name=Thaps264868;logic_name=jgi_thaps3 chr22 ensembl transcript 903326 904200 . + . ID=Thaps264868;Parent=Thaps264868;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 903326 903364 . + 0 ID=Thaps264868;Parent=Thaps264868;rank=1 chr22 . exon 903326 903364 . + . ID=Thaps264868.1;Parent=Thaps264868;constitutive=1;rank=1 chr22 . CDS 903468 903603 . + 0 ID=Thaps264868;Parent=Thaps264868;rank=2 chr22 . exon 903468 903603 . + . ID=Thaps264868.2;Parent=Thaps264868;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 903704 904200 . + 0 ID=Thaps264868;Parent=Thaps264868;rank=3 chr22 . exon 903704 904200 . + . ID=Thaps264868.3;Parent=Thaps264868;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 904513 905249 . + . ID=Thaps264869;biotype=protein_coding;description=Rna-helicase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFY6];external_name=Thaps264869;logic_name=jgi_thaps3 chr22 ensembl transcript 904513 905249 . + . ID=Thaps264869;Parent=Thaps264869;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 904513 904596 . + 0 ID=Thaps264869;Parent=Thaps264869;rank=1 chr22 . exon 904513 904596 . + . ID=Thaps264869.1;Parent=Thaps264869;constitutive=1;rank=1 chr22 . CDS 904710 904875 . + 0 ID=Thaps264869;Parent=Thaps264869;rank=2 chr22 . exon 904710 904875 . + . ID=Thaps264869.2;Parent=Thaps264869;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 904909 905249 . + 0 ID=Thaps264869;Parent=Thaps264869;rank=3 chr22 . exon 904909 905249 . + . ID=Thaps264869.3;Parent=Thaps264869;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 915639 918323 . + . ID=Thaps11924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFY8];external_name=Thaps11924;logic_name=jgi_thaps3 chr22 ensembl transcript 915639 918323 . + . ID=Thaps11924;Parent=Thaps11924;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 915639 918323 . + 0 ID=Thaps11924;Parent=Thaps11924;rank=1 chr22 . exon 915639 918323 . + . ID=Thaps11924.1;Parent=Thaps11924;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 911555 912422 . - . ID=Thaps38608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFY7];external_name=Thaps38608;logic_name=jgi_thaps3 chr22 ensembl transcript 911555 912422 . - . ID=Thaps38608;Parent=Thaps38608;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 911555 912078 . - 0 ID=Thaps38608;Parent=Thaps38608;rank=2 chr22 . exon 911555 912078 . - . ID=Thaps38608.2;Parent=Thaps38608;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 912251 912422 . - 0 ID=Thaps38608;Parent=Thaps38608;rank=1 chr22 . exon 912251 912422 . - . ID=Thaps38608.1;Parent=Thaps38608;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . repeat_region 922489 922512 . ? . description=trf chr22 . repeat_region 922489 922549 . ? . description=dust chr22 . repeat_region 924151 924228 . ? . description=trf chr22 ensembl protein_coding_gene 922512 923791 . + . ID=Thaps11926;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ0];external_name=Thaps11926;logic_name=jgi_thaps3 chr22 ensembl transcript 922512 923791 . + . ID=Thaps11926;Parent=Thaps11926;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 922512 923250 . + 0 ID=Thaps11926;Parent=Thaps11926;rank=1 chr22 . exon 922512 923250 . + . ID=Thaps11926.1;Parent=Thaps11926;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 923340 923791 . + 0 ID=Thaps11926;Parent=Thaps11926;rank=2 chr22 . exon 923340 923791 . + . ID=Thaps11926.2;Parent=Thaps11926;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 924156 926114 . + . ID=Thaps11927;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ1];external_name=Thaps11927;logic_name=jgi_thaps3 chr22 ensembl transcript 924156 926114 . + . ID=Thaps11927;Parent=Thaps11927;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 924156 925347 . + 0 ID=Thaps11927;Parent=Thaps11927;rank=1 chr22 . exon 924156 925347 . + . ID=Thaps11927.1;Parent=Thaps11927;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 925447 926114 . + 0 ID=Thaps11927;Parent=Thaps11927;rank=2 chr22 . exon 925447 926114 . + . ID=Thaps11927.2;Parent=Thaps11927;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 920488 921537 . - . ID=Thaps25788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFY9];external_name=Thaps25788;logic_name=jgi_thaps3 chr22 ensembl transcript 920488 921537 . - . ID=Thaps25788;Parent=Thaps25788;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 920488 921537 . - 0 ID=Thaps25788;Parent=Thaps25788;rank=1 chr22 . exon 920488 921537 . - . ID=Thaps25788.1;Parent=Thaps25788;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 926292 927847 . - . ID=Thaps25789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ2];external_name=Thaps25789;logic_name=jgi_thaps3 chr22 ensembl transcript 926292 927847 . - . ID=Thaps25789;Parent=Thaps25789;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 926292 926509 . - 0 ID=Thaps25789;Parent=Thaps25789;rank=2 chr22 . exon 926292 926509 . - . ID=Thaps25789.2;Parent=Thaps25789;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 926587 927847 . - 0 ID=Thaps25789;Parent=Thaps25789;rank=1 chr22 . exon 926587 927847 . - . ID=Thaps25789.1;Parent=Thaps25789;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . repeat_region 937722 937771 . + . description=TE2a_TP chr22 ensembl protein_coding_gene 930138 933102 . + . ID=Thaps11929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ3];external_name=Thaps11929;logic_name=jgi_thaps3 chr22 ensembl transcript 930138 933102 . + . ID=Thaps11929;Parent=Thaps11929;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 930138 932191 . + 0 ID=Thaps11929;Parent=Thaps11929;rank=1 chr22 . exon 930138 932191 . + . ID=Thaps11929.1;Parent=Thaps11929;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 932295 933102 . + 0 ID=Thaps11929;Parent=Thaps11929;rank=2 chr22 . exon 932295 933102 . + . ID=Thaps11929.2;Parent=Thaps11929;constitutive=1;ensembl_end_phase=1;rank=2 chr22 ensembl protein_coding_gene 933807 935138 . - . ID=Thaps14317;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ4];external_name=Thaps14317;logic_name=jgi_thaps3 chr22 ensembl transcript 933807 935138 . - . ID=Thaps14317;Parent=Thaps14317;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 933807 935138 . - 0 ID=Thaps14317;Parent=Thaps14317;rank=1 chr22 . exon 933807 935138 . - . ID=Thaps14317.1;Parent=Thaps14317;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 936415 937308 . - . ID=Thaps25790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ5];external_name=Thaps25790;logic_name=jgi_thaps3 chr22 ensembl transcript 936415 937308 . - . ID=Thaps25790;Parent=Thaps25790;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 936415 936544 . - 0 ID=Thaps25790;Parent=Thaps25790;rank=2 chr22 . exon 936415 936544 . - . ID=Thaps25790.2;Parent=Thaps25790;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 936656 937308 . - 0 ID=Thaps25790;Parent=Thaps25790;rank=1 chr22 . exon 936656 937308 . - . ID=Thaps25790.1;Parent=Thaps25790;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . repeat_region 938172 938221 . ? . description=dust chr22 . repeat_region 938177 938221 . ? . description=trf chr22 . repeat_region 938536 938582 . ? . description=dust chr22 . repeat_region 945217 945224 . ? . description=dust chr22 . repeat_region 945355 945392 . ? . description=trf chr22 ensembl protein_coding_gene 938231 939655 . + . ID=Thaps11932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ6];external_name=Thaps11932;logic_name=jgi_thaps3 chr22 ensembl transcript 938231 939655 . + . ID=Thaps11932;Parent=Thaps11932;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 938231 939655 . + 0 ID=Thaps11932;Parent=Thaps11932;rank=1 chr22 . exon 938231 939655 . + . ID=Thaps11932.1;Parent=Thaps11932;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 941006 942579 . + . ID=Thaps11933;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ7];external_name=Thaps11933;logic_name=jgi_thaps3 chr22 ensembl transcript 941006 942579 . + . ID=Thaps11933;Parent=Thaps11933;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 941006 941945 . + 0 ID=Thaps11933;Parent=Thaps11933;rank=1 chr22 . exon 941006 941945 . + . ID=Thaps11933.1;Parent=Thaps11933;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 942023 942579 . + 0 ID=Thaps11933;Parent=Thaps11933;rank=2 chr22 . exon 942023 942579 . + . ID=Thaps11933.2;Parent=Thaps11933;constitutive=1;ensembl_end_phase=2;rank=2 chr22 ensembl protein_coding_gene 943109 944980 . + . ID=Thaps11934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ8];external_name=Thaps11934;logic_name=jgi_thaps3 chr22 ensembl transcript 943109 944980 . + . ID=Thaps11934;Parent=Thaps11934;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 943109 944980 . + 0 ID=Thaps11934;Parent=Thaps11934;rank=1 chr22 . exon 943109 944980 . + . ID=Thaps11934.1;Parent=Thaps11934;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 945303 946825 . + . ID=Thaps26051;biotype=protein_coding;description=Glutamine synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CFZ9];external_name=GLNA;logic_name=jgi_thaps3 chr22 ensembl transcript 945303 946825 . + . ID=Thaps26051;Parent=Thaps26051;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 945303 945774 . + 0 ID=Thaps26051;Parent=Thaps26051;rank=1 chr22 . exon 945303 945774 . + . ID=Thaps26051.1;Parent=Thaps26051;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 945928 946655 . + 0 ID=Thaps26051;Parent=Thaps26051;rank=2 chr22 . exon 945928 946655 . + . ID=Thaps26051.2;Parent=Thaps26051;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 946775 946825 . + 0 ID=Thaps26051;Parent=Thaps26051;rank=3 chr22 . exon 946775 946825 . + . ID=Thaps26051.3;Parent=Thaps26051;constitutive=1;rank=3 chr22 ensembl protein_coding_gene 951768 952682 . - . ID=Thaps11938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG01];external_name=Thaps11938;logic_name=jgi_thaps3 chr22 ensembl transcript 951768 952682 . - . ID=Thaps11938;Parent=Thaps11938;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 951768 952495 . - 0 ID=Thaps11938;Parent=Thaps11938;rank=2 chr22 . exon 951768 952495 . - . ID=Thaps11938.2;Parent=Thaps11938;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 952538 952682 . - 0 ID=Thaps11938;Parent=Thaps11938;rank=1 chr22 . exon 952538 952682 . - . ID=Thaps11938.1;Parent=Thaps11938;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 954318 954965 . + . ID=Thaps11939;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG02];external_name=Thaps11939;logic_name=jgi_thaps3 chr22 ensembl transcript 954318 954965 . + . ID=Thaps11939;Parent=Thaps11939;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 954318 954965 . + 0 ID=Thaps11939;Parent=Thaps11939;rank=1 chr22 . exon 954318 954965 . + . ID=Thaps11939.1;Parent=Thaps11939;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 948681 950417 . + . ID=Thaps25793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG00];external_name=Thaps25793;logic_name=jgi_thaps3 chr22 ensembl transcript 948681 950417 . + . ID=Thaps25793;Parent=Thaps25793;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 948681 950417 . + 0 ID=Thaps25793;Parent=Thaps25793;rank=1 chr22 . exon 948681 950417 . + . ID=Thaps25793.1;Parent=Thaps25793;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 955806 957046 . - . ID=Thaps25794;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG03];external_name=Thaps25794;logic_name=jgi_thaps3 chr22 ensembl transcript 955806 957046 . - . ID=Thaps25794;Parent=Thaps25794;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 955806 955865 . - 0 ID=Thaps25794;Parent=Thaps25794;rank=3 chr22 . exon 955806 955865 . - . ID=Thaps25794.3;Parent=Thaps25794;constitutive=1;rank=3 chr22 . CDS 955990 956586 . - 0 ID=Thaps25794;Parent=Thaps25794;rank=2 chr22 . exon 955990 956586 . - . ID=Thaps25794.2;Parent=Thaps25794;constitutive=1;rank=2 chr22 . CDS 956954 957046 . - 0 ID=Thaps25794;Parent=Thaps25794;rank=1 chr22 . exon 956954 957046 . - . ID=Thaps25794.1;Parent=Thaps25794;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 957958 961716 . + . ID=Thaps11941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG04];external_name=Thaps11941;logic_name=jgi_thaps3 chr22 ensembl transcript 957958 961716 . + . ID=Thaps11941;Parent=Thaps11941;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 957958 958927 . + 0 ID=Thaps11941;Parent=Thaps11941;rank=1 chr22 . exon 957958 958927 . + . ID=Thaps11941.1;Parent=Thaps11941;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 959003 960101 . + 0 ID=Thaps11941;Parent=Thaps11941;rank=2 chr22 . exon 959003 960101 . + . ID=Thaps11941.2;Parent=Thaps11941;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 960269 960436 . + 0 ID=Thaps11941;Parent=Thaps11941;rank=3 chr22 . exon 960269 960436 . + . ID=Thaps11941.3;Parent=Thaps11941;constitutive=1;rank=3 chr22 . CDS 960603 961410 . + 0 ID=Thaps11941;Parent=Thaps11941;rank=4 chr22 . exon 960603 961410 . + . ID=Thaps11941.4;Parent=Thaps11941;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 961480 961716 . + 0 ID=Thaps11941;Parent=Thaps11941;rank=5 chr22 . exon 961480 961716 . + . ID=Thaps11941.5;Parent=Thaps11941;constitutive=1;rank=5 chr22 ensembl protein_coding_gene 962059 972084 . - . ID=Thaps25795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG05];external_name=Thaps25795;logic_name=jgi_thaps3 chr22 ensembl transcript 962059 972084 . - . ID=Thaps25795;Parent=Thaps25795;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 962059 962160 . - 0 ID=Thaps25795;Parent=Thaps25795;rank=5 chr22 . exon 962059 962160 . - . ID=Thaps25795.5;Parent=Thaps25795;constitutive=1;rank=5 chr22 . CDS 962246 962578 . - 0 ID=Thaps25795;Parent=Thaps25795;rank=4 chr22 . exon 962246 962578 . - . ID=Thaps25795.4;Parent=Thaps25795;constitutive=1;rank=4 chr22 . CDS 962662 968361 . - 0 ID=Thaps25795;Parent=Thaps25795;rank=3 chr22 . exon 962662 968361 . - . ID=Thaps25795.3;Parent=Thaps25795;constitutive=1;rank=3 chr22 . CDS 968385 970688 . - 0 ID=Thaps25795;Parent=Thaps25795;rank=2 chr22 . CDS 971008 972084 . - 0 ID=Thaps25795;Parent=Thaps25795;rank=1 chr22 . repeat_region 970234 970284 . ? . description=dust chr22 . repeat_region 970236 970271 . ? . description=trf chr22 . repeat_region 970265 970284 . ? . description=trf chr22 . repeat_region 971641 971703 . ? . description=dust chr22 . repeat_region 974285 974292 . ? . description=dust chr22 . repeat_region 974449 974489 . ? . description=dust chr22 . biological_region 974573 974578 0.999 + . logic_name=eponine chr22 . repeat_region 976350 976359 . ? . description=dust chr22 ensembl protein_coding_gene 972908 974029 . + . ID=Thaps11943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG06];external_name=Thaps11943;logic_name=jgi_thaps3 chr22 ensembl transcript 972908 974029 . + . ID=Thaps11943;Parent=Thaps11943;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 972908 974029 . + 0 ID=Thaps11943;Parent=Thaps11943;rank=1 chr22 . exon 972908 974029 . + . ID=Thaps11943.1;Parent=Thaps11943;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 977319 978026 . - . ID=Thaps11945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG08];external_name=Thaps11945;logic_name=jgi_thaps3 chr22 ensembl transcript 977319 978026 . - . ID=Thaps11945;Parent=Thaps11945;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 977319 978026 . - 0 ID=Thaps11945;Parent=Thaps11945;rank=1 chr22 . exon 977319 978026 . - . ID=Thaps11945.1;Parent=Thaps11945;constitutive=1;rank=1 chr22 . exon 968385 970688 . - . ID=Thaps25795.2;Parent=Thaps25795;constitutive=1;rank=2 chr22 . exon 971008 972084 . - . ID=Thaps25795.1;Parent=Thaps25795;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 974548 976599 . + . ID=Thaps25796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG07];external_name=Thaps25796;logic_name=jgi_thaps3 chr22 ensembl transcript 974548 976599 . + . ID=Thaps25796;Parent=Thaps25796;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 974548 974683 . + 0 ID=Thaps25796;Parent=Thaps25796;rank=1 chr22 . exon 974548 974683 . + . ID=Thaps25796.1;Parent=Thaps25796;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 975034 976284 . + 0 ID=Thaps25796;Parent=Thaps25796;rank=2 chr22 . exon 975034 976284 . + . ID=Thaps25796.2;Parent=Thaps25796;constitutive=1;rank=2 chr22 . CDS 976520 976599 . + 0 ID=Thaps25796;Parent=Thaps25796;rank=3 chr22 . exon 976520 976599 . + . ID=Thaps25796.3;Parent=Thaps25796;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 982666 984753 . + . ID=Thaps11947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG10];external_name=Thaps11947;logic_name=jgi_thaps3 chr22 ensembl transcript 982666 984753 . + . ID=Thaps11947;Parent=Thaps11947;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 982666 982783 . + 0 ID=Thaps11947;Parent=Thaps11947;rank=1 chr22 . exon 982666 982783 . + . ID=Thaps11947.1;Parent=Thaps11947;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 982829 983932 . + 0 ID=Thaps11947;Parent=Thaps11947;rank=2 chr22 . exon 982829 983932 . + . ID=Thaps11947.2;Parent=Thaps11947;constitutive=1;rank=2 chr22 . CDS 984248 984753 . + 0 ID=Thaps11947;Parent=Thaps11947;rank=3 chr22 . exon 984248 984753 . + . ID=Thaps11947.3;Parent=Thaps11947;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 986798 990683 . - . ID=Thaps11949;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG12];external_name=Thaps11949;logic_name=jgi_thaps3 chr22 ensembl transcript 986798 990683 . - . ID=Thaps11949;Parent=Thaps11949;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 986798 988301 . - 0 ID=Thaps11949;Parent=Thaps11949;rank=4 chr22 . exon 986798 988301 . - . ID=Thaps11949.4;Parent=Thaps11949;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 988621 989441 . - 0 ID=Thaps11949;Parent=Thaps11949;rank=3 chr22 . CDS 989514 989674 . - 0 ID=Thaps11949;Parent=Thaps11949;rank=2 chr22 . CDS 989774 990683 . - 0 ID=Thaps11949;Parent=Thaps11949;rank=1 chr22 ensembl protein_coding_gene 986172 986651 . + . ID=Thaps18846;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG11];external_name=Thaps18846;logic_name=jgi_thaps3 chr22 ensembl transcript 986172 986651 . + . ID=Thaps18846;Parent=Thaps18846;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 986172 986651 . + 0 ID=Thaps18846;Parent=Thaps18846;rank=1 chr22 . exon 986172 986651 . + . ID=Thaps18846.1;Parent=Thaps18846;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 978648 981843 . - . ID=Thaps25797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG09];external_name=Thaps25797;logic_name=jgi_thaps3 chr22 ensembl transcript 978648 981843 . - . ID=Thaps25797;Parent=Thaps25797;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 978648 979165 . - 0 ID=Thaps25797;Parent=Thaps25797;rank=3 chr22 . exon 978648 979165 . - . ID=Thaps25797.3;Parent=Thaps25797;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 979252 980096 . - 0 ID=Thaps25797;Parent=Thaps25797;rank=2 chr22 . exon 979252 980096 . - . ID=Thaps25797.2;Parent=Thaps25797;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 980201 981843 . - 0 ID=Thaps25797;Parent=Thaps25797;rank=1 chr22 . exon 980201 981843 . - . ID=Thaps25797.1;Parent=Thaps25797;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . repeat_region 989808 989860 . ? . description=trf chr22 . repeat_region 990199 990256 . ? . description=dust chr22 . repeat_region 991151 991158 . ? . description=dust chr22 . repeat_region 994908 994942 . ? . description=trf chr22 . repeat_region 995362 995395 . ? . description=dust chr22 . exon 988621 989441 . - . ID=Thaps11949.3;Parent=Thaps11949;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . exon 989514 989674 . - . ID=Thaps11949.2;Parent=Thaps11949;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . exon 989774 990683 . - . ID=Thaps11949.1;Parent=Thaps11949;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 993592 994566 . - . ID=Thaps11951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG14];external_name=Thaps11951;logic_name=jgi_thaps3 chr22 ensembl transcript 993592 994566 . - . ID=Thaps11951;Parent=Thaps11951;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 993592 994566 . - 0 ID=Thaps11951;Parent=Thaps11951;rank=1 chr22 . exon 993592 994566 . - . ID=Thaps11951.1;Parent=Thaps11951;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 996177 998907 . - . ID=Thaps11953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG16];external_name=Thaps11953;logic_name=jgi_thaps3 chr22 ensembl transcript 996177 998907 . - . ID=Thaps11953;Parent=Thaps11953;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 996177 996289 . - 0 ID=Thaps11953;Parent=Thaps11953;rank=9 chr22 . exon 996177 996289 . - . ID=Thaps11953.9;Parent=Thaps11953;constitutive=1;ensembl_end_phase=2;rank=9 chr22 . CDS 996377 996447 . - 0 ID=Thaps11953;Parent=Thaps11953;rank=8 chr22 . exon 996377 996447 . - . ID=Thaps11953.8;Parent=Thaps11953;constitutive=1;ensembl_end_phase=2;rank=8 chr22 . CDS 996537 996681 . - 0 ID=Thaps11953;Parent=Thaps11953;rank=7 chr22 . exon 996537 996681 . - . ID=Thaps11953.7;Parent=Thaps11953;constitutive=1;ensembl_end_phase=1;rank=7 chr22 . CDS 996732 996768 . - 0 ID=Thaps11953;Parent=Thaps11953;rank=6 chr22 . exon 996732 996768 . - . ID=Thaps11953.6;Parent=Thaps11953;constitutive=1;ensembl_end_phase=1;rank=6 chr22 . CDS 996806 996974 . - 0 ID=Thaps11953;Parent=Thaps11953;rank=5 chr22 . exon 996806 996974 . - . ID=Thaps11953.5;Parent=Thaps11953;constitutive=1;ensembl_end_phase=1;rank=5 chr22 . CDS 997070 997156 . - 0 ID=Thaps11953;Parent=Thaps11953;rank=4 chr22 . exon 997070 997156 . - . ID=Thaps11953.4;Parent=Thaps11953;constitutive=1;rank=4 chr22 . CDS 997261 998293 . - 0 ID=Thaps11953;Parent=Thaps11953;rank=3 chr22 . exon 997261 998293 . - . ID=Thaps11953.3;Parent=Thaps11953;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 998386 998496 . - 0 ID=Thaps11953;Parent=Thaps11953;rank=2 chr22 . CDS 998583 998907 . - 0 ID=Thaps11953;Parent=Thaps11953;rank=1 chr22 ensembl protein_coding_gene 991411 993367 . + . ID=Thaps25799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG13];external_name=Thaps25799;logic_name=jgi_thaps3 chr22 ensembl transcript 991411 993367 . + . ID=Thaps25799;Parent=Thaps25799;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 991411 991762 . + 0 ID=Thaps25799;Parent=Thaps25799;rank=1 chr22 . exon 991411 991762 . + . ID=Thaps25799.1;Parent=Thaps25799;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 991836 992710 . + 0 ID=Thaps25799;Parent=Thaps25799;rank=2 chr22 . exon 991836 992710 . + . ID=Thaps25799.2;Parent=Thaps25799;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . CDS 992803 993210 . + 0 ID=Thaps25799;Parent=Thaps25799;rank=3 chr22 . exon 992803 993210 . + . ID=Thaps25799.3;Parent=Thaps25799;constitutive=1;rank=3 chr22 . CDS 993278 993367 . + 0 ID=Thaps25799;Parent=Thaps25799;rank=4 chr22 . exon 993278 993367 . + . ID=Thaps25799.4;Parent=Thaps25799;constitutive=1;rank=4 chr22 ensembl protein_coding_gene 995131 995523 . + . ID=Thaps25800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG15];external_name=Thaps25800;logic_name=jgi_thaps3 chr22 ensembl transcript 995131 995523 . + . ID=Thaps25800;Parent=Thaps25800;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 995131 995523 . + 0 ID=Thaps25800;Parent=Thaps25800;rank=1 chr22 . exon 995131 995523 . + . ID=Thaps25800.1;Parent=Thaps25800;constitutive=1;rank=1 chr22 ensembl tRNA_gene 1003258 1003350 . + . ID=EPrTPOG00000000008;biotype=tRNA;description=tRNA-Ala for anticodon CGC [Source:TRNASCAN_SE%3BAcc:tRNA-Ala];external_name=tRNA-Ala;logic_name=ncrna_eg chr22 ensembl transcript 1003258 1003350 . + . ID=EPrTPOT00000000016;Parent=EPrTPOG00000000008;biotype=tRNA;logic_name=ncrna_eg chr22 ensembl tRNA_gene 1003176 1003247 . + . ID=EPrTPOG00000000033;biotype=tRNA;description=tRNA-Met for anticodon CAU [Source:TRNASCAN_SE%3BAcc:tRNA-Met];external_name=tRNA-Met;logic_name=ncrna_eg chr22 ensembl transcript 1003176 1003247 . + . ID=EPrTPOT00000000019;Parent=EPrTPOG00000000033;biotype=tRNA;logic_name=ncrna_eg chr22 . exon 1003258 1003350 . + . ID=EPrTPOE00000000008;Parent=EPrTPOT00000000016;constitutive=1;rank=1 chr22 . exon 1003176 1003247 . + . ID=EPrTPOE00000000033;Parent=EPrTPOT00000000019;constitutive=1;rank=1 chr22 . exon 998386 998496 . - . ID=Thaps11953.2;Parent=Thaps11953;constitutive=1;rank=2 chr22 . exon 998583 998907 . - . ID=Thaps11953.1;Parent=Thaps11953;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 1001049 1002832 . - . ID=Thaps25801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG18];external_name=Thaps25801;logic_name=jgi_thaps3 chr22 ensembl transcript 1001049 1002832 . - . ID=Thaps25801;Parent=Thaps25801;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1001049 1001395 . - 0 ID=Thaps25801;Parent=Thaps25801;rank=3 chr22 . exon 1001049 1001395 . - . ID=Thaps25801.3;Parent=Thaps25801;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 1001523 1001996 . - 0 ID=Thaps25801;Parent=Thaps25801;rank=2 chr22 . exon 1001523 1001996 . - . ID=Thaps25801.2;Parent=Thaps25801;constitutive=1;rank=2 chr22 . CDS 1002085 1002832 . - 0 ID=Thaps25801;Parent=Thaps25801;rank=1 chr22 . exon 1002085 1002832 . - . ID=Thaps25801.1;Parent=Thaps25801;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 1004110 1006092 . - . ID=Thaps25802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG19];external_name=Thaps25802;logic_name=jgi_thaps3 chr22 ensembl transcript 1004110 1006092 . - . ID=Thaps25802;Parent=Thaps25802;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1004110 1006092 . - 0 ID=Thaps25802;Parent=Thaps25802;rank=1 chr22 . exon 1004110 1006092 . - . ID=Thaps25802.1;Parent=Thaps25802;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 998852 1000616 . + . ID=Thaps264879;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG17];external_name=Thaps264879;logic_name=jgi_thaps3 chr22 ensembl transcript 998852 1000616 . + . ID=Thaps264879;Parent=Thaps264879;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 998852 998927 . + 0 ID=Thaps264879;Parent=Thaps264879;rank=1 chr22 . exon 998852 998927 . + . ID=Thaps264879.1;Parent=Thaps264879;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 999423 1000616 . + 0 ID=Thaps264879;Parent=Thaps264879;rank=2 chr22 . exon 999423 1000616 . + . ID=Thaps264879.2;Parent=Thaps264879;constitutive=1;rank=2 chr22 . repeat_region 1011338 1011367 . ? . description=dust chr22 . repeat_region 1012089 1012143 . ? . description=dust chr22 . repeat_region 1017044 1017076 . ? . description=dust chr22 . repeat_region 1017048 1017076 . ? . description=trf chr22 ensembl protein_coding_gene 1010727 1013021 . + . ID=Thaps11958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG21];external_name=Thaps11958;logic_name=jgi_thaps3 chr22 ensembl transcript 1010727 1013021 . + . ID=Thaps11958;Parent=Thaps11958;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1010727 1010870 . + 0 ID=Thaps11958;Parent=Thaps11958;rank=1 chr22 . exon 1010727 1010870 . + . ID=Thaps11958.1;Parent=Thaps11958;constitutive=1;rank=1 chr22 . CDS 1011319 1011627 . + 0 ID=Thaps11958;Parent=Thaps11958;rank=2 chr22 . exon 1011319 1011627 . + . ID=Thaps11958.2;Parent=Thaps11958;constitutive=1;rank=2 chr22 . CDS 1011702 1011914 . + 0 ID=Thaps11958;Parent=Thaps11958;rank=3 chr22 . exon 1011702 1011914 . + . ID=Thaps11958.3;Parent=Thaps11958;constitutive=1;rank=3 chr22 . CDS 1012146 1012620 . + 0 ID=Thaps11958;Parent=Thaps11958;rank=4 chr22 . exon 1012146 1012620 . + . ID=Thaps11958.4;Parent=Thaps11958;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 1012732 1013021 . + 0 ID=Thaps11958;Parent=Thaps11958;rank=5 chr22 . exon 1012732 1013021 . + . ID=Thaps11958.5;Parent=Thaps11958;constitutive=1;ensembl_end_phase=2;rank=5 chr22 ensembl protein_coding_gene 1008270 1010139 . - . ID=Thaps25803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG20];external_name=Thaps25803;logic_name=jgi_thaps3 chr22 ensembl transcript 1008270 1010139 . - . ID=Thaps25803;Parent=Thaps25803;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1008270 1008628 . - 0 ID=Thaps25803;Parent=Thaps25803;rank=3 chr22 . exon 1008270 1008628 . - . ID=Thaps25803.3;Parent=Thaps25803;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . CDS 1008677 1008910 . - 0 ID=Thaps25803;Parent=Thaps25803;rank=2 chr22 . exon 1008677 1008910 . - . ID=Thaps25803.2;Parent=Thaps25803;constitutive=1;rank=2 chr22 . CDS 1009074 1010139 . - 0 ID=Thaps25803;Parent=Thaps25803;rank=1 chr22 . exon 1009074 1010139 . - . ID=Thaps25803.1;Parent=Thaps25803;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 1015210 1016843 . + . ID=Thaps270115;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG22];external_name=Thaps270115;logic_name=jgi_thaps3 chr22 ensembl transcript 1015210 1016843 . + . ID=Thaps270115;Parent=Thaps270115;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1015210 1015691 . + 0 ID=Thaps270115;Parent=Thaps270115;rank=1 chr22 . exon 1015210 1015691 . + . ID=Thaps270115.1;Parent=Thaps270115;constitutive=1;ensembl_end_phase=2;rank=1 chr22 . CDS 1015805 1016843 . + 0 ID=Thaps270115;Parent=Thaps270115;rank=2 chr22 . exon 1015805 1016843 . + . ID=Thaps270115.2;Parent=Thaps270115;constitutive=1;ensembl_end_phase=1;rank=2 chr22 ensembl protein_coding_gene 1018861 1019763 . + . ID=Thaps11960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG23];external_name=Thaps11960;logic_name=jgi_thaps3 chr22 ensembl transcript 1018861 1019763 . + . ID=Thaps11960;Parent=Thaps11960;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1018861 1019763 . + 0 ID=Thaps11960;Parent=Thaps11960;rank=1 chr22 . exon 1018861 1019763 . + . ID=Thaps11960.1;Parent=Thaps11960;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 1021939 1023961 . - . ID=Thaps11962;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG25];external_name=Thaps11962;logic_name=jgi_thaps3 chr22 ensembl transcript 1021939 1023961 . - . ID=Thaps11962;Parent=Thaps11962;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1021939 1023492 . - 0 ID=Thaps11962;Parent=Thaps11962;rank=2 chr22 . exon 1021939 1023492 . - . ID=Thaps11962.2;Parent=Thaps11962;constitutive=1;rank=2 chr22 . CDS 1023587 1023961 . - 0 ID=Thaps11962;Parent=Thaps11962;rank=1 chr22 . exon 1023587 1023961 . - . ID=Thaps11962.1;Parent=Thaps11962;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 1024768 1030124 . - . ID=Thaps11963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG26];external_name=Thaps11963;logic_name=jgi_thaps3 chr22 ensembl transcript 1024768 1030124 . - . ID=Thaps11963;Parent=Thaps11963;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1024768 1027095 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=13 chr22 . exon 1024768 1027095 . - . ID=Thaps11963.13;Parent=Thaps11963;constitutive=1;rank=13 chr22 . CDS 1027151 1027200 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=12 chr22 . exon 1027151 1027200 . - . ID=Thaps11963.12;Parent=Thaps11963;constitutive=1;ensembl_end_phase=2;rank=12 chr22 . CDS 1027275 1027494 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=11 chr22 . exon 1027275 1027494 . - . ID=Thaps11963.11;Parent=Thaps11963;constitutive=1;ensembl_end_phase=1;rank=11 chr22 . CDS 1027569 1027728 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=10 chr22 . exon 1027569 1027728 . - . ID=Thaps11963.10;Parent=Thaps11963;constitutive=1;ensembl_end_phase=1;rank=10 chr22 . CDS 1027812 1027957 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=9 chr22 . CDS 1027978 1028023 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=8 chr22 . CDS 1028207 1028472 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=7 chr22 . CDS 1028557 1028581 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=6 chr22 . CDS 1028657 1028763 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=5 chr22 . CDS 1028906 1028912 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=4 chr22 . CDS 1028983 1029074 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=3 chr22 . CDS 1029154 1029554 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=2 chr22 . CDS 1029656 1030124 . - 0 ID=Thaps11963;Parent=Thaps11963;rank=1 chr22 ensembl protein_coding_gene 1020504 1021328 . + . ID=Thaps25805;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG24];external_name=Thaps25805;logic_name=jgi_thaps3 chr22 ensembl transcript 1020504 1021328 . + . ID=Thaps25805;Parent=Thaps25805;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1020504 1020642 . + 0 ID=Thaps25805;Parent=Thaps25805;rank=1 chr22 . exon 1020504 1020642 . + . ID=Thaps25805.1;Parent=Thaps25805;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 1020775 1021328 . + 0 ID=Thaps25805;Parent=Thaps25805;rank=2 chr22 . exon 1020775 1021328 . + . ID=Thaps25805.2;Parent=Thaps25805;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . repeat_region 1033453 1033483 . ? . description=trf chr22 . repeat_region 1033453 1033483 . ? . description=dust chr22 . exon 1027812 1027957 . - . ID=Thaps11963.9;Parent=Thaps11963;constitutive=1;ensembl_end_phase=2;rank=9 chr22 . exon 1027978 1028023 . - . ID=Thaps11963.8;Parent=Thaps11963;constitutive=1;ensembl_end_phase=1;rank=8 chr22 . exon 1028207 1028472 . - . ID=Thaps11963.7;Parent=Thaps11963;constitutive=1;ensembl_end_phase=2;rank=7 chr22 . exon 1028557 1028581 . - . ID=Thaps11963.6;Parent=Thaps11963;constitutive=1;ensembl_end_phase=1;rank=6 chr22 . exon 1028657 1028763 . - . ID=Thaps11963.5;Parent=Thaps11963;constitutive=1;ensembl_end_phase=2;rank=5 chr22 . exon 1028906 1028912 . - . ID=Thaps11963.4;Parent=Thaps11963;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . exon 1028983 1029074 . - . ID=Thaps11963.3;Parent=Thaps11963;constitutive=1;ensembl_end_phase=2;rank=3 chr22 . exon 1029154 1029554 . - . ID=Thaps11963.2;Parent=Thaps11963;constitutive=1;ensembl_end_phase=2;rank=2 chr22 . exon 1029656 1030124 . - . ID=Thaps11963.1;Parent=Thaps11963;constitutive=1;ensembl_end_phase=1;rank=1 chr22 ensembl protein_coding_gene 1033773 1034903 . + . ID=Thaps11965;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG28];external_name=Thaps11965;logic_name=jgi_thaps3 chr22 ensembl transcript 1033773 1034903 . + . ID=Thaps11965;Parent=Thaps11965;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1033773 1034903 . + 0 ID=Thaps11965;Parent=Thaps11965;rank=1 chr22 . exon 1033773 1034903 . + . ID=Thaps11965.1;Parent=Thaps11965;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 1035389 1039190 . + . ID=Thaps11966;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG29];external_name=Thaps11966;logic_name=jgi_thaps3 chr22 ensembl transcript 1035389 1039190 . + . ID=Thaps11966;Parent=Thaps11966;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1035389 1036766 . + 0 ID=Thaps11966;Parent=Thaps11966;rank=1 chr22 . exon 1035389 1036766 . + . ID=Thaps11966.1;Parent=Thaps11966;constitutive=1;ensembl_end_phase=1;rank=1 chr22 . CDS 1036875 1037708 . + 0 ID=Thaps11966;Parent=Thaps11966;rank=2 chr22 . exon 1036875 1037708 . + . ID=Thaps11966.2;Parent=Thaps11966;constitutive=1;rank=2 chr22 . CDS 1037950 1039190 . + 0 ID=Thaps11966;Parent=Thaps11966;rank=3 chr22 ensembl protein_coding_gene 1030742 1032442 . + . ID=Thaps25806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG27];external_name=Thaps25806;logic_name=jgi_thaps3 chr22 ensembl transcript 1030742 1032442 . + . ID=Thaps25806;Parent=Thaps25806;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1030742 1032442 . + 0 ID=Thaps25806;Parent=Thaps25806;rank=1 chr22 . exon 1030742 1032442 . + . ID=Thaps25806.1;Parent=Thaps25806;constitutive=1;rank=1 chr22 . repeat_region 1041133 1041330 . + . description=Gypsy1ALTR_TP chr22 . repeat_region 1042384 1046013 . + . description=RTE1_TP chr22 . repeat_region 1047404 1047440 . + . description=Copia5I_TP chr22 . repeat_region 1047498 1047627 . + . description=Copia5LTR_TP chr22 . repeat_region 1047631 1047760 . + . description=Copia5LTR_TP chr22 . exon 1037950 1039190 . + . ID=Thaps11966.3;Parent=Thaps11966;constitutive=1;ensembl_end_phase=2;rank=3 chr22 ensembl protein_coding_gene 1041341 1041649 . + . ID=Thaps11968;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG31];external_name=Thaps11968;logic_name=jgi_thaps3 chr22 ensembl transcript 1041341 1041649 . + . ID=Thaps11968;Parent=Thaps11968;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1041341 1041649 . + 0 ID=Thaps11968;Parent=Thaps11968;rank=1 chr22 . exon 1041341 1041649 . + . ID=Thaps11968.1;Parent=Thaps11968;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 1039624 1040675 . - . ID=Thaps25807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG30];external_name=Thaps25807;logic_name=jgi_thaps3 chr22 ensembl transcript 1039624 1040675 . - . ID=Thaps25807;Parent=Thaps25807;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1039624 1039848 . - 0 ID=Thaps25807;Parent=Thaps25807;rank=2 chr22 . exon 1039624 1039848 . - . ID=Thaps25807.2;Parent=Thaps25807;constitutive=1;rank=2 chr22 . CDS 1039959 1040675 . - 0 ID=Thaps25807;Parent=Thaps25807;rank=1 chr22 . exon 1039959 1040675 . - . ID=Thaps25807.1;Parent=Thaps25807;constitutive=1;rank=1 chr22 ensembl gene 1044001 1045049 . + . ID=Thaps264882;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr22 ensembl transcript 1044001 1045049 . + . ID=Thaps264882;Parent=Thaps264882;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr22 . exon 1044001 1044483 . + . ID=Thaps264882.1;Parent=Thaps264882;constitutive=1;rank=1 chr22 . exon 1044502 1044718 . + . ID=Thaps264882.2;Parent=Thaps264882;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . exon 1044779 1044889 . + . ID=Thaps264882.3;Parent=Thaps264882;constitutive=1;rank=3 chr22 . exon 1044968 1045049 . + . ID=Thaps264882.4;Parent=Thaps264882;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . repeat_region 1048011 1048055 . ? . description=dust chr22 . repeat_region 1048011 1048060 . ? . description=trf chr22 . repeat_region 1050318 1050325 . ? . description=dust chr22 . biological_region 1051354 1051357 0.999 + . logic_name=eponine chr22 . repeat_region 1055421 1056111 . ? . description=trf chr22 . repeat_region 1055444 1055451 . ? . description=dust chr22 . repeat_region 1055576 1055583 . ? . description=dust chr22 . repeat_region 1055788 1055795 . ? . description=dust chr22 . repeat_region 1055920 1055927 . ? . description=dust chr22 . repeat_region 1056220 1056391 . ? . description=trf chr22 . repeat_region 1056220 1056676 . - . description=Harbinger2N_TP chr22 . repeat_region 1056274 1056387 . ? . description=dust chr22 . repeat_region 1056345 1056607 . ? . description=trf chr22 . repeat_region 1056455 1056533 . ? . description=dust chr22 . repeat_region 1056456 1056497 . ? . description=trf chr22 . repeat_region 1056583 1056663 . ? . description=dust chr22 . repeat_region 1056616 1056655 . ? . description=trf chr22 . repeat_region 1056618 1056662 . ? . description=trf chr22 . repeat_region 1056705 1057565 . ? . description=trf chr22 . repeat_region 1056705 1057565 . ? . description=dust chr22 ensembl protein_coding_gene 1047783 1048100 . + . ID=Thaps11969;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG32];external_name=Thaps11969;logic_name=jgi_thaps3 chr22 ensembl transcript 1047783 1048100 . + . ID=Thaps11969;Parent=Thaps11969;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1047783 1048100 . + 0 ID=Thaps11969;Parent=Thaps11969;rank=1 chr22 . exon 1047783 1048100 . + . ID=Thaps11969.1;Parent=Thaps11969;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 1049444 1050685 . - . ID=Thaps11970;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG33];external_name=Thaps11970;logic_name=jgi_thaps3 chr22 ensembl transcript 1049444 1050685 . - . ID=Thaps11970;Parent=Thaps11970;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1049444 1049834 . - 0 ID=Thaps11970;Parent=Thaps11970;rank=4 chr22 . exon 1049444 1049834 . - . ID=Thaps11970.4;Parent=Thaps11970;constitutive=1;ensembl_end_phase=1;rank=4 chr22 . CDS 1049957 1050125 . - 0 ID=Thaps11970;Parent=Thaps11970;rank=3 chr22 . exon 1049957 1050125 . - . ID=Thaps11970.3;Parent=Thaps11970;constitutive=1;ensembl_end_phase=1;rank=3 chr22 . CDS 1050246 1050561 . - 0 ID=Thaps11970;Parent=Thaps11970;rank=2 chr22 . exon 1050246 1050561 . - . ID=Thaps11970.2;Parent=Thaps11970;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 1050644 1050685 . - 0 ID=Thaps11970;Parent=Thaps11970;rank=1 chr22 . exon 1050644 1050685 . - . ID=Thaps11970.1;Parent=Thaps11970;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 1051107 1051877 . + . ID=Thaps25808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG34];external_name=Thaps25808;logic_name=jgi_thaps3 chr22 ensembl transcript 1051107 1051877 . + . ID=Thaps25808;Parent=Thaps25808;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1051107 1051877 . + 0 ID=Thaps25808;Parent=Thaps25808;rank=1 chr22 . exon 1051107 1051877 . + . ID=Thaps25808.1;Parent=Thaps25808;constitutive=1;rank=1 chr22 ensembl protein_coding_gene 1052681 1054025 . - . ID=Thaps25809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CG35];external_name=Thaps25809;logic_name=jgi_thaps3 chr22 ensembl transcript 1052681 1054025 . - . ID=Thaps25809;Parent=Thaps25809;biotype=protein_coding;logic_name=jgi_thaps3 chr22 . CDS 1052681 1053830 . - 0 ID=Thaps25809;Parent=Thaps25809;rank=2 chr22 . exon 1052681 1053830 . - . ID=Thaps25809.2;Parent=Thaps25809;constitutive=1;ensembl_end_phase=1;rank=2 chr22 . CDS 1053964 1054025 . - 0 ID=Thaps25809;Parent=Thaps25809;rank=1 chr22 . exon 1053964 1054025 . - . ID=Thaps25809.1;Parent=Thaps25809;constitutive=1;ensembl_end_phase=2;rank=1 ##gff-version 3 ##sequence-region 10 1 1105668 chr10 . repeat_region 1 280 . ? . description=trf chr10 . repeat_region 1 280 . ? . description=dust chr10 . repeat_region 3691 3743 . + . description=MuDR1_TP chr10 . repeat_region 4145 4579 . + . description=Harbinger2N_TP chr10 . repeat_region 4175 4224 . ? . description=dust chr10 . repeat_region 4248 4554 . ? . description=trf chr10 . repeat_region 4260 4575 . ? . description=dust chr10 . repeat_region 4437 4553 . ? . description=trf chr10 . repeat_region 4580 4696 . + . description=Harbinger2N_TP chr10 . repeat_region 4644 4686 . ? . description=trf chr10 . repeat_region 4644 4691 . ? . description=trf chr10 . repeat_region 4644 4692 . ? . description=dust chr10 . repeat_region 5359 5366 . ? . description=dust chr10 . repeat_region 6764 6887 . ? . description=dust chr10 . repeat_region 6777 6910 . ? . description=trf chr10 . repeat_region 6991 7176 . ? . description=trf chr10 . repeat_region 6991 7176 . ? . description=trf chr10 . repeat_region 6992 7141 . ? . description=trf chr10 . repeat_region 7191 7354 . ? . description=dust chr10 . repeat_region 7193 7354 . ? . description=trf chr10 . repeat_region 7361 7433 . ? . description=trf chr10 . repeat_region 8304 8557 . ? . description=dust chr10 . repeat_region 8318 8555 . ? . description=trf chr10 . repeat_region 8578 8703 . ? . description=trf chr10 . repeat_region 8762 8862 . ? . description=trf chr10 . repeat_region 9377 9516 . ? . description=trf chr10 . repeat_region 9826 9866 . ? . description=trf chr10 . repeat_region 9826 9866 . ? . description=dust chr10 ensembl protein_coding_gene 402 3249 . - . ID=Thaps8231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8W7];external_name=Thaps8231;logic_name=jgi_thaps3 chr10 ensembl transcript 402 3249 . - . ID=Thaps8231;Parent=Thaps8231;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 402 1454 . - 0 ID=Thaps8231;Parent=Thaps8231;rank=2 chr10 . exon 402 1454 . - . ID=Thaps8231.2;Parent=Thaps8231;constitutive=1;rank=2 chr10 . CDS 1552 3249 . - 0 ID=Thaps8231;Parent=Thaps8231;rank=1 chr10 . exon 1552 3249 . - . ID=Thaps8231.1;Parent=Thaps8231;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 4790 5122 . - . ID=Thaps8232;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8W8];external_name=Thaps8232;logic_name=jgi_thaps3 chr10 ensembl transcript 4790 5122 . - . ID=Thaps8232;Parent=Thaps8232;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 4790 5122 . - 0 ID=Thaps8232;Parent=Thaps8232;rank=1 chr10 . exon 4790 5122 . - . ID=Thaps8232.1;Parent=Thaps8232;constitutive=1;rank=1 chr10 . repeat_region 10912 11053 . + . description=SAT1_TP chr10 . repeat_region 11054 11227 . + . description=SAT1_TP chr10 . repeat_region 11228 11401 . + . description=SAT1_TP chr10 . repeat_region 11402 11575 . + . description=SAT1_TP chr10 . repeat_region 11590 11740 . + . description=SAT1_TP chr10 . repeat_region 11741 11914 . + . description=SAT1_TP chr10 . repeat_region 18067 20244 . ? . description=trf chr10 . repeat_region 18865 20679 . ? . description=trf chr10 . repeat_region 20090 20126 . ? . description=dust chr10 . repeat_region 20100 20126 . ? . description=trf chr10 . repeat_region 21456 21496 . ? . description=dust chr10 . repeat_region 21466 21496 . ? . description=trf chr10 . repeat_region 22466 23453 . ? . description=trf chr10 . repeat_region 25960 26364 . - . description=tp10_ASNotSingleton chr10 . repeat_region 28609 28752 . ? . description=trf chr10 ensembl protein_coding_gene 26462 28429 . - . ID=Thaps8233;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8W9];external_name=Thaps8233;logic_name=jgi_thaps3 chr10 ensembl transcript 26462 28429 . - . ID=Thaps8233;Parent=Thaps8233;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 26462 28429 . - 0 ID=Thaps8233;Parent=Thaps8233;rank=1 chr10 . exon 26462 28429 . - . ID=Thaps8233.1;Parent=Thaps8233;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 29680 39241 . - . ID=Thaps8234;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8X0];external_name=Thaps8234;logic_name=jgi_thaps3 chr10 ensembl transcript 29680 39241 . - . ID=Thaps8234;Parent=Thaps8234;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 29680 29695 . - 0 ID=Thaps8234;Parent=Thaps8234;rank=4 chr10 . exon 29680 29695 . - . ID=Thaps8234.4;Parent=Thaps8234;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 29743 35404 . - 0 ID=Thaps8234;Parent=Thaps8234;rank=3 chr10 . exon 29743 35404 . - . ID=Thaps8234.3;Parent=Thaps8234;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 35430 39098 . - 0 ID=Thaps8234;Parent=Thaps8234;rank=2 chr10 . CDS 39118 39241 . - 0 ID=Thaps8234;Parent=Thaps8234;rank=1 chr10 . repeat_region 39524 43006 . - . description=Copia7I_TP chr10 . exon 35430 39098 . - . ID=Thaps8234.2;Parent=Thaps8234;constitutive=1;rank=2 chr10 . exon 39118 39241 . - . ID=Thaps8234.1;Parent=Thaps8234;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . repeat_region 45789 47327 . + . description=tp3_ASNotSingleton chr10 . repeat_region 47458 47466 . ? . description=dust chr10 ensembl protein_coding_gene 43137 45567 . + . ID=Thaps8235;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8X1];external_name=Thaps8235;logic_name=jgi_thaps3 chr10 ensembl transcript 43137 45567 . + . ID=Thaps8235;Parent=Thaps8235;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 43137 43650 . + 0 ID=Thaps8235;Parent=Thaps8235;rank=1 chr10 . exon 43137 43650 . + . ID=Thaps8235.1;Parent=Thaps8235;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 43726 45415 . + 0 ID=Thaps8235;Parent=Thaps8235;rank=2 chr10 . exon 43726 45415 . + . ID=Thaps8235.2;Parent=Thaps8235;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 45486 45567 . + 0 ID=Thaps8235;Parent=Thaps8235;rank=3 chr10 . exon 45486 45567 . + . ID=Thaps8235.3;Parent=Thaps8235;constitutive=1;ensembl_end_phase=1;rank=3 chr10 ensembl protein_coding_gene 48258 48611 . + . ID=Thaps8236;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8X2];external_name=Thaps8236;logic_name=jgi_thaps3 chr10 ensembl transcript 48258 48611 . + . ID=Thaps8236;Parent=Thaps8236;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 48258 48611 . + 0 ID=Thaps8236;Parent=Thaps8236;rank=1 chr10 . exon 48258 48611 . + . ID=Thaps8236.1;Parent=Thaps8236;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 48951 49520 . - . ID=Thaps8237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8X3];external_name=Thaps8237;logic_name=jgi_thaps3 chr10 ensembl transcript 48951 49520 . - . ID=Thaps8237;Parent=Thaps8237;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 48951 49520 . - 0 ID=Thaps8237;Parent=Thaps8237;rank=1 chr10 . exon 48951 49520 . - . ID=Thaps8237.1;Parent=Thaps8237;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 51440 56995 . + . ID=Thaps24094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8X5];external_name=Thaps24094;logic_name=jgi_thaps3 chr10 ensembl transcript 51440 56995 . + . ID=Thaps24094;Parent=Thaps24094;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 51440 56995 . + 0 ID=Thaps24094;Parent=Thaps24094;rank=1 chr10 . exon 51440 56995 . + . ID=Thaps24094.1;Parent=Thaps24094;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 50137 51090 . + . ID=Thaps8238;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8X4];external_name=Thaps8238;logic_name=jgi_thaps3 chr10 ensembl transcript 50137 51090 . + . ID=Thaps8238;Parent=Thaps8238;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 50137 51090 . + 0 ID=Thaps8238;Parent=Thaps8238;rank=1 chr10 . exon 50137 51090 . + . ID=Thaps8238.1;Parent=Thaps8238;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 57206 59377 . - . ID=Thaps8240;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8X6];external_name=Thaps8240;logic_name=jgi_thaps3 chr10 ensembl transcript 57206 59377 . - . ID=Thaps8240;Parent=Thaps8240;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 57206 59377 . - 0 ID=Thaps8240;Parent=Thaps8240;rank=1 chr10 . exon 57206 59377 . - . ID=Thaps8240.1;Parent=Thaps8240;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 62898 64913 . - . ID=Thaps24096;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8X8];external_name=Thaps24096;logic_name=jgi_thaps3 chr10 ensembl transcript 62898 64913 . - . ID=Thaps24096;Parent=Thaps24096;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 62898 64370 . - 0 ID=Thaps24096;Parent=Thaps24096;rank=3 chr10 . exon 62898 64370 . - . ID=Thaps24096.3;Parent=Thaps24096;constitutive=1;rank=3 chr10 . CDS 64483 64730 . - 0 ID=Thaps24096;Parent=Thaps24096;rank=2 chr10 . exon 64483 64730 . - . ID=Thaps24096.2;Parent=Thaps24096;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 64790 64913 . - 0 ID=Thaps24096;Parent=Thaps24096;rank=1 chr10 . exon 64790 64913 . - . ID=Thaps24096.1;Parent=Thaps24096;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 60266 62350 . - . ID=Thaps269474;biotype=protein_coding;description=Putative uncharacterized protein HSF12 [Source:UniProtKB/TrEMBL%3BAcc:B8C8X7];external_name=HSF12;logic_name=jgi_thaps3 chr10 ensembl transcript 60266 62350 . - . ID=Thaps269474;Parent=Thaps269474;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 60266 61456 . - 0 ID=Thaps269474;Parent=Thaps269474;rank=4 chr10 . exon 60266 61456 . - . ID=Thaps269474.4;Parent=Thaps269474;constitutive=1;rank=4 chr10 . CDS 61554 61650 . - 0 ID=Thaps269474;Parent=Thaps269474;rank=3 chr10 . exon 61554 61650 . - . ID=Thaps269474.3;Parent=Thaps269474;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 61885 61930 . - 0 ID=Thaps269474;Parent=Thaps269474;rank=2 chr10 . exon 61885 61930 . - . ID=Thaps269474.2;Parent=Thaps269474;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 62194 62350 . - 0 ID=Thaps269474;Parent=Thaps269474;rank=1 chr10 . exon 62194 62350 . - . ID=Thaps269474.1;Parent=Thaps269474;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 65541 66146 . + . ID=Thaps8243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8X9];external_name=Thaps8243;logic_name=jgi_thaps3 chr10 ensembl transcript 65541 66146 . + . ID=Thaps8243;Parent=Thaps8243;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 65541 66146 . + 0 ID=Thaps8243;Parent=Thaps8243;rank=1 chr10 . exon 65541 66146 . + . ID=Thaps8243.1;Parent=Thaps8243;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 67065 69803 . - . ID=Thaps8244;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y0];external_name=Thaps8244;logic_name=jgi_thaps3 chr10 ensembl transcript 67065 69803 . - . ID=Thaps8244;Parent=Thaps8244;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 67065 67199 . - 0 ID=Thaps8244;Parent=Thaps8244;rank=4 chr10 . exon 67065 67199 . - . ID=Thaps8244.4;Parent=Thaps8244;constitutive=1;rank=4 chr10 . CDS 67289 67340 . - 0 ID=Thaps8244;Parent=Thaps8244;rank=3 chr10 . exon 67289 67340 . - . ID=Thaps8244.3;Parent=Thaps8244;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 67562 68018 . - 0 ID=Thaps8244;Parent=Thaps8244;rank=2 chr10 . exon 67562 68018 . - . ID=Thaps8244.2;Parent=Thaps8244;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 68129 69803 . - 0 ID=Thaps8244;Parent=Thaps8244;rank=1 chr10 . exon 68129 69803 . - . ID=Thaps8244.1;Parent=Thaps8244;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . repeat_region 71008 71016 . ? . description=dust chr10 . repeat_region 75862 75895 . ? . description=trf chr10 . repeat_region 77116 77124 . ? . description=dust chr10 ensembl tRNA_gene 77242 77321 . - . ID=EPrTPOG00000000031;biotype=tRNA;description=tRNA-Leu for anticodon AAG [Source:TRNASCAN_SE%3BAcc:tRNA-Leu];external_name=tRNA-Leu;logic_name=ncrna_eg chr10 ensembl transcript 77242 77321 . - . ID=EPrTPOT00000000009;Parent=EPrTPOG00000000031;biotype=tRNA;logic_name=ncrna_eg chr10 . exon 77242 77321 . - . ID=EPrTPOE00000000031;Parent=EPrTPOT00000000009;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 70110 75504 . + . ID=Thaps24097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y1];external_name=Thaps24097;logic_name=jgi_thaps3 chr10 ensembl transcript 70110 75504 . + . ID=Thaps24097;Parent=Thaps24097;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 70110 70640 . + 0 ID=Thaps24097;Parent=Thaps24097;rank=1 chr10 . exon 70110 70640 . + . ID=Thaps24097.1;Parent=Thaps24097;constitutive=1;rank=1 chr10 . CDS 70813 71411 . + 0 ID=Thaps24097;Parent=Thaps24097;rank=2 chr10 . exon 70813 71411 . + . ID=Thaps24097.2;Parent=Thaps24097;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 71545 73339 . + 0 ID=Thaps24097;Parent=Thaps24097;rank=3 chr10 . exon 71545 73339 . + . ID=Thaps24097.3;Parent=Thaps24097;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 73435 75504 . + 0 ID=Thaps24097;Parent=Thaps24097;rank=4 chr10 . exon 73435 75504 . + . ID=Thaps24097.4;Parent=Thaps24097;constitutive=1;rank=4 chr10 ensembl protein_coding_gene 78375 83425 . - . ID=Thaps24098;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y2];external_name=Thaps24098;logic_name=jgi_thaps3 chr10 ensembl transcript 78375 83425 . - . ID=Thaps24098;Parent=Thaps24098;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 78375 79043 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=11 chr10 . exon 78375 79043 . - . ID=Thaps24098.11;Parent=Thaps24098;constitutive=1;rank=11 chr10 . CDS 79135 80254 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=10 chr10 . exon 79135 80254 . - . ID=Thaps24098.10;Parent=Thaps24098;constitutive=1;ensembl_end_phase=1;rank=10 chr10 . CDS 80349 80477 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=9 chr10 . CDS 80560 80649 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=8 chr10 . CDS 80749 80934 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=7 chr10 . CDS 81008 81127 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=6 chr10 . CDS 81197 82007 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=5 chr10 . CDS 82111 82179 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=4 chr10 . CDS 82337 82399 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=3 chr10 . CDS 82549 82829 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=2 chr10 . CDS 82968 83425 . - 0 ID=Thaps24098;Parent=Thaps24098;rank=1 chr10 . exon 80349 80477 . - . ID=Thaps24098.9;Parent=Thaps24098;constitutive=1;rank=9 chr10 . exon 80560 80649 . - . ID=Thaps24098.8;Parent=Thaps24098;constitutive=1;rank=8 chr10 . exon 80749 80934 . - . ID=Thaps24098.7;Parent=Thaps24098;constitutive=1;rank=7 chr10 . exon 81008 81127 . - . ID=Thaps24098.6;Parent=Thaps24098;constitutive=1;rank=6 chr10 . exon 81197 82007 . - . ID=Thaps24098.5;Parent=Thaps24098;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . exon 82111 82179 . - . ID=Thaps24098.4;Parent=Thaps24098;constitutive=1;rank=4 chr10 . exon 82337 82399 . - . ID=Thaps24098.3;Parent=Thaps24098;constitutive=1;rank=3 chr10 . exon 82549 82829 . - . ID=Thaps24098.2;Parent=Thaps24098;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . exon 82968 83425 . - . ID=Thaps24098.1;Parent=Thaps24098;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 84295 85496 . - . ID=Thaps24099;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y3];external_name=Thaps24099;logic_name=jgi_thaps3 chr10 ensembl transcript 84295 85496 . - . ID=Thaps24099;Parent=Thaps24099;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 84295 84430 . - 0 ID=Thaps24099;Parent=Thaps24099;rank=3 chr10 . exon 84295 84430 . - . ID=Thaps24099.3;Parent=Thaps24099;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 84501 84777 . - 0 ID=Thaps24099;Parent=Thaps24099;rank=2 chr10 . exon 84501 84777 . - . ID=Thaps24099.2;Parent=Thaps24099;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 85082 85496 . - 0 ID=Thaps24099;Parent=Thaps24099;rank=1 chr10 . exon 85082 85496 . - . ID=Thaps24099.1;Parent=Thaps24099;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 86083 87067 . - . ID=Thaps8248;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y4];external_name=Thaps8248;logic_name=jgi_thaps3 chr10 ensembl transcript 86083 87067 . - . ID=Thaps8248;Parent=Thaps8248;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 86083 86262 . - 0 ID=Thaps8248;Parent=Thaps8248;rank=3 chr10 . exon 86083 86262 . - . ID=Thaps8248.3;Parent=Thaps8248;constitutive=1;rank=3 chr10 . CDS 86436 86617 . - 0 ID=Thaps8248;Parent=Thaps8248;rank=2 chr10 . exon 86436 86617 . - . ID=Thaps8248.2;Parent=Thaps8248;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 86791 87067 . - 0 ID=Thaps8248;Parent=Thaps8248;rank=1 chr10 . exon 86791 87067 . - . ID=Thaps8248.1;Parent=Thaps8248;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . repeat_region 93343 93376 . ? . description=trf chr10 . repeat_region 93343 93376 . ? . description=trf chr10 . repeat_region 93343 93376 . ? . description=dust chr10 . repeat_region 93896 93915 . ? . description=trf chr10 . repeat_region 98306 98331 . ? . description=dust chr10 . repeat_region 98307 98331 . ? . description=trf chr10 . repeat_region 98862 98890 . ? . description=trf chr10 . repeat_region 98866 98890 . ? . description=dust chr10 . repeat_region 99272 99284 . ? . description=dust chr10 ensembl protein_coding_gene 91790 94402 . + . ID=Thaps24100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y6];external_name=Thaps24100;logic_name=jgi_thaps3 chr10 ensembl transcript 91790 94402 . + . ID=Thaps24100;Parent=Thaps24100;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 91790 92980 . + 0 ID=Thaps24100;Parent=Thaps24100;rank=1 chr10 . exon 91790 92980 . + . ID=Thaps24100.1;Parent=Thaps24100;constitutive=1;rank=1 chr10 . CDS 93101 94402 . + 0 ID=Thaps24100;Parent=Thaps24100;rank=2 chr10 . exon 93101 94402 . + . ID=Thaps24100.2;Parent=Thaps24100;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 97308 100359 . + . ID=Thaps24101;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y7];external_name=Thaps24101;logic_name=jgi_thaps3 chr10 ensembl transcript 97308 100359 . + . ID=Thaps24101;Parent=Thaps24101;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 97308 97876 . + 0 ID=Thaps24101;Parent=Thaps24101;rank=1 chr10 . exon 97308 97876 . + . ID=Thaps24101.1;Parent=Thaps24101;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 97968 100359 . + 0 ID=Thaps24101;Parent=Thaps24101;rank=2 chr10 . exon 97968 100359 . + . ID=Thaps24101.2;Parent=Thaps24101;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 89975 90516 . + . ID=Thaps8249;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y5];external_name=Thaps8249;logic_name=jgi_thaps3 chr10 ensembl transcript 89975 90516 . + . ID=Thaps8249;Parent=Thaps8249;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 89975 90088 . + 0 ID=Thaps8249;Parent=Thaps8249;rank=1 chr10 . exon 89975 90088 . + . ID=Thaps8249.1;Parent=Thaps8249;constitutive=1;rank=1 chr10 . CDS 90199 90516 . + 0 ID=Thaps8249;Parent=Thaps8249;rank=2 chr10 . exon 90199 90516 . + . ID=Thaps8249.2;Parent=Thaps8249;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 100986 101663 . - . ID=Thaps36524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y8];external_name=Thaps36524;logic_name=jgi_thaps3 chr10 ensembl transcript 100986 101663 . - . ID=Thaps36524;Parent=Thaps36524;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 100986 101134 . - 0 ID=Thaps36524;Parent=Thaps36524;rank=2 chr10 . exon 100986 101134 . - . ID=Thaps36524.2;Parent=Thaps36524;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 101576 101663 . - 0 ID=Thaps36524;Parent=Thaps36524;rank=1 chr10 . exon 101576 101663 . - . ID=Thaps36524.1;Parent=Thaps36524;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 101874 104313 . + . ID=Thaps8253;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Y9];external_name=Thaps8253;logic_name=jgi_thaps3 chr10 ensembl transcript 101874 104313 . + . ID=Thaps8253;Parent=Thaps8253;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 101874 102212 . + 0 ID=Thaps8253;Parent=Thaps8253;rank=1 chr10 . exon 101874 102212 . + . ID=Thaps8253.1;Parent=Thaps8253;constitutive=1;rank=1 chr10 . CDS 102257 103547 . + 0 ID=Thaps8253;Parent=Thaps8253;rank=2 chr10 . exon 102257 103547 . + . ID=Thaps8253.2;Parent=Thaps8253;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 103658 104313 . + 0 ID=Thaps8253;Parent=Thaps8253;rank=3 chr10 . exon 103658 104313 . + . ID=Thaps8253.3;Parent=Thaps8253;constitutive=1;ensembl_end_phase=2;rank=3 chr10 ensembl protein_coding_gene 104651 105943 . - . ID=Thaps8254;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z0];external_name=Thaps8254;logic_name=jgi_thaps3 chr10 ensembl transcript 104651 105943 . - . ID=Thaps8254;Parent=Thaps8254;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 104651 105943 . - 0 ID=Thaps8254;Parent=Thaps8254;rank=1 chr10 . exon 104651 105943 . - . ID=Thaps8254.1;Parent=Thaps8254;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 106299 110138 . + . ID=Thaps8255;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z1];external_name=Thaps8255;logic_name=jgi_thaps3 chr10 ensembl transcript 106299 110138 . + . ID=Thaps8255;Parent=Thaps8255;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 106299 107061 . + 0 ID=Thaps8255;Parent=Thaps8255;rank=1 chr10 . exon 106299 107061 . + . ID=Thaps8255.1;Parent=Thaps8255;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 107150 109395 . + 0 ID=Thaps8255;Parent=Thaps8255;rank=2 chr10 . exon 107150 109395 . + . ID=Thaps8255.2;Parent=Thaps8255;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 109611 110138 . + 0 ID=Thaps8255;Parent=Thaps8255;rank=3 chr10 . repeat_region 115797 115823 . ? . description=trf chr10 ensembl protein_coding_gene 114469 115937 . + . ID=Thaps269475;biotype=protein_coding;description=Sir2-type regulatory transcription factor silent information regulator protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z3];external_name=Thaps269475;logic_name=jgi_thaps3 chr10 ensembl transcript 114469 115937 . + . ID=Thaps269475;Parent=Thaps269475;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 114469 114513 . + 0 ID=Thaps269475;Parent=Thaps269475;rank=1 chr10 . exon 114469 114513 . + . ID=Thaps269475.1;Parent=Thaps269475;constitutive=1;rank=1 chr10 . CDS 114711 114837 . + 0 ID=Thaps269475;Parent=Thaps269475;rank=2 chr10 . exon 114711 114837 . + . ID=Thaps269475.2;Parent=Thaps269475;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 114967 115062 . + 0 ID=Thaps269475;Parent=Thaps269475;rank=3 chr10 . exon 114967 115062 . + . ID=Thaps269475.3;Parent=Thaps269475;constitutive=1;rank=3 chr10 . CDS 115279 115320 . + 0 ID=Thaps269475;Parent=Thaps269475;rank=4 chr10 . exon 115279 115320 . + . ID=Thaps269475.4;Parent=Thaps269475;constitutive=1;rank=4 chr10 . CDS 115381 115770 . + 0 ID=Thaps269475;Parent=Thaps269475;rank=5 chr10 . exon 115381 115770 . + . ID=Thaps269475.5;Parent=Thaps269475;constitutive=1;rank=5 chr10 . CDS 115798 115937 . + 0 ID=Thaps269475;Parent=Thaps269475;rank=6 chr10 . exon 115798 115937 . + . ID=Thaps269475.6;Parent=Thaps269475;constitutive=1;ensembl_end_phase=2;rank=6 chr10 . exon 109611 110138 . + . ID=Thaps8255.3;Parent=Thaps8255;constitutive=1;rank=3 chr10 ensembl protein_coding_gene 113133 114135 . - . ID=Thaps8256;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z2];external_name=Thaps8256;logic_name=jgi_thaps3 chr10 ensembl transcript 113133 114135 . - . ID=Thaps8256;Parent=Thaps8256;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 113133 113389 . - 0 ID=Thaps8256;Parent=Thaps8256;rank=3 chr10 . exon 113133 113389 . - . ID=Thaps8256.3;Parent=Thaps8256;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 113563 113645 . - 0 ID=Thaps8256;Parent=Thaps8256;rank=2 chr10 . exon 113563 113645 . - . ID=Thaps8256.2;Parent=Thaps8256;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 113768 114135 . - 0 ID=Thaps8256;Parent=Thaps8256;rank=1 chr10 . exon 113768 114135 . - . ID=Thaps8256.1;Parent=Thaps8256;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 116389 121936 . - . ID=Thaps8258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z4];external_name=Thaps8258;logic_name=jgi_thaps3 chr10 ensembl transcript 116389 121936 . - . ID=Thaps8258;Parent=Thaps8258;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 116389 116786 . - 0 ID=Thaps8258;Parent=Thaps8258;rank=6 chr10 . exon 116389 116786 . - . ID=Thaps8258.6;Parent=Thaps8258;constitutive=1;ensembl_end_phase=2;rank=6 chr10 . CDS 116874 117374 . - 0 ID=Thaps8258;Parent=Thaps8258;rank=5 chr10 . exon 116874 117374 . - . ID=Thaps8258.5;Parent=Thaps8258;constitutive=1;rank=5 chr10 . CDS 117532 118174 . - 0 ID=Thaps8258;Parent=Thaps8258;rank=4 chr10 . exon 117532 118174 . - . ID=Thaps8258.4;Parent=Thaps8258;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 118259 118368 . - 0 ID=Thaps8258;Parent=Thaps8258;rank=3 chr10 . exon 118259 118368 . - . ID=Thaps8258.3;Parent=Thaps8258;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 118448 118681 . - 0 ID=Thaps8258;Parent=Thaps8258;rank=2 chr10 . exon 118448 118681 . - . ID=Thaps8258.2;Parent=Thaps8258;constitutive=1;rank=2 chr10 . CDS 118759 121936 . - 0 ID=Thaps8258;Parent=Thaps8258;rank=1 chr10 . exon 118759 121936 . - . ID=Thaps8258.1;Parent=Thaps8258;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . repeat_region 122015 122025 . ? . description=dust chr10 . repeat_region 123821 123845 . ? . description=dust chr10 . repeat_region 124409 124429 . ? . description=dust chr10 ensembl protein_coding_gene 124501 125620 . + . ID=Thaps36345;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z6];external_name=Thaps36345;logic_name=jgi_thaps3 chr10 ensembl transcript 124501 125620 . + . ID=Thaps36345;Parent=Thaps36345;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 124501 124640 . + 0 ID=Thaps36345;Parent=Thaps36345;rank=1 chr10 . exon 124501 124640 . + . ID=Thaps36345.1;Parent=Thaps36345;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 124744 125620 . + 0 ID=Thaps36345;Parent=Thaps36345;rank=2 chr10 . exon 124744 125620 . + . ID=Thaps36345.2;Parent=Thaps36345;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 123077 124486 . + . ID=Thaps8259;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z5];external_name=Thaps8259;logic_name=jgi_thaps3 chr10 ensembl transcript 123077 124486 . + . ID=Thaps8259;Parent=Thaps8259;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 123077 124486 . + 0 ID=Thaps8259;Parent=Thaps8259;rank=1 chr10 . exon 123077 124486 . + . ID=Thaps8259.1;Parent=Thaps8259;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 125725 127370 . - . ID=Thaps8261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z7];external_name=Thaps8261;logic_name=jgi_thaps3 chr10 ensembl transcript 125725 127370 . - . ID=Thaps8261;Parent=Thaps8261;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 125725 126819 . - 0 ID=Thaps8261;Parent=Thaps8261;rank=2 chr10 . exon 125725 126819 . - . ID=Thaps8261.2;Parent=Thaps8261;constitutive=1;rank=2 chr10 . CDS 126905 127370 . - 0 ID=Thaps8261;Parent=Thaps8261;rank=1 chr10 . exon 126905 127370 . - . ID=Thaps8261.1;Parent=Thaps8261;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 127574 129707 . + . ID=Thaps8262;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z8];external_name=Thaps8262;logic_name=jgi_thaps3 chr10 ensembl transcript 127574 129707 . + . ID=Thaps8262;Parent=Thaps8262;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 127574 127907 . + 0 ID=Thaps8262;Parent=Thaps8262;rank=1 chr10 . exon 127574 127907 . + . ID=Thaps8262.1;Parent=Thaps8262;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 127935 128803 . + 0 ID=Thaps8262;Parent=Thaps8262;rank=2 chr10 . exon 127935 128803 . + . ID=Thaps8262.2;Parent=Thaps8262;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 128828 129085 . + 0 ID=Thaps8262;Parent=Thaps8262;rank=3 chr10 . exon 128828 129085 . + . ID=Thaps8262.3;Parent=Thaps8262;constitutive=1;rank=3 chr10 . CDS 129144 129216 . + 0 ID=Thaps8262;Parent=Thaps8262;rank=4 chr10 . exon 129144 129216 . + . ID=Thaps8262.4;Parent=Thaps8262;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 129280 129500 . + 0 ID=Thaps8262;Parent=Thaps8262;rank=5 chr10 . exon 129280 129500 . + . ID=Thaps8262.5;Parent=Thaps8262;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . CDS 129567 129707 . + 0 ID=Thaps8262;Parent=Thaps8262;rank=6 chr10 ensembl protein_coding_gene 133653 134921 . + . ID=Thaps24106;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C900];external_name=Thaps24106;logic_name=jgi_thaps3 chr10 ensembl transcript 133653 134921 . + . ID=Thaps24106;Parent=Thaps24106;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 133653 134921 . + 0 ID=Thaps24106;Parent=Thaps24106;rank=1 chr10 . exon 133653 134921 . + . ID=Thaps24106.1;Parent=Thaps24106;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 136967 139059 . + . ID=Thaps24108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C902];external_name=Thaps24108;logic_name=jgi_thaps3 chr10 ensembl transcript 136967 139059 . + . ID=Thaps24108;Parent=Thaps24108;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 136967 137511 . + 0 ID=Thaps24108;Parent=Thaps24108;rank=1 chr10 . exon 136967 137511 . + . ID=Thaps24108.1;Parent=Thaps24108;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 137632 138730 . + 0 ID=Thaps24108;Parent=Thaps24108;rank=2 chr10 . exon 137632 138730 . + . ID=Thaps24108.2;Parent=Thaps24108;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 138826 139059 . + 0 ID=Thaps24108;Parent=Thaps24108;rank=3 chr10 . exon 138826 139059 . + . ID=Thaps24108.3;Parent=Thaps24108;constitutive=1;rank=3 chr10 ensembl protein_coding_gene 135729 136238 . + . ID=Thaps36454;biotype=protein_coding;description=Ribosomal protein [Source:UniProtKB/TrEMBL%3BAcc:B8C901];external_name=Thaps36454;logic_name=jgi_thaps3 chr10 ensembl transcript 135729 136238 . + . ID=Thaps36454;Parent=Thaps36454;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 135729 136238 . + 0 ID=Thaps36454;Parent=Thaps36454;rank=1 chr10 . exon 135729 136238 . + . ID=Thaps36454.1;Parent=Thaps36454;constitutive=1;rank=1 chr10 . exon 129567 129707 . + . ID=Thaps8262.6;Parent=Thaps8262;constitutive=1;rank=6 chr10 ensembl protein_coding_gene 130448 132877 . + . ID=Thaps8263;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Z9];external_name=Thaps8263;logic_name=jgi_thaps3 chr10 ensembl transcript 130448 132877 . + . ID=Thaps8263;Parent=Thaps8263;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 130448 130694 . + 0 ID=Thaps8263;Parent=Thaps8263;rank=1 chr10 . exon 130448 130694 . + . ID=Thaps8263.1;Parent=Thaps8263;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 130943 131268 . + 0 ID=Thaps8263;Parent=Thaps8263;rank=2 chr10 . exon 130943 131268 . + . ID=Thaps8263.2;Parent=Thaps8263;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 131367 131715 . + 0 ID=Thaps8263;Parent=Thaps8263;rank=3 chr10 . exon 131367 131715 . + . ID=Thaps8263.3;Parent=Thaps8263;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 132098 132164 . + 0 ID=Thaps8263;Parent=Thaps8263;rank=4 chr10 . exon 132098 132164 . + . ID=Thaps8263.4;Parent=Thaps8263;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 132358 132678 . + 0 ID=Thaps8263;Parent=Thaps8263;rank=5 chr10 . exon 132358 132678 . + . ID=Thaps8263.5;Parent=Thaps8263;constitutive=1;rank=5 chr10 . CDS 132763 132877 . + 0 ID=Thaps8263;Parent=Thaps8263;rank=6 chr10 . exon 132763 132877 . + . ID=Thaps8263.6;Parent=Thaps8263;constitutive=1;ensembl_end_phase=1;rank=6 chr10 . repeat_region 139472 139527 . ? . description=dust chr10 . repeat_region 141055 141110 . ? . description=trf chr10 . repeat_region 141055 141119 . ? . description=dust chr10 . repeat_region 141754 141775 . ? . description=trf chr10 . repeat_region 141754 141775 . ? . description=dust chr10 . repeat_region 143544 143563 . ? . description=trf chr10 . repeat_region 143544 143563 . ? . description=dust chr10 . repeat_region 144522 144576 . ? . description=trf chr10 ensembl protein_coding_gene 139488 140726 . - . ID=Thaps24109;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C903];external_name=Thaps24109;logic_name=jgi_thaps3 chr10 ensembl transcript 139488 140726 . - . ID=Thaps24109;Parent=Thaps24109;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 139488 140726 . - 0 ID=Thaps24109;Parent=Thaps24109;rank=1 chr10 . exon 139488 140726 . - . ID=Thaps24109.1;Parent=Thaps24109;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 140979 142739 . + . ID=Thaps24110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C904];external_name=Thaps24110;logic_name=jgi_thaps3 chr10 ensembl transcript 140979 142739 . + . ID=Thaps24110;Parent=Thaps24110;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 140979 142157 . + 0 ID=Thaps24110;Parent=Thaps24110;rank=1 chr10 . exon 140979 142157 . + . ID=Thaps24110.1;Parent=Thaps24110;constitutive=1;rank=1 chr10 . CDS 142187 142331 . + 0 ID=Thaps24110;Parent=Thaps24110;rank=2 chr10 . exon 142187 142331 . + . ID=Thaps24110.2;Parent=Thaps24110;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 142420 142739 . + 0 ID=Thaps24110;Parent=Thaps24110;rank=3 chr10 . exon 142420 142739 . + . ID=Thaps24110.3;Parent=Thaps24110;constitutive=1;ensembl_end_phase=2;rank=3 chr10 ensembl protein_coding_gene 144337 147246 . + . ID=Thaps8269;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C905];external_name=Thaps8269;logic_name=jgi_thaps3 chr10 ensembl transcript 144337 147246 . + . ID=Thaps8269;Parent=Thaps8269;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 144337 144614 . + 0 ID=Thaps8269;Parent=Thaps8269;rank=1 chr10 . exon 144337 144614 . + . ID=Thaps8269.1;Parent=Thaps8269;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 144691 145128 . + 0 ID=Thaps8269;Parent=Thaps8269;rank=2 chr10 . exon 144691 145128 . + . ID=Thaps8269.2;Parent=Thaps8269;constitutive=1;rank=2 chr10 . CDS 145221 146947 . + 0 ID=Thaps8269;Parent=Thaps8269;rank=3 chr10 . exon 145221 146947 . + . ID=Thaps8269.3;Parent=Thaps8269;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 147029 147246 . + 0 ID=Thaps8269;Parent=Thaps8269;rank=4 chr10 . exon 147029 147246 . + . ID=Thaps8269.4;Parent=Thaps8269;constitutive=1;ensembl_end_phase=2;rank=4 chr10 ensembl protein_coding_gene 149411 150823 . - . ID=Thaps8270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C906];external_name=Thaps8270;logic_name=jgi_thaps3 chr10 ensembl transcript 149411 150823 . - . ID=Thaps8270;Parent=Thaps8270;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 149411 150823 . - 0 ID=Thaps8270;Parent=Thaps8270;rank=1 chr10 . exon 149411 150823 . - . ID=Thaps8270.1;Parent=Thaps8270;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 151340 153166 . - . ID=Thaps24111;biotype=protein_coding;description=Probable lipase [Source:UniProtKB/TrEMBL%3BAcc:B8C907];external_name=Thaps24111;logic_name=jgi_thaps3 chr10 ensembl transcript 151340 153166 . - . ID=Thaps24111;Parent=Thaps24111;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 151340 153166 . - 0 ID=Thaps24111;Parent=Thaps24111;rank=1 chr10 . exon 151340 153166 . - . ID=Thaps24111.1;Parent=Thaps24111;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 153832 155863 . + . ID=Thaps24112;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C908];external_name=Thaps24112;logic_name=jgi_thaps3 chr10 ensembl transcript 153832 155863 . + . ID=Thaps24112;Parent=Thaps24112;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 153832 153915 . + 0 ID=Thaps24112;Parent=Thaps24112;rank=1 chr10 . exon 153832 153915 . + . ID=Thaps24112.1;Parent=Thaps24112;constitutive=1;rank=1 chr10 . CDS 154208 154254 . + 0 ID=Thaps24112;Parent=Thaps24112;rank=2 chr10 . exon 154208 154254 . + . ID=Thaps24112.2;Parent=Thaps24112;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 154633 155863 . + 0 ID=Thaps24112;Parent=Thaps24112;rank=3 chr10 . exon 154633 155863 . + . ID=Thaps24112.3;Parent=Thaps24112;constitutive=1;ensembl_end_phase=1;rank=3 chr10 ensembl protein_coding_gene 156507 158960 . - . ID=Thaps8273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C909];external_name=Thaps8273;logic_name=jgi_thaps3 chr10 ensembl transcript 156507 158960 . - . ID=Thaps8273;Parent=Thaps8273;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 156507 157170 . - 0 ID=Thaps8273;Parent=Thaps8273;rank=4 chr10 . exon 156507 157170 . - . ID=Thaps8273.4;Parent=Thaps8273;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 157256 157910 . - 0 ID=Thaps8273;Parent=Thaps8273;rank=3 chr10 . exon 157256 157910 . - . ID=Thaps8273.3;Parent=Thaps8273;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 158044 158083 . - 0 ID=Thaps8273;Parent=Thaps8273;rank=2 chr10 . exon 158044 158083 . - . ID=Thaps8273.2;Parent=Thaps8273;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 158202 158960 . - 0 ID=Thaps8273;Parent=Thaps8273;rank=1 chr10 . exon 158202 158960 . - . ID=Thaps8273.1;Parent=Thaps8273;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 159292 161106 . + . ID=Thaps8274;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C910];external_name=Thaps8274;logic_name=jgi_thaps3 chr10 ensembl transcript 159292 161106 . + . ID=Thaps8274;Parent=Thaps8274;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 159292 160306 . + 0 ID=Thaps8274;Parent=Thaps8274;rank=1 chr10 . exon 159292 160306 . + . ID=Thaps8274.1;Parent=Thaps8274;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 160464 160964 . + 0 ID=Thaps8274;Parent=Thaps8274;rank=2 chr10 . CDS 161072 161106 . + 0 ID=Thaps8274;Parent=Thaps8274;rank=3 chr10 . repeat_region 164051 164071 . ? . description=dust chr10 ensembl protein_coding_gene 161485 163060 . - . ID=Thaps24113;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C911];external_name=Thaps24113;logic_name=jgi_thaps3 chr10 ensembl transcript 161485 163060 . - . ID=Thaps24113;Parent=Thaps24113;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 161485 162477 . - 0 ID=Thaps24113;Parent=Thaps24113;rank=2 chr10 . exon 161485 162477 . - . ID=Thaps24113.2;Parent=Thaps24113;constitutive=1;rank=2 chr10 . CDS 162557 163060 . - 0 ID=Thaps24113;Parent=Thaps24113;rank=1 chr10 . exon 162557 163060 . - . ID=Thaps24113.1;Parent=Thaps24113;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 164072 165118 . - . ID=Thaps24114;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C912];external_name=Thaps24114;logic_name=jgi_thaps3 chr10 ensembl transcript 164072 165118 . - . ID=Thaps24114;Parent=Thaps24114;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 164072 165118 . - 0 ID=Thaps24114;Parent=Thaps24114;rank=1 chr10 . exon 164072 165118 . - . ID=Thaps24114.1;Parent=Thaps24114;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 165640 167049 . + . ID=Thaps24115;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C913];external_name=Thaps24115;logic_name=jgi_thaps3 chr10 ensembl transcript 165640 167049 . + . ID=Thaps24115;Parent=Thaps24115;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 165640 167049 . + 0 ID=Thaps24115;Parent=Thaps24115;rank=1 chr10 . exon 165640 167049 . + . ID=Thaps24115.1;Parent=Thaps24115;constitutive=1;rank=1 chr10 . exon 160464 160964 . + . ID=Thaps8274.2;Parent=Thaps8274;constitutive=1;rank=2 chr10 . exon 161072 161106 . + . ID=Thaps8274.3;Parent=Thaps8274;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . repeat_region 174476 174651 . + . description=Copia3LTR_TP chr10 . repeat_region 174652 177225 . + . description=Copia3I_TP chr10 . repeat_region 174713 174739 . ? . description=trf chr10 . repeat_region 175541 175584 . ? . description=trf chr10 . repeat_region 175958 176291 . ? . description=trf chr10 . repeat_region 176168 176498 . ? . description=trf chr10 . repeat_region 177226 177401 . + . description=Copia3LTR_TP chr10 ensembl protein_coding_gene 173257 173412 . + . ID=Thaps17956;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C914];external_name=Thaps17956;logic_name=jgi_thaps3 chr10 ensembl transcript 173257 173412 . + . ID=Thaps17956;Parent=Thaps17956;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 173257 173412 . + 0 ID=Thaps17956;Parent=Thaps17956;rank=1 chr10 . exon 173257 173412 . + . ID=Thaps17956.1;Parent=Thaps17956;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 178890 180163 . + . ID=Thaps263622;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C915];external_name=Thaps263622;logic_name=jgi_thaps3 chr10 ensembl transcript 178890 180163 . + . ID=Thaps263622;Parent=Thaps263622;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 178890 179013 . + 0 ID=Thaps263622;Parent=Thaps263622;rank=1 chr10 . exon 178890 179013 . + . ID=Thaps263622.1;Parent=Thaps263622;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 179089 179111 . + 0 ID=Thaps263622;Parent=Thaps263622;rank=2 chr10 . exon 179089 179111 . + . ID=Thaps263622.2;Parent=Thaps263622;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 179200 179411 . + 0 ID=Thaps263622;Parent=Thaps263622;rank=3 chr10 . exon 179200 179411 . + . ID=Thaps263622.3;Parent=Thaps263622;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 179492 179651 . + 0 ID=Thaps263622;Parent=Thaps263622;rank=4 chr10 . CDS 179732 180031 . + 0 ID=Thaps263622;Parent=Thaps263622;rank=5 chr10 . CDS 180136 180163 . + 0 ID=Thaps263622;Parent=Thaps263622;rank=6 chr10 . repeat_region 183066 183111 . ? . description=dust chr10 . repeat_region 186038 186658 . ? . description=dust chr10 . repeat_region 186908 186991 . ? . description=dust chr10 . exon 179492 179651 . + . ID=Thaps263622.4;Parent=Thaps263622;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . exon 179732 180031 . + . ID=Thaps263622.5;Parent=Thaps263622;constitutive=1;rank=5 chr10 . exon 180136 180163 . + . ID=Thaps263622.6;Parent=Thaps263622;constitutive=1;ensembl_end_phase=1;rank=6 chr10 ensembl protein_coding_gene 184197 189552 . - . ID=Thaps36322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C918];external_name=Thaps36322;logic_name=jgi_thaps3 chr10 ensembl transcript 184197 189552 . - . ID=Thaps36322;Parent=Thaps36322;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 184197 184347 . - 0 ID=Thaps36322;Parent=Thaps36322;rank=5 chr10 . exon 184197 184347 . - . ID=Thaps36322.5;Parent=Thaps36322;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 184429 184487 . - 0 ID=Thaps36322;Parent=Thaps36322;rank=4 chr10 . exon 184429 184487 . - . ID=Thaps36322.4;Parent=Thaps36322;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 184570 184598 . - 0 ID=Thaps36322;Parent=Thaps36322;rank=3 chr10 . exon 184570 184598 . - . ID=Thaps36322.3;Parent=Thaps36322;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 188528 189112 . - 0 ID=Thaps36322;Parent=Thaps36322;rank=2 chr10 . exon 188528 189112 . - . ID=Thaps36322.2;Parent=Thaps36322;constitutive=1;rank=2 chr10 . CDS 189213 189552 . - 0 ID=Thaps36322;Parent=Thaps36322;rank=1 chr10 . exon 189213 189552 . - . ID=Thaps36322.1;Parent=Thaps36322;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 182226 183017 . - . ID=Thaps8280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C916];external_name=Thaps8280;logic_name=jgi_thaps3 chr10 ensembl transcript 182226 183017 . - . ID=Thaps8280;Parent=Thaps8280;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 182226 183017 . - 0 ID=Thaps8280;Parent=Thaps8280;rank=1 chr10 . exon 182226 183017 . - . ID=Thaps8280.1;Parent=Thaps8280;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 183339 183869 . + . ID=Thaps8281;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C917];external_name=Thaps8281;logic_name=jgi_thaps3 chr10 ensembl transcript 183339 183869 . + . ID=Thaps8281;Parent=Thaps8281;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 183339 183869 . + 0 ID=Thaps8281;Parent=Thaps8281;rank=1 chr10 . exon 183339 183869 . + . ID=Thaps8281.1;Parent=Thaps8281;constitutive=1;rank=1 chr10 . repeat_region 194469 194489 . ? . description=trf chr10 . repeat_region 196611 196666 . ? . description=trf chr10 ensembl protein_coding_gene 191531 194597 . - . ID=Thaps24118;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C919];external_name=Thaps24118;logic_name=jgi_thaps3 chr10 ensembl transcript 191531 194597 . - . ID=Thaps24118;Parent=Thaps24118;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 191531 192425 . - 0 ID=Thaps24118;Parent=Thaps24118;rank=2 chr10 . exon 191531 192425 . - . ID=Thaps24118.2;Parent=Thaps24118;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 192517 194597 . - 0 ID=Thaps24118;Parent=Thaps24118;rank=1 chr10 . exon 192517 194597 . - . ID=Thaps24118.1;Parent=Thaps24118;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 208031 209881 . + . ID=Thaps36334;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C920];external_name=Thaps36334;logic_name=jgi_thaps3 chr10 ensembl transcript 208031 209881 . + . ID=Thaps36334;Parent=Thaps36334;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 208031 208622 . + 0 ID=Thaps36334;Parent=Thaps36334;rank=1 chr10 . exon 208031 208622 . + . ID=Thaps36334.1;Parent=Thaps36334;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 208704 209276 . + 0 ID=Thaps36334;Parent=Thaps36334;rank=2 chr10 . exon 208704 209276 . + . ID=Thaps36334.2;Parent=Thaps36334;constitutive=1;rank=2 chr10 . CDS 209355 209881 . + 0 ID=Thaps36334;Parent=Thaps36334;rank=3 chr10 . repeat_region 215276 215338 . + . description=PtCopiaLikeTe2 chr10 . repeat_region 215425 215943 . + . description=Copia6I_TP chr10 . repeat_region 216628 216835 . + . description=Copia6I_TP chr10 . repeat_region 218282 218290 . ? . description=dust chr10 . repeat_region 218737 218765 . ? . description=trf chr10 . exon 209355 209881 . + . ID=Thaps36334.3;Parent=Thaps36334;constitutive=1;ensembl_end_phase=2;rank=3 chr10 ensembl protein_coding_gene 210062 211427 . - . ID=Thaps8287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C921];external_name=Thaps8287;logic_name=jgi_thaps3 chr10 ensembl transcript 210062 211427 . - . ID=Thaps8287;Parent=Thaps8287;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 210062 210082 . - 0 ID=Thaps8287;Parent=Thaps8287;rank=2 chr10 . exon 210062 210082 . - . ID=Thaps8287.2;Parent=Thaps8287;constitutive=1;rank=2 chr10 . CDS 210105 211427 . - 0 ID=Thaps8287;Parent=Thaps8287;rank=1 chr10 . exon 210105 211427 . - . ID=Thaps8287.1;Parent=Thaps8287;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 212648 214645 . - . ID=Thaps8288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C922];external_name=Thaps8288;logic_name=jgi_thaps3 chr10 ensembl transcript 212648 214645 . - . ID=Thaps8288;Parent=Thaps8288;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 212648 214645 . - 0 ID=Thaps8288;Parent=Thaps8288;rank=1 chr10 . exon 212648 214645 . - . ID=Thaps8288.1;Parent=Thaps8288;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 216149 217295 . + . ID=Thaps8289;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C923];external_name=Thaps8289;logic_name=jgi_thaps3 chr10 ensembl transcript 216149 217295 . + . ID=Thaps8289;Parent=Thaps8289;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 216149 216327 . + 0 ID=Thaps8289;Parent=Thaps8289;rank=1 chr10 . exon 216149 216327 . + . ID=Thaps8289.1;Parent=Thaps8289;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 216497 216606 . + 0 ID=Thaps8289;Parent=Thaps8289;rank=2 chr10 . exon 216497 216606 . + . ID=Thaps8289.2;Parent=Thaps8289;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 216872 217001 . + 0 ID=Thaps8289;Parent=Thaps8289;rank=3 chr10 . exon 216872 217001 . + . ID=Thaps8289.3;Parent=Thaps8289;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 217039 217215 . + 0 ID=Thaps8289;Parent=Thaps8289;rank=4 chr10 . exon 217039 217215 . + . ID=Thaps8289.4;Parent=Thaps8289;constitutive=1;rank=4 chr10 . CDS 217253 217295 . + 0 ID=Thaps8289;Parent=Thaps8289;rank=5 chr10 . exon 217253 217295 . + . ID=Thaps8289.5;Parent=Thaps8289;constitutive=1;ensembl_end_phase=1;rank=5 chr10 ensembl protein_coding_gene 218309 219205 . - . ID=Thaps8290;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C924];external_name=Thaps8290;logic_name=jgi_thaps3 chr10 ensembl transcript 218309 219205 . - . ID=Thaps8290;Parent=Thaps8290;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 218309 218513 . - 0 ID=Thaps8290;Parent=Thaps8290;rank=5 chr10 . exon 218309 218513 . - . ID=Thaps8290.5;Parent=Thaps8290;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 218608 218689 . - 0 ID=Thaps8290;Parent=Thaps8290;rank=4 chr10 . exon 218608 218689 . - . ID=Thaps8290.4;Parent=Thaps8290;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 218782 218813 . - 0 ID=Thaps8290;Parent=Thaps8290;rank=3 chr10 . exon 218782 218813 . - . ID=Thaps8290.3;Parent=Thaps8290;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 218907 218994 . - 0 ID=Thaps8290;Parent=Thaps8290;rank=2 chr10 . exon 218907 218994 . - . ID=Thaps8290.2;Parent=Thaps8290;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 219076 219205 . - 0 ID=Thaps8290;Parent=Thaps8290;rank=1 chr10 . exon 219076 219205 . - . ID=Thaps8290.1;Parent=Thaps8290;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . repeat_region 219587 219760 . - . description=SAT1_TP chr10 . repeat_region 219761 219934 . - . description=SAT1_TP chr10 . repeat_region 219935 220108 . - . description=SAT1_TP chr10 . repeat_region 220109 220263 . - . description=SAT1_TP chr10 . repeat_region 220262 220432 . - . description=SAT1_TP chr10 . repeat_region 220433 220581 . - . description=SAT1_TP chr10 ensembl protein_coding_gene 222437 224974 . - . ID=Thaps24120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C926];external_name=Thaps24120;logic_name=jgi_thaps3 chr10 ensembl transcript 222437 224974 . - . ID=Thaps24120;Parent=Thaps24120;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 222437 223291 . - 0 ID=Thaps24120;Parent=Thaps24120;rank=2 chr10 . exon 222437 223291 . - . ID=Thaps24120.2;Parent=Thaps24120;constitutive=1;rank=2 chr10 . CDS 223388 224974 . - 0 ID=Thaps24120;Parent=Thaps24120;rank=1 chr10 . exon 223388 224974 . - . ID=Thaps24120.1;Parent=Thaps24120;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 219496 220683 . - . ID=Thaps263627;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C925];external_name=Thaps263627;logic_name=jgi_thaps3 chr10 ensembl transcript 219496 220683 . - . ID=Thaps263627;Parent=Thaps263627;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 219496 219914 . - 0 ID=Thaps263627;Parent=Thaps263627;rank=2 chr10 . exon 219496 219914 . - . ID=Thaps263627.2;Parent=Thaps263627;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 220101 220683 . - 0 ID=Thaps263627;Parent=Thaps263627;rank=1 chr10 . exon 220101 220683 . - . ID=Thaps263627.1;Parent=Thaps263627;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 225470 227236 . + . ID=Thaps8292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C927];external_name=Thaps8292;logic_name=jgi_thaps3 chr10 ensembl transcript 225470 227236 . + . ID=Thaps8292;Parent=Thaps8292;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 225470 227236 . + 0 ID=Thaps8292;Parent=Thaps8292;rank=1 chr10 . exon 225470 227236 . + . ID=Thaps8292.1;Parent=Thaps8292;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 228118 228711 . - . ID=Thaps8293;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C928];external_name=Thaps8293;logic_name=jgi_thaps3 chr10 ensembl transcript 228118 228711 . - . ID=Thaps8293;Parent=Thaps8293;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 228118 228711 . - 0 ID=Thaps8293;Parent=Thaps8293;rank=1 chr10 . exon 228118 228711 . - . ID=Thaps8293.1;Parent=Thaps8293;constitutive=1;rank=1 chr10 . repeat_region 230510 230523 . ? . description=dust chr10 . repeat_region 235515 235535 . ? . description=trf chr10 . repeat_region 235515 235535 . ? . description=dust chr10 . repeat_region 235572 235600 . ? . description=trf chr10 ensembl protein_coding_gene 234602 235128 . + . ID=Thaps263630;biotype=protein_coding;description=Probable methionyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C932];external_name=MTS;logic_name=jgi_thaps3 chr10 ensembl transcript 234602 235128 . + . ID=Thaps263630;Parent=Thaps263630;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 234602 235128 . + 0 ID=Thaps263630;Parent=Thaps263630;rank=1 chr10 . exon 234602 235128 . + . ID=Thaps263630.1;Parent=Thaps263630;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 229486 230231 . + . ID=Thaps36350;biotype=protein_coding;description=ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C929];external_name=CLPP;logic_name=jgi_thaps3 chr10 ensembl transcript 229486 230231 . + . ID=Thaps36350;Parent=Thaps36350;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 229486 229544 . + 0 ID=Thaps36350;Parent=Thaps36350;rank=1 chr10 . exon 229486 229544 . + . ID=Thaps36350.1;Parent=Thaps36350;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 229685 230231 . + 0 ID=Thaps36350;Parent=Thaps36350;rank=2 chr10 . exon 229685 230231 . + . ID=Thaps36350.2;Parent=Thaps36350;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 231778 232620 . - . ID=Thaps36431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C931];external_name=Thaps36431;logic_name=jgi_thaps3 chr10 ensembl transcript 231778 232620 . - . ID=Thaps36431;Parent=Thaps36431;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 231778 232350 . - 0 ID=Thaps36431;Parent=Thaps36431;rank=2 chr10 . exon 231778 232350 . - . ID=Thaps36431.2;Parent=Thaps36431;constitutive=1;rank=2 chr10 . CDS 232399 232620 . - 0 ID=Thaps36431;Parent=Thaps36431;rank=1 chr10 . exon 232399 232620 . - . ID=Thaps36431.1;Parent=Thaps36431;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 237204 238733 . - . ID=Thaps36434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C934];external_name=Thaps36434;logic_name=jgi_thaps3 chr10 ensembl transcript 237204 238733 . - . ID=Thaps36434;Parent=Thaps36434;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 237204 238226 . - 0 ID=Thaps36434;Parent=Thaps36434;rank=2 chr10 . exon 237204 238226 . - . ID=Thaps36434.2;Parent=Thaps36434;constitutive=1;rank=2 chr10 . CDS 238278 238733 . - 0 ID=Thaps36434;Parent=Thaps36434;rank=1 chr10 . exon 238278 238733 . - . ID=Thaps36434.1;Parent=Thaps36434;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 235887 237088 . + . ID=Thaps656;biotype=protein_coding;description=Glutathione s-transferase [Source:UniProtKB/TrEMBL%3BAcc:B8C933];external_name=Thaps656;logic_name=jgi_thaps3 chr10 ensembl transcript 235887 237088 . + . ID=Thaps656;Parent=Thaps656;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 235887 235918 . + 0 ID=Thaps656;Parent=Thaps656;rank=1 chr10 . exon 235887 235918 . + . ID=Thaps656.1;Parent=Thaps656;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 235992 236077 . + 0 ID=Thaps656;Parent=Thaps656;rank=2 chr10 . exon 235992 236077 . + . ID=Thaps656.2;Parent=Thaps656;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 236169 236318 . + 0 ID=Thaps656;Parent=Thaps656;rank=3 chr10 . exon 236169 236318 . + . ID=Thaps656.3;Parent=Thaps656;constitutive=1;rank=3 chr10 . CDS 236388 237088 . + 0 ID=Thaps656;Parent=Thaps656;rank=4 chr10 . exon 236388 237088 . + . ID=Thaps656.4;Parent=Thaps656;constitutive=1;ensembl_end_phase=2;rank=4 chr10 ensembl protein_coding_gene 230588 231479 . + . ID=Thaps8295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C930];external_name=Thaps8295;logic_name=jgi_thaps3 chr10 ensembl transcript 230588 231479 . + . ID=Thaps8295;Parent=Thaps8295;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 230588 231197 . + 0 ID=Thaps8295;Parent=Thaps8295;rank=1 chr10 . exon 230588 231197 . + . ID=Thaps8295.1;Parent=Thaps8295;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 231295 231479 . + 0 ID=Thaps8295;Parent=Thaps8295;rank=2 chr10 . exon 231295 231479 . + . ID=Thaps8295.2;Parent=Thaps8295;constitutive=1;ensembl_end_phase=2;rank=2 chr10 ensembl tRNA_gene 242157 242271 . - . ID=EPrTPOG00000000023;biotype=tRNA;description=tRNA-Val for anticodon AAC [Source:TRNASCAN_SE%3BAcc:tRNA-Val];external_name=tRNA-Val;logic_name=ncrna_eg chr10 ensembl transcript 242157 242271 . - . ID=EPrTPOT00000000025;Parent=EPrTPOG00000000023;biotype=tRNA;logic_name=ncrna_eg chr10 . exon 242157 242271 . - . ID=EPrTPOE00000000023;Parent=EPrTPOT00000000025;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 240268 241806 . + . ID=Thaps24123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C935];external_name=Thaps24123;logic_name=jgi_thaps3 chr10 ensembl transcript 240268 241806 . + . ID=Thaps24123;Parent=Thaps24123;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 240268 241806 . + 0 ID=Thaps24123;Parent=Thaps24123;rank=1 chr10 . exon 240268 241806 . + . ID=Thaps24123.1;Parent=Thaps24123;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 244357 246825 . - . ID=Thaps8301;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C936];external_name=Thaps8301;logic_name=jgi_thaps3 chr10 ensembl transcript 244357 246825 . - . ID=Thaps8301;Parent=Thaps8301;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 244357 246825 . - 0 ID=Thaps8301;Parent=Thaps8301;rank=1 chr10 . exon 244357 246825 . - . ID=Thaps8301.1;Parent=Thaps8301;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 247395 248576 . + . ID=Thaps8302;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C937];external_name=Thaps8302;logic_name=jgi_thaps3 chr10 ensembl transcript 247395 248576 . + . ID=Thaps8302;Parent=Thaps8302;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 247395 248576 . + 0 ID=Thaps8302;Parent=Thaps8302;rank=1 chr10 . exon 247395 248576 . + . ID=Thaps8302.1;Parent=Thaps8302;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 248640 250046 . - . ID=Thaps8303;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C938];external_name=Thaps8303;logic_name=jgi_thaps3 chr10 ensembl transcript 248640 250046 . - . ID=Thaps8303;Parent=Thaps8303;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 248640 250046 . - 0 ID=Thaps8303;Parent=Thaps8303;rank=1 chr10 . exon 248640 250046 . - . ID=Thaps8303.1;Parent=Thaps8303;constitutive=1;rank=1 chr10 . repeat_region 252808 252819 . ? . description=dust chr10 . repeat_region 254608 254635 . ? . description=dust chr10 . repeat_region 256311 256350 . ? . description=trf chr10 . biological_region 257886 257887 0.999 + . logic_name=eponine chr10 ensembl protein_coding_gene 253906 255147 . - . ID=Thaps24124;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C941];external_name=Thaps24124;logic_name=jgi_thaps3 chr10 ensembl transcript 253906 255147 . - . ID=Thaps24124;Parent=Thaps24124;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 253906 255147 . - 0 ID=Thaps24124;Parent=Thaps24124;rank=1 chr10 . exon 253906 255147 . - . ID=Thaps24124.1;Parent=Thaps24124;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 252074 252610 . + . ID=Thaps36490;biotype=protein_coding;description=AP17%2C clathrin adaptor complex AP2 small chain [Source:UniProtKB/TrEMBL%3BAcc:B8C940];external_name=APS2;logic_name=jgi_thaps3 chr10 ensembl transcript 252074 252610 . + . ID=Thaps36490;Parent=Thaps36490;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 252074 252133 . + 0 ID=Thaps36490;Parent=Thaps36490;rank=1 chr10 . exon 252074 252133 . + . ID=Thaps36490.1;Parent=Thaps36490;constitutive=1;rank=1 chr10 . CDS 252150 252165 . + 0 ID=Thaps36490;Parent=Thaps36490;rank=2 chr10 . exon 252150 252165 . + . ID=Thaps36490.2;Parent=Thaps36490;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 252258 252610 . + 0 ID=Thaps36490;Parent=Thaps36490;rank=3 chr10 . exon 252258 252610 . + . ID=Thaps36490.3;Parent=Thaps36490;constitutive=1;ensembl_end_phase=2;rank=3 chr10 ensembl protein_coding_gene 255674 256540 . + . ID=Thaps36527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C942];external_name=Thaps36527;logic_name=jgi_thaps3 chr10 ensembl transcript 255674 256540 . + . ID=Thaps36527;Parent=Thaps36527;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 255674 256181 . + 0 ID=Thaps36527;Parent=Thaps36527;rank=1 chr10 . exon 255674 256181 . + . ID=Thaps36527.1;Parent=Thaps36527;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 256374 256540 . + 0 ID=Thaps36527;Parent=Thaps36527;rank=2 chr10 . exon 256374 256540 . + . ID=Thaps36527.2;Parent=Thaps36527;constitutive=1;ensembl_end_phase=2;rank=2 chr10 ensembl protein_coding_gene 250378 251253 . + . ID=Thaps8304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C939];external_name=Thaps8304;logic_name=jgi_thaps3 chr10 ensembl transcript 250378 251253 . + . ID=Thaps8304;Parent=Thaps8304;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 250378 251253 . + 0 ID=Thaps8304;Parent=Thaps8304;rank=1 chr10 . exon 250378 251253 . + . ID=Thaps8304.1;Parent=Thaps8304;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 256929 258071 . - . ID=Thaps8308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C943];external_name=Thaps8308;logic_name=jgi_thaps3 chr10 ensembl transcript 256929 258071 . - . ID=Thaps8308;Parent=Thaps8308;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 256929 257185 . - 0 ID=Thaps8308;Parent=Thaps8308;rank=2 chr10 . exon 256929 257185 . - . ID=Thaps8308.2;Parent=Thaps8308;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 257264 258071 . - 0 ID=Thaps8308;Parent=Thaps8308;rank=1 chr10 . exon 257264 258071 . - . ID=Thaps8308.1;Parent=Thaps8308;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 258476 259613 . - . ID=Thaps8309;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C944];external_name=Thaps8309;logic_name=jgi_thaps3 chr10 ensembl transcript 258476 259613 . - . ID=Thaps8309;Parent=Thaps8309;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 258476 258835 . - 0 ID=Thaps8309;Parent=Thaps8309;rank=2 chr10 . exon 258476 258835 . - . ID=Thaps8309.2;Parent=Thaps8309;constitutive=1;rank=2 chr10 . CDS 258930 259613 . - 0 ID=Thaps8309;Parent=Thaps8309;rank=1 chr10 . exon 258930 259613 . - . ID=Thaps8309.1;Parent=Thaps8309;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 260473 263121 . + . ID=Thaps24125;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C945];external_name=Thaps24125;logic_name=jgi_thaps3 chr10 ensembl transcript 260473 263121 . + . ID=Thaps24125;Parent=Thaps24125;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 260473 263121 . + 0 ID=Thaps24125;Parent=Thaps24125;rank=1 chr10 . exon 260473 263121 . + . ID=Thaps24125.1;Parent=Thaps24125;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 264762 265685 . + . ID=Thaps24126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C947];external_name=Thaps24126;logic_name=jgi_thaps3 chr10 ensembl transcript 264762 265685 . + . ID=Thaps24126;Parent=Thaps24126;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 264762 265685 . + 0 ID=Thaps24126;Parent=Thaps24126;rank=1 chr10 . exon 264762 265685 . + . ID=Thaps24126.1;Parent=Thaps24126;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 265917 267885 . - . ID=Thaps24127;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C948];external_name=Thaps24127;logic_name=jgi_thaps3 chr10 ensembl transcript 265917 267885 . - . ID=Thaps24127;Parent=Thaps24127;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 265917 266269 . - 0 ID=Thaps24127;Parent=Thaps24127;rank=4 chr10 . exon 265917 266269 . - . ID=Thaps24127.4;Parent=Thaps24127;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 266350 266398 . - 0 ID=Thaps24127;Parent=Thaps24127;rank=3 chr10 . exon 266350 266398 . - . ID=Thaps24127.3;Parent=Thaps24127;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 266486 267549 . - 0 ID=Thaps24127;Parent=Thaps24127;rank=2 chr10 . exon 266486 267549 . - . ID=Thaps24127.2;Parent=Thaps24127;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 267750 267885 . - 0 ID=Thaps24127;Parent=Thaps24127;rank=1 chr10 . exon 267750 267885 . - . ID=Thaps24127.1;Parent=Thaps24127;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 263378 264295 . - . ID=Thaps8311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C946];external_name=Thaps8311;logic_name=jgi_thaps3 chr10 ensembl transcript 263378 264295 . - . ID=Thaps8311;Parent=Thaps8311;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 263378 264295 . - 0 ID=Thaps8311;Parent=Thaps8311;rank=1 chr10 . exon 263378 264295 . - . ID=Thaps8311.1;Parent=Thaps8311;constitutive=1;rank=1 chr10 . repeat_region 269049 269087 . ? . description=dust chr10 . repeat_region 276956 277019 . ? . description=trf chr10 ensembl protein_coding_gene 272150 274471 . + . ID=Thaps24129;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C950];external_name=Thaps24129;logic_name=jgi_thaps3 chr10 ensembl transcript 272150 274471 . + . ID=Thaps24129;Parent=Thaps24129;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 272150 272579 . + 0 ID=Thaps24129;Parent=Thaps24129;rank=1 chr10 . exon 272150 272579 . + . ID=Thaps24129.1;Parent=Thaps24129;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 272600 272950 . + 0 ID=Thaps24129;Parent=Thaps24129;rank=2 chr10 . exon 272600 272950 . + . ID=Thaps24129.2;Parent=Thaps24129;constitutive=1;rank=2 chr10 . CDS 273040 273703 . + 0 ID=Thaps24129;Parent=Thaps24129;rank=3 chr10 . exon 273040 273703 . + . ID=Thaps24129.3;Parent=Thaps24129;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 273793 274471 . + 0 ID=Thaps24129;Parent=Thaps24129;rank=4 chr10 . exon 273793 274471 . + . ID=Thaps24129.4;Parent=Thaps24129;constitutive=1;ensembl_end_phase=1;rank=4 chr10 ensembl protein_coding_gene 278034 280577 . + . ID=Thaps24130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C952];external_name=Thaps24130;logic_name=jgi_thaps3 chr10 ensembl transcript 278034 280577 . + . ID=Thaps24130;Parent=Thaps24130;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 278034 280577 . + 0 ID=Thaps24130;Parent=Thaps24130;rank=1 chr10 . exon 278034 280577 . + . ID=Thaps24130.1;Parent=Thaps24130;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 269707 270803 . - . ID=Thaps36411;biotype=protein_coding;description=Probable protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C949];external_name=Thaps36411;logic_name=jgi_thaps3 chr10 ensembl transcript 269707 270803 . - . ID=Thaps36411;Parent=Thaps36411;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 269707 270411 . - 0 ID=Thaps36411;Parent=Thaps36411;rank=3 chr10 . exon 269707 270411 . - . ID=Thaps36411.3;Parent=Thaps36411;constitutive=1;rank=3 chr10 . CDS 270488 270685 . - 0 ID=Thaps36411;Parent=Thaps36411;rank=2 chr10 . exon 270488 270685 . - . ID=Thaps36411.2;Parent=Thaps36411;constitutive=1;rank=2 chr10 . CDS 270771 270803 . - 0 ID=Thaps36411;Parent=Thaps36411;rank=1 chr10 . exon 270771 270803 . - . ID=Thaps36411.1;Parent=Thaps36411;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 274744 275688 . - . ID=Thaps36441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C951];external_name=Thaps36441;logic_name=jgi_thaps3 chr10 ensembl transcript 274744 275688 . - . ID=Thaps36441;Parent=Thaps36441;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 274744 274945 . - 0 ID=Thaps36441;Parent=Thaps36441;rank=3 chr10 . exon 274744 274945 . - . ID=Thaps36441.3;Parent=Thaps36441;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 274994 275392 . - 0 ID=Thaps36441;Parent=Thaps36441;rank=2 chr10 . exon 274994 275392 . - . ID=Thaps36441.2;Parent=Thaps36441;constitutive=1;rank=2 chr10 . CDS 275480 275688 . - 0 ID=Thaps36441;Parent=Thaps36441;rank=1 chr10 . exon 275480 275688 . - . ID=Thaps36441.1;Parent=Thaps36441;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 285091 285937 . + . ID=Thaps24132;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C955];external_name=Thaps24132;logic_name=jgi_thaps3 chr10 ensembl transcript 285091 285937 . + . ID=Thaps24132;Parent=Thaps24132;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 285091 285210 . + 0 ID=Thaps24132;Parent=Thaps24132;rank=1 chr10 . exon 285091 285210 . + . ID=Thaps24132.1;Parent=Thaps24132;constitutive=1;rank=1 chr10 . CDS 285334 285643 . + 0 ID=Thaps24132;Parent=Thaps24132;rank=2 chr10 . exon 285334 285643 . + . ID=Thaps24132.2;Parent=Thaps24132;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 285717 285937 . + 0 ID=Thaps24132;Parent=Thaps24132;rank=3 chr10 . exon 285717 285937 . + . ID=Thaps24132.3;Parent=Thaps24132;constitutive=1;ensembl_end_phase=2;rank=3 chr10 ensembl protein_coding_gene 282241 283314 . - . ID=Thaps269487;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C954];external_name=Thaps269487;logic_name=jgi_thaps3 chr10 ensembl transcript 282241 283314 . - . ID=Thaps269487;Parent=Thaps269487;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 282241 283314 . - 0 ID=Thaps269487;Parent=Thaps269487;rank=1 chr10 . exon 282241 283314 . - . ID=Thaps269487.1;Parent=Thaps269487;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 281296 282198 . + . ID=Thaps36373;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C953];external_name=Thaps36373;logic_name=jgi_thaps3 chr10 ensembl transcript 281296 282198 . + . ID=Thaps36373;Parent=Thaps36373;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 281296 282198 . + 0 ID=Thaps36373;Parent=Thaps36373;rank=1 chr10 . exon 281296 282198 . + . ID=Thaps36373.1;Parent=Thaps36373;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 286368 286769 . - . ID=Thaps36502;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C956];external_name=Thaps36502;logic_name=jgi_thaps3 chr10 ensembl transcript 286368 286769 . - . ID=Thaps36502;Parent=Thaps36502;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 286368 286769 . - 0 ID=Thaps36502;Parent=Thaps36502;rank=1 chr10 . exon 286368 286769 . - . ID=Thaps36502.1;Parent=Thaps36502;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 287447 288473 . + . ID=Thaps8321;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C957];external_name=Thaps8321;logic_name=jgi_thaps3 chr10 ensembl transcript 287447 288473 . + . ID=Thaps8321;Parent=Thaps8321;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 287447 287872 . + 0 ID=Thaps8321;Parent=Thaps8321;rank=1 chr10 . exon 287447 287872 . + . ID=Thaps8321.1;Parent=Thaps8321;constitutive=1;rank=1 chr10 . CDS 287973 288473 . + 0 ID=Thaps8321;Parent=Thaps8321;rank=2 chr10 . exon 287973 288473 . + . ID=Thaps8321.2;Parent=Thaps8321;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 288825 290096 . - . ID=Thaps8322;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C958];external_name=Thaps8322;logic_name=jgi_thaps3 chr10 ensembl transcript 288825 290096 . - . ID=Thaps8322;Parent=Thaps8322;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 288825 290096 . - 0 ID=Thaps8322;Parent=Thaps8322;rank=1 chr10 . exon 288825 290096 . - . ID=Thaps8322.1;Parent=Thaps8322;constitutive=1;rank=1 chr10 . repeat_region 295735 295758 . ? . description=dust chr10 ensembl protein_coding_gene 290781 292034 . - . ID=Thaps24133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C959];external_name=Thaps24133;logic_name=jgi_thaps3 chr10 ensembl transcript 290781 292034 . - . ID=Thaps24133;Parent=Thaps24133;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 290781 292034 . - 0 ID=Thaps24133;Parent=Thaps24133;rank=1 chr10 . exon 290781 292034 . - . ID=Thaps24133.1;Parent=Thaps24133;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 297231 297827 . - . ID=Thaps24134;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C962];external_name=Thaps24134;logic_name=jgi_thaps3 chr10 ensembl transcript 297231 297827 . - . ID=Thaps24134;Parent=Thaps24134;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 297231 297827 . - 0 ID=Thaps24134;Parent=Thaps24134;rank=1 chr10 . exon 297231 297827 . - . ID=Thaps24134.1;Parent=Thaps24134;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 295771 296367 . + . ID=Thaps263637;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C961];external_name=Thaps263637;logic_name=jgi_thaps3 chr10 ensembl transcript 295771 296367 . + . ID=Thaps263637;Parent=Thaps263637;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 295771 296367 . + 0 ID=Thaps263637;Parent=Thaps263637;rank=1 chr10 . exon 295771 296367 . + . ID=Thaps263637.1;Parent=Thaps263637;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 292262 295177 . - . ID=Thaps8324;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C960];external_name=Thaps8324;logic_name=jgi_thaps3 chr10 ensembl transcript 292262 295177 . - . ID=Thaps8324;Parent=Thaps8324;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 292262 293197 . - 0 ID=Thaps8324;Parent=Thaps8324;rank=8 chr10 . exon 292262 293197 . - . ID=Thaps8324.8;Parent=Thaps8324;constitutive=1;rank=8 chr10 . CDS 293320 293608 . - 0 ID=Thaps8324;Parent=Thaps8324;rank=7 chr10 . exon 293320 293608 . - . ID=Thaps8324.7;Parent=Thaps8324;constitutive=1;ensembl_end_phase=1;rank=7 chr10 . CDS 293819 293916 . - 0 ID=Thaps8324;Parent=Thaps8324;rank=6 chr10 . exon 293819 293916 . - . ID=Thaps8324.6;Parent=Thaps8324;constitutive=1;ensembl_end_phase=2;rank=6 chr10 . CDS 293955 294063 . - 0 ID=Thaps8324;Parent=Thaps8324;rank=5 chr10 . exon 293955 294063 . - . ID=Thaps8324.5;Parent=Thaps8324;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 294172 294390 . - 0 ID=Thaps8324;Parent=Thaps8324;rank=4 chr10 . exon 294172 294390 . - . ID=Thaps8324.4;Parent=Thaps8324;constitutive=1;rank=4 chr10 . CDS 294452 294519 . - 0 ID=Thaps8324;Parent=Thaps8324;rank=3 chr10 . exon 294452 294519 . - . ID=Thaps8324.3;Parent=Thaps8324;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 294605 295036 . - 0 ID=Thaps8324;Parent=Thaps8324;rank=2 chr10 . exon 294605 295036 . - . ID=Thaps8324.2;Parent=Thaps8324;constitutive=1;rank=2 chr10 . CDS 295136 295177 . - 0 ID=Thaps8324;Parent=Thaps8324;rank=1 chr10 . exon 295136 295177 . - . ID=Thaps8324.1;Parent=Thaps8324;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 298426 299292 . - . ID=Thaps8327;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C963];external_name=Thaps8327;logic_name=jgi_thaps3 chr10 ensembl transcript 298426 299292 . - . ID=Thaps8327;Parent=Thaps8327;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 298426 299292 . - 0 ID=Thaps8327;Parent=Thaps8327;rank=1 chr10 . exon 298426 299292 . - . ID=Thaps8327.1;Parent=Thaps8327;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 300592 303788 . + . ID=Thaps36337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C964];external_name=Thaps36337;logic_name=jgi_thaps3 chr10 ensembl transcript 300592 303788 . + . ID=Thaps36337;Parent=Thaps36337;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 300592 300678 . + 0 ID=Thaps36337;Parent=Thaps36337;rank=1 chr10 . exon 300592 300678 . + . ID=Thaps36337.1;Parent=Thaps36337;constitutive=1;rank=1 chr10 . CDS 300766 301033 . + 0 ID=Thaps36337;Parent=Thaps36337;rank=2 chr10 . exon 300766 301033 . + . ID=Thaps36337.2;Parent=Thaps36337;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 301382 302088 . + 0 ID=Thaps36337;Parent=Thaps36337;rank=3 chr10 . exon 301382 302088 . + . ID=Thaps36337.3;Parent=Thaps36337;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 302158 302374 . + 0 ID=Thaps36337;Parent=Thaps36337;rank=4 chr10 . exon 302158 302374 . + . ID=Thaps36337.4;Parent=Thaps36337;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 302522 302740 . + 0 ID=Thaps36337;Parent=Thaps36337;rank=5 chr10 . exon 302522 302740 . + . ID=Thaps36337.5;Parent=Thaps36337;constitutive=1;rank=5 chr10 . CDS 303001 303494 . + 0 ID=Thaps36337;Parent=Thaps36337;rank=6 chr10 . exon 303001 303494 . + . ID=Thaps36337.6;Parent=Thaps36337;constitutive=1;ensembl_end_phase=2;rank=6 chr10 . CDS 303591 303788 . + 0 ID=Thaps36337;Parent=Thaps36337;rank=7 chr10 . exon 303591 303788 . + . ID=Thaps36337.7;Parent=Thaps36337;constitutive=1;rank=7 chr10 ensembl protein_coding_gene 305652 307277 . + . ID=Thaps8329;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C965];external_name=Thaps8329;logic_name=jgi_thaps3 chr10 ensembl transcript 305652 307277 . + . ID=Thaps8329;Parent=Thaps8329;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 305652 305912 . + 0 ID=Thaps8329;Parent=Thaps8329;rank=1 chr10 . exon 305652 305912 . + . ID=Thaps8329.1;Parent=Thaps8329;constitutive=1;rank=1 chr10 . CDS 306009 307018 . + 0 ID=Thaps8329;Parent=Thaps8329;rank=2 chr10 . exon 306009 307018 . + . ID=Thaps8329.2;Parent=Thaps8329;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 307142 307277 . + 0 ID=Thaps8329;Parent=Thaps8329;rank=3 chr10 . exon 307142 307277 . + . ID=Thaps8329.3;Parent=Thaps8329;constitutive=1;ensembl_end_phase=1;rank=3 chr10 ensembl protein_coding_gene 307744 308861 . + . ID=Thaps8330;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C966];external_name=Thaps8330;logic_name=jgi_thaps3 chr10 ensembl transcript 307744 308861 . + . ID=Thaps8330;Parent=Thaps8330;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 307744 307894 . + 0 ID=Thaps8330;Parent=Thaps8330;rank=1 chr10 . exon 307744 307894 . + . ID=Thaps8330.1;Parent=Thaps8330;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 307975 308861 . + 0 ID=Thaps8330;Parent=Thaps8330;rank=2 chr10 . exon 307975 308861 . + . ID=Thaps8330.2;Parent=Thaps8330;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . repeat_region 309782 309790 . ? . description=dust chr10 . repeat_region 310619 310653 . ? . description=trf chr10 ensembl protein_coding_gene 310205 312860 . - . ID=Thaps24137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C968];external_name=Thaps24137;logic_name=jgi_thaps3 chr10 ensembl transcript 310205 312860 . - . ID=Thaps24137;Parent=Thaps24137;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 310205 311662 . - 0 ID=Thaps24137;Parent=Thaps24137;rank=4 chr10 . exon 310205 311662 . - . ID=Thaps24137.4;Parent=Thaps24137;constitutive=1;rank=4 chr10 . CDS 311768 311822 . - 0 ID=Thaps24137;Parent=Thaps24137;rank=3 chr10 . exon 311768 311822 . - . ID=Thaps24137.3;Parent=Thaps24137;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 311862 312601 . - 0 ID=Thaps24137;Parent=Thaps24137;rank=2 chr10 . exon 311862 312601 . - . ID=Thaps24137.2;Parent=Thaps24137;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 312630 312860 . - 0 ID=Thaps24137;Parent=Thaps24137;rank=1 chr10 . exon 312630 312860 . - . ID=Thaps24137.1;Parent=Thaps24137;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 317530 318047 . - . ID=Thaps263640;biotype=protein_coding;description=RNA methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C971];external_name=Thaps263640;logic_name=jgi_thaps3 chr10 ensembl transcript 317530 318047 . - . ID=Thaps263640;Parent=Thaps263640;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 317530 317851 . - 0 ID=Thaps263640;Parent=Thaps263640;rank=2 chr10 . exon 317530 317851 . - . ID=Thaps263640.2;Parent=Thaps263640;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 317909 318047 . - 0 ID=Thaps263640;Parent=Thaps263640;rank=1 chr10 . exon 317909 318047 . - . ID=Thaps263640.1;Parent=Thaps263640;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 308960 309607 . - . ID=Thaps269490;biotype=protein_coding;description=Riboflavin kinase/FAD synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C967];external_name=Thaps269490;logic_name=jgi_thaps3 chr10 ensembl transcript 308960 309607 . - . ID=Thaps269490;Parent=Thaps269490;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 308960 309094 . - 0 ID=Thaps269490;Parent=Thaps269490;rank=3 chr10 . exon 308960 309094 . - . ID=Thaps269490.3;Parent=Thaps269490;constitutive=1;rank=3 chr10 . CDS 309197 309396 . - 0 ID=Thaps269490;Parent=Thaps269490;rank=2 chr10 . exon 309197 309396 . - . ID=Thaps269490.2;Parent=Thaps269490;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 309427 309607 . - 0 ID=Thaps269490;Parent=Thaps269490;rank=1 chr10 . exon 309427 309607 . - . ID=Thaps269490.1;Parent=Thaps269490;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 313100 314035 . + . ID=Thaps8333;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C969];external_name=Thaps8333;logic_name=jgi_thaps3 chr10 ensembl transcript 313100 314035 . + . ID=Thaps8333;Parent=Thaps8333;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 313100 314035 . + 0 ID=Thaps8333;Parent=Thaps8333;rank=1 chr10 . exon 313100 314035 . + . ID=Thaps8333.1;Parent=Thaps8333;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 314557 317481 . + . ID=Thaps8334;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C970];external_name=Thaps8334;logic_name=jgi_thaps3 chr10 ensembl transcript 314557 317481 . + . ID=Thaps8334;Parent=Thaps8334;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 314557 317481 . + 0 ID=Thaps8334;Parent=Thaps8334;rank=1 chr10 . exon 314557 317481 . + . ID=Thaps8334.1;Parent=Thaps8334;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 324308 325675 . + . ID=Thaps24140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C975];external_name=Thaps24140;logic_name=jgi_thaps3 chr10 ensembl transcript 324308 325675 . + . ID=Thaps24140;Parent=Thaps24140;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 324308 325675 . + 0 ID=Thaps24140;Parent=Thaps24140;rank=1 chr10 . exon 324308 325675 . + . ID=Thaps24140.1;Parent=Thaps24140;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 326912 339003 . + . ID=Thaps24141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C976];external_name=Thaps24141;logic_name=jgi_thaps3 chr10 ensembl transcript 326912 339003 . + . ID=Thaps24141;Parent=Thaps24141;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 326912 333169 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=1 chr10 . exon 326912 333169 . + . ID=Thaps24141.1;Parent=Thaps24141;constitutive=1;rank=1 chr10 . CDS 333250 333420 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=2 chr10 . CDS 333601 333680 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=3 chr10 . CDS 333766 334092 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=4 chr10 . CDS 334179 334209 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=5 chr10 . CDS 334302 334447 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=6 chr10 . CDS 334533 334718 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=7 chr10 . CDS 334812 335399 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=8 chr10 . CDS 335486 335903 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=9 chr10 . CDS 335980 339003 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=10 chr10 ensembl protein_coding_gene 321003 322923 . + . ID=Thaps263641;biotype=protein_coding;description=DNA end binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8C973];external_name=Thaps263641;logic_name=jgi_thaps3 chr10 ensembl transcript 321003 322923 . + . ID=Thaps263641;Parent=Thaps263641;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 321003 321105 . + 0 ID=Thaps263641;Parent=Thaps263641;rank=1 chr10 . exon 321003 321105 . + . ID=Thaps263641.1;Parent=Thaps263641;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 321211 321248 . + 0 ID=Thaps263641;Parent=Thaps263641;rank=2 chr10 . exon 321211 321248 . + . ID=Thaps263641.2;Parent=Thaps263641;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 321291 321888 . + 0 ID=Thaps263641;Parent=Thaps263641;rank=3 chr10 . exon 321291 321888 . + . ID=Thaps263641.3;Parent=Thaps263641;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 321973 322166 . + 0 ID=Thaps263641;Parent=Thaps263641;rank=4 chr10 . exon 321973 322166 . + . ID=Thaps263641.4;Parent=Thaps263641;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 322248 322705 . + 0 ID=Thaps263641;Parent=Thaps263641;rank=5 chr10 . exon 322248 322705 . + . ID=Thaps263641.5;Parent=Thaps263641;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . CDS 322751 322923 . + 0 ID=Thaps263641;Parent=Thaps263641;rank=6 chr10 . exon 322751 322923 . + . ID=Thaps263641.6;Parent=Thaps263641;constitutive=1;ensembl_end_phase=2;rank=6 chr10 ensembl protein_coding_gene 319337 320922 . + . ID=Thaps8336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C972];external_name=Thaps8336;logic_name=jgi_thaps3 chr10 ensembl transcript 319337 320922 . + . ID=Thaps8336;Parent=Thaps8336;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 319337 319880 . + 0 ID=Thaps8336;Parent=Thaps8336;rank=1 chr10 . exon 319337 319880 . + . ID=Thaps8336.1;Parent=Thaps8336;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 319990 320922 . + 0 ID=Thaps8336;Parent=Thaps8336;rank=2 chr10 . exon 319990 320922 . + . ID=Thaps8336.2;Parent=Thaps8336;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 323116 323943 . + . ID=Thaps8338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C974];external_name=Thaps8338;logic_name=jgi_thaps3 chr10 ensembl transcript 323116 323943 . + . ID=Thaps8338;Parent=Thaps8338;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 323116 323943 . + 0 ID=Thaps8338;Parent=Thaps8338;rank=1 chr10 . exon 323116 323943 . + . ID=Thaps8338.1;Parent=Thaps8338;constitutive=1;rank=1 chr10 . repeat_region 336993 337029 . ? . description=trf chr10 . exon 333250 333420 . + . ID=Thaps24141.2;Parent=Thaps24141;constitutive=1;rank=2 chr10 . exon 333601 333680 . + . ID=Thaps24141.3;Parent=Thaps24141;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . exon 333766 334092 . + . ID=Thaps24141.4;Parent=Thaps24141;constitutive=1;rank=4 chr10 . exon 334179 334209 . + . ID=Thaps24141.5;Parent=Thaps24141;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . exon 334302 334447 . + . ID=Thaps24141.6;Parent=Thaps24141;constitutive=1;ensembl_end_phase=2;rank=6 chr10 . exon 334533 334718 . + . ID=Thaps24141.7;Parent=Thaps24141;constitutive=1;rank=7 chr10 . exon 334812 335399 . + . ID=Thaps24141.8;Parent=Thaps24141;constitutive=1;rank=8 chr10 . exon 335486 335903 . + . ID=Thaps24141.9;Parent=Thaps24141;constitutive=1;ensembl_end_phase=1;rank=9 chr10 . exon 335980 339003 . + . ID=Thaps24141.10;Parent=Thaps24141;constitutive=1;rank=10 chr10 . repeat_region 343361 343439 . ? . description=dust chr10 ensembl protein_coding_gene 326912 339003 . + . ID=Thaps24141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C976];external_name=Thaps24141;logic_name=jgi_thaps3 chr10 ensembl transcript 326912 339003 . + . ID=Thaps24141;Parent=Thaps24141;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 326912 333169 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=1 chr10 . CDS 333250 333420 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=2 chr10 . CDS 333601 333680 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=3 chr10 . CDS 333766 334092 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=4 chr10 . CDS 334179 334209 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=5 chr10 . CDS 334302 334447 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=6 chr10 . CDS 334533 334718 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=7 chr10 . CDS 334812 335399 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=8 chr10 . CDS 335486 335903 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=9 chr10 . CDS 335980 339003 . + 0 ID=Thaps24141;Parent=Thaps24141;rank=10 chr10 ensembl protein_coding_gene 340236 342662 . - . ID=Thaps24142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C977];external_name=Thaps24142;logic_name=jgi_thaps3 chr10 ensembl transcript 340236 342662 . - . ID=Thaps24142;Parent=Thaps24142;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 340236 341069 . - 0 ID=Thaps24142;Parent=Thaps24142;rank=3 chr10 . exon 340236 341069 . - . ID=Thaps24142.3;Parent=Thaps24142;constitutive=1;rank=3 chr10 . CDS 341167 341903 . - 0 ID=Thaps24142;Parent=Thaps24142;rank=2 chr10 . exon 341167 341903 . - . ID=Thaps24142.2;Parent=Thaps24142;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 342245 342662 . - 0 ID=Thaps24142;Parent=Thaps24142;rank=1 chr10 . exon 342245 342662 . - . ID=Thaps24142.1;Parent=Thaps24142;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 343178 344551 . + . ID=Thaps263642;biotype=protein_coding;description=Chitooligosaccharide deacetylase [Source:UniProtKB/TrEMBL%3BAcc:B8C978];external_name=CDA1;logic_name=jgi_thaps3 chr10 ensembl transcript 343178 344551 . + . ID=Thaps263642;Parent=Thaps263642;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 343178 343364 . + 0 ID=Thaps263642;Parent=Thaps263642;rank=1 chr10 . exon 343178 343364 . + . ID=Thaps263642.1;Parent=Thaps263642;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 343681 343780 . + 0 ID=Thaps263642;Parent=Thaps263642;rank=2 chr10 . exon 343681 343780 . + . ID=Thaps263642.2;Parent=Thaps263642;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 343928 344551 . + 0 ID=Thaps263642;Parent=Thaps263642;rank=3 chr10 . exon 343928 344551 . + . ID=Thaps263642.3;Parent=Thaps263642;constitutive=1;rank=3 chr10 ensembl protein_coding_gene 344813 345601 . - . ID=Thaps263643;biotype=protein_coding;description=Tubby2 protein [Source:UniProtKB/TrEMBL%3BAcc:B8C979];external_name=Thaps263643;logic_name=jgi_thaps3 chr10 ensembl transcript 344813 345601 . - . ID=Thaps263643;Parent=Thaps263643;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 344813 345601 . - 0 ID=Thaps263643;Parent=Thaps263643;rank=1 chr10 . exon 344813 345601 . - . ID=Thaps263643.1;Parent=Thaps263643;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 347663 348514 . + . ID=Thaps8344;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C980];external_name=Thaps8344;logic_name=jgi_thaps3 chr10 ensembl transcript 347663 348514 . + . ID=Thaps8344;Parent=Thaps8344;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 347663 348514 . + 0 ID=Thaps8344;Parent=Thaps8344;rank=1 chr10 . exon 347663 348514 . + . ID=Thaps8344.1;Parent=Thaps8344;constitutive=1;rank=1 chr10 . repeat_region 348806 349154 . ? . description=trf chr10 ensembl protein_coding_gene 354035 355120 . - . ID=Thaps16039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C982];external_name=Thaps16039;logic_name=jgi_thaps3 chr10 ensembl transcript 354035 355120 . - . ID=Thaps16039;Parent=Thaps16039;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 354035 354447 . - 0 ID=Thaps16039;Parent=Thaps16039;rank=2 chr10 . exon 354035 354447 . - . ID=Thaps16039.2;Parent=Thaps16039;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 354520 355120 . - 0 ID=Thaps16039;Parent=Thaps16039;rank=1 chr10 . exon 354520 355120 . - . ID=Thaps16039.1;Parent=Thaps16039;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 350032 353872 . + . ID=Thaps263644;biotype=protein_coding;description=DNA topoisomerase 2 [Source:UniProtKB/TrEMBL%3BAcc:B8C981];external_name=TOPOII_2;logic_name=jgi_thaps3 chr10 ensembl transcript 350032 353872 . + . ID=Thaps263644;Parent=Thaps263644;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 350032 350116 . + 0 ID=Thaps263644;Parent=Thaps263644;rank=1 chr10 . exon 350032 350116 . + . ID=Thaps263644.1;Parent=Thaps263644;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 350153 350302 . + 0 ID=Thaps263644;Parent=Thaps263644;rank=2 chr10 . exon 350153 350302 . + . ID=Thaps263644.2;Parent=Thaps263644;constitutive=1;rank=2 chr10 . CDS 350363 351329 . + 0 ID=Thaps263644;Parent=Thaps263644;rank=3 chr10 . exon 350363 351329 . + . ID=Thaps263644.3;Parent=Thaps263644;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 351411 351489 . + 0 ID=Thaps263644;Parent=Thaps263644;rank=4 chr10 . exon 351411 351489 . + . ID=Thaps263644.4;Parent=Thaps263644;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 351505 351930 . + 0 ID=Thaps263644;Parent=Thaps263644;rank=5 chr10 . exon 351505 351930 . + . ID=Thaps263644.5;Parent=Thaps263644;constitutive=1;rank=5 chr10 . CDS 351949 353655 . + 0 ID=Thaps263644;Parent=Thaps263644;rank=6 chr10 . exon 351949 353655 . + . ID=Thaps263644.6;Parent=Thaps263644;constitutive=1;rank=6 chr10 . CDS 353747 353872 . + 0 ID=Thaps263644;Parent=Thaps263644;rank=7 chr10 . exon 353747 353872 . + . ID=Thaps263644.7;Parent=Thaps263644;constitutive=1;rank=7 chr10 ensembl protein_coding_gene 357427 357930 . - . ID=Thaps8347;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C983];external_name=Thaps8347;logic_name=jgi_thaps3 chr10 ensembl transcript 357427 357930 . - . ID=Thaps8347;Parent=Thaps8347;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 357427 357930 . - 0 ID=Thaps8347;Parent=Thaps8347;rank=1 chr10 . exon 357427 357930 . - . ID=Thaps8347.1;Parent=Thaps8347;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 366781 369676 . + . ID=Thaps24144;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C986];external_name=Thaps24144;logic_name=jgi_thaps3 chr10 ensembl transcript 366781 369676 . + . ID=Thaps24144;Parent=Thaps24144;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 366781 368866 . + 0 ID=Thaps24144;Parent=Thaps24144;rank=1 chr10 . exon 366781 368866 . + . ID=Thaps24144.1;Parent=Thaps24144;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 368927 369019 . + 0 ID=Thaps24144;Parent=Thaps24144;rank=2 chr10 . CDS 369158 369435 . + 0 ID=Thaps24144;Parent=Thaps24144;rank=3 chr10 . CDS 369524 369676 . + 0 ID=Thaps24144;Parent=Thaps24144;rank=4 chr10 ensembl protein_coding_gene 359228 361806 . + . ID=Thaps8348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C984];external_name=Thaps8348;logic_name=jgi_thaps3 chr10 ensembl transcript 359228 361806 . + . ID=Thaps8348;Parent=Thaps8348;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 359228 360985 . + 0 ID=Thaps8348;Parent=Thaps8348;rank=1 chr10 . exon 359228 360985 . + . ID=Thaps8348.1;Parent=Thaps8348;constitutive=1;rank=1 chr10 . CDS 361066 361108 . + 0 ID=Thaps8348;Parent=Thaps8348;rank=2 chr10 . exon 361066 361108 . + . ID=Thaps8348.2;Parent=Thaps8348;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 361256 361806 . + 0 ID=Thaps8348;Parent=Thaps8348;rank=3 chr10 . exon 361256 361806 . + . ID=Thaps8348.3;Parent=Thaps8348;constitutive=1;ensembl_end_phase=2;rank=3 chr10 ensembl protein_coding_gene 362456 363648 . - . ID=Thaps8349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C985];external_name=Thaps8349;logic_name=jgi_thaps3 chr10 ensembl transcript 362456 363648 . - . ID=Thaps8349;Parent=Thaps8349;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 362456 363057 . - 0 ID=Thaps8349;Parent=Thaps8349;rank=2 chr10 . exon 362456 363057 . - . ID=Thaps8349.2;Parent=Thaps8349;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 363114 363648 . - 0 ID=Thaps8349;Parent=Thaps8349;rank=1 chr10 . exon 363114 363648 . - . ID=Thaps8349.1;Parent=Thaps8349;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . repeat_region 370662 370692 . ? . description=trf chr10 . repeat_region 370662 370692 . ? . description=dust chr10 . repeat_region 371900 371931 . ? . description=trf chr10 ensembl protein_coding_gene 372955 373303 . + . ID=Thaps19913;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C987];external_name=Thaps19913;logic_name=jgi_thaps3 chr10 ensembl transcript 372955 373303 . + . ID=Thaps19913;Parent=Thaps19913;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 372955 373015 . + 0 ID=Thaps19913;Parent=Thaps19913;rank=1 chr10 . exon 372955 373015 . + . ID=Thaps19913.1;Parent=Thaps19913;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 373092 373303 . + 0 ID=Thaps19913;Parent=Thaps19913;rank=2 chr10 . exon 373092 373303 . + . ID=Thaps19913.2;Parent=Thaps19913;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . exon 368927 369019 . + . ID=Thaps24144.2;Parent=Thaps24144;constitutive=1;rank=2 chr10 . exon 369158 369435 . + . ID=Thaps24144.3;Parent=Thaps24144;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . exon 369524 369676 . + . ID=Thaps24144.4;Parent=Thaps24144;constitutive=1;rank=4 chr10 ensembl protein_coding_gene 375110 378337 . + . ID=Thaps24145;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C988];external_name=Thaps24145;logic_name=jgi_thaps3 chr10 ensembl transcript 375110 378337 . + . ID=Thaps24145;Parent=Thaps24145;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 375110 375807 . + 0 ID=Thaps24145;Parent=Thaps24145;rank=1 chr10 . exon 375110 375807 . + . ID=Thaps24145.1;Parent=Thaps24145;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 375900 376091 . + 0 ID=Thaps24145;Parent=Thaps24145;rank=2 chr10 . exon 375900 376091 . + . ID=Thaps24145.2;Parent=Thaps24145;constitutive=1;rank=2 chr10 . CDS 376152 376969 . + 0 ID=Thaps24145;Parent=Thaps24145;rank=3 chr10 . exon 376152 376969 . + . ID=Thaps24145.3;Parent=Thaps24145;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 377040 377593 . + 0 ID=Thaps24145;Parent=Thaps24145;rank=4 chr10 . exon 377040 377593 . + . ID=Thaps24145.4;Parent=Thaps24145;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 377677 377878 . + 0 ID=Thaps24145;Parent=Thaps24145;rank=5 chr10 . exon 377677 377878 . + . ID=Thaps24145.5;Parent=Thaps24145;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 377958 378337 . + 0 ID=Thaps24145;Parent=Thaps24145;rank=6 chr10 . exon 377958 378337 . + . ID=Thaps24145.6;Parent=Thaps24145;constitutive=1;ensembl_end_phase=2;rank=6 chr10 ensembl protein_coding_gene 382922 385318 . + . ID=Thaps24146;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C992];external_name=Thaps24146;logic_name=jgi_thaps3 chr10 ensembl transcript 382922 385318 . + . ID=Thaps24146;Parent=Thaps24146;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 382922 384138 . + 0 ID=Thaps24146;Parent=Thaps24146;rank=1 chr10 . exon 382922 384138 . + . ID=Thaps24146.1;Parent=Thaps24146;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 384286 385318 . + 0 ID=Thaps24146;Parent=Thaps24146;rank=2 chr10 . exon 384286 385318 . + . ID=Thaps24146.2;Parent=Thaps24146;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 386160 386534 . + . ID=Thaps36330;biotype=protein_coding;description=Probable dna-directed RNA polymerase II 13.6 kDa polypeptide [Source:UniProtKB/TrEMBL%3BAcc:B8C993];external_name=RPBY;logic_name=jgi_thaps3 chr10 ensembl transcript 386160 386534 . + . ID=Thaps36330;Parent=Thaps36330;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 386160 386534 . + 0 ID=Thaps36330;Parent=Thaps36330;rank=1 chr10 . exon 386160 386534 . + . ID=Thaps36330.1;Parent=Thaps36330;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 386897 387846 . - . ID=Thaps36476;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C994];external_name=Thaps36476;logic_name=jgi_thaps3 chr10 ensembl transcript 386897 387846 . - . ID=Thaps36476;Parent=Thaps36476;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 386897 387254 . - 0 ID=Thaps36476;Parent=Thaps36476;rank=4 chr10 . exon 386897 387254 . - . ID=Thaps36476.4;Parent=Thaps36476;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 387327 387385 . - 0 ID=Thaps36476;Parent=Thaps36476;rank=3 chr10 . exon 387327 387385 . - . ID=Thaps36476.3;Parent=Thaps36476;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 387471 387612 . - 0 ID=Thaps36476;Parent=Thaps36476;rank=2 chr10 . exon 387471 387612 . - . ID=Thaps36476.2;Parent=Thaps36476;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 387713 387846 . - 0 ID=Thaps36476;Parent=Thaps36476;rank=1 chr10 . exon 387713 387846 . - . ID=Thaps36476.1;Parent=Thaps36476;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 378762 379616 . - . ID=Thaps8353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C989];external_name=Thaps8353;logic_name=jgi_thaps3 chr10 ensembl transcript 378762 379616 . - . ID=Thaps8353;Parent=Thaps8353;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 378762 379616 . - 0 ID=Thaps8353;Parent=Thaps8353;rank=1 chr10 . exon 378762 379616 . - . ID=Thaps8353.1;Parent=Thaps8353;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 380263 380733 . + . ID=Thaps8354;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C990];external_name=Thaps8354;logic_name=jgi_thaps3 chr10 ensembl transcript 380263 380733 . + . ID=Thaps8354;Parent=Thaps8354;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 380263 380733 . + 0 ID=Thaps8354;Parent=Thaps8354;rank=1 chr10 . exon 380263 380733 . + . ID=Thaps8354.1;Parent=Thaps8354;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 380976 381571 . - . ID=Thaps8355;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C991];external_name=Thaps8355;logic_name=jgi_thaps3 chr10 ensembl transcript 380976 381571 . - . ID=Thaps8355;Parent=Thaps8355;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 380976 381136 . - 0 ID=Thaps8355;Parent=Thaps8355;rank=2 chr10 . exon 380976 381136 . - . ID=Thaps8355.2;Parent=Thaps8355;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 381370 381571 . - 0 ID=Thaps8355;Parent=Thaps8355;rank=1 chr10 . exon 381370 381571 . - . ID=Thaps8355.1;Parent=Thaps8355;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . repeat_region 393493 393546 . ? . description=trf chr10 ensembl protein_coding_gene 393547 394506 . - . ID=Thaps24149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C997];external_name=Thaps24149;logic_name=jgi_thaps3 chr10 ensembl transcript 393547 394506 . - . ID=Thaps24149;Parent=Thaps24149;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 393547 394506 . - 0 ID=Thaps24149;Parent=Thaps24149;rank=1 chr10 . exon 393547 394506 . - . ID=Thaps24149.1;Parent=Thaps24149;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 394935 396389 . + . ID=Thaps24150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C998];external_name=Thaps24150;logic_name=jgi_thaps3 chr10 ensembl transcript 394935 396389 . + . ID=Thaps24150;Parent=Thaps24150;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 394935 396389 . + 0 ID=Thaps24150;Parent=Thaps24150;rank=1 chr10 . exon 394935 396389 . + . ID=Thaps24150.1;Parent=Thaps24150;constitutive=1;rank=1 chr10 ensembl gene 397288 399229 . + . ID=Thaps263650;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr10 ensembl transcript 397288 399229 . + . ID=Thaps263650;Parent=Thaps263650;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr10 . exon 397288 397486 . + . ID=Thaps263650.1;Parent=Thaps263650;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . exon 397572 398057 . + . ID=Thaps263650.2;Parent=Thaps263650;constitutive=1;rank=2 chr10 . exon 398209 398310 . + . ID=Thaps263650.3;Parent=Thaps263650;constitutive=1;rank=3 chr10 . exon 398390 398577 . + . ID=Thaps263650.4;Parent=Thaps263650;constitutive=1;ensembl_end_phase=2;rank=4 chr10 ensembl protein_coding_gene 388611 390267 . - . ID=Thaps41829;biotype=protein_coding;description=Translation elongation factor alpha [Source:UniProtKB/TrEMBL%3BAcc:B8C995];external_name=Thaps41829;logic_name=jgi_thaps3 chr10 ensembl transcript 388611 390267 . - . ID=Thaps41829;Parent=Thaps41829;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 388611 389920 . - 0 ID=Thaps41829;Parent=Thaps41829;rank=2 chr10 . exon 388611 389920 . - . ID=Thaps41829.2;Parent=Thaps41829;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 390216 390267 . - 0 ID=Thaps41829;Parent=Thaps41829;rank=1 chr10 . exon 390216 390267 . - . ID=Thaps41829.1;Parent=Thaps41829;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 392097 393278 . + . ID=Thaps8360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C996];external_name=Thaps8360;logic_name=jgi_thaps3 chr10 ensembl transcript 392097 393278 . + . ID=Thaps8360;Parent=Thaps8360;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 392097 392266 . + 0 ID=Thaps8360;Parent=Thaps8360;rank=1 chr10 . exon 392097 392266 . + . ID=Thaps8360.1;Parent=Thaps8360;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 392427 392742 . + 0 ID=Thaps8360;Parent=Thaps8360;rank=2 chr10 . exon 392427 392742 . + . ID=Thaps8360.2;Parent=Thaps8360;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 392848 393039 . + 0 ID=Thaps8360;Parent=Thaps8360;rank=3 chr10 . exon 392848 393039 . + . ID=Thaps8360.3;Parent=Thaps8360;constitutive=1;rank=3 chr10 . CDS 393120 393278 . + 0 ID=Thaps8360;Parent=Thaps8360;rank=4 chr10 . exon 393120 393278 . + . ID=Thaps8360.4;Parent=Thaps8360;constitutive=1;rank=4 chr10 . exon 398645 398873 . + . ID=Thaps263650.5;Parent=Thaps263650;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . exon 398956 399063 . + . ID=Thaps263650.6;Parent=Thaps263650;constitutive=1;rank=6 chr10 . exon 399165 399229 . + . ID=Thaps263650.7;Parent=Thaps263650;constitutive=1;ensembl_end_phase=2;rank=7 chr10 ensembl protein_coding_gene 400163 402257 . + . ID=Thaps269495;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C999];external_name=Thaps269495;logic_name=jgi_thaps3 chr10 ensembl transcript 400163 402257 . + . ID=Thaps269495;Parent=Thaps269495;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 400163 400826 . + 0 ID=Thaps269495;Parent=Thaps269495;rank=1 chr10 . exon 400163 400826 . + . ID=Thaps269495.1;Parent=Thaps269495;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 400926 401259 . + 0 ID=Thaps269495;Parent=Thaps269495;rank=2 chr10 . exon 400926 401259 . + . ID=Thaps269495.2;Parent=Thaps269495;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 401344 401554 . + 0 ID=Thaps269495;Parent=Thaps269495;rank=3 chr10 . exon 401344 401554 . + . ID=Thaps269495.3;Parent=Thaps269495;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 401785 401790 . + 0 ID=Thaps269495;Parent=Thaps269495;rank=4 chr10 . exon 401785 401790 . + . ID=Thaps269495.4;Parent=Thaps269495;constitutive=1;rank=4 chr10 . CDS 401931 402257 . + 0 ID=Thaps269495;Parent=Thaps269495;rank=5 chr10 . exon 401931 402257 . + . ID=Thaps269495.5;Parent=Thaps269495;constitutive=1;rank=5 chr10 ensembl protein_coding_gene 406102 408854 . + . ID=Thaps269496;biotype=protein_coding;description=Putative uncharacterized protein ZFP16 [Source:UniProtKB/TrEMBL%3BAcc:B8C9A0];external_name=ZFP16;logic_name=jgi_thaps3 chr10 ensembl transcript 406102 408854 . + . ID=Thaps269496;Parent=Thaps269496;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 406102 406561 . + 0 ID=Thaps269496;Parent=Thaps269496;rank=1 chr10 . exon 406102 406561 . + . ID=Thaps269496.1;Parent=Thaps269496;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 406637 407277 . + 0 ID=Thaps269496;Parent=Thaps269496;rank=2 chr10 . exon 406637 407277 . + . ID=Thaps269496.2;Parent=Thaps269496;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 407358 408854 . + 0 ID=Thaps269496;Parent=Thaps269496;rank=3 chr10 . exon 407358 408854 . + . ID=Thaps269496.3;Parent=Thaps269496;constitutive=1;rank=3 chr10 . repeat_region 414484 414562 . ? . description=dust chr10 ensembl protein_coding_gene 409992 413459 . + . ID=Thaps263653;biotype=protein_coding;description=Cation transporting ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8C9A1];external_name=Thaps263653;logic_name=jgi_thaps3 chr10 ensembl transcript 409992 413459 . + . ID=Thaps263653;Parent=Thaps263653;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 409992 410331 . + 0 ID=Thaps263653;Parent=Thaps263653;rank=1 chr10 . exon 409992 410331 . + . ID=Thaps263653.1;Parent=Thaps263653;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 410374 410477 . + 0 ID=Thaps263653;Parent=Thaps263653;rank=2 chr10 . exon 410374 410477 . + . ID=Thaps263653.2;Parent=Thaps263653;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 410511 410664 . + 0 ID=Thaps263653;Parent=Thaps263653;rank=3 chr10 . exon 410511 410664 . + . ID=Thaps263653.3;Parent=Thaps263653;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 410692 411306 . + 0 ID=Thaps263653;Parent=Thaps263653;rank=4 chr10 . exon 410692 411306 . + . ID=Thaps263653.4;Parent=Thaps263653;constitutive=1;rank=4 chr10 . CDS 411358 411434 . + 0 ID=Thaps263653;Parent=Thaps263653;rank=5 chr10 . exon 411358 411434 . + . ID=Thaps263653.5;Parent=Thaps263653;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . CDS 411474 412047 . + 0 ID=Thaps263653;Parent=Thaps263653;rank=6 chr10 . exon 411474 412047 . + . ID=Thaps263653.6;Parent=Thaps263653;constitutive=1;ensembl_end_phase=1;rank=6 chr10 . CDS 412165 412444 . + 0 ID=Thaps263653;Parent=Thaps263653;rank=7 chr10 . exon 412165 412444 . + . ID=Thaps263653.7;Parent=Thaps263653;constitutive=1;ensembl_end_phase=1;rank=7 chr10 . CDS 412526 413459 . + 0 ID=Thaps263653;Parent=Thaps263653;rank=8 chr10 . exon 412526 413459 . + . ID=Thaps263653.8;Parent=Thaps263653;constitutive=1;ensembl_end_phase=1;rank=8 chr10 ensembl protein_coding_gene 414928 417065 . + . ID=Thaps8365;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9A2];external_name=Thaps8365;logic_name=jgi_thaps3 chr10 ensembl transcript 414928 417065 . + . ID=Thaps8365;Parent=Thaps8365;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 414928 415304 . + 0 ID=Thaps8365;Parent=Thaps8365;rank=1 chr10 . exon 414928 415304 . + . ID=Thaps8365.1;Parent=Thaps8365;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 415643 417065 . + 0 ID=Thaps8365;Parent=Thaps8365;rank=2 chr10 . exon 415643 417065 . + . ID=Thaps8365.2;Parent=Thaps8365;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 417182 421262 . - . ID=Thaps8366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9A3];external_name=Thaps8366;logic_name=jgi_thaps3 chr10 ensembl transcript 417182 421262 . - . ID=Thaps8366;Parent=Thaps8366;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 417182 421188 . - 0 ID=Thaps8366;Parent=Thaps8366;rank=2 chr10 . exon 417182 421188 . - . ID=Thaps8366.2;Parent=Thaps8366;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 421208 421262 . - 0 ID=Thaps8366;Parent=Thaps8366;rank=1 chr10 . repeat_region 421146 421166 . ? . description=trf chr10 ensembl protein_coding_gene 421735 422997 . + . ID=Thaps24152;biotype=protein_coding;description=Arginine n-methyltransferase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9A4];external_name=Thaps24152;logic_name=jgi_thaps3 chr10 ensembl transcript 421735 422997 . + . ID=Thaps24152;Parent=Thaps24152;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 421735 422997 . + 0 ID=Thaps24152;Parent=Thaps24152;rank=1 chr10 . exon 421735 422997 . + . ID=Thaps24152.1;Parent=Thaps24152;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 423145 424308 . - . ID=Thaps24153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9A5];external_name=Thaps24153;logic_name=jgi_thaps3 chr10 ensembl transcript 423145 424308 . - . ID=Thaps24153;Parent=Thaps24153;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 423145 424308 . - 0 ID=Thaps24153;Parent=Thaps24153;rank=1 chr10 . exon 423145 424308 . - . ID=Thaps24153.1;Parent=Thaps24153;constitutive=1;rank=1 chr10 . exon 421208 421262 . - . ID=Thaps8366.1;Parent=Thaps8366;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 424916 425566 . - . ID=Thaps8369;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9A6];external_name=Thaps8369;logic_name=jgi_thaps3 chr10 ensembl transcript 424916 425566 . - . ID=Thaps8369;Parent=Thaps8369;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 424916 425566 . - 0 ID=Thaps8369;Parent=Thaps8369;rank=1 chr10 . exon 424916 425566 . - . ID=Thaps8369.1;Parent=Thaps8369;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 425803 427341 . + . ID=Thaps8370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9A7];external_name=Thaps8370;logic_name=jgi_thaps3 chr10 ensembl transcript 425803 427341 . + . ID=Thaps8370;Parent=Thaps8370;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 425803 427341 . + 0 ID=Thaps8370;Parent=Thaps8370;rank=1 chr10 . exon 425803 427341 . + . ID=Thaps8370.1;Parent=Thaps8370;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 427538 429643 . - . ID=Thaps8371;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9A8];external_name=Thaps8371;logic_name=jgi_thaps3 chr10 ensembl transcript 427538 429643 . - . ID=Thaps8371;Parent=Thaps8371;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 427538 428664 . - 0 ID=Thaps8371;Parent=Thaps8371;rank=2 chr10 . exon 427538 428664 . - . ID=Thaps8371.2;Parent=Thaps8371;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 428746 429643 . - 0 ID=Thaps8371;Parent=Thaps8371;rank=1 chr10 . repeat_region 437590 437598 . ? . description=dust chr10 ensembl protein_coding_gene 433371 434807 . - . ID=Thaps24155;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B0];external_name=Thaps24155;logic_name=jgi_thaps3 chr10 ensembl transcript 433371 434807 . - . ID=Thaps24155;Parent=Thaps24155;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 433371 434807 . - 0 ID=Thaps24155;Parent=Thaps24155;rank=1 chr10 . exon 433371 434807 . - . ID=Thaps24155.1;Parent=Thaps24155;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 437921 439123 . + . ID=Thaps263655;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B3];external_name=Thaps263655;logic_name=jgi_thaps3 chr10 ensembl transcript 437921 439123 . + . ID=Thaps263655;Parent=Thaps263655;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 437921 438173 . + 0 ID=Thaps263655;Parent=Thaps263655;rank=1 chr10 . exon 437921 438173 . + . ID=Thaps263655.1;Parent=Thaps263655;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 438190 438194 . + 0 ID=Thaps263655;Parent=Thaps263655;rank=2 chr10 . exon 438190 438194 . + . ID=Thaps263655.2;Parent=Thaps263655;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 438326 439123 . + 0 ID=Thaps263655;Parent=Thaps263655;rank=3 chr10 . exon 428746 429643 . - . ID=Thaps8371.1;Parent=Thaps8371;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 430247 431247 . + . ID=Thaps8372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9A9];external_name=Thaps8372;logic_name=jgi_thaps3 chr10 ensembl transcript 430247 431247 . + . ID=Thaps8372;Parent=Thaps8372;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 430247 430679 . + 0 ID=Thaps8372;Parent=Thaps8372;rank=1 chr10 . exon 430247 430679 . + . ID=Thaps8372.1;Parent=Thaps8372;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 430766 431247 . + 0 ID=Thaps8372;Parent=Thaps8372;rank=2 chr10 . exon 430766 431247 . + . ID=Thaps8372.2;Parent=Thaps8372;constitutive=1;ensembl_end_phase=2;rank=2 chr10 ensembl protein_coding_gene 435045 435601 . - . ID=Thaps8375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B1];external_name=Thaps8375;logic_name=jgi_thaps3 chr10 ensembl transcript 435045 435601 . - . ID=Thaps8375;Parent=Thaps8375;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 435045 435406 . - 0 ID=Thaps8375;Parent=Thaps8375;rank=3 chr10 . exon 435045 435406 . - . ID=Thaps8375.3;Parent=Thaps8375;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 435435 435478 . - 0 ID=Thaps8375;Parent=Thaps8375;rank=2 chr10 . exon 435435 435478 . - . ID=Thaps8375.2;Parent=Thaps8375;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 435558 435601 . - 0 ID=Thaps8375;Parent=Thaps8375;rank=1 chr10 . exon 435558 435601 . - . ID=Thaps8375.1;Parent=Thaps8375;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 436307 437290 . - . ID=Thaps8376;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B2];external_name=Thaps8376;logic_name=jgi_thaps3 chr10 ensembl transcript 436307 437290 . - . ID=Thaps8376;Parent=Thaps8376;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 436307 437290 . - 0 ID=Thaps8376;Parent=Thaps8376;rank=1 chr10 . exon 436307 437290 . - . ID=Thaps8376.1;Parent=Thaps8376;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 440408 443447 . - . ID=Thaps24157;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B4];external_name=Thaps24157;logic_name=jgi_thaps3 chr10 ensembl transcript 440408 443447 . - . ID=Thaps24157;Parent=Thaps24157;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 440408 440896 . - 0 ID=Thaps24157;Parent=Thaps24157;rank=5 chr10 . exon 440408 440896 . - . ID=Thaps24157.5;Parent=Thaps24157;constitutive=1;rank=5 chr10 . CDS 440992 442375 . - 0 ID=Thaps24157;Parent=Thaps24157;rank=4 chr10 . exon 440992 442375 . - . ID=Thaps24157.4;Parent=Thaps24157;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 442468 442571 . - 0 ID=Thaps24157;Parent=Thaps24157;rank=3 chr10 . exon 442468 442571 . - . ID=Thaps24157.3;Parent=Thaps24157;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 442612 442923 . - 0 ID=Thaps24157;Parent=Thaps24157;rank=2 chr10 . exon 442612 442923 . - . ID=Thaps24157.2;Parent=Thaps24157;constitutive=1;rank=2 chr10 . CDS 443013 443447 . - 0 ID=Thaps24157;Parent=Thaps24157;rank=1 chr10 . exon 443013 443447 . - . ID=Thaps24157.1;Parent=Thaps24157;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 445394 449325 . - . ID=Thaps24158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B5];external_name=Thaps24158;logic_name=jgi_thaps3 chr10 ensembl transcript 445394 449325 . - . ID=Thaps24158;Parent=Thaps24158;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 445394 445455 . - 0 ID=Thaps24158;Parent=Thaps24158;rank=5 chr10 . exon 445394 445455 . - . ID=Thaps24158.5;Parent=Thaps24158;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . CDS 445622 446450 . - 0 ID=Thaps24158;Parent=Thaps24158;rank=4 chr10 . exon 445622 446450 . - . ID=Thaps24158.4;Parent=Thaps24158;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 446526 447771 . - 0 ID=Thaps24158;Parent=Thaps24158;rank=3 chr10 . exon 446526 447771 . - . ID=Thaps24158.3;Parent=Thaps24158;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 448065 448831 . - 0 ID=Thaps24158;Parent=Thaps24158;rank=2 chr10 . exon 448065 448831 . - . ID=Thaps24158.2;Parent=Thaps24158;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 448930 449325 . - 0 ID=Thaps24158;Parent=Thaps24158;rank=1 chr10 . exon 438326 439123 . + . ID=Thaps263655.3;Parent=Thaps263655;constitutive=1;rank=3 chr10 . repeat_region 449625 449632 . ? . description=dust chr10 . repeat_region 449755 449799 . ? . description=dust chr10 . repeat_region 453513 453598 . ? . description=trf chr10 . repeat_region 453523 453615 . ? . description=trf chr10 . exon 448930 449325 . - . ID=Thaps24158.1;Parent=Thaps24158;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 450848 452560 . - . ID=Thaps24159;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B7];external_name=Thaps24159;logic_name=jgi_thaps3 chr10 ensembl transcript 450848 452560 . - . ID=Thaps24159;Parent=Thaps24159;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 450848 452560 . - 0 ID=Thaps24159;Parent=Thaps24159;rank=1 chr10 . exon 450848 452560 . - . ID=Thaps24159.1;Parent=Thaps24159;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 454820 455446 . - . ID=Thaps24160;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B9];external_name=Thaps24160;logic_name=jgi_thaps3 chr10 ensembl transcript 454820 455446 . - . ID=Thaps24160;Parent=Thaps24160;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 454820 455446 . - 0 ID=Thaps24160;Parent=Thaps24160;rank=1 chr10 . exon 454820 455446 . - . ID=Thaps24160.1;Parent=Thaps24160;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 449744 450775 . + . ID=Thaps8380;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B6];external_name=Thaps8380;logic_name=jgi_thaps3 chr10 ensembl transcript 449744 450775 . + . ID=Thaps8380;Parent=Thaps8380;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 449744 450775 . + 0 ID=Thaps8380;Parent=Thaps8380;rank=1 chr10 . exon 449744 450775 . + . ID=Thaps8380.1;Parent=Thaps8380;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 452985 453782 . + . ID=Thaps8382;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9B8];external_name=Thaps8382;logic_name=jgi_thaps3 chr10 ensembl transcript 452985 453782 . + . ID=Thaps8382;Parent=Thaps8382;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 452985 453782 . + 0 ID=Thaps8382;Parent=Thaps8382;rank=1 chr10 . exon 452985 453782 . + . ID=Thaps8382.1;Parent=Thaps8382;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 455719 459702 . + . ID=Thaps8384;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9C0];external_name=Thaps8384;logic_name=jgi_thaps3 chr10 ensembl transcript 455719 459702 . + . ID=Thaps8384;Parent=Thaps8384;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 455719 456915 . + 0 ID=Thaps8384;Parent=Thaps8384;rank=1 chr10 . exon 455719 456915 . + . ID=Thaps8384.1;Parent=Thaps8384;constitutive=1;rank=1 chr10 . CDS 456998 457087 . + 0 ID=Thaps8384;Parent=Thaps8384;rank=2 chr10 . exon 456998 457087 . + . ID=Thaps8384.2;Parent=Thaps8384;constitutive=1;rank=2 chr10 . CDS 457122 458017 . + 0 ID=Thaps8384;Parent=Thaps8384;rank=3 chr10 . exon 457122 458017 . + . ID=Thaps8384.3;Parent=Thaps8384;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 458070 459457 . + 0 ID=Thaps8384;Parent=Thaps8384;rank=4 chr10 . exon 458070 459457 . + . ID=Thaps8384.4;Parent=Thaps8384;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 459695 459702 . + 0 ID=Thaps8384;Parent=Thaps8384;rank=5 chr10 ensembl protein_coding_gene 467965 469236 . - . ID=Thaps24163;biotype=protein_coding;description=Phenylalanine-trna synthetase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9C5];external_name=Thaps24163;logic_name=jgi_thaps3 chr10 ensembl transcript 467965 469236 . - . ID=Thaps24163;Parent=Thaps24163;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 467965 469236 . - 0 ID=Thaps24163;Parent=Thaps24163;rank=1 chr10 . exon 467965 469236 . - . ID=Thaps24163.1;Parent=Thaps24163;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 460209 461372 . - . ID=Thaps263656;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9C1];external_name=Thaps263656;logic_name=jgi_thaps3 chr10 ensembl transcript 460209 461372 . - . ID=Thaps263656;Parent=Thaps263656;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 460209 460691 . - 0 ID=Thaps263656;Parent=Thaps263656;rank=2 chr10 . exon 460209 460691 . - . ID=Thaps263656.2;Parent=Thaps263656;constitutive=1;rank=2 chr10 . CDS 460819 461372 . - 0 ID=Thaps263656;Parent=Thaps263656;rank=1 chr10 . exon 460819 461372 . - . ID=Thaps263656.1;Parent=Thaps263656;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 466669 467466 . - . ID=Thaps263658;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9C4];external_name=Thaps263658;logic_name=jgi_thaps3 chr10 ensembl transcript 466669 467466 . - . ID=Thaps263658;Parent=Thaps263658;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 466669 466881 . - 0 ID=Thaps263658;Parent=Thaps263658;rank=3 chr10 . exon 466669 466881 . - . ID=Thaps263658.3;Parent=Thaps263658;constitutive=1;rank=3 chr10 . CDS 466987 467148 . - 0 ID=Thaps263658;Parent=Thaps263658;rank=2 chr10 . exon 466987 467148 . - . ID=Thaps263658.2;Parent=Thaps263658;constitutive=1;rank=2 chr10 . CDS 467389 467466 . - 0 ID=Thaps263658;Parent=Thaps263658;rank=1 chr10 . exon 467389 467466 . - . ID=Thaps263658.1;Parent=Thaps263658;constitutive=1;rank=1 chr10 . exon 459695 459702 . + . ID=Thaps8384.5;Parent=Thaps8384;constitutive=1;ensembl_end_phase=2;rank=5 chr10 ensembl protein_coding_gene 461770 463904 . - . ID=Thaps8386;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9C2];external_name=Thaps8386;logic_name=jgi_thaps3 chr10 ensembl transcript 461770 463904 . - . ID=Thaps8386;Parent=Thaps8386;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 461770 462263 . - 0 ID=Thaps8386;Parent=Thaps8386;rank=3 chr10 . exon 461770 462263 . - . ID=Thaps8386.3;Parent=Thaps8386;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 462345 462886 . - 0 ID=Thaps8386;Parent=Thaps8386;rank=2 chr10 . exon 462345 462886 . - . ID=Thaps8386.2;Parent=Thaps8386;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 462955 463904 . - 0 ID=Thaps8386;Parent=Thaps8386;rank=1 chr10 . exon 462955 463904 . - . ID=Thaps8386.1;Parent=Thaps8386;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 464225 465840 . + . ID=Thaps8387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9C3];external_name=Thaps8387;logic_name=jgi_thaps3 chr10 ensembl transcript 464225 465840 . + . ID=Thaps8387;Parent=Thaps8387;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 464225 464284 . + 0 ID=Thaps8387;Parent=Thaps8387;rank=1 chr10 . exon 464225 464284 . + . ID=Thaps8387.1;Parent=Thaps8387;constitutive=1;rank=1 chr10 . CDS 464551 465840 . + 0 ID=Thaps8387;Parent=Thaps8387;rank=2 chr10 . exon 464551 465840 . + . ID=Thaps8387.2;Parent=Thaps8387;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 476457 477008 . + . ID=Thaps24164;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9C9];external_name=Thaps24164;logic_name=jgi_thaps3 chr10 ensembl transcript 476457 477008 . + . ID=Thaps24164;Parent=Thaps24164;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 476457 477008 . + 0 ID=Thaps24164;Parent=Thaps24164;rank=1 chr10 . exon 476457 477008 . + . ID=Thaps24164.1;Parent=Thaps24164;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 470100 470709 . - . ID=Thaps263660;biotype=protein_coding;description=1-acyl-sn-glycerol-3-phosphate ACYLTRANSFERASE%2C lysophosphatidic acid acyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C9C6];external_name=LAT1_1;logic_name=jgi_thaps3 chr10 ensembl transcript 470100 470709 . - . ID=Thaps263660;Parent=Thaps263660;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 470100 470395 . - 0 ID=Thaps263660;Parent=Thaps263660;rank=2 chr10 . exon 470100 470395 . - . ID=Thaps263660.2;Parent=Thaps263660;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 470500 470709 . - 0 ID=Thaps263660;Parent=Thaps263660;rank=1 chr10 . exon 470500 470709 . - . ID=Thaps263660.1;Parent=Thaps263660;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 472048 473225 . + . ID=Thaps263661;biotype=protein_coding;description=Mitochondrial carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9C7];external_name=Thaps263661;logic_name=jgi_thaps3 chr10 ensembl transcript 472048 473225 . + . ID=Thaps263661;Parent=Thaps263661;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 472048 472132 . + 0 ID=Thaps263661;Parent=Thaps263661;rank=1 chr10 . exon 472048 472132 . + . ID=Thaps263661.1;Parent=Thaps263661;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 472202 472375 . + 0 ID=Thaps263661;Parent=Thaps263661;rank=2 chr10 . exon 472202 472375 . + . ID=Thaps263661.2;Parent=Thaps263661;constitutive=1;rank=2 chr10 . CDS 472391 472519 . + 0 ID=Thaps263661;Parent=Thaps263661;rank=3 chr10 . exon 472391 472519 . + . ID=Thaps263661.3;Parent=Thaps263661;constitutive=1;rank=3 chr10 . CDS 472640 472880 . + 0 ID=Thaps263661;Parent=Thaps263661;rank=4 chr10 . exon 472640 472880 . + . ID=Thaps263661.4;Parent=Thaps263661;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 473003 473225 . + 0 ID=Thaps263661;Parent=Thaps263661;rank=5 chr10 . exon 473003 473225 . + . ID=Thaps263661.5;Parent=Thaps263661;constitutive=1;ensembl_end_phase=1;rank=5 chr10 ensembl protein_coding_gene 473286 475656 . - . ID=Thaps661;biotype=protein_coding;description=Mg chelatase [Source:UniProtKB/TrEMBL%3BAcc:B8C9C8];external_name=Thaps661;logic_name=jgi_thaps3 chr10 ensembl transcript 473286 475656 . - . ID=Thaps661;Parent=Thaps661;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 473286 474049 . - 0 ID=Thaps661;Parent=Thaps661;rank=6 chr10 . exon 473286 474049 . - . ID=Thaps661.6;Parent=Thaps661;constitutive=1;ensembl_end_phase=2;rank=6 chr10 . CDS 474125 474164 . - 0 ID=Thaps661;Parent=Thaps661;rank=5 chr10 . exon 474125 474164 . - . ID=Thaps661.5;Parent=Thaps661;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 474239 474516 . - 0 ID=Thaps661;Parent=Thaps661;rank=4 chr10 . exon 474239 474516 . - . ID=Thaps661.4;Parent=Thaps661;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 474573 474588 . - 0 ID=Thaps661;Parent=Thaps661;rank=3 chr10 . exon 474573 474588 . - . ID=Thaps661.3;Parent=Thaps661;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 474608 475175 . - 0 ID=Thaps661;Parent=Thaps661;rank=2 chr10 . exon 474608 475175 . - . ID=Thaps661.2;Parent=Thaps661;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 475253 475656 . - 0 ID=Thaps661;Parent=Thaps661;rank=1 chr10 . exon 475253 475656 . - . ID=Thaps661.1;Parent=Thaps661;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . repeat_region 481497 481504 . ? . description=dust chr10 ensembl protein_coding_gene 479728 482406 . + . ID=Thaps24165;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9D0];external_name=Thaps24165;logic_name=jgi_thaps3 chr10 ensembl transcript 479728 482406 . + . ID=Thaps24165;Parent=Thaps24165;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 479728 482406 . + 0 ID=Thaps24165;Parent=Thaps24165;rank=1 chr10 . exon 479728 482406 . + . ID=Thaps24165.1;Parent=Thaps24165;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 485981 486753 . + . ID=Thaps36425;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9D2];external_name=Thaps36425;logic_name=jgi_thaps3 chr10 ensembl transcript 485981 486753 . + . ID=Thaps36425;Parent=Thaps36425;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 485981 486273 . + 0 ID=Thaps36425;Parent=Thaps36425;rank=1 chr10 . exon 485981 486273 . + . ID=Thaps36425.1;Parent=Thaps36425;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 486358 486577 . + 0 ID=Thaps36425;Parent=Thaps36425;rank=2 chr10 . exon 486358 486577 . + . ID=Thaps36425.2;Parent=Thaps36425;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 486655 486753 . + 0 ID=Thaps36425;Parent=Thaps36425;rank=3 chr10 . exon 486655 486753 . + . ID=Thaps36425.3;Parent=Thaps36425;constitutive=1;rank=3 chr10 ensembl protein_coding_gene 482474 483514 . - . ID=Thaps8395;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9D1];external_name=Thaps8395;logic_name=jgi_thaps3 chr10 ensembl transcript 482474 483514 . - . ID=Thaps8395;Parent=Thaps8395;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 482474 483514 . - 0 ID=Thaps8395;Parent=Thaps8395;rank=1 chr10 . exon 482474 483514 . - . ID=Thaps8395.1;Parent=Thaps8395;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 487492 487950 . - . ID=Thaps8397;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9D3];external_name=Thaps8397;logic_name=jgi_thaps3 chr10 ensembl transcript 487492 487950 . - . ID=Thaps8397;Parent=Thaps8397;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 487492 487950 . - 0 ID=Thaps8397;Parent=Thaps8397;rank=1 chr10 . exon 487492 487950 . - . ID=Thaps8397.1;Parent=Thaps8397;constitutive=1;rank=1 chr10 . repeat_region 494229 494254 . ? . description=trf chr10 . repeat_region 494230 494270 . ? . description=trf chr10 . repeat_region 494273 494293 . ? . description=trf chr10 ensembl protein_coding_gene 488768 489499 . - . ID=Thaps24167;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9D4];external_name=Thaps24167;logic_name=jgi_thaps3 chr10 ensembl transcript 488768 489499 . - . ID=Thaps24167;Parent=Thaps24167;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 488768 489499 . - 0 ID=Thaps24167;Parent=Thaps24167;rank=1 chr10 . exon 488768 489499 . - . ID=Thaps24167.1;Parent=Thaps24167;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 495233 499618 . - . ID=Thaps24171;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9D8];external_name=Thaps24171;logic_name=jgi_thaps3 chr10 ensembl transcript 495233 499618 . - . ID=Thaps24171;Parent=Thaps24171;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 495233 499618 . - 0 ID=Thaps24171;Parent=Thaps24171;rank=1 chr10 . exon 495233 499618 . - . ID=Thaps24171.1;Parent=Thaps24171;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 490821 492470 . + . ID=Thaps263663;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9D5];external_name=Thaps263663;logic_name=jgi_thaps3 chr10 ensembl transcript 490821 492470 . + . ID=Thaps263663;Parent=Thaps263663;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 490821 490989 . + 0 ID=Thaps263663;Parent=Thaps263663;rank=1 chr10 . exon 490821 490989 . + . ID=Thaps263663.1;Parent=Thaps263663;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 491005 491142 . + 0 ID=Thaps263663;Parent=Thaps263663;rank=2 chr10 . exon 491005 491142 . + . ID=Thaps263663.2;Parent=Thaps263663;constitutive=1;rank=2 chr10 . CDS 491227 491387 . + 0 ID=Thaps263663;Parent=Thaps263663;rank=3 chr10 . exon 491227 491387 . + . ID=Thaps263663.3;Parent=Thaps263663;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 491424 492134 . + 0 ID=Thaps263663;Parent=Thaps263663;rank=4 chr10 . exon 491424 492134 . + . ID=Thaps263663.4;Parent=Thaps263663;constitutive=1;rank=4 chr10 . CDS 492171 492470 . + 0 ID=Thaps263663;Parent=Thaps263663;rank=5 chr10 . exon 492171 492470 . + . ID=Thaps263663.5;Parent=Thaps263663;constitutive=1;rank=5 chr10 ensembl protein_coding_gene 493497 493735 . - . ID=Thaps263665;biotype=protein_coding;description=RT17%2C ribosomal protein 17 mitochondrial small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C9D7];external_name=RT17;logic_name=jgi_thaps3 chr10 ensembl transcript 493497 493735 . - . ID=Thaps263665;Parent=Thaps263665;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 493497 493735 . - 0 ID=Thaps263665;Parent=Thaps263665;rank=1 chr10 . exon 493497 493735 . - . ID=Thaps263665.1;Parent=Thaps263665;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 492590 493231 . + . ID=Thaps36553;biotype=protein_coding;description=Predicted proteinRBJ-like protein [Source:UniProtKB/TrEMBL%3BAcc:Q6IML4];external_name=RBJ;logic_name=jgi_thaps3 chr10 ensembl transcript 492590 493231 . + . ID=Thaps36553;Parent=Thaps36553;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 492590 493231 . + 0 ID=Thaps36553;Parent=Thaps36553;rank=1 chr10 . exon 492590 493231 . + . ID=Thaps36553.1;Parent=Thaps36553;constitutive=1;rank=1 chr10 . repeat_region 502391 502403 . ? . description=dust chr10 ensembl protein_coding_gene 499814 501299 . + . ID=Thaps24172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9D9];external_name=Thaps24172;logic_name=jgi_thaps3 chr10 ensembl transcript 499814 501299 . + . ID=Thaps24172;Parent=Thaps24172;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 499814 500322 . + 0 ID=Thaps24172;Parent=Thaps24172;rank=1 chr10 . exon 499814 500322 . + . ID=Thaps24172.1;Parent=Thaps24172;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 500423 501299 . + 0 ID=Thaps24172;Parent=Thaps24172;rank=2 chr10 . exon 500423 501299 . + . ID=Thaps24172.2;Parent=Thaps24172;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 503031 504562 . + . ID=Thaps269503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E0];external_name=Thaps269503;logic_name=jgi_thaps3 chr10 ensembl transcript 503031 504562 . + . ID=Thaps269503;Parent=Thaps269503;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 503031 503232 . + 0 ID=Thaps269503;Parent=Thaps269503;rank=1 chr10 . exon 503031 503232 . + . ID=Thaps269503.1;Parent=Thaps269503;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 503319 503743 . + 0 ID=Thaps269503;Parent=Thaps269503;rank=2 chr10 . exon 503319 503743 . + . ID=Thaps269503.2;Parent=Thaps269503;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 503834 503870 . + 0 ID=Thaps269503;Parent=Thaps269503;rank=3 chr10 . exon 503834 503870 . + . ID=Thaps269503.3;Parent=Thaps269503;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 503968 504034 . + 0 ID=Thaps269503;Parent=Thaps269503;rank=4 chr10 . exon 503968 504034 . + . ID=Thaps269503.4;Parent=Thaps269503;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 504119 504329 . + 0 ID=Thaps269503;Parent=Thaps269503;rank=5 chr10 . exon 504119 504329 . + . ID=Thaps269503.5;Parent=Thaps269503;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 504419 504562 . + 0 ID=Thaps269503;Parent=Thaps269503;rank=6 chr10 . exon 504419 504562 . + . ID=Thaps269503.6;Parent=Thaps269503;constitutive=1;rank=6 chr10 ensembl protein_coding_gene 505994 509636 . + . ID=Thaps8405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E1];external_name=Thaps8405;logic_name=jgi_thaps3 chr10 ensembl transcript 505994 509636 . + . ID=Thaps8405;Parent=Thaps8405;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 505994 506756 . + 0 ID=Thaps8405;Parent=Thaps8405;rank=1 chr10 . exon 505994 506756 . + . ID=Thaps8405.1;Parent=Thaps8405;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 507060 508048 . + 0 ID=Thaps8405;Parent=Thaps8405;rank=2 chr10 . exon 507060 508048 . + . ID=Thaps8405.2;Parent=Thaps8405;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 508132 508168 . + 0 ID=Thaps8405;Parent=Thaps8405;rank=3 chr10 . CDS 508258 508324 . + 0 ID=Thaps8405;Parent=Thaps8405;rank=4 chr10 . CDS 508415 509636 . + 0 ID=Thaps8405;Parent=Thaps8405;rank=5 chr10 ensembl protein_coding_gene 510357 511950 . - . ID=Thaps269504;biotype=protein_coding;description=Actin-related protein centractin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E2];external_name=ACT4;logic_name=jgi_thaps3 chr10 ensembl transcript 510357 511950 . - . ID=Thaps269504;Parent=Thaps269504;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 510357 510796 . - 0 ID=Thaps269504;Parent=Thaps269504;rank=4 chr10 . exon 510357 510796 . - . ID=Thaps269504.4;Parent=Thaps269504;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 510836 511259 . - 0 ID=Thaps269504;Parent=Thaps269504;rank=3 chr10 . exon 510836 511259 . - . ID=Thaps269504.3;Parent=Thaps269504;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 511497 511621 . - 0 ID=Thaps269504;Parent=Thaps269504;rank=2 chr10 . exon 511497 511621 . - . ID=Thaps269504.2;Parent=Thaps269504;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 511818 511950 . - 0 ID=Thaps269504;Parent=Thaps269504;rank=1 chr10 . exon 511818 511950 . - . ID=Thaps269504.1;Parent=Thaps269504;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . exon 508132 508168 . + . ID=Thaps8405.3;Parent=Thaps8405;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . exon 508258 508324 . + . ID=Thaps8405.4;Parent=Thaps8405;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . exon 508415 509636 . + . ID=Thaps8405.5;Parent=Thaps8405;constitutive=1;ensembl_end_phase=1;rank=5 chr10 ensembl protein_coding_gene 512604 513371 . + . ID=Thaps8407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E3];external_name=Thaps8407;logic_name=jgi_thaps3 chr10 ensembl transcript 512604 513371 . + . ID=Thaps8407;Parent=Thaps8407;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 512604 513371 . + 0 ID=Thaps8407;Parent=Thaps8407;rank=1 chr10 . exon 512604 513371 . + . ID=Thaps8407.1;Parent=Thaps8407;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 513764 516895 . - . ID=Thaps8408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E4];external_name=Thaps8408;logic_name=jgi_thaps3 chr10 ensembl transcript 513764 516895 . - . ID=Thaps8408;Parent=Thaps8408;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 513764 514636 . - 0 ID=Thaps8408;Parent=Thaps8408;rank=4 chr10 . exon 513764 514636 . - . ID=Thaps8408.4;Parent=Thaps8408;constitutive=1;rank=4 chr10 . CDS 514723 514989 . - 0 ID=Thaps8408;Parent=Thaps8408;rank=3 chr10 . exon 514723 514989 . - . ID=Thaps8408.3;Parent=Thaps8408;constitutive=1;rank=3 chr10 . CDS 515062 515454 . - 0 ID=Thaps8408;Parent=Thaps8408;rank=2 chr10 . exon 515062 515454 . - . ID=Thaps8408.2;Parent=Thaps8408;constitutive=1;rank=2 chr10 . CDS 515543 516895 . - 0 ID=Thaps8408;Parent=Thaps8408;rank=1 chr10 . exon 515543 516895 . - . ID=Thaps8408.1;Parent=Thaps8408;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 517243 518233 . + . ID=Thaps8409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E5];external_name=Thaps8409;logic_name=jgi_thaps3 chr10 ensembl transcript 517243 518233 . + . ID=Thaps8409;Parent=Thaps8409;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 517243 517686 . + 0 ID=Thaps8409;Parent=Thaps8409;rank=1 chr10 . exon 517243 517686 . + . ID=Thaps8409.1;Parent=Thaps8409;constitutive=1;rank=1 chr10 . CDS 517789 517863 . + 0 ID=Thaps8409;Parent=Thaps8409;rank=2 chr10 . exon 517789 517863 . + . ID=Thaps8409.2;Parent=Thaps8409;constitutive=1;rank=2 chr10 . CDS 518006 518233 . + 0 ID=Thaps8409;Parent=Thaps8409;rank=3 chr10 ensembl protein_coding_gene 524178 526061 . + . ID=Thaps24174;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E8];external_name=Thaps24174;logic_name=jgi_thaps3 chr10 ensembl transcript 524178 526061 . + . ID=Thaps24174;Parent=Thaps24174;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 524178 526061 . + 0 ID=Thaps24174;Parent=Thaps24174;rank=1 chr10 . exon 524178 526061 . + . ID=Thaps24174.1;Parent=Thaps24174;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 526991 528294 . - . ID=Thaps263669;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E9];external_name=Thaps263669;logic_name=jgi_thaps3 chr10 ensembl transcript 526991 528294 . - . ID=Thaps263669;Parent=Thaps263669;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 526991 527180 . - 0 ID=Thaps263669;Parent=Thaps263669;rank=5 chr10 . exon 526991 527180 . - . ID=Thaps263669.5;Parent=Thaps263669;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 527433 527458 . - 0 ID=Thaps263669;Parent=Thaps263669;rank=4 chr10 . exon 527433 527458 . - . ID=Thaps263669.4;Parent=Thaps263669;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 527501 527810 . - 0 ID=Thaps263669;Parent=Thaps263669;rank=3 chr10 . exon 527501 527810 . - . ID=Thaps263669.3;Parent=Thaps263669;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 527882 527985 . - 0 ID=Thaps263669;Parent=Thaps263669;rank=2 chr10 . exon 527882 527985 . - . ID=Thaps263669.2;Parent=Thaps263669;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 528148 528294 . - 0 ID=Thaps263669;Parent=Thaps263669;rank=1 chr10 ensembl protein_coding_gene 520822 522117 . - . ID=Thaps36494;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E7];external_name=Thaps36494;logic_name=jgi_thaps3 chr10 ensembl transcript 520822 522117 . - . ID=Thaps36494;Parent=Thaps36494;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 520822 522117 . - 0 ID=Thaps36494;Parent=Thaps36494;rank=1 chr10 . exon 520822 522117 . - . ID=Thaps36494.1;Parent=Thaps36494;constitutive=1;rank=1 chr10 . exon 518006 518233 . + . ID=Thaps8409.3;Parent=Thaps8409;constitutive=1;rank=3 chr10 ensembl protein_coding_gene 518777 520517 . + . ID=Thaps8410;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9E6];external_name=Thaps8410;logic_name=jgi_thaps3 chr10 ensembl transcript 518777 520517 . + . ID=Thaps8410;Parent=Thaps8410;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 518777 518852 . + 0 ID=Thaps8410;Parent=Thaps8410;rank=1 chr10 . exon 518777 518852 . + . ID=Thaps8410.1;Parent=Thaps8410;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 518991 519573 . + 0 ID=Thaps8410;Parent=Thaps8410;rank=2 chr10 . exon 518991 519573 . + . ID=Thaps8410.2;Parent=Thaps8410;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 519719 520045 . + 0 ID=Thaps8410;Parent=Thaps8410;rank=3 chr10 . exon 519719 520045 . + . ID=Thaps8410.3;Parent=Thaps8410;constitutive=1;rank=3 chr10 . CDS 520130 520517 . + 0 ID=Thaps8410;Parent=Thaps8410;rank=4 chr10 . exon 520130 520517 . + . ID=Thaps8410.4;Parent=Thaps8410;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . repeat_region 534503 534524 . ? . description=trf chr10 . repeat_region 534503 534524 . ? . description=dust chr10 . repeat_region 537758 537811 . ? . description=trf chr10 ensembl tRNA_gene 537689 537760 . + . ID=EPrTPOG00000000065;biotype=tRNA;description=tRNA-Pro for anticodon AGG [Source:TRNASCAN_SE%3BAcc:tRNA-Pro];external_name=tRNA-Pro;logic_name=ncrna_eg chr10 ensembl transcript 537689 537760 . + . ID=EPrTPOT00000000065;Parent=EPrTPOG00000000065;biotype=tRNA;logic_name=ncrna_eg chr10 . exon 537689 537760 . + . ID=EPrTPOE00000000065;Parent=EPrTPOT00000000065;constitutive=1;rank=1 chr10 . exon 528148 528294 . - . ID=Thaps263669.1;Parent=Thaps263669;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 531784 533418 . + . ID=Thaps8414;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9F0];external_name=Thaps8414;logic_name=jgi_thaps3 chr10 ensembl transcript 531784 533418 . + . ID=Thaps8414;Parent=Thaps8414;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 531784 531987 . + 0 ID=Thaps8414;Parent=Thaps8414;rank=1 chr10 . exon 531784 531987 . + . ID=Thaps8414.1;Parent=Thaps8414;constitutive=1;rank=1 chr10 . CDS 532315 533418 . + 0 ID=Thaps8414;Parent=Thaps8414;rank=2 chr10 . exon 532315 533418 . + . ID=Thaps8414.2;Parent=Thaps8414;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 533440 535020 . - . ID=Thaps8415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9F1];external_name=Thaps8415;logic_name=jgi_thaps3 chr10 ensembl transcript 533440 535020 . - . ID=Thaps8415;Parent=Thaps8415;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 533440 534498 . - 0 ID=Thaps8415;Parent=Thaps8415;rank=2 chr10 . exon 533440 534498 . - . ID=Thaps8415.2;Parent=Thaps8415;constitutive=1;rank=2 chr10 . CDS 534607 535020 . - 0 ID=Thaps8415;Parent=Thaps8415;rank=1 chr10 . exon 534607 535020 . - . ID=Thaps8415.1;Parent=Thaps8415;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 535539 536477 . + . ID=Thaps8416;biotype=protein_coding;description=Sodium symporter [Source:UniProtKB/TrEMBL%3BAcc:B8C9F2];external_name=Thaps8416;logic_name=jgi_thaps3 chr10 ensembl transcript 535539 536477 . + . ID=Thaps8416;Parent=Thaps8416;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 535539 536477 . + 0 ID=Thaps8416;Parent=Thaps8416;rank=1 chr10 . exon 535539 536477 . + . ID=Thaps8416.1;Parent=Thaps8416;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 536642 537586 . - . ID=Thaps8417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9F3];external_name=Thaps8417;logic_name=jgi_thaps3 chr10 ensembl transcript 536642 537586 . - . ID=Thaps8417;Parent=Thaps8417;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 536642 536922 . - 0 ID=Thaps8417;Parent=Thaps8417;rank=2 chr10 . exon 536642 536922 . - . ID=Thaps8417.2;Parent=Thaps8417;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 537004 537586 . - 0 ID=Thaps8417;Parent=Thaps8417;rank=1 chr10 . exon 537004 537586 . - . ID=Thaps8417.1;Parent=Thaps8417;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 547637 548884 . - . ID=Thaps14347;biotype=protein_coding;description=Amino acid transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C9F8];external_name=Thaps14347;logic_name=jgi_thaps3 chr10 ensembl transcript 547637 548884 . - . ID=Thaps14347;Parent=Thaps14347;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 547637 548884 . - 0 ID=Thaps14347;Parent=Thaps14347;rank=1 chr10 . exon 547637 548884 . - . ID=Thaps14347.1;Parent=Thaps14347;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 540856 543147 . + . ID=Thaps24177;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9F5];external_name=Thaps24177;logic_name=jgi_thaps3 chr10 ensembl transcript 540856 543147 . + . ID=Thaps24177;Parent=Thaps24177;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 540856 543147 . + 0 ID=Thaps24177;Parent=Thaps24177;rank=1 chr10 . exon 540856 543147 . + . ID=Thaps24177.1;Parent=Thaps24177;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 545620 547454 . + . ID=Thaps24178;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9F7];external_name=Thaps24178;logic_name=jgi_thaps3 chr10 ensembl transcript 545620 547454 . + . ID=Thaps24178;Parent=Thaps24178;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 545620 546243 . + 0 ID=Thaps24178;Parent=Thaps24178;rank=1 chr10 . exon 545620 546243 . + . ID=Thaps24178.1;Parent=Thaps24178;constitutive=1;rank=1 chr10 . CDS 546351 547454 . + 0 ID=Thaps24178;Parent=Thaps24178;rank=2 chr10 . exon 546351 547454 . + . ID=Thaps24178.2;Parent=Thaps24178;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 538824 539405 . - . ID=Thaps36366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9F4];external_name=Thaps36366;logic_name=jgi_thaps3 chr10 ensembl transcript 538824 539405 . - . ID=Thaps36366;Parent=Thaps36366;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 538824 539405 . - 0 ID=Thaps36366;Parent=Thaps36366;rank=1 chr10 . exon 538824 539405 . - . ID=Thaps36366.1;Parent=Thaps36366;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 543726 545429 . + . ID=Thaps8420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9F6];external_name=Thaps8420;logic_name=jgi_thaps3 chr10 ensembl transcript 543726 545429 . + . ID=Thaps8420;Parent=Thaps8420;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 543726 545429 . + 0 ID=Thaps8420;Parent=Thaps8420;rank=1 chr10 . exon 543726 545429 . + . ID=Thaps8420.1;Parent=Thaps8420;constitutive=1;rank=1 chr10 . repeat_region 548662 548669 . ? . description=dust chr10 . repeat_region 550488 550546 . ? . description=dust chr10 . repeat_region 550503 550536 . ? . description=trf chr10 ensembl protein_coding_gene 553786 554907 . - . ID=Thaps24180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G0];external_name=Thaps24180;logic_name=jgi_thaps3 chr10 ensembl transcript 553786 554907 . - . ID=Thaps24180;Parent=Thaps24180;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 553786 554907 . - 0 ID=Thaps24180;Parent=Thaps24180;rank=1 chr10 . exon 553786 554907 . - . ID=Thaps24180.1;Parent=Thaps24180;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 555867 556391 . + . ID=Thaps36406;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G1];external_name=Thaps36406;logic_name=jgi_thaps3 chr10 ensembl transcript 555867 556391 . + . ID=Thaps36406;Parent=Thaps36406;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 555867 556391 . + 0 ID=Thaps36406;Parent=Thaps36406;rank=1 chr10 . exon 555867 556391 . + . ID=Thaps36406.1;Parent=Thaps36406;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 550816 552306 . + . ID=Thaps36477;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9F9];external_name=Thaps36477;logic_name=jgi_thaps3 chr10 ensembl transcript 550816 552306 . + . ID=Thaps36477;Parent=Thaps36477;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 550816 552306 . + 0 ID=Thaps36477;Parent=Thaps36477;rank=1 chr10 . exon 550816 552306 . + . ID=Thaps36477.1;Parent=Thaps36477;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 556909 558047 . + . ID=Thaps8426;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G2];external_name=Thaps8426;logic_name=jgi_thaps3 chr10 ensembl transcript 556909 558047 . + . ID=Thaps8426;Parent=Thaps8426;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 556909 557058 . + 0 ID=Thaps8426;Parent=Thaps8426;rank=1 chr10 . exon 556909 557058 . + . ID=Thaps8426.1;Parent=Thaps8426;constitutive=1;rank=1 chr10 . CDS 557216 557479 . + 0 ID=Thaps8426;Parent=Thaps8426;rank=2 chr10 . exon 557216 557479 . + . ID=Thaps8426.2;Parent=Thaps8426;constitutive=1;rank=2 chr10 . CDS 557583 558047 . + 0 ID=Thaps8426;Parent=Thaps8426;rank=3 chr10 . exon 557583 558047 . + . ID=Thaps8426.3;Parent=Thaps8426;constitutive=1;rank=3 chr10 ensembl protein_coding_gene 559890 565203 . + . ID=Thaps24182;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G3];external_name=Thaps24182;logic_name=jgi_thaps3 chr10 ensembl transcript 559890 565203 . + . ID=Thaps24182;Parent=Thaps24182;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 559890 563292 . + 0 ID=Thaps24182;Parent=Thaps24182;rank=1 chr10 . exon 559890 563292 . + . ID=Thaps24182.1;Parent=Thaps24182;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 563381 565203 . + 0 ID=Thaps24182;Parent=Thaps24182;rank=2 chr10 . exon 563381 565203 . + . ID=Thaps24182.2;Parent=Thaps24182;constitutive=1;ensembl_end_phase=2;rank=2 chr10 ensembl protein_coding_gene 565385 567211 . - . ID=Thaps8428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G4];external_name=Thaps8428;logic_name=jgi_thaps3 chr10 ensembl transcript 565385 567211 . - . ID=Thaps8428;Parent=Thaps8428;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 565385 567211 . - 0 ID=Thaps8428;Parent=Thaps8428;rank=1 chr10 . exon 565385 567211 . - . ID=Thaps8428.1;Parent=Thaps8428;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 567410 570198 . + . ID=Thaps8429;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G5];external_name=Thaps8429;logic_name=jgi_thaps3 chr10 ensembl transcript 567410 570198 . + . ID=Thaps8429;Parent=Thaps8429;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 567410 567541 . + 0 ID=Thaps8429;Parent=Thaps8429;rank=1 chr10 . exon 567410 567541 . + . ID=Thaps8429.1;Parent=Thaps8429;constitutive=1;rank=1 chr10 . CDS 567640 567903 . + 0 ID=Thaps8429;Parent=Thaps8429;rank=2 chr10 . exon 567640 567903 . + . ID=Thaps8429.2;Parent=Thaps8429;constitutive=1;rank=2 chr10 . CDS 568004 568471 . + 0 ID=Thaps8429;Parent=Thaps8429;rank=3 chr10 . CDS 568621 570198 . + 0 ID=Thaps8429;Parent=Thaps8429;rank=4 chr10 . repeat_region 572577 572584 . ? . description=dust chr10 ensembl protein_coding_gene 570390 574572 . + . ID=Thaps24183;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G6];external_name=Thaps24183;logic_name=jgi_thaps3 chr10 ensembl transcript 570390 574572 . + . ID=Thaps24183;Parent=Thaps24183;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 570390 574082 . + 0 ID=Thaps24183;Parent=Thaps24183;rank=1 chr10 . exon 570390 574082 . + . ID=Thaps24183.1;Parent=Thaps24183;constitutive=1;rank=1 chr10 . CDS 574184 574274 . + 0 ID=Thaps24183;Parent=Thaps24183;rank=2 chr10 . exon 574184 574274 . + . ID=Thaps24183.2;Parent=Thaps24183;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 574358 574572 . + 0 ID=Thaps24183;Parent=Thaps24183;rank=3 chr10 . exon 574358 574572 . + . ID=Thaps24183.3;Parent=Thaps24183;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . exon 568004 568471 . + . ID=Thaps8429.3;Parent=Thaps8429;constitutive=1;rank=3 chr10 . exon 568621 570198 . + . ID=Thaps8429.4;Parent=Thaps8429;constitutive=1;rank=4 chr10 ensembl protein_coding_gene 574634 577167 . - . ID=Thaps8431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G7];external_name=Thaps8431;logic_name=jgi_thaps3 chr10 ensembl transcript 574634 577167 . - . ID=Thaps8431;Parent=Thaps8431;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 574634 575128 . - 0 ID=Thaps8431;Parent=Thaps8431;rank=2 chr10 . exon 574634 575128 . - . ID=Thaps8431.2;Parent=Thaps8431;constitutive=1;rank=2 chr10 . CDS 575269 577167 . - 0 ID=Thaps8431;Parent=Thaps8431;rank=1 chr10 . exon 575269 577167 . - . ID=Thaps8431.1;Parent=Thaps8431;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 577391 578680 . + . ID=Thaps8432;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G8];external_name=Thaps8432;logic_name=jgi_thaps3 chr10 ensembl transcript 577391 578680 . + . ID=Thaps8432;Parent=Thaps8432;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 577391 577647 . + 0 ID=Thaps8432;Parent=Thaps8432;rank=1 chr10 . exon 577391 577647 . + . ID=Thaps8432.1;Parent=Thaps8432;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 577726 577770 . + 0 ID=Thaps8432;Parent=Thaps8432;rank=2 chr10 . exon 577726 577770 . + . ID=Thaps8432.2;Parent=Thaps8432;constitutive=1;rank=2 chr10 . CDS 577846 578680 . + 0 ID=Thaps8432;Parent=Thaps8432;rank=3 chr10 ensembl protein_coding_gene 582048 584670 . - . ID=Thaps24184;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9H0];external_name=Thaps24184;logic_name=jgi_thaps3 chr10 ensembl transcript 582048 584670 . - . ID=Thaps24184;Parent=Thaps24184;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 582048 584196 . - 0 ID=Thaps24184;Parent=Thaps24184;rank=3 chr10 . exon 582048 584196 . - . ID=Thaps24184.3;Parent=Thaps24184;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 584293 584354 . - 0 ID=Thaps24184;Parent=Thaps24184;rank=2 chr10 . exon 584293 584354 . - . ID=Thaps24184.2;Parent=Thaps24184;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 584527 584670 . - 0 ID=Thaps24184;Parent=Thaps24184;rank=1 chr10 . exon 584527 584670 . - . ID=Thaps24184.1;Parent=Thaps24184;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 586245 586733 . + . ID=Thaps36501;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9H1];external_name=Thaps36501;logic_name=jgi_thaps3 chr10 ensembl transcript 586245 586733 . + . ID=Thaps36501;Parent=Thaps36501;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 586245 586436 . + 0 ID=Thaps36501;Parent=Thaps36501;rank=1 chr10 . exon 586245 586436 . + . ID=Thaps36501.1;Parent=Thaps36501;constitutive=1;rank=1 chr10 . CDS 586524 586733 . + 0 ID=Thaps36501;Parent=Thaps36501;rank=2 chr10 . exon 586524 586733 . + . ID=Thaps36501.2;Parent=Thaps36501;constitutive=1;rank=2 chr10 . exon 577846 578680 . + . ID=Thaps8432.3;Parent=Thaps8432;constitutive=1;ensembl_end_phase=1;rank=3 chr10 ensembl protein_coding_gene 578916 580384 . - . ID=Thaps8433;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9G9];external_name=Thaps8433;logic_name=jgi_thaps3 chr10 ensembl transcript 578916 580384 . - . ID=Thaps8433;Parent=Thaps8433;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 578916 579897 . - 0 ID=Thaps8433;Parent=Thaps8433;rank=3 chr10 . exon 578916 579897 . - . ID=Thaps8433.3;Parent=Thaps8433;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 580050 580093 . - 0 ID=Thaps8433;Parent=Thaps8433;rank=2 chr10 . exon 580050 580093 . - . ID=Thaps8433.2;Parent=Thaps8433;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 580226 580384 . - 0 ID=Thaps8433;Parent=Thaps8433;rank=1 chr10 . exon 580226 580384 . - . ID=Thaps8433.1;Parent=Thaps8433;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 597058 599289 . + . ID=Thaps24187;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9H6];external_name=Thaps24187;logic_name=jgi_thaps3 chr10 ensembl transcript 597058 599289 . + . ID=Thaps24187;Parent=Thaps24187;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 597058 599289 . + 0 ID=Thaps24187;Parent=Thaps24187;rank=1 chr10 . exon 597058 599289 . + . ID=Thaps24187.1;Parent=Thaps24187;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 588454 588981 . - . ID=Thaps8436;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9H2];external_name=Thaps8436;logic_name=jgi_thaps3 chr10 ensembl transcript 588454 588981 . - . ID=Thaps8436;Parent=Thaps8436;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 588454 588803 . - 0 ID=Thaps8436;Parent=Thaps8436;rank=2 chr10 . exon 588454 588803 . - . ID=Thaps8436.2;Parent=Thaps8436;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 588936 588981 . - 0 ID=Thaps8436;Parent=Thaps8436;rank=1 chr10 . exon 588936 588981 . - . ID=Thaps8436.1;Parent=Thaps8436;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 589704 590616 . + . ID=Thaps8437;biotype=protein_coding;description=Na+/K+ ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8C9H3];external_name=Thaps8437;logic_name=jgi_thaps3 chr10 ensembl transcript 589704 590616 . + . ID=Thaps8437;Parent=Thaps8437;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 589704 589909 . + 0 ID=Thaps8437;Parent=Thaps8437;rank=1 chr10 . exon 589704 589909 . + . ID=Thaps8437.1;Parent=Thaps8437;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 590034 590616 . + 0 ID=Thaps8437;Parent=Thaps8437;rank=2 chr10 . exon 590034 590616 . + . ID=Thaps8437.2;Parent=Thaps8437;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 591982 594894 . + . ID=Thaps8438;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9H4];external_name=Thaps8438;logic_name=jgi_thaps3 chr10 ensembl transcript 591982 594894 . + . ID=Thaps8438;Parent=Thaps8438;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 591982 593981 . + 0 ID=Thaps8438;Parent=Thaps8438;rank=1 chr10 . exon 591982 593981 . + . ID=Thaps8438.1;Parent=Thaps8438;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 594053 594405 . + 0 ID=Thaps8438;Parent=Thaps8438;rank=2 chr10 . exon 594053 594405 . + . ID=Thaps8438.2;Parent=Thaps8438;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 594479 594894 . + 0 ID=Thaps8438;Parent=Thaps8438;rank=3 chr10 . exon 594479 594894 . + . ID=Thaps8438.3;Parent=Thaps8438;constitutive=1;ensembl_end_phase=2;rank=3 chr10 ensembl protein_coding_gene 595341 596558 . - . ID=Thaps8439;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9H5];external_name=Thaps8439;logic_name=jgi_thaps3 chr10 ensembl transcript 595341 596558 . - . ID=Thaps8439;Parent=Thaps8439;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 595341 596558 . - 0 ID=Thaps8439;Parent=Thaps8439;rank=1 chr10 . exon 595341 596558 . - . ID=Thaps8439.1;Parent=Thaps8439;constitutive=1;rank=1 chr10 . repeat_region 606424 606432 . ? . description=dust chr10 ensembl protein_coding_gene 603790 605724 . - . ID=Thaps24189;biotype=protein_coding;description=Putative uncharacterized protein bZIP5 [Source:UniProtKB/TrEMBL%3BAcc:B8C9H9];external_name=BZIP5;logic_name=jgi_thaps3 chr10 ensembl transcript 603790 605724 . - . ID=Thaps24189;Parent=Thaps24189;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 603790 604792 . - 0 ID=Thaps24189;Parent=Thaps24189;rank=2 chr10 . exon 603790 604792 . - . ID=Thaps24189.2;Parent=Thaps24189;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 605327 605724 . - 0 ID=Thaps24189;Parent=Thaps24189;rank=1 chr10 . exon 605327 605724 . - . ID=Thaps24189.1;Parent=Thaps24189;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 601420 602448 . + . ID=Thaps36368;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9H7];external_name=Thaps36368;logic_name=jgi_thaps3 chr10 ensembl transcript 601420 602448 . + . ID=Thaps36368;Parent=Thaps36368;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 601420 601653 . + 0 ID=Thaps36368;Parent=Thaps36368;rank=1 chr10 . exon 601420 601653 . + . ID=Thaps36368.1;Parent=Thaps36368;constitutive=1;rank=1 chr10 . CDS 601708 602448 . + 0 ID=Thaps36368;Parent=Thaps36368;rank=2 chr10 . exon 601708 602448 . + . ID=Thaps36368.2;Parent=Thaps36368;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 607024 608677 . + . ID=Thaps36429;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I0];external_name=NTT1;logic_name=jgi_thaps3 chr10 ensembl transcript 607024 608677 . + . ID=Thaps36429;Parent=Thaps36429;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 607024 607525 . + 0 ID=Thaps36429;Parent=Thaps36429;rank=1 chr10 . exon 607024 607525 . + . ID=Thaps36429.1;Parent=Thaps36429;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 607638 608023 . + 0 ID=Thaps36429;Parent=Thaps36429;rank=2 chr10 . CDS 608102 608677 . + 0 ID=Thaps36429;Parent=Thaps36429;rank=3 chr10 ensembl protein_coding_gene 602832 603179 . + . ID=Thaps36539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9H8];external_name=Thaps36539;logic_name=jgi_thaps3 chr10 ensembl transcript 602832 603179 . + . ID=Thaps36539;Parent=Thaps36539;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 602832 603179 . + 0 ID=Thaps36539;Parent=Thaps36539;rank=1 chr10 . exon 602832 603179 . + . ID=Thaps36539.1;Parent=Thaps36539;constitutive=1;rank=1 chr10 . repeat_region 615916 615948 . ? . description=trf chr10 ensembl protein_coding_gene 615265 616242 . + . ID=Thaps17585;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I3];external_name=Thaps17585;logic_name=jgi_thaps3 chr10 ensembl transcript 615265 616242 . + . ID=Thaps17585;Parent=Thaps17585;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 615265 615453 . + 0 ID=Thaps17585;Parent=Thaps17585;rank=1 chr10 . exon 615265 615453 . + . ID=Thaps17585.1;Parent=Thaps17585;constitutive=1;rank=1 chr10 . CDS 615625 615813 . + 0 ID=Thaps17585;Parent=Thaps17585;rank=2 chr10 . exon 615625 615813 . + . ID=Thaps17585.2;Parent=Thaps17585;constitutive=1;rank=2 chr10 . CDS 615928 616023 . + 0 ID=Thaps17585;Parent=Thaps17585;rank=3 chr10 . exon 615928 616023 . + . ID=Thaps17585.3;Parent=Thaps17585;constitutive=1;rank=3 chr10 . CDS 616135 616242 . + 0 ID=Thaps17585;Parent=Thaps17585;rank=4 chr10 . exon 616135 616242 . + . ID=Thaps17585.4;Parent=Thaps17585;constitutive=1;rank=4 chr10 . exon 607638 608023 . + . ID=Thaps36429.2;Parent=Thaps36429;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . exon 608102 608677 . + . ID=Thaps36429.3;Parent=Thaps36429;constitutive=1;rank=3 chr10 ensembl protein_coding_gene 609928 610770 . - . ID=Thaps8445;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I1];external_name=Thaps8445;logic_name=jgi_thaps3 chr10 ensembl transcript 609928 610770 . - . ID=Thaps8445;Parent=Thaps8445;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 609928 609930 . - 0 ID=Thaps8445;Parent=Thaps8445;rank=3 chr10 . exon 609928 609930 . - . ID=Thaps8445.3;Parent=Thaps8445;constitutive=1;rank=3 chr10 . CDS 610032 610295 . - 0 ID=Thaps8445;Parent=Thaps8445;rank=2 chr10 . exon 610032 610295 . - . ID=Thaps8445.2;Parent=Thaps8445;constitutive=1;rank=2 chr10 . CDS 610384 610770 . - 0 ID=Thaps8445;Parent=Thaps8445;rank=1 chr10 . exon 610384 610770 . - . ID=Thaps8445.1;Parent=Thaps8445;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 612283 613548 . + . ID=Thaps8446;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I2];external_name=Thaps8446;logic_name=jgi_thaps3 chr10 ensembl transcript 612283 613548 . + . ID=Thaps8446;Parent=Thaps8446;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 612283 613548 . + 0 ID=Thaps8446;Parent=Thaps8446;rank=1 chr10 . exon 612283 613548 . + . ID=Thaps8446.1;Parent=Thaps8446;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 616957 617775 . + . ID=Thaps8448;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I4];external_name=Thaps8448;logic_name=jgi_thaps3 chr10 ensembl transcript 616957 617775 . + . ID=Thaps8448;Parent=Thaps8448;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 616957 617775 . + 0 ID=Thaps8448;Parent=Thaps8448;rank=1 chr10 . exon 616957 617775 . + . ID=Thaps8448.1;Parent=Thaps8448;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 622798 623690 . + . ID=Thaps263682;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I7];external_name=Thaps263682;logic_name=jgi_thaps3 chr10 ensembl transcript 622798 623690 . + . ID=Thaps263682;Parent=Thaps263682;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 622798 623690 . + 0 ID=Thaps263682;Parent=Thaps263682;rank=1 chr10 . exon 622798 623690 . + . ID=Thaps263682.1;Parent=Thaps263682;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 623976 625711 . + . ID=Thaps269513;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I8];external_name=Thaps269513;logic_name=jgi_thaps3 chr10 ensembl transcript 623976 625711 . + . ID=Thaps269513;Parent=Thaps269513;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 623976 624197 . + 0 ID=Thaps269513;Parent=Thaps269513;rank=1 chr10 . exon 623976 624197 . + . ID=Thaps269513.1;Parent=Thaps269513;constitutive=1;rank=1 chr10 . CDS 624271 624534 . + 0 ID=Thaps269513;Parent=Thaps269513;rank=2 chr10 . exon 624271 624534 . + . ID=Thaps269513.2;Parent=Thaps269513;constitutive=1;rank=2 chr10 . CDS 624610 624644 . + 0 ID=Thaps269513;Parent=Thaps269513;rank=3 chr10 . exon 624610 624644 . + . ID=Thaps269513.3;Parent=Thaps269513;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 624722 624836 . + 0 ID=Thaps269513;Parent=Thaps269513;rank=4 chr10 . exon 624722 624836 . + . ID=Thaps269513.4;Parent=Thaps269513;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 624911 624926 . + 0 ID=Thaps269513;Parent=Thaps269513;rank=5 chr10 . exon 624911 624926 . + . ID=Thaps269513.5;Parent=Thaps269513;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 624942 625530 . + 0 ID=Thaps269513;Parent=Thaps269513;rank=6 chr10 . exon 624942 625530 . + . ID=Thaps269513.6;Parent=Thaps269513;constitutive=1;ensembl_end_phase=1;rank=6 chr10 . CDS 625609 625711 . + 0 ID=Thaps269513;Parent=Thaps269513;rank=7 chr10 . exon 625609 625711 . + . ID=Thaps269513.7;Parent=Thaps269513;constitutive=1;ensembl_end_phase=1;rank=7 chr10 ensembl protein_coding_gene 625800 626588 . - . ID=Thaps29469;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I9];external_name=Thaps29469;logic_name=jgi_thaps3 chr10 ensembl transcript 625800 626588 . - . ID=Thaps29469;Parent=Thaps29469;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 625800 626017 . - 0 ID=Thaps29469;Parent=Thaps29469;rank=2 chr10 . exon 625800 626017 . - . ID=Thaps29469.2;Parent=Thaps29469;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 626099 626588 . - 0 ID=Thaps29469;Parent=Thaps29469;rank=1 chr10 . exon 626099 626588 . - . ID=Thaps29469.1;Parent=Thaps29469;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 617909 619193 . - . ID=Thaps8449;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I5];external_name=Thaps8449;logic_name=jgi_thaps3 chr10 ensembl transcript 617909 619193 . - . ID=Thaps8449;Parent=Thaps8449;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 617909 618610 . - 0 ID=Thaps8449;Parent=Thaps8449;rank=3 chr10 . exon 617909 618610 . - . ID=Thaps8449.3;Parent=Thaps8449;constitutive=1;rank=3 chr10 . CDS 618699 618807 . - 0 ID=Thaps8449;Parent=Thaps8449;rank=2 chr10 . exon 618699 618807 . - . ID=Thaps8449.2;Parent=Thaps8449;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 618883 619193 . - 0 ID=Thaps8449;Parent=Thaps8449;rank=1 chr10 . exon 618883 619193 . - . ID=Thaps8449.1;Parent=Thaps8449;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 619457 621643 . + . ID=Thaps8450;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9I6];external_name=Thaps8450;logic_name=jgi_thaps3 chr10 ensembl transcript 619457 621643 . + . ID=Thaps8450;Parent=Thaps8450;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 619457 619550 . + 0 ID=Thaps8450;Parent=Thaps8450;rank=1 chr10 . exon 619457 619550 . + . ID=Thaps8450.1;Parent=Thaps8450;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 619622 620774 . + 0 ID=Thaps8450;Parent=Thaps8450;rank=2 chr10 . exon 619622 620774 . + . ID=Thaps8450.2;Parent=Thaps8450;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 621136 621643 . + 0 ID=Thaps8450;Parent=Thaps8450;rank=3 chr10 . exon 621136 621643 . + . ID=Thaps8450.3;Parent=Thaps8450;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . repeat_region 631298 631340 . ? . description=trf chr10 . repeat_region 632696 632732 . ? . description=trf chr10 ensembl protein_coding_gene 631123 633316 . + . ID=Thaps24195;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J2];external_name=Thaps24195;logic_name=jgi_thaps3 chr10 ensembl transcript 631123 633316 . + . ID=Thaps24195;Parent=Thaps24195;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 631123 631315 . + 0 ID=Thaps24195;Parent=Thaps24195;rank=1 chr10 . exon 631123 631315 . + . ID=Thaps24195.1;Parent=Thaps24195;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 631348 632123 . + 0 ID=Thaps24195;Parent=Thaps24195;rank=2 chr10 . exon 631348 632123 . + . ID=Thaps24195.2;Parent=Thaps24195;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 632204 632278 . + 0 ID=Thaps24195;Parent=Thaps24195;rank=3 chr10 . exon 632204 632278 . + . ID=Thaps24195.3;Parent=Thaps24195;constitutive=1;rank=3 chr10 . CDS 632408 633316 . + 0 ID=Thaps24195;Parent=Thaps24195;rank=4 chr10 . exon 632408 633316 . + . ID=Thaps24195.4;Parent=Thaps24195;constitutive=1;rank=4 chr10 ensembl protein_coding_gene 637081 638730 . - . ID=Thaps24197;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J5];external_name=Thaps24197;logic_name=jgi_thaps3 chr10 ensembl transcript 637081 638730 . - . ID=Thaps24197;Parent=Thaps24197;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 637081 638730 . - 0 ID=Thaps24197;Parent=Thaps24197;rank=1 chr10 . exon 637081 638730 . - . ID=Thaps24197.1;Parent=Thaps24197;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 634838 636889 . + . ID=Thaps26365;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J4];external_name=Thaps26365;logic_name=jgi_thaps3 chr10 ensembl transcript 634838 636889 . + . ID=Thaps26365;Parent=Thaps26365;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 634838 636889 . + 0 ID=Thaps26365;Parent=Thaps26365;rank=1 chr10 . exon 634838 636889 . + . ID=Thaps26365.1;Parent=Thaps26365;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 629579 630874 . - . ID=Thaps36511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J1];external_name=Thaps36511;logic_name=jgi_thaps3 chr10 ensembl transcript 629579 630874 . - . ID=Thaps36511;Parent=Thaps36511;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 629579 629762 . - 0 ID=Thaps36511;Parent=Thaps36511;rank=2 chr10 . exon 629579 629762 . - . ID=Thaps36511.2;Parent=Thaps36511;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 630219 630874 . - 0 ID=Thaps36511;Parent=Thaps36511;rank=1 chr10 . exon 630219 630874 . - . ID=Thaps36511.1;Parent=Thaps36511;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 633477 633914 . - . ID=Thaps36557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J3];external_name=Thaps36557;logic_name=jgi_thaps3 chr10 ensembl transcript 633477 633914 . - . ID=Thaps36557;Parent=Thaps36557;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 633477 633914 . - 0 ID=Thaps36557;Parent=Thaps36557;rank=1 chr10 . exon 633477 633914 . - . ID=Thaps36557.1;Parent=Thaps36557;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 628107 628790 . + . ID=Thaps8453;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J0];external_name=Thaps8453;logic_name=jgi_thaps3 chr10 ensembl transcript 628107 628790 . + . ID=Thaps8453;Parent=Thaps8453;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 628107 628790 . + 0 ID=Thaps8453;Parent=Thaps8453;rank=1 chr10 . exon 628107 628790 . + . ID=Thaps8453.1;Parent=Thaps8453;constitutive=1;rank=1 chr10 . repeat_region 643094 643112 . ? . description=dust chr10 . biological_region 645924 645925 0.999 + . logic_name=eponine chr10 ensembl protein_coding_gene 645182 646419 . - . ID=Thaps24198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J9];external_name=Thaps24198;logic_name=jgi_thaps3 chr10 ensembl transcript 645182 646419 . - . ID=Thaps24198;Parent=Thaps24198;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 645182 646290 . - 0 ID=Thaps24198;Parent=Thaps24198;rank=2 chr10 . exon 645182 646290 . - . ID=Thaps24198.2;Parent=Thaps24198;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 646329 646419 . - 0 ID=Thaps24198;Parent=Thaps24198;rank=1 chr10 . exon 646329 646419 . - . ID=Thaps24198.1;Parent=Thaps24198;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 646996 648719 . + . ID=Thaps24199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9K0];external_name=Thaps24199;logic_name=jgi_thaps3 chr10 ensembl transcript 646996 648719 . + . ID=Thaps24199;Parent=Thaps24199;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 646996 647646 . + 0 ID=Thaps24199;Parent=Thaps24199;rank=1 chr10 . exon 646996 647646 . + . ID=Thaps24199.1;Parent=Thaps24199;constitutive=1;rank=1 chr10 . CDS 647742 648719 . + 0 ID=Thaps24199;Parent=Thaps24199;rank=2 chr10 ensembl protein_coding_gene 638954 640426 . + . ID=Thaps8459;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J6];external_name=Thaps8459;logic_name=jgi_thaps3 chr10 ensembl transcript 638954 640426 . + . ID=Thaps8459;Parent=Thaps8459;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 638954 640426 . + 0 ID=Thaps8459;Parent=Thaps8459;rank=1 chr10 . exon 638954 640426 . + . ID=Thaps8459.1;Parent=Thaps8459;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 640898 642106 . + . ID=Thaps8460;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J7];external_name=Thaps8460;logic_name=jgi_thaps3 chr10 ensembl transcript 640898 642106 . + . ID=Thaps8460;Parent=Thaps8460;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 640898 642106 . + 0 ID=Thaps8460;Parent=Thaps8460;rank=1 chr10 . exon 640898 642106 . + . ID=Thaps8460.1;Parent=Thaps8460;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 642602 643443 . - . ID=Thaps8461;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9J8];external_name=Thaps8461;logic_name=jgi_thaps3 chr10 ensembl transcript 642602 643443 . - . ID=Thaps8461;Parent=Thaps8461;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 642602 642981 . - 0 ID=Thaps8461;Parent=Thaps8461;rank=2 chr10 . exon 642602 642981 . - . ID=Thaps8461.2;Parent=Thaps8461;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 643095 643443 . - 0 ID=Thaps8461;Parent=Thaps8461;rank=1 chr10 . exon 643095 643443 . - . ID=Thaps8461.1;Parent=Thaps8461;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . repeat_region 649361 649388 . ? . description=trf chr10 . exon 647742 648719 . + . ID=Thaps24199.2;Parent=Thaps24199;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 650523 651677 . - . ID=Thaps263685;biotype=protein_coding;description=Zinc-dependent alcohol dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C9K2];external_name=Thaps263685;logic_name=jgi_thaps3 chr10 ensembl transcript 650523 651677 . - . ID=Thaps263685;Parent=Thaps263685;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 650523 650724 . - 0 ID=Thaps263685;Parent=Thaps263685;rank=5 chr10 . exon 650523 650724 . - . ID=Thaps263685.5;Parent=Thaps263685;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 650770 650959 . - 0 ID=Thaps263685;Parent=Thaps263685;rank=4 chr10 . exon 650770 650959 . - . ID=Thaps263685.4;Parent=Thaps263685;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 651038 651342 . - 0 ID=Thaps263685;Parent=Thaps263685;rank=3 chr10 . exon 651038 651342 . - . ID=Thaps263685.3;Parent=Thaps263685;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 651394 651492 . - 0 ID=Thaps263685;Parent=Thaps263685;rank=2 chr10 . exon 651394 651492 . - . ID=Thaps263685.2;Parent=Thaps263685;constitutive=1;rank=2 chr10 . CDS 651523 651677 . - 0 ID=Thaps263685;Parent=Thaps263685;rank=1 chr10 . exon 651523 651677 . - . ID=Thaps263685.1;Parent=Thaps263685;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 654328 657507 . + . ID=Thaps269515;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9K3];external_name=Thaps269515;logic_name=jgi_thaps3 chr10 ensembl transcript 654328 657507 . + . ID=Thaps269515;Parent=Thaps269515;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 654328 654696 . + 0 ID=Thaps269515;Parent=Thaps269515;rank=1 chr10 . exon 654328 654696 . + . ID=Thaps269515.1;Parent=Thaps269515;constitutive=1;rank=1 chr10 . CDS 654826 655417 . + 0 ID=Thaps269515;Parent=Thaps269515;rank=2 chr10 . exon 654826 655417 . + . ID=Thaps269515.2;Parent=Thaps269515;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 655481 655599 . + 0 ID=Thaps269515;Parent=Thaps269515;rank=3 chr10 . exon 655481 655599 . + . ID=Thaps269515.3;Parent=Thaps269515;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 655764 656118 . + 0 ID=Thaps269515;Parent=Thaps269515;rank=4 chr10 . exon 655764 656118 . + . ID=Thaps269515.4;Parent=Thaps269515;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 656900 657507 . + 0 ID=Thaps269515;Parent=Thaps269515;rank=5 chr10 . exon 656900 657507 . + . ID=Thaps269515.5;Parent=Thaps269515;constitutive=1;ensembl_end_phase=2;rank=5 chr10 ensembl protein_coding_gene 649406 650062 . + . ID=Thaps8464;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9K1];external_name=Thaps8464;logic_name=jgi_thaps3 chr10 ensembl transcript 649406 650062 . + . ID=Thaps8464;Parent=Thaps8464;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 649406 650062 . + 0 ID=Thaps8464;Parent=Thaps8464;rank=1 chr10 . exon 649406 650062 . + . ID=Thaps8464.1;Parent=Thaps8464;constitutive=1;rank=1 chr10 . repeat_region 663365 663393 . ? . description=dust chr10 ensembl protein_coding_gene 658921 661937 . + . ID=Thaps24201;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9K4];external_name=Thaps24201;logic_name=jgi_thaps3 chr10 ensembl transcript 658921 661937 . + . ID=Thaps24201;Parent=Thaps24201;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 658921 659082 . + 0 ID=Thaps24201;Parent=Thaps24201;rank=1 chr10 . exon 658921 659082 . + . ID=Thaps24201.1;Parent=Thaps24201;constitutive=1;rank=1 chr10 . CDS 659162 660345 . + 0 ID=Thaps24201;Parent=Thaps24201;rank=2 chr10 . exon 659162 660345 . + . ID=Thaps24201.2;Parent=Thaps24201;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 660433 661431 . + 0 ID=Thaps24201;Parent=Thaps24201;rank=3 chr10 . exon 660433 661431 . + . ID=Thaps24201.3;Parent=Thaps24201;constitutive=1;rank=3 chr10 . CDS 661517 661937 . + 0 ID=Thaps24201;Parent=Thaps24201;rank=4 chr10 . exon 661517 661937 . + . ID=Thaps24201.4;Parent=Thaps24201;constitutive=1;ensembl_end_phase=1;rank=4 chr10 ensembl protein_coding_gene 664490 665496 . - . ID=Thaps263687;biotype=protein_coding;description=26S proteasome subunit beta type 1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9K6];external_name=PSB_2;logic_name=jgi_thaps3 chr10 ensembl transcript 664490 665496 . - . ID=Thaps263687;Parent=Thaps263687;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 664490 664616 . - 0 ID=Thaps263687;Parent=Thaps263687;rank=5 chr10 . exon 664490 664616 . - . ID=Thaps263687.5;Parent=Thaps263687;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 664698 664744 . - 0 ID=Thaps263687;Parent=Thaps263687;rank=4 chr10 . exon 664698 664744 . - . ID=Thaps263687.4;Parent=Thaps263687;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 664766 665120 . - 0 ID=Thaps263687;Parent=Thaps263687;rank=3 chr10 . exon 664766 665120 . - . ID=Thaps263687.3;Parent=Thaps263687;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 665257 665267 . - 0 ID=Thaps263687;Parent=Thaps263687;rank=2 chr10 . exon 665257 665267 . - . ID=Thaps263687.2;Parent=Thaps263687;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 665378 665496 . - 0 ID=Thaps263687;Parent=Thaps263687;rank=1 chr10 . exon 665378 665496 . - . ID=Thaps263687.1;Parent=Thaps263687;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 666129 666518 . - . ID=Thaps36438;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9K7];external_name=Thaps36438;logic_name=jgi_thaps3 chr10 ensembl transcript 666129 666518 . - . ID=Thaps36438;Parent=Thaps36438;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 666129 666518 . - 0 ID=Thaps36438;Parent=Thaps36438;rank=1 chr10 . exon 666129 666518 . - . ID=Thaps36438.1;Parent=Thaps36438;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 662288 663268 . - . ID=Thaps8469;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9K5];external_name=Thaps8469;logic_name=jgi_thaps3 chr10 ensembl transcript 662288 663268 . - . ID=Thaps8469;Parent=Thaps8469;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 662288 663268 . - 0 ID=Thaps8469;Parent=Thaps8469;rank=1 chr10 . exon 662288 663268 . - . ID=Thaps8469.1;Parent=Thaps8469;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 669498 670919 . - . ID=Thaps24204;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9K9];external_name=Thaps24204;logic_name=jgi_thaps3 chr10 ensembl transcript 669498 670919 . - . ID=Thaps24204;Parent=Thaps24204;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 669498 670919 . - 0 ID=Thaps24204;Parent=Thaps24204;rank=1 chr10 . exon 669498 670919 . - . ID=Thaps24204.1;Parent=Thaps24204;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 671584 673406 . + . ID=Thaps24205;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9L0];external_name=Thaps24205;logic_name=jgi_thaps3 chr10 ensembl transcript 671584 673406 . + . ID=Thaps24205;Parent=Thaps24205;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 671584 672437 . + 0 ID=Thaps24205;Parent=Thaps24205;rank=1 chr10 . exon 671584 672437 . + . ID=Thaps24205.1;Parent=Thaps24205;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 672516 672906 . + 0 ID=Thaps24205;Parent=Thaps24205;rank=2 chr10 . exon 672516 672906 . + . ID=Thaps24205.2;Parent=Thaps24205;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 672975 673406 . + 0 ID=Thaps24205;Parent=Thaps24205;rank=3 chr10 . exon 672975 673406 . + . ID=Thaps24205.3;Parent=Thaps24205;constitutive=1;rank=3 chr10 ensembl protein_coding_gene 676695 679528 . - . ID=Thaps24206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9L2];external_name=Thaps24206;logic_name=jgi_thaps3 chr10 ensembl transcript 676695 679528 . - . ID=Thaps24206;Parent=Thaps24206;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 676695 677093 . - 0 ID=Thaps24206;Parent=Thaps24206;rank=4 chr10 . exon 676695 677093 . - . ID=Thaps24206.4;Parent=Thaps24206;constitutive=1;rank=4 chr10 . CDS 677182 677625 . - 0 ID=Thaps24206;Parent=Thaps24206;rank=3 chr10 . exon 677182 677625 . - . ID=Thaps24206.3;Parent=Thaps24206;constitutive=1;rank=3 chr10 . CDS 677702 678237 . - 0 ID=Thaps24206;Parent=Thaps24206;rank=2 chr10 . CDS 678334 679528 . - 0 ID=Thaps24206;Parent=Thaps24206;rank=1 chr10 ensembl protein_coding_gene 667878 668954 . - . ID=Thaps8472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9K8];external_name=Thaps8472;logic_name=jgi_thaps3 chr10 ensembl transcript 667878 668954 . - . ID=Thaps8472;Parent=Thaps8472;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 667878 668954 . - 0 ID=Thaps8472;Parent=Thaps8472;rank=1 chr10 . exon 667878 668954 . - . ID=Thaps8472.1;Parent=Thaps8472;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 673619 674227 . - . ID=Thaps8475;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9L1];external_name=Thaps8475;logic_name=jgi_thaps3 chr10 ensembl transcript 673619 674227 . - . ID=Thaps8475;Parent=Thaps8475;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 673619 674227 . - 0 ID=Thaps8475;Parent=Thaps8475;rank=1 chr10 . exon 673619 674227 . - . ID=Thaps8475.1;Parent=Thaps8475;constitutive=1;rank=1 chr10 . exon 677702 678237 . - . ID=Thaps24206.2;Parent=Thaps24206;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . exon 678334 679528 . - . ID=Thaps24206.1;Parent=Thaps24206;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 680586 684830 . - . ID=Thaps24207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9L3];external_name=Thaps24207;logic_name=jgi_thaps3 chr10 ensembl transcript 680586 684830 . - . ID=Thaps24207;Parent=Thaps24207;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 680586 681986 . - 0 ID=Thaps24207;Parent=Thaps24207;rank=2 chr10 . exon 680586 681986 . - . ID=Thaps24207.2;Parent=Thaps24207;constitutive=1;rank=2 chr10 . CDS 682071 684830 . - 0 ID=Thaps24207;Parent=Thaps24207;rank=1 chr10 . exon 682071 684830 . - . ID=Thaps24207.1;Parent=Thaps24207;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 685591 689527 . + . ID=Thaps36420;biotype=protein_coding;description=DNA topoisomerase 2 [Source:UniProtKB/TrEMBL%3BAcc:B8C9L4];external_name=Thaps36420;logic_name=jgi_thaps3 chr10 ensembl transcript 685591 689527 . + . ID=Thaps36420;Parent=Thaps36420;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 685591 687505 . + 0 ID=Thaps36420;Parent=Thaps36420;rank=1 chr10 . exon 685591 687505 . + . ID=Thaps36420.1;Parent=Thaps36420;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 687599 687637 . + 0 ID=Thaps36420;Parent=Thaps36420;rank=2 chr10 . CDS 687695 688452 . + 0 ID=Thaps36420;Parent=Thaps36420;rank=3 chr10 . CDS 688547 689527 . + 0 ID=Thaps36420;Parent=Thaps36420;rank=4 chr10 . repeat_region 689701 689743 . ? . description=trf chr10 ensembl protein_coding_gene 693610 694065 . - . ID=Thaps18158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9L6];external_name=Thaps18158;logic_name=jgi_thaps3 chr10 ensembl transcript 693610 694065 . - . ID=Thaps18158;Parent=Thaps18158;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 693610 694065 . - 0 ID=Thaps18158;Parent=Thaps18158;rank=1 chr10 . exon 693610 694065 . - . ID=Thaps18158.1;Parent=Thaps18158;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 694604 696216 . + . ID=Thaps269520;biotype=protein_coding;description=Dubious cystathionine gamma-lyase [Source:UniProtKB/TrEMBL%3BAcc:B8C9L7];external_name=CGL1;logic_name=jgi_thaps3 chr10 ensembl transcript 694604 696216 . + . ID=Thaps269520;Parent=Thaps269520;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 694604 694985 . + 0 ID=Thaps269520;Parent=Thaps269520;rank=1 chr10 . exon 694604 694985 . + . ID=Thaps269520.1;Parent=Thaps269520;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 695052 695378 . + 0 ID=Thaps269520;Parent=Thaps269520;rank=2 chr10 . exon 695052 695378 . + . ID=Thaps269520.2;Parent=Thaps269520;constitutive=1;rank=2 chr10 . CDS 695403 695458 . + 0 ID=Thaps269520;Parent=Thaps269520;rank=3 chr10 . exon 695403 695458 . + . ID=Thaps269520.3;Parent=Thaps269520;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 695572 695923 . + 0 ID=Thaps269520;Parent=Thaps269520;rank=4 chr10 . exon 695572 695923 . + . ID=Thaps269520.4;Parent=Thaps269520;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 695963 696216 . + 0 ID=Thaps269520;Parent=Thaps269520;rank=5 chr10 . exon 695963 696216 . + . ID=Thaps269520.5;Parent=Thaps269520;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . exon 687599 687637 . + . ID=Thaps36420.2;Parent=Thaps36420;constitutive=1;rank=2 chr10 . exon 687695 688452 . + . ID=Thaps36420.3;Parent=Thaps36420;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . exon 688547 689527 . + . ID=Thaps36420.4;Parent=Thaps36420;constitutive=1;rank=4 chr10 ensembl protein_coding_gene 690350 693337 . + . ID=Thaps8480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9L5];external_name=Thaps8480;logic_name=jgi_thaps3 chr10 ensembl transcript 690350 693337 . + . ID=Thaps8480;Parent=Thaps8480;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 690350 693337 . + 0 ID=Thaps8480;Parent=Thaps8480;rank=1 chr10 . exon 690350 693337 . + . ID=Thaps8480.1;Parent=Thaps8480;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 696624 697553 . + . ID=Thaps8482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9L8];external_name=Thaps8482;logic_name=jgi_thaps3 chr10 ensembl transcript 696624 697553 . + . ID=Thaps8482;Parent=Thaps8482;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 696624 697029 . + 0 ID=Thaps8482;Parent=Thaps8482;rank=1 chr10 . exon 696624 697029 . + . ID=Thaps8482.1;Parent=Thaps8482;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 697126 697197 . + 0 ID=Thaps8482;Parent=Thaps8482;rank=2 chr10 . exon 697126 697197 . + . ID=Thaps8482.2;Parent=Thaps8482;constitutive=1;rank=2 chr10 . CDS 697303 697553 . + 0 ID=Thaps8482;Parent=Thaps8482;rank=3 chr10 . repeat_region 706155 706164 . ? . description=dust chr10 . repeat_region 706879 706929 . + . description=MuDR1_TP chr10 ensembl protein_coding_gene 697642 700325 . - . ID=Thaps24211;biotype=protein_coding;description=FADH-2%2C4-dienoyl-CoA reductase [Source:UniProtKB/TrEMBL%3BAcc:B8C9L9];external_name=Thaps24211;logic_name=jgi_thaps3 chr10 ensembl transcript 697642 700325 . - . ID=Thaps24211;Parent=Thaps24211;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 697642 698725 . - 0 ID=Thaps24211;Parent=Thaps24211;rank=4 chr10 . exon 697642 698725 . - . ID=Thaps24211.4;Parent=Thaps24211;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 698860 699169 . - 0 ID=Thaps24211;Parent=Thaps24211;rank=3 chr10 . exon 698860 699169 . - . ID=Thaps24211.3;Parent=Thaps24211;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 699247 699897 . - 0 ID=Thaps24211;Parent=Thaps24211;rank=2 chr10 . exon 699247 699897 . - . ID=Thaps24211.2;Parent=Thaps24211;constitutive=1;rank=2 chr10 . CDS 699968 700325 . - 0 ID=Thaps24211;Parent=Thaps24211;rank=1 chr10 . exon 699968 700325 . - . ID=Thaps24211.1;Parent=Thaps24211;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 700723 703341 . - . ID=Thaps24212;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9M0];external_name=Thaps24212;logic_name=jgi_thaps3 chr10 ensembl transcript 700723 703341 . - . ID=Thaps24212;Parent=Thaps24212;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 700723 703341 . - 0 ID=Thaps24212;Parent=Thaps24212;rank=1 chr10 . exon 700723 703341 . - . ID=Thaps24212.1;Parent=Thaps24212;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 703534 705008 . + . ID=Thaps24213;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9M1];external_name=Thaps24213;logic_name=jgi_thaps3 chr10 ensembl transcript 703534 705008 . + . ID=Thaps24213;Parent=Thaps24213;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 703534 703730 . + 0 ID=Thaps24213;Parent=Thaps24213;rank=1 chr10 . exon 703534 703730 . + . ID=Thaps24213.1;Parent=Thaps24213;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 703786 704821 . + 0 ID=Thaps24213;Parent=Thaps24213;rank=2 chr10 . exon 703786 704821 . + . ID=Thaps24213.2;Parent=Thaps24213;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 704967 705008 . + 0 ID=Thaps24213;Parent=Thaps24213;rank=3 chr10 . exon 704967 705008 . + . ID=Thaps24213.3;Parent=Thaps24213;constitutive=1;rank=3 chr10 . exon 697303 697553 . + . ID=Thaps8482.3;Parent=Thaps8482;constitutive=1;ensembl_end_phase=2;rank=3 chr10 ensembl protein_coding_gene 705108 706128 . - . ID=Thaps8486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9M2];external_name=Thaps8486;logic_name=jgi_thaps3 chr10 ensembl transcript 705108 706128 . - . ID=Thaps8486;Parent=Thaps8486;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 705108 705807 . - 0 ID=Thaps8486;Parent=Thaps8486;rank=2 chr10 . exon 705108 705807 . - . ID=Thaps8486.2;Parent=Thaps8486;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 705905 706128 . - 0 ID=Thaps8486;Parent=Thaps8486;rank=1 chr10 . exon 705905 706128 . - . ID=Thaps8486.1;Parent=Thaps8486;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 706687 707458 . - . ID=Thaps8487;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9M3];external_name=Thaps8487;logic_name=jgi_thaps3 chr10 ensembl transcript 706687 707458 . - . ID=Thaps8487;Parent=Thaps8487;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 706687 707040 . - 0 ID=Thaps8487;Parent=Thaps8487;rank=2 chr10 . exon 706687 707040 . - . ID=Thaps8487.2;Parent=Thaps8487;constitutive=1;rank=2 chr10 . CDS 707147 707458 . - 0 ID=Thaps8487;Parent=Thaps8487;rank=1 chr10 . exon 707147 707458 . - . ID=Thaps8487.1;Parent=Thaps8487;constitutive=1;rank=1 chr10 . repeat_region 709336 709362 . ? . description=trf chr10 ensembl protein_coding_gene 709126 710925 . + . ID=Thaps24214;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9M4];external_name=Thaps24214;logic_name=jgi_thaps3 chr10 ensembl transcript 709126 710925 . + . ID=Thaps24214;Parent=Thaps24214;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 709126 709565 . + 0 ID=Thaps24214;Parent=Thaps24214;rank=1 chr10 . exon 709126 709565 . + . ID=Thaps24214.1;Parent=Thaps24214;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 709758 709974 . + 0 ID=Thaps24214;Parent=Thaps24214;rank=2 chr10 . exon 709758 709974 . + . ID=Thaps24214.2;Parent=Thaps24214;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 710022 710593 . + 0 ID=Thaps24214;Parent=Thaps24214;rank=3 chr10 . exon 710022 710593 . + . ID=Thaps24214.3;Parent=Thaps24214;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 710781 710925 . + 0 ID=Thaps24214;Parent=Thaps24214;rank=4 chr10 . exon 710781 710925 . + . ID=Thaps24214.4;Parent=Thaps24214;constitutive=1;ensembl_end_phase=1;rank=4 chr10 ensembl protein_coding_gene 715227 718166 . - . ID=Thaps36372;biotype=protein_coding;description=Serine threonine protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C9M7];external_name=Thaps36372;logic_name=jgi_thaps3 chr10 ensembl transcript 715227 718166 . - . ID=Thaps36372;Parent=Thaps36372;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 715227 715635 . - 0 ID=Thaps36372;Parent=Thaps36372;rank=4 chr10 . exon 715227 715635 . - . ID=Thaps36372.4;Parent=Thaps36372;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 715721 715890 . - 0 ID=Thaps36372;Parent=Thaps36372;rank=3 chr10 . exon 715721 715890 . - . ID=Thaps36372.3;Parent=Thaps36372;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 717049 717973 . - 0 ID=Thaps36372;Parent=Thaps36372;rank=2 chr10 . exon 717049 717973 . - . ID=Thaps36372.2;Parent=Thaps36372;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 718093 718166 . - 0 ID=Thaps36372;Parent=Thaps36372;rank=1 chr10 ensembl protein_coding_gene 711222 713553 . + . ID=Thaps8489;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9M5];external_name=Thaps8489;logic_name=jgi_thaps3 chr10 ensembl transcript 711222 713553 . + . ID=Thaps8489;Parent=Thaps8489;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 711222 711299 . + 0 ID=Thaps8489;Parent=Thaps8489;rank=1 chr10 . exon 711222 711299 . + . ID=Thaps8489.1;Parent=Thaps8489;constitutive=1;rank=1 chr10 . CDS 711390 711892 . + 0 ID=Thaps8489;Parent=Thaps8489;rank=2 chr10 . exon 711390 711892 . + . ID=Thaps8489.2;Parent=Thaps8489;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 712020 712044 . + 0 ID=Thaps8489;Parent=Thaps8489;rank=3 chr10 . exon 712020 712044 . + . ID=Thaps8489.3;Parent=Thaps8489;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 712123 712201 . + 0 ID=Thaps8489;Parent=Thaps8489;rank=4 chr10 . exon 712123 712201 . + . ID=Thaps8489.4;Parent=Thaps8489;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 712275 712760 . + 0 ID=Thaps8489;Parent=Thaps8489;rank=5 chr10 . exon 712275 712760 . + . ID=Thaps8489.5;Parent=Thaps8489;constitutive=1;rank=5 chr10 . CDS 712799 713553 . + 0 ID=Thaps8489;Parent=Thaps8489;rank=6 chr10 . exon 712799 713553 . + . ID=Thaps8489.6;Parent=Thaps8489;constitutive=1;ensembl_end_phase=2;rank=6 chr10 ensembl protein_coding_gene 714102 714952 . + . ID=Thaps8490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9M6];external_name=Thaps8490;logic_name=jgi_thaps3 chr10 ensembl transcript 714102 714952 . + . ID=Thaps8490;Parent=Thaps8490;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 714102 714545 . + 0 ID=Thaps8490;Parent=Thaps8490;rank=1 chr10 . exon 714102 714545 . + . ID=Thaps8490.1;Parent=Thaps8490;constitutive=1;rank=1 chr10 . CDS 714626 714952 . + 0 ID=Thaps8490;Parent=Thaps8490;rank=2 chr10 . exon 714626 714952 . + . ID=Thaps8490.2;Parent=Thaps8490;constitutive=1;rank=2 chr10 . repeat_region 718203 718257 . ? . description=dust chr10 . repeat_region 719286 719299 . ? . description=dust chr10 . repeat_region 723766 723774 . ? . description=dust chr10 ensembl protein_coding_gene 719725 728358 . + . ID=Thaps24216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9M8];external_name=Thaps24216;logic_name=jgi_thaps3 chr10 ensembl transcript 719725 728358 . + . ID=Thaps24216;Parent=Thaps24216;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 719725 720294 . + 0 ID=Thaps24216;Parent=Thaps24216;rank=1 chr10 . exon 719725 720294 . + . ID=Thaps24216.1;Parent=Thaps24216;constitutive=1;rank=1 chr10 . CDS 720444 724239 . + 0 ID=Thaps24216;Parent=Thaps24216;rank=2 chr10 . exon 720444 724239 . + . ID=Thaps24216.2;Parent=Thaps24216;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 724326 726993 . + 0 ID=Thaps24216;Parent=Thaps24216;rank=3 chr10 . exon 724326 726993 . + . ID=Thaps24216.3;Parent=Thaps24216;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 727059 728358 . + 0 ID=Thaps24216;Parent=Thaps24216;rank=4 chr10 . exon 727059 728358 . + . ID=Thaps24216.4;Parent=Thaps24216;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . exon 718093 718166 . - . ID=Thaps36372.1;Parent=Thaps36372;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . repeat_region 730047 730095 . ? . description=trf chr10 . repeat_region 733563 733586 . ? . description=trf chr10 ensembl protein_coding_gene 728427 729440 . - . ID=Thaps24217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9M9];external_name=Thaps24217;logic_name=jgi_thaps3 chr10 ensembl transcript 728427 729440 . - . ID=Thaps24217;Parent=Thaps24217;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 728427 729070 . - 0 ID=Thaps24217;Parent=Thaps24217;rank=2 chr10 . exon 728427 729070 . - . ID=Thaps24217.2;Parent=Thaps24217;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 729125 729440 . - 0 ID=Thaps24217;Parent=Thaps24217;rank=1 chr10 . exon 729125 729440 . - . ID=Thaps24217.1;Parent=Thaps24217;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 729635 731561 . + . ID=Thaps24218;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N0];external_name=Thaps24218;logic_name=jgi_thaps3 chr10 ensembl transcript 729635 731561 . + . ID=Thaps24218;Parent=Thaps24218;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 729635 729784 . + 0 ID=Thaps24218;Parent=Thaps24218;rank=1 chr10 . exon 729635 729784 . + . ID=Thaps24218.1;Parent=Thaps24218;constitutive=1;rank=1 chr10 . CDS 730023 731561 . + 0 ID=Thaps24218;Parent=Thaps24218;rank=2 chr10 . exon 730023 731561 . + . ID=Thaps24218.2;Parent=Thaps24218;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 731616 732666 . - . ID=Thaps263695;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N1];external_name=Thaps263695;logic_name=jgi_thaps3 chr10 ensembl transcript 731616 732666 . - . ID=Thaps263695;Parent=Thaps263695;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 731616 732666 . - 0 ID=Thaps263695;Parent=Thaps263695;rank=1 chr10 . exon 731616 732666 . - . ID=Thaps263695.1;Parent=Thaps263695;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 734601 735224 . + . ID=Thaps36443;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N2];external_name=Thaps36443;logic_name=jgi_thaps3 chr10 ensembl transcript 734601 735224 . + . ID=Thaps36443;Parent=Thaps36443;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 734601 735224 . + 0 ID=Thaps36443;Parent=Thaps36443;rank=1 chr10 . exon 734601 735224 . + . ID=Thaps36443.1;Parent=Thaps36443;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 740060 741118 . - . ID=Thaps36419;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N5];external_name=Thaps36419;logic_name=jgi_thaps3 chr10 ensembl transcript 740060 741118 . - . ID=Thaps36419;Parent=Thaps36419;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 740060 740176 . - 0 ID=Thaps36419;Parent=Thaps36419;rank=2 chr10 . exon 740060 740176 . - . ID=Thaps36419.2;Parent=Thaps36419;constitutive=1;rank=2 chr10 . CDS 740255 741118 . - 0 ID=Thaps36419;Parent=Thaps36419;rank=1 chr10 . exon 740255 741118 . - . ID=Thaps36419.1;Parent=Thaps36419;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 738105 738671 . - . ID=Thaps8497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N3];external_name=Thaps8497;logic_name=jgi_thaps3 chr10 ensembl transcript 738105 738671 . - . ID=Thaps8497;Parent=Thaps8497;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 738105 738671 . - 0 ID=Thaps8497;Parent=Thaps8497;rank=1 chr10 . exon 738105 738671 . - . ID=Thaps8497.1;Parent=Thaps8497;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 739290 739940 . + . ID=Thaps8498;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N4];external_name=Thaps8498;logic_name=jgi_thaps3 chr10 ensembl transcript 739290 739940 . + . ID=Thaps8498;Parent=Thaps8498;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 739290 739511 . + 0 ID=Thaps8498;Parent=Thaps8498;rank=1 chr10 . exon 739290 739511 . + . ID=Thaps8498.1;Parent=Thaps8498;constitutive=1;rank=1 chr10 . CDS 739614 739940 . + 0 ID=Thaps8498;Parent=Thaps8498;rank=2 chr10 . exon 739614 739940 . + . ID=Thaps8498.2;Parent=Thaps8498;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 742094 743997 . + . ID=Thaps8500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N6];external_name=Thaps8500;logic_name=jgi_thaps3 chr10 ensembl transcript 742094 743997 . + . ID=Thaps8500;Parent=Thaps8500;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 742094 742189 . + 0 ID=Thaps8500;Parent=Thaps8500;rank=1 chr10 . exon 742094 742189 . + . ID=Thaps8500.1;Parent=Thaps8500;constitutive=1;rank=1 chr10 . CDS 742374 742560 . + 0 ID=Thaps8500;Parent=Thaps8500;rank=2 chr10 . exon 742374 742560 . + . ID=Thaps8500.2;Parent=Thaps8500;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 742829 743997 . + 0 ID=Thaps8500;Parent=Thaps8500;rank=3 chr10 . exon 742829 743997 . + . ID=Thaps8500.3;Parent=Thaps8500;constitutive=1;ensembl_end_phase=2;rank=3 chr10 ensembl protein_coding_gene 744076 745245 . - . ID=Thaps8501;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N7];external_name=Thaps8501;logic_name=jgi_thaps3 chr10 ensembl transcript 744076 745245 . - . ID=Thaps8501;Parent=Thaps8501;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 744076 745245 . - 0 ID=Thaps8501;Parent=Thaps8501;rank=1 chr10 . exon 744076 745245 . - . ID=Thaps8501.1;Parent=Thaps8501;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 746926 747372 . + . ID=Thaps8502;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N8];external_name=Thaps8502;logic_name=jgi_thaps3 chr10 ensembl transcript 746926 747372 . + . ID=Thaps8502;Parent=Thaps8502;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 746926 747372 . + 0 ID=Thaps8502;Parent=Thaps8502;rank=1 chr10 . exon 746926 747372 . + . ID=Thaps8502.1;Parent=Thaps8502;constitutive=1;rank=1 chr10 . repeat_region 748797 748832 . ? . description=trf chr10 . repeat_region 748797 748832 . ? . description=dust chr10 ensembl protein_coding_gene 755158 755682 . - . ID=Thaps36407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9P2];external_name=Thaps36407;logic_name=jgi_thaps3 chr10 ensembl transcript 755158 755682 . - . ID=Thaps36407;Parent=Thaps36407;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 755158 755682 . - 0 ID=Thaps36407;Parent=Thaps36407;rank=1 chr10 . exon 755158 755682 . - . ID=Thaps36407.1;Parent=Thaps36407;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 749384 753213 . + . ID=Thaps36522;biotype=protein_coding;description=DNA topoisomerase 2 [Source:UniProtKB/TrEMBL%3BAcc:B8C9P0];external_name=TOP2;logic_name=jgi_thaps3 chr10 ensembl transcript 749384 753213 . + . ID=Thaps36522;Parent=Thaps36522;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 749384 750638 . + 0 ID=Thaps36522;Parent=Thaps36522;rank=1 chr10 . exon 749384 750638 . + . ID=Thaps36522.1;Parent=Thaps36522;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 750725 751288 . + 0 ID=Thaps36522;Parent=Thaps36522;rank=2 chr10 . exon 750725 751288 . + . ID=Thaps36522.2;Parent=Thaps36522;constitutive=1;rank=2 chr10 . CDS 751357 751410 . + 0 ID=Thaps36522;Parent=Thaps36522;rank=3 chr10 . exon 751357 751410 . + . ID=Thaps36522.3;Parent=Thaps36522;constitutive=1;rank=3 chr10 . CDS 751477 752231 . + 0 ID=Thaps36522;Parent=Thaps36522;rank=4 chr10 . exon 751477 752231 . + . ID=Thaps36522.4;Parent=Thaps36522;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 752326 753213 . + 0 ID=Thaps36522;Parent=Thaps36522;rank=5 chr10 . exon 752326 753213 . + . ID=Thaps36522.5;Parent=Thaps36522;constitutive=1;rank=5 chr10 ensembl protein_coding_gene 754111 755001 . - . ID=Thaps36525;biotype=protein_coding;description=N-(5'-phosphoribosyl)anthranilate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8C9P1];external_name=Thaps36525;logic_name=jgi_thaps3 chr10 ensembl transcript 754111 755001 . - . ID=Thaps36525;Parent=Thaps36525;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 754111 755001 . - 0 ID=Thaps36525;Parent=Thaps36525;rank=1 chr10 . exon 754111 755001 . - . ID=Thaps36525.1;Parent=Thaps36525;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 747497 748735 . - . ID=Thaps8503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9N9];external_name=Thaps8503;logic_name=jgi_thaps3 chr10 ensembl transcript 747497 748735 . - . ID=Thaps8503;Parent=Thaps8503;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 747497 748735 . - 0 ID=Thaps8503;Parent=Thaps8503;rank=1 chr10 . exon 747497 748735 . - . ID=Thaps8503.1;Parent=Thaps8503;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 756228 759282 . + . ID=Thaps8506;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9P3];external_name=Thaps8506;logic_name=jgi_thaps3 chr10 ensembl transcript 756228 759282 . + . ID=Thaps8506;Parent=Thaps8506;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 756228 756314 . + 0 ID=Thaps8506;Parent=Thaps8506;rank=1 chr10 . exon 756228 756314 . + . ID=Thaps8506.1;Parent=Thaps8506;constitutive=1;rank=1 chr10 . CDS 757154 757589 . + 0 ID=Thaps8506;Parent=Thaps8506;rank=2 chr10 . CDS 757686 757742 . + 0 ID=Thaps8506;Parent=Thaps8506;rank=3 chr10 . CDS 757823 757990 . + 0 ID=Thaps8506;Parent=Thaps8506;rank=4 chr10 . CDS 758190 758468 . + 0 ID=Thaps8506;Parent=Thaps8506;rank=5 chr10 . CDS 758688 758741 . + 0 ID=Thaps8506;Parent=Thaps8506;rank=6 chr10 . CDS 758963 759008 . + 0 ID=Thaps8506;Parent=Thaps8506;rank=7 chr10 . CDS 759105 759282 . + 0 ID=Thaps8506;Parent=Thaps8506;rank=8 chr10 ensembl protein_coding_gene 762394 764569 . + . ID=Thaps24220;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9P5];external_name=Thaps24220;logic_name=jgi_thaps3 chr10 ensembl transcript 762394 764569 . + . ID=Thaps24220;Parent=Thaps24220;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 762394 762849 . + 0 ID=Thaps24220;Parent=Thaps24220;rank=1 chr10 . exon 762394 762849 . + . ID=Thaps24220.1;Parent=Thaps24220;constitutive=1;rank=1 chr10 . CDS 763253 763718 . + 0 ID=Thaps24220;Parent=Thaps24220;rank=2 chr10 . exon 763253 763718 . + . ID=Thaps24220.2;Parent=Thaps24220;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 763815 764569 . + 0 ID=Thaps24220;Parent=Thaps24220;rank=3 chr10 . exon 763815 764569 . + . ID=Thaps24220.3;Parent=Thaps24220;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . exon 757154 757589 . + . ID=Thaps8506.2;Parent=Thaps8506;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . exon 757686 757742 . + . ID=Thaps8506.3;Parent=Thaps8506;constitutive=1;rank=3 chr10 . exon 757823 757990 . + . ID=Thaps8506.4;Parent=Thaps8506;constitutive=1;rank=4 chr10 . exon 758190 758468 . + . ID=Thaps8506.5;Parent=Thaps8506;constitutive=1;rank=5 chr10 . exon 758688 758741 . + . ID=Thaps8506.6;Parent=Thaps8506;constitutive=1;rank=6 chr10 . exon 758963 759008 . + . ID=Thaps8506.7;Parent=Thaps8506;constitutive=1;ensembl_end_phase=1;rank=7 chr10 . exon 759105 759282 . + . ID=Thaps8506.8;Parent=Thaps8506;constitutive=1;ensembl_end_phase=1;rank=8 chr10 ensembl protein_coding_gene 759647 762099 . + . ID=Thaps8507;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9P4];external_name=Thaps8507;logic_name=jgi_thaps3 chr10 ensembl transcript 759647 762099 . + . ID=Thaps8507;Parent=Thaps8507;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 759647 760838 . + 0 ID=Thaps8507;Parent=Thaps8507;rank=1 chr10 . exon 759647 760838 . + . ID=Thaps8507.1;Parent=Thaps8507;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 760864 761498 . + 0 ID=Thaps8507;Parent=Thaps8507;rank=2 chr10 . exon 760864 761498 . + . ID=Thaps8507.2;Parent=Thaps8507;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 761584 761709 . + 0 ID=Thaps8507;Parent=Thaps8507;rank=3 chr10 . exon 761584 761709 . + . ID=Thaps8507.3;Parent=Thaps8507;constitutive=1;rank=3 chr10 . CDS 761806 762099 . + 0 ID=Thaps8507;Parent=Thaps8507;rank=4 chr10 . exon 761806 762099 . + . ID=Thaps8507.4;Parent=Thaps8507;constitutive=1;rank=4 chr10 ensembl protein_coding_gene 765202 766233 . - . ID=Thaps8509;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9P6];external_name=Thaps8509;logic_name=jgi_thaps3 chr10 ensembl transcript 765202 766233 . - . ID=Thaps8509;Parent=Thaps8509;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 765202 766233 . - 0 ID=Thaps8509;Parent=Thaps8509;rank=1 chr10 . exon 765202 766233 . - . ID=Thaps8509.1;Parent=Thaps8509;constitutive=1;rank=1 chr10 . repeat_region 770964 770984 . ? . description=trf chr10 . repeat_region 770964 771001 . ? . description=dust chr10 . repeat_region 776007 776029 . ? . description=trf chr10 . repeat_region 776007 776029 . ? . description=dust chr10 ensembl protein_coding_gene 771149 771955 . - . ID=Thaps17511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9P9];external_name=Thaps17511;logic_name=jgi_thaps3 chr10 ensembl transcript 771149 771955 . - . ID=Thaps17511;Parent=Thaps17511;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 771149 771607 . - 0 ID=Thaps17511;Parent=Thaps17511;rank=3 chr10 . exon 771149 771607 . - . ID=Thaps17511.3;Parent=Thaps17511;constitutive=1;rank=3 chr10 . CDS 771653 771715 . - 0 ID=Thaps17511;Parent=Thaps17511;rank=2 chr10 . exon 771653 771715 . - . ID=Thaps17511.2;Parent=Thaps17511;constitutive=1;rank=2 chr10 . CDS 771779 771955 . - 0 ID=Thaps17511;Parent=Thaps17511;rank=1 chr10 . exon 771779 771955 . - . ID=Thaps17511.1;Parent=Thaps17511;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 776740 777558 . - . ID=Thaps263700;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q3];external_name=Thaps263700;logic_name=jgi_thaps3 chr10 ensembl transcript 776740 777558 . - . ID=Thaps263700;Parent=Thaps263700;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 776740 777234 . - 0 ID=Thaps263700;Parent=Thaps263700;rank=2 chr10 . exon 776740 777234 . - . ID=Thaps263700.2;Parent=Thaps263700;constitutive=1;rank=2 chr10 . CDS 777394 777558 . - 0 ID=Thaps263700;Parent=Thaps263700;rank=1 chr10 ensembl protein_coding_gene 773322 774752 . + . ID=Thaps29496;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q0];external_name=Thaps29496;logic_name=jgi_thaps3 chr10 ensembl transcript 773322 774752 . + . ID=Thaps29496;Parent=Thaps29496;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 773322 774444 . + 0 ID=Thaps29496;Parent=Thaps29496;rank=1 chr10 . exon 773322 774444 . + . ID=Thaps29496.1;Parent=Thaps29496;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 774532 774752 . + 0 ID=Thaps29496;Parent=Thaps29496;rank=2 chr10 . exon 774532 774752 . + . ID=Thaps29496.2;Parent=Thaps29496;constitutive=1;ensembl_end_phase=2;rank=2 chr10 ensembl protein_coding_gene 767359 768363 . + . ID=Thaps8510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9P7];external_name=Thaps8510;logic_name=jgi_thaps3 chr10 ensembl transcript 767359 768363 . + . ID=Thaps8510;Parent=Thaps8510;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 767359 768363 . + 0 ID=Thaps8510;Parent=Thaps8510;rank=1 chr10 . exon 767359 768363 . + . ID=Thaps8510.1;Parent=Thaps8510;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 768875 769906 . - . ID=Thaps8511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9P8];external_name=Thaps8511;logic_name=jgi_thaps3 chr10 ensembl transcript 768875 769906 . - . ID=Thaps8511;Parent=Thaps8511;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 768875 769906 . - 0 ID=Thaps8511;Parent=Thaps8511;rank=1 chr10 . exon 768875 769906 . - . ID=Thaps8511.1;Parent=Thaps8511;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 774929 775477 . - . ID=Thaps8514;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q1];external_name=Thaps8514;logic_name=jgi_thaps3 chr10 ensembl transcript 774929 775477 . - . ID=Thaps8514;Parent=Thaps8514;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 774929 775477 . - 0 ID=Thaps8514;Parent=Thaps8514;rank=1 chr10 . exon 774929 775477 . - . ID=Thaps8514.1;Parent=Thaps8514;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 775816 776406 . + . ID=Thaps8515;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q2];external_name=Thaps8515;logic_name=jgi_thaps3 chr10 ensembl transcript 775816 776406 . + . ID=Thaps8515;Parent=Thaps8515;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 775816 776406 . + 0 ID=Thaps8515;Parent=Thaps8515;rank=1 chr10 . exon 775816 776406 . + . ID=Thaps8515.1;Parent=Thaps8515;constitutive=1;rank=1 chr10 . exon 777394 777558 . - . ID=Thaps263700.1;Parent=Thaps263700;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 779478 780135 . + . ID=Thaps263701;biotype=protein_coding;description=Dolichol kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q4];external_name=Thaps263701;logic_name=jgi_thaps3 chr10 ensembl transcript 779478 780135 . + . ID=Thaps263701;Parent=Thaps263701;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 779478 779622 . + 0 ID=Thaps263701;Parent=Thaps263701;rank=1 chr10 . exon 779478 779622 . + . ID=Thaps263701.1;Parent=Thaps263701;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 779644 780135 . + 0 ID=Thaps263701;Parent=Thaps263701;rank=2 chr10 . exon 779644 780135 . + . ID=Thaps263701.2;Parent=Thaps263701;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 780336 782007 . - . ID=Thaps263702;biotype=protein_coding;description=Cobyrinic acid synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q5];external_name=Thaps263702;logic_name=jgi_thaps3 chr10 ensembl transcript 780336 782007 . - . ID=Thaps263702;Parent=Thaps263702;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 780336 781006 . - 0 ID=Thaps263702;Parent=Thaps263702;rank=5 chr10 . exon 780336 781006 . - . ID=Thaps263702.5;Parent=Thaps263702;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . CDS 781037 781552 . - 0 ID=Thaps263702;Parent=Thaps263702;rank=4 chr10 . exon 781037 781552 . - . ID=Thaps263702.4;Parent=Thaps263702;constitutive=1;rank=4 chr10 . CDS 781633 781699 . - 0 ID=Thaps263702;Parent=Thaps263702;rank=3 chr10 . exon 781633 781699 . - . ID=Thaps263702.3;Parent=Thaps263702;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 781766 781883 . - 0 ID=Thaps263702;Parent=Thaps263702;rank=2 chr10 . exon 781766 781883 . - . ID=Thaps263702.2;Parent=Thaps263702;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 781974 782007 . - 0 ID=Thaps263702;Parent=Thaps263702;rank=1 chr10 . exon 781974 782007 . - . ID=Thaps263702.1;Parent=Thaps263702;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 782850 783737 . + . ID=Thaps8517;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q6];external_name=Thaps8517;logic_name=jgi_thaps3 chr10 ensembl transcript 782850 783737 . + . ID=Thaps8517;Parent=Thaps8517;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 782850 783737 . + 0 ID=Thaps8517;Parent=Thaps8517;rank=1 chr10 . exon 782850 783737 . + . ID=Thaps8517.1;Parent=Thaps8517;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 784603 789729 . + . ID=Thaps8518;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q7];external_name=Thaps8518;logic_name=jgi_thaps3 chr10 ensembl transcript 784603 789729 . + . ID=Thaps8518;Parent=Thaps8518;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 784603 788054 . + 0 ID=Thaps8518;Parent=Thaps8518;rank=1 chr10 . exon 784603 788054 . + . ID=Thaps8518.1;Parent=Thaps8518;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 788135 788411 . + 0 ID=Thaps8518;Parent=Thaps8518;rank=2 chr10 . CDS 788498 788731 . + 0 ID=Thaps8518;Parent=Thaps8518;rank=3 chr10 . CDS 788817 789003 . + 0 ID=Thaps8518;Parent=Thaps8518;rank=4 chr10 . CDS 789095 789729 . + 0 ID=Thaps8518;Parent=Thaps8518;rank=5 chr10 . repeat_region 792303 792315 . ? . description=dust chr10 ensembl protein_coding_gene 794585 795705 . - . ID=Thaps26366;biotype=protein_coding;description=Oxoglutarate/malate translocator [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q9];external_name=Thaps26366;logic_name=jgi_thaps3 chr10 ensembl transcript 794585 795705 . - . ID=Thaps26366;Parent=Thaps26366;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 794585 794851 . - 0 ID=Thaps26366;Parent=Thaps26366;rank=3 chr10 . exon 794585 794851 . - . ID=Thaps26366.3;Parent=Thaps26366;constitutive=1;rank=3 chr10 . CDS 794945 795145 . - 0 ID=Thaps26366;Parent=Thaps26366;rank=2 chr10 . exon 794945 795145 . - . ID=Thaps26366.2;Parent=Thaps26366;constitutive=1;rank=2 chr10 . CDS 795238 795705 . - 0 ID=Thaps26366;Parent=Thaps26366;rank=1 chr10 . exon 795238 795705 . - . ID=Thaps26366.1;Parent=Thaps26366;constitutive=1;rank=1 chr10 . exon 788135 788411 . + . ID=Thaps8518.2;Parent=Thaps8518;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . exon 788498 788731 . + . ID=Thaps8518.3;Parent=Thaps8518;constitutive=1;rank=3 chr10 . exon 788817 789003 . + . ID=Thaps8518.4;Parent=Thaps8518;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . exon 789095 789729 . + . ID=Thaps8518.5;Parent=Thaps8518;constitutive=1;ensembl_end_phase=2;rank=5 chr10 ensembl protein_coding_gene 790040 790486 . - . ID=Thaps8519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Q8];external_name=Thaps8519;logic_name=jgi_thaps3 chr10 ensembl transcript 790040 790486 . - . ID=Thaps8519;Parent=Thaps8519;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 790040 790486 . - 0 ID=Thaps8519;Parent=Thaps8519;rank=1 chr10 . exon 790040 790486 . - . ID=Thaps8519.1;Parent=Thaps8519;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 796607 797920 . + . ID=Thaps8521;biotype=protein_coding;description=Pseudouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C9R0];external_name=Thaps8521;logic_name=jgi_thaps3 chr10 ensembl transcript 796607 797920 . + . ID=Thaps8521;Parent=Thaps8521;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 796607 797920 . + 0 ID=Thaps8521;Parent=Thaps8521;rank=1 chr10 . exon 796607 797920 . + . ID=Thaps8521.1;Parent=Thaps8521;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 798406 799299 . - . ID=Thaps8522;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9R1];external_name=Thaps8522;logic_name=jgi_thaps3 chr10 ensembl transcript 798406 799299 . - . ID=Thaps8522;Parent=Thaps8522;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 798406 799299 . - 0 ID=Thaps8522;Parent=Thaps8522;rank=1 chr10 . exon 798406 799299 . - . ID=Thaps8522.1;Parent=Thaps8522;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 799468 801458 . + . ID=Thaps8523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9R2];external_name=Thaps8523;logic_name=jgi_thaps3 chr10 ensembl transcript 799468 801458 . + . ID=Thaps8523;Parent=Thaps8523;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 799468 799912 . + 0 ID=Thaps8523;Parent=Thaps8523;rank=1 chr10 . exon 799468 799912 . + . ID=Thaps8523.1;Parent=Thaps8523;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 800034 800073 . + 0 ID=Thaps8523;Parent=Thaps8523;rank=2 chr10 . exon 800034 800073 . + . ID=Thaps8523.2;Parent=Thaps8523;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 800351 801458 . + 0 ID=Thaps8523;Parent=Thaps8523;rank=3 chr10 . exon 800351 801458 . + . ID=Thaps8523.3;Parent=Thaps8523;constitutive=1;ensembl_end_phase=1;rank=3 chr10 ensembl protein_coding_gene 802857 806613 . + . ID=Thaps8524;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9R3];external_name=Thaps8524;logic_name=jgi_thaps3 chr10 ensembl transcript 802857 806613 . + . ID=Thaps8524;Parent=Thaps8524;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 802857 803096 . + 0 ID=Thaps8524;Parent=Thaps8524;rank=1 chr10 . exon 802857 803096 . + . ID=Thaps8524.1;Parent=Thaps8524;constitutive=1;rank=1 chr10 . CDS 803212 803364 . + 0 ID=Thaps8524;Parent=Thaps8524;rank=2 chr10 . exon 803212 803364 . + . ID=Thaps8524.2;Parent=Thaps8524;constitutive=1;rank=2 chr10 . CDS 803447 804728 . + 0 ID=Thaps8524;Parent=Thaps8524;rank=3 chr10 . exon 803447 804728 . + . ID=Thaps8524.3;Parent=Thaps8524;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 804827 804877 . + 0 ID=Thaps8524;Parent=Thaps8524;rank=4 chr10 . exon 804827 804877 . + . ID=Thaps8524.4;Parent=Thaps8524;constitutive=1;rank=4 chr10 . CDS 804967 805598 . + 0 ID=Thaps8524;Parent=Thaps8524;rank=5 chr10 . exon 804967 805598 . + . ID=Thaps8524.5;Parent=Thaps8524;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . CDS 805684 806173 . + 0 ID=Thaps8524;Parent=Thaps8524;rank=6 chr10 . exon 805684 806173 . + . ID=Thaps8524.6;Parent=Thaps8524;constitutive=1;ensembl_end_phase=1;rank=6 chr10 . CDS 806246 806613 . + 0 ID=Thaps8524;Parent=Thaps8524;rank=7 chr10 . exon 806246 806613 . + . ID=Thaps8524.7;Parent=Thaps8524;constitutive=1;ensembl_end_phase=2;rank=7 chr10 . repeat_region 813140 813158 . ? . description=dust chr10 . repeat_region 815624 815729 . + . description=TE1A_TP chr10 . repeat_region 815727 815834 . + . description=TE1A_TP chr10 . repeat_region 815841 815910 . + . description=Harbinger3_TP chr10 . repeat_region 815902 816368 . + . description=tp9_ASNotSingleton chr10 ensembl protein_coding_gene 806862 808079 . - . ID=Thaps24224;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9R4];external_name=Thaps24224;logic_name=jgi_thaps3 chr10 ensembl transcript 806862 808079 . - . ID=Thaps24224;Parent=Thaps24224;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 806862 808079 . - 0 ID=Thaps24224;Parent=Thaps24224;rank=1 chr10 . exon 806862 808079 . - . ID=Thaps24224.1;Parent=Thaps24224;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 814695 815189 . - . ID=Thaps24225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9R8];external_name=Thaps24225;logic_name=jgi_thaps3 chr10 ensembl transcript 814695 815189 . - . ID=Thaps24225;Parent=Thaps24225;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 814695 815189 . - 0 ID=Thaps24225;Parent=Thaps24225;rank=1 chr10 . exon 814695 815189 . - . ID=Thaps24225.1;Parent=Thaps24225;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 816660 817785 . - . ID=Thaps24226;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9R9];external_name=Thaps24226;logic_name=jgi_thaps3 chr10 ensembl transcript 816660 817785 . - . ID=Thaps24226;Parent=Thaps24226;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 816660 816745 . - 0 ID=Thaps24226;Parent=Thaps24226;rank=2 chr10 . exon 816660 816745 . - . ID=Thaps24226.2;Parent=Thaps24226;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 816855 817785 . - 0 ID=Thaps24226;Parent=Thaps24226;rank=1 chr10 ensembl protein_coding_gene 808443 810823 . + . ID=Thaps8526;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9R5];external_name=Thaps8526;logic_name=jgi_thaps3 chr10 ensembl transcript 808443 810823 . + . ID=Thaps8526;Parent=Thaps8526;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 808443 809932 . + 0 ID=Thaps8526;Parent=Thaps8526;rank=1 chr10 . exon 808443 809932 . + . ID=Thaps8526.1;Parent=Thaps8526;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 810010 810823 . + 0 ID=Thaps8526;Parent=Thaps8526;rank=2 chr10 . exon 810010 810823 . + . ID=Thaps8526.2;Parent=Thaps8526;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 810862 812550 . - . ID=Thaps8527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9R6];external_name=Thaps8527;logic_name=jgi_thaps3 chr10 ensembl transcript 810862 812550 . - . ID=Thaps8527;Parent=Thaps8527;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 810862 812550 . - 0 ID=Thaps8527;Parent=Thaps8527;rank=1 chr10 . exon 810862 812550 . - . ID=Thaps8527.1;Parent=Thaps8527;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 813243 813766 . + . ID=Thaps8528;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9R7];external_name=Thaps8528;logic_name=jgi_thaps3 chr10 ensembl transcript 813243 813766 . + . ID=Thaps8528;Parent=Thaps8528;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 813243 813375 . + 0 ID=Thaps8528;Parent=Thaps8528;rank=1 chr10 . exon 813243 813375 . + . ID=Thaps8528.1;Parent=Thaps8528;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 813468 813766 . + 0 ID=Thaps8528;Parent=Thaps8528;rank=2 chr10 . exon 813468 813766 . + . ID=Thaps8528.2;Parent=Thaps8528;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . repeat_region 818709 818917 . - . description=Gypsy1ALTR_TP chr10 . repeat_region 818918 820280 . - . description=Gypsy1I_TP chr10 . repeat_region 820261 821770 . - . description=Gypsy1I_TP chr10 . repeat_region 821771 821971 . - . description=Gypsy1ALTR_TP chr10 . repeat_region 822025 822258 . - . description=Harbinger4_TP chr10 . repeat_region 822352 822381 . ? . description=trf chr10 . repeat_region 822931 823034 . ? . description=trf chr10 . exon 816855 817785 . - . ID=Thaps24226.1;Parent=Thaps24226;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 823011 824387 . - . ID=Thaps24227;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9S0];external_name=Thaps24227;logic_name=jgi_thaps3 chr10 ensembl transcript 823011 824387 . - . ID=Thaps24227;Parent=Thaps24227;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 823011 824387 . - 0 ID=Thaps24227;Parent=Thaps24227;rank=1 chr10 . exon 823011 824387 . - . ID=Thaps24227.1;Parent=Thaps24227;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 825510 826070 . + . ID=Thaps36506;biotype=protein_coding;description=Pseudouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C9S1];external_name=Thaps36506;logic_name=jgi_thaps3 chr10 ensembl transcript 825510 826070 . + . ID=Thaps36506;Parent=Thaps36506;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 825510 825719 . + 0 ID=Thaps36506;Parent=Thaps36506;rank=1 chr10 . exon 825510 825719 . + . ID=Thaps36506.1;Parent=Thaps36506;constitutive=1;rank=1 chr10 . CDS 825795 826070 . + 0 ID=Thaps36506;Parent=Thaps36506;rank=2 chr10 . exon 825795 826070 . + . ID=Thaps36506.2;Parent=Thaps36506;constitutive=1;rank=2 chr10 . repeat_region 827798 827806 . ? . description=dust chr10 ensembl protein_coding_gene 828361 829194 . - . ID=Thaps36367;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9S3];external_name=Thaps36367;logic_name=jgi_thaps3 chr10 ensembl transcript 828361 829194 . - . ID=Thaps36367;Parent=Thaps36367;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 828361 828632 . - 0 ID=Thaps36367;Parent=Thaps36367;rank=2 chr10 . exon 828361 828632 . - . ID=Thaps36367.2;Parent=Thaps36367;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 828678 829194 . - 0 ID=Thaps36367;Parent=Thaps36367;rank=1 chr10 . exon 828678 829194 . - . ID=Thaps36367.1;Parent=Thaps36367;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 827160 828131 . - . ID=Thaps8533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9S2];external_name=Thaps8533;logic_name=jgi_thaps3 chr10 ensembl transcript 827160 828131 . - . ID=Thaps8533;Parent=Thaps8533;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 827160 827399 . - 0 ID=Thaps8533;Parent=Thaps8533;rank=5 chr10 . exon 827160 827399 . - . ID=Thaps8533.5;Parent=Thaps8533;constitutive=1;rank=5 chr10 . CDS 827518 827544 . - 0 ID=Thaps8533;Parent=Thaps8533;rank=4 chr10 . exon 827518 827544 . - . ID=Thaps8533.4;Parent=Thaps8533;constitutive=1;rank=4 chr10 . CDS 827630 827777 . - 0 ID=Thaps8533;Parent=Thaps8533;rank=3 chr10 . exon 827630 827777 . - . ID=Thaps8533.3;Parent=Thaps8533;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 827872 827950 . - 0 ID=Thaps8533;Parent=Thaps8533;rank=2 chr10 . exon 827872 827950 . - . ID=Thaps8533.2;Parent=Thaps8533;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 827990 828131 . - 0 ID=Thaps8533;Parent=Thaps8533;rank=1 chr10 . exon 827990 828131 . - . ID=Thaps8533.1;Parent=Thaps8533;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 830250 834667 . + . ID=Thaps8535;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9S4];external_name=Thaps8535;logic_name=jgi_thaps3 chr10 ensembl transcript 830250 834667 . + . ID=Thaps8535;Parent=Thaps8535;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 830250 831392 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=1 chr10 . exon 830250 831392 . + . ID=Thaps8535.1;Parent=Thaps8535;constitutive=1;rank=1 chr10 . CDS 831515 831655 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=2 chr10 . exon 831515 831655 . + . ID=Thaps8535.2;Parent=Thaps8535;constitutive=1;rank=2 chr10 . CDS 831738 831780 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=3 chr10 . exon 831738 831780 . + . ID=Thaps8535.3;Parent=Thaps8535;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 831876 831948 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=4 chr10 . exon 831876 831948 . + . ID=Thaps8535.4;Parent=Thaps8535;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 832019 832288 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=5 chr10 . exon 832019 832288 . + . ID=Thaps8535.5;Parent=Thaps8535;constitutive=1;rank=5 chr10 . CDS 832376 833426 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=6 chr10 . exon 832376 833426 . + . ID=Thaps8535.6;Parent=Thaps8535;constitutive=1;ensembl_end_phase=1;rank=6 chr10 . CDS 833476 833556 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=7 chr10 . exon 833476 833556 . + . ID=Thaps8535.7;Parent=Thaps8535;constitutive=1;rank=7 chr10 . CDS 833618 833757 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=8 chr10 . exon 833618 833757 . + . ID=Thaps8535.8;Parent=Thaps8535;constitutive=1;ensembl_end_phase=2;rank=8 chr10 . CDS 833825 834079 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=9 chr10 . exon 833825 834079 . + . ID=Thaps8535.9;Parent=Thaps8535;constitutive=1;rank=9 chr10 . CDS 834172 834667 . + 0 ID=Thaps8535;Parent=Thaps8535;rank=10 chr10 . exon 834172 834667 . + . ID=Thaps8535.10;Parent=Thaps8535;constitutive=1;ensembl_end_phase=1;rank=10 chr10 ensembl protein_coding_gene 834774 840915 . - . ID=Thaps8536;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9S5];external_name=Thaps8536;logic_name=jgi_thaps3 chr10 ensembl transcript 834774 840915 . - . ID=Thaps8536;Parent=Thaps8536;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 834774 835454 . - 0 ID=Thaps8536;Parent=Thaps8536;rank=6 chr10 . exon 834774 835454 . - . ID=Thaps8536.6;Parent=Thaps8536;constitutive=1;rank=6 chr10 . CDS 835544 835942 . - 0 ID=Thaps8536;Parent=Thaps8536;rank=5 chr10 . exon 835544 835942 . - . ID=Thaps8536.5;Parent=Thaps8536;constitutive=1;rank=5 chr10 . CDS 836023 837352 . - 0 ID=Thaps8536;Parent=Thaps8536;rank=4 chr10 . exon 836023 837352 . - . ID=Thaps8536.4;Parent=Thaps8536;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 837445 838197 . - 0 ID=Thaps8536;Parent=Thaps8536;rank=3 chr10 . CDS 838276 840787 . - 0 ID=Thaps8536;Parent=Thaps8536;rank=2 chr10 . CDS 840852 840915 . - 0 ID=Thaps8536;Parent=Thaps8536;rank=1 chr10 . repeat_region 846221 846259 . ? . description=trf chr10 ensembl protein_coding_gene 845810 846316 . + . ID=Thaps19106;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9S8];external_name=Thaps19106;logic_name=jgi_thaps3 chr10 ensembl transcript 845810 846316 . + . ID=Thaps19106;Parent=Thaps19106;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 845810 846316 . + 0 ID=Thaps19106;Parent=Thaps19106;rank=1 chr10 . exon 845810 846316 . + . ID=Thaps19106.1;Parent=Thaps19106;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 843903 845048 . - . ID=Thaps263707;biotype=protein_coding;description=Mitochondrial carrier [Source:UniProtKB/TrEMBL%3BAcc:B8C9S7];external_name=Thaps263707;logic_name=jgi_thaps3 chr10 ensembl transcript 843903 845048 . - . ID=Thaps263707;Parent=Thaps263707;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 843903 844152 . - 0 ID=Thaps263707;Parent=Thaps263707;rank=4 chr10 . exon 843903 844152 . - . ID=Thaps263707.4;Parent=Thaps263707;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 844262 844401 . - 0 ID=Thaps263707;Parent=Thaps263707;rank=3 chr10 . exon 844262 844401 . - . ID=Thaps263707.3;Parent=Thaps263707;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 844505 844645 . - 0 ID=Thaps263707;Parent=Thaps263707;rank=2 chr10 . exon 844505 844645 . - . ID=Thaps263707.2;Parent=Thaps263707;constitutive=1;rank=2 chr10 . CDS 844752 845048 . - 0 ID=Thaps263707;Parent=Thaps263707;rank=1 chr10 . exon 844752 845048 . - . ID=Thaps263707.1;Parent=Thaps263707;constitutive=1;rank=1 chr10 . exon 837445 838197 . - . ID=Thaps8536.3;Parent=Thaps8536;constitutive=1;rank=3 chr10 . exon 838276 840787 . - . ID=Thaps8536.2;Parent=Thaps8536;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . exon 840852 840915 . - . ID=Thaps8536.1;Parent=Thaps8536;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 841576 843057 . - . ID=Thaps8537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9S6];external_name=Thaps8537;logic_name=jgi_thaps3 chr10 ensembl transcript 841576 843057 . - . ID=Thaps8537;Parent=Thaps8537;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 841576 843057 . - 0 ID=Thaps8537;Parent=Thaps8537;rank=1 chr10 . exon 841576 843057 . - . ID=Thaps8537.1;Parent=Thaps8537;constitutive=1;rank=1 chr10 . repeat_region 847259 847298 . ? . description=dust chr10 . repeat_region 851672 851717 . ? . description=dust chr10 . repeat_region 854631 854678 . ? . description=dust chr10 ensembl protein_coding_gene 847011 851194 . - . ID=Thaps24230;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9S9];external_name=Thaps24230;logic_name=jgi_thaps3 chr10 ensembl transcript 847011 851194 . - . ID=Thaps24230;Parent=Thaps24230;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 847011 847241 . - 0 ID=Thaps24230;Parent=Thaps24230;rank=6 chr10 . exon 847011 847241 . - . ID=Thaps24230.6;Parent=Thaps24230;constitutive=1;rank=6 chr10 . CDS 847338 849724 . - 0 ID=Thaps24230;Parent=Thaps24230;rank=5 chr10 . exon 847338 849724 . - . ID=Thaps24230.5;Parent=Thaps24230;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . CDS 849836 849947 . - 0 ID=Thaps24230;Parent=Thaps24230;rank=4 chr10 . exon 849836 849947 . - . ID=Thaps24230.4;Parent=Thaps24230;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 850144 850475 . - 0 ID=Thaps24230;Parent=Thaps24230;rank=3 chr10 . exon 850144 850475 . - . ID=Thaps24230.3;Parent=Thaps24230;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 850579 850838 . - 0 ID=Thaps24230;Parent=Thaps24230;rank=2 chr10 . exon 850579 850838 . - . ID=Thaps24230.2;Parent=Thaps24230;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 850935 851194 . - 0 ID=Thaps24230;Parent=Thaps24230;rank=1 chr10 . exon 850935 851194 . - . ID=Thaps24230.1;Parent=Thaps24230;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 851417 853530 . + . ID=Thaps8541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9T0];external_name=Thaps8541;logic_name=jgi_thaps3 chr10 ensembl transcript 851417 853530 . + . ID=Thaps8541;Parent=Thaps8541;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 851417 852525 . + 0 ID=Thaps8541;Parent=Thaps8541;rank=1 chr10 . exon 851417 852525 . + . ID=Thaps8541.1;Parent=Thaps8541;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 852603 853530 . + 0 ID=Thaps8541;Parent=Thaps8541;rank=2 chr10 . exon 852603 853530 . + . ID=Thaps8541.2;Parent=Thaps8541;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 854263 858068 . + . ID=Thaps8542;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9T1];external_name=Thaps8542;logic_name=jgi_thaps3 chr10 ensembl transcript 854263 858068 . + . ID=Thaps8542;Parent=Thaps8542;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 854263 857280 . + 0 ID=Thaps8542;Parent=Thaps8542;rank=1 chr10 . exon 854263 857280 . + . ID=Thaps8542.1;Parent=Thaps8542;constitutive=1;rank=1 chr10 . CDS 857385 858068 . + 0 ID=Thaps8542;Parent=Thaps8542;rank=2 chr10 ensembl protein_coding_gene 864648 877732 . + . ID=Thaps24231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9T4];external_name=Thaps24231;logic_name=jgi_thaps3 chr10 ensembl transcript 864648 877732 . + . ID=Thaps24231;Parent=Thaps24231;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 864648 870311 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=1 chr10 . exon 864648 870311 . + . ID=Thaps24231.1;Parent=Thaps24231;constitutive=1;rank=1 chr10 . CDS 870717 871873 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=2 chr10 . CDS 871967 876090 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=3 chr10 . CDS 876177 877361 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=4 chr10 . CDS 877446 877732 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=5 chr10 ensembl protein_coding_gene 858639 859896 . + . ID=Thaps669;biotype=protein_coding;description=Ran small GTPase [Source:UniProtKB/TrEMBL%3BAcc:B8C9T2];external_name=Thaps669;logic_name=jgi_thaps3 chr10 ensembl transcript 858639 859896 . + . ID=Thaps669;Parent=Thaps669;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 858639 859253 . + 0 ID=Thaps669;Parent=Thaps669;rank=1 chr10 . exon 858639 859253 . + . ID=Thaps669.1;Parent=Thaps669;constitutive=1;rank=1 chr10 . CDS 859864 859896 . + 0 ID=Thaps669;Parent=Thaps669;rank=2 chr10 . exon 859864 859896 . + . ID=Thaps669.2;Parent=Thaps669;constitutive=1;rank=2 chr10 . exon 857385 858068 . + . ID=Thaps8542.2;Parent=Thaps8542;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 861424 862864 . + . ID=Thaps8544;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9T3];external_name=Thaps8544;logic_name=jgi_thaps3 chr10 ensembl transcript 861424 862864 . + . ID=Thaps8544;Parent=Thaps8544;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 861424 862176 . + 0 ID=Thaps8544;Parent=Thaps8544;rank=1 chr10 . exon 861424 862176 . + . ID=Thaps8544.1;Parent=Thaps8544;constitutive=1;rank=1 chr10 . CDS 862223 862864 . + 0 ID=Thaps8544;Parent=Thaps8544;rank=2 chr10 . exon 862223 862864 . + . ID=Thaps8544.2;Parent=Thaps8544;constitutive=1;rank=2 chr10 . exon 870717 871873 . + . ID=Thaps24231.2;Parent=Thaps24231;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . exon 871967 876090 . + . ID=Thaps24231.3;Parent=Thaps24231;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . exon 876177 877361 . + . ID=Thaps24231.4;Parent=Thaps24231;constitutive=1;rank=4 chr10 . repeat_region 879290 879310 . ? . description=dust chr10 . biological_region 880007 880008 0.999 - . logic_name=eponine chr10 ensembl protein_coding_gene 864648 877732 . + . ID=Thaps24231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9T4];external_name=Thaps24231;logic_name=jgi_thaps3 chr10 ensembl transcript 864648 877732 . + . ID=Thaps24231;Parent=Thaps24231;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 864648 870311 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=1 chr10 . CDS 870717 871873 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=2 chr10 . CDS 871967 876090 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=3 chr10 . CDS 876177 877361 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=4 chr10 . CDS 877446 877732 . + 0 ID=Thaps24231;Parent=Thaps24231;rank=5 chr10 . exon 877446 877732 . + . ID=Thaps24231.5;Parent=Thaps24231;constitutive=1;ensembl_end_phase=2;rank=5 chr10 ensembl protein_coding_gene 886440 890188 . - . ID=Thaps24233;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9T9];external_name=Thaps24233;logic_name=jgi_thaps3 chr10 ensembl transcript 886440 890188 . - . ID=Thaps24233;Parent=Thaps24233;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 886440 890003 . - 0 ID=Thaps24233;Parent=Thaps24233;rank=2 chr10 . exon 886440 890003 . - . ID=Thaps24233.2;Parent=Thaps24233;constitutive=1;rank=2 chr10 . CDS 890072 890188 . - 0 ID=Thaps24233;Parent=Thaps24233;rank=1 chr10 ensembl protein_coding_gene 883017 883277 . - . ID=Thaps263713;biotype=protein_coding;description=Proteasome subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C9T7];external_name=Thaps263713;logic_name=jgi_thaps3 chr10 ensembl transcript 883017 883277 . - . ID=Thaps263713;Parent=Thaps263713;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 883017 883184 . - 0 ID=Thaps263713;Parent=Thaps263713;rank=2 chr10 . exon 883017 883184 . - . ID=Thaps263713.2;Parent=Thaps263713;constitutive=1;rank=2 chr10 . CDS 883227 883277 . - 0 ID=Thaps263713;Parent=Thaps263713;rank=1 chr10 . exon 883227 883277 . - . ID=Thaps263713.1;Parent=Thaps263713;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 883945 884603 . - . ID=Thaps263714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9T8];external_name=Thaps263714;logic_name=jgi_thaps3 chr10 ensembl transcript 883945 884603 . - . ID=Thaps263714;Parent=Thaps263714;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 883945 884603 . - 0 ID=Thaps263714;Parent=Thaps263714;rank=1 chr10 . exon 883945 884603 . - . ID=Thaps263714.1;Parent=Thaps263714;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 880034 882190 . + . ID=Thaps41892;biotype=protein_coding;description=Oligopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8C9T6];external_name=Thaps41892;logic_name=jgi_thaps3 chr10 ensembl transcript 880034 882190 . + . ID=Thaps41892;Parent=Thaps41892;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 880034 880574 . + 0 ID=Thaps41892;Parent=Thaps41892;rank=1 chr10 . exon 880034 880574 . + . ID=Thaps41892.1;Parent=Thaps41892;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 880614 882190 . + 0 ID=Thaps41892;Parent=Thaps41892;rank=2 chr10 . exon 880614 882190 . + . ID=Thaps41892.2;Parent=Thaps41892;constitutive=1;ensembl_end_phase=2;rank=2 chr10 ensembl protein_coding_gene 877799 879176 . - . ID=Thaps8546;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9T5];external_name=Thaps8546;logic_name=jgi_thaps3 chr10 ensembl transcript 877799 879176 . - . ID=Thaps8546;Parent=Thaps8546;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 877799 878782 . - 0 ID=Thaps8546;Parent=Thaps8546;rank=2 chr10 . exon 877799 878782 . - . ID=Thaps8546.2;Parent=Thaps8546;constitutive=1;rank=2 chr10 . CDS 878880 879176 . - 0 ID=Thaps8546;Parent=Thaps8546;rank=1 chr10 . exon 878880 879176 . - . ID=Thaps8546.1;Parent=Thaps8546;constitutive=1;rank=1 chr10 . exon 890072 890188 . - . ID=Thaps24233.1;Parent=Thaps24233;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 890867 891127 . + . ID=Thaps263715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9U0];external_name=Thaps263715;logic_name=jgi_thaps3 chr10 ensembl transcript 890867 891127 . + . ID=Thaps263715;Parent=Thaps263715;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 890867 890917 . + 0 ID=Thaps263715;Parent=Thaps263715;rank=1 chr10 . exon 890867 890917 . + . ID=Thaps263715.1;Parent=Thaps263715;constitutive=1;rank=1 chr10 . CDS 890960 891127 . + 0 ID=Thaps263715;Parent=Thaps263715;rank=2 chr10 . exon 890960 891127 . + . ID=Thaps263715.2;Parent=Thaps263715;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 892202 894544 . + . ID=Thaps8551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9U1];external_name=Thaps8551;logic_name=jgi_thaps3 chr10 ensembl transcript 892202 894544 . + . ID=Thaps8551;Parent=Thaps8551;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 892202 892274 . + 0 ID=Thaps8551;Parent=Thaps8551;rank=1 chr10 . exon 892202 892274 . + . ID=Thaps8551.1;Parent=Thaps8551;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 892373 893111 . + 0 ID=Thaps8551;Parent=Thaps8551;rank=2 chr10 . exon 892373 893111 . + . ID=Thaps8551.2;Parent=Thaps8551;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 893183 893999 . + 0 ID=Thaps8551;Parent=Thaps8551;rank=3 chr10 . exon 893183 893999 . + . ID=Thaps8551.3;Parent=Thaps8551;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 894089 894544 . + 0 ID=Thaps8551;Parent=Thaps8551;rank=4 chr10 . exon 894089 894544 . + . ID=Thaps8551.4;Parent=Thaps8551;constitutive=1;rank=4 chr10 ensembl protein_coding_gene 894602 902863 . - . ID=Thaps8552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9U2];external_name=Thaps8552;logic_name=jgi_thaps3 chr10 ensembl transcript 894602 902863 . - . ID=Thaps8552;Parent=Thaps8552;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 894602 895066 . - 0 ID=Thaps8552;Parent=Thaps8552;rank=4 chr10 . exon 894602 895066 . - . ID=Thaps8552.4;Parent=Thaps8552;constitutive=1;rank=4 chr10 . CDS 895121 896554 . - 0 ID=Thaps8552;Parent=Thaps8552;rank=3 chr10 . exon 895121 896554 . - . ID=Thaps8552.3;Parent=Thaps8552;constitutive=1;rank=3 chr10 . CDS 896639 898006 . - 0 ID=Thaps8552;Parent=Thaps8552;rank=2 chr10 . CDS 898091 902863 . - 0 ID=Thaps8552;Parent=Thaps8552;rank=1 chr10 . repeat_region 901527 901551 . ? . description=trf chr10 . repeat_region 901527 901577 . ? . description=dust chr10 . repeat_region 902476 902557 . ? . description=dust chr10 . repeat_region 902492 902531 . ? . description=trf chr10 . repeat_region 902496 902560 . ? . description=trf chr10 . repeat_region 903610 903634 . ? . description=trf chr10 . repeat_region 903892 903924 . ? . description=dust chr10 . repeat_region 903894 903924 . ? . description=trf chr10 . repeat_region 904303 904347 . ? . description=dust chr10 ensembl protein_coding_gene 903273 909998 . + . ID=Thaps24235;biotype=protein_coding;description=Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8C9U3];external_name=Thaps24235;logic_name=jgi_thaps3 chr10 ensembl transcript 903273 909998 . + . ID=Thaps24235;Parent=Thaps24235;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 903273 906641 . + 0 ID=Thaps24235;Parent=Thaps24235;rank=1 chr10 . exon 903273 906641 . + . ID=Thaps24235.1;Parent=Thaps24235;constitutive=1;rank=1 chr10 . CDS 906736 907397 . + 0 ID=Thaps24235;Parent=Thaps24235;rank=2 chr10 . CDS 907483 908377 . + 0 ID=Thaps24235;Parent=Thaps24235;rank=3 chr10 . CDS 908453 909307 . + 0 ID=Thaps24235;Parent=Thaps24235;rank=4 chr10 . CDS 909390 909998 . + 0 ID=Thaps24235;Parent=Thaps24235;rank=5 chr10 . exon 896639 898006 . - . ID=Thaps8552.2;Parent=Thaps8552;constitutive=1;rank=2 chr10 . exon 898091 902863 . - . ID=Thaps8552.1;Parent=Thaps8552;constitutive=1;rank=1 chr10 . exon 906736 907397 . + . ID=Thaps24235.2;Parent=Thaps24235;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . exon 907483 908377 . + . ID=Thaps24235.3;Parent=Thaps24235;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . exon 908453 909307 . + . ID=Thaps24235.4;Parent=Thaps24235;constitutive=1;rank=4 chr10 . exon 909390 909998 . + . ID=Thaps24235.5;Parent=Thaps24235;constitutive=1;rank=5 chr10 ensembl protein_coding_gene 910641 911257 . - . ID=Thaps263716;biotype=protein_coding;description=Protein with peroxisomal targeting peptide [Source:UniProtKB/TrEMBL%3BAcc:B8C9U4];external_name=Thaps263716;logic_name=jgi_thaps3 chr10 ensembl transcript 910641 911257 . - . ID=Thaps263716;Parent=Thaps263716;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 910641 910815 . - 0 ID=Thaps263716;Parent=Thaps263716;rank=4 chr10 . exon 910641 910815 . - . ID=Thaps263716.4;Parent=Thaps263716;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 910918 911021 . - 0 ID=Thaps263716;Parent=Thaps263716;rank=3 chr10 . exon 910918 911021 . - . ID=Thaps263716.3;Parent=Thaps263716;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 911059 911066 . - 0 ID=Thaps263716;Parent=Thaps263716;rank=2 chr10 . exon 911059 911066 . - . ID=Thaps263716.2;Parent=Thaps263716;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 911090 911257 . - 0 ID=Thaps263716;Parent=Thaps263716;rank=1 chr10 . exon 911090 911257 . - . ID=Thaps263716.1;Parent=Thaps263716;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 913259 915165 . - . ID=Thaps263717;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9U5];external_name=Thaps263717;logic_name=jgi_thaps3 chr10 ensembl transcript 913259 915165 . - . ID=Thaps263717;Parent=Thaps263717;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 913259 913506 . - 0 ID=Thaps263717;Parent=Thaps263717;rank=6 chr10 . exon 913259 913506 . - . ID=Thaps263717.6;Parent=Thaps263717;constitutive=1;ensembl_end_phase=2;rank=6 chr10 . CDS 913558 914142 . - 0 ID=Thaps263717;Parent=Thaps263717;rank=5 chr10 . exon 913558 914142 . - . ID=Thaps263717.5;Parent=Thaps263717;constitutive=1;rank=5 chr10 . CDS 914229 914385 . - 0 ID=Thaps263717;Parent=Thaps263717;rank=4 chr10 . exon 914229 914385 . - . ID=Thaps263717.4;Parent=Thaps263717;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 914500 914582 . - 0 ID=Thaps263717;Parent=Thaps263717;rank=3 chr10 . exon 914500 914582 . - . ID=Thaps263717.3;Parent=Thaps263717;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 914619 914709 . - 0 ID=Thaps263717;Parent=Thaps263717;rank=2 chr10 . exon 914619 914709 . - . ID=Thaps263717.2;Parent=Thaps263717;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 914818 915165 . - 0 ID=Thaps263717;Parent=Thaps263717;rank=1 chr10 . exon 914818 915165 . - . ID=Thaps263717.1;Parent=Thaps263717;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 915848 916597 . - . ID=Thaps36459;biotype=protein_coding;description=Methylthioadenosine/S-adenosyl homocysteine nucleosidase [Source:UniProtKB/TrEMBL%3BAcc:B8C9U6];external_name=Thaps36459;logic_name=jgi_thaps3 chr10 ensembl transcript 915848 916597 . - . ID=Thaps36459;Parent=Thaps36459;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 915848 916597 . - 0 ID=Thaps36459;Parent=Thaps36459;rank=1 chr10 . exon 915848 916597 . - . ID=Thaps36459.1;Parent=Thaps36459;constitutive=1;rank=1 chr10 . repeat_region 917655 917662 . ? . description=dust chr10 . repeat_region 918880 918902 . ? . description=trf chr10 . repeat_region 919316 919329 . ? . description=dust chr10 . repeat_region 920086 920093 . ? . description=dust chr10 . repeat_region 921368 921387 . ? . description=dust chr10 ensembl protein_coding_gene 920097 920371 . - . ID=Thaps263720;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9U8];external_name=Thaps263720;logic_name=jgi_thaps3 chr10 ensembl transcript 920097 920371 . - . ID=Thaps263720;Parent=Thaps263720;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 920097 920371 . - 0 ID=Thaps263720;Parent=Thaps263720;rank=1 chr10 . exon 920097 920371 . - . ID=Thaps263720.1;Parent=Thaps263720;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 921926 923977 . + . ID=Thaps263721;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9U9];external_name=Thaps263721;logic_name=jgi_thaps3 chr10 ensembl transcript 921926 923977 . + . ID=Thaps263721;Parent=Thaps263721;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 921926 922037 . + 0 ID=Thaps263721;Parent=Thaps263721;rank=1 chr10 . exon 921926 922037 . + . ID=Thaps263721.1;Parent=Thaps263721;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 922151 922227 . + 0 ID=Thaps263721;Parent=Thaps263721;rank=2 chr10 . exon 922151 922227 . + . ID=Thaps263721.2;Parent=Thaps263721;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 922360 922963 . + 0 ID=Thaps263721;Parent=Thaps263721;rank=3 chr10 . exon 922360 922963 . + . ID=Thaps263721.3;Parent=Thaps263721;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 923033 923072 . + 0 ID=Thaps263721;Parent=Thaps263721;rank=4 chr10 . exon 923033 923072 . + . ID=Thaps263721.4;Parent=Thaps263721;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 923163 923184 . + 0 ID=Thaps263721;Parent=Thaps263721;rank=5 chr10 . exon 923163 923184 . + . ID=Thaps263721.5;Parent=Thaps263721;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . CDS 923256 923977 . + 0 ID=Thaps263721;Parent=Thaps263721;rank=6 chr10 . exon 923256 923977 . + . ID=Thaps263721.6;Parent=Thaps263721;constitutive=1;ensembl_end_phase=2;rank=6 chr10 ensembl protein_coding_gene 916804 917121 . + . ID=Thaps29506;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9U7];external_name=Thaps29506;logic_name=jgi_thaps3 chr10 ensembl transcript 916804 917121 . + . ID=Thaps29506;Parent=Thaps29506;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 916804 917121 . + 0 ID=Thaps29506;Parent=Thaps29506;rank=1 chr10 . exon 916804 917121 . + . ID=Thaps29506.1;Parent=Thaps29506;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 924041 925741 . - . ID=Thaps8559;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9V0];external_name=Thaps8559;logic_name=jgi_thaps3 chr10 ensembl transcript 924041 925741 . - . ID=Thaps8559;Parent=Thaps8559;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 924041 925741 . - 0 ID=Thaps8559;Parent=Thaps8559;rank=1 chr10 . exon 924041 925741 . - . ID=Thaps8559.1;Parent=Thaps8559;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 926358 927999 . - . ID=Thaps8560;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9V1];external_name=Thaps8560;logic_name=jgi_thaps3 chr10 ensembl transcript 926358 927999 . - . ID=Thaps8560;Parent=Thaps8560;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 926358 926458 . - 0 ID=Thaps8560;Parent=Thaps8560;rank=2 chr10 . exon 926358 926458 . - . ID=Thaps8560.2;Parent=Thaps8560;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 926766 927999 . - 0 ID=Thaps8560;Parent=Thaps8560;rank=1 chr10 ensembl protein_coding_gene 932678 933675 . - . ID=Thaps263722;biotype=protein_coding;description=Bisphosphate nucleotidase [Source:UniProtKB/TrEMBL%3BAcc:B8C9V4];external_name=Thaps263722;logic_name=jgi_thaps3 chr10 ensembl transcript 932678 933675 . - . ID=Thaps263722;Parent=Thaps263722;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 932678 933075 . - 0 ID=Thaps263722;Parent=Thaps263722;rank=3 chr10 . exon 932678 933075 . - . ID=Thaps263722.3;Parent=Thaps263722;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 933097 933144 . - 0 ID=Thaps263722;Parent=Thaps263722;rank=2 chr10 . exon 933097 933144 . - . ID=Thaps263722.2;Parent=Thaps263722;constitutive=1;rank=2 chr10 . CDS 933208 933675 . - 0 ID=Thaps263722;Parent=Thaps263722;rank=1 chr10 . exon 933208 933675 . - . ID=Thaps263722.1;Parent=Thaps263722;constitutive=1;rank=1 chr10 . exon 926766 927999 . - . ID=Thaps8560.1;Parent=Thaps8560;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 928569 928874 . + . ID=Thaps8561;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9V2];external_name=Thaps8561;logic_name=jgi_thaps3 chr10 ensembl transcript 928569 928874 . + . ID=Thaps8561;Parent=Thaps8561;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 928569 928874 . + 0 ID=Thaps8561;Parent=Thaps8561;rank=1 chr10 . exon 928569 928874 . + . ID=Thaps8561.1;Parent=Thaps8561;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 929766 932450 . + . ID=Thaps8562;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9V3];external_name=Thaps8562;logic_name=jgi_thaps3 chr10 ensembl transcript 929766 932450 . + . ID=Thaps8562;Parent=Thaps8562;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 929766 932450 . + 0 ID=Thaps8562;Parent=Thaps8562;rank=1 chr10 . exon 929766 932450 . + . ID=Thaps8562.1;Parent=Thaps8562;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 934672 936159 . + . ID=Thaps8564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9V5];external_name=Thaps8564;logic_name=jgi_thaps3 chr10 ensembl transcript 934672 936159 . + . ID=Thaps8564;Parent=Thaps8564;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 934672 936159 . + 0 ID=Thaps8564;Parent=Thaps8564;rank=1 chr10 . exon 934672 936159 . + . ID=Thaps8564.1;Parent=Thaps8564;constitutive=1;rank=1 chr10 . repeat_region 936775 936782 . ? . description=dust chr10 . repeat_region 938008 938074 . ? . description=dust chr10 . repeat_region 938055 938074 . ? . description=trf chr10 . repeat_region 940792 940834 . ? . description=dust chr10 . repeat_region 941371 941411 . ? . description=trf chr10 ensembl protein_coding_gene 941906 942532 . - . ID=Thaps263724;biotype=protein_coding;description=Probable signal peptidase [Source:UniProtKB/TrEMBL%3BAcc:B8C9V7];external_name=Thaps263724;logic_name=jgi_thaps3 chr10 ensembl transcript 941906 942532 . - . ID=Thaps263724;Parent=Thaps263724;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 941906 942532 . - 0 ID=Thaps263724;Parent=Thaps263724;rank=1 chr10 . exon 941906 942532 . - . ID=Thaps263724.1;Parent=Thaps263724;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 945371 946945 . - . ID=Thaps36310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S3];external_name=Thaps36310;logic_name=jgi_thaps3 chr10 ensembl transcript 945371 946945 . - . ID=Thaps36310;Parent=Thaps36310;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 945371 945814 . - 0 ID=Thaps36310;Parent=Thaps36310;rank=4 chr10 . exon 945371 945814 . - . ID=Thaps36310.4;Parent=Thaps36310;constitutive=1;rank=4 chr10 . CDS 945891 945951 . - 0 ID=Thaps36310;Parent=Thaps36310;rank=3 chr10 . exon 945891 945951 . - . ID=Thaps36310.3;Parent=Thaps36310;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 946065 946741 . - 0 ID=Thaps36310;Parent=Thaps36310;rank=2 chr10 . exon 946065 946741 . - . ID=Thaps36310.2;Parent=Thaps36310;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 946850 946945 . - 0 ID=Thaps36310;Parent=Thaps36310;rank=1 chr10 ensembl protein_coding_gene 944196 945143 . + . ID=Thaps36481;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9V8];external_name=Thaps36481;logic_name=jgi_thaps3 chr10 ensembl transcript 944196 945143 . + . ID=Thaps36481;Parent=Thaps36481;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 944196 945143 . + 0 ID=Thaps36481;Parent=Thaps36481;rank=1 chr10 . exon 944196 945143 . + . ID=Thaps36481.1;Parent=Thaps36481;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 938872 941699 . + . ID=Thaps41898;biotype=protein_coding;description=Heat shock protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9V6];external_name=HSP70_2;logic_name=jgi_thaps3 chr10 ensembl transcript 938872 941699 . + . ID=Thaps41898;Parent=Thaps41898;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 938872 940231 . + 0 ID=Thaps41898;Parent=Thaps41898;rank=1 chr10 . exon 938872 940231 . + . ID=Thaps41898.1;Parent=Thaps41898;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 940283 940767 . + 0 ID=Thaps41898;Parent=Thaps41898;rank=2 chr10 . exon 940283 940767 . + . ID=Thaps41898.2;Parent=Thaps41898;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 940941 941699 . + 0 ID=Thaps41898;Parent=Thaps41898;rank=3 chr10 . exon 940941 941699 . + . ID=Thaps41898.3;Parent=Thaps41898;constitutive=1;rank=3 chr10 ensembl protein_coding_gene 947527 949061 . + . ID=Thaps24241;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S4];external_name=Thaps24241;logic_name=jgi_thaps3 chr10 ensembl transcript 947527 949061 . + . ID=Thaps24241;Parent=Thaps24241;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 947527 948323 . + 0 ID=Thaps24241;Parent=Thaps24241;rank=1 chr10 . exon 947527 948323 . + . ID=Thaps24241.1;Parent=Thaps24241;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 948431 949061 . + 0 ID=Thaps24241;Parent=Thaps24241;rank=2 chr10 . exon 948431 949061 . + . ID=Thaps24241.2;Parent=Thaps24241;constitutive=1;ensembl_end_phase=1;rank=2 chr10 ensembl protein_coding_gene 949227 953360 . - . ID=Thaps269532;biotype=protein_coding;description=Meiotic check point regulator-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S5];external_name=Thaps269532;logic_name=jgi_thaps3 chr10 ensembl transcript 949227 953360 . - . ID=Thaps269532;Parent=Thaps269532;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 949227 950183 . - 0 ID=Thaps269532;Parent=Thaps269532;rank=7 chr10 . exon 949227 950183 . - . ID=Thaps269532.7;Parent=Thaps269532;constitutive=1;rank=7 chr10 . CDS 950304 950456 . - 0 ID=Thaps269532;Parent=Thaps269532;rank=6 chr10 . exon 950304 950456 . - . ID=Thaps269532.6;Parent=Thaps269532;constitutive=1;rank=6 chr10 . CDS 950551 950694 . - 0 ID=Thaps269532;Parent=Thaps269532;rank=5 chr10 . exon 950551 950694 . - . ID=Thaps269532.5;Parent=Thaps269532;constitutive=1;rank=5 chr10 . CDS 950743 950977 . - 0 ID=Thaps269532;Parent=Thaps269532;rank=4 chr10 . exon 950743 950977 . - . ID=Thaps269532.4;Parent=Thaps269532;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 951059 951688 . - 0 ID=Thaps269532;Parent=Thaps269532;rank=3 chr10 . exon 951059 951688 . - . ID=Thaps269532.3;Parent=Thaps269532;constitutive=1;rank=3 chr10 . CDS 951773 952004 . - 0 ID=Thaps269532;Parent=Thaps269532;rank=2 chr10 . exon 951773 952004 . - . ID=Thaps269532.2;Parent=Thaps269532;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 952085 953360 . - 0 ID=Thaps269532;Parent=Thaps269532;rank=1 chr10 . exon 952085 953360 . - . ID=Thaps269532.1;Parent=Thaps269532;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . exon 946850 946945 . - . ID=Thaps36310.1;Parent=Thaps36310;constitutive=1;rank=1 chr10 . repeat_region 961324 961333 . ? . description=dust chr10 ensembl protein_coding_gene 958738 961155 . + . ID=Thaps24243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S7];external_name=Thaps24243;logic_name=jgi_thaps3 chr10 ensembl transcript 958738 961155 . + . ID=Thaps24243;Parent=Thaps24243;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 958738 961155 . + 0 ID=Thaps24243;Parent=Thaps24243;rank=1 chr10 . exon 958738 961155 . + . ID=Thaps24243.1;Parent=Thaps24243;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 963824 965190 . + . ID=Thaps263726;biotype=protein_coding;description=Ftsh-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S9];external_name=Thaps263726;logic_name=jgi_thaps3 chr10 ensembl transcript 963824 965190 . + . ID=Thaps263726;Parent=Thaps263726;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 963824 964204 . + 0 ID=Thaps263726;Parent=Thaps263726;rank=1 chr10 . exon 963824 964204 . + . ID=Thaps263726.1;Parent=Thaps263726;constitutive=1;rank=1 chr10 . CDS 964291 964402 . + 0 ID=Thaps263726;Parent=Thaps263726;rank=2 chr10 . exon 964291 964402 . + . ID=Thaps263726.2;Parent=Thaps263726;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 964487 964808 . + 0 ID=Thaps263726;Parent=Thaps263726;rank=3 chr10 . exon 964487 964808 . + . ID=Thaps263726.3;Parent=Thaps263726;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 964931 965190 . + 0 ID=Thaps263726;Parent=Thaps263726;rank=4 chr10 . exon 964931 965190 . + . ID=Thaps263726.4;Parent=Thaps263726;constitutive=1;ensembl_end_phase=2;rank=4 chr10 ensembl protein_coding_gene 957116 958105 . - . ID=Thaps8571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S6];external_name=Thaps8571;logic_name=jgi_thaps3 chr10 ensembl transcript 957116 958105 . - . ID=Thaps8571;Parent=Thaps8571;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 957116 957259 . - 0 ID=Thaps8571;Parent=Thaps8571;rank=4 chr10 . exon 957116 957259 . - . ID=Thaps8571.4;Parent=Thaps8571;constitutive=1;rank=4 chr10 . CDS 957285 957410 . - 0 ID=Thaps8571;Parent=Thaps8571;rank=3 chr10 . exon 957285 957410 . - . ID=Thaps8571.3;Parent=Thaps8571;constitutive=1;rank=3 chr10 . CDS 957500 957748 . - 0 ID=Thaps8571;Parent=Thaps8571;rank=2 chr10 . exon 957500 957748 . - . ID=Thaps8571.2;Parent=Thaps8571;constitutive=1;rank=2 chr10 . CDS 958103 958105 . - 0 ID=Thaps8571;Parent=Thaps8571;rank=1 chr10 . exon 958103 958105 . - . ID=Thaps8571.1;Parent=Thaps8571;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 961731 962774 . - . ID=Thaps8573;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S8];external_name=Thaps8573;logic_name=jgi_thaps3 chr10 ensembl transcript 961731 962774 . - . ID=Thaps8573;Parent=Thaps8573;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 961731 962774 . - 0 ID=Thaps8573;Parent=Thaps8573;rank=1 chr10 . exon 961731 962774 . - . ID=Thaps8573.1;Parent=Thaps8573;constitutive=1;rank=1 chr10 . repeat_region 967792 967838 . ? . description=trf chr10 . repeat_region 968892 968942 . ? . description=trf chr10 . repeat_region 975998 976024 . ? . description=trf chr10 ensembl protein_coding_gene 969664 972312 . - . ID=Thaps24245;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8T0];external_name=Thaps24245;logic_name=jgi_thaps3 chr10 ensembl transcript 969664 972312 . - . ID=Thaps24245;Parent=Thaps24245;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 969664 971586 . - 0 ID=Thaps24245;Parent=Thaps24245;rank=2 chr10 . exon 969664 971586 . - . ID=Thaps24245.2;Parent=Thaps24245;constitutive=1;rank=2 chr10 . CDS 971869 972312 . - 0 ID=Thaps24245;Parent=Thaps24245;rank=1 chr10 . exon 971869 972312 . - . ID=Thaps24245.1;Parent=Thaps24245;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 972580 976591 . - . ID=Thaps8576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8T1];external_name=Thaps8576;logic_name=jgi_thaps3 chr10 ensembl transcript 972580 976591 . - . ID=Thaps8576;Parent=Thaps8576;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 972580 973079 . - 0 ID=Thaps8576;Parent=Thaps8576;rank=5 chr10 . exon 972580 973079 . - . ID=Thaps8576.5;Parent=Thaps8576;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . CDS 973109 973292 . - 0 ID=Thaps8576;Parent=Thaps8576;rank=4 chr10 . exon 973109 973292 . - . ID=Thaps8576.4;Parent=Thaps8576;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 973366 973465 . - 0 ID=Thaps8576;Parent=Thaps8576;rank=3 chr10 . exon 973366 973465 . - . ID=Thaps8576.3;Parent=Thaps8576;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 973558 974546 . - 0 ID=Thaps8576;Parent=Thaps8576;rank=2 chr10 . exon 973558 974546 . - . ID=Thaps8576.2;Parent=Thaps8576;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 974630 976591 . - 0 ID=Thaps8576;Parent=Thaps8576;rank=1 chr10 . exon 974630 976591 . - . ID=Thaps8576.1;Parent=Thaps8576;constitutive=1;rank=1 chr10 . repeat_region 978934 978961 . ? . description=dust chr10 . repeat_region 979532 979592 . ? . description=dust chr10 . biological_region 979640 979643 0.999 - . logic_name=eponine chr10 . biological_region 979647 979649 0.999 + . logic_name=eponine chr10 . repeat_region 980360 980367 . ? . description=dust chr10 ensembl protein_coding_gene 985746 987467 . + . ID=Thaps24247;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8T4];external_name=Thaps24247;logic_name=jgi_thaps3 chr10 ensembl transcript 985746 987467 . + . ID=Thaps24247;Parent=Thaps24247;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 985746 987467 . + 0 ID=Thaps24247;Parent=Thaps24247;rank=1 chr10 . exon 985746 987467 . + . ID=Thaps24247.1;Parent=Thaps24247;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 980095 985405 . + . ID=Thaps269534;biotype=protein_coding;description=SUPT6H%2C-like protein to suppressor of ty 6 [Source:UniProtKB/TrEMBL%3BAcc:B8C8T3];external_name=SUPT6H;logic_name=jgi_thaps3 chr10 ensembl transcript 980095 985405 . + . ID=Thaps269534;Parent=Thaps269534;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 980095 980208 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=1 chr10 . exon 980095 980208 . + . ID=Thaps269534.1;Parent=Thaps269534;constitutive=1;rank=1 chr10 . CDS 980434 980534 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=2 chr10 . exon 980434 980534 . + . ID=Thaps269534.2;Parent=Thaps269534;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 980562 981163 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=3 chr10 . exon 980562 981163 . + . ID=Thaps269534.3;Parent=Thaps269534;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 981634 981800 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=4 chr10 . exon 981634 981800 . + . ID=Thaps269534.4;Parent=Thaps269534;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 981924 982192 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=5 chr10 . exon 981924 982192 . + . ID=Thaps269534.5;Parent=Thaps269534;constitutive=1;ensembl_end_phase=2;rank=5 chr10 . CDS 982283 982387 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=6 chr10 . exon 982283 982387 . + . ID=Thaps269534.6;Parent=Thaps269534;constitutive=1;rank=6 chr10 . CDS 982439 982893 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=7 chr10 . exon 982439 982893 . + . ID=Thaps269534.7;Parent=Thaps269534;constitutive=1;ensembl_end_phase=2;rank=7 chr10 . CDS 983002 983777 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=8 chr10 . exon 983002 983777 . + . ID=Thaps269534.8;Parent=Thaps269534;constitutive=1;ensembl_end_phase=2;rank=8 chr10 . CDS 983895 984200 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=9 chr10 . exon 983895 984200 . + . ID=Thaps269534.9;Parent=Thaps269534;constitutive=1;rank=9 chr10 . CDS 984228 984426 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=10 chr10 . exon 984228 984426 . + . ID=Thaps269534.10;Parent=Thaps269534;constitutive=1;ensembl_end_phase=1;rank=10 chr10 . CDS 984496 984752 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=11 chr10 . exon 984496 984752 . + . ID=Thaps269534.11;Parent=Thaps269534;constitutive=1;ensembl_end_phase=2;rank=11 chr10 . CDS 984842 985405 . + 0 ID=Thaps269534;Parent=Thaps269534;rank=12 chr10 . exon 984842 985405 . + . ID=Thaps269534.12;Parent=Thaps269534;constitutive=1;rank=12 chr10 ensembl protein_coding_gene 977663 978733 . - . ID=Thaps36321;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8T2];external_name=Thaps36321;logic_name=jgi_thaps3 chr10 ensembl transcript 977663 978733 . - . ID=Thaps36321;Parent=Thaps36321;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 977663 978432 . - 0 ID=Thaps36321;Parent=Thaps36321;rank=2 chr10 . exon 977663 978432 . - . ID=Thaps36321.2;Parent=Thaps36321;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 978550 978733 . - 0 ID=Thaps36321;Parent=Thaps36321;rank=1 chr10 . exon 978550 978733 . - . ID=Thaps36321.1;Parent=Thaps36321;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 994316 995171 . + . ID=Thaps18220;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8T6];external_name=Thaps18220;logic_name=jgi_thaps3 chr10 ensembl transcript 994316 995171 . + . ID=Thaps18220;Parent=Thaps18220;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 994316 994361 . + 0 ID=Thaps18220;Parent=Thaps18220;rank=1 chr10 . exon 994316 994361 . + . ID=Thaps18220.1;Parent=Thaps18220;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 994633 995171 . + 0 ID=Thaps18220;Parent=Thaps18220;rank=2 chr10 . exon 994633 995171 . + . ID=Thaps18220.2;Parent=Thaps18220;constitutive=1;ensembl_end_phase=2;rank=2 chr10 ensembl protein_coding_gene 987995 993200 . + . ID=Thaps24248;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8T5];external_name=Thaps24248;logic_name=jgi_thaps3 chr10 ensembl transcript 987995 993200 . + . ID=Thaps24248;Parent=Thaps24248;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 987995 988042 . + 0 ID=Thaps24248;Parent=Thaps24248;rank=1 chr10 . exon 987995 988042 . + . ID=Thaps24248.1;Parent=Thaps24248;constitutive=1;rank=1 chr10 . CDS 988207 988638 . + 0 ID=Thaps24248;Parent=Thaps24248;rank=2 chr10 . exon 988207 988638 . + . ID=Thaps24248.2;Parent=Thaps24248;constitutive=1;rank=2 chr10 . CDS 988826 990238 . + 0 ID=Thaps24248;Parent=Thaps24248;rank=3 chr10 . exon 988826 990238 . + . ID=Thaps24248.3;Parent=Thaps24248;constitutive=1;rank=3 chr10 . CDS 990317 991126 . + 0 ID=Thaps24248;Parent=Thaps24248;rank=4 chr10 . exon 990317 991126 . + . ID=Thaps24248.4;Parent=Thaps24248;constitutive=1;rank=4 chr10 . CDS 991210 992514 . + 0 ID=Thaps24248;Parent=Thaps24248;rank=5 chr10 . exon 991210 992514 . + . ID=Thaps24248.5;Parent=Thaps24248;constitutive=1;rank=5 chr10 . CDS 992601 993200 . + 0 ID=Thaps24248;Parent=Thaps24248;rank=6 chr10 . exon 992601 993200 . + . ID=Thaps24248.6;Parent=Thaps24248;constitutive=1;rank=6 chr10 ensembl protein_coding_gene 995838 998567 . + . ID=Thaps8582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8T7];external_name=Thaps8582;logic_name=jgi_thaps3 chr10 ensembl transcript 995838 998567 . + . ID=Thaps8582;Parent=Thaps8582;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 995838 998567 . + 0 ID=Thaps8582;Parent=Thaps8582;rank=1 chr10 . exon 995838 998567 . + . ID=Thaps8582.1;Parent=Thaps8582;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 998800 999378 . - . ID=Thaps19351;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8T8];external_name=Thaps19351;logic_name=jgi_thaps3 chr10 ensembl transcript 998800 999378 . - . ID=Thaps19351;Parent=Thaps19351;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 998800 999210 . - 0 ID=Thaps19351;Parent=Thaps19351;rank=2 chr10 . exon 998800 999210 . - . ID=Thaps19351.2;Parent=Thaps19351;constitutive=1;rank=2 chr10 . CDS 999319 999378 . - 0 ID=Thaps19351;Parent=Thaps19351;rank=1 chr10 . exon 999319 999378 . - . ID=Thaps19351.1;Parent=Thaps19351;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1000728 1008238 . + . ID=Thaps8584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8T9];external_name=Thaps8584;logic_name=jgi_thaps3 chr10 ensembl transcript 1000728 1008238 . + . ID=Thaps8584;Parent=Thaps8584;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1000728 1004435 . + 0 ID=Thaps8584;Parent=Thaps8584;rank=1 chr10 . exon 1000728 1004435 . + . ID=Thaps8584.1;Parent=Thaps8584;constitutive=1;rank=1 chr10 . CDS 1004526 1004635 . + 0 ID=Thaps8584;Parent=Thaps8584;rank=2 chr10 . exon 1004526 1004635 . + . ID=Thaps8584.2;Parent=Thaps8584;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 1004727 1006936 . + 0 ID=Thaps8584;Parent=Thaps8584;rank=3 chr10 . exon 1004727 1006936 . + . ID=Thaps8584.3;Parent=Thaps8584;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 1007124 1008238 . + 0 ID=Thaps8584;Parent=Thaps8584;rank=4 chr10 . repeat_region 1006994 1007054 . - . description=Copia9LTR_TP chr10 . repeat_region 1013331 1013351 . ? . description=trf chr10 . repeat_region 1013331 1013351 . ? . description=dust chr10 ensembl protein_coding_gene 1008673 1012182 . - . ID=Thaps36339;biotype=protein_coding;description=Isoleucine-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C8U0];external_name=ITS1;logic_name=jgi_thaps3 chr10 ensembl transcript 1008673 1012182 . - . ID=Thaps36339;Parent=Thaps36339;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1008673 1008969 . - 0 ID=Thaps36339;Parent=Thaps36339;rank=3 chr10 . exon 1008673 1008969 . - . ID=Thaps36339.3;Parent=Thaps36339;constitutive=1;rank=3 chr10 . CDS 1009064 1011814 . - 0 ID=Thaps36339;Parent=Thaps36339;rank=2 chr10 . exon 1009064 1011814 . - . ID=Thaps36339.2;Parent=Thaps36339;constitutive=1;rank=2 chr10 . CDS 1012063 1012182 . - 0 ID=Thaps36339;Parent=Thaps36339;rank=1 chr10 . exon 1012063 1012182 . - . ID=Thaps36339.1;Parent=Thaps36339;constitutive=1;rank=1 chr10 . exon 1007124 1008238 . + . ID=Thaps8584.4;Parent=Thaps8584;constitutive=1;ensembl_end_phase=2;rank=4 chr10 ensembl protein_coding_gene 1013306 1015061 . + . ID=Thaps8586;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8U1];external_name=Thaps8586;logic_name=jgi_thaps3 chr10 ensembl transcript 1013306 1015061 . + . ID=Thaps8586;Parent=Thaps8586;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1013306 1013652 . + 0 ID=Thaps8586;Parent=Thaps8586;rank=1 chr10 . exon 1013306 1013652 . + . ID=Thaps8586.1;Parent=Thaps8586;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . CDS 1013747 1013927 . + 0 ID=Thaps8586;Parent=Thaps8586;rank=2 chr10 . exon 1013747 1013927 . + . ID=Thaps8586.2;Parent=Thaps8586;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 1013982 1014250 . + 0 ID=Thaps8586;Parent=Thaps8586;rank=3 chr10 . exon 1013982 1014250 . + . ID=Thaps8586.3;Parent=Thaps8586;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 1014332 1015061 . + 0 ID=Thaps8586;Parent=Thaps8586;rank=4 chr10 . exon 1014332 1015061 . + . ID=Thaps8586.4;Parent=Thaps8586;constitutive=1;ensembl_end_phase=1;rank=4 chr10 ensembl protein_coding_gene 1015222 1016374 . - . ID=Thaps8587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8U2];external_name=Thaps8587;logic_name=jgi_thaps3 chr10 ensembl transcript 1015222 1016374 . - . ID=Thaps8587;Parent=Thaps8587;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1015222 1015913 . - 0 ID=Thaps8587;Parent=Thaps8587;rank=2 chr10 . exon 1015222 1015913 . - . ID=Thaps8587.2;Parent=Thaps8587;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 1015990 1016374 . - 0 ID=Thaps8587;Parent=Thaps8587;rank=1 chr10 . exon 1015990 1016374 . - . ID=Thaps8587.1;Parent=Thaps8587;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 1017027 1019846 . - . ID=Thaps24250;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8U3];external_name=Thaps24250;logic_name=jgi_thaps3 chr10 ensembl transcript 1017027 1019846 . - . ID=Thaps24250;Parent=Thaps24250;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1017027 1017794 . - 0 ID=Thaps24250;Parent=Thaps24250;rank=4 chr10 . exon 1017027 1017794 . - . ID=Thaps24250.4;Parent=Thaps24250;constitutive=1;rank=4 chr10 . CDS 1017878 1018910 . - 0 ID=Thaps24250;Parent=Thaps24250;rank=3 chr10 . exon 1017878 1018910 . - . ID=Thaps24250.3;Parent=Thaps24250;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 1019081 1019206 . - 0 ID=Thaps24250;Parent=Thaps24250;rank=2 chr10 . exon 1019081 1019206 . - . ID=Thaps24250.2;Parent=Thaps24250;constitutive=1;rank=2 chr10 . CDS 1019623 1019846 . - 0 ID=Thaps24250;Parent=Thaps24250;rank=1 chr10 . exon 1019623 1019846 . - . ID=Thaps24250.1;Parent=Thaps24250;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 1022877 1023637 . + . ID=Thaps263734;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8U4];external_name=Thaps263734;logic_name=jgi_thaps3 chr10 ensembl transcript 1022877 1023637 . + . ID=Thaps263734;Parent=Thaps263734;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1022877 1023637 . + 0 ID=Thaps263734;Parent=Thaps263734;rank=1 chr10 . exon 1022877 1023637 . + . ID=Thaps263734.1;Parent=Thaps263734;constitutive=1;ensembl_end_phase=2;rank=1 chr10 . repeat_region 1030518 1030529 . ? . description=dust chr10 . repeat_region 1033702 1033709 . ? . description=dust chr10 . repeat_region 1033857 1033927 . ? . description=trf chr10 ensembl protein_coding_gene 1032369 1033412 . - . ID=Thaps24255;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8U8];external_name=Thaps24255;logic_name=jgi_thaps3 chr10 ensembl transcript 1032369 1033412 . - . ID=Thaps24255;Parent=Thaps24255;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1032369 1033412 . - 0 ID=Thaps24255;Parent=Thaps24255;rank=1 chr10 . exon 1032369 1033412 . - . ID=Thaps24255.1;Parent=Thaps24255;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1028648 1029395 . - . ID=Thaps26367;biotype=protein_coding;description=RS15A%2C ribosomal protein 15 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C8U6];external_name=RS15A;logic_name=jgi_thaps3 chr10 ensembl transcript 1028648 1029395 . - . ID=Thaps26367;Parent=Thaps26367;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1028648 1028907 . - 0 ID=Thaps26367;Parent=Thaps26367;rank=2 chr10 . exon 1028648 1028907 . - . ID=Thaps26367.2;Parent=Thaps26367;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 1029263 1029395 . - 0 ID=Thaps26367;Parent=Thaps26367;rank=1 chr10 . exon 1029263 1029395 . - . ID=Thaps26367.1;Parent=Thaps26367;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 1033844 1040100 . - . ID=Thaps269540;biotype=protein_coding;description=Clathrin heavy chain [Source:UniProtKB/TrEMBL%3BAcc:B8C8U9];external_name=CHC;logic_name=jgi_thaps3 chr10 ensembl transcript 1033844 1040100 . - . ID=Thaps269540;Parent=Thaps269540;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1033844 1034536 . - 0 ID=Thaps269540;Parent=Thaps269540;rank=4 chr10 . exon 1033844 1034536 . - . ID=Thaps269540.4;Parent=Thaps269540;constitutive=1;rank=4 chr10 . CDS 1034625 1036205 . - 0 ID=Thaps269540;Parent=Thaps269540;rank=3 chr10 . exon 1034625 1036205 . - . ID=Thaps269540.3;Parent=Thaps269540;constitutive=1;rank=3 chr10 . CDS 1036239 1039082 . - 0 ID=Thaps269540;Parent=Thaps269540;rank=2 chr10 . CDS 1040062 1040100 . - 0 ID=Thaps269540;Parent=Thaps269540;rank=1 chr10 ensembl protein_coding_gene 1030586 1030927 . + . ID=Thaps29531;biotype=protein_coding;description=RL35A%2C ribosomal protein 35A 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C8U7];external_name=RL35A;logic_name=jgi_thaps3 chr10 ensembl transcript 1030586 1030927 . + . ID=Thaps29531;Parent=Thaps29531;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1030586 1030927 . + 0 ID=Thaps29531;Parent=Thaps29531;rank=1 chr10 . exon 1030586 1030927 . + . ID=Thaps29531.1;Parent=Thaps29531;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1026683 1027532 . - . ID=Thaps36462;biotype=protein_coding;description=Triosephosphate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8C8U5];external_name=TPI3;logic_name=jgi_thaps3 chr10 ensembl transcript 1026683 1027532 . - . ID=Thaps36462;Parent=Thaps36462;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1026683 1026921 . - 0 ID=Thaps36462;Parent=Thaps36462;rank=3 chr10 . exon 1026683 1026921 . - . ID=Thaps36462.3;Parent=Thaps36462;constitutive=1;ensembl_end_phase=2;rank=3 chr10 . CDS 1027043 1027229 . - 0 ID=Thaps36462;Parent=Thaps36462;rank=2 chr10 . exon 1027043 1027229 . - . ID=Thaps36462.2;Parent=Thaps36462;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 1027371 1027532 . - 0 ID=Thaps36462;Parent=Thaps36462;rank=1 chr10 . exon 1027371 1027532 . - . ID=Thaps36462.1;Parent=Thaps36462;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1040635 1041951 . - . ID=Thaps24257;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8V0];external_name=Thaps24257;logic_name=jgi_thaps3 chr10 ensembl transcript 1040635 1041951 . - . ID=Thaps24257;Parent=Thaps24257;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1040635 1041951 . - 0 ID=Thaps24257;Parent=Thaps24257;rank=1 chr10 . exon 1040635 1041951 . - . ID=Thaps24257.1;Parent=Thaps24257;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1042952 1046418 . - . ID=Thaps24258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8V1];external_name=Thaps24258;logic_name=jgi_thaps3 chr10 ensembl transcript 1042952 1046418 . - . ID=Thaps24258;Parent=Thaps24258;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1042952 1042976 . - 0 ID=Thaps24258;Parent=Thaps24258;rank=4 chr10 . exon 1042952 1042976 . - . ID=Thaps24258.4;Parent=Thaps24258;constitutive=1;ensembl_end_phase=1;rank=4 chr10 . CDS 1043065 1043733 . - 0 ID=Thaps24258;Parent=Thaps24258;rank=3 chr10 . exon 1043065 1043733 . - . ID=Thaps24258.3;Parent=Thaps24258;constitutive=1;rank=3 chr10 . CDS 1043824 1045965 . - 0 ID=Thaps24258;Parent=Thaps24258;rank=2 chr10 . exon 1043824 1045965 . - . ID=Thaps24258.2;Parent=Thaps24258;constitutive=1;rank=2 chr10 . CDS 1046138 1046418 . - 0 ID=Thaps24258;Parent=Thaps24258;rank=1 chr10 . exon 1036239 1039082 . - . ID=Thaps269540.2;Parent=Thaps269540;constitutive=1;rank=2 chr10 . exon 1040062 1040100 . - . ID=Thaps269540.1;Parent=Thaps269540;constitutive=1;rank=1 chr10 . repeat_region 1046686 1046722 . ? . description=trf chr10 . repeat_region 1054065 1054078 . ? . description=dust chr10 . exon 1046138 1046418 . - . ID=Thaps24258.1;Parent=Thaps24258;constitutive=1;ensembl_end_phase=2;rank=1 chr10 ensembl protein_coding_gene 1055248 1055926 . + . ID=Thaps24260;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8V6];external_name=Thaps24260;logic_name=jgi_thaps3 chr10 ensembl transcript 1055248 1055926 . + . ID=Thaps24260;Parent=Thaps24260;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1055248 1055649 . + 0 ID=Thaps24260;Parent=Thaps24260;rank=1 chr10 . exon 1055248 1055649 . + . ID=Thaps24260.1;Parent=Thaps24260;constitutive=1;rank=1 chr10 . CDS 1055723 1055926 . + 0 ID=Thaps24260;Parent=Thaps24260;rank=2 chr10 . exon 1055723 1055926 . + . ID=Thaps24260.2;Parent=Thaps24260;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 1053543 1054022 . - . ID=Thaps263742;biotype=protein_coding;description=Synaptobrevin [Source:UniProtKB/TrEMBL%3BAcc:B8C8V5];external_name=Thaps263742;logic_name=jgi_thaps3 chr10 ensembl transcript 1053543 1054022 . - . ID=Thaps263742;Parent=Thaps263742;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1053543 1054022 . - 0 ID=Thaps263742;Parent=Thaps263742;rank=1 chr10 . exon 1053543 1054022 . - . ID=Thaps263742.1;Parent=Thaps263742;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1051008 1052342 . - . ID=Thaps269541;biotype=protein_coding;description=Peptidase of the M20/M25/M40 family [Source:UniProtKB/TrEMBL%3BAcc:B8C8V4];external_name=Thaps269541;logic_name=jgi_thaps3 chr10 ensembl transcript 1051008 1052342 . - . ID=Thaps269541;Parent=Thaps269541;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1051008 1051138 . - 0 ID=Thaps269541;Parent=Thaps269541;rank=4 chr10 . exon 1051008 1051138 . - . ID=Thaps269541.4;Parent=Thaps269541;constitutive=1;ensembl_end_phase=2;rank=4 chr10 . CDS 1051214 1052042 . - 0 ID=Thaps269541;Parent=Thaps269541;rank=3 chr10 . exon 1051214 1052042 . - . ID=Thaps269541.3;Parent=Thaps269541;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 1052088 1052167 . - 0 ID=Thaps269541;Parent=Thaps269541;rank=2 chr10 . exon 1052088 1052167 . - . ID=Thaps269541.2;Parent=Thaps269541;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 1052261 1052342 . - 0 ID=Thaps269541;Parent=Thaps269541;rank=1 chr10 . exon 1052261 1052342 . - . ID=Thaps269541.1;Parent=Thaps269541;constitutive=1;ensembl_end_phase=1;rank=1 chr10 ensembl protein_coding_gene 1047314 1047903 . + . ID=Thaps8598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8V2];external_name=Thaps8598;logic_name=jgi_thaps3 chr10 ensembl transcript 1047314 1047903 . + . ID=Thaps8598;Parent=Thaps8598;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1047314 1047376 . + 0 ID=Thaps8598;Parent=Thaps8598;rank=1 chr10 . exon 1047314 1047376 . + . ID=Thaps8598.1;Parent=Thaps8598;constitutive=1;rank=1 chr10 . CDS 1047397 1047903 . + 0 ID=Thaps8598;Parent=Thaps8598;rank=2 chr10 . exon 1047397 1047903 . + . ID=Thaps8598.2;Parent=Thaps8598;constitutive=1;rank=2 chr10 ensembl protein_coding_gene 1048849 1050650 . - . ID=Thaps8599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8V3];external_name=Thaps8599;logic_name=jgi_thaps3 chr10 ensembl transcript 1048849 1050650 . - . ID=Thaps8599;Parent=Thaps8599;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1048849 1049986 . - 0 ID=Thaps8599;Parent=Thaps8599;rank=3 chr10 . exon 1048849 1049986 . - . ID=Thaps8599.3;Parent=Thaps8599;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . CDS 1050040 1050124 . - 0 ID=Thaps8599;Parent=Thaps8599;rank=2 chr10 . exon 1050040 1050124 . - . ID=Thaps8599.2;Parent=Thaps8599;constitutive=1;ensembl_end_phase=1;rank=2 chr10 . CDS 1050218 1050650 . - 0 ID=Thaps8599;Parent=Thaps8599;rank=1 chr10 . exon 1050218 1050650 . - . ID=Thaps8599.1;Parent=Thaps8599;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . repeat_region 1065076 1065223 . + . description=SAT1_TP chr10 . repeat_region 1065221 1065394 . + . description=SAT1_TP chr10 . repeat_region 1065395 1065566 . + . description=SAT1_TP chr10 . repeat_region 1065567 1065740 . + . description=SAT1_TP chr10 . repeat_region 1065741 1065913 . + . description=SAT1_TP chr10 ensembl protein_coding_gene 1056513 1057445 . - . ID=Thaps24261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8V7];external_name=Thaps24261;logic_name=jgi_thaps3 chr10 ensembl transcript 1056513 1057445 . - . ID=Thaps24261;Parent=Thaps24261;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1056513 1057445 . - 0 ID=Thaps24261;Parent=Thaps24261;rank=1 chr10 . exon 1056513 1057445 . - . ID=Thaps24261.1;Parent=Thaps24261;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1058134 1058922 . + . ID=Thaps24262;biotype=protein_coding;description=RS2%2C ribosomal protein 2 [Source:UniProtKB/TrEMBL%3BAcc:B8C8V8];external_name=RS2;logic_name=jgi_thaps3 chr10 ensembl transcript 1058134 1058922 . + . ID=Thaps24262;Parent=Thaps24262;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1058134 1058922 . + 0 ID=Thaps24262;Parent=Thaps24262;rank=1 chr10 . exon 1058134 1058922 . + . ID=Thaps24262.1;Parent=Thaps24262;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1059473 1060138 . + . ID=Thaps36456;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8V9];external_name=Thaps36456;logic_name=jgi_thaps3 chr10 ensembl transcript 1059473 1060138 . + . ID=Thaps36456;Parent=Thaps36456;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1059473 1060138 . + 0 ID=Thaps36456;Parent=Thaps36456;rank=1 chr10 . exon 1059473 1060138 . + . ID=Thaps36456.1;Parent=Thaps36456;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1061137 1064088 . + . ID=Thaps8608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8W0];external_name=Thaps8608;logic_name=jgi_thaps3 chr10 ensembl transcript 1061137 1064088 . + . ID=Thaps8608;Parent=Thaps8608;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1061137 1061515 . + 0 ID=Thaps8608;Parent=Thaps8608;rank=1 chr10 . exon 1061137 1061515 . + . ID=Thaps8608.1;Parent=Thaps8608;constitutive=1;ensembl_end_phase=1;rank=1 chr10 . CDS 1062266 1062417 . + 0 ID=Thaps8608;Parent=Thaps8608;rank=2 chr10 . exon 1062266 1062417 . + . ID=Thaps8608.2;Parent=Thaps8608;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 1062830 1063729 . + 0 ID=Thaps8608;Parent=Thaps8608;rank=3 chr10 . exon 1062830 1063729 . + . ID=Thaps8608.3;Parent=Thaps8608;constitutive=1;rank=3 chr10 . CDS 1063930 1064088 . + 0 ID=Thaps8608;Parent=Thaps8608;rank=4 chr10 . exon 1063930 1064088 . + . ID=Thaps8608.4;Parent=Thaps8608;constitutive=1;rank=4 chr10 . repeat_region 1065134 1066117 . ? . description=trf chr10 . repeat_region 1065134 1066117 . ? . description=trf chr10 . repeat_region 1071194 1071201 . ? . description=dust chr10 ensembl protein_coding_gene 1069904 1074301 . + . ID=Thaps24267;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8W2];external_name=Thaps24267;logic_name=jgi_thaps3 chr10 ensembl transcript 1069904 1074301 . + . ID=Thaps24267;Parent=Thaps24267;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1069904 1074301 . + 0 ID=Thaps24267;Parent=Thaps24267;rank=1 chr10 . exon 1069904 1074301 . + . ID=Thaps24267.1;Parent=Thaps24267;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1067474 1068196 . - . ID=Thaps29547;biotype=protein_coding;description=Probable purine-nucleoside phosphorylase [Source:UniProtKB/TrEMBL%3BAcc:B8C8W1];external_name=PNP1;logic_name=jgi_thaps3 chr10 ensembl transcript 1067474 1068196 . - . ID=Thaps29547;Parent=Thaps29547;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1067474 1068196 . - 0 ID=Thaps29547;Parent=Thaps29547;rank=1 chr10 . exon 1067474 1068196 . - . ID=Thaps29547.1;Parent=Thaps29547;constitutive=1;rank=1 chr10 ensembl protein_coding_gene 1074895 1077497 . + . ID=Thaps8611;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8W3];external_name=Thaps8611;logic_name=jgi_thaps3 chr10 ensembl transcript 1074895 1077497 . + . ID=Thaps8611;Parent=Thaps8611;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1074895 1075086 . + 0 ID=Thaps8611;Parent=Thaps8611;rank=1 chr10 . exon 1074895 1075086 . + . ID=Thaps8611.1;Parent=Thaps8611;constitutive=1;rank=1 chr10 . CDS 1075187 1075480 . + 0 ID=Thaps8611;Parent=Thaps8611;rank=2 chr10 . exon 1075187 1075480 . + . ID=Thaps8611.2;Parent=Thaps8611;constitutive=1;rank=2 chr10 . CDS 1075565 1076083 . + 0 ID=Thaps8611;Parent=Thaps8611;rank=3 chr10 . exon 1075565 1076083 . + . ID=Thaps8611.3;Parent=Thaps8611;constitutive=1;rank=3 chr10 . CDS 1076115 1076348 . + 0 ID=Thaps8611;Parent=Thaps8611;rank=4 chr10 . CDS 1076483 1076513 . + 0 ID=Thaps8611;Parent=Thaps8611;rank=5 chr10 . CDS 1076585 1077037 . + 0 ID=Thaps8611;Parent=Thaps8611;rank=6 chr10 . CDS 1077262 1077497 . + 0 ID=Thaps8611;Parent=Thaps8611;rank=7 chr10 . repeat_region 1084474 1084554 . - . description=MuDR1_TP chr10 ensembl protein_coding_gene 1079044 1079787 . - . ID=Thaps263745;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8W4];external_name=Thaps263745;logic_name=jgi_thaps3 chr10 ensembl transcript 1079044 1079787 . - . ID=Thaps263745;Parent=Thaps263745;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1079044 1079220 . - 0 ID=Thaps263745;Parent=Thaps263745;rank=3 chr10 . exon 1079044 1079220 . - . ID=Thaps263745.3;Parent=Thaps263745;constitutive=1;rank=3 chr10 . CDS 1079264 1079415 . - 0 ID=Thaps263745;Parent=Thaps263745;rank=2 chr10 . exon 1079264 1079415 . - . ID=Thaps263745.2;Parent=Thaps263745;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . CDS 1079497 1079787 . - 0 ID=Thaps263745;Parent=Thaps263745;rank=1 chr10 . exon 1079497 1079787 . - . ID=Thaps263745.1;Parent=Thaps263745;constitutive=1;rank=1 chr10 . exon 1076115 1076348 . + . ID=Thaps8611.4;Parent=Thaps8611;constitutive=1;rank=4 chr10 . exon 1076483 1076513 . + . ID=Thaps8611.5;Parent=Thaps8611;constitutive=1;ensembl_end_phase=1;rank=5 chr10 . exon 1076585 1077037 . + . ID=Thaps8611.6;Parent=Thaps8611;constitutive=1;rank=6 chr10 . exon 1077262 1077497 . + . ID=Thaps8611.7;Parent=Thaps8611;constitutive=1;ensembl_end_phase=2;rank=7 chr10 ensembl protein_coding_gene 1085036 1089583 . + . ID=Thaps8613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8W5];external_name=Thaps8613;logic_name=jgi_thaps3 chr10 ensembl transcript 1085036 1089583 . + . ID=Thaps8613;Parent=Thaps8613;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1085036 1086037 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=1 chr10 . exon 1085036 1086037 . + . ID=Thaps8613.1;Parent=Thaps8613;constitutive=1;rank=1 chr10 . CDS 1086392 1086609 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=2 chr10 . CDS 1086692 1086824 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=3 chr10 . CDS 1086926 1087210 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=4 chr10 . CDS 1087342 1087536 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=5 chr10 . CDS 1087671 1087676 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=6 chr10 . CDS 1087769 1087890 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=7 chr10 . CDS 1088228 1088424 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=8 chr10 . CDS 1088503 1088722 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=9 chr10 . CDS 1088850 1089016 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=10 chr10 . CDS 1089093 1089293 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=11 chr10 . CDS 1089372 1089583 . + 0 ID=Thaps8613;Parent=Thaps8613;rank=12 chr10 . repeat_region 1087100 1087108 . ? . description=dust chr10 . repeat_region 1087693 1087714 . ? . description=trf chr10 . repeat_region 1091460 1091495 . ? . description=dust chr10 . repeat_region 1091470 1091493 . ? . description=trf chr10 . repeat_region 1092500 1092542 . ? . description=trf chr10 . repeat_region 1092501 1092542 . ? . description=dust chr10 . repeat_region 1093017 1093069 . ? . description=dust chr10 . repeat_region 1093027 1093069 . ? . description=trf chr10 . repeat_region 1094073 1094111 . ? . description=trf chr10 . repeat_region 1094073 1094111 . ? . description=dust chr10 . repeat_region 1094586 1094638 . ? . description=dust chr10 . repeat_region 1094596 1094638 . ? . description=trf chr10 . repeat_region 1095220 1096108 . ? . description=trf chr10 . repeat_region 1095390 1095429 . ? . description=trf chr10 . repeat_region 1095643 1095670 . ? . description=trf chr10 . exon 1086392 1086609 . + . ID=Thaps8613.2;Parent=Thaps8613;constitutive=1;ensembl_end_phase=2;rank=2 chr10 . exon 1086692 1086824 . + . ID=Thaps8613.3;Parent=Thaps8613;constitutive=1;ensembl_end_phase=1;rank=3 chr10 . exon 1086926 1087210 . + . ID=Thaps8613.4;Parent=Thaps8613;constitutive=1;rank=4 chr10 . exon 1087342 1087536 . + . ID=Thaps8613.5;Parent=Thaps8613;constitutive=1;rank=5 chr10 . exon 1087671 1087676 . + . ID=Thaps8613.6;Parent=Thaps8613;constitutive=1;rank=6 chr10 . exon 1087769 1087890 . + . ID=Thaps8613.7;Parent=Thaps8613;constitutive=1;ensembl_end_phase=2;rank=7 chr10 . exon 1088228 1088424 . + . ID=Thaps8613.8;Parent=Thaps8613;constitutive=1;ensembl_end_phase=2;rank=8 chr10 . exon 1088503 1088722 . + . ID=Thaps8613.9;Parent=Thaps8613;constitutive=1;ensembl_end_phase=1;rank=9 chr10 . exon 1088850 1089016 . + . ID=Thaps8613.10;Parent=Thaps8613;constitutive=1;ensembl_end_phase=2;rank=10 chr10 . exon 1089093 1089293 . + . ID=Thaps8613.11;Parent=Thaps8613;constitutive=1;rank=11 chr10 . exon 1089372 1089583 . + . ID=Thaps8613.12;Parent=Thaps8613;constitutive=1;ensembl_end_phase=2;rank=12 chr10 ensembl protein_coding_gene 1102254 1104392 . + . ID=Thaps8614;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8W6];external_name=Thaps8614;logic_name=jgi_thaps3 chr10 ensembl transcript 1102254 1104392 . + . ID=Thaps8614;Parent=Thaps8614;biotype=protein_coding;logic_name=jgi_thaps3 chr10 . CDS 1102254 1102298 . + 0 ID=Thaps8614;Parent=Thaps8614;rank=1 chr10 . exon 1102254 1102298 . + . ID=Thaps8614.1;Parent=Thaps8614;constitutive=1;rank=1 chr10 . CDS 1102407 1102445 . + 0 ID=Thaps8614;Parent=Thaps8614;rank=2 chr10 . exon 1102407 1102445 . + . ID=Thaps8614.2;Parent=Thaps8614;constitutive=1;rank=2 chr10 . CDS 1102666 1102731 . + 0 ID=Thaps8614;Parent=Thaps8614;rank=3 chr10 . exon 1102666 1102731 . + . ID=Thaps8614.3;Parent=Thaps8614;constitutive=1;rank=3 chr10 . CDS 1102930 1102968 . + 0 ID=Thaps8614;Parent=Thaps8614;rank=4 chr10 . exon 1102930 1102968 . + . ID=Thaps8614.4;Parent=Thaps8614;constitutive=1;rank=4 chr10 . CDS 1103325 1103348 . + 0 ID=Thaps8614;Parent=Thaps8614;rank=5 chr10 . exon 1103325 1103348 . + . ID=Thaps8614.5;Parent=Thaps8614;constitutive=1;rank=5 chr10 . CDS 1103463 1103484 . + 0 ID=Thaps8614;Parent=Thaps8614;rank=6 chr10 . exon 1103463 1103484 . + . ID=Thaps8614.6;Parent=Thaps8614;constitutive=1;ensembl_end_phase=1;rank=6 chr10 . CDS 1103655 1104100 . + 0 ID=Thaps8614;Parent=Thaps8614;rank=7 chr10 . exon 1103655 1104100 . + . ID=Thaps8614.7;Parent=Thaps8614;constitutive=1;ensembl_end_phase=2;rank=7 chr10 . CDS 1104188 1104223 . + 0 ID=Thaps8614;Parent=Thaps8614;rank=8 chr10 . exon 1104188 1104223 . + . ID=Thaps8614.8;Parent=Thaps8614;constitutive=1;rank=8 chr10 . CDS 1104321 1104392 . + 0 ID=Thaps8614;Parent=Thaps8614;rank=9 chr10 . exon 1104321 1104392 . + . ID=Thaps8614.9;Parent=Thaps8614;constitutive=1;rank=9 ##gff-version 3 ##sequence-region 12 1 1128382 chr12 . repeat_region 1 246 . ? . description=trf chr12 . repeat_region 1 246 . ? . description=dust chr12 . repeat_region 5048 5067 . ? . description=trf chr12 . repeat_region 5868 5919 . ? . description=dust chr12 . repeat_region 6016 6037 . ? . description=trf chr12 . repeat_region 6016 6037 . ? . description=dust chr12 . repeat_region 6422 7608 . ? . description=dust chr12 ensembl protein_coding_gene 804 8527 . - . ID=Thaps269593;biotype=protein_coding;description=26S proteasome ATPase regulatory subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C9V9];external_name=RPT4;logic_name=jgi_thaps3 chr12 ensembl transcript 804 8527 . - . ID=Thaps269593;Parent=Thaps269593;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 804 1478 . - 0 ID=Thaps269593;Parent=Thaps269593;rank=4 chr12 . exon 804 1478 . - . ID=Thaps269593.4;Parent=Thaps269593;constitutive=1;rank=4 chr12 . CDS 1671 2148 . - 0 ID=Thaps269593;Parent=Thaps269593;rank=3 chr12 . exon 1671 2148 . - . ID=Thaps269593.3;Parent=Thaps269593;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 8077 8125 . - 0 ID=Thaps269593;Parent=Thaps269593;rank=2 chr12 . exon 8077 8125 . - . ID=Thaps269593.2;Parent=Thaps269593;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 8488 8527 . - 0 ID=Thaps269593;Parent=Thaps269593;rank=1 chr12 . exon 8488 8527 . - . ID=Thaps269593.1;Parent=Thaps269593;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 10885 11193 . - . ID=Thaps8924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9W0];external_name=Thaps8924;logic_name=jgi_thaps3 chr12 ensembl transcript 10885 11193 . - . ID=Thaps8924;Parent=Thaps8924;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 10885 11193 . - 0 ID=Thaps8924;Parent=Thaps8924;rank=1 chr12 . exon 10885 11193 . - . ID=Thaps8924.1;Parent=Thaps8924;constitutive=1;rank=1 chr12 . repeat_region 11808 30846 . ? . description=dust chr12 . repeat_region 36902 37062 . ? . description=trf chr12 . repeat_region 37041 37242 . ? . description=trf chr12 . repeat_region 38979 39021 . ? . description=trf chr12 . repeat_region 39421 39445 . ? . description=trf chr12 ensembl protein_coding_gene 30979 32186 . + . ID=Thaps263852;biotype=protein_coding;description=Sulfate permease [Source:UniProtKB/TrEMBL%3BAcc:B8C9W1];external_name=Thaps263852;logic_name=jgi_thaps3 chr12 ensembl transcript 30979 32186 . + . ID=Thaps263852;Parent=Thaps263852;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 30979 31383 . + 0 ID=Thaps263852;Parent=Thaps263852;rank=1 chr12 . exon 30979 31383 . + . ID=Thaps263852.1;Parent=Thaps263852;constitutive=1;rank=1 chr12 . CDS 31489 31627 . + 0 ID=Thaps263852;Parent=Thaps263852;rank=2 chr12 . exon 31489 31627 . + . ID=Thaps263852.2;Parent=Thaps263852;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 31760 32186 . + 0 ID=Thaps263852;Parent=Thaps263852;rank=3 chr12 . exon 31760 32186 . + . ID=Thaps263852.3;Parent=Thaps263852;constitutive=1;ensembl_end_phase=1;rank=3 chr12 ensembl protein_coding_gene 33076 35351 . - . ID=Thaps8926;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9W2];external_name=Thaps8926;logic_name=jgi_thaps3 chr12 ensembl transcript 33076 35351 . - . ID=Thaps8926;Parent=Thaps8926;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 33076 34005 . - 0 ID=Thaps8926;Parent=Thaps8926;rank=2 chr12 . exon 33076 34005 . - . ID=Thaps8926.2;Parent=Thaps8926;constitutive=1;rank=2 chr12 . CDS 34104 35351 . - 0 ID=Thaps8926;Parent=Thaps8926;rank=1 chr12 . exon 34104 35351 . - . ID=Thaps8926.1;Parent=Thaps8926;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 35754 37894 . + . ID=Thaps8927;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9W3];external_name=Thaps8927;logic_name=jgi_thaps3 chr12 ensembl transcript 35754 37894 . + . ID=Thaps8927;Parent=Thaps8927;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 35754 36479 . + 0 ID=Thaps8927;Parent=Thaps8927;rank=1 chr12 . exon 35754 36479 . + . ID=Thaps8927.1;Parent=Thaps8927;constitutive=1;rank=1 chr12 . CDS 36599 37750 . + 0 ID=Thaps8927;Parent=Thaps8927;rank=2 chr12 . exon 36599 37750 . + . ID=Thaps8927.2;Parent=Thaps8927;constitutive=1;rank=2 chr12 . CDS 37787 37894 . + 0 ID=Thaps8927;Parent=Thaps8927;rank=3 chr12 . exon 37787 37894 . + . ID=Thaps8927.3;Parent=Thaps8927;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 38213 39364 . - . ID=Thaps8928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9W4];external_name=Thaps8928;logic_name=jgi_thaps3 chr12 ensembl transcript 38213 39364 . - . ID=Thaps8928;Parent=Thaps8928;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 38213 39364 . - 0 ID=Thaps8928;Parent=Thaps8928;rank=1 chr12 . exon 38213 39364 . - . ID=Thaps8928.1;Parent=Thaps8928;constitutive=1;rank=1 chr12 . repeat_region 40769 40818 . ? . description=dust chr12 . repeat_region 48521 48528 . ? . description=dust chr12 ensembl rRNA_gene 45175 45288 . + . ID=EPrTPOG00000000073;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr12 ensembl rRNA 45175 45288 . + . ID=EPrTPOT00000000073;Parent=EPrTPOG00000000073;biotype=rRNA;logic_name=ncrna_eg chr12 . exon 45175 45288 . + . ID=EPrTPOE00000000073;Parent=EPrTPOT00000000073;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 40431 43595 . + . ID=Thaps24408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9W5];external_name=Thaps24408;logic_name=jgi_thaps3 chr12 ensembl transcript 40431 43595 . + . ID=Thaps24408;Parent=Thaps24408;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 40431 43595 . + 0 ID=Thaps24408;Parent=Thaps24408;rank=1 chr12 . exon 40431 43595 . + . ID=Thaps24408.1;Parent=Thaps24408;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 45608 50098 . + . ID=Thaps24409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9W7];external_name=Thaps24409;logic_name=jgi_thaps3 chr12 ensembl transcript 45608 50098 . + . ID=Thaps24409;Parent=Thaps24409;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 45608 47556 . + 0 ID=Thaps24409;Parent=Thaps24409;rank=1 chr12 . exon 45608 47556 . + . ID=Thaps24409.1;Parent=Thaps24409;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 47702 47759 . + 0 ID=Thaps24409;Parent=Thaps24409;rank=2 chr12 . exon 47702 47759 . + . ID=Thaps24409.2;Parent=Thaps24409;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 47871 48221 . + 0 ID=Thaps24409;Parent=Thaps24409;rank=3 chr12 . exon 47871 48221 . + . ID=Thaps24409.3;Parent=Thaps24409;constitutive=1;rank=3 chr12 . CDS 48311 50098 . + 0 ID=Thaps24409;Parent=Thaps24409;rank=4 chr12 . exon 48311 50098 . + . ID=Thaps24409.4;Parent=Thaps24409;constitutive=1;rank=4 chr12 ensembl protein_coding_gene 43743 44564 . - . ID=Thaps8930;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9W6];external_name=Thaps8930;logic_name=jgi_thaps3 chr12 ensembl transcript 43743 44564 . - . ID=Thaps8930;Parent=Thaps8930;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 43743 44564 . - 0 ID=Thaps8930;Parent=Thaps8930;rank=1 chr12 . exon 43743 44564 . - . ID=Thaps8930.1;Parent=Thaps8930;constitutive=1;rank=1 chr12 . repeat_region 55749 55768 . ? . description=trf chr12 ensembl protein_coding_gene 56476 56886 . + . ID=Thaps24410;biotype=protein_coding;description=RL32%2C ribosomal protein 32 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C9W9];external_name=RL32;logic_name=jgi_thaps3 chr12 ensembl transcript 56476 56886 . + . ID=Thaps24410;Parent=Thaps24410;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 56476 56886 . + 0 ID=Thaps24410;Parent=Thaps24410;rank=1 chr12 . exon 56476 56886 . + . ID=Thaps24410.1;Parent=Thaps24410;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 50374 56080 . - . ID=Thaps8932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9W8];external_name=Thaps8932;logic_name=jgi_thaps3 chr12 ensembl transcript 50374 56080 . - . ID=Thaps8932;Parent=Thaps8932;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 50374 50403 . - 0 ID=Thaps8932;Parent=Thaps8932;rank=5 chr12 . exon 50374 50403 . - . ID=Thaps8932.5;Parent=Thaps8932;constitutive=1;rank=5 chr12 . CDS 50499 51175 . - 0 ID=Thaps8932;Parent=Thaps8932;rank=4 chr12 . exon 50499 51175 . - . ID=Thaps8932.4;Parent=Thaps8932;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 51248 51299 . - 0 ID=Thaps8932;Parent=Thaps8932;rank=3 chr12 . exon 51248 51299 . - . ID=Thaps8932.3;Parent=Thaps8932;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 51423 55277 . - 0 ID=Thaps8932;Parent=Thaps8932;rank=2 chr12 . exon 51423 55277 . - . ID=Thaps8932.2;Parent=Thaps8932;constitutive=1;rank=2 chr12 . CDS 55307 56080 . - 0 ID=Thaps8932;Parent=Thaps8932;rank=1 chr12 . exon 55307 56080 . - . ID=Thaps8932.1;Parent=Thaps8932;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 57733 62394 . - . ID=Thaps8934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9X0];external_name=Thaps8934;logic_name=jgi_thaps3 chr12 ensembl transcript 57733 62394 . - . ID=Thaps8934;Parent=Thaps8934;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 57733 59556 . - 0 ID=Thaps8934;Parent=Thaps8934;rank=7 chr12 . exon 57733 59556 . - . ID=Thaps8934.7;Parent=Thaps8934;constitutive=1;rank=7 chr12 . CDS 59640 59894 . - 0 ID=Thaps8934;Parent=Thaps8934;rank=6 chr12 . exon 59640 59894 . - . ID=Thaps8934.6;Parent=Thaps8934;constitutive=1;rank=6 chr12 . CDS 59993 60193 . - 0 ID=Thaps8934;Parent=Thaps8934;rank=5 chr12 . CDS 60290 60502 . - 0 ID=Thaps8934;Parent=Thaps8934;rank=4 chr12 . CDS 60601 60801 . - 0 ID=Thaps8934;Parent=Thaps8934;rank=3 chr12 . CDS 60898 61488 . - 0 ID=Thaps8934;Parent=Thaps8934;rank=2 chr12 . CDS 61588 62394 . - 0 ID=Thaps8934;Parent=Thaps8934;rank=1 chr12 . repeat_region 64542 64571 . ? . description=dust chr12 ensembl protein_coding_gene 64703 68842 . - . ID=Thaps693;biotype=protein_coding;description=5-methyltretrahydrofolate-homocysteine s-methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C9X1];external_name=MHMT1;logic_name=jgi_thaps3 chr12 ensembl transcript 64703 68842 . - . ID=Thaps693;Parent=Thaps693;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 64703 65569 . - 0 ID=Thaps693;Parent=Thaps693;rank=5 chr12 . exon 64703 65569 . - . ID=Thaps693.5;Parent=Thaps693;constitutive=1;rank=5 chr12 . CDS 65655 65834 . - 0 ID=Thaps693;Parent=Thaps693;rank=4 chr12 . exon 65655 65834 . - . ID=Thaps693.4;Parent=Thaps693;constitutive=1;rank=4 chr12 . CDS 65922 66355 . - 0 ID=Thaps693;Parent=Thaps693;rank=3 chr12 . exon 65922 66355 . - . ID=Thaps693.3;Parent=Thaps693;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 66455 67050 . - 0 ID=Thaps693;Parent=Thaps693;rank=2 chr12 . exon 66455 67050 . - . ID=Thaps693.2;Parent=Thaps693;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 67164 68842 . - 0 ID=Thaps693;Parent=Thaps693;rank=1 chr12 . exon 67164 68842 . - . ID=Thaps693.1;Parent=Thaps693;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . exon 59993 60193 . - . ID=Thaps8934.5;Parent=Thaps8934;constitutive=1;rank=5 chr12 . exon 60290 60502 . - . ID=Thaps8934.4;Parent=Thaps8934;constitutive=1;rank=4 chr12 . exon 60601 60801 . - . ID=Thaps8934.3;Parent=Thaps8934;constitutive=1;rank=3 chr12 . exon 60898 61488 . - . ID=Thaps8934.2;Parent=Thaps8934;constitutive=1;rank=2 chr12 . exon 61588 62394 . - . ID=Thaps8934.1;Parent=Thaps8934;constitutive=1;rank=1 chr12 . repeat_region 73310 73347 . ? . description=trf chr12 . repeat_region 73636 73682 . ? . description=trf chr12 . repeat_region 74484 74503 . ? . description=trf chr12 . repeat_region 76420 76439 . ? . description=trf chr12 ensembl protein_coding_gene 75933 77779 . - . ID=Thaps24412;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9X4];external_name=Thaps24412;logic_name=jgi_thaps3 chr12 ensembl transcript 75933 77779 . - . ID=Thaps24412;Parent=Thaps24412;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 75933 77622 . - 0 ID=Thaps24412;Parent=Thaps24412;rank=2 chr12 . exon 75933 77622 . - . ID=Thaps24412.2;Parent=Thaps24412;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 77715 77779 . - 0 ID=Thaps24412;Parent=Thaps24412;rank=1 chr12 . exon 77715 77779 . - . ID=Thaps24412.1;Parent=Thaps24412;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 79410 83237 . - . ID=Thaps24413;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9X5];external_name=Thaps24413;logic_name=jgi_thaps3 chr12 ensembl transcript 79410 83237 . - . ID=Thaps24413;Parent=Thaps24413;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 79410 79838 . - 0 ID=Thaps24413;Parent=Thaps24413;rank=5 chr12 . exon 79410 79838 . - . ID=Thaps24413.5;Parent=Thaps24413;constitutive=1;rank=5 chr12 . CDS 79921 80247 . - 0 ID=Thaps24413;Parent=Thaps24413;rank=4 chr12 . CDS 80322 80806 . - 0 ID=Thaps24413;Parent=Thaps24413;rank=3 chr12 . CDS 80885 81888 . - 0 ID=Thaps24413;Parent=Thaps24413;rank=2 chr12 . CDS 81961 83237 . - 0 ID=Thaps24413;Parent=Thaps24413;rank=1 chr12 ensembl protein_coding_gene 71204 72057 . - . ID=Thaps36911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9X2];external_name=Thaps36911;logic_name=jgi_thaps3 chr12 ensembl transcript 71204 72057 . - . ID=Thaps36911;Parent=Thaps36911;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 71204 71697 . - 0 ID=Thaps36911;Parent=Thaps36911;rank=2 chr12 . exon 71204 71697 . - . ID=Thaps36911.2;Parent=Thaps36911;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 71781 72057 . - 0 ID=Thaps36911;Parent=Thaps36911;rank=1 chr12 . exon 71781 72057 . - . ID=Thaps36911.1;Parent=Thaps36911;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 74208 75872 . + . ID=Thaps8937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9X3];external_name=Thaps8937;logic_name=jgi_thaps3 chr12 ensembl transcript 74208 75872 . + . ID=Thaps8937;Parent=Thaps8937;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 74208 75872 . + 0 ID=Thaps8937;Parent=Thaps8937;rank=1 chr12 . exon 74208 75872 . + . ID=Thaps8937.1;Parent=Thaps8937;constitutive=1;rank=1 chr12 . repeat_region 85566 85599 . ? . description=dust chr12 . repeat_region 87779 87808 . ? . description=dust chr12 . exon 79921 80247 . - . ID=Thaps24413.4;Parent=Thaps24413;constitutive=1;rank=4 chr12 . exon 80322 80806 . - . ID=Thaps24413.3;Parent=Thaps24413;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . exon 80885 81888 . - . ID=Thaps24413.2;Parent=Thaps24413;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . exon 81961 83237 . - . ID=Thaps24413.1;Parent=Thaps24413;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 87155 89003 . + . ID=Thaps24414;biotype=protein_coding;description=Methionine aminopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8C9X7];external_name=MAP2;logic_name=jgi_thaps3 chr12 ensembl transcript 87155 89003 . + . ID=Thaps24414;Parent=Thaps24414;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 87155 87254 . + 0 ID=Thaps24414;Parent=Thaps24414;rank=1 chr12 . exon 87155 87254 . + . ID=Thaps24414.1;Parent=Thaps24414;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 87596 87619 . + 0 ID=Thaps24414;Parent=Thaps24414;rank=2 chr12 . exon 87596 87619 . + . ID=Thaps24414.2;Parent=Thaps24414;constitutive=1;rank=2 chr12 . CDS 87696 88375 . + 0 ID=Thaps24414;Parent=Thaps24414;rank=3 chr12 . exon 87696 88375 . + . ID=Thaps24414.3;Parent=Thaps24414;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 88500 89003 . + 0 ID=Thaps24414;Parent=Thaps24414;rank=4 chr12 . exon 88500 89003 . + . ID=Thaps24414.4;Parent=Thaps24414;constitutive=1;rank=4 chr12 ensembl protein_coding_gene 85358 86446 . - . ID=Thaps8940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9X6];external_name=Thaps8940;logic_name=jgi_thaps3 chr12 ensembl transcript 85358 86446 . - . ID=Thaps8940;Parent=Thaps8940;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 85358 86446 . - 0 ID=Thaps8940;Parent=Thaps8940;rank=1 chr12 . exon 85358 86446 . - . ID=Thaps8940.1;Parent=Thaps8940;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 89211 92012 . - . ID=Thaps8942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9X8];external_name=Thaps8942;logic_name=jgi_thaps3 chr12 ensembl transcript 89211 92012 . - . ID=Thaps8942;Parent=Thaps8942;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 89211 89233 . - 0 ID=Thaps8942;Parent=Thaps8942;rank=3 chr12 . exon 89211 89233 . - . ID=Thaps8942.3;Parent=Thaps8942;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 89370 91726 . - 0 ID=Thaps8942;Parent=Thaps8942;rank=2 chr12 . exon 89370 91726 . - . ID=Thaps8942.2;Parent=Thaps8942;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 91891 92012 . - 0 ID=Thaps8942;Parent=Thaps8942;rank=1 chr12 . repeat_region 93763 93840 . + . description=TE2c_TP chr12 . repeat_region 94028 94069 . ? . description=trf chr12 . repeat_region 94256 94703 . + . description=Harbinger2N_TP chr12 . repeat_region 96695 96743 . ? . description=trf chr12 ensembl protein_coding_gene 92747 93088 . - . ID=Thaps24415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9X9];external_name=Thaps24415;logic_name=jgi_thaps3 chr12 ensembl transcript 92747 93088 . - . ID=Thaps24415;Parent=Thaps24415;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 92747 93088 . - 0 ID=Thaps24415;Parent=Thaps24415;rank=1 chr12 . exon 92747 93088 . - . ID=Thaps24415.1;Parent=Thaps24415;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 97585 101437 . - . ID=Thaps24416;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y2];external_name=Thaps24416;logic_name=jgi_thaps3 chr12 ensembl transcript 97585 101437 . - . ID=Thaps24416;Parent=Thaps24416;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 97585 98155 . - 0 ID=Thaps24416;Parent=Thaps24416;rank=7 chr12 . exon 97585 98155 . - . ID=Thaps24416.7;Parent=Thaps24416;constitutive=1;ensembl_end_phase=1;rank=7 chr12 . CDS 98192 98262 . - 0 ID=Thaps24416;Parent=Thaps24416;rank=6 chr12 . exon 98192 98262 . - . ID=Thaps24416.6;Parent=Thaps24416;constitutive=1;ensembl_end_phase=2;rank=6 chr12 . CDS 98299 99294 . - 0 ID=Thaps24416;Parent=Thaps24416;rank=5 chr12 . exon 98299 99294 . - . ID=Thaps24416.5;Parent=Thaps24416;constitutive=1;rank=5 chr12 . CDS 99339 99542 . - 0 ID=Thaps24416;Parent=Thaps24416;rank=4 chr12 . exon 99339 99542 . - . ID=Thaps24416.4;Parent=Thaps24416;constitutive=1;rank=4 chr12 . CDS 99831 100466 . - 0 ID=Thaps24416;Parent=Thaps24416;rank=3 chr12 . exon 99831 100466 . - . ID=Thaps24416.3;Parent=Thaps24416;constitutive=1;rank=3 chr12 . CDS 100549 100600 . - 0 ID=Thaps24416;Parent=Thaps24416;rank=2 chr12 . CDS 100659 101437 . - 0 ID=Thaps24416;Parent=Thaps24416;rank=1 chr12 ensembl protein_coding_gene 95708 96608 . + . ID=Thaps36909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y0];external_name=Thaps36909;logic_name=jgi_thaps3 chr12 ensembl transcript 95708 96608 . + . ID=Thaps36909;Parent=Thaps36909;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 95708 96303 . + 0 ID=Thaps36909;Parent=Thaps36909;rank=1 chr12 . exon 95708 96303 . + . ID=Thaps36909.1;Parent=Thaps36909;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 96407 96608 . + 0 ID=Thaps36909;Parent=Thaps36909;rank=2 chr12 . exon 96407 96608 . + . ID=Thaps36909.2;Parent=Thaps36909;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 91891 92012 . - . ID=Thaps8942.1;Parent=Thaps8942;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 96839 97393 . + . ID=Thaps8945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y1];external_name=Thaps8945;logic_name=jgi_thaps3 chr12 ensembl transcript 96839 97393 . + . ID=Thaps8945;Parent=Thaps8945;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 96839 97393 . + 0 ID=Thaps8945;Parent=Thaps8945;rank=1 chr12 . exon 96839 97393 . + . ID=Thaps8945.1;Parent=Thaps8945;constitutive=1;rank=1 chr12 . exon 100549 100600 . - . ID=Thaps24416.2;Parent=Thaps24416;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 100659 101437 . - . ID=Thaps24416.1;Parent=Thaps24416;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 101808 111551 . - . ID=Thaps24417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y3];external_name=Thaps24417;logic_name=jgi_thaps3 chr12 ensembl transcript 101808 111551 . - . ID=Thaps24417;Parent=Thaps24417;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 101808 102064 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=17 chr12 . exon 101808 102064 . - . ID=Thaps24417.17;Parent=Thaps24417;constitutive=1;ensembl_end_phase=2;rank=17 chr12 . CDS 102156 103608 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=16 chr12 . exon 102156 103608 . - . ID=Thaps24417.16;Parent=Thaps24417;constitutive=1;ensembl_end_phase=1;rank=16 chr12 . CDS 103681 104098 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=15 chr12 . exon 103681 104098 . - . ID=Thaps24417.15;Parent=Thaps24417;constitutive=1;ensembl_end_phase=1;rank=15 chr12 . CDS 104184 104322 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=14 chr12 . exon 104184 104322 . - . ID=Thaps24417.14;Parent=Thaps24417;constitutive=1;ensembl_end_phase=1;rank=14 chr12 . CDS 104421 104564 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=13 chr12 . exon 104421 104564 . - . ID=Thaps24417.13;Parent=Thaps24417;constitutive=1;rank=13 chr12 . CDS 104638 105115 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=12 chr12 . exon 104638 105115 . - . ID=Thaps24417.12;Parent=Thaps24417;constitutive=1;ensembl_end_phase=1;rank=12 chr12 . CDS 105200 105974 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=11 chr12 . exon 105200 105974 . - . ID=Thaps24417.11;Parent=Thaps24417;constitutive=1;ensembl_end_phase=1;rank=11 chr12 . CDS 106093 106558 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=10 chr12 . exon 106093 106558 . - . ID=Thaps24417.10;Parent=Thaps24417;constitutive=1;ensembl_end_phase=1;rank=10 chr12 . CDS 106645 107108 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=9 chr12 . exon 106645 107108 . - . ID=Thaps24417.9;Parent=Thaps24417;constitutive=1;ensembl_end_phase=2;rank=9 chr12 . CDS 107203 108461 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=8 chr12 . exon 107203 108461 . - . ID=Thaps24417.8;Parent=Thaps24417;constitutive=1;ensembl_end_phase=2;rank=8 chr12 . CDS 108553 108632 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=7 chr12 . exon 108553 108632 . - . ID=Thaps24417.7;Parent=Thaps24417;constitutive=1;ensembl_end_phase=2;rank=7 chr12 . CDS 108713 109988 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=6 chr12 . exon 108713 109988 . - . ID=Thaps24417.6;Parent=Thaps24417;constitutive=1;ensembl_end_phase=1;rank=6 chr12 . CDS 110242 110361 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=5 chr12 . CDS 110440 110535 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=4 chr12 . CDS 110632 110721 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=3 chr12 . CDS 110825 110938 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=2 chr12 . CDS 111207 111551 . - 0 ID=Thaps24417;Parent=Thaps24417;rank=1 chr12 . repeat_region 114548 114598 . ? . description=dust chr12 . repeat_region 115225 115277 . ? . description=trf chr12 . repeat_region 115816 115846 . ? . description=trf chr12 . repeat_region 115816 115846 . ? . description=dust chr12 . repeat_region 118130 118167 . ? . description=trf chr12 . exon 110242 110361 . - . ID=Thaps24417.5;Parent=Thaps24417;constitutive=1;rank=5 chr12 . exon 110440 110535 . - . ID=Thaps24417.4;Parent=Thaps24417;constitutive=1;rank=4 chr12 . exon 110632 110721 . - . ID=Thaps24417.3;Parent=Thaps24417;constitutive=1;rank=3 chr12 . exon 110825 110938 . - . ID=Thaps24417.2;Parent=Thaps24417;constitutive=1;rank=2 chr12 . exon 111207 111551 . - . ID=Thaps24417.1;Parent=Thaps24417;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 112522 115855 . - . ID=Thaps24418;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y4];external_name=Thaps24418;logic_name=jgi_thaps3 chr12 ensembl transcript 112522 115855 . - . ID=Thaps24418;Parent=Thaps24418;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 112522 114443 . - 0 ID=Thaps24418;Parent=Thaps24418;rank=3 chr12 . exon 112522 114443 . - . ID=Thaps24418.3;Parent=Thaps24418;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 114531 115216 . - 0 ID=Thaps24418;Parent=Thaps24418;rank=2 chr12 . exon 114531 115216 . - . ID=Thaps24418.2;Parent=Thaps24418;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 115377 115855 . - 0 ID=Thaps24418;Parent=Thaps24418;rank=1 chr12 . exon 115377 115855 . - . ID=Thaps24418.1;Parent=Thaps24418;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 116239 116928 . - . ID=Thaps29651;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y5];external_name=Thaps29651;logic_name=jgi_thaps3 chr12 ensembl transcript 116239 116928 . - . ID=Thaps29651;Parent=Thaps29651;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 116239 116928 . - 0 ID=Thaps29651;Parent=Thaps29651;rank=1 chr12 . exon 116239 116928 . - . ID=Thaps29651.1;Parent=Thaps29651;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 118397 119366 . + . ID=Thaps36897;biotype=protein_coding;description=Eukaryotic protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y6];external_name=Thaps36897;logic_name=jgi_thaps3 chr12 ensembl transcript 118397 119366 . + . ID=Thaps36897;Parent=Thaps36897;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 118397 118906 . + 0 ID=Thaps36897;Parent=Thaps36897;rank=1 chr12 . exon 118397 118906 . + . ID=Thaps36897.1;Parent=Thaps36897;constitutive=1;rank=1 chr12 . CDS 118998 119092 . + 0 ID=Thaps36897;Parent=Thaps36897;rank=2 chr12 . exon 118998 119092 . + . ID=Thaps36897.2;Parent=Thaps36897;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 119183 119366 . + 0 ID=Thaps36897;Parent=Thaps36897;rank=3 chr12 . exon 119183 119366 . + . ID=Thaps36897.3;Parent=Thaps36897;constitutive=1;ensembl_end_phase=1;rank=3 chr12 ensembl protein_coding_gene 120442 121348 . + . ID=Thaps36889;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y7];external_name=Thaps36889;logic_name=jgi_thaps3 chr12 ensembl transcript 120442 121348 . + . ID=Thaps36889;Parent=Thaps36889;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 120442 121025 . + 0 ID=Thaps36889;Parent=Thaps36889;rank=1 chr12 . exon 120442 121025 . + . ID=Thaps36889.1;Parent=Thaps36889;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 121117 121348 . + 0 ID=Thaps36889;Parent=Thaps36889;rank=2 chr12 . exon 121117 121348 . + . ID=Thaps36889.2;Parent=Thaps36889;constitutive=1;ensembl_end_phase=1;rank=2 chr12 ensembl protein_coding_gene 122183 124337 . + . ID=Thaps8952;biotype=protein_coding;description=Glutamine-fructose 6 phosphae transaminase [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y8];external_name=Thaps8952;logic_name=jgi_thaps3 chr12 ensembl transcript 122183 124337 . + . ID=Thaps8952;Parent=Thaps8952;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 122183 122500 . + 0 ID=Thaps8952;Parent=Thaps8952;rank=1 chr12 . exon 122183 122500 . + . ID=Thaps8952.1;Parent=Thaps8952;constitutive=1;rank=1 chr12 . CDS 122577 123209 . + 0 ID=Thaps8952;Parent=Thaps8952;rank=2 chr12 . exon 122577 123209 . + . ID=Thaps8952.2;Parent=Thaps8952;constitutive=1;rank=2 chr12 . CDS 123255 123832 . + 0 ID=Thaps8952;Parent=Thaps8952;rank=3 chr12 . exon 123255 123832 . + . ID=Thaps8952.3;Parent=Thaps8952;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 123926 124337 . + 0 ID=Thaps8952;Parent=Thaps8952;rank=4 chr12 . exon 123926 124337 . + . ID=Thaps8952.4;Parent=Thaps8952;constitutive=1;ensembl_end_phase=1;rank=4 chr12 ensembl protein_coding_gene 126457 127020 . - . ID=Thaps8953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Y9];external_name=Thaps8953;logic_name=jgi_thaps3 chr12 ensembl transcript 126457 127020 . - . ID=Thaps8953;Parent=Thaps8953;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 126457 127020 . - 0 ID=Thaps8953;Parent=Thaps8953;rank=1 chr12 . exon 126457 127020 . - . ID=Thaps8953.1;Parent=Thaps8953;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 127845 128480 . + . ID=Thaps8954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z0];external_name=Thaps8954;logic_name=jgi_thaps3 chr12 ensembl transcript 127845 128480 . + . ID=Thaps8954;Parent=Thaps8954;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 127845 128480 . + 0 ID=Thaps8954;Parent=Thaps8954;rank=1 chr12 . exon 127845 128480 . + . ID=Thaps8954.1;Parent=Thaps8954;constitutive=1;rank=1 chr12 . repeat_region 130568 130622 . ? . description=trf chr12 ensembl protein_coding_gene 134321 135383 . - . ID=Thaps263859;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z1];external_name=Thaps263859;logic_name=jgi_thaps3 chr12 ensembl transcript 134321 135383 . - . ID=Thaps263859;Parent=Thaps263859;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 134321 134966 . - 0 ID=Thaps263859;Parent=Thaps263859;rank=2 chr12 . exon 134321 134966 . - . ID=Thaps263859.2;Parent=Thaps263859;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 135047 135383 . - 0 ID=Thaps263859;Parent=Thaps263859;rank=1 chr12 . exon 135047 135383 . - . ID=Thaps263859.1;Parent=Thaps263859;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 139449 140604 . + . ID=Thaps8956;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z2];external_name=Thaps8956;logic_name=jgi_thaps3 chr12 ensembl transcript 139449 140604 . + . ID=Thaps8956;Parent=Thaps8956;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 139449 139482 . + 0 ID=Thaps8956;Parent=Thaps8956;rank=1 chr12 . exon 139449 139482 . + . ID=Thaps8956.1;Parent=Thaps8956;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 139574 140604 . + 0 ID=Thaps8956;Parent=Thaps8956;rank=2 chr12 . exon 139574 140604 . + . ID=Thaps8956.2;Parent=Thaps8956;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . repeat_region 149086 149320 . - . description=Copia6LTR_TP chr12 . biological_region 149132 149134 0.999 + . logic_name=eponine chr12 . repeat_region 149321 152763 . - . description=Copia6I_TP chr12 ensembl protein_coding_gene 144347 144784 . + . ID=Thaps24423;biotype=protein_coding;description=Protein 23 of the large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z4];external_name=RPL23;logic_name=jgi_thaps3 chr12 ensembl transcript 144347 144784 . + . ID=Thaps24423;Parent=Thaps24423;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 144347 144784 . + 0 ID=Thaps24423;Parent=Thaps24423;rank=1 chr12 . exon 144347 144784 . + . ID=Thaps24423.1;Parent=Thaps24423;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 143236 143523 . - . ID=Thaps26383;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z3];external_name=Thaps26383;logic_name=jgi_thaps3 chr12 ensembl transcript 143236 143523 . - . ID=Thaps26383;Parent=Thaps26383;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 143236 143523 . - 0 ID=Thaps26383;Parent=Thaps26383;rank=1 chr12 . exon 143236 143523 . - . ID=Thaps26383.1;Parent=Thaps26383;constitutive=1;rank=1 chr12 ensembl gene 149496 149903 . - . ID=Thaps263864;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr12 ensembl transcript 149496 149903 . - . ID=Thaps263864;Parent=Thaps263864;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr12 . exon 149496 149903 . - . ID=Thaps263864.1;Parent=Thaps263864;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 145638 147091 . - . ID=Thaps8959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z5];external_name=Thaps8959;logic_name=jgi_thaps3 chr12 ensembl transcript 145638 147091 . - . ID=Thaps8959;Parent=Thaps8959;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 145638 145800 . - 0 ID=Thaps8959;Parent=Thaps8959;rank=3 chr12 . exon 145638 145800 . - . ID=Thaps8959.3;Parent=Thaps8959;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 145885 146487 . - 0 ID=Thaps8959;Parent=Thaps8959;rank=2 chr12 . exon 145885 146487 . - . ID=Thaps8959.2;Parent=Thaps8959;constitutive=1;rank=2 chr12 . CDS 146586 147091 . - 0 ID=Thaps8959;Parent=Thaps8959;rank=1 chr12 . exon 146586 147091 . - . ID=Thaps8959.1;Parent=Thaps8959;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . repeat_region 153154 153264 . - . description=PtCopiaLikeTe2 chr12 . repeat_region 159544 159875 . + . description=Copia5LTR_TP chr12 . repeat_region 159564 159571 . ? . description=dust chr12 ensembl protein_coding_gene 156061 157458 . + . ID=Thaps24425;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z6];external_name=Thaps24425;logic_name=jgi_thaps3 chr12 ensembl transcript 156061 157458 . + . ID=Thaps24425;Parent=Thaps24425;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 156061 157458 . + 0 ID=Thaps24425;Parent=Thaps24425;rank=1 chr12 . exon 156061 157458 . + . ID=Thaps24425.1;Parent=Thaps24425;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 157773 158920 . - . ID=Thaps36774;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z7];external_name=Thaps36774;logic_name=jgi_thaps3 chr12 ensembl transcript 157773 158920 . - . ID=Thaps36774;Parent=Thaps36774;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 157773 158309 . - 0 ID=Thaps36774;Parent=Thaps36774;rank=4 chr12 . exon 157773 158309 . - . ID=Thaps36774.4;Parent=Thaps36774;constitutive=1;rank=4 chr12 . CDS 158398 158466 . - 0 ID=Thaps36774;Parent=Thaps36774;rank=3 chr12 . exon 158398 158466 . - . ID=Thaps36774.3;Parent=Thaps36774;constitutive=1;rank=3 chr12 . CDS 158582 158736 . - 0 ID=Thaps36774;Parent=Thaps36774;rank=2 chr12 . exon 158582 158736 . - . ID=Thaps36774.2;Parent=Thaps36774;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 158884 158920 . - 0 ID=Thaps36774;Parent=Thaps36774;rank=1 chr12 . exon 158884 158920 . - . ID=Thaps36774.1;Parent=Thaps36774;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . repeat_region 159876 160001 . + . description=Copia5I_TP chr12 ensembl protein_coding_gene 165199 166286 . - . ID=Thaps263866;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z9];external_name=Thaps263866;logic_name=jgi_thaps3 chr12 ensembl transcript 165199 166286 . - . ID=Thaps263866;Parent=Thaps263866;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 165199 165398 . - 0 ID=Thaps263866;Parent=Thaps263866;rank=3 chr12 . exon 165199 165398 . - . ID=Thaps263866.3;Parent=Thaps263866;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 165501 165755 . - 0 ID=Thaps263866;Parent=Thaps263866;rank=2 chr12 . exon 165501 165755 . - . ID=Thaps263866.2;Parent=Thaps263866;constitutive=1;rank=2 chr12 . CDS 165849 166286 . - 0 ID=Thaps263866;Parent=Thaps263866;rank=1 chr12 . exon 165849 166286 . - . ID=Thaps263866.1;Parent=Thaps263866;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 160446 162832 . - . ID=Thaps8962;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C9Z8];external_name=Thaps8962;logic_name=jgi_thaps3 chr12 ensembl transcript 160446 162832 . - . ID=Thaps8962;Parent=Thaps8962;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 160446 161297 . - 0 ID=Thaps8962;Parent=Thaps8962;rank=5 chr12 . exon 160446 161297 . - . ID=Thaps8962.5;Parent=Thaps8962;constitutive=1;rank=5 chr12 . CDS 161378 161980 . - 0 ID=Thaps8962;Parent=Thaps8962;rank=4 chr12 . exon 161378 161980 . - . ID=Thaps8962.4;Parent=Thaps8962;constitutive=1;rank=4 chr12 . CDS 162067 162416 . - 0 ID=Thaps8962;Parent=Thaps8962;rank=3 chr12 . exon 162067 162416 . - . ID=Thaps8962.3;Parent=Thaps8962;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 162530 162578 . - 0 ID=Thaps8962;Parent=Thaps8962;rank=2 chr12 . exon 162530 162578 . - . ID=Thaps8962.2;Parent=Thaps8962;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 162812 162832 . - 0 ID=Thaps8962;Parent=Thaps8962;rank=1 chr12 . exon 162812 162832 . - . ID=Thaps8962.1;Parent=Thaps8962;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 178056 179441 . + . ID=Thaps8964;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA00];external_name=Thaps8964;logic_name=jgi_thaps3 chr12 ensembl transcript 178056 179441 . + . ID=Thaps8964;Parent=Thaps8964;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 178056 179441 . + 0 ID=Thaps8964;Parent=Thaps8964;rank=1 chr12 . exon 178056 179441 . + . ID=Thaps8964.1;Parent=Thaps8964;constitutive=1;rank=1 chr12 . repeat_region 184873 184908 . ? . description=trf chr12 . repeat_region 187371 187395 . ? . description=dust chr12 . repeat_region 187372 187395 . ? . description=trf chr12 . repeat_region 187937 187995 . ? . description=dust chr12 . repeat_region 188545 188579 . ? . description=dust chr12 ensembl protein_coding_gene 181753 183286 . + . ID=Thaps16210;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA01];external_name=Thaps16210;logic_name=jgi_thaps3 chr12 ensembl transcript 181753 183286 . + . ID=Thaps16210;Parent=Thaps16210;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 181753 181937 . + 0 ID=Thaps16210;Parent=Thaps16210;rank=1 chr12 . exon 181753 181937 . + . ID=Thaps16210.1;Parent=Thaps16210;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 182415 182699 . + 0 ID=Thaps16210;Parent=Thaps16210;rank=2 chr12 . exon 182415 182699 . + . ID=Thaps16210.2;Parent=Thaps16210;constitutive=1;rank=2 chr12 . CDS 182769 182942 . + 0 ID=Thaps16210;Parent=Thaps16210;rank=3 chr12 . exon 182769 182942 . + . ID=Thaps16210.3;Parent=Thaps16210;constitutive=1;rank=3 chr12 . CDS 183028 183286 . + 0 ID=Thaps16210;Parent=Thaps16210;rank=4 chr12 . exon 183028 183286 . + . ID=Thaps16210.4;Parent=Thaps16210;constitutive=1;ensembl_end_phase=1;rank=4 chr12 ensembl protein_coding_gene 185263 185856 . + . ID=Thaps24428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA02];external_name=Thaps24428;logic_name=jgi_thaps3 chr12 ensembl transcript 185263 185856 . + . ID=Thaps24428;Parent=Thaps24428;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 185263 185856 . + 0 ID=Thaps24428;Parent=Thaps24428;rank=1 chr12 . exon 185263 185856 . + . ID=Thaps24428.1;Parent=Thaps24428;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 186412 187402 . - . ID=Thaps8967;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA03];external_name=Thaps8967;logic_name=jgi_thaps3 chr12 ensembl transcript 186412 187402 . - . ID=Thaps8967;Parent=Thaps8967;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 186412 186905 . - 0 ID=Thaps8967;Parent=Thaps8967;rank=2 chr12 . exon 186412 186905 . - . ID=Thaps8967.2;Parent=Thaps8967;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 187075 187402 . - 0 ID=Thaps8967;Parent=Thaps8967;rank=1 chr12 . exon 187075 187402 . - . ID=Thaps8967.1;Parent=Thaps8967;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 187818 188597 . + . ID=Thaps8968;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA04];external_name=Thaps8968;logic_name=jgi_thaps3 chr12 ensembl transcript 187818 188597 . + . ID=Thaps8968;Parent=Thaps8968;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 187818 188597 . + 0 ID=Thaps8968;Parent=Thaps8968;rank=1 chr12 . exon 187818 188597 . + . ID=Thaps8968.1;Parent=Thaps8968;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 190244 193211 . - . ID=Thaps24429;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA05];external_name=Thaps24429;logic_name=jgi_thaps3 chr12 ensembl transcript 190244 193211 . - . ID=Thaps24429;Parent=Thaps24429;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 190244 190429 . - 0 ID=Thaps24429;Parent=Thaps24429;rank=4 chr12 . exon 190244 190429 . - . ID=Thaps24429.4;Parent=Thaps24429;constitutive=1;rank=4 chr12 . CDS 190523 191129 . - 0 ID=Thaps24429;Parent=Thaps24429;rank=3 chr12 . exon 190523 191129 . - . ID=Thaps24429.3;Parent=Thaps24429;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 191227 191688 . - 0 ID=Thaps24429;Parent=Thaps24429;rank=2 chr12 . exon 191227 191688 . - . ID=Thaps24429.2;Parent=Thaps24429;constitutive=1;rank=2 chr12 . CDS 191767 193211 . - 0 ID=Thaps24429;Parent=Thaps24429;rank=1 chr12 . exon 191767 193211 . - . ID=Thaps24429.1;Parent=Thaps24429;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 196208 197344 . + . ID=Thaps24431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA07];external_name=Thaps24431;logic_name=jgi_thaps3 chr12 ensembl transcript 196208 197344 . + . ID=Thaps24431;Parent=Thaps24431;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 196208 197344 . + 0 ID=Thaps24431;Parent=Thaps24431;rank=1 chr12 . exon 196208 197344 . + . ID=Thaps24431.1;Parent=Thaps24431;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 195186 195500 . + . ID=Thaps36787;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA06];external_name=Thaps36787;logic_name=jgi_thaps3 chr12 ensembl transcript 195186 195500 . + . ID=Thaps36787;Parent=Thaps36787;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 195186 195500 . + 0 ID=Thaps36787;Parent=Thaps36787;rank=1 chr12 . exon 195186 195500 . + . ID=Thaps36787.1;Parent=Thaps36787;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 198078 199274 . - . ID=Thaps8972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA08];external_name=Thaps8972;logic_name=jgi_thaps3 chr12 ensembl transcript 198078 199274 . - . ID=Thaps8972;Parent=Thaps8972;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 198078 199274 . - 0 ID=Thaps8972;Parent=Thaps8972;rank=1 chr12 . exon 198078 199274 . - . ID=Thaps8972.1;Parent=Thaps8972;constitutive=1;rank=1 chr12 . repeat_region 205640 205660 . ? . description=trf chr12 . repeat_region 205640 205660 . ? . description=dust chr12 ensembl protein_coding_gene 200683 202293 . - . ID=Thaps263868;biotype=protein_coding;description=Kinesin motor protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA09];external_name=Thaps263868;logic_name=jgi_thaps3 chr12 ensembl transcript 200683 202293 . - . ID=Thaps263868;Parent=Thaps263868;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 200683 201019 . - 0 ID=Thaps263868;Parent=Thaps263868;rank=4 chr12 . exon 200683 201019 . - . ID=Thaps263868.4;Parent=Thaps263868;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 201122 201451 . - 0 ID=Thaps263868;Parent=Thaps263868;rank=3 chr12 . exon 201122 201451 . - . ID=Thaps263868.3;Parent=Thaps263868;constitutive=1;rank=3 chr12 . CDS 201527 201639 . - 0 ID=Thaps263868;Parent=Thaps263868;rank=2 chr12 . exon 201527 201639 . - . ID=Thaps263868.2;Parent=Thaps263868;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 201736 202293 . - 0 ID=Thaps263868;Parent=Thaps263868;rank=1 chr12 . exon 201736 202293 . - . ID=Thaps263868.1;Parent=Thaps263868;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 207463 211744 . - . ID=Thaps36837;biotype=protein_coding;description=ABC transporter multi-drug efflux transporter-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA11];external_name=Thaps36837;logic_name=jgi_thaps3 chr12 ensembl transcript 207463 211744 . - . ID=Thaps36837;Parent=Thaps36837;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 207463 207693 . - 0 ID=Thaps36837;Parent=Thaps36837;rank=6 chr12 . exon 207463 207693 . - . ID=Thaps36837.6;Parent=Thaps36837;constitutive=1;rank=6 chr12 . CDS 207764 207867 . - 0 ID=Thaps36837;Parent=Thaps36837;rank=5 chr12 . exon 207764 207867 . - . ID=Thaps36837.5;Parent=Thaps36837;constitutive=1;ensembl_end_phase=2;rank=5 chr12 . CDS 207951 209933 . - 0 ID=Thaps36837;Parent=Thaps36837;rank=4 chr12 . exon 207951 209933 . - . ID=Thaps36837.4;Parent=Thaps36837;constitutive=1;rank=4 chr12 . CDS 210026 210230 . - 0 ID=Thaps36837;Parent=Thaps36837;rank=3 chr12 . CDS 210314 210449 . - 0 ID=Thaps36837;Parent=Thaps36837;rank=2 chr12 . CDS 210525 211744 . - 0 ID=Thaps36837;Parent=Thaps36837;rank=1 chr12 ensembl protein_coding_gene 203893 207243 . + . ID=Thaps8974;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA10];external_name=Thaps8974;logic_name=jgi_thaps3 chr12 ensembl transcript 203893 207243 . + . ID=Thaps8974;Parent=Thaps8974;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 203893 207243 . + 0 ID=Thaps8974;Parent=Thaps8974;rank=1 chr12 . exon 203893 207243 . + . ID=Thaps8974.1;Parent=Thaps8974;constitutive=1;rank=1 chr12 . exon 210026 210230 . - . ID=Thaps36837.3;Parent=Thaps36837;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . exon 210314 210449 . - . ID=Thaps36837.2;Parent=Thaps36837;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 210525 211744 . - . ID=Thaps36837.1;Parent=Thaps36837;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . biological_region 220892 220893 0.999 + . logic_name=eponine chr12 . repeat_region 221227 221246 . ? . description=trf chr12 . repeat_region 221227 221246 . ? . description=dust chr12 . repeat_region 226222 226270 . ? . description=trf chr12 . repeat_region 227848 227855 . ? . description=dust chr12 ensembl protein_coding_gene 221399 224753 . + . ID=Thaps24434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA12];external_name=Thaps24434;logic_name=jgi_thaps3 chr12 ensembl transcript 221399 224753 . + . ID=Thaps24434;Parent=Thaps24434;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 221399 223994 . + 0 ID=Thaps24434;Parent=Thaps24434;rank=1 chr12 . exon 221399 223994 . + . ID=Thaps24434.1;Parent=Thaps24434;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 224080 224753 . + 0 ID=Thaps24434;Parent=Thaps24434;rank=2 chr12 . exon 224080 224753 . + . ID=Thaps24434.2;Parent=Thaps24434;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 224921 226520 . - . ID=Thaps8978;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA13];external_name=Thaps8978;logic_name=jgi_thaps3 chr12 ensembl transcript 224921 226520 . - . ID=Thaps8978;Parent=Thaps8978;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 224921 225198 . - 0 ID=Thaps8978;Parent=Thaps8978;rank=2 chr12 . exon 224921 225198 . - . ID=Thaps8978.2;Parent=Thaps8978;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 225503 226520 . - 0 ID=Thaps8978;Parent=Thaps8978;rank=1 chr12 . exon 225503 226520 . - . ID=Thaps8978.1;Parent=Thaps8978;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 227278 232313 . + . ID=Thaps8979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA14];external_name=Thaps8979;logic_name=jgi_thaps3 chr12 ensembl transcript 227278 232313 . + . ID=Thaps8979;Parent=Thaps8979;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 227278 230075 . + 0 ID=Thaps8979;Parent=Thaps8979;rank=1 chr12 . exon 227278 230075 . + . ID=Thaps8979.1;Parent=Thaps8979;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 230155 231223 . + 0 ID=Thaps8979;Parent=Thaps8979;rank=2 chr12 . CDS 231310 231835 . + 0 ID=Thaps8979;Parent=Thaps8979;rank=3 chr12 . CDS 231925 232313 . + 0 ID=Thaps8979;Parent=Thaps8979;rank=4 chr12 . repeat_region 235190 235229 . - . description=TE2c_TP chr12 ensembl protein_coding_gene 237412 239626 . + . ID=Thaps24435;biotype=protein_coding;description=Sodium phosphate cotransporter%2C Na/Pi cotransport system protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA16];external_name=Thaps24435;logic_name=jgi_thaps3 chr12 ensembl transcript 237412 239626 . + . ID=Thaps24435;Parent=Thaps24435;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 237412 237511 . + 0 ID=Thaps24435;Parent=Thaps24435;rank=1 chr12 . exon 237412 237511 . + . ID=Thaps24435.1;Parent=Thaps24435;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 237624 237973 . + 0 ID=Thaps24435;Parent=Thaps24435;rank=2 chr12 . exon 237624 237973 . + . ID=Thaps24435.2;Parent=Thaps24435;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 238075 238531 . + 0 ID=Thaps24435;Parent=Thaps24435;rank=3 chr12 . exon 238075 238531 . + . ID=Thaps24435.3;Parent=Thaps24435;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 238633 238922 . + 0 ID=Thaps24435;Parent=Thaps24435;rank=4 chr12 . exon 238633 238922 . + . ID=Thaps24435.4;Parent=Thaps24435;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 239006 239626 . + 0 ID=Thaps24435;Parent=Thaps24435;rank=5 chr12 . exon 239006 239626 . + . ID=Thaps24435.5;Parent=Thaps24435;constitutive=1;rank=5 chr12 . exon 230155 231223 . + . ID=Thaps8979.2;Parent=Thaps8979;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 231310 231835 . + . ID=Thaps8979.3;Parent=Thaps8979;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . exon 231925 232313 . + . ID=Thaps8979.4;Parent=Thaps8979;constitutive=1;ensembl_end_phase=2;rank=4 chr12 ensembl protein_coding_gene 232748 234704 . - . ID=Thaps8980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA15];external_name=Thaps8980;logic_name=jgi_thaps3 chr12 ensembl transcript 232748 234704 . - . ID=Thaps8980;Parent=Thaps8980;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 232748 232834 . - 0 ID=Thaps8980;Parent=Thaps8980;rank=2 chr12 . exon 232748 232834 . - . ID=Thaps8980.2;Parent=Thaps8980;constitutive=1;rank=2 chr12 . CDS 232935 234704 . - 0 ID=Thaps8980;Parent=Thaps8980;rank=1 chr12 . exon 232935 234704 . - . ID=Thaps8980.1;Parent=Thaps8980;constitutive=1;rank=1 chr12 . repeat_region 240513 240552 . ? . description=dust chr12 . repeat_region 240518 240552 . ? . description=trf chr12 ensembl protein_coding_gene 243464 245326 . - . ID=Thaps24437;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA18];external_name=Thaps24437;logic_name=jgi_thaps3 chr12 ensembl transcript 243464 245326 . - . ID=Thaps24437;Parent=Thaps24437;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 243464 245326 . - 0 ID=Thaps24437;Parent=Thaps24437;rank=1 chr12 . exon 243464 245326 . - . ID=Thaps24437.1;Parent=Thaps24437;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 246298 248009 . + . ID=Thaps263872;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA19];external_name=Thaps263872;logic_name=jgi_thaps3 chr12 ensembl transcript 246298 248009 . + . ID=Thaps263872;Parent=Thaps263872;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 246298 246358 . + 0 ID=Thaps263872;Parent=Thaps263872;rank=1 chr12 . exon 246298 246358 . + . ID=Thaps263872.1;Parent=Thaps263872;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 246422 246585 . + 0 ID=Thaps263872;Parent=Thaps263872;rank=2 chr12 . exon 246422 246585 . + . ID=Thaps263872.2;Parent=Thaps263872;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 246643 247786 . + 0 ID=Thaps263872;Parent=Thaps263872;rank=3 chr12 . exon 246643 247786 . + . ID=Thaps263872.3;Parent=Thaps263872;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 247820 247836 . + 0 ID=Thaps263872;Parent=Thaps263872;rank=4 chr12 . exon 247820 247836 . + . ID=Thaps263872.4;Parent=Thaps263872;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 247912 248009 . + 0 ID=Thaps263872;Parent=Thaps263872;rank=5 chr12 . exon 247912 248009 . + . ID=Thaps263872.5;Parent=Thaps263872;constitutive=1;ensembl_end_phase=2;rank=5 chr12 ensembl protein_coding_gene 248134 249155 . - . ID=Thaps263873;biotype=protein_coding;description=Mitochondrial carrier protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA20];external_name=Thaps263873;logic_name=jgi_thaps3 chr12 ensembl transcript 248134 249155 . - . ID=Thaps263873;Parent=Thaps263873;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 248134 248604 . - 0 ID=Thaps263873;Parent=Thaps263873;rank=2 chr12 . exon 248134 248604 . - . ID=Thaps263873.2;Parent=Thaps263873;constitutive=1;rank=2 chr12 . CDS 248688 249155 . - 0 ID=Thaps263873;Parent=Thaps263873;rank=1 chr12 . exon 248688 249155 . - . ID=Thaps263873.1;Parent=Thaps263873;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 239916 243365 . + . ID=Thaps8982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA17];external_name=Thaps8982;logic_name=jgi_thaps3 chr12 ensembl transcript 239916 243365 . + . ID=Thaps8982;Parent=Thaps8982;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 239916 239952 . + 0 ID=Thaps8982;Parent=Thaps8982;rank=1 chr12 . exon 239916 239952 . + . ID=Thaps8982.1;Parent=Thaps8982;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 240015 240436 . + 0 ID=Thaps8982;Parent=Thaps8982;rank=2 chr12 . exon 240015 240436 . + . ID=Thaps8982.2;Parent=Thaps8982;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 240609 241338 . + 0 ID=Thaps8982;Parent=Thaps8982;rank=3 chr12 . exon 240609 241338 . + . ID=Thaps8982.3;Parent=Thaps8982;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 241422 241852 . + 0 ID=Thaps8982;Parent=Thaps8982;rank=4 chr12 . exon 241422 241852 . + . ID=Thaps8982.4;Parent=Thaps8982;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 241934 242633 . + 0 ID=Thaps8982;Parent=Thaps8982;rank=5 chr12 . exon 241934 242633 . + . ID=Thaps8982.5;Parent=Thaps8982;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . CDS 242775 242978 . + 0 ID=Thaps8982;Parent=Thaps8982;rank=6 chr12 . exon 242775 242978 . + . ID=Thaps8982.6;Parent=Thaps8982;constitutive=1;rank=6 chr12 . CDS 243034 243365 . + 0 ID=Thaps8982;Parent=Thaps8982;rank=7 chr12 . exon 243034 243365 . + . ID=Thaps8982.7;Parent=Thaps8982;constitutive=1;ensembl_end_phase=2;rank=7 chr12 ensembl protein_coding_gene 256104 258085 . + . ID=Thaps36788;biotype=protein_coding;description=Myo-inositol-1-phosphate synthase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA22];external_name=Thaps36788;logic_name=jgi_thaps3 chr12 ensembl transcript 256104 258085 . + . ID=Thaps36788;Parent=Thaps36788;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 256104 256192 . + 0 ID=Thaps36788;Parent=Thaps36788;rank=1 chr12 . exon 256104 256192 . + . ID=Thaps36788.1;Parent=Thaps36788;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 256531 256656 . + 0 ID=Thaps36788;Parent=Thaps36788;rank=2 chr12 . exon 256531 256656 . + . ID=Thaps36788.2;Parent=Thaps36788;constitutive=1;rank=2 chr12 . CDS 256777 258085 . + 0 ID=Thaps36788;Parent=Thaps36788;rank=3 chr12 . exon 256777 258085 . + . ID=Thaps36788.3;Parent=Thaps36788;constitutive=1;ensembl_end_phase=1;rank=3 chr12 ensembl protein_coding_gene 252437 253456 . + . ID=Thaps8986;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA21];external_name=Thaps8986;logic_name=jgi_thaps3 chr12 ensembl transcript 252437 253456 . + . ID=Thaps8986;Parent=Thaps8986;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 252437 252883 . + 0 ID=Thaps8986;Parent=Thaps8986;rank=1 chr12 . exon 252437 252883 . + . ID=Thaps8986.1;Parent=Thaps8986;constitutive=1;rank=1 chr12 . CDS 252959 253456 . + 0 ID=Thaps8986;Parent=Thaps8986;rank=2 chr12 . exon 252959 253456 . + . ID=Thaps8986.2;Parent=Thaps8986;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 259311 259689 . + . ID=Thaps8988;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA23];external_name=Thaps8988;logic_name=jgi_thaps3 chr12 ensembl transcript 259311 259689 . + . ID=Thaps8988;Parent=Thaps8988;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 259311 259532 . + 0 ID=Thaps8988;Parent=Thaps8988;rank=1 chr12 . exon 259311 259532 . + . ID=Thaps8988.1;Parent=Thaps8988;constitutive=1;rank=1 chr12 . CDS 259579 259689 . + 0 ID=Thaps8988;Parent=Thaps8988;rank=2 chr12 . exon 259579 259689 . + . ID=Thaps8988.2;Parent=Thaps8988;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 263973 265277 . - . ID=Thaps24439;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA26];external_name=Thaps24439;logic_name=jgi_thaps3 chr12 ensembl transcript 263973 265277 . - . ID=Thaps24439;Parent=Thaps24439;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 263973 265277 . - 0 ID=Thaps24439;Parent=Thaps24439;rank=1 chr12 . exon 263973 265277 . - . ID=Thaps24439.1;Parent=Thaps24439;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 260738 261289 . - . ID=Thaps36775;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8CA24];external_name=Thaps36775;logic_name=jgi_thaps3 chr12 ensembl transcript 260738 261289 . - . ID=Thaps36775;Parent=Thaps36775;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 260738 261289 . - 0 ID=Thaps36775;Parent=Thaps36775;rank=1 chr12 . exon 260738 261289 . - . ID=Thaps36775.1;Parent=Thaps36775;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 268812 269707 . + . ID=Thaps36835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA28];external_name=Thaps36835;logic_name=jgi_thaps3 chr12 ensembl transcript 268812 269707 . + . ID=Thaps36835;Parent=Thaps36835;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 268812 269358 . + 0 ID=Thaps36835;Parent=Thaps36835;rank=1 chr12 . exon 268812 269358 . + . ID=Thaps36835.1;Parent=Thaps36835;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 269442 269707 . + 0 ID=Thaps36835;Parent=Thaps36835;rank=2 chr12 . exon 269442 269707 . + . ID=Thaps36835.2;Parent=Thaps36835;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 261399 263879 . + . ID=Thaps8990;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA25];external_name=Thaps8990;logic_name=jgi_thaps3 chr12 ensembl transcript 261399 263879 . + . ID=Thaps8990;Parent=Thaps8990;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 261399 263879 . + 0 ID=Thaps8990;Parent=Thaps8990;rank=1 chr12 . exon 261399 263879 . + . ID=Thaps8990.1;Parent=Thaps8990;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 266079 267275 . - . ID=Thaps8992;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA27];external_name=Thaps8992;logic_name=jgi_thaps3 chr12 ensembl transcript 266079 267275 . - . ID=Thaps8992;Parent=Thaps8992;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 266079 267275 . - 0 ID=Thaps8992;Parent=Thaps8992;rank=1 chr12 . exon 266079 267275 . - . ID=Thaps8992.1;Parent=Thaps8992;constitutive=1;rank=1 chr12 . repeat_region 275072 275095 . ? . description=trf chr12 . repeat_region 275072 275095 . ? . description=dust chr12 ensembl protein_coding_gene 275282 276845 . - . ID=Thaps24441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA31];external_name=Thaps24441;logic_name=jgi_thaps3 chr12 ensembl transcript 275282 276845 . - . ID=Thaps24441;Parent=Thaps24441;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 275282 276625 . - 0 ID=Thaps24441;Parent=Thaps24441;rank=2 chr12 . exon 275282 276625 . - . ID=Thaps24441.2;Parent=Thaps24441;constitutive=1;rank=2 chr12 . CDS 276717 276845 . - 0 ID=Thaps24441;Parent=Thaps24441;rank=1 chr12 . exon 276717 276845 . - . ID=Thaps24441.1;Parent=Thaps24441;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 271639 271995 . + . ID=Thaps8994;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA29];external_name=Thaps8994;logic_name=jgi_thaps3 chr12 ensembl transcript 271639 271995 . + . ID=Thaps8994;Parent=Thaps8994;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 271639 271995 . + 0 ID=Thaps8994;Parent=Thaps8994;rank=1 chr12 . exon 271639 271995 . + . ID=Thaps8994.1;Parent=Thaps8994;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 272629 274656 . + . ID=Thaps8995;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA30];external_name=Thaps8995;logic_name=jgi_thaps3 chr12 ensembl transcript 272629 274656 . + . ID=Thaps8995;Parent=Thaps8995;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 272629 274656 . + 0 ID=Thaps8995;Parent=Thaps8995;rank=1 chr12 . exon 272629 274656 . + . ID=Thaps8995.1;Parent=Thaps8995;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 278202 280259 . + . ID=Thaps8997;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA32];external_name=Thaps8997;logic_name=jgi_thaps3 chr12 ensembl transcript 278202 280259 . + . ID=Thaps8997;Parent=Thaps8997;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 278202 279590 . + 0 ID=Thaps8997;Parent=Thaps8997;rank=1 chr12 . exon 278202 279590 . + . ID=Thaps8997.1;Parent=Thaps8997;constitutive=1;rank=1 chr12 . CDS 279663 280259 . + 0 ID=Thaps8997;Parent=Thaps8997;rank=2 chr12 ensembl protein_coding_gene 287973 289625 . + . ID=Thaps24443;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA36];external_name=Thaps24443;logic_name=jgi_thaps3 chr12 ensembl transcript 287973 289625 . + . ID=Thaps24443;Parent=Thaps24443;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 287973 289625 . + 0 ID=Thaps24443;Parent=Thaps24443;rank=1 chr12 . exon 287973 289625 . + . ID=Thaps24443.1;Parent=Thaps24443;constitutive=1;rank=1 chr12 . exon 279663 280259 . + . ID=Thaps8997.2;Parent=Thaps8997;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 282003 282863 . + . ID=Thaps8998;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA33];external_name=Thaps8998;logic_name=jgi_thaps3 chr12 ensembl transcript 282003 282863 . + . ID=Thaps8998;Parent=Thaps8998;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 282003 282863 . + 0 ID=Thaps8998;Parent=Thaps8998;rank=1 chr12 . exon 282003 282863 . + . ID=Thaps8998.1;Parent=Thaps8998;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 282973 284151 . - . ID=Thaps8999;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA34];external_name=Thaps8999;logic_name=jgi_thaps3 chr12 ensembl transcript 282973 284151 . - . ID=Thaps8999;Parent=Thaps8999;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 282973 284151 . - 0 ID=Thaps8999;Parent=Thaps8999;rank=1 chr12 . exon 282973 284151 . - . ID=Thaps8999.1;Parent=Thaps8999;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 284443 285408 . + . ID=Thaps9000;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA35];external_name=Thaps9000;logic_name=jgi_thaps3 chr12 ensembl transcript 284443 285408 . + . ID=Thaps9000;Parent=Thaps9000;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 284443 285408 . + 0 ID=Thaps9000;Parent=Thaps9000;rank=1 chr12 . exon 284443 285408 . + . ID=Thaps9000.1;Parent=Thaps9000;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 292388 300101 . - . ID=Thaps24445;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA39];external_name=Thaps24445;logic_name=jgi_thaps3 chr12 ensembl transcript 292388 300101 . - . ID=Thaps24445;Parent=Thaps24445;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 292388 294355 . - 0 ID=Thaps24445;Parent=Thaps24445;rank=7 chr12 . exon 292388 294355 . - . ID=Thaps24445.7;Parent=Thaps24445;constitutive=1;rank=7 chr12 . CDS 294442 294798 . - 0 ID=Thaps24445;Parent=Thaps24445;rank=6 chr12 . exon 294442 294798 . - . ID=Thaps24445.6;Parent=Thaps24445;constitutive=1;rank=6 chr12 . CDS 294838 295293 . - 0 ID=Thaps24445;Parent=Thaps24445;rank=5 chr12 . exon 294838 295293 . - . ID=Thaps24445.5;Parent=Thaps24445;constitutive=1;rank=5 chr12 . CDS 295372 296262 . - 0 ID=Thaps24445;Parent=Thaps24445;rank=4 chr12 . exon 295372 296262 . - . ID=Thaps24445.4;Parent=Thaps24445;constitutive=1;rank=4 chr12 . CDS 296338 298131 . - 0 ID=Thaps24445;Parent=Thaps24445;rank=3 chr12 . exon 296338 298131 . - . ID=Thaps24445.3;Parent=Thaps24445;constitutive=1;rank=3 chr12 . CDS 298221 299497 . - 0 ID=Thaps24445;Parent=Thaps24445;rank=2 chr12 . exon 298221 299497 . - . ID=Thaps24445.2;Parent=Thaps24445;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 299615 300101 . - 0 ID=Thaps24445;Parent=Thaps24445;rank=1 chr12 ensembl protein_coding_gene 289720 290819 . - . ID=Thaps9002;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA37];external_name=Thaps9002;logic_name=jgi_thaps3 chr12 ensembl transcript 289720 290819 . - . ID=Thaps9002;Parent=Thaps9002;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 289720 290226 . - 0 ID=Thaps9002;Parent=Thaps9002;rank=2 chr12 . exon 289720 290226 . - . ID=Thaps9002.2;Parent=Thaps9002;constitutive=1;rank=2 chr12 . CDS 290340 290819 . - 0 ID=Thaps9002;Parent=Thaps9002;rank=1 chr12 . exon 290340 290819 . - . ID=Thaps9002.1;Parent=Thaps9002;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 291642 292130 . + . ID=Thaps9003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA38];external_name=Thaps9003;logic_name=jgi_thaps3 chr12 ensembl transcript 291642 292130 . + . ID=Thaps9003;Parent=Thaps9003;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 291642 292130 . + 0 ID=Thaps9003;Parent=Thaps9003;rank=1 chr12 . exon 291642 292130 . + . ID=Thaps9003.1;Parent=Thaps9003;constitutive=1;rank=1 chr12 . repeat_region 300633 300661 . ? . description=trf chr12 . repeat_region 300633 300661 . ? . description=dust chr12 . repeat_region 302625 302698 . ? . description=trf chr12 . repeat_region 303337 303347 . ? . description=dust chr12 . repeat_region 307811 307830 . ? . description=trf chr12 . repeat_region 307811 307830 . ? . description=dust chr12 ensembl protein_coding_gene 300801 301507 . + . ID=Thaps18388;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA40];external_name=Thaps18388;logic_name=jgi_thaps3 chr12 ensembl transcript 300801 301507 . + . ID=Thaps18388;Parent=Thaps18388;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 300801 300938 . + 0 ID=Thaps18388;Parent=Thaps18388;rank=1 chr12 . exon 300801 300938 . + . ID=Thaps18388.1;Parent=Thaps18388;constitutive=1;rank=1 chr12 . CDS 301163 301507 . + 0 ID=Thaps18388;Parent=Thaps18388;rank=2 chr12 . exon 301163 301507 . + . ID=Thaps18388.2;Parent=Thaps18388;constitutive=1;rank=2 chr12 . exon 299615 300101 . - . ID=Thaps24445.1;Parent=Thaps24445;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 302118 302980 . - . ID=Thaps9006;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA41];external_name=Thaps9006;logic_name=jgi_thaps3 chr12 ensembl transcript 302118 302980 . - . ID=Thaps9006;Parent=Thaps9006;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 302118 302621 . - 0 ID=Thaps9006;Parent=Thaps9006;rank=2 chr12 . exon 302118 302621 . - . ID=Thaps9006.2;Parent=Thaps9006;constitutive=1;rank=2 chr12 . CDS 302942 302980 . - 0 ID=Thaps9006;Parent=Thaps9006;rank=1 chr12 . exon 302942 302980 . - . ID=Thaps9006.1;Parent=Thaps9006;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 303383 304393 . + . ID=Thaps9007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA42];external_name=Thaps9007;logic_name=jgi_thaps3 chr12 ensembl transcript 303383 304393 . + . ID=Thaps9007;Parent=Thaps9007;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 303383 303583 . + 0 ID=Thaps9007;Parent=Thaps9007;rank=1 chr12 . exon 303383 303583 . + . ID=Thaps9007.1;Parent=Thaps9007;constitutive=1;rank=1 chr12 . CDS 303604 303906 . + 0 ID=Thaps9007;Parent=Thaps9007;rank=2 chr12 . exon 303604 303906 . + . ID=Thaps9007.2;Parent=Thaps9007;constitutive=1;rank=2 chr12 . CDS 304106 304393 . + 0 ID=Thaps9007;Parent=Thaps9007;rank=3 chr12 . exon 304106 304393 . + . ID=Thaps9007.3;Parent=Thaps9007;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 305099 307637 . + . ID=Thaps9008;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA43];external_name=Thaps9008;logic_name=jgi_thaps3 chr12 ensembl transcript 305099 307637 . + . ID=Thaps9008;Parent=Thaps9008;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 305099 305363 . + 0 ID=Thaps9008;Parent=Thaps9008;rank=1 chr12 . exon 305099 305363 . + . ID=Thaps9008.1;Parent=Thaps9008;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 305447 306140 . + 0 ID=Thaps9008;Parent=Thaps9008;rank=2 chr12 . exon 305447 306140 . + . ID=Thaps9008.2;Parent=Thaps9008;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 306199 306200 . + 0 ID=Thaps9008;Parent=Thaps9008;rank=3 chr12 . exon 306199 306200 . + . ID=Thaps9008.3;Parent=Thaps9008;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 306236 307227 . + 0 ID=Thaps9008;Parent=Thaps9008;rank=4 chr12 . exon 306236 307227 . + . ID=Thaps9008.4;Parent=Thaps9008;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 307308 307637 . + 0 ID=Thaps9008;Parent=Thaps9008;rank=5 chr12 . exon 307308 307637 . + . ID=Thaps9008.5;Parent=Thaps9008;constitutive=1;rank=5 chr12 ensembl protein_coding_gene 307917 309071 . - . ID=Thaps9009;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA44];external_name=Thaps9009;logic_name=jgi_thaps3 chr12 ensembl transcript 307917 309071 . - . ID=Thaps9009;Parent=Thaps9009;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 307917 308780 . - 0 ID=Thaps9009;Parent=Thaps9009;rank=2 chr12 . exon 307917 308780 . - . ID=Thaps9009.2;Parent=Thaps9009;constitutive=1;rank=2 chr12 . CDS 308910 309071 . - 0 ID=Thaps9009;Parent=Thaps9009;rank=1 chr12 . exon 308910 309071 . - . ID=Thaps9009.1;Parent=Thaps9009;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 318310 320439 . - . ID=Thaps263878;biotype=protein_coding;description=Acyl-coa oxidase [Source:UniProtKB/TrEMBL%3BAcc:B8CA48];external_name=AOX1_1;logic_name=jgi_thaps3 chr12 ensembl transcript 318310 320439 . - . ID=Thaps263878;Parent=Thaps263878;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 318310 319871 . - 0 ID=Thaps263878;Parent=Thaps263878;rank=3 chr12 . exon 318310 319871 . - . ID=Thaps263878.3;Parent=Thaps263878;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 319890 320142 . - 0 ID=Thaps263878;Parent=Thaps263878;rank=2 chr12 . CDS 320200 320439 . - 0 ID=Thaps263878;Parent=Thaps263878;rank=1 chr12 ensembl protein_coding_gene 311919 313772 . - . ID=Thaps42074;biotype=protein_coding;description=Threonine dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8CA45];external_name=Thaps42074;logic_name=jgi_thaps3 chr12 ensembl transcript 311919 313772 . - . ID=Thaps42074;Parent=Thaps42074;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 311919 312624 . - 0 ID=Thaps42074;Parent=Thaps42074;rank=3 chr12 . exon 311919 312624 . - . ID=Thaps42074.3;Parent=Thaps42074;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 312711 313444 . - 0 ID=Thaps42074;Parent=Thaps42074;rank=2 chr12 . exon 312711 313444 . - . ID=Thaps42074.2;Parent=Thaps42074;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 313674 313772 . - 0 ID=Thaps42074;Parent=Thaps42074;rank=1 chr12 . exon 313674 313772 . - . ID=Thaps42074.1;Parent=Thaps42074;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 314385 316087 . + . ID=Thaps9011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA46];external_name=Thaps9011;logic_name=jgi_thaps3 chr12 ensembl transcript 314385 316087 . + . ID=Thaps9011;Parent=Thaps9011;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 314385 314813 . + 0 ID=Thaps9011;Parent=Thaps9011;rank=1 chr12 . exon 314385 314813 . + . ID=Thaps9011.1;Parent=Thaps9011;constitutive=1;rank=1 chr12 . CDS 314925 315694 . + 0 ID=Thaps9011;Parent=Thaps9011;rank=2 chr12 . exon 314925 315694 . + . ID=Thaps9011.2;Parent=Thaps9011;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 315871 316087 . + 0 ID=Thaps9011;Parent=Thaps9011;rank=3 chr12 . exon 315871 316087 . + . ID=Thaps9011.3;Parent=Thaps9011;constitutive=1;ensembl_end_phase=1;rank=3 chr12 ensembl protein_coding_gene 316688 317802 . + . ID=Thaps9012;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA47];external_name=Thaps9012;logic_name=jgi_thaps3 chr12 ensembl transcript 316688 317802 . + . ID=Thaps9012;Parent=Thaps9012;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 316688 316841 . + 0 ID=Thaps9012;Parent=Thaps9012;rank=1 chr12 . exon 316688 316841 . + . ID=Thaps9012.1;Parent=Thaps9012;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 316868 317802 . + 0 ID=Thaps9012;Parent=Thaps9012;rank=2 chr12 . exon 316868 317802 . + . ID=Thaps9012.2;Parent=Thaps9012;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . repeat_region 320620 320627 . ? . description=dust chr12 . exon 319890 320142 . - . ID=Thaps263878.2;Parent=Thaps263878;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 320200 320439 . - . ID=Thaps263878.1;Parent=Thaps263878;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 329079 330406 . + . ID=Thaps263879;biotype=protein_coding;description=Origin recognition complex subunit 1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA51];external_name=Thaps263879;logic_name=jgi_thaps3 chr12 ensembl transcript 329079 330406 . + . ID=Thaps263879;Parent=Thaps263879;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 329079 330406 . + 0 ID=Thaps263879;Parent=Thaps263879;rank=1 chr12 . exon 329079 330406 . + . ID=Thaps263879.1;Parent=Thaps263879;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 321128 322093 . + . ID=Thaps9014;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA49];external_name=Thaps9014;logic_name=jgi_thaps3 chr12 ensembl transcript 321128 322093 . + . ID=Thaps9014;Parent=Thaps9014;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 321128 321640 . + 0 ID=Thaps9014;Parent=Thaps9014;rank=1 chr12 . exon 321128 321640 . + . ID=Thaps9014.1;Parent=Thaps9014;constitutive=1;rank=1 chr12 . CDS 321739 321789 . + 0 ID=Thaps9014;Parent=Thaps9014;rank=2 chr12 . exon 321739 321789 . + . ID=Thaps9014.2;Parent=Thaps9014;constitutive=1;rank=2 chr12 . CDS 321872 322093 . + 0 ID=Thaps9014;Parent=Thaps9014;rank=3 chr12 . exon 321872 322093 . + . ID=Thaps9014.3;Parent=Thaps9014;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 322652 324237 . - . ID=Thaps9015;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA50];external_name=Thaps9015;logic_name=jgi_thaps3 chr12 ensembl transcript 322652 324237 . - . ID=Thaps9015;Parent=Thaps9015;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 322652 323179 . - 0 ID=Thaps9015;Parent=Thaps9015;rank=3 chr12 . exon 322652 323179 . - . ID=Thaps9015.3;Parent=Thaps9015;constitutive=1;rank=3 chr12 . CDS 323248 323907 . - 0 ID=Thaps9015;Parent=Thaps9015;rank=2 chr12 . exon 323248 323907 . - . ID=Thaps9015.2;Parent=Thaps9015;constitutive=1;rank=2 chr12 . CDS 324106 324237 . - 0 ID=Thaps9015;Parent=Thaps9015;rank=1 chr12 . exon 324106 324237 . - . ID=Thaps9015.1;Parent=Thaps9015;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 330497 332452 . - . ID=Thaps9017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA52];external_name=Thaps9017;logic_name=jgi_thaps3 chr12 ensembl transcript 330497 332452 . - . ID=Thaps9017;Parent=Thaps9017;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 330497 331901 . - 0 ID=Thaps9017;Parent=Thaps9017;rank=2 chr12 . exon 330497 331901 . - . ID=Thaps9017.2;Parent=Thaps9017;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 332022 332452 . - 0 ID=Thaps9017;Parent=Thaps9017;rank=1 chr12 . exon 332022 332452 . - . ID=Thaps9017.1;Parent=Thaps9017;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 335876 339560 . - . ID=Thaps9018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA53];external_name=Thaps9018;logic_name=jgi_thaps3 chr12 ensembl transcript 335876 339560 . - . ID=Thaps9018;Parent=Thaps9018;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 335876 335965 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=11 chr12 . exon 335876 335965 . - . ID=Thaps9018.11;Parent=Thaps9018;constitutive=1;rank=11 chr12 . CDS 336042 336654 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=10 chr12 . exon 336042 336654 . - . ID=Thaps9018.10;Parent=Thaps9018;constitutive=1;ensembl_end_phase=1;rank=10 chr12 . CDS 336727 336796 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=9 chr12 . exon 336727 336796 . - . ID=Thaps9018.9;Parent=Thaps9018;constitutive=1;ensembl_end_phase=1;rank=9 chr12 . CDS 336865 336893 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=8 chr12 . exon 336865 336893 . - . ID=Thaps9018.8;Parent=Thaps9018;constitutive=1;ensembl_end_phase=2;rank=8 chr12 . CDS 336968 337174 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=7 chr12 . exon 336968 337174 . - . ID=Thaps9018.7;Parent=Thaps9018;constitutive=1;rank=7 chr12 . CDS 337204 337806 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=6 chr12 . exon 337204 337806 . - . ID=Thaps9018.6;Parent=Thaps9018;constitutive=1;rank=6 chr12 . CDS 338243 338303 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=5 chr12 . exon 338243 338303 . - . ID=Thaps9018.5;Parent=Thaps9018;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . CDS 338334 338498 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=4 chr12 . exon 338334 338498 . - . ID=Thaps9018.4;Parent=Thaps9018;constitutive=1;rank=4 chr12 . CDS 338589 339035 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=3 chr12 . exon 338589 339035 . - . ID=Thaps9018.3;Parent=Thaps9018;constitutive=1;rank=3 chr12 . CDS 339126 339354 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=2 chr12 . exon 339126 339354 . - . ID=Thaps9018.2;Parent=Thaps9018;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 339465 339560 . - 0 ID=Thaps9018;Parent=Thaps9018;rank=1 chr12 . exon 339465 339560 . - . ID=Thaps9018.1;Parent=Thaps9018;constitutive=1;rank=1 chr12 . repeat_region 340401 340537 . - . description=Copia9I_TP chr12 . repeat_region 340761 340893 . - . description=Gypsy1LTR_TP chr12 . repeat_region 342756 342768 . ? . description=dust chr12 . biological_region 347755 347755 0.999 - . logic_name=eponine chr12 . repeat_region 347859 347891 . ? . description=dust chr12 ensembl protein_coding_gene 346003 347664 . - . ID=Thaps13572;biotype=protein_coding;description=Methionyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8CA56];external_name=MTS1;logic_name=jgi_thaps3 chr12 ensembl transcript 346003 347664 . - . ID=Thaps13572;Parent=Thaps13572;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 346003 347664 . - 0 ID=Thaps13572;Parent=Thaps13572;rank=1 chr12 . exon 346003 347664 . - . ID=Thaps13572.1;Parent=Thaps13572;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 341258 342674 . - . ID=Thaps24448;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA54];external_name=Thaps24448;logic_name=jgi_thaps3 chr12 ensembl transcript 341258 342674 . - . ID=Thaps24448;Parent=Thaps24448;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 341258 341443 . - 0 ID=Thaps24448;Parent=Thaps24448;rank=3 chr12 . exon 341258 341443 . - . ID=Thaps24448.3;Parent=Thaps24448;constitutive=1;rank=3 chr12 . CDS 341507 341973 . - 0 ID=Thaps24448;Parent=Thaps24448;rank=2 chr12 . exon 341507 341973 . - . ID=Thaps24448.2;Parent=Thaps24448;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 342101 342674 . - 0 ID=Thaps24448;Parent=Thaps24448;rank=1 chr12 . exon 342101 342674 . - . ID=Thaps24448.1;Parent=Thaps24448;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 345308 346026 . - . ID=Thaps263880;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA55];external_name=Thaps263880;logic_name=jgi_thaps3 chr12 ensembl transcript 345308 346026 . - . ID=Thaps263880;Parent=Thaps263880;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 345308 345534 . - 0 ID=Thaps263880;Parent=Thaps263880;rank=3 chr12 . exon 345308 345534 . - . ID=Thaps263880.3;Parent=Thaps263880;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 345631 345834 . - 0 ID=Thaps263880;Parent=Thaps263880;rank=2 chr12 . exon 345631 345834 . - . ID=Thaps263880.2;Parent=Thaps263880;constitutive=1;rank=2 chr12 . CDS 345925 346026 . - 0 ID=Thaps263880;Parent=Thaps263880;rank=1 chr12 . exon 345925 346026 . - . ID=Thaps263880.1;Parent=Thaps263880;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 348673 349665 . + . ID=Thaps9021;biotype=protein_coding;description=Porphobilinogen deaminase [Source:UniProtKB/TrEMBL%3BAcc:B8CA57];external_name=PBGD;logic_name=jgi_thaps3 chr12 ensembl transcript 348673 349665 . + . ID=Thaps9021;Parent=Thaps9021;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 348673 349665 . + 0 ID=Thaps9021;Parent=Thaps9021;rank=1 chr12 . exon 348673 349665 . + . ID=Thaps9021.1;Parent=Thaps9021;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 350218 352159 . + . ID=Thaps24451;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA58];external_name=Thaps24451;logic_name=jgi_thaps3 chr12 ensembl transcript 350218 352159 . + . ID=Thaps24451;Parent=Thaps24451;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 350218 350380 . + 0 ID=Thaps24451;Parent=Thaps24451;rank=1 chr12 . exon 350218 350380 . + . ID=Thaps24451.1;Parent=Thaps24451;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 350592 352159 . + 0 ID=Thaps24451;Parent=Thaps24451;rank=2 chr12 . exon 350592 352159 . + . ID=Thaps24451.2;Parent=Thaps24451;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 357060 359233 . + . ID=Thaps24452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA61];external_name=Thaps24452;logic_name=jgi_thaps3 chr12 ensembl transcript 357060 359233 . + . ID=Thaps24452;Parent=Thaps24452;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 357060 357291 . + 0 ID=Thaps24452;Parent=Thaps24452;rank=1 chr12 . exon 357060 357291 . + . ID=Thaps24452.1;Parent=Thaps24452;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 357480 357646 . + 0 ID=Thaps24452;Parent=Thaps24452;rank=2 chr12 . exon 357480 357646 . + . ID=Thaps24452.2;Parent=Thaps24452;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 357836 359233 . + 0 ID=Thaps24452;Parent=Thaps24452;rank=3 chr12 . exon 357836 359233 . + . ID=Thaps24452.3;Parent=Thaps24452;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 352395 352981 . + . ID=Thaps9023;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA59];external_name=Thaps9023;logic_name=jgi_thaps3 chr12 ensembl transcript 352395 352981 . + . ID=Thaps9023;Parent=Thaps9023;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 352395 352721 . + 0 ID=Thaps9023;Parent=Thaps9023;rank=1 chr12 . exon 352395 352721 . + . ID=Thaps9023.1;Parent=Thaps9023;constitutive=1;rank=1 chr12 . CDS 352844 352981 . + 0 ID=Thaps9023;Parent=Thaps9023;rank=2 chr12 . exon 352844 352981 . + . ID=Thaps9023.2;Parent=Thaps9023;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 353345 356083 . - . ID=Thaps9024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA60];external_name=Thaps9024;logic_name=jgi_thaps3 chr12 ensembl transcript 353345 356083 . - . ID=Thaps9024;Parent=Thaps9024;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 353345 356083 . - 0 ID=Thaps9024;Parent=Thaps9024;rank=1 chr12 . exon 353345 356083 . - . ID=Thaps9024.1;Parent=Thaps9024;constitutive=1;rank=1 chr12 . repeat_region 364917 364953 . ? . description=dust chr12 . repeat_region 364921 364951 . ? . description=trf chr12 ensembl protein_coding_gene 366410 369456 . - . ID=Thaps24454;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA66];external_name=Thaps24454;logic_name=jgi_thaps3 chr12 ensembl transcript 366410 369456 . - . ID=Thaps24454;Parent=Thaps24454;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 366410 366623 . - 0 ID=Thaps24454;Parent=Thaps24454;rank=8 chr12 . exon 366410 366623 . - . ID=Thaps24454.8;Parent=Thaps24454;constitutive=1;ensembl_end_phase=1;rank=8 chr12 . CDS 366711 367007 . - 0 ID=Thaps24454;Parent=Thaps24454;rank=7 chr12 . exon 366711 367007 . - . ID=Thaps24454.7;Parent=Thaps24454;constitutive=1;rank=7 chr12 . CDS 367113 367598 . - 0 ID=Thaps24454;Parent=Thaps24454;rank=6 chr12 . exon 367113 367598 . - . ID=Thaps24454.6;Parent=Thaps24454;constitutive=1;rank=6 chr12 . CDS 367687 367840 . - 0 ID=Thaps24454;Parent=Thaps24454;rank=5 chr12 . exon 367687 367840 . - . ID=Thaps24454.5;Parent=Thaps24454;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . CDS 368017 368075 . - 0 ID=Thaps24454;Parent=Thaps24454;rank=4 chr12 . exon 368017 368075 . - . ID=Thaps24454.4;Parent=Thaps24454;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 368328 368411 . - 0 ID=Thaps24454;Parent=Thaps24454;rank=3 chr12 . exon 368328 368411 . - . ID=Thaps24454.3;Parent=Thaps24454;constitutive=1;rank=3 chr12 . CDS 368726 368953 . - 0 ID=Thaps24454;Parent=Thaps24454;rank=2 chr12 . exon 368726 368953 . - . ID=Thaps24454.2;Parent=Thaps24454;constitutive=1;rank=2 chr12 . CDS 369413 369456 . - 0 ID=Thaps24454;Parent=Thaps24454;rank=1 chr12 . exon 369413 369456 . - . ID=Thaps24454.1;Parent=Thaps24454;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 361021 362645 . + . ID=Thaps263883;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA63];external_name=Thaps263883;logic_name=jgi_thaps3 chr12 ensembl transcript 361021 362645 . + . ID=Thaps263883;Parent=Thaps263883;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 361021 361737 . + 0 ID=Thaps263883;Parent=Thaps263883;rank=1 chr12 . exon 361021 361737 . + . ID=Thaps263883.1;Parent=Thaps263883;constitutive=1;rank=1 chr12 . CDS 361774 361951 . + 0 ID=Thaps263883;Parent=Thaps263883;rank=2 chr12 . exon 361774 361951 . + . ID=Thaps263883.2;Parent=Thaps263883;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 362123 362645 . + 0 ID=Thaps263883;Parent=Thaps263883;rank=3 chr12 . exon 362123 362645 . + . ID=Thaps263883.3;Parent=Thaps263883;constitutive=1;ensembl_end_phase=1;rank=3 chr12 ensembl protein_coding_gene 359509 360390 . - . ID=Thaps9026;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA62];external_name=Thaps9026;logic_name=jgi_thaps3 chr12 ensembl transcript 359509 360390 . - . ID=Thaps9026;Parent=Thaps9026;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 359509 360390 . - 0 ID=Thaps9026;Parent=Thaps9026;rank=1 chr12 . exon 359509 360390 . - . ID=Thaps9026.1;Parent=Thaps9026;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 362742 363965 . - . ID=Thaps9028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA64];external_name=Thaps9028;logic_name=jgi_thaps3 chr12 ensembl transcript 362742 363965 . - . ID=Thaps9028;Parent=Thaps9028;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 362742 363658 . - 0 ID=Thaps9028;Parent=Thaps9028;rank=2 chr12 . exon 362742 363658 . - . ID=Thaps9028.2;Parent=Thaps9028;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 363731 363965 . - 0 ID=Thaps9028;Parent=Thaps9028;rank=1 chr12 . exon 363731 363965 . - . ID=Thaps9028.1;Parent=Thaps9028;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 364549 365129 . + . ID=Thaps9029;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA65];external_name=Thaps9029;logic_name=jgi_thaps3 chr12 ensembl transcript 364549 365129 . + . ID=Thaps9029;Parent=Thaps9029;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 364549 365052 . + 0 ID=Thaps9029;Parent=Thaps9029;rank=1 chr12 . exon 364549 365052 . + . ID=Thaps9029.1;Parent=Thaps9029;constitutive=1;rank=1 chr12 . CDS 365091 365129 . + 0 ID=Thaps9029;Parent=Thaps9029;rank=2 chr12 . exon 365091 365129 . + . ID=Thaps9029.2;Parent=Thaps9029;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 373881 374696 . - . ID=Thaps24455;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA69];external_name=Thaps24455;logic_name=jgi_thaps3 chr12 ensembl transcript 373881 374696 . - . ID=Thaps24455;Parent=Thaps24455;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 373881 374696 . - 0 ID=Thaps24455;Parent=Thaps24455;rank=1 chr12 . exon 373881 374696 . - . ID=Thaps24455.1;Parent=Thaps24455;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 374912 376312 . + . ID=Thaps24456;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA70];external_name=Thaps24456;logic_name=jgi_thaps3 chr12 ensembl transcript 374912 376312 . + . ID=Thaps24456;Parent=Thaps24456;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 374912 376312 . + 0 ID=Thaps24456;Parent=Thaps24456;rank=1 chr12 . exon 374912 376312 . + . ID=Thaps24456.1;Parent=Thaps24456;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 376607 377461 . + . ID=Thaps24457;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA71];external_name=Thaps24457;logic_name=jgi_thaps3 chr12 ensembl transcript 376607 377461 . + . ID=Thaps24457;Parent=Thaps24457;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 376607 377461 . + 0 ID=Thaps24457;Parent=Thaps24457;rank=1 chr12 . exon 376607 377461 . + . ID=Thaps24457.1;Parent=Thaps24457;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 369998 370675 . - . ID=Thaps9031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA67];external_name=Thaps9031;logic_name=jgi_thaps3 chr12 ensembl transcript 369998 370675 . - . ID=Thaps9031;Parent=Thaps9031;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 369998 370675 . - 0 ID=Thaps9031;Parent=Thaps9031;rank=1 chr12 . exon 369998 370675 . - . ID=Thaps9031.1;Parent=Thaps9031;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 371107 372251 . + . ID=Thaps9032;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA68];external_name=Thaps9032;logic_name=jgi_thaps3 chr12 ensembl transcript 371107 372251 . + . ID=Thaps9032;Parent=Thaps9032;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 371107 371496 . + 0 ID=Thaps9032;Parent=Thaps9032;rank=1 chr12 . exon 371107 371496 . + . ID=Thaps9032.1;Parent=Thaps9032;constitutive=1;rank=1 chr12 . CDS 371585 371959 . + 0 ID=Thaps9032;Parent=Thaps9032;rank=2 chr12 . exon 371585 371959 . + . ID=Thaps9032.2;Parent=Thaps9032;constitutive=1;rank=2 chr12 . CDS 372051 372251 . + 0 ID=Thaps9032;Parent=Thaps9032;rank=3 chr12 . exon 372051 372251 . + . ID=Thaps9032.3;Parent=Thaps9032;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 377690 379504 . - . ID=Thaps9036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA72];external_name=Thaps9036;logic_name=jgi_thaps3 chr12 ensembl transcript 377690 379504 . - . ID=Thaps9036;Parent=Thaps9036;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 377690 378028 . - 0 ID=Thaps9036;Parent=Thaps9036;rank=2 chr12 . exon 377690 378028 . - . ID=Thaps9036.2;Parent=Thaps9036;constitutive=1;rank=2 chr12 . CDS 378113 379504 . - 0 ID=Thaps9036;Parent=Thaps9036;rank=1 chr12 . exon 378113 379504 . - . ID=Thaps9036.1;Parent=Thaps9036;constitutive=1;rank=1 chr12 . repeat_region 382764 382811 . ? . description=dust chr12 . repeat_region 383194 383250 . ? . description=trf chr12 . repeat_region 383194 383256 . ? . description=dust chr12 . repeat_region 383203 383257 . ? . description=trf chr12 . repeat_region 383204 383256 . ? . description=trf chr12 . repeat_region 388949 388980 . ? . description=trf chr12 ensembl protein_coding_gene 387153 389062 . + . ID=Thaps24460;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA77];external_name=Thaps24460;logic_name=jgi_thaps3 chr12 ensembl transcript 387153 389062 . + . ID=Thaps24460;Parent=Thaps24460;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 387153 388786 . + 0 ID=Thaps24460;Parent=Thaps24460;rank=1 chr12 . exon 387153 388786 . + . ID=Thaps24460.1;Parent=Thaps24460;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 388876 389062 . + 0 ID=Thaps24460;Parent=Thaps24460;rank=2 chr12 . exon 388876 389062 . + . ID=Thaps24460.2;Parent=Thaps24460;constitutive=1;ensembl_end_phase=1;rank=2 chr12 ensembl protein_coding_gene 384806 386251 . - . ID=Thaps36858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA76];external_name=Thaps36858;logic_name=jgi_thaps3 chr12 ensembl transcript 384806 386251 . - . ID=Thaps36858;Parent=Thaps36858;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 384806 385198 . - 0 ID=Thaps36858;Parent=Thaps36858;rank=3 chr12 . exon 384806 385198 . - . ID=Thaps36858.3;Parent=Thaps36858;constitutive=1;rank=3 chr12 . CDS 385244 385513 . - 0 ID=Thaps36858;Parent=Thaps36858;rank=2 chr12 . exon 385244 385513 . - . ID=Thaps36858.2;Parent=Thaps36858;constitutive=1;rank=2 chr12 . CDS 385577 386251 . - 0 ID=Thaps36858;Parent=Thaps36858;rank=1 chr12 . exon 385577 386251 . - . ID=Thaps36858.1;Parent=Thaps36858;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 381379 381969 . - . ID=Thaps36979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA74];external_name=Thaps36979;logic_name=jgi_thaps3 chr12 ensembl transcript 381379 381969 . - . ID=Thaps36979;Parent=Thaps36979;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 381379 381969 . - 0 ID=Thaps36979;Parent=Thaps36979;rank=1 chr12 . exon 381379 381969 . - . ID=Thaps36979.1;Parent=Thaps36979;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 379826 381154 . + . ID=Thaps9037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA73];external_name=Thaps9037;logic_name=jgi_thaps3 chr12 ensembl transcript 379826 381154 . + . ID=Thaps9037;Parent=Thaps9037;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 379826 380107 . + 0 ID=Thaps9037;Parent=Thaps9037;rank=1 chr12 . exon 379826 380107 . + . ID=Thaps9037.1;Parent=Thaps9037;constitutive=1;rank=1 chr12 . CDS 380294 381154 . + 0 ID=Thaps9037;Parent=Thaps9037;rank=2 chr12 . exon 380294 381154 . + . ID=Thaps9037.2;Parent=Thaps9037;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 382821 384794 . + . ID=Thaps9040;biotype=protein_coding;description=Histone acetyltransferase gcn5-type hat [Source:UniProtKB/TrEMBL%3BAcc:B8CA75];external_name=Thaps9040;logic_name=jgi_thaps3 chr12 ensembl transcript 382821 384794 . + . ID=Thaps9040;Parent=Thaps9040;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 382821 383113 . + 0 ID=Thaps9040;Parent=Thaps9040;rank=1 chr12 . exon 382821 383113 . + . ID=Thaps9040.1;Parent=Thaps9040;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 383259 384286 . + 0 ID=Thaps9040;Parent=Thaps9040;rank=2 chr12 . exon 383259 384286 . + . ID=Thaps9040.2;Parent=Thaps9040;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 384379 384454 . + 0 ID=Thaps9040;Parent=Thaps9040;rank=3 chr12 . exon 384379 384454 . + . ID=Thaps9040.3;Parent=Thaps9040;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 384533 384794 . + 0 ID=Thaps9040;Parent=Thaps9040;rank=4 chr12 . exon 384533 384794 . + . ID=Thaps9040.4;Parent=Thaps9040;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . repeat_region 406636 406690 . ? . description=dust chr12 . repeat_region 406663 406690 . ? . description=trf chr12 . repeat_region 409063 409072 . ? . description=dust chr12 ensembl protein_coding_gene 405286 406608 . - . ID=Thaps29705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA80];external_name=Thaps29705;logic_name=jgi_thaps3 chr12 ensembl transcript 405286 406608 . - . ID=Thaps29705;Parent=Thaps29705;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 405286 405363 . - 0 ID=Thaps29705;Parent=Thaps29705;rank=2 chr12 . exon 405286 405363 . - . ID=Thaps29705.2;Parent=Thaps29705;constitutive=1;rank=2 chr12 . CDS 405460 406608 . - 0 ID=Thaps29705;Parent=Thaps29705;rank=1 chr12 . exon 405460 406608 . - . ID=Thaps29705.1;Parent=Thaps29705;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 400824 401786 . + . ID=Thaps36798;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA78];external_name=Thaps36798;logic_name=jgi_thaps3 chr12 ensembl transcript 400824 401786 . + . ID=Thaps36798;Parent=Thaps36798;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 400824 400922 . + 0 ID=Thaps36798;Parent=Thaps36798;rank=1 chr12 . exon 400824 400922 . + . ID=Thaps36798.1;Parent=Thaps36798;constitutive=1;rank=1 chr12 . CDS 401139 401786 . + 0 ID=Thaps36798;Parent=Thaps36798;rank=2 chr12 . exon 401139 401786 . + . ID=Thaps36798.2;Parent=Thaps36798;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 402798 404745 . - . ID=Thaps9045;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA79];external_name=NTT2;logic_name=jgi_thaps3 chr12 ensembl transcript 402798 404745 . - . ID=Thaps9045;Parent=Thaps9045;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 402798 403408 . - 0 ID=Thaps9045;Parent=Thaps9045;rank=3 chr12 . exon 402798 403408 . - . ID=Thaps9045.3;Parent=Thaps9045;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 403487 404183 . - 0 ID=Thaps9045;Parent=Thaps9045;rank=2 chr12 . exon 403487 404183 . - . ID=Thaps9045.2;Parent=Thaps9045;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 404290 404745 . - 0 ID=Thaps9045;Parent=Thaps9045;rank=1 chr12 . exon 404290 404745 . - . ID=Thaps9045.1;Parent=Thaps9045;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 409099 410103 . + . ID=Thaps9047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA81];external_name=Thaps9047;logic_name=jgi_thaps3 chr12 ensembl transcript 409099 410103 . + . ID=Thaps9047;Parent=Thaps9047;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 409099 410103 . + 0 ID=Thaps9047;Parent=Thaps9047;rank=1 chr12 . exon 409099 410103 . + . ID=Thaps9047.1;Parent=Thaps9047;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 413415 415712 . + . ID=Thaps24464;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA84];external_name=Thaps24464;logic_name=jgi_thaps3 chr12 ensembl transcript 413415 415712 . + . ID=Thaps24464;Parent=Thaps24464;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 413415 415712 . + 0 ID=Thaps24464;Parent=Thaps24464;rank=1 chr12 . exon 413415 415712 . + . ID=Thaps24464.1;Parent=Thaps24464;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 410543 411754 . + . ID=Thaps9048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA82];external_name=Thaps9048;logic_name=jgi_thaps3 chr12 ensembl transcript 410543 411754 . + . ID=Thaps9048;Parent=Thaps9048;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 410543 410673 . + 0 ID=Thaps9048;Parent=Thaps9048;rank=1 chr12 . exon 410543 410673 . + . ID=Thaps9048.1;Parent=Thaps9048;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 410926 411572 . + 0 ID=Thaps9048;Parent=Thaps9048;rank=2 chr12 . exon 410926 411572 . + . ID=Thaps9048.2;Parent=Thaps9048;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 411612 411754 . + 0 ID=Thaps9048;Parent=Thaps9048;rank=3 chr12 . exon 411612 411754 . + . ID=Thaps9048.3;Parent=Thaps9048;constitutive=1;ensembl_end_phase=2;rank=3 chr12 ensembl protein_coding_gene 412165 412697 . - . ID=Thaps9049;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA83];external_name=Thaps9049;logic_name=jgi_thaps3 chr12 ensembl transcript 412165 412697 . - . ID=Thaps9049;Parent=Thaps9049;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 412165 412534 . - 0 ID=Thaps9049;Parent=Thaps9049;rank=2 chr12 . exon 412165 412534 . - . ID=Thaps9049.2;Parent=Thaps9049;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 412639 412697 . - 0 ID=Thaps9049;Parent=Thaps9049;rank=1 chr12 . exon 412639 412697 . - . ID=Thaps9049.1;Parent=Thaps9049;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 416027 417548 . - . ID=Thaps9051;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA85];external_name=Thaps9051;logic_name=jgi_thaps3 chr12 ensembl transcript 416027 417548 . - . ID=Thaps9051;Parent=Thaps9051;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 416027 417193 . - 0 ID=Thaps9051;Parent=Thaps9051;rank=2 chr12 . exon 416027 417193 . - . ID=Thaps9051.2;Parent=Thaps9051;constitutive=1;rank=2 chr12 . CDS 417429 417548 . - 0 ID=Thaps9051;Parent=Thaps9051;rank=1 chr12 . exon 417429 417548 . - . ID=Thaps9051.1;Parent=Thaps9051;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 418420 419320 . + . ID=Thaps9052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA86];external_name=Thaps9052;logic_name=jgi_thaps3 chr12 ensembl transcript 418420 419320 . + . ID=Thaps9052;Parent=Thaps9052;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 418420 418626 . + 0 ID=Thaps9052;Parent=Thaps9052;rank=1 chr12 . exon 418420 418626 . + . ID=Thaps9052.1;Parent=Thaps9052;constitutive=1;rank=1 chr12 . CDS 418776 418985 . + 0 ID=Thaps9052;Parent=Thaps9052;rank=2 chr12 . exon 418776 418985 . + . ID=Thaps9052.2;Parent=Thaps9052;constitutive=1;rank=2 chr12 . CDS 419153 419320 . + 0 ID=Thaps9052;Parent=Thaps9052;rank=3 chr12 . exon 419153 419320 . + . ID=Thaps9052.3;Parent=Thaps9052;constitutive=1;rank=3 chr12 . repeat_region 419748 419756 . ? . description=dust chr12 . repeat_region 419974 419992 . ? . description=dust chr12 . repeat_region 421421 421519 . ? . description=trf chr12 . repeat_region 422992 423012 . ? . description=trf chr12 . repeat_region 422992 423012 . ? . description=dust chr12 . repeat_region 423092 423161 . ? . description=trf chr12 . repeat_region 423096 423163 . ? . description=trf chr12 . repeat_region 424409 424823 . ? . description=trf chr12 ensembl protein_coding_gene 420029 423964 . + . ID=Thaps24465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA87];external_name=Thaps24465;logic_name=jgi_thaps3 chr12 ensembl transcript 420029 423964 . + . ID=Thaps24465;Parent=Thaps24465;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 420029 423964 . + 0 ID=Thaps24465;Parent=Thaps24465;rank=1 chr12 . exon 420029 423964 . + . ID=Thaps24465.1;Parent=Thaps24465;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 424279 425750 . - . ID=Thaps24466;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA88];external_name=Thaps24466;logic_name=jgi_thaps3 chr12 ensembl transcript 424279 425750 . - . ID=Thaps24466;Parent=Thaps24466;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 424279 424295 . - 0 ID=Thaps24466;Parent=Thaps24466;rank=6 chr12 . exon 424279 424295 . - . ID=Thaps24466.6;Parent=Thaps24466;constitutive=1;ensembl_end_phase=2;rank=6 chr12 . CDS 424393 424507 . - 0 ID=Thaps24466;Parent=Thaps24466;rank=5 chr12 . exon 424393 424507 . - . ID=Thaps24466.5;Parent=Thaps24466;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . CDS 424561 424950 . - 0 ID=Thaps24466;Parent=Thaps24466;rank=4 chr12 . exon 424561 424950 . - . ID=Thaps24466.4;Parent=Thaps24466;constitutive=1;rank=4 chr12 . CDS 425058 425160 . - 0 ID=Thaps24466;Parent=Thaps24466;rank=3 chr12 . exon 425058 425160 . - . ID=Thaps24466.3;Parent=Thaps24466;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 425238 425279 . - 0 ID=Thaps24466;Parent=Thaps24466;rank=2 chr12 . exon 425238 425279 . - . ID=Thaps24466.2;Parent=Thaps24466;constitutive=1;rank=2 chr12 . CDS 425344 425750 . - 0 ID=Thaps24466;Parent=Thaps24466;rank=1 chr12 . exon 425344 425750 . - . ID=Thaps24466.1;Parent=Thaps24466;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 428640 429164 . - . ID=Thaps263887;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA90];external_name=Thaps263887;logic_name=jgi_thaps3 chr12 ensembl transcript 428640 429164 . - . ID=Thaps263887;Parent=Thaps263887;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 428640 428955 . - 0 ID=Thaps263887;Parent=Thaps263887;rank=3 chr12 . exon 428640 428955 . - . ID=Thaps263887.3;Parent=Thaps263887;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 428997 429001 . - 0 ID=Thaps263887;Parent=Thaps263887;rank=2 chr12 . exon 428997 429001 . - . ID=Thaps263887.2;Parent=Thaps263887;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 429012 429164 . - 0 ID=Thaps263887;Parent=Thaps263887;rank=1 chr12 . exon 429012 429164 . - . ID=Thaps263887.1;Parent=Thaps263887;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 426225 428057 . + . ID=Thaps9055;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA89];external_name=Thaps9055;logic_name=jgi_thaps3 chr12 ensembl transcript 426225 428057 . + . ID=Thaps9055;Parent=Thaps9055;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 426225 428057 . + 0 ID=Thaps9055;Parent=Thaps9055;rank=1 chr12 . exon 426225 428057 . + . ID=Thaps9055.1;Parent=Thaps9055;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 435565 437016 . + . ID=Thaps24468;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA92];external_name=Thaps24468;logic_name=jgi_thaps3 chr12 ensembl transcript 435565 437016 . + . ID=Thaps24468;Parent=Thaps24468;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 435565 437016 . + 0 ID=Thaps24468;Parent=Thaps24468;rank=1 chr12 . exon 435565 437016 . + . ID=Thaps24468.1;Parent=Thaps24468;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 433098 434944 . - . ID=Thaps9057;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA91];external_name=Thaps9057;logic_name=jgi_thaps3 chr12 ensembl transcript 433098 434944 . - . ID=Thaps9057;Parent=Thaps9057;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 433098 434117 . - 0 ID=Thaps9057;Parent=Thaps9057;rank=3 chr12 . exon 433098 434117 . - . ID=Thaps9057.3;Parent=Thaps9057;constitutive=1;rank=3 chr12 . CDS 434529 434639 . - 0 ID=Thaps9057;Parent=Thaps9057;rank=2 chr12 . exon 434529 434639 . - . ID=Thaps9057.2;Parent=Thaps9057;constitutive=1;rank=2 chr12 . CDS 434750 434944 . - 0 ID=Thaps9057;Parent=Thaps9057;rank=1 chr12 . exon 434750 434944 . - . ID=Thaps9057.1;Parent=Thaps9057;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 438789 439214 . - . ID=Thaps9060;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA93];external_name=Thaps9060;logic_name=jgi_thaps3 chr12 ensembl transcript 438789 439214 . - . ID=Thaps9060;Parent=Thaps9060;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 438789 439214 . - 0 ID=Thaps9060;Parent=Thaps9060;rank=1 chr12 . exon 438789 439214 . - . ID=Thaps9060.1;Parent=Thaps9060;constitutive=1;rank=1 chr12 . repeat_region 439542 439550 . ? . description=dust chr12 . repeat_region 439600 439651 . ? . description=dust chr12 ensembl snoRNA_gene 447212 447309 . + . ID=EPrTPOG00000000115;biotype=snoRNA;description=Small nucleolar RNA SNORD14 [Source:RFAM%3BAcc:RF00016];external_name=SNORD14;logic_name=ncrna_eg chr12 ensembl snoRNA 447212 447309 . + . ID=EPrTPOT00000000115;Parent=EPrTPOG00000000115;biotype=snoRNA;logic_name=ncrna_eg chr12 . exon 447212 447309 . + . ID=EPrTPOE00000000115;Parent=EPrTPOT00000000115;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 446177 447902 . - . ID=Thaps269616;biotype=protein_coding;description=Elongation factor Tu [Source:UniProtKB/TrEMBL%3BAcc:B8CA96];external_name=Thaps269616;logic_name=jgi_thaps3 chr12 ensembl transcript 446177 447902 . - . ID=Thaps269616;Parent=Thaps269616;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 446177 446361 . - 0 ID=Thaps269616;Parent=Thaps269616;rank=4 chr12 . exon 446177 446361 . - . ID=Thaps269616.4;Parent=Thaps269616;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 446441 447127 . - 0 ID=Thaps269616;Parent=Thaps269616;rank=3 chr12 . exon 446441 447127 . - . ID=Thaps269616.3;Parent=Thaps269616;constitutive=1;rank=3 chr12 . CDS 447379 447452 . - 0 ID=Thaps269616;Parent=Thaps269616;rank=2 chr12 . exon 447379 447452 . - . ID=Thaps269616.2;Parent=Thaps269616;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 447556 447902 . - 0 ID=Thaps269616;Parent=Thaps269616;rank=1 chr12 . exon 447556 447902 . - . ID=Thaps269616.1;Parent=Thaps269616;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 440304 443987 . + . ID=Thaps36845;biotype=protein_coding;description=DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8CA95];external_name=RPA2_1;logic_name=jgi_thaps3 chr12 ensembl transcript 440304 443987 . + . ID=Thaps36845;Parent=Thaps36845;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 440304 440947 . + 0 ID=Thaps36845;Parent=Thaps36845;rank=1 chr12 . exon 440304 440947 . + . ID=Thaps36845.1;Parent=Thaps36845;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 441035 441909 . + 0 ID=Thaps36845;Parent=Thaps36845;rank=2 chr12 . exon 441035 441909 . + . ID=Thaps36845.2;Parent=Thaps36845;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 441999 442254 . + 0 ID=Thaps36845;Parent=Thaps36845;rank=3 chr12 . exon 441999 442254 . + . ID=Thaps36845.3;Parent=Thaps36845;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 442338 442614 . + 0 ID=Thaps36845;Parent=Thaps36845;rank=4 chr12 . exon 442338 442614 . + . ID=Thaps36845.4;Parent=Thaps36845;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 442672 443202 . + 0 ID=Thaps36845;Parent=Thaps36845;rank=5 chr12 . exon 442672 443202 . + . ID=Thaps36845.5;Parent=Thaps36845;constitutive=1;rank=5 chr12 . CDS 443285 443548 . + 0 ID=Thaps36845;Parent=Thaps36845;rank=6 chr12 . exon 443285 443548 . + . ID=Thaps36845.6;Parent=Thaps36845;constitutive=1;rank=6 chr12 . CDS 443625 443987 . + 0 ID=Thaps36845;Parent=Thaps36845;rank=7 chr12 . exon 443625 443987 . + . ID=Thaps36845.7;Parent=Thaps36845;constitutive=1;rank=7 chr12 ensembl protein_coding_gene 439836 440150 . + . ID=Thaps9061;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA94];external_name=Thaps9061;logic_name=jgi_thaps3 chr12 ensembl transcript 439836 440150 . + . ID=Thaps9061;Parent=Thaps9061;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 439836 440150 . + 0 ID=Thaps9061;Parent=Thaps9061;rank=1 chr12 . exon 439836 440150 . + . ID=Thaps9061.1;Parent=Thaps9061;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 448402 448987 . + . ID=Thaps9065;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CA97];external_name=Thaps9065;logic_name=jgi_thaps3 chr12 ensembl transcript 448402 448987 . + . ID=Thaps9065;Parent=Thaps9065;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 448402 448634 . + 0 ID=Thaps9065;Parent=Thaps9065;rank=1 chr12 . exon 448402 448634 . + . ID=Thaps9065.1;Parent=Thaps9065;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 448801 448987 . + 0 ID=Thaps9065;Parent=Thaps9065;rank=2 chr12 . exon 448801 448987 . + . ID=Thaps9065.2;Parent=Thaps9065;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . repeat_region 458498 458536 . ? . description=trf chr12 ensembl protein_coding_gene 452481 453707 . + . ID=Thaps24475;biotype=protein_coding;description=26S proteasome ATPase regulatory subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CAA1];external_name=RPT3;logic_name=jgi_thaps3 chr12 ensembl transcript 452481 453707 . + . ID=Thaps24475;Parent=Thaps24475;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 452481 452976 . + 0 ID=Thaps24475;Parent=Thaps24475;rank=1 chr12 . exon 452481 452976 . + . ID=Thaps24475.1;Parent=Thaps24475;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 453079 453707 . + 0 ID=Thaps24475;Parent=Thaps24475;rank=2 chr12 . exon 453079 453707 . + . ID=Thaps24475.2;Parent=Thaps24475;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 453876 454640 . - . ID=Thaps24477;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAA2];external_name=Thaps24477;logic_name=jgi_thaps3 chr12 ensembl transcript 453876 454640 . - . ID=Thaps24477;Parent=Thaps24477;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 453876 454640 . - 0 ID=Thaps24477;Parent=Thaps24477;rank=1 chr12 . exon 453876 454640 . - . ID=Thaps24477.1;Parent=Thaps24477;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 454900 457029 . - . ID=Thaps24478;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAA3];external_name=Thaps24478;logic_name=jgi_thaps3 chr12 ensembl transcript 454900 457029 . - . ID=Thaps24478;Parent=Thaps24478;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 454900 457029 . - 0 ID=Thaps24478;Parent=Thaps24478;rank=1 chr12 . exon 454900 457029 . - . ID=Thaps24478.1;Parent=Thaps24478;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 458778 460186 . - . ID=Thaps24479;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAA5];external_name=Thaps24479;logic_name=jgi_thaps3 chr12 ensembl transcript 458778 460186 . - . ID=Thaps24479;Parent=Thaps24479;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 458778 458786 . - 0 ID=Thaps24479;Parent=Thaps24479;rank=3 chr12 . exon 458778 458786 . - . ID=Thaps24479.3;Parent=Thaps24479;constitutive=1;rank=3 chr12 . CDS 458969 459815 . - 0 ID=Thaps24479;Parent=Thaps24479;rank=2 chr12 . exon 458969 459815 . - . ID=Thaps24479.2;Parent=Thaps24479;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 459861 460186 . - 0 ID=Thaps24479;Parent=Thaps24479;rank=1 chr12 ensembl protein_coding_gene 449503 450026 . - . ID=Thaps36811;biotype=protein_coding;description=Histone H3 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD6];external_name=H3-2;logic_name=jgi_thaps3 chr12 ensembl transcript 449503 450026 . - . ID=Thaps36811;Parent=Thaps36811;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 449503 449800 . - 0 ID=Thaps36811;Parent=Thaps36811;rank=2 chr12 . exon 449503 449800 . - . ID=Thaps36811.2;Parent=Thaps36811;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 449914 450026 . - 0 ID=Thaps36811;Parent=Thaps36811;rank=1 chr12 . exon 449914 450026 . - . ID=Thaps36811.1;Parent=Thaps36811;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 451250 451906 . - . ID=Thaps36986;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAA0];external_name=Thaps36986;logic_name=jgi_thaps3 chr12 ensembl transcript 451250 451906 . - . ID=Thaps36986;Parent=Thaps36986;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 451250 451906 . - 0 ID=Thaps36986;Parent=Thaps36986;rank=1 chr12 . exon 451250 451906 . - . ID=Thaps36986.1;Parent=Thaps36986;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 450336 450647 . + . ID=Thaps9067;biotype=protein_coding;description=Histone H4 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD7];external_name=H4_2;logic_name=jgi_thaps3 chr12 ensembl transcript 450336 450647 . + . ID=Thaps9067;Parent=Thaps9067;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 450336 450647 . + 0 ID=Thaps9067;Parent=Thaps9067;rank=1 chr12 . exon 450336 450647 . + . ID=Thaps9067.1;Parent=Thaps9067;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 457460 458492 . + . ID=Thaps9073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAA4];external_name=Thaps9073;logic_name=jgi_thaps3 chr12 ensembl transcript 457460 458492 . + . ID=Thaps9073;Parent=Thaps9073;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 457460 457787 . + 0 ID=Thaps9073;Parent=Thaps9073;rank=1 chr12 . exon 457460 457787 . + . ID=Thaps9073.1;Parent=Thaps9073;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 457881 458137 . + 0 ID=Thaps9073;Parent=Thaps9073;rank=2 chr12 . exon 457881 458137 . + . ID=Thaps9073.2;Parent=Thaps9073;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 458285 458362 . + 0 ID=Thaps9073;Parent=Thaps9073;rank=3 chr12 . exon 458285 458362 . + . ID=Thaps9073.3;Parent=Thaps9073;constitutive=1;rank=3 chr12 . CDS 458424 458492 . + 0 ID=Thaps9073;Parent=Thaps9073;rank=4 chr12 . exon 458424 458492 . + . ID=Thaps9073.4;Parent=Thaps9073;constitutive=1;rank=4 chr12 . repeat_region 468312 468346 . ? . description=dust chr12 . exon 459861 460186 . - . ID=Thaps24479.1;Parent=Thaps24479;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 460556 461647 . - . ID=Thaps24480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAA6];external_name=Thaps24480;logic_name=jgi_thaps3 chr12 ensembl transcript 460556 461647 . - . ID=Thaps24480;Parent=Thaps24480;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 460556 461647 . - 0 ID=Thaps24480;Parent=Thaps24480;rank=1 chr12 . exon 460556 461647 . - . ID=Thaps24480.1;Parent=Thaps24480;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 465251 467977 . - . ID=Thaps263899;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAA8];external_name=Thaps263899;logic_name=jgi_thaps3 chr12 ensembl transcript 465251 467977 . - . ID=Thaps263899;Parent=Thaps263899;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 465251 465394 . - 0 ID=Thaps263899;Parent=Thaps263899;rank=6 chr12 . exon 465251 465394 . - . ID=Thaps263899.6;Parent=Thaps263899;constitutive=1;rank=6 chr12 . CDS 465479 465612 . - 0 ID=Thaps263899;Parent=Thaps263899;rank=5 chr12 . exon 465479 465612 . - . ID=Thaps263899.5;Parent=Thaps263899;constitutive=1;ensembl_end_phase=2;rank=5 chr12 . CDS 465698 466118 . - 0 ID=Thaps263899;Parent=Thaps263899;rank=4 chr12 . exon 465698 466118 . - . ID=Thaps263899.4;Parent=Thaps263899;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 466198 466319 . - 0 ID=Thaps263899;Parent=Thaps263899;rank=3 chr12 . exon 466198 466319 . - . ID=Thaps263899.3;Parent=Thaps263899;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 466404 467657 . - 0 ID=Thaps263899;Parent=Thaps263899;rank=2 chr12 . exon 466404 467657 . - . ID=Thaps263899.2;Parent=Thaps263899;constitutive=1;rank=2 chr12 . CDS 467752 467977 . - 0 ID=Thaps263899;Parent=Thaps263899;rank=1 chr12 . exon 467752 467977 . - . ID=Thaps263899.1;Parent=Thaps263899;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 462194 463942 . + . ID=Thaps269619;biotype=protein_coding;description=Actin related protein centractin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAA7];external_name=ACT5;logic_name=jgi_thaps3 chr12 ensembl transcript 462194 463942 . + . ID=Thaps269619;Parent=Thaps269619;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 462194 462674 . + 0 ID=Thaps269619;Parent=Thaps269619;rank=1 chr12 . exon 462194 462674 . + . ID=Thaps269619.1;Parent=Thaps269619;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 462984 463183 . + 0 ID=Thaps269619;Parent=Thaps269619;rank=2 chr12 . exon 462984 463183 . + . ID=Thaps269619.2;Parent=Thaps269619;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 463490 463619 . + 0 ID=Thaps269619;Parent=Thaps269619;rank=3 chr12 . exon 463490 463619 . + . ID=Thaps269619.3;Parent=Thaps269619;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 463713 463942 . + 0 ID=Thaps269619;Parent=Thaps269619;rank=4 chr12 . exon 463713 463942 . + . ID=Thaps269619.4;Parent=Thaps269619;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . repeat_region 469894 470076 . - . description=Copia4LTR_TP chr12 . repeat_region 470077 470393 . - . description=Copia4I_TP chr12 . repeat_region 470397 470429 . - . description=Copia4I_TP chr12 . repeat_region 472147 472772 . ? . description=trf chr12 ensembl protein_coding_gene 471197 473632 . + . ID=Thaps24482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAA9];external_name=Thaps24482;logic_name=jgi_thaps3 chr12 ensembl transcript 471197 473632 . + . ID=Thaps24482;Parent=Thaps24482;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 471197 473632 . + 0 ID=Thaps24482;Parent=Thaps24482;rank=1 chr12 . exon 471197 473632 . + . ID=Thaps24482.1;Parent=Thaps24482;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 474376 477966 . - . ID=Thaps24483;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB1];external_name=Thaps24483;logic_name=jgi_thaps3 chr12 ensembl transcript 474376 477966 . - . ID=Thaps24483;Parent=Thaps24483;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 474376 477966 . - 0 ID=Thaps24483;Parent=Thaps24483;rank=1 chr12 . exon 474376 477966 . - . ID=Thaps24483.1;Parent=Thaps24483;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 478898 480513 . - . ID=Thaps24484;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB2];external_name=Thaps24484;logic_name=jgi_thaps3 chr12 ensembl transcript 478898 480513 . - . ID=Thaps24484;Parent=Thaps24484;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 478898 479371 . - 0 ID=Thaps24484;Parent=Thaps24484;rank=3 chr12 . exon 478898 479371 . - . ID=Thaps24484.3;Parent=Thaps24484;constitutive=1;rank=3 chr12 . CDS 479471 480064 . - 0 ID=Thaps24484;Parent=Thaps24484;rank=2 chr12 . CDS 480244 480513 . - 0 ID=Thaps24484;Parent=Thaps24484;rank=1 chr12 ensembl protein_coding_gene 473660 474241 . - . ID=Thaps9079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB0];external_name=Thaps9079;logic_name=jgi_thaps3 chr12 ensembl transcript 473660 474241 . - . ID=Thaps9079;Parent=Thaps9079;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 473660 474241 . - 0 ID=Thaps9079;Parent=Thaps9079;rank=1 chr12 . exon 473660 474241 . - . ID=Thaps9079.1;Parent=Thaps9079;constitutive=1;rank=1 chr12 . repeat_region 486612 486642 . ? . description=dust chr12 . exon 479471 480064 . - . ID=Thaps24484.2;Parent=Thaps24484;constitutive=1;rank=2 chr12 . exon 480244 480513 . - . ID=Thaps24484.1;Parent=Thaps24484;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 482610 485564 . - . ID=Thaps24486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB4];external_name=Thaps24486;logic_name=jgi_thaps3 chr12 ensembl transcript 482610 485564 . - . ID=Thaps24486;Parent=Thaps24486;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 482610 485060 . - 0 ID=Thaps24486;Parent=Thaps24486;rank=3 chr12 . exon 482610 485060 . - . ID=Thaps24486.3;Parent=Thaps24486;constitutive=1;rank=3 chr12 . CDS 485163 485276 . - 0 ID=Thaps24486;Parent=Thaps24486;rank=2 chr12 . exon 485163 485276 . - . ID=Thaps24486.2;Parent=Thaps24486;constitutive=1;rank=2 chr12 . CDS 485349 485564 . - 0 ID=Thaps24486;Parent=Thaps24486;rank=1 chr12 . exon 485349 485564 . - . ID=Thaps24486.1;Parent=Thaps24486;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 486168 487319 . + . ID=Thaps263902;biotype=protein_coding;description=Tocopherol polyprenyltransferase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB5];external_name=Thaps263902;logic_name=jgi_thaps3 chr12 ensembl transcript 486168 487319 . + . ID=Thaps263902;Parent=Thaps263902;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 486168 486481 . + 0 ID=Thaps263902;Parent=Thaps263902;rank=1 chr12 . exon 486168 486481 . + . ID=Thaps263902.1;Parent=Thaps263902;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 486644 486935 . + 0 ID=Thaps263902;Parent=Thaps263902;rank=2 chr12 . exon 486644 486935 . + . ID=Thaps263902.2;Parent=Thaps263902;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 487032 487319 . + 0 ID=Thaps263902;Parent=Thaps263902;rank=3 chr12 . exon 487032 487319 . + . ID=Thaps263902.3;Parent=Thaps263902;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 481218 482264 . + . ID=Thaps26393;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB3];external_name=UBC1;logic_name=jgi_thaps3 chr12 ensembl transcript 481218 482264 . + . ID=Thaps26393;Parent=Thaps26393;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 481218 481261 . + 0 ID=Thaps26393;Parent=Thaps26393;rank=1 chr12 . exon 481218 481261 . + . ID=Thaps26393.1;Parent=Thaps26393;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 481847 482264 . + 0 ID=Thaps26393;Parent=Thaps26393;rank=2 chr12 . exon 481847 482264 . + . ID=Thaps26393.2;Parent=Thaps26393;constitutive=1;ensembl_end_phase=1;rank=2 chr12 ensembl protein_coding_gene 487560 488162 . - . ID=Thaps9085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB6];external_name=Thaps9085;logic_name=jgi_thaps3 chr12 ensembl transcript 487560 488162 . - . ID=Thaps9085;Parent=Thaps9085;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 487560 488162 . - 0 ID=Thaps9085;Parent=Thaps9085;rank=1 chr12 . exon 487560 488162 . - . ID=Thaps9085.1;Parent=Thaps9085;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 488665 490225 . - . ID=Thaps9086;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB7];external_name=Thaps9086;logic_name=jgi_thaps3 chr12 ensembl transcript 488665 490225 . - . ID=Thaps9086;Parent=Thaps9086;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 488665 489636 . - 0 ID=Thaps9086;Parent=Thaps9086;rank=3 chr12 . exon 488665 489636 . - . ID=Thaps9086.3;Parent=Thaps9086;constitutive=1;rank=3 chr12 . CDS 489743 489830 . - 0 ID=Thaps9086;Parent=Thaps9086;rank=2 chr12 . CDS 490068 490225 . - 0 ID=Thaps9086;Parent=Thaps9086;rank=1 chr12 . repeat_region 495180 495234 . ? . description=trf chr12 . repeat_region 496091 496112 . ? . description=trf chr12 ensembl protein_coding_gene 495244 495474 . - . ID=Thaps20223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB9];external_name=Thaps20223;logic_name=jgi_thaps3 chr12 ensembl transcript 495244 495474 . - . ID=Thaps20223;Parent=Thaps20223;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 495244 495474 . - 0 ID=Thaps20223;Parent=Thaps20223;rank=1 chr12 . exon 495244 495474 . - . ID=Thaps20223.1;Parent=Thaps20223;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 498483 499574 . + . ID=Thaps24488;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC1];external_name=Thaps24488;logic_name=jgi_thaps3 chr12 ensembl transcript 498483 499574 . + . ID=Thaps24488;Parent=Thaps24488;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 498483 499055 . + 0 ID=Thaps24488;Parent=Thaps24488;rank=1 chr12 . exon 498483 499055 . + . ID=Thaps24488.1;Parent=Thaps24488;constitutive=1;rank=1 chr12 . CDS 499320 499574 . + 0 ID=Thaps24488;Parent=Thaps24488;rank=2 chr12 ensembl protein_coding_gene 497023 497483 . + . ID=Thaps263903;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC0];external_name=Thaps263903;logic_name=jgi_thaps3 chr12 ensembl transcript 497023 497483 . + . ID=Thaps263903;Parent=Thaps263903;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 497023 497094 . + 0 ID=Thaps263903;Parent=Thaps263903;rank=1 chr12 . exon 497023 497094 . + . ID=Thaps263903.1;Parent=Thaps263903;constitutive=1;rank=1 chr12 . CDS 497215 497483 . + 0 ID=Thaps263903;Parent=Thaps263903;rank=2 chr12 . exon 497215 497483 . + . ID=Thaps263903.2;Parent=Thaps263903;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . exon 489743 489830 . - . ID=Thaps9086.2;Parent=Thaps9086;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 490068 490225 . - . ID=Thaps9086.1;Parent=Thaps9086;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 490627 491655 . + . ID=Thaps9087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAB8];external_name=Thaps9087;logic_name=jgi_thaps3 chr12 ensembl transcript 490627 491655 . + . ID=Thaps9087;Parent=Thaps9087;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 490627 491655 . + 0 ID=Thaps9087;Parent=Thaps9087;rank=1 chr12 . exon 490627 491655 . + . ID=Thaps9087.1;Parent=Thaps9087;constitutive=1;rank=1 chr12 . exon 499320 499574 . + . ID=Thaps24488.2;Parent=Thaps24488;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 505612 513761 . + . ID=Thaps24489;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC4];external_name=Thaps24489;logic_name=jgi_thaps3 chr12 ensembl transcript 505612 513761 . + . ID=Thaps24489;Parent=Thaps24489;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 505612 505664 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=1 chr12 . exon 505612 505664 . + . ID=Thaps24489.1;Parent=Thaps24489;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 505732 508199 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=2 chr12 . exon 505732 508199 . + . ID=Thaps24489.2;Parent=Thaps24489;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 508330 509885 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=3 chr12 . exon 508330 509885 . + . ID=Thaps24489.3;Parent=Thaps24489;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 509919 510798 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=4 chr12 . CDS 510853 511411 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=5 chr12 . CDS 511513 512039 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=6 chr12 . CDS 512113 512484 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=7 chr12 . CDS 512563 512840 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=8 chr12 . CDS 512913 512964 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=9 chr12 . CDS 513049 513761 . + 0 ID=Thaps24489;Parent=Thaps24489;rank=10 chr12 ensembl protein_coding_gene 501921 502973 . - . ID=Thaps9091;biotype=protein_coding;description=Phosphatidylinositol/phosphatidylcholine transfer protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC2];external_name=Thaps9091;logic_name=jgi_thaps3 chr12 ensembl transcript 501921 502973 . - . ID=Thaps9091;Parent=Thaps9091;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 501921 502973 . - 0 ID=Thaps9091;Parent=Thaps9091;rank=1 chr12 . exon 501921 502973 . - . ID=Thaps9091.1;Parent=Thaps9091;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 503644 505386 . + . ID=Thaps9092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC3];external_name=Thaps9092;logic_name=jgi_thaps3 chr12 ensembl transcript 503644 505386 . + . ID=Thaps9092;Parent=Thaps9092;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 503644 505386 . + 0 ID=Thaps9092;Parent=Thaps9092;rank=1 chr12 . exon 503644 505386 . + . ID=Thaps9092.1;Parent=Thaps9092;constitutive=1;rank=1 chr12 . repeat_region 514370 514378 . ? . description=dust chr12 . repeat_region 516047 516334 . + . description=TE1A_TP chr12 . exon 509919 510798 . + . ID=Thaps24489.4;Parent=Thaps24489;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . exon 510853 511411 . + . ID=Thaps24489.5;Parent=Thaps24489;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . exon 511513 512039 . + . ID=Thaps24489.6;Parent=Thaps24489;constitutive=1;ensembl_end_phase=2;rank=6 chr12 . exon 512113 512484 . + . ID=Thaps24489.7;Parent=Thaps24489;constitutive=1;rank=7 chr12 . exon 512563 512840 . + . ID=Thaps24489.8;Parent=Thaps24489;constitutive=1;ensembl_end_phase=2;rank=8 chr12 . exon 512913 512964 . + . ID=Thaps24489.9;Parent=Thaps24489;constitutive=1;ensembl_end_phase=1;rank=9 chr12 . exon 513049 513761 . + . ID=Thaps24489.10;Parent=Thaps24489;constitutive=1;ensembl_end_phase=2;rank=10 chr12 ensembl protein_coding_gene 514495 515868 . - . ID=Thaps24490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC5];external_name=Thaps24490;logic_name=jgi_thaps3 chr12 ensembl transcript 514495 515868 . - . ID=Thaps24490;Parent=Thaps24490;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 514495 515273 . - 0 ID=Thaps24490;Parent=Thaps24490;rank=2 chr12 . exon 514495 515273 . - . ID=Thaps24490.2;Parent=Thaps24490;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 515325 515868 . - 0 ID=Thaps24490;Parent=Thaps24490;rank=1 chr12 . exon 515325 515868 . - . ID=Thaps24490.1;Parent=Thaps24490;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 516600 517771 . + . ID=Thaps24491;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC6];external_name=Thaps24491;logic_name=jgi_thaps3 chr12 ensembl transcript 516600 517771 . + . ID=Thaps24491;Parent=Thaps24491;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 516600 516741 . + 0 ID=Thaps24491;Parent=Thaps24491;rank=1 chr12 . exon 516600 516741 . + . ID=Thaps24491.1;Parent=Thaps24491;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 516825 517771 . + 0 ID=Thaps24491;Parent=Thaps24491;rank=2 chr12 . exon 516825 517771 . + . ID=Thaps24491.2;Parent=Thaps24491;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 518145 521275 . + . ID=Thaps24492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC7];external_name=Thaps24492;logic_name=jgi_thaps3 chr12 ensembl transcript 518145 521275 . + . ID=Thaps24492;Parent=Thaps24492;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 518145 519062 . + 0 ID=Thaps24492;Parent=Thaps24492;rank=1 chr12 . exon 518145 519062 . + . ID=Thaps24492.1;Parent=Thaps24492;constitutive=1;rank=1 chr12 . CDS 519141 520008 . + 0 ID=Thaps24492;Parent=Thaps24492;rank=2 chr12 . exon 519141 520008 . + . ID=Thaps24492.2;Parent=Thaps24492;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 520356 521275 . + 0 ID=Thaps24492;Parent=Thaps24492;rank=3 chr12 . repeat_region 528613 528665 . ? . description=trf chr12 . exon 520356 521275 . + . ID=Thaps24492.3;Parent=Thaps24492;constitutive=1;ensembl_end_phase=2;rank=3 chr12 ensembl protein_coding_gene 526317 528884 . + . ID=Thaps24493;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD0];external_name=Thaps24493;logic_name=jgi_thaps3 chr12 ensembl transcript 526317 528884 . + . ID=Thaps24493;Parent=Thaps24493;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 526317 528884 . + 0 ID=Thaps24493;Parent=Thaps24493;rank=1 chr12 . exon 526317 528884 . + . ID=Thaps24493.1;Parent=Thaps24493;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 522839 523036 . - . ID=Thaps36879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC9];external_name=Thaps36879;logic_name=jgi_thaps3 chr12 ensembl transcript 522839 523036 . - . ID=Thaps36879;Parent=Thaps36879;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 522839 523036 . - 0 ID=Thaps36879;Parent=Thaps36879;rank=1 chr12 . exon 522839 523036 . - . ID=Thaps36879.1;Parent=Thaps36879;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 521473 522284 . + . ID=Thaps9097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAC8];external_name=Thaps9097;logic_name=jgi_thaps3 chr12 ensembl transcript 521473 522284 . + . ID=Thaps9097;Parent=Thaps9097;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 521473 521978 . + 0 ID=Thaps9097;Parent=Thaps9097;rank=1 chr12 . exon 521473 521978 . + . ID=Thaps9097.1;Parent=Thaps9097;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 522107 522284 . + 0 ID=Thaps9097;Parent=Thaps9097;rank=2 chr12 . exon 522107 522284 . + . ID=Thaps9097.2;Parent=Thaps9097;constitutive=1;ensembl_end_phase=1;rank=2 chr12 ensembl protein_coding_gene 529130 530485 . - . ID=Thaps9099;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD1];external_name=Thaps9099;logic_name=jgi_thaps3 chr12 ensembl transcript 529130 530485 . - . ID=Thaps9099;Parent=Thaps9099;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 529130 529885 . - 0 ID=Thaps9099;Parent=Thaps9099;rank=3 chr12 . exon 529130 529885 . - . ID=Thaps9099.3;Parent=Thaps9099;constitutive=1;rank=3 chr12 . CDS 529978 530269 . - 0 ID=Thaps9099;Parent=Thaps9099;rank=2 chr12 . CDS 530361 530485 . - 0 ID=Thaps9099;Parent=Thaps9099;rank=1 chr12 . repeat_region 536420 536470 . ? . description=dust chr12 ensembl protein_coding_gene 531248 532489 . - . ID=Thaps24494;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD2];external_name=Thaps24494;logic_name=jgi_thaps3 chr12 ensembl transcript 531248 532489 . - . ID=Thaps24494;Parent=Thaps24494;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 531248 532489 . - 0 ID=Thaps24494;Parent=Thaps24494;rank=1 chr12 . exon 531248 532489 . - . ID=Thaps24494.1;Parent=Thaps24494;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 534523 535576 . + . ID=Thaps24495;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD4];external_name=Thaps24495;logic_name=jgi_thaps3 chr12 ensembl transcript 534523 535576 . + . ID=Thaps24495;Parent=Thaps24495;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 534523 534623 . + 0 ID=Thaps24495;Parent=Thaps24495;rank=1 chr12 . exon 534523 534623 . + . ID=Thaps24495.1;Parent=Thaps24495;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 534829 535576 . + 0 ID=Thaps24495;Parent=Thaps24495;rank=2 chr12 . exon 534829 535576 . + . ID=Thaps24495.2;Parent=Thaps24495;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 529978 530269 . - . ID=Thaps9099.2;Parent=Thaps9099;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 530361 530485 . - . ID=Thaps9099.1;Parent=Thaps9099;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 532662 533340 . + . ID=Thaps9101;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD3];external_name=Thaps9101;logic_name=jgi_thaps3 chr12 ensembl transcript 532662 533340 . + . ID=Thaps9101;Parent=Thaps9101;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 532662 532944 . + 0 ID=Thaps9101;Parent=Thaps9101;rank=1 chr12 . exon 532662 532944 . + . ID=Thaps9101.1;Parent=Thaps9101;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 533054 533340 . + 0 ID=Thaps9101;Parent=Thaps9101;rank=2 chr12 . exon 533054 533340 . + . ID=Thaps9101.2;Parent=Thaps9101;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 537163 540001 . + . ID=Thaps9103;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD5];external_name=Thaps9103;logic_name=jgi_thaps3 chr12 ensembl transcript 537163 540001 . + . ID=Thaps9103;Parent=Thaps9103;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 537163 539845 . + 0 ID=Thaps9103;Parent=Thaps9103;rank=1 chr12 . exon 537163 539845 . + . ID=Thaps9103.1;Parent=Thaps9103;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 539982 540001 . + 0 ID=Thaps9103;Parent=Thaps9103;rank=2 chr12 . repeat_region 546629 546675 . ? . description=trf chr12 ensembl protein_coding_gene 540642 542705 . - . ID=Thaps24496;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD6];external_name=Thaps24496;logic_name=jgi_thaps3 chr12 ensembl transcript 540642 542705 . - . ID=Thaps24496;Parent=Thaps24496;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 540642 542705 . - 0 ID=Thaps24496;Parent=Thaps24496;rank=1 chr12 . exon 540642 542705 . - . ID=Thaps24496.1;Parent=Thaps24496;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 543073 546166 . - . ID=Thaps24497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD7];external_name=Thaps24497;logic_name=jgi_thaps3 chr12 ensembl transcript 543073 546166 . - . ID=Thaps24497;Parent=Thaps24497;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 543073 543467 . - 0 ID=Thaps24497;Parent=Thaps24497;rank=3 chr12 . exon 543073 543467 . - . ID=Thaps24497.3;Parent=Thaps24497;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 543553 545839 . - 0 ID=Thaps24497;Parent=Thaps24497;rank=2 chr12 . exon 543553 545839 . - . ID=Thaps24497.2;Parent=Thaps24497;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 546074 546166 . - 0 ID=Thaps24497;Parent=Thaps24497;rank=1 chr12 . exon 546074 546166 . - . ID=Thaps24497.1;Parent=Thaps24497;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 546765 547670 . + . ID=Thaps24498;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD8];external_name=Thaps24498;logic_name=jgi_thaps3 chr12 ensembl transcript 546765 547670 . + . ID=Thaps24498;Parent=Thaps24498;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 546765 547670 . + 0 ID=Thaps24498;Parent=Thaps24498;rank=1 chr12 . exon 546765 547670 . + . ID=Thaps24498.1;Parent=Thaps24498;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 547866 548772 . + . ID=Thaps24499;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAD9];external_name=Thaps24499;logic_name=jgi_thaps3 chr12 ensembl transcript 547866 548772 . + . ID=Thaps24499;Parent=Thaps24499;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 547866 548513 . + 0 ID=Thaps24499;Parent=Thaps24499;rank=1 chr12 . exon 547866 548513 . + . ID=Thaps24499.1;Parent=Thaps24499;constitutive=1;rank=1 chr12 . CDS 548593 548629 . + 0 ID=Thaps24499;Parent=Thaps24499;rank=2 chr12 . exon 548593 548629 . + . ID=Thaps24499.2;Parent=Thaps24499;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 548705 548772 . + 0 ID=Thaps24499;Parent=Thaps24499;rank=3 chr12 . exon 548705 548772 . + . ID=Thaps24499.3;Parent=Thaps24499;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . exon 539982 540001 . + . ID=Thaps9103.2;Parent=Thaps9103;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . repeat_region 549700 549707 . ? . description=dust chr12 . repeat_region 549798 549805 . ? . description=dust chr12 . repeat_region 551273 551419 . + . description=Gypsy1ALTR_TP chr12 . repeat_region 551422 552334 . + . description=Gypsy1I_TP chr12 . repeat_region 553057 553093 . + . description=RTE1_TP chr12 ensembl protein_coding_gene 553522 555807 . + . ID=Thaps9108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE0];external_name=Thaps9108;logic_name=jgi_thaps3 chr12 ensembl transcript 553522 555807 . + . ID=Thaps9108;Parent=Thaps9108;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 553522 555807 . + 0 ID=Thaps9108;Parent=Thaps9108;rank=1 chr12 . exon 553522 555807 . + . ID=Thaps9108.1;Parent=Thaps9108;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 555916 556446 . - . ID=Thaps9109;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE1];external_name=Thaps9109;logic_name=jgi_thaps3 chr12 ensembl transcript 555916 556446 . - . ID=Thaps9109;Parent=Thaps9109;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 555916 556446 . - 0 ID=Thaps9109;Parent=Thaps9109;rank=1 chr12 . exon 555916 556446 . - . ID=Thaps9109.1;Parent=Thaps9109;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 556959 557982 . + . ID=Thaps9110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE2];external_name=Thaps9110;logic_name=jgi_thaps3 chr12 ensembl transcript 556959 557982 . + . ID=Thaps9110;Parent=Thaps9110;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 556959 557774 . + 0 ID=Thaps9110;Parent=Thaps9110;rank=1 chr12 . exon 556959 557774 . + . ID=Thaps9110.1;Parent=Thaps9110;constitutive=1;rank=1 chr12 . CDS 557857 557982 . + 0 ID=Thaps9110;Parent=Thaps9110;rank=2 chr12 . exon 557857 557982 . + . ID=Thaps9110.2;Parent=Thaps9110;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 558633 560751 . + . ID=Thaps9111;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE3];external_name=Thaps9111;logic_name=jgi_thaps3 chr12 ensembl transcript 558633 560751 . + . ID=Thaps9111;Parent=Thaps9111;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 558633 558763 . + 0 ID=Thaps9111;Parent=Thaps9111;rank=1 chr12 . exon 558633 558763 . + . ID=Thaps9111.1;Parent=Thaps9111;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 558937 558971 . + 0 ID=Thaps9111;Parent=Thaps9111;rank=2 chr12 . exon 558937 558971 . + . ID=Thaps9111.2;Parent=Thaps9111;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 559070 560751 . + 0 ID=Thaps9111;Parent=Thaps9111;rank=3 chr12 . exon 559070 560751 . + . ID=Thaps9111.3;Parent=Thaps9111;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . repeat_region 562101 562134 . ? . description=trf chr12 ensembl protein_coding_gene 568236 569189 . - . ID=Thaps15638;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE9];external_name=Thaps15638;logic_name=jgi_thaps3 chr12 ensembl transcript 568236 569189 . - . ID=Thaps15638;Parent=Thaps15638;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 568236 568922 . - 0 ID=Thaps15638;Parent=Thaps15638;rank=2 chr12 . exon 568236 568922 . - . ID=Thaps15638.2;Parent=Thaps15638;constitutive=1;rank=2 chr12 . CDS 569031 569189 . - 0 ID=Thaps15638;Parent=Thaps15638;rank=1 chr12 . exon 569031 569189 . - . ID=Thaps15638.1;Parent=Thaps15638;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 564161 565288 . + . ID=Thaps24500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE5];external_name=Thaps24500;logic_name=jgi_thaps3 chr12 ensembl transcript 564161 565288 . + . ID=Thaps24500;Parent=Thaps24500;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 564161 565288 . + 0 ID=Thaps24500;Parent=Thaps24500;rank=1 chr12 . exon 564161 565288 . + . ID=Thaps24500.1;Parent=Thaps24500;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 563125 563554 . - . ID=Thaps263906;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE4];external_name=Thaps263906;logic_name=jgi_thaps3 chr12 ensembl transcript 563125 563554 . - . ID=Thaps263906;Parent=Thaps263906;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 563125 563342 . - 0 ID=Thaps263906;Parent=Thaps263906;rank=2 chr12 . exon 563125 563342 . - . ID=Thaps263906.2;Parent=Thaps263906;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 563455 563554 . - 0 ID=Thaps263906;Parent=Thaps263906;rank=1 chr12 . exon 563455 563554 . - . ID=Thaps263906.1;Parent=Thaps263906;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 565528 566595 . - . ID=Thaps269624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE6];external_name=Thaps269624;logic_name=jgi_thaps3 chr12 ensembl transcript 565528 566595 . - . ID=Thaps269624;Parent=Thaps269624;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 565528 566595 . - 0 ID=Thaps269624;Parent=Thaps269624;rank=1 chr12 . exon 565528 566595 . - . ID=Thaps269624.1;Parent=Thaps269624;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 567008 567184 . + . ID=Thaps36972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE7];external_name=Thaps36972;logic_name=jgi_thaps3 chr12 ensembl transcript 567008 567184 . + . ID=Thaps36972;Parent=Thaps36972;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 567008 567184 . + 0 ID=Thaps36972;Parent=Thaps36972;rank=1 chr12 . exon 567008 567184 . + . ID=Thaps36972.1;Parent=Thaps36972;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 567242 568063 . + . ID=Thaps9115;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAE8];external_name=Thaps9115;logic_name=jgi_thaps3 chr12 ensembl transcript 567242 568063 . + . ID=Thaps9115;Parent=Thaps9115;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 567242 568063 . + 0 ID=Thaps9115;Parent=Thaps9115;rank=1 chr12 . exon 567242 568063 . + . ID=Thaps9115.1;Parent=Thaps9115;constitutive=1;rank=1 chr12 . repeat_region 577185 577230 . ? . description=dust chr12 ensembl protein_coding_gene 573774 575525 . - . ID=Thaps24503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF1];external_name=Thaps24503;logic_name=jgi_thaps3 chr12 ensembl transcript 573774 575525 . - . ID=Thaps24503;Parent=Thaps24503;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 573774 575525 . - 0 ID=Thaps24503;Parent=Thaps24503;rank=1 chr12 . exon 573774 575525 . - . ID=Thaps24503.1;Parent=Thaps24503;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 577867 579123 . + . ID=Thaps29728;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF3];external_name=Thaps29728;logic_name=jgi_thaps3 chr12 ensembl transcript 577867 579123 . + . ID=Thaps29728;Parent=Thaps29728;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 577867 579123 . + 0 ID=Thaps29728;Parent=Thaps29728;rank=1 chr12 . exon 577867 579123 . + . ID=Thaps29728.1;Parent=Thaps29728;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 573358 573687 . + . ID=Thaps36928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF0];external_name=Thaps36928;logic_name=jgi_thaps3 chr12 ensembl transcript 573358 573687 . + . ID=Thaps36928;Parent=Thaps36928;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 573358 573687 . + 0 ID=Thaps36928;Parent=Thaps36928;rank=1 chr12 . exon 573358 573687 . + . ID=Thaps36928.1;Parent=Thaps36928;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 575981 576486 . - . ID=Thaps9118;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF2];external_name=Thaps9118;logic_name=jgi_thaps3 chr12 ensembl transcript 575981 576486 . - . ID=Thaps9118;Parent=Thaps9118;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 575981 576248 . - 0 ID=Thaps9118;Parent=Thaps9118;rank=2 chr12 . exon 575981 576248 . - . ID=Thaps9118.2;Parent=Thaps9118;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 576317 576486 . - 0 ID=Thaps9118;Parent=Thaps9118;rank=1 chr12 . exon 576317 576486 . - . ID=Thaps9118.1;Parent=Thaps9118;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . repeat_region 580839 580896 . + . description=scaffold_6_68_3_186663_187626 chr12 . repeat_region 581108 581360 . + . description=scaffold_20_199_1_463111_465711 chr12 . repeat_region 588905 588963 . ? . description=trf chr12 ensembl protein_coding_gene 579373 582681 . + . ID=Thaps24505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF4];external_name=Thaps24505;logic_name=jgi_thaps3 chr12 ensembl transcript 579373 582681 . + . ID=Thaps24505;Parent=Thaps24505;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 579373 579629 . + 0 ID=Thaps24505;Parent=Thaps24505;rank=1 chr12 . exon 579373 579629 . + . ID=Thaps24505.1;Parent=Thaps24505;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 579810 580818 . + 0 ID=Thaps24505;Parent=Thaps24505;rank=2 chr12 . exon 579810 580818 . + . ID=Thaps24505.2;Parent=Thaps24505;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 581401 582188 . + 0 ID=Thaps24505;Parent=Thaps24505;rank=3 chr12 . exon 581401 582188 . + . ID=Thaps24505.3;Parent=Thaps24505;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 582279 582681 . + 0 ID=Thaps24505;Parent=Thaps24505;rank=4 chr12 . exon 582279 582681 . + . ID=Thaps24505.4;Parent=Thaps24505;constitutive=1;ensembl_end_phase=1;rank=4 chr12 ensembl protein_coding_gene 583893 584669 . - . ID=Thaps24506;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF5];external_name=Thaps24506;logic_name=jgi_thaps3 chr12 ensembl transcript 583893 584669 . - . ID=Thaps24506;Parent=Thaps24506;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 583893 584669 . - 0 ID=Thaps24506;Parent=Thaps24506;rank=1 chr12 . exon 583893 584669 . - . ID=Thaps24506.1;Parent=Thaps24506;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 588557 591792 . + . ID=Thaps24507;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF7];external_name=Thaps24507;logic_name=jgi_thaps3 chr12 ensembl transcript 588557 591792 . + . ID=Thaps24507;Parent=Thaps24507;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 588557 589861 . + 0 ID=Thaps24507;Parent=Thaps24507;rank=1 chr12 . exon 588557 589861 . + . ID=Thaps24507.1;Parent=Thaps24507;constitutive=1;rank=1 chr12 . CDS 589942 591342 . + 0 ID=Thaps24507;Parent=Thaps24507;rank=2 chr12 . CDS 591430 591792 . + 0 ID=Thaps24507;Parent=Thaps24507;rank=3 chr12 ensembl protein_coding_gene 585930 587074 . - . ID=Thaps9122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF6];external_name=Thaps9122;logic_name=jgi_thaps3 chr12 ensembl transcript 585930 587074 . - . ID=Thaps9122;Parent=Thaps9122;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 585930 586793 . - 0 ID=Thaps9122;Parent=Thaps9122;rank=2 chr12 . exon 585930 586793 . - . ID=Thaps9122.2;Parent=Thaps9122;constitutive=1;rank=2 chr12 . CDS 586955 587074 . - 0 ID=Thaps9122;Parent=Thaps9122;rank=1 chr12 . exon 586955 587074 . - . ID=Thaps9122.1;Parent=Thaps9122;constitutive=1;rank=1 chr12 . repeat_region 592879 592900 . ? . description=dust chr12 . exon 589942 591342 . + . ID=Thaps24507.2;Parent=Thaps24507;constitutive=1;rank=2 chr12 . exon 591430 591792 . + . ID=Thaps24507.3;Parent=Thaps24507;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 595650 598104 . - . ID=Thaps24508;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAG0];external_name=Thaps24508;logic_name=jgi_thaps3 chr12 ensembl transcript 595650 598104 . - . ID=Thaps24508;Parent=Thaps24508;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 595650 595658 . - 0 ID=Thaps24508;Parent=Thaps24508;rank=3 chr12 . exon 595650 595658 . - . ID=Thaps24508.3;Parent=Thaps24508;constitutive=1;rank=3 chr12 . CDS 595715 596682 . - 0 ID=Thaps24508;Parent=Thaps24508;rank=2 chr12 . exon 595715 596682 . - . ID=Thaps24508.2;Parent=Thaps24508;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 596769 598104 . - 0 ID=Thaps24508;Parent=Thaps24508;rank=1 chr12 . exon 596769 598104 . - . ID=Thaps24508.1;Parent=Thaps24508;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 591948 593048 . - . ID=Thaps9124;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF8];external_name=Thaps9124;logic_name=jgi_thaps3 chr12 ensembl transcript 591948 593048 . - . ID=Thaps9124;Parent=Thaps9124;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 591948 593048 . - 0 ID=Thaps9124;Parent=Thaps9124;rank=1 chr12 . exon 591948 593048 . - . ID=Thaps9124.1;Parent=Thaps9124;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 593324 595083 . + . ID=Thaps9125;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAF9];external_name=Thaps9125;logic_name=jgi_thaps3 chr12 ensembl transcript 593324 595083 . + . ID=Thaps9125;Parent=Thaps9125;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 593324 594101 . + 0 ID=Thaps9125;Parent=Thaps9125;rank=1 chr12 . exon 593324 594101 . + . ID=Thaps9125.1;Parent=Thaps9125;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 594270 594991 . + 0 ID=Thaps9125;Parent=Thaps9125;rank=2 chr12 . exon 594270 594991 . + . ID=Thaps9125.2;Parent=Thaps9125;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 595033 595083 . + 0 ID=Thaps9125;Parent=Thaps9125;rank=3 chr12 . exon 595033 595083 . + . ID=Thaps9125.3;Parent=Thaps9125;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 598260 604103 . + . ID=Thaps9127;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAG1];external_name=Thaps9127;logic_name=jgi_thaps3 chr12 ensembl transcript 598260 604103 . + . ID=Thaps9127;Parent=Thaps9127;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 598260 598286 . + 0 ID=Thaps9127;Parent=Thaps9127;rank=1 chr12 . exon 598260 598286 . + . ID=Thaps9127.1;Parent=Thaps9127;constitutive=1;rank=1 chr12 . CDS 598382 598749 . + 0 ID=Thaps9127;Parent=Thaps9127;rank=2 chr12 . exon 598382 598749 . + . ID=Thaps9127.2;Parent=Thaps9127;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 598834 599073 . + 0 ID=Thaps9127;Parent=Thaps9127;rank=3 chr12 . exon 598834 599073 . + . ID=Thaps9127.3;Parent=Thaps9127;constitutive=1;rank=3 chr12 . CDS 599144 601127 . + 0 ID=Thaps9127;Parent=Thaps9127;rank=4 chr12 . exon 599144 601127 . + . ID=Thaps9127.4;Parent=Thaps9127;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 601202 601510 . + 0 ID=Thaps9127;Parent=Thaps9127;rank=5 chr12 . CDS 601598 603767 . + 0 ID=Thaps9127;Parent=Thaps9127;rank=6 chr12 . CDS 603841 604103 . + 0 ID=Thaps9127;Parent=Thaps9127;rank=7 chr12 ensembl protein_coding_gene 605492 607267 . + . ID=Thaps24510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAG3];external_name=Thaps24510;logic_name=jgi_thaps3 chr12 ensembl transcript 605492 607267 . + . ID=Thaps24510;Parent=Thaps24510;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 605492 607267 . + 0 ID=Thaps24510;Parent=Thaps24510;rank=1 chr12 . exon 605492 607267 . + . ID=Thaps24510.1;Parent=Thaps24510;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 604265 604630 . - . ID=Thaps42114;biotype=protein_coding;description=RL35%2C ribosomal protein 35 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8CAG2];external_name=RL35;logic_name=jgi_thaps3 chr12 ensembl transcript 604265 604630 . - . ID=Thaps42114;Parent=Thaps42114;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 604265 604630 . - 0 ID=Thaps42114;Parent=Thaps42114;rank=1 chr12 . exon 604265 604630 . - . ID=Thaps42114.1;Parent=Thaps42114;constitutive=1;rank=1 chr12 . exon 601202 601510 . + . ID=Thaps9127.5;Parent=Thaps9127;constitutive=1;rank=5 chr12 . exon 601598 603767 . + . ID=Thaps9127.6;Parent=Thaps9127;constitutive=1;ensembl_end_phase=1;rank=6 chr12 . exon 603841 604103 . + . ID=Thaps9127.7;Parent=Thaps9127;constitutive=1;ensembl_end_phase=2;rank=7 chr12 ensembl protein_coding_gene 607991 609342 . + . ID=Thaps9130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAG4];external_name=Thaps9130;logic_name=jgi_thaps3 chr12 ensembl transcript 607991 609342 . + . ID=Thaps9130;Parent=Thaps9130;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 607991 608131 . + 0 ID=Thaps9130;Parent=Thaps9130;rank=1 chr12 . exon 607991 608131 . + . ID=Thaps9130.1;Parent=Thaps9130;constitutive=1;rank=1 chr12 . CDS 608278 609342 . + 0 ID=Thaps9130;Parent=Thaps9130;rank=2 chr12 . exon 608278 609342 . + . ID=Thaps9130.2;Parent=Thaps9130;constitutive=1;rank=2 chr12 . repeat_region 613444 613489 . ? . description=dust chr12 . repeat_region 616773 616780 . ? . description=dust chr12 ensembl protein_coding_gene 613084 613801 . + . ID=Thaps24511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAG6];external_name=Thaps24511;logic_name=jgi_thaps3 chr12 ensembl transcript 613084 613801 . + . ID=Thaps24511;Parent=Thaps24511;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 613084 613318 . + 0 ID=Thaps24511;Parent=Thaps24511;rank=1 chr12 . exon 613084 613318 . + . ID=Thaps24511.1;Parent=Thaps24511;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 613494 613801 . + 0 ID=Thaps24511;Parent=Thaps24511;rank=2 chr12 . exon 613494 613801 . + . ID=Thaps24511.2;Parent=Thaps24511;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 615461 616207 . + . ID=Thaps24512;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAG8];external_name=Thaps24512;logic_name=jgi_thaps3 chr12 ensembl transcript 615461 616207 . + . ID=Thaps24512;Parent=Thaps24512;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 615461 616207 . + 0 ID=Thaps24512;Parent=Thaps24512;rank=1 chr12 . exon 615461 616207 . + . ID=Thaps24512.1;Parent=Thaps24512;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 618515 619162 . - . ID=Thaps24514;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAH0];external_name=Thaps24514;logic_name=jgi_thaps3 chr12 ensembl transcript 618515 619162 . - . ID=Thaps24514;Parent=Thaps24514;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 618515 619162 . - 0 ID=Thaps24514;Parent=Thaps24514;rank=1 chr12 . exon 618515 619162 . - . ID=Thaps24514.1;Parent=Thaps24514;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 609665 611222 . - . ID=Thaps9131;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAG5];external_name=Thaps9131;logic_name=jgi_thaps3 chr12 ensembl transcript 609665 611222 . - . ID=Thaps9131;Parent=Thaps9131;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 609665 609705 . - 0 ID=Thaps9131;Parent=Thaps9131;rank=3 chr12 . exon 609665 609705 . - . ID=Thaps9131.3;Parent=Thaps9131;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 609734 610958 . - 0 ID=Thaps9131;Parent=Thaps9131;rank=2 chr12 . exon 609734 610958 . - . ID=Thaps9131.2;Parent=Thaps9131;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 611070 611222 . - 0 ID=Thaps9131;Parent=Thaps9131;rank=1 chr12 . exon 611070 611222 . - . ID=Thaps9131.1;Parent=Thaps9131;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 613884 614801 . - . ID=Thaps9133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAG7];external_name=Thaps9133;logic_name=jgi_thaps3 chr12 ensembl transcript 613884 614801 . - . ID=Thaps9133;Parent=Thaps9133;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 613884 614801 . - 0 ID=Thaps9133;Parent=Thaps9133;rank=1 chr12 . exon 613884 614801 . - . ID=Thaps9133.1;Parent=Thaps9133;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 617346 618393 . + . ID=Thaps9135;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAG9];external_name=Thaps9135;logic_name=jgi_thaps3 chr12 ensembl transcript 617346 618393 . + . ID=Thaps9135;Parent=Thaps9135;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 617346 617800 . + 0 ID=Thaps9135;Parent=Thaps9135;rank=1 chr12 . exon 617346 617800 . + . ID=Thaps9135.1;Parent=Thaps9135;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 617880 618393 . + 0 ID=Thaps9135;Parent=Thaps9135;rank=2 chr12 . exon 617880 618393 . + . ID=Thaps9135.2;Parent=Thaps9135;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . repeat_region 627001 627197 . - . description=Gypsy1ALTR_TP chr12 . repeat_region 627198 631457 . - . description=Gypsy1I_TP chr12 . repeat_region 628129 628174 . ? . description=trf chr12 ensembl protein_coding_gene 620106 622663 . + . ID=Thaps24515;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAH1];external_name=Thaps24515;logic_name=jgi_thaps3 chr12 ensembl transcript 620106 622663 . + . ID=Thaps24515;Parent=Thaps24515;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 620106 620399 . + 0 ID=Thaps24515;Parent=Thaps24515;rank=1 chr12 . exon 620106 620399 . + . ID=Thaps24515.1;Parent=Thaps24515;constitutive=1;rank=1 chr12 . CDS 620497 621098 . + 0 ID=Thaps24515;Parent=Thaps24515;rank=2 chr12 . exon 620497 621098 . + . ID=Thaps24515.2;Parent=Thaps24515;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 621198 621928 . + 0 ID=Thaps24515;Parent=Thaps24515;rank=3 chr12 . exon 621198 621928 . + . ID=Thaps24515.3;Parent=Thaps24515;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 622026 622663 . + 0 ID=Thaps24515;Parent=Thaps24515;rank=4 chr12 . exon 622026 622663 . + . ID=Thaps24515.4;Parent=Thaps24515;constitutive=1;ensembl_end_phase=2;rank=4 chr12 ensembl protein_coding_gene 623293 625392 . - . ID=Thaps263911;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAH2];external_name=Thaps263911;logic_name=jgi_thaps3 chr12 ensembl transcript 623293 625392 . - . ID=Thaps263911;Parent=Thaps263911;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 623293 623412 . - 0 ID=Thaps263911;Parent=Thaps263911;rank=8 chr12 . exon 623293 623412 . - . ID=Thaps263911.8;Parent=Thaps263911;constitutive=1;rank=8 chr12 . CDS 623489 623566 . - 0 ID=Thaps263911;Parent=Thaps263911;rank=7 chr12 . exon 623489 623566 . - . ID=Thaps263911.7;Parent=Thaps263911;constitutive=1;rank=7 chr12 . CDS 623627 623851 . - 0 ID=Thaps263911;Parent=Thaps263911;rank=6 chr12 . exon 623627 623851 . - . ID=Thaps263911.6;Parent=Thaps263911;constitutive=1;rank=6 chr12 . CDS 624190 624311 . - 0 ID=Thaps263911;Parent=Thaps263911;rank=5 chr12 . exon 624190 624311 . - . ID=Thaps263911.5;Parent=Thaps263911;constitutive=1;ensembl_end_phase=2;rank=5 chr12 . CDS 624395 624428 . - 0 ID=Thaps263911;Parent=Thaps263911;rank=4 chr12 . exon 624395 624428 . - . ID=Thaps263911.4;Parent=Thaps263911;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 624764 624853 . - 0 ID=Thaps263911;Parent=Thaps263911;rank=3 chr12 . exon 624764 624853 . - . ID=Thaps263911.3;Parent=Thaps263911;constitutive=1;rank=3 chr12 . CDS 624942 625010 . - 0 ID=Thaps263911;Parent=Thaps263911;rank=2 chr12 . exon 624942 625010 . - . ID=Thaps263911.2;Parent=Thaps263911;constitutive=1;rank=2 chr12 . CDS 625138 625392 . - 0 ID=Thaps263911;Parent=Thaps263911;rank=1 chr12 . exon 625138 625392 . - . ID=Thaps263911.1;Parent=Thaps263911;constitutive=1;rank=1 chr12 ensembl gene 628418 629228 . - . ID=Thaps263913;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr12 ensembl transcript 628418 629228 . - . ID=Thaps263913;Parent=Thaps263913;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr12 . exon 628418 629228 . - . ID=Thaps263913.1;Parent=Thaps263913;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 636660 637684 . - . ID=Thaps711;biotype=protein_coding;description=Sodium dependent bile acid symporter [Source:UniProtKB/TrEMBL%3BAcc:B8CAH3];external_name=Thaps711;logic_name=jgi_thaps3 chr12 ensembl transcript 636660 637684 . - . ID=Thaps711;Parent=Thaps711;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 636660 636926 . - 0 ID=Thaps711;Parent=Thaps711;rank=3 chr12 . exon 636660 636926 . - . ID=Thaps711.3;Parent=Thaps711;constitutive=1;rank=3 chr12 . CDS 637030 637203 . - 0 ID=Thaps711;Parent=Thaps711;rank=2 chr12 . exon 637030 637203 . - . ID=Thaps711.2;Parent=Thaps711;constitutive=1;rank=2 chr12 . CDS 637322 637684 . - 0 ID=Thaps711;Parent=Thaps711;rank=1 chr12 . exon 637322 637684 . - . ID=Thaps711.1;Parent=Thaps711;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 639019 642002 . + . ID=Thaps9141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAH4];external_name=Thaps9141;logic_name=jgi_thaps3 chr12 ensembl transcript 639019 642002 . + . ID=Thaps9141;Parent=Thaps9141;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 639019 640611 . + 0 ID=Thaps9141;Parent=Thaps9141;rank=1 chr12 . exon 639019 640611 . + . ID=Thaps9141.1;Parent=Thaps9141;constitutive=1;rank=1 chr12 . CDS 640716 642002 . + 0 ID=Thaps9141;Parent=Thaps9141;rank=2 chr12 . repeat_region 643761 643797 . ? . description=trf chr12 . repeat_region 644528 644578 . ? . description=trf chr12 . repeat_region 648481 648504 . ? . description=trf chr12 . repeat_region 648481 648504 . ? . description=dust chr12 ensembl protein_coding_gene 646670 649234 . - . ID=Thaps24519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAH7];external_name=Thaps24519;logic_name=jgi_thaps3 chr12 ensembl transcript 646670 649234 . - . ID=Thaps24519;Parent=Thaps24519;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 646670 649234 . - 0 ID=Thaps24519;Parent=Thaps24519;rank=1 chr12 . exon 646670 649234 . - . ID=Thaps24519.1;Parent=Thaps24519;constitutive=1;rank=1 chr12 . exon 640716 642002 . + . ID=Thaps9141.2;Parent=Thaps9141;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 642290 643742 . - . ID=Thaps9142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAH5];external_name=Thaps9142;logic_name=jgi_thaps3 chr12 ensembl transcript 642290 643742 . - . ID=Thaps9142;Parent=Thaps9142;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 642290 643494 . - 0 ID=Thaps9142;Parent=Thaps9142;rank=2 chr12 . exon 642290 643494 . - . ID=Thaps9142.2;Parent=Thaps9142;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 643592 643742 . - 0 ID=Thaps9142;Parent=Thaps9142;rank=1 chr12 . exon 643592 643742 . - . ID=Thaps9142.1;Parent=Thaps9142;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 644400 646262 . + . ID=Thaps9143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAH6];external_name=Thaps9143;logic_name=jgi_thaps3 chr12 ensembl transcript 644400 646262 . + . ID=Thaps9143;Parent=Thaps9143;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 644400 644441 . + 0 ID=Thaps9143;Parent=Thaps9143;rank=1 chr12 . exon 644400 644441 . + . ID=Thaps9143.1;Parent=Thaps9143;constitutive=1;rank=1 chr12 . CDS 644484 644739 . + 0 ID=Thaps9143;Parent=Thaps9143;rank=2 chr12 . exon 644484 644739 . + . ID=Thaps9143.2;Parent=Thaps9143;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 645063 645115 . + 0 ID=Thaps9143;Parent=Thaps9143;rank=3 chr12 . exon 645063 645115 . + . ID=Thaps9143.3;Parent=Thaps9143;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 645143 645485 . + 0 ID=Thaps9143;Parent=Thaps9143;rank=4 chr12 . exon 645143 645485 . + . ID=Thaps9143.4;Parent=Thaps9143;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 645562 646262 . + 0 ID=Thaps9143;Parent=Thaps9143;rank=5 chr12 . exon 645562 646262 . + . ID=Thaps9143.5;Parent=Thaps9143;constitutive=1;ensembl_end_phase=2;rank=5 chr12 . biological_region 658939 658940 0.999 + . logic_name=eponine chr12 ensembl protein_coding_gene 651876 654140 . + . ID=Thaps24521;biotype=protein_coding;description=Glutamine-fructose-6-phosphate transaminase [Source:UniProtKB/TrEMBL%3BAcc:B8CAH9];external_name=GFA_1;logic_name=jgi_thaps3 chr12 ensembl transcript 651876 654140 . + . ID=Thaps24521;Parent=Thaps24521;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 651876 652271 . + 0 ID=Thaps24521;Parent=Thaps24521;rank=1 chr12 . exon 651876 652271 . + . ID=Thaps24521.1;Parent=Thaps24521;constitutive=1;rank=1 chr12 . CDS 652386 654140 . + 0 ID=Thaps24521;Parent=Thaps24521;rank=2 chr12 . exon 652386 654140 . + . ID=Thaps24521.2;Parent=Thaps24521;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 649788 651125 . - . ID=Thaps9145;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAH8];external_name=Thaps9145;logic_name=jgi_thaps3 chr12 ensembl transcript 649788 651125 . - . ID=Thaps9145;Parent=Thaps9145;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 649788 651125 . - 0 ID=Thaps9145;Parent=Thaps9145;rank=1 chr12 . exon 649788 651125 . - . ID=Thaps9145.1;Parent=Thaps9145;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 655702 659505 . - . ID=Thaps9148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI0];external_name=Thaps9148;logic_name=jgi_thaps3 chr12 ensembl transcript 655702 659505 . - . ID=Thaps9148;Parent=Thaps9148;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 655702 659505 . - 0 ID=Thaps9148;Parent=Thaps9148;rank=1 chr12 . exon 655702 659505 . - . ID=Thaps9148.1;Parent=Thaps9148;constitutive=1;rank=1 chr12 . repeat_region 659704 659711 . ? . description=dust chr12 . repeat_region 661535 661858 . ? . description=dust chr12 . repeat_region 663817 663867 . ? . description=trf chr12 . repeat_region 667968 668008 . ? . description=trf chr12 ensembl protein_coding_gene 660721 661383 . - . ID=Thaps18741;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI1];external_name=Thaps18741;logic_name=jgi_thaps3 chr12 ensembl transcript 660721 661383 . - . ID=Thaps18741;Parent=Thaps18741;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 660721 660864 . - 0 ID=Thaps18741;Parent=Thaps18741;rank=3 chr12 . exon 660721 660864 . - . ID=Thaps18741.3;Parent=Thaps18741;constitutive=1;rank=3 chr12 . CDS 660946 661044 . - 0 ID=Thaps18741;Parent=Thaps18741;rank=2 chr12 . exon 660946 661044 . - . ID=Thaps18741.2;Parent=Thaps18741;constitutive=1;rank=2 chr12 . CDS 661204 661383 . - 0 ID=Thaps18741;Parent=Thaps18741;rank=1 chr12 . exon 661204 661383 . - . ID=Thaps18741.1;Parent=Thaps18741;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 666008 668563 . - . ID=Thaps24523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI3];external_name=Thaps24523;logic_name=jgi_thaps3 chr12 ensembl transcript 666008 668563 . - . ID=Thaps24523;Parent=Thaps24523;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 666008 668563 . - 0 ID=Thaps24523;Parent=Thaps24523;rank=1 chr12 . exon 666008 668563 . - . ID=Thaps24523.1;Parent=Thaps24523;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 663689 665388 . + . ID=Thaps9150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI2];external_name=Thaps9150;logic_name=jgi_thaps3 chr12 ensembl transcript 663689 665388 . + . ID=Thaps9150;Parent=Thaps9150;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 663689 663730 . + 0 ID=Thaps9150;Parent=Thaps9150;rank=1 chr12 . exon 663689 663730 . + . ID=Thaps9150.1;Parent=Thaps9150;constitutive=1;rank=1 chr12 . CDS 663773 664028 . + 0 ID=Thaps9150;Parent=Thaps9150;rank=2 chr12 . exon 663773 664028 . + . ID=Thaps9150.2;Parent=Thaps9150;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 664352 664404 . + 0 ID=Thaps9150;Parent=Thaps9150;rank=3 chr12 . exon 664352 664404 . + . ID=Thaps9150.3;Parent=Thaps9150;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 664519 664774 . + 0 ID=Thaps9150;Parent=Thaps9150;rank=4 chr12 . exon 664519 664774 . + . ID=Thaps9150.4;Parent=Thaps9150;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 664850 665388 . + 0 ID=Thaps9150;Parent=Thaps9150;rank=5 chr12 . exon 664850 665388 . + . ID=Thaps9150.5;Parent=Thaps9150;constitutive=1;ensembl_end_phase=2;rank=5 chr12 . repeat_region 669431 669479 . + . description=Gypsy3LTR_TP chr12 . repeat_region 672515 672806 . + . description=TE2c_TP chr12 . repeat_region 673403 673900 . - . description=Harbinger2N_TP chr12 . repeat_region 677852 679342 . + . description=tp16_ASNotSingleton chr12 ensembl protein_coding_gene 669089 669421 . + . ID=Thaps9152;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI4];external_name=Thaps9152;logic_name=jgi_thaps3 chr12 ensembl transcript 669089 669421 . + . ID=Thaps9152;Parent=Thaps9152;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 669089 669421 . + 0 ID=Thaps9152;Parent=Thaps9152;rank=1 chr12 . exon 669089 669421 . + . ID=Thaps9152.1;Parent=Thaps9152;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 671801 672412 . - . ID=Thaps9153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI5];external_name=Thaps9153;logic_name=jgi_thaps3 chr12 ensembl transcript 671801 672412 . - . ID=Thaps9153;Parent=Thaps9153;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 671801 672412 . - 0 ID=Thaps9153;Parent=Thaps9153;rank=1 chr12 . exon 671801 672412 . - . ID=Thaps9153.1;Parent=Thaps9153;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 674215 677662 . + . ID=Thaps9154;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI6];external_name=Thaps9154;logic_name=jgi_thaps3 chr12 ensembl transcript 674215 677662 . + . ID=Thaps9154;Parent=Thaps9154;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 674215 675300 . + 0 ID=Thaps9154;Parent=Thaps9154;rank=1 chr12 . exon 674215 675300 . + . ID=Thaps9154.1;Parent=Thaps9154;constitutive=1;rank=1 chr12 . CDS 675405 677611 . + 0 ID=Thaps9154;Parent=Thaps9154;rank=2 chr12 . exon 675405 677611 . + . ID=Thaps9154.2;Parent=Thaps9154;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 677650 677662 . + 0 ID=Thaps9154;Parent=Thaps9154;rank=3 chr12 . exon 677650 677662 . + . ID=Thaps9154.3;Parent=Thaps9154;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . repeat_region 679421 679477 . ? . description=trf chr12 . repeat_region 679657 679754 . ? . description=dust chr12 . repeat_region 679658 679754 . ? . description=trf chr12 . repeat_region 679988 680107 . ? . description=dust chr12 . repeat_region 680029 680105 . ? . description=trf chr12 . repeat_region 680029 680107 . ? . description=trf chr12 . repeat_region 680436 680479 . ? . description=trf chr12 . repeat_region 681163 681170 . ? . description=dust chr12 . repeat_region 681202 681209 . ? . description=dust chr12 . repeat_region 681448 681624 . ? . description=dust chr12 . repeat_region 681451 681624 . ? . description=trf chr12 . repeat_region 681899 681939 . ? . description=trf chr12 . repeat_region 681899 681941 . ? . description=trf chr12 . repeat_region 681899 681941 . ? . description=dust chr12 . repeat_region 681905 681941 . ? . description=trf chr12 . repeat_region 683966 684199 . + . description=Copia6LTR_TP chr12 . biological_region 684170 684172 0.999 - . logic_name=eponine chr12 . repeat_region 684202 686275 . + . description=Copia6I_TP chr12 . repeat_region 687004 690446 . + . description=Copia6I_TP chr12 ensembl protein_coding_gene 682154 683799 . + . ID=Thaps9155;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI7];external_name=Thaps9155;logic_name=jgi_thaps3 chr12 ensembl transcript 682154 683799 . + . ID=Thaps9155;Parent=Thaps9155;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 682154 682366 . + 0 ID=Thaps9155;Parent=Thaps9155;rank=1 chr12 . exon 682154 682366 . + . ID=Thaps9155.1;Parent=Thaps9155;constitutive=1;rank=1 chr12 . CDS 682442 683086 . + 0 ID=Thaps9155;Parent=Thaps9155;rank=2 chr12 . exon 682442 683086 . + . ID=Thaps9155.2;Parent=Thaps9155;constitutive=1;rank=2 chr12 . CDS 683161 683799 . + 0 ID=Thaps9155;Parent=Thaps9155;rank=3 chr12 . exon 683161 683799 . + . ID=Thaps9155.3;Parent=Thaps9155;constitutive=1;rank=3 chr12 . repeat_region 691249 691572 . - . description=TE2c_TP chr12 ensembl gene 689864 690271 . + . ID=Thaps263917;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr12 ensembl transcript 689864 690271 . + . ID=Thaps263917;Parent=Thaps263917;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr12 . exon 689864 690271 . + . ID=Thaps263917.1;Parent=Thaps263917;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 696684 698576 . + . ID=Thaps42123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI8];external_name=Thaps42123;logic_name=jgi_thaps3 chr12 ensembl transcript 696684 698576 . + . ID=Thaps42123;Parent=Thaps42123;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 696684 696707 . + 0 ID=Thaps42123;Parent=Thaps42123;rank=1 chr12 . exon 696684 696707 . + . ID=Thaps42123.1;Parent=Thaps42123;constitutive=1;rank=1 chr12 . CDS 696822 698576 . + 0 ID=Thaps42123;Parent=Thaps42123;rank=2 chr12 . exon 696822 698576 . + . ID=Thaps42123.2;Parent=Thaps42123;constitutive=1;rank=2 chr12 . biological_region 703375 703376 0.999 + . logic_name=eponine chr12 . repeat_region 704141 704148 . ? . description=dust chr12 ensembl protein_coding_gene 700138 703845 . - . ID=Thaps24525;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI9];external_name=Thaps24525;logic_name=jgi_thaps3 chr12 ensembl transcript 700138 703845 . - . ID=Thaps24525;Parent=Thaps24525;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 700138 703845 . - 0 ID=Thaps24525;Parent=Thaps24525;rank=1 chr12 . exon 700138 703845 . - . ID=Thaps24525.1;Parent=Thaps24525;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 705158 705820 . - . ID=Thaps36995;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAI1];external_name=Thaps36995;logic_name=jgi_thaps3 chr12 ensembl transcript 705158 705820 . - . ID=Thaps36995;Parent=Thaps36995;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 705158 705301 . - 0 ID=Thaps36995;Parent=Thaps36995;rank=3 chr12 . exon 705158 705301 . - . ID=Thaps36995.3;Parent=Thaps36995;constitutive=1;rank=3 chr12 . CDS 705383 705481 . - 0 ID=Thaps36995;Parent=Thaps36995;rank=2 chr12 . exon 705383 705481 . - . ID=Thaps36995.2;Parent=Thaps36995;constitutive=1;rank=2 chr12 . CDS 705641 705820 . - 0 ID=Thaps36995;Parent=Thaps36995;rank=1 chr12 . exon 705641 705820 . - . ID=Thaps36995.1;Parent=Thaps36995;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 706741 707967 . - . ID=Thaps9161;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAJ1];external_name=Thaps9161;logic_name=jgi_thaps3 chr12 ensembl transcript 706741 707967 . - . ID=Thaps9161;Parent=Thaps9161;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 706741 707967 . - 0 ID=Thaps9161;Parent=Thaps9161;rank=1 chr12 . exon 706741 707967 . - . ID=Thaps9161.1;Parent=Thaps9161;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 708617 711333 . - . ID=Thaps9162;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAJ2];external_name=Thaps9162;logic_name=jgi_thaps3 chr12 ensembl transcript 708617 711333 . - . ID=Thaps9162;Parent=Thaps9162;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 708617 709183 . - 0 ID=Thaps9162;Parent=Thaps9162;rank=2 chr12 . exon 708617 709183 . - . ID=Thaps9162.2;Parent=Thaps9162;constitutive=1;rank=2 chr12 . CDS 709270 711333 . - 0 ID=Thaps9162;Parent=Thaps9162;rank=1 chr12 . repeat_region 710138 710178 . ? . description=trf chr12 . repeat_region 715338 715365 . ? . description=trf chr12 ensembl protein_coding_gene 715414 716927 . + . ID=Thaps24527;biotype=protein_coding;description=RuvB dna-helicase [Source:UniProtKB/TrEMBL%3BAcc:B8CAJ4];external_name=Thaps24527;logic_name=jgi_thaps3 chr12 ensembl transcript 715414 716927 . + . ID=Thaps24527;Parent=Thaps24527;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 715414 715419 . + 0 ID=Thaps24527;Parent=Thaps24527;rank=1 chr12 . exon 715414 715419 . + . ID=Thaps24527.1;Parent=Thaps24527;constitutive=1;rank=1 chr12 . CDS 715566 716927 . + 0 ID=Thaps24527;Parent=Thaps24527;rank=2 chr12 . exon 715566 716927 . + . ID=Thaps24527.2;Parent=Thaps24527;constitutive=1;rank=2 chr12 . exon 709270 711333 . - . ID=Thaps9162.1;Parent=Thaps9162;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 712459 714750 . + . ID=Thaps9163;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAJ3];external_name=Thaps9163;logic_name=jgi_thaps3 chr12 ensembl transcript 712459 714750 . + . ID=Thaps9163;Parent=Thaps9163;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 712459 713197 . + 0 ID=Thaps9163;Parent=Thaps9163;rank=1 chr12 . exon 712459 713197 . + . ID=Thaps9163.1;Parent=Thaps9163;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 713324 714750 . + 0 ID=Thaps9163;Parent=Thaps9163;rank=2 chr12 . exon 713324 714750 . + . ID=Thaps9163.2;Parent=Thaps9163;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 717137 719266 . - . ID=Thaps9166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAJ5];external_name=Thaps9166;logic_name=jgi_thaps3 chr12 ensembl transcript 717137 719266 . - . ID=Thaps9166;Parent=Thaps9166;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 717137 719266 . - 0 ID=Thaps9166;Parent=Thaps9166;rank=1 chr12 . exon 717137 719266 . - . ID=Thaps9166.1;Parent=Thaps9166;constitutive=1;rank=1 chr12 . repeat_region 727307 727342 . ? . description=dust chr12 . repeat_region 727705 727729 . ? . description=dust chr12 ensembl protein_coding_gene 723602 726544 . - . ID=Thaps24529;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAJ8];external_name=Thaps24529;logic_name=jgi_thaps3 chr12 ensembl transcript 723602 726544 . - . ID=Thaps24529;Parent=Thaps24529;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 723602 725446 . - 0 ID=Thaps24529;Parent=Thaps24529;rank=2 chr12 . exon 723602 725446 . - . ID=Thaps24529.2;Parent=Thaps24529;constitutive=1;rank=2 chr12 . CDS 725534 726544 . - 0 ID=Thaps24529;Parent=Thaps24529;rank=1 chr12 . exon 725534 726544 . - . ID=Thaps24529.1;Parent=Thaps24529;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 719510 721699 . + . ID=Thaps9167;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAJ6];external_name=Thaps9167;logic_name=jgi_thaps3 chr12 ensembl transcript 719510 721699 . + . ID=Thaps9167;Parent=Thaps9167;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 719510 721699 . + 0 ID=Thaps9167;Parent=Thaps9167;rank=1 chr12 . exon 719510 721699 . + . ID=Thaps9167.1;Parent=Thaps9167;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 721999 723431 . + . ID=Thaps9168;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAJ7];external_name=Thaps9168;logic_name=jgi_thaps3 chr12 ensembl transcript 721999 723431 . + . ID=Thaps9168;Parent=Thaps9168;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 721999 723361 . + 0 ID=Thaps9168;Parent=Thaps9168;rank=1 chr12 . exon 721999 723361 . + . ID=Thaps9168.1;Parent=Thaps9168;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 723424 723431 . + 0 ID=Thaps9168;Parent=Thaps9168;rank=2 chr12 . exon 723424 723431 . + . ID=Thaps9168.2;Parent=Thaps9168;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 728816 729151 . + . ID=Thaps9170;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAJ9];external_name=Thaps9170;logic_name=jgi_thaps3 chr12 ensembl transcript 728816 729151 . + . ID=Thaps9170;Parent=Thaps9170;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 728816 729151 . + 0 ID=Thaps9170;Parent=Thaps9170;rank=1 chr12 . exon 728816 729151 . + . ID=Thaps9170.1;Parent=Thaps9170;constitutive=1;rank=1 chr12 . repeat_region 729298 729417 . ? . description=trf chr12 . repeat_region 734550 734575 . ? . description=trf chr12 ensembl protein_coding_gene 733304 737799 . + . ID=Thaps24530;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK1];external_name=Thaps24530;logic_name=jgi_thaps3 chr12 ensembl transcript 733304 737799 . + . ID=Thaps24530;Parent=Thaps24530;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 733304 734184 . + 0 ID=Thaps24530;Parent=Thaps24530;rank=1 chr12 . exon 733304 734184 . + . ID=Thaps24530.1;Parent=Thaps24530;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 734273 734474 . + 0 ID=Thaps24530;Parent=Thaps24530;rank=2 chr12 . exon 734273 734474 . + . ID=Thaps24530.2;Parent=Thaps24530;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 734580 735706 . + 0 ID=Thaps24530;Parent=Thaps24530;rank=3 chr12 . exon 734580 735706 . + . ID=Thaps24530.3;Parent=Thaps24530;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 735795 736077 . + 0 ID=Thaps24530;Parent=Thaps24530;rank=4 chr12 . exon 735795 736077 . + . ID=Thaps24530.4;Parent=Thaps24530;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 736171 737799 . + 0 ID=Thaps24530;Parent=Thaps24530;rank=5 chr12 . exon 736171 737799 . + . ID=Thaps24530.5;Parent=Thaps24530;constitutive=1;rank=5 chr12 ensembl protein_coding_gene 730116 730946 . - . ID=Thaps36947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK0];external_name=Thaps36947;logic_name=jgi_thaps3 chr12 ensembl transcript 730116 730946 . - . ID=Thaps36947;Parent=Thaps36947;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 730116 730946 . - 0 ID=Thaps36947;Parent=Thaps36947;rank=1 chr12 . exon 730116 730946 . - . ID=Thaps36947.1;Parent=Thaps36947;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 737962 740601 . - . ID=Thaps9173;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK2];external_name=Thaps9173;logic_name=jgi_thaps3 chr12 ensembl transcript 737962 740601 . - . ID=Thaps9173;Parent=Thaps9173;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 737962 740601 . - 0 ID=Thaps9173;Parent=Thaps9173;rank=1 chr12 . exon 737962 740601 . - . ID=Thaps9173.1;Parent=Thaps9173;constitutive=1;rank=1 chr12 . repeat_region 740750 740758 . ? . description=dust chr12 . repeat_region 741501 741565 . + . description=Gypsy1I_TP chr12 . repeat_region 741588 741842 . - . description=Gypsy1I_TP chr12 . repeat_region 742033 742087 . ? . description=dust chr12 ensembl protein_coding_gene 743563 744849 . + . ID=Thaps9174;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK3];external_name=Thaps9174;logic_name=jgi_thaps3 chr12 ensembl transcript 743563 744849 . + . ID=Thaps9174;Parent=Thaps9174;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 743563 744849 . + 0 ID=Thaps9174;Parent=Thaps9174;rank=1 chr12 . exon 743563 744849 . + . ID=Thaps9174.1;Parent=Thaps9174;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 745730 749862 . - . ID=Thaps9175;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK4];external_name=Thaps9175;logic_name=jgi_thaps3 chr12 ensembl transcript 745730 749862 . - . ID=Thaps9175;Parent=Thaps9175;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 745730 746449 . - 0 ID=Thaps9175;Parent=Thaps9175;rank=4 chr12 . exon 745730 746449 . - . ID=Thaps9175.4;Parent=Thaps9175;constitutive=1;rank=4 chr12 . CDS 746530 746629 . - 0 ID=Thaps9175;Parent=Thaps9175;rank=3 chr12 . exon 746530 746629 . - . ID=Thaps9175.3;Parent=Thaps9175;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 746704 748706 . - 0 ID=Thaps9175;Parent=Thaps9175;rank=2 chr12 . exon 746704 748706 . - . ID=Thaps9175.2;Parent=Thaps9175;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 748786 749862 . - 0 ID=Thaps9175;Parent=Thaps9175;rank=1 chr12 . exon 748786 749862 . - . ID=Thaps9175.1;Parent=Thaps9175;constitutive=1;rank=1 chr12 . repeat_region 751812 751847 . ? . description=trf chr12 . repeat_region 751812 751858 . ? . description=trf chr12 . repeat_region 751964 752004 . ? . description=trf chr12 ensembl protein_coding_gene 753400 753687 . - . ID=Thaps36958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK6];external_name=Thaps36958;logic_name=jgi_thaps3 chr12 ensembl transcript 753400 753687 . - . ID=Thaps36958;Parent=Thaps36958;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 753400 753687 . - 0 ID=Thaps36958;Parent=Thaps36958;rank=1 chr12 . exon 753400 753687 . - . ID=Thaps36958.1;Parent=Thaps36958;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 751017 752153 . - . ID=Thaps36971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK5];external_name=Thaps36971;logic_name=jgi_thaps3 chr12 ensembl transcript 751017 752153 . - . ID=Thaps36971;Parent=Thaps36971;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 751017 752153 . - 0 ID=Thaps36971;Parent=Thaps36971;rank=1 chr12 . exon 751017 752153 . - . ID=Thaps36971.1;Parent=Thaps36971;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 755434 757083 . - . ID=Thaps42133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK7];external_name=Thaps42133;logic_name=jgi_thaps3 chr12 ensembl transcript 755434 757083 . - . ID=Thaps42133;Parent=Thaps42133;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 755434 757083 . - 0 ID=Thaps42133;Parent=Thaps42133;rank=1 chr12 . exon 755434 757083 . - . ID=Thaps42133.1;Parent=Thaps42133;constitutive=1;rank=1 chr12 . repeat_region 759912 759931 . ? . description=dust chr12 ensembl protein_coding_gene 771524 772753 . + . ID=Thaps24534;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK8];external_name=Thaps24534;logic_name=jgi_thaps3 chr12 ensembl transcript 771524 772753 . + . ID=Thaps24534;Parent=Thaps24534;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 771524 772753 . + 0 ID=Thaps24534;Parent=Thaps24534;rank=1 chr12 . exon 771524 772753 . + . ID=Thaps24534.1;Parent=Thaps24534;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 778218 781491 . + . ID=Thaps24535;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAL0];external_name=Thaps24535;logic_name=jgi_thaps3 chr12 ensembl transcript 778218 781491 . + . ID=Thaps24535;Parent=Thaps24535;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 778218 780452 . + 0 ID=Thaps24535;Parent=Thaps24535;rank=1 chr12 . exon 778218 780452 . + . ID=Thaps24535.1;Parent=Thaps24535;constitutive=1;rank=1 chr12 . CDS 780550 781491 . + 0 ID=Thaps24535;Parent=Thaps24535;rank=2 chr12 ensembl protein_coding_gene 773562 777602 . - . ID=Thaps9180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAK9];external_name=Thaps9180;logic_name=jgi_thaps3 chr12 ensembl transcript 773562 777602 . - . ID=Thaps9180;Parent=Thaps9180;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 773562 774695 . - 0 ID=Thaps9180;Parent=Thaps9180;rank=2 chr12 . exon 773562 774695 . - . ID=Thaps9180.2;Parent=Thaps9180;constitutive=1;rank=2 chr12 . CDS 774792 777602 . - 0 ID=Thaps9180;Parent=Thaps9180;rank=1 chr12 . exon 774792 777602 . - . ID=Thaps9180.1;Parent=Thaps9180;constitutive=1;rank=1 chr12 . repeat_region 784065 784103 . ? . description=trf chr12 . repeat_region 784065 784103 . ? . description=dust chr12 . repeat_region 784070 784110 . ? . description=trf chr12 . exon 780550 781491 . + . ID=Thaps24535.2;Parent=Thaps24535;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 785410 789444 . - . ID=Thaps269633;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAL1];external_name=Thaps269633;logic_name=jgi_thaps3 chr12 ensembl transcript 785410 789444 . - . ID=Thaps269633;Parent=Thaps269633;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 785410 785546 . - 0 ID=Thaps269633;Parent=Thaps269633;rank=4 chr12 . exon 785410 785546 . - . ID=Thaps269633.4;Parent=Thaps269633;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 787391 787575 . - 0 ID=Thaps269633;Parent=Thaps269633;rank=3 chr12 . exon 787391 787575 . - . ID=Thaps269633.3;Parent=Thaps269633;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 787576 788377 . - 0 ID=Thaps269633;Parent=Thaps269633;rank=2 chr12 . exon 787576 788377 . - . ID=Thaps269633.2;Parent=Thaps269633;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 789345 789444 . - 0 ID=Thaps269633;Parent=Thaps269633;rank=1 chr12 ensembl protein_coding_gene 790558 792036 . + . ID=Thaps24537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAL2];external_name=Thaps24537;logic_name=jgi_thaps3 chr12 ensembl transcript 790558 792036 . + . ID=Thaps24537;Parent=Thaps24537;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 790558 792036 . + 0 ID=Thaps24537;Parent=Thaps24537;rank=1 chr12 . exon 790558 792036 . + . ID=Thaps24537.1;Parent=Thaps24537;constitutive=1;rank=1 chr12 . exon 789345 789444 . - . ID=Thaps269633.1;Parent=Thaps269633;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 794481 795356 . + . ID=Thaps36964;biotype=protein_coding;description=Nicotinate-nucleotide pyrophosphorylase [Source:UniProtKB/TrEMBL%3BAcc:B8CAL4];external_name=Thaps36964;logic_name=jgi_thaps3 chr12 ensembl transcript 794481 795356 . + . ID=Thaps36964;Parent=Thaps36964;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 794481 795356 . + 0 ID=Thaps36964;Parent=Thaps36964;rank=1 chr12 . exon 794481 795356 . + . ID=Thaps36964.1;Parent=Thaps36964;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 792171 793616 . - . ID=Thaps9184;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAL3];external_name=Thaps9184;logic_name=jgi_thaps3 chr12 ensembl transcript 792171 793616 . - . ID=Thaps9184;Parent=Thaps9184;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 792171 793616 . - 0 ID=Thaps9184;Parent=Thaps9184;rank=1 chr12 . exon 792171 793616 . - . ID=Thaps9184.1;Parent=Thaps9184;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 795840 797415 . + . ID=Thaps9186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAL5];external_name=Thaps9186;logic_name=jgi_thaps3 chr12 ensembl transcript 795840 797415 . + . ID=Thaps9186;Parent=Thaps9186;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 795840 796388 . + 0 ID=Thaps9186;Parent=Thaps9186;rank=1 chr12 . exon 795840 796388 . + . ID=Thaps9186.1;Parent=Thaps9186;constitutive=1;rank=1 chr12 . CDS 796444 797415 . + 0 ID=Thaps9186;Parent=Thaps9186;rank=2 chr12 . exon 796444 797415 . + . ID=Thaps9186.2;Parent=Thaps9186;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 798257 800241 . + . ID=Thaps9187;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAL6];external_name=Thaps9187;logic_name=jgi_thaps3 chr12 ensembl transcript 798257 800241 . + . ID=Thaps9187;Parent=Thaps9187;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 798257 799263 . + 0 ID=Thaps9187;Parent=Thaps9187;rank=1 chr12 . exon 798257 799263 . + . ID=Thaps9187.1;Parent=Thaps9187;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 799419 800241 . + 0 ID=Thaps9187;Parent=Thaps9187;rank=2 chr12 . repeat_region 802002 802017 . ? . description=dust chr12 . repeat_region 802940 802973 . ? . description=dust chr12 ensembl protein_coding_gene 800328 802316 . - . ID=Thaps24538;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAL7];external_name=Thaps24538;logic_name=jgi_thaps3 chr12 ensembl transcript 800328 802316 . - . ID=Thaps24538;Parent=Thaps24538;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 800328 801995 . - 0 ID=Thaps24538;Parent=Thaps24538;rank=2 chr12 . exon 800328 801995 . - . ID=Thaps24538.2;Parent=Thaps24538;constitutive=1;rank=2 chr12 . CDS 802164 802316 . - 0 ID=Thaps24538;Parent=Thaps24538;rank=1 chr12 . exon 802164 802316 . - . ID=Thaps24538.1;Parent=Thaps24538;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 808231 810212 . + . ID=Thaps24540;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAM1];external_name=Thaps24540;logic_name=jgi_thaps3 chr12 ensembl transcript 808231 810212 . + . ID=Thaps24540;Parent=Thaps24540;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 808231 809917 . + 0 ID=Thaps24540;Parent=Thaps24540;rank=1 chr12 . exon 808231 809917 . + . ID=Thaps24540.1;Parent=Thaps24540;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 809995 810212 . + 0 ID=Thaps24540;Parent=Thaps24540;rank=2 chr12 ensembl protein_coding_gene 804902 805452 . + . ID=Thaps36884;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAL9];external_name=Thaps36884;logic_name=jgi_thaps3 chr12 ensembl transcript 804902 805452 . + . ID=Thaps36884;Parent=Thaps36884;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 804902 805062 . + 0 ID=Thaps36884;Parent=Thaps36884;rank=1 chr12 . exon 804902 805062 . + . ID=Thaps36884.1;Parent=Thaps36884;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 805164 805452 . + 0 ID=Thaps36884;Parent=Thaps36884;rank=2 chr12 . exon 805164 805452 . + . ID=Thaps36884.2;Parent=Thaps36884;constitutive=1;ensembl_end_phase=1;rank=2 chr12 ensembl protein_coding_gene 805629 807134 . - . ID=Thaps36917;biotype=protein_coding;description=Queuine tRNA-ribosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8CAM0];external_name=Thaps36917;logic_name=jgi_thaps3 chr12 ensembl transcript 805629 807134 . - . ID=Thaps36917;Parent=Thaps36917;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 805629 806007 . - 0 ID=Thaps36917;Parent=Thaps36917;rank=4 chr12 . exon 805629 806007 . - . ID=Thaps36917.4;Parent=Thaps36917;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 806050 806768 . - 0 ID=Thaps36917;Parent=Thaps36917;rank=3 chr12 . exon 806050 806768 . - . ID=Thaps36917.3;Parent=Thaps36917;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 806878 806898 . - 0 ID=Thaps36917;Parent=Thaps36917;rank=2 chr12 . exon 806878 806898 . - . ID=Thaps36917.2;Parent=Thaps36917;constitutive=1;rank=2 chr12 . CDS 806997 807134 . - 0 ID=Thaps36917;Parent=Thaps36917;rank=1 chr12 . exon 806997 807134 . - . ID=Thaps36917.1;Parent=Thaps36917;constitutive=1;rank=1 chr12 . exon 799419 800241 . + . ID=Thaps9187.2;Parent=Thaps9187;constitutive=1;ensembl_end_phase=1;rank=2 chr12 ensembl protein_coding_gene 802933 804150 . - . ID=Thaps9189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAL8];external_name=Thaps9189;logic_name=jgi_thaps3 chr12 ensembl transcript 802933 804150 . - . ID=Thaps9189;Parent=Thaps9189;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 802933 804150 . - 0 ID=Thaps9189;Parent=Thaps9189;rank=1 chr12 . exon 802933 804150 . - . ID=Thaps9189.1;Parent=Thaps9189;constitutive=1;rank=1 chr12 . repeat_region 818590 818635 . ? . description=trf chr12 . exon 809995 810212 . + . ID=Thaps24540.2;Parent=Thaps24540;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 812702 813202 . + . ID=Thaps263924;biotype=protein_coding;description=Transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CAM2];external_name=Thaps263924;logic_name=jgi_thaps3 chr12 ensembl transcript 812702 813202 . + . ID=Thaps263924;Parent=Thaps263924;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 812702 813202 . + 0 ID=Thaps263924;Parent=Thaps263924;rank=1 chr12 . exon 812702 813202 . + . ID=Thaps263924.1;Parent=Thaps263924;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 814281 819376 . - . ID=Thaps9195;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAM3];external_name=Thaps9195;logic_name=jgi_thaps3 chr12 ensembl transcript 814281 819376 . - . ID=Thaps9195;Parent=Thaps9195;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 814281 814792 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=11 chr12 . exon 814281 814792 . - . ID=Thaps9195.11;Parent=Thaps9195;constitutive=1;ensembl_end_phase=2;rank=11 chr12 . CDS 814875 815026 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=10 chr12 . exon 814875 815026 . - . ID=Thaps9195.10;Parent=Thaps9195;constitutive=1;ensembl_end_phase=2;rank=10 chr12 . CDS 815110 815492 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=9 chr12 . exon 815110 815492 . - . ID=Thaps9195.9;Parent=Thaps9195;constitutive=1;ensembl_end_phase=2;rank=9 chr12 . CDS 815578 815778 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=8 chr12 . exon 815578 815778 . - . ID=Thaps9195.8;Parent=Thaps9195;constitutive=1;rank=8 chr12 . CDS 815855 816202 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=7 chr12 . exon 815855 816202 . - . ID=Thaps9195.7;Parent=Thaps9195;constitutive=1;rank=7 chr12 . CDS 816286 816489 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=6 chr12 . exon 816286 816489 . - . ID=Thaps9195.6;Parent=Thaps9195;constitutive=1;rank=6 chr12 . CDS 816584 816754 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=5 chr12 . exon 816584 816754 . - . ID=Thaps9195.5;Parent=Thaps9195;constitutive=1;rank=5 chr12 . CDS 816861 817307 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=4 chr12 . exon 816861 817307 . - . ID=Thaps9195.4;Parent=Thaps9195;constitutive=1;rank=4 chr12 . CDS 817398 817587 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=3 chr12 . exon 817398 817587 . - . ID=Thaps9195.3;Parent=Thaps9195;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 817680 818177 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=2 chr12 . exon 817680 818177 . - . ID=Thaps9195.2;Parent=Thaps9195;constitutive=1;rank=2 chr12 . CDS 818271 819376 . - 0 ID=Thaps9195;Parent=Thaps9195;rank=1 chr12 . exon 818271 819376 . - . ID=Thaps9195.1;Parent=Thaps9195;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . repeat_region 827039 827046 . ? . description=dust chr12 ensembl protein_coding_gene 821522 824079 . - . ID=Thaps24542;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAM4];external_name=Thaps24542;logic_name=jgi_thaps3 chr12 ensembl transcript 821522 824079 . - . ID=Thaps24542;Parent=Thaps24542;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 821522 822555 . - 0 ID=Thaps24542;Parent=Thaps24542;rank=2 chr12 . exon 821522 822555 . - . ID=Thaps24542.2;Parent=Thaps24542;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 822633 824079 . - 0 ID=Thaps24542;Parent=Thaps24542;rank=1 chr12 . exon 822633 824079 . - . ID=Thaps24542.1;Parent=Thaps24542;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 825767 827526 . + . ID=Thaps263925;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAM5];external_name=Thaps263925;logic_name=jgi_thaps3 chr12 ensembl transcript 825767 827526 . + . ID=Thaps263925;Parent=Thaps263925;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 825767 825837 . + 0 ID=Thaps263925;Parent=Thaps263925;rank=1 chr12 . exon 825767 825837 . + . ID=Thaps263925.1;Parent=Thaps263925;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 826008 826187 . + 0 ID=Thaps263925;Parent=Thaps263925;rank=2 chr12 . exon 826008 826187 . + . ID=Thaps263925.2;Parent=Thaps263925;constitutive=1;rank=2 chr12 . CDS 826362 826703 . + 0 ID=Thaps263925;Parent=Thaps263925;rank=3 chr12 . exon 826362 826703 . + . ID=Thaps263925.3;Parent=Thaps263925;constitutive=1;rank=3 chr12 . CDS 826800 827526 . + 0 ID=Thaps263925;Parent=Thaps263925;rank=4 chr12 . exon 826800 827526 . + . ID=Thaps263925.4;Parent=Thaps263925;constitutive=1;ensembl_end_phase=1;rank=4 chr12 ensembl protein_coding_gene 836126 840768 . + . ID=Thaps24544;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAM8];external_name=Thaps24544;logic_name=jgi_thaps3 chr12 ensembl transcript 836126 840768 . + . ID=Thaps24544;Parent=Thaps24544;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 836126 836289 . + 0 ID=Thaps24544;Parent=Thaps24544;rank=1 chr12 . exon 836126 836289 . + . ID=Thaps24544.1;Parent=Thaps24544;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 836421 840205 . + 0 ID=Thaps24544;Parent=Thaps24544;rank=2 chr12 . exon 836421 840205 . + . ID=Thaps24544.2;Parent=Thaps24544;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 840365 840768 . + 0 ID=Thaps24544;Parent=Thaps24544;rank=3 chr12 ensembl protein_coding_gene 829455 831760 . - . ID=Thaps36937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAM6];external_name=Thaps36937;logic_name=jgi_thaps3 chr12 ensembl transcript 829455 831760 . - . ID=Thaps36937;Parent=Thaps36937;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 829455 829781 . - 0 ID=Thaps36937;Parent=Thaps36937;rank=8 chr12 . exon 829455 829781 . - . ID=Thaps36937.8;Parent=Thaps36937;constitutive=1;rank=8 chr12 . CDS 829864 829928 . - 0 ID=Thaps36937;Parent=Thaps36937;rank=7 chr12 . exon 829864 829928 . - . ID=Thaps36937.7;Parent=Thaps36937;constitutive=1;ensembl_end_phase=2;rank=7 chr12 . CDS 830020 830309 . - 0 ID=Thaps36937;Parent=Thaps36937;rank=6 chr12 . exon 830020 830309 . - . ID=Thaps36937.6;Parent=Thaps36937;constitutive=1;ensembl_end_phase=2;rank=6 chr12 . CDS 830393 830520 . - 0 ID=Thaps36937;Parent=Thaps36937;rank=5 chr12 . exon 830393 830520 . - . ID=Thaps36937.5;Parent=Thaps36937;constitutive=1;ensembl_end_phase=2;rank=5 chr12 . CDS 830587 830902 . - 0 ID=Thaps36937;Parent=Thaps36937;rank=4 chr12 . exon 830587 830902 . - . ID=Thaps36937.4;Parent=Thaps36937;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 831028 831160 . - 0 ID=Thaps36937;Parent=Thaps36937;rank=3 chr12 . exon 831028 831160 . - . ID=Thaps36937.3;Parent=Thaps36937;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 831209 831314 . - 0 ID=Thaps36937;Parent=Thaps36937;rank=2 chr12 . exon 831209 831314 . - . ID=Thaps36937.2;Parent=Thaps36937;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 831410 831760 . - 0 ID=Thaps36937;Parent=Thaps36937;rank=1 chr12 . exon 831410 831760 . - . ID=Thaps36937.1;Parent=Thaps36937;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 834007 835615 . - . ID=Thaps9199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAM7];external_name=Thaps9199;logic_name=jgi_thaps3 chr12 ensembl transcript 834007 835615 . - . ID=Thaps9199;Parent=Thaps9199;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 834007 834360 . - 0 ID=Thaps9199;Parent=Thaps9199;rank=2 chr12 . exon 834007 834360 . - . ID=Thaps9199.2;Parent=Thaps9199;constitutive=1;rank=2 chr12 . CDS 834446 835615 . - 0 ID=Thaps9199;Parent=Thaps9199;rank=1 chr12 . exon 834446 835615 . - . ID=Thaps9199.1;Parent=Thaps9199;constitutive=1;rank=1 chr12 . repeat_region 839257 839334 . ? . description=trf chr12 . repeat_region 843452 843496 . ? . description=trf chr12 . exon 840365 840768 . + . ID=Thaps24544.3;Parent=Thaps24544;constitutive=1;ensembl_end_phase=2;rank=3 chr12 ensembl protein_coding_gene 845569 846675 . - . ID=Thaps24545;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAN2];external_name=Thaps24545;logic_name=jgi_thaps3 chr12 ensembl transcript 845569 846675 . - . ID=Thaps24545;Parent=Thaps24545;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 845569 846004 . - 0 ID=Thaps24545;Parent=Thaps24545;rank=2 chr12 . exon 845569 846004 . - . ID=Thaps24545.2;Parent=Thaps24545;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 846107 846675 . - 0 ID=Thaps24545;Parent=Thaps24545;rank=1 chr12 . exon 846107 846675 . - . ID=Thaps24545.1;Parent=Thaps24545;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 842182 842997 . - . ID=Thaps263928;biotype=protein_coding;description=Vascular plant-like receptor protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8CAN0];external_name=Thaps263928;logic_name=jgi_thaps3 chr12 ensembl transcript 842182 842997 . - . ID=Thaps263928;Parent=Thaps263928;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 842182 842997 . - 0 ID=Thaps263928;Parent=Thaps263928;rank=1 chr12 . exon 842182 842997 . - . ID=Thaps263928.1;Parent=Thaps263928;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 848229 848944 . - . ID=Thaps263929;biotype=protein_coding;description=Transporter [Source:UniProtKB/TrEMBL%3BAcc:B8CAN3];external_name=Thaps263929;logic_name=jgi_thaps3 chr12 ensembl transcript 848229 848944 . - . ID=Thaps263929;Parent=Thaps263929;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 848229 848436 . - 0 ID=Thaps263929;Parent=Thaps263929;rank=2 chr12 . exon 848229 848436 . - . ID=Thaps263929.2;Parent=Thaps263929;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 848473 848944 . - 0 ID=Thaps263929;Parent=Thaps263929;rank=1 chr12 . exon 848473 848944 . - . ID=Thaps263929.1;Parent=Thaps263929;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 841501 841713 . - . ID=Thaps36988;biotype=protein_coding;description=Ubiquitin like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAM9];external_name=Thaps36988;logic_name=jgi_thaps3 chr12 ensembl transcript 841501 841713 . - . ID=Thaps36988;Parent=Thaps36988;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 841501 841713 . - 0 ID=Thaps36988;Parent=Thaps36988;rank=1 chr12 . exon 841501 841713 . - . ID=Thaps36988.1;Parent=Thaps36988;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 843689 844514 . + . ID=Thaps9203;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAN1];external_name=Thaps9203;logic_name=jgi_thaps3 chr12 ensembl transcript 843689 844514 . + . ID=Thaps9203;Parent=Thaps9203;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 843689 843831 . + 0 ID=Thaps9203;Parent=Thaps9203;rank=1 chr12 . exon 843689 843831 . + . ID=Thaps9203.1;Parent=Thaps9203;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 844095 844360 . + 0 ID=Thaps9203;Parent=Thaps9203;rank=2 chr12 . exon 844095 844360 . + . ID=Thaps9203.2;Parent=Thaps9203;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 844474 844514 . + 0 ID=Thaps9203;Parent=Thaps9203;rank=3 chr12 . exon 844474 844514 . + . ID=Thaps9203.3;Parent=Thaps9203;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . repeat_region 854979 855031 . - . description=Copia6LTR_TP chr12 . repeat_region 855604 855664 . ? . description=dust chr12 . repeat_region 855604 855705 . - . description=Harbinger2N_TP chr12 ensembl protein_coding_gene 854007 854587 . - . ID=Thaps24546;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAN6];external_name=Thaps24546;logic_name=jgi_thaps3 chr12 ensembl transcript 854007 854587 . - . ID=Thaps24546;Parent=Thaps24546;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 854007 854249 . - 0 ID=Thaps24546;Parent=Thaps24546;rank=2 chr12 . exon 854007 854249 . - . ID=Thaps24546.2;Parent=Thaps24546;constitutive=1;rank=2 chr12 . CDS 854390 854587 . - 0 ID=Thaps24546;Parent=Thaps24546;rank=1 chr12 . exon 854390 854587 . - . ID=Thaps24546.1;Parent=Thaps24546;constitutive=1;rank=1 chr12 ensembl gene 855515 856885 . + . ID=Thaps263930;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr12 ensembl transcript 855515 856885 . + . ID=Thaps263930;Parent=Thaps263930;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr12 . exon 855515 855554 . + . ID=Thaps263930.1;Parent=Thaps263930;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . exon 855693 855842 . + . ID=Thaps263930.2;Parent=Thaps263930;constitutive=1;rank=2 chr12 . exon 856017 856216 . + . ID=Thaps263930.3;Parent=Thaps263930;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . exon 856368 856885 . + . ID=Thaps263930.4;Parent=Thaps263930;constitutive=1;ensembl_end_phase=2;rank=4 chr12 ensembl protein_coding_gene 849792 851029 . + . ID=Thaps9206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAN4];external_name=Thaps9206;logic_name=jgi_thaps3 chr12 ensembl transcript 849792 851029 . + . ID=Thaps9206;Parent=Thaps9206;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 849792 850964 . + 0 ID=Thaps9206;Parent=Thaps9206;rank=1 chr12 . exon 849792 850964 . + . ID=Thaps9206.1;Parent=Thaps9206;constitutive=1;rank=1 chr12 . CDS 851009 851029 . + 0 ID=Thaps9206;Parent=Thaps9206;rank=2 chr12 . exon 851009 851029 . + . ID=Thaps9206.2;Parent=Thaps9206;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 851427 851861 . - . ID=Thaps9207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAN5];external_name=Thaps9207;logic_name=jgi_thaps3 chr12 ensembl transcript 851427 851861 . - . ID=Thaps9207;Parent=Thaps9207;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 851427 851861 . - 0 ID=Thaps9207;Parent=Thaps9207;rank=1 chr12 . exon 851427 851861 . - . ID=Thaps9207.1;Parent=Thaps9207;constitutive=1;rank=1 chr12 . repeat_region 862830 862864 . ? . description=trf chr12 . repeat_region 864304 864323 . ? . description=trf chr12 . repeat_region 864571 864599 . ? . description=trf chr12 ensembl protein_coding_gene 860551 861687 . + . ID=Thaps24548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAN8];external_name=Thaps24548;logic_name=jgi_thaps3 chr12 ensembl transcript 860551 861687 . + . ID=Thaps24548;Parent=Thaps24548;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 860551 861687 . + 0 ID=Thaps24548;Parent=Thaps24548;rank=1 chr12 . exon 860551 861687 . + . ID=Thaps24548.1;Parent=Thaps24548;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 864126 867221 . + . ID=Thaps24549;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAN9];external_name=Thaps24549;logic_name=jgi_thaps3 chr12 ensembl transcript 864126 867221 . + . ID=Thaps24549;Parent=Thaps24549;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 864126 865850 . + 0 ID=Thaps24549;Parent=Thaps24549;rank=1 chr12 . exon 864126 865850 . + . ID=Thaps24549.1;Parent=Thaps24549;constitutive=1;rank=1 chr12 . CDS 865938 866374 . + 0 ID=Thaps24549;Parent=Thaps24549;rank=2 chr12 . exon 865938 866374 . + . ID=Thaps24549.2;Parent=Thaps24549;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 866461 866638 . + 0 ID=Thaps24549;Parent=Thaps24549;rank=3 chr12 . exon 866461 866638 . + . ID=Thaps24549.3;Parent=Thaps24549;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 866715 867221 . + 0 ID=Thaps24549;Parent=Thaps24549;rank=4 chr12 . exon 866715 867221 . + . ID=Thaps24549.4;Parent=Thaps24549;constitutive=1;rank=4 chr12 ensembl protein_coding_gene 867297 870190 . - . ID=Thaps24550;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP0];external_name=Thaps24550;logic_name=jgi_thaps3 chr12 ensembl transcript 867297 870190 . - . ID=Thaps24550;Parent=Thaps24550;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 867297 868874 . - 0 ID=Thaps24550;Parent=Thaps24550;rank=3 chr12 . exon 867297 868874 . - . ID=Thaps24550.3;Parent=Thaps24550;constitutive=1;rank=3 chr12 . CDS 868986 869898 . - 0 ID=Thaps24550;Parent=Thaps24550;rank=2 chr12 . CDS 870096 870190 . - 0 ID=Thaps24550;Parent=Thaps24550;rank=1 chr12 ensembl protein_coding_gene 859169 860027 . - . ID=Thaps263931;biotype=protein_coding;description=Ubiquitin carboxyl terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8CAN7];external_name=Thaps263931;logic_name=jgi_thaps3 chr12 ensembl transcript 859169 860027 . - . ID=Thaps263931;Parent=Thaps263931;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 859169 859577 . - 0 ID=Thaps263931;Parent=Thaps263931;rank=3 chr12 . exon 859169 859577 . - . ID=Thaps263931.3;Parent=Thaps263931;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 859715 859780 . - 0 ID=Thaps263931;Parent=Thaps263931;rank=2 chr12 . exon 859715 859780 . - . ID=Thaps263931.2;Parent=Thaps263931;constitutive=1;rank=2 chr12 . CDS 859805 860027 . - 0 ID=Thaps263931;Parent=Thaps263931;rank=1 chr12 . exon 859805 860027 . - . ID=Thaps263931.1;Parent=Thaps263931;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . repeat_region 870018 870091 . ? . description=dust chr12 ensembl protein_coding_gene 875718 877457 . + . ID=Thaps13343;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP2];external_name=Thaps13343;logic_name=jgi_thaps3 chr12 ensembl transcript 875718 877457 . + . ID=Thaps13343;Parent=Thaps13343;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 875718 875949 . + 0 ID=Thaps13343;Parent=Thaps13343;rank=1 chr12 . exon 875718 875949 . + . ID=Thaps13343.1;Parent=Thaps13343;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 876067 876558 . + 0 ID=Thaps13343;Parent=Thaps13343;rank=2 chr12 . exon 876067 876558 . + . ID=Thaps13343.2;Parent=Thaps13343;constitutive=1;rank=2 chr12 . CDS 876712 877457 . + 0 ID=Thaps13343;Parent=Thaps13343;rank=3 chr12 . exon 876712 877457 . + . ID=Thaps13343.3;Parent=Thaps13343;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . exon 868986 869898 . - . ID=Thaps24550.2;Parent=Thaps24550;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 870096 870190 . - . ID=Thaps24550.1;Parent=Thaps24550;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 877796 878832 . - . ID=Thaps36927;biotype=protein_coding;description=Cell division control protein 2-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP3];external_name=Thaps36927;logic_name=jgi_thaps3 chr12 ensembl transcript 877796 878832 . - . ID=Thaps36927;Parent=Thaps36927;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 877796 878284 . - 0 ID=Thaps36927;Parent=Thaps36927;rank=2 chr12 . exon 877796 878284 . - . ID=Thaps36927.2;Parent=Thaps36927;constitutive=1;rank=2 chr12 . CDS 878422 878832 . - 0 ID=Thaps36927;Parent=Thaps36927;rank=1 chr12 . exon 878422 878832 . - . ID=Thaps36927.1;Parent=Thaps36927;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 872090 872608 . + . ID=Thaps36960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP1];external_name=Thaps36960;logic_name=jgi_thaps3 chr12 ensembl transcript 872090 872608 . + . ID=Thaps36960;Parent=Thaps36960;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 872090 872608 . + 0 ID=Thaps36960;Parent=Thaps36960;rank=1 chr12 . exon 872090 872608 . + . ID=Thaps36960.1;Parent=Thaps36960;constitutive=1;rank=1 chr12 . repeat_region 879393 879414 . ? . description=trf chr12 . repeat_region 881583 881608 . ? . description=trf chr12 . repeat_region 885426 885464 . ? . description=trf chr12 ensembl protein_coding_gene 883797 886659 . - . ID=Thaps24552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP5];external_name=Thaps24552;logic_name=jgi_thaps3 chr12 ensembl transcript 883797 886659 . - . ID=Thaps24552;Parent=Thaps24552;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 883797 884111 . - 0 ID=Thaps24552;Parent=Thaps24552;rank=4 chr12 . exon 883797 884111 . - . ID=Thaps24552.4;Parent=Thaps24552;constitutive=1;rank=4 chr12 . CDS 884181 885276 . - 0 ID=Thaps24552;Parent=Thaps24552;rank=3 chr12 . exon 884181 885276 . - . ID=Thaps24552.3;Parent=Thaps24552;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 885366 886174 . - 0 ID=Thaps24552;Parent=Thaps24552;rank=2 chr12 . exon 885366 886174 . - . ID=Thaps24552.2;Parent=Thaps24552;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 886432 886659 . - 0 ID=Thaps24552;Parent=Thaps24552;rank=1 chr12 . exon 886432 886659 . - . ID=Thaps24552.1;Parent=Thaps24552;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 886732 887019 . + . ID=Thaps36970;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP6];external_name=Thaps36970;logic_name=jgi_thaps3 chr12 ensembl transcript 886732 887019 . + . ID=Thaps36970;Parent=Thaps36970;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 886732 887019 . + 0 ID=Thaps36970;Parent=Thaps36970;rank=1 chr12 . exon 886732 887019 . + . ID=Thaps36970.1;Parent=Thaps36970;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 880266 883441 . + . ID=Thaps9218;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP4];external_name=Thaps9218;logic_name=jgi_thaps3 chr12 ensembl transcript 880266 883441 . + . ID=Thaps9218;Parent=Thaps9218;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 880266 880429 . + 0 ID=Thaps9218;Parent=Thaps9218;rank=1 chr12 . exon 880266 880429 . + . ID=Thaps9218.1;Parent=Thaps9218;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 880578 881053 . + 0 ID=Thaps9218;Parent=Thaps9218;rank=2 chr12 . exon 880578 881053 . + . ID=Thaps9218.2;Parent=Thaps9218;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 881275 882526 . + 0 ID=Thaps9218;Parent=Thaps9218;rank=3 chr12 . exon 881275 882526 . + . ID=Thaps9218.3;Parent=Thaps9218;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 882616 883441 . + 0 ID=Thaps9218;Parent=Thaps9218;rank=4 chr12 . exon 882616 883441 . + . ID=Thaps9218.4;Parent=Thaps9218;constitutive=1;ensembl_end_phase=1;rank=4 chr12 ensembl protein_coding_gene 889429 891168 . + . ID=Thaps263934;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP7];external_name=Thaps263934;logic_name=jgi_thaps3 chr12 ensembl transcript 889429 891168 . + . ID=Thaps263934;Parent=Thaps263934;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 889429 889476 . + 0 ID=Thaps263934;Parent=Thaps263934;rank=1 chr12 . exon 889429 889476 . + . ID=Thaps263934.1;Parent=Thaps263934;constitutive=1;rank=1 chr12 . CDS 889547 889556 . + 0 ID=Thaps263934;Parent=Thaps263934;rank=2 chr12 . exon 889547 889556 . + . ID=Thaps263934.2;Parent=Thaps263934;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 889619 889658 . + 0 ID=Thaps263934;Parent=Thaps263934;rank=3 chr12 . exon 889619 889658 . + . ID=Thaps263934.3;Parent=Thaps263934;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 889767 889944 . + 0 ID=Thaps263934;Parent=Thaps263934;rank=4 chr12 . exon 889767 889944 . + . ID=Thaps263934.4;Parent=Thaps263934;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 889965 889971 . + 0 ID=Thaps263934;Parent=Thaps263934;rank=5 chr12 . exon 889965 889971 . + . ID=Thaps263934.5;Parent=Thaps263934;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . CDS 890099 890550 . + 0 ID=Thaps263934;Parent=Thaps263934;rank=6 chr12 . exon 890099 890550 . + . ID=Thaps263934.6;Parent=Thaps263934;constitutive=1;ensembl_end_phase=2;rank=6 chr12 . CDS 890602 891168 . + 0 ID=Thaps263934;Parent=Thaps263934;rank=7 chr12 . exon 890602 891168 . + . ID=Thaps263934.7;Parent=Thaps263934;constitutive=1;rank=7 chr12 ensembl protein_coding_gene 893669 895172 . - . ID=Thaps9221;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP8];external_name=Thaps9221;logic_name=jgi_thaps3 chr12 ensembl transcript 893669 895172 . - . ID=Thaps9221;Parent=Thaps9221;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 893669 893715 . - 0 ID=Thaps9221;Parent=Thaps9221;rank=4 chr12 . exon 893669 893715 . - . ID=Thaps9221.4;Parent=Thaps9221;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 893949 894585 . - 0 ID=Thaps9221;Parent=Thaps9221;rank=3 chr12 . exon 893949 894585 . - . ID=Thaps9221.3;Parent=Thaps9221;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 894865 894973 . - 0 ID=Thaps9221;Parent=Thaps9221;rank=2 chr12 . exon 894865 894973 . - . ID=Thaps9221.2;Parent=Thaps9221;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 895078 895172 . - 0 ID=Thaps9221;Parent=Thaps9221;rank=1 chr12 . exon 895078 895172 . - . ID=Thaps9221.1;Parent=Thaps9221;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 895704 899852 . + . ID=Thaps9222;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAP9];external_name=Thaps9222;logic_name=jgi_thaps3 chr12 ensembl transcript 895704 899852 . + . ID=Thaps9222;Parent=Thaps9222;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 895704 895741 . + 0 ID=Thaps9222;Parent=Thaps9222;rank=1 chr12 . exon 895704 895741 . + . ID=Thaps9222.1;Parent=Thaps9222;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 895789 898877 . + 0 ID=Thaps9222;Parent=Thaps9222;rank=2 chr12 . exon 895789 898877 . + . ID=Thaps9222.2;Parent=Thaps9222;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 898960 899465 . + 0 ID=Thaps9222;Parent=Thaps9222;rank=3 chr12 . CDS 899538 899852 . + 0 ID=Thaps9222;Parent=Thaps9222;rank=4 chr12 . repeat_region 905584 905598 . ? . description=dust chr12 ensembl protein_coding_gene 907737 909207 . + . ID=Thaps24555;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ3];external_name=Thaps24555;logic_name=jgi_thaps3 chr12 ensembl transcript 907737 909207 . + . ID=Thaps24555;Parent=Thaps24555;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 907737 908423 . + 0 ID=Thaps24555;Parent=Thaps24555;rank=1 chr12 . exon 907737 908423 . + . ID=Thaps24555.1;Parent=Thaps24555;constitutive=1;rank=1 chr12 . CDS 908513 908639 . + 0 ID=Thaps24555;Parent=Thaps24555;rank=2 chr12 . exon 908513 908639 . + . ID=Thaps24555.2;Parent=Thaps24555;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 908720 909207 . + 0 ID=Thaps24555;Parent=Thaps24555;rank=3 chr12 . exon 908720 909207 . + . ID=Thaps24555.3;Parent=Thaps24555;constitutive=1;ensembl_end_phase=2;rank=3 chr12 ensembl protein_coding_gene 905964 907085 . - . ID=Thaps26398;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ2];external_name=Thaps26398;logic_name=jgi_thaps3 chr12 ensembl transcript 905964 907085 . - . ID=Thaps26398;Parent=Thaps26398;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 905964 906663 . - 0 ID=Thaps26398;Parent=Thaps26398;rank=2 chr12 . exon 905964 906663 . - . ID=Thaps26398.2;Parent=Thaps26398;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 906736 907085 . - 0 ID=Thaps26398;Parent=Thaps26398;rank=1 chr12 . exon 906736 907085 . - . ID=Thaps26398.1;Parent=Thaps26398;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 900225 901643 . - . ID=Thaps36929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ0];external_name=Thaps36929;logic_name=jgi_thaps3 chr12 ensembl transcript 900225 901643 . - . ID=Thaps36929;Parent=Thaps36929;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 900225 900492 . - 0 ID=Thaps36929;Parent=Thaps36929;rank=3 chr12 . exon 900225 900492 . - . ID=Thaps36929.3;Parent=Thaps36929;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 900919 901314 . - 0 ID=Thaps36929;Parent=Thaps36929;rank=2 chr12 . exon 900919 901314 . - . ID=Thaps36929.2;Parent=Thaps36929;constitutive=1;rank=2 chr12 . CDS 901417 901643 . - 0 ID=Thaps36929;Parent=Thaps36929;rank=1 chr12 . exon 901417 901643 . - . ID=Thaps36929.1;Parent=Thaps36929;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 902950 904044 . - . ID=Thaps719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ1];external_name=Thaps719;logic_name=jgi_thaps3 chr12 ensembl transcript 902950 904044 . - . ID=Thaps719;Parent=Thaps719;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 902950 904044 . - 0 ID=Thaps719;Parent=Thaps719;rank=1 chr12 . exon 902950 904044 . - . ID=Thaps719.1;Parent=Thaps719;constitutive=1;rank=1 chr12 . exon 898960 899465 . + . ID=Thaps9222.3;Parent=Thaps9222;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . exon 899538 899852 . + . ID=Thaps9222.4;Parent=Thaps9222;constitutive=1;rank=4 chr12 . biological_region 912971 912973 0.999 - . logic_name=eponine chr12 . repeat_region 914933 914991 . ? . description=trf chr12 . repeat_region 916030 916058 . ? . description=trf chr12 ensembl protein_coding_gene 911553 912935 . - . ID=Thaps24556;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ4];external_name=Thaps24556;logic_name=jgi_thaps3 chr12 ensembl transcript 911553 912935 . - . ID=Thaps24556;Parent=Thaps24556;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 911553 912935 . - 0 ID=Thaps24556;Parent=Thaps24556;rank=1 chr12 . exon 911553 912935 . - . ID=Thaps24556.1;Parent=Thaps24556;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 913905 915923 . - . ID=Thaps24557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ5];external_name=Thaps24557;logic_name=jgi_thaps3 chr12 ensembl transcript 913905 915923 . - . ID=Thaps24557;Parent=Thaps24557;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 913905 915923 . - 0 ID=Thaps24557;Parent=Thaps24557;rank=1 chr12 . exon 913905 915923 . - . ID=Thaps24557.1;Parent=Thaps24557;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 917006 919291 . + . ID=Thaps24558;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ6];external_name=Thaps24558;logic_name=jgi_thaps3 chr12 ensembl transcript 917006 919291 . + . ID=Thaps24558;Parent=Thaps24558;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 917006 919291 . + 0 ID=Thaps24558;Parent=Thaps24558;rank=1 chr12 . exon 917006 919291 . + . ID=Thaps24558.1;Parent=Thaps24558;constitutive=1;rank=1 chr12 . repeat_region 923314 923336 . ? . description=dust chr12 . repeat_region 923952 923970 . ? . description=dust chr12 ensembl protein_coding_gene 922320 923387 . - . ID=Thaps24559;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ8];external_name=Thaps24559;logic_name=jgi_thaps3 chr12 ensembl transcript 922320 923387 . - . ID=Thaps24559;Parent=Thaps24559;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 922320 922675 . - 0 ID=Thaps24559;Parent=Thaps24559;rank=2 chr12 . exon 922320 922675 . - . ID=Thaps24559.2;Parent=Thaps24559;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 922775 923387 . - 0 ID=Thaps24559;Parent=Thaps24559;rank=1 chr12 . exon 922775 923387 . - . ID=Thaps24559.1;Parent=Thaps24559;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 924654 925623 . - . ID=Thaps24560;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ9];external_name=Thaps24560;logic_name=jgi_thaps3 chr12 ensembl transcript 924654 925623 . - . ID=Thaps24560;Parent=Thaps24560;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 924654 925146 . - 0 ID=Thaps24560;Parent=Thaps24560;rank=2 chr12 . exon 924654 925146 . - . ID=Thaps24560.2;Parent=Thaps24560;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 925340 925623 . - 0 ID=Thaps24560;Parent=Thaps24560;rank=1 chr12 . exon 925340 925623 . - . ID=Thaps24560.1;Parent=Thaps24560;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 927158 927652 . - . ID=Thaps263935;biotype=protein_coding;description=Pas-domain protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAR0];external_name=Thaps263935;logic_name=jgi_thaps3 chr12 ensembl transcript 927158 927652 . - . ID=Thaps263935;Parent=Thaps263935;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 927158 927652 . - 0 ID=Thaps263935;Parent=Thaps263935;rank=1 chr12 . exon 927158 927652 . - . ID=Thaps263935.1;Parent=Thaps263935;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 919849 921902 . + . ID=Thaps9230;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAQ7];external_name=Thaps9230;logic_name=jgi_thaps3 chr12 ensembl transcript 919849 921902 . + . ID=Thaps9230;Parent=Thaps9230;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 919849 920245 . + 0 ID=Thaps9230;Parent=Thaps9230;rank=1 chr12 . exon 919849 920245 . + . ID=Thaps9230.1;Parent=Thaps9230;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 920472 920902 . + 0 ID=Thaps9230;Parent=Thaps9230;rank=2 chr12 . exon 920472 920902 . + . ID=Thaps9230.2;Parent=Thaps9230;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 921018 921461 . + 0 ID=Thaps9230;Parent=Thaps9230;rank=3 chr12 . exon 921018 921461 . + . ID=Thaps9230.3;Parent=Thaps9230;constitutive=1;rank=3 chr12 . CDS 921570 921902 . + 0 ID=Thaps9230;Parent=Thaps9230;rank=4 chr12 . exon 921570 921902 . + . ID=Thaps9230.4;Parent=Thaps9230;constitutive=1;rank=4 chr12 . repeat_region 934920 934946 . ? . description=trf chr12 . repeat_region 937651 937828 . ? . description=trf chr12 ensembl protein_coding_gene 932489 934336 . + . ID=Thaps24561;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAR2];external_name=Thaps24561;logic_name=jgi_thaps3 chr12 ensembl transcript 932489 934336 . + . ID=Thaps24561;Parent=Thaps24561;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 932489 933513 . + 0 ID=Thaps24561;Parent=Thaps24561;rank=1 chr12 . exon 932489 933513 . + . ID=Thaps24561.1;Parent=Thaps24561;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 933603 934197 . + 0 ID=Thaps24561;Parent=Thaps24561;rank=2 chr12 . exon 933603 934197 . + . ID=Thaps24561.2;Parent=Thaps24561;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 934292 934336 . + 0 ID=Thaps24561;Parent=Thaps24561;rank=3 chr12 . exon 934292 934336 . + . ID=Thaps24561.3;Parent=Thaps24561;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 929082 930377 . - . ID=Thaps263936;biotype=protein_coding;description=Subtilisin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8CAR1];external_name=Thaps263936;logic_name=jgi_thaps3 chr12 ensembl transcript 929082 930377 . - . ID=Thaps263936;Parent=Thaps263936;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 929082 929267 . - 0 ID=Thaps263936;Parent=Thaps263936;rank=6 chr12 . exon 929082 929267 . - . ID=Thaps263936.6;Parent=Thaps263936;constitutive=1;rank=6 chr12 . CDS 929286 929330 . - 0 ID=Thaps263936;Parent=Thaps263936;rank=5 chr12 . exon 929286 929330 . - . ID=Thaps263936.5;Parent=Thaps263936;constitutive=1;rank=5 chr12 . CDS 929373 929436 . - 0 ID=Thaps263936;Parent=Thaps263936;rank=4 chr12 . exon 929373 929436 . - . ID=Thaps263936.4;Parent=Thaps263936;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 929494 930124 . - 0 ID=Thaps263936;Parent=Thaps263936;rank=3 chr12 . exon 929494 930124 . - . ID=Thaps263936.3;Parent=Thaps263936;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 930140 930243 . - 0 ID=Thaps263936;Parent=Thaps263936;rank=2 chr12 . exon 930140 930243 . - . ID=Thaps263936.2;Parent=Thaps263936;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 930280 930377 . - 0 ID=Thaps263936;Parent=Thaps263936;rank=1 chr12 . exon 930280 930377 . - . ID=Thaps263936.1;Parent=Thaps263936;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 935706 937265 . - . ID=Thaps9236;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAR3];external_name=Thaps9236;logic_name=jgi_thaps3 chr12 ensembl transcript 935706 937265 . - . ID=Thaps9236;Parent=Thaps9236;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 935706 936142 . - 0 ID=Thaps9236;Parent=Thaps9236;rank=2 chr12 . exon 935706 936142 . - . ID=Thaps9236.2;Parent=Thaps9236;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 936356 937265 . - 0 ID=Thaps9236;Parent=Thaps9236;rank=1 chr12 . exon 936356 937265 . - . ID=Thaps9236.1;Parent=Thaps9236;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . repeat_region 944508 944545 . ? . description=dust chr12 . repeat_region 944961 944968 . ? . description=dust chr12 . repeat_region 945770 945792 . ? . description=dust chr12 ensembl protein_coding_gene 946058 950858 . + . ID=Thaps24562;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAR5];external_name=Thaps24562;logic_name=jgi_thaps3 chr12 ensembl transcript 946058 950858 . + . ID=Thaps24562;Parent=Thaps24562;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 946058 948909 . + 0 ID=Thaps24562;Parent=Thaps24562;rank=1 chr12 . exon 946058 948909 . + . ID=Thaps24562.1;Parent=Thaps24562;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 949016 949118 . + 0 ID=Thaps24562;Parent=Thaps24562;rank=2 chr12 . CDS 949203 950858 . + 0 ID=Thaps24562;Parent=Thaps24562;rank=3 chr12 ensembl gene 940875 942663 . - . ID=Thaps263937;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr12 ensembl transcript 940875 942663 . - . ID=Thaps263937;Parent=Thaps263937;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr12 . exon 940875 941011 . - . ID=Thaps263937.8;Parent=Thaps263937;constitutive=1;ensembl_end_phase=2;rank=8 chr12 . exon 941085 941089 . - . ID=Thaps263937.7;Parent=Thaps263937;constitutive=1;ensembl_end_phase=2;rank=7 chr12 . exon 941107 941239 . - . ID=Thaps263937.6;Parent=Thaps263937;constitutive=1;ensembl_end_phase=1;rank=6 chr12 . exon 941310 941360 . - . ID=Thaps263937.5;Parent=Thaps263937;constitutive=1;rank=5 chr12 . exon 941456 941594 . - . ID=Thaps263937.4;Parent=Thaps263937;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . exon 941895 941937 . - . ID=Thaps263937.3;Parent=Thaps263937;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . exon 941955 942336 . - . ID=Thaps263937.2;Parent=Thaps263937;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 942379 942663 . - . ID=Thaps263937.1;Parent=Thaps263937;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 944107 945128 . - . ID=Thaps9238;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAR4];external_name=Thaps9238;logic_name=jgi_thaps3 chr12 ensembl transcript 944107 945128 . - . ID=Thaps9238;Parent=Thaps9238;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 944107 944810 . - 0 ID=Thaps9238;Parent=Thaps9238;rank=2 chr12 . exon 944107 944810 . - . ID=Thaps9238.2;Parent=Thaps9238;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 945077 945128 . - 0 ID=Thaps9238;Parent=Thaps9238;rank=1 chr12 . exon 945077 945128 . - . ID=Thaps9238.1;Parent=Thaps9238;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . repeat_region 951735 951805 . ? . description=trf chr12 . repeat_region 953729 954456 . ? . description=trf chr12 . repeat_region 953887 954572 . ? . description=trf chr12 . repeat_region 953962 954265 . ? . description=trf chr12 . exon 949016 949118 . + . ID=Thaps24562.2;Parent=Thaps24562;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . exon 949203 950858 . + . ID=Thaps24562.3;Parent=Thaps24562;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 951660 953867 . + . ID=Thaps9240;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAR6];external_name=Thaps9240;logic_name=jgi_thaps3 chr12 ensembl transcript 951660 953867 . + . ID=Thaps9240;Parent=Thaps9240;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 951660 952631 . + 0 ID=Thaps9240;Parent=Thaps9240;rank=1 chr12 . exon 951660 952631 . + . ID=Thaps9240.1;Parent=Thaps9240;constitutive=1;rank=1 chr12 . CDS 952727 953488 . + 0 ID=Thaps9240;Parent=Thaps9240;rank=2 chr12 . exon 952727 953488 . + . ID=Thaps9240.2;Parent=Thaps9240;constitutive=1;rank=2 chr12 . CDS 953736 953867 . + 0 ID=Thaps9240;Parent=Thaps9240;rank=3 chr12 . exon 953736 953867 . + . ID=Thaps9240.3;Parent=Thaps9240;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 954782 958181 . + . ID=Thaps9241;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAR7];external_name=Thaps9241;logic_name=jgi_thaps3 chr12 ensembl transcript 954782 958181 . + . ID=Thaps9241;Parent=Thaps9241;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 954782 955756 . + 0 ID=Thaps9241;Parent=Thaps9241;rank=1 chr12 . exon 954782 955756 . + . ID=Thaps9241.1;Parent=Thaps9241;constitutive=1;rank=1 chr12 . CDS 955826 956212 . + 0 ID=Thaps9241;Parent=Thaps9241;rank=2 chr12 . exon 955826 956212 . + . ID=Thaps9241.2;Parent=Thaps9241;constitutive=1;rank=2 chr12 . CDS 956316 956609 . + 0 ID=Thaps9241;Parent=Thaps9241;rank=3 chr12 . exon 956316 956609 . + . ID=Thaps9241.3;Parent=Thaps9241;constitutive=1;rank=3 chr12 . CDS 956740 956940 . + 0 ID=Thaps9241;Parent=Thaps9241;rank=4 chr12 . exon 956740 956940 . + . ID=Thaps9241.4;Parent=Thaps9241;constitutive=1;rank=4 chr12 . CDS 957048 957081 . + 0 ID=Thaps9241;Parent=Thaps9241;rank=5 chr12 . exon 957048 957081 . + . ID=Thaps9241.5;Parent=Thaps9241;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . CDS 957165 957283 . + 0 ID=Thaps9241;Parent=Thaps9241;rank=6 chr12 . exon 957165 957283 . + . ID=Thaps9241.6;Parent=Thaps9241;constitutive=1;ensembl_end_phase=2;rank=6 chr12 . CDS 957325 957607 . + 0 ID=Thaps9241;Parent=Thaps9241;rank=7 chr12 . exon 957325 957607 . + . ID=Thaps9241.7;Parent=Thaps9241;constitutive=1;ensembl_end_phase=1;rank=7 chr12 . CDS 957689 957889 . + 0 ID=Thaps9241;Parent=Thaps9241;rank=8 chr12 . exon 957689 957889 . + . ID=Thaps9241.8;Parent=Thaps9241;constitutive=1;rank=8 chr12 . CDS 957970 958181 . + 0 ID=Thaps9241;Parent=Thaps9241;rank=9 chr12 . exon 957970 958181 . + . ID=Thaps9241.9;Parent=Thaps9241;constitutive=1;ensembl_end_phase=2;rank=9 chr12 . repeat_region 961831 961978 . + . description=SAT1_TP chr12 . repeat_region 961999 962152 . + . description=SAT1_TP chr12 . repeat_region 962170 962312 . + . description=SAT1_TP chr12 . repeat_region 962325 962497 . + . description=SAT1_TP chr12 . repeat_region 962496 962668 . + . description=SAT1_TP chr12 . repeat_region 962670 962831 . + . description=SAT1_TP chr12 . repeat_region 965368 965515 . + . description=SAT1_TP chr12 . repeat_region 965517 965690 . + . description=SAT1_TP chr12 . repeat_region 965691 965863 . + . description=SAT1_TP chr12 . repeat_region 965865 966038 . + . description=SAT1_TP chr12 . repeat_region 966039 966211 . + . description=SAT1_TP chr12 . repeat_region 966213 966385 . + . description=SAT1_TP chr12 . repeat_region 966566 966608 . ? . description=dust chr12 . repeat_region 967079 967122 . ? . description=dust chr12 . repeat_region 967578 967613 . ? . description=dust chr12 . repeat_region 967696 967859 . - . description=TE2a_TP chr12 . repeat_region 968099 971631 . ? . description=dust chr12 ensembl protein_coding_gene 965245 966436 . + . ID=Thaps263938;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAR8];external_name=Thaps263938;logic_name=jgi_thaps3 chr12 ensembl transcript 965245 966436 . + . ID=Thaps263938;Parent=Thaps263938;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 965245 965698 . + 0 ID=Thaps263938;Parent=Thaps263938;rank=1 chr12 . exon 965245 965698 . + . ID=Thaps263938.1;Parent=Thaps263938;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 965885 966436 . + 0 ID=Thaps263938;Parent=Thaps263938;rank=2 chr12 . exon 965885 966436 . + . ID=Thaps263938.2;Parent=Thaps263938;constitutive=1;rank=2 chr12 . repeat_region 973590 973890 . ? . description=trf chr12 . repeat_region 973857 974108 . ? . description=trf chr12 . repeat_region 977914 977944 . ? . description=trf chr12 . repeat_region 978177 983302 . ? . description=trf chr12 ensembl protein_coding_gene 971699 973371 . + . ID=Thaps9242;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAR9];external_name=Thaps9242;logic_name=jgi_thaps3 chr12 ensembl transcript 971699 973371 . + . ID=Thaps9242;Parent=Thaps9242;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 971699 971866 . + 0 ID=Thaps9242;Parent=Thaps9242;rank=1 chr12 . exon 971699 971866 . + . ID=Thaps9242.1;Parent=Thaps9242;constitutive=1;rank=1 chr12 . CDS 971918 972493 . + 0 ID=Thaps9242;Parent=Thaps9242;rank=2 chr12 . exon 971918 972493 . + . ID=Thaps9242.2;Parent=Thaps9242;constitutive=1;rank=2 chr12 . CDS 972589 973371 . + 0 ID=Thaps9242;Parent=Thaps9242;rank=3 chr12 . exon 972589 973371 . + . ID=Thaps9242.3;Parent=Thaps9242;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 974207 977609 . + . ID=Thaps9243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS0];external_name=Thaps9243;logic_name=jgi_thaps3 chr12 ensembl transcript 974207 977609 . + . ID=Thaps9243;Parent=Thaps9243;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 974207 975184 . + 0 ID=Thaps9243;Parent=Thaps9243;rank=1 chr12 . exon 974207 975184 . + . ID=Thaps9243.1;Parent=Thaps9243;constitutive=1;rank=1 chr12 . CDS 975335 975640 . + 0 ID=Thaps9243;Parent=Thaps9243;rank=2 chr12 . exon 975335 975640 . + . ID=Thaps9243.2;Parent=Thaps9243;constitutive=1;rank=2 chr12 . CDS 975744 976037 . + 0 ID=Thaps9243;Parent=Thaps9243;rank=3 chr12 . exon 975744 976037 . + . ID=Thaps9243.3;Parent=Thaps9243;constitutive=1;rank=3 chr12 . CDS 976317 976381 . + 0 ID=Thaps9243;Parent=Thaps9243;rank=4 chr12 . exon 976317 976381 . + . ID=Thaps9243.4;Parent=Thaps9243;constitutive=1;ensembl_end_phase=2;rank=4 chr12 . CDS 976525 976711 . + 0 ID=Thaps9243;Parent=Thaps9243;rank=5 chr12 . exon 976525 976711 . + . ID=Thaps9243.5;Parent=Thaps9243;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . CDS 976798 977035 . + 0 ID=Thaps9243;Parent=Thaps9243;rank=6 chr12 . exon 976798 977035 . + . ID=Thaps9243.6;Parent=Thaps9243;constitutive=1;ensembl_end_phase=1;rank=6 chr12 . CDS 977117 977317 . + 0 ID=Thaps9243;Parent=Thaps9243;rank=7 chr12 . exon 977117 977317 . + . ID=Thaps9243.7;Parent=Thaps9243;constitutive=1;rank=7 chr12 . CDS 977398 977609 . + 0 ID=Thaps9243;Parent=Thaps9243;rank=8 chr12 . exon 977398 977609 . + . ID=Thaps9243.8;Parent=Thaps9243;constitutive=1;ensembl_end_phase=2;rank=8 chr12 . repeat_region 982321 982364 . ? . description=dust chr12 . repeat_region 982820 982852 . ? . description=dust chr12 . biological_region 987163 987165 0.999 - . logic_name=eponine chr12 . repeat_region 988427 988446 . ? . description=dust chr12 ensembl protein_coding_gene 984971 986578 . - . ID=Thaps36764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS2];external_name=Thaps36764;logic_name=jgi_thaps3 chr12 ensembl transcript 984971 986578 . - . ID=Thaps36764;Parent=Thaps36764;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 984971 985037 . - 0 ID=Thaps36764;Parent=Thaps36764;rank=4 chr12 . exon 984971 985037 . - . ID=Thaps36764.4;Parent=Thaps36764;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 985124 985723 . - 0 ID=Thaps36764;Parent=Thaps36764;rank=3 chr12 . exon 985124 985723 . - . ID=Thaps36764.3;Parent=Thaps36764;constitutive=1;rank=3 chr12 . CDS 985811 986037 . - 0 ID=Thaps36764;Parent=Thaps36764;rank=2 chr12 . exon 985811 986037 . - . ID=Thaps36764.2;Parent=Thaps36764;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 986132 986578 . - 0 ID=Thaps36764;Parent=Thaps36764;rank=1 chr12 . exon 986132 986578 . - . ID=Thaps36764.1;Parent=Thaps36764;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 983098 983994 . + . ID=Thaps9244;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS1];external_name=Thaps9244;logic_name=jgi_thaps3 chr12 ensembl transcript 983098 983994 . + . ID=Thaps9244;Parent=Thaps9244;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 983098 983208 . + 0 ID=Thaps9244;Parent=Thaps9244;rank=1 chr12 . exon 983098 983208 . + . ID=Thaps9244.1;Parent=Thaps9244;constitutive=1;rank=1 chr12 . CDS 983344 983994 . + 0 ID=Thaps9244;Parent=Thaps9244;rank=2 chr12 . exon 983344 983994 . + . ID=Thaps9244.2;Parent=Thaps9244;constitutive=1;rank=2 chr12 . repeat_region 989828 989865 . ? . description=trf chr12 . repeat_region 989828 989865 . ? . description=trf chr12 . repeat_region 992131 992189 . ? . description=trf chr12 . repeat_region 992137 992183 . ? . description=trf chr12 . repeat_region 992140 992179 . ? . description=trf chr12 . repeat_region 995425 995934 . ? . description=trf chr12 . repeat_region 995793 995999 . ? . description=trf chr12 ensembl protein_coding_gene 996780 997646 . + . ID=Thaps263944;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS5];external_name=Thaps263944;logic_name=jgi_thaps3 chr12 ensembl transcript 996780 997646 . + . ID=Thaps263944;Parent=Thaps263944;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 996780 997508 . + 0 ID=Thaps263944;Parent=Thaps263944;rank=1 chr12 . exon 996780 997508 . + . ID=Thaps263944.1;Parent=Thaps263944;constitutive=1;rank=1 chr12 . CDS 997602 997646 . + 0 ID=Thaps263944;Parent=Thaps263944;rank=2 chr12 . exon 997602 997646 . + . ID=Thaps263944.2;Parent=Thaps263944;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 989390 990626 . + . ID=Thaps9246;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS3];external_name=Thaps9246;logic_name=jgi_thaps3 chr12 ensembl transcript 989390 990626 . + . ID=Thaps9246;Parent=Thaps9246;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 989390 989438 . + 0 ID=Thaps9246;Parent=Thaps9246;rank=1 chr12 . exon 989390 989438 . + . ID=Thaps9246.1;Parent=Thaps9246;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 989533 990626 . + 0 ID=Thaps9246;Parent=Thaps9246;rank=2 chr12 . exon 989533 990626 . + . ID=Thaps9246.2;Parent=Thaps9246;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 991717 992232 . + . ID=Thaps9247;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS4];external_name=Thaps9247;logic_name=jgi_thaps3 chr12 ensembl transcript 991717 992232 . + . ID=Thaps9247;Parent=Thaps9247;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 991717 992232 . + 0 ID=Thaps9247;Parent=Thaps9247;rank=1 chr12 . exon 991717 992232 . + . ID=Thaps9247.1;Parent=Thaps9247;constitutive=1;rank=1 chr12 . repeat_region 1003873 1003898 . ? . description=dust chr12 ensembl protein_coding_gene 1004805 1005920 . - . ID=Thaps24563;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS7];external_name=Thaps24563;logic_name=jgi_thaps3 chr12 ensembl transcript 1004805 1005920 . - . ID=Thaps24563;Parent=Thaps24563;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1004805 1005920 . - 0 ID=Thaps24563;Parent=Thaps24563;rank=1 chr12 . exon 1004805 1005920 . - . ID=Thaps24563.1;Parent=Thaps24563;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 1007382 1009329 . + . ID=Thaps24564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS8];external_name=Thaps24564;logic_name=jgi_thaps3 chr12 ensembl transcript 1007382 1009329 . + . ID=Thaps24564;Parent=Thaps24564;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1007382 1008311 . + 0 ID=Thaps24564;Parent=Thaps24564;rank=1 chr12 . exon 1007382 1008311 . + . ID=Thaps24564.1;Parent=Thaps24564;constitutive=1;rank=1 chr12 . CDS 1008407 1009171 . + 0 ID=Thaps24564;Parent=Thaps24564;rank=2 chr12 . exon 1008407 1009171 . + . ID=Thaps24564.2;Parent=Thaps24564;constitutive=1;rank=2 chr12 . CDS 1009306 1009329 . + 0 ID=Thaps24564;Parent=Thaps24564;rank=3 chr12 ensembl protein_coding_gene 1000019 1002236 . - . ID=Thaps263945;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS6];external_name=Thaps263945;logic_name=jgi_thaps3 chr12 ensembl transcript 1000019 1002236 . - . ID=Thaps263945;Parent=Thaps263945;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1000019 1000271 . - 0 ID=Thaps263945;Parent=Thaps263945;rank=4 chr12 . exon 1000019 1000271 . - . ID=Thaps263945.4;Parent=Thaps263945;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 1000354 1000593 . - 0 ID=Thaps263945;Parent=Thaps263945;rank=3 chr12 . exon 1000354 1000593 . - . ID=Thaps263945.3;Parent=Thaps263945;constitutive=1;rank=3 chr12 . CDS 1000669 1001851 . - 0 ID=Thaps263945;Parent=Thaps263945;rank=2 chr12 . exon 1000669 1001851 . - . ID=Thaps263945.2;Parent=Thaps263945;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 1001882 1002236 . - 0 ID=Thaps263945;Parent=Thaps263945;rank=1 chr12 . exon 1001882 1002236 . - . ID=Thaps263945.1;Parent=Thaps263945;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . exon 1009306 1009329 . + . ID=Thaps24564.3;Parent=Thaps24564;constitutive=1;rank=3 chr12 ensembl protein_coding_gene 1013977 1018447 . - . ID=Thaps24565;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAT1];external_name=Thaps24565;logic_name=jgi_thaps3 chr12 ensembl transcript 1013977 1018447 . - . ID=Thaps24565;Parent=Thaps24565;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1013977 1013995 . - 0 ID=Thaps24565;Parent=Thaps24565;rank=4 chr12 . exon 1013977 1013995 . - . ID=Thaps24565.4;Parent=Thaps24565;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 1014069 1016670 . - 0 ID=Thaps24565;Parent=Thaps24565;rank=3 chr12 . exon 1014069 1016670 . - . ID=Thaps24565.3;Parent=Thaps24565;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 1016758 1018318 . - 0 ID=Thaps24565;Parent=Thaps24565;rank=2 chr12 . exon 1016758 1018318 . - . ID=Thaps24565.2;Parent=Thaps24565;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 1018427 1018447 . - 0 ID=Thaps24565;Parent=Thaps24565;rank=1 chr12 . exon 1018427 1018447 . - . ID=Thaps24565.1;Parent=Thaps24565;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 1012242 1013674 . + . ID=Thaps263946;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAT0];external_name=Thaps263946;logic_name=jgi_thaps3 chr12 ensembl transcript 1012242 1013674 . + . ID=Thaps263946;Parent=Thaps263946;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1012242 1012589 . + 0 ID=Thaps263946;Parent=Thaps263946;rank=1 chr12 . exon 1012242 1012589 . + . ID=Thaps263946.1;Parent=Thaps263946;constitutive=1;rank=1 chr12 . CDS 1012899 1013674 . + 0 ID=Thaps263946;Parent=Thaps263946;rank=2 chr12 . exon 1012899 1013674 . + . ID=Thaps263946.2;Parent=Thaps263946;constitutive=1;ensembl_end_phase=2;rank=2 chr12 ensembl protein_coding_gene 1009427 1010944 . - . ID=Thaps9252;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAS9];external_name=Thaps9252;logic_name=jgi_thaps3 chr12 ensembl transcript 1009427 1010944 . - . ID=Thaps9252;Parent=Thaps9252;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1009427 1009896 . - 0 ID=Thaps9252;Parent=Thaps9252;rank=2 chr12 . exon 1009427 1009896 . - . ID=Thaps9252.2;Parent=Thaps9252;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1010026 1010944 . - 0 ID=Thaps9252;Parent=Thaps9252;rank=1 chr12 . exon 1010026 1010944 . - . ID=Thaps9252.1;Parent=Thaps9252;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . repeat_region 1020745 1020795 . ? . description=dust chr12 ensembl protein_coding_gene 1022035 1024893 . + . ID=Thaps263947;biotype=protein_coding;description=Chromodomain-helicase [Source:UniProtKB/TrEMBL%3BAcc:B8CAT3];external_name=Thaps263947;logic_name=jgi_thaps3 chr12 ensembl transcript 1022035 1024893 . + . ID=Thaps263947;Parent=Thaps263947;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1022035 1022464 . + 0 ID=Thaps263947;Parent=Thaps263947;rank=1 chr12 . exon 1022035 1022464 . + . ID=Thaps263947.1;Parent=Thaps263947;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . CDS 1022621 1022721 . + 0 ID=Thaps263947;Parent=Thaps263947;rank=2 chr12 . exon 1022621 1022721 . + . ID=Thaps263947.2;Parent=Thaps263947;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1022902 1023136 . + 0 ID=Thaps263947;Parent=Thaps263947;rank=3 chr12 . exon 1022902 1023136 . + . ID=Thaps263947.3;Parent=Thaps263947;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 1023215 1023326 . + 0 ID=Thaps263947;Parent=Thaps263947;rank=4 chr12 . exon 1023215 1023326 . + . ID=Thaps263947.4;Parent=Thaps263947;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 1023400 1023501 . + 0 ID=Thaps263947;Parent=Thaps263947;rank=5 chr12 . exon 1023400 1023501 . + . ID=Thaps263947.5;Parent=Thaps263947;constitutive=1;rank=5 chr12 . CDS 1023582 1023812 . + 0 ID=Thaps263947;Parent=Thaps263947;rank=6 chr12 . exon 1023582 1023812 . + . ID=Thaps263947.6;Parent=Thaps263947;constitutive=1;rank=6 chr12 . CDS 1023895 1024360 . + 0 ID=Thaps263947;Parent=Thaps263947;rank=7 chr12 . exon 1023895 1024360 . + . ID=Thaps263947.7;Parent=Thaps263947;constitutive=1;ensembl_end_phase=1;rank=7 chr12 . CDS 1024439 1024478 . + 0 ID=Thaps263947;Parent=Thaps263947;rank=8 chr12 . exon 1024439 1024478 . + . ID=Thaps263947.8;Parent=Thaps263947;constitutive=1;ensembl_end_phase=1;rank=8 chr12 . CDS 1024515 1024893 . + 0 ID=Thaps263947;Parent=Thaps263947;rank=9 chr12 . exon 1024515 1024893 . + . ID=Thaps263947.9;Parent=Thaps263947;constitutive=1;ensembl_end_phase=1;rank=9 chr12 ensembl protein_coding_gene 1019596 1020309 . - . ID=Thaps9255;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAT2];external_name=Thaps9255;logic_name=jgi_thaps3 chr12 ensembl transcript 1019596 1020309 . - . ID=Thaps9255;Parent=Thaps9255;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1019596 1020309 . - 0 ID=Thaps9255;Parent=Thaps9255;rank=1 chr12 . exon 1019596 1020309 . - . ID=Thaps9255.1;Parent=Thaps9255;constitutive=1;rank=1 chr12 . repeat_region 1033868 1033900 . ? . description=trf chr12 . biological_region 1035247 1035251 0.999 + . logic_name=eponine chr12 ensembl protein_coding_gene 1029489 1034957 . - . ID=Thaps9257;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAT4];external_name=Thaps9257;logic_name=jgi_thaps3 chr12 ensembl transcript 1029489 1034957 . - . ID=Thaps9257;Parent=Thaps9257;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1029489 1029554 . - 0 ID=Thaps9257;Parent=Thaps9257;rank=5 chr12 . exon 1029489 1029554 . - . ID=Thaps9257.5;Parent=Thaps9257;constitutive=1;rank=5 chr12 . CDS 1029581 1029913 . - 0 ID=Thaps9257;Parent=Thaps9257;rank=4 chr12 . exon 1029581 1029913 . - . ID=Thaps9257.4;Parent=Thaps9257;constitutive=1;rank=4 chr12 . CDS 1030016 1032037 . - 0 ID=Thaps9257;Parent=Thaps9257;rank=3 chr12 . exon 1030016 1032037 . - . ID=Thaps9257.3;Parent=Thaps9257;constitutive=1;rank=3 chr12 . CDS 1032200 1034788 . - 0 ID=Thaps9257;Parent=Thaps9257;rank=2 chr12 . exon 1032200 1034788 . - . ID=Thaps9257.2;Parent=Thaps9257;constitutive=1;rank=2 chr12 . CDS 1034937 1034957 . - 0 ID=Thaps9257;Parent=Thaps9257;rank=1 chr12 . exon 1034937 1034957 . - . ID=Thaps9257.1;Parent=Thaps9257;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 1035530 1036237 . + . ID=Thaps9258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAT5];external_name=Thaps9258;logic_name=jgi_thaps3 chr12 ensembl transcript 1035530 1036237 . + . ID=Thaps9258;Parent=Thaps9258;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1035530 1036237 . + 0 ID=Thaps9258;Parent=Thaps9258;rank=1 chr12 . exon 1035530 1036237 . + . ID=Thaps9258.1;Parent=Thaps9258;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 1038011 1043865 . - . ID=Thaps9259;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAT6];external_name=Thaps9259;logic_name=jgi_thaps3 chr12 ensembl transcript 1038011 1043865 . - . ID=Thaps9259;Parent=Thaps9259;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1038011 1038156 . - 0 ID=Thaps9259;Parent=Thaps9259;rank=2 chr12 . exon 1038011 1038156 . - . ID=Thaps9259.2;Parent=Thaps9259;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1038459 1043865 . - 0 ID=Thaps9259;Parent=Thaps9259;rank=1 chr12 . exon 1038459 1043865 . - . ID=Thaps9259.1;Parent=Thaps9259;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 1043970 1049324 . - . ID=Thaps9260;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAT7];external_name=Thaps9260;logic_name=jgi_thaps3 chr12 ensembl transcript 1043970 1049324 . - . ID=Thaps9260;Parent=Thaps9260;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1043970 1049324 . - 0 ID=Thaps9260;Parent=Thaps9260;rank=1 chr12 . exon 1043970 1049324 . - . ID=Thaps9260.1;Parent=Thaps9260;constitutive=1;rank=1 chr12 . repeat_region 1055260 1055375 . ? . description=trf chr12 . repeat_region 1055529 1055585 . ? . description=trf chr12 ensembl protein_coding_gene 1055441 1057251 . + . ID=Thaps24566;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU1];external_name=Thaps24566;logic_name=jgi_thaps3 chr12 ensembl transcript 1055441 1057251 . + . ID=Thaps24566;Parent=Thaps24566;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1055441 1055506 . + 0 ID=Thaps24566;Parent=Thaps24566;rank=1 chr12 . exon 1055441 1055506 . + . ID=Thaps24566.1;Parent=Thaps24566;constitutive=1;rank=1 chr12 . CDS 1055562 1055590 . + 0 ID=Thaps24566;Parent=Thaps24566;rank=2 chr12 . exon 1055562 1055590 . + . ID=Thaps24566.2;Parent=Thaps24566;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1055623 1056297 . + 0 ID=Thaps24566;Parent=Thaps24566;rank=3 chr12 . exon 1055623 1056297 . + . ID=Thaps24566.3;Parent=Thaps24566;constitutive=1;rank=3 chr12 . CDS 1056446 1056635 . + 0 ID=Thaps24566;Parent=Thaps24566;rank=4 chr12 . exon 1056446 1056635 . + . ID=Thaps24566.4;Parent=Thaps24566;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 1056740 1056979 . + 0 ID=Thaps24566;Parent=Thaps24566;rank=5 chr12 . exon 1056740 1056979 . + . ID=Thaps24566.5;Parent=Thaps24566;constitutive=1;rank=5 chr12 . CDS 1057117 1057251 . + 0 ID=Thaps24566;Parent=Thaps24566;rank=6 chr12 . exon 1057117 1057251 . + . ID=Thaps24566.6;Parent=Thaps24566;constitutive=1;rank=6 chr12 ensembl protein_coding_gene 1049833 1050927 . + . ID=Thaps9261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAT8];external_name=Thaps9261;logic_name=jgi_thaps3 chr12 ensembl transcript 1049833 1050927 . + . ID=Thaps9261;Parent=Thaps9261;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1049833 1050419 . + 0 ID=Thaps9261;Parent=Thaps9261;rank=1 chr12 . exon 1049833 1050419 . + . ID=Thaps9261.1;Parent=Thaps9261;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 1050540 1050927 . + 0 ID=Thaps9261;Parent=Thaps9261;rank=2 chr12 . exon 1050540 1050927 . + . ID=Thaps9261.2;Parent=Thaps9261;constitutive=1;ensembl_end_phase=1;rank=2 chr12 ensembl protein_coding_gene 1051965 1053202 . - . ID=Thaps9262;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAT9];external_name=Thaps9262;logic_name=jgi_thaps3 chr12 ensembl transcript 1051965 1053202 . - . ID=Thaps9262;Parent=Thaps9262;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1051965 1051989 . - 0 ID=Thaps9262;Parent=Thaps9262;rank=3 chr12 . exon 1051965 1051989 . - . ID=Thaps9262.3;Parent=Thaps9262;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 1052016 1052178 . - 0 ID=Thaps9262;Parent=Thaps9262;rank=2 chr12 . exon 1052016 1052178 . - . ID=Thaps9262.2;Parent=Thaps9262;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 1052272 1053202 . - 0 ID=Thaps9262;Parent=Thaps9262;rank=1 chr12 . exon 1052272 1053202 . - . ID=Thaps9262.1;Parent=Thaps9262;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 1053489 1054668 . + . ID=Thaps9263;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU0];external_name=Thaps9263;logic_name=jgi_thaps3 chr12 ensembl transcript 1053489 1054668 . + . ID=Thaps9263;Parent=Thaps9263;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1053489 1053560 . + 0 ID=Thaps9263;Parent=Thaps9263;rank=1 chr12 . exon 1053489 1053560 . + . ID=Thaps9263.1;Parent=Thaps9263;constitutive=1;rank=1 chr12 . CDS 1053694 1054668 . + 0 ID=Thaps9263;Parent=Thaps9263;rank=2 chr12 . exon 1053694 1054668 . + . ID=Thaps9263.2;Parent=Thaps9263;constitutive=1;rank=2 chr12 ensembl protein_coding_gene 1057368 1059691 . - . ID=Thaps9265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU2];external_name=Thaps9265;logic_name=jgi_thaps3 chr12 ensembl transcript 1057368 1059691 . - . ID=Thaps9265;Parent=Thaps9265;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1057368 1057716 . - 0 ID=Thaps9265;Parent=Thaps9265;rank=3 chr12 . exon 1057368 1057716 . - . ID=Thaps9265.3;Parent=Thaps9265;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 1057803 1058085 . - 0 ID=Thaps9265;Parent=Thaps9265;rank=2 chr12 . exon 1057803 1058085 . - . ID=Thaps9265.2;Parent=Thaps9265;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 1058140 1059691 . - 0 ID=Thaps9265;Parent=Thaps9265;rank=1 chr12 . exon 1058140 1059691 . - . ID=Thaps9265.1;Parent=Thaps9265;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . repeat_region 1066913 1066920 . ? . description=dust chr12 ensembl protein_coding_gene 1063373 1068363 . - . ID=Thaps24568;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU4];external_name=Thaps24568;logic_name=jgi_thaps3 chr12 ensembl transcript 1063373 1068363 . - . ID=Thaps24568;Parent=Thaps24568;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1063373 1064679 . - 0 ID=Thaps24568;Parent=Thaps24568;rank=2 chr12 . exon 1063373 1064679 . - . ID=Thaps24568.2;Parent=Thaps24568;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1064775 1068363 . - 0 ID=Thaps24568;Parent=Thaps24568;rank=1 chr12 . exon 1064775 1068363 . - . ID=Thaps24568.1;Parent=Thaps24568;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 1061057 1062862 . + . ID=Thaps42152;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU3];external_name=Thaps42152;logic_name=jgi_thaps3 chr12 ensembl transcript 1061057 1062862 . + . ID=Thaps42152;Parent=Thaps42152;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1061057 1061533 . + 0 ID=Thaps42152;Parent=Thaps42152;rank=1 chr12 . exon 1061057 1061533 . + . ID=Thaps42152.1;Parent=Thaps42152;constitutive=1;rank=1 chr12 . CDS 1061600 1062862 . + 0 ID=Thaps42152;Parent=Thaps42152;rank=2 chr12 . exon 1061600 1062862 . + . ID=Thaps42152.2;Parent=Thaps42152;constitutive=1;rank=2 chr12 . repeat_region 1068744 1068830 . - . description=Copia4LTR_TP chr12 . repeat_region 1071024 1071199 . + . description=TE2a_TP chr12 . repeat_region 1071098 1071144 . ? . description=trf chr12 . repeat_region 1071098 1071150 . ? . description=trf chr12 . repeat_region 1074148 1074167 . ? . description=trf chr12 ensembl protein_coding_gene 1072780 1074102 . - . ID=Thaps24569;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU6];external_name=Thaps24569;logic_name=jgi_thaps3 chr12 ensembl transcript 1072780 1074102 . - . ID=Thaps24569;Parent=Thaps24569;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1072780 1073393 . - 0 ID=Thaps24569;Parent=Thaps24569;rank=2 chr12 . exon 1072780 1073393 . - . ID=Thaps24569.2;Parent=Thaps24569;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1073496 1074102 . - 0 ID=Thaps24569;Parent=Thaps24569;rank=1 chr12 . exon 1073496 1074102 . - . ID=Thaps24569.1;Parent=Thaps24569;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 1068999 1070811 . - . ID=Thaps9268;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU5];external_name=Thaps9268;logic_name=jgi_thaps3 chr12 ensembl transcript 1068999 1070811 . - . ID=Thaps9268;Parent=Thaps9268;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1068999 1069130 . - 0 ID=Thaps9268;Parent=Thaps9268;rank=5 chr12 . exon 1068999 1069130 . - . ID=Thaps9268.5;Parent=Thaps9268;constitutive=1;rank=5 chr12 . CDS 1069254 1069505 . - 0 ID=Thaps9268;Parent=Thaps9268;rank=4 chr12 . exon 1069254 1069505 . - . ID=Thaps9268.4;Parent=Thaps9268;constitutive=1;rank=4 chr12 . CDS 1069579 1069673 . - 0 ID=Thaps9268;Parent=Thaps9268;rank=3 chr12 . exon 1069579 1069673 . - . ID=Thaps9268.3;Parent=Thaps9268;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 1069791 1069888 . - 0 ID=Thaps9268;Parent=Thaps9268;rank=2 chr12 . exon 1069791 1069888 . - . ID=Thaps9268.2;Parent=Thaps9268;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1069985 1070811 . - 0 ID=Thaps9268;Parent=Thaps9268;rank=1 chr12 . exon 1069985 1070811 . - . ID=Thaps9268.1;Parent=Thaps9268;constitutive=1;ensembl_end_phase=2;rank=1 chr12 ensembl protein_coding_gene 1075050 1077267 . + . ID=Thaps9270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU7];external_name=Thaps9270;logic_name=jgi_thaps3 chr12 ensembl transcript 1075050 1077267 . + . ID=Thaps9270;Parent=Thaps9270;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1075050 1075184 . + 0 ID=Thaps9270;Parent=Thaps9270;rank=1 chr12 . exon 1075050 1075184 . + . ID=Thaps9270.1;Parent=Thaps9270;constitutive=1;rank=1 chr12 . CDS 1075850 1076926 . + 0 ID=Thaps9270;Parent=Thaps9270;rank=2 chr12 . exon 1075850 1076926 . + . ID=Thaps9270.2;Parent=Thaps9270;constitutive=1;rank=2 chr12 . CDS 1076994 1077007 . + 0 ID=Thaps9270;Parent=Thaps9270;rank=3 chr12 . exon 1076994 1077007 . + . ID=Thaps9270.3;Parent=Thaps9270;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . CDS 1077095 1077158 . + 0 ID=Thaps9270;Parent=Thaps9270;rank=4 chr12 . exon 1077095 1077158 . + . ID=Thaps9270.4;Parent=Thaps9270;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 1077238 1077267 . + 0 ID=Thaps9270;Parent=Thaps9270;rank=5 chr12 . exon 1077238 1077267 . + . ID=Thaps9270.5;Parent=Thaps9270;constitutive=1;rank=5 chr12 . repeat_region 1081419 1081427 . ? . description=dust chr12 ensembl protein_coding_gene 1082154 1092043 . + . ID=Thaps29771;biotype=protein_coding;description=Phosphatidylinositol 3-kinase (PI3K)-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU9];external_name=Thaps29771;logic_name=jgi_thaps3 chr12 ensembl transcript 1082154 1092043 . + . ID=Thaps29771;Parent=Thaps29771;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1082154 1082564 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=1 chr12 . exon 1082154 1082564 . + . ID=Thaps29771.1;Parent=Thaps29771;constitutive=1;rank=1 chr12 . CDS 1082685 1082812 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=2 chr12 . exon 1082685 1082812 . + . ID=Thaps29771.2;Parent=Thaps29771;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1082867 1083278 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=3 chr12 . exon 1082867 1083278 . + . ID=Thaps29771.3;Parent=Thaps29771;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 1083450 1083861 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=4 chr12 . exon 1083450 1083861 . + . ID=Thaps29771.4;Parent=Thaps29771;constitutive=1;ensembl_end_phase=1;rank=4 chr12 . CDS 1084078 1084828 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=5 chr12 . exon 1084078 1084828 . + . ID=Thaps29771.5;Parent=Thaps29771;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . CDS 1084918 1085179 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=6 chr12 . exon 1084918 1085179 . + . ID=Thaps29771.6;Parent=Thaps29771;constitutive=1;ensembl_end_phase=1;rank=6 chr12 . CDS 1085462 1085596 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=7 chr12 . exon 1085462 1085596 . + . ID=Thaps29771.7;Parent=Thaps29771;constitutive=1;rank=7 chr12 . CDS 1085681 1085724 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=8 chr12 . exon 1085681 1085724 . + . ID=Thaps29771.8;Parent=Thaps29771;constitutive=1;ensembl_end_phase=2;rank=8 chr12 . CDS 1085811 1086240 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=9 chr12 . exon 1085811 1086240 . + . ID=Thaps29771.9;Parent=Thaps29771;constitutive=1;ensembl_end_phase=1;rank=9 chr12 . CDS 1086331 1086645 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=10 chr12 . exon 1086331 1086645 . + . ID=Thaps29771.10;Parent=Thaps29771;constitutive=1;rank=10 chr12 . CDS 1086772 1086962 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=11 chr12 . exon 1086772 1086962 . + . ID=Thaps29771.11;Parent=Thaps29771;constitutive=1;ensembl_end_phase=2;rank=11 chr12 . CDS 1087042 1087547 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=12 chr12 . exon 1087042 1087547 . + . ID=Thaps29771.12;Parent=Thaps29771;constitutive=1;ensembl_end_phase=2;rank=12 chr12 . CDS 1087638 1087830 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=13 chr12 . exon 1087638 1087830 . + . ID=Thaps29771.13;Parent=Thaps29771;constitutive=1;ensembl_end_phase=1;rank=13 chr12 . CDS 1087879 1087974 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=14 chr12 . exon 1087879 1087974 . + . ID=Thaps29771.14;Parent=Thaps29771;constitutive=1;rank=14 chr12 . CDS 1088044 1088549 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=15 chr12 . exon 1088044 1088549 . + . ID=Thaps29771.15;Parent=Thaps29771;constitutive=1;ensembl_end_phase=2;rank=15 chr12 . CDS 1088787 1088927 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=16 chr12 . CDS 1089039 1089733 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=17 chr12 . CDS 1089809 1090027 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=18 chr12 . CDS 1090130 1090745 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=19 chr12 . CDS 1090819 1091237 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=20 chr12 . CDS 1091660 1092043 . + 0 ID=Thaps29771;Parent=Thaps29771;rank=21 chr12 ensembl protein_coding_gene 1078794 1080629 . - . ID=Thaps9271;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAU8];external_name=Thaps9271;logic_name=jgi_thaps3 chr12 ensembl transcript 1078794 1080629 . - . ID=Thaps9271;Parent=Thaps9271;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1078794 1079063 . - 0 ID=Thaps9271;Parent=Thaps9271;rank=4 chr12 . exon 1078794 1079063 . - . ID=Thaps9271.4;Parent=Thaps9271;constitutive=1;rank=4 chr12 . CDS 1079104 1079376 . - 0 ID=Thaps9271;Parent=Thaps9271;rank=3 chr12 . exon 1079104 1079376 . - . ID=Thaps9271.3;Parent=Thaps9271;constitutive=1;rank=3 chr12 . CDS 1079462 1079538 . - 0 ID=Thaps9271;Parent=Thaps9271;rank=2 chr12 . exon 1079462 1079538 . - . ID=Thaps9271.2;Parent=Thaps9271;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1079621 1080629 . - 0 ID=Thaps9271;Parent=Thaps9271;rank=1 chr12 . exon 1079621 1080629 . - . ID=Thaps9271.1;Parent=Thaps9271;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 1092941 1095150 . + . ID=Thaps24571;biotype=protein_coding;description=Copper induced cell-surface protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAV0];external_name=P100;logic_name=jgi_thaps3 chr12 ensembl transcript 1092941 1095150 . + . ID=Thaps24571;Parent=Thaps24571;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1092941 1093933 . + 0 ID=Thaps24571;Parent=Thaps24571;rank=1 chr12 . exon 1092941 1093933 . + . ID=Thaps24571.1;Parent=Thaps24571;constitutive=1;rank=1 chr12 . CDS 1094044 1094827 . + 0 ID=Thaps24571;Parent=Thaps24571;rank=2 chr12 . exon 1094044 1094827 . + . ID=Thaps24571.2;Parent=Thaps24571;constitutive=1;ensembl_end_phase=1;rank=2 chr12 . CDS 1095119 1095150 . + 0 ID=Thaps24571;Parent=Thaps24571;rank=3 chr12 . exon 1095119 1095150 . + . ID=Thaps24571.3;Parent=Thaps24571;constitutive=1;ensembl_end_phase=2;rank=3 chr12 . exon 1088787 1088927 . + . ID=Thaps29771.16;Parent=Thaps29771;constitutive=1;rank=16 chr12 . exon 1089039 1089733 . + . ID=Thaps29771.17;Parent=Thaps29771;constitutive=1;ensembl_end_phase=2;rank=17 chr12 . exon 1089809 1090027 . + . ID=Thaps29771.18;Parent=Thaps29771;constitutive=1;rank=18 chr12 . exon 1090130 1090745 . + . ID=Thaps29771.19;Parent=Thaps29771;constitutive=1;ensembl_end_phase=1;rank=19 chr12 . exon 1090819 1091237 . + . ID=Thaps29771.20;Parent=Thaps29771;constitutive=1;ensembl_end_phase=2;rank=20 chr12 . exon 1091660 1092043 . + . ID=Thaps29771.21;Parent=Thaps29771;constitutive=1;rank=21 chr12 ensembl protein_coding_gene 1095527 1096423 . + . ID=Thaps9274;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAV1];external_name=Thaps9274;logic_name=jgi_thaps3 chr12 ensembl transcript 1095527 1096423 . + . ID=Thaps9274;Parent=Thaps9274;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1095527 1096423 . + 0 ID=Thaps9274;Parent=Thaps9274;rank=1 chr12 . exon 1095527 1096423 . + . ID=Thaps9274.1;Parent=Thaps9274;constitutive=1;rank=1 chr12 ensembl protein_coding_gene 1096502 1098679 . - . ID=Thaps9275;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAV2];external_name=Thaps9275;logic_name=jgi_thaps3 chr12 ensembl transcript 1096502 1098679 . - . ID=Thaps9275;Parent=Thaps9275;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1096502 1097007 . - 0 ID=Thaps9275;Parent=Thaps9275;rank=2 chr12 . exon 1096502 1097007 . - . ID=Thaps9275.2;Parent=Thaps9275;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1097050 1098679 . - 0 ID=Thaps9275;Parent=Thaps9275;rank=1 chr12 . exon 1097050 1098679 . - . ID=Thaps9275.1;Parent=Thaps9275;constitutive=1;ensembl_end_phase=1;rank=1 chr12 . repeat_region 1101471 1101506 . ? . description=dust chr12 . repeat_region 1101472 1101498 . ? . description=trf chr12 . repeat_region 1101472 1101506 . ? . description=trf chr12 . repeat_region 1101473 1101501 . ? . description=trf chr12 . repeat_region 1101473 1101504 . ? . description=trf chr12 . repeat_region 1103319 1103338 . ? . description=trf chr12 . repeat_region 1106585 1109006 . ? . description=trf chr12 ensembl protein_coding_gene 1100139 1101588 . - . ID=Thaps24572;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAV3];external_name=Thaps24572;logic_name=jgi_thaps3 chr12 ensembl transcript 1100139 1101588 . - . ID=Thaps24572;Parent=Thaps24572;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1100139 1100314 . - 0 ID=Thaps24572;Parent=Thaps24572;rank=2 chr12 . exon 1100139 1100314 . - . ID=Thaps24572.2;Parent=Thaps24572;constitutive=1;ensembl_end_phase=2;rank=2 chr12 . CDS 1100472 1101588 . - 0 ID=Thaps24572;Parent=Thaps24572;rank=1 chr12 . exon 1100472 1101588 . - . ID=Thaps24572.1;Parent=Thaps24572;constitutive=1;ensembl_end_phase=1;rank=1 chr12 ensembl protein_coding_gene 1103316 1112449 . + . ID=Thaps9277;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAV4];external_name=Thaps9277;logic_name=jgi_thaps3 chr12 ensembl transcript 1103316 1112449 . + . ID=Thaps9277;Parent=Thaps9277;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1103316 1103519 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=1 chr12 . exon 1103316 1103519 . + . ID=Thaps9277.1;Parent=Thaps9277;constitutive=1;rank=1 chr12 . CDS 1103648 1103701 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=2 chr12 . exon 1103648 1103701 . + . ID=Thaps9277.2;Parent=Thaps9277;constitutive=1;rank=2 chr12 . CDS 1103823 1104348 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=3 chr12 . exon 1103823 1104348 . + . ID=Thaps9277.3;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=3 chr12 . CDS 1104434 1104505 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=4 chr12 . exon 1104434 1104505 . + . ID=Thaps9277.4;Parent=Thaps9277;constitutive=1;rank=4 chr12 . CDS 1104594 1104993 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=5 chr12 . exon 1104594 1104993 . + . ID=Thaps9277.5;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=5 chr12 . CDS 1105102 1105216 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=6 chr12 . exon 1105102 1105216 . + . ID=Thaps9277.6;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=6 chr12 . CDS 1105299 1105903 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=7 chr12 . exon 1105299 1105903 . + . ID=Thaps9277.7;Parent=Thaps9277;constitutive=1;ensembl_end_phase=2;rank=7 chr12 . CDS 1105970 1106099 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=8 chr12 . exon 1105970 1106099 . + . ID=Thaps9277.8;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=8 chr12 . CDS 1106183 1106420 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=9 chr12 . exon 1106183 1106420 . + . ID=Thaps9277.9;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=9 chr12 . CDS 1106519 1106557 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=10 chr12 . exon 1106519 1106557 . + . ID=Thaps9277.10;Parent=Thaps9277;constitutive=1;rank=10 chr12 . CDS 1106632 1106744 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=11 chr12 . exon 1106632 1106744 . + . ID=Thaps9277.11;Parent=Thaps9277;constitutive=1;ensembl_end_phase=2;rank=11 chr12 . CDS 1106848 1106886 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=12 chr12 . exon 1106848 1106886 . + . ID=Thaps9277.12;Parent=Thaps9277;constitutive=1;rank=12 chr12 . CDS 1106984 1107094 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=13 chr12 . exon 1106984 1107094 . + . ID=Thaps9277.13;Parent=Thaps9277;constitutive=1;rank=13 chr12 . CDS 1107198 1107236 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=14 chr12 . exon 1107198 1107236 . + . ID=Thaps9277.14;Parent=Thaps9277;constitutive=1;rank=14 chr12 . CDS 1107334 1107444 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=15 chr12 . exon 1107334 1107444 . + . ID=Thaps9277.15;Parent=Thaps9277;constitutive=1;rank=15 chr12 . CDS 1107548 1107586 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=16 chr12 . exon 1107548 1107586 . + . ID=Thaps9277.16;Parent=Thaps9277;constitutive=1;rank=16 chr12 . CDS 1107684 1107794 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=17 chr12 . exon 1107684 1107794 . + . ID=Thaps9277.17;Parent=Thaps9277;constitutive=1;rank=17 chr12 . CDS 1107898 1107936 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=18 chr12 . exon 1107898 1107936 . + . ID=Thaps9277.18;Parent=Thaps9277;constitutive=1;rank=18 chr12 . CDS 1108120 1108143 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=19 chr12 . exon 1108120 1108143 . + . ID=Thaps9277.19;Parent=Thaps9277;constitutive=1;rank=19 chr12 . CDS 1108247 1108285 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=20 chr12 . exon 1108247 1108285 . + . ID=Thaps9277.20;Parent=Thaps9277;constitutive=1;rank=20 chr12 . CDS 1108383 1108493 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=21 chr12 . exon 1108383 1108493 . + . ID=Thaps9277.21;Parent=Thaps9277;constitutive=1;rank=21 chr12 . CDS 1108614 1108635 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=22 chr12 . CDS 1108819 1108842 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=23 chr12 . CDS 1108946 1108984 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=24 chr12 . CDS 1109059 1109171 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=25 chr12 . CDS 1109275 1109313 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=26 chr12 . CDS 1109477 1109642 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=27 chr12 . CDS 1109806 1109829 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=28 chr12 . CDS 1109933 1109971 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=29 chr12 . CDS 1110155 1110178 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=30 chr12 . CDS 1110282 1110320 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=31 chr12 . CDS 1110395 1110507 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=32 chr12 . CDS 1110611 1110649 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=33 chr12 . CDS 1110769 1111272 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=34 chr12 . CDS 1111360 1111395 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=35 chr12 . CDS 1111482 1111517 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=36 chr12 . CDS 1111605 1111764 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=37 chr12 . CDS 1111841 1112246 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=38 chr12 . CDS 1112290 1112449 . + 0 ID=Thaps9277;Parent=Thaps9277;rank=39 chr12 . repeat_region 1114033 1114149 . - . description=Harbinger2N_TP chr12 . repeat_region 1114150 1114548 . - . description=Harbinger2N_TP chr12 . repeat_region 1114950 1115003 . - . description=MuDR1_TP chr12 . repeat_region 1116261 1116351 . - . description=Harbinger2N_TP chr12 . repeat_region 1116345 1116567 . - . description=Copia8I_TP chr12 . repeat_region 1116860 1116913 . - . description=MuDR1_TP chr12 . exon 1108614 1108635 . + . ID=Thaps9277.22;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=22 chr12 . exon 1108819 1108842 . + . ID=Thaps9277.23;Parent=Thaps9277;constitutive=1;rank=23 chr12 . exon 1108946 1108984 . + . ID=Thaps9277.24;Parent=Thaps9277;constitutive=1;rank=24 chr12 . exon 1109059 1109171 . + . ID=Thaps9277.25;Parent=Thaps9277;constitutive=1;ensembl_end_phase=2;rank=25 chr12 . exon 1109275 1109313 . + . ID=Thaps9277.26;Parent=Thaps9277;constitutive=1;rank=26 chr12 . exon 1109477 1109642 . + . ID=Thaps9277.27;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=27 chr12 . exon 1109806 1109829 . + . ID=Thaps9277.28;Parent=Thaps9277;constitutive=1;rank=28 chr12 . exon 1109933 1109971 . + . ID=Thaps9277.29;Parent=Thaps9277;constitutive=1;rank=29 chr12 . exon 1110155 1110178 . + . ID=Thaps9277.30;Parent=Thaps9277;constitutive=1;rank=30 chr12 . exon 1110282 1110320 . + . ID=Thaps9277.31;Parent=Thaps9277;constitutive=1;rank=31 chr12 . exon 1110395 1110507 . + . ID=Thaps9277.32;Parent=Thaps9277;constitutive=1;ensembl_end_phase=2;rank=32 chr12 . exon 1110611 1110649 . + . ID=Thaps9277.33;Parent=Thaps9277;constitutive=1;rank=33 chr12 . exon 1110769 1111272 . + . ID=Thaps9277.34;Parent=Thaps9277;constitutive=1;rank=34 chr12 . exon 1111360 1111395 . + . ID=Thaps9277.35;Parent=Thaps9277;constitutive=1;rank=35 chr12 . exon 1111482 1111517 . + . ID=Thaps9277.36;Parent=Thaps9277;constitutive=1;rank=36 chr12 . exon 1111605 1111764 . + . ID=Thaps9277.37;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=37 chr12 . exon 1111841 1112246 . + . ID=Thaps9277.38;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=38 chr12 . exon 1112290 1112449 . + . ID=Thaps9277.39;Parent=Thaps9277;constitutive=1;ensembl_end_phase=1;rank=39 chr12 ensembl protein_coding_gene 1113145 1113939 . + . ID=Thaps9278;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAV5];external_name=Thaps9278;logic_name=jgi_thaps3 chr12 ensembl transcript 1113145 1113939 . + . ID=Thaps9278;Parent=Thaps9278;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1113145 1113260 . + 0 ID=Thaps9278;Parent=Thaps9278;rank=1 chr12 . exon 1113145 1113260 . + . ID=Thaps9278.1;Parent=Thaps9278;constitutive=1;ensembl_end_phase=2;rank=1 chr12 . CDS 1113471 1113939 . + 0 ID=Thaps9278;Parent=Thaps9278;rank=2 chr12 . exon 1113471 1113939 . + . ID=Thaps9278.2;Parent=Thaps9278;constitutive=1;ensembl_end_phase=1;rank=2 chr12 ensembl protein_coding_gene 1117200 1118606 . + . ID=Thaps9279;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAV6];external_name=Thaps9279;logic_name=jgi_thaps3 chr12 ensembl transcript 1117200 1118606 . + . ID=Thaps9279;Parent=Thaps9279;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1117200 1118606 . + 0 ID=Thaps9279;Parent=Thaps9279;rank=1 chr12 . exon 1117200 1118606 . + . ID=Thaps9279.1;Parent=Thaps9279;constitutive=1;rank=1 chr12 . repeat_region 1118558 1118597 . ? . description=trf chr12 . repeat_region 1118672 1118799 . ? . description=dust chr12 . repeat_region 1118689 1118799 . ? . description=trf chr12 . repeat_region 1119461 1119468 . ? . description=dust chr12 . repeat_region 1119770 1119809 . ? . description=trf chr12 . repeat_region 1119893 1120019 . ? . description=dust chr12 . repeat_region 1119901 1120019 . ? . description=trf chr12 . repeat_region 1120990 1121029 . ? . description=trf chr12 . repeat_region 1121108 1121235 . ? . description=dust chr12 . repeat_region 1121121 1121239 . ? . description=trf chr12 . repeat_region 1121901 1121908 . ? . description=dust chr12 . repeat_region 1122210 1122249 . ? . description=trf chr12 . repeat_region 1122324 1122443 . ? . description=dust chr12 . repeat_region 1122341 1122443 . ? . description=trf chr12 . repeat_region 1123414 1123453 . ? . description=trf chr12 . repeat_region 1123541 1123647 . ? . description=dust chr12 . repeat_region 1123545 1123647 . ? . description=trf chr12 . repeat_region 1125518 1125526 . ? . description=dust chr12 . repeat_region 1125651 1125658 . ? . description=dust chr12 . repeat_region 1126209 1126241 . ? . description=trf chr12 . repeat_region 1126666 1126763 . ? . description=trf chr12 . repeat_region 1126849 1127267 . ? . description=trf chr12 . repeat_region 1126849 1127278 . ? . description=trf chr12 . repeat_region 1126853 1127267 . ? . description=trf chr12 . repeat_region 1127615 1127703 . ? . description=trf chr12 . repeat_region 1127637 1127734 . ? . description=trf chr12 . repeat_region 1127820 1128040 . ? . description=trf chr12 . repeat_region 1128041 1128382 . ? . description=dust chr12 . repeat_region 1128042 1128382 . ? . description=trf chr12 ensembl protein_coding_gene 1125639 1126139 . - . ID=Thaps9280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8CAV7];external_name=Thaps9280;logic_name=jgi_thaps3 chr12 ensembl transcript 1125639 1126139 . - . ID=Thaps9280;Parent=Thaps9280;biotype=protein_coding;logic_name=jgi_thaps3 chr12 . CDS 1125639 1126139 . - 0 ID=Thaps9280;Parent=Thaps9280;rank=1 chr12 . exon 1125639 1126139 . - . ID=Thaps9280.1;Parent=Thaps9280;constitutive=1;rank=1 ##gff-version 3 ##sequence-region 9 1 1191060 chr9 . repeat_region 1 162 . ? . description=trf chr9 . repeat_region 1 162 . ? . description=dust chr9 . repeat_region 2650 2688 . ? . description=trf chr9 . repeat_region 3499 3508 . ? . description=dust chr9 . repeat_region 4046 4105 . ? . description=dust chr9 . repeat_region 4046 4116 . ? . description=trf chr9 . repeat_region 4046 4118 . ? . description=trf chr9 . repeat_region 4333 4505 . ? . description=trf chr9 . repeat_region 7567 7625 . ? . description=dust chr9 ensembl protein_coding_gene 5567 9091 . - . ID=Thaps23895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N1];external_name=Thaps23895;logic_name=jgi_thaps3 chr9 ensembl transcript 5567 9091 . - . ID=Thaps23895;Parent=Thaps23895;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 5567 9091 . - 0 ID=Thaps23895;Parent=Thaps23895;rank=1 chr9 . exon 5567 9091 . - . ID=Thaps23895.1;Parent=Thaps23895;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 287 2679 . - . ID=Thaps7833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N0];external_name=Thaps7833;logic_name=jgi_thaps3 chr9 ensembl transcript 287 2679 . - . ID=Thaps7833;Parent=Thaps7833;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 287 359 . - 0 ID=Thaps7833;Parent=Thaps7833;rank=3 chr9 . exon 287 359 . - . ID=Thaps7833.3;Parent=Thaps7833;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 427 1729 . - 0 ID=Thaps7833;Parent=Thaps7833;rank=2 chr9 . exon 427 1729 . - . ID=Thaps7833.2;Parent=Thaps7833;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1803 2679 . - 0 ID=Thaps7833;Parent=Thaps7833;rank=1 chr9 . exon 1803 2679 . - . ID=Thaps7833.1;Parent=Thaps7833;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 10351 12340 . - . ID=Thaps23896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N2];external_name=Thaps23896;logic_name=jgi_thaps3 chr9 ensembl transcript 10351 12340 . - . ID=Thaps23896;Parent=Thaps23896;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 10351 11072 . - 0 ID=Thaps23896;Parent=Thaps23896;rank=2 chr9 . exon 10351 11072 . - . ID=Thaps23896.2;Parent=Thaps23896;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 11287 12340 . - 0 ID=Thaps23896;Parent=Thaps23896;rank=1 chr9 . exon 11287 12340 . - . ID=Thaps23896.1;Parent=Thaps23896;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 13437 16649 . + . ID=Thaps263473;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N3];external_name=Thaps263473;logic_name=jgi_thaps3 chr9 ensembl transcript 13437 16649 . + . ID=Thaps263473;Parent=Thaps263473;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 13437 14409 . + 0 ID=Thaps263473;Parent=Thaps263473;rank=1 chr9 . exon 13437 14409 . + . ID=Thaps263473.1;Parent=Thaps263473;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 14638 14866 . + 0 ID=Thaps263473;Parent=Thaps263473;rank=2 chr9 . exon 14638 14866 . + . ID=Thaps263473.2;Parent=Thaps263473;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 14952 15010 . + 0 ID=Thaps263473;Parent=Thaps263473;rank=3 chr9 . exon 14952 15010 . + . ID=Thaps263473.3;Parent=Thaps263473;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 15118 15210 . + 0 ID=Thaps263473;Parent=Thaps263473;rank=4 chr9 . exon 15118 15210 . + . ID=Thaps263473.4;Parent=Thaps263473;constitutive=1;rank=4 chr9 . CDS 15259 15557 . + 0 ID=Thaps263473;Parent=Thaps263473;rank=5 chr9 . exon 15259 15557 . + . ID=Thaps263473.5;Parent=Thaps263473;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 15647 15778 . + 0 ID=Thaps263473;Parent=Thaps263473;rank=6 chr9 . exon 15647 15778 . + . ID=Thaps263473.6;Parent=Thaps263473;constitutive=1;rank=6 chr9 . CDS 15797 16649 . + 0 ID=Thaps263473;Parent=Thaps263473;rank=7 chr9 . exon 15797 16649 . + . ID=Thaps263473.7;Parent=Thaps263473;constitutive=1;ensembl_end_phase=1;rank=7 chr9 ensembl protein_coding_gene 17125 17739 . + . ID=Thaps7837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N4];external_name=Thaps7837;logic_name=jgi_thaps3 chr9 ensembl transcript 17125 17739 . + . ID=Thaps7837;Parent=Thaps7837;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 17125 17739 . + 0 ID=Thaps7837;Parent=Thaps7837;rank=1 chr9 . exon 17125 17739 . + . ID=Thaps7837.1;Parent=Thaps7837;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 20262 21152 . - . ID=Thaps7838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N5];external_name=Thaps7838;logic_name=jgi_thaps3 chr9 ensembl transcript 20262 21152 . - . ID=Thaps7838;Parent=Thaps7838;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 20262 21152 . - 0 ID=Thaps7838;Parent=Thaps7838;rank=1 chr9 . exon 20262 21152 . - . ID=Thaps7838.1;Parent=Thaps7838;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 22312 25025 . + . ID=Thaps7839;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N6];external_name=Thaps7839;logic_name=jgi_thaps3 chr9 ensembl transcript 22312 25025 . + . ID=Thaps7839;Parent=Thaps7839;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 22312 23964 . + 0 ID=Thaps7839;Parent=Thaps7839;rank=1 chr9 . exon 22312 23964 . + . ID=Thaps7839.1;Parent=Thaps7839;constitutive=1;rank=1 chr9 . CDS 24062 24442 . + 0 ID=Thaps7839;Parent=Thaps7839;rank=2 chr9 . exon 24062 24442 . + . ID=Thaps7839.2;Parent=Thaps7839;constitutive=1;rank=2 chr9 . CDS 24519 25025 . + 0 ID=Thaps7839;Parent=Thaps7839;rank=3 chr9 . exon 24519 25025 . + . ID=Thaps7839.3;Parent=Thaps7839;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 25189 29949 . + . ID=Thaps7840;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N7];external_name=Thaps7840;logic_name=jgi_thaps3 chr9 ensembl transcript 25189 29949 . + . ID=Thaps7840;Parent=Thaps7840;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 25189 28042 . + 0 ID=Thaps7840;Parent=Thaps7840;rank=1 chr9 . exon 25189 28042 . + . ID=Thaps7840.1;Parent=Thaps7840;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 28119 28163 . + 0 ID=Thaps7840;Parent=Thaps7840;rank=2 chr9 . exon 28119 28163 . + . ID=Thaps7840.2;Parent=Thaps7840;constitutive=1;rank=2 chr9 . CDS 28187 28351 . + 0 ID=Thaps7840;Parent=Thaps7840;rank=3 chr9 . exon 28187 28351 . + . ID=Thaps7840.3;Parent=Thaps7840;constitutive=1;rank=3 chr9 . CDS 28434 28575 . + 0 ID=Thaps7840;Parent=Thaps7840;rank=4 chr9 . exon 28434 28575 . + . ID=Thaps7840.4;Parent=Thaps7840;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 28686 29949 . + 0 ID=Thaps7840;Parent=Thaps7840;rank=5 chr9 . exon 28686 29949 . + . ID=Thaps7840.5;Parent=Thaps7840;constitutive=1;ensembl_end_phase=1;rank=5 chr9 ensembl protein_coding_gene 30267 33164 . + . ID=Thaps23897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N8];external_name=Thaps23897;logic_name=jgi_thaps3 chr9 ensembl transcript 30267 33164 . + . ID=Thaps23897;Parent=Thaps23897;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 30267 33164 . + 0 ID=Thaps23897;Parent=Thaps23897;rank=1 chr9 . exon 30267 33164 . + . ID=Thaps23897.1;Parent=Thaps23897;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 36562 40956 . - . ID=Thaps23898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P0];external_name=Thaps23898;logic_name=jgi_thaps3 chr9 ensembl transcript 36562 40956 . - . ID=Thaps23898;Parent=Thaps23898;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 36562 40956 . - 0 ID=Thaps23898;Parent=Thaps23898;rank=1 chr9 . exon 36562 40956 . - . ID=Thaps23898.1;Parent=Thaps23898;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 33815 36380 . + . ID=Thaps7842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7N9];external_name=Thaps7842;logic_name=jgi_thaps3 chr9 ensembl transcript 33815 36380 . + . ID=Thaps7842;Parent=Thaps7842;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 33815 34004 . + 0 ID=Thaps7842;Parent=Thaps7842;rank=1 chr9 . exon 33815 34004 . + . ID=Thaps7842.1;Parent=Thaps7842;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 34239 34614 . + 0 ID=Thaps7842;Parent=Thaps7842;rank=2 chr9 . exon 34239 34614 . + . ID=Thaps7842.2;Parent=Thaps7842;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 34707 35993 . + 0 ID=Thaps7842;Parent=Thaps7842;rank=3 chr9 . exon 34707 35993 . + . ID=Thaps7842.3;Parent=Thaps7842;constitutive=1;rank=3 chr9 . CDS 36017 36380 . + 0 ID=Thaps7842;Parent=Thaps7842;rank=4 chr9 . exon 36017 36380 . + . ID=Thaps7842.4;Parent=Thaps7842;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . repeat_region 45654 45703 . ? . description=trf chr9 ensembl protein_coding_gene 41470 43795 . - . ID=Thaps7844;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P1];external_name=Thaps7844;logic_name=jgi_thaps3 chr9 ensembl transcript 41470 43795 . - . ID=Thaps7844;Parent=Thaps7844;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 41470 41765 . - 0 ID=Thaps7844;Parent=Thaps7844;rank=7 chr9 . exon 41470 41765 . - . ID=Thaps7844.7;Parent=Thaps7844;constitutive=1;ensembl_end_phase=2;rank=7 chr9 . CDS 41864 41986 . - 0 ID=Thaps7844;Parent=Thaps7844;rank=6 chr9 . exon 41864 41986 . - . ID=Thaps7844.6;Parent=Thaps7844;constitutive=1;rank=6 chr9 . CDS 42103 42244 . - 0 ID=Thaps7844;Parent=Thaps7844;rank=5 chr9 . exon 42103 42244 . - . ID=Thaps7844.5;Parent=Thaps7844;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 42476 42499 . - 0 ID=Thaps7844;Parent=Thaps7844;rank=4 chr9 . exon 42476 42499 . - . ID=Thaps7844.4;Parent=Thaps7844;constitutive=1;rank=4 chr9 . CDS 42591 42614 . - 0 ID=Thaps7844;Parent=Thaps7844;rank=3 chr9 . exon 42591 42614 . - . ID=Thaps7844.3;Parent=Thaps7844;constitutive=1;rank=3 chr9 . CDS 42715 43122 . - 0 ID=Thaps7844;Parent=Thaps7844;rank=2 chr9 . exon 42715 43122 . - . ID=Thaps7844.2;Parent=Thaps7844;constitutive=1;rank=2 chr9 . CDS 43208 43795 . - 0 ID=Thaps7844;Parent=Thaps7844;rank=1 chr9 . exon 43208 43795 . - . ID=Thaps7844.1;Parent=Thaps7844;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 45296 46979 . - . ID=Thaps7845;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P2];external_name=Thaps7845;logic_name=jgi_thaps3 chr9 ensembl transcript 45296 46979 . - . ID=Thaps7845;Parent=Thaps7845;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 45296 46691 . - 0 ID=Thaps7845;Parent=Thaps7845;rank=2 chr9 . exon 45296 46691 . - . ID=Thaps7845.2;Parent=Thaps7845;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 46945 46979 . - 0 ID=Thaps7845;Parent=Thaps7845;rank=1 chr9 . exon 46945 46979 . - . ID=Thaps7845.1;Parent=Thaps7845;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 47746 50425 . + . ID=Thaps7846;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P3];external_name=Thaps7846;logic_name=jgi_thaps3 chr9 ensembl transcript 47746 50425 . + . ID=Thaps7846;Parent=Thaps7846;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 47746 47946 . + 0 ID=Thaps7846;Parent=Thaps7846;rank=1 chr9 . exon 47746 47946 . + . ID=Thaps7846.1;Parent=Thaps7846;constitutive=1;rank=1 chr9 . CDS 48022 48674 . + 0 ID=Thaps7846;Parent=Thaps7846;rank=2 chr9 . exon 48022 48674 . + . ID=Thaps7846.2;Parent=Thaps7846;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 48763 48904 . + 0 ID=Thaps7846;Parent=Thaps7846;rank=3 chr9 . exon 48763 48904 . + . ID=Thaps7846.3;Parent=Thaps7846;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 48998 49286 . + 0 ID=Thaps7846;Parent=Thaps7846;rank=4 chr9 . exon 48998 49286 . + . ID=Thaps7846.4;Parent=Thaps7846;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 49363 49473 . + 0 ID=Thaps7846;Parent=Thaps7846;rank=5 chr9 . exon 49363 49473 . + . ID=Thaps7846.5;Parent=Thaps7846;constitutive=1;rank=5 chr9 . CDS 49589 49816 . + 0 ID=Thaps7846;Parent=Thaps7846;rank=6 chr9 . exon 49589 49816 . + . ID=Thaps7846.6;Parent=Thaps7846;constitutive=1;rank=6 chr9 . CDS 49923 50425 . + 0 ID=Thaps7846;Parent=Thaps7846;rank=7 chr9 . repeat_region 53555 53575 . ? . description=dust chr9 . biological_region 57354 57355 0.999 - . logic_name=eponine chr9 ensembl protein_coding_gene 50774 51685 . + . ID=Thaps23899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P4];external_name=Thaps23899;logic_name=jgi_thaps3 chr9 ensembl transcript 50774 51685 . + . ID=Thaps23899;Parent=Thaps23899;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 50774 51685 . + 0 ID=Thaps23899;Parent=Thaps23899;rank=1 chr9 . exon 50774 51685 . + . ID=Thaps23899.1;Parent=Thaps23899;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 53231 55333 . + . ID=Thaps23900;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P5];external_name=Thaps23900;logic_name=jgi_thaps3 chr9 ensembl transcript 53231 55333 . + . ID=Thaps23900;Parent=Thaps23900;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 53231 55333 . + 0 ID=Thaps23900;Parent=Thaps23900;rank=1 chr9 . exon 53231 55333 . + . ID=Thaps23900.1;Parent=Thaps23900;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 57644 58723 . + . ID=Thaps23901;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P7];external_name=Thaps23901;logic_name=jgi_thaps3 chr9 ensembl transcript 57644 58723 . + . ID=Thaps23901;Parent=Thaps23901;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 57644 58723 . + 0 ID=Thaps23901;Parent=Thaps23901;rank=1 chr9 . exon 57644 58723 . + . ID=Thaps23901.1;Parent=Thaps23901;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 55423 56770 . - . ID=Thaps263475;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P6];external_name=Thaps263475;logic_name=jgi_thaps3 chr9 ensembl transcript 55423 56770 . - . ID=Thaps263475;Parent=Thaps263475;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 55423 56770 . - 0 ID=Thaps263475;Parent=Thaps263475;rank=1 chr9 . exon 55423 56770 . - . ID=Thaps263475.1;Parent=Thaps263475;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . exon 49923 50425 . + . ID=Thaps7846.7;Parent=Thaps7846;constitutive=1;ensembl_end_phase=2;rank=7 chr9 ensembl protein_coding_gene 59374 60258 . - . ID=Thaps7850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P8];external_name=Thaps7850;logic_name=jgi_thaps3 chr9 ensembl transcript 59374 60258 . - . ID=Thaps7850;Parent=Thaps7850;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 59374 60258 . - 0 ID=Thaps7850;Parent=Thaps7850;rank=1 chr9 . exon 59374 60258 . - . ID=Thaps7850.1;Parent=Thaps7850;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 61506 63932 . - . ID=Thaps23902;biotype=protein_coding;description=Putative uncharacterized protein CLPB1 [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q0];external_name=CLPB1;logic_name=jgi_thaps3 chr9 ensembl transcript 61506 63932 . - . ID=Thaps23902;Parent=Thaps23902;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 61506 63932 . - 0 ID=Thaps23902;Parent=Thaps23902;rank=1 chr9 . exon 61506 63932 . - . ID=Thaps23902.1;Parent=Thaps23902;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 66672 68069 . + . ID=Thaps23903;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q2];external_name=Thaps23903;logic_name=jgi_thaps3 chr9 ensembl transcript 66672 68069 . + . ID=Thaps23903;Parent=Thaps23903;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 66672 68069 . + 0 ID=Thaps23903;Parent=Thaps23903;rank=1 chr9 . exon 66672 68069 . + . ID=Thaps23903.1;Parent=Thaps23903;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 60616 61213 . - . ID=Thaps7851;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7P9];external_name=Thaps7851;logic_name=jgi_thaps3 chr9 ensembl transcript 60616 61213 . - . ID=Thaps7851;Parent=Thaps7851;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 60616 60735 . - 0 ID=Thaps7851;Parent=Thaps7851;rank=2 chr9 . exon 60616 60735 . - . ID=Thaps7851.2;Parent=Thaps7851;constitutive=1;rank=2 chr9 . CDS 60794 61213 . - 0 ID=Thaps7851;Parent=Thaps7851;rank=1 chr9 . exon 60794 61213 . - . ID=Thaps7851.1;Parent=Thaps7851;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 65103 66308 . - . ID=Thaps7853;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q1];external_name=Thaps7853;logic_name=jgi_thaps3 chr9 ensembl transcript 65103 66308 . - . ID=Thaps7853;Parent=Thaps7853;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 65103 66308 . - 0 ID=Thaps7853;Parent=Thaps7853;rank=1 chr9 . exon 65103 66308 . - . ID=Thaps7853.1;Parent=Thaps7853;constitutive=1;rank=1 chr9 . repeat_region 78732 78751 . ? . description=trf chr9 . repeat_region 78732 78751 . ? . description=dust chr9 ensembl protein_coding_gene 70292 72274 . - . ID=Thaps23904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q3];external_name=Thaps23904;logic_name=jgi_thaps3 chr9 ensembl transcript 70292 72274 . - . ID=Thaps23904;Parent=Thaps23904;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 70292 71170 . - 0 ID=Thaps23904;Parent=Thaps23904;rank=3 chr9 . exon 70292 71170 . - . ID=Thaps23904.3;Parent=Thaps23904;constitutive=1;rank=3 chr9 . CDS 71279 71332 . - 0 ID=Thaps23904;Parent=Thaps23904;rank=2 chr9 . exon 71279 71332 . - . ID=Thaps23904.2;Parent=Thaps23904;constitutive=1;rank=2 chr9 . CDS 71426 72274 . - 0 ID=Thaps23904;Parent=Thaps23904;rank=1 chr9 . exon 71426 72274 . - . ID=Thaps23904.1;Parent=Thaps23904;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 74689 77604 . - . ID=Thaps23906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q4];external_name=Thaps23906;logic_name=jgi_thaps3 chr9 ensembl transcript 74689 77604 . - . ID=Thaps23906;Parent=Thaps23906;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 74689 77604 . - 0 ID=Thaps23906;Parent=Thaps23906;rank=1 chr9 . exon 74689 77604 . - . ID=Thaps23906.1;Parent=Thaps23906;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 78432 80108 . + . ID=Thaps23907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q5];external_name=Thaps23907;logic_name=jgi_thaps3 chr9 ensembl transcript 78432 80108 . + . ID=Thaps23907;Parent=Thaps23907;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 78432 80108 . + 0 ID=Thaps23907;Parent=Thaps23907;rank=1 chr9 . exon 78432 80108 . + . ID=Thaps23907.1;Parent=Thaps23907;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 82328 85054 . - . ID=Thaps23908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q7];external_name=Thaps23908;logic_name=jgi_thaps3 chr9 ensembl transcript 82328 85054 . - . ID=Thaps23908;Parent=Thaps23908;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 82328 83032 . - 0 ID=Thaps23908;Parent=Thaps23908;rank=2 chr9 . exon 82328 83032 . - . ID=Thaps23908.2;Parent=Thaps23908;constitutive=1;rank=2 chr9 . CDS 83105 85054 . - 0 ID=Thaps23908;Parent=Thaps23908;rank=1 chr9 . exon 83105 85054 . - . ID=Thaps23908.1;Parent=Thaps23908;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 85495 86994 . - . ID=Thaps269399;biotype=protein_coding;description=Seryl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q8];external_name=Thaps269399;logic_name=jgi_thaps3 chr9 ensembl transcript 85495 86994 . - . ID=Thaps269399;Parent=Thaps269399;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 85495 86994 . - 0 ID=Thaps269399;Parent=Thaps269399;rank=1 chr9 . exon 85495 86994 . - . ID=Thaps269399.1;Parent=Thaps269399;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 87646 89499 . + . ID=Thaps269400;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q9];external_name=Thaps269400;logic_name=jgi_thaps3 chr9 ensembl transcript 87646 89499 . + . ID=Thaps269400;Parent=Thaps269400;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 87646 87903 . + 0 ID=Thaps269400;Parent=Thaps269400;rank=1 chr9 . exon 87646 87903 . + . ID=Thaps269400.1;Parent=Thaps269400;constitutive=1;rank=1 chr9 . CDS 88207 88582 . + 0 ID=Thaps269400;Parent=Thaps269400;rank=2 chr9 . exon 88207 88582 . + . ID=Thaps269400.2;Parent=Thaps269400;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 88664 89175 . + 0 ID=Thaps269400;Parent=Thaps269400;rank=3 chr9 . exon 88664 89175 . + . ID=Thaps269400.3;Parent=Thaps269400;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 89254 89499 . + 0 ID=Thaps269400;Parent=Thaps269400;rank=4 chr9 . exon 89254 89499 . + . ID=Thaps269400.4;Parent=Thaps269400;constitutive=1;rank=4 chr9 ensembl protein_coding_gene 81157 81576 . - . ID=Thaps7859;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Q6];external_name=Thaps7859;logic_name=jgi_thaps3 chr9 ensembl transcript 81157 81576 . - . ID=Thaps7859;Parent=Thaps7859;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 81157 81576 . - 0 ID=Thaps7859;Parent=Thaps7859;rank=1 chr9 . exon 81157 81576 . - . ID=Thaps7859.1;Parent=Thaps7859;constitutive=1;rank=1 chr9 . repeat_region 90996 91016 . ? . description=trf chr9 . biological_region 91312 91315 0.999 + . logic_name=eponine chr9 . repeat_region 93628 93653 . ? . description=trf chr9 . repeat_region 93681 93755 . + . description=Harbinger2_TP chr9 . repeat_region 93845 93852 . ? . description=dust chr9 . repeat_region 94801 94828 . ? . description=trf chr9 . repeat_region 97666 101104 . - . description=Harbinger2_TP chr9 . repeat_region 97700 97713 . ? . description=dust chr9 . repeat_region 97716 97723 . ? . description=dust chr9 . repeat_region 97775 97782 . ? . description=dust chr9 . repeat_region 97860 97894 . ? . description=trf chr9 . repeat_region 97913 97981 . ? . description=trf chr9 ensembl protein_coding_gene 91320 92879 . + . ID=Thaps23911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R1];external_name=Thaps23911;logic_name=jgi_thaps3 chr9 ensembl transcript 91320 92879 . + . ID=Thaps23911;Parent=Thaps23911;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 91320 92879 . + 0 ID=Thaps23911;Parent=Thaps23911;rank=1 chr9 . exon 91320 92879 . + . ID=Thaps23911.1;Parent=Thaps23911;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 89642 90880 . - . ID=Thaps7863;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R0];external_name=Thaps7863;logic_name=jgi_thaps3 chr9 ensembl transcript 89642 90880 . - . ID=Thaps7863;Parent=Thaps7863;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 89642 90880 . - 0 ID=Thaps7863;Parent=Thaps7863;rank=1 chr9 . exon 89642 90880 . - . ID=Thaps7863.1;Parent=Thaps7863;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 95274 97057 . + . ID=Thaps7865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R2];external_name=Thaps7865;logic_name=jgi_thaps3 chr9 ensembl transcript 95274 97057 . + . ID=Thaps7865;Parent=Thaps7865;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 95274 96176 . + 0 ID=Thaps7865;Parent=Thaps7865;rank=1 chr9 . exon 95274 96176 . + . ID=Thaps7865.1;Parent=Thaps7865;constitutive=1;rank=1 chr9 . CDS 96272 96358 . + 0 ID=Thaps7865;Parent=Thaps7865;rank=2 chr9 . exon 96272 96358 . + . ID=Thaps7865.2;Parent=Thaps7865;constitutive=1;rank=2 chr9 . CDS 96446 97057 . + 0 ID=Thaps7865;Parent=Thaps7865;rank=3 chr9 . exon 96446 97057 . + . ID=Thaps7865.3;Parent=Thaps7865;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 102957 105373 . - . ID=Thaps263480;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R3];external_name=Thaps263480;logic_name=jgi_thaps3 chr9 ensembl transcript 102957 105373 . - . ID=Thaps263480;Parent=Thaps263480;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 102957 103113 . - 0 ID=Thaps263480;Parent=Thaps263480;rank=7 chr9 . exon 102957 103113 . - . ID=Thaps263480.7;Parent=Thaps263480;constitutive=1;ensembl_end_phase=1;rank=7 chr9 . CDS 103197 103379 . - 0 ID=Thaps263480;Parent=Thaps263480;rank=6 chr9 . exon 103197 103379 . - . ID=Thaps263480.6;Parent=Thaps263480;constitutive=1;rank=6 chr9 . CDS 103463 103683 . - 0 ID=Thaps263480;Parent=Thaps263480;rank=5 chr9 . exon 103463 103683 . - . ID=Thaps263480.5;Parent=Thaps263480;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 103768 104250 . - 0 ID=Thaps263480;Parent=Thaps263480;rank=4 chr9 . exon 103768 104250 . - . ID=Thaps263480.4;Parent=Thaps263480;constitutive=1;rank=4 chr9 . CDS 104294 104305 . - 0 ID=Thaps263480;Parent=Thaps263480;rank=3 chr9 . exon 104294 104305 . - . ID=Thaps263480.3;Parent=Thaps263480;constitutive=1;rank=3 chr9 . CDS 104320 105019 . - 0 ID=Thaps263480;Parent=Thaps263480;rank=2 chr9 . exon 104320 105019 . - . ID=Thaps263480.2;Parent=Thaps263480;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 105080 105373 . - 0 ID=Thaps263480;Parent=Thaps263480;rank=1 chr9 . exon 105080 105373 . - . ID=Thaps263480.1;Parent=Thaps263480;constitutive=1;rank=1 chr9 . repeat_region 110353 110360 . ? . description=dust chr9 ensembl protein_coding_gene 116652 120807 . + . ID=Thaps23915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R6];external_name=Thaps23915;logic_name=jgi_thaps3 chr9 ensembl transcript 116652 120807 . + . ID=Thaps23915;Parent=Thaps23915;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 116652 116944 . + 0 ID=Thaps23915;Parent=Thaps23915;rank=1 chr9 . exon 116652 116944 . + . ID=Thaps23915.1;Parent=Thaps23915;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 117225 119000 . + 0 ID=Thaps23915;Parent=Thaps23915;rank=2 chr9 . exon 117225 119000 . + . ID=Thaps23915.2;Parent=Thaps23915;constitutive=1;rank=2 chr9 . CDS 119192 119319 . + 0 ID=Thaps23915;Parent=Thaps23915;rank=3 chr9 . CDS 119454 119787 . + 0 ID=Thaps23915;Parent=Thaps23915;rank=4 chr9 . CDS 119842 120183 . + 0 ID=Thaps23915;Parent=Thaps23915;rank=5 chr9 . CDS 120378 120807 . + 0 ID=Thaps23915;Parent=Thaps23915;rank=6 chr9 ensembl protein_coding_gene 111341 112069 . + . ID=Thaps269403;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R4];external_name=Thaps269403;logic_name=jgi_thaps3 chr9 ensembl transcript 111341 112069 . + . ID=Thaps269403;Parent=Thaps269403;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 111341 111711 . + 0 ID=Thaps269403;Parent=Thaps269403;rank=1 chr9 . exon 111341 111711 . + . ID=Thaps269403.1;Parent=Thaps269403;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 111883 112069 . + 0 ID=Thaps269403;Parent=Thaps269403;rank=2 chr9 . exon 111883 112069 . + . ID=Thaps269403.2;Parent=Thaps269403;constitutive=1;ensembl_end_phase=1;rank=2 chr9 ensembl protein_coding_gene 112302 115320 . - . ID=Thaps7868;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R5];external_name=Thaps7868;logic_name=jgi_thaps3 chr9 ensembl transcript 112302 115320 . - . ID=Thaps7868;Parent=Thaps7868;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 112302 113729 . - 0 ID=Thaps7868;Parent=Thaps7868;rank=2 chr9 . exon 112302 113729 . - . ID=Thaps7868.2;Parent=Thaps7868;constitutive=1;rank=2 chr9 . CDS 113812 115320 . - 0 ID=Thaps7868;Parent=Thaps7868;rank=1 chr9 . exon 113812 115320 . - . ID=Thaps7868.1;Parent=Thaps7868;constitutive=1;rank=1 chr9 . repeat_region 120599 120756 . ? . description=trf chr9 . exon 119192 119319 . + . ID=Thaps23915.3;Parent=Thaps23915;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . exon 119454 119787 . + . ID=Thaps23915.4;Parent=Thaps23915;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . exon 119842 120183 . + . ID=Thaps23915.5;Parent=Thaps23915;constitutive=1;rank=5 chr9 . exon 120378 120807 . + . ID=Thaps23915.6;Parent=Thaps23915;constitutive=1;ensembl_end_phase=1;rank=6 chr9 ensembl protein_coding_gene 123389 127677 . - . ID=Thaps23916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R8];external_name=Thaps23916;logic_name=jgi_thaps3 chr9 ensembl transcript 123389 127677 . - . ID=Thaps23916;Parent=Thaps23916;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 123389 124173 . - 0 ID=Thaps23916;Parent=Thaps23916;rank=3 chr9 . exon 123389 124173 . - . ID=Thaps23916.3;Parent=Thaps23916;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 124608 124758 . - 0 ID=Thaps23916;Parent=Thaps23916;rank=2 chr9 . exon 124608 124758 . - . ID=Thaps23916.2;Parent=Thaps23916;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 124972 127677 . - 0 ID=Thaps23916;Parent=Thaps23916;rank=1 chr9 . exon 124972 127677 . - . ID=Thaps23916.1;Parent=Thaps23916;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 121943 122755 . + . ID=Thaps7870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R7];external_name=Thaps7870;logic_name=jgi_thaps3 chr9 ensembl transcript 121943 122755 . + . ID=Thaps7870;Parent=Thaps7870;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 121943 122755 . + 0 ID=Thaps7870;Parent=Thaps7870;rank=1 chr9 . exon 121943 122755 . + . ID=Thaps7870.1;Parent=Thaps7870;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 128718 130159 . - . ID=Thaps7872;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7R9];external_name=Thaps7872;logic_name=jgi_thaps3 chr9 ensembl transcript 128718 130159 . - . ID=Thaps7872;Parent=Thaps7872;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 128718 129516 . - 0 ID=Thaps7872;Parent=Thaps7872;rank=3 chr9 . exon 128718 129516 . - . ID=Thaps7872.3;Parent=Thaps7872;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 129642 129841 . - 0 ID=Thaps7872;Parent=Thaps7872;rank=2 chr9 . CDS 129986 130159 . - 0 ID=Thaps7872;Parent=Thaps7872;rank=1 chr9 . repeat_region 130517 130632 . - . description=MuDR1_TP chr9 ensembl protein_coding_gene 136126 137120 . + . ID=Thaps263482;biotype=protein_coding;description=DNA repair enzyme [Source:UniProtKB/TrEMBL%3BAcc:B8C7S2];external_name=Thaps263482;logic_name=jgi_thaps3 chr9 ensembl transcript 136126 137120 . + . ID=Thaps263482;Parent=Thaps263482;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 136126 136341 . + 0 ID=Thaps263482;Parent=Thaps263482;rank=1 chr9 . exon 136126 136341 . + . ID=Thaps263482.1;Parent=Thaps263482;constitutive=1;rank=1 chr9 . CDS 136415 137120 . + 0 ID=Thaps263482;Parent=Thaps263482;rank=2 chr9 . exon 136415 137120 . + . ID=Thaps263482.2;Parent=Thaps263482;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . exon 129642 129841 . - . ID=Thaps7872.2;Parent=Thaps7872;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . exon 129986 130159 . - . ID=Thaps7872.1;Parent=Thaps7872;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 130651 132069 . + . ID=Thaps7873;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7S0];external_name=Thaps7873;logic_name=jgi_thaps3 chr9 ensembl transcript 130651 132069 . + . ID=Thaps7873;Parent=Thaps7873;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 130651 132069 . + 0 ID=Thaps7873;Parent=Thaps7873;rank=1 chr9 . exon 130651 132069 . + . ID=Thaps7873.1;Parent=Thaps7873;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 132235 133086 . - . ID=Thaps7874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7S1];external_name=Thaps7874;logic_name=jgi_thaps3 chr9 ensembl transcript 132235 133086 . - . ID=Thaps7874;Parent=Thaps7874;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 132235 133086 . - 0 ID=Thaps7874;Parent=Thaps7874;rank=1 chr9 . exon 132235 133086 . - . ID=Thaps7874.1;Parent=Thaps7874;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 138951 145624 . + . ID=Thaps7876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7S3];external_name=Thaps7876;logic_name=jgi_thaps3 chr9 ensembl transcript 138951 145624 . + . ID=Thaps7876;Parent=Thaps7876;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 138951 140671 . + 0 ID=Thaps7876;Parent=Thaps7876;rank=1 chr9 . exon 138951 140671 . + . ID=Thaps7876.1;Parent=Thaps7876;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 140814 143322 . + 0 ID=Thaps7876;Parent=Thaps7876;rank=2 chr9 . CDS 143397 144392 . + 0 ID=Thaps7876;Parent=Thaps7876;rank=3 chr9 . CDS 144476 145624 . + 0 ID=Thaps7876;Parent=Thaps7876;rank=4 chr9 . repeat_region 139233 139251 . ? . description=dust chr9 . repeat_region 139395 139414 . ? . description=trf chr9 . repeat_region 139395 139414 . ? . description=dust chr9 . repeat_region 139872 139906 . ? . description=trf chr9 . repeat_region 139872 139933 . ? . description=dust chr9 . repeat_region 140777 140827 . ? . description=trf chr9 . repeat_region 140777 140827 . ? . description=dust chr9 ensembl protein_coding_gene 146773 147259 . - . ID=Thaps263483;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7S4];external_name=Thaps263483;logic_name=jgi_thaps3 chr9 ensembl transcript 146773 147259 . - . ID=Thaps263483;Parent=Thaps263483;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 146773 147259 . - 0 ID=Thaps263483;Parent=Thaps263483;rank=1 chr9 . exon 146773 147259 . - . ID=Thaps263483.1;Parent=Thaps263483;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . exon 140814 143322 . + . ID=Thaps7876.2;Parent=Thaps7876;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . exon 143397 144392 . + . ID=Thaps7876.3;Parent=Thaps7876;constitutive=1;rank=3 chr9 . exon 144476 145624 . + . ID=Thaps7876.4;Parent=Thaps7876;constitutive=1;rank=4 chr9 ensembl protein_coding_gene 157777 158658 . + . ID=Thaps23918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7S9];external_name=Thaps23918;logic_name=jgi_thaps3 chr9 ensembl transcript 157777 158658 . + . ID=Thaps23918;Parent=Thaps23918;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 157777 158658 . + 0 ID=Thaps23918;Parent=Thaps23918;rank=1 chr9 . exon 157777 158658 . + . ID=Thaps23918.1;Parent=Thaps23918;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 151450 151923 . + . ID=Thaps36206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7S6];external_name=Thaps36206;logic_name=jgi_thaps3 chr9 ensembl transcript 151450 151923 . + . ID=Thaps36206;Parent=Thaps36206;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 151450 151923 . + 0 ID=Thaps36206;Parent=Thaps36206;rank=1 chr9 . exon 151450 151923 . + . ID=Thaps36206.1;Parent=Thaps36206;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 149526 150602 . + . ID=Thaps7878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7S5];external_name=Thaps7878;logic_name=jgi_thaps3 chr9 ensembl transcript 149526 150602 . + . ID=Thaps7878;Parent=Thaps7878;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 149526 150602 . + 0 ID=Thaps7878;Parent=Thaps7878;rank=1 chr9 . exon 149526 150602 . + . ID=Thaps7878.1;Parent=Thaps7878;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 152409 154712 . - . ID=Thaps7880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7S7];external_name=Thaps7880;logic_name=jgi_thaps3 chr9 ensembl transcript 152409 154712 . - . ID=Thaps7880;Parent=Thaps7880;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 152409 152938 . - 0 ID=Thaps7880;Parent=Thaps7880;rank=4 chr9 . exon 152409 152938 . - . ID=Thaps7880.4;Parent=Thaps7880;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 152977 154137 . - 0 ID=Thaps7880;Parent=Thaps7880;rank=3 chr9 . exon 152977 154137 . - . ID=Thaps7880.3;Parent=Thaps7880;constitutive=1;rank=3 chr9 . CDS 154421 154554 . - 0 ID=Thaps7880;Parent=Thaps7880;rank=2 chr9 . exon 154421 154554 . - . ID=Thaps7880.2;Parent=Thaps7880;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 154675 154712 . - 0 ID=Thaps7880;Parent=Thaps7880;rank=1 chr9 . exon 154675 154712 . - . ID=Thaps7880.1;Parent=Thaps7880;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 155342 156226 . - . ID=Thaps7881;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7S8];external_name=Thaps7881;logic_name=jgi_thaps3 chr9 ensembl transcript 155342 156226 . - . ID=Thaps7881;Parent=Thaps7881;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 155342 156226 . - 0 ID=Thaps7881;Parent=Thaps7881;rank=1 chr9 . exon 155342 156226 . - . ID=Thaps7881.1;Parent=Thaps7881;constitutive=1;rank=1 chr9 . repeat_region 164405 164412 . ? . description=dust chr9 ensembl tRNA_gene 162501 162602 . - . ID=EPrTPOG00000000069;biotype=tRNA;description=tRNA-Arg for anticodon UCU [Source:TRNASCAN_SE%3BAcc:tRNA-Arg];external_name=tRNA-Arg;logic_name=ncrna_eg chr9 ensembl transcript 162501 162602 . - . ID=EPrTPOT00000000069;Parent=EPrTPOG00000000069;biotype=tRNA;logic_name=ncrna_eg chr9 . exon 162501 162602 . - . ID=EPrTPOE00000000069;Parent=EPrTPOT00000000069;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 159916 160818 . + . ID=Thaps7883;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7T0];external_name=Thaps7883;logic_name=jgi_thaps3 chr9 ensembl transcript 159916 160818 . + . ID=Thaps7883;Parent=Thaps7883;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 159916 160818 . + 0 ID=Thaps7883;Parent=Thaps7883;rank=1 chr9 . exon 159916 160818 . + . ID=Thaps7883.1;Parent=Thaps7883;constitutive=1;rank=1 chr9 . repeat_region 178128 178161 . ? . description=trf chr9 ensembl protein_coding_gene 171159 171824 . + . ID=Thaps18378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7T1];external_name=Thaps18378;logic_name=jgi_thaps3 chr9 ensembl transcript 171159 171824 . + . ID=Thaps18378;Parent=Thaps18378;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 171159 171824 . + 0 ID=Thaps18378;Parent=Thaps18378;rank=1 chr9 . exon 171159 171824 . + . ID=Thaps18378.1;Parent=Thaps18378;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 173999 174946 . - . ID=Thaps7885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7T2];external_name=Thaps7885;logic_name=jgi_thaps3 chr9 ensembl transcript 173999 174946 . - . ID=Thaps7885;Parent=Thaps7885;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 173999 174946 . - 0 ID=Thaps7885;Parent=Thaps7885;rank=1 chr9 . exon 173999 174946 . - . ID=Thaps7885.1;Parent=Thaps7885;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 175351 175899 . - . ID=Thaps7886;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7T3];external_name=Thaps7886;logic_name=jgi_thaps3 chr9 ensembl transcript 175351 175899 . - . ID=Thaps7886;Parent=Thaps7886;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 175351 175899 . - 0 ID=Thaps7886;Parent=Thaps7886;rank=1 chr9 . exon 175351 175899 . - . ID=Thaps7886.1;Parent=Thaps7886;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 176884 177854 . - . ID=Thaps7887;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7T4];external_name=Thaps7887;logic_name=jgi_thaps3 chr9 ensembl transcript 176884 177854 . - . ID=Thaps7887;Parent=Thaps7887;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 176884 177312 . - 0 ID=Thaps7887;Parent=Thaps7887;rank=3 chr9 . exon 176884 177312 . - . ID=Thaps7887.3;Parent=Thaps7887;constitutive=1;rank=3 chr9 . CDS 177456 177524 . - 0 ID=Thaps7887;Parent=Thaps7887;rank=2 chr9 . exon 177456 177524 . - . ID=Thaps7887.2;Parent=Thaps7887;constitutive=1;rank=2 chr9 . CDS 177732 177854 . - 0 ID=Thaps7887;Parent=Thaps7887;rank=1 chr9 . exon 177732 177854 . - . ID=Thaps7887.1;Parent=Thaps7887;constitutive=1;rank=1 chr9 . repeat_region 185057 185064 . ? . description=dust chr9 ensembl protein_coding_gene 180292 180846 . + . ID=Thaps263487;biotype=protein_coding;description=Pathogenesis-related transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B8C7T5];external_name=Thaps263487;logic_name=jgi_thaps3 chr9 ensembl transcript 180292 180846 . + . ID=Thaps263487;Parent=Thaps263487;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 180292 180488 . + 0 ID=Thaps263487;Parent=Thaps263487;rank=1 chr9 . exon 180292 180488 . + . ID=Thaps263487.1;Parent=Thaps263487;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 180543 180604 . + 0 ID=Thaps263487;Parent=Thaps263487;rank=2 chr9 . exon 180543 180604 . + . ID=Thaps263487.2;Parent=Thaps263487;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 180668 180846 . + 0 ID=Thaps263487;Parent=Thaps263487;rank=3 chr9 . exon 180668 180846 . + . ID=Thaps263487.3;Parent=Thaps263487;constitutive=1;ensembl_end_phase=2;rank=3 chr9 ensembl protein_coding_gene 186934 188494 . + . ID=Thaps263489;biotype=protein_coding;description=Platelet-activating factor acetylhydrolase beta subunit-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7T8];external_name=Thaps263489;logic_name=jgi_thaps3 chr9 ensembl transcript 186934 188494 . + . ID=Thaps263489;Parent=Thaps263489;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 186934 187621 . + 0 ID=Thaps263489;Parent=Thaps263489;rank=1 chr9 . exon 186934 187621 . + . ID=Thaps263489.1;Parent=Thaps263489;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 187715 187833 . + 0 ID=Thaps263489;Parent=Thaps263489;rank=2 chr9 . exon 187715 187833 . + . ID=Thaps263489.2;Parent=Thaps263489;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 187885 188289 . + 0 ID=Thaps263489;Parent=Thaps263489;rank=3 chr9 . exon 187885 188289 . + . ID=Thaps263489.3;Parent=Thaps263489;constitutive=1;rank=3 chr9 . CDS 188365 188494 . + 0 ID=Thaps263489;Parent=Thaps263489;rank=4 chr9 . exon 188365 188494 . + . ID=Thaps263489.4;Parent=Thaps263489;constitutive=1;ensembl_end_phase=1;rank=4 chr9 ensembl protein_coding_gene 184082 184846 . + . ID=Thaps7889;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7T6];external_name=Thaps7889;logic_name=jgi_thaps3 chr9 ensembl transcript 184082 184846 . + . ID=Thaps7889;Parent=Thaps7889;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 184082 184846 . + 0 ID=Thaps7889;Parent=Thaps7889;rank=1 chr9 . exon 184082 184846 . + . ID=Thaps7889.1;Parent=Thaps7889;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 185273 186334 . + . ID=Thaps7890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7T7];external_name=Thaps7890;logic_name=jgi_thaps3 chr9 ensembl transcript 185273 186334 . + . ID=Thaps7890;Parent=Thaps7890;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 185273 185369 . + 0 ID=Thaps7890;Parent=Thaps7890;rank=1 chr9 . exon 185273 185369 . + . ID=Thaps7890.1;Parent=Thaps7890;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 185524 185732 . + 0 ID=Thaps7890;Parent=Thaps7890;rank=2 chr9 . exon 185524 185732 . + . ID=Thaps7890.2;Parent=Thaps7890;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 185841 185906 . + 0 ID=Thaps7890;Parent=Thaps7890;rank=3 chr9 . exon 185841 185906 . + . ID=Thaps7890.3;Parent=Thaps7890;constitutive=1;rank=3 chr9 . CDS 186021 186173 . + 0 ID=Thaps7890;Parent=Thaps7890;rank=4 chr9 . exon 186021 186173 . + . ID=Thaps7890.4;Parent=Thaps7890;constitutive=1;rank=4 chr9 . CDS 186278 186334 . + 0 ID=Thaps7890;Parent=Thaps7890;rank=5 chr9 . exon 186278 186334 . + . ID=Thaps7890.5;Parent=Thaps7890;constitutive=1;rank=5 chr9 . repeat_region 194435 194459 . ? . description=trf chr9 ensembl protein_coding_gene 188690 193238 . - . ID=Thaps23922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7T9];external_name=Thaps23922;logic_name=jgi_thaps3 chr9 ensembl transcript 188690 193238 . - . ID=Thaps23922;Parent=Thaps23922;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 188690 188841 . - 0 ID=Thaps23922;Parent=Thaps23922;rank=3 chr9 . exon 188690 188841 . - . ID=Thaps23922.3;Parent=Thaps23922;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 188881 193030 . - 0 ID=Thaps23922;Parent=Thaps23922;rank=2 chr9 . exon 188881 193030 . - . ID=Thaps23922.2;Parent=Thaps23922;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 193113 193238 . - 0 ID=Thaps23922;Parent=Thaps23922;rank=1 chr9 . exon 193113 193238 . - . ID=Thaps23922.1;Parent=Thaps23922;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 195853 196026 . - . ID=Thaps263491;biotype=protein_coding;description=Pathogenesis-related transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B8C7U1];external_name=Thaps263491;logic_name=jgi_thaps3 chr9 ensembl transcript 195853 196026 . - . ID=Thaps263491;Parent=Thaps263491;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 195853 196026 . - 0 ID=Thaps263491;Parent=Thaps263491;rank=1 chr9 . exon 195853 196026 . - . ID=Thaps263491.1;Parent=Thaps263491;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 196244 196758 . - . ID=Thaps263492;biotype=protein_coding;description=Pathogenesis-related transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B8C7U2];external_name=Thaps263492;logic_name=jgi_thaps3 chr9 ensembl transcript 196244 196758 . - . ID=Thaps263492;Parent=Thaps263492;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 196244 196482 . - 0 ID=Thaps263492;Parent=Thaps263492;rank=2 chr9 . exon 196244 196482 . - . ID=Thaps263492.2;Parent=Thaps263492;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 196528 196758 . - 0 ID=Thaps263492;Parent=Thaps263492;rank=1 chr9 . exon 196528 196758 . - . ID=Thaps263492.1;Parent=Thaps263492;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 193805 194471 . + . ID=Thaps36099;biotype=protein_coding;description=NifU like N terminal domain%2C iron [Source:UniProtKB/TrEMBL%3BAcc:B8C7U0];external_name=Thaps36099;logic_name=jgi_thaps3 chr9 ensembl transcript 193805 194471 . + . ID=Thaps36099;Parent=Thaps36099;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 193805 193894 . + 0 ID=Thaps36099;Parent=Thaps36099;rank=1 chr9 . exon 193805 193894 . + . ID=Thaps36099.1;Parent=Thaps36099;constitutive=1;rank=1 chr9 . CDS 194061 194099 . + 0 ID=Thaps36099;Parent=Thaps36099;rank=2 chr9 . exon 194061 194099 . + . ID=Thaps36099.2;Parent=Thaps36099;constitutive=1;rank=2 chr9 . CDS 194199 194471 . + 0 ID=Thaps36099;Parent=Thaps36099;rank=3 chr9 . exon 194199 194471 . + . ID=Thaps36099.3;Parent=Thaps36099;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 200475 202095 . - . ID=Thaps13459;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7U4];external_name=Thaps13459;logic_name=jgi_thaps3 chr9 ensembl transcript 200475 202095 . - . ID=Thaps13459;Parent=Thaps13459;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 200475 201008 . - 0 ID=Thaps13459;Parent=Thaps13459;rank=5 chr9 . exon 200475 201008 . - . ID=Thaps13459.5;Parent=Thaps13459;constitutive=1;rank=5 chr9 . CDS 201097 201276 . - 0 ID=Thaps13459;Parent=Thaps13459;rank=4 chr9 . exon 201097 201276 . - . ID=Thaps13459.4;Parent=Thaps13459;constitutive=1;rank=4 chr9 . CDS 201377 201509 . - 0 ID=Thaps13459;Parent=Thaps13459;rank=3 chr9 . exon 201377 201509 . - . ID=Thaps13459.3;Parent=Thaps13459;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 201590 201636 . - 0 ID=Thaps13459;Parent=Thaps13459;rank=2 chr9 . exon 201590 201636 . - . ID=Thaps13459.2;Parent=Thaps13459;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 201946 202095 . - 0 ID=Thaps13459;Parent=Thaps13459;rank=1 chr9 . exon 201946 202095 . - . ID=Thaps13459.1;Parent=Thaps13459;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 204813 207544 . + . ID=Thaps263495;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7U5];external_name=Thaps263495;logic_name=jgi_thaps3 chr9 ensembl transcript 204813 207544 . + . ID=Thaps263495;Parent=Thaps263495;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 204813 205065 . + 0 ID=Thaps263495;Parent=Thaps263495;rank=1 chr9 . exon 204813 205065 . + . ID=Thaps263495.1;Parent=Thaps263495;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 205159 205317 . + 0 ID=Thaps263495;Parent=Thaps263495;rank=2 chr9 . exon 205159 205317 . + . ID=Thaps263495.2;Parent=Thaps263495;constitutive=1;rank=2 chr9 . CDS 205369 205601 . + 0 ID=Thaps263495;Parent=Thaps263495;rank=3 chr9 . exon 205369 205601 . + . ID=Thaps263495.3;Parent=Thaps263495;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 205659 205794 . + 0 ID=Thaps263495;Parent=Thaps263495;rank=4 chr9 . exon 205659 205794 . + . ID=Thaps263495.4;Parent=Thaps263495;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 205921 206119 . + 0 ID=Thaps263495;Parent=Thaps263495;rank=5 chr9 . exon 205921 206119 . + . ID=Thaps263495.5;Parent=Thaps263495;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 206451 207109 . + 0 ID=Thaps263495;Parent=Thaps263495;rank=6 chr9 . exon 206451 207109 . + . ID=Thaps263495.6;Parent=Thaps263495;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 207206 207544 . + 0 ID=Thaps263495;Parent=Thaps263495;rank=7 chr9 . exon 207206 207544 . + . ID=Thaps263495.7;Parent=Thaps263495;constitutive=1;rank=7 chr9 ensembl protein_coding_gene 198902 200044 . + . ID=Thaps7895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7U3];external_name=Thaps7895;logic_name=jgi_thaps3 chr9 ensembl transcript 198902 200044 . + . ID=Thaps7895;Parent=Thaps7895;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 198902 198961 . + 0 ID=Thaps7895;Parent=Thaps7895;rank=1 chr9 . exon 198902 198961 . + . ID=Thaps7895.1;Parent=Thaps7895;constitutive=1;rank=1 chr9 . CDS 199058 200044 . + 0 ID=Thaps7895;Parent=Thaps7895;rank=2 chr9 . exon 199058 200044 . + . ID=Thaps7895.2;Parent=Thaps7895;constitutive=1;rank=2 chr9 . repeat_region 208469 208481 . ? . description=dust chr9 . repeat_region 211053 211081 . ? . description=trf chr9 . repeat_region 211498 211578 . ? . description=dust chr9 . repeat_region 215015 215069 . ? . description=dust chr9 . repeat_region 215068 215114 . ? . description=trf chr9 . repeat_region 215160 215183 . ? . description=trf chr9 ensembl tRNA_gene 210882 210953 . + . ID=EPrTPOG00000000097;biotype=tRNA;description=tRNA-Ala for anticodon CGC [Source:TRNASCAN_SE%3BAcc:tRNA-Ala];external_name=tRNA-Ala;logic_name=ncrna_eg chr9 ensembl transcript 210882 210953 . + . ID=EPrTPOT00000000097;Parent=EPrTPOG00000000097;biotype=tRNA;logic_name=ncrna_eg chr9 . exon 210882 210953 . + . ID=EPrTPOE00000000097;Parent=EPrTPOT00000000097;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 217072 218748 . + . ID=Thaps23927;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7U9];external_name=Thaps23927;logic_name=jgi_thaps3 chr9 ensembl transcript 217072 218748 . + . ID=Thaps23927;Parent=Thaps23927;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 217072 217479 . + 0 ID=Thaps23927;Parent=Thaps23927;rank=1 chr9 . exon 217072 217479 . + . ID=Thaps23927.1;Parent=Thaps23927;constitutive=1;rank=1 chr9 . CDS 217570 218748 . + 0 ID=Thaps23927;Parent=Thaps23927;rank=2 chr9 . exon 217570 218748 . + . ID=Thaps23927.2;Parent=Thaps23927;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 211762 212691 . + . ID=Thaps36137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7U7];external_name=Thaps36137;logic_name=jgi_thaps3 chr9 ensembl transcript 211762 212691 . + . ID=Thaps36137;Parent=Thaps36137;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 211762 212166 . + 0 ID=Thaps36137;Parent=Thaps36137;rank=1 chr9 . exon 211762 212166 . + . ID=Thaps36137.1;Parent=Thaps36137;constitutive=1;rank=1 chr9 . CDS 212461 212691 . + 0 ID=Thaps36137;Parent=Thaps36137;rank=2 chr9 . exon 212461 212691 . + . ID=Thaps36137.2;Parent=Thaps36137;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 208840 210711 . + . ID=Thaps7898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7U6];external_name=Thaps7898;logic_name=jgi_thaps3 chr9 ensembl transcript 208840 210711 . + . ID=Thaps7898;Parent=Thaps7898;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 208840 210711 . + 0 ID=Thaps7898;Parent=Thaps7898;rank=1 chr9 . exon 208840 210711 . + . ID=Thaps7898.1;Parent=Thaps7898;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 214139 216125 . + . ID=Thaps7900;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7U8];external_name=Thaps7900;logic_name=jgi_thaps3 chr9 ensembl transcript 214139 216125 . + . ID=Thaps7900;Parent=Thaps7900;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 214139 214501 . + 0 ID=Thaps7900;Parent=Thaps7900;rank=1 chr9 . exon 214139 214501 . + . ID=Thaps7900.1;Parent=Thaps7900;constitutive=1;rank=1 chr9 . CDS 214588 215805 . + 0 ID=Thaps7900;Parent=Thaps7900;rank=2 chr9 . exon 214588 215805 . + . ID=Thaps7900.2;Parent=Thaps7900;constitutive=1;rank=2 chr9 . CDS 215907 216125 . + 0 ID=Thaps7900;Parent=Thaps7900;rank=3 chr9 . exon 215907 216125 . + . ID=Thaps7900.3;Parent=Thaps7900;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 227672 229090 . - . ID=Thaps23929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V5];external_name=Thaps23929;logic_name=jgi_thaps3 chr9 ensembl transcript 227672 229090 . - . ID=Thaps23929;Parent=Thaps23929;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 227672 229090 . - 0 ID=Thaps23929;Parent=Thaps23929;rank=1 chr9 . exon 227672 229090 . - . ID=Thaps23929.1;Parent=Thaps23929;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 225558 226346 . - . ID=Thaps36273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V3];external_name=Thaps36273;logic_name=jgi_thaps3 chr9 ensembl transcript 225558 226346 . - . ID=Thaps36273;Parent=Thaps36273;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 225558 226346 . - 0 ID=Thaps36273;Parent=Thaps36273;rank=1 chr9 . exon 225558 226346 . - . ID=Thaps36273.1;Parent=Thaps36273;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 219224 219739 . - . ID=Thaps7902;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V0];external_name=Thaps7902;logic_name=jgi_thaps3 chr9 ensembl transcript 219224 219739 . - . ID=Thaps7902;Parent=Thaps7902;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 219224 219739 . - 0 ID=Thaps7902;Parent=Thaps7902;rank=1 chr9 . exon 219224 219739 . - . ID=Thaps7902.1;Parent=Thaps7902;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 220008 220556 . + . ID=Thaps7903;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V1];external_name=Thaps7903;logic_name=jgi_thaps3 chr9 ensembl transcript 220008 220556 . + . ID=Thaps7903;Parent=Thaps7903;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 220008 220556 . + 0 ID=Thaps7903;Parent=Thaps7903;rank=1 chr9 . exon 220008 220556 . + . ID=Thaps7903.1;Parent=Thaps7903;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 221947 223271 . + . ID=Thaps7904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V2];external_name=Thaps7904;logic_name=jgi_thaps3 chr9 ensembl transcript 221947 223271 . + . ID=Thaps7904;Parent=Thaps7904;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 221947 223227 . + 0 ID=Thaps7904;Parent=Thaps7904;rank=1 chr9 . exon 221947 223227 . + . ID=Thaps7904.1;Parent=Thaps7904;constitutive=1;rank=1 chr9 . CDS 223263 223271 . + 0 ID=Thaps7904;Parent=Thaps7904;rank=2 chr9 . exon 223263 223271 . + . ID=Thaps7904.2;Parent=Thaps7904;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 226527 227312 . + . ID=Thaps7906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V4];external_name=Thaps7906;logic_name=jgi_thaps3 chr9 ensembl transcript 226527 227312 . + . ID=Thaps7906;Parent=Thaps7906;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 226527 226976 . + 0 ID=Thaps7906;Parent=Thaps7906;rank=1 chr9 . exon 226527 226976 . + . ID=Thaps7906.1;Parent=Thaps7906;constitutive=1;rank=1 chr9 . CDS 227087 227219 . + 0 ID=Thaps7906;Parent=Thaps7906;rank=2 chr9 . exon 227087 227219 . + . ID=Thaps7906.2;Parent=Thaps7906;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 227278 227312 . + 0 ID=Thaps7906;Parent=Thaps7906;rank=3 chr9 . exon 227278 227312 . + . ID=Thaps7906.3;Parent=Thaps7906;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . repeat_region 230517 230567 . ? . description=dust chr9 . repeat_region 230651 230660 . ? . description=dust chr9 ensembl protein_coding_gene 235413 235664 . + . ID=Thaps16584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V9];external_name=Thaps16584;logic_name=jgi_thaps3 chr9 ensembl transcript 235413 235664 . + . ID=Thaps16584;Parent=Thaps16584;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 235413 235664 . + 0 ID=Thaps16584;Parent=Thaps16584;rank=1 chr9 . exon 235413 235664 . + . ID=Thaps16584.1;Parent=Thaps16584;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 231446 232576 . - . ID=Thaps23931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V7];external_name=Thaps23931;logic_name=jgi_thaps3 chr9 ensembl transcript 231446 232576 . - . ID=Thaps23931;Parent=Thaps23931;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 231446 232576 . - 0 ID=Thaps23931;Parent=Thaps23931;rank=1 chr9 . exon 231446 232576 . - . ID=Thaps23931.1;Parent=Thaps23931;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 236075 240432 . - . ID=Thaps23932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7W0];external_name=Thaps23932;logic_name=jgi_thaps3 chr9 ensembl transcript 236075 240432 . - . ID=Thaps23932;Parent=Thaps23932;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 236075 236428 . - 0 ID=Thaps23932;Parent=Thaps23932;rank=4 chr9 . exon 236075 236428 . - . ID=Thaps23932.4;Parent=Thaps23932;constitutive=1;rank=4 chr9 . CDS 236471 236944 . - 0 ID=Thaps23932;Parent=Thaps23932;rank=3 chr9 . exon 236471 236944 . - . ID=Thaps23932.3;Parent=Thaps23932;constitutive=1;rank=3 chr9 . CDS 237025 238385 . - 0 ID=Thaps23932;Parent=Thaps23932;rank=2 chr9 . exon 237025 238385 . - . ID=Thaps23932.2;Parent=Thaps23932;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 238575 240432 . - 0 ID=Thaps23932;Parent=Thaps23932;rank=1 chr9 ensembl protein_coding_gene 229630 230586 . + . ID=Thaps269412;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V6];external_name=Thaps269412;logic_name=jgi_thaps3 chr9 ensembl transcript 229630 230586 . + . ID=Thaps269412;Parent=Thaps269412;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 229630 230032 . + 0 ID=Thaps269412;Parent=Thaps269412;rank=1 chr9 . exon 229630 230032 . + . ID=Thaps269412.1;Parent=Thaps269412;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 230069 230586 . + 0 ID=Thaps269412;Parent=Thaps269412;rank=2 chr9 . exon 230069 230586 . + . ID=Thaps269412.2;Parent=Thaps269412;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 232961 235162 . + . ID=Thaps7910;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7V8];external_name=Thaps7910;logic_name=jgi_thaps3 chr9 ensembl transcript 232961 235162 . + . ID=Thaps7910;Parent=Thaps7910;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 232961 235162 . + 0 ID=Thaps7910;Parent=Thaps7910;rank=1 chr9 . exon 232961 235162 . + . ID=Thaps7910.1;Parent=Thaps7910;constitutive=1;rank=1 chr9 . repeat_region 238534 238564 . ? . description=trf chr9 . repeat_region 241105 241132 . ? . description=trf chr9 . repeat_region 241403 241455 . ? . description=trf chr9 . repeat_region 241409 241475 . ? . description=trf chr9 . exon 238575 240432 . - . ID=Thaps23932.1;Parent=Thaps23932;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 241099 245959 . + . ID=Thaps23933;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7W1];external_name=Thaps23933;logic_name=jgi_thaps3 chr9 ensembl transcript 241099 245959 . + . ID=Thaps23933;Parent=Thaps23933;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 241099 244460 . + 0 ID=Thaps23933;Parent=Thaps23933;rank=1 chr9 . exon 241099 244460 . + . ID=Thaps23933.1;Parent=Thaps23933;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 244552 245959 . + 0 ID=Thaps23933;Parent=Thaps23933;rank=2 chr9 . exon 244552 245959 . + . ID=Thaps23933.2;Parent=Thaps23933;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . repeat_region 249012 249019 . ? . description=dust chr9 ensembl protein_coding_gene 249552 251561 . + . ID=Thaps23934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7W3];external_name=Thaps23934;logic_name=jgi_thaps3 chr9 ensembl transcript 249552 251561 . + . ID=Thaps23934;Parent=Thaps23934;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 249552 251561 . + 0 ID=Thaps23934;Parent=Thaps23934;rank=1 chr9 . exon 249552 251561 . + . ID=Thaps23934.1;Parent=Thaps23934;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 251702 254104 . - . ID=Thaps23935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7W4];external_name=Thaps23935;logic_name=jgi_thaps3 chr9 ensembl transcript 251702 254104 . - . ID=Thaps23935;Parent=Thaps23935;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 251702 254104 . - 0 ID=Thaps23935;Parent=Thaps23935;rank=1 chr9 . exon 251702 254104 . - . ID=Thaps23935.1;Parent=Thaps23935;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 248335 248889 . + . ID=Thaps263499;biotype=protein_coding;description=Phosphatidate cytidylyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C7W2];external_name=Thaps263499;logic_name=jgi_thaps3 chr9 ensembl transcript 248335 248889 . + . ID=Thaps263499;Parent=Thaps263499;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 248335 248484 . + 0 ID=Thaps263499;Parent=Thaps263499;rank=1 chr9 . exon 248335 248484 . + . ID=Thaps263499.1;Parent=Thaps263499;constitutive=1;rank=1 chr9 . CDS 248524 248602 . + 0 ID=Thaps263499;Parent=Thaps263499;rank=2 chr9 . exon 248524 248602 . + . ID=Thaps263499.2;Parent=Thaps263499;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 248678 248889 . + 0 ID=Thaps263499;Parent=Thaps263499;rank=3 chr9 . exon 248678 248889 . + . ID=Thaps263499.3;Parent=Thaps263499;constitutive=1;ensembl_end_phase=2;rank=3 chr9 ensembl protein_coding_gene 254739 255703 . + . ID=Thaps7916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7W5];external_name=FCP_2;logic_name=jgi_thaps3 chr9 ensembl transcript 254739 255703 . + . ID=Thaps7916;Parent=Thaps7916;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 254739 254810 . + 0 ID=Thaps7916;Parent=Thaps7916;rank=1 chr9 . exon 254739 254810 . + . ID=Thaps7916.1;Parent=Thaps7916;constitutive=1;rank=1 chr9 . CDS 255050 255218 . + 0 ID=Thaps7916;Parent=Thaps7916;rank=2 chr9 . exon 255050 255218 . + . ID=Thaps7916.2;Parent=Thaps7916;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 255330 255703 . + 0 ID=Thaps7916;Parent=Thaps7916;rank=3 chr9 . exon 255330 255703 . + . ID=Thaps7916.3;Parent=Thaps7916;constitutive=1;ensembl_end_phase=2;rank=3 chr9 ensembl protein_coding_gene 257253 258182 . - . ID=Thaps7917;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7W6];external_name=Thaps7917;logic_name=jgi_thaps3 chr9 ensembl transcript 257253 258182 . - . ID=Thaps7917;Parent=Thaps7917;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 257253 258182 . - 0 ID=Thaps7917;Parent=Thaps7917;rank=1 chr9 . exon 257253 258182 . - . ID=Thaps7917.1;Parent=Thaps7917;constitutive=1;rank=1 chr9 . repeat_region 263180 263254 . - . description=Gypsy3LTR_TP chr9 . repeat_region 263682 263704 . ? . description=trf chr9 ensembl protein_coding_gene 263274 265385 . + . ID=Thaps23937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7W9];external_name=Thaps23937;logic_name=jgi_thaps3 chr9 ensembl transcript 263274 265385 . + . ID=Thaps23937;Parent=Thaps23937;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 263274 265385 . + 0 ID=Thaps23937;Parent=Thaps23937;rank=1 chr9 . exon 263274 265385 . + . ID=Thaps23937.1;Parent=Thaps23937;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 258734 261593 . + . ID=Thaps41687;biotype=protein_coding;description=Beta subunit of tetrameric clathrin adaptor complex AP1 [Source:UniProtKB/TrEMBL%3BAcc:B8C7W7];external_name=APB1;logic_name=jgi_thaps3 chr9 ensembl transcript 258734 261593 . + . ID=Thaps41687;Parent=Thaps41687;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 258734 258814 . + 0 ID=Thaps41687;Parent=Thaps41687;rank=1 chr9 . exon 258734 258814 . + . ID=Thaps41687.1;Parent=Thaps41687;constitutive=1;rank=1 chr9 . CDS 258912 261593 . + 0 ID=Thaps41687;Parent=Thaps41687;rank=2 chr9 . exon 258912 261593 . + . ID=Thaps41687.2;Parent=Thaps41687;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 261803 262756 . - . ID=Thaps7919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7W8];external_name=Thaps7919;logic_name=jgi_thaps3 chr9 ensembl transcript 261803 262756 . - . ID=Thaps7919;Parent=Thaps7919;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 261803 262756 . - 0 ID=Thaps7919;Parent=Thaps7919;rank=1 chr9 . exon 261803 262756 . - . ID=Thaps7919.1;Parent=Thaps7919;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 267174 268631 . + . ID=Thaps7921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X0];external_name=Thaps7921;logic_name=jgi_thaps3 chr9 ensembl transcript 267174 268631 . + . ID=Thaps7921;Parent=Thaps7921;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 267174 268631 . + 0 ID=Thaps7921;Parent=Thaps7921;rank=1 chr9 . exon 267174 268631 . + . ID=Thaps7921.1;Parent=Thaps7921;constitutive=1;rank=1 chr9 . repeat_region 272922 272933 . ? . description=dust chr9 ensembl protein_coding_gene 269099 270387 . + . ID=Thaps23938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X1];external_name=Thaps23938;logic_name=jgi_thaps3 chr9 ensembl transcript 269099 270387 . + . ID=Thaps23938;Parent=Thaps23938;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 269099 269169 . + 0 ID=Thaps23938;Parent=Thaps23938;rank=1 chr9 . exon 269099 269169 . + . ID=Thaps23938.1;Parent=Thaps23938;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 269263 269278 . + 0 ID=Thaps23938;Parent=Thaps23938;rank=2 chr9 . exon 269263 269278 . + . ID=Thaps23938.2;Parent=Thaps23938;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 269324 269725 . + 0 ID=Thaps23938;Parent=Thaps23938;rank=3 chr9 . exon 269324 269725 . + . ID=Thaps23938.3;Parent=Thaps23938;constitutive=1;rank=3 chr9 . CDS 269808 269959 . + 0 ID=Thaps23938;Parent=Thaps23938;rank=4 chr9 . exon 269808 269959 . + . ID=Thaps23938.4;Parent=Thaps23938;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 270066 270387 . + 0 ID=Thaps23938;Parent=Thaps23938;rank=5 chr9 . exon 270066 270387 . + . ID=Thaps23938.5;Parent=Thaps23938;constitutive=1;ensembl_end_phase=1;rank=5 chr9 ensembl protein_coding_gene 277713 282092 . + . ID=Thaps23939;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X4];external_name=Thaps23939;logic_name=jgi_thaps3 chr9 ensembl transcript 277713 282092 . + . ID=Thaps23939;Parent=Thaps23939;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 277713 279002 . + 0 ID=Thaps23939;Parent=Thaps23939;rank=1 chr9 . exon 277713 279002 . + . ID=Thaps23939.1;Parent=Thaps23939;constitutive=1;rank=1 chr9 . CDS 279105 282092 . + 0 ID=Thaps23939;Parent=Thaps23939;rank=2 chr9 ensembl protein_coding_gene 271551 272540 . - . ID=Thaps7924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X2];external_name=Thaps7924;logic_name=jgi_thaps3 chr9 ensembl transcript 271551 272540 . - . ID=Thaps7924;Parent=Thaps7924;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 271551 272540 . - 0 ID=Thaps7924;Parent=Thaps7924;rank=1 chr9 . exon 271551 272540 . - . ID=Thaps7924.1;Parent=Thaps7924;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 276413 276769 . + . ID=Thaps7926;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X3];external_name=Thaps7926;logic_name=jgi_thaps3 chr9 ensembl transcript 276413 276769 . + . ID=Thaps7926;Parent=Thaps7926;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 276413 276769 . + 0 ID=Thaps7926;Parent=Thaps7926;rank=1 chr9 . exon 276413 276769 . + . ID=Thaps7926.1;Parent=Thaps7926;constitutive=1;rank=1 chr9 . repeat_region 283597 283647 . ? . description=trf chr9 . exon 279105 282092 . + . ID=Thaps23939.2;Parent=Thaps23939;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 285346 287721 . - . ID=Thaps23940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X7];external_name=Thaps23940;logic_name=jgi_thaps3 chr9 ensembl transcript 285346 287721 . - . ID=Thaps23940;Parent=Thaps23940;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 285346 287721 . - 0 ID=Thaps23940;Parent=Thaps23940;rank=1 chr9 . exon 285346 287721 . - . ID=Thaps23940.1;Parent=Thaps23940;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 282572 283351 . - . ID=Thaps7928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X5];external_name=Thaps7928;logic_name=jgi_thaps3 chr9 ensembl transcript 282572 283351 . - . ID=Thaps7928;Parent=Thaps7928;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 282572 283351 . - 0 ID=Thaps7928;Parent=Thaps7928;rank=1 chr9 . exon 282572 283351 . - . ID=Thaps7928.1;Parent=Thaps7928;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 284462 285262 . + . ID=Thaps7929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X6];external_name=Thaps7929;logic_name=jgi_thaps3 chr9 ensembl transcript 284462 285262 . + . ID=Thaps7929;Parent=Thaps7929;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 284462 285262 . + 0 ID=Thaps7929;Parent=Thaps7929;rank=1 chr9 . exon 284462 285262 . + . ID=Thaps7929.1;Parent=Thaps7929;constitutive=1;rank=1 chr9 . repeat_region 294004 294067 . ? . description=dust chr9 ensembl protein_coding_gene 287930 289429 . - . ID=Thaps23941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X8];external_name=Thaps23941;logic_name=jgi_thaps3 chr9 ensembl transcript 287930 289429 . - . ID=Thaps23941;Parent=Thaps23941;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 287930 289429 . - 0 ID=Thaps23941;Parent=Thaps23941;rank=1 chr9 . exon 287930 289429 . - . ID=Thaps23941.1;Parent=Thaps23941;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 291647 294100 . - . ID=Thaps23942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7X9];external_name=Thaps23942;logic_name=jgi_thaps3 chr9 ensembl transcript 291647 294100 . - . ID=Thaps23942;Parent=Thaps23942;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 291647 294100 . - 0 ID=Thaps23942;Parent=Thaps23942;rank=1 chr9 . exon 291647 294100 . - . ID=Thaps23942.1;Parent=Thaps23942;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 295722 296765 . - . ID=Thaps269416;biotype=protein_coding;description=Zinc finger like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y0];external_name=ZFP4;logic_name=jgi_thaps3 chr9 ensembl transcript 295722 296765 . - . ID=Thaps269416;Parent=Thaps269416;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 295722 295951 . - 0 ID=Thaps269416;Parent=Thaps269416;rank=3 chr9 . exon 295722 295951 . - . ID=Thaps269416.3;Parent=Thaps269416;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 296060 296441 . - 0 ID=Thaps269416;Parent=Thaps269416;rank=2 chr9 . exon 296060 296441 . - . ID=Thaps269416.2;Parent=Thaps269416;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 296736 296765 . - 0 ID=Thaps269416;Parent=Thaps269416;rank=1 chr9 . exon 296736 296765 . - . ID=Thaps269416.1;Parent=Thaps269416;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 306072 307987 . + . ID=Thaps263504;biotype=protein_coding;description=Pas-domain protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y5];external_name=Thaps263504;logic_name=jgi_thaps3 chr9 ensembl transcript 306072 307987 . + . ID=Thaps263504;Parent=Thaps263504;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 306072 307185 . + 0 ID=Thaps263504;Parent=Thaps263504;rank=1 chr9 . exon 306072 307185 . + . ID=Thaps263504.1;Parent=Thaps263504;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 307225 307987 . + 0 ID=Thaps263504;Parent=Thaps263504;rank=2 chr9 . exon 307225 307987 . + . ID=Thaps263504.2;Parent=Thaps263504;constitutive=1;ensembl_end_phase=1;rank=2 chr9 ensembl protein_coding_gene 298628 299857 . - . ID=Thaps7934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y1];external_name=Thaps7934;logic_name=jgi_thaps3 chr9 ensembl transcript 298628 299857 . - . ID=Thaps7934;Parent=Thaps7934;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 298628 299857 . - 0 ID=Thaps7934;Parent=Thaps7934;rank=1 chr9 . exon 298628 299857 . - . ID=Thaps7934.1;Parent=Thaps7934;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 300212 301663 . - . ID=Thaps7935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y2];external_name=Thaps7935;logic_name=jgi_thaps3 chr9 ensembl transcript 300212 301663 . - . ID=Thaps7935;Parent=Thaps7935;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 300212 301663 . - 0 ID=Thaps7935;Parent=Thaps7935;rank=1 chr9 . exon 300212 301663 . - . ID=Thaps7935.1;Parent=Thaps7935;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 301982 303278 . + . ID=Thaps7936;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y3];external_name=Thaps7936;logic_name=jgi_thaps3 chr9 ensembl transcript 301982 303278 . + . ID=Thaps7936;Parent=Thaps7936;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 301982 302473 . + 0 ID=Thaps7936;Parent=Thaps7936;rank=1 chr9 . exon 301982 302473 . + . ID=Thaps7936.1;Parent=Thaps7936;constitutive=1;rank=1 chr9 . CDS 302563 302710 . + 0 ID=Thaps7936;Parent=Thaps7936;rank=2 chr9 . exon 302563 302710 . + . ID=Thaps7936.2;Parent=Thaps7936;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 302785 303278 . + 0 ID=Thaps7936;Parent=Thaps7936;rank=3 chr9 . exon 302785 303278 . + . ID=Thaps7936.3;Parent=Thaps7936;constitutive=1;ensembl_end_phase=2;rank=3 chr9 ensembl protein_coding_gene 303316 305733 . - . ID=Thaps7937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y4];external_name=Thaps7937;logic_name=jgi_thaps3 chr9 ensembl transcript 303316 305733 . - . ID=Thaps7937;Parent=Thaps7937;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 303316 303872 . - 0 ID=Thaps7937;Parent=Thaps7937;rank=2 chr9 . exon 303316 303872 . - . ID=Thaps7937.2;Parent=Thaps7937;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 303957 305733 . - 0 ID=Thaps7937;Parent=Thaps7937;rank=1 chr9 . exon 303957 305733 . - . ID=Thaps7937.1;Parent=Thaps7937;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . repeat_region 314457 314473 . ? . description=dust chr9 . repeat_region 315035 315053 . ? . description=dust chr9 ensembl protein_coding_gene 312698 314401 . - . ID=Thaps23944;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y9];external_name=Thaps23944;logic_name=jgi_thaps3 chr9 ensembl transcript 312698 314401 . - . ID=Thaps23944;Parent=Thaps23944;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 312698 314401 . - 0 ID=Thaps23944;Parent=Thaps23944;rank=1 chr9 . exon 312698 314401 . - . ID=Thaps23944.1;Parent=Thaps23944;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 308348 309577 . + . ID=Thaps263505;biotype=protein_coding;description=Guanylate cyclase [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y6];external_name=Thaps263505;logic_name=jgi_thaps3 chr9 ensembl transcript 308348 309577 . + . ID=Thaps263505;Parent=Thaps263505;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 308348 308422 . + 0 ID=Thaps263505;Parent=Thaps263505;rank=1 chr9 . exon 308348 308422 . + . ID=Thaps263505.1;Parent=Thaps263505;constitutive=1;rank=1 chr9 . CDS 308510 308633 . + 0 ID=Thaps263505;Parent=Thaps263505;rank=2 chr9 . exon 308510 308633 . + . ID=Thaps263505.2;Parent=Thaps263505;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 308670 308837 . + 0 ID=Thaps263505;Parent=Thaps263505;rank=3 chr9 . exon 308670 308837 . + . ID=Thaps263505.3;Parent=Thaps263505;constitutive=1;rank=3 chr9 . CDS 308924 309249 . + 0 ID=Thaps263505;Parent=Thaps263505;rank=4 chr9 . exon 308924 309249 . + . ID=Thaps263505.4;Parent=Thaps263505;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 309338 309577 . + 0 ID=Thaps263505;Parent=Thaps263505;rank=5 chr9 . exon 309338 309577 . + . ID=Thaps263505.5;Parent=Thaps263505;constitutive=1;rank=5 chr9 ensembl protein_coding_gene 310047 311522 . + . ID=Thaps7939;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y7];external_name=Thaps7939;logic_name=jgi_thaps3 chr9 ensembl transcript 310047 311522 . + . ID=Thaps7939;Parent=Thaps7939;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 310047 311522 . + 0 ID=Thaps7939;Parent=Thaps7939;rank=1 chr9 . exon 310047 311522 . + . ID=Thaps7939.1;Parent=Thaps7939;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 311703 312537 . + . ID=Thaps7940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Y8];external_name=Thaps7940;logic_name=jgi_thaps3 chr9 ensembl transcript 311703 312537 . + . ID=Thaps7940;Parent=Thaps7940;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 311703 311894 . + 0 ID=Thaps7940;Parent=Thaps7940;rank=1 chr9 . exon 311703 311894 . + . ID=Thaps7940.1;Parent=Thaps7940;constitutive=1;rank=1 chr9 . CDS 311953 312537 . + 0 ID=Thaps7940;Parent=Thaps7940;rank=2 chr9 . exon 311953 312537 . + . ID=Thaps7940.2;Parent=Thaps7940;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 315598 317964 . - . ID=Thaps7942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z0];external_name=Thaps7942;logic_name=jgi_thaps3 chr9 ensembl transcript 315598 317964 . - . ID=Thaps7942;Parent=Thaps7942;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 315598 317964 . - 0 ID=Thaps7942;Parent=Thaps7942;rank=1 chr9 . exon 315598 317964 . - . ID=Thaps7942.1;Parent=Thaps7942;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 323778 325742 . + . ID=Thaps23946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z2];external_name=Thaps23946;logic_name=jgi_thaps3 chr9 ensembl transcript 323778 325742 . + . ID=Thaps23946;Parent=Thaps23946;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 323778 325742 . + 0 ID=Thaps23946;Parent=Thaps23946;rank=1 chr9 . exon 323778 325742 . + . ID=Thaps23946.1;Parent=Thaps23946;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 318549 320763 . - . ID=Thaps41690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z1];external_name=Thaps41690;logic_name=jgi_thaps3 chr9 ensembl transcript 318549 320763 . - . ID=Thaps41690;Parent=Thaps41690;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 318549 319383 . - 0 ID=Thaps41690;Parent=Thaps41690;rank=3 chr9 . exon 318549 319383 . - . ID=Thaps41690.3;Parent=Thaps41690;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 319466 320448 . - 0 ID=Thaps41690;Parent=Thaps41690;rank=2 chr9 . exon 319466 320448 . - . ID=Thaps41690.2;Parent=Thaps41690;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 320539 320763 . - 0 ID=Thaps41690;Parent=Thaps41690;rank=1 chr9 . exon 320539 320763 . - . ID=Thaps41690.1;Parent=Thaps41690;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 325969 327692 . - . ID=Thaps7945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z3];external_name=Thaps7945;logic_name=jgi_thaps3 chr9 ensembl transcript 325969 327692 . - . ID=Thaps7945;Parent=Thaps7945;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 325969 325996 . - 0 ID=Thaps7945;Parent=Thaps7945;rank=2 chr9 . exon 325969 325996 . - . ID=Thaps7945.2;Parent=Thaps7945;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 326020 327692 . - 0 ID=Thaps7945;Parent=Thaps7945;rank=1 chr9 . exon 326020 327692 . - . ID=Thaps7945.1;Parent=Thaps7945;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 331206 336009 . - . ID=Thaps23947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z4];external_name=Thaps23947;logic_name=jgi_thaps3 chr9 ensembl transcript 331206 336009 . - . ID=Thaps23947;Parent=Thaps23947;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 331206 331294 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=11 chr9 . exon 331206 331294 . - . ID=Thaps23947.11;Parent=Thaps23947;constitutive=1;ensembl_end_phase=2;rank=11 chr9 . CDS 331380 332387 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=10 chr9 . exon 331380 332387 . - . ID=Thaps23947.10;Parent=Thaps23947;constitutive=1;rank=10 chr9 . CDS 332459 332847 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=9 chr9 . exon 332459 332847 . - . ID=Thaps23947.9;Parent=Thaps23947;constitutive=1;ensembl_end_phase=2;rank=9 chr9 . CDS 332930 333430 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=8 chr9 . exon 332930 333430 . - . ID=Thaps23947.8;Parent=Thaps23947;constitutive=1;rank=8 chr9 . CDS 333531 333864 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=7 chr9 . exon 333531 333864 . - . ID=Thaps23947.7;Parent=Thaps23947;constitutive=1;ensembl_end_phase=1;rank=7 chr9 . CDS 333945 334449 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=6 chr9 . exon 333945 334449 . - . ID=Thaps23947.6;Parent=Thaps23947;constitutive=1;ensembl_end_phase=1;rank=6 chr9 . CDS 334538 334653 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=5 chr9 . exon 334538 334653 . - . ID=Thaps23947.5;Parent=Thaps23947;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 334771 334916 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=4 chr9 . exon 334771 334916 . - . ID=Thaps23947.4;Parent=Thaps23947;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 334993 335235 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=3 chr9 . exon 334993 335235 . - . ID=Thaps23947.3;Parent=Thaps23947;constitutive=1;rank=3 chr9 . CDS 335356 335812 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=2 chr9 . exon 335356 335812 . - . ID=Thaps23947.2;Parent=Thaps23947;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 335937 336009 . - 0 ID=Thaps23947;Parent=Thaps23947;rank=1 chr9 . exon 335937 336009 . - . ID=Thaps23947.1;Parent=Thaps23947;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 336755 339956 . - . ID=Thaps23948;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z5];external_name=Thaps23948;logic_name=jgi_thaps3 chr9 ensembl transcript 336755 339956 . - . ID=Thaps23948;Parent=Thaps23948;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 336755 337255 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=10 chr9 . exon 336755 337255 . - . ID=Thaps23948.10;Parent=Thaps23948;constitutive=1;rank=10 chr9 . CDS 337332 337415 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=9 chr9 . exon 337332 337415 . - . ID=Thaps23948.9;Parent=Thaps23948;constitutive=1;rank=9 chr9 . CDS 337497 337689 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=8 chr9 . CDS 337777 338039 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=7 chr9 . CDS 338119 338186 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=6 chr9 . CDS 338267 338280 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=5 chr9 . CDS 338381 338733 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=4 chr9 . CDS 338820 339074 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=3 chr9 . CDS 339219 339567 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=2 chr9 . CDS 339679 339956 . - 0 ID=Thaps23948;Parent=Thaps23948;rank=1 chr9 . repeat_region 340421 340475 . ? . description=trf chr9 . repeat_region 346844 346943 . ? . description=trf chr9 . exon 337497 337689 . - . ID=Thaps23948.8;Parent=Thaps23948;constitutive=1;ensembl_end_phase=1;rank=8 chr9 . exon 337777 338039 . - . ID=Thaps23948.7;Parent=Thaps23948;constitutive=1;ensembl_end_phase=2;rank=7 chr9 . exon 338119 338186 . - . ID=Thaps23948.6;Parent=Thaps23948;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . exon 338267 338280 . - . ID=Thaps23948.5;Parent=Thaps23948;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . exon 338381 338733 . - . ID=Thaps23948.4;Parent=Thaps23948;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . exon 338820 339074 . - . ID=Thaps23948.3;Parent=Thaps23948;constitutive=1;rank=3 chr9 . exon 339219 339567 . - . ID=Thaps23948.2;Parent=Thaps23948;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . exon 339679 339956 . - . ID=Thaps23948.1;Parent=Thaps23948;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 340607 344561 . - . ID=Thaps23949;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z6];external_name=Thaps23949;logic_name=jgi_thaps3 chr9 ensembl transcript 340607 344561 . - . ID=Thaps23949;Parent=Thaps23949;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 340607 341358 . - 0 ID=Thaps23949;Parent=Thaps23949;rank=7 chr9 . exon 340607 341358 . - . ID=Thaps23949.7;Parent=Thaps23949;constitutive=1;ensembl_end_phase=2;rank=7 chr9 . CDS 341451 341670 . - 0 ID=Thaps23949;Parent=Thaps23949;rank=6 chr9 . exon 341451 341670 . - . ID=Thaps23949.6;Parent=Thaps23949;constitutive=1;ensembl_end_phase=1;rank=6 chr9 . CDS 341770 341925 . - 0 ID=Thaps23949;Parent=Thaps23949;rank=5 chr9 . exon 341770 341925 . - . ID=Thaps23949.5;Parent=Thaps23949;constitutive=1;rank=5 chr9 . CDS 342016 342945 . - 0 ID=Thaps23949;Parent=Thaps23949;rank=4 chr9 . exon 342016 342945 . - . ID=Thaps23949.4;Parent=Thaps23949;constitutive=1;rank=4 chr9 . CDS 343059 343604 . - 0 ID=Thaps23949;Parent=Thaps23949;rank=3 chr9 . exon 343059 343604 . - . ID=Thaps23949.3;Parent=Thaps23949;constitutive=1;rank=3 chr9 . CDS 343724 344135 . - 0 ID=Thaps23949;Parent=Thaps23949;rank=2 chr9 . exon 343724 344135 . - . ID=Thaps23949.2;Parent=Thaps23949;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 344245 344561 . - 0 ID=Thaps23949;Parent=Thaps23949;rank=1 chr9 . exon 344245 344561 . - . ID=Thaps23949.1;Parent=Thaps23949;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 345278 347518 . - . ID=Thaps7950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z7];external_name=Thaps7950;logic_name=jgi_thaps3 chr9 ensembl transcript 345278 347518 . - . ID=Thaps7950;Parent=Thaps7950;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 345278 345874 . - 0 ID=Thaps7950;Parent=Thaps7950;rank=6 chr9 . exon 345278 345874 . - . ID=Thaps7950.6;Parent=Thaps7950;constitutive=1;rank=6 chr9 . CDS 345958 346030 . - 0 ID=Thaps7950;Parent=Thaps7950;rank=5 chr9 . exon 345958 346030 . - . ID=Thaps7950.5;Parent=Thaps7950;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 346111 346250 . - 0 ID=Thaps7950;Parent=Thaps7950;rank=4 chr9 . exon 346111 346250 . - . ID=Thaps7950.4;Parent=Thaps7950;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 346328 346543 . - 0 ID=Thaps7950;Parent=Thaps7950;rank=3 chr9 . exon 346328 346543 . - . ID=Thaps7950.3;Parent=Thaps7950;constitutive=1;rank=3 chr9 . CDS 346615 347173 . - 0 ID=Thaps7950;Parent=Thaps7950;rank=2 chr9 . exon 346615 347173 . - . ID=Thaps7950.2;Parent=Thaps7950;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 347253 347518 . - 0 ID=Thaps7950;Parent=Thaps7950;rank=1 chr9 . exon 347253 347518 . - . ID=Thaps7950.1;Parent=Thaps7950;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 347689 351769 . - . ID=Thaps23950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z8];external_name=Thaps23950;logic_name=jgi_thaps3 chr9 ensembl transcript 347689 351769 . - . ID=Thaps23950;Parent=Thaps23950;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 347689 347818 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=11 chr9 . exon 347689 347818 . - . ID=Thaps23950.11;Parent=Thaps23950;constitutive=1;ensembl_end_phase=1;rank=11 chr9 . CDS 348031 348404 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=10 chr9 . exon 348031 348404 . - . ID=Thaps23950.10;Parent=Thaps23950;constitutive=1;ensembl_end_phase=2;rank=10 chr9 . CDS 348503 348537 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=9 chr9 . exon 348503 348537 . - . ID=Thaps23950.9;Parent=Thaps23950;constitutive=1;ensembl_end_phase=2;rank=9 chr9 . CDS 348641 349116 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=8 chr9 . exon 348641 349116 . - . ID=Thaps23950.8;Parent=Thaps23950;constitutive=1;ensembl_end_phase=2;rank=8 chr9 . CDS 349138 349172 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=7 chr9 . exon 349138 349172 . - . ID=Thaps23950.7;Parent=Thaps23950;constitutive=1;ensembl_end_phase=2;rank=7 chr9 . CDS 349731 349858 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=6 chr9 . exon 349731 349858 . - . ID=Thaps23950.6;Parent=Thaps23950;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 349970 350093 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=5 chr9 . exon 349970 350093 . - . ID=Thaps23950.5;Parent=Thaps23950;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 350301 350365 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=4 chr9 . exon 350301 350365 . - . ID=Thaps23950.4;Parent=Thaps23950;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 350420 350473 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=3 chr9 . exon 350420 350473 . - . ID=Thaps23950.3;Parent=Thaps23950;constitutive=1;rank=3 chr9 . CDS 350581 350704 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=2 chr9 . exon 350581 350704 . - . ID=Thaps23950.2;Parent=Thaps23950;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 350822 351769 . - 0 ID=Thaps23950;Parent=Thaps23950;rank=1 chr9 . exon 350822 351769 . - . ID=Thaps23950.1;Parent=Thaps23950;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 352147 353355 . + . ID=Thaps23951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7Z9];external_name=Thaps23951;logic_name=jgi_thaps3 chr9 ensembl transcript 352147 353355 . + . ID=Thaps23951;Parent=Thaps23951;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 352147 353355 . + 0 ID=Thaps23951;Parent=Thaps23951;rank=1 chr9 . exon 352147 353355 . + . ID=Thaps23951.1;Parent=Thaps23951;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 354672 357805 . + . ID=Thaps263509;biotype=protein_coding;description=Mlh1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C801];external_name=Thaps263509;logic_name=jgi_thaps3 chr9 ensembl transcript 354672 357805 . + . ID=Thaps263509;Parent=Thaps263509;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 354672 354790 . + 0 ID=Thaps263509;Parent=Thaps263509;rank=1 chr9 . exon 354672 354790 . + . ID=Thaps263509.1;Parent=Thaps263509;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 354895 355112 . + 0 ID=Thaps263509;Parent=Thaps263509;rank=2 chr9 . exon 354895 355112 . + . ID=Thaps263509.2;Parent=Thaps263509;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 355182 355520 . + 0 ID=Thaps263509;Parent=Thaps263509;rank=3 chr9 . exon 355182 355520 . + . ID=Thaps263509.3;Parent=Thaps263509;constitutive=1;rank=3 chr9 . CDS 355656 355748 . + 0 ID=Thaps263509;Parent=Thaps263509;rank=4 chr9 . exon 355656 355748 . + . ID=Thaps263509.4;Parent=Thaps263509;constitutive=1;rank=4 chr9 . CDS 356043 356696 . + 0 ID=Thaps263509;Parent=Thaps263509;rank=5 chr9 . exon 356043 356696 . + . ID=Thaps263509.5;Parent=Thaps263509;constitutive=1;rank=5 chr9 . CDS 356925 357244 . + 0 ID=Thaps263509;Parent=Thaps263509;rank=6 chr9 . exon 356925 357244 . + . ID=Thaps263509.6;Parent=Thaps263509;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 357299 357805 . + 0 ID=Thaps263509;Parent=Thaps263509;rank=7 chr9 . exon 357299 357805 . + . ID=Thaps263509.7;Parent=Thaps263509;constitutive=1;rank=7 chr9 ensembl protein_coding_gene 353404 354426 . - . ID=Thaps7953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C800];external_name=Thaps7953;logic_name=jgi_thaps3 chr9 ensembl transcript 353404 354426 . - . ID=Thaps7953;Parent=Thaps7953;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 353404 354426 . - 0 ID=Thaps7953;Parent=Thaps7953;rank=1 chr9 . exon 353404 354426 . - . ID=Thaps7953.1;Parent=Thaps7953;constitutive=1;rank=1 chr9 . repeat_region 359214 359262 . ? . description=trf chr9 . repeat_region 364392 364410 . ? . description=dust chr9 ensembl protein_coding_gene 362866 364968 . - . ID=Thaps23952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C805];external_name=Thaps23952;logic_name=jgi_thaps3 chr9 ensembl transcript 362866 364968 . - . ID=Thaps23952;Parent=Thaps23952;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 362866 362907 . - 0 ID=Thaps23952;Parent=Thaps23952;rank=2 chr9 . exon 362866 362907 . - . ID=Thaps23952.2;Parent=Thaps23952;constitutive=1;rank=2 chr9 . CDS 362986 364968 . - 0 ID=Thaps23952;Parent=Thaps23952;rank=1 chr9 . exon 362986 364968 . - . ID=Thaps23952.1;Parent=Thaps23952;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 365301 366473 . + . ID=Thaps23953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C806];external_name=Thaps23953;logic_name=jgi_thaps3 chr9 ensembl transcript 365301 366473 . + . ID=Thaps23953;Parent=Thaps23953;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 365301 366473 . + 0 ID=Thaps23953;Parent=Thaps23953;rank=1 chr9 . exon 365301 366473 . + . ID=Thaps23953.1;Parent=Thaps23953;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 366629 367699 . - . ID=Thaps263510;biotype=protein_coding;description=Spo11-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C807];external_name=Thaps263510;logic_name=jgi_thaps3 chr9 ensembl transcript 366629 367699 . - . ID=Thaps263510;Parent=Thaps263510;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 366629 367058 . - 0 ID=Thaps263510;Parent=Thaps263510;rank=3 chr9 . exon 366629 367058 . - . ID=Thaps263510.3;Parent=Thaps263510;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 367132 367259 . - 0 ID=Thaps263510;Parent=Thaps263510;rank=2 chr9 . exon 367132 367259 . - . ID=Thaps263510.2;Parent=Thaps263510;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 367442 367699 . - 0 ID=Thaps263510;Parent=Thaps263510;rank=1 chr9 ensembl protein_coding_gene 358590 359212 . - . ID=Thaps7955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C802];external_name=Thaps7955;logic_name=jgi_thaps3 chr9 ensembl transcript 358590 359212 . - . ID=Thaps7955;Parent=Thaps7955;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 358590 358783 . - 0 ID=Thaps7955;Parent=Thaps7955;rank=2 chr9 . exon 358590 358783 . - . ID=Thaps7955.2;Parent=Thaps7955;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 358885 359212 . - 0 ID=Thaps7955;Parent=Thaps7955;rank=1 chr9 . exon 358885 359212 . - . ID=Thaps7955.1;Parent=Thaps7955;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 359719 360747 . - . ID=Thaps7956;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C803];external_name=Thaps7956;logic_name=jgi_thaps3 chr9 ensembl transcript 359719 360747 . - . ID=Thaps7956;Parent=Thaps7956;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 359719 360183 . - 0 ID=Thaps7956;Parent=Thaps7956;rank=3 chr9 . exon 359719 360183 . - . ID=Thaps7956.3;Parent=Thaps7956;constitutive=1;rank=3 chr9 . CDS 360272 360477 . - 0 ID=Thaps7956;Parent=Thaps7956;rank=2 chr9 . exon 360272 360477 . - . ID=Thaps7956.2;Parent=Thaps7956;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 360585 360747 . - 0 ID=Thaps7956;Parent=Thaps7956;rank=1 chr9 . exon 360585 360747 . - . ID=Thaps7956.1;Parent=Thaps7956;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 360979 361909 . + . ID=Thaps7957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C804];external_name=Thaps7957;logic_name=jgi_thaps3 chr9 ensembl transcript 360979 361909 . + . ID=Thaps7957;Parent=Thaps7957;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 360979 361524 . + 0 ID=Thaps7957;Parent=Thaps7957;rank=1 chr9 . exon 360979 361524 . + . ID=Thaps7957.1;Parent=Thaps7957;constitutive=1;rank=1 chr9 . CDS 361664 361909 . + 0 ID=Thaps7957;Parent=Thaps7957;rank=2 chr9 . exon 361664 361909 . + . ID=Thaps7957.2;Parent=Thaps7957;constitutive=1;rank=2 chr9 . exon 367442 367699 . - . ID=Thaps263510.1;Parent=Thaps263510;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 371849 372780 . + . ID=Thaps263511;biotype=protein_coding;description=Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1%2C3-glucosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C808];external_name=Thaps263511;logic_name=jgi_thaps3 chr9 ensembl transcript 371849 372780 . + . ID=Thaps263511;Parent=Thaps263511;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 371849 372299 . + 0 ID=Thaps263511;Parent=Thaps263511;rank=1 chr9 . exon 371849 372299 . + . ID=Thaps263511.1;Parent=Thaps263511;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 372480 372780 . + 0 ID=Thaps263511;Parent=Thaps263511;rank=2 chr9 . exon 372480 372780 . + . ID=Thaps263511.2;Parent=Thaps263511;constitutive=1;ensembl_end_phase=1;rank=2 chr9 ensembl protein_coding_gene 375834 377204 . + . ID=Thaps36208;biotype=protein_coding;description=Aminomethyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C809];external_name=GDCT;logic_name=jgi_thaps3 chr9 ensembl transcript 375834 377204 . + . ID=Thaps36208;Parent=Thaps36208;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 375834 376522 . + 0 ID=Thaps36208;Parent=Thaps36208;rank=1 chr9 . exon 375834 376522 . + . ID=Thaps36208.1;Parent=Thaps36208;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 376637 377204 . + 0 ID=Thaps36208;Parent=Thaps36208;rank=2 chr9 . exon 376637 377204 . + . ID=Thaps36208.2;Parent=Thaps36208;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . repeat_region 383290 383347 . ? . description=trf chr9 . repeat_region 383290 383347 . ? . description=dust chr9 . repeat_region 383291 383354 . ? . description=trf chr9 . repeat_region 384718 384741 . ? . description=trf chr9 . repeat_region 384718 384741 . ? . description=dust chr9 ensembl protein_coding_gene 384280 385296 . + . ID=Thaps23954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C812];external_name=Thaps23954;logic_name=jgi_thaps3 chr9 ensembl transcript 384280 385296 . + . ID=Thaps23954;Parent=Thaps23954;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 384280 384378 . + 0 ID=Thaps23954;Parent=Thaps23954;rank=1 chr9 . exon 384280 384378 . + . ID=Thaps23954.1;Parent=Thaps23954;constitutive=1;rank=1 chr9 . CDS 384529 385296 . + 0 ID=Thaps23954;Parent=Thaps23954;rank=2 chr9 . exon 384529 385296 . + . ID=Thaps23954.2;Parent=Thaps23954;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 377364 382214 . - . ID=Thaps7963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C810];external_name=Thaps7963;logic_name=jgi_thaps3 chr9 ensembl transcript 377364 382214 . - . ID=Thaps7963;Parent=Thaps7963;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 377364 380372 . - 0 ID=Thaps7963;Parent=Thaps7963;rank=3 chr9 . exon 377364 380372 . - . ID=Thaps7963.3;Parent=Thaps7963;constitutive=1;rank=3 chr9 . CDS 380484 381841 . - 0 ID=Thaps7963;Parent=Thaps7963;rank=2 chr9 . exon 380484 381841 . - . ID=Thaps7963.2;Parent=Thaps7963;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 381959 382214 . - 0 ID=Thaps7963;Parent=Thaps7963;rank=1 chr9 . exon 381959 382214 . - . ID=Thaps7963.1;Parent=Thaps7963;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 383097 383818 . + . ID=Thaps7964;biotype=protein_coding;description=Proteasome subunit beta type 4 [Source:UniProtKB/TrEMBL%3BAcc:B8C811];external_name=PSB4;logic_name=jgi_thaps3 chr9 ensembl transcript 383097 383818 . + . ID=Thaps7964;Parent=Thaps7964;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 383097 383191 . + 0 ID=Thaps7964;Parent=Thaps7964;rank=1 chr9 . exon 383097 383191 . + . ID=Thaps7964.1;Parent=Thaps7964;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 383383 383818 . + 0 ID=Thaps7964;Parent=Thaps7964;rank=2 chr9 . exon 383383 383818 . + . ID=Thaps7964.2;Parent=Thaps7964;constitutive=1;ensembl_end_phase=1;rank=2 chr9 ensembl protein_coding_gene 395931 396947 . + . ID=Thaps105;biotype=protein_coding;description=Eukaryotic translation initiation factor 2 alpha subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C817];external_name=Thaps105;logic_name=jgi_thaps3 chr9 ensembl transcript 395931 396947 . + . ID=Thaps105;Parent=Thaps105;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 395931 396947 . + 0 ID=Thaps105;Parent=Thaps105;rank=1 chr9 . exon 395931 396947 . + . ID=Thaps105.1;Parent=Thaps105;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 391755 393293 . + . ID=Thaps14096;biotype=protein_coding;description=Ammonium transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C815];external_name=AMT3;logic_name=jgi_thaps3 chr9 ensembl transcript 391755 393293 . + . ID=Thaps14096;Parent=Thaps14096;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 391755 391806 . + 0 ID=Thaps14096;Parent=Thaps14096;rank=1 chr9 . exon 391755 391806 . + . ID=Thaps14096.1;Parent=Thaps14096;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 391974 392555 . + 0 ID=Thaps14096;Parent=Thaps14096;rank=2 chr9 . exon 391974 392555 . + . ID=Thaps14096.2;Parent=Thaps14096;constitutive=1;rank=2 chr9 . CDS 392659 393293 . + 0 ID=Thaps14096;Parent=Thaps14096;rank=3 chr9 . exon 392659 393293 . + . ID=Thaps14096.3;Parent=Thaps14096;constitutive=1;ensembl_end_phase=2;rank=3 chr9 ensembl protein_coding_gene 387697 388254 . - . ID=Thaps263515;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C813];external_name=Thaps263515;logic_name=jgi_thaps3 chr9 ensembl transcript 387697 388254 . - . ID=Thaps263515;Parent=Thaps263515;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 387697 388161 . - 0 ID=Thaps263515;Parent=Thaps263515;rank=2 chr9 . exon 387697 388161 . - . ID=Thaps263515.2;Parent=Thaps263515;constitutive=1;rank=2 chr9 . CDS 388177 388254 . - 0 ID=Thaps263515;Parent=Thaps263515;rank=1 chr9 . exon 388177 388254 . - . ID=Thaps263515.1;Parent=Thaps263515;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 393783 395190 . - . ID=Thaps36263;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C816];external_name=Thaps36263;logic_name=jgi_thaps3 chr9 ensembl transcript 393783 395190 . - . ID=Thaps36263;Parent=Thaps36263;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 393783 394417 . - 0 ID=Thaps36263;Parent=Thaps36263;rank=2 chr9 . exon 393783 394417 . - . ID=Thaps36263.2;Parent=Thaps36263;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 394521 395190 . - 0 ID=Thaps36263;Parent=Thaps36263;rank=1 chr9 . exon 394521 395190 . - . ID=Thaps36263.1;Parent=Thaps36263;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 389292 391088 . + . ID=Thaps7967;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C814];external_name=Thaps7967;logic_name=jgi_thaps3 chr9 ensembl transcript 389292 391088 . + . ID=Thaps7967;Parent=Thaps7967;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 389292 389421 . + 0 ID=Thaps7967;Parent=Thaps7967;rank=1 chr9 . exon 389292 389421 . + . ID=Thaps7967.1;Parent=Thaps7967;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 389536 390254 . + 0 ID=Thaps7967;Parent=Thaps7967;rank=2 chr9 . exon 389536 390254 . + . ID=Thaps7967.2;Parent=Thaps7967;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 390336 390680 . + 0 ID=Thaps7967;Parent=Thaps7967;rank=3 chr9 . exon 390336 390680 . + . ID=Thaps7967.3;Parent=Thaps7967;constitutive=1;rank=3 chr9 . CDS 390754 390823 . + 0 ID=Thaps7967;Parent=Thaps7967;rank=4 chr9 . exon 390754 390823 . + . ID=Thaps7967.4;Parent=Thaps7967;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 390901 391088 . + 0 ID=Thaps7967;Parent=Thaps7967;rank=5 chr9 . exon 390901 391088 . + . ID=Thaps7967.5;Parent=Thaps7967;constitutive=1;ensembl_end_phase=2;rank=5 chr9 ensembl protein_coding_gene 397656 398305 . + . ID=Thaps23957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C818];external_name=Thaps23957;logic_name=jgi_thaps3 chr9 ensembl transcript 397656 398305 . + . ID=Thaps23957;Parent=Thaps23957;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 397656 397730 . + 0 ID=Thaps23957;Parent=Thaps23957;rank=1 chr9 . exon 397656 397730 . + . ID=Thaps23957.1;Parent=Thaps23957;constitutive=1;rank=1 chr9 . CDS 397895 398143 . + 0 ID=Thaps23957;Parent=Thaps23957;rank=2 chr9 . exon 397895 398143 . + . ID=Thaps23957.2;Parent=Thaps23957;constitutive=1;rank=2 chr9 . CDS 398270 398305 . + 0 ID=Thaps23957;Parent=Thaps23957;rank=3 chr9 . exon 398270 398305 . + . ID=Thaps23957.3;Parent=Thaps23957;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 400418 402773 . - . ID=Thaps7973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C819];external_name=Thaps7973;logic_name=jgi_thaps3 chr9 ensembl transcript 400418 402773 . - . ID=Thaps7973;Parent=Thaps7973;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 400418 401395 . - 0 ID=Thaps7973;Parent=Thaps7973;rank=2 chr9 . exon 400418 401395 . - . ID=Thaps7973.2;Parent=Thaps7973;constitutive=1;rank=2 chr9 . CDS 401487 402773 . - 0 ID=Thaps7973;Parent=Thaps7973;rank=1 chr9 . exon 401487 402773 . - . ID=Thaps7973.1;Parent=Thaps7973;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 403388 404324 . + . ID=Thaps7974;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C820];external_name=Thaps7974;logic_name=jgi_thaps3 chr9 ensembl transcript 403388 404324 . + . ID=Thaps7974;Parent=Thaps7974;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 403388 403450 . + 0 ID=Thaps7974;Parent=Thaps7974;rank=1 chr9 . exon 403388 403450 . + . ID=Thaps7974.1;Parent=Thaps7974;constitutive=1;rank=1 chr9 . CDS 403623 404324 . + 0 ID=Thaps7974;Parent=Thaps7974;rank=2 chr9 . exon 403623 404324 . + . ID=Thaps7974.2;Parent=Thaps7974;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 405179 407452 . - . ID=Thaps7975;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C821];external_name=Thaps7975;logic_name=jgi_thaps3 chr9 ensembl transcript 405179 407452 . - . ID=Thaps7975;Parent=Thaps7975;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 405179 407452 . - 0 ID=Thaps7975;Parent=Thaps7975;rank=1 chr9 . exon 405179 407452 . - . ID=Thaps7975.1;Parent=Thaps7975;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 407608 408676 . + . ID=Thaps23958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C822];external_name=Thaps23958;logic_name=jgi_thaps3 chr9 ensembl transcript 407608 408676 . + . ID=Thaps23958;Parent=Thaps23958;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 407608 407824 . + 0 ID=Thaps23958;Parent=Thaps23958;rank=1 chr9 . exon 407608 407824 . + . ID=Thaps23958.1;Parent=Thaps23958;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 407901 408676 . + 0 ID=Thaps23958;Parent=Thaps23958;rank=2 chr9 . exon 407901 408676 . + . ID=Thaps23958.2;Parent=Thaps23958;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 415589 416297 . - . ID=Thaps23960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C827];external_name=Thaps23960;logic_name=jgi_thaps3 chr9 ensembl transcript 415589 416297 . - . ID=Thaps23960;Parent=Thaps23960;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 415589 416072 . - 0 ID=Thaps23960;Parent=Thaps23960;rank=2 chr9 . exon 415589 416072 . - . ID=Thaps23960.2;Parent=Thaps23960;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 416275 416297 . - 0 ID=Thaps23960;Parent=Thaps23960;rank=1 chr9 . exon 416275 416297 . - . ID=Thaps23960.1;Parent=Thaps23960;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 412687 413723 . + . ID=Thaps41694;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C825];external_name=Thaps41694;logic_name=jgi_thaps3 chr9 ensembl transcript 412687 413723 . + . ID=Thaps41694;Parent=Thaps41694;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 412687 412996 . + 0 ID=Thaps41694;Parent=Thaps41694;rank=1 chr9 . exon 412687 412996 . + . ID=Thaps41694.1;Parent=Thaps41694;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 413068 413723 . + 0 ID=Thaps41694;Parent=Thaps41694;rank=2 chr9 . exon 413068 413723 . + . ID=Thaps41694.2;Parent=Thaps41694;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 408841 410068 . - . ID=Thaps7977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C823];external_name=Thaps7977;logic_name=jgi_thaps3 chr9 ensembl transcript 408841 410068 . - . ID=Thaps7977;Parent=Thaps7977;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 408841 409472 . - 0 ID=Thaps7977;Parent=Thaps7977;rank=2 chr9 . exon 408841 409472 . - . ID=Thaps7977.2;Parent=Thaps7977;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 409573 410068 . - 0 ID=Thaps7977;Parent=Thaps7977;rank=1 chr9 . exon 409573 410068 . - . ID=Thaps7977.1;Parent=Thaps7977;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 410328 412181 . - . ID=Thaps7978;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C824];external_name=Thaps7978;logic_name=jgi_thaps3 chr9 ensembl transcript 410328 412181 . - . ID=Thaps7978;Parent=Thaps7978;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 410328 412181 . - 0 ID=Thaps7978;Parent=Thaps7978;rank=1 chr9 . exon 410328 412181 . - . ID=Thaps7978.1;Parent=Thaps7978;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 413940 415005 . - . ID=Thaps7980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C826];external_name=Thaps7980;logic_name=jgi_thaps3 chr9 ensembl transcript 413940 415005 . - . ID=Thaps7980;Parent=Thaps7980;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 413940 414282 . - 0 ID=Thaps7980;Parent=Thaps7980;rank=3 chr9 . exon 413940 414282 . - . ID=Thaps7980.3;Parent=Thaps7980;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 414368 414797 . - 0 ID=Thaps7980;Parent=Thaps7980;rank=2 chr9 . exon 414368 414797 . - . ID=Thaps7980.2;Parent=Thaps7980;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 414891 415005 . - 0 ID=Thaps7980;Parent=Thaps7980;rank=1 chr9 . exon 414891 415005 . - . ID=Thaps7980.1;Parent=Thaps7980;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 416870 419043 . - . ID=Thaps7982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C828];external_name=Thaps7982;logic_name=jgi_thaps3 chr9 ensembl transcript 416870 419043 . - . ID=Thaps7982;Parent=Thaps7982;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 416870 417025 . - 0 ID=Thaps7982;Parent=Thaps7982;rank=2 chr9 . exon 416870 417025 . - . ID=Thaps7982.2;Parent=Thaps7982;constitutive=1;rank=2 chr9 . CDS 417115 419043 . - 0 ID=Thaps7982;Parent=Thaps7982;rank=1 chr9 . repeat_region 418373 418527 . ? . description=trf chr9 . repeat_region 421477 421507 . ? . description=dust chr9 . repeat_region 421675 421695 . ? . description=trf chr9 ensembl protein_coding_gene 419631 420509 . + . ID=Thaps18407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C829];external_name=Thaps18407;logic_name=jgi_thaps3 chr9 ensembl transcript 419631 420509 . + . ID=Thaps18407;Parent=Thaps18407;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 419631 419852 . + 0 ID=Thaps18407;Parent=Thaps18407;rank=1 chr9 . exon 419631 419852 . + . ID=Thaps18407.1;Parent=Thaps18407;constitutive=1;rank=1 chr9 . CDS 419937 420050 . + 0 ID=Thaps18407;Parent=Thaps18407;rank=2 chr9 . exon 419937 420050 . + . ID=Thaps18407.2;Parent=Thaps18407;constitutive=1;rank=2 chr9 . CDS 420294 420509 . + 0 ID=Thaps18407;Parent=Thaps18407;rank=3 chr9 . exon 420294 420509 . + . ID=Thaps18407.3;Parent=Thaps18407;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 421737 427828 . + . ID=Thaps23962;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C831];external_name=Thaps23962;logic_name=jgi_thaps3 chr9 ensembl transcript 421737 427828 . + . ID=Thaps23962;Parent=Thaps23962;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 421737 422818 . + 0 ID=Thaps23962;Parent=Thaps23962;rank=1 chr9 . exon 421737 422818 . + . ID=Thaps23962.1;Parent=Thaps23962;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 423071 423946 . + 0 ID=Thaps23962;Parent=Thaps23962;rank=2 chr9 . exon 423071 423946 . + . ID=Thaps23962.2;Parent=Thaps23962;constitutive=1;rank=2 chr9 . CDS 424000 427828 . + 0 ID=Thaps23962;Parent=Thaps23962;rank=3 chr9 . exon 424000 427828 . + . ID=Thaps23962.3;Parent=Thaps23962;constitutive=1;ensembl_end_phase=1;rank=3 chr9 ensembl protein_coding_gene 420945 421477 . - . ID=Thaps41697;biotype=protein_coding;description=Thioredoxin [Source:UniProtKB/TrEMBL%3BAcc:B8C830];external_name=Thaps41697;logic_name=jgi_thaps3 chr9 ensembl transcript 420945 421477 . - . ID=Thaps41697;Parent=Thaps41697;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 420945 421170 . - 0 ID=Thaps41697;Parent=Thaps41697;rank=2 chr9 . exon 420945 421170 . - . ID=Thaps41697.2;Parent=Thaps41697;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 421386 421477 . - 0 ID=Thaps41697;Parent=Thaps41697;rank=1 chr9 . exon 421386 421477 . - . ID=Thaps41697.1;Parent=Thaps41697;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . exon 417115 419043 . - . ID=Thaps7982.1;Parent=Thaps7982;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 431790 432836 . + . ID=Thaps269421;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C834];external_name=Thaps269421;logic_name=jgi_thaps3 chr9 ensembl transcript 431790 432836 . + . ID=Thaps269421;Parent=Thaps269421;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 431790 432836 . + 0 ID=Thaps269421;Parent=Thaps269421;rank=1 chr9 . exon 431790 432836 . + . ID=Thaps269421.1;Parent=Thaps269421;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 434295 438100 . + . ID=Thaps269422;biotype=protein_coding;description=Wd-40 repeat-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C836];external_name=Thaps269422;logic_name=jgi_thaps3 chr9 ensembl transcript 434295 438100 . + . ID=Thaps269422;Parent=Thaps269422;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 434295 434471 . + 0 ID=Thaps269422;Parent=Thaps269422;rank=1 chr9 . exon 434295 434471 . + . ID=Thaps269422.1;Parent=Thaps269422;constitutive=1;rank=1 chr9 . CDS 435191 435316 . + 0 ID=Thaps269422;Parent=Thaps269422;rank=2 chr9 . exon 435191 435316 . + . ID=Thaps269422.2;Parent=Thaps269422;constitutive=1;rank=2 chr9 . CDS 435569 435740 . + 0 ID=Thaps269422;Parent=Thaps269422;rank=3 chr9 . exon 435569 435740 . + . ID=Thaps269422.3;Parent=Thaps269422;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 436002 436234 . + 0 ID=Thaps269422;Parent=Thaps269422;rank=4 chr9 . exon 436002 436234 . + . ID=Thaps269422.4;Parent=Thaps269422;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 436346 436500 . + 0 ID=Thaps269422;Parent=Thaps269422;rank=5 chr9 . exon 436346 436500 . + . ID=Thaps269422.5;Parent=Thaps269422;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 436581 437117 . + 0 ID=Thaps269422;Parent=Thaps269422;rank=6 chr9 . exon 436581 437117 . + . ID=Thaps269422.6;Parent=Thaps269422;constitutive=1;rank=6 chr9 . CDS 437206 437344 . + 0 ID=Thaps269422;Parent=Thaps269422;rank=7 chr9 . CDS 437417 437887 . + 0 ID=Thaps269422;Parent=Thaps269422;rank=8 chr9 . CDS 437969 438100 . + 0 ID=Thaps269422;Parent=Thaps269422;rank=9 chr9 ensembl protein_coding_gene 428493 430598 . + . ID=Thaps29304;biotype=protein_coding;description=Tubulin alpha [Source:UniProtKB/TrEMBL%3BAcc:B8C832];external_name=TUB1;logic_name=jgi_thaps3 chr9 ensembl transcript 428493 430598 . + . ID=Thaps29304;Parent=Thaps29304;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 428493 428499 . + 0 ID=Thaps29304;Parent=Thaps29304;rank=1 chr9 . exon 428493 428499 . + . ID=Thaps29304.1;Parent=Thaps29304;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 429006 429334 . + 0 ID=Thaps29304;Parent=Thaps29304;rank=2 chr9 . exon 429006 429334 . + . ID=Thaps29304.2;Parent=Thaps29304;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 429409 430128 . + 0 ID=Thaps29304;Parent=Thaps29304;rank=3 chr9 . exon 429409 430128 . + . ID=Thaps29304.3;Parent=Thaps29304;constitutive=1;rank=3 chr9 . CDS 430206 430394 . + 0 ID=Thaps29304;Parent=Thaps29304;rank=4 chr9 . exon 430206 430394 . + . ID=Thaps29304.4;Parent=Thaps29304;constitutive=1;rank=4 chr9 . CDS 430485 430598 . + 0 ID=Thaps29304;Parent=Thaps29304;rank=5 chr9 . exon 430485 430598 . + . ID=Thaps29304.5;Parent=Thaps29304;constitutive=1;rank=5 chr9 ensembl protein_coding_gene 430823 431161 . - . ID=Thaps7987;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C833];external_name=Thaps7987;logic_name=jgi_thaps3 chr9 ensembl transcript 430823 431161 . - . ID=Thaps7987;Parent=Thaps7987;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 430823 431161 . - 0 ID=Thaps7987;Parent=Thaps7987;rank=1 chr9 . exon 430823 431161 . - . ID=Thaps7987.1;Parent=Thaps7987;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 433048 433584 . - . ID=Thaps7989;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C835];external_name=Thaps7989;logic_name=jgi_thaps3 chr9 ensembl transcript 433048 433584 . - . ID=Thaps7989;Parent=Thaps7989;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 433048 433584 . - 0 ID=Thaps7989;Parent=Thaps7989;rank=1 chr9 . exon 433048 433584 . - . ID=Thaps7989.1;Parent=Thaps7989;constitutive=1;rank=1 chr9 . repeat_region 441357 441364 . ? . description=dust chr9 . repeat_region 443571 443617 . ? . description=dust chr9 . repeat_region 443984 444002 . ? . description=dust chr9 . repeat_region 443984 444007 . ? . description=trf chr9 . repeat_region 444963 444978 . ? . description=dust chr9 . biological_region 445421 445423 0.999 + . logic_name=eponine chr9 ensembl protein_coding_gene 439890 444913 . - . ID=Thaps23966;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C837];external_name=Thaps23966;logic_name=jgi_thaps3 chr9 ensembl transcript 439890 444913 . - . ID=Thaps23966;Parent=Thaps23966;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 439890 441993 . - 0 ID=Thaps23966;Parent=Thaps23966;rank=2 chr9 . exon 439890 441993 . - . ID=Thaps23966.2;Parent=Thaps23966;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 442083 444913 . - 0 ID=Thaps23966;Parent=Thaps23966;rank=1 chr9 . exon 442083 444913 . - . ID=Thaps23966.1;Parent=Thaps23966;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 445623 449226 . + . ID=Thaps23967;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C838];external_name=Thaps23967;logic_name=jgi_thaps3 chr9 ensembl transcript 445623 449226 . + . ID=Thaps23967;Parent=Thaps23967;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 445623 448994 . + 0 ID=Thaps23967;Parent=Thaps23967;rank=1 chr9 . exon 445623 448994 . + . ID=Thaps23967.1;Parent=Thaps23967;constitutive=1;rank=1 chr9 . CDS 449077 449226 . + 0 ID=Thaps23967;Parent=Thaps23967;rank=2 chr9 . exon 437206 437344 . + . ID=Thaps269422.7;Parent=Thaps269422;constitutive=1;ensembl_end_phase=1;rank=7 chr9 . exon 437417 437887 . + . ID=Thaps269422.8;Parent=Thaps269422;constitutive=1;rank=8 chr9 . exon 437969 438100 . + . ID=Thaps269422.9;Parent=Thaps269422;constitutive=1;rank=9 chr9 . exon 449077 449226 . + . ID=Thaps23967.2;Parent=Thaps23967;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 451724 452256 . + . ID=Thaps263528;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C840];external_name=Thaps263528;logic_name=jgi_thaps3 chr9 ensembl transcript 451724 452256 . + . ID=Thaps263528;Parent=Thaps263528;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 451724 452256 . + 0 ID=Thaps263528;Parent=Thaps263528;rank=1 chr9 . exon 451724 452256 . + . ID=Thaps263528.1;Parent=Thaps263528;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 452580 454262 . - . ID=Thaps269423;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C841];external_name=Thaps269423;logic_name=jgi_thaps3 chr9 ensembl transcript 452580 454262 . - . ID=Thaps269423;Parent=Thaps269423;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 452580 452783 . - 0 ID=Thaps269423;Parent=Thaps269423;rank=3 chr9 . exon 452580 452783 . - . ID=Thaps269423.3;Parent=Thaps269423;constitutive=1;rank=3 chr9 . CDS 452865 453035 . - 0 ID=Thaps269423;Parent=Thaps269423;rank=2 chr9 . exon 452865 453035 . - . ID=Thaps269423.2;Parent=Thaps269423;constitutive=1;rank=2 chr9 . CDS 453084 454262 . - 0 ID=Thaps269423;Parent=Thaps269423;rank=1 chr9 . exon 453084 454262 . - . ID=Thaps269423.1;Parent=Thaps269423;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 449388 449924 . - . ID=Thaps36243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C839];external_name=Thaps36243;logic_name=jgi_thaps3 chr9 ensembl transcript 449388 449924 . - . ID=Thaps36243;Parent=Thaps36243;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 449388 449924 . - 0 ID=Thaps36243;Parent=Thaps36243;rank=1 chr9 . exon 449388 449924 . - . ID=Thaps36243.1;Parent=Thaps36243;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 454644 457916 . + . ID=Thaps7996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C842];external_name=Thaps7996;logic_name=jgi_thaps3 chr9 ensembl transcript 454644 457916 . + . ID=Thaps7996;Parent=Thaps7996;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 454644 457916 . + 0 ID=Thaps7996;Parent=Thaps7996;rank=1 chr9 . exon 454644 457916 . + . ID=Thaps7996.1;Parent=Thaps7996;constitutive=1;rank=1 chr9 . repeat_region 464210 464218 . ? . description=dust chr9 . repeat_region 465113 465120 . ? . description=dust chr9 . repeat_region 465536 465693 . + . description=Gypsy1ALTR_TP chr9 ensembl protein_coding_gene 460526 463692 . + . ID=Thaps23969;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C844];external_name=Thaps23969;logic_name=jgi_thaps3 chr9 ensembl transcript 460526 463692 . + . ID=Thaps23969;Parent=Thaps23969;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 460526 460732 . + 0 ID=Thaps23969;Parent=Thaps23969;rank=1 chr9 . exon 460526 460732 . + . ID=Thaps23969.1;Parent=Thaps23969;constitutive=1;rank=1 chr9 . CDS 460795 463692 . + 0 ID=Thaps23969;Parent=Thaps23969;rank=2 chr9 . exon 460795 463692 . + . ID=Thaps23969.2;Parent=Thaps23969;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 459186 460022 . - . ID=Thaps7997;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C843];external_name=Thaps7997;logic_name=jgi_thaps3 chr9 ensembl transcript 459186 460022 . - . ID=Thaps7997;Parent=Thaps7997;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 459186 460022 . - 0 ID=Thaps7997;Parent=Thaps7997;rank=1 chr9 . exon 459186 460022 . - . ID=Thaps7997.1;Parent=Thaps7997;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 464396 464881 . - . ID=Thaps7999;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C845];external_name=Thaps7999;logic_name=jgi_thaps3 chr9 ensembl transcript 464396 464881 . - . ID=Thaps7999;Parent=Thaps7999;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 464396 464881 . - 0 ID=Thaps7999;Parent=Thaps7999;rank=1 chr9 . exon 464396 464881 . - . ID=Thaps7999.1;Parent=Thaps7999;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 467666 478446 . - . ID=Thaps23971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C846];external_name=Thaps23971;logic_name=jgi_thaps3 chr9 ensembl transcript 467666 478446 . - . ID=Thaps23971;Parent=Thaps23971;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 467666 468159 . - 0 ID=Thaps23971;Parent=Thaps23971;rank=5 chr9 . exon 467666 468159 . - . ID=Thaps23971.5;Parent=Thaps23971;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 468250 471148 . - 0 ID=Thaps23971;Parent=Thaps23971;rank=4 chr9 . exon 468250 471148 . - . ID=Thaps23971.4;Parent=Thaps23971;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 471234 475510 . - 0 ID=Thaps23971;Parent=Thaps23971;rank=3 chr9 . exon 471234 475510 . - . ID=Thaps23971.3;Parent=Thaps23971;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 475595 477008 . - 0 ID=Thaps23971;Parent=Thaps23971;rank=2 chr9 . exon 475595 477008 . - . ID=Thaps23971.2;Parent=Thaps23971;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 477049 478446 . - 0 ID=Thaps23971;Parent=Thaps23971;rank=1 chr9 . repeat_region 478541 478560 . ? . description=dust chr9 . repeat_region 479349 479362 . ? . description=dust chr9 . exon 477049 478446 . - . ID=Thaps23971.1;Parent=Thaps23971;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 479220 480567 . + . ID=Thaps36297;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C847];external_name=Thaps36297;logic_name=jgi_thaps3 chr9 ensembl transcript 479220 480567 . + . ID=Thaps36297;Parent=Thaps36297;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 479220 479327 . + 0 ID=Thaps36297;Parent=Thaps36297;rank=1 chr9 . exon 479220 479327 . + . ID=Thaps36297.1;Parent=Thaps36297;constitutive=1;rank=1 chr9 . CDS 479474 479521 . + 0 ID=Thaps36297;Parent=Thaps36297;rank=2 chr9 . exon 479474 479521 . + . ID=Thaps36297.2;Parent=Thaps36297;constitutive=1;rank=2 chr9 . CDS 479620 480019 . + 0 ID=Thaps36297;Parent=Thaps36297;rank=3 chr9 . exon 479620 480019 . + . ID=Thaps36297.3;Parent=Thaps36297;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 480113 480567 . + 0 ID=Thaps36297;Parent=Thaps36297;rank=4 chr9 . exon 480113 480567 . + . ID=Thaps36297.4;Parent=Thaps36297;constitutive=1;ensembl_end_phase=2;rank=4 chr9 ensembl protein_coding_gene 480677 481642 . - . ID=Thaps8002;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C848];external_name=Thaps8002;logic_name=jgi_thaps3 chr9 ensembl transcript 480677 481642 . - . ID=Thaps8002;Parent=Thaps8002;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 480677 481642 . - 0 ID=Thaps8002;Parent=Thaps8002;rank=1 chr9 . exon 480677 481642 . - . ID=Thaps8002.1;Parent=Thaps8002;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 481931 482386 . - . ID=Thaps8003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C849];external_name=Thaps8003;logic_name=jgi_thaps3 chr9 ensembl transcript 481931 482386 . - . ID=Thaps8003;Parent=Thaps8003;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 481931 482386 . - 0 ID=Thaps8003;Parent=Thaps8003;rank=1 chr9 . exon 481931 482386 . - . ID=Thaps8003.1;Parent=Thaps8003;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 483113 486030 . + . ID=Thaps8004;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C850];external_name=Thaps8004;logic_name=jgi_thaps3 chr9 ensembl transcript 483113 486030 . + . ID=Thaps8004;Parent=Thaps8004;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 483113 483464 . + 0 ID=Thaps8004;Parent=Thaps8004;rank=1 chr9 . exon 483113 483464 . + . ID=Thaps8004.1;Parent=Thaps8004;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 483557 483740 . + 0 ID=Thaps8004;Parent=Thaps8004;rank=2 chr9 . exon 483557 483740 . + . ID=Thaps8004.2;Parent=Thaps8004;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 483809 483935 . + 0 ID=Thaps8004;Parent=Thaps8004;rank=3 chr9 . exon 483809 483935 . + . ID=Thaps8004.3;Parent=Thaps8004;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 483967 484035 . + 0 ID=Thaps8004;Parent=Thaps8004;rank=4 chr9 . exon 483967 484035 . + . ID=Thaps8004.4;Parent=Thaps8004;constitutive=1;rank=4 chr9 . CDS 484121 484341 . + 0 ID=Thaps8004;Parent=Thaps8004;rank=5 chr9 . exon 484121 484341 . + . ID=Thaps8004.5;Parent=Thaps8004;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 484437 485252 . + 0 ID=Thaps8004;Parent=Thaps8004;rank=6 chr9 . exon 484437 485252 . + . ID=Thaps8004.6;Parent=Thaps8004;constitutive=1;rank=6 chr9 . CDS 485342 485622 . + 0 ID=Thaps8004;Parent=Thaps8004;rank=7 chr9 . exon 485342 485622 . + . ID=Thaps8004.7;Parent=Thaps8004;constitutive=1;ensembl_end_phase=2;rank=7 chr9 . CDS 485708 486030 . + 0 ID=Thaps8004;Parent=Thaps8004;rank=8 chr9 . exon 485708 486030 . + . ID=Thaps8004.8;Parent=Thaps8004;constitutive=1;ensembl_end_phase=2;rank=8 chr9 ensembl protein_coding_gene 487726 489969 . + . ID=Thaps23973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C851];external_name=Thaps23973;logic_name=jgi_thaps3 chr9 ensembl transcript 487726 489969 . + . ID=Thaps23973;Parent=Thaps23973;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 487726 489061 . + 0 ID=Thaps23973;Parent=Thaps23973;rank=1 chr9 . exon 487726 489061 . + . ID=Thaps23973.1;Parent=Thaps23973;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 489142 489437 . + 0 ID=Thaps23973;Parent=Thaps23973;rank=2 chr9 . exon 489142 489437 . + . ID=Thaps23973.2;Parent=Thaps23973;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 489525 489553 . + 0 ID=Thaps23973;Parent=Thaps23973;rank=3 chr9 . exon 489525 489553 . + . ID=Thaps23973.3;Parent=Thaps23973;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 489642 489969 . + 0 ID=Thaps23973;Parent=Thaps23973;rank=4 chr9 . exon 489642 489969 . + . ID=Thaps23973.4;Parent=Thaps23973;constitutive=1;ensembl_end_phase=1;rank=4 chr9 ensembl protein_coding_gene 493552 496477 . - . ID=Thaps23975;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C853];external_name=Thaps23975;logic_name=jgi_thaps3 chr9 ensembl transcript 493552 496477 . - . ID=Thaps23975;Parent=Thaps23975;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 493552 495602 . - 0 ID=Thaps23975;Parent=Thaps23975;rank=3 chr9 . exon 493552 495602 . - . ID=Thaps23975.3;Parent=Thaps23975;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 495742 495783 . - 0 ID=Thaps23975;Parent=Thaps23975;rank=2 chr9 . exon 495742 495783 . - . ID=Thaps23975.2;Parent=Thaps23975;constitutive=1;rank=2 chr9 . CDS 495871 496477 . - 0 ID=Thaps23975;Parent=Thaps23975;rank=1 chr9 . exon 495871 496477 . - . ID=Thaps23975.1;Parent=Thaps23975;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 490018 491607 . - . ID=Thaps8006;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C852];external_name=Thaps8006;logic_name=jgi_thaps3 chr9 ensembl transcript 490018 491607 . - . ID=Thaps8006;Parent=Thaps8006;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 490018 491607 . - 0 ID=Thaps8006;Parent=Thaps8006;rank=1 chr9 . exon 490018 491607 . - . ID=Thaps8006.1;Parent=Thaps8006;constitutive=1;rank=1 chr9 . repeat_region 502453 502482 . ? . description=trf chr9 ensembl protein_coding_gene 505033 506433 . + . ID=Thaps23976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C855];external_name=Thaps23976;logic_name=jgi_thaps3 chr9 ensembl transcript 505033 506433 . + . ID=Thaps23976;Parent=Thaps23976;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 505033 505306 . + 0 ID=Thaps23976;Parent=Thaps23976;rank=1 chr9 . exon 505033 505306 . + . ID=Thaps23976.1;Parent=Thaps23976;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 505427 505659 . + 0 ID=Thaps23976;Parent=Thaps23976;rank=2 chr9 . exon 505427 505659 . + . ID=Thaps23976.2;Parent=Thaps23976;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 505738 506433 . + 0 ID=Thaps23976;Parent=Thaps23976;rank=3 chr9 . exon 505738 506433 . + . ID=Thaps23976.3;Parent=Thaps23976;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 497000 497507 . + . ID=Thaps8009;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C854];external_name=Thaps8009;logic_name=jgi_thaps3 chr9 ensembl transcript 497000 497507 . + . ID=Thaps8009;Parent=Thaps8009;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 497000 497302 . + 0 ID=Thaps8009;Parent=Thaps8009;rank=1 chr9 . exon 497000 497302 . + . ID=Thaps8009.1;Parent=Thaps8009;constitutive=1;rank=1 chr9 . CDS 497340 497507 . + 0 ID=Thaps8009;Parent=Thaps8009;rank=2 chr9 . exon 497340 497507 . + . ID=Thaps8009.2;Parent=Thaps8009;constitutive=1;rank=2 chr9 . repeat_region 506757 506766 . ? . description=dust chr9 . repeat_region 514085 514120 . ? . description=dust chr9 ensembl protein_coding_gene 507419 508623 . + . ID=Thaps14389;biotype=protein_coding;description=Histidine decarboxylase [Source:UniProtKB/TrEMBL%3BAcc:B8C857];external_name=HDC;logic_name=jgi_thaps3 chr9 ensembl transcript 507419 508623 . + . ID=Thaps14389;Parent=Thaps14389;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 507419 508287 . + 0 ID=Thaps14389;Parent=Thaps14389;rank=1 chr9 . exon 507419 508287 . + . ID=Thaps14389.1;Parent=Thaps14389;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 508386 508623 . + 0 ID=Thaps14389;Parent=Thaps14389;rank=2 chr9 . exon 508386 508623 . + . ID=Thaps14389.2;Parent=Thaps14389;constitutive=1;ensembl_end_phase=1;rank=2 chr9 ensembl protein_coding_gene 513687 519647 . + . ID=Thaps23979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C860];external_name=Thaps23979;logic_name=jgi_thaps3 chr9 ensembl transcript 513687 519647 . + . ID=Thaps23979;Parent=Thaps23979;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 513687 514881 . + 0 ID=Thaps23979;Parent=Thaps23979;rank=1 chr9 . exon 513687 514881 . + . ID=Thaps23979.1;Parent=Thaps23979;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 514901 516156 . + 0 ID=Thaps23979;Parent=Thaps23979;rank=2 chr9 . exon 514901 516156 . + . ID=Thaps23979.2;Parent=Thaps23979;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 516240 518584 . + 0 ID=Thaps23979;Parent=Thaps23979;rank=3 chr9 . CDS 518669 519647 . + 0 ID=Thaps23979;Parent=Thaps23979;rank=4 chr9 ensembl protein_coding_gene 506732 507370 . + . ID=Thaps8011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C856];external_name=Thaps8011;logic_name=jgi_thaps3 chr9 ensembl transcript 506732 507370 . + . ID=Thaps8011;Parent=Thaps8011;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 506732 507370 . + 0 ID=Thaps8011;Parent=Thaps8011;rank=1 chr9 . exon 506732 507370 . + . ID=Thaps8011.1;Parent=Thaps8011;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 509826 510991 . + . ID=Thaps8014;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C858];external_name=Thaps8014;logic_name=jgi_thaps3 chr9 ensembl transcript 509826 510991 . + . ID=Thaps8014;Parent=Thaps8014;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 509826 510169 . + 0 ID=Thaps8014;Parent=Thaps8014;rank=1 chr9 . exon 509826 510169 . + . ID=Thaps8014.1;Parent=Thaps8014;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 510331 510570 . + 0 ID=Thaps8014;Parent=Thaps8014;rank=2 chr9 . exon 510331 510570 . + . ID=Thaps8014.2;Parent=Thaps8014;constitutive=1;rank=2 chr9 . CDS 510664 510991 . + 0 ID=Thaps8014;Parent=Thaps8014;rank=3 chr9 . exon 510664 510991 . + . ID=Thaps8014.3;Parent=Thaps8014;constitutive=1;ensembl_end_phase=1;rank=3 chr9 ensembl protein_coding_gene 511258 512257 . - . ID=Thaps8015;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C859];external_name=Thaps8015;logic_name=jgi_thaps3 chr9 ensembl transcript 511258 512257 . - . ID=Thaps8015;Parent=Thaps8015;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 511258 511569 . - 0 ID=Thaps8015;Parent=Thaps8015;rank=3 chr9 . exon 511258 511569 . - . ID=Thaps8015.3;Parent=Thaps8015;constitutive=1;rank=3 chr9 . CDS 511673 511888 . - 0 ID=Thaps8015;Parent=Thaps8015;rank=2 chr9 . exon 511673 511888 . - . ID=Thaps8015.2;Parent=Thaps8015;constitutive=1;rank=2 chr9 . CDS 512003 512257 . - 0 ID=Thaps8015;Parent=Thaps8015;rank=1 chr9 . exon 512003 512257 . - . ID=Thaps8015.1;Parent=Thaps8015;constitutive=1;rank=1 chr9 . repeat_region 518353 518385 . ? . description=trf chr9 . repeat_region 524792 524811 . ? . description=trf chr9 . exon 516240 518584 . + . ID=Thaps23979.3;Parent=Thaps23979;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . exon 518669 519647 . + . ID=Thaps23979.4;Parent=Thaps23979;constitutive=1;ensembl_end_phase=1;rank=4 chr9 ensembl protein_coding_gene 522163 523976 . + . ID=Thaps263534;biotype=protein_coding;description=Dolichyl pyrophosphate Glc1Man9GlcNAc2%3B Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C862];external_name=Thaps263534;logic_name=jgi_thaps3 chr9 ensembl transcript 522163 523976 . + . ID=Thaps263534;Parent=Thaps263534;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 522163 522556 . + 0 ID=Thaps263534;Parent=Thaps263534;rank=1 chr9 . exon 522163 522556 . + . ID=Thaps263534.1;Parent=Thaps263534;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 522584 522996 . + 0 ID=Thaps263534;Parent=Thaps263534;rank=2 chr9 . exon 522584 522996 . + . ID=Thaps263534.2;Parent=Thaps263534;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 523027 523074 . + 0 ID=Thaps263534;Parent=Thaps263534;rank=3 chr9 . exon 523027 523074 . + . ID=Thaps263534.3;Parent=Thaps263534;constitutive=1;rank=3 chr9 . CDS 523160 523447 . + 0 ID=Thaps263534;Parent=Thaps263534;rank=4 chr9 . exon 523160 523447 . + . ID=Thaps263534.4;Parent=Thaps263534;constitutive=1;rank=4 chr9 . CDS 523539 523976 . + 0 ID=Thaps263534;Parent=Thaps263534;rank=5 chr9 . exon 523539 523976 . + . ID=Thaps263534.5;Parent=Thaps263534;constitutive=1;rank=5 chr9 ensembl protein_coding_gene 519822 520711 . - . ID=Thaps29314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C861];external_name=Thaps29314;logic_name=jgi_thaps3 chr9 ensembl transcript 519822 520711 . - . ID=Thaps29314;Parent=Thaps29314;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 519822 519910 . - 0 ID=Thaps29314;Parent=Thaps29314;rank=2 chr9 . exon 519822 519910 . - . ID=Thaps29314.2;Parent=Thaps29314;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 520000 520711 . - 0 ID=Thaps29314;Parent=Thaps29314;rank=1 chr9 . exon 520000 520711 . - . ID=Thaps29314.1;Parent=Thaps29314;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 525089 528673 . + . ID=Thaps8019;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C863];external_name=Thaps8019;logic_name=jgi_thaps3 chr9 ensembl transcript 525089 528673 . + . ID=Thaps8019;Parent=Thaps8019;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 525089 525653 . + 0 ID=Thaps8019;Parent=Thaps8019;rank=1 chr9 . exon 525089 525653 . + . ID=Thaps8019.1;Parent=Thaps8019;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 525770 525917 . + 0 ID=Thaps8019;Parent=Thaps8019;rank=2 chr9 . exon 525770 525917 . + . ID=Thaps8019.2;Parent=Thaps8019;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 526010 526886 . + 0 ID=Thaps8019;Parent=Thaps8019;rank=3 chr9 . exon 526010 526886 . + . ID=Thaps8019.3;Parent=Thaps8019;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 526979 527161 . + 0 ID=Thaps8019;Parent=Thaps8019;rank=4 chr9 . CDS 527241 527298 . + 0 ID=Thaps8019;Parent=Thaps8019;rank=5 chr9 . CDS 527370 527439 . + 0 ID=Thaps8019;Parent=Thaps8019;rank=6 chr9 . CDS 527517 528047 . + 0 ID=Thaps8019;Parent=Thaps8019;rank=7 chr9 . CDS 528133 528673 . + 0 ID=Thaps8019;Parent=Thaps8019;rank=8 chr9 ensembl protein_coding_gene 530976 531890 . - . ID=Thaps23981;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C865];external_name=Thaps23981;logic_name=jgi_thaps3 chr9 ensembl transcript 530976 531890 . - . ID=Thaps23981;Parent=Thaps23981;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 530976 531890 . - 0 ID=Thaps23981;Parent=Thaps23981;rank=1 chr9 . exon 530976 531890 . - . ID=Thaps23981.1;Parent=Thaps23981;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 535021 536535 . - . ID=Thaps23982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C867];external_name=Thaps23982;logic_name=jgi_thaps3 chr9 ensembl transcript 535021 536535 . - . ID=Thaps23982;Parent=Thaps23982;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 535021 536535 . - 0 ID=Thaps23982;Parent=Thaps23982;rank=1 chr9 . exon 535021 536535 . - . ID=Thaps23982.1;Parent=Thaps23982;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 529394 530757 . + . ID=Thaps263535;biotype=protein_coding;description=Calmodulin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C864];external_name=Thaps263535;logic_name=jgi_thaps3 chr9 ensembl transcript 529394 530757 . + . ID=Thaps263535;Parent=Thaps263535;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 529394 529569 . + 0 ID=Thaps263535;Parent=Thaps263535;rank=1 chr9 . exon 529394 529569 . + . ID=Thaps263535.1;Parent=Thaps263535;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 530176 530230 . + 0 ID=Thaps263535;Parent=Thaps263535;rank=2 chr9 . exon 530176 530230 . + . ID=Thaps263535.2;Parent=Thaps263535;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 530669 530757 . + 0 ID=Thaps263535;Parent=Thaps263535;rank=3 chr9 . exon 530669 530757 . + . ID=Thaps263535.3;Parent=Thaps263535;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . exon 526979 527161 . + . ID=Thaps8019.4;Parent=Thaps8019;constitutive=1;rank=4 chr9 . exon 527241 527298 . + . ID=Thaps8019.5;Parent=Thaps8019;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . exon 527370 527439 . + . ID=Thaps8019.6;Parent=Thaps8019;constitutive=1;ensembl_end_phase=1;rank=6 chr9 . exon 527517 528047 . + . ID=Thaps8019.7;Parent=Thaps8019;constitutive=1;rank=7 chr9 . exon 528133 528673 . + . ID=Thaps8019.8;Parent=Thaps8019;constitutive=1;ensembl_end_phase=1;rank=8 chr9 ensembl protein_coding_gene 532384 534537 . + . ID=Thaps8022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C866];external_name=Thaps8022;logic_name=jgi_thaps3 chr9 ensembl transcript 532384 534537 . + . ID=Thaps8022;Parent=Thaps8022;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 532384 534537 . + 0 ID=Thaps8022;Parent=Thaps8022;rank=1 chr9 . exon 532384 534537 . + . ID=Thaps8022.1;Parent=Thaps8022;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 536886 538211 . + . ID=Thaps23983;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C868];external_name=Thaps23983;logic_name=jgi_thaps3 chr9 ensembl transcript 536886 538211 . + . ID=Thaps23983;Parent=Thaps23983;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 536886 538211 . + 0 ID=Thaps23983;Parent=Thaps23983;rank=1 chr9 . exon 536886 538211 . + . ID=Thaps23983.1;Parent=Thaps23983;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 540276 543454 . + . ID=Thaps23984;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C870];external_name=Thaps23984;logic_name=jgi_thaps3 chr9 ensembl transcript 540276 543454 . + . ID=Thaps23984;Parent=Thaps23984;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 540276 540788 . + 0 ID=Thaps23984;Parent=Thaps23984;rank=1 chr9 . exon 540276 540788 . + . ID=Thaps23984.1;Parent=Thaps23984;constitutive=1;rank=1 chr9 . CDS 540872 541184 . + 0 ID=Thaps23984;Parent=Thaps23984;rank=2 chr9 . exon 540872 541184 . + . ID=Thaps23984.2;Parent=Thaps23984;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 541264 541442 . + 0 ID=Thaps23984;Parent=Thaps23984;rank=3 chr9 . exon 541264 541442 . + . ID=Thaps23984.3;Parent=Thaps23984;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 541573 541638 . + 0 ID=Thaps23984;Parent=Thaps23984;rank=4 chr9 . exon 541573 541638 . + . ID=Thaps23984.4;Parent=Thaps23984;constitutive=1;rank=4 chr9 . CDS 541749 542634 . + 0 ID=Thaps23984;Parent=Thaps23984;rank=5 chr9 . exon 541749 542634 . + . ID=Thaps23984.5;Parent=Thaps23984;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 542703 542866 . + 0 ID=Thaps23984;Parent=Thaps23984;rank=6 chr9 . exon 542703 542866 . + . ID=Thaps23984.6;Parent=Thaps23984;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 542971 543007 . + 0 ID=Thaps23984;Parent=Thaps23984;rank=7 chr9 . exon 542971 543007 . + . ID=Thaps23984.7;Parent=Thaps23984;constitutive=1;ensembl_end_phase=1;rank=7 chr9 . CDS 543084 543454 . + 0 ID=Thaps23984;Parent=Thaps23984;rank=8 chr9 . exon 543084 543454 . + . ID=Thaps23984.8;Parent=Thaps23984;constitutive=1;ensembl_end_phase=2;rank=8 chr9 ensembl protein_coding_gene 539130 539864 . + . ID=Thaps263536;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C869];external_name=Thaps263536;logic_name=jgi_thaps3 chr9 ensembl transcript 539130 539864 . + . ID=Thaps263536;Parent=Thaps263536;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 539130 539198 . + 0 ID=Thaps263536;Parent=Thaps263536;rank=1 chr9 . exon 539130 539198 . + . ID=Thaps263536.1;Parent=Thaps263536;constitutive=1;rank=1 chr9 . CDS 539223 539567 . + 0 ID=Thaps263536;Parent=Thaps263536;rank=2 chr9 . exon 539223 539567 . + . ID=Thaps263536.2;Parent=Thaps263536;constitutive=1;rank=2 chr9 . CDS 539661 539864 . + 0 ID=Thaps263536;Parent=Thaps263536;rank=3 chr9 . exon 539661 539864 . + . ID=Thaps263536.3;Parent=Thaps263536;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 543576 544589 . - . ID=Thaps644;biotype=protein_coding;description=Adenosine kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C871];external_name=AK2;logic_name=jgi_thaps3 chr9 ensembl transcript 543576 544589 . - . ID=Thaps644;Parent=Thaps644;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 543576 544589 . - 0 ID=Thaps644;Parent=Thaps644;rank=1 chr9 . exon 543576 544589 . - . ID=Thaps644.1;Parent=Thaps644;constitutive=1;rank=1 chr9 . repeat_region 552798 552961 . + . description=Gypsy1ALTR_TP chr9 ensembl protein_coding_gene 547562 548313 . - . ID=Thaps23986;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C873];external_name=Thaps23986;logic_name=jgi_thaps3 chr9 ensembl transcript 547562 548313 . - . ID=Thaps23986;Parent=Thaps23986;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 547562 547707 . - 0 ID=Thaps23986;Parent=Thaps23986;rank=3 chr9 . exon 547562 547707 . - . ID=Thaps23986.3;Parent=Thaps23986;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 547849 548109 . - 0 ID=Thaps23986;Parent=Thaps23986;rank=2 chr9 . exon 547849 548109 . - . ID=Thaps23986.2;Parent=Thaps23986;constitutive=1;rank=2 chr9 . CDS 548157 548313 . - 0 ID=Thaps23986;Parent=Thaps23986;rank=1 chr9 . exon 548157 548313 . - . ID=Thaps23986.1;Parent=Thaps23986;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 548777 552217 . + . ID=Thaps23987;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C874];external_name=Thaps23987;logic_name=jgi_thaps3 chr9 ensembl transcript 548777 552217 . + . ID=Thaps23987;Parent=Thaps23987;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 548777 552217 . + 0 ID=Thaps23987;Parent=Thaps23987;rank=1 chr9 . exon 548777 552217 . + . ID=Thaps23987.1;Parent=Thaps23987;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 554300 565632 . - . ID=Thaps23988;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C876];external_name=Thaps23988;logic_name=jgi_thaps3 chr9 ensembl transcript 554300 565632 . - . ID=Thaps23988;Parent=Thaps23988;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 554300 554442 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=26 chr9 . exon 554300 554442 . - . ID=Thaps23988.26;Parent=Thaps23988;constitutive=1;ensembl_end_phase=2;rank=26 chr9 . CDS 554525 554615 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=25 chr9 . exon 554525 554615 . - . ID=Thaps23988.25;Parent=Thaps23988;constitutive=1;ensembl_end_phase=1;rank=25 chr9 . CDS 554701 554723 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=24 chr9 . exon 554701 554723 . - . ID=Thaps23988.24;Parent=Thaps23988;constitutive=1;ensembl_end_phase=2;rank=24 chr9 . CDS 554816 555073 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=23 chr9 . exon 554816 555073 . - . ID=Thaps23988.23;Parent=Thaps23988;constitutive=1;rank=23 chr9 . CDS 555155 556114 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=22 chr9 . exon 555155 556114 . - . ID=Thaps23988.22;Parent=Thaps23988;constitutive=1;rank=22 chr9 . CDS 556207 556334 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=21 chr9 . CDS 556442 556488 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=20 chr9 . CDS 556585 556669 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=19 chr9 . CDS 556750 557313 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=18 chr9 . CDS 557402 557482 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=17 chr9 . CDS 557563 557715 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=16 chr9 . CDS 557823 558428 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=15 chr9 . CDS 558506 558594 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=14 chr9 . CDS 558680 558947 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=13 chr9 . CDS 559051 559154 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=12 chr9 . CDS 559220 559335 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=11 chr9 . CDS 559422 561469 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=10 chr9 . CDS 561571 561732 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=9 chr9 . CDS 561809 561991 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=8 chr9 . CDS 562060 562221 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=7 chr9 . CDS 562307 562533 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=6 chr9 . CDS 562621 563385 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=5 chr9 . CDS 563484 564123 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=4 chr9 . CDS 564217 564306 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=3 chr9 . CDS 564393 564855 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=2 chr9 . CDS 564951 565632 . - 0 ID=Thaps23988;Parent=Thaps23988;rank=1 chr9 ensembl protein_coding_gene 546366 547167 . + . ID=Thaps8028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C872];external_name=Thaps8028;logic_name=jgi_thaps3 chr9 ensembl transcript 546366 547167 . + . ID=Thaps8028;Parent=Thaps8028;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 546366 546719 . + 0 ID=Thaps8028;Parent=Thaps8028;rank=1 chr9 . exon 546366 546719 . + . ID=Thaps8028.1;Parent=Thaps8028;constitutive=1;rank=1 chr9 . CDS 546838 547167 . + 0 ID=Thaps8028;Parent=Thaps8028;rank=2 chr9 . exon 546838 547167 . + . ID=Thaps8028.2;Parent=Thaps8028;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 553030 554025 . + . ID=Thaps8031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C875];external_name=Thaps8031;logic_name=jgi_thaps3 chr9 ensembl transcript 553030 554025 . + . ID=Thaps8031;Parent=Thaps8031;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 553030 553184 . + 0 ID=Thaps8031;Parent=Thaps8031;rank=1 chr9 . exon 553030 553184 . + . ID=Thaps8031.1;Parent=Thaps8031;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 553257 554025 . + 0 ID=Thaps8031;Parent=Thaps8031;rank=2 chr9 . exon 553257 554025 . + . ID=Thaps8031.2;Parent=Thaps8031;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . exon 556207 556334 . - . ID=Thaps23988.21;Parent=Thaps23988;constitutive=1;ensembl_end_phase=2;rank=21 chr9 . exon 556442 556488 . - . ID=Thaps23988.20;Parent=Thaps23988;constitutive=1;ensembl_end_phase=2;rank=20 chr9 . exon 556585 556669 . - . ID=Thaps23988.19;Parent=Thaps23988;constitutive=1;ensembl_end_phase=1;rank=19 chr9 . exon 556750 557313 . - . ID=Thaps23988.18;Parent=Thaps23988;constitutive=1;rank=18 chr9 . exon 557402 557482 . - . ID=Thaps23988.17;Parent=Thaps23988;constitutive=1;rank=17 chr9 . exon 557563 557715 . - . ID=Thaps23988.16;Parent=Thaps23988;constitutive=1;rank=16 chr9 . exon 557823 558428 . - . ID=Thaps23988.15;Parent=Thaps23988;constitutive=1;rank=15 chr9 . exon 558506 558594 . - . ID=Thaps23988.14;Parent=Thaps23988;constitutive=1;ensembl_end_phase=2;rank=14 chr9 . exon 558680 558947 . - . ID=Thaps23988.13;Parent=Thaps23988;constitutive=1;ensembl_end_phase=1;rank=13 chr9 . exon 559051 559154 . - . ID=Thaps23988.12;Parent=Thaps23988;constitutive=1;ensembl_end_phase=2;rank=12 chr9 . exon 559220 559335 . - . ID=Thaps23988.11;Parent=Thaps23988;constitutive=1;ensembl_end_phase=2;rank=11 chr9 . exon 559422 561469 . - . ID=Thaps23988.10;Parent=Thaps23988;constitutive=1;ensembl_end_phase=2;rank=10 chr9 . exon 561571 561732 . - . ID=Thaps23988.9;Parent=Thaps23988;constitutive=1;rank=9 chr9 . exon 561809 561991 . - . ID=Thaps23988.8;Parent=Thaps23988;constitutive=1;rank=8 chr9 . exon 562060 562221 . - . ID=Thaps23988.7;Parent=Thaps23988;constitutive=1;rank=7 chr9 . exon 562307 562533 . - . ID=Thaps23988.6;Parent=Thaps23988;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . exon 562621 563385 . - . ID=Thaps23988.5;Parent=Thaps23988;constitutive=1;rank=5 chr9 . exon 563484 564123 . - . ID=Thaps23988.4;Parent=Thaps23988;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . exon 564217 564306 . - . ID=Thaps23988.3;Parent=Thaps23988;constitutive=1;rank=3 chr9 . exon 564393 564855 . - . ID=Thaps23988.2;Parent=Thaps23988;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . exon 564951 565632 . - . ID=Thaps23988.1;Parent=Thaps23988;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . biological_region 570780 570781 0.999 + . logic_name=eponine chr9 . repeat_region 570905 570946 . ? . description=trf chr9 . repeat_region 572324 572331 . ? . description=dust chr9 ensembl protein_coding_gene 568402 571008 . - . ID=Thaps23989;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C878];external_name=Thaps23989;logic_name=jgi_thaps3 chr9 ensembl transcript 568402 571008 . - . ID=Thaps23989;Parent=Thaps23989;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 568402 571008 . - 0 ID=Thaps23989;Parent=Thaps23989;rank=1 chr9 . exon 568402 571008 . - . ID=Thaps23989.1;Parent=Thaps23989;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 571369 571626 . + . ID=Thaps36108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C879];external_name=Thaps36108;logic_name=jgi_thaps3 chr9 ensembl transcript 571369 571626 . + . ID=Thaps36108;Parent=Thaps36108;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 571369 571626 . + 0 ID=Thaps36108;Parent=Thaps36108;rank=1 chr9 . exon 571369 571626 . + . ID=Thaps36108.1;Parent=Thaps36108;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 567477 568073 . + . ID=Thaps8033;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C877];external_name=Thaps8033;logic_name=jgi_thaps3 chr9 ensembl transcript 567477 568073 . + . ID=Thaps8033;Parent=Thaps8033;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 567477 567551 . + 0 ID=Thaps8033;Parent=Thaps8033;rank=1 chr9 . exon 567477 567551 . + . ID=Thaps8033.1;Parent=Thaps8033;constitutive=1;rank=1 chr9 . CDS 567656 567994 . + 0 ID=Thaps8033;Parent=Thaps8033;rank=2 chr9 . exon 567656 567994 . + . ID=Thaps8033.2;Parent=Thaps8033;constitutive=1;rank=2 chr9 . CDS 568026 568073 . + 0 ID=Thaps8033;Parent=Thaps8033;rank=3 chr9 . exon 568026 568073 . + . ID=Thaps8033.3;Parent=Thaps8033;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 571833 575286 . - . ID=Thaps8035;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C880];external_name=Thaps8035;logic_name=jgi_thaps3 chr9 ensembl transcript 571833 575286 . - . ID=Thaps8035;Parent=Thaps8035;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 571833 572306 . - 0 ID=Thaps8035;Parent=Thaps8035;rank=3 chr9 . exon 571833 572306 . - . ID=Thaps8035.3;Parent=Thaps8035;constitutive=1;rank=3 chr9 . CDS 572385 572575 . - 0 ID=Thaps8035;Parent=Thaps8035;rank=2 chr9 . exon 572385 572575 . - . ID=Thaps8035.2;Parent=Thaps8035;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 572667 575286 . - 0 ID=Thaps8035;Parent=Thaps8035;rank=1 chr9 . exon 572667 575286 . - . ID=Thaps8035.1;Parent=Thaps8035;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 578116 580143 . - . ID=Thaps23990;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C882];external_name=Thaps23990;logic_name=jgi_thaps3 chr9 ensembl transcript 578116 580143 . - . ID=Thaps23990;Parent=Thaps23990;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 578116 580143 . - 0 ID=Thaps23990;Parent=Thaps23990;rank=1 chr9 . exon 578116 580143 . - . ID=Thaps23990.1;Parent=Thaps23990;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 581848 583803 . - . ID=Thaps23991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C884];external_name=Thaps23991;logic_name=jgi_thaps3 chr9 ensembl transcript 581848 583803 . - . ID=Thaps23991;Parent=Thaps23991;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 581848 582187 . - 0 ID=Thaps23991;Parent=Thaps23991;rank=2 chr9 . exon 581848 582187 . - . ID=Thaps23991.2;Parent=Thaps23991;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 582281 583803 . - 0 ID=Thaps23991;Parent=Thaps23991;rank=1 chr9 . exon 582281 583803 . - . ID=Thaps23991.1;Parent=Thaps23991;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 584091 584941 . + . ID=Thaps263538;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C885];external_name=Thaps263538;logic_name=jgi_thaps3 chr9 ensembl transcript 584091 584941 . + . ID=Thaps263538;Parent=Thaps263538;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 584091 584941 . + 0 ID=Thaps263538;Parent=Thaps263538;rank=1 chr9 . exon 584091 584941 . + . ID=Thaps263538.1;Parent=Thaps263538;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 575729 576680 . + . ID=Thaps8036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C881];external_name=Thaps8036;logic_name=jgi_thaps3 chr9 ensembl transcript 575729 576680 . + . ID=Thaps8036;Parent=Thaps8036;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 575729 576083 . + 0 ID=Thaps8036;Parent=Thaps8036;rank=1 chr9 . exon 575729 576083 . + . ID=Thaps8036.1;Parent=Thaps8036;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 576169 576680 . + 0 ID=Thaps8036;Parent=Thaps8036;rank=2 chr9 . exon 576169 576680 . + . ID=Thaps8036.2;Parent=Thaps8036;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 580654 581706 . + . ID=Thaps8038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C883];external_name=Thaps8038;logic_name=jgi_thaps3 chr9 ensembl transcript 580654 581706 . + . ID=Thaps8038;Parent=Thaps8038;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 580654 581706 . + 0 ID=Thaps8038;Parent=Thaps8038;rank=1 chr9 . exon 580654 581706 . + . ID=Thaps8038.1;Parent=Thaps8038;constitutive=1;rank=1 chr9 . repeat_region 587657 587677 . ? . description=trf chr9 . repeat_region 587657 587713 . ? . description=dust chr9 . repeat_region 587676 587713 . ? . description=trf chr9 . repeat_region 595177 595195 . ? . description=dust chr9 ensembl protein_coding_gene 589536 596429 . - . ID=Thaps23992;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C888];external_name=Thaps23992;logic_name=jgi_thaps3 chr9 ensembl transcript 589536 596429 . - . ID=Thaps23992;Parent=Thaps23992;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 589536 591097 . - 0 ID=Thaps23992;Parent=Thaps23992;rank=3 chr9 . exon 589536 591097 . - . ID=Thaps23992.3;Parent=Thaps23992;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 591187 591543 . - 0 ID=Thaps23992;Parent=Thaps23992;rank=2 chr9 . exon 591187 591543 . - . ID=Thaps23992.2;Parent=Thaps23992;constitutive=1;rank=2 chr9 . CDS 591623 596429 . - 0 ID=Thaps23992;Parent=Thaps23992;rank=1 chr9 . exon 591623 596429 . - . ID=Thaps23992.1;Parent=Thaps23992;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 587010 587396 . - . ID=Thaps8041;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C886];external_name=Thaps8041;logic_name=jgi_thaps3 chr9 ensembl transcript 587010 587396 . - . ID=Thaps8041;Parent=Thaps8041;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 587010 587168 . - 0 ID=Thaps8041;Parent=Thaps8041;rank=2 chr9 . exon 587010 587168 . - . ID=Thaps8041.2;Parent=Thaps8041;constitutive=1;rank=2 chr9 . CDS 587253 587396 . - 0 ID=Thaps8041;Parent=Thaps8041;rank=1 chr9 . exon 587253 587396 . - . ID=Thaps8041.1;Parent=Thaps8041;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 587949 589229 . + . ID=Thaps8042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C887];external_name=Thaps8042;logic_name=jgi_thaps3 chr9 ensembl transcript 587949 589229 . + . ID=Thaps8042;Parent=Thaps8042;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 587949 588217 . + 0 ID=Thaps8042;Parent=Thaps8042;rank=1 chr9 . exon 587949 588217 . + . ID=Thaps8042.1;Parent=Thaps8042;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 588265 588302 . + 0 ID=Thaps8042;Parent=Thaps8042;rank=2 chr9 . exon 588265 588302 . + . ID=Thaps8042.2;Parent=Thaps8042;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 588334 589229 . + 0 ID=Thaps8042;Parent=Thaps8042;rank=3 chr9 . exon 588334 589229 . + . ID=Thaps8042.3;Parent=Thaps8042;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . biological_region 604954 604955 0.999 - . logic_name=eponine chr9 ensembl protein_coding_gene 598304 598999 . + . ID=Thaps23993;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C890];external_name=Thaps23993;logic_name=jgi_thaps3 chr9 ensembl transcript 598304 598999 . + . ID=Thaps23993;Parent=Thaps23993;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 598304 598999 . + 0 ID=Thaps23993;Parent=Thaps23993;rank=1 chr9 . exon 598304 598999 . + . ID=Thaps23993.1;Parent=Thaps23993;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 599575 603276 . + . ID=Thaps23994;biotype=protein_coding;description=Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8C891];external_name=Thaps23994;logic_name=jgi_thaps3 chr9 ensembl transcript 599575 603276 . + . ID=Thaps23994;Parent=Thaps23994;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 599575 599708 . + 0 ID=Thaps23994;Parent=Thaps23994;rank=1 chr9 . exon 599575 599708 . + . ID=Thaps23994.1;Parent=Thaps23994;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 599749 600124 . + 0 ID=Thaps23994;Parent=Thaps23994;rank=2 chr9 . exon 599749 600124 . + . ID=Thaps23994.2;Parent=Thaps23994;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 600169 602456 . + 0 ID=Thaps23994;Parent=Thaps23994;rank=3 chr9 . exon 600169 602456 . + . ID=Thaps23994.3;Parent=Thaps23994;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 602535 602711 . + 0 ID=Thaps23994;Parent=Thaps23994;rank=4 chr9 . exon 602535 602711 . + . ID=Thaps23994.4;Parent=Thaps23994;constitutive=1;rank=4 chr9 . CDS 602795 602918 . + 0 ID=Thaps23994;Parent=Thaps23994;rank=5 chr9 . exon 602795 602918 . + . ID=Thaps23994.5;Parent=Thaps23994;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 603001 603276 . + 0 ID=Thaps23994;Parent=Thaps23994;rank=6 chr9 . exon 603001 603276 . + . ID=Thaps23994.6;Parent=Thaps23994;constitutive=1;rank=6 chr9 ensembl protein_coding_gene 603623 605467 . - . ID=Thaps36275;biotype=protein_coding;description=Histone acetyltransferase MOZ/SAS-type hat [Source:UniProtKB/TrEMBL%3BAcc:B8C892];external_name=Thaps36275;logic_name=jgi_thaps3 chr9 ensembl transcript 603623 605467 . - . ID=Thaps36275;Parent=Thaps36275;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 603623 604086 . - 0 ID=Thaps36275;Parent=Thaps36275;rank=4 chr9 . exon 603623 604086 . - . ID=Thaps36275.4;Parent=Thaps36275;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 604176 604316 . - 0 ID=Thaps36275;Parent=Thaps36275;rank=3 chr9 . exon 604176 604316 . - . ID=Thaps36275.3;Parent=Thaps36275;constitutive=1;rank=3 chr9 . CDS 604408 604750 . - 0 ID=Thaps36275;Parent=Thaps36275;rank=2 chr9 . exon 604408 604750 . - . ID=Thaps36275.2;Parent=Thaps36275;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 605384 605467 . - 0 ID=Thaps36275;Parent=Thaps36275;rank=1 chr9 . exon 605384 605467 . - . ID=Thaps36275.1;Parent=Thaps36275;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 596884 597855 . + . ID=Thaps8044;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C889];external_name=Thaps8044;logic_name=jgi_thaps3 chr9 ensembl transcript 596884 597855 . + . ID=Thaps8044;Parent=Thaps8044;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 596884 597403 . + 0 ID=Thaps8044;Parent=Thaps8044;rank=1 chr9 . exon 596884 597403 . + . ID=Thaps8044.1;Parent=Thaps8044;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 597499 597551 . + 0 ID=Thaps8044;Parent=Thaps8044;rank=2 chr9 . exon 597499 597551 . + . ID=Thaps8044.2;Parent=Thaps8044;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 597661 597855 . + 0 ID=Thaps8044;Parent=Thaps8044;rank=3 chr9 . exon 597661 597855 . + . ID=Thaps8044.3;Parent=Thaps8044;constitutive=1;rank=3 chr9 . repeat_region 606159 606219 . ? . description=dust chr9 . repeat_region 612318 612330 . ? . description=dust chr9 . repeat_region 614575 614656 . ? . description=trf chr9 ensembl protein_coding_gene 607076 607817 . - . ID=Thaps23996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C893];external_name=Thaps23996;logic_name=jgi_thaps3 chr9 ensembl transcript 607076 607817 . - . ID=Thaps23996;Parent=Thaps23996;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 607076 607111 . - 0 ID=Thaps23996;Parent=Thaps23996;rank=2 chr9 . exon 607076 607111 . - . ID=Thaps23996.2;Parent=Thaps23996;constitutive=1;rank=2 chr9 . CDS 607137 607817 . - 0 ID=Thaps23996;Parent=Thaps23996;rank=1 chr9 . exon 607137 607817 . - . ID=Thaps23996.1;Parent=Thaps23996;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 608213 608824 . - . ID=Thaps29322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C894];external_name=Thaps29322;logic_name=jgi_thaps3 chr9 ensembl transcript 608213 608824 . - . ID=Thaps29322;Parent=Thaps29322;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 608213 608824 . - 0 ID=Thaps29322;Parent=Thaps29322;rank=1 chr9 . exon 608213 608824 . - . ID=Thaps29322.1;Parent=Thaps29322;constitutive=1;rank=1 chr9 . repeat_region 617581 617658 . + . description=Copia9LTR_TP chr9 . repeat_region 626097 626149 . ? . description=trf chr9 . repeat_region 626136 626155 . ? . description=trf chr9 . repeat_region 626136 626155 . ? . description=dust chr9 . repeat_region 628454 628461 . ? . description=dust chr9 . repeat_region 628533 628541 . ? . description=dust chr9 . repeat_region 634900 634907 . ? . description=dust chr9 ensembl protein_coding_gene 628577 628939 . + . ID=Thaps263540;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C895];external_name=Thaps263540;logic_name=jgi_thaps3 chr9 ensembl transcript 628577 628939 . + . ID=Thaps263540;Parent=Thaps263540;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 628577 628939 . + 0 ID=Thaps263540;Parent=Thaps263540;rank=1 chr9 . exon 628577 628939 . + . ID=Thaps263540.1;Parent=Thaps263540;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 633435 634499 . - . ID=Thaps263542;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C897];external_name=Thaps263542;logic_name=jgi_thaps3 chr9 ensembl transcript 633435 634499 . - . ID=Thaps263542;Parent=Thaps263542;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 633435 634000 . - 0 ID=Thaps263542;Parent=Thaps263542;rank=2 chr9 . exon 633435 634000 . - . ID=Thaps263542.2;Parent=Thaps263542;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 634022 634499 . - 0 ID=Thaps263542;Parent=Thaps263542;rank=1 chr9 . exon 634022 634499 . - . ID=Thaps263542.1;Parent=Thaps263542;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 630129 632570 . - . ID=Thaps8051;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C896];external_name=Thaps8051;logic_name=jgi_thaps3 chr9 ensembl transcript 630129 632570 . - . ID=Thaps8051;Parent=Thaps8051;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 630129 631910 . - 0 ID=Thaps8051;Parent=Thaps8051;rank=2 chr9 . exon 630129 631910 . - . ID=Thaps8051.2;Parent=Thaps8051;constitutive=1;rank=2 chr9 . CDS 632022 632570 . - 0 ID=Thaps8051;Parent=Thaps8051;rank=1 chr9 . exon 632022 632570 . - . ID=Thaps8051.1;Parent=Thaps8051;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 638618 639487 . + . ID=Thaps36303;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C898];external_name=Thaps36303;logic_name=jgi_thaps3 chr9 ensembl transcript 638618 639487 . + . ID=Thaps36303;Parent=Thaps36303;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 638618 639487 . + 0 ID=Thaps36303;Parent=Thaps36303;rank=1 chr9 . exon 638618 639487 . + . ID=Thaps36303.1;Parent=Thaps36303;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 640859 642710 . + . ID=Thaps8054;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C899];external_name=Thaps8054;logic_name=jgi_thaps3 chr9 ensembl transcript 640859 642710 . + . ID=Thaps8054;Parent=Thaps8054;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 640859 641902 . + 0 ID=Thaps8054;Parent=Thaps8054;rank=1 chr9 . exon 640859 641902 . + . ID=Thaps8054.1;Parent=Thaps8054;constitutive=1;rank=1 chr9 . CDS 642002 642115 . + 0 ID=Thaps8054;Parent=Thaps8054;rank=2 chr9 . exon 642002 642115 . + . ID=Thaps8054.2;Parent=Thaps8054;constitutive=1;rank=2 chr9 . CDS 642255 642433 . + 0 ID=Thaps8054;Parent=Thaps8054;rank=3 chr9 . exon 642255 642433 . + . ID=Thaps8054.3;Parent=Thaps8054;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 642536 642710 . + 0 ID=Thaps8054;Parent=Thaps8054;rank=4 chr9 . exon 642536 642710 . + . ID=Thaps8054.4;Parent=Thaps8054;constitutive=1;ensembl_end_phase=1;rank=4 chr9 ensembl protein_coding_gene 643070 643996 . + . ID=Thaps8055;biotype=protein_coding;description=Putative uncharacterized protein HSF6 [Source:UniProtKB/TrEMBL%3BAcc:B8C8A0];external_name=HSF6;logic_name=jgi_thaps3 chr9 ensembl transcript 643070 643996 . + . ID=Thaps8055;Parent=Thaps8055;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 643070 643202 . + 0 ID=Thaps8055;Parent=Thaps8055;rank=1 chr9 . exon 643070 643202 . + . ID=Thaps8055.1;Parent=Thaps8055;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 643308 643996 . + 0 ID=Thaps8055;Parent=Thaps8055;rank=2 chr9 . exon 643308 643996 . + . ID=Thaps8055.2;Parent=Thaps8055;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . repeat_region 648931 648950 . ? . description=trf chr9 . repeat_region 649481 649519 . ? . description=trf chr9 ensembl protein_coding_gene 645584 649664 . - . ID=Thaps24000;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8A1];external_name=Thaps24000;logic_name=jgi_thaps3 chr9 ensembl transcript 645584 649664 . - . ID=Thaps24000;Parent=Thaps24000;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 645584 647241 . - 0 ID=Thaps24000;Parent=Thaps24000;rank=3 chr9 . exon 645584 647241 . - . ID=Thaps24000.3;Parent=Thaps24000;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 647336 647963 . - 0 ID=Thaps24000;Parent=Thaps24000;rank=2 chr9 . exon 647336 647963 . - . ID=Thaps24000.2;Parent=Thaps24000;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 648006 649664 . - 0 ID=Thaps24000;Parent=Thaps24000;rank=1 chr9 . exon 648006 649664 . - . ID=Thaps24000.1;Parent=Thaps24000;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 654982 656142 . + . ID=Thaps24002;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8A4];external_name=Thaps24002;logic_name=jgi_thaps3 chr9 ensembl transcript 654982 656142 . + . ID=Thaps24002;Parent=Thaps24002;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 654982 655038 . + 0 ID=Thaps24002;Parent=Thaps24002;rank=1 chr9 . exon 654982 655038 . + . ID=Thaps24002.1;Parent=Thaps24002;constitutive=1;rank=1 chr9 . CDS 655272 655313 . + 0 ID=Thaps24002;Parent=Thaps24002;rank=2 chr9 . CDS 655411 656142 . + 0 ID=Thaps24002;Parent=Thaps24002;rank=3 chr9 ensembl protein_coding_gene 651395 651946 . + . ID=Thaps29327;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8A2];external_name=Thaps29327;logic_name=jgi_thaps3 chr9 ensembl transcript 651395 651946 . + . ID=Thaps29327;Parent=Thaps29327;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 651395 651707 . + 0 ID=Thaps29327;Parent=Thaps29327;rank=1 chr9 . exon 651395 651707 . + . ID=Thaps29327.1;Parent=Thaps29327;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 651771 651946 . + 0 ID=Thaps29327;Parent=Thaps29327;rank=2 chr9 . exon 651771 651946 . + . ID=Thaps29327.2;Parent=Thaps29327;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 652664 654500 . - . ID=Thaps8058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8A3];external_name=Thaps8058;logic_name=jgi_thaps3 chr9 ensembl transcript 652664 654500 . - . ID=Thaps8058;Parent=Thaps8058;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 652664 652746 . - 0 ID=Thaps8058;Parent=Thaps8058;rank=5 chr9 . exon 652664 652746 . - . ID=Thaps8058.5;Parent=Thaps8058;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 652827 653115 . - 0 ID=Thaps8058;Parent=Thaps8058;rank=4 chr9 . exon 652827 653115 . - . ID=Thaps8058.4;Parent=Thaps8058;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 653229 653613 . - 0 ID=Thaps8058;Parent=Thaps8058;rank=3 chr9 . exon 653229 653613 . - . ID=Thaps8058.3;Parent=Thaps8058;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 653766 654031 . - 0 ID=Thaps8058;Parent=Thaps8058;rank=2 chr9 . exon 653766 654031 . - . ID=Thaps8058.2;Parent=Thaps8058;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 654417 654500 . - 0 ID=Thaps8058;Parent=Thaps8058;rank=1 chr9 . exon 654417 654500 . - . ID=Thaps8058.1;Parent=Thaps8058;constitutive=1;rank=1 chr9 . repeat_region 656034 656041 . ? . description=dust chr9 . exon 655272 655313 . + . ID=Thaps24002.2;Parent=Thaps24002;constitutive=1;rank=2 chr9 . exon 655411 656142 . + . ID=Thaps24002.3;Parent=Thaps24002;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 656428 659187 . + . ID=Thaps24003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8A5];external_name=Thaps24003;logic_name=jgi_thaps3 chr9 ensembl transcript 656428 659187 . + . ID=Thaps24003;Parent=Thaps24003;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 656428 657062 . + 0 ID=Thaps24003;Parent=Thaps24003;rank=1 chr9 . exon 656428 657062 . + . ID=Thaps24003.1;Parent=Thaps24003;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 657111 658754 . + 0 ID=Thaps24003;Parent=Thaps24003;rank=2 chr9 . exon 657111 658754 . + . ID=Thaps24003.2;Parent=Thaps24003;constitutive=1;rank=2 chr9 . CDS 658917 659187 . + 0 ID=Thaps24003;Parent=Thaps24003;rank=3 chr9 . exon 658917 659187 . + . ID=Thaps24003.3;Parent=Thaps24003;constitutive=1;ensembl_end_phase=1;rank=3 chr9 ensembl protein_coding_gene 659709 660938 . + . ID=Thaps24004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8A6];external_name=Thaps24004;logic_name=jgi_thaps3 chr9 ensembl transcript 659709 660938 . + . ID=Thaps24004;Parent=Thaps24004;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 659709 660938 . + 0 ID=Thaps24004;Parent=Thaps24004;rank=1 chr9 . exon 659709 660938 . + . ID=Thaps24004.1;Parent=Thaps24004;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 661322 662650 . + . ID=Thaps8062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8A7];external_name=Thaps8062;logic_name=jgi_thaps3 chr9 ensembl transcript 661322 662650 . + . ID=Thaps8062;Parent=Thaps8062;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 661322 661891 . + 0 ID=Thaps8062;Parent=Thaps8062;rank=1 chr9 . exon 661322 661891 . + . ID=Thaps8062.1;Parent=Thaps8062;constitutive=1;rank=1 chr9 . CDS 661979 662650 . + 0 ID=Thaps8062;Parent=Thaps8062;rank=2 chr9 . exon 661979 662650 . + . ID=Thaps8062.2;Parent=Thaps8062;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 662770 663792 . - . ID=Thaps8063;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8A8];external_name=Thaps8063;logic_name=jgi_thaps3 chr9 ensembl transcript 662770 663792 . - . ID=Thaps8063;Parent=Thaps8063;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 662770 663792 . - 0 ID=Thaps8063;Parent=Thaps8063;rank=1 chr9 . exon 662770 663792 . - . ID=Thaps8063.1;Parent=Thaps8063;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 664307 665086 . + . ID=Thaps8064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8A9];external_name=Thaps8064;logic_name=jgi_thaps3 chr9 ensembl transcript 664307 665086 . + . ID=Thaps8064;Parent=Thaps8064;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 664307 665086 . + 0 ID=Thaps8064;Parent=Thaps8064;rank=1 chr9 . exon 664307 665086 . + . ID=Thaps8064.1;Parent=Thaps8064;constitutive=1;rank=1 chr9 . repeat_region 667641 667667 . ? . description=trf chr9 . repeat_region 668360 668405 . ? . description=trf chr9 ensembl protein_coding_gene 667910 668383 . - . ID=Thaps17815;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8B1];external_name=Thaps17815;logic_name=jgi_thaps3 chr9 ensembl transcript 667910 668383 . - . ID=Thaps17815;Parent=Thaps17815;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 667910 668383 . - 0 ID=Thaps17815;Parent=Thaps17815;rank=1 chr9 . exon 667910 668383 . - . ID=Thaps17815.1;Parent=Thaps17815;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 673922 676985 . - . ID=Thaps24007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8B5];external_name=Thaps24007;logic_name=jgi_thaps3 chr9 ensembl transcript 673922 676985 . - . ID=Thaps24007;Parent=Thaps24007;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 673922 674011 . - 0 ID=Thaps24007;Parent=Thaps24007;rank=2 chr9 . exon 673922 674011 . - . ID=Thaps24007.2;Parent=Thaps24007;constitutive=1;rank=2 chr9 . CDS 674094 676985 . - 0 ID=Thaps24007;Parent=Thaps24007;rank=1 chr9 . exon 674094 676985 . - . ID=Thaps24007.1;Parent=Thaps24007;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 665450 666061 . + . ID=Thaps8065;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8B0];external_name=Thaps8065;logic_name=jgi_thaps3 chr9 ensembl transcript 665450 666061 . + . ID=Thaps8065;Parent=Thaps8065;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 665450 666061 . + 0 ID=Thaps8065;Parent=Thaps8065;rank=1 chr9 . exon 665450 666061 . + . ID=Thaps8065.1;Parent=Thaps8065;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 668930 669385 . + . ID=Thaps8067;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8B2];external_name=Thaps8067;logic_name=jgi_thaps3 chr9 ensembl transcript 668930 669385 . + . ID=Thaps8067;Parent=Thaps8067;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 668930 669385 . + 0 ID=Thaps8067;Parent=Thaps8067;rank=1 chr9 . exon 668930 669385 . + . ID=Thaps8067.1;Parent=Thaps8067;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 669512 670658 . + . ID=Thaps8068;biotype=protein_coding;description=Calcium/proton exchanger%2C calcium antiporter [Source:UniProtKB/TrEMBL%3BAcc:B8C8B3];external_name=Thaps8068;logic_name=jgi_thaps3 chr9 ensembl transcript 669512 670658 . + . ID=Thaps8068;Parent=Thaps8068;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 669512 670310 . + 0 ID=Thaps8068;Parent=Thaps8068;rank=1 chr9 . exon 669512 670310 . + . ID=Thaps8068.1;Parent=Thaps8068;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 670399 670658 . + 0 ID=Thaps8068;Parent=Thaps8068;rank=2 chr9 . exon 670399 670658 . + . ID=Thaps8068.2;Parent=Thaps8068;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 671390 673234 . - . ID=Thaps8069;biotype=protein_coding;description=Tubulin beta [Source:UniProtKB/TrEMBL%3BAcc:B8C8B4];external_name=TUB2;logic_name=jgi_thaps3 chr9 ensembl transcript 671390 673234 . - . ID=Thaps8069;Parent=Thaps8069;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 671390 671487 . - 0 ID=Thaps8069;Parent=Thaps8069;rank=5 chr9 . exon 671390 671487 . - . ID=Thaps8069.5;Parent=Thaps8069;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 671586 672533 . - 0 ID=Thaps8069;Parent=Thaps8069;rank=4 chr9 . exon 671586 672533 . - . ID=Thaps8069.4;Parent=Thaps8069;constitutive=1;rank=4 chr9 . CDS 672657 672842 . - 0 ID=Thaps8069;Parent=Thaps8069;rank=3 chr9 . exon 672657 672842 . - . ID=Thaps8069.3;Parent=Thaps8069;constitutive=1;rank=3 chr9 . CDS 673027 673060 . - 0 ID=Thaps8069;Parent=Thaps8069;rank=2 chr9 . exon 673027 673060 . - . ID=Thaps8069.2;Parent=Thaps8069;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 673169 673234 . - 0 ID=Thaps8069;Parent=Thaps8069;rank=1 chr9 . exon 673169 673234 . - . ID=Thaps8069.1;Parent=Thaps8069;constitutive=1;rank=1 chr9 . repeat_region 676668 676690 . ? . description=dust chr9 . repeat_region 678953 678960 . ? . description=dust chr9 . repeat_region 679578 679599 . ? . description=dust chr9 ensembl protein_coding_gene 677267 679502 . + . ID=Thaps24008;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8B6];external_name=Thaps24008;logic_name=jgi_thaps3 chr9 ensembl transcript 677267 679502 . + . ID=Thaps24008;Parent=Thaps24008;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 677267 677615 . + 0 ID=Thaps24008;Parent=Thaps24008;rank=1 chr9 . exon 677267 677615 . + . ID=Thaps24008.1;Parent=Thaps24008;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 677763 678898 . + 0 ID=Thaps24008;Parent=Thaps24008;rank=2 chr9 . exon 677763 678898 . + . ID=Thaps24008.2;Parent=Thaps24008;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 678954 679502 . + 0 ID=Thaps24008;Parent=Thaps24008;rank=3 chr9 . exon 678954 679502 . + . ID=Thaps24008.3;Parent=Thaps24008;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 680317 680607 . - . ID=Thaps36091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8B7];external_name=Thaps36091;logic_name=jgi_thaps3 chr9 ensembl transcript 680317 680607 . - . ID=Thaps36091;Parent=Thaps36091;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 680317 680607 . - 0 ID=Thaps36091;Parent=Thaps36091;rank=1 chr9 . exon 680317 680607 . - . ID=Thaps36091.1;Parent=Thaps36091;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 680923 681159 . - . ID=Thaps36139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8B8];external_name=Thaps36139;logic_name=jgi_thaps3 chr9 ensembl transcript 680923 681159 . - . ID=Thaps36139;Parent=Thaps36139;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 680923 681159 . - 0 ID=Thaps36139;Parent=Thaps36139;rank=1 chr9 . exon 680923 681159 . - . ID=Thaps36139.1;Parent=Thaps36139;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 683920 686208 . + . ID=Thaps36235;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8C0];external_name=Thaps36235;logic_name=jgi_thaps3 chr9 ensembl transcript 683920 686208 . + . ID=Thaps36235;Parent=Thaps36235;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 683920 684549 . + 0 ID=Thaps36235;Parent=Thaps36235;rank=1 chr9 . exon 683920 684549 . + . ID=Thaps36235.1;Parent=Thaps36235;constitutive=1;rank=1 chr9 . CDS 684641 685198 . + 0 ID=Thaps36235;Parent=Thaps36235;rank=2 chr9 . exon 684641 685198 . + . ID=Thaps36235.2;Parent=Thaps36235;constitutive=1;rank=2 chr9 . CDS 685302 685832 . + 0 ID=Thaps36235;Parent=Thaps36235;rank=3 chr9 . CDS 685927 686208 . + 0 ID=Thaps36235;Parent=Thaps36235;rank=4 chr9 ensembl protein_coding_gene 681894 683054 . + . ID=Thaps8073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8B9];external_name=Thaps8073;logic_name=jgi_thaps3 chr9 ensembl transcript 681894 683054 . + . ID=Thaps8073;Parent=Thaps8073;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 681894 683054 . + 0 ID=Thaps8073;Parent=Thaps8073;rank=1 chr9 . exon 681894 683054 . + . ID=Thaps8073.1;Parent=Thaps8073;constitutive=1;rank=1 chr9 . repeat_region 688177 688251 . ? . description=trf chr9 . biological_region 693057 693060 0.999 - . logic_name=eponine chr9 . exon 685302 685832 . + . ID=Thaps36235.3;Parent=Thaps36235;constitutive=1;rank=3 chr9 . exon 685927 686208 . + . ID=Thaps36235.4;Parent=Thaps36235;constitutive=1;rank=4 chr9 ensembl protein_coding_gene 690971 692473 . - . ID=Thaps36291;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8C2];external_name=Thaps36291;logic_name=jgi_thaps3 chr9 ensembl transcript 690971 692473 . - . ID=Thaps36291;Parent=Thaps36291;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 690971 691158 . - 0 ID=Thaps36291;Parent=Thaps36291;rank=4 chr9 . exon 690971 691158 . - . ID=Thaps36291.4;Parent=Thaps36291;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 691241 691364 . - 0 ID=Thaps36291;Parent=Thaps36291;rank=3 chr9 . exon 691241 691364 . - . ID=Thaps36291.3;Parent=Thaps36291;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 691451 692175 . - 0 ID=Thaps36291;Parent=Thaps36291;rank=2 chr9 . exon 691451 692175 . - . ID=Thaps36291.2;Parent=Thaps36291;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 692239 692473 . - 0 ID=Thaps36291;Parent=Thaps36291;rank=1 chr9 . exon 692239 692473 . - . ID=Thaps36291.1;Parent=Thaps36291;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 694429 694809 . + . ID=Thaps36301;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8C3];external_name=Thaps36301;logic_name=jgi_thaps3 chr9 ensembl transcript 694429 694809 . + . ID=Thaps36301;Parent=Thaps36301;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 694429 694809 . + 0 ID=Thaps36301;Parent=Thaps36301;rank=1 chr9 . exon 694429 694809 . + . ID=Thaps36301.1;Parent=Thaps36301;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 688579 690840 . + . ID=Thaps8075;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8C1];external_name=Thaps8075;logic_name=jgi_thaps3 chr9 ensembl transcript 688579 690840 . + . ID=Thaps8075;Parent=Thaps8075;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 688579 690840 . + 0 ID=Thaps8075;Parent=Thaps8075;rank=1 chr9 . exon 688579 690840 . + . ID=Thaps8075.1;Parent=Thaps8075;constitutive=1;rank=1 chr9 . repeat_region 696768 696775 . ? . description=dust chr9 . repeat_region 702848 702867 . ? . description=dust chr9 ensembl protein_coding_gene 701476 701928 . - . ID=Thaps263554;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8C4];external_name=Thaps263554;logic_name=jgi_thaps3 chr9 ensembl transcript 701476 701928 . - . ID=Thaps263554;Parent=Thaps263554;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 701476 701928 . - 0 ID=Thaps263554;Parent=Thaps263554;rank=1 chr9 . exon 701476 701928 . - . ID=Thaps263554.1;Parent=Thaps263554;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 704312 705680 . + . ID=Thaps269434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8C5];external_name=Thaps269434;logic_name=jgi_thaps3 chr9 ensembl transcript 704312 705680 . + . ID=Thaps269434;Parent=Thaps269434;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 704312 705242 . + 0 ID=Thaps269434;Parent=Thaps269434;rank=1 chr9 . exon 704312 705242 . + . ID=Thaps269434.1;Parent=Thaps269434;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 705334 705680 . + 0 ID=Thaps269434;Parent=Thaps269434;rank=2 chr9 . repeat_region 711052 711080 . ? . description=trf chr9 ensembl protein_coding_gene 707320 711741 . - . ID=Thaps24011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8C7];external_name=Thaps24011;logic_name=jgi_thaps3 chr9 ensembl transcript 707320 711741 . - . ID=Thaps24011;Parent=Thaps24011;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 707320 709395 . - 0 ID=Thaps24011;Parent=Thaps24011;rank=5 chr9 . exon 707320 709395 . - . ID=Thaps24011.5;Parent=Thaps24011;constitutive=1;rank=5 chr9 . CDS 709474 710193 . - 0 ID=Thaps24011;Parent=Thaps24011;rank=4 chr9 . exon 709474 710193 . - . ID=Thaps24011.4;Parent=Thaps24011;constitutive=1;rank=4 chr9 . CDS 710267 710296 . - 0 ID=Thaps24011;Parent=Thaps24011;rank=3 chr9 . exon 710267 710296 . - . ID=Thaps24011.3;Parent=Thaps24011;constitutive=1;rank=3 chr9 . CDS 710371 710561 . - 0 ID=Thaps24011;Parent=Thaps24011;rank=2 chr9 . exon 710371 710561 . - . ID=Thaps24011.2;Parent=Thaps24011;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 710607 711741 . - 0 ID=Thaps24011;Parent=Thaps24011;rank=1 chr9 . exon 710607 711741 . - . ID=Thaps24011.1;Parent=Thaps24011;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 712359 713405 . - . ID=Thaps263557;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8C8];external_name=Thaps263557;logic_name=jgi_thaps3 chr9 ensembl transcript 712359 713405 . - . ID=Thaps263557;Parent=Thaps263557;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 712359 712511 . - 0 ID=Thaps263557;Parent=Thaps263557;rank=2 chr9 . exon 712359 712511 . - . ID=Thaps263557.2;Parent=Thaps263557;constitutive=1;rank=2 chr9 . CDS 712613 713405 . - 0 ID=Thaps263557;Parent=Thaps263557;rank=1 chr9 . exon 712613 713405 . - . ID=Thaps263557.1;Parent=Thaps263557;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . exon 705334 705680 . + . ID=Thaps269434.2;Parent=Thaps269434;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 705719 706792 . - . ID=Thaps36183;biotype=protein_coding;description=Heterotrimeric G protein alpha subunit 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C8C6];external_name=GPA1;logic_name=jgi_thaps3 chr9 ensembl transcript 705719 706792 . - . ID=Thaps36183;Parent=Thaps36183;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 705719 706792 . - 0 ID=Thaps36183;Parent=Thaps36183;rank=1 chr9 . exon 705719 706792 . - . ID=Thaps36183.1;Parent=Thaps36183;constitutive=1;rank=1 chr9 . repeat_region 719080 719087 . ? . description=dust chr9 ensembl protein_coding_gene 715035 717206 . + . ID=Thaps24013;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8C9];external_name=Thaps24013;logic_name=jgi_thaps3 chr9 ensembl transcript 715035 717206 . + . ID=Thaps24013;Parent=Thaps24013;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 715035 717206 . + 0 ID=Thaps24013;Parent=Thaps24013;rank=1 chr9 . exon 715035 717206 . + . ID=Thaps24013.1;Parent=Thaps24013;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 717545 718888 . - . ID=Thaps24014;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D0];external_name=Thaps24014;logic_name=jgi_thaps3 chr9 ensembl transcript 717545 718888 . - . ID=Thaps24014;Parent=Thaps24014;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 717545 718888 . - 0 ID=Thaps24014;Parent=Thaps24014;rank=1 chr9 . exon 717545 718888 . - . ID=Thaps24014.1;Parent=Thaps24014;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 719189 720759 . + . ID=Thaps8084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D1];external_name=Thaps8084;logic_name=jgi_thaps3 chr9 ensembl transcript 719189 720759 . + . ID=Thaps8084;Parent=Thaps8084;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 719189 719873 . + 0 ID=Thaps8084;Parent=Thaps8084;rank=1 chr9 . exon 719189 719873 . + . ID=Thaps8084.1;Parent=Thaps8084;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 719974 720243 . + 0 ID=Thaps8084;Parent=Thaps8084;rank=2 chr9 . exon 719974 720243 . + . ID=Thaps8084.2;Parent=Thaps8084;constitutive=1;rank=2 chr9 . CDS 720293 720759 . + 0 ID=Thaps8084;Parent=Thaps8084;rank=3 chr9 . exon 720293 720759 . + . ID=Thaps8084.3;Parent=Thaps8084;constitutive=1;ensembl_end_phase=2;rank=3 chr9 ensembl protein_coding_gene 721060 721611 . - . ID=Thaps8085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D2];external_name=Thaps8085;logic_name=jgi_thaps3 chr9 ensembl transcript 721060 721611 . - . ID=Thaps8085;Parent=Thaps8085;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 721060 721146 . - 0 ID=Thaps8085;Parent=Thaps8085;rank=3 chr9 . exon 721060 721146 . - . ID=Thaps8085.3;Parent=Thaps8085;constitutive=1;rank=3 chr9 . CDS 721231 721293 . - 0 ID=Thaps8085;Parent=Thaps8085;rank=2 chr9 . exon 721231 721293 . - . ID=Thaps8085.2;Parent=Thaps8085;constitutive=1;rank=2 chr9 . CDS 721408 721611 . - 0 ID=Thaps8085;Parent=Thaps8085;rank=1 chr9 . exon 721408 721611 . - . ID=Thaps8085.1;Parent=Thaps8085;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 722102 723348 . + . ID=Thaps8086;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D3];external_name=Thaps8086;logic_name=jgi_thaps3 chr9 ensembl transcript 722102 723348 . + . ID=Thaps8086;Parent=Thaps8086;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 722102 722899 . + 0 ID=Thaps8086;Parent=Thaps8086;rank=1 chr9 . exon 722102 722899 . + . ID=Thaps8086.1;Parent=Thaps8086;constitutive=1;rank=1 chr9 . CDS 722980 723348 . + 0 ID=Thaps8086;Parent=Thaps8086;rank=2 chr9 . exon 722980 723348 . + . ID=Thaps8086.2;Parent=Thaps8086;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 729663 734851 . - . ID=Thaps24015;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D5];external_name=Thaps24015;logic_name=jgi_thaps3 chr9 ensembl transcript 729663 734851 . - . ID=Thaps24015;Parent=Thaps24015;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 729663 729927 . - 0 ID=Thaps24015;Parent=Thaps24015;rank=2 chr9 . exon 729663 729927 . - . ID=Thaps24015.2;Parent=Thaps24015;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 730005 734851 . - 0 ID=Thaps24015;Parent=Thaps24015;rank=1 chr9 . exon 730005 734851 . - . ID=Thaps24015.1;Parent=Thaps24015;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 726218 727435 . - . ID=Thaps263558;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D4];external_name=Thaps263558;logic_name=jgi_thaps3 chr9 ensembl transcript 726218 727435 . - . ID=Thaps263558;Parent=Thaps263558;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 726218 726498 . - 0 ID=Thaps263558;Parent=Thaps263558;rank=6 chr9 . exon 726218 726498 . - . ID=Thaps263558.6;Parent=Thaps263558;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 726613 726679 . - 0 ID=Thaps263558;Parent=Thaps263558;rank=5 chr9 . exon 726613 726679 . - . ID=Thaps263558.5;Parent=Thaps263558;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 726698 726735 . - 0 ID=Thaps263558;Parent=Thaps263558;rank=4 chr9 . exon 726698 726735 . - . ID=Thaps263558.4;Parent=Thaps263558;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 726790 726886 . - 0 ID=Thaps263558;Parent=Thaps263558;rank=3 chr9 . exon 726790 726886 . - . ID=Thaps263558.3;Parent=Thaps263558;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 726926 727164 . - 0 ID=Thaps263558;Parent=Thaps263558;rank=2 chr9 . exon 726926 727164 . - . ID=Thaps263558.2;Parent=Thaps263558;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 727183 727435 . - 0 ID=Thaps263558;Parent=Thaps263558;rank=1 chr9 . exon 727183 727435 . - . ID=Thaps263558.1;Parent=Thaps263558;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . repeat_region 735525 735545 . ? . description=trf chr9 . repeat_region 739607 739626 . ? . description=trf chr9 . repeat_region 739607 739626 . ? . description=dust chr9 ensembl protein_coding_gene 735667 737160 . + . ID=Thaps24016;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D6];external_name=Thaps24016;logic_name=jgi_thaps3 chr9 ensembl transcript 735667 737160 . + . ID=Thaps24016;Parent=Thaps24016;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 735667 736561 . + 0 ID=Thaps24016;Parent=Thaps24016;rank=1 chr9 . exon 735667 736561 . + . ID=Thaps24016.1;Parent=Thaps24016;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 736658 737160 . + 0 ID=Thaps24016;Parent=Thaps24016;rank=2 chr9 . exon 736658 737160 . + . ID=Thaps24016.2;Parent=Thaps24016;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 739927 746420 . - . ID=Thaps24017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D8];external_name=Thaps24017;logic_name=jgi_thaps3 chr9 ensembl transcript 739927 746420 . - . ID=Thaps24017;Parent=Thaps24017;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 739927 740038 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=14 chr9 . exon 739927 740038 . - . ID=Thaps24017.14;Parent=Thaps24017;constitutive=1;ensembl_end_phase=1;rank=14 chr9 . CDS 740208 740547 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=13 chr9 . exon 740208 740547 . - . ID=Thaps24017.13;Parent=Thaps24017;constitutive=1;ensembl_end_phase=1;rank=13 chr9 . CDS 740645 740681 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=12 chr9 . exon 740645 740681 . - . ID=Thaps24017.12;Parent=Thaps24017;constitutive=1;ensembl_end_phase=1;rank=12 chr9 . CDS 740772 740950 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=11 chr9 . exon 740772 740950 . - . ID=Thaps24017.11;Parent=Thaps24017;constitutive=1;ensembl_end_phase=2;rank=11 chr9 . CDS 741407 741474 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=10 chr9 . exon 741407 741474 . - . ID=Thaps24017.10;Parent=Thaps24017;constitutive=1;ensembl_end_phase=2;rank=10 chr9 . CDS 741556 741639 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=9 chr9 . exon 741556 741639 . - . ID=Thaps24017.9;Parent=Thaps24017;constitutive=1;rank=9 chr9 . CDS 741727 741832 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=8 chr9 . exon 741727 741832 . - . ID=Thaps24017.8;Parent=Thaps24017;constitutive=1;ensembl_end_phase=1;rank=8 chr9 . CDS 741910 741972 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=7 chr9 . exon 741910 741972 . - . ID=Thaps24017.7;Parent=Thaps24017;constitutive=1;rank=7 chr9 . CDS 742054 742595 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=6 chr9 . exon 742054 742595 . - . ID=Thaps24017.6;Parent=Thaps24017;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 742680 742960 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=5 chr9 . exon 742680 742960 . - . ID=Thaps24017.5;Parent=Thaps24017;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 743060 743493 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=4 chr9 . exon 743060 743493 . - . ID=Thaps24017.4;Parent=Thaps24017;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 743843 744496 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=3 chr9 . exon 743843 744496 . - . ID=Thaps24017.3;Parent=Thaps24017;constitutive=1;rank=3 chr9 . CDS 744583 744796 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=2 chr9 . CDS 744870 746420 . - 0 ID=Thaps24017;Parent=Thaps24017;rank=1 chr9 ensembl protein_coding_gene 737743 738584 . - . ID=Thaps8090;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D7];external_name=Thaps8090;logic_name=jgi_thaps3 chr9 ensembl transcript 737743 738584 . - . ID=Thaps8090;Parent=Thaps8090;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 737743 738521 . - 0 ID=Thaps8090;Parent=Thaps8090;rank=2 chr9 . exon 737743 738521 . - . ID=Thaps8090.2;Parent=Thaps8090;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 738545 738584 . - 0 ID=Thaps8090;Parent=Thaps8090;rank=1 chr9 . exon 738545 738584 . - . ID=Thaps8090.1;Parent=Thaps8090;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . exon 744583 744796 . - . ID=Thaps24017.2;Parent=Thaps24017;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . exon 744870 746420 . - . ID=Thaps24017.1;Parent=Thaps24017;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 750223 754917 . + . ID=Thaps24018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8E0];external_name=Thaps24018;logic_name=jgi_thaps3 chr9 ensembl transcript 750223 754917 . + . ID=Thaps24018;Parent=Thaps24018;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 750223 752980 . + 0 ID=Thaps24018;Parent=Thaps24018;rank=1 chr9 . exon 750223 752980 . + . ID=Thaps24018.1;Parent=Thaps24018;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 753058 753246 . + 0 ID=Thaps24018;Parent=Thaps24018;rank=2 chr9 . exon 753058 753246 . + . ID=Thaps24018.2;Parent=Thaps24018;constitutive=1;rank=2 chr9 . CDS 753275 754917 . + 0 ID=Thaps24018;Parent=Thaps24018;rank=3 chr9 . exon 753275 754917 . + . ID=Thaps24018.3;Parent=Thaps24018;constitutive=1;ensembl_end_phase=2;rank=3 chr9 ensembl protein_coding_gene 747139 749592 . + . ID=Thaps8092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8D9];external_name=Thaps8092;logic_name=jgi_thaps3 chr9 ensembl transcript 747139 749592 . + . ID=Thaps8092;Parent=Thaps8092;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 747139 748768 . + 0 ID=Thaps8092;Parent=Thaps8092;rank=1 chr9 . exon 747139 748768 . + . ID=Thaps8092.1;Parent=Thaps8092;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 748870 749217 . + 0 ID=Thaps8092;Parent=Thaps8092;rank=2 chr9 . exon 748870 749217 . + . ID=Thaps8092.2;Parent=Thaps8092;constitutive=1;rank=2 chr9 . CDS 749318 749592 . + 0 ID=Thaps8092;Parent=Thaps8092;rank=3 chr9 . exon 749318 749592 . + . ID=Thaps8092.3;Parent=Thaps8092;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . repeat_region 760480 760487 . ? . description=dust chr9 . repeat_region 763503 763512 . ? . description=dust chr9 . repeat_region 763659 763668 . ? . description=dust chr9 ensembl protein_coding_gene 757941 763120 . - . ID=Thaps24019;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8E2];external_name=Thaps24019;logic_name=jgi_thaps3 chr9 ensembl transcript 757941 763120 . - . ID=Thaps24019;Parent=Thaps24019;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 757941 760312 . - 0 ID=Thaps24019;Parent=Thaps24019;rank=6 chr9 . exon 757941 760312 . - . ID=Thaps24019.6;Parent=Thaps24019;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 760514 761488 . - 0 ID=Thaps24019;Parent=Thaps24019;rank=5 chr9 . exon 760514 761488 . - . ID=Thaps24019.5;Parent=Thaps24019;constitutive=1;rank=5 chr9 . CDS 761571 761730 . - 0 ID=Thaps24019;Parent=Thaps24019;rank=4 chr9 . exon 761571 761730 . - . ID=Thaps24019.4;Parent=Thaps24019;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 761801 762223 . - 0 ID=Thaps24019;Parent=Thaps24019;rank=3 chr9 . exon 761801 762223 . - . ID=Thaps24019.3;Parent=Thaps24019;constitutive=1;rank=3 chr9 . CDS 762310 762849 . - 0 ID=Thaps24019;Parent=Thaps24019;rank=2 chr9 . exon 762310 762849 . - . ID=Thaps24019.2;Parent=Thaps24019;constitutive=1;rank=2 chr9 . CDS 762974 763120 . - 0 ID=Thaps24019;Parent=Thaps24019;rank=1 chr9 . exon 762974 763120 . - . ID=Thaps24019.1;Parent=Thaps24019;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 756306 757517 . + . ID=Thaps8094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8E1];external_name=Thaps8094;logic_name=jgi_thaps3 chr9 ensembl transcript 756306 757517 . + . ID=Thaps8094;Parent=Thaps8094;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 756306 757517 . + 0 ID=Thaps8094;Parent=Thaps8094;rank=1 chr9 . exon 756306 757517 . + . ID=Thaps8094.1;Parent=Thaps8094;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 768735 770648 . + . ID=Thaps24021;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8E5];external_name=Thaps24021;logic_name=jgi_thaps3 chr9 ensembl transcript 768735 770648 . + . ID=Thaps24021;Parent=Thaps24021;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 768735 770648 . + 0 ID=Thaps24021;Parent=Thaps24021;rank=1 chr9 . exon 768735 770648 . + . ID=Thaps24021.1;Parent=Thaps24021;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 771120 771717 . - . ID=Thaps24022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8E6];external_name=Thaps24022;logic_name=jgi_thaps3 chr9 ensembl transcript 771120 771717 . - . ID=Thaps24022;Parent=Thaps24022;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 771120 771283 . - 0 ID=Thaps24022;Parent=Thaps24022;rank=2 chr9 . exon 771120 771283 . - . ID=Thaps24022.2;Parent=Thaps24022;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 771522 771717 . - 0 ID=Thaps24022;Parent=Thaps24022;rank=1 chr9 . exon 771522 771717 . - . ID=Thaps24022.1;Parent=Thaps24022;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 772221 774332 . + . ID=Thaps24023;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8E7];external_name=Thaps24023;logic_name=jgi_thaps3 chr9 ensembl transcript 772221 774332 . + . ID=Thaps24023;Parent=Thaps24023;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 772221 772347 . + 0 ID=Thaps24023;Parent=Thaps24023;rank=1 chr9 . exon 772221 772347 . + . ID=Thaps24023.1;Parent=Thaps24023;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 772440 773138 . + 0 ID=Thaps24023;Parent=Thaps24023;rank=2 chr9 . exon 772440 773138 . + . ID=Thaps24023.2;Parent=Thaps24023;constitutive=1;rank=2 chr9 . CDS 773575 774332 . + 0 ID=Thaps24023;Parent=Thaps24023;rank=3 chr9 . exon 773575 774332 . + . ID=Thaps24023.3;Parent=Thaps24023;constitutive=1;ensembl_end_phase=2;rank=3 chr9 ensembl protein_coding_gene 764388 766378 . + . ID=Thaps269437;biotype=protein_coding;description=EF hand-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8E3];external_name=Thaps269437;logic_name=jgi_thaps3 chr9 ensembl transcript 764388 766378 . + . ID=Thaps269437;Parent=Thaps269437;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 764388 765600 . + 0 ID=Thaps269437;Parent=Thaps269437;rank=1 chr9 . exon 764388 765600 . + . ID=Thaps269437.1;Parent=Thaps269437;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 765687 766378 . + 0 ID=Thaps269437;Parent=Thaps269437;rank=2 chr9 . exon 765687 766378 . + . ID=Thaps269437.2;Parent=Thaps269437;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 766529 767920 . - . ID=Thaps8097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8E4];external_name=Thaps8097;logic_name=jgi_thaps3 chr9 ensembl transcript 766529 767920 . - . ID=Thaps8097;Parent=Thaps8097;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 766529 767920 . - 0 ID=Thaps8097;Parent=Thaps8097;rank=1 chr9 . exon 766529 767920 . - . ID=Thaps8097.1;Parent=Thaps8097;constitutive=1;rank=1 chr9 ensembl gene 774759 775048 . + . ID=EPrTPOG00000000003;biotype=MRP_RNA;description=RNase MRP [Source:RFAM%3BAcc:RF00030];external_name=RNase_MRP;logic_name=ncrna_eg chr9 ensembl transcript 774759 775048 . + . ID=EPrTPOT00000000035;Parent=EPrTPOG00000000003;biotype=MRP_RNA;logic_name=ncrna_eg chr9 . exon 774759 775048 . + . ID=EPrTPOE00000000003;Parent=EPrTPOT00000000035;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 780825 782349 . - . ID=Thaps14890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8F0];external_name=Thaps14890;logic_name=jgi_thaps3 chr9 ensembl transcript 780825 782349 . - . ID=Thaps14890;Parent=Thaps14890;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 780825 781194 . - 0 ID=Thaps14890;Parent=Thaps14890;rank=3 chr9 . exon 780825 781194 . - . ID=Thaps14890.3;Parent=Thaps14890;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 781463 782040 . - 0 ID=Thaps14890;Parent=Thaps14890;rank=2 chr9 . exon 781463 782040 . - . ID=Thaps14890.2;Parent=Thaps14890;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 782161 782349 . - 0 ID=Thaps14890;Parent=Thaps14890;rank=1 chr9 . exon 782161 782349 . - . ID=Thaps14890.1;Parent=Thaps14890;constitutive=1;rank=1 chr9 ensembl gene 782914 785204 . + . ID=Thaps24025;biotype=nontranslating_CDS;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8F1];external_name=Thaps24712;logic_name=jgi_thaps3 chr9 ensembl transcript 782914 785204 . + . ID=Thaps24025;Parent=Thaps24025;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr9 . exon 782914 783011 . + . ID=Thaps24025.1;Parent=Thaps24025;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . exon 783268 783643 . + . ID=Thaps24025.2;Parent=Thaps24025;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . exon 783882 785069 . + . ID=Thaps24025.3;Parent=Thaps24025;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 778948 780343 . + . ID=Thaps263562;biotype=protein_coding;description=Glutathione s-transferase [Source:UniProtKB/TrEMBL%3BAcc:B8C8E9];external_name=Thaps263562;logic_name=jgi_thaps3 chr9 ensembl transcript 778948 780343 . + . ID=Thaps263562;Parent=Thaps263562;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 778948 779212 . + 0 ID=Thaps263562;Parent=Thaps263562;rank=1 chr9 . exon 778948 779212 . + . ID=Thaps263562.1;Parent=Thaps263562;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 779435 780343 . + 0 ID=Thaps263562;Parent=Thaps263562;rank=2 chr9 . exon 779435 780343 . + . ID=Thaps263562.2;Parent=Thaps263562;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 775312 777305 . + . ID=Thaps8101;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8E8];external_name=Thaps8101;logic_name=jgi_thaps3 chr9 ensembl transcript 775312 777305 . + . ID=Thaps8101;Parent=Thaps8101;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 775312 776448 . + 0 ID=Thaps8101;Parent=Thaps8101;rank=1 chr9 . exon 775312 776448 . + . ID=Thaps8101.1;Parent=Thaps8101;constitutive=1;rank=1 chr9 . CDS 776535 777305 . + 0 ID=Thaps8101;Parent=Thaps8101;rank=2 chr9 . exon 776535 777305 . + . ID=Thaps8101.2;Parent=Thaps8101;constitutive=1;rank=2 chr9 . repeat_region 787613 787621 . ? . description=dust chr9 . repeat_region 790373 790402 . ? . description=trf chr9 . exon 785204 785204 . + . ID=Thaps24025.4;Parent=Thaps24025;constitutive=1;ensembl_end_phase=1;rank=4 chr9 ensembl protein_coding_gene 790637 791731 . - . ID=Thaps24026;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8F3];external_name=Thaps24026;logic_name=jgi_thaps3 chr9 ensembl transcript 790637 791731 . - . ID=Thaps24026;Parent=Thaps24026;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 790637 791731 . - 0 ID=Thaps24026;Parent=Thaps24026;rank=1 chr9 . exon 790637 791731 . - . ID=Thaps24026.1;Parent=Thaps24026;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 792289 794133 . - . ID=Thaps269439;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8F4];external_name=Thaps269439;logic_name=jgi_thaps3 chr9 ensembl transcript 792289 794133 . - . ID=Thaps269439;Parent=Thaps269439;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 792289 792432 . - 0 ID=Thaps269439;Parent=Thaps269439;rank=5 chr9 . exon 792289 792432 . - . ID=Thaps269439.5;Parent=Thaps269439;constitutive=1;rank=5 chr9 . CDS 792642 792772 . - 0 ID=Thaps269439;Parent=Thaps269439;rank=4 chr9 . exon 792642 792772 . - . ID=Thaps269439.4;Parent=Thaps269439;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 792838 793222 . - 0 ID=Thaps269439;Parent=Thaps269439;rank=3 chr9 . exon 792838 793222 . - . ID=Thaps269439.3;Parent=Thaps269439;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 793340 793437 . - 0 ID=Thaps269439;Parent=Thaps269439;rank=2 chr9 . exon 793340 793437 . - . ID=Thaps269439.2;Parent=Thaps269439;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 793551 794133 . - 0 ID=Thaps269439;Parent=Thaps269439;rank=1 chr9 . exon 793551 794133 . - . ID=Thaps269439.1;Parent=Thaps269439;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 788272 789864 . + . ID=Thaps8106;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8F2];external_name=Thaps8106;logic_name=jgi_thaps3 chr9 ensembl transcript 788272 789864 . + . ID=Thaps8106;Parent=Thaps8106;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 788272 789864 . + 0 ID=Thaps8106;Parent=Thaps8106;rank=1 chr9 . exon 788272 789864 . + . ID=Thaps8106.1;Parent=Thaps8106;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 800122 801643 . - . ID=Thaps24028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8F6];external_name=Thaps24028;logic_name=jgi_thaps3 chr9 ensembl transcript 800122 801643 . - . ID=Thaps24028;Parent=Thaps24028;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 800122 800798 . - 0 ID=Thaps24028;Parent=Thaps24028;rank=2 chr9 . exon 800122 800798 . - . ID=Thaps24028.2;Parent=Thaps24028;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 800899 801643 . - 0 ID=Thaps24028;Parent=Thaps24028;rank=1 chr9 . exon 800899 801643 . - . ID=Thaps24028.1;Parent=Thaps24028;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 798305 799165 . + . ID=Thaps36246;biotype=protein_coding;description=Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8C8F5];external_name=Thaps36246;logic_name=jgi_thaps3 chr9 ensembl transcript 798305 799165 . + . ID=Thaps36246;Parent=Thaps36246;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 798305 798832 . + 0 ID=Thaps36246;Parent=Thaps36246;rank=1 chr9 . exon 798305 798832 . + . ID=Thaps36246.1;Parent=Thaps36246;constitutive=1;rank=1 chr9 . CDS 798875 799165 . + 0 ID=Thaps36246;Parent=Thaps36246;rank=2 chr9 . exon 798875 799165 . + . ID=Thaps36246.2;Parent=Thaps36246;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 802202 802687 . + . ID=Thaps8110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8F7];external_name=Thaps8110;logic_name=jgi_thaps3 chr9 ensembl transcript 802202 802687 . + . ID=Thaps8110;Parent=Thaps8110;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 802202 802318 . + 0 ID=Thaps8110;Parent=Thaps8110;rank=1 chr9 . exon 802202 802318 . + . ID=Thaps8110.1;Parent=Thaps8110;constitutive=1;rank=1 chr9 . CDS 802484 802687 . + 0 ID=Thaps8110;Parent=Thaps8110;rank=2 chr9 . exon 802484 802687 . + . ID=Thaps8110.2;Parent=Thaps8110;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 802973 804162 . - . ID=Thaps8111;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8F8];external_name=Thaps8111;logic_name=jgi_thaps3 chr9 ensembl transcript 802973 804162 . - . ID=Thaps8111;Parent=Thaps8111;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 802973 803484 . - 0 ID=Thaps8111;Parent=Thaps8111;rank=2 chr9 . exon 802973 803484 . - . ID=Thaps8111.2;Parent=Thaps8111;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 803607 804162 . - 0 ID=Thaps8111;Parent=Thaps8111;rank=1 chr9 . exon 803607 804162 . - . ID=Thaps8111.1;Parent=Thaps8111;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . repeat_region 812944 813054 . ? . description=trf chr9 ensembl tRNA_gene 813661 813733 . + . ID=EPrTPOG00000000089;biotype=tRNA;description=tRNA-Trp for anticodon CCA [Source:TRNASCAN_SE%3BAcc:tRNA-Trp];external_name=tRNA-Trp;logic_name=ncrna_eg chr9 ensembl transcript 813661 813733 . + . ID=EPrTPOT00000000089;Parent=EPrTPOG00000000089;biotype=tRNA;logic_name=ncrna_eg chr9 . exon 813661 813733 . + . ID=EPrTPOE00000000089;Parent=EPrTPOT00000000089;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 804701 806896 . + . ID=Thaps24029;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8F9];external_name=Thaps24029;logic_name=jgi_thaps3 chr9 ensembl transcript 804701 806896 . + . ID=Thaps24029;Parent=Thaps24029;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 804701 806896 . + 0 ID=Thaps24029;Parent=Thaps24029;rank=1 chr9 . exon 804701 806896 . + . ID=Thaps24029.1;Parent=Thaps24029;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 807023 808429 . - . ID=Thaps24030;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8G0];external_name=Thaps24030;logic_name=jgi_thaps3 chr9 ensembl transcript 807023 808429 . - . ID=Thaps24030;Parent=Thaps24030;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 807023 808429 . - 0 ID=Thaps24030;Parent=Thaps24030;rank=1 chr9 . exon 807023 808429 . - . ID=Thaps24030.1;Parent=Thaps24030;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 808754 809894 . + . ID=Thaps24031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8G1];external_name=Thaps24031;logic_name=jgi_thaps3 chr9 ensembl transcript 808754 809894 . + . ID=Thaps24031;Parent=Thaps24031;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 808754 808969 . + 0 ID=Thaps24031;Parent=Thaps24031;rank=1 chr9 . exon 808754 808969 . + . ID=Thaps24031.1;Parent=Thaps24031;constitutive=1;rank=1 chr9 . CDS 809069 809182 . + 0 ID=Thaps24031;Parent=Thaps24031;rank=2 chr9 . exon 809069 809182 . + . ID=Thaps24031.2;Parent=Thaps24031;constitutive=1;rank=2 chr9 . CDS 809355 809894 . + 0 ID=Thaps24031;Parent=Thaps24031;rank=3 chr9 . exon 809355 809894 . + . ID=Thaps24031.3;Parent=Thaps24031;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 811224 811513 . + . ID=Thaps263565;biotype=protein_coding;description=Small RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8C8G2];external_name=Thaps263565;logic_name=jgi_thaps3 chr9 ensembl transcript 811224 811513 . + . ID=Thaps263565;Parent=Thaps263565;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 811224 811379 . + 0 ID=Thaps263565;Parent=Thaps263565;rank=1 chr9 . exon 811224 811379 . + . ID=Thaps263565.1;Parent=Thaps263565;constitutive=1;rank=1 chr9 . CDS 811419 811513 . + 0 ID=Thaps263565;Parent=Thaps263565;rank=2 chr9 . exon 811419 811513 . + . ID=Thaps263565.2;Parent=Thaps263565;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 811682 812902 . - . ID=Thaps263566;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8G3];external_name=Thaps263566;logic_name=jgi_thaps3 chr9 ensembl transcript 811682 812902 . - . ID=Thaps263566;Parent=Thaps263566;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 811682 812902 . - 0 ID=Thaps263566;Parent=Thaps263566;rank=1 chr9 . exon 811682 812902 . - . ID=Thaps263566.1;Parent=Thaps263566;constitutive=1;rank=1 chr9 . repeat_region 820519 820526 . ? . description=dust chr9 . repeat_region 823566 823588 . ? . description=dust chr9 ensembl protein_coding_gene 815568 816617 . - . ID=Thaps16511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8G4];external_name=Thaps16511;logic_name=jgi_thaps3 chr9 ensembl transcript 815568 816617 . - . ID=Thaps16511;Parent=Thaps16511;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 815568 816000 . - 0 ID=Thaps16511;Parent=Thaps16511;rank=3 chr9 . exon 815568 816000 . - . ID=Thaps16511.3;Parent=Thaps16511;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 816094 816385 . - 0 ID=Thaps16511;Parent=Thaps16511;rank=2 chr9 . exon 816094 816385 . - . ID=Thaps16511.2;Parent=Thaps16511;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 816482 816617 . - 0 ID=Thaps16511;Parent=Thaps16511;rank=1 chr9 . exon 816482 816617 . - . ID=Thaps16511.1;Parent=Thaps16511;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 821726 822025 . + . ID=Thaps36186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8G7];external_name=Thaps36186;logic_name=jgi_thaps3 chr9 ensembl transcript 821726 822025 . + . ID=Thaps36186;Parent=Thaps36186;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 821726 822025 . + 0 ID=Thaps36186;Parent=Thaps36186;rank=1 chr9 . exon 821726 822025 . + . ID=Thaps36186.1;Parent=Thaps36186;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 817329 819420 . + . ID=Thaps41733;biotype=protein_coding;description=Thiamin biosynthesis protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8G5];external_name=THI1;logic_name=jgi_thaps3 chr9 ensembl transcript 817329 819420 . + . ID=Thaps41733;Parent=Thaps41733;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 817329 818277 . + 0 ID=Thaps41733;Parent=Thaps41733;rank=1 chr9 . exon 817329 818277 . + . ID=Thaps41733.1;Parent=Thaps41733;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 818361 818779 . + 0 ID=Thaps41733;Parent=Thaps41733;rank=2 chr9 . exon 818361 818779 . + . ID=Thaps41733.2;Parent=Thaps41733;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 818878 819420 . + 0 ID=Thaps41733;Parent=Thaps41733;rank=3 chr9 . exon 818878 819420 . + . ID=Thaps41733.3;Parent=Thaps41733;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 819975 821009 . - . ID=Thaps8119;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8G6];external_name=Thaps8119;logic_name=jgi_thaps3 chr9 ensembl transcript 819975 821009 . - . ID=Thaps8119;Parent=Thaps8119;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 819975 821009 . - 0 ID=Thaps8119;Parent=Thaps8119;rank=1 chr9 . exon 819975 821009 . - . ID=Thaps8119.1;Parent=Thaps8119;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 822327 823239 . - . ID=Thaps8121;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8G8];external_name=Thaps8121;logic_name=jgi_thaps3 chr9 ensembl transcript 822327 823239 . - . ID=Thaps8121;Parent=Thaps8121;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 822327 822978 . - 0 ID=Thaps8121;Parent=Thaps8121;rank=2 chr9 . exon 822327 822978 . - . ID=Thaps8121.2;Parent=Thaps8121;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 823100 823239 . - 0 ID=Thaps8121;Parent=Thaps8121;rank=1 chr9 . exon 823100 823239 . - . ID=Thaps8121.1;Parent=Thaps8121;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 823402 824052 . + . ID=Thaps8122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8G9];external_name=Thaps8122;logic_name=jgi_thaps3 chr9 ensembl transcript 823402 824052 . + . ID=Thaps8122;Parent=Thaps8122;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 823402 824052 . + 0 ID=Thaps8122;Parent=Thaps8122;rank=1 chr9 . exon 823402 824052 . + . ID=Thaps8122.1;Parent=Thaps8122;constitutive=1;rank=1 chr9 . repeat_region 824371 824402 . ? . description=trf chr9 . repeat_region 827922 827960 . ? . description=trf chr9 . repeat_region 829007 829032 . ? . description=trf chr9 . biological_region 830884 830885 0.999 - . logic_name=eponine chr9 ensembl protein_coding_gene 824361 825264 . - . ID=Thaps24034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H0];external_name=Thaps24034;logic_name=jgi_thaps3 chr9 ensembl transcript 824361 825264 . - . ID=Thaps24034;Parent=Thaps24034;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 824361 824404 . - 0 ID=Thaps24034;Parent=Thaps24034;rank=4 chr9 . exon 824361 824404 . - . ID=Thaps24034.4;Parent=Thaps24034;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 824477 824839 . - 0 ID=Thaps24034;Parent=Thaps24034;rank=3 chr9 . exon 824477 824839 . - . ID=Thaps24034.3;Parent=Thaps24034;constitutive=1;rank=3 chr9 . CDS 824935 825119 . - 0 ID=Thaps24034;Parent=Thaps24034;rank=2 chr9 . exon 824935 825119 . - . ID=Thaps24034.2;Parent=Thaps24034;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 825191 825264 . - 0 ID=Thaps24034;Parent=Thaps24034;rank=1 chr9 . exon 825191 825264 . - . ID=Thaps24034.1;Parent=Thaps24034;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 826137 836376 . - . ID=Thaps24035;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H1];external_name=Thaps24035;logic_name=jgi_thaps3 chr9 ensembl transcript 826137 836376 . - . ID=Thaps24035;Parent=Thaps24035;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 826137 826354 . - 0 ID=Thaps24035;Parent=Thaps24035;rank=7 chr9 . exon 826137 826354 . - . ID=Thaps24035.7;Parent=Thaps24035;constitutive=1;ensembl_end_phase=2;rank=7 chr9 . CDS 826446 827016 . - 0 ID=Thaps24035;Parent=Thaps24035;rank=6 chr9 . exon 826446 827016 . - . ID=Thaps24035.6;Parent=Thaps24035;constitutive=1;ensembl_end_phase=1;rank=6 chr9 . CDS 827099 827467 . - 0 ID=Thaps24035;Parent=Thaps24035;rank=5 chr9 . exon 827099 827467 . - . ID=Thaps24035.5;Parent=Thaps24035;constitutive=1;rank=5 chr9 . CDS 827541 829763 . - 0 ID=Thaps24035;Parent=Thaps24035;rank=4 chr9 . exon 827541 829763 . - . ID=Thaps24035.4;Parent=Thaps24035;constitutive=1;rank=4 chr9 . CDS 829849 833367 . - 0 ID=Thaps24035;Parent=Thaps24035;rank=3 chr9 . exon 829849 833367 . - . ID=Thaps24035.3;Parent=Thaps24035;constitutive=1;rank=3 chr9 . CDS 833449 835688 . - 0 ID=Thaps24035;Parent=Thaps24035;rank=2 chr9 . exon 833449 835688 . - . ID=Thaps24035.2;Parent=Thaps24035;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 835851 836376 . - 0 ID=Thaps24035;Parent=Thaps24035;rank=1 chr9 . repeat_region 840240 840278 . ? . description=dust chr9 . exon 835851 836376 . - . ID=Thaps24035.1;Parent=Thaps24035;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 837648 840191 . - . ID=Thaps24037;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H2];external_name=Thaps24037;logic_name=jgi_thaps3 chr9 ensembl transcript 837648 840191 . - . ID=Thaps24037;Parent=Thaps24037;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 837648 839363 . - 0 ID=Thaps24037;Parent=Thaps24037;rank=6 chr9 . exon 837648 839363 . - . ID=Thaps24037.6;Parent=Thaps24037;constitutive=1;rank=6 chr9 . CDS 839600 839650 . - 0 ID=Thaps24037;Parent=Thaps24037;rank=5 chr9 . exon 839600 839650 . - . ID=Thaps24037.5;Parent=Thaps24037;constitutive=1;rank=5 chr9 . CDS 839733 839747 . - 0 ID=Thaps24037;Parent=Thaps24037;rank=4 chr9 . exon 839733 839747 . - . ID=Thaps24037.4;Parent=Thaps24037;constitutive=1;rank=4 chr9 . CDS 839833 839850 . - 0 ID=Thaps24037;Parent=Thaps24037;rank=3 chr9 . exon 839833 839850 . - . ID=Thaps24037.3;Parent=Thaps24037;constitutive=1;rank=3 chr9 . CDS 840045 840065 . - 0 ID=Thaps24037;Parent=Thaps24037;rank=2 chr9 . exon 840045 840065 . - . ID=Thaps24037.2;Parent=Thaps24037;constitutive=1;rank=2 chr9 . CDS 840150 840191 . - 0 ID=Thaps24037;Parent=Thaps24037;rank=1 chr9 . exon 840150 840191 . - . ID=Thaps24037.1;Parent=Thaps24037;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 842697 844268 . + . ID=Thaps24038;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H4];external_name=Thaps24038;logic_name=jgi_thaps3 chr9 ensembl transcript 842697 844268 . + . ID=Thaps24038;Parent=Thaps24038;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 842697 844268 . + 0 ID=Thaps24038;Parent=Thaps24038;rank=1 chr9 . exon 842697 844268 . + . ID=Thaps24038.1;Parent=Thaps24038;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 840377 842291 . - . ID=Thaps649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H3];external_name=Thaps649;logic_name=jgi_thaps3 chr9 ensembl transcript 840377 842291 . - . ID=Thaps649;Parent=Thaps649;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 840377 840621 . - 0 ID=Thaps649;Parent=Thaps649;rank=3 chr9 . exon 840377 840621 . - . ID=Thaps649.3;Parent=Thaps649;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 840710 841559 . - 0 ID=Thaps649;Parent=Thaps649;rank=2 chr9 . exon 840710 841559 . - . ID=Thaps649.2;Parent=Thaps649;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 842289 842291 . - 0 ID=Thaps649;Parent=Thaps649;rank=1 chr9 . exon 842289 842291 . - . ID=Thaps649.1;Parent=Thaps649;constitutive=1;rank=1 chr9 . repeat_region 847228 847247 . ? . description=trf chr9 . repeat_region 852137 852160 . ? . description=trf chr9 . biological_region 852550 852550 0.999 - . logic_name=eponine chr9 ensembl protein_coding_gene 850688 851830 . - . ID=Thaps24039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H7];external_name=Thaps24039;logic_name=jgi_thaps3 chr9 ensembl transcript 850688 851830 . - . ID=Thaps24039;Parent=Thaps24039;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 850688 851830 . - 0 ID=Thaps24039;Parent=Thaps24039;rank=1 chr9 . exon 850688 851830 . - . ID=Thaps24039.1;Parent=Thaps24039;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 852415 854496 . + . ID=Thaps269446;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H8];external_name=Thaps269446;logic_name=jgi_thaps3 chr9 ensembl transcript 852415 854496 . + . ID=Thaps269446;Parent=Thaps269446;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 852415 852846 . + 0 ID=Thaps269446;Parent=Thaps269446;rank=1 chr9 . exon 852415 852846 . + . ID=Thaps269446.1;Parent=Thaps269446;constitutive=1;rank=1 chr9 . CDS 852901 853107 . + 0 ID=Thaps269446;Parent=Thaps269446;rank=2 chr9 . exon 852901 853107 . + . ID=Thaps269446.2;Parent=Thaps269446;constitutive=1;rank=2 chr9 . CDS 853144 854285 . + 0 ID=Thaps269446;Parent=Thaps269446;rank=3 chr9 . exon 853144 854285 . + . ID=Thaps269446.3;Parent=Thaps269446;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 854359 854372 . + 0 ID=Thaps269446;Parent=Thaps269446;rank=4 chr9 . CDS 854477 854496 . + 0 ID=Thaps269446;Parent=Thaps269446;rank=5 chr9 ensembl protein_coding_gene 845239 847413 . - . ID=Thaps8129;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H5];external_name=Thaps8129;logic_name=jgi_thaps3 chr9 ensembl transcript 845239 847413 . - . ID=Thaps8129;Parent=Thaps8129;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 845239 846234 . - 0 ID=Thaps8129;Parent=Thaps8129;rank=3 chr9 . exon 845239 846234 . - . ID=Thaps8129.3;Parent=Thaps8129;constitutive=1;rank=3 chr9 . CDS 846327 847376 . - 0 ID=Thaps8129;Parent=Thaps8129;rank=2 chr9 . exon 846327 847376 . - . ID=Thaps8129.2;Parent=Thaps8129;constitutive=1;rank=2 chr9 . CDS 847399 847413 . - 0 ID=Thaps8129;Parent=Thaps8129;rank=1 chr9 . exon 847399 847413 . - . ID=Thaps8129.1;Parent=Thaps8129;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 847665 850433 . + . ID=Thaps8130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H6];external_name=Thaps8130;logic_name=jgi_thaps3 chr9 ensembl transcript 847665 850433 . + . ID=Thaps8130;Parent=Thaps8130;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 847665 850433 . + 0 ID=Thaps8130;Parent=Thaps8130;rank=1 chr9 . exon 847665 850433 . + . ID=Thaps8130.1;Parent=Thaps8130;constitutive=1;rank=1 chr9 . repeat_region 863557 863700 . + . description=Copia9LTR_TP chr9 ensembl protein_coding_gene 858001 860955 . + . ID=Thaps24042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8I0];external_name=Thaps24042;logic_name=jgi_thaps3 chr9 ensembl transcript 858001 860955 . + . ID=Thaps24042;Parent=Thaps24042;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 858001 858112 . + 0 ID=Thaps24042;Parent=Thaps24042;rank=1 chr9 . exon 858001 858112 . + . ID=Thaps24042.1;Parent=Thaps24042;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 858261 858808 . + 0 ID=Thaps24042;Parent=Thaps24042;rank=2 chr9 . exon 858261 858808 . + . ID=Thaps24042.2;Parent=Thaps24042;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 858917 859101 . + 0 ID=Thaps24042;Parent=Thaps24042;rank=3 chr9 . exon 858917 859101 . + . ID=Thaps24042.3;Parent=Thaps24042;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 859178 859421 . + 0 ID=Thaps24042;Parent=Thaps24042;rank=4 chr9 . exon 859178 859421 . + . ID=Thaps24042.4;Parent=Thaps24042;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 859502 859634 . + 0 ID=Thaps24042;Parent=Thaps24042;rank=5 chr9 . exon 859502 859634 . + . ID=Thaps24042.5;Parent=Thaps24042;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 859705 859843 . + 0 ID=Thaps24042;Parent=Thaps24042;rank=6 chr9 . exon 859705 859843 . + . ID=Thaps24042.6;Parent=Thaps24042;constitutive=1;ensembl_end_phase=1;rank=6 chr9 . CDS 859914 860244 . + 0 ID=Thaps24042;Parent=Thaps24042;rank=7 chr9 . exon 859914 860244 . + . ID=Thaps24042.7;Parent=Thaps24042;constitutive=1;ensembl_end_phase=1;rank=7 chr9 . CDS 860314 860955 . + 0 ID=Thaps24042;Parent=Thaps24042;rank=8 chr9 . exon 860314 860955 . + . ID=Thaps24042.8;Parent=Thaps24042;constitutive=1;rank=8 chr9 . exon 854359 854372 . + . ID=Thaps269446.4;Parent=Thaps269446;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . exon 854477 854496 . + . ID=Thaps269446.5;Parent=Thaps269446;constitutive=1;ensembl_end_phase=2;rank=5 chr9 ensembl protein_coding_gene 855079 857716 . - . ID=Thaps8134;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8H9];external_name=Thaps8134;logic_name=jgi_thaps3 chr9 ensembl transcript 855079 857716 . - . ID=Thaps8134;Parent=Thaps8134;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 855079 855416 . - 0 ID=Thaps8134;Parent=Thaps8134;rank=4 chr9 . exon 855079 855416 . - . ID=Thaps8134.4;Parent=Thaps8134;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 855484 855905 . - 0 ID=Thaps8134;Parent=Thaps8134;rank=3 chr9 . exon 855484 855905 . - . ID=Thaps8134.3;Parent=Thaps8134;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 855980 857161 . - 0 ID=Thaps8134;Parent=Thaps8134;rank=2 chr9 . exon 855980 857161 . - . ID=Thaps8134.2;Parent=Thaps8134;constitutive=1;rank=2 chr9 . CDS 857190 857716 . - 0 ID=Thaps8134;Parent=Thaps8134;rank=1 chr9 . exon 857190 857716 . - . ID=Thaps8134.1;Parent=Thaps8134;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 861119 862303 . - . ID=Thaps8136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8I1];external_name=Thaps8136;logic_name=jgi_thaps3 chr9 ensembl transcript 861119 862303 . - . ID=Thaps8136;Parent=Thaps8136;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 861119 862303 . - 0 ID=Thaps8136;Parent=Thaps8136;rank=1 chr9 . exon 861119 862303 . - . ID=Thaps8136.1;Parent=Thaps8136;constitutive=1;rank=1 chr9 . repeat_region 863702 863980 . + . description=Copia9I_TP chr9 . repeat_region 864520 864529 . ? . description=dust chr9 . repeat_region 865819 869521 . + . description=Harbinger1_TP chr9 . repeat_region 867756 867837 . ? . description=trf chr9 . repeat_region 869396 869403 . ? . description=dust chr9 . repeat_region 869455 869462 . ? . description=dust chr9 . repeat_region 869771 869780 . ? . description=dust chr9 ensembl protein_coding_gene 871880 873424 . - . ID=Thaps269448;biotype=protein_coding;description=Mate efflux protein%2C multi antimicrobial extrusion family [Source:UniProtKB/TrEMBL%3BAcc:B8C8I4];external_name=Thaps269448;logic_name=jgi_thaps3 chr9 ensembl transcript 871880 873424 . - . ID=Thaps269448;Parent=Thaps269448;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 871880 873424 . - 0 ID=Thaps269448;Parent=Thaps269448;rank=1 chr9 . exon 871880 873424 . - . ID=Thaps269448.1;Parent=Thaps269448;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 865379 865729 . - . ID=Thaps8137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8I2];external_name=Thaps8137;logic_name=jgi_thaps3 chr9 ensembl transcript 865379 865729 . - . ID=Thaps8137;Parent=Thaps8137;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 865379 865729 . - 0 ID=Thaps8137;Parent=Thaps8137;rank=1 chr9 . exon 865379 865729 . - . ID=Thaps8137.1;Parent=Thaps8137;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 870125 870892 . + . ID=Thaps8138;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8I3];external_name=Thaps8138;logic_name=jgi_thaps3 chr9 ensembl transcript 870125 870892 . + . ID=Thaps8138;Parent=Thaps8138;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 870125 870892 . + 0 ID=Thaps8138;Parent=Thaps8138;rank=1 chr9 . exon 870125 870892 . + . ID=Thaps8138.1;Parent=Thaps8138;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 876619 877767 . - . ID=Thaps24044;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8I6];external_name=Thaps24044;logic_name=jgi_thaps3 chr9 ensembl transcript 876619 877767 . - . ID=Thaps24044;Parent=Thaps24044;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 876619 877767 . - 0 ID=Thaps24044;Parent=Thaps24044;rank=1 chr9 . exon 876619 877767 . - . ID=Thaps24044.1;Parent=Thaps24044;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 879546 880826 . + . ID=Thaps269449;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8I7];external_name=Thaps269449;logic_name=jgi_thaps3 chr9 ensembl transcript 879546 880826 . + . ID=Thaps269449;Parent=Thaps269449;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 879546 880826 . + 0 ID=Thaps269449;Parent=Thaps269449;rank=1 chr9 . exon 879546 880826 . + . ID=Thaps269449.1;Parent=Thaps269449;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 874182 876561 . + . ID=Thaps8140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8I5];external_name=Thaps8140;logic_name=jgi_thaps3 chr9 ensembl transcript 874182 876561 . + . ID=Thaps8140;Parent=Thaps8140;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 874182 874987 . + 0 ID=Thaps8140;Parent=Thaps8140;rank=1 chr9 . exon 874182 874987 . + . ID=Thaps8140.1;Parent=Thaps8140;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 875072 876253 . + 0 ID=Thaps8140;Parent=Thaps8140;rank=2 chr9 . exon 875072 876253 . + . ID=Thaps8140.2;Parent=Thaps8140;constitutive=1;rank=2 chr9 . CDS 876330 876561 . + 0 ID=Thaps8140;Parent=Thaps8140;rank=3 chr9 . exon 876330 876561 . + . ID=Thaps8140.3;Parent=Thaps8140;constitutive=1;ensembl_end_phase=1;rank=3 chr9 ensembl protein_coding_gene 881121 881492 . - . ID=Thaps8143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8I8];external_name=Thaps8143;logic_name=jgi_thaps3 chr9 ensembl transcript 881121 881492 . - . ID=Thaps8143;Parent=Thaps8143;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 881121 881492 . - 0 ID=Thaps8143;Parent=Thaps8143;rank=1 chr9 . exon 881121 881492 . - . ID=Thaps8143.1;Parent=Thaps8143;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 883179 885667 . - . ID=Thaps8144;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8I9];external_name=Thaps8144;logic_name=jgi_thaps3 chr9 ensembl transcript 883179 885667 . - . ID=Thaps8144;Parent=Thaps8144;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 883179 884831 . - 0 ID=Thaps8144;Parent=Thaps8144;rank=2 chr9 . exon 883179 884831 . - . ID=Thaps8144.2;Parent=Thaps8144;constitutive=1;rank=2 chr9 . CDS 885158 885667 . - 0 ID=Thaps8144;Parent=Thaps8144;rank=1 chr9 . repeat_region 884914 884921 . ? . description=dust chr9 . repeat_region 885561 885579 . ? . description=dust chr9 . repeat_region 891556 891615 . ? . description=dust chr9 ensembl protein_coding_gene 890838 891524 . - . ID=Thaps24046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8J1];external_name=Thaps24046;logic_name=jgi_thaps3 chr9 ensembl transcript 890838 891524 . - . ID=Thaps24046;Parent=Thaps24046;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 890838 891524 . - 0 ID=Thaps24046;Parent=Thaps24046;rank=1 chr9 . exon 890838 891524 . - . ID=Thaps24046.1;Parent=Thaps24046;constitutive=1;rank=1 chr9 . exon 885158 885667 . - . ID=Thaps8144.1;Parent=Thaps8144;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 886054 890558 . + . ID=Thaps8145;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8J0];external_name=Thaps8145;logic_name=jgi_thaps3 chr9 ensembl transcript 886054 890558 . + . ID=Thaps8145;Parent=Thaps8145;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 886054 886077 . + 0 ID=Thaps8145;Parent=Thaps8145;rank=1 chr9 . exon 886054 886077 . + . ID=Thaps8145.1;Parent=Thaps8145;constitutive=1;rank=1 chr9 . CDS 886208 889192 . + 0 ID=Thaps8145;Parent=Thaps8145;rank=2 chr9 . exon 886208 889192 . + . ID=Thaps8145.2;Parent=Thaps8145;constitutive=1;rank=2 chr9 . CDS 889269 889516 . + 0 ID=Thaps8145;Parent=Thaps8145;rank=3 chr9 . exon 889269 889516 . + . ID=Thaps8145.3;Parent=Thaps8145;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 889589 890558 . + 0 ID=Thaps8145;Parent=Thaps8145;rank=4 chr9 . exon 889589 890558 . + . ID=Thaps8145.4;Parent=Thaps8145;constitutive=1;ensembl_end_phase=1;rank=4 chr9 ensembl protein_coding_gene 892218 895589 . + . ID=Thaps8147;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8J2];external_name=Thaps8147;logic_name=jgi_thaps3 chr9 ensembl transcript 892218 895589 . + . ID=Thaps8147;Parent=Thaps8147;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 892218 893395 . + 0 ID=Thaps8147;Parent=Thaps8147;rank=1 chr9 . exon 892218 893395 . + . ID=Thaps8147.1;Parent=Thaps8147;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 893559 894123 . + 0 ID=Thaps8147;Parent=Thaps8147;rank=2 chr9 . CDS 894202 894852 . + 0 ID=Thaps8147;Parent=Thaps8147;rank=3 chr9 . CDS 894936 895113 . + 0 ID=Thaps8147;Parent=Thaps8147;rank=4 chr9 . CDS 895199 895526 . + 0 ID=Thaps8147;Parent=Thaps8147;rank=5 chr9 . CDS 895556 895589 . + 0 ID=Thaps8147;Parent=Thaps8147;rank=6 chr9 ensembl protein_coding_gene 902810 904819 . + . ID=Thaps269450;biotype=protein_coding;description=DEAD/DEAH box RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C8J5];external_name=Thaps269450;logic_name=jgi_thaps3 chr9 ensembl transcript 902810 904819 . + . ID=Thaps269450;Parent=Thaps269450;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 902810 903782 . + 0 ID=Thaps269450;Parent=Thaps269450;rank=1 chr9 . exon 902810 903782 . + . ID=Thaps269450.1;Parent=Thaps269450;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 903801 904819 . + 0 ID=Thaps269450;Parent=Thaps269450;rank=2 chr9 . exon 893559 894123 . + . ID=Thaps8147.2;Parent=Thaps8147;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . exon 894202 894852 . + . ID=Thaps8147.3;Parent=Thaps8147;constitutive=1;rank=3 chr9 . exon 894936 895113 . + . ID=Thaps8147.4;Parent=Thaps8147;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . exon 895199 895526 . + . ID=Thaps8147.5;Parent=Thaps8147;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . exon 895556 895589 . + . ID=Thaps8147.6;Parent=Thaps8147;constitutive=1;ensembl_end_phase=1;rank=6 chr9 ensembl protein_coding_gene 895659 896726 . - . ID=Thaps8148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8J3];external_name=Thaps8148;logic_name=jgi_thaps3 chr9 ensembl transcript 895659 896726 . - . ID=Thaps8148;Parent=Thaps8148;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 895659 896726 . - 0 ID=Thaps8148;Parent=Thaps8148;rank=1 chr9 . exon 895659 896726 . - . ID=Thaps8148.1;Parent=Thaps8148;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 896946 897734 . - . ID=Thaps8149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8J4];external_name=Thaps8149;logic_name=jgi_thaps3 chr9 ensembl transcript 896946 897734 . - . ID=Thaps8149;Parent=Thaps8149;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 896946 897734 . - 0 ID=Thaps8149;Parent=Thaps8149;rank=1 chr9 . exon 896946 897734 . - . ID=Thaps8149.1;Parent=Thaps8149;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 905537 907622 . + . ID=Thaps24049;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8J6];external_name=Thaps24049;logic_name=jgi_thaps3 chr9 ensembl transcript 905537 907622 . + . ID=Thaps24049;Parent=Thaps24049;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 905537 906361 . + 0 ID=Thaps24049;Parent=Thaps24049;rank=1 chr9 . exon 905537 906361 . + . ID=Thaps24049.1;Parent=Thaps24049;constitutive=1;rank=1 chr9 . CDS 906451 906466 . + 0 ID=Thaps24049;Parent=Thaps24049;rank=2 chr9 . exon 906451 906466 . + . ID=Thaps24049.2;Parent=Thaps24049;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 906576 906706 . + 0 ID=Thaps24049;Parent=Thaps24049;rank=3 chr9 . exon 906576 906706 . + . ID=Thaps24049.3;Parent=Thaps24049;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 906808 907094 . + 0 ID=Thaps24049;Parent=Thaps24049;rank=4 chr9 . exon 906808 907094 . + . ID=Thaps24049.4;Parent=Thaps24049;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 907169 907622 . + 0 ID=Thaps24049;Parent=Thaps24049;rank=5 chr9 . exon 907169 907622 . + . ID=Thaps24049.5;Parent=Thaps24049;constitutive=1;ensembl_end_phase=1;rank=5 chr9 ensembl protein_coding_gene 911330 913544 . + . ID=Thaps263579;biotype=protein_coding;description=Inorganic phosphate transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C8J8];external_name=Thaps263579;logic_name=jgi_thaps3 chr9 ensembl transcript 911330 913544 . + . ID=Thaps263579;Parent=Thaps263579;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 911330 911760 . + 0 ID=Thaps263579;Parent=Thaps263579;rank=1 chr9 . exon 911330 911760 . + . ID=Thaps263579.1;Parent=Thaps263579;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 912112 912200 . + 0 ID=Thaps263579;Parent=Thaps263579;rank=2 chr9 . exon 912112 912200 . + . ID=Thaps263579.2;Parent=Thaps263579;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 912240 912417 . + 0 ID=Thaps263579;Parent=Thaps263579;rank=3 chr9 . exon 912240 912417 . + . ID=Thaps263579.3;Parent=Thaps263579;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 912630 912663 . + 0 ID=Thaps263579;Parent=Thaps263579;rank=4 chr9 . exon 912630 912663 . + . ID=Thaps263579.4;Parent=Thaps263579;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 912683 912848 . + 0 ID=Thaps263579;Parent=Thaps263579;rank=5 chr9 . exon 912683 912848 . + . ID=Thaps263579.5;Parent=Thaps263579;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 912925 913130 . + 0 ID=Thaps263579;Parent=Thaps263579;rank=6 chr9 . exon 912925 913130 . + . ID=Thaps263579.6;Parent=Thaps263579;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 913218 913544 . + 0 ID=Thaps263579;Parent=Thaps263579;rank=7 chr9 . exon 903801 904819 . + . ID=Thaps269450.2;Parent=Thaps269450;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 907659 909782 . - . ID=Thaps8153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8J7];external_name=Thaps8153;logic_name=jgi_thaps3 chr9 ensembl transcript 907659 909782 . - . ID=Thaps8153;Parent=Thaps8153;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 907659 909782 . - 0 ID=Thaps8153;Parent=Thaps8153;rank=1 chr9 . exon 907659 909782 . - . ID=Thaps8153.1;Parent=Thaps8153;constitutive=1;rank=1 chr9 . repeat_region 914168 914180 . ? . description=dust chr9 . repeat_region 915065 915087 . ? . description=dust chr9 . repeat_region 915065 915091 . ? . description=trf chr9 . exon 913218 913544 . + . ID=Thaps263579.7;Parent=Thaps263579;constitutive=1;rank=7 chr9 ensembl protein_coding_gene 915144 916592 . + . ID=Thaps263580;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8J9];external_name=Thaps263580;logic_name=jgi_thaps3 chr9 ensembl transcript 915144 916592 . + . ID=Thaps263580;Parent=Thaps263580;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 915144 915306 . + 0 ID=Thaps263580;Parent=Thaps263580;rank=1 chr9 . exon 915144 915306 . + . ID=Thaps263580.1;Parent=Thaps263580;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 915496 915735 . + 0 ID=Thaps263580;Parent=Thaps263580;rank=2 chr9 . exon 915496 915735 . + . ID=Thaps263580.2;Parent=Thaps263580;constitutive=1;rank=2 chr9 . CDS 915784 915960 . + 0 ID=Thaps263580;Parent=Thaps263580;rank=3 chr9 . exon 915784 915960 . + . ID=Thaps263580.3;Parent=Thaps263580;constitutive=1;rank=3 chr9 . CDS 916021 916229 . + 0 ID=Thaps263580;Parent=Thaps263580;rank=4 chr9 . exon 916021 916229 . + . ID=Thaps263580.4;Parent=Thaps263580;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 916372 916457 . + 0 ID=Thaps263580;Parent=Thaps263580;rank=5 chr9 . exon 916372 916457 . + . ID=Thaps263580.5;Parent=Thaps263580;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 916481 916592 . + 0 ID=Thaps263580;Parent=Thaps263580;rank=6 chr9 . exon 916481 916592 . + . ID=Thaps263580.6;Parent=Thaps263580;constitutive=1;ensembl_end_phase=1;rank=6 chr9 ensembl protein_coding_gene 921840 923456 . + . ID=Thaps263581;biotype=protein_coding;description=Sodium phosphate cotransporter [Source:UniProtKB/TrEMBL%3BAcc:B8C8K0];external_name=Thaps263581;logic_name=jgi_thaps3 chr9 ensembl transcript 921840 923456 . + . ID=Thaps263581;Parent=Thaps263581;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 921840 922067 . + 0 ID=Thaps263581;Parent=Thaps263581;rank=1 chr9 . exon 921840 922067 . + . ID=Thaps263581.1;Parent=Thaps263581;constitutive=1;rank=1 chr9 . CDS 922168 922600 . + 0 ID=Thaps263581;Parent=Thaps263581;rank=2 chr9 . exon 922168 922600 . + . ID=Thaps263581.2;Parent=Thaps263581;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 922631 922788 . + 0 ID=Thaps263581;Parent=Thaps263581;rank=3 chr9 . exon 922631 922788 . + . ID=Thaps263581.3;Parent=Thaps263581;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 922854 923003 . + 0 ID=Thaps263581;Parent=Thaps263581;rank=4 chr9 . exon 922854 923003 . + . ID=Thaps263581.4;Parent=Thaps263581;constitutive=1;rank=4 chr9 . CDS 923088 923456 . + 0 ID=Thaps263581;Parent=Thaps263581;rank=5 chr9 . exon 923088 923456 . + . ID=Thaps263581.5;Parent=Thaps263581;constitutive=1;rank=5 chr9 ensembl protein_coding_gene 925631 927651 . + . ID=Thaps24051;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8K2];external_name=Thaps24051;logic_name=jgi_thaps3 chr9 ensembl transcript 925631 927651 . + . ID=Thaps24051;Parent=Thaps24051;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 925631 925750 . + 0 ID=Thaps24051;Parent=Thaps24051;rank=1 chr9 . exon 925631 925750 . + . ID=Thaps24051.1;Parent=Thaps24051;constitutive=1;rank=1 chr9 . CDS 925991 926038 . + 0 ID=Thaps24051;Parent=Thaps24051;rank=2 chr9 . exon 925991 926038 . + . ID=Thaps24051.2;Parent=Thaps24051;constitutive=1;rank=2 chr9 . CDS 926100 926192 . + 0 ID=Thaps24051;Parent=Thaps24051;rank=3 chr9 . exon 926100 926192 . + . ID=Thaps24051.3;Parent=Thaps24051;constitutive=1;rank=3 chr9 . CDS 926356 927651 . + 0 ID=Thaps24051;Parent=Thaps24051;rank=4 chr9 . exon 926356 927651 . + . ID=Thaps24051.4;Parent=Thaps24051;constitutive=1;rank=4 chr9 ensembl protein_coding_gene 923982 925037 . - . ID=Thaps8157;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8K1];external_name=Thaps8157;logic_name=jgi_thaps3 chr9 ensembl transcript 923982 925037 . - . ID=Thaps8157;Parent=Thaps8157;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 923982 925037 . - 0 ID=Thaps8157;Parent=Thaps8157;rank=1 chr9 . exon 923982 925037 . - . ID=Thaps8157.1;Parent=Thaps8157;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 927781 931055 . - . ID=Thaps8159;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8K3];external_name=Thaps8159;logic_name=jgi_thaps3 chr9 ensembl transcript 927781 931055 . - . ID=Thaps8159;Parent=Thaps8159;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 927781 930089 . - 0 ID=Thaps8159;Parent=Thaps8159;rank=3 chr9 . exon 927781 930089 . - . ID=Thaps8159.3;Parent=Thaps8159;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 930163 930471 . - 0 ID=Thaps8159;Parent=Thaps8159;rank=2 chr9 . exon 930163 930471 . - . ID=Thaps8159.2;Parent=Thaps8159;constitutive=1;rank=2 chr9 . CDS 930563 931055 . - 0 ID=Thaps8159;Parent=Thaps8159;rank=1 chr9 . exon 930563 931055 . - . ID=Thaps8159.1;Parent=Thaps8159;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . repeat_region 937521 937545 . ? . description=trf chr9 . repeat_region 937791 937820 . ? . description=trf chr9 . repeat_region 937795 937820 . ? . description=dust chr9 . repeat_region 941373 941429 . ? . description=trf chr9 . repeat_region 942451 942458 . ? . description=dust chr9 ensembl protein_coding_gene 934030 934217 . + . ID=Thaps263583;biotype=protein_coding;description=Ankyrin domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8K4];external_name=Thaps263583;logic_name=jgi_thaps3 chr9 ensembl transcript 934030 934217 . + . ID=Thaps263583;Parent=Thaps263583;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 934030 934217 . + 0 ID=Thaps263583;Parent=Thaps263583;rank=1 chr9 . exon 934030 934217 . + . ID=Thaps263583.1;Parent=Thaps263583;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 942514 944943 . - . ID=Thaps269452;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8K7];external_name=Thaps269452;logic_name=jgi_thaps3 chr9 ensembl transcript 942514 944943 . - . ID=Thaps269452;Parent=Thaps269452;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 942514 943467 . - 0 ID=Thaps269452;Parent=Thaps269452;rank=3 chr9 . exon 942514 943467 . - . ID=Thaps269452.3;Parent=Thaps269452;constitutive=1;rank=3 chr9 . CDS 943549 943671 . - 0 ID=Thaps269452;Parent=Thaps269452;rank=2 chr9 . CDS 943960 944943 . - 0 ID=Thaps269452;Parent=Thaps269452;rank=1 chr9 ensembl protein_coding_gene 938438 940297 . + . ID=Thaps36204;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C8K6];external_name=Thaps36204;logic_name=jgi_thaps3 chr9 ensembl transcript 938438 940297 . + . ID=Thaps36204;Parent=Thaps36204;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 938438 939510 . + 0 ID=Thaps36204;Parent=Thaps36204;rank=1 chr9 . exon 938438 939510 . + . ID=Thaps36204.1;Parent=Thaps36204;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 939619 940297 . + 0 ID=Thaps36204;Parent=Thaps36204;rank=2 chr9 . exon 939619 940297 . + . ID=Thaps36204.2;Parent=Thaps36204;constitutive=1;ensembl_end_phase=1;rank=2 chr9 ensembl protein_coding_gene 935791 936477 . - . ID=Thaps8161;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8K5];external_name=Thaps8161;logic_name=jgi_thaps3 chr9 ensembl transcript 935791 936477 . - . ID=Thaps8161;Parent=Thaps8161;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 935791 935859 . - 0 ID=Thaps8161;Parent=Thaps8161;rank=3 chr9 . exon 935791 935859 . - . ID=Thaps8161.3;Parent=Thaps8161;constitutive=1;rank=3 chr9 . CDS 935921 935992 . - 0 ID=Thaps8161;Parent=Thaps8161;rank=2 chr9 . exon 935921 935992 . - . ID=Thaps8161.2;Parent=Thaps8161;constitutive=1;rank=2 chr9 . CDS 936235 936477 . - 0 ID=Thaps8161;Parent=Thaps8161;rank=1 chr9 . exon 936235 936477 . - . ID=Thaps8161.1;Parent=Thaps8161;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 951863 952723 . + . ID=Thaps15259;biotype=protein_coding;description=RS1%2C ribosomal protein 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C8K9];external_name=RS1;logic_name=jgi_thaps3 chr9 ensembl transcript 951863 952723 . + . ID=Thaps15259;Parent=Thaps15259;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 951863 952723 . + 0 ID=Thaps15259;Parent=Thaps15259;rank=1 chr9 . exon 951863 952723 . + . ID=Thaps15259.1;Parent=Thaps15259;constitutive=1;rank=1 chr9 . exon 943549 943671 . - . ID=Thaps269452.2;Parent=Thaps269452;constitutive=1;rank=2 chr9 . exon 943960 944943 . - . ID=Thaps269452.1;Parent=Thaps269452;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 947645 948934 . + . ID=Thaps8164;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8K8];external_name=Thaps8164;logic_name=jgi_thaps3 chr9 ensembl transcript 947645 948934 . + . ID=Thaps8164;Parent=Thaps8164;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 947645 947846 . + 0 ID=Thaps8164;Parent=Thaps8164;rank=1 chr9 . exon 947645 947846 . + . ID=Thaps8164.1;Parent=Thaps8164;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 947974 948077 . + 0 ID=Thaps8164;Parent=Thaps8164;rank=2 chr9 . exon 947974 948077 . + . ID=Thaps8164.2;Parent=Thaps8164;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 948362 948934 . + 0 ID=Thaps8164;Parent=Thaps8164;rank=3 chr9 . exon 948362 948934 . + . ID=Thaps8164.3;Parent=Thaps8164;constitutive=1;rank=3 chr9 . repeat_region 955779 955804 . ? . description=dust chr9 . repeat_region 955781 955804 . ? . description=trf chr9 . repeat_region 958474 958481 . ? . description=dust chr9 . repeat_region 958711 958721 . ? . description=dust chr9 . repeat_region 959049 959064 . ? . description=dust chr9 . repeat_region 959137 959145 . ? . description=dust chr9 . repeat_region 959267 959274 . ? . description=dust chr9 . repeat_region 959320 959352 . ? . description=trf chr9 . repeat_region 959435 959488 . ? . description=dust chr9 . repeat_region 959436 959488 . ? . description=trf chr9 . repeat_region 959439 959485 . ? . description=trf chr9 . repeat_region 960389 960407 . ? . description=dust chr9 . repeat_region 961406 961429 . ? . description=trf chr9 . repeat_region 961406 961429 . ? . description=dust chr9 ensembl protein_coding_gene 955008 957631 . + . ID=Thaps24053;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8L1];external_name=Thaps24053;logic_name=jgi_thaps3 chr9 ensembl transcript 955008 957631 . + . ID=Thaps24053;Parent=Thaps24053;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 955008 956040 . + 0 ID=Thaps24053;Parent=Thaps24053;rank=1 chr9 . exon 955008 956040 . + . ID=Thaps24053.1;Parent=Thaps24053;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 956118 957631 . + 0 ID=Thaps24053;Parent=Thaps24053;rank=2 chr9 . exon 956118 957631 . + . ID=Thaps24053.2;Parent=Thaps24053;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 957834 958463 . - . ID=Thaps29359;biotype=protein_coding;description=Synthase of ATP synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C8L2];external_name=Thaps29359;logic_name=jgi_thaps3 chr9 ensembl transcript 957834 958463 . - . ID=Thaps29359;Parent=Thaps29359;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 957834 958463 . - 0 ID=Thaps29359;Parent=Thaps29359;rank=1 chr9 . exon 957834 958463 . - . ID=Thaps29359.1;Parent=Thaps29359;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 953145 953711 . + . ID=Thaps8166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8L0];external_name=Thaps8166;logic_name=jgi_thaps3 chr9 ensembl transcript 953145 953711 . + . ID=Thaps8166;Parent=Thaps8166;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 953145 953711 . + 0 ID=Thaps8166;Parent=Thaps8166;rank=1 chr9 . exon 953145 953711 . + . ID=Thaps8166.1;Parent=Thaps8166;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 963726 965780 . + . ID=Thaps20404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8L3];external_name=Thaps20404;logic_name=jgi_thaps3 chr9 ensembl transcript 963726 965780 . + . ID=Thaps20404;Parent=Thaps20404;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 963726 963830 . + 0 ID=Thaps20404;Parent=Thaps20404;rank=1 chr9 . exon 963726 963830 . + . ID=Thaps20404.1;Parent=Thaps20404;constitutive=1;rank=1 chr9 . CDS 965676 965780 . + 0 ID=Thaps20404;Parent=Thaps20404;rank=2 chr9 . exon 965676 965780 . + . ID=Thaps20404.2;Parent=Thaps20404;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 969189 971081 . - . ID=Thaps24056;biotype=protein_coding;description=Myosin light chain kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C8L4];external_name=MLK1;logic_name=jgi_thaps3 chr9 ensembl transcript 969189 971081 . - . ID=Thaps24056;Parent=Thaps24056;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 969189 969245 . - 0 ID=Thaps24056;Parent=Thaps24056;rank=4 chr9 . exon 969189 969245 . - . ID=Thaps24056.4;Parent=Thaps24056;constitutive=1;rank=4 chr9 . CDS 969339 970196 . - 0 ID=Thaps24056;Parent=Thaps24056;rank=3 chr9 . exon 969339 970196 . - . ID=Thaps24056.3;Parent=Thaps24056;constitutive=1;rank=3 chr9 . CDS 970603 970686 . - 0 ID=Thaps24056;Parent=Thaps24056;rank=2 chr9 . exon 970603 970686 . - . ID=Thaps24056.2;Parent=Thaps24056;constitutive=1;rank=2 chr9 . CDS 971046 971081 . - 0 ID=Thaps24056;Parent=Thaps24056;rank=1 chr9 . exon 971046 971081 . - . ID=Thaps24056.1;Parent=Thaps24056;constitutive=1;rank=1 chr9 . repeat_region 979965 980388 . ? . description=trf chr9 ensembl protein_coding_gene 973861 974769 . + . ID=Thaps24057;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8L5];external_name=Thaps24057;logic_name=jgi_thaps3 chr9 ensembl transcript 973861 974769 . + . ID=Thaps24057;Parent=Thaps24057;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 973861 974570 . + 0 ID=Thaps24057;Parent=Thaps24057;rank=1 chr9 . exon 973861 974570 . + . ID=Thaps24057.1;Parent=Thaps24057;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 974661 974769 . + 0 ID=Thaps24057;Parent=Thaps24057;rank=2 chr9 . exon 974661 974769 . + . ID=Thaps24057.2;Parent=Thaps24057;constitutive=1;ensembl_end_phase=1;rank=2 chr9 ensembl protein_coding_gene 975598 977928 . - . ID=Thaps269456;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8L6];external_name=Thaps269456;logic_name=jgi_thaps3 chr9 ensembl transcript 975598 977928 . - . ID=Thaps269456;Parent=Thaps269456;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 975598 976143 . - 0 ID=Thaps269456;Parent=Thaps269456;rank=3 chr9 . exon 975598 976143 . - . ID=Thaps269456.3;Parent=Thaps269456;constitutive=1;rank=3 chr9 . CDS 976237 976434 . - 0 ID=Thaps269456;Parent=Thaps269456;rank=2 chr9 . exon 976237 976434 . - . ID=Thaps269456.2;Parent=Thaps269456;constitutive=1;rank=2 chr9 . CDS 976807 977928 . - 0 ID=Thaps269456;Parent=Thaps269456;rank=1 chr9 . exon 976807 977928 . - . ID=Thaps269456.1;Parent=Thaps269456;constitutive=1;rank=1 chr9 . repeat_region 986136 986143 . ? . description=dust chr9 . repeat_region 988200 988210 . ? . description=dust chr9 . repeat_region 988430 988437 . ? . description=dust chr9 . repeat_region 991844 991928 . ? . description=dust chr9 ensembl protein_coding_gene 986476 988166 . - . ID=Thaps24060;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8L8];external_name=Thaps24060;logic_name=jgi_thaps3 chr9 ensembl transcript 986476 988166 . - . ID=Thaps24060;Parent=Thaps24060;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 986476 987034 . - 0 ID=Thaps24060;Parent=Thaps24060;rank=4 chr9 . exon 986476 987034 . - . ID=Thaps24060.4;Parent=Thaps24060;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 987117 987205 . - 0 ID=Thaps24060;Parent=Thaps24060;rank=3 chr9 . exon 987117 987205 . - . ID=Thaps24060.3;Parent=Thaps24060;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 987332 987677 . - 0 ID=Thaps24060;Parent=Thaps24060;rank=2 chr9 . exon 987332 987677 . - . ID=Thaps24060.2;Parent=Thaps24060;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 987841 988166 . - 0 ID=Thaps24060;Parent=Thaps24060;rank=1 chr9 . exon 987841 988166 . - . ID=Thaps24060.1;Parent=Thaps24060;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 990715 992624 . - . ID=Thaps269459;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8L9];external_name=Thaps269459;logic_name=jgi_thaps3 chr9 ensembl transcript 990715 992624 . - . ID=Thaps269459;Parent=Thaps269459;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 990715 991273 . - 0 ID=Thaps269459;Parent=Thaps269459;rank=5 chr9 . exon 990715 991273 . - . ID=Thaps269459.5;Parent=Thaps269459;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . CDS 991356 991444 . - 0 ID=Thaps269459;Parent=Thaps269459;rank=4 chr9 . exon 991356 991444 . - . ID=Thaps269459.4;Parent=Thaps269459;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 991551 991622 . - 0 ID=Thaps269459;Parent=Thaps269459;rank=3 chr9 . exon 991551 991622 . - . ID=Thaps269459.3;Parent=Thaps269459;constitutive=1;rank=3 chr9 . CDS 991939 992212 . - 0 ID=Thaps269459;Parent=Thaps269459;rank=2 chr9 . exon 991939 992212 . - . ID=Thaps269459.2;Parent=Thaps269459;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 992428 992624 . - 0 ID=Thaps269459;Parent=Thaps269459;rank=1 chr9 . exon 992428 992624 . - . ID=Thaps269459.1;Parent=Thaps269459;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 984391 985088 . - . ID=Thaps8174;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8L7];external_name=Thaps8174;logic_name=jgi_thaps3 chr9 ensembl transcript 984391 985088 . - . ID=Thaps8174;Parent=Thaps8174;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 984391 984680 . - 0 ID=Thaps8174;Parent=Thaps8174;rank=2 chr9 . exon 984391 984680 . - . ID=Thaps8174.2;Parent=Thaps8174;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 984896 985088 . - 0 ID=Thaps8174;Parent=Thaps8174;rank=1 chr9 . exon 984896 985088 . - . ID=Thaps8174.1;Parent=Thaps8174;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . repeat_region 1002167 1002387 . - . description=Copia9I_TP chr9 . repeat_region 1002506 1002790 . + . description=TE2c_TP chr9 ensembl protein_coding_gene 996961 1001816 . + . ID=Thaps24063;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M2];external_name=Thaps24063;logic_name=jgi_thaps3 chr9 ensembl transcript 996961 1001816 . + . ID=Thaps24063;Parent=Thaps24063;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 996961 1000458 . + 0 ID=Thaps24063;Parent=Thaps24063;rank=1 chr9 . exon 996961 1000458 . + . ID=Thaps24063.1;Parent=Thaps24063;constitutive=1;rank=1 chr9 . CDS 1000523 1000767 . + 0 ID=Thaps24063;Parent=Thaps24063;rank=2 chr9 . exon 1000523 1000767 . + . ID=Thaps24063.2;Parent=Thaps24063;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 1000844 1001816 . + 0 ID=Thaps24063;Parent=Thaps24063;rank=3 chr9 . exon 1000844 1001816 . + . ID=Thaps24063.3;Parent=Thaps24063;constitutive=1;ensembl_end_phase=1;rank=3 chr9 ensembl protein_coding_gene 993700 994422 . + . ID=Thaps36213;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M0];external_name=Thaps36213;logic_name=jgi_thaps3 chr9 ensembl transcript 993700 994422 . + . ID=Thaps36213;Parent=Thaps36213;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 993700 994091 . + 0 ID=Thaps36213;Parent=Thaps36213;rank=1 chr9 . exon 993700 994091 . + . ID=Thaps36213.1;Parent=Thaps36213;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 994125 994422 . + 0 ID=Thaps36213;Parent=Thaps36213;rank=2 chr9 . exon 994125 994422 . + . ID=Thaps36213.2;Parent=Thaps36213;constitutive=1;ensembl_end_phase=1;rank=2 chr9 ensembl protein_coding_gene 995074 996302 . + . ID=Thaps41754;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M1];external_name=Thaps41754;logic_name=jgi_thaps3 chr9 ensembl transcript 995074 996302 . + . ID=Thaps41754;Parent=Thaps41754;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 995074 995536 . + 0 ID=Thaps41754;Parent=Thaps41754;rank=1 chr9 . exon 995074 995536 . + . ID=Thaps41754.1;Parent=Thaps41754;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 995621 995698 . + 0 ID=Thaps41754;Parent=Thaps41754;rank=2 chr9 . exon 995621 995698 . + . ID=Thaps41754.2;Parent=Thaps41754;constitutive=1;rank=2 chr9 . CDS 995776 996083 . + 0 ID=Thaps41754;Parent=Thaps41754;rank=3 chr9 . exon 995776 996083 . + . ID=Thaps41754.3;Parent=Thaps41754;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 996165 996302 . + 0 ID=Thaps41754;Parent=Thaps41754;rank=4 chr9 . exon 996165 996302 . + . ID=Thaps41754.4;Parent=Thaps41754;constitutive=1;rank=4 chr9 . repeat_region 1006495 1006509 . ? . description=dust chr9 . repeat_region 1007360 1007379 . ? . description=trf chr9 . repeat_region 1007360 1007379 . ? . description=dust chr9 . repeat_region 1007916 1007983 . ? . description=trf chr9 ensembl protein_coding_gene 1003484 1005908 . - . ID=Thaps8180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M3];external_name=Thaps8180;logic_name=jgi_thaps3 chr9 ensembl transcript 1003484 1005908 . - . ID=Thaps8180;Parent=Thaps8180;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1003484 1004185 . - 0 ID=Thaps8180;Parent=Thaps8180;rank=2 chr9 . exon 1003484 1004185 . - . ID=Thaps8180.2;Parent=Thaps8180;constitutive=1;rank=2 chr9 . CDS 1004283 1005908 . - 0 ID=Thaps8180;Parent=Thaps8180;rank=1 chr9 . exon 1004283 1005908 . - . ID=Thaps8180.1;Parent=Thaps8180;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1006737 1012619 . + . ID=Thaps8181;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M4];external_name=Thaps8181;logic_name=jgi_thaps3 chr9 ensembl transcript 1006737 1012619 . + . ID=Thaps8181;Parent=Thaps8181;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1006737 1012619 . + 0 ID=Thaps8181;Parent=Thaps8181;rank=1 chr9 . exon 1006737 1012619 . + . ID=Thaps8181.1;Parent=Thaps8181;constitutive=1;rank=1 chr9 . repeat_region 1014915 1015078 . - . description=MuDR2_TP chr9 ensembl protein_coding_gene 1017721 1019237 . - . ID=Thaps24064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M7];external_name=Thaps24064;logic_name=jgi_thaps3 chr9 ensembl transcript 1017721 1019237 . - . ID=Thaps24064;Parent=Thaps24064;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1017721 1018506 . - 0 ID=Thaps24064;Parent=Thaps24064;rank=2 chr9 . exon 1017721 1018506 . - . ID=Thaps24064.2;Parent=Thaps24064;constitutive=1;rank=2 chr9 . CDS 1018599 1019237 . - 0 ID=Thaps24064;Parent=Thaps24064;rank=1 chr9 . exon 1018599 1019237 . - . ID=Thaps24064.1;Parent=Thaps24064;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1021611 1023245 . - . ID=Thaps24066;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M8];external_name=Thaps24066;logic_name=jgi_thaps3 chr9 ensembl transcript 1021611 1023245 . - . ID=Thaps24066;Parent=Thaps24066;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1021611 1023245 . - 0 ID=Thaps24066;Parent=Thaps24066;rank=1 chr9 . exon 1021611 1023245 . - . ID=Thaps24066.1;Parent=Thaps24066;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1012831 1013868 . - . ID=Thaps8182;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M5];external_name=Thaps8182;logic_name=jgi_thaps3 chr9 ensembl transcript 1012831 1013868 . - . ID=Thaps8182;Parent=Thaps8182;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1012831 1013868 . - 0 ID=Thaps8182;Parent=Thaps8182;rank=1 chr9 . exon 1012831 1013868 . - . ID=Thaps8182.1;Parent=Thaps8182;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1015593 1016699 . + . ID=Thaps8183;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M6];external_name=Thaps8183;logic_name=jgi_thaps3 chr9 ensembl transcript 1015593 1016699 . + . ID=Thaps8183;Parent=Thaps8183;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1015593 1016699 . + 0 ID=Thaps8183;Parent=Thaps8183;rank=1 chr9 . exon 1015593 1016699 . + . ID=Thaps8183.1;Parent=Thaps8183;constitutive=1;rank=1 chr9 . repeat_region 1026093 1026124 . ? . description=trf chr9 . repeat_region 1026224 1026254 . ? . description=trf chr9 . repeat_region 1027180 1027543 . + . description=Gypsy3LTR_TP chr9 . repeat_region 1027539 1027589 . + . description=Gypsy3LTR_TP chr9 . repeat_region 1028162 1028198 . ? . description=trf chr9 . repeat_region 1029030 1029039 . ? . description=dust chr9 ensembl protein_coding_gene 1023995 1026345 . + . ID=Thaps24067;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8M9];external_name=Thaps24067;logic_name=jgi_thaps3 chr9 ensembl transcript 1023995 1026345 . + . ID=Thaps24067;Parent=Thaps24067;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1023995 1024878 . + 0 ID=Thaps24067;Parent=Thaps24067;rank=1 chr9 . exon 1023995 1024878 . + . ID=Thaps24067.1;Parent=Thaps24067;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 1025031 1025634 . + 0 ID=Thaps24067;Parent=Thaps24067;rank=2 chr9 . exon 1025031 1025634 . + . ID=Thaps24067.2;Parent=Thaps24067;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1025717 1025819 . + 0 ID=Thaps24067;Parent=Thaps24067;rank=3 chr9 . exon 1025717 1025819 . + . ID=Thaps24067.3;Parent=Thaps24067;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 1025921 1025938 . + 0 ID=Thaps24067;Parent=Thaps24067;rank=4 chr9 . exon 1025921 1025938 . + . ID=Thaps24067.4;Parent=Thaps24067;constitutive=1;rank=4 chr9 . CDS 1026065 1026124 . + 0 ID=Thaps24067;Parent=Thaps24067;rank=5 chr9 . exon 1026065 1026124 . + . ID=Thaps24067.5;Parent=Thaps24067;constitutive=1;rank=5 chr9 . CDS 1026215 1026345 . + 0 ID=Thaps24067;Parent=Thaps24067;rank=6 chr9 . exon 1026215 1026345 . + . ID=Thaps24067.6;Parent=Thaps24067;constitutive=1;ensembl_end_phase=2;rank=6 chr9 ensembl protein_coding_gene 1028622 1029817 . + . ID=Thaps24068;biotype=protein_coding;description=SNARE component [Source:UniProtKB/TrEMBL%3BAcc:B8C8N0];external_name=Thaps24068;logic_name=jgi_thaps3 chr9 ensembl transcript 1028622 1029817 . + . ID=Thaps24068;Parent=Thaps24068;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1028622 1028813 . + 0 ID=Thaps24068;Parent=Thaps24068;rank=1 chr9 . exon 1028622 1028813 . + . ID=Thaps24068.1;Parent=Thaps24068;constitutive=1;rank=1 chr9 . CDS 1029158 1029817 . + 0 ID=Thaps24068;Parent=Thaps24068;rank=2 chr9 . exon 1029158 1029817 . + . ID=Thaps24068.2;Parent=Thaps24068;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 1031612 1032608 . - . ID=Thaps36202;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N1];external_name=Thaps36202;logic_name=jgi_thaps3 chr9 ensembl transcript 1031612 1032608 . - . ID=Thaps36202;Parent=Thaps36202;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1031612 1032340 . - 0 ID=Thaps36202;Parent=Thaps36202;rank=2 chr9 . exon 1031612 1032340 . - . ID=Thaps36202.2;Parent=Thaps36202;constitutive=1;rank=2 chr9 . CDS 1032426 1032608 . - 0 ID=Thaps36202;Parent=Thaps36202;rank=1 chr9 ensembl protein_coding_gene 1042144 1042684 . + . ID=Thaps263598;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N4];external_name=Thaps263598;logic_name=jgi_thaps3 chr9 ensembl transcript 1042144 1042684 . + . ID=Thaps263598;Parent=Thaps263598;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1042144 1042684 . + 0 ID=Thaps263598;Parent=Thaps263598;rank=1 chr9 . exon 1042144 1042684 . + . ID=Thaps263598.1;Parent=Thaps263598;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . exon 1032426 1032608 . - . ID=Thaps36202.1;Parent=Thaps36202;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1033026 1033799 . - . ID=Thaps36223;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N2];external_name=Thaps36223;logic_name=jgi_thaps3 chr9 ensembl transcript 1033026 1033799 . - . ID=Thaps36223;Parent=Thaps36223;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1033026 1033799 . - 0 ID=Thaps36223;Parent=Thaps36223;rank=1 chr9 . exon 1033026 1033799 . - . ID=Thaps36223.1;Parent=Thaps36223;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1035639 1036973 . - . ID=Thaps8190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N3];external_name=Thaps8190;logic_name=jgi_thaps3 chr9 ensembl transcript 1035639 1036973 . - . ID=Thaps8190;Parent=Thaps8190;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1035639 1036973 . - 0 ID=Thaps8190;Parent=Thaps8190;rank=1 chr9 . exon 1035639 1036973 . - . ID=Thaps8190.1;Parent=Thaps8190;constitutive=1;rank=1 chr9 . repeat_region 1049959 1050004 . - . description=Gypsy3LTR_TP chr9 ensembl protein_coding_gene 1050671 1053112 . + . ID=Thaps24072;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N6];external_name=Thaps24072;logic_name=jgi_thaps3 chr9 ensembl transcript 1050671 1053112 . + . ID=Thaps24072;Parent=Thaps24072;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1050671 1053112 . + 0 ID=Thaps24072;Parent=Thaps24072;rank=1 chr9 . exon 1050671 1053112 . + . ID=Thaps24072.1;Parent=Thaps24072;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1046381 1049501 . + . ID=Thaps263599;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N5];external_name=Thaps263599;logic_name=jgi_thaps3 chr9 ensembl transcript 1046381 1049501 . + . ID=Thaps263599;Parent=Thaps263599;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1046381 1046795 . + 0 ID=Thaps263599;Parent=Thaps263599;rank=1 chr9 . exon 1046381 1046795 . + . ID=Thaps263599.1;Parent=Thaps263599;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 1046856 1048252 . + 0 ID=Thaps263599;Parent=Thaps263599;rank=2 chr9 . exon 1046856 1048252 . + . ID=Thaps263599.2;Parent=Thaps263599;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 1048318 1048562 . + 0 ID=Thaps263599;Parent=Thaps263599;rank=3 chr9 . exon 1048318 1048562 . + . ID=Thaps263599.3;Parent=Thaps263599;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 1048641 1049501 . + 0 ID=Thaps263599;Parent=Thaps263599;rank=4 chr9 . exon 1048641 1049501 . + . ID=Thaps263599.4;Parent=Thaps263599;constitutive=1;rank=4 chr9 . repeat_region 1057910 1057936 . ? . description=trf chr9 . repeat_region 1059790 1059804 . ? . description=dust chr9 . repeat_region 1061913 1061957 . ? . description=trf chr9 ensembl protein_coding_gene 1053247 1059778 . - . ID=Thaps24073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N7];external_name=Thaps24073;logic_name=jgi_thaps3 chr9 ensembl transcript 1053247 1059778 . - . ID=Thaps24073;Parent=Thaps24073;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1053247 1054203 . - 0 ID=Thaps24073;Parent=Thaps24073;rank=5 chr9 . exon 1053247 1054203 . - . ID=Thaps24073.5;Parent=Thaps24073;constitutive=1;rank=5 chr9 . CDS 1054288 1055775 . - 0 ID=Thaps24073;Parent=Thaps24073;rank=4 chr9 . exon 1054288 1055775 . - . ID=Thaps24073.4;Parent=Thaps24073;constitutive=1;rank=4 chr9 . CDS 1055854 1058877 . - 0 ID=Thaps24073;Parent=Thaps24073;rank=3 chr9 . exon 1055854 1058877 . - . ID=Thaps24073.3;Parent=Thaps24073;constitutive=1;rank=3 chr9 . CDS 1059027 1059449 . - 0 ID=Thaps24073;Parent=Thaps24073;rank=2 chr9 . exon 1059027 1059449 . - . ID=Thaps24073.2;Parent=Thaps24073;constitutive=1;rank=2 chr9 . CDS 1059590 1059778 . - 0 ID=Thaps24073;Parent=Thaps24073;rank=1 chr9 . exon 1059590 1059778 . - . ID=Thaps24073.1;Parent=Thaps24073;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1060316 1061683 . + . ID=Thaps24074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N8];external_name=Thaps24074;logic_name=jgi_thaps3 chr9 ensembl transcript 1060316 1061683 . + . ID=Thaps24074;Parent=Thaps24074;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1060316 1061683 . + 0 ID=Thaps24074;Parent=Thaps24074;rank=1 chr9 . exon 1060316 1061683 . + . ID=Thaps24074.1;Parent=Thaps24074;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1062311 1064134 . - . ID=Thaps12983;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8N9];external_name=Thaps12983;logic_name=jgi_thaps3 chr9 ensembl transcript 1062311 1064134 . - . ID=Thaps12983;Parent=Thaps12983;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1062311 1063288 . - 0 ID=Thaps12983;Parent=Thaps12983;rank=2 chr9 . exon 1062311 1063288 . - . ID=Thaps12983.2;Parent=Thaps12983;constitutive=1;rank=2 chr9 . CDS 1063682 1064134 . - 0 ID=Thaps12983;Parent=Thaps12983;rank=1 chr9 . exon 1063682 1064134 . - . ID=Thaps12983.1;Parent=Thaps12983;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1065574 1071987 . - . ID=Thaps24076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P0];external_name=Thaps24076;logic_name=jgi_thaps3 chr9 ensembl transcript 1065574 1071987 . - . ID=Thaps24076;Parent=Thaps24076;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1065574 1067043 . - 0 ID=Thaps24076;Parent=Thaps24076;rank=4 chr9 . exon 1065574 1067043 . - . ID=Thaps24076.4;Parent=Thaps24076;constitutive=1;rank=4 chr9 . CDS 1067105 1067195 . - 0 ID=Thaps24076;Parent=Thaps24076;rank=3 chr9 . exon 1067105 1067195 . - . ID=Thaps24076.3;Parent=Thaps24076;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 1067232 1067487 . - 0 ID=Thaps24076;Parent=Thaps24076;rank=2 chr9 . exon 1067232 1067487 . - . ID=Thaps24076.2;Parent=Thaps24076;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1067697 1071987 . - 0 ID=Thaps24076;Parent=Thaps24076;rank=1 chr9 . exon 1067697 1071987 . - . ID=Thaps24076.1;Parent=Thaps24076;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . repeat_region 1073102 1073121 . ? . description=dust chr9 . repeat_region 1081876 1081901 . ? . description=trf chr9 . repeat_region 1081876 1081901 . ? . description=dust chr9 ensembl protein_coding_gene 1072870 1074071 . + . ID=Thaps24077;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P1];external_name=Thaps24077;logic_name=jgi_thaps3 chr9 ensembl transcript 1072870 1074071 . + . ID=Thaps24077;Parent=Thaps24077;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1072870 1072956 . + 0 ID=Thaps24077;Parent=Thaps24077;rank=1 chr9 . exon 1072870 1072956 . + . ID=Thaps24077.1;Parent=Thaps24077;constitutive=1;rank=1 chr9 . CDS 1073124 1074071 . + 0 ID=Thaps24077;Parent=Thaps24077;rank=2 chr9 . exon 1073124 1074071 . + . ID=Thaps24077.2;Parent=Thaps24077;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 1076856 1081838 . - . ID=Thaps24078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P3];external_name=Thaps24078;logic_name=jgi_thaps3 chr9 ensembl transcript 1076856 1081838 . - . ID=Thaps24078;Parent=Thaps24078;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1076856 1081838 . - 0 ID=Thaps24078;Parent=Thaps24078;rank=1 chr9 . exon 1076856 1081838 . - . ID=Thaps24078.1;Parent=Thaps24078;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1074668 1076588 . + . ID=Thaps8199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P2];external_name=Thaps8199;logic_name=jgi_thaps3 chr9 ensembl transcript 1074668 1076588 . + . ID=Thaps8199;Parent=Thaps8199;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1074668 1074930 . + 0 ID=Thaps8199;Parent=Thaps8199;rank=1 chr9 . exon 1074668 1074930 . + . ID=Thaps8199.1;Parent=Thaps8199;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . CDS 1075115 1076588 . + 0 ID=Thaps8199;Parent=Thaps8199;rank=2 chr9 . exon 1075115 1076588 . + . ID=Thaps8199.2;Parent=Thaps8199;constitutive=1;ensembl_end_phase=1;rank=2 chr9 ensembl protein_coding_gene 1083089 1084052 . - . ID=Thaps16303;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P4];external_name=Thaps16303;logic_name=jgi_thaps3 chr9 ensembl transcript 1083089 1084052 . - . ID=Thaps16303;Parent=Thaps16303;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1083089 1083373 . - 0 ID=Thaps16303;Parent=Thaps16303;rank=3 chr9 . exon 1083089 1083373 . - . ID=Thaps16303.3;Parent=Thaps16303;constitutive=1;rank=3 chr9 . CDS 1083473 1083527 . - 0 ID=Thaps16303;Parent=Thaps16303;rank=2 chr9 . exon 1083473 1083527 . - . ID=Thaps16303.2;Parent=Thaps16303;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1083628 1084052 . - 0 ID=Thaps16303;Parent=Thaps16303;rank=1 chr9 . exon 1083628 1084052 . - . ID=Thaps16303.1;Parent=Thaps16303;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 1086282 1090426 . + . ID=Thaps24079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P5];external_name=Thaps24079;logic_name=jgi_thaps3 chr9 ensembl transcript 1086282 1090426 . + . ID=Thaps24079;Parent=Thaps24079;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1086282 1086567 . + 0 ID=Thaps24079;Parent=Thaps24079;rank=1 chr9 . exon 1086282 1086567 . + . ID=Thaps24079.1;Parent=Thaps24079;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 1086726 1090426 . + 0 ID=Thaps24079;Parent=Thaps24079;rank=2 chr9 . exon 1086726 1090426 . + . ID=Thaps24079.2;Parent=Thaps24079;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 1090986 1093111 . + . ID=Thaps8203;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P6];external_name=Thaps8203;logic_name=jgi_thaps3 chr9 ensembl transcript 1090986 1093111 . + . ID=Thaps8203;Parent=Thaps8203;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1090986 1092255 . + 0 ID=Thaps8203;Parent=Thaps8203;rank=1 chr9 . exon 1090986 1092255 . + . ID=Thaps8203.1;Parent=Thaps8203;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 1092329 1092507 . + 0 ID=Thaps8203;Parent=Thaps8203;rank=2 chr9 . CDS 1092605 1093111 . + 0 ID=Thaps8203;Parent=Thaps8203;rank=3 chr9 . repeat_region 1095807 1095870 . ? . description=dust chr9 . repeat_region 1095817 1095871 . ? . description=trf chr9 ensembl protein_coding_gene 1093579 1095694 . - . ID=Thaps36201;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P7];external_name=Thaps36201;logic_name=jgi_thaps3 chr9 ensembl transcript 1093579 1095694 . - . ID=Thaps36201;Parent=Thaps36201;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1093579 1094047 . - 0 ID=Thaps36201;Parent=Thaps36201;rank=7 chr9 . exon 1093579 1094047 . - . ID=Thaps36201.7;Parent=Thaps36201;constitutive=1;ensembl_end_phase=1;rank=7 chr9 . CDS 1094136 1094374 . - 0 ID=Thaps36201;Parent=Thaps36201;rank=6 chr9 . exon 1094136 1094374 . - . ID=Thaps36201.6;Parent=Thaps36201;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 1094585 1094755 . - 0 ID=Thaps36201;Parent=Thaps36201;rank=5 chr9 . exon 1094585 1094755 . - . ID=Thaps36201.5;Parent=Thaps36201;constitutive=1;rank=5 chr9 . CDS 1094838 1095095 . - 0 ID=Thaps36201;Parent=Thaps36201;rank=4 chr9 . exon 1094838 1095095 . - . ID=Thaps36201.4;Parent=Thaps36201;constitutive=1;rank=4 chr9 . CDS 1095184 1095395 . - 0 ID=Thaps36201;Parent=Thaps36201;rank=3 chr9 . exon 1095184 1095395 . - . ID=Thaps36201.3;Parent=Thaps36201;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 1095468 1095509 . - 0 ID=Thaps36201;Parent=Thaps36201;rank=2 chr9 . exon 1095468 1095509 . - . ID=Thaps36201.2;Parent=Thaps36201;constitutive=1;rank=2 chr9 . CDS 1095619 1095694 . - 0 ID=Thaps36201;Parent=Thaps36201;rank=1 chr9 . exon 1095619 1095694 . - . ID=Thaps36201.1;Parent=Thaps36201;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . exon 1092329 1092507 . + . ID=Thaps8203.2;Parent=Thaps8203;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . exon 1092605 1093111 . + . ID=Thaps8203.3;Parent=Thaps8203;constitutive=1;rank=3 chr9 ensembl protein_coding_gene 1096148 1099805 . + . ID=Thaps8205;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P8];external_name=Thaps8205;logic_name=jgi_thaps3 chr9 ensembl transcript 1096148 1099805 . + . ID=Thaps8205;Parent=Thaps8205;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1096148 1097602 . + 0 ID=Thaps8205;Parent=Thaps8205;rank=1 chr9 . exon 1096148 1097602 . + . ID=Thaps8205.1;Parent=Thaps8205;constitutive=1;rank=1 chr9 . CDS 1097702 1097764 . + 0 ID=Thaps8205;Parent=Thaps8205;rank=2 chr9 . exon 1097702 1097764 . + . ID=Thaps8205.2;Parent=Thaps8205;constitutive=1;rank=2 chr9 . CDS 1097852 1097932 . + 0 ID=Thaps8205;Parent=Thaps8205;rank=3 chr9 . exon 1097852 1097932 . + . ID=Thaps8205.3;Parent=Thaps8205;constitutive=1;rank=3 chr9 . CDS 1098011 1098046 . + 0 ID=Thaps8205;Parent=Thaps8205;rank=4 chr9 . exon 1098011 1098046 . + . ID=Thaps8205.4;Parent=Thaps8205;constitutive=1;rank=4 chr9 . CDS 1098121 1098180 . + 0 ID=Thaps8205;Parent=Thaps8205;rank=5 chr9 . exon 1098121 1098180 . + . ID=Thaps8205.5;Parent=Thaps8205;constitutive=1;rank=5 chr9 . CDS 1098229 1098331 . + 0 ID=Thaps8205;Parent=Thaps8205;rank=6 chr9 . exon 1098229 1098331 . + . ID=Thaps8205.6;Parent=Thaps8205;constitutive=1;ensembl_end_phase=1;rank=6 chr9 . CDS 1098415 1099805 . + 0 ID=Thaps8205;Parent=Thaps8205;rank=7 chr9 . exon 1098415 1099805 . + . ID=Thaps8205.7;Parent=Thaps8205;constitutive=1;ensembl_end_phase=2;rank=7 chr9 ensembl protein_coding_gene 1100329 1104098 . + . ID=Thaps8206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8P9];external_name=Thaps8206;logic_name=jgi_thaps3 chr9 ensembl transcript 1100329 1104098 . + . ID=Thaps8206;Parent=Thaps8206;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1100329 1100437 . + 0 ID=Thaps8206;Parent=Thaps8206;rank=1 chr9 . exon 1100329 1100437 . + . ID=Thaps8206.1;Parent=Thaps8206;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 1100490 1101965 . + 0 ID=Thaps8206;Parent=Thaps8206;rank=2 chr9 . exon 1100490 1101965 . + . ID=Thaps8206.2;Parent=Thaps8206;constitutive=1;rank=2 chr9 . CDS 1102098 1102148 . + 0 ID=Thaps8206;Parent=Thaps8206;rank=3 chr9 . CDS 1102252 1102871 . + 0 ID=Thaps8206;Parent=Thaps8206;rank=4 chr9 . CDS 1103136 1103319 . + 0 ID=Thaps8206;Parent=Thaps8206;rank=5 chr9 . CDS 1103374 1103456 . + 0 ID=Thaps8206;Parent=Thaps8206;rank=6 chr9 . CDS 1103549 1103635 . + 0 ID=Thaps8206;Parent=Thaps8206;rank=7 chr9 . CDS 1103727 1104098 . + 0 ID=Thaps8206;Parent=Thaps8206;rank=8 chr9 ensembl protein_coding_gene 1107661 1108993 . + . ID=Thaps24082;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q1];external_name=Thaps24082;logic_name=jgi_thaps3 chr9 ensembl transcript 1107661 1108993 . + . ID=Thaps24082;Parent=Thaps24082;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1107661 1108710 . + 0 ID=Thaps24082;Parent=Thaps24082;rank=1 chr9 . exon 1107661 1108710 . + . ID=Thaps24082.1;Parent=Thaps24082;constitutive=1;rank=1 chr9 . CDS 1108808 1108993 . + 0 ID=Thaps24082;Parent=Thaps24082;rank=2 chr9 . exon 1108808 1108993 . + . ID=Thaps24082.2;Parent=Thaps24082;constitutive=1;rank=2 chr9 ensembl protein_coding_gene 1105520 1106038 . + . ID=Thaps29375;biotype=protein_coding;description=Fucoxanthin chl a/c light-harvesting protein%2C lhcr type [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q0];external_name=LHCR1;logic_name=jgi_thaps3 chr9 ensembl transcript 1105520 1106038 . + . ID=Thaps29375;Parent=Thaps29375;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1105520 1106038 . + 0 ID=Thaps29375;Parent=Thaps29375;rank=1 chr9 . exon 1105520 1106038 . + . ID=Thaps29375.1;Parent=Thaps29375;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1109842 1110803 . + . ID=Thaps36249;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q2];external_name=Thaps36249;logic_name=jgi_thaps3 chr9 ensembl transcript 1109842 1110803 . + . ID=Thaps36249;Parent=Thaps36249;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1109842 1109943 . + 0 ID=Thaps36249;Parent=Thaps36249;rank=1 chr9 . exon 1109842 1109943 . + . ID=Thaps36249.1;Parent=Thaps36249;constitutive=1;rank=1 chr9 . CDS 1110045 1110291 . + 0 ID=Thaps36249;Parent=Thaps36249;rank=2 chr9 . exon 1110045 1110291 . + . ID=Thaps36249.2;Parent=Thaps36249;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1110544 1110803 . + 0 ID=Thaps36249;Parent=Thaps36249;rank=3 chr9 . exon 1110544 1110803 . + . ID=Thaps36249.3;Parent=Thaps36249;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . exon 1102098 1102148 . + . ID=Thaps8206.3;Parent=Thaps8206;constitutive=1;rank=3 chr9 . exon 1102252 1102871 . + . ID=Thaps8206.4;Parent=Thaps8206;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . exon 1103136 1103319 . + . ID=Thaps8206.5;Parent=Thaps8206;constitutive=1;ensembl_end_phase=1;rank=5 chr9 . exon 1103374 1103456 . + . ID=Thaps8206.6;Parent=Thaps8206;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . exon 1103549 1103635 . + . ID=Thaps8206.7;Parent=Thaps8206;constitutive=1;rank=7 chr9 . exon 1103727 1104098 . + . ID=Thaps8206.8;Parent=Thaps8206;constitutive=1;rank=8 chr9 . repeat_region 1116984 1117225 . + . description=Copia1LTR_TP chr9 . repeat_region 1117226 1121982 . + . description=Copia1I_TP chr9 . repeat_region 1120145 1120203 . ? . description=trf chr9 ensembl protein_coding_gene 1111981 1112493 . + . ID=Thaps18076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q3];external_name=Thaps18076;logic_name=jgi_thaps3 chr9 ensembl transcript 1111981 1112493 . + . ID=Thaps18076;Parent=Thaps18076;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1111981 1112344 . + 0 ID=Thaps18076;Parent=Thaps18076;rank=1 chr9 . exon 1111981 1112344 . + . ID=Thaps18076.1;Parent=Thaps18076;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 1112399 1112493 . + 0 ID=Thaps18076;Parent=Thaps18076;rank=2 chr9 . exon 1112399 1112493 . + . ID=Thaps18076.2;Parent=Thaps18076;constitutive=1;ensembl_end_phase=2;rank=2 chr9 ensembl protein_coding_gene 1113898 1116227 . + . ID=Thaps24084;biotype=protein_coding;description=T-complex protein 1 subunit delta [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q4];external_name=Thaps24084;logic_name=jgi_thaps3 chr9 ensembl transcript 1113898 1116227 . + . ID=Thaps24084;Parent=Thaps24084;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1113898 1113993 . + 0 ID=Thaps24084;Parent=Thaps24084;rank=1 chr9 . exon 1113898 1113993 . + . ID=Thaps24084.1;Parent=Thaps24084;constitutive=1;rank=1 chr9 . CDS 1114719 1116227 . + 0 ID=Thaps24084;Parent=Thaps24084;rank=2 chr9 . exon 1114719 1116227 . + . ID=Thaps24084.2;Parent=Thaps24084;constitutive=1;rank=2 chr9 ensembl gene 1118987 1119494 . + . ID=Thaps263605;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr9 ensembl transcript 1118987 1119494 . + . ID=Thaps263605;Parent=Thaps263605;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr9 . exon 1118987 1119165 . + . ID=Thaps263605.1;Parent=Thaps263605;constitutive=1;ensembl_end_phase=2;rank=1 chr9 . exon 1119186 1119494 . + . ID=Thaps263605.2;Parent=Thaps263605;constitutive=1;rank=2 chr9 . repeat_region 1124723 1124770 . ? . description=dust chr9 . repeat_region 1129878 1129888 . ? . description=dust chr9 ensembl protein_coding_gene 1127916 1130499 . - . ID=Thaps24087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q7];external_name=Thaps24087;logic_name=jgi_thaps3 chr9 ensembl transcript 1127916 1130499 . - . ID=Thaps24087;Parent=Thaps24087;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1127916 1129626 . - 0 ID=Thaps24087;Parent=Thaps24087;rank=3 chr9 . exon 1127916 1129626 . - . ID=Thaps24087.3;Parent=Thaps24087;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 1129758 1129802 . - 0 ID=Thaps24087;Parent=Thaps24087;rank=2 chr9 . exon 1129758 1129802 . - . ID=Thaps24087.2;Parent=Thaps24087;constitutive=1;rank=2 chr9 . CDS 1130144 1130499 . - 0 ID=Thaps24087;Parent=Thaps24087;rank=1 chr9 . exon 1130144 1130499 . - . ID=Thaps24087.1;Parent=Thaps24087;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 1123429 1124690 . + . ID=Thaps36203;biotype=protein_coding;description=Sterol 24-C-methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q5];external_name=SMT1;logic_name=jgi_thaps3 chr9 ensembl transcript 1123429 1124690 . + . ID=Thaps36203;Parent=Thaps36203;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1123429 1123648 . + 0 ID=Thaps36203;Parent=Thaps36203;rank=1 chr9 . exon 1123429 1123648 . + . ID=Thaps36203.1;Parent=Thaps36203;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 1123718 1124267 . + 0 ID=Thaps36203;Parent=Thaps36203;rank=2 chr9 . exon 1123718 1124267 . + . ID=Thaps36203.2;Parent=Thaps36203;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1124447 1124690 . + 0 ID=Thaps36203;Parent=Thaps36203;rank=3 chr9 . exon 1124447 1124690 . + . ID=Thaps36203.3;Parent=Thaps36203;constitutive=1;ensembl_end_phase=1;rank=3 chr9 ensembl protein_coding_gene 1126141 1127637 . + . ID=Thaps41778;biotype=protein_coding;description=Adenylosuccinate synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q6];external_name=PURA;logic_name=jgi_thaps3 chr9 ensembl transcript 1126141 1127637 . + . ID=Thaps41778;Parent=Thaps41778;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1126141 1126152 . + 0 ID=Thaps41778;Parent=Thaps41778;rank=1 chr9 . exon 1126141 1126152 . + . ID=Thaps41778.1;Parent=Thaps41778;constitutive=1;rank=1 chr9 . CDS 1126296 1127064 . + 0 ID=Thaps41778;Parent=Thaps41778;rank=2 chr9 . exon 1126296 1127064 . + . ID=Thaps41778.2;Parent=Thaps41778;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1127159 1127637 . + 0 ID=Thaps41778;Parent=Thaps41778;rank=3 chr9 . exon 1127159 1127637 . + . ID=Thaps41778.3;Parent=Thaps41778;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . repeat_region 1132627 1132669 . ? . description=trf chr9 . repeat_region 1133076 1133128 . ? . description=trf chr9 . repeat_region 1135477 1135498 . ? . description=trf chr9 . repeat_region 1141343 1141813 . ? . description=trf chr9 ensembl protein_coding_gene 1132448 1134302 . - . ID=Thaps8215;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q8];external_name=Thaps8215;logic_name=jgi_thaps3 chr9 ensembl transcript 1132448 1134302 . - . ID=Thaps8215;Parent=Thaps8215;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1132448 1133411 . - 0 ID=Thaps8215;Parent=Thaps8215;rank=3 chr9 . exon 1132448 1133411 . - . ID=Thaps8215.3;Parent=Thaps8215;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 1133551 1133637 . - 0 ID=Thaps8215;Parent=Thaps8215;rank=2 chr9 . exon 1133551 1133637 . - . ID=Thaps8215.2;Parent=Thaps8215;constitutive=1;rank=2 chr9 . CDS 1133803 1134302 . - 0 ID=Thaps8215;Parent=Thaps8215;rank=1 chr9 . exon 1133803 1134302 . - . ID=Thaps8215.1;Parent=Thaps8215;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 1135065 1136623 . - . ID=Thaps8216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8Q9];external_name=Thaps8216;logic_name=jgi_thaps3 chr9 ensembl transcript 1135065 1136623 . - . ID=Thaps8216;Parent=Thaps8216;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1135065 1135913 . - 0 ID=Thaps8216;Parent=Thaps8216;rank=5 chr9 . exon 1135065 1135913 . - . ID=Thaps8216.5;Parent=Thaps8216;constitutive=1;rank=5 chr9 . CDS 1135985 1136094 . - 0 ID=Thaps8216;Parent=Thaps8216;rank=4 chr9 . exon 1135985 1136094 . - . ID=Thaps8216.4;Parent=Thaps8216;constitutive=1;ensembl_end_phase=2;rank=4 chr9 . CDS 1136167 1136294 . - 0 ID=Thaps8216;Parent=Thaps8216;rank=3 chr9 . exon 1136167 1136294 . - . ID=Thaps8216.3;Parent=Thaps8216;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 1136382 1136409 . - 0 ID=Thaps8216;Parent=Thaps8216;rank=2 chr9 . exon 1136382 1136409 . - . ID=Thaps8216.2;Parent=Thaps8216;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1136524 1136623 . - 0 ID=Thaps8216;Parent=Thaps8216;rank=1 chr9 . exon 1136524 1136623 . - . ID=Thaps8216.1;Parent=Thaps8216;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 1139048 1143383 . + . ID=Thaps8217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R0];external_name=Thaps8217;logic_name=jgi_thaps3 chr9 ensembl transcript 1139048 1143383 . + . ID=Thaps8217;Parent=Thaps8217;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1139048 1140901 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=1 chr9 . exon 1139048 1140901 . + . ID=Thaps8217.1;Parent=Thaps8217;constitutive=1;rank=1 chr9 . CDS 1140994 1141104 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=2 chr9 . exon 1140994 1141104 . + . ID=Thaps8217.2;Parent=Thaps8217;constitutive=1;rank=2 chr9 . CDS 1141316 1141397 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=3 chr9 . exon 1141316 1141397 . + . ID=Thaps8217.3;Parent=Thaps8217;constitutive=1;ensembl_end_phase=1;rank=3 chr9 . CDS 1141438 1141551 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=4 chr9 . exon 1141438 1141551 . + . ID=Thaps8217.4;Parent=Thaps8217;constitutive=1;rank=4 chr9 . CDS 1141641 1141703 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=5 chr9 . CDS 1142099 1142155 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=6 chr9 . CDS 1142264 1142428 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=7 chr9 . CDS 1142511 1142766 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=8 chr9 . CDS 1142905 1143080 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=9 chr9 . CDS 1143160 1143383 . + 0 ID=Thaps8217;Parent=Thaps8217;rank=10 chr9 ensembl protein_coding_gene 1145758 1146898 . + . ID=Thaps41780;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R1];external_name=Thaps41780;logic_name=jgi_thaps3 chr9 ensembl transcript 1145758 1146898 . + . ID=Thaps41780;Parent=Thaps41780;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1145758 1146289 . + 0 ID=Thaps41780;Parent=Thaps41780;rank=1 chr9 . exon 1145758 1146289 . + . ID=Thaps41780.1;Parent=Thaps41780;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 1146384 1146898 . + 0 ID=Thaps41780;Parent=Thaps41780;rank=2 chr9 . exon 1146384 1146898 . + . ID=Thaps41780.2;Parent=Thaps41780;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . exon 1141641 1141703 . + . ID=Thaps8217.5;Parent=Thaps8217;constitutive=1;rank=5 chr9 . exon 1142099 1142155 . + . ID=Thaps8217.6;Parent=Thaps8217;constitutive=1;rank=6 chr9 . exon 1142264 1142428 . + . ID=Thaps8217.7;Parent=Thaps8217;constitutive=1;rank=7 chr9 . exon 1142511 1142766 . + . ID=Thaps8217.8;Parent=Thaps8217;constitutive=1;ensembl_end_phase=1;rank=8 chr9 . exon 1142905 1143080 . + . ID=Thaps8217.9;Parent=Thaps8217;constitutive=1;ensembl_end_phase=2;rank=9 chr9 . exon 1143160 1143383 . + . ID=Thaps8217.10;Parent=Thaps8217;constitutive=1;ensembl_end_phase=2;rank=10 chr9 ensembl protein_coding_gene 1147420 1152270 . + . ID=Thaps8219;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R2];external_name=Thaps8219;logic_name=jgi_thaps3 chr9 ensembl transcript 1147420 1152270 . + . ID=Thaps8219;Parent=Thaps8219;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1147420 1148595 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=1 chr9 . exon 1147420 1148595 . + . ID=Thaps8219.1;Parent=Thaps8219;constitutive=1;rank=1 chr9 . CDS 1148690 1149034 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=2 chr9 . exon 1148690 1149034 . + . ID=Thaps8219.2;Parent=Thaps8219;constitutive=1;rank=2 chr9 . CDS 1149137 1149310 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=3 chr9 . exon 1149137 1149310 . + . ID=Thaps8219.3;Parent=Thaps8219;constitutive=1;rank=3 chr9 . CDS 1149408 1149530 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=4 chr9 . exon 1149408 1149530 . + . ID=Thaps8219.4;Parent=Thaps8219;constitutive=1;rank=4 chr9 . CDS 1149624 1149718 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=5 chr9 . exon 1149624 1149718 . + . ID=Thaps8219.5;Parent=Thaps8219;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 1149800 1149851 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=6 chr9 . exon 1149800 1149851 . + . ID=Thaps8219.6;Parent=Thaps8219;constitutive=1;ensembl_end_phase=1;rank=6 chr9 . CDS 1149952 1150014 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=7 chr9 . exon 1149952 1150014 . + . ID=Thaps8219.7;Parent=Thaps8219;constitutive=1;rank=7 chr9 . CDS 1150096 1150186 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=8 chr9 . exon 1150096 1150186 . + . ID=Thaps8219.8;Parent=Thaps8219;constitutive=1;ensembl_end_phase=1;rank=8 chr9 . CDS 1150271 1150371 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=9 chr9 . exon 1150271 1150371 . + . ID=Thaps8219.9;Parent=Thaps8219;constitutive=1;ensembl_end_phase=2;rank=9 chr9 . CDS 1150466 1150558 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=10 chr9 . exon 1150466 1150558 . + . ID=Thaps8219.10;Parent=Thaps8219;constitutive=1;rank=10 chr9 . CDS 1150672 1150900 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=11 chr9 . exon 1150672 1150900 . + . ID=Thaps8219.11;Parent=Thaps8219;constitutive=1;ensembl_end_phase=1;rank=11 chr9 . CDS 1150984 1151053 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=12 chr9 . exon 1150984 1151053 . + . ID=Thaps8219.12;Parent=Thaps8219;constitutive=1;ensembl_end_phase=1;rank=12 chr9 . CDS 1151148 1151204 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=13 chr9 . exon 1151148 1151204 . + . ID=Thaps8219.13;Parent=Thaps8219;constitutive=1;rank=13 chr9 . CDS 1151312 1151368 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=14 chr9 . exon 1151312 1151368 . + . ID=Thaps8219.14;Parent=Thaps8219;constitutive=1;rank=14 chr9 . CDS 1151451 1151486 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=15 chr9 . CDS 1151571 1151667 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=16 chr9 . CDS 1151761 1151869 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=17 chr9 . CDS 1151951 1152270 . + 0 ID=Thaps8219;Parent=Thaps8219;rank=18 chr9 ensembl protein_coding_gene 1153227 1157476 . + . ID=Thaps24089;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R3];external_name=Thaps24089;logic_name=jgi_thaps3 chr9 ensembl transcript 1153227 1157476 . + . ID=Thaps24089;Parent=Thaps24089;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1153227 1156463 . + 0 ID=Thaps24089;Parent=Thaps24089;rank=1 chr9 . exon 1153227 1156463 . + . ID=Thaps24089.1;Parent=Thaps24089;constitutive=1;rank=1 chr9 . CDS 1156549 1156671 . + 0 ID=Thaps24089;Parent=Thaps24089;rank=2 chr9 . exon 1156549 1156671 . + . ID=Thaps24089.2;Parent=Thaps24089;constitutive=1;rank=2 chr9 . CDS 1156704 1157378 . + 0 ID=Thaps24089;Parent=Thaps24089;rank=3 chr9 . exon 1156704 1157378 . + . ID=Thaps24089.3;Parent=Thaps24089;constitutive=1;rank=3 chr9 . CDS 1157444 1157476 . + 0 ID=Thaps24089;Parent=Thaps24089;rank=4 chr9 . exon 1157444 1157476 . + . ID=Thaps24089.4;Parent=Thaps24089;constitutive=1;rank=4 chr9 . exon 1151451 1151486 . + . ID=Thaps8219.15;Parent=Thaps8219;constitutive=1;rank=15 chr9 . exon 1151571 1151667 . + . ID=Thaps8219.16;Parent=Thaps8219;constitutive=1;ensembl_end_phase=1;rank=16 chr9 . exon 1151761 1151869 . + . ID=Thaps8219.17;Parent=Thaps8219;constitutive=1;ensembl_end_phase=1;rank=17 chr9 . exon 1151951 1152270 . + . ID=Thaps8219.18;Parent=Thaps8219;constitutive=1;ensembl_end_phase=2;rank=18 chr9 ensembl protein_coding_gene 1158089 1159102 . + . ID=Thaps8221;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R4];external_name=Thaps8221;logic_name=jgi_thaps3 chr9 ensembl transcript 1158089 1159102 . + . ID=Thaps8221;Parent=Thaps8221;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1158089 1159102 . + 0 ID=Thaps8221;Parent=Thaps8221;rank=1 chr9 . exon 1158089 1159102 . + . ID=Thaps8221.1;Parent=Thaps8221;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1160425 1160940 . - . ID=Thaps8222;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R5];external_name=Thaps8222;logic_name=jgi_thaps3 chr9 ensembl transcript 1160425 1160940 . - . ID=Thaps8222;Parent=Thaps8222;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1160425 1160940 . - 0 ID=Thaps8222;Parent=Thaps8222;rank=1 chr9 . exon 1160425 1160940 . - . ID=Thaps8222.1;Parent=Thaps8222;constitutive=1;rank=1 chr9 . repeat_region 1168709 1169056 . + . description=TE1A_TP chr9 . repeat_region 1171155 1171175 . ? . description=trf chr9 ensembl protein_coding_gene 1163760 1166306 . - . ID=Thaps24090;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R7];external_name=Thaps24090;logic_name=jgi_thaps3 chr9 ensembl transcript 1163760 1166306 . - . ID=Thaps24090;Parent=Thaps24090;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1163760 1166306 . - 0 ID=Thaps24090;Parent=Thaps24090;rank=1 chr9 . exon 1163760 1166306 . - . ID=Thaps24090.1;Parent=Thaps24090;constitutive=1;rank=1 chr9 ensembl protein_coding_gene 1169257 1173183 . + . ID=Thaps24091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R8];external_name=Thaps24091;logic_name=jgi_thaps3 chr9 ensembl transcript 1169257 1173183 . + . ID=Thaps24091;Parent=Thaps24091;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1169257 1169343 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=1 chr9 . exon 1169257 1169343 . + . ID=Thaps24091.1;Parent=Thaps24091;constitutive=1;rank=1 chr9 . CDS 1169557 1170091 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=2 chr9 . exon 1169557 1170091 . + . ID=Thaps24091.2;Parent=Thaps24091;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1170254 1170342 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=3 chr9 . exon 1170254 1170342 . + . ID=Thaps24091.3;Parent=Thaps24091;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 1170446 1170653 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=4 chr9 . exon 1170446 1170653 . + . ID=Thaps24091.4;Parent=Thaps24091;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 1170787 1171388 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=5 chr9 . exon 1170787 1171388 . + . ID=Thaps24091.5;Parent=Thaps24091;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 1171467 1171937 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=6 chr9 . CDS 1172013 1172097 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=7 chr9 . CDS 1172174 1172550 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=8 chr9 . CDS 1172745 1172877 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=9 chr9 . CDS 1172973 1173071 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=10 chr9 . CDS 1173092 1173183 . + 0 ID=Thaps24091;Parent=Thaps24091;rank=11 chr9 ensembl protein_coding_gene 1161636 1162223 . + . ID=Thaps8223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R6];external_name=Thaps8223;logic_name=jgi_thaps3 chr9 ensembl transcript 1161636 1162223 . + . ID=Thaps8223;Parent=Thaps8223;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1161636 1162223 . + 0 ID=Thaps8223;Parent=Thaps8223;rank=1 chr9 . exon 1161636 1162223 . + . ID=Thaps8223.1;Parent=Thaps8223;constitutive=1;rank=1 chr9 . repeat_region 1175104 1175205 . - . description=Harbinger2N_TP chr9 . repeat_region 1178757 1178766 . ? . description=dust chr9 . exon 1171467 1171937 . + . ID=Thaps24091.6;Parent=Thaps24091;constitutive=1;rank=6 chr9 . exon 1172013 1172097 . + . ID=Thaps24091.7;Parent=Thaps24091;constitutive=1;ensembl_end_phase=1;rank=7 chr9 . exon 1172174 1172550 . + . ID=Thaps24091.8;Parent=Thaps24091;constitutive=1;ensembl_end_phase=2;rank=8 chr9 . exon 1172745 1172877 . + . ID=Thaps24091.9;Parent=Thaps24091;constitutive=1;ensembl_end_phase=1;rank=9 chr9 . exon 1172973 1173071 . + . ID=Thaps24091.10;Parent=Thaps24091;constitutive=1;rank=10 chr9 . exon 1173092 1173183 . + . ID=Thaps24091.11;Parent=Thaps24091;constitutive=1;ensembl_end_phase=2;rank=11 chr9 ensembl protein_coding_gene 1173834 1174365 . - . ID=Thaps8226;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8R9];external_name=Thaps8226;logic_name=jgi_thaps3 chr9 ensembl transcript 1173834 1174365 . - . ID=Thaps8226;Parent=Thaps8226;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1173834 1174011 . - 0 ID=Thaps8226;Parent=Thaps8226;rank=2 chr9 . exon 1173834 1174011 . - . ID=Thaps8226.2;Parent=Thaps8226;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1174169 1174365 . - 0 ID=Thaps8226;Parent=Thaps8226;rank=1 chr9 . exon 1174169 1174365 . - . ID=Thaps8226.1;Parent=Thaps8226;constitutive=1;ensembl_end_phase=2;rank=1 chr9 ensembl protein_coding_gene 1175259 1176773 . + . ID=Thaps8227;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S0];external_name=Thaps8227;logic_name=jgi_thaps3 chr9 ensembl transcript 1175259 1176773 . + . ID=Thaps8227;Parent=Thaps8227;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1175259 1175412 . + 0 ID=Thaps8227;Parent=Thaps8227;rank=1 chr9 . exon 1175259 1175412 . + . ID=Thaps8227.1;Parent=Thaps8227;constitutive=1;ensembl_end_phase=1;rank=1 chr9 . CDS 1175498 1176143 . + 0 ID=Thaps8227;Parent=Thaps8227;rank=2 chr9 . exon 1175498 1176143 . + . ID=Thaps8227.2;Parent=Thaps8227;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1176278 1176773 . + 0 ID=Thaps8227;Parent=Thaps8227;rank=3 chr9 . exon 1176278 1176773 . + . ID=Thaps8227.3;Parent=Thaps8227;constitutive=1;ensembl_end_phase=1;rank=3 chr9 ensembl protein_coding_gene 1177461 1180388 . + . ID=Thaps8228;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S1];external_name=Thaps8228;logic_name=jgi_thaps3 chr9 ensembl transcript 1177461 1180388 . + . ID=Thaps8228;Parent=Thaps8228;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1177461 1177526 . + 0 ID=Thaps8228;Parent=Thaps8228;rank=1 chr9 . exon 1177461 1177526 . + . ID=Thaps8228.1;Parent=Thaps8228;constitutive=1;rank=1 chr9 . CDS 1177609 1178701 . + 0 ID=Thaps8228;Parent=Thaps8228;rank=2 chr9 . exon 1177609 1178701 . + . ID=Thaps8228.2;Parent=Thaps8228;constitutive=1;ensembl_end_phase=1;rank=2 chr9 . CDS 1178772 1178945 . + 0 ID=Thaps8228;Parent=Thaps8228;rank=3 chr9 . exon 1178772 1178945 . + . ID=Thaps8228.3;Parent=Thaps8228;constitutive=1;rank=3 chr9 . CDS 1179027 1179126 . + 0 ID=Thaps8228;Parent=Thaps8228;rank=4 chr9 . exon 1179027 1179126 . + . ID=Thaps8228.4;Parent=Thaps8228;constitutive=1;ensembl_end_phase=1;rank=4 chr9 . CDS 1179201 1179229 . + 0 ID=Thaps8228;Parent=Thaps8228;rank=5 chr9 . exon 1179201 1179229 . + . ID=Thaps8228.5;Parent=Thaps8228;constitutive=1;ensembl_end_phase=2;rank=5 chr9 . CDS 1179317 1179354 . + 0 ID=Thaps8228;Parent=Thaps8228;rank=6 chr9 . exon 1179317 1179354 . + . ID=Thaps8228.6;Parent=Thaps8228;constitutive=1;ensembl_end_phase=2;rank=6 chr9 . CDS 1179432 1180388 . + 0 ID=Thaps8228;Parent=Thaps8228;rank=7 chr9 . exon 1179432 1180388 . + . ID=Thaps8228.7;Parent=Thaps8228;constitutive=1;rank=7 chr9 . repeat_region 1181687 1181723 . ? . description=trf chr9 . repeat_region 1190696 1190796 . ? . description=trf chr9 . repeat_region 1190855 1190992 . ? . description=trf chr9 . repeat_region 1190887 1191008 . ? . description=trf chr9 . repeat_region 1191001 1191057 . ? . description=trf chr9 ensembl protein_coding_gene 1185252 1188372 . - . ID=Thaps263610;biotype=protein_coding;external_name=Thaps263610;logic_name=jgi_thaps3 chr9 ensembl transcript 1185252 1188372 . - . ID=Thaps263610;Parent=Thaps263610;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1185252 1186112 . - 0 ID=Thaps263610;Parent=Thaps263610;rank=4 chr9 . exon 1185252 1186112 . - . ID=Thaps263610.4;Parent=Thaps263610;constitutive=1;rank=4 chr9 . CDS 1186191 1186435 . - 0 ID=Thaps263610;Parent=Thaps263610;rank=3 chr9 . exon 1186191 1186435 . - . ID=Thaps263610.3;Parent=Thaps263610;constitutive=1;ensembl_end_phase=2;rank=3 chr9 . CDS 1186501 1187897 . - 0 ID=Thaps263610;Parent=Thaps263610;rank=2 chr9 . exon 1186501 1187897 . - . ID=Thaps263610.2;Parent=Thaps263610;constitutive=1;ensembl_end_phase=2;rank=2 chr9 . CDS 1187958 1188372 . - 0 ID=Thaps263610;Parent=Thaps263610;rank=1 chr9 . exon 1187958 1188372 . - . ID=Thaps263610.1;Parent=Thaps263610;constitutive=1;ensembl_end_phase=1;rank=1 chr9 ensembl protein_coding_gene 1184297 1184623 . + . ID=Thaps36107;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C8S2];external_name=Thaps36107;logic_name=jgi_thaps3 chr9 ensembl transcript 1184297 1184623 . + . ID=Thaps36107;Parent=Thaps36107;biotype=protein_coding;logic_name=jgi_thaps3 chr9 . CDS 1184297 1184623 . + 0 ID=Thaps36107;Parent=Thaps36107;rank=1 chr9 . exon 1184297 1184623 . + . ID=Thaps36107.1;Parent=Thaps36107;constitutive=1;rank=1 ##gff-version 3 ##sequence-region 8 1 1267198 chr8 . repeat_region 1 696 . ? . description=trf chr8 . repeat_region 1 696 . ? . description=dust chr8 . repeat_region 4656 4909 . - . description=TE2c_TP chr8 . repeat_region 4922 5459 . - . description=Harbinger2N_TP chr8 . repeat_region 5002 5214 . ? . description=dust chr8 . repeat_region 5003 5126 . ? . description=trf chr8 . repeat_region 5018 5131 . ? . description=trf chr8 . repeat_region 5120 5222 . ? . description=trf chr8 . repeat_region 5460 5795 . + . description=Harbinger4_TP chr8 . repeat_region 9243 9250 . ? . description=dust chr8 ensembl protein_coding_gene 791 1781 . - . ID=Thaps17811;biotype=protein_coding;external_name=Thaps17811;logic_name=jgi_thaps3 chr8 ensembl transcript 791 1781 . - . ID=Thaps17811;Parent=Thaps17811;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 791 845 . - 0 ID=Thaps17811;Parent=Thaps17811;rank=3 chr8 . exon 791 845 . - . ID=Thaps17811.3;Parent=Thaps17811;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 941 1428 . - 0 ID=Thaps17811;Parent=Thaps17811;rank=2 chr8 . exon 941 1428 . - . ID=Thaps17811.2;Parent=Thaps17811;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1545 1781 . - 0 ID=Thaps17811;Parent=Thaps17811;rank=1 chr8 . exon 1545 1781 . - . ID=Thaps17811.1;Parent=Thaps17811;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 7459 11497 . + . ID=Thaps35968;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C699];external_name=Thaps35968;logic_name=jgi_thaps3 chr8 ensembl transcript 7459 11497 . + . ID=Thaps35968;Parent=Thaps35968;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 7459 7780 . + 0 ID=Thaps35968;Parent=Thaps35968;rank=1 chr8 . exon 7459 7780 . + . ID=Thaps35968.1;Parent=Thaps35968;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 7934 8041 . + 0 ID=Thaps35968;Parent=Thaps35968;rank=2 chr8 . exon 7934 8041 . + . ID=Thaps35968.2;Parent=Thaps35968;constitutive=1;rank=2 chr8 . CDS 8432 8840 . + 0 ID=Thaps35968;Parent=Thaps35968;rank=3 chr8 . exon 8432 8840 . + . ID=Thaps35968.3;Parent=Thaps35968;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 8946 9205 . + 0 ID=Thaps35968;Parent=Thaps35968;rank=4 chr8 . exon 8946 9205 . + . ID=Thaps35968.4;Parent=Thaps35968;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 9314 9598 . + 0 ID=Thaps35968;Parent=Thaps35968;rank=5 chr8 . exon 9314 9598 . + . ID=Thaps35968.5;Parent=Thaps35968;constitutive=1;rank=5 chr8 . CDS 9683 9853 . + 0 ID=Thaps35968;Parent=Thaps35968;rank=6 chr8 . exon 9683 9853 . + . ID=Thaps35968.6;Parent=Thaps35968;constitutive=1;rank=6 chr8 . CDS 9945 10174 . + 0 ID=Thaps35968;Parent=Thaps35968;rank=7 chr8 . exon 9945 10174 . + . ID=Thaps35968.7;Parent=Thaps35968;constitutive=1;ensembl_end_phase=2;rank=7 chr8 . CDS 11453 11497 . + 0 ID=Thaps35968;Parent=Thaps35968;rank=8 chr8 ensembl protein_coding_gene 2392 3920 . + . ID=Thaps7341;biotype=protein_coding;description=Triose or hexose phosphate/phosphate translocator [Source:UniProtKB/TrEMBL%3BAcc:B8C698];external_name=TPT2;logic_name=jgi_thaps3 chr8 ensembl transcript 2392 3920 . + . ID=Thaps7341;Parent=Thaps7341;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 2392 2712 . + 0 ID=Thaps7341;Parent=Thaps7341;rank=1 chr8 . exon 2392 2712 . + . ID=Thaps7341.1;Parent=Thaps7341;constitutive=1;rank=1 chr8 . CDS 2811 2851 . + 0 ID=Thaps7341;Parent=Thaps7341;rank=2 chr8 . exon 2811 2851 . + . ID=Thaps7341.2;Parent=Thaps7341;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 2930 3114 . + 0 ID=Thaps7341;Parent=Thaps7341;rank=3 chr8 . exon 2930 3114 . + . ID=Thaps7341.3;Parent=Thaps7341;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 3268 3920 . + 0 ID=Thaps7341;Parent=Thaps7341;rank=4 chr8 . exon 3268 3920 . + . ID=Thaps7341.4;Parent=Thaps7341;constitutive=1;ensembl_end_phase=2;rank=4 chr8 ensembl protein_coding_gene 18976 20318 . - . ID=Thaps23648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6A2];external_name=Thaps23648;logic_name=jgi_thaps3 chr8 ensembl transcript 18976 20318 . - . ID=Thaps23648;Parent=Thaps23648;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 18976 19175 . - 0 ID=Thaps23648;Parent=Thaps23648;rank=4 chr8 . exon 18976 19175 . - . ID=Thaps23648.4;Parent=Thaps23648;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 19273 19312 . - 0 ID=Thaps23648;Parent=Thaps23648;rank=3 chr8 . exon 19273 19312 . - . ID=Thaps23648.3;Parent=Thaps23648;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 19489 20050 . - 0 ID=Thaps23648;Parent=Thaps23648;rank=2 chr8 . exon 19489 20050 . - . ID=Thaps23648.2;Parent=Thaps23648;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 20266 20318 . - 0 ID=Thaps23648;Parent=Thaps23648;rank=1 chr8 ensembl protein_coding_gene 17027 18696 . + . ID=Thaps263327;biotype=protein_coding;description=MFS transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C6A1];external_name=Thaps263327;logic_name=jgi_thaps3 chr8 ensembl transcript 17027 18696 . + . ID=Thaps263327;Parent=Thaps263327;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 17027 17077 . + 0 ID=Thaps263327;Parent=Thaps263327;rank=1 chr8 . exon 17027 17077 . + . ID=Thaps263327.1;Parent=Thaps263327;constitutive=1;rank=1 chr8 . CDS 17152 17435 . + 0 ID=Thaps263327;Parent=Thaps263327;rank=2 chr8 . exon 17152 17435 . + . ID=Thaps263327.2;Parent=Thaps263327;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 17539 17546 . + 0 ID=Thaps263327;Parent=Thaps263327;rank=3 chr8 . exon 17539 17546 . + . ID=Thaps263327.3;Parent=Thaps263327;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 17619 17720 . + 0 ID=Thaps263327;Parent=Thaps263327;rank=4 chr8 . exon 17619 17720 . + . ID=Thaps263327.4;Parent=Thaps263327;constitutive=1;rank=4 chr8 . CDS 17748 18382 . + 0 ID=Thaps263327;Parent=Thaps263327;rank=5 chr8 . exon 17748 18382 . + . ID=Thaps263327.5;Parent=Thaps263327;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . CDS 18475 18696 . + 0 ID=Thaps263327;Parent=Thaps263327;rank=6 chr8 . exon 18475 18696 . + . ID=Thaps263327.6;Parent=Thaps263327;constitutive=1;rank=6 chr8 . exon 11453 11497 . + . ID=Thaps35968.8;Parent=Thaps35968;constitutive=1;rank=8 chr8 ensembl protein_coding_gene 11842 13118 . + . ID=Thaps7343;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6A0];external_name=Thaps7343;logic_name=jgi_thaps3 chr8 ensembl transcript 11842 13118 . + . ID=Thaps7343;Parent=Thaps7343;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 11842 12147 . + 0 ID=Thaps7343;Parent=Thaps7343;rank=1 chr8 . exon 11842 12147 . + . ID=Thaps7343.1;Parent=Thaps7343;constitutive=1;rank=1 chr8 . CDS 12267 13118 . + 0 ID=Thaps7343;Parent=Thaps7343;rank=2 chr8 . exon 12267 13118 . + . ID=Thaps7343.2;Parent=Thaps7343;constitutive=1;rank=2 chr8 . exon 20266 20318 . - . ID=Thaps23648.1;Parent=Thaps23648;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 20667 21725 . + . ID=Thaps23649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6A3];external_name=Thaps23649;logic_name=jgi_thaps3 chr8 ensembl transcript 20667 21725 . + . ID=Thaps23649;Parent=Thaps23649;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 20667 21725 . + 0 ID=Thaps23649;Parent=Thaps23649;rank=1 chr8 . exon 20667 21725 . + . ID=Thaps23649.1;Parent=Thaps23649;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 22298 27350 . + . ID=Thaps23650;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6A4];external_name=Thaps23650;logic_name=jgi_thaps3 chr8 ensembl transcript 22298 27350 . + . ID=Thaps23650;Parent=Thaps23650;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 22298 22390 . + 0 ID=Thaps23650;Parent=Thaps23650;rank=1 chr8 . exon 22298 22390 . + . ID=Thaps23650.1;Parent=Thaps23650;constitutive=1;rank=1 chr8 . CDS 22803 23418 . + 0 ID=Thaps23650;Parent=Thaps23650;rank=2 chr8 . exon 22803 23418 . + . ID=Thaps23650.2;Parent=Thaps23650;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 23506 24392 . + 0 ID=Thaps23650;Parent=Thaps23650;rank=3 chr8 . exon 23506 24392 . + . ID=Thaps23650.3;Parent=Thaps23650;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 24489 27350 . + 0 ID=Thaps23650;Parent=Thaps23650;rank=4 chr8 . exon 24489 27350 . + . ID=Thaps23650.4;Parent=Thaps23650;constitutive=1;rank=4 chr8 ensembl protein_coding_gene 27504 29877 . - . ID=Thaps23651;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6A5];external_name=Thaps23651;logic_name=jgi_thaps3 chr8 ensembl transcript 27504 29877 . - . ID=Thaps23651;Parent=Thaps23651;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 27504 28631 . - 0 ID=Thaps23651;Parent=Thaps23651;rank=6 chr8 . exon 27504 28631 . - . ID=Thaps23651.6;Parent=Thaps23651;constitutive=1;rank=6 chr8 . CDS 28702 28896 . - 0 ID=Thaps23651;Parent=Thaps23651;rank=5 chr8 . exon 28702 28896 . - . ID=Thaps23651.5;Parent=Thaps23651;constitutive=1;rank=5 chr8 . CDS 29061 29261 . - 0 ID=Thaps23651;Parent=Thaps23651;rank=4 chr8 . exon 29061 29261 . - . ID=Thaps23651.4;Parent=Thaps23651;constitutive=1;rank=4 chr8 . CDS 29339 29368 . - 0 ID=Thaps23651;Parent=Thaps23651;rank=3 chr8 . exon 29339 29368 . - . ID=Thaps23651.3;Parent=Thaps23651;constitutive=1;rank=3 chr8 . CDS 29473 29559 . - 0 ID=Thaps23651;Parent=Thaps23651;rank=2 chr8 . exon 29473 29559 . - . ID=Thaps23651.2;Parent=Thaps23651;constitutive=1;rank=2 chr8 . CDS 29665 29877 . - 0 ID=Thaps23651;Parent=Thaps23651;rank=1 chr8 . exon 29665 29877 . - . ID=Thaps23651.1;Parent=Thaps23651;constitutive=1;rank=1 chr8 . repeat_region 37692 38749 . ? . description=trf chr8 ensembl protein_coding_gene 31010 33918 . - . ID=Thaps13064;biotype=protein_coding;description=Glutamate-cysteine ligase [Source:UniProtKB/TrEMBL%3BAcc:B8C6A7];external_name=Thaps13064;logic_name=jgi_thaps3 chr8 ensembl transcript 31010 33918 . - . ID=Thaps13064;Parent=Thaps13064;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 31010 31284 . - 0 ID=Thaps13064;Parent=Thaps13064;rank=5 chr8 . exon 31010 31284 . - . ID=Thaps13064.5;Parent=Thaps13064;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . CDS 31385 31489 . - 0 ID=Thaps13064;Parent=Thaps13064;rank=4 chr8 . exon 31385 31489 . - . ID=Thaps13064.4;Parent=Thaps13064;constitutive=1;rank=4 chr8 . CDS 31685 31941 . - 0 ID=Thaps13064;Parent=Thaps13064;rank=3 chr8 . exon 31685 31941 . - . ID=Thaps13064.3;Parent=Thaps13064;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 32027 32634 . - 0 ID=Thaps13064;Parent=Thaps13064;rank=2 chr8 . exon 32027 32634 . - . ID=Thaps13064.2;Parent=Thaps13064;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 33256 33918 . - 0 ID=Thaps13064;Parent=Thaps13064;rank=1 chr8 . exon 33256 33918 . - . ID=Thaps13064.1;Parent=Thaps13064;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 30269 30748 . + . ID=Thaps7349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6A6];external_name=Thaps7349;logic_name=jgi_thaps3 chr8 ensembl transcript 30269 30748 . + . ID=Thaps7349;Parent=Thaps7349;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 30269 30472 . + 0 ID=Thaps7349;Parent=Thaps7349;rank=1 chr8 . exon 30269 30472 . + . ID=Thaps7349.1;Parent=Thaps7349;constitutive=1;rank=1 chr8 . CDS 30554 30748 . + 0 ID=Thaps7349;Parent=Thaps7349;rank=2 chr8 . exon 30554 30748 . + . ID=Thaps7349.2;Parent=Thaps7349;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 36550 39306 . + . ID=Thaps7351;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6A8];external_name=Thaps7351;logic_name=jgi_thaps3 chr8 ensembl transcript 36550 39306 . + . ID=Thaps7351;Parent=Thaps7351;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 36550 39306 . + 0 ID=Thaps7351;Parent=Thaps7351;rank=1 chr8 . exon 36550 39306 . + . ID=Thaps7351.1;Parent=Thaps7351;constitutive=1;rank=1 chr8 . repeat_region 41258 41283 . ? . description=dust chr8 ensembl protein_coding_gene 42599 43483 . + . ID=Thaps23653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6A9];external_name=Thaps23653;logic_name=jgi_thaps3 chr8 ensembl transcript 42599 43483 . + . ID=Thaps23653;Parent=Thaps23653;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 42599 43483 . + 0 ID=Thaps23653;Parent=Thaps23653;rank=1 chr8 . exon 42599 43483 . + . ID=Thaps23653.1;Parent=Thaps23653;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 45581 47703 . - . ID=Thaps23654;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6B1];external_name=Thaps23654;logic_name=jgi_thaps3 chr8 ensembl transcript 45581 47703 . - . ID=Thaps23654;Parent=Thaps23654;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 45581 45966 . - 0 ID=Thaps23654;Parent=Thaps23654;rank=4 chr8 . exon 45581 45966 . - . ID=Thaps23654.4;Parent=Thaps23654;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 46015 46880 . - 0 ID=Thaps23654;Parent=Thaps23654;rank=3 chr8 . exon 46015 46880 . - . ID=Thaps23654.3;Parent=Thaps23654;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 46991 47318 . - 0 ID=Thaps23654;Parent=Thaps23654;rank=2 chr8 . exon 46991 47318 . - . ID=Thaps23654.2;Parent=Thaps23654;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 47523 47703 . - 0 ID=Thaps23654;Parent=Thaps23654;rank=1 chr8 . exon 47523 47703 . - . ID=Thaps23654.1;Parent=Thaps23654;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 43551 44451 . - . ID=Thaps7353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6B0];external_name=Thaps7353;logic_name=jgi_thaps3 chr8 ensembl transcript 43551 44451 . - . ID=Thaps7353;Parent=Thaps7353;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 43551 44242 . - 0 ID=Thaps7353;Parent=Thaps7353;rank=2 chr8 . exon 43551 44242 . - . ID=Thaps7353.2;Parent=Thaps7353;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 44349 44451 . - 0 ID=Thaps7353;Parent=Thaps7353;rank=1 chr8 . exon 44349 44451 . - . ID=Thaps7353.1;Parent=Thaps7353;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 48550 48969 . - . ID=Thaps7355;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6B2];external_name=Thaps7355;logic_name=jgi_thaps3 chr8 ensembl transcript 48550 48969 . - . ID=Thaps7355;Parent=Thaps7355;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 48550 48969 . - 0 ID=Thaps7355;Parent=Thaps7355;rank=1 chr8 . exon 48550 48969 . - . ID=Thaps7355.1;Parent=Thaps7355;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 49857 51103 . + . ID=Thaps7356;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6B3];external_name=Thaps7356;logic_name=jgi_thaps3 chr8 ensembl transcript 49857 51103 . + . ID=Thaps7356;Parent=Thaps7356;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 49857 50454 . + 0 ID=Thaps7356;Parent=Thaps7356;rank=1 chr8 . exon 49857 50454 . + . ID=Thaps7356.1;Parent=Thaps7356;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 50604 51103 . + 0 ID=Thaps7356;Parent=Thaps7356;rank=2 chr8 . repeat_region 51395 51420 . ? . description=trf chr8 . repeat_region 51940 51984 . ? . description=trf chr8 ensembl protein_coding_gene 51459 52506 . - . ID=Thaps23655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6B4];external_name=Thaps23655;logic_name=jgi_thaps3 chr8 ensembl transcript 51459 52506 . - . ID=Thaps23655;Parent=Thaps23655;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 51459 51632 . - 0 ID=Thaps23655;Parent=Thaps23655;rank=2 chr8 . exon 51459 51632 . - . ID=Thaps23655.2;Parent=Thaps23655;constitutive=1;rank=2 chr8 . CDS 51757 52506 . - 0 ID=Thaps23655;Parent=Thaps23655;rank=1 chr8 . exon 51757 52506 . - . ID=Thaps23655.1;Parent=Thaps23655;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 53318 54852 . + . ID=Thaps23656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6B5];external_name=Thaps23656;logic_name=jgi_thaps3 chr8 ensembl transcript 53318 54852 . + . ID=Thaps23656;Parent=Thaps23656;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 53318 53456 . + 0 ID=Thaps23656;Parent=Thaps23656;rank=1 chr8 . exon 53318 53456 . + . ID=Thaps23656.1;Parent=Thaps23656;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 53569 53875 . + 0 ID=Thaps23656;Parent=Thaps23656;rank=2 chr8 . exon 53569 53875 . + . ID=Thaps23656.2;Parent=Thaps23656;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 53979 54852 . + 0 ID=Thaps23656;Parent=Thaps23656;rank=3 chr8 . exon 53979 54852 . + . ID=Thaps23656.3;Parent=Thaps23656;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 59344 59808 . - . ID=Thaps23657;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6B7];external_name=Thaps23657;logic_name=jgi_thaps3 chr8 ensembl transcript 59344 59808 . - . ID=Thaps23657;Parent=Thaps23657;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 59344 59808 . - 0 ID=Thaps23657;Parent=Thaps23657;rank=1 chr8 . exon 59344 59808 . - . ID=Thaps23657.1;Parent=Thaps23657;constitutive=1;rank=1 chr8 . exon 50604 51103 . + . ID=Thaps7356.2;Parent=Thaps7356;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 55624 57171 . + . ID=Thaps7359;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6B6];external_name=Thaps7359;logic_name=jgi_thaps3 chr8 ensembl transcript 55624 57171 . + . ID=Thaps7359;Parent=Thaps7359;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 55624 55804 . + 0 ID=Thaps7359;Parent=Thaps7359;rank=1 chr8 . exon 55624 55804 . + . ID=Thaps7359.1;Parent=Thaps7359;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 56001 56328 . + 0 ID=Thaps7359;Parent=Thaps7359;rank=2 chr8 . exon 56001 56328 . + . ID=Thaps7359.2;Parent=Thaps7359;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 56439 57171 . + 0 ID=Thaps7359;Parent=Thaps7359;rank=3 chr8 . exon 56439 57171 . + . ID=Thaps7359.3;Parent=Thaps7359;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . repeat_region 60335 60342 . ? . description=dust chr8 . repeat_region 60502 60564 . ? . description=dust chr8 . repeat_region 60621 60643 . ? . description=dust chr8 . repeat_region 66081 66088 . ? . description=dust chr8 ensembl protein_coding_gene 60040 61309 . + . ID=Thaps23658;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6B8];external_name=Thaps23658;logic_name=jgi_thaps3 chr8 ensembl transcript 60040 61309 . + . ID=Thaps23658;Parent=Thaps23658;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 60040 60746 . + 0 ID=Thaps23658;Parent=Thaps23658;rank=1 chr8 . exon 60040 60746 . + . ID=Thaps23658.1;Parent=Thaps23658;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 60865 61309 . + 0 ID=Thaps23658;Parent=Thaps23658;rank=2 chr8 . exon 60865 61309 . + . ID=Thaps23658.2;Parent=Thaps23658;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 64316 66367 . - . ID=Thaps23660;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6C1];external_name=Thaps23660;logic_name=jgi_thaps3 chr8 ensembl transcript 64316 66367 . - . ID=Thaps23660;Parent=Thaps23660;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 64316 66367 . - 0 ID=Thaps23660;Parent=Thaps23660;rank=1 chr8 . exon 64316 66367 . - . ID=Thaps23660.1;Parent=Thaps23660;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 61628 62791 . - . ID=Thaps269320;biotype=protein_coding;description=Dtdp-glucose 4%2C6-dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8C6B9];external_name=DGD2;logic_name=jgi_thaps3 chr8 ensembl transcript 61628 62791 . - . ID=Thaps269320;Parent=Thaps269320;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 61628 62791 . - 0 ID=Thaps269320;Parent=Thaps269320;rank=1 chr8 . exon 61628 62791 . - . ID=Thaps269320.1;Parent=Thaps269320;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 63308 64228 . + . ID=Thaps7363;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6C0];external_name=Thaps7363;logic_name=jgi_thaps3 chr8 ensembl transcript 63308 64228 . + . ID=Thaps7363;Parent=Thaps7363;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 63308 64228 . + 0 ID=Thaps7363;Parent=Thaps7363;rank=1 chr8 . exon 63308 64228 . + . ID=Thaps7363.1;Parent=Thaps7363;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 67076 68692 . + . ID=Thaps7365;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6C2];external_name=Thaps7365;logic_name=jgi_thaps3 chr8 ensembl transcript 67076 68692 . + . ID=Thaps7365;Parent=Thaps7365;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 67076 68692 . + 0 ID=Thaps7365;Parent=Thaps7365;rank=1 chr8 . exon 67076 68692 . + . ID=Thaps7365.1;Parent=Thaps7365;constitutive=1;rank=1 chr8 . repeat_region 75584 75609 . ? . description=trf chr8 . repeat_region 75898 75922 . ? . description=trf chr8 ensembl protein_coding_gene 76367 78520 . + . ID=Thaps269322;biotype=protein_coding;description=ATP synthase subunit alpha [Source:UniProtKB/TrEMBL%3BAcc:B8C6C6];external_name=ATPA;logic_name=jgi_thaps3 chr8 ensembl transcript 76367 78520 . + . ID=Thaps269322;Parent=Thaps269322;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 76367 76426 . + 0 ID=Thaps269322;Parent=Thaps269322;rank=1 chr8 . exon 76367 76426 . + . ID=Thaps269322.1;Parent=Thaps269322;constitutive=1;rank=1 chr8 . CDS 76952 78520 . + 0 ID=Thaps269322;Parent=Thaps269322;rank=2 chr8 . exon 76952 78520 . + . ID=Thaps269322.2;Parent=Thaps269322;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 70544 71146 . + . ID=Thaps7366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6C3];external_name=Thaps7366;logic_name=jgi_thaps3 chr8 ensembl transcript 70544 71146 . + . ID=Thaps7366;Parent=Thaps7366;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 70544 71146 . + 0 ID=Thaps7366;Parent=Thaps7366;rank=1 chr8 . exon 70544 71146 . + . ID=Thaps7366.1;Parent=Thaps7366;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 72923 73414 . + . ID=Thaps7367;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6C4];external_name=Thaps7367;logic_name=jgi_thaps3 chr8 ensembl transcript 72923 73414 . + . ID=Thaps7367;Parent=Thaps7367;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 72923 73414 . + 0 ID=Thaps7367;Parent=Thaps7367;rank=1 chr8 . exon 72923 73414 . + . ID=Thaps7367.1;Parent=Thaps7367;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 74126 75583 . - . ID=Thaps7368;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6C5];external_name=Thaps7368;logic_name=jgi_thaps3 chr8 ensembl transcript 74126 75583 . - . ID=Thaps7368;Parent=Thaps7368;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 74126 75583 . - 0 ID=Thaps7368;Parent=Thaps7368;rank=1 chr8 . exon 74126 75583 . - . ID=Thaps7368.1;Parent=Thaps7368;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 78829 79986 . - . ID=Thaps7370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6C7];external_name=Thaps7370;logic_name=jgi_thaps3 chr8 ensembl transcript 78829 79986 . - . ID=Thaps7370;Parent=Thaps7370;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 78829 79986 . - 0 ID=Thaps7370;Parent=Thaps7370;rank=1 chr8 . exon 78829 79986 . - . ID=Thaps7370.1;Parent=Thaps7370;constitutive=1;rank=1 chr8 . repeat_region 86904 86997 . + . description=MuDR1_TP chr8 ensembl protein_coding_gene 84257 86438 . - . ID=Thaps23662;biotype=protein_coding;description=Trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C6D0];external_name=Thaps23662;logic_name=jgi_thaps3 chr8 ensembl transcript 84257 86438 . - . ID=Thaps23662;Parent=Thaps23662;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 84257 85240 . - 0 ID=Thaps23662;Parent=Thaps23662;rank=4 chr8 . exon 84257 85240 . - . ID=Thaps23662.4;Parent=Thaps23662;constitutive=1;rank=4 chr8 . CDS 85322 85463 . - 0 ID=Thaps23662;Parent=Thaps23662;rank=3 chr8 . exon 85322 85463 . - . ID=Thaps23662.3;Parent=Thaps23662;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 85549 86048 . - 0 ID=Thaps23662;Parent=Thaps23662;rank=2 chr8 . exon 85549 86048 . - . ID=Thaps23662.2;Parent=Thaps23662;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 86148 86438 . - 0 ID=Thaps23662;Parent=Thaps23662;rank=1 chr8 . exon 86148 86438 . - . ID=Thaps23662.1;Parent=Thaps23662;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 80428 81063 . + . ID=Thaps263332;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6C8];external_name=Thaps263332;logic_name=jgi_thaps3 chr8 ensembl transcript 80428 81063 . + . ID=Thaps263332;Parent=Thaps263332;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 80428 80856 . + 0 ID=Thaps263332;Parent=Thaps263332;rank=1 chr8 . exon 80428 80856 . + . ID=Thaps263332.1;Parent=Thaps263332;constitutive=1;rank=1 chr8 . CDS 81022 81063 . + 0 ID=Thaps263332;Parent=Thaps263332;rank=2 chr8 . exon 81022 81063 . + . ID=Thaps263332.2;Parent=Thaps263332;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 82020 83981 . + . ID=Thaps7372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6C9];external_name=Thaps7372;logic_name=jgi_thaps3 chr8 ensembl transcript 82020 83981 . + . ID=Thaps7372;Parent=Thaps7372;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 82020 82171 . + 0 ID=Thaps7372;Parent=Thaps7372;rank=1 chr8 . exon 82020 82171 . + . ID=Thaps7372.1;Parent=Thaps7372;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 82276 82429 . + 0 ID=Thaps7372;Parent=Thaps7372;rank=2 chr8 . exon 82276 82429 . + . ID=Thaps7372.2;Parent=Thaps7372;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 82525 83024 . + 0 ID=Thaps7372;Parent=Thaps7372;rank=3 chr8 . exon 82525 83024 . + . ID=Thaps7372.3;Parent=Thaps7372;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 83132 83273 . + 0 ID=Thaps7372;Parent=Thaps7372;rank=4 chr8 . exon 83132 83273 . + . ID=Thaps7372.4;Parent=Thaps7372;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 83355 83981 . + 0 ID=Thaps7372;Parent=Thaps7372;rank=5 chr8 . exon 83355 83981 . + . ID=Thaps7372.5;Parent=Thaps7372;constitutive=1;rank=5 chr8 ensembl protein_coding_gene 88681 90846 . - . ID=Thaps7374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6D1];external_name=Thaps7374;logic_name=jgi_thaps3 chr8 ensembl transcript 88681 90846 . - . ID=Thaps7374;Parent=Thaps7374;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 88681 90846 . - 0 ID=Thaps7374;Parent=Thaps7374;rank=1 chr8 . exon 88681 90846 . - . ID=Thaps7374.1;Parent=Thaps7374;constitutive=1;rank=1 chr8 . repeat_region 90499 90517 . ? . description=dust chr8 . repeat_region 90676 90711 . ? . description=trf chr8 . repeat_region 90676 90711 . ? . description=dust chr8 . repeat_region 90962 90981 . ? . description=trf chr8 . repeat_region 97409 97434 . ? . description=dust chr8 . repeat_region 97412 97434 . ? . description=trf chr8 . repeat_region 98833 98852 . ? . description=trf chr8 . repeat_region 98833 98852 . ? . description=dust chr8 ensembl protein_coding_gene 99563 100705 . + . ID=Thaps269325;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6D7];external_name=Thaps269325;logic_name=jgi_thaps3 chr8 ensembl transcript 99563 100705 . + . ID=Thaps269325;Parent=Thaps269325;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 99563 100705 . + 0 ID=Thaps269325;Parent=Thaps269325;rank=1 chr8 . exon 99563 100705 . + . ID=Thaps269325.1;Parent=Thaps269325;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 94421 96080 . + . ID=Thaps29075;biotype=protein_coding;description=Argininosuccinate lyase [Source:UniProtKB/TrEMBL%3BAcc:B8C6D4];external_name=ASL;logic_name=jgi_thaps3 chr8 ensembl transcript 94421 96080 . + . ID=Thaps29075;Parent=Thaps29075;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 94421 94439 . + 0 ID=Thaps29075;Parent=Thaps29075;rank=1 chr8 . exon 94421 94439 . + . ID=Thaps29075.1;Parent=Thaps29075;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 94591 94693 . + 0 ID=Thaps29075;Parent=Thaps29075;rank=2 chr8 . exon 94591 94693 . + . ID=Thaps29075.2;Parent=Thaps29075;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 94793 96080 . + 0 ID=Thaps29075;Parent=Thaps29075;rank=3 chr8 . exon 94793 96080 . + . ID=Thaps29075.3;Parent=Thaps29075;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 91196 92680 . + . ID=Thaps7375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6D2];external_name=Thaps7375;logic_name=jgi_thaps3 chr8 ensembl transcript 91196 92680 . + . ID=Thaps7375;Parent=Thaps7375;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 91196 92680 . + 0 ID=Thaps7375;Parent=Thaps7375;rank=1 chr8 . exon 91196 92680 . + . ID=Thaps7375.1;Parent=Thaps7375;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 92833 94345 . - . ID=Thaps7376;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6D3];external_name=Thaps7376;logic_name=jgi_thaps3 chr8 ensembl transcript 92833 94345 . - . ID=Thaps7376;Parent=Thaps7376;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 92833 93829 . - 0 ID=Thaps7376;Parent=Thaps7376;rank=2 chr8 . exon 92833 93829 . - . ID=Thaps7376.2;Parent=Thaps7376;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 94005 94345 . - 0 ID=Thaps7376;Parent=Thaps7376;rank=1 chr8 . exon 94005 94345 . - . ID=Thaps7376.1;Parent=Thaps7376;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 96278 96953 . - . ID=Thaps7378;biotype=protein_coding;description=Leucine-rich repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6D5];external_name=Thaps7378;logic_name=jgi_thaps3 chr8 ensembl transcript 96278 96953 . - . ID=Thaps7378;Parent=Thaps7378;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 96278 96460 . - 0 ID=Thaps7378;Parent=Thaps7378;rank=2 chr8 . exon 96278 96460 . - . ID=Thaps7378.2;Parent=Thaps7378;constitutive=1;rank=2 chr8 . CDS 96546 96953 . - 0 ID=Thaps7378;Parent=Thaps7378;rank=1 chr8 . exon 96546 96953 . - . ID=Thaps7378.1;Parent=Thaps7378;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 97182 98948 . - . ID=Thaps7379;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6D6];external_name=Thaps7379;logic_name=jgi_thaps3 chr8 ensembl transcript 97182 98948 . - . ID=Thaps7379;Parent=Thaps7379;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 97182 98948 . - 0 ID=Thaps7379;Parent=Thaps7379;rank=1 chr8 . exon 97182 98948 . - . ID=Thaps7379.1;Parent=Thaps7379;constitutive=1;rank=1 chr8 . repeat_region 105739 105939 . - . description=TE2c_TP chr8 . repeat_region 105773 105965 . + . description=TE2c_TP chr8 . repeat_region 105956 106119 . - . description=Harbinger2N_TP chr8 . repeat_region 106338 106382 . - . description=Harbinger1_TP chr8 . repeat_region 107687 107905 . - . description=tp13_ASNotSingleton chr8 . repeat_region 108440 108758 . + . description=TE2c_TP chr8 . repeat_region 108578 108869 . - . description=TE2c_TP chr8 ensembl protein_coding_gene 101902 103221 . + . ID=Thaps23665;biotype=protein_coding;description=Putative uncharacterized protein HSF7 [Source:UniProtKB/TrEMBL%3BAcc:B8C6D8];external_name=HSF7;logic_name=jgi_thaps3 chr8 ensembl transcript 101902 103221 . + . ID=Thaps23665;Parent=Thaps23665;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 101902 103221 . + 0 ID=Thaps23665;Parent=Thaps23665;rank=1 chr8 . exon 101902 103221 . + . ID=Thaps23665.1;Parent=Thaps23665;constitutive=1;rank=1 chr8 ensembl gene 107098 108431 . - . ID=Thaps263338;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr8 ensembl transcript 107098 108431 . - . ID=Thaps263338;Parent=Thaps263338;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr8 . exon 107098 107111 . - . ID=Thaps263338.3;Parent=Thaps263338;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . exon 107299 107550 . - . ID=Thaps263338.2;Parent=Thaps263338;constitutive=1;rank=2 chr8 . exon 107692 108431 . - . ID=Thaps263338.1;Parent=Thaps263338;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 103887 105327 . - . ID=Thaps93;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6D9];external_name=Thaps93;logic_name=jgi_thaps3 chr8 ensembl transcript 103887 105327 . - . ID=Thaps93;Parent=Thaps93;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 103887 104471 . - 0 ID=Thaps93;Parent=Thaps93;rank=2 chr8 . exon 103887 104471 . - . ID=Thaps93.2;Parent=Thaps93;constitutive=1;rank=2 chr8 . CDS 104836 105327 . - 0 ID=Thaps93;Parent=Thaps93;rank=1 chr8 . exon 104836 105327 . - . ID=Thaps93.1;Parent=Thaps93;constitutive=1;rank=1 chr8 . repeat_region 111468 111672 . + . description=Copia6LTR_TP chr8 . repeat_region 113174 113423 . ? . description=trf chr8 . repeat_region 113831 114035 . + . description=Copia6LTR_TP chr8 . repeat_region 115481 115685 . + . description=Copia6LTR_TP chr8 . repeat_region 117317 117365 . ? . description=dust chr8 . repeat_region 117647 117707 . ? . description=dust chr8 . repeat_region 117656 117676 . ? . description=trf chr8 ensembl protein_coding_gene 117227 117913 . - . ID=Thaps23666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6E2];external_name=Thaps23666;logic_name=jgi_thaps3 chr8 ensembl transcript 117227 117913 . - . ID=Thaps23666;Parent=Thaps23666;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 117227 117913 . - 0 ID=Thaps23666;Parent=Thaps23666;rank=1 chr8 . exon 117227 117913 . - . ID=Thaps23666.1;Parent=Thaps23666;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 118394 120798 . + . ID=Thaps23667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6E3];external_name=Thaps23667;logic_name=jgi_thaps3 chr8 ensembl transcript 118394 120798 . + . ID=Thaps23667;Parent=Thaps23667;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 118394 118768 . + 0 ID=Thaps23667;Parent=Thaps23667;rank=1 chr8 . exon 118394 118768 . + . ID=Thaps23667.1;Parent=Thaps23667;constitutive=1;rank=1 chr8 . CDS 119104 120798 . + 0 ID=Thaps23667;Parent=Thaps23667;rank=2 chr8 . exon 119104 120798 . + . ID=Thaps23667.2;Parent=Thaps23667;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 111939 112857 . + . ID=Thaps7394;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6E0];external_name=Thaps7394;logic_name=jgi_thaps3 chr8 ensembl transcript 111939 112857 . + . ID=Thaps7394;Parent=Thaps7394;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 111939 112177 . + 0 ID=Thaps7394;Parent=Thaps7394;rank=1 chr8 . exon 111939 112177 . + . ID=Thaps7394.1;Parent=Thaps7394;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 112257 112857 . + 0 ID=Thaps7394;Parent=Thaps7394;rank=2 chr8 . exon 112257 112857 . + . ID=Thaps7394.2;Parent=Thaps7394;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 114206 117074 . + . ID=Thaps7395;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6E1];external_name=Thaps7395;logic_name=jgi_thaps3 chr8 ensembl transcript 114206 117074 . + . ID=Thaps7395;Parent=Thaps7395;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 114206 114400 . + 0 ID=Thaps7395;Parent=Thaps7395;rank=1 chr8 . exon 114206 114400 . + . ID=Thaps7395.1;Parent=Thaps7395;constitutive=1;rank=1 chr8 . CDS 114490 114543 . + 0 ID=Thaps7395;Parent=Thaps7395;rank=2 chr8 . exon 114490 114543 . + . ID=Thaps7395.2;Parent=Thaps7395;constitutive=1;rank=2 chr8 . CDS 114618 115412 . + 0 ID=Thaps7395;Parent=Thaps7395;rank=3 chr8 . exon 114618 115412 . + . ID=Thaps7395.3;Parent=Thaps7395;constitutive=1;rank=3 chr8 . CDS 115805 116193 . + 0 ID=Thaps7395;Parent=Thaps7395;rank=4 chr8 . exon 115805 116193 . + . ID=Thaps7395.4;Parent=Thaps7395;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 116279 117074 . + 0 ID=Thaps7395;Parent=Thaps7395;rank=5 chr8 . exon 116279 117074 . + . ID=Thaps7395.5;Parent=Thaps7395;constitutive=1;ensembl_end_phase=1;rank=5 chr8 ensembl protein_coding_gene 126858 127376 . + . ID=Thaps18090;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6E5];external_name=Thaps18090;logic_name=jgi_thaps3 chr8 ensembl transcript 126858 127376 . + . ID=Thaps18090;Parent=Thaps18090;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 126858 127376 . + 0 ID=Thaps18090;Parent=Thaps18090;rank=1 chr8 . exon 126858 127376 . + . ID=Thaps18090.1;Parent=Thaps18090;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 121194 124256 . + . ID=Thaps23668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6E4];external_name=Thaps23668;logic_name=jgi_thaps3 chr8 ensembl transcript 121194 124256 . + . ID=Thaps23668;Parent=Thaps23668;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 121194 121378 . + 0 ID=Thaps23668;Parent=Thaps23668;rank=1 chr8 . exon 121194 121378 . + . ID=Thaps23668.1;Parent=Thaps23668;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 121491 122607 . + 0 ID=Thaps23668;Parent=Thaps23668;rank=2 chr8 . exon 121491 122607 . + . ID=Thaps23668.2;Parent=Thaps23668;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 122729 123122 . + 0 ID=Thaps23668;Parent=Thaps23668;rank=3 chr8 . exon 122729 123122 . + . ID=Thaps23668.3;Parent=Thaps23668;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 123203 123609 . + 0 ID=Thaps23668;Parent=Thaps23668;rank=4 chr8 . exon 123203 123609 . + . ID=Thaps23668.4;Parent=Thaps23668;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 123687 124256 . + 0 ID=Thaps23668;Parent=Thaps23668;rank=5 chr8 . exon 123687 124256 . + . ID=Thaps23668.5;Parent=Thaps23668;constitutive=1;rank=5 chr8 ensembl protein_coding_gene 128048 128560 . + . ID=Thaps23669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6E6];external_name=Thaps23669;logic_name=jgi_thaps3 chr8 ensembl transcript 128048 128560 . + . ID=Thaps23669;Parent=Thaps23669;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 128048 128560 . + 0 ID=Thaps23669;Parent=Thaps23669;rank=1 chr8 . exon 128048 128560 . + . ID=Thaps23669.1;Parent=Thaps23669;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 129017 129790 . + . ID=Thaps7401;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6E7];external_name=Thaps7401;logic_name=jgi_thaps3 chr8 ensembl transcript 129017 129790 . + . ID=Thaps7401;Parent=Thaps7401;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 129017 129790 . + 0 ID=Thaps7401;Parent=Thaps7401;rank=1 chr8 . exon 129017 129790 . + . ID=Thaps7401.1;Parent=Thaps7401;constitutive=1;rank=1 chr8 . repeat_region 129719 129750 . ? . description=trf chr8 . repeat_region 131084 131147 . ? . description=dust chr8 ensembl protein_coding_gene 134308 135366 . - . ID=Thaps23671;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6E9];external_name=Thaps23671;logic_name=jgi_thaps3 chr8 ensembl transcript 134308 135366 . - . ID=Thaps23671;Parent=Thaps23671;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 134308 135366 . - 0 ID=Thaps23671;Parent=Thaps23671;rank=1 chr8 . exon 134308 135366 . - . ID=Thaps23671.1;Parent=Thaps23671;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 136893 138413 . + . ID=Thaps23672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6F1];external_name=Thaps23672;logic_name=jgi_thaps3 chr8 ensembl transcript 136893 138413 . + . ID=Thaps23672;Parent=Thaps23672;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 136893 138413 . + 0 ID=Thaps23672;Parent=Thaps23672;rank=1 chr8 . exon 136893 138413 . + . ID=Thaps23672.1;Parent=Thaps23672;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 131105 132894 . + . ID=Thaps269327;biotype=protein_coding;description=Plastid RNA polymerase sigma factor [Source:UniProtKB/TrEMBL%3BAcc:B8C6E8];external_name=RPOD_3;logic_name=jgi_thaps3 chr8 ensembl transcript 131105 132894 . + . ID=Thaps269327;Parent=Thaps269327;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 131105 132172 . + 0 ID=Thaps269327;Parent=Thaps269327;rank=1 chr8 . exon 131105 132172 . + . ID=Thaps269327.1;Parent=Thaps269327;constitutive=1;rank=1 chr8 . CDS 132337 132894 . + 0 ID=Thaps269327;Parent=Thaps269327;rank=2 chr8 . exon 132337 132894 . + . ID=Thaps269327.2;Parent=Thaps269327;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 136069 136467 . - . ID=Thaps7404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6F0];external_name=Thaps7404;logic_name=jgi_thaps3 chr8 ensembl transcript 136069 136467 . - . ID=Thaps7404;Parent=Thaps7404;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 136069 136467 . - 0 ID=Thaps7404;Parent=Thaps7404;rank=1 chr8 . exon 136069 136467 . - . ID=Thaps7404.1;Parent=Thaps7404;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 138583 139318 . - . ID=Thaps7406;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6F2];external_name=Thaps7406;logic_name=jgi_thaps3 chr8 ensembl transcript 138583 139318 . - . ID=Thaps7406;Parent=Thaps7406;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 138583 139110 . - 0 ID=Thaps7406;Parent=Thaps7406;rank=2 chr8 . exon 138583 139110 . - . ID=Thaps7406.2;Parent=Thaps7406;constitutive=1;rank=2 chr8 . CDS 139184 139318 . - 0 ID=Thaps7406;Parent=Thaps7406;rank=1 chr8 . exon 139184 139318 . - . ID=Thaps7406.1;Parent=Thaps7406;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 140181 141744 . + . ID=Thaps14727;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6F3];external_name=Thaps14727;logic_name=jgi_thaps3 chr8 ensembl transcript 140181 141744 . + . ID=Thaps14727;Parent=Thaps14727;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 140181 140412 . + 0 ID=Thaps14727;Parent=Thaps14727;rank=1 chr8 . exon 140181 140412 . + . ID=Thaps14727.1;Parent=Thaps14727;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 140535 140770 . + 0 ID=Thaps14727;Parent=Thaps14727;rank=2 chr8 . exon 140535 140770 . + . ID=Thaps14727.2;Parent=Thaps14727;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 140872 141744 . + 0 ID=Thaps14727;Parent=Thaps14727;rank=3 chr8 . exon 140872 141744 . + . ID=Thaps14727.3;Parent=Thaps14727;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 146340 147058 . - . ID=Thaps17310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6F7];external_name=Thaps17310;logic_name=jgi_thaps3 chr8 ensembl transcript 146340 147058 . - . ID=Thaps17310;Parent=Thaps17310;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 146340 146658 . - 0 ID=Thaps17310;Parent=Thaps17310;rank=2 chr8 . exon 146340 146658 . - . ID=Thaps17310.2;Parent=Thaps17310;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 146736 147058 . - 0 ID=Thaps17310;Parent=Thaps17310;rank=1 chr8 . exon 146736 147058 . - . ID=Thaps17310.1;Parent=Thaps17310;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 147779 149757 . - . ID=Thaps23674;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6F8];external_name=Thaps23674;logic_name=jgi_thaps3 chr8 ensembl transcript 147779 149757 . - . ID=Thaps23674;Parent=Thaps23674;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 147779 149298 . - 0 ID=Thaps23674;Parent=Thaps23674;rank=2 chr8 . exon 147779 149298 . - . ID=Thaps23674.2;Parent=Thaps23674;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 149424 149757 . - 0 ID=Thaps23674;Parent=Thaps23674;rank=1 chr8 . exon 149424 149757 . - . ID=Thaps23674.1;Parent=Thaps23674;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 144114 144592 . - . ID=Thaps263343;biotype=protein_coding;description=Probable MaoC family protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6F5];external_name=Thaps263343;logic_name=jgi_thaps3 chr8 ensembl transcript 144114 144592 . - . ID=Thaps263343;Parent=Thaps263343;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 144114 144419 . - 0 ID=Thaps263343;Parent=Thaps263343;rank=2 chr8 . exon 144114 144419 . - . ID=Thaps263343.2;Parent=Thaps263343;constitutive=1;rank=2 chr8 . CDS 144456 144592 . - 0 ID=Thaps263343;Parent=Thaps263343;rank=1 chr8 . exon 144456 144592 . - . ID=Thaps263343.1;Parent=Thaps263343;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 144716 145612 . - . ID=Thaps263344;biotype=protein_coding;description=Probable citrate lyase beta chain [Source:UniProtKB/TrEMBL%3BAcc:B8C6F6];external_name=Thaps263344;logic_name=jgi_thaps3 chr8 ensembl transcript 144716 145612 . - . ID=Thaps263344;Parent=Thaps263344;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 144716 145404 . - 0 ID=Thaps263344;Parent=Thaps263344;rank=2 chr8 . exon 144716 145404 . - . ID=Thaps263344.2;Parent=Thaps263344;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 145426 145612 . - 0 ID=Thaps263344;Parent=Thaps263344;rank=1 chr8 . exon 145426 145612 . - . ID=Thaps263344.1;Parent=Thaps263344;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 142381 143960 . + . ID=Thaps269328;biotype=protein_coding;description=Beta subunit acetyl/propionyl-CoA carboxylase [Source:UniProtKB/TrEMBL%3BAcc:B8C6F4];external_name=PCB1;logic_name=jgi_thaps3 chr8 ensembl transcript 142381 143960 . + . ID=Thaps269328;Parent=Thaps269328;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 142381 143204 . + 0 ID=Thaps269328;Parent=Thaps269328;rank=1 chr8 . exon 142381 143204 . + . ID=Thaps269328.1;Parent=Thaps269328;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 143288 143960 . + 0 ID=Thaps269328;Parent=Thaps269328;rank=2 chr8 . exon 143288 143960 . + . ID=Thaps269328.2;Parent=Thaps269328;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . repeat_region 159537 159568 . ? . description=trf chr8 ensembl protein_coding_gene 150946 153266 . - . ID=Thaps23675;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6F9];external_name=Thaps23675;logic_name=jgi_thaps3 chr8 ensembl transcript 150946 153266 . - . ID=Thaps23675;Parent=Thaps23675;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 150946 151730 . - 0 ID=Thaps23675;Parent=Thaps23675;rank=2 chr8 . exon 150946 151730 . - . ID=Thaps23675.2;Parent=Thaps23675;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 151811 153266 . - 0 ID=Thaps23675;Parent=Thaps23675;rank=1 chr8 . exon 151811 153266 . - . ID=Thaps23675.1;Parent=Thaps23675;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 157719 159509 . + . ID=Thaps23677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G0];external_name=Thaps23677;logic_name=jgi_thaps3 chr8 ensembl transcript 157719 159509 . + . ID=Thaps23677;Parent=Thaps23677;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 157719 159509 . + 0 ID=Thaps23677;Parent=Thaps23677;rank=1 chr8 . exon 157719 159509 . + . ID=Thaps23677.1;Parent=Thaps23677;constitutive=1;rank=1 chr8 . repeat_region 163692 163699 . ? . description=dust chr8 . repeat_region 168786 168805 . ? . description=dust chr8 ensembl protein_coding_gene 159912 161745 . - . ID=Thaps13887;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G1];external_name=Thaps13887;logic_name=jgi_thaps3 chr8 ensembl transcript 159912 161745 . - . ID=Thaps13887;Parent=Thaps13887;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 159912 160714 . - 0 ID=Thaps13887;Parent=Thaps13887;rank=4 chr8 . exon 159912 160714 . - . ID=Thaps13887.4;Parent=Thaps13887;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 160829 160972 . - 0 ID=Thaps13887;Parent=Thaps13887;rank=3 chr8 . exon 160829 160972 . - . ID=Thaps13887.3;Parent=Thaps13887;constitutive=1;rank=3 chr8 . CDS 161107 161346 . - 0 ID=Thaps13887;Parent=Thaps13887;rank=2 chr8 . exon 161107 161346 . - . ID=Thaps13887.2;Parent=Thaps13887;constitutive=1;rank=2 chr8 . CDS 161436 161745 . - 0 ID=Thaps13887;Parent=Thaps13887;rank=1 chr8 . exon 161436 161745 . - . ID=Thaps13887.1;Parent=Thaps13887;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 162254 164509 . - . ID=Thaps23679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G2];external_name=Thaps23679;logic_name=jgi_thaps3 chr8 ensembl transcript 162254 164509 . - . ID=Thaps23679;Parent=Thaps23679;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 162254 164509 . - 0 ID=Thaps23679;Parent=Thaps23679;rank=1 chr8 . exon 162254 164509 . - . ID=Thaps23679.1;Parent=Thaps23679;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 165445 166851 . - . ID=Thaps7416;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G3];external_name=Thaps7416;logic_name=jgi_thaps3 chr8 ensembl transcript 165445 166851 . - . ID=Thaps7416;Parent=Thaps7416;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 165445 166851 . - 0 ID=Thaps7416;Parent=Thaps7416;rank=1 chr8 . exon 165445 166851 . - . ID=Thaps7416.1;Parent=Thaps7416;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 168441 171782 . + . ID=Thaps7417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G4];external_name=Thaps7417;logic_name=jgi_thaps3 chr8 ensembl transcript 168441 171782 . + . ID=Thaps7417;Parent=Thaps7417;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 168441 171782 . + 0 ID=Thaps7417;Parent=Thaps7417;rank=1 chr8 . exon 168441 171782 . + . ID=Thaps7417.1;Parent=Thaps7417;constitutive=1;rank=1 chr8 . repeat_region 174737 174762 . ? . description=trf chr8 . repeat_region 177531 177578 . ? . description=trf chr8 ensembl protein_coding_gene 172475 173732 . - . ID=Thaps263346;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G5];external_name=Thaps263346;logic_name=jgi_thaps3 chr8 ensembl transcript 172475 173732 . - . ID=Thaps263346;Parent=Thaps263346;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 172475 172622 . - 0 ID=Thaps263346;Parent=Thaps263346;rank=4 chr8 . exon 172475 172622 . - . ID=Thaps263346.4;Parent=Thaps263346;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 172703 172904 . - 0 ID=Thaps263346;Parent=Thaps263346;rank=3 chr8 . exon 172703 172904 . - . ID=Thaps263346.3;Parent=Thaps263346;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 172989 173261 . - 0 ID=Thaps263346;Parent=Thaps263346;rank=2 chr8 . exon 172989 173261 . - . ID=Thaps263346.2;Parent=Thaps263346;constitutive=1;rank=2 chr8 . CDS 173351 173732 . - 0 ID=Thaps263346;Parent=Thaps263346;rank=1 chr8 . exon 173351 173732 . - . ID=Thaps263346.1;Parent=Thaps263346;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . repeat_region 182136 182144 . ? . description=dust chr8 . repeat_region 185643 185754 . - . description=Harbinger2N_TP chr8 . repeat_region 185658 185724 . ? . description=dust chr8 . repeat_region 185728 185754 . ? . description=dust chr8 . repeat_region 186018 186025 . ? . description=dust chr8 ensembl protein_coding_gene 182280 184647 . + . ID=Thaps7419;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G6];external_name=Thaps7419;logic_name=jgi_thaps3 chr8 ensembl transcript 182280 184647 . + . ID=Thaps7419;Parent=Thaps7419;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 182280 182467 . + 0 ID=Thaps7419;Parent=Thaps7419;rank=1 chr8 . exon 182280 182467 . + . ID=Thaps7419.1;Parent=Thaps7419;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 182753 184296 . + 0 ID=Thaps7419;Parent=Thaps7419;rank=2 chr8 . exon 182753 184296 . + . ID=Thaps7419.2;Parent=Thaps7419;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 184391 184647 . + 0 ID=Thaps7419;Parent=Thaps7419;rank=3 chr8 . exon 184391 184647 . + . ID=Thaps7419.3;Parent=Thaps7419;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 185122 187207 . + . ID=Thaps7420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G7];external_name=Thaps7420;logic_name=jgi_thaps3 chr8 ensembl transcript 185122 187207 . + . ID=Thaps7420;Parent=Thaps7420;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 185122 185599 . + 0 ID=Thaps7420;Parent=Thaps7420;rank=1 chr8 . exon 185122 185599 . + . ID=Thaps7420.1;Parent=Thaps7420;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 185813 186495 . + 0 ID=Thaps7420;Parent=Thaps7420;rank=2 chr8 . exon 185813 186495 . + . ID=Thaps7420.2;Parent=Thaps7420;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 186581 186620 . + 0 ID=Thaps7420;Parent=Thaps7420;rank=3 chr8 . exon 186581 186620 . + . ID=Thaps7420.3;Parent=Thaps7420;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 186735 187207 . + 0 ID=Thaps7420;Parent=Thaps7420;rank=4 chr8 . exon 186735 187207 . + . ID=Thaps7420.4;Parent=Thaps7420;constitutive=1;ensembl_end_phase=2;rank=4 chr8 ensembl protein_coding_gene 198839 199753 . + . ID=Thaps23682;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6H2];external_name=Thaps23682;logic_name=jgi_thaps3 chr8 ensembl transcript 198839 199753 . + . ID=Thaps23682;Parent=Thaps23682;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 198839 199753 . + 0 ID=Thaps23682;Parent=Thaps23682;rank=1 chr8 . exon 198839 199753 . + . ID=Thaps23682.1;Parent=Thaps23682;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 191400 191948 . + . ID=Thaps263347;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G8];external_name=Thaps263347;logic_name=jgi_thaps3 chr8 ensembl transcript 191400 191948 . + . ID=Thaps263347;Parent=Thaps263347;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 191400 191948 . + 0 ID=Thaps263347;Parent=Thaps263347;rank=1 chr8 . exon 191400 191948 . + . ID=Thaps263347.1;Parent=Thaps263347;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 193217 194422 . - . ID=Thaps35911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6G9];external_name=Thaps35911;logic_name=jgi_thaps3 chr8 ensembl transcript 193217 194422 . - . ID=Thaps35911;Parent=Thaps35911;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 193217 194256 . - 0 ID=Thaps35911;Parent=Thaps35911;rank=2 chr8 . exon 193217 194256 . - . ID=Thaps35911.2;Parent=Thaps35911;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 194332 194422 . - 0 ID=Thaps35911;Parent=Thaps35911;rank=1 chr8 . exon 194332 194422 . - . ID=Thaps35911.1;Parent=Thaps35911;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 195644 195970 . + . ID=Thaps7423;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6H0];external_name=Thaps7423;logic_name=jgi_thaps3 chr8 ensembl transcript 195644 195970 . + . ID=Thaps7423;Parent=Thaps7423;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 195644 195970 . + 0 ID=Thaps7423;Parent=Thaps7423;rank=1 chr8 . exon 195644 195970 . + . ID=Thaps7423.1;Parent=Thaps7423;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 197559 198062 . - . ID=Thaps7424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6H1];external_name=Thaps7424;logic_name=jgi_thaps3 chr8 ensembl transcript 197559 198062 . - . ID=Thaps7424;Parent=Thaps7424;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 197559 198062 . - 0 ID=Thaps7424;Parent=Thaps7424;rank=1 chr8 . exon 197559 198062 . - . ID=Thaps7424.1;Parent=Thaps7424;constitutive=1;rank=1 chr8 . repeat_region 202217 202227 . ? . description=dust chr8 . repeat_region 203559 203585 . ? . description=trf chr8 . repeat_region 207240 207355 . ? . description=trf chr8 . repeat_region 207240 207384 . ? . description=dust chr8 . repeat_region 207240 207399 . ? . description=trf chr8 . repeat_region 207254 207387 . ? . description=trf chr8 . repeat_region 207254 207397 . ? . description=trf chr8 . repeat_region 207499 207544 . ? . description=trf chr8 . repeat_region 207574 207664 . ? . description=trf chr8 . repeat_region 207611 207664 . ? . description=dust chr8 . repeat_region 207668 207726 . ? . description=trf chr8 . repeat_region 208084 208203 . ? . description=trf chr8 . repeat_region 208615 208694 . ? . description=trf chr8 . repeat_region 209121 209210 . + . description=Harbinger3_TP chr8 ensembl protein_coding_gene 206131 206792 . - . ID=Thaps23684;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6H5];external_name=Thaps23684;logic_name=jgi_thaps3 chr8 ensembl transcript 206131 206792 . - . ID=Thaps23684;Parent=Thaps23684;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 206131 206609 . - 0 ID=Thaps23684;Parent=Thaps23684;rank=2 chr8 . exon 206131 206609 . - . ID=Thaps23684.2;Parent=Thaps23684;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 206741 206792 . - 0 ID=Thaps23684;Parent=Thaps23684;rank=1 chr8 . exon 206741 206792 . - . ID=Thaps23684.1;Parent=Thaps23684;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 204310 205180 . - . ID=Thaps35818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6H4];external_name=Thaps35818;logic_name=jgi_thaps3 chr8 ensembl transcript 204310 205180 . - . ID=Thaps35818;Parent=Thaps35818;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 204310 204838 . - 0 ID=Thaps35818;Parent=Thaps35818;rank=2 chr8 . exon 204310 204838 . - . ID=Thaps35818.2;Parent=Thaps35818;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 205140 205180 . - 0 ID=Thaps35818;Parent=Thaps35818;rank=1 chr8 . exon 205140 205180 . - . ID=Thaps35818.1;Parent=Thaps35818;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 199960 203682 . + . ID=Thaps7426;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6H3];external_name=Thaps7426;logic_name=jgi_thaps3 chr8 ensembl transcript 199960 203682 . + . ID=Thaps7426;Parent=Thaps7426;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 199960 200241 . + 0 ID=Thaps7426;Parent=Thaps7426;rank=1 chr8 . exon 199960 200241 . + . ID=Thaps7426.1;Parent=Thaps7426;constitutive=1;rank=1 chr8 . CDS 200279 200541 . + 0 ID=Thaps7426;Parent=Thaps7426;rank=2 chr8 . exon 200279 200541 . + . ID=Thaps7426.2;Parent=Thaps7426;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 200672 201408 . + 0 ID=Thaps7426;Parent=Thaps7426;rank=3 chr8 . exon 200672 201408 . + . ID=Thaps7426.3;Parent=Thaps7426;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 201476 201588 . + 0 ID=Thaps7426;Parent=Thaps7426;rank=4 chr8 . exon 201476 201588 . + . ID=Thaps7426.4;Parent=Thaps7426;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 201669 201863 . + 0 ID=Thaps7426;Parent=Thaps7426;rank=5 chr8 . exon 201669 201863 . + . ID=Thaps7426.5;Parent=Thaps7426;constitutive=1;rank=5 chr8 . CDS 201902 201969 . + 0 ID=Thaps7426;Parent=Thaps7426;rank=6 chr8 . exon 201902 201969 . + . ID=Thaps7426.6;Parent=Thaps7426;constitutive=1;ensembl_end_phase=2;rank=6 chr8 . CDS 202272 202599 . + 0 ID=Thaps7426;Parent=Thaps7426;rank=7 chr8 . exon 202272 202599 . + . ID=Thaps7426.7;Parent=Thaps7426;constitutive=1;ensembl_end_phase=1;rank=7 chr8 . CDS 202676 202846 . + 0 ID=Thaps7426;Parent=Thaps7426;rank=8 chr8 . exon 202676 202846 . + . ID=Thaps7426.8;Parent=Thaps7426;constitutive=1;rank=8 chr8 . CDS 202924 203682 . + 0 ID=Thaps7426;Parent=Thaps7426;rank=9 chr8 . exon 202924 203682 . + . ID=Thaps7426.9;Parent=Thaps7426;constitutive=1;rank=9 chr8 . repeat_region 211414 211495 . - . description=MuDR1_TP chr8 ensembl protein_coding_gene 210488 211149 . - . ID=Thaps23685;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6H6];external_name=Thaps23685;logic_name=jgi_thaps3 chr8 ensembl transcript 210488 211149 . - . ID=Thaps23685;Parent=Thaps23685;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 210488 210966 . - 0 ID=Thaps23685;Parent=Thaps23685;rank=2 chr8 . exon 210488 210966 . - . ID=Thaps23685.2;Parent=Thaps23685;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 211098 211149 . - 0 ID=Thaps23685;Parent=Thaps23685;rank=1 chr8 . exon 211098 211149 . - . ID=Thaps23685.1;Parent=Thaps23685;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 211527 213743 . + . ID=Thaps23686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6H7];external_name=Thaps23686;logic_name=jgi_thaps3 chr8 ensembl transcript 211527 213743 . + . ID=Thaps23686;Parent=Thaps23686;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 211527 212835 . + 0 ID=Thaps23686;Parent=Thaps23686;rank=1 chr8 . exon 211527 212835 . + . ID=Thaps23686.1;Parent=Thaps23686;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 212881 213743 . + 0 ID=Thaps23686;Parent=Thaps23686;rank=2 chr8 . exon 212881 213743 . + . ID=Thaps23686.2;Parent=Thaps23686;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 218400 220596 . + . ID=Thaps23688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6H9];external_name=Thaps23688;logic_name=jgi_thaps3 chr8 ensembl transcript 218400 220596 . + . ID=Thaps23688;Parent=Thaps23688;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 218400 219129 . + 0 ID=Thaps23688;Parent=Thaps23688;rank=1 chr8 . exon 218400 219129 . + . ID=Thaps23688.1;Parent=Thaps23688;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 219226 220090 . + 0 ID=Thaps23688;Parent=Thaps23688;rank=2 chr8 . exon 219226 220090 . + . ID=Thaps23688.2;Parent=Thaps23688;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 220197 220596 . + 0 ID=Thaps23688;Parent=Thaps23688;rank=3 chr8 ensembl protein_coding_gene 215568 217701 . - . ID=Thaps263349;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C6H8];external_name=Thaps263349;logic_name=jgi_thaps3 chr8 ensembl transcript 215568 217701 . - . ID=Thaps263349;Parent=Thaps263349;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 215568 216008 . - 0 ID=Thaps263349;Parent=Thaps263349;rank=6 chr8 . exon 215568 216008 . - . ID=Thaps263349.6;Parent=Thaps263349;constitutive=1;rank=6 chr8 . CDS 216112 216357 . - 0 ID=Thaps263349;Parent=Thaps263349;rank=5 chr8 . exon 216112 216357 . - . ID=Thaps263349.5;Parent=Thaps263349;constitutive=1;rank=5 chr8 . CDS 216493 216692 . - 0 ID=Thaps263349;Parent=Thaps263349;rank=4 chr8 . exon 216493 216692 . - . ID=Thaps263349.4;Parent=Thaps263349;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 216782 216806 . - 0 ID=Thaps263349;Parent=Thaps263349;rank=3 chr8 . exon 216782 216806 . - . ID=Thaps263349.3;Parent=Thaps263349;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 216908 217329 . - 0 ID=Thaps263349;Parent=Thaps263349;rank=2 chr8 . exon 216908 217329 . - . ID=Thaps263349.2;Parent=Thaps263349;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 217417 217701 . - 0 ID=Thaps263349;Parent=Thaps263349;rank=1 chr8 . exon 217417 217701 . - . ID=Thaps263349.1;Parent=Thaps263349;constitutive=1;rank=1 chr8 . repeat_region 221979 222022 . ? . description=trf chr8 . repeat_region 224095 224126 . ? . description=dust chr8 . exon 220197 220596 . + . ID=Thaps23688.3;Parent=Thaps23688;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 220913 223440 . - . ID=Thaps23689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6I0];external_name=Thaps23689;logic_name=jgi_thaps3 chr8 ensembl transcript 220913 223440 . - . ID=Thaps23689;Parent=Thaps23689;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 220913 221307 . - 0 ID=Thaps23689;Parent=Thaps23689;rank=3 chr8 . exon 220913 221307 . - . ID=Thaps23689.3;Parent=Thaps23689;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 221385 222559 . - 0 ID=Thaps23689;Parent=Thaps23689;rank=2 chr8 . exon 221385 222559 . - . ID=Thaps23689.2;Parent=Thaps23689;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 222647 223440 . - 0 ID=Thaps23689;Parent=Thaps23689;rank=1 chr8 . exon 222647 223440 . - . ID=Thaps23689.1;Parent=Thaps23689;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 227794 230103 . + . ID=Thaps23691;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6I3];external_name=Thaps23691;logic_name=jgi_thaps3 chr8 ensembl transcript 227794 230103 . + . ID=Thaps23691;Parent=Thaps23691;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 227794 228050 . + 0 ID=Thaps23691;Parent=Thaps23691;rank=1 chr8 . exon 227794 228050 . + . ID=Thaps23691.1;Parent=Thaps23691;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 228125 229299 . + 0 ID=Thaps23691;Parent=Thaps23691;rank=2 chr8 . exon 228125 229299 . + . ID=Thaps23691.2;Parent=Thaps23691;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 229370 230103 . + 0 ID=Thaps23691;Parent=Thaps23691;rank=3 chr8 . exon 229370 230103 . + . ID=Thaps23691.3;Parent=Thaps23691;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 224826 225807 . + . ID=Thaps263350;biotype=protein_coding;description=RPC25%2C-like protein to dna-directed RNA polymerase III 25 kDa polypeptide [Source:UniProtKB/TrEMBL%3BAcc:B8C6I1];external_name=RPC25;logic_name=jgi_thaps3 chr8 ensembl transcript 224826 225807 . + . ID=Thaps263350;Parent=Thaps263350;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 224826 225225 . + 0 ID=Thaps263350;Parent=Thaps263350;rank=1 chr8 . exon 224826 225225 . + . ID=Thaps263350.1;Parent=Thaps263350;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 225328 225437 . + 0 ID=Thaps263350;Parent=Thaps263350;rank=2 chr8 . exon 225328 225437 . + . ID=Thaps263350.2;Parent=Thaps263350;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 225616 225623 . + 0 ID=Thaps263350;Parent=Thaps263350;rank=3 chr8 . exon 225616 225623 . + . ID=Thaps263350.3;Parent=Thaps263350;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 225656 225807 . + 0 ID=Thaps263350;Parent=Thaps263350;rank=4 chr8 . exon 225656 225807 . + . ID=Thaps263350.4;Parent=Thaps263350;constitutive=1;ensembl_end_phase=2;rank=4 chr8 ensembl protein_coding_gene 226045 227507 . - . ID=Thaps7435;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6I2];external_name=Thaps7435;logic_name=jgi_thaps3 chr8 ensembl transcript 226045 227507 . - . ID=Thaps7435;Parent=Thaps7435;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 226045 227232 . - 0 ID=Thaps7435;Parent=Thaps7435;rank=2 chr8 . exon 226045 227232 . - . ID=Thaps7435.2;Parent=Thaps7435;constitutive=1;rank=2 chr8 . CDS 227310 227507 . - 0 ID=Thaps7435;Parent=Thaps7435;rank=1 chr8 . exon 227310 227507 . - . ID=Thaps7435.1;Parent=Thaps7435;constitutive=1;rank=1 chr8 . biological_region 237977 237977 0.999 - . logic_name=eponine chr8 ensembl protein_coding_gene 235025 235649 . + . ID=Thaps18624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6I5];external_name=Thaps18624;logic_name=jgi_thaps3 chr8 ensembl transcript 235025 235649 . + . ID=Thaps18624;Parent=Thaps18624;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 235025 235361 . + 0 ID=Thaps18624;Parent=Thaps18624;rank=1 chr8 . exon 235025 235361 . + . ID=Thaps18624.1;Parent=Thaps18624;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 235453 235649 . + 0 ID=Thaps18624;Parent=Thaps18624;rank=2 chr8 . exon 235453 235649 . + . ID=Thaps18624.2;Parent=Thaps18624;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 231557 234277 . - . ID=Thaps23692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6I4];external_name=Thaps23692;logic_name=jgi_thaps3 chr8 ensembl transcript 231557 234277 . - . ID=Thaps23692;Parent=Thaps23692;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 231557 234277 . - 0 ID=Thaps23692;Parent=Thaps23692;rank=1 chr8 . exon 231557 234277 . - . ID=Thaps23692.1;Parent=Thaps23692;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 235962 237962 . - . ID=Thaps23694;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6I6];external_name=Thaps23694;logic_name=jgi_thaps3 chr8 ensembl transcript 235962 237962 . - . ID=Thaps23694;Parent=Thaps23694;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 235962 237962 . - 0 ID=Thaps23694;Parent=Thaps23694;rank=1 chr8 . exon 235962 237962 . - . ID=Thaps23694.1;Parent=Thaps23694;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 238554 242700 . + . ID=Thaps7440;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6I7];external_name=Thaps7440;logic_name=jgi_thaps3 chr8 ensembl transcript 238554 242700 . + . ID=Thaps7440;Parent=Thaps7440;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 238554 239172 . + 0 ID=Thaps7440;Parent=Thaps7440;rank=1 chr8 . exon 238554 239172 . + . ID=Thaps7440.1;Parent=Thaps7440;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 239301 239446 . + 0 ID=Thaps7440;Parent=Thaps7440;rank=2 chr8 . exon 239301 239446 . + . ID=Thaps7440.2;Parent=Thaps7440;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 239679 239827 . + 0 ID=Thaps7440;Parent=Thaps7440;rank=3 chr8 . CDS 239952 241996 . + 0 ID=Thaps7440;Parent=Thaps7440;rank=4 chr8 . CDS 242024 242339 . + 0 ID=Thaps7440;Parent=Thaps7440;rank=5 chr8 . CDS 242427 242700 . + 0 ID=Thaps7440;Parent=Thaps7440;rank=6 chr8 . repeat_region 244705 244741 . ? . description=trf chr8 . repeat_region 248429 248457 . ? . description=trf chr8 . repeat_region 248429 248457 . ? . description=dust chr8 ensembl protein_coding_gene 243053 244176 . - . ID=Thaps17579;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6I8];external_name=Thaps17579;logic_name=jgi_thaps3 chr8 ensembl transcript 243053 244176 . - . ID=Thaps17579;Parent=Thaps17579;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 243053 243390 . - 0 ID=Thaps17579;Parent=Thaps17579;rank=5 chr8 . exon 243053 243390 . - . ID=Thaps17579.5;Parent=Thaps17579;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . CDS 243478 243689 . - 0 ID=Thaps17579;Parent=Thaps17579;rank=4 chr8 . exon 243478 243689 . - . ID=Thaps17579.4;Parent=Thaps17579;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 243779 243835 . - 0 ID=Thaps17579;Parent=Thaps17579;rank=3 chr8 . exon 243779 243835 . - . ID=Thaps17579.3;Parent=Thaps17579;constitutive=1;rank=3 chr8 . CDS 243923 243953 . - 0 ID=Thaps17579;Parent=Thaps17579;rank=2 chr8 . exon 243923 243953 . - . ID=Thaps17579.2;Parent=Thaps17579;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 244095 244176 . - 0 ID=Thaps17579;Parent=Thaps17579;rank=1 chr8 . exon 244095 244176 . - . ID=Thaps17579.1;Parent=Thaps17579;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 247667 249250 . + . ID=Thaps36007;biotype=protein_coding;external_name=Thaps36007;logic_name=jgi_thaps3 chr8 ensembl transcript 247667 249250 . + . ID=Thaps36007;Parent=Thaps36007;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 247667 248393 . + 0 ID=Thaps36007;Parent=Thaps36007;rank=1 chr8 . exon 247667 248393 . + . ID=Thaps36007.1;Parent=Thaps36007;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 248553 249250 . + 0 ID=Thaps36007;Parent=Thaps36007;rank=2 chr8 . exon 248553 249250 . + . ID=Thaps36007.2;Parent=Thaps36007;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . exon 239679 239827 . + . ID=Thaps7440.3;Parent=Thaps7440;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . exon 239952 241996 . + . ID=Thaps7440.4;Parent=Thaps7440;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . exon 242024 242339 . + . ID=Thaps7440.5;Parent=Thaps7440;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . exon 242427 242700 . + . ID=Thaps7440.6;Parent=Thaps7440;constitutive=1;ensembl_end_phase=1;rank=6 chr8 ensembl protein_coding_gene 245973 246811 . + . ID=Thaps7442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6I9];external_name=Thaps7442;logic_name=jgi_thaps3 chr8 ensembl transcript 245973 246811 . + . ID=Thaps7442;Parent=Thaps7442;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 245973 246165 . + 0 ID=Thaps7442;Parent=Thaps7442;rank=1 chr8 . exon 245973 246165 . + . ID=Thaps7442.1;Parent=Thaps7442;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 246567 246811 . + 0 ID=Thaps7442;Parent=Thaps7442;rank=2 chr8 . exon 246567 246811 . + . ID=Thaps7442.2;Parent=Thaps7442;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 249361 250677 . - . ID=Thaps7444;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6J1];external_name=Thaps7444;logic_name=jgi_thaps3 chr8 ensembl transcript 249361 250677 . - . ID=Thaps7444;Parent=Thaps7444;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 249361 250677 . - 0 ID=Thaps7444;Parent=Thaps7444;rank=1 chr8 . exon 249361 250677 . - . ID=Thaps7444.1;Parent=Thaps7444;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 255379 262958 . - . ID=Thaps23697;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6J4];external_name=Thaps23697;logic_name=jgi_thaps3 chr8 ensembl transcript 255379 262958 . - . ID=Thaps23697;Parent=Thaps23697;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 255379 257820 . - 0 ID=Thaps23697;Parent=Thaps23697;rank=5 chr8 . exon 255379 257820 . - . ID=Thaps23697.5;Parent=Thaps23697;constitutive=1;rank=5 chr8 . CDS 257909 258680 . - 0 ID=Thaps23697;Parent=Thaps23697;rank=4 chr8 . exon 257909 258680 . - . ID=Thaps23697.4;Parent=Thaps23697;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 258775 259681 . - 0 ID=Thaps23697;Parent=Thaps23697;rank=3 chr8 . exon 258775 259681 . - . ID=Thaps23697.3;Parent=Thaps23697;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 259760 260697 . - 0 ID=Thaps23697;Parent=Thaps23697;rank=2 chr8 . CDS 260773 262958 . - 0 ID=Thaps23697;Parent=Thaps23697;rank=1 chr8 ensembl protein_coding_gene 250980 251933 . - . ID=Thaps7445;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6J2];external_name=Thaps7445;logic_name=jgi_thaps3 chr8 ensembl transcript 250980 251933 . - . ID=Thaps7445;Parent=Thaps7445;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 250980 251933 . - 0 ID=Thaps7445;Parent=Thaps7445;rank=1 chr8 . exon 250980 251933 . - . ID=Thaps7445.1;Parent=Thaps7445;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 253643 255064 . - . ID=Thaps7446;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6J3];external_name=Thaps7446;logic_name=jgi_thaps3 chr8 ensembl transcript 253643 255064 . - . ID=Thaps7446;Parent=Thaps7446;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 253643 253729 . - 0 ID=Thaps7446;Parent=Thaps7446;rank=3 chr8 . exon 253643 253729 . - . ID=Thaps7446.3;Parent=Thaps7446;constitutive=1;rank=3 chr8 . CDS 253817 254286 . - 0 ID=Thaps7446;Parent=Thaps7446;rank=2 chr8 . exon 253817 254286 . - . ID=Thaps7446.2;Parent=Thaps7446;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 254464 255064 . - 0 ID=Thaps7446;Parent=Thaps7446;rank=1 chr8 . exon 254464 255064 . - . ID=Thaps7446.1;Parent=Thaps7446;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . repeat_region 262025 262055 . ? . description=trf chr8 . exon 259760 260697 . - . ID=Thaps23697.2;Parent=Thaps23697;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . exon 260773 262958 . - . ID=Thaps23697.1;Parent=Thaps23697;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 264133 265530 . - . ID=Thaps23698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6J6];external_name=Thaps23698;logic_name=jgi_thaps3 chr8 ensembl transcript 264133 265530 . - . ID=Thaps23698;Parent=Thaps23698;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 264133 264376 . - 0 ID=Thaps23698;Parent=Thaps23698;rank=3 chr8 . exon 264133 264376 . - . ID=Thaps23698.3;Parent=Thaps23698;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 264441 265179 . - 0 ID=Thaps23698;Parent=Thaps23698;rank=2 chr8 . exon 264441 265179 . - . ID=Thaps23698.2;Parent=Thaps23698;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 265287 265530 . - 0 ID=Thaps23698;Parent=Thaps23698;rank=1 chr8 . exon 265287 265530 . - . ID=Thaps23698.1;Parent=Thaps23698;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 269395 271402 . + . ID=Thaps269333;biotype=protein_coding;description=Peptide transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C6J9];external_name=Thaps269333;logic_name=jgi_thaps3 chr8 ensembl transcript 269395 271402 . + . ID=Thaps269333;Parent=Thaps269333;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 269395 269929 . + 0 ID=Thaps269333;Parent=Thaps269333;rank=1 chr8 . exon 269395 269929 . + . ID=Thaps269333.1;Parent=Thaps269333;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 270000 270097 . + 0 ID=Thaps269333;Parent=Thaps269333;rank=2 chr8 . CDS 270170 270441 . + 0 ID=Thaps269333;Parent=Thaps269333;rank=3 chr8 . CDS 270529 271402 . + 0 ID=Thaps269333;Parent=Thaps269333;rank=4 chr8 ensembl protein_coding_gene 263335 264141 . + . ID=Thaps7448;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6J5];external_name=Thaps7448;logic_name=jgi_thaps3 chr8 ensembl transcript 263335 264141 . + . ID=Thaps7448;Parent=Thaps7448;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 263335 264141 . + 0 ID=Thaps7448;Parent=Thaps7448;rank=1 chr8 . exon 263335 264141 . + . ID=Thaps7448.1;Parent=Thaps7448;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 265741 267387 . + . ID=Thaps7450;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6J7];external_name=Thaps7450;logic_name=jgi_thaps3 chr8 ensembl transcript 265741 267387 . + . ID=Thaps7450;Parent=Thaps7450;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 265741 267387 . + 0 ID=Thaps7450;Parent=Thaps7450;rank=1 chr8 . exon 265741 267387 . + . ID=Thaps7450.1;Parent=Thaps7450;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 267541 268332 . - . ID=Thaps7451;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6J8];external_name=Thaps7451;logic_name=jgi_thaps3 chr8 ensembl transcript 267541 268332 . - . ID=Thaps7451;Parent=Thaps7451;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 267541 268020 . - 0 ID=Thaps7451;Parent=Thaps7451;rank=2 chr8 . exon 267541 268020 . - . ID=Thaps7451.2;Parent=Thaps7451;constitutive=1;rank=2 chr8 . CDS 268081 268332 . - 0 ID=Thaps7451;Parent=Thaps7451;rank=1 chr8 . exon 268081 268332 . - . ID=Thaps7451.1;Parent=Thaps7451;constitutive=1;rank=1 chr8 . repeat_region 271634 271670 . ? . description=dust chr8 ensembl protein_coding_gene 274034 277825 . - . ID=Thaps23700;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K1];external_name=Thaps23700;logic_name=jgi_thaps3 chr8 ensembl transcript 274034 277825 . - . ID=Thaps23700;Parent=Thaps23700;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 274034 275005 . - 0 ID=Thaps23700;Parent=Thaps23700;rank=7 chr8 . exon 274034 275005 . - . ID=Thaps23700.7;Parent=Thaps23700;constitutive=1;rank=7 chr8 . CDS 275083 275700 . - 0 ID=Thaps23700;Parent=Thaps23700;rank=6 chr8 . exon 275083 275700 . - . ID=Thaps23700.6;Parent=Thaps23700;constitutive=1;rank=6 chr8 . CDS 275780 275905 . - 0 ID=Thaps23700;Parent=Thaps23700;rank=5 chr8 . exon 275780 275905 . - . ID=Thaps23700.5;Parent=Thaps23700;constitutive=1;rank=5 chr8 . CDS 275992 276086 . - 0 ID=Thaps23700;Parent=Thaps23700;rank=4 chr8 . exon 275992 276086 . - . ID=Thaps23700.4;Parent=Thaps23700;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 276171 276291 . - 0 ID=Thaps23700;Parent=Thaps23700;rank=3 chr8 . exon 276171 276291 . - . ID=Thaps23700.3;Parent=Thaps23700;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 276378 277773 . - 0 ID=Thaps23700;Parent=Thaps23700;rank=2 chr8 . exon 276378 277773 . - . ID=Thaps23700.2;Parent=Thaps23700;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 277803 277825 . - 0 ID=Thaps23700;Parent=Thaps23700;rank=1 chr8 . exon 277803 277825 . - . ID=Thaps23700.1;Parent=Thaps23700;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 278731 279504 . + . ID=Thaps23701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K2];external_name=Thaps23701;logic_name=jgi_thaps3 chr8 ensembl transcript 278731 279504 . + . ID=Thaps23701;Parent=Thaps23701;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 278731 279504 . + 0 ID=Thaps23701;Parent=Thaps23701;rank=1 chr8 . exon 278731 279504 . + . ID=Thaps23701.1;Parent=Thaps23701;constitutive=1;rank=1 chr8 . exon 270000 270097 . + . ID=Thaps269333.2;Parent=Thaps269333;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . exon 270170 270441 . + . ID=Thaps269333.3;Parent=Thaps269333;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . exon 270529 271402 . + . ID=Thaps269333.4;Parent=Thaps269333;constitutive=1;ensembl_end_phase=1;rank=4 chr8 ensembl protein_coding_gene 271896 273146 . + . ID=Thaps7453;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K0];external_name=Thaps7453;logic_name=jgi_thaps3 chr8 ensembl transcript 271896 273146 . + . ID=Thaps7453;Parent=Thaps7453;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 271896 273146 . + 0 ID=Thaps7453;Parent=Thaps7453;rank=1 chr8 . exon 271896 273146 . + . ID=Thaps7453.1;Parent=Thaps7453;constitutive=1;rank=1 chr8 . repeat_region 280557 280586 . ? . description=trf chr8 ensembl protein_coding_gene 279871 280716 . + . ID=Thaps23702;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K3];external_name=Thaps23702;logic_name=jgi_thaps3 chr8 ensembl transcript 279871 280716 . + . ID=Thaps23702;Parent=Thaps23702;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 279871 280716 . + 0 ID=Thaps23702;Parent=Thaps23702;rank=1 chr8 . exon 279871 280716 . + . ID=Thaps23702.1;Parent=Thaps23702;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 283796 285577 . + . ID=Thaps23704;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K5];external_name=Thaps23704;logic_name=jgi_thaps3 chr8 ensembl transcript 283796 285577 . + . ID=Thaps23704;Parent=Thaps23704;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 283796 285577 . + 0 ID=Thaps23704;Parent=Thaps23704;rank=1 chr8 . exon 283796 285577 . + . ID=Thaps23704.1;Parent=Thaps23704;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 287839 288519 . - . ID=Thaps263354;biotype=protein_coding;description=Urease accessory protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K7];external_name=Thaps263354;logic_name=jgi_thaps3 chr8 ensembl transcript 287839 288519 . - . ID=Thaps263354;Parent=Thaps263354;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 287839 288215 . - 0 ID=Thaps263354;Parent=Thaps263354;rank=2 chr8 . exon 287839 288215 . - . ID=Thaps263354.2;Parent=Thaps263354;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 288246 288519 . - 0 ID=Thaps263354;Parent=Thaps263354;rank=1 chr8 . exon 288246 288519 . - . ID=Thaps263354.1;Parent=Thaps263354;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 282097 283400 . - . ID=Thaps7458;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K4];external_name=Thaps7458;logic_name=jgi_thaps3 chr8 ensembl transcript 282097 283400 . - . ID=Thaps7458;Parent=Thaps7458;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 282097 283196 . - 0 ID=Thaps7458;Parent=Thaps7458;rank=2 chr8 . exon 282097 283196 . - . ID=Thaps7458.2;Parent=Thaps7458;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 283223 283400 . - 0 ID=Thaps7458;Parent=Thaps7458;rank=1 chr8 . exon 283223 283400 . - . ID=Thaps7458.1;Parent=Thaps7458;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 286152 287507 . + . ID=Thaps7460;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K6];external_name=Thaps7460;logic_name=jgi_thaps3 chr8 ensembl transcript 286152 287507 . + . ID=Thaps7460;Parent=Thaps7460;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 286152 287507 . + 0 ID=Thaps7460;Parent=Thaps7460;rank=1 chr8 . exon 286152 287507 . + . ID=Thaps7460.1;Parent=Thaps7460;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 289152 290645 . + . ID=Thaps7462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K8];external_name=Thaps7462;logic_name=jgi_thaps3 chr8 ensembl transcript 289152 290645 . + . ID=Thaps7462;Parent=Thaps7462;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 289152 290645 . + 0 ID=Thaps7462;Parent=Thaps7462;rank=1 chr8 . exon 289152 290645 . + . ID=Thaps7462.1;Parent=Thaps7462;constitutive=1;rank=1 chr8 . repeat_region 296230 296272 . ? . description=dust chr8 ensembl protein_coding_gene 292385 292864 . + . ID=Thaps23705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6K9];external_name=Thaps23705;logic_name=jgi_thaps3 chr8 ensembl transcript 292385 292864 . + . ID=Thaps23705;Parent=Thaps23705;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 292385 292864 . + 0 ID=Thaps23705;Parent=Thaps23705;rank=1 chr8 . exon 292385 292864 . + . ID=Thaps23705.1;Parent=Thaps23705;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 293362 295462 . - . ID=Thaps23706;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L0];external_name=Thaps23706;logic_name=jgi_thaps3 chr8 ensembl transcript 293362 295462 . - . ID=Thaps23706;Parent=Thaps23706;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 293362 294296 . - 0 ID=Thaps23706;Parent=Thaps23706;rank=4 chr8 . exon 293362 294296 . - . ID=Thaps23706.4;Parent=Thaps23706;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 294384 294585 . - 0 ID=Thaps23706;Parent=Thaps23706;rank=3 chr8 . exon 294384 294585 . - . ID=Thaps23706.3;Parent=Thaps23706;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 294674 294792 . - 0 ID=Thaps23706;Parent=Thaps23706;rank=2 chr8 . exon 294674 294792 . - . ID=Thaps23706.2;Parent=Thaps23706;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 294868 295462 . - 0 ID=Thaps23706;Parent=Thaps23706;rank=1 chr8 . exon 294868 295462 . - . ID=Thaps23706.1;Parent=Thaps23706;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl gene 297808 301112 . - . ID=Thaps263355;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr8 ensembl transcript 297808 301112 . - . ID=Thaps263355;Parent=Thaps263355;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr8 . exon 297808 298791 . - . ID=Thaps263355.8;Parent=Thaps263355;constitutive=1;rank=8 chr8 . exon 298866 299085 . - . ID=Thaps263355.7;Parent=Thaps263355;constitutive=1;ensembl_end_phase=1;rank=7 chr8 . exon 299217 299809 . - . ID=Thaps263355.6;Parent=Thaps263355;constitutive=1;ensembl_end_phase=2;rank=6 chr8 . repeat_region 299827 299847 . ? . description=trf chr8 . repeat_region 301425 301503 . + . description=MuDR1_TP chr8 . repeat_region 303761 303825 . ? . description=trf chr8 ensembl protein_coding_gene 304033 308877 . + . ID=Thaps23707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L2];external_name=Thaps23707;logic_name=jgi_thaps3 chr8 ensembl transcript 304033 308877 . + . ID=Thaps23707;Parent=Thaps23707;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 304033 304369 . + 0 ID=Thaps23707;Parent=Thaps23707;rank=1 chr8 . exon 304033 304369 . + . ID=Thaps23707.1;Parent=Thaps23707;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 304570 306394 . + 0 ID=Thaps23707;Parent=Thaps23707;rank=2 chr8 . exon 304570 306394 . + . ID=Thaps23707.2;Parent=Thaps23707;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 306488 306938 . + 0 ID=Thaps23707;Parent=Thaps23707;rank=3 chr8 . exon 306488 306938 . + . ID=Thaps23707.3;Parent=Thaps23707;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 307029 308214 . + 0 ID=Thaps23707;Parent=Thaps23707;rank=4 chr8 . exon 307029 308214 . + . ID=Thaps23707.4;Parent=Thaps23707;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 308291 308877 . + 0 ID=Thaps23707;Parent=Thaps23707;rank=5 chr8 . exon 308291 308877 . + . ID=Thaps23707.5;Parent=Thaps23707;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . exon 299849 299933 . - . ID=Thaps263355.5;Parent=Thaps263355;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . exon 299998 300182 . - . ID=Thaps263355.4;Parent=Thaps263355;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . exon 300272 300554 . - . ID=Thaps263355.3;Parent=Thaps263355;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . exon 300624 300727 . - . ID=Thaps263355.2;Parent=Thaps263355;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . exon 300794 301112 . - . ID=Thaps263355.1;Parent=Thaps263355;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 308939 309985 . - . ID=Thaps35956;biotype=protein_coding;description=Sir2-like transcriptional regulatory protein found in-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L3];external_name=Thaps35956;logic_name=jgi_thaps3 chr8 ensembl transcript 308939 309985 . - . ID=Thaps35956;Parent=Thaps35956;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 308939 309576 . - 0 ID=Thaps35956;Parent=Thaps35956;rank=4 chr8 . exon 308939 309576 . - . ID=Thaps35956.4;Parent=Thaps35956;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 309643 309670 . - 0 ID=Thaps35956;Parent=Thaps35956;rank=3 chr8 . CDS 309750 309792 . - 0 ID=Thaps35956;Parent=Thaps35956;rank=2 chr8 . CDS 309867 309985 . - 0 ID=Thaps35956;Parent=Thaps35956;rank=1 chr8 ensembl protein_coding_gene 301690 303698 . + . ID=Thaps7466;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L1];external_name=Thaps7466;logic_name=jgi_thaps3 chr8 ensembl transcript 301690 303698 . + . ID=Thaps7466;Parent=Thaps7466;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 301690 301762 . + 0 ID=Thaps7466;Parent=Thaps7466;rank=1 chr8 . exon 301690 301762 . + . ID=Thaps7466.1;Parent=Thaps7466;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 301889 301935 . + 0 ID=Thaps7466;Parent=Thaps7466;rank=2 chr8 . exon 301889 301935 . + . ID=Thaps7466.2;Parent=Thaps7466;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 302049 303698 . + 0 ID=Thaps7466;Parent=Thaps7466;rank=3 chr8 . exon 302049 303698 . + . ID=Thaps7466.3;Parent=Thaps7466;constitutive=1;rank=3 chr8 . repeat_region 314705 314822 . ? . description=dust chr8 ensembl protein_coding_gene 317165 318463 . + . ID=Thaps269335;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L7];external_name=Thaps269335;logic_name=jgi_thaps3 chr8 ensembl transcript 317165 318463 . + . ID=Thaps269335;Parent=Thaps269335;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 317165 318463 . + 0 ID=Thaps269335;Parent=Thaps269335;rank=1 chr8 . exon 317165 318463 . + . ID=Thaps269335.1;Parent=Thaps269335;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 311876 312448 . - . ID=Thaps35934;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L5];external_name=Thaps35934;logic_name=jgi_thaps3 chr8 ensembl transcript 311876 312448 . - . ID=Thaps35934;Parent=Thaps35934;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 311876 312208 . - 0 ID=Thaps35934;Parent=Thaps35934;rank=2 chr8 . exon 311876 312208 . - . ID=Thaps35934.2;Parent=Thaps35934;constitutive=1;rank=2 chr8 . CDS 312380 312448 . - 0 ID=Thaps35934;Parent=Thaps35934;rank=1 chr8 . exon 312380 312448 . - . ID=Thaps35934.1;Parent=Thaps35934;constitutive=1;rank=1 chr8 . exon 309643 309670 . - . ID=Thaps35956.3;Parent=Thaps35956;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . exon 309750 309792 . - . ID=Thaps35956.2;Parent=Thaps35956;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . exon 309867 309985 . - . ID=Thaps35956.1;Parent=Thaps35956;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 310367 311468 . + . ID=Thaps7469;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L4];external_name=Thaps7469;logic_name=jgi_thaps3 chr8 ensembl transcript 310367 311468 . + . ID=Thaps7469;Parent=Thaps7469;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 310367 310484 . + 0 ID=Thaps7469;Parent=Thaps7469;rank=1 chr8 . exon 310367 310484 . + . ID=Thaps7469.1;Parent=Thaps7469;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 310657 310829 . + 0 ID=Thaps7469;Parent=Thaps7469;rank=2 chr8 . exon 310657 310829 . + . ID=Thaps7469.2;Parent=Thaps7469;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 310962 311468 . + 0 ID=Thaps7469;Parent=Thaps7469;rank=3 chr8 . exon 310962 311468 . + . ID=Thaps7469.3;Parent=Thaps7469;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 314191 316771 . - . ID=Thaps7471;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L6];external_name=Thaps7471;logic_name=jgi_thaps3 chr8 ensembl transcript 314191 316771 . - . ID=Thaps7471;Parent=Thaps7471;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 314191 314396 . - 0 ID=Thaps7471;Parent=Thaps7471;rank=7 chr8 . exon 314191 314396 . - . ID=Thaps7471.7;Parent=Thaps7471;constitutive=1;ensembl_end_phase=2;rank=7 chr8 . CDS 314421 314644 . - 0 ID=Thaps7471;Parent=Thaps7471;rank=6 chr8 . exon 314421 314644 . - . ID=Thaps7471.6;Parent=Thaps7471;constitutive=1;ensembl_end_phase=2;rank=6 chr8 . CDS 314835 314864 . - 0 ID=Thaps7471;Parent=Thaps7471;rank=5 chr8 . exon 314835 314864 . - . ID=Thaps7471.5;Parent=Thaps7471;constitutive=1;rank=5 chr8 . CDS 314942 315131 . - 0 ID=Thaps7471;Parent=Thaps7471;rank=4 chr8 . exon 314942 315131 . - . ID=Thaps7471.4;Parent=Thaps7471;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 315209 315835 . - 0 ID=Thaps7471;Parent=Thaps7471;rank=3 chr8 . exon 315209 315835 . - . ID=Thaps7471.3;Parent=Thaps7471;constitutive=1;rank=3 chr8 . CDS 315917 315954 . - 0 ID=Thaps7471;Parent=Thaps7471;rank=2 chr8 . exon 315917 315954 . - . ID=Thaps7471.2;Parent=Thaps7471;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 316026 316771 . - 0 ID=Thaps7471;Parent=Thaps7471;rank=1 chr8 . exon 316026 316771 . - . ID=Thaps7471.1;Parent=Thaps7471;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 320440 321276 . + . ID=Thaps263360;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L8];external_name=Thaps263360;logic_name=jgi_thaps3 chr8 ensembl transcript 320440 321276 . + . ID=Thaps263360;Parent=Thaps263360;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 320440 320614 . + 0 ID=Thaps263360;Parent=Thaps263360;rank=1 chr8 . exon 320440 320614 . + . ID=Thaps263360.1;Parent=Thaps263360;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 320642 320967 . + 0 ID=Thaps263360;Parent=Thaps263360;rank=2 chr8 . exon 320642 320967 . + . ID=Thaps263360.2;Parent=Thaps263360;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 321052 321276 . + 0 ID=Thaps263360;Parent=Thaps263360;rank=3 chr8 . exon 321052 321276 . + . ID=Thaps263360.3;Parent=Thaps263360;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 325629 326496 . - . ID=Thaps263361;biotype=protein_coding;description=Adenylate cyclase [Source:UniProtKB/TrEMBL%3BAcc:B8C6M1];external_name=Thaps263361;logic_name=jgi_thaps3 chr8 ensembl transcript 325629 326496 . - . ID=Thaps263361;Parent=Thaps263361;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 325629 325840 . - 0 ID=Thaps263361;Parent=Thaps263361;rank=2 chr8 . exon 325629 325840 . - . ID=Thaps263361.2;Parent=Thaps263361;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 325924 326496 . - 0 ID=Thaps263361;Parent=Thaps263361;rank=1 chr8 . exon 325924 326496 . - . ID=Thaps263361.1;Parent=Thaps263361;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 327954 329232 . - . ID=Thaps36053;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6M2];external_name=Thaps36053;logic_name=jgi_thaps3 chr8 ensembl transcript 327954 329232 . - . ID=Thaps36053;Parent=Thaps36053;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 327954 328214 . - 0 ID=Thaps36053;Parent=Thaps36053;rank=3 chr8 . exon 327954 328214 . - . ID=Thaps36053.3;Parent=Thaps36053;constitutive=1;rank=3 chr8 . CDS 328294 328691 . - 0 ID=Thaps36053;Parent=Thaps36053;rank=2 chr8 . exon 328294 328691 . - . ID=Thaps36053.2;Parent=Thaps36053;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 328791 329232 . - 0 ID=Thaps36053;Parent=Thaps36053;rank=1 chr8 . exon 328791 329232 . - . ID=Thaps36053.1;Parent=Thaps36053;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 322916 323671 . + . ID=Thaps7474;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6L9];external_name=Thaps7474;logic_name=jgi_thaps3 chr8 ensembl transcript 322916 323671 . + . ID=Thaps7474;Parent=Thaps7474;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 322916 323671 . + 0 ID=Thaps7474;Parent=Thaps7474;rank=1 chr8 . exon 322916 323671 . + . ID=Thaps7474.1;Parent=Thaps7474;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 324038 325509 . + . ID=Thaps7475;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6M0];external_name=Thaps7475;logic_name=jgi_thaps3 chr8 ensembl transcript 324038 325509 . + . ID=Thaps7475;Parent=Thaps7475;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 324038 324580 . + 0 ID=Thaps7475;Parent=Thaps7475;rank=1 chr8 . exon 324038 324580 . + . ID=Thaps7475.1;Parent=Thaps7475;constitutive=1;rank=1 chr8 . CDS 324661 325068 . + 0 ID=Thaps7475;Parent=Thaps7475;rank=2 chr8 . exon 324661 325068 . + . ID=Thaps7475.2;Parent=Thaps7475;constitutive=1;rank=2 chr8 . CDS 325192 325509 . + 0 ID=Thaps7475;Parent=Thaps7475;rank=3 chr8 . exon 325192 325509 . + . ID=Thaps7475.3;Parent=Thaps7475;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 329672 329937 . - . ID=Thaps263363;biotype=protein_coding;description=Ankyrin domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6M3];external_name=Thaps263363;logic_name=jgi_thaps3 chr8 ensembl transcript 329672 329937 . - . ID=Thaps263363;Parent=Thaps263363;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 329672 329937 . - 0 ID=Thaps263363;Parent=Thaps263363;rank=1 chr8 . exon 329672 329937 . - . ID=Thaps263363.1;Parent=Thaps263363;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 331090 332208 . - . ID=Thaps7478;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6M4];external_name=Thaps7478;logic_name=jgi_thaps3 chr8 ensembl transcript 331090 332208 . - . ID=Thaps7478;Parent=Thaps7478;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 331090 332208 . - 0 ID=Thaps7478;Parent=Thaps7478;rank=1 chr8 . exon 331090 332208 . - . ID=Thaps7478.1;Parent=Thaps7478;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 332696 335113 . + . ID=Thaps7479;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6M5];external_name=Thaps7479;logic_name=jgi_thaps3 chr8 ensembl transcript 332696 335113 . + . ID=Thaps7479;Parent=Thaps7479;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 332696 335113 . + 0 ID=Thaps7479;Parent=Thaps7479;rank=1 chr8 . exon 332696 335113 . + . ID=Thaps7479.1;Parent=Thaps7479;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 335644 339123 . + . ID=Thaps7480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6M6];external_name=Thaps7480;logic_name=jgi_thaps3 chr8 ensembl transcript 335644 339123 . + . ID=Thaps7480;Parent=Thaps7480;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 335644 339123 . + 0 ID=Thaps7480;Parent=Thaps7480;rank=1 chr8 . exon 335644 339123 . + . ID=Thaps7480.1;Parent=Thaps7480;constitutive=1;rank=1 chr8 . repeat_region 344081 344141 . ? . description=dust chr8 ensembl protein_coding_gene 346824 347567 . + . ID=Thaps263365;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6M9];external_name=Thaps263365;logic_name=jgi_thaps3 chr8 ensembl transcript 346824 347567 . + . ID=Thaps263365;Parent=Thaps263365;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 346824 347567 . + 0 ID=Thaps263365;Parent=Thaps263365;rank=1 chr8 . exon 346824 347567 . + . ID=Thaps263365.1;Parent=Thaps263365;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 339846 341402 . - . ID=Thaps41505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6M7];external_name=Thaps41505;logic_name=jgi_thaps3 chr8 ensembl transcript 339846 341402 . - . ID=Thaps41505;Parent=Thaps41505;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 339846 341402 . - 0 ID=Thaps41505;Parent=Thaps41505;rank=1 chr8 . exon 339846 341402 . - . ID=Thaps41505.1;Parent=Thaps41505;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 342964 343959 . - . ID=Thaps7482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6M8];external_name=Thaps7482;logic_name=jgi_thaps3 chr8 ensembl transcript 342964 343959 . - . ID=Thaps7482;Parent=Thaps7482;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 342964 343959 . - 0 ID=Thaps7482;Parent=Thaps7482;rank=1 chr8 . exon 342964 343959 . - . ID=Thaps7482.1;Parent=Thaps7482;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 347835 351642 . - . ID=Thaps7484;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6N0];external_name=Thaps7484;logic_name=jgi_thaps3 chr8 ensembl transcript 347835 351642 . - . ID=Thaps7484;Parent=Thaps7484;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 347835 348505 . - 0 ID=Thaps7484;Parent=Thaps7484;rank=3 chr8 . exon 347835 348505 . - . ID=Thaps7484.3;Parent=Thaps7484;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 348589 349672 . - 0 ID=Thaps7484;Parent=Thaps7484;rank=2 chr8 . exon 348589 349672 . - . ID=Thaps7484.2;Parent=Thaps7484;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 349747 351642 . - 0 ID=Thaps7484;Parent=Thaps7484;rank=1 chr8 ensembl protein_coding_gene 355746 356249 . - . ID=Thaps18190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6N2];external_name=Thaps18190;logic_name=jgi_thaps3 chr8 ensembl transcript 355746 356249 . - . ID=Thaps18190;Parent=Thaps18190;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 355746 356249 . - 0 ID=Thaps18190;Parent=Thaps18190;rank=1 chr8 . exon 355746 356249 . - . ID=Thaps18190.1;Parent=Thaps18190;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 353918 355203 . + . ID=Thaps263366;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6N1];external_name=Thaps263366;logic_name=jgi_thaps3 chr8 ensembl transcript 353918 355203 . + . ID=Thaps263366;Parent=Thaps263366;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 353918 354021 . + 0 ID=Thaps263366;Parent=Thaps263366;rank=1 chr8 . exon 353918 354021 . + . ID=Thaps263366.1;Parent=Thaps263366;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 354250 354493 . + 0 ID=Thaps263366;Parent=Thaps263366;rank=2 chr8 . exon 354250 354493 . + . ID=Thaps263366.2;Parent=Thaps263366;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 354572 354818 . + 0 ID=Thaps263366;Parent=Thaps263366;rank=3 chr8 . exon 354572 354818 . + . ID=Thaps263366.3;Parent=Thaps263366;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 354895 355203 . + 0 ID=Thaps263366;Parent=Thaps263366;rank=4 chr8 . exon 354895 355203 . + . ID=Thaps263366.4;Parent=Thaps263366;constitutive=1;rank=4 chr8 . exon 349747 351642 . - . ID=Thaps7484.1;Parent=Thaps7484;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 357822 359309 . - . ID=Thaps7487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6N3];external_name=Thaps7487;logic_name=jgi_thaps3 chr8 ensembl transcript 357822 359309 . - . ID=Thaps7487;Parent=Thaps7487;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 357822 359309 . - 0 ID=Thaps7487;Parent=Thaps7487;rank=1 chr8 . exon 357822 359309 . - . ID=Thaps7487.1;Parent=Thaps7487;constitutive=1;rank=1 chr8 . repeat_region 366984 367005 . ? . description=trf chr8 . repeat_region 366984 367005 . ? . description=dust chr8 . repeat_region 369066 369096 . ? . description=trf chr8 . repeat_region 369066 369096 . ? . description=dust chr8 ensembl protein_coding_gene 368409 369059 . - . ID=Thaps18089;biotype=protein_coding;description=Peroxiredoxin [Source:UniProtKB/TrEMBL%3BAcc:B8C6N8];external_name=Thaps18089;logic_name=jgi_thaps3 chr8 ensembl transcript 368409 369059 . - . ID=Thaps18089;Parent=Thaps18089;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 368409 369059 . - 0 ID=Thaps18089;Parent=Thaps18089;rank=1 chr8 . exon 368409 369059 . - . ID=Thaps18089.1;Parent=Thaps18089;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 359612 362032 . + . ID=Thaps23714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6N4];external_name=Thaps23714;logic_name=jgi_thaps3 chr8 ensembl transcript 359612 362032 . + . ID=Thaps23714;Parent=Thaps23714;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 359612 362032 . + 0 ID=Thaps23714;Parent=Thaps23714;rank=1 chr8 . exon 359612 362032 . + . ID=Thaps23714.1;Parent=Thaps23714;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 365255 366520 . - . ID=Thaps23716;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6N6];external_name=Thaps23716;logic_name=jgi_thaps3 chr8 ensembl transcript 365255 366520 . - . ID=Thaps23716;Parent=Thaps23716;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 365255 366520 . - 0 ID=Thaps23716;Parent=Thaps23716;rank=1 chr8 . exon 365255 366520 . - . ID=Thaps23716.1;Parent=Thaps23716;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 363978 365051 . + . ID=Thaps35798;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6N5];external_name=Thaps35798;logic_name=jgi_thaps3 chr8 ensembl transcript 363978 365051 . + . ID=Thaps35798;Parent=Thaps35798;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 363978 364326 . + 0 ID=Thaps35798;Parent=Thaps35798;rank=1 chr8 . exon 363978 364326 . + . ID=Thaps35798.1;Parent=Thaps35798;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 364531 365051 . + 0 ID=Thaps35798;Parent=Thaps35798;rank=2 chr8 . exon 364531 365051 . + . ID=Thaps35798.2;Parent=Thaps35798;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 366806 367870 . + . ID=Thaps7491;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6N7];external_name=Thaps7491;logic_name=jgi_thaps3 chr8 ensembl transcript 366806 367870 . + . ID=Thaps7491;Parent=Thaps7491;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 366806 367870 . + 0 ID=Thaps7491;Parent=Thaps7491;rank=1 chr8 . exon 366806 367870 . + . ID=Thaps7491.1;Parent=Thaps7491;constitutive=1;rank=1 chr8 . repeat_region 373912 374009 . + . description=Copia6LTR_TP chr8 ensembl protein_coding_gene 372614 373471 . - . ID=Thaps23718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6P0];external_name=Thaps23718;logic_name=jgi_thaps3 chr8 ensembl transcript 372614 373471 . - . ID=Thaps23718;Parent=Thaps23718;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 372614 373471 . - 0 ID=Thaps23718;Parent=Thaps23718;rank=1 chr8 . exon 372614 373471 . - . ID=Thaps23718.1;Parent=Thaps23718;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 378067 379446 . + . ID=Thaps23719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6P3];external_name=Thaps23719;logic_name=jgi_thaps3 chr8 ensembl transcript 378067 379446 . + . ID=Thaps23719;Parent=Thaps23719;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 378067 378906 . + 0 ID=Thaps23719;Parent=Thaps23719;rank=1 chr8 . exon 378067 378906 . + . ID=Thaps23719.1;Parent=Thaps23719;constitutive=1;rank=1 chr8 . CDS 379003 379446 . + 0 ID=Thaps23719;Parent=Thaps23719;rank=2 chr8 . exon 379003 379446 . + . ID=Thaps23719.2;Parent=Thaps23719;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 374810 375361 . + . ID=Thaps263371;biotype=protein_coding;description=Histidine triad-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6P1];external_name=Thaps263371;logic_name=jgi_thaps3 chr8 ensembl transcript 374810 375361 . + . ID=Thaps263371;Parent=Thaps263371;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 374810 374938 . + 0 ID=Thaps263371;Parent=Thaps263371;rank=1 chr8 . exon 374810 374938 . + . ID=Thaps263371.1;Parent=Thaps263371;constitutive=1;rank=1 chr8 . CDS 374978 375361 . + 0 ID=Thaps263371;Parent=Thaps263371;rank=2 chr8 . exon 374978 375361 . + . ID=Thaps263371.2;Parent=Thaps263371;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 371323 372546 . + . ID=Thaps7493;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6N9];external_name=Thaps7493;logic_name=jgi_thaps3 chr8 ensembl transcript 371323 372546 . + . ID=Thaps7493;Parent=Thaps7493;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 371323 372546 . + 0 ID=Thaps7493;Parent=Thaps7493;rank=1 chr8 . exon 371323 372546 . + . ID=Thaps7493.1;Parent=Thaps7493;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 375437 377514 . - . ID=Thaps7495;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6P2];external_name=Thaps7495;logic_name=jgi_thaps3 chr8 ensembl transcript 375437 377514 . - . ID=Thaps7495;Parent=Thaps7495;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 375437 375645 . - 0 ID=Thaps7495;Parent=Thaps7495;rank=6 chr8 . exon 375437 375645 . - . ID=Thaps7495.6;Parent=Thaps7495;constitutive=1;ensembl_end_phase=2;rank=6 chr8 . CDS 375670 375898 . - 0 ID=Thaps7495;Parent=Thaps7495;rank=5 chr8 . exon 375670 375898 . - . ID=Thaps7495.5;Parent=Thaps7495;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 375975 375999 . - 0 ID=Thaps7495;Parent=Thaps7495;rank=4 chr8 . exon 375975 375999 . - . ID=Thaps7495.4;Parent=Thaps7495;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 376078 376846 . - 0 ID=Thaps7495;Parent=Thaps7495;rank=3 chr8 . exon 376078 376846 . - . ID=Thaps7495.3;Parent=Thaps7495;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 376926 376963 . - 0 ID=Thaps7495;Parent=Thaps7495;rank=2 chr8 . exon 376926 376963 . - . ID=Thaps7495.2;Parent=Thaps7495;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 377039 377514 . - 0 ID=Thaps7495;Parent=Thaps7495;rank=1 chr8 . exon 377039 377514 . - . ID=Thaps7495.1;Parent=Thaps7495;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . repeat_region 383521 383545 . ? . description=dust chr8 . repeat_region 383522 383546 . ? . description=trf chr8 . repeat_region 388251 388282 . ? . description=trf chr8 . biological_region 388462 388464 0.999 - . logic_name=eponine chr8 ensembl protein_coding_gene 380631 381650 . + . ID=Thaps23720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6P5];external_name=Thaps23720;logic_name=jgi_thaps3 chr8 ensembl transcript 380631 381650 . + . ID=Thaps23720;Parent=Thaps23720;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 380631 381650 . + 0 ID=Thaps23720;Parent=Thaps23720;rank=1 chr8 . exon 380631 381650 . + . ID=Thaps23720.1;Parent=Thaps23720;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 388326 389240 . + . ID=Thaps23724;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6P9];external_name=Thaps23724;logic_name=jgi_thaps3 chr8 ensembl transcript 388326 389240 . + . ID=Thaps23724;Parent=Thaps23724;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 388326 389240 . + 0 ID=Thaps23724;Parent=Thaps23724;rank=1 chr8 . exon 388326 389240 . + . ID=Thaps23724.1;Parent=Thaps23724;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 386779 387645 . - . ID=Thaps263374;biotype=protein_coding;description=Fructokinase [Source:UniProtKB/TrEMBL%3BAcc:B8C6P8];external_name=Thaps263374;logic_name=jgi_thaps3 chr8 ensembl transcript 386779 387645 . - . ID=Thaps263374;Parent=Thaps263374;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 386779 386865 . - 0 ID=Thaps263374;Parent=Thaps263374;rank=4 chr8 . exon 386779 386865 . - . ID=Thaps263374.4;Parent=Thaps263374;constitutive=1;rank=4 chr8 . CDS 386887 387130 . - 0 ID=Thaps263374;Parent=Thaps263374;rank=3 chr8 . exon 386887 387130 . - . ID=Thaps263374.3;Parent=Thaps263374;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 387206 387380 . - 0 ID=Thaps263374;Parent=Thaps263374;rank=2 chr8 . exon 387206 387380 . - . ID=Thaps263374.2;Parent=Thaps263374;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 387429 387645 . - 0 ID=Thaps263374;Parent=Thaps263374;rank=1 chr8 . exon 387429 387645 . - . ID=Thaps263374.1;Parent=Thaps263374;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 385371 386435 . + . ID=Thaps269341;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6P7];external_name=Thaps269341;logic_name=jgi_thaps3 chr8 ensembl transcript 385371 386435 . + . ID=Thaps269341;Parent=Thaps269341;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 385371 385989 . + 0 ID=Thaps269341;Parent=Thaps269341;rank=1 chr8 . exon 385371 385989 . + . ID=Thaps269341.1;Parent=Thaps269341;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 386125 386435 . + 0 ID=Thaps269341;Parent=Thaps269341;rank=2 chr8 . exon 386125 386435 . + . ID=Thaps269341.2;Parent=Thaps269341;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 383920 384615 . + . ID=Thaps35780;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6P6];external_name=Thaps35780;logic_name=jgi_thaps3 chr8 ensembl transcript 383920 384615 . + . ID=Thaps35780;Parent=Thaps35780;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 383920 384615 . + 0 ID=Thaps35780;Parent=Thaps35780;rank=1 chr8 . exon 383920 384615 . + . ID=Thaps35780.1;Parent=Thaps35780;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 379593 380426 . - . ID=Thaps7497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6P4];external_name=Thaps7497;logic_name=jgi_thaps3 chr8 ensembl transcript 379593 380426 . - . ID=Thaps7497;Parent=Thaps7497;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 379593 380426 . - 0 ID=Thaps7497;Parent=Thaps7497;rank=1 chr8 . exon 379593 380426 . - . ID=Thaps7497.1;Parent=Thaps7497;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 391639 393481 . + . ID=Thaps23725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q1];external_name=Thaps23725;logic_name=jgi_thaps3 chr8 ensembl transcript 391639 393481 . + . ID=Thaps23725;Parent=Thaps23725;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 391639 391856 . + 0 ID=Thaps23725;Parent=Thaps23725;rank=1 chr8 . exon 391639 391856 . + . ID=Thaps23725.1;Parent=Thaps23725;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 391997 392715 . + 0 ID=Thaps23725;Parent=Thaps23725;rank=2 chr8 . exon 391997 392715 . + . ID=Thaps23725.2;Parent=Thaps23725;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 392793 393481 . + 0 ID=Thaps23725;Parent=Thaps23725;rank=3 chr8 . exon 392793 393481 . + . ID=Thaps23725.3;Parent=Thaps23725;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 398145 398972 . + . ID=Thaps263375;biotype=protein_coding;description=RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q3];external_name=Thaps263375;logic_name=jgi_thaps3 chr8 ensembl transcript 398145 398972 . + . ID=Thaps263375;Parent=Thaps263375;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 398145 398469 . + 0 ID=Thaps263375;Parent=Thaps263375;rank=1 chr8 . exon 398145 398469 . + . ID=Thaps263375.1;Parent=Thaps263375;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 398647 398972 . + 0 ID=Thaps263375;Parent=Thaps263375;rank=2 chr8 . exon 398647 398972 . + . ID=Thaps263375.2;Parent=Thaps263375;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 389544 391300 . - . ID=Thaps7503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q0];external_name=Thaps7503;logic_name=jgi_thaps3 chr8 ensembl transcript 389544 391300 . - . ID=Thaps7503;Parent=Thaps7503;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 389544 389972 . - 0 ID=Thaps7503;Parent=Thaps7503;rank=4 chr8 . exon 389544 389972 . - . ID=Thaps7503.4;Parent=Thaps7503;constitutive=1;rank=4 chr8 . CDS 390076 390191 . - 0 ID=Thaps7503;Parent=Thaps7503;rank=3 chr8 . exon 390076 390191 . - . ID=Thaps7503.3;Parent=Thaps7503;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 390547 390573 . - 0 ID=Thaps7503;Parent=Thaps7503;rank=2 chr8 . exon 390547 390573 . - . ID=Thaps7503.2;Parent=Thaps7503;constitutive=1;rank=2 chr8 . CDS 390754 391300 . - 0 ID=Thaps7503;Parent=Thaps7503;rank=1 chr8 . exon 390754 391300 . - . ID=Thaps7503.1;Parent=Thaps7503;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 396099 397028 . + . ID=Thaps7505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q2];external_name=Thaps7505;logic_name=jgi_thaps3 chr8 ensembl transcript 396099 397028 . + . ID=Thaps7505;Parent=Thaps7505;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 396099 397028 . + 0 ID=Thaps7505;Parent=Thaps7505;rank=1 chr8 . exon 396099 397028 . + . ID=Thaps7505.1;Parent=Thaps7505;constitutive=1;rank=1 chr8 . repeat_region 402062 402069 . ? . description=dust chr8 . repeat_region 405349 405364 . ? . description=dust chr8 ensembl protein_coding_gene 399139 400662 . - . ID=Thaps7506;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q4];external_name=Thaps7506;logic_name=jgi_thaps3 chr8 ensembl transcript 399139 400662 . - . ID=Thaps7506;Parent=Thaps7506;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 399139 399988 . - 0 ID=Thaps7506;Parent=Thaps7506;rank=2 chr8 . exon 399139 399988 . - . ID=Thaps7506.2;Parent=Thaps7506;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 400076 400662 . - 0 ID=Thaps7506;Parent=Thaps7506;rank=1 chr8 . exon 400076 400662 . - . ID=Thaps7506.1;Parent=Thaps7506;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 401119 402212 . + . ID=Thaps7507;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q5];external_name=Thaps7507;logic_name=jgi_thaps3 chr8 ensembl transcript 401119 402212 . + . ID=Thaps7507;Parent=Thaps7507;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 401119 401359 . + 0 ID=Thaps7507;Parent=Thaps7507;rank=1 chr8 . exon 401119 401359 . + . ID=Thaps7507.1;Parent=Thaps7507;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 401674 402212 . + 0 ID=Thaps7507;Parent=Thaps7507;rank=2 chr8 . exon 401674 402212 . + . ID=Thaps7507.2;Parent=Thaps7507;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 403959 404975 . - . ID=Thaps7508;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q6];external_name=Thaps7508;logic_name=jgi_thaps3 chr8 ensembl transcript 403959 404975 . - . ID=Thaps7508;Parent=Thaps7508;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 403959 404480 . - 0 ID=Thaps7508;Parent=Thaps7508;rank=2 chr8 . exon 403959 404480 . - . ID=Thaps7508.2;Parent=Thaps7508;constitutive=1;rank=2 chr8 . CDS 404559 404975 . - 0 ID=Thaps7508;Parent=Thaps7508;rank=1 chr8 . exon 404559 404975 . - . ID=Thaps7508.1;Parent=Thaps7508;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 405233 406531 . - . ID=Thaps7509;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q7];external_name=Thaps7509;logic_name=jgi_thaps3 chr8 ensembl transcript 405233 406531 . - . ID=Thaps7509;Parent=Thaps7509;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 405233 405483 . - 0 ID=Thaps7509;Parent=Thaps7509;rank=3 chr8 . exon 405233 405483 . - . ID=Thaps7509.3;Parent=Thaps7509;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 405601 406190 . - 0 ID=Thaps7509;Parent=Thaps7509;rank=2 chr8 . exon 405601 406190 . - . ID=Thaps7509.2;Parent=Thaps7509;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 406296 406531 . - 0 ID=Thaps7509;Parent=Thaps7509;rank=1 chr8 . exon 406296 406531 . - . ID=Thaps7509.1;Parent=Thaps7509;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 408092 408769 . - . ID=Thaps7510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q8];external_name=Thaps7510;logic_name=jgi_thaps3 chr8 ensembl transcript 408092 408769 . - . ID=Thaps7510;Parent=Thaps7510;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 408092 408769 . - 0 ID=Thaps7510;Parent=Thaps7510;rank=1 chr8 . exon 408092 408769 . - . ID=Thaps7510.1;Parent=Thaps7510;constitutive=1;rank=1 chr8 . repeat_region 414068 414173 . ? . description=trf chr8 . repeat_region 417563 417586 . ? . description=trf chr8 ensembl protein_coding_gene 416061 417289 . - . ID=Thaps15610;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6R2];external_name=Thaps15610;logic_name=jgi_thaps3 chr8 ensembl transcript 416061 417289 . - . ID=Thaps15610;Parent=Thaps15610;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 416061 416350 . - 0 ID=Thaps15610;Parent=Thaps15610;rank=3 chr8 . exon 416061 416350 . - . ID=Thaps15610.3;Parent=Thaps15610;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 416453 416907 . - 0 ID=Thaps15610;Parent=Thaps15610;rank=2 chr8 . exon 416453 416907 . - . ID=Thaps15610.2;Parent=Thaps15610;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 417120 417289 . - 0 ID=Thaps15610;Parent=Thaps15610;rank=1 chr8 . exon 417120 417289 . - . ID=Thaps15610.1;Parent=Thaps15610;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 409144 410005 . + . ID=Thaps23726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Q9];external_name=Thaps23726;logic_name=jgi_thaps3 chr8 ensembl transcript 409144 410005 . + . ID=Thaps23726;Parent=Thaps23726;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 409144 409360 . + 0 ID=Thaps23726;Parent=Thaps23726;rank=1 chr8 . exon 409144 409360 . + . ID=Thaps23726.1;Parent=Thaps23726;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 409381 409601 . + 0 ID=Thaps23726;Parent=Thaps23726;rank=2 chr8 . exon 409381 409601 . + . ID=Thaps23726.2;Parent=Thaps23726;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 409682 410005 . + 0 ID=Thaps23726;Parent=Thaps23726;rank=3 chr8 . exon 409682 410005 . + . ID=Thaps23726.3;Parent=Thaps23726;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 410428 412261 . - . ID=Thaps7512;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6R0];external_name=Thaps7512;logic_name=jgi_thaps3 chr8 ensembl transcript 410428 412261 . - . ID=Thaps7512;Parent=Thaps7512;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 410428 410935 . - 0 ID=Thaps7512;Parent=Thaps7512;rank=4 chr8 . exon 410428 410935 . - . ID=Thaps7512.4;Parent=Thaps7512;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 411157 411917 . - 0 ID=Thaps7512;Parent=Thaps7512;rank=3 chr8 . exon 411157 411917 . - . ID=Thaps7512.3;Parent=Thaps7512;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 412050 412184 . - 0 ID=Thaps7512;Parent=Thaps7512;rank=2 chr8 . exon 412050 412184 . - . ID=Thaps7512.2;Parent=Thaps7512;constitutive=1;rank=2 chr8 . CDS 412217 412261 . - 0 ID=Thaps7512;Parent=Thaps7512;rank=1 chr8 . exon 412217 412261 . - . ID=Thaps7512.1;Parent=Thaps7512;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 412631 413407 . + . ID=Thaps7513;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6R1];external_name=Thaps7513;logic_name=jgi_thaps3 chr8 ensembl transcript 412631 413407 . + . ID=Thaps7513;Parent=Thaps7513;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 412631 413407 . + 0 ID=Thaps7513;Parent=Thaps7513;rank=1 chr8 . exon 412631 413407 . + . ID=Thaps7513.1;Parent=Thaps7513;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 425167 427326 . + . ID=Thaps23728;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6R4];external_name=Thaps23728;logic_name=jgi_thaps3 chr8 ensembl transcript 425167 427326 . + . ID=Thaps23728;Parent=Thaps23728;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 425167 427326 . + 0 ID=Thaps23728;Parent=Thaps23728;rank=1 chr8 . exon 425167 427326 . + . ID=Thaps23728.1;Parent=Thaps23728;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 428709 430448 . - . ID=Thaps23729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6R5];external_name=Thaps23729;logic_name=jgi_thaps3 chr8 ensembl transcript 428709 430448 . - . ID=Thaps23729;Parent=Thaps23729;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 428709 430448 . - 0 ID=Thaps23729;Parent=Thaps23729;rank=1 chr8 . exon 428709 430448 . - . ID=Thaps23729.1;Parent=Thaps23729;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 423585 424641 . - . ID=Thaps7516;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6R3];external_name=Thaps7516;logic_name=jgi_thaps3 chr8 ensembl transcript 423585 424641 . - . ID=Thaps7516;Parent=Thaps7516;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 423585 423956 . - 0 ID=Thaps7516;Parent=Thaps7516;rank=2 chr8 . exon 423585 423956 . - . ID=Thaps7516.2;Parent=Thaps7516;constitutive=1;rank=2 chr8 . CDS 424048 424641 . - 0 ID=Thaps7516;Parent=Thaps7516;rank=1 chr8 . exon 424048 424641 . - . ID=Thaps7516.1;Parent=Thaps7516;constitutive=1;rank=1 chr8 . repeat_region 431944 431975 . ? . description=dust chr8 . repeat_region 433849 433857 . ? . description=dust chr8 . repeat_region 434314 434327 . ? . description=dust chr8 . repeat_region 435617 435655 . ? . description=dust chr8 ensembl protein_coding_gene 432911 434737 . - . ID=Thaps23731;biotype=protein_coding;description=Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8C6R7];external_name=Thaps23731;logic_name=jgi_thaps3 chr8 ensembl transcript 432911 434737 . - . ID=Thaps23731;Parent=Thaps23731;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 432911 434737 . - 0 ID=Thaps23731;Parent=Thaps23731;rank=1 chr8 . exon 432911 434737 . - . ID=Thaps23731.1;Parent=Thaps23731;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 435310 436238 . + . ID=Thaps29117;biotype=protein_coding;description=Putative v-type h-ATPase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C6R8];external_name=Thaps29117;logic_name=jgi_thaps3 chr8 ensembl transcript 435310 436238 . + . ID=Thaps29117;Parent=Thaps29117;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 435310 435366 . + 0 ID=Thaps29117;Parent=Thaps29117;rank=1 chr8 . exon 435310 435366 . + . ID=Thaps29117.1;Parent=Thaps29117;constitutive=1;rank=1 chr8 . CDS 435657 436238 . + 0 ID=Thaps29117;Parent=Thaps29117;rank=2 chr8 . exon 435657 436238 . + . ID=Thaps29117.2;Parent=Thaps29117;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 437536 439239 . - . ID=Thaps41521;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6S0];external_name=Thaps41521;logic_name=jgi_thaps3 chr8 ensembl transcript 437536 439239 . - . ID=Thaps41521;Parent=Thaps41521;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 437536 438101 . - 0 ID=Thaps41521;Parent=Thaps41521;rank=2 chr8 . exon 437536 438101 . - . ID=Thaps41521.2;Parent=Thaps41521;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 438177 439239 . - 0 ID=Thaps41521;Parent=Thaps41521;rank=1 chr8 . exon 438177 439239 . - . ID=Thaps41521.1;Parent=Thaps41521;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 430947 431702 . + . ID=Thaps7519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6R6];external_name=Thaps7519;logic_name=jgi_thaps3 chr8 ensembl transcript 430947 431702 . + . ID=Thaps7519;Parent=Thaps7519;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 430947 431260 . + 0 ID=Thaps7519;Parent=Thaps7519;rank=1 chr8 . exon 430947 431260 . + . ID=Thaps7519.1;Parent=Thaps7519;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 431357 431702 . + 0 ID=Thaps7519;Parent=Thaps7519;rank=2 chr8 . exon 431357 431702 . + . ID=Thaps7519.2;Parent=Thaps7519;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 436418 437167 . - . ID=Thaps7523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6R9];external_name=Thaps7523;logic_name=jgi_thaps3 chr8 ensembl transcript 436418 437167 . - . ID=Thaps7523;Parent=Thaps7523;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 436418 437167 . - 0 ID=Thaps7523;Parent=Thaps7523;rank=1 chr8 . exon 436418 437167 . - . ID=Thaps7523.1;Parent=Thaps7523;constitutive=1;rank=1 chr8 . repeat_region 447414 447465 . ? . description=trf chr8 ensembl protein_coding_gene 440010 441986 . + . ID=Thaps23734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6S1];external_name=Thaps23734;logic_name=jgi_thaps3 chr8 ensembl transcript 440010 441986 . + . ID=Thaps23734;Parent=Thaps23734;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 440010 440872 . + 0 ID=Thaps23734;Parent=Thaps23734;rank=1 chr8 . exon 440010 440872 . + . ID=Thaps23734.1;Parent=Thaps23734;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 440990 441986 . + 0 ID=Thaps23734;Parent=Thaps23734;rank=2 chr8 . exon 440990 441986 . + . ID=Thaps23734.2;Parent=Thaps23734;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 442335 446182 . - . ID=Thaps263381;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6S2];external_name=Thaps263381;logic_name=jgi_thaps3 chr8 ensembl transcript 442335 446182 . - . ID=Thaps263381;Parent=Thaps263381;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 442335 442589 . - 0 ID=Thaps263381;Parent=Thaps263381;rank=8 chr8 . exon 442335 442589 . - . ID=Thaps263381.8;Parent=Thaps263381;constitutive=1;rank=8 chr8 . CDS 442754 442964 . - 0 ID=Thaps263381;Parent=Thaps263381;rank=7 chr8 . exon 442754 442964 . - . ID=Thaps263381.7;Parent=Thaps263381;constitutive=1;ensembl_end_phase=1;rank=7 chr8 . CDS 443145 443361 . - 0 ID=Thaps263381;Parent=Thaps263381;rank=6 chr8 . exon 443145 443361 . - . ID=Thaps263381.6;Parent=Thaps263381;constitutive=1;ensembl_end_phase=1;rank=6 chr8 . CDS 443512 444083 . - 0 ID=Thaps263381;Parent=Thaps263381;rank=5 chr8 . exon 443512 444083 . - . ID=Thaps263381.5;Parent=Thaps263381;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . CDS 444170 445144 . - 0 ID=Thaps263381;Parent=Thaps263381;rank=4 chr8 . exon 444170 445144 . - . ID=Thaps263381.4;Parent=Thaps263381;constitutive=1;rank=4 chr8 . CDS 445295 445938 . - 0 ID=Thaps263381;Parent=Thaps263381;rank=3 chr8 . exon 445295 445938 . - . ID=Thaps263381.3;Parent=Thaps263381;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 446044 446073 . - 0 ID=Thaps263381;Parent=Thaps263381;rank=2 chr8 . exon 446044 446073 . - . ID=Thaps263381.2;Parent=Thaps263381;constitutive=1;rank=2 chr8 . CDS 446125 446182 . - 0 ID=Thaps263381;Parent=Thaps263381;rank=1 chr8 . exon 446125 446182 . - . ID=Thaps263381.1;Parent=Thaps263381;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 446609 450143 . + . ID=Thaps7527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6S3];external_name=Thaps7527;logic_name=jgi_thaps3 chr8 ensembl transcript 446609 450143 . + . ID=Thaps7527;Parent=Thaps7527;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 446609 447532 . + 0 ID=Thaps7527;Parent=Thaps7527;rank=1 chr8 . exon 446609 447532 . + . ID=Thaps7527.1;Parent=Thaps7527;constitutive=1;rank=1 chr8 . CDS 447589 449915 . + 0 ID=Thaps7527;Parent=Thaps7527;rank=2 chr8 . exon 447589 449915 . + . ID=Thaps7527.2;Parent=Thaps7527;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 450002 450143 . + 0 ID=Thaps7527;Parent=Thaps7527;rank=3 chr8 . repeat_region 452964 452971 . ? . description=dust chr8 ensembl protein_coding_gene 450722 452755 . + . ID=Thaps23735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6S4];external_name=Thaps23735;logic_name=jgi_thaps3 chr8 ensembl transcript 450722 452755 . + . ID=Thaps23735;Parent=Thaps23735;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 450722 451398 . + 0 ID=Thaps23735;Parent=Thaps23735;rank=1 chr8 . exon 450722 451398 . + . ID=Thaps23735.1;Parent=Thaps23735;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 451489 451577 . + 0 ID=Thaps23735;Parent=Thaps23735;rank=2 chr8 . exon 451489 451577 . + . ID=Thaps23735.2;Parent=Thaps23735;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 451669 452123 . + 0 ID=Thaps23735;Parent=Thaps23735;rank=3 chr8 . exon 451669 452123 . + . ID=Thaps23735.3;Parent=Thaps23735;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 452219 452755 . + 0 ID=Thaps23735;Parent=Thaps23735;rank=4 chr8 . exon 452219 452755 . + . ID=Thaps23735.4;Parent=Thaps23735;constitutive=1;rank=4 chr8 ensembl protein_coding_gene 452960 454270 . - . ID=Thaps269347;biotype=protein_coding;description=Flap endonuclease 1 [Source:UniProtKB/Swiss-Prot%3BAcc:B8C6S5];external_name=FEN1;logic_name=jgi_thaps3 chr8 ensembl transcript 452960 454270 . - . ID=Thaps269347;Parent=Thaps269347;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 452960 453294 . - 0 ID=Thaps269347;Parent=Thaps269347;rank=2 chr8 . exon 452960 453294 . - . ID=Thaps269347.2;Parent=Thaps269347;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 453433 454270 . - 0 ID=Thaps269347;Parent=Thaps269347;rank=1 chr8 . exon 453433 454270 . - . ID=Thaps269347.1;Parent=Thaps269347;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . exon 450002 450143 . + . ID=Thaps7527.3;Parent=Thaps7527;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 455704 460257 . + . ID=Thaps7530;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6S6];external_name=Thaps7530;logic_name=jgi_thaps3 chr8 ensembl transcript 455704 460257 . + . ID=Thaps7530;Parent=Thaps7530;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 455704 458839 . + 0 ID=Thaps7530;Parent=Thaps7530;rank=1 chr8 . exon 455704 458839 . + . ID=Thaps7530.1;Parent=Thaps7530;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 458891 459232 . + 0 ID=Thaps7530;Parent=Thaps7530;rank=2 chr8 . exon 458891 459232 . + . ID=Thaps7530.2;Parent=Thaps7530;constitutive=1;rank=2 chr8 . CDS 459302 459538 . + 0 ID=Thaps7530;Parent=Thaps7530;rank=3 chr8 . CDS 459619 459856 . + 0 ID=Thaps7530;Parent=Thaps7530;rank=4 chr8 . CDS 459957 460257 . + 0 ID=Thaps7530;Parent=Thaps7530;rank=5 chr8 . repeat_region 462921 462973 . ? . description=trf chr8 . repeat_region 464994 465060 . + . description=TE2c_TP chr8 ensembl protein_coding_gene 461773 462996 . - . ID=Thaps23737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6S7];external_name=Thaps23737;logic_name=jgi_thaps3 chr8 ensembl transcript 461773 462996 . - . ID=Thaps23737;Parent=Thaps23737;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 461773 462996 . - 0 ID=Thaps23737;Parent=Thaps23737;rank=1 chr8 . exon 461773 462996 . - . ID=Thaps23737.1;Parent=Thaps23737;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 463719 469770 . + . ID=Thaps23738;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6S8];external_name=Thaps23738;logic_name=jgi_thaps3 chr8 ensembl transcript 463719 469770 . + . ID=Thaps23738;Parent=Thaps23738;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 463719 464747 . + 0 ID=Thaps23738;Parent=Thaps23738;rank=1 chr8 . exon 463719 464747 . + . ID=Thaps23738.1;Parent=Thaps23738;constitutive=1;rank=1 chr8 . CDS 464800 464874 . + 0 ID=Thaps23738;Parent=Thaps23738;rank=2 chr8 . exon 464800 464874 . + . ID=Thaps23738.2;Parent=Thaps23738;constitutive=1;rank=2 chr8 . CDS 464909 464974 . + 0 ID=Thaps23738;Parent=Thaps23738;rank=3 chr8 . exon 464909 464974 . + . ID=Thaps23738.3;Parent=Thaps23738;constitutive=1;rank=3 chr8 . CDS 465126 468383 . + 0 ID=Thaps23738;Parent=Thaps23738;rank=4 chr8 . exon 465126 468383 . + . ID=Thaps23738.4;Parent=Thaps23738;constitutive=1;rank=4 chr8 . CDS 468463 468745 . + 0 ID=Thaps23738;Parent=Thaps23738;rank=5 chr8 . exon 468463 468745 . + . ID=Thaps23738.5;Parent=Thaps23738;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 468849 469052 . + 0 ID=Thaps23738;Parent=Thaps23738;rank=6 chr8 . exon 468849 469052 . + . ID=Thaps23738.6;Parent=Thaps23738;constitutive=1;rank=6 chr8 . CDS 469135 469372 . + 0 ID=Thaps23738;Parent=Thaps23738;rank=7 chr8 . CDS 469473 469770 . + 0 ID=Thaps23738;Parent=Thaps23738;rank=8 chr8 . exon 459302 459538 . + . ID=Thaps7530.3;Parent=Thaps7530;constitutive=1;rank=3 chr8 . exon 459619 459856 . + . ID=Thaps7530.4;Parent=Thaps7530;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . exon 459957 460257 . + . ID=Thaps7530.5;Parent=Thaps7530;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . exon 469135 469372 . + . ID=Thaps23738.7;Parent=Thaps23738;constitutive=1;ensembl_end_phase=1;rank=7 chr8 . exon 469473 469770 . + . ID=Thaps23738.8;Parent=Thaps23738;constitutive=1;ensembl_end_phase=1;rank=8 chr8 ensembl protein_coding_gene 472915 474774 . - . ID=Thaps23740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6T0];external_name=Thaps23740;logic_name=jgi_thaps3 chr8 ensembl transcript 472915 474774 . - . ID=Thaps23740;Parent=Thaps23740;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 472915 474774 . - 0 ID=Thaps23740;Parent=Thaps23740;rank=1 chr8 . exon 472915 474774 . - . ID=Thaps23740.1;Parent=Thaps23740;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 471103 472557 . - . ID=Thaps35771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6S9];external_name=Thaps35771;logic_name=jgi_thaps3 chr8 ensembl transcript 471103 472557 . - . ID=Thaps35771;Parent=Thaps35771;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 471103 471779 . - 0 ID=Thaps35771;Parent=Thaps35771;rank=3 chr8 . exon 471103 471779 . - . ID=Thaps35771.3;Parent=Thaps35771;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 471825 472319 . - 0 ID=Thaps35771;Parent=Thaps35771;rank=2 chr8 . exon 471825 472319 . - . ID=Thaps35771.2;Parent=Thaps35771;constitutive=1;rank=2 chr8 . CDS 472449 472557 . - 0 ID=Thaps35771;Parent=Thaps35771;rank=1 chr8 . exon 472449 472557 . - . ID=Thaps35771.1;Parent=Thaps35771;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 475282 475986 . - . ID=Thaps41530;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6T1];external_name=Thaps41530;logic_name=jgi_thaps3 chr8 ensembl transcript 475282 475986 . - . ID=Thaps41530;Parent=Thaps41530;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 475282 475368 . - 0 ID=Thaps41530;Parent=Thaps41530;rank=2 chr8 . exon 475282 475368 . - . ID=Thaps41530.2;Parent=Thaps41530;constitutive=1;rank=2 chr8 . CDS 475747 475986 . - 0 ID=Thaps41530;Parent=Thaps41530;rank=1 chr8 . exon 475747 475986 . - . ID=Thaps41530.1;Parent=Thaps41530;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 476325 476987 . - . ID=Thaps7536;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6T2];external_name=Thaps7536;logic_name=jgi_thaps3 chr8 ensembl transcript 476325 476987 . - . ID=Thaps7536;Parent=Thaps7536;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 476325 476987 . - 0 ID=Thaps7536;Parent=Thaps7536;rank=1 chr8 . exon 476325 476987 . - . ID=Thaps7536.1;Parent=Thaps7536;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 477968 480258 . + . ID=Thaps7537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6T3];external_name=Thaps7537;logic_name=jgi_thaps3 chr8 ensembl transcript 477968 480258 . + . ID=Thaps7537;Parent=Thaps7537;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 477968 478798 . + 0 ID=Thaps7537;Parent=Thaps7537;rank=1 chr8 . exon 477968 478798 . + . ID=Thaps7537.1;Parent=Thaps7537;constitutive=1;rank=1 chr8 . CDS 478879 480258 . + 0 ID=Thaps7537;Parent=Thaps7537;rank=2 chr8 . exon 478879 480258 . + . ID=Thaps7537.2;Parent=Thaps7537;constitutive=1;rank=2 chr8 . repeat_region 482575 482696 . ? . description=trf chr8 ensembl protein_coding_gene 480387 480995 . - . ID=Thaps36073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6T4];external_name=Thaps36073;logic_name=jgi_thaps3 chr8 ensembl transcript 480387 480995 . - . ID=Thaps36073;Parent=Thaps36073;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 480387 480995 . - 0 ID=Thaps36073;Parent=Thaps36073;rank=1 chr8 . exon 480387 480995 . - . ID=Thaps36073.1;Parent=Thaps36073;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 484954 489285 . - . ID=Thaps7539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6T5];external_name=Thaps7539;logic_name=jgi_thaps3 chr8 ensembl transcript 484954 489285 . - . ID=Thaps7539;Parent=Thaps7539;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 484954 485405 . - 0 ID=Thaps7539;Parent=Thaps7539;rank=3 chr8 . exon 484954 485405 . - . ID=Thaps7539.3;Parent=Thaps7539;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 485486 485539 . - 0 ID=Thaps7539;Parent=Thaps7539;rank=2 chr8 . exon 485486 485539 . - . ID=Thaps7539.2;Parent=Thaps7539;constitutive=1;rank=2 chr8 . CDS 485631 489285 . - 0 ID=Thaps7539;Parent=Thaps7539;rank=1 chr8 . exon 485631 489285 . - . ID=Thaps7539.1;Parent=Thaps7539;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . repeat_region 496715 496730 . ? . description=dust chr8 . repeat_region 496842 496851 . ? . description=dust chr8 . repeat_region 497991 497999 . ? . description=dust chr8 ensembl protein_coding_gene 495519 496516 . + . ID=Thaps269348;biotype=protein_coding;description=Inorganic pyrophosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8C6T9];external_name=Thaps269348;logic_name=jgi_thaps3 chr8 ensembl transcript 495519 496516 . + . ID=Thaps269348;Parent=Thaps269348;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 495519 495966 . + 0 ID=Thaps269348;Parent=Thaps269348;rank=1 chr8 . exon 495519 495966 . + . ID=Thaps269348.1;Parent=Thaps269348;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 496149 496516 . + 0 ID=Thaps269348;Parent=Thaps269348;rank=2 chr8 . exon 496149 496516 . + . ID=Thaps269348.2;Parent=Thaps269348;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 498169 498444 . + . ID=Thaps35855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U0];external_name=Thaps35855;logic_name=jgi_thaps3 chr8 ensembl transcript 498169 498444 . + . ID=Thaps35855;Parent=Thaps35855;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 498169 498444 . + 0 ID=Thaps35855;Parent=Thaps35855;rank=1 chr8 . exon 498169 498444 . + . ID=Thaps35855.1;Parent=Thaps35855;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 489512 490878 . + . ID=Thaps7540;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6T6];external_name=Thaps7540;logic_name=jgi_thaps3 chr8 ensembl transcript 489512 490878 . + . ID=Thaps7540;Parent=Thaps7540;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 489512 489749 . + 0 ID=Thaps7540;Parent=Thaps7540;rank=1 chr8 . exon 489512 489749 . + . ID=Thaps7540.1;Parent=Thaps7540;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 489800 490367 . + 0 ID=Thaps7540;Parent=Thaps7540;rank=2 chr8 . exon 489800 490367 . + . ID=Thaps7540.2;Parent=Thaps7540;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 490482 490878 . + 0 ID=Thaps7540;Parent=Thaps7540;rank=3 chr8 . exon 490482 490878 . + . ID=Thaps7540.3;Parent=Thaps7540;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 492767 493969 . + . ID=Thaps7541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6T7];external_name=Thaps7541;logic_name=jgi_thaps3 chr8 ensembl transcript 492767 493969 . + . ID=Thaps7541;Parent=Thaps7541;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 492767 493180 . + 0 ID=Thaps7541;Parent=Thaps7541;rank=1 chr8 . exon 492767 493180 . + . ID=Thaps7541.1;Parent=Thaps7541;constitutive=1;rank=1 chr8 . CDS 493256 493969 . + 0 ID=Thaps7541;Parent=Thaps7541;rank=2 chr8 . exon 493256 493969 . + . ID=Thaps7541.2;Parent=Thaps7541;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 494076 495193 . - . ID=Thaps7542;biotype=protein_coding;description=Ribonuclease [Source:UniProtKB/TrEMBL%3BAcc:B8C6T8];external_name=Thaps7542;logic_name=jgi_thaps3 chr8 ensembl transcript 494076 495193 . - . ID=Thaps7542;Parent=Thaps7542;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 494076 494491 . - 0 ID=Thaps7542;Parent=Thaps7542;rank=2 chr8 . exon 494076 494491 . - . ID=Thaps7542.2;Parent=Thaps7542;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 494584 495193 . - 0 ID=Thaps7542;Parent=Thaps7542;rank=1 chr8 . exon 494584 495193 . - . ID=Thaps7542.1;Parent=Thaps7542;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 501506 505004 . - . ID=Thaps7545;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U1];external_name=Thaps7545;logic_name=jgi_thaps3 chr8 ensembl transcript 501506 505004 . - . ID=Thaps7545;Parent=Thaps7545;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 501506 502504 . - 0 ID=Thaps7545;Parent=Thaps7545;rank=3 chr8 . exon 501506 502504 . - . ID=Thaps7545.3;Parent=Thaps7545;constitutive=1;rank=3 chr8 . CDS 502584 503548 . - 0 ID=Thaps7545;Parent=Thaps7545;rank=2 chr8 . exon 502584 503548 . - . ID=Thaps7545.2;Parent=Thaps7545;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 503633 505004 . - 0 ID=Thaps7545;Parent=Thaps7545;rank=1 chr8 . exon 503633 505004 . - . ID=Thaps7545.1;Parent=Thaps7545;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 505533 508166 . + . ID=Thaps7546;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U2];external_name=Thaps7546;logic_name=jgi_thaps3 chr8 ensembl transcript 505533 508166 . + . ID=Thaps7546;Parent=Thaps7546;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 505533 505982 . + 0 ID=Thaps7546;Parent=Thaps7546;rank=1 chr8 . exon 505533 505982 . + . ID=Thaps7546.1;Parent=Thaps7546;constitutive=1;rank=1 chr8 . CDS 506057 507557 . + 0 ID=Thaps7546;Parent=Thaps7546;rank=2 chr8 . exon 506057 507557 . + . ID=Thaps7546.2;Parent=Thaps7546;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 507646 508166 . + 0 ID=Thaps7546;Parent=Thaps7546;rank=3 chr8 . exon 507646 508166 . + . ID=Thaps7546.3;Parent=Thaps7546;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 508244 509553 . - . ID=Thaps7547;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U3];external_name=Thaps7547;logic_name=jgi_thaps3 chr8 ensembl transcript 508244 509553 . - . ID=Thaps7547;Parent=Thaps7547;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 508244 509108 . - 0 ID=Thaps7547;Parent=Thaps7547;rank=2 chr8 . exon 508244 509108 . - . ID=Thaps7547.2;Parent=Thaps7547;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 509195 509553 . - 0 ID=Thaps7547;Parent=Thaps7547;rank=1 chr8 . repeat_region 516704 516742 . ? . description=trf chr8 ensembl protein_coding_gene 513337 514209 . - . ID=Thaps14492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U5];external_name=Thaps14492;logic_name=jgi_thaps3 chr8 ensembl transcript 513337 514209 . - . ID=Thaps14492;Parent=Thaps14492;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 513337 513738 . - 0 ID=Thaps14492;Parent=Thaps14492;rank=2 chr8 . exon 513337 513738 . - . ID=Thaps14492.2;Parent=Thaps14492;constitutive=1;rank=2 chr8 . CDS 513826 514209 . - 0 ID=Thaps14492;Parent=Thaps14492;rank=1 chr8 . exon 513826 514209 . - . ID=Thaps14492.1;Parent=Thaps14492;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 511747 512958 . + . ID=Thaps29139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U4];external_name=Thaps29139;logic_name=jgi_thaps3 chr8 ensembl transcript 511747 512958 . + . ID=Thaps29139;Parent=Thaps29139;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 511747 512958 . + 0 ID=Thaps29139;Parent=Thaps29139;rank=1 chr8 . exon 511747 512958 . + . ID=Thaps29139.1;Parent=Thaps29139;constitutive=1;rank=1 chr8 . exon 509195 509553 . - . ID=Thaps7547.1;Parent=Thaps7547;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 517132 517992 . + . ID=Thaps7550;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U6];external_name=Thaps7550;logic_name=jgi_thaps3 chr8 ensembl transcript 517132 517992 . + . ID=Thaps7550;Parent=Thaps7550;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 517132 517992 . + 0 ID=Thaps7550;Parent=Thaps7550;rank=1 chr8 . exon 517132 517992 . + . ID=Thaps7550.1;Parent=Thaps7550;constitutive=1;rank=1 chr8 . repeat_region 524801 524991 . + . description=MuDR1_TP chr8 . repeat_region 524978 525112 . + . description=MuDR1_TP chr8 . repeat_region 525466 525495 . ? . description=dust chr8 ensembl protein_coding_gene 521141 524158 . - . ID=Thaps23747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U8];external_name=Thaps23747;logic_name=jgi_thaps3 chr8 ensembl transcript 521141 524158 . - . ID=Thaps23747;Parent=Thaps23747;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 521141 521269 . - 0 ID=Thaps23747;Parent=Thaps23747;rank=2 chr8 . exon 521141 521269 . - . ID=Thaps23747.2;Parent=Thaps23747;constitutive=1;rank=2 chr8 . CDS 521354 524158 . - 0 ID=Thaps23747;Parent=Thaps23747;rank=1 chr8 . exon 521354 524158 . - . ID=Thaps23747.1;Parent=Thaps23747;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 519155 520621 . + . ID=Thaps7551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U7];external_name=Thaps7551;logic_name=jgi_thaps3 chr8 ensembl transcript 519155 520621 . + . ID=Thaps7551;Parent=Thaps7551;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 519155 519211 . + 0 ID=Thaps7551;Parent=Thaps7551;rank=1 chr8 . exon 519155 519211 . + . ID=Thaps7551.1;Parent=Thaps7551;constitutive=1;rank=1 chr8 . CDS 519527 520621 . + 0 ID=Thaps7551;Parent=Thaps7551;rank=2 chr8 . exon 519527 520621 . + . ID=Thaps7551.2;Parent=Thaps7551;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 525571 529150 . + . ID=Thaps7553;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6U9];external_name=Thaps7553;logic_name=jgi_thaps3 chr8 ensembl transcript 525571 529150 . + . ID=Thaps7553;Parent=Thaps7553;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 525571 525607 . + 0 ID=Thaps7553;Parent=Thaps7553;rank=1 chr8 . exon 525571 525607 . + . ID=Thaps7553.1;Parent=Thaps7553;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 525875 527362 . + 0 ID=Thaps7553;Parent=Thaps7553;rank=2 chr8 . exon 525875 527362 . + . ID=Thaps7553.2;Parent=Thaps7553;constitutive=1;rank=2 chr8 . CDS 527475 527710 . + 0 ID=Thaps7553;Parent=Thaps7553;rank=3 chr8 . exon 527475 527710 . + . ID=Thaps7553.3;Parent=Thaps7553;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 527807 528325 . + 0 ID=Thaps7553;Parent=Thaps7553;rank=4 chr8 . exon 527807 528325 . + . ID=Thaps7553.4;Parent=Thaps7553;constitutive=1;rank=4 chr8 . CDS 528421 528501 . + 0 ID=Thaps7553;Parent=Thaps7553;rank=5 chr8 . exon 528421 528501 . + . ID=Thaps7553.5;Parent=Thaps7553;constitutive=1;rank=5 chr8 . CDS 528608 529150 . + 0 ID=Thaps7553;Parent=Thaps7553;rank=6 chr8 . exon 528608 529150 . + . ID=Thaps7553.6;Parent=Thaps7553;constitutive=1;rank=6 chr8 . repeat_region 532405 532460 . ? . description=trf chr8 . repeat_region 532405 532461 . ? . description=trf chr8 ensembl protein_coding_gene 532321 535785 . + . ID=Thaps23748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6V1];external_name=Thaps23748;logic_name=jgi_thaps3 chr8 ensembl transcript 532321 535785 . + . ID=Thaps23748;Parent=Thaps23748;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 532321 535785 . + 0 ID=Thaps23748;Parent=Thaps23748;rank=1 chr8 . exon 532321 535785 . + . ID=Thaps23748.1;Parent=Thaps23748;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 536285 537541 . + . ID=Thaps263385;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C6V2];external_name=Thaps263385;logic_name=jgi_thaps3 chr8 ensembl transcript 536285 537541 . + . ID=Thaps263385;Parent=Thaps263385;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 536285 536656 . + 0 ID=Thaps263385;Parent=Thaps263385;rank=1 chr8 . exon 536285 536656 . + . ID=Thaps263385.1;Parent=Thaps263385;constitutive=1;rank=1 chr8 . CDS 536757 537108 . + 0 ID=Thaps263385;Parent=Thaps263385;rank=2 chr8 . exon 536757 537108 . + . ID=Thaps263385.2;Parent=Thaps263385;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 537183 537214 . + 0 ID=Thaps263385;Parent=Thaps263385;rank=3 chr8 . exon 537183 537214 . + . ID=Thaps263385.3;Parent=Thaps263385;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 537245 537541 . + 0 ID=Thaps263385;Parent=Thaps263385;rank=4 chr8 . exon 537245 537541 . + . ID=Thaps263385.4;Parent=Thaps263385;constitutive=1;rank=4 chr8 ensembl protein_coding_gene 530160 531975 . + . ID=Thaps7554;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6V0];external_name=Thaps7554;logic_name=jgi_thaps3 chr8 ensembl transcript 530160 531975 . + . ID=Thaps7554;Parent=Thaps7554;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 530160 531210 . + 0 ID=Thaps7554;Parent=Thaps7554;rank=1 chr8 . exon 530160 531210 . + . ID=Thaps7554.1;Parent=Thaps7554;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 531497 531975 . + 0 ID=Thaps7554;Parent=Thaps7554;rank=2 chr8 . exon 531497 531975 . + . ID=Thaps7554.2;Parent=Thaps7554;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . repeat_region 539201 539208 . ? . description=dust chr8 . repeat_region 547072 547116 . - . description=Gypsy3LTR_TP chr8 ensembl protein_coding_gene 545221 546971 . - . ID=Thaps23750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6V6];external_name=Thaps23750;logic_name=jgi_thaps3 chr8 ensembl transcript 545221 546971 . - . ID=Thaps23750;Parent=Thaps23750;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 545221 545406 . - 0 ID=Thaps23750;Parent=Thaps23750;rank=3 chr8 . exon 545221 545406 . - . ID=Thaps23750.3;Parent=Thaps23750;constitutive=1;rank=3 chr8 . CDS 545482 545556 . - 0 ID=Thaps23750;Parent=Thaps23750;rank=2 chr8 . exon 545482 545556 . - . ID=Thaps23750.2;Parent=Thaps23750;constitutive=1;rank=2 chr8 . CDS 545655 546971 . - 0 ID=Thaps23750;Parent=Thaps23750;rank=1 chr8 . exon 545655 546971 . - . ID=Thaps23750.1;Parent=Thaps23750;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 548008 550791 . - . ID=Thaps23751;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6V7];external_name=Thaps23751;logic_name=jgi_thaps3 chr8 ensembl transcript 548008 550791 . - . ID=Thaps23751;Parent=Thaps23751;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 548008 548374 . - 0 ID=Thaps23751;Parent=Thaps23751;rank=3 chr8 . exon 548008 548374 . - . ID=Thaps23751.3;Parent=Thaps23751;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 548456 549268 . - 0 ID=Thaps23751;Parent=Thaps23751;rank=2 chr8 . exon 548456 549268 . - . ID=Thaps23751.2;Parent=Thaps23751;constitutive=1;rank=2 chr8 . CDS 549449 550791 . - 0 ID=Thaps23751;Parent=Thaps23751;rank=1 chr8 ensembl protein_coding_gene 543231 544742 . + . ID=Thaps263386;biotype=protein_coding;description=Apyrase [Source:UniProtKB/TrEMBL%3BAcc:B8C6V5];external_name=Thaps263386;logic_name=jgi_thaps3 chr8 ensembl transcript 543231 544742 . + . ID=Thaps263386;Parent=Thaps263386;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 543231 543455 . + 0 ID=Thaps263386;Parent=Thaps263386;rank=1 chr8 . exon 543231 543455 . + . ID=Thaps263386.1;Parent=Thaps263386;constitutive=1;rank=1 chr8 . CDS 543628 544063 . + 0 ID=Thaps263386;Parent=Thaps263386;rank=2 chr8 . exon 543628 544063 . + . ID=Thaps263386.2;Parent=Thaps263386;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 544268 544742 . + 0 ID=Thaps263386;Parent=Thaps263386;rank=3 chr8 . exon 544268 544742 . + . ID=Thaps263386.3;Parent=Thaps263386;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 539243 540477 . + . ID=Thaps35896;biotype=protein_coding;description=Methylthioribose-1-phosphate isomerase [Source:UniProtKB/Swiss-Prot%3BAcc:B8C6V3];external_name=Thaps35896;logic_name=jgi_thaps3 chr8 ensembl transcript 539243 540477 . + . ID=Thaps35896;Parent=Thaps35896;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 539243 539898 . + 0 ID=Thaps35896;Parent=Thaps35896;rank=1 chr8 . exon 539243 539898 . + . ID=Thaps35896.1;Parent=Thaps35896;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 540012 540477 . + 0 ID=Thaps35896;Parent=Thaps35896;rank=2 chr8 . exon 540012 540477 . + . ID=Thaps35896.2;Parent=Thaps35896;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 540603 542231 . - . ID=Thaps7558;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6V4];external_name=Thaps7558;logic_name=jgi_thaps3 chr8 ensembl transcript 540603 542231 . - . ID=Thaps7558;Parent=Thaps7558;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 540603 542231 . - 0 ID=Thaps7558;Parent=Thaps7558;rank=1 chr8 . exon 540603 542231 . - . ID=Thaps7558.1;Parent=Thaps7558;constitutive=1;rank=1 chr8 . repeat_region 553762 553800 . ? . description=trf chr8 . exon 549449 550791 . - . ID=Thaps23751.1;Parent=Thaps23751;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 555524 557816 . + . ID=Thaps23753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6W1];external_name=Thaps23753;logic_name=jgi_thaps3 chr8 ensembl transcript 555524 557816 . + . ID=Thaps23753;Parent=Thaps23753;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 555524 556040 . + 0 ID=Thaps23753;Parent=Thaps23753;rank=1 chr8 . exon 555524 556040 . + . ID=Thaps23753.1;Parent=Thaps23753;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 556143 556511 . + 0 ID=Thaps23753;Parent=Thaps23753;rank=2 chr8 . exon 556143 556511 . + . ID=Thaps23753.2;Parent=Thaps23753;constitutive=1;rank=2 chr8 . CDS 556585 556665 . + 0 ID=Thaps23753;Parent=Thaps23753;rank=3 chr8 . exon 556585 556665 . + . ID=Thaps23753.3;Parent=Thaps23753;constitutive=1;rank=3 chr8 . CDS 556738 557816 . + 0 ID=Thaps23753;Parent=Thaps23753;rank=4 chr8 . exon 556738 557816 . + . ID=Thaps23753.4;Parent=Thaps23753;constitutive=1;ensembl_end_phase=2;rank=4 chr8 ensembl protein_coding_gene 558272 561290 . - . ID=Thaps23754;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6W2];external_name=Thaps23754;logic_name=jgi_thaps3 chr8 ensembl transcript 558272 561290 . - . ID=Thaps23754;Parent=Thaps23754;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 558272 558356 . - 0 ID=Thaps23754;Parent=Thaps23754;rank=3 chr8 . exon 558272 558356 . - . ID=Thaps23754.3;Parent=Thaps23754;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 558440 558985 . - 0 ID=Thaps23754;Parent=Thaps23754;rank=2 chr8 . exon 558440 558985 . - . ID=Thaps23754.2;Parent=Thaps23754;constitutive=1;rank=2 chr8 . CDS 559078 561290 . - 0 ID=Thaps23754;Parent=Thaps23754;rank=1 chr8 ensembl protein_coding_gene 551090 552495 . + . ID=Thaps29144;biotype=protein_coding;description=Homoserine dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C6V8];external_name=Thaps29144;logic_name=jgi_thaps3 chr8 ensembl transcript 551090 552495 . + . ID=Thaps29144;Parent=Thaps29144;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 551090 551561 . + 0 ID=Thaps29144;Parent=Thaps29144;rank=1 chr8 . exon 551090 551561 . + . ID=Thaps29144.1;Parent=Thaps29144;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 551666 552495 . + 0 ID=Thaps29144;Parent=Thaps29144;rank=2 chr8 . exon 551666 552495 . + . ID=Thaps29144.2;Parent=Thaps29144;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 552753 553359 . - . ID=Thaps36078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6V9];external_name=Thaps36078;logic_name=jgi_thaps3 chr8 ensembl transcript 552753 553359 . - . ID=Thaps36078;Parent=Thaps36078;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 552753 552905 . - 0 ID=Thaps36078;Parent=Thaps36078;rank=3 chr8 . exon 552753 552905 . - . ID=Thaps36078.3;Parent=Thaps36078;constitutive=1;rank=3 chr8 . CDS 552988 553062 . - 0 ID=Thaps36078;Parent=Thaps36078;rank=2 chr8 . exon 552988 553062 . - . ID=Thaps36078.2;Parent=Thaps36078;constitutive=1;rank=2 chr8 . CDS 553150 553359 . - 0 ID=Thaps36078;Parent=Thaps36078;rank=1 chr8 . exon 553150 553359 . - . ID=Thaps36078.1;Parent=Thaps36078;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 554224 555336 . - . ID=Thaps7564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6W0];external_name=Thaps7564;logic_name=jgi_thaps3 chr8 ensembl transcript 554224 555336 . - . ID=Thaps7564;Parent=Thaps7564;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 554224 555336 . - 0 ID=Thaps7564;Parent=Thaps7564;rank=1 chr8 . exon 554224 555336 . - . ID=Thaps7564.1;Parent=Thaps7564;constitutive=1;rank=1 chr8 . repeat_region 565419 565496 . ? . description=dust chr8 . repeat_region 566060 566081 . ? . description=dust chr8 . repeat_region 568203 568216 . ? . description=dust chr8 . exon 559078 561290 . - . ID=Thaps23754.1;Parent=Thaps23754;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 565356 568379 . + . ID=Thaps23755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6W4];external_name=Thaps23755;logic_name=jgi_thaps3 chr8 ensembl transcript 565356 568379 . + . ID=Thaps23755;Parent=Thaps23755;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 565356 568379 . + 0 ID=Thaps23755;Parent=Thaps23755;rank=1 chr8 . exon 565356 568379 . + . ID=Thaps23755.1;Parent=Thaps23755;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 562655 564166 . + . ID=Thaps7567;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6W3];external_name=Thaps7567;logic_name=jgi_thaps3 chr8 ensembl transcript 562655 564166 . + . ID=Thaps7567;Parent=Thaps7567;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 562655 562936 . + 0 ID=Thaps7567;Parent=Thaps7567;rank=1 chr8 . exon 562655 562936 . + . ID=Thaps7567.1;Parent=Thaps7567;constitutive=1;rank=1 chr8 . CDS 563050 563499 . + 0 ID=Thaps7567;Parent=Thaps7567;rank=2 chr8 . exon 563050 563499 . + . ID=Thaps7567.2;Parent=Thaps7567;constitutive=1;rank=2 chr8 . CDS 563573 564166 . + 0 ID=Thaps7567;Parent=Thaps7567;rank=3 chr8 . exon 563573 564166 . + . ID=Thaps7567.3;Parent=Thaps7567;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 568566 569237 . - . ID=Thaps7569;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6W5];external_name=Thaps7569;logic_name=jgi_thaps3 chr8 ensembl transcript 568566 569237 . - . ID=Thaps7569;Parent=Thaps7569;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 568566 569237 . - 0 ID=Thaps7569;Parent=Thaps7569;rank=1 chr8 . exon 568566 569237 . - . ID=Thaps7569.1;Parent=Thaps7569;constitutive=1;rank=1 chr8 . repeat_region 569475 569496 . ? . description=trf chr8 ensembl protein_coding_gene 576066 576390 . + . ID=Thaps263389;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6W8];external_name=Thaps263389;logic_name=jgi_thaps3 chr8 ensembl transcript 576066 576390 . + . ID=Thaps263389;Parent=Thaps263389;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 576066 576390 . + 0 ID=Thaps263389;Parent=Thaps263389;rank=1 chr8 . exon 576066 576390 . + . ID=Thaps263389.1;Parent=Thaps263389;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 569693 570921 . + . ID=Thaps41547;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6W6];external_name=Thaps41547;logic_name=jgi_thaps3 chr8 ensembl transcript 569693 570921 . + . ID=Thaps41547;Parent=Thaps41547;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 569693 569740 . + 0 ID=Thaps41547;Parent=Thaps41547;rank=1 chr8 . exon 569693 569740 . + . ID=Thaps41547.1;Parent=Thaps41547;constitutive=1;rank=1 chr8 . CDS 569938 570671 . + 0 ID=Thaps41547;Parent=Thaps41547;rank=2 chr8 . exon 569938 570671 . + . ID=Thaps41547.2;Parent=Thaps41547;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 570774 570921 . + 0 ID=Thaps41547;Parent=Thaps41547;rank=3 chr8 . exon 570774 570921 . + . ID=Thaps41547.3;Parent=Thaps41547;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 572318 573409 . + . ID=Thaps41548;biotype=protein_coding;description=Dual function enzyme: UDP-glucose 4-epimerase [Source:UniProtKB/TrEMBL%3BAcc:B8C6W7];external_name=GALE3;logic_name=jgi_thaps3 chr8 ensembl transcript 572318 573409 . + . ID=Thaps41548;Parent=Thaps41548;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 572318 573409 . + 0 ID=Thaps41548;Parent=Thaps41548;rank=1 chr8 . exon 572318 573409 . + . ID=Thaps41548.1;Parent=Thaps41548;constitutive=1;rank=1 chr8 . repeat_region 581829 581836 . ? . description=dust chr8 ensembl protein_coding_gene 587602 587880 . + . ID=Thaps20292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X1];external_name=Thaps20292;logic_name=jgi_thaps3 chr8 ensembl transcript 587602 587880 . + . ID=Thaps20292;Parent=Thaps20292;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 587602 587880 . + 0 ID=Thaps20292;Parent=Thaps20292;rank=1 chr8 . exon 587602 587880 . + . ID=Thaps20292.1;Parent=Thaps20292;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 580497 583703 . - . ID=Thaps23757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6W9];external_name=Thaps23757;logic_name=jgi_thaps3 chr8 ensembl transcript 580497 583703 . - . ID=Thaps23757;Parent=Thaps23757;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 580497 581428 . - 0 ID=Thaps23757;Parent=Thaps23757;rank=4 chr8 . exon 580497 581428 . - . ID=Thaps23757.4;Parent=Thaps23757;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 581458 582334 . - 0 ID=Thaps23757;Parent=Thaps23757;rank=3 chr8 . exon 581458 582334 . - . ID=Thaps23757.3;Parent=Thaps23757;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 582391 583079 . - 0 ID=Thaps23757;Parent=Thaps23757;rank=2 chr8 . exon 582391 583079 . - . ID=Thaps23757.2;Parent=Thaps23757;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 583166 583703 . - 0 ID=Thaps23757;Parent=Thaps23757;rank=1 chr8 . exon 583166 583703 . - . ID=Thaps23757.1;Parent=Thaps23757;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 584495 586021 . - . ID=Thaps269352;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X0];external_name=Thaps269352;logic_name=jgi_thaps3 chr8 ensembl transcript 584495 586021 . - . ID=Thaps269352;Parent=Thaps269352;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 584495 585450 . - 0 ID=Thaps269352;Parent=Thaps269352;rank=2 chr8 . exon 584495 585450 . - . ID=Thaps269352.2;Parent=Thaps269352;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 585607 586021 . - 0 ID=Thaps269352;Parent=Thaps269352;rank=1 chr8 . exon 585607 586021 . - . ID=Thaps269352.1;Parent=Thaps269352;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 588426 589705 . + . ID=Thaps7576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X2];external_name=Thaps7576;logic_name=jgi_thaps3 chr8 ensembl transcript 588426 589705 . + . ID=Thaps7576;Parent=Thaps7576;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 588426 589312 . + 0 ID=Thaps7576;Parent=Thaps7576;rank=1 chr8 . exon 588426 589312 . + . ID=Thaps7576.1;Parent=Thaps7576;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 589345 589705 . + 0 ID=Thaps7576;Parent=Thaps7576;rank=2 chr8 ensembl protein_coding_gene 595549 598095 . - . ID=Thaps23762;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X4];external_name=Thaps23762;logic_name=jgi_thaps3 chr8 ensembl transcript 595549 598095 . - . ID=Thaps23762;Parent=Thaps23762;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 595549 598095 . - 0 ID=Thaps23762;Parent=Thaps23762;rank=1 chr8 . exon 595549 598095 . - . ID=Thaps23762.1;Parent=Thaps23762;constitutive=1;rank=1 chr8 ensembl gene 589909 592398 . - . ID=Thaps263391;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr8 ensembl transcript 589909 592398 . - . ID=Thaps263391;Parent=Thaps263391;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr8 . exon 589909 590870 . - . ID=Thaps263391.4;Parent=Thaps263391;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . exon 590959 591617 . - . ID=Thaps263391.3;Parent=Thaps263391;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . exon 591738 591787 . - . ID=Thaps263391.2;Parent=Thaps263391;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . exon 592352 592398 . - . ID=Thaps263391.1;Parent=Thaps263391;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 592902 593351 . + . ID=Thaps35932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X3];external_name=Thaps35932;logic_name=jgi_thaps3 chr8 ensembl transcript 592902 593351 . + . ID=Thaps35932;Parent=Thaps35932;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 592902 593017 . + 0 ID=Thaps35932;Parent=Thaps35932;rank=1 chr8 . exon 592902 593017 . + . ID=Thaps35932.1;Parent=Thaps35932;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 593234 593351 . + 0 ID=Thaps35932;Parent=Thaps35932;rank=2 chr8 . exon 593234 593351 . + . ID=Thaps35932.2;Parent=Thaps35932;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . exon 589345 589705 . + . ID=Thaps7576.2;Parent=Thaps7576;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . repeat_region 599275 599306 . ? . description=trf chr8 . repeat_region 599300 599370 . ? . description=trf chr8 ensembl protein_coding_gene 599638 600027 . - . ID=Thaps269355;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X5];external_name=Thaps269355;logic_name=jgi_thaps3 chr8 ensembl transcript 599638 600027 . - . ID=Thaps269355;Parent=Thaps269355;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 599638 600027 . - 0 ID=Thaps269355;Parent=Thaps269355;rank=1 chr8 . exon 599638 600027 . - . ID=Thaps269355.1;Parent=Thaps269355;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 600554 602051 . - . ID=Thaps7582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X6];external_name=Thaps7582;logic_name=jgi_thaps3 chr8 ensembl transcript 600554 602051 . - . ID=Thaps7582;Parent=Thaps7582;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 600554 600793 . - 0 ID=Thaps7582;Parent=Thaps7582;rank=2 chr8 . exon 600554 600793 . - . ID=Thaps7582.2;Parent=Thaps7582;constitutive=1;rank=2 chr8 . CDS 600870 602051 . - 0 ID=Thaps7582;Parent=Thaps7582;rank=1 chr8 . exon 600870 602051 . - . ID=Thaps7582.1;Parent=Thaps7582;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 605409 606437 . - . ID=Thaps7583;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X7];external_name=Thaps7583;logic_name=jgi_thaps3 chr8 ensembl transcript 605409 606437 . - . ID=Thaps7583;Parent=Thaps7583;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 605409 606437 . - 0 ID=Thaps7583;Parent=Thaps7583;rank=1 chr8 . exon 605409 606437 . - . ID=Thaps7583.1;Parent=Thaps7583;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 606926 611429 . - . ID=Thaps7584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X8];external_name=Thaps7584;logic_name=jgi_thaps3 chr8 ensembl transcript 606926 611429 . - . ID=Thaps7584;Parent=Thaps7584;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 606926 607873 . - 0 ID=Thaps7584;Parent=Thaps7584;rank=4 chr8 . exon 606926 607873 . - . ID=Thaps7584.4;Parent=Thaps7584;constitutive=1;rank=4 chr8 . CDS 607946 608782 . - 0 ID=Thaps7584;Parent=Thaps7584;rank=3 chr8 . exon 607946 608782 . - . ID=Thaps7584.3;Parent=Thaps7584;constitutive=1;rank=3 chr8 . CDS 608865 610647 . - 0 ID=Thaps7584;Parent=Thaps7584;rank=2 chr8 . CDS 611083 611429 . - 0 ID=Thaps7584;Parent=Thaps7584;rank=1 chr8 ensembl protein_coding_gene 612241 613635 . - . ID=Thaps16390;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6X9];external_name=Thaps16390;logic_name=jgi_thaps3 chr8 ensembl transcript 612241 613635 . - . ID=Thaps16390;Parent=Thaps16390;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 612241 612390 . - 0 ID=Thaps16390;Parent=Thaps16390;rank=6 chr8 . exon 612241 612390 . - . ID=Thaps16390.6;Parent=Thaps16390;constitutive=1;rank=6 chr8 . CDS 612442 612715 . - 0 ID=Thaps16390;Parent=Thaps16390;rank=5 chr8 . exon 612442 612715 . - . ID=Thaps16390.5;Parent=Thaps16390;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 612810 612896 . - 0 ID=Thaps16390;Parent=Thaps16390;rank=4 chr8 . exon 612810 612896 . - . ID=Thaps16390.4;Parent=Thaps16390;constitutive=1;rank=4 chr8 . CDS 612972 613196 . - 0 ID=Thaps16390;Parent=Thaps16390;rank=3 chr8 . exon 612972 613196 . - . ID=Thaps16390.3;Parent=Thaps16390;constitutive=1;rank=3 chr8 . CDS 613305 613401 . - 0 ID=Thaps16390;Parent=Thaps16390;rank=2 chr8 . exon 613305 613401 . - . ID=Thaps16390.2;Parent=Thaps16390;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 613521 613635 . - 0 ID=Thaps16390;Parent=Thaps16390;rank=1 chr8 . exon 613521 613635 . - . ID=Thaps16390.1;Parent=Thaps16390;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 618153 619028 . + . ID=Thaps36088;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y1];external_name=Thaps36088;logic_name=jgi_thaps3 chr8 ensembl transcript 618153 619028 . + . ID=Thaps36088;Parent=Thaps36088;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 618153 619028 . + 0 ID=Thaps36088;Parent=Thaps36088;rank=1 chr8 . exon 618153 619028 . + . ID=Thaps36088.1;Parent=Thaps36088;constitutive=1;rank=1 chr8 . exon 608865 610647 . - . ID=Thaps7584.2;Parent=Thaps7584;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . exon 611083 611429 . - . ID=Thaps7584.1;Parent=Thaps7584;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 614267 617790 . + . ID=Thaps7586;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y0];external_name=Thaps7586;logic_name=jgi_thaps3 chr8 ensembl transcript 614267 617790 . + . ID=Thaps7586;Parent=Thaps7586;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 614267 614593 . + 0 ID=Thaps7586;Parent=Thaps7586;rank=1 chr8 . exon 614267 614593 . + . ID=Thaps7586.1;Parent=Thaps7586;constitutive=1;rank=1 chr8 . CDS 614674 617790 . + 0 ID=Thaps7586;Parent=Thaps7586;rank=2 chr8 . exon 614674 617790 . + . ID=Thaps7586.2;Parent=Thaps7586;constitutive=1;rank=2 chr8 . repeat_region 620191 620210 . ? . description=trf chr8 . repeat_region 620191 620210 . ? . description=dust chr8 . repeat_region 624540 624559 . ? . description=trf chr8 . repeat_region 627718 627737 . ? . description=trf chr8 ensembl tRNA_gene 622424 622525 . + . ID=EPrTPOG00000000047;biotype=tRNA;description=tRNA-Pro for anticodon AGG [Source:TRNASCAN_SE%3BAcc:tRNA-Pro];external_name=tRNA-Pro;logic_name=ncrna_eg chr8 ensembl transcript 622424 622525 . + . ID=EPrTPOT00000000047;Parent=EPrTPOG00000000047;biotype=tRNA;logic_name=ncrna_eg chr8 . exon 622424 622525 . + . ID=EPrTPOE00000000047;Parent=EPrTPOT00000000047;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 625122 626495 . - . ID=Thaps23766;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y5];external_name=Thaps23766;logic_name=jgi_thaps3 chr8 ensembl transcript 625122 626495 . - . ID=Thaps23766;Parent=Thaps23766;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 625122 626495 . - 0 ID=Thaps23766;Parent=Thaps23766;rank=1 chr8 . exon 625122 626495 . - . ID=Thaps23766.1;Parent=Thaps23766;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 622958 623956 . - . ID=Thaps263396;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y4];external_name=Thaps263396;logic_name=jgi_thaps3 chr8 ensembl transcript 622958 623956 . - . ID=Thaps263396;Parent=Thaps263396;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 622958 623956 . - 0 ID=Thaps263396;Parent=Thaps263396;rank=1 chr8 . exon 622958 623956 . - . ID=Thaps263396.1;Parent=Thaps263396;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 621525 621956 . - . ID=Thaps36013;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y3];external_name=Thaps36013;logic_name=jgi_thaps3 chr8 ensembl transcript 621525 621956 . - . ID=Thaps36013;Parent=Thaps36013;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 621525 621956 . - 0 ID=Thaps36013;Parent=Thaps36013;rank=1 chr8 . exon 621525 621956 . - . ID=Thaps36013.1;Parent=Thaps36013;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 619273 620679 . - . ID=Thaps7588;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y2];external_name=Thaps7588;logic_name=jgi_thaps3 chr8 ensembl transcript 619273 620679 . - . ID=Thaps7588;Parent=Thaps7588;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 619273 620679 . - 0 ID=Thaps7588;Parent=Thaps7588;rank=1 chr8 . exon 619273 620679 . - . ID=Thaps7588.1;Parent=Thaps7588;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 633568 636670 . - . ID=Thaps23769;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y8];external_name=Thaps23769;logic_name=jgi_thaps3 chr8 ensembl transcript 633568 636670 . - . ID=Thaps23769;Parent=Thaps23769;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 633568 634747 . - 0 ID=Thaps23769;Parent=Thaps23769;rank=2 chr8 . exon 633568 634747 . - . ID=Thaps23769.2;Parent=Thaps23769;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 634827 636670 . - 0 ID=Thaps23769;Parent=Thaps23769;rank=1 chr8 . exon 634827 636670 . - . ID=Thaps23769.1;Parent=Thaps23769;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 629679 630470 . + . ID=Thaps263397;biotype=protein_coding;description=Phosphoglycerate mutase [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y6];external_name=PGAM4;logic_name=jgi_thaps3 chr8 ensembl transcript 629679 630470 . + . ID=Thaps263397;Parent=Thaps263397;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 629679 630107 . + 0 ID=Thaps263397;Parent=Thaps263397;rank=1 chr8 . exon 629679 630107 . + . ID=Thaps263397.1;Parent=Thaps263397;constitutive=1;rank=1 chr8 . CDS 630255 630470 . + 0 ID=Thaps263397;Parent=Thaps263397;rank=2 chr8 . exon 630255 630470 . + . ID=Thaps263397.2;Parent=Thaps263397;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 630897 632748 . - . ID=Thaps29166;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y7];external_name=Thaps29166;logic_name=jgi_thaps3 chr8 ensembl transcript 630897 632748 . - . ID=Thaps29166;Parent=Thaps29166;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 630897 631353 . - 0 ID=Thaps29166;Parent=Thaps29166;rank=2 chr8 . exon 630897 631353 . - . ID=Thaps29166.2;Parent=Thaps29166;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 631544 632748 . - 0 ID=Thaps29166;Parent=Thaps29166;rank=1 chr8 . exon 631544 632748 . - . ID=Thaps29166.1;Parent=Thaps29166;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 637378 638415 . - . ID=Thaps7594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Y9];external_name=Thaps7594;logic_name=jgi_thaps3 chr8 ensembl transcript 637378 638415 . - . ID=Thaps7594;Parent=Thaps7594;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 637378 638415 . - 0 ID=Thaps7594;Parent=Thaps7594;rank=1 chr8 . exon 637378 638415 . - . ID=Thaps7594.1;Parent=Thaps7594;constitutive=1;rank=1 chr8 . repeat_region 643544 643552 . ? . description=dust chr8 . repeat_region 646646 646704 . ? . description=trf chr8 ensembl tRNA_gene 648053 648148 . + . ID=EPrTPOG00000000030;biotype=tRNA;description=tRNA-Ser for anticodon GCU [Source:TRNASCAN_SE%3BAcc:tRNA-Ser];external_name=tRNA-Ser;logic_name=ncrna_eg chr8 ensembl transcript 648053 648148 . + . ID=EPrTPOT00000000024;Parent=EPrTPOG00000000030;biotype=tRNA;logic_name=ncrna_eg chr8 . exon 648053 648148 . + . ID=EPrTPOE00000000030;Parent=EPrTPOT00000000024;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 644695 647760 . - . ID=Thaps23770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z3];external_name=Thaps23770;logic_name=jgi_thaps3 chr8 ensembl transcript 644695 647760 . - . ID=Thaps23770;Parent=Thaps23770;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 644695 647760 . - 0 ID=Thaps23770;Parent=Thaps23770;rank=1 chr8 . exon 644695 647760 . - . ID=Thaps23770.1;Parent=Thaps23770;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 639167 640276 . - . ID=Thaps7595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z0];external_name=Thaps7595;logic_name=jgi_thaps3 chr8 ensembl transcript 639167 640276 . - . ID=Thaps7595;Parent=Thaps7595;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 639167 640276 . - 0 ID=Thaps7595;Parent=Thaps7595;rank=1 chr8 . exon 639167 640276 . - . ID=Thaps7595.1;Parent=Thaps7595;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 640555 641985 . + . ID=Thaps7596;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z1];external_name=Thaps7596;logic_name=jgi_thaps3 chr8 ensembl transcript 640555 641985 . + . ID=Thaps7596;Parent=Thaps7596;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 640555 640898 . + 0 ID=Thaps7596;Parent=Thaps7596;rank=1 chr8 . exon 640555 640898 . + . ID=Thaps7596.1;Parent=Thaps7596;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 640982 641595 . + 0 ID=Thaps7596;Parent=Thaps7596;rank=2 chr8 . exon 640982 641595 . + . ID=Thaps7596.2;Parent=Thaps7596;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 641675 641710 . + 0 ID=Thaps7596;Parent=Thaps7596;rank=3 chr8 . exon 641675 641710 . + . ID=Thaps7596.3;Parent=Thaps7596;constitutive=1;rank=3 chr8 . CDS 641939 641985 . + 0 ID=Thaps7596;Parent=Thaps7596;rank=4 chr8 . exon 641939 641985 . + . ID=Thaps7596.4;Parent=Thaps7596;constitutive=1;ensembl_end_phase=2;rank=4 chr8 ensembl protein_coding_gene 642896 644567 . + . ID=Thaps7597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z2];external_name=Thaps7597;logic_name=jgi_thaps3 chr8 ensembl transcript 642896 644567 . + . ID=Thaps7597;Parent=Thaps7597;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 642896 642982 . + 0 ID=Thaps7597;Parent=Thaps7597;rank=1 chr8 . exon 642896 642982 . + . ID=Thaps7597.1;Parent=Thaps7597;constitutive=1;rank=1 chr8 . CDS 643011 643331 . + 0 ID=Thaps7597;Parent=Thaps7597;rank=2 chr8 . exon 643011 643331 . + . ID=Thaps7597.2;Parent=Thaps7597;constitutive=1;rank=2 chr8 . CDS 643422 643913 . + 0 ID=Thaps7597;Parent=Thaps7597;rank=3 chr8 . exon 643422 643913 . + . ID=Thaps7597.3;Parent=Thaps7597;constitutive=1;rank=3 chr8 . CDS 644052 644567 . + 0 ID=Thaps7597;Parent=Thaps7597;rank=4 chr8 . exon 644052 644567 . + . ID=Thaps7597.4;Parent=Thaps7597;constitutive=1;rank=4 chr8 . repeat_region 654519 654581 . - . description=Copia6LTR_TP chr8 ensembl protein_coding_gene 648616 650012 . - . ID=Thaps263399;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z4];external_name=Thaps263399;logic_name=jgi_thaps3 chr8 ensembl transcript 648616 650012 . - . ID=Thaps263399;Parent=Thaps263399;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 648616 648796 . - 0 ID=Thaps263399;Parent=Thaps263399;rank=2 chr8 . exon 648616 648796 . - . ID=Thaps263399.2;Parent=Thaps263399;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 648821 650012 . - 0 ID=Thaps263399;Parent=Thaps263399;rank=1 chr8 . exon 648821 650012 . - . ID=Thaps263399.1;Parent=Thaps263399;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 650406 652476 . + . ID=Thaps7600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z5];external_name=Thaps7600;logic_name=jgi_thaps3 chr8 ensembl transcript 650406 652476 . + . ID=Thaps7600;Parent=Thaps7600;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 650406 650937 . + 0 ID=Thaps7600;Parent=Thaps7600;rank=1 chr8 . exon 650406 650937 . + . ID=Thaps7600.1;Parent=Thaps7600;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 651022 652394 . + 0 ID=Thaps7600;Parent=Thaps7600;rank=2 chr8 . exon 651022 652394 . + . ID=Thaps7600.2;Parent=Thaps7600;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 652459 652476 . + 0 ID=Thaps7600;Parent=Thaps7600;rank=3 chr8 . exon 652459 652476 . + . ID=Thaps7600.3;Parent=Thaps7600;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 652555 654276 . - . ID=Thaps7601;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z6];external_name=Thaps7601;logic_name=jgi_thaps3 chr8 ensembl transcript 652555 654276 . - . ID=Thaps7601;Parent=Thaps7601;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 652555 654276 . - 0 ID=Thaps7601;Parent=Thaps7601;rank=1 chr8 . exon 652555 654276 . - . ID=Thaps7601.1;Parent=Thaps7601;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 654816 656954 . + . ID=Thaps7602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z7];external_name=Thaps7602;logic_name=jgi_thaps3 chr8 ensembl transcript 654816 656954 . + . ID=Thaps7602;Parent=Thaps7602;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 654816 655811 . + 0 ID=Thaps7602;Parent=Thaps7602;rank=1 chr8 . exon 654816 655811 . + . ID=Thaps7602.1;Parent=Thaps7602;constitutive=1;rank=1 chr8 . CDS 655890 656954 . + 0 ID=Thaps7602;Parent=Thaps7602;rank=2 chr8 . exon 655890 656954 . + . ID=Thaps7602.2;Parent=Thaps7602;constitutive=1;rank=2 chr8 . repeat_region 658811 658831 . ? . description=trf chr8 . repeat_region 658906 658996 . - . description=Copia9LTR_TP chr8 . repeat_region 660201 660241 . ? . description=trf chr8 . repeat_region 660201 660247 . ? . description=trf chr8 . repeat_region 663169 663208 . ? . description=trf chr8 . repeat_region 664148 664320 . ? . description=trf chr8 . repeat_region 668429 668460 . ? . description=trf chr8 ensembl protein_coding_gene 661729 662313 . - . ID=Thaps23771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z9];external_name=Thaps23771;logic_name=jgi_thaps3 chr8 ensembl transcript 661729 662313 . - . ID=Thaps23771;Parent=Thaps23771;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 661729 662313 . - 0 ID=Thaps23771;Parent=Thaps23771;rank=1 chr8 . exon 661729 662313 . - . ID=Thaps23771.1;Parent=Thaps23771;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 664991 668248 . - . ID=Thaps23773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C701];external_name=Thaps23773;logic_name=jgi_thaps3 chr8 ensembl transcript 664991 668248 . - . ID=Thaps23773;Parent=Thaps23773;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 664991 668248 . - 0 ID=Thaps23773;Parent=Thaps23773;rank=1 chr8 . exon 664991 668248 . - . ID=Thaps23773.1;Parent=Thaps23773;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 662813 663415 . + . ID=Thaps41566;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C700];external_name=Thaps41566;logic_name=jgi_thaps3 chr8 ensembl transcript 662813 663415 . + . ID=Thaps41566;Parent=Thaps41566;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 662813 663056 . + 0 ID=Thaps41566;Parent=Thaps41566;rank=1 chr8 . exon 662813 663056 . + . ID=Thaps41566.1;Parent=Thaps41566;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 663159 663415 . + 0 ID=Thaps41566;Parent=Thaps41566;rank=2 chr8 . exon 663159 663415 . + . ID=Thaps41566.2;Parent=Thaps41566;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 659433 661183 . + . ID=Thaps7603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C6Z8];external_name=Thaps7603;logic_name=jgi_thaps3 chr8 ensembl transcript 659433 661183 . + . ID=Thaps7603;Parent=Thaps7603;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 659433 659649 . + 0 ID=Thaps7603;Parent=Thaps7603;rank=1 chr8 . exon 659433 659649 . + . ID=Thaps7603.1;Parent=Thaps7603;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 659753 659826 . + 0 ID=Thaps7603;Parent=Thaps7603;rank=2 chr8 . exon 659753 659826 . + . ID=Thaps7603.2;Parent=Thaps7603;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 659937 660366 . + 0 ID=Thaps7603;Parent=Thaps7603;rank=3 chr8 . exon 659937 660366 . + . ID=Thaps7603.3;Parent=Thaps7603;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 660450 660546 . + 0 ID=Thaps7603;Parent=Thaps7603;rank=4 chr8 . exon 660450 660546 . + . ID=Thaps7603.4;Parent=Thaps7603;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 660644 660675 . + 0 ID=Thaps7603;Parent=Thaps7603;rank=5 chr8 . exon 660644 660675 . + . ID=Thaps7603.5;Parent=Thaps7603;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . CDS 660800 660881 . + 0 ID=Thaps7603;Parent=Thaps7603;rank=6 chr8 . exon 660800 660881 . + . ID=Thaps7603.6;Parent=Thaps7603;constitutive=1;ensembl_end_phase=1;rank=6 chr8 . CDS 660979 661183 . + 0 ID=Thaps7603;Parent=Thaps7603;rank=7 chr8 . exon 660979 661183 . + . ID=Thaps7603.7;Parent=Thaps7603;constitutive=1;ensembl_end_phase=1;rank=7 chr8 . repeat_region 668912 668939 . ? . description=dust chr8 . repeat_region 676394 676401 . ? . description=dust chr8 ensembl protein_coding_gene 675294 676301 . + . ID=Thaps26002;biotype=protein_coding;description=NADH dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C704];external_name=Thaps26002;logic_name=jgi_thaps3 chr8 ensembl transcript 675294 676301 . + . ID=Thaps26002;Parent=Thaps26002;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 675294 675389 . + 0 ID=Thaps26002;Parent=Thaps26002;rank=1 chr8 . exon 675294 675389 . + . ID=Thaps26002.1;Parent=Thaps26002;constitutive=1;rank=1 chr8 . CDS 675612 676301 . + 0 ID=Thaps26002;Parent=Thaps26002;rank=2 chr8 . exon 675612 676301 . + . ID=Thaps26002.2;Parent=Thaps26002;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 677608 678136 . - . ID=Thaps35985;biotype=protein_coding;description=8-kd dynein light chain%2C DLC8%2C pin [Source:UniProtKB/TrEMBL%3BAcc:B8C706];external_name=Thaps35985;logic_name=jgi_thaps3 chr8 ensembl transcript 677608 678136 . - . ID=Thaps35985;Parent=Thaps35985;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 677608 677677 . - 0 ID=Thaps35985;Parent=Thaps35985;rank=3 chr8 . exon 677608 677677 . - . ID=Thaps35985.3;Parent=Thaps35985;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 677777 677829 . - 0 ID=Thaps35985;Parent=Thaps35985;rank=2 chr8 . exon 677777 677829 . - . ID=Thaps35985.2;Parent=Thaps35985;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 678026 678136 . - 0 ID=Thaps35985;Parent=Thaps35985;rank=1 chr8 . exon 678026 678136 . - . ID=Thaps35985.1;Parent=Thaps35985;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 668585 670128 . + . ID=Thaps7607;biotype=protein_coding;description=Methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C702];external_name=Thaps7607;logic_name=jgi_thaps3 chr8 ensembl transcript 668585 670128 . + . ID=Thaps7607;Parent=Thaps7607;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 668585 668714 . + 0 ID=Thaps7607;Parent=Thaps7607;rank=1 chr8 . exon 668585 668714 . + . ID=Thaps7607.1;Parent=Thaps7607;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 668941 669228 . + 0 ID=Thaps7607;Parent=Thaps7607;rank=2 chr8 . exon 668941 669228 . + . ID=Thaps7607.2;Parent=Thaps7607;constitutive=1;rank=2 chr8 . CDS 669326 670128 . + 0 ID=Thaps7607;Parent=Thaps7607;rank=3 chr8 . exon 669326 670128 . + . ID=Thaps7607.3;Parent=Thaps7607;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 672838 674557 . + . ID=Thaps7608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C703];external_name=Thaps7608;logic_name=jgi_thaps3 chr8 ensembl transcript 672838 674557 . + . ID=Thaps7608;Parent=Thaps7608;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 672838 673054 . + 0 ID=Thaps7608;Parent=Thaps7608;rank=1 chr8 . exon 672838 673054 . + . ID=Thaps7608.1;Parent=Thaps7608;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 673171 673235 . + 0 ID=Thaps7608;Parent=Thaps7608;rank=2 chr8 . exon 673171 673235 . + . ID=Thaps7608.2;Parent=Thaps7608;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 673346 673742 . + 0 ID=Thaps7608;Parent=Thaps7608;rank=3 chr8 . exon 673346 673742 . + . ID=Thaps7608.3;Parent=Thaps7608;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 673826 673922 . + 0 ID=Thaps7608;Parent=Thaps7608;rank=4 chr8 . exon 673826 673922 . + . ID=Thaps7608.4;Parent=Thaps7608;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 674019 674050 . + 0 ID=Thaps7608;Parent=Thaps7608;rank=5 chr8 . exon 674019 674050 . + . ID=Thaps7608.5;Parent=Thaps7608;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . CDS 674174 674255 . + 0 ID=Thaps7608;Parent=Thaps7608;rank=6 chr8 . exon 674174 674255 . + . ID=Thaps7608.6;Parent=Thaps7608;constitutive=1;ensembl_end_phase=1;rank=6 chr8 . CDS 674353 674557 . + 0 ID=Thaps7608;Parent=Thaps7608;rank=7 chr8 . exon 674353 674557 . + . ID=Thaps7608.7;Parent=Thaps7608;constitutive=1;ensembl_end_phase=1;rank=7 chr8 ensembl protein_coding_gene 676542 677240 . - . ID=Thaps7610;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C705];external_name=Thaps7610;logic_name=jgi_thaps3 chr8 ensembl transcript 676542 677240 . - . ID=Thaps7610;Parent=Thaps7610;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 676542 677240 . - 0 ID=Thaps7610;Parent=Thaps7610;rank=1 chr8 . exon 676542 677240 . - . ID=Thaps7610.1;Parent=Thaps7610;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 678488 679861 . + . ID=Thaps7611;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C707];external_name=Thaps7611;logic_name=jgi_thaps3 chr8 ensembl transcript 678488 679861 . + . ID=Thaps7611;Parent=Thaps7611;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 678488 679861 . + 0 ID=Thaps7611;Parent=Thaps7611;rank=1 chr8 . exon 678488 679861 . + . ID=Thaps7611.1;Parent=Thaps7611;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 679932 681212 . - . ID=Thaps23775;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C708];external_name=Thaps23775;logic_name=jgi_thaps3 chr8 ensembl transcript 679932 681212 . - . ID=Thaps23775;Parent=Thaps23775;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 679932 681212 . - 0 ID=Thaps23775;Parent=Thaps23775;rank=1 chr8 . exon 679932 681212 . - . ID=Thaps23775.1;Parent=Thaps23775;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 683016 684527 . + . ID=Thaps23776;biotype=protein_coding;description=Eukaryotic protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C710];external_name=Thaps23776;logic_name=jgi_thaps3 chr8 ensembl transcript 683016 684527 . + . ID=Thaps23776;Parent=Thaps23776;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 683016 684527 . + 0 ID=Thaps23776;Parent=Thaps23776;rank=1 chr8 . exon 683016 684527 . + . ID=Thaps23776.1;Parent=Thaps23776;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 684658 685497 . + . ID=Thaps23777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C711];external_name=Thaps23777;logic_name=jgi_thaps3 chr8 ensembl transcript 684658 685497 . + . ID=Thaps23777;Parent=Thaps23777;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 684658 685497 . + 0 ID=Thaps23777;Parent=Thaps23777;rank=1 chr8 . exon 684658 685497 . + . ID=Thaps23777.1;Parent=Thaps23777;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 686794 688901 . + . ID=Thaps23778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C712];external_name=Thaps23778;logic_name=jgi_thaps3 chr8 ensembl transcript 686794 688901 . + . ID=Thaps23778;Parent=Thaps23778;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 686794 687081 . + 0 ID=Thaps23778;Parent=Thaps23778;rank=1 chr8 . exon 686794 687081 . + . ID=Thaps23778.1;Parent=Thaps23778;constitutive=1;rank=1 chr8 . CDS 687191 687897 . + 0 ID=Thaps23778;Parent=Thaps23778;rank=2 chr8 . exon 687191 687897 . + . ID=Thaps23778.2;Parent=Thaps23778;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 687992 688901 . + 0 ID=Thaps23778;Parent=Thaps23778;rank=3 chr8 . exon 687992 688901 . + . ID=Thaps23778.3;Parent=Thaps23778;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 681626 682239 . + . ID=Thaps7613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C709];external_name=Thaps7613;logic_name=jgi_thaps3 chr8 ensembl transcript 681626 682239 . + . ID=Thaps7613;Parent=Thaps7613;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 681626 681693 . + 0 ID=Thaps7613;Parent=Thaps7613;rank=1 chr8 . exon 681626 681693 . + . ID=Thaps7613.1;Parent=Thaps7613;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 681819 682239 . + 0 ID=Thaps7613;Parent=Thaps7613;rank=2 chr8 . exon 681819 682239 . + . ID=Thaps7613.2;Parent=Thaps7613;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . repeat_region 692337 692349 . ? . description=dust chr8 ensembl protein_coding_gene 690499 692073 . - . ID=Thaps23779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C714];external_name=Thaps23779;logic_name=jgi_thaps3 chr8 ensembl transcript 690499 692073 . - . ID=Thaps23779;Parent=Thaps23779;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 690499 691751 . - 0 ID=Thaps23779;Parent=Thaps23779;rank=2 chr8 . exon 690499 691751 . - . ID=Thaps23779.2;Parent=Thaps23779;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 692007 692073 . - 0 ID=Thaps23779;Parent=Thaps23779;rank=1 chr8 . exon 692007 692073 . - . ID=Thaps23779.1;Parent=Thaps23779;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 692735 696015 . + . ID=Thaps23780;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C715];external_name=Thaps23780;logic_name=jgi_thaps3 chr8 ensembl transcript 692735 696015 . + . ID=Thaps23780;Parent=Thaps23780;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 692735 693521 . + 0 ID=Thaps23780;Parent=Thaps23780;rank=1 chr8 . exon 692735 693521 . + . ID=Thaps23780.1;Parent=Thaps23780;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 693605 693811 . + 0 ID=Thaps23780;Parent=Thaps23780;rank=2 chr8 . exon 693605 693811 . + . ID=Thaps23780.2;Parent=Thaps23780;constitutive=1;rank=2 chr8 . CDS 693893 694059 . + 0 ID=Thaps23780;Parent=Thaps23780;rank=3 chr8 . exon 693893 694059 . + . ID=Thaps23780.3;Parent=Thaps23780;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 694158 694284 . + 0 ID=Thaps23780;Parent=Thaps23780;rank=4 chr8 . exon 694158 694284 . + . ID=Thaps23780.4;Parent=Thaps23780;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 694367 695360 . + 0 ID=Thaps23780;Parent=Thaps23780;rank=5 chr8 . exon 694367 695360 . + . ID=Thaps23780.5;Parent=Thaps23780;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 695439 696015 . + 0 ID=Thaps23780;Parent=Thaps23780;rank=6 chr8 . exon 695439 696015 . + . ID=Thaps23780.6;Parent=Thaps23780;constitutive=1;ensembl_end_phase=1;rank=6 chr8 ensembl protein_coding_gene 696873 697974 . - . ID=Thaps263403;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C716];external_name=Thaps263403;logic_name=jgi_thaps3 chr8 ensembl transcript 696873 697974 . - . ID=Thaps263403;Parent=Thaps263403;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 696873 697079 . - 0 ID=Thaps263403;Parent=Thaps263403;rank=5 chr8 . exon 696873 697079 . - . ID=Thaps263403.5;Parent=Thaps263403;constitutive=1;rank=5 chr8 . CDS 697107 697337 . - 0 ID=Thaps263403;Parent=Thaps263403;rank=4 chr8 . exon 697107 697337 . - . ID=Thaps263403.4;Parent=Thaps263403;constitutive=1;rank=4 chr8 . CDS 697422 697587 . - 0 ID=Thaps263403;Parent=Thaps263403;rank=3 chr8 . exon 697422 697587 . - . ID=Thaps263403.3;Parent=Thaps263403;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 697694 697806 . - 0 ID=Thaps263403;Parent=Thaps263403;rank=2 chr8 . exon 697694 697806 . - . ID=Thaps263403.2;Parent=Thaps263403;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 697922 697974 . - 0 ID=Thaps263403;Parent=Thaps263403;rank=1 chr8 . exon 697922 697974 . - . ID=Thaps263403.1;Parent=Thaps263403;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 698456 699733 . - . ID=Thaps35982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C717];external_name=Thaps35982;logic_name=jgi_thaps3 chr8 ensembl transcript 698456 699733 . - . ID=Thaps35982;Parent=Thaps35982;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 698456 698972 . - 0 ID=Thaps35982;Parent=Thaps35982;rank=3 chr8 . exon 698456 698972 . - . ID=Thaps35982.3;Parent=Thaps35982;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 699087 699306 . - 0 ID=Thaps35982;Parent=Thaps35982;rank=2 chr8 . CDS 699430 699733 . - 0 ID=Thaps35982;Parent=Thaps35982;rank=1 chr8 ensembl protein_coding_gene 689067 690074 . - . ID=Thaps7617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C713];external_name=Thaps7617;logic_name=jgi_thaps3 chr8 ensembl transcript 689067 690074 . - . ID=Thaps7617;Parent=Thaps7617;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 689067 690074 . - 0 ID=Thaps7617;Parent=Thaps7617;rank=1 chr8 . exon 689067 690074 . - . ID=Thaps7617.1;Parent=Thaps7617;constitutive=1;rank=1 chr8 . repeat_region 706581 706601 . ? . description=trf chr8 ensembl protein_coding_gene 701007 702641 . + . ID=Thaps23782;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C718];external_name=Thaps23782;logic_name=jgi_thaps3 chr8 ensembl transcript 701007 702641 . + . ID=Thaps23782;Parent=Thaps23782;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 701007 702641 . + 0 ID=Thaps23782;Parent=Thaps23782;rank=1 chr8 . exon 701007 702641 . + . ID=Thaps23782.1;Parent=Thaps23782;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 707046 708077 . + . ID=Thaps23784;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C721];external_name=Thaps23784;logic_name=jgi_thaps3 chr8 ensembl transcript 707046 708077 . + . ID=Thaps23784;Parent=Thaps23784;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 707046 708077 . + 0 ID=Thaps23784;Parent=Thaps23784;rank=1 chr8 . exon 707046 708077 . + . ID=Thaps23784.1;Parent=Thaps23784;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 704647 706466 . - . ID=Thaps35933;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C720];external_name=Thaps35933;logic_name=jgi_thaps3 chr8 ensembl transcript 704647 706466 . - . ID=Thaps35933;Parent=Thaps35933;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 704647 705306 . - 0 ID=Thaps35933;Parent=Thaps35933;rank=4 chr8 . exon 704647 705306 . - . ID=Thaps35933.4;Parent=Thaps35933;constitutive=1;rank=4 chr8 . CDS 705420 705566 . - 0 ID=Thaps35933;Parent=Thaps35933;rank=3 chr8 . exon 705420 705566 . - . ID=Thaps35933.3;Parent=Thaps35933;constitutive=1;rank=3 chr8 . CDS 705615 706214 . - 0 ID=Thaps35933;Parent=Thaps35933;rank=2 chr8 . exon 705615 706214 . - . ID=Thaps35933.2;Parent=Thaps35933;constitutive=1;rank=2 chr8 . CDS 706332 706466 . - 0 ID=Thaps35933;Parent=Thaps35933;rank=1 chr8 . exon 706332 706466 . - . ID=Thaps35933.1;Parent=Thaps35933;constitutive=1;rank=1 chr8 . exon 699087 699306 . - . ID=Thaps35982.2;Parent=Thaps35982;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . exon 699430 699733 . - . ID=Thaps35982.1;Parent=Thaps35982;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 702971 704299 . - . ID=Thaps7623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C719];external_name=Thaps7623;logic_name=jgi_thaps3 chr8 ensembl transcript 702971 704299 . - . ID=Thaps7623;Parent=Thaps7623;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 702971 703515 . - 0 ID=Thaps7623;Parent=Thaps7623;rank=3 chr8 . exon 702971 703515 . - . ID=Thaps7623.3;Parent=Thaps7623;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 703583 703730 . - 0 ID=Thaps7623;Parent=Thaps7623;rank=2 chr8 . exon 703583 703730 . - . ID=Thaps7623.2;Parent=Thaps7623;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 703811 704299 . - 0 ID=Thaps7623;Parent=Thaps7623;rank=1 chr8 . exon 703811 704299 . - . ID=Thaps7623.1;Parent=Thaps7623;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 708217 710208 . - . ID=Thaps7626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C722];external_name=Thaps7626;logic_name=jgi_thaps3 chr8 ensembl transcript 708217 710208 . - . ID=Thaps7626;Parent=Thaps7626;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 708217 708667 . - 0 ID=Thaps7626;Parent=Thaps7626;rank=2 chr8 . exon 708217 708667 . - . ID=Thaps7626.2;Parent=Thaps7626;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 708755 710208 . - 0 ID=Thaps7626;Parent=Thaps7626;rank=1 chr8 . repeat_region 712741 712802 . ? . description=dust chr8 . repeat_region 713423 713517 . ? . description=dust chr8 ensembl protein_coding_gene 714665 715856 . - . ID=Thaps263404;biotype=protein_coding;description=Probable papain cysteine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C725];external_name=Thaps263404;logic_name=jgi_thaps3 chr8 ensembl transcript 714665 715856 . - . ID=Thaps263404;Parent=Thaps263404;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 714665 714688 . - 0 ID=Thaps263404;Parent=Thaps263404;rank=6 chr8 . exon 714665 714688 . - . ID=Thaps263404.6;Parent=Thaps263404;constitutive=1;rank=6 chr8 . CDS 714763 714952 . - 0 ID=Thaps263404;Parent=Thaps263404;rank=5 chr8 . exon 714763 714952 . - . ID=Thaps263404.5;Parent=Thaps263404;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 715042 715089 . - 0 ID=Thaps263404;Parent=Thaps263404;rank=4 chr8 . exon 715042 715089 . - . ID=Thaps263404.4;Parent=Thaps263404;constitutive=1;rank=4 chr8 . CDS 715204 715465 . - 0 ID=Thaps263404;Parent=Thaps263404;rank=3 chr8 . exon 715204 715465 . - . ID=Thaps263404.3;Parent=Thaps263404;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 715574 715647 . - 0 ID=Thaps263404;Parent=Thaps263404;rank=2 chr8 . exon 715574 715647 . - . ID=Thaps263404.2;Parent=Thaps263404;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 715723 715856 . - 0 ID=Thaps263404;Parent=Thaps263404;rank=1 chr8 . exon 715723 715856 . - . ID=Thaps263404.1;Parent=Thaps263404;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . exon 708755 710208 . - . ID=Thaps7626.1;Parent=Thaps7626;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 711184 713133 . - . ID=Thaps7627;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C723];external_name=Thaps7627;logic_name=jgi_thaps3 chr8 ensembl transcript 711184 713133 . - . ID=Thaps7627;Parent=Thaps7627;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 711184 713133 . - 0 ID=Thaps7627;Parent=Thaps7627;rank=1 chr8 . exon 711184 713133 . - . ID=Thaps7627.1;Parent=Thaps7627;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 713577 714440 . + . ID=Thaps7628;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C724];external_name=Thaps7628;logic_name=jgi_thaps3 chr8 ensembl transcript 713577 714440 . + . ID=Thaps7628;Parent=Thaps7628;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 713577 714440 . + 0 ID=Thaps7628;Parent=Thaps7628;rank=1 chr8 . exon 713577 714440 . + . ID=Thaps7628.1;Parent=Thaps7628;constitutive=1;rank=1 chr8 . repeat_region 726956 726999 . ? . description=trf chr8 ensembl protein_coding_gene 718545 723635 . - . ID=Thaps14707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C726];external_name=Thaps14707;logic_name=jgi_thaps3 chr8 ensembl transcript 718545 723635 . - . ID=Thaps14707;Parent=Thaps14707;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 718545 718780 . - 0 ID=Thaps14707;Parent=Thaps14707;rank=2 chr8 . exon 718545 718780 . - . ID=Thaps14707.2;Parent=Thaps14707;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 722618 723635 . - 0 ID=Thaps14707;Parent=Thaps14707;rank=1 chr8 . exon 722618 723635 . - . ID=Thaps14707.1;Parent=Thaps14707;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 725382 727247 . + . ID=Thaps7630;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C727];external_name=Thaps7630;logic_name=jgi_thaps3 chr8 ensembl transcript 725382 727247 . + . ID=Thaps7630;Parent=Thaps7630;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 725382 726203 . + 0 ID=Thaps7630;Parent=Thaps7630;rank=1 chr8 . exon 725382 726203 . + . ID=Thaps7630.1;Parent=Thaps7630;constitutive=1;rank=1 chr8 . CDS 726438 727247 . + 0 ID=Thaps7630;Parent=Thaps7630;rank=2 chr8 . exon 726438 727247 . + . ID=Thaps7630.2;Parent=Thaps7630;constitutive=1;rank=2 chr8 . repeat_region 735030 735280 . - . description=TE2c_TP chr8 . repeat_region 735183 735236 . ? . description=dust chr8 . repeat_region 736194 736213 . ? . description=dust chr8 . repeat_region 736456 736705 . + . description=Harbinger4_TP chr8 . repeat_region 736684 736691 . ? . description=dust chr8 . repeat_region 736702 736803 . - . description=TE2c_TP chr8 . repeat_region 736822 739231 . + . description=Harbinger4_TP chr8 ensembl protein_coding_gene 728463 733911 . - . ID=Thaps12259;biotype=protein_coding;description=Helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C728];external_name=Thaps12259;logic_name=jgi_thaps3 chr8 ensembl transcript 728463 733911 . - . ID=Thaps12259;Parent=Thaps12259;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 728463 728773 . - 0 ID=Thaps12259;Parent=Thaps12259;rank=9 chr8 . exon 728463 728773 . - . ID=Thaps12259.9;Parent=Thaps12259;constitutive=1;ensembl_end_phase=2;rank=9 chr8 . CDS 728927 730477 . - 0 ID=Thaps12259;Parent=Thaps12259;rank=8 chr8 . exon 728927 730477 . - . ID=Thaps12259.8;Parent=Thaps12259;constitutive=1;rank=8 chr8 . CDS 730564 731510 . - 0 ID=Thaps12259;Parent=Thaps12259;rank=7 chr8 . exon 730564 731510 . - . ID=Thaps12259.7;Parent=Thaps12259;constitutive=1;ensembl_end_phase=2;rank=7 chr8 . CDS 731594 731776 . - 0 ID=Thaps12259;Parent=Thaps12259;rank=6 chr8 . exon 731594 731776 . - . ID=Thaps12259.6;Parent=Thaps12259;constitutive=1;rank=6 chr8 . CDS 731850 732384 . - 0 ID=Thaps12259;Parent=Thaps12259;rank=5 chr8 . exon 731850 732384 . - . ID=Thaps12259.5;Parent=Thaps12259;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 732460 733137 . - 0 ID=Thaps12259;Parent=Thaps12259;rank=4 chr8 . exon 732460 733137 . - . ID=Thaps12259.4;Parent=Thaps12259;constitutive=1;rank=4 chr8 . CDS 733217 733250 . - 0 ID=Thaps12259;Parent=Thaps12259;rank=3 chr8 . exon 733217 733250 . - . ID=Thaps12259.3;Parent=Thaps12259;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 733327 733589 . - 0 ID=Thaps12259;Parent=Thaps12259;rank=2 chr8 . exon 733327 733589 . - . ID=Thaps12259.2;Parent=Thaps12259;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 733671 733911 . - 0 ID=Thaps12259;Parent=Thaps12259;rank=1 chr8 . exon 733671 733911 . - . ID=Thaps12259.1;Parent=Thaps12259;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 735885 736370 . - . ID=Thaps7632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C729];external_name=Thaps7632;logic_name=jgi_thaps3 chr8 ensembl transcript 735885 736370 . - . ID=Thaps7632;Parent=Thaps7632;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 735885 736370 . - 0 ID=Thaps7632;Parent=Thaps7632;rank=1 chr8 . exon 735885 736370 . - . ID=Thaps7632.1;Parent=Thaps7632;constitutive=1;rank=1 chr8 . repeat_region 738366 738444 . ? . description=trf chr8 . repeat_region 738790 738832 . ? . description=trf chr8 . repeat_region 739655 739848 . + . description=Gypsy1ALTR_TP chr8 . repeat_region 746460 746497 . ? . description=trf chr8 ensembl protein_coding_gene 744563 746306 . - . ID=Thaps23786;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C731];external_name=Thaps23786;logic_name=jgi_thaps3 chr8 ensembl transcript 744563 746306 . - . ID=Thaps23786;Parent=Thaps23786;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 744563 744771 . - 0 ID=Thaps23786;Parent=Thaps23786;rank=3 chr8 . exon 744563 744771 . - . ID=Thaps23786.3;Parent=Thaps23786;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 744861 745704 . - 0 ID=Thaps23786;Parent=Thaps23786;rank=2 chr8 . exon 744861 745704 . - . ID=Thaps23786.2;Parent=Thaps23786;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 745788 746306 . - 0 ID=Thaps23786;Parent=Thaps23786;rank=1 chr8 . exon 745788 746306 . - . ID=Thaps23786.1;Parent=Thaps23786;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 746999 748711 . + . ID=Thaps29183;biotype=protein_coding;description=2-isopropylmalate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C732];external_name=Thaps29183;logic_name=jgi_thaps3 chr8 ensembl transcript 746999 748711 . + . ID=Thaps29183;Parent=Thaps29183;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 746999 748711 . + 0 ID=Thaps29183;Parent=Thaps29183;rank=1 chr8 . exon 746999 748711 . + . ID=Thaps29183.1;Parent=Thaps29183;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 740227 744397 . + . ID=Thaps7633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C730];external_name=Thaps7633;logic_name=jgi_thaps3 chr8 ensembl transcript 740227 744397 . + . ID=Thaps7633;Parent=Thaps7633;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 740227 740309 . + 0 ID=Thaps7633;Parent=Thaps7633;rank=1 chr8 . exon 740227 740309 . + . ID=Thaps7633.1;Parent=Thaps7633;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 740331 742399 . + 0 ID=Thaps7633;Parent=Thaps7633;rank=2 chr8 . exon 740331 742399 . + . ID=Thaps7633.2;Parent=Thaps7633;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 742484 742578 . + 0 ID=Thaps7633;Parent=Thaps7633;rank=3 chr8 . exon 742484 742578 . + . ID=Thaps7633.3;Parent=Thaps7633;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 742652 743666 . + 0 ID=Thaps7633;Parent=Thaps7633;rank=4 chr8 . exon 742652 743666 . + . ID=Thaps7633.4;Parent=Thaps7633;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 743790 744397 . + 0 ID=Thaps7633;Parent=Thaps7633;rank=5 chr8 . exon 743790 744397 . + . ID=Thaps7633.5;Parent=Thaps7633;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . repeat_region 749218 749226 . ? . description=dust chr8 ensembl protein_coding_gene 748894 750945 . - . ID=Thaps23788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C733];external_name=Thaps23788;logic_name=jgi_thaps3 chr8 ensembl transcript 748894 750945 . - . ID=Thaps23788;Parent=Thaps23788;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 748894 750945 . - 0 ID=Thaps23788;Parent=Thaps23788;rank=1 chr8 . exon 748894 750945 . - . ID=Thaps23788.1;Parent=Thaps23788;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 753393 754147 . + . ID=Thaps263409;biotype=protein_coding;description=Salicylate biosynthesis isochorismate synthase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C734];external_name=Thaps263409;logic_name=jgi_thaps3 chr8 ensembl transcript 753393 754147 . + . ID=Thaps263409;Parent=Thaps263409;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 753393 753452 . + 0 ID=Thaps263409;Parent=Thaps263409;rank=1 chr8 . exon 753393 753452 . + . ID=Thaps263409.1;Parent=Thaps263409;constitutive=1;rank=1 chr8 . CDS 753553 753704 . + 0 ID=Thaps263409;Parent=Thaps263409;rank=2 chr8 . exon 753553 753704 . + . ID=Thaps263409.2;Parent=Thaps263409;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 753783 753865 . + 0 ID=Thaps263409;Parent=Thaps263409;rank=3 chr8 . exon 753783 753865 . + . ID=Thaps263409.3;Parent=Thaps263409;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 753952 754147 . + 0 ID=Thaps263409;Parent=Thaps263409;rank=4 chr8 . exon 753952 754147 . + . ID=Thaps263409.4;Parent=Thaps263409;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . repeat_region 758354 758383 . ? . description=trf chr8 . repeat_region 760910 760974 . - . description=TE2c_TP chr8 . repeat_region 760966 761097 . + . description=Copia6I_TP chr8 . repeat_region 761116 761256 . + . description=Copia6I_TP chr8 . repeat_region 762843 762933 . ? . description=trf chr8 . repeat_region 762845 762939 . ? . description=trf chr8 . repeat_region 762846 762939 . ? . description=trf chr8 ensembl protein_coding_gene 759197 759562 . + . ID=Thaps19526;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C735];external_name=Thaps19526;logic_name=jgi_thaps3 chr8 ensembl transcript 759197 759562 . + . ID=Thaps19526;Parent=Thaps19526;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 759197 759562 . + 0 ID=Thaps19526;Parent=Thaps19526;rank=1 chr8 . exon 759197 759562 . + . ID=Thaps19526.1;Parent=Thaps19526;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 768278 768475 . - . ID=Thaps20016;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C739];external_name=Thaps20016;logic_name=jgi_thaps3 chr8 ensembl transcript 768278 768475 . - . ID=Thaps20016;Parent=Thaps20016;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 768278 768475 . - 0 ID=Thaps20016;Parent=Thaps20016;rank=1 chr8 . exon 768278 768475 . - . ID=Thaps20016.1;Parent=Thaps20016;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 765630 767366 . - . ID=Thaps23791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C738];external_name=Thaps23791;logic_name=jgi_thaps3 chr8 ensembl transcript 765630 767366 . - . ID=Thaps23791;Parent=Thaps23791;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 765630 767366 . - 0 ID=Thaps23791;Parent=Thaps23791;rank=1 chr8 . exon 765630 767366 . - . ID=Thaps23791.1;Parent=Thaps23791;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 764247 765563 . + . ID=Thaps41583;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C737];external_name=Thaps41583;logic_name=jgi_thaps3 chr8 ensembl transcript 764247 765563 . + . ID=Thaps41583;Parent=Thaps41583;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 764247 764451 . + 0 ID=Thaps41583;Parent=Thaps41583;rank=1 chr8 . exon 764247 764451 . + . ID=Thaps41583.1;Parent=Thaps41583;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 764572 764776 . + 0 ID=Thaps41583;Parent=Thaps41583;rank=2 chr8 . exon 764572 764776 . + . ID=Thaps41583.2;Parent=Thaps41583;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 764865 765085 . + 0 ID=Thaps41583;Parent=Thaps41583;rank=3 chr8 . exon 764865 765085 . + . ID=Thaps41583.3;Parent=Thaps41583;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 765181 765563 . + 0 ID=Thaps41583;Parent=Thaps41583;rank=4 chr8 . exon 765181 765563 . + . ID=Thaps41583.4;Parent=Thaps41583;constitutive=1;ensembl_end_phase=2;rank=4 chr8 ensembl protein_coding_gene 762101 763880 . + . ID=Thaps7638;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C736];external_name=Thaps7638;logic_name=jgi_thaps3 chr8 ensembl transcript 762101 763880 . + . ID=Thaps7638;Parent=Thaps7638;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 762101 762317 . + 0 ID=Thaps7638;Parent=Thaps7638;rank=1 chr8 . exon 762101 762317 . + . ID=Thaps7638.1;Parent=Thaps7638;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 762443 762504 . + 0 ID=Thaps7638;Parent=Thaps7638;rank=2 chr8 . exon 762443 762504 . + . ID=Thaps7638.2;Parent=Thaps7638;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 762614 763058 . + 0 ID=Thaps7638;Parent=Thaps7638;rank=3 chr8 . exon 762614 763058 . + . ID=Thaps7638.3;Parent=Thaps7638;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 763142 763238 . + 0 ID=Thaps7638;Parent=Thaps7638;rank=4 chr8 . exon 763142 763238 . + . ID=Thaps7638.4;Parent=Thaps7638;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 763335 763366 . + 0 ID=Thaps7638;Parent=Thaps7638;rank=5 chr8 . exon 763335 763366 . + . ID=Thaps7638.5;Parent=Thaps7638;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . CDS 763496 763577 . + 0 ID=Thaps7638;Parent=Thaps7638;rank=6 chr8 . exon 763496 763577 . + . ID=Thaps7638.6;Parent=Thaps7638;constitutive=1;ensembl_end_phase=1;rank=6 chr8 . CDS 763676 763880 . + 0 ID=Thaps7638;Parent=Thaps7638;rank=7 chr8 . exon 763676 763880 . + . ID=Thaps7638.7;Parent=Thaps7638;constitutive=1;ensembl_end_phase=1;rank=7 chr8 ensembl protein_coding_gene 770257 771789 . - . ID=Thaps14643;biotype=protein_coding;description=Beta-1%2C4 mannosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C741];external_name=Thaps14643;logic_name=jgi_thaps3 chr8 ensembl transcript 770257 771789 . - . ID=Thaps14643;Parent=Thaps14643;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 770257 770934 . - 0 ID=Thaps14643;Parent=Thaps14643;rank=3 chr8 . exon 770257 770934 . - . ID=Thaps14643.3;Parent=Thaps14643;constitutive=1;rank=3 chr8 . CDS 771058 771424 . - 0 ID=Thaps14643;Parent=Thaps14643;rank=2 chr8 . exon 771058 771424 . - . ID=Thaps14643.2;Parent=Thaps14643;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 771482 771789 . - 0 ID=Thaps14643;Parent=Thaps14643;rank=1 chr8 . exon 771482 771789 . - . ID=Thaps14643.1;Parent=Thaps14643;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 775060 776172 . + . ID=Thaps23792;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C744];external_name=Thaps23792;logic_name=jgi_thaps3 chr8 ensembl transcript 775060 776172 . + . ID=Thaps23792;Parent=Thaps23792;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 775060 776172 . + 0 ID=Thaps23792;Parent=Thaps23792;rank=1 chr8 . exon 775060 776172 . + . ID=Thaps23792.1;Parent=Thaps23792;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 769184 770215 . + . ID=Thaps7641;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C740];external_name=Thaps7641;logic_name=jgi_thaps3 chr8 ensembl transcript 769184 770215 . + . ID=Thaps7641;Parent=Thaps7641;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 769184 770215 . + 0 ID=Thaps7641;Parent=Thaps7641;rank=1 chr8 . exon 769184 770215 . + . ID=Thaps7641.1;Parent=Thaps7641;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 772600 773538 . + . ID=Thaps7642;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C742];external_name=Thaps7642;logic_name=jgi_thaps3 chr8 ensembl transcript 772600 773538 . + . ID=Thaps7642;Parent=Thaps7642;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 772600 773538 . + 0 ID=Thaps7642;Parent=Thaps7642;rank=1 chr8 . exon 772600 773538 . + . ID=Thaps7642.1;Parent=Thaps7642;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 773687 774658 . - . ID=Thaps7643;biotype=protein_coding;description=Probable naphthoate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C743];external_name=NPS1;logic_name=jgi_thaps3 chr8 ensembl transcript 773687 774658 . - . ID=Thaps7643;Parent=Thaps7643;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 773687 774658 . - 0 ID=Thaps7643;Parent=Thaps7643;rank=1 chr8 . exon 773687 774658 . - . ID=Thaps7643.1;Parent=Thaps7643;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 776267 778045 . - . ID=Thaps7645;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C745];external_name=Thaps7645;logic_name=jgi_thaps3 chr8 ensembl transcript 776267 778045 . - . ID=Thaps7645;Parent=Thaps7645;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 776267 777759 . - 0 ID=Thaps7645;Parent=Thaps7645;rank=2 chr8 . exon 776267 777759 . - . ID=Thaps7645.2;Parent=Thaps7645;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 777967 778045 . - 0 ID=Thaps7645;Parent=Thaps7645;rank=1 chr8 . exon 777967 778045 . - . ID=Thaps7645.1;Parent=Thaps7645;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 787337 789323 . - . ID=Thaps263415;biotype=protein_coding;description=Replication protein a [Source:UniProtKB/TrEMBL%3BAcc:B8C750];external_name=Thaps263415;logic_name=jgi_thaps3 chr8 ensembl transcript 787337 789323 . - . ID=Thaps263415;Parent=Thaps263415;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 787337 788691 . - 0 ID=Thaps263415;Parent=Thaps263415;rank=4 chr8 . exon 787337 788691 . - . ID=Thaps263415.4;Parent=Thaps263415;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 788818 788863 . - 0 ID=Thaps263415;Parent=Thaps263415;rank=3 chr8 . CDS 788888 789133 . - 0 ID=Thaps263415;Parent=Thaps263415;rank=2 chr8 . CDS 789261 789323 . - 0 ID=Thaps263415;Parent=Thaps263415;rank=1 chr8 ensembl protein_coding_gene 779956 780974 . + . ID=Thaps35810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C746];external_name=Thaps35810;logic_name=jgi_thaps3 chr8 ensembl transcript 779956 780974 . + . ID=Thaps35810;Parent=Thaps35810;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 779956 780265 . + 0 ID=Thaps35810;Parent=Thaps35810;rank=1 chr8 . exon 779956 780265 . + . ID=Thaps35810.1;Parent=Thaps35810;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 780388 780974 . + 0 ID=Thaps35810;Parent=Thaps35810;rank=2 chr8 . exon 780388 780974 . + . ID=Thaps35810.2;Parent=Thaps35810;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 781747 782472 . + . ID=Thaps7647;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C747];external_name=MYB24;logic_name=jgi_thaps3 chr8 ensembl transcript 781747 782472 . + . ID=Thaps7647;Parent=Thaps7647;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 781747 782472 . + 0 ID=Thaps7647;Parent=Thaps7647;rank=1 chr8 . exon 781747 782472 . + . ID=Thaps7647.1;Parent=Thaps7647;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 782759 784334 . - . ID=Thaps7648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C748];external_name=Thaps7648;logic_name=jgi_thaps3 chr8 ensembl transcript 782759 784334 . - . ID=Thaps7648;Parent=Thaps7648;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 782759 783017 . - 0 ID=Thaps7648;Parent=Thaps7648;rank=3 chr8 . exon 782759 783017 . - . ID=Thaps7648.3;Parent=Thaps7648;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 783106 783660 . - 0 ID=Thaps7648;Parent=Thaps7648;rank=2 chr8 . exon 783106 783660 . - . ID=Thaps7648.2;Parent=Thaps7648;constitutive=1;rank=2 chr8 . CDS 783754 784334 . - 0 ID=Thaps7648;Parent=Thaps7648;rank=1 chr8 . exon 783754 784334 . - . ID=Thaps7648.1;Parent=Thaps7648;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 784590 787111 . + . ID=Thaps7649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C749];external_name=Thaps7649;logic_name=jgi_thaps3 chr8 ensembl transcript 784590 787111 . + . ID=Thaps7649;Parent=Thaps7649;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 784590 785383 . + 0 ID=Thaps7649;Parent=Thaps7649;rank=1 chr8 . exon 784590 785383 . + . ID=Thaps7649.1;Parent=Thaps7649;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 785467 787111 . + 0 ID=Thaps7649;Parent=Thaps7649;rank=2 chr8 . exon 785467 787111 . + . ID=Thaps7649.2;Parent=Thaps7649;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . repeat_region 790470 790496 . ? . description=trf chr8 ensembl protein_coding_gene 790204 791100 . + . ID=Thaps23794;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C751];external_name=Thaps23794;logic_name=jgi_thaps3 chr8 ensembl transcript 790204 791100 . + . ID=Thaps23794;Parent=Thaps23794;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 790204 791100 . + 0 ID=Thaps23794;Parent=Thaps23794;rank=1 chr8 . exon 790204 791100 . + . ID=Thaps23794.1;Parent=Thaps23794;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 793059 795978 . + . ID=Thaps23795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C753];external_name=Thaps23795;logic_name=jgi_thaps3 chr8 ensembl transcript 793059 795978 . + . ID=Thaps23795;Parent=Thaps23795;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 793059 794778 . + 0 ID=Thaps23795;Parent=Thaps23795;rank=1 chr8 . exon 793059 794778 . + . ID=Thaps23795.1;Parent=Thaps23795;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 794869 795677 . + 0 ID=Thaps23795;Parent=Thaps23795;rank=2 chr8 . exon 794869 795677 . + . ID=Thaps23795.2;Parent=Thaps23795;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 795760 795978 . + 0 ID=Thaps23795;Parent=Thaps23795;rank=3 chr8 . exon 795760 795978 . + . ID=Thaps23795.3;Parent=Thaps23795;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 796285 797973 . + . ID=Thaps23796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C754];external_name=Thaps23796;logic_name=jgi_thaps3 chr8 ensembl transcript 796285 797973 . + . ID=Thaps23796;Parent=Thaps23796;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 796285 797973 . + 0 ID=Thaps23796;Parent=Thaps23796;rank=1 chr8 . exon 796285 797973 . + . ID=Thaps23796.1;Parent=Thaps23796;constitutive=1;rank=1 chr8 . exon 788818 788863 . - . ID=Thaps263415.3;Parent=Thaps263415;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . exon 788888 789133 . - . ID=Thaps263415.2;Parent=Thaps263415;constitutive=1;rank=2 chr8 . exon 789261 789323 . - . ID=Thaps263415.1;Parent=Thaps263415;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 791824 792656 . - . ID=Thaps7652;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C752];external_name=Thaps7652;logic_name=jgi_thaps3 chr8 ensembl transcript 791824 792656 . - . ID=Thaps7652;Parent=Thaps7652;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 791824 792264 . - 0 ID=Thaps7652;Parent=Thaps7652;rank=2 chr8 . exon 791824 792264 . - . ID=Thaps7652.2;Parent=Thaps7652;constitutive=1;rank=2 chr8 . CDS 792384 792656 . - 0 ID=Thaps7652;Parent=Thaps7652;rank=1 chr8 . exon 792384 792656 . - . ID=Thaps7652.1;Parent=Thaps7652;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 798238 798996 . - . ID=Thaps7655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C755];external_name=Thaps7655;logic_name=jgi_thaps3 chr8 ensembl transcript 798238 798996 . - . ID=Thaps7655;Parent=Thaps7655;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 798238 798996 . - 0 ID=Thaps7655;Parent=Thaps7655;rank=1 chr8 . exon 798238 798996 . - . ID=Thaps7655.1;Parent=Thaps7655;constitutive=1;rank=1 chr8 . repeat_region 803219 803269 . ? . description=dust chr8 . repeat_region 804205 804212 . ? . description=dust chr8 ensembl protein_coding_gene 801289 802593 . - . ID=Thaps23798;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C757];external_name=Thaps23798;logic_name=jgi_thaps3 chr8 ensembl transcript 801289 802593 . - . ID=Thaps23798;Parent=Thaps23798;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 801289 802593 . - 0 ID=Thaps23798;Parent=Thaps23798;rank=1 chr8 . exon 801289 802593 . - . ID=Thaps23798.1;Parent=Thaps23798;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 802938 804147 . + . ID=Thaps23800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C758];external_name=Thaps23800;logic_name=jgi_thaps3 chr8 ensembl transcript 802938 804147 . + . ID=Thaps23800;Parent=Thaps23800;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 802938 803218 . + 0 ID=Thaps23800;Parent=Thaps23800;rank=1 chr8 . exon 802938 803218 . + . ID=Thaps23800.1;Parent=Thaps23800;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 803677 803810 . + 0 ID=Thaps23800;Parent=Thaps23800;rank=2 chr8 . exon 803677 803810 . + . ID=Thaps23800.2;Parent=Thaps23800;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 803939 804147 . + 0 ID=Thaps23800;Parent=Thaps23800;rank=3 chr8 . exon 803939 804147 . + . ID=Thaps23800.3;Parent=Thaps23800;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 805277 806871 . + . ID=Thaps23801;biotype=protein_coding;description=Putative uncharacterized protein HSF27 [Source:UniProtKB/TrEMBL%3BAcc:B8C759];external_name=HSF27;logic_name=jgi_thaps3 chr8 ensembl transcript 805277 806871 . + . ID=Thaps23801;Parent=Thaps23801;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 805277 805761 . + 0 ID=Thaps23801;Parent=Thaps23801;rank=1 chr8 . exon 805277 805761 . + . ID=Thaps23801.1;Parent=Thaps23801;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 805845 806871 . + 0 ID=Thaps23801;Parent=Thaps23801;rank=2 chr8 . exon 805845 806871 . + . ID=Thaps23801.2;Parent=Thaps23801;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 807531 809284 . + . ID=Thaps23802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C760];external_name=Thaps23802;logic_name=jgi_thaps3 chr8 ensembl transcript 807531 809284 . + . ID=Thaps23802;Parent=Thaps23802;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 807531 808141 . + 0 ID=Thaps23802;Parent=Thaps23802;rank=1 chr8 . exon 807531 808141 . + . ID=Thaps23802.1;Parent=Thaps23802;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 808266 808502 . + 0 ID=Thaps23802;Parent=Thaps23802;rank=2 chr8 . CDS 808624 809284 . + 0 ID=Thaps23802;Parent=Thaps23802;rank=3 chr8 ensembl protein_coding_gene 799369 801162 . + . ID=Thaps7656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C756];external_name=Thaps7656;logic_name=jgi_thaps3 chr8 ensembl transcript 799369 801162 . + . ID=Thaps7656;Parent=Thaps7656;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 799369 801162 . + 0 ID=Thaps7656;Parent=Thaps7656;rank=1 chr8 . exon 799369 801162 . + . ID=Thaps7656.1;Parent=Thaps7656;constitutive=1;rank=1 chr8 . repeat_region 810276 810317 . ? . description=trf chr8 . exon 808266 808502 . + . ID=Thaps23802.2;Parent=Thaps23802;constitutive=1;rank=2 chr8 . exon 808624 809284 . + . ID=Thaps23802.3;Parent=Thaps23802;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 809769 811553 . - . ID=Thaps23803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C761];external_name=Thaps23803;logic_name=jgi_thaps3 chr8 ensembl transcript 809769 811553 . - . ID=Thaps23803;Parent=Thaps23803;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 809769 810001 . - 0 ID=Thaps23803;Parent=Thaps23803;rank=7 chr8 . exon 809769 810001 . - . ID=Thaps23803.7;Parent=Thaps23803;constitutive=1;ensembl_end_phase=2;rank=7 chr8 . CDS 810094 810165 . - 0 ID=Thaps23803;Parent=Thaps23803;rank=6 chr8 . exon 810094 810165 . - . ID=Thaps23803.6;Parent=Thaps23803;constitutive=1;rank=6 chr8 . CDS 810245 810316 . - 0 ID=Thaps23803;Parent=Thaps23803;rank=5 chr8 . exon 810245 810316 . - . ID=Thaps23803.5;Parent=Thaps23803;constitutive=1;rank=5 chr8 . CDS 810401 810679 . - 0 ID=Thaps23803;Parent=Thaps23803;rank=4 chr8 . exon 810401 810679 . - . ID=Thaps23803.4;Parent=Thaps23803;constitutive=1;rank=4 chr8 . CDS 810784 810871 . - 0 ID=Thaps23803;Parent=Thaps23803;rank=3 chr8 . exon 810784 810871 . - . ID=Thaps23803.3;Parent=Thaps23803;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 810998 811173 . - 0 ID=Thaps23803;Parent=Thaps23803;rank=2 chr8 . exon 810998 811173 . - . ID=Thaps23803.2;Parent=Thaps23803;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 811325 811553 . - 0 ID=Thaps23803;Parent=Thaps23803;rank=1 chr8 . exon 811325 811553 . - . ID=Thaps23803.1;Parent=Thaps23803;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 815423 815638 . + . ID=Thaps35984;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C762];external_name=Thaps35984;logic_name=jgi_thaps3 chr8 ensembl transcript 815423 815638 . + . ID=Thaps35984;Parent=Thaps35984;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 815423 815638 . + 0 ID=Thaps35984;Parent=Thaps35984;rank=1 chr8 . exon 815423 815638 . + . ID=Thaps35984.1;Parent=Thaps35984;constitutive=1;rank=1 chr8 . repeat_region 818589 818596 . ? . description=dust chr8 . repeat_region 823564 823598 . ? . description=dust chr8 . repeat_region 824288 824336 . ? . description=dust chr8 . repeat_region 824621 824629 . ? . description=dust chr8 ensembl protein_coding_gene 818964 820052 . - . ID=Thaps23804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C763];external_name=Thaps23804;logic_name=jgi_thaps3 chr8 ensembl transcript 818964 820052 . - . ID=Thaps23804;Parent=Thaps23804;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 818964 820052 . - 0 ID=Thaps23804;Parent=Thaps23804;rank=1 chr8 . exon 818964 820052 . - . ID=Thaps23804.1;Parent=Thaps23804;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 822897 824550 . - . ID=Thaps23806;biotype=protein_coding;description=Udp-galactose transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C766];external_name=Thaps23806;logic_name=jgi_thaps3 chr8 ensembl transcript 822897 824550 . - . ID=Thaps23806;Parent=Thaps23806;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 822897 823130 . - 0 ID=Thaps23806;Parent=Thaps23806;rank=4 chr8 . exon 822897 823130 . - . ID=Thaps23806.4;Parent=Thaps23806;constitutive=1;rank=4 chr8 . CDS 823212 823940 . - 0 ID=Thaps23806;Parent=Thaps23806;rank=3 chr8 . exon 823212 823940 . - . ID=Thaps23806.3;Parent=Thaps23806;constitutive=1;rank=3 chr8 . CDS 824047 824362 . - 0 ID=Thaps23806;Parent=Thaps23806;rank=2 chr8 . exon 824047 824362 . - . ID=Thaps23806.2;Parent=Thaps23806;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 824534 824550 . - 0 ID=Thaps23806;Parent=Thaps23806;rank=1 chr8 . exon 824534 824550 . - . ID=Thaps23806.1;Parent=Thaps23806;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 820345 820950 . + . ID=Thaps35808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C764];external_name=Thaps35808;logic_name=jgi_thaps3 chr8 ensembl transcript 820345 820950 . + . ID=Thaps35808;Parent=Thaps35808;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 820345 820950 . + 0 ID=Thaps35808;Parent=Thaps35808;rank=1 chr8 . exon 820345 820950 . + . ID=Thaps35808.1;Parent=Thaps35808;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 822033 822566 . + . ID=Thaps7667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C765];external_name=Thaps7667;logic_name=jgi_thaps3 chr8 ensembl transcript 822033 822566 . + . ID=Thaps7667;Parent=Thaps7667;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 822033 822566 . + 0 ID=Thaps7667;Parent=Thaps7667;rank=1 chr8 . exon 822033 822566 . + . ID=Thaps7667.1;Parent=Thaps7667;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 825632 826597 . - . ID=Thaps7669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C767];external_name=Thaps7669;logic_name=jgi_thaps3 chr8 ensembl transcript 825632 826597 . - . ID=Thaps7669;Parent=Thaps7669;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 825632 826597 . - 0 ID=Thaps7669;Parent=Thaps7669;rank=1 chr8 . exon 825632 826597 . - . ID=Thaps7669.1;Parent=Thaps7669;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 828711 830815 . - . ID=Thaps263422;biotype=protein_coding;description=Luminal binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8C768];external_name=BIP3;logic_name=jgi_thaps3 chr8 ensembl transcript 828711 830815 . - . ID=Thaps263422;Parent=Thaps263422;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 828711 829353 . - 0 ID=Thaps263422;Parent=Thaps263422;rank=3 chr8 . exon 828711 829353 . - . ID=Thaps263422.3;Parent=Thaps263422;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 829438 829635 . - 0 ID=Thaps263422;Parent=Thaps263422;rank=2 chr8 . exon 829438 829635 . - . ID=Thaps263422.2;Parent=Thaps263422;constitutive=1;rank=2 chr8 . CDS 829730 830815 . - 0 ID=Thaps263422;Parent=Thaps263422;rank=1 chr8 . exon 829730 830815 . - . ID=Thaps263422.1;Parent=Thaps263422;constitutive=1;rank=1 chr8 ensembl gene 836784 838271 . - . ID=Thaps263424;biotype=nontranslating_CDS;description=Aspartokinase [Source:UniProtKB/TrEMBL%3BAcc:B8C772];external_name=Thaps24712;logic_name=jgi_thaps3 chr8 ensembl transcript 836784 838271 . - . ID=Thaps263424;Parent=Thaps263424;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr8 . exon 836784 837542 . - . ID=Thaps263424.4;Parent=Thaps263424;constitutive=1;rank=4 chr8 . exon 837610 837624 . - . ID=Thaps263424.3;Parent=Thaps263424;constitutive=1;rank=3 chr8 . exon 837664 838165 . - . ID=Thaps263424.2;Parent=Thaps263424;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 836049 836606 . + . ID=Thaps35871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C771];external_name=Thaps35871;logic_name=jgi_thaps3 chr8 ensembl transcript 836049 836606 . + . ID=Thaps35871;Parent=Thaps35871;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 836049 836606 . + 0 ID=Thaps35871;Parent=Thaps35871;rank=1 chr8 . exon 836049 836606 . + . ID=Thaps35871.1;Parent=Thaps35871;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 833567 833959 . - . ID=Thaps36081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C770];external_name=Thaps36081;logic_name=jgi_thaps3 chr8 ensembl transcript 833567 833959 . - . ID=Thaps36081;Parent=Thaps36081;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 833567 833959 . - 0 ID=Thaps36081;Parent=Thaps36081;rank=1 chr8 . exon 833567 833959 . - . ID=Thaps36081.1;Parent=Thaps36081;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 832214 832933 . + . ID=Thaps7672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C769];external_name=Thaps7672;logic_name=jgi_thaps3 chr8 ensembl transcript 832214 832933 . + . ID=Thaps7672;Parent=Thaps7672;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 832214 832933 . + 0 ID=Thaps7672;Parent=Thaps7672;rank=1 chr8 . exon 832214 832933 . + . ID=Thaps7672.1;Parent=Thaps7672;constitutive=1;rank=1 chr8 . repeat_region 844309 844319 . ? . description=dust chr8 . repeat_region 847290 847319 . ? . description=trf chr8 . exon 838190 838271 . - . ID=Thaps263424.1;Parent=Thaps263424;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 838880 839682 . + . ID=Thaps263425;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C773];external_name=Thaps263425;logic_name=jgi_thaps3 chr8 ensembl transcript 838880 839682 . + . ID=Thaps263425;Parent=Thaps263425;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 838880 839066 . + 0 ID=Thaps263425;Parent=Thaps263425;rank=1 chr8 . exon 838880 839066 . + . ID=Thaps263425.1;Parent=Thaps263425;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 839103 839682 . + 0 ID=Thaps263425;Parent=Thaps263425;rank=2 chr8 . exon 839103 839682 . + . ID=Thaps263425.2;Parent=Thaps263425;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 841243 842321 . - . ID=Thaps263427;biotype=protein_coding;external_name=Thaps263427;logic_name=jgi_thaps3 chr8 ensembl transcript 841243 842321 . - . ID=Thaps263427;Parent=Thaps263427;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 841243 841382 . - 0 ID=Thaps263427;Parent=Thaps263427;rank=2 chr8 . exon 841243 841382 . - . ID=Thaps263427.2;Parent=Thaps263427;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 841521 842321 . - 0 ID=Thaps263427;Parent=Thaps263427;rank=1 chr8 . exon 841521 842321 . - . ID=Thaps263427.1;Parent=Thaps263427;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 846527 847656 . + . ID=Thaps263428;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C778];external_name=Thaps263428;logic_name=jgi_thaps3 chr8 ensembl transcript 846527 847656 . + . ID=Thaps263428;Parent=Thaps263428;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 846527 846730 . + 0 ID=Thaps263428;Parent=Thaps263428;rank=1 chr8 . exon 846527 846730 . + . ID=Thaps263428.1;Parent=Thaps263428;constitutive=1;rank=1 chr8 . CDS 846779 846972 . + 0 ID=Thaps263428;Parent=Thaps263428;rank=2 chr8 . exon 846779 846972 . + . ID=Thaps263428.2;Parent=Thaps263428;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 847135 847254 . + 0 ID=Thaps263428;Parent=Thaps263428;rank=3 chr8 . exon 847135 847254 . + . ID=Thaps263428.3;Parent=Thaps263428;constitutive=1;rank=3 chr8 . CDS 847347 847656 . + 0 ID=Thaps263428;Parent=Thaps263428;rank=4 chr8 . exon 847347 847656 . + . ID=Thaps263428.4;Parent=Thaps263428;constitutive=1;ensembl_end_phase=1;rank=4 chr8 ensembl protein_coding_gene 839827 840865 . - . ID=Thaps7676;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C774];external_name=Thaps7676;logic_name=jgi_thaps3 chr8 ensembl transcript 839827 840865 . - . ID=Thaps7676;Parent=Thaps7676;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 839827 840248 . - 0 ID=Thaps7676;Parent=Thaps7676;rank=2 chr8 . exon 839827 840248 . - . ID=Thaps7676.2;Parent=Thaps7676;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 840337 840865 . - 0 ID=Thaps7676;Parent=Thaps7676;rank=1 chr8 . exon 840337 840865 . - . ID=Thaps7676.1;Parent=Thaps7676;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 843166 844071 . - . ID=Thaps7678;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C776];external_name=Thaps7678;logic_name=jgi_thaps3 chr8 ensembl transcript 843166 844071 . - . ID=Thaps7678;Parent=Thaps7678;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 843166 844071 . - 0 ID=Thaps7678;Parent=Thaps7678;rank=1 chr8 . exon 843166 844071 . - . ID=Thaps7678.1;Parent=Thaps7678;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 844425 845394 . + . ID=Thaps7679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C777];external_name=Thaps7679;logic_name=jgi_thaps3 chr8 ensembl transcript 844425 845394 . + . ID=Thaps7679;Parent=Thaps7679;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 844425 845048 . + 0 ID=Thaps7679;Parent=Thaps7679;rank=1 chr8 . exon 844425 845048 . + . ID=Thaps7679.1;Parent=Thaps7679;constitutive=1;rank=1 chr8 . CDS 845161 845394 . + 0 ID=Thaps7679;Parent=Thaps7679;rank=2 chr8 . exon 845161 845394 . + . ID=Thaps7679.2;Parent=Thaps7679;constitutive=1;rank=2 chr8 . repeat_region 852909 852999 . + . description=Harbinger2N_TP chr8 ensembl protein_coding_gene 848811 851865 . - . ID=Thaps23810;biotype=protein_coding;description=Phosphoenol pyruvate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C779];external_name=PPS1;logic_name=jgi_thaps3 chr8 ensembl transcript 848811 851865 . - . ID=Thaps23810;Parent=Thaps23810;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 848811 849117 . - 0 ID=Thaps23810;Parent=Thaps23810;rank=7 chr8 . exon 848811 849117 . - . ID=Thaps23810.7;Parent=Thaps23810;constitutive=1;ensembl_end_phase=1;rank=7 chr8 . CDS 849196 849239 . - 0 ID=Thaps23810;Parent=Thaps23810;rank=6 chr8 . exon 849196 849239 . - . ID=Thaps23810.6;Parent=Thaps23810;constitutive=1;ensembl_end_phase=2;rank=6 chr8 . CDS 849361 850024 . - 0 ID=Thaps23810;Parent=Thaps23810;rank=5 chr8 . exon 849361 850024 . - . ID=Thaps23810.5;Parent=Thaps23810;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 850079 850252 . - 0 ID=Thaps23810;Parent=Thaps23810;rank=4 chr8 . exon 850079 850252 . - . ID=Thaps23810.4;Parent=Thaps23810;constitutive=1;rank=4 chr8 . CDS 850331 850667 . - 0 ID=Thaps23810;Parent=Thaps23810;rank=3 chr8 . exon 850331 850667 . - . ID=Thaps23810.3;Parent=Thaps23810;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 850753 851579 . - 0 ID=Thaps23810;Parent=Thaps23810;rank=2 chr8 . exon 850753 851579 . - . ID=Thaps23810.2;Parent=Thaps23810;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 851651 851865 . - 0 ID=Thaps23810;Parent=Thaps23810;rank=1 chr8 . exon 851651 851865 . - . ID=Thaps23810.1;Parent=Thaps23810;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 853813 854850 . + . ID=Thaps23811;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C780];external_name=Thaps23811;logic_name=jgi_thaps3 chr8 ensembl transcript 853813 854850 . + . ID=Thaps23811;Parent=Thaps23811;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 853813 854850 . + 0 ID=Thaps23811;Parent=Thaps23811;rank=1 chr8 . exon 853813 854850 . + . ID=Thaps23811.1;Parent=Thaps23811;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 855043 857478 . - . ID=Thaps7683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C781];external_name=Thaps7683;logic_name=jgi_thaps3 chr8 ensembl transcript 855043 857478 . - . ID=Thaps7683;Parent=Thaps7683;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 855043 857478 . - 0 ID=Thaps7683;Parent=Thaps7683;rank=1 chr8 . exon 855043 857478 . - . ID=Thaps7683.1;Parent=Thaps7683;constitutive=1;rank=1 chr8 . repeat_region 858786 858806 . ? . description=trf chr8 . repeat_region 858786 858806 . ? . description=dust chr8 . repeat_region 863746 863871 . - . description=Gypsy1LTR_TP chr8 . repeat_region 863897 864550 . - . description=TE2c_TP chr8 . repeat_region 864214 864289 . ? . description=trf chr8 ensembl protein_coding_gene 858118 861798 . + . ID=Thaps263431;biotype=protein_coding;description=Probable metalloprotease [Source:UniProtKB/TrEMBL%3BAcc:B8C782];external_name=Thaps263431;logic_name=jgi_thaps3 chr8 ensembl transcript 858118 861798 . + . ID=Thaps263431;Parent=Thaps263431;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 858118 858196 . + 0 ID=Thaps263431;Parent=Thaps263431;rank=1 chr8 . exon 858118 858196 . + . ID=Thaps263431.1;Parent=Thaps263431;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 858329 858739 . + 0 ID=Thaps263431;Parent=Thaps263431;rank=2 chr8 . exon 858329 858739 . + . ID=Thaps263431.2;Parent=Thaps263431;constitutive=1;rank=2 chr8 . CDS 858785 859447 . + 0 ID=Thaps263431;Parent=Thaps263431;rank=3 chr8 . exon 858785 859447 . + . ID=Thaps263431.3;Parent=Thaps263431;constitutive=1;rank=3 chr8 . CDS 859466 859761 . + 0 ID=Thaps263431;Parent=Thaps263431;rank=4 chr8 . exon 859466 859761 . + . ID=Thaps263431.4;Parent=Thaps263431;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 859927 860140 . + 0 ID=Thaps263431;Parent=Thaps263431;rank=5 chr8 . exon 859927 860140 . + . ID=Thaps263431.5;Parent=Thaps263431;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 860516 860805 . + 0 ID=Thaps263431;Parent=Thaps263431;rank=6 chr8 . exon 860516 860805 . + . ID=Thaps263431.6;Parent=Thaps263431;constitutive=1;ensembl_end_phase=2;rank=6 chr8 . CDS 860839 861798 . + 0 ID=Thaps263431;Parent=Thaps263431;rank=7 chr8 . exon 860839 861798 . + . ID=Thaps263431.7;Parent=Thaps263431;constitutive=1;rank=7 chr8 ensembl protein_coding_gene 862240 863467 . + . ID=Thaps35816;biotype=protein_coding;description=Glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C783];external_name=GAPD2;logic_name=jgi_thaps3 chr8 ensembl transcript 862240 863467 . + . ID=Thaps35816;Parent=Thaps35816;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 862240 862280 . + 0 ID=Thaps35816;Parent=Thaps35816;rank=1 chr8 . exon 862240 862280 . + . ID=Thaps35816.1;Parent=Thaps35816;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 862356 862768 . + 0 ID=Thaps35816;Parent=Thaps35816;rank=2 chr8 . exon 862356 862768 . + . ID=Thaps35816.2;Parent=Thaps35816;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 862860 863467 . + 0 ID=Thaps35816;Parent=Thaps35816;rank=3 chr8 . exon 862860 863467 . + . ID=Thaps35816.3;Parent=Thaps35816;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 864729 868260 . + . ID=Thaps7686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C784];external_name=Thaps7686;logic_name=jgi_thaps3 chr8 ensembl transcript 864729 868260 . + . ID=Thaps7686;Parent=Thaps7686;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 864729 865657 . + 0 ID=Thaps7686;Parent=Thaps7686;rank=1 chr8 . exon 864729 865657 . + . ID=Thaps7686.1;Parent=Thaps7686;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 865731 865864 . + 0 ID=Thaps7686;Parent=Thaps7686;rank=2 chr8 . exon 865731 865864 . + . ID=Thaps7686.2;Parent=Thaps7686;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 865971 866551 . + 0 ID=Thaps7686;Parent=Thaps7686;rank=3 chr8 . exon 865971 866551 . + . ID=Thaps7686.3;Parent=Thaps7686;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 866608 867228 . + 0 ID=Thaps7686;Parent=Thaps7686;rank=4 chr8 . exon 866608 867228 . + . ID=Thaps7686.4;Parent=Thaps7686;constitutive=1;rank=4 chr8 . CDS 867655 868260 . + 0 ID=Thaps7686;Parent=Thaps7686;rank=5 chr8 . exon 867655 868260 . + . ID=Thaps7686.5;Parent=Thaps7686;constitutive=1;rank=5 chr8 . repeat_region 868270 868772 . + . description=tp16_ASNotSingleton chr8 ensembl protein_coding_gene 872971 874908 . + . ID=Thaps23812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C786];external_name=Thaps23812;logic_name=jgi_thaps3 chr8 ensembl transcript 872971 874908 . + . ID=Thaps23812;Parent=Thaps23812;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 872971 874908 . + 0 ID=Thaps23812;Parent=Thaps23812;rank=1 chr8 . exon 872971 874908 . + . ID=Thaps23812.1;Parent=Thaps23812;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 876295 877552 . - . ID=Thaps23813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C788];external_name=Thaps23813;logic_name=jgi_thaps3 chr8 ensembl transcript 876295 877552 . - . ID=Thaps23813;Parent=Thaps23813;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 876295 876793 . - 0 ID=Thaps23813;Parent=Thaps23813;rank=4 chr8 . exon 876295 876793 . - . ID=Thaps23813.4;Parent=Thaps23813;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 876886 877091 . - 0 ID=Thaps23813;Parent=Thaps23813;rank=3 chr8 . exon 876886 877091 . - . ID=Thaps23813.3;Parent=Thaps23813;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 877175 877315 . - 0 ID=Thaps23813;Parent=Thaps23813;rank=2 chr8 . exon 877175 877315 . - . ID=Thaps23813.2;Parent=Thaps23813;constitutive=1;rank=2 chr8 . CDS 877418 877552 . - 0 ID=Thaps23813;Parent=Thaps23813;rank=1 chr8 . exon 877418 877552 . - . ID=Thaps23813.1;Parent=Thaps23813;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 877847 879861 . + . ID=Thaps23814;biotype=protein_coding;description=Probable serine protease inhibitor [Source:UniProtKB/TrEMBL%3BAcc:B8C789];external_name=Thaps23814;logic_name=jgi_thaps3 chr8 ensembl transcript 877847 879861 . + . ID=Thaps23814;Parent=Thaps23814;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 877847 877981 . + 0 ID=Thaps23814;Parent=Thaps23814;rank=1 chr8 . exon 877847 877981 . + . ID=Thaps23814.1;Parent=Thaps23814;constitutive=1;rank=1 chr8 . CDS 878084 878224 . + 0 ID=Thaps23814;Parent=Thaps23814;rank=2 chr8 . CDS 878308 878513 . + 0 ID=Thaps23814;Parent=Thaps23814;rank=3 chr8 . CDS 878606 878738 . + 0 ID=Thaps23814;Parent=Thaps23814;rank=4 chr8 . CDS 878841 878981 . + 0 ID=Thaps23814;Parent=Thaps23814;rank=5 chr8 . CDS 879065 879270 . + 0 ID=Thaps23814;Parent=Thaps23814;rank=6 chr8 . CDS 879363 879861 . + 0 ID=Thaps23814;Parent=Thaps23814;rank=7 chr8 ensembl protein_coding_gene 869575 872423 . + . ID=Thaps7687;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C785];external_name=Thaps7687;logic_name=jgi_thaps3 chr8 ensembl transcript 869575 872423 . + . ID=Thaps7687;Parent=Thaps7687;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 869575 870357 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=1 chr8 . exon 869575 870357 . + . ID=Thaps7687.1;Parent=Thaps7687;constitutive=1;rank=1 chr8 . CDS 870453 870554 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=2 chr8 . exon 870453 870554 . + . ID=Thaps7687.2;Parent=Thaps7687;constitutive=1;rank=2 chr8 . CDS 870601 870700 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=3 chr8 . exon 870601 870700 . + . ID=Thaps7687.3;Parent=Thaps7687;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 870798 870824 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=4 chr8 . exon 870798 870824 . + . ID=Thaps7687.4;Parent=Thaps7687;constitutive=1;rank=4 chr8 . CDS 870922 870948 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=5 chr8 . exon 870922 870948 . + . ID=Thaps7687.5;Parent=Thaps7687;constitutive=1;rank=5 chr8 . CDS 871030 871056 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=6 chr8 . exon 871030 871056 . + . ID=Thaps7687.6;Parent=Thaps7687;constitutive=1;rank=6 chr8 . CDS 871154 871180 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=7 chr8 . exon 871154 871180 . + . ID=Thaps7687.7;Parent=Thaps7687;constitutive=1;rank=7 chr8 . CDS 871278 871304 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=8 chr8 . exon 871278 871304 . + . ID=Thaps7687.8;Parent=Thaps7687;constitutive=1;rank=8 chr8 . CDS 871402 871428 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=9 chr8 . exon 871402 871428 . + . ID=Thaps7687.9;Parent=Thaps7687;constitutive=1;rank=9 chr8 . CDS 871526 871552 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=10 chr8 . exon 871526 871552 . + . ID=Thaps7687.10;Parent=Thaps7687;constitutive=1;rank=10 chr8 . CDS 871650 871676 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=11 chr8 . exon 871650 871676 . + . ID=Thaps7687.11;Parent=Thaps7687;constitutive=1;rank=11 chr8 . CDS 871774 871800 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=12 chr8 . exon 871774 871800 . + . ID=Thaps7687.12;Parent=Thaps7687;constitutive=1;rank=12 chr8 . CDS 871898 871924 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=13 chr8 . exon 871898 871924 . + . ID=Thaps7687.13;Parent=Thaps7687;constitutive=1;rank=13 chr8 . CDS 872022 872048 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=14 chr8 . exon 872022 872048 . + . ID=Thaps7687.14;Parent=Thaps7687;constitutive=1;rank=14 chr8 . CDS 872146 872172 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=15 chr8 . exon 872146 872172 . + . ID=Thaps7687.15;Parent=Thaps7687;constitutive=1;rank=15 chr8 . CDS 872266 872423 . + 0 ID=Thaps7687;Parent=Thaps7687;rank=16 chr8 . exon 872266 872423 . + . ID=Thaps7687.16;Parent=Thaps7687;constitutive=1;ensembl_end_phase=2;rank=16 chr8 ensembl protein_coding_gene 875508 876011 . - . ID=Thaps7689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C787];external_name=Thaps7689;logic_name=jgi_thaps3 chr8 ensembl transcript 875508 876011 . - . ID=Thaps7689;Parent=Thaps7689;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 875508 875799 . - 0 ID=Thaps7689;Parent=Thaps7689;rank=2 chr8 . exon 875508 875799 . - . ID=Thaps7689.2;Parent=Thaps7689;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 875836 876011 . - 0 ID=Thaps7689;Parent=Thaps7689;rank=1 chr8 . exon 875836 876011 . - . ID=Thaps7689.1;Parent=Thaps7689;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . repeat_region 880280 880322 . ? . description=trf chr8 . repeat_region 880707 880798 . - . description=Harbinger4_TP chr8 . repeat_region 880796 881727 . - . description=Harbinger4_TP chr8 . repeat_region 881603 881632 . ? . description=trf chr8 . repeat_region 881739 881799 . + . description=Harbinger4_TP chr8 . repeat_region 881740 881812 . - . description=TE2c_TP chr8 . repeat_region 881809 882532 . + . description=Harbinger2_TP chr8 . repeat_region 882535 882673 . + . description=Harbinger2_TP chr8 . repeat_region 882674 883153 . - . description=TE2c_TP chr8 . repeat_region 882736 882811 . ? . description=trf chr8 . repeat_region 882902 882909 . ? . description=dust chr8 . repeat_region 883182 883931 . - . description=TE2c_TP chr8 . repeat_region 883522 883633 . ? . description=trf chr8 . repeat_region 883522 883633 . ? . description=dust chr8 . repeat_region 883522 883636 . ? . description=trf chr8 . repeat_region 883531 883603 . ? . description=trf chr8 . repeat_region 883589 883630 . ? . description=trf chr8 . repeat_region 883648 883656 . ? . description=dust chr8 . repeat_region 883932 883977 . - . description=TE2c_TP chr8 . repeat_region 883969 884741 . + . description=Harbinger2_TP chr8 . repeat_region 884426 884476 . ? . description=trf chr8 . repeat_region 884674 884682 . ? . description=dust chr8 . repeat_region 884752 884789 . - . description=TE2c_TP chr8 . repeat_region 885055 885097 . ? . description=trf chr8 . exon 878084 878224 . + . ID=Thaps23814.2;Parent=Thaps23814;constitutive=1;rank=2 chr8 . exon 878308 878513 . + . ID=Thaps23814.3;Parent=Thaps23814;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . exon 878606 878738 . + . ID=Thaps23814.4;Parent=Thaps23814;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . exon 878841 878981 . + . ID=Thaps23814.5;Parent=Thaps23814;constitutive=1;rank=5 chr8 . exon 879065 879270 . + . ID=Thaps23814.6;Parent=Thaps23814;constitutive=1;ensembl_end_phase=2;rank=6 chr8 . exon 879363 879861 . + . ID=Thaps23814.7;Parent=Thaps23814;constitutive=1;ensembl_end_phase=1;rank=7 chr8 ensembl protein_coding_gene 886319 888083 . - . ID=Thaps23815;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C791];external_name=Thaps23815;logic_name=jgi_thaps3 chr8 ensembl transcript 886319 888083 . - . ID=Thaps23815;Parent=Thaps23815;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 886319 887177 . - 0 ID=Thaps23815;Parent=Thaps23815;rank=2 chr8 . exon 886319 887177 . - . ID=Thaps23815.2;Parent=Thaps23815;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 887434 888083 . - 0 ID=Thaps23815;Parent=Thaps23815;rank=1 chr8 . exon 887434 888083 . - . ID=Thaps23815.1;Parent=Thaps23815;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 885020 886087 . + . ID=Thaps7692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C790];external_name=Thaps7692;logic_name=jgi_thaps3 chr8 ensembl transcript 885020 886087 . + . ID=Thaps7692;Parent=Thaps7692;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 885020 886087 . + 0 ID=Thaps7692;Parent=Thaps7692;rank=1 chr8 . exon 885020 886087 . + . ID=Thaps7692.1;Parent=Thaps7692;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 888840 890999 . + . ID=Thaps23816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C792];external_name=Thaps23816;logic_name=jgi_thaps3 chr8 ensembl transcript 888840 890999 . + . ID=Thaps23816;Parent=Thaps23816;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 888840 890633 . + 0 ID=Thaps23816;Parent=Thaps23816;rank=1 chr8 . exon 888840 890633 . + . ID=Thaps23816.1;Parent=Thaps23816;constitutive=1;rank=1 chr8 . CDS 890733 890744 . + 0 ID=Thaps23816;Parent=Thaps23816;rank=2 chr8 . exon 890733 890744 . + . ID=Thaps23816.2;Parent=Thaps23816;constitutive=1;rank=2 chr8 . CDS 890877 890999 . + 0 ID=Thaps23816;Parent=Thaps23816;rank=3 chr8 . exon 890877 890999 . + . ID=Thaps23816.3;Parent=Thaps23816;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 891407 898737 . + . ID=Thaps7695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C793];external_name=Thaps7695;logic_name=jgi_thaps3 chr8 ensembl transcript 891407 898737 . + . ID=Thaps7695;Parent=Thaps7695;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 891407 891536 . + 0 ID=Thaps7695;Parent=Thaps7695;rank=1 chr8 . exon 891407 891536 . + . ID=Thaps7695.1;Parent=Thaps7695;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 891808 893002 . + 0 ID=Thaps7695;Parent=Thaps7695;rank=2 chr8 . exon 891808 893002 . + . ID=Thaps7695.2;Parent=Thaps7695;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 893089 894147 . + 0 ID=Thaps7695;Parent=Thaps7695;rank=3 chr8 . exon 893089 894147 . + . ID=Thaps7695.3;Parent=Thaps7695;constitutive=1;rank=3 chr8 . CDS 894219 898024 . + 0 ID=Thaps7695;Parent=Thaps7695;rank=4 chr8 . exon 894219 898024 . + . ID=Thaps7695.4;Parent=Thaps7695;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 898121 898737 . + 0 ID=Thaps7695;Parent=Thaps7695;rank=5 chr8 . repeat_region 900040 900064 . ? . description=trf chr8 . repeat_region 906113 906276 . - . description=TE2c_TP chr8 ensembl protein_coding_gene 902334 905954 . + . ID=Thaps23817;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C795];external_name=Thaps23817;logic_name=jgi_thaps3 chr8 ensembl transcript 902334 905954 . + . ID=Thaps23817;Parent=Thaps23817;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 902334 903498 . + 0 ID=Thaps23817;Parent=Thaps23817;rank=1 chr8 . exon 902334 903498 . + . ID=Thaps23817.1;Parent=Thaps23817;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 903630 904303 . + 0 ID=Thaps23817;Parent=Thaps23817;rank=2 chr8 . exon 903630 904303 . + . ID=Thaps23817.2;Parent=Thaps23817;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 904395 905954 . + 0 ID=Thaps23817;Parent=Thaps23817;rank=3 chr8 . exon 904395 905954 . + . ID=Thaps23817.3;Parent=Thaps23817;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 906500 907720 . - . ID=Thaps23818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C796];external_name=Thaps23818;logic_name=jgi_thaps3 chr8 ensembl transcript 906500 907720 . - . ID=Thaps23818;Parent=Thaps23818;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 906500 906636 . - 0 ID=Thaps23818;Parent=Thaps23818;rank=2 chr8 . exon 906500 906636 . - . ID=Thaps23818.2;Parent=Thaps23818;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 906721 907720 . - 0 ID=Thaps23818;Parent=Thaps23818;rank=1 chr8 . exon 906721 907720 . - . ID=Thaps23818.1;Parent=Thaps23818;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . exon 898121 898737 . + . ID=Thaps7695.5;Parent=Thaps7695;constitutive=1;ensembl_end_phase=2;rank=5 chr8 ensembl protein_coding_gene 900840 902093 . - . ID=Thaps7696;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C794];external_name=Thaps7696;logic_name=jgi_thaps3 chr8 ensembl transcript 900840 902093 . - . ID=Thaps7696;Parent=Thaps7696;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 900840 902093 . - 0 ID=Thaps7696;Parent=Thaps7696;rank=1 chr8 . exon 900840 902093 . - . ID=Thaps7696.1;Parent=Thaps7696;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 911022 912551 . + . ID=Thaps23819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C799];external_name=Thaps23819;logic_name=jgi_thaps3 chr8 ensembl transcript 911022 912551 . + . ID=Thaps23819;Parent=Thaps23819;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 911022 911123 . + 0 ID=Thaps23819;Parent=Thaps23819;rank=1 chr8 . exon 911022 911123 . + . ID=Thaps23819.1;Parent=Thaps23819;constitutive=1;rank=1 chr8 . CDS 911361 912551 . + 0 ID=Thaps23819;Parent=Thaps23819;rank=2 chr8 . exon 911361 912551 . + . ID=Thaps23819.2;Parent=Thaps23819;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 914278 915330 . - . ID=Thaps23820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7A1];external_name=Thaps23820;logic_name=jgi_thaps3 chr8 ensembl transcript 914278 915330 . - . ID=Thaps23820;Parent=Thaps23820;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 914278 915330 . - 0 ID=Thaps23820;Parent=Thaps23820;rank=1 chr8 . exon 914278 915330 . - . ID=Thaps23820.1;Parent=Thaps23820;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 908133 909497 . + . ID=Thaps7699;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C797];external_name=Thaps7699;logic_name=jgi_thaps3 chr8 ensembl transcript 908133 909497 . + . ID=Thaps7699;Parent=Thaps7699;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 908133 908422 . + 0 ID=Thaps7699;Parent=Thaps7699;rank=1 chr8 . exon 908133 908422 . + . ID=Thaps7699.1;Parent=Thaps7699;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 908519 909497 . + 0 ID=Thaps7699;Parent=Thaps7699;rank=2 chr8 . exon 908519 909497 . + . ID=Thaps7699.2;Parent=Thaps7699;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 909598 910785 . - . ID=Thaps7700;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C798];external_name=Thaps7700;logic_name=jgi_thaps3 chr8 ensembl transcript 909598 910785 . - . ID=Thaps7700;Parent=Thaps7700;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 909598 910785 . - 0 ID=Thaps7700;Parent=Thaps7700;rank=1 chr8 . exon 909598 910785 . - . ID=Thaps7700.1;Parent=Thaps7700;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 912810 913985 . + . ID=Thaps7702;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7A0];external_name=Thaps7702;logic_name=jgi_thaps3 chr8 ensembl transcript 912810 913985 . + . ID=Thaps7702;Parent=Thaps7702;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 912810 913985 . + 0 ID=Thaps7702;Parent=Thaps7702;rank=1 chr8 . exon 912810 913985 . + . ID=Thaps7702.1;Parent=Thaps7702;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 916080 918157 . + . ID=Thaps7704;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7A2];external_name=Thaps7704;logic_name=jgi_thaps3 chr8 ensembl transcript 916080 918157 . + . ID=Thaps7704;Parent=Thaps7704;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 916080 916208 . + 0 ID=Thaps7704;Parent=Thaps7704;rank=1 chr8 . exon 916080 916208 . + . ID=Thaps7704.1;Parent=Thaps7704;constitutive=1;rank=1 chr8 . CDS 916300 916423 . + 0 ID=Thaps7704;Parent=Thaps7704;rank=2 chr8 . exon 916300 916423 . + . ID=Thaps7704.2;Parent=Thaps7704;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 916526 917250 . + 0 ID=Thaps7704;Parent=Thaps7704;rank=3 chr8 . exon 916526 917250 . + . ID=Thaps7704.3;Parent=Thaps7704;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 917324 917436 . + 0 ID=Thaps7704;Parent=Thaps7704;rank=4 chr8 . exon 917324 917436 . + . ID=Thaps7704.4;Parent=Thaps7704;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 917518 918157 . + 0 ID=Thaps7704;Parent=Thaps7704;rank=5 chr8 . exon 917518 918157 . + . ID=Thaps7704.5;Parent=Thaps7704;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . repeat_region 922086 922093 . ? . description=dust chr8 ensembl protein_coding_gene 921140 922463 . - . ID=Thaps23821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7A4];external_name=Thaps23821;logic_name=jgi_thaps3 chr8 ensembl transcript 921140 922463 . - . ID=Thaps23821;Parent=Thaps23821;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 921140 921695 . - 0 ID=Thaps23821;Parent=Thaps23821;rank=3 chr8 . exon 921140 921695 . - . ID=Thaps23821.3;Parent=Thaps23821;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 921780 922050 . - 0 ID=Thaps23821;Parent=Thaps23821;rank=2 chr8 . exon 921780 922050 . - . ID=Thaps23821.2;Parent=Thaps23821;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 922133 922463 . - 0 ID=Thaps23821;Parent=Thaps23821;rank=1 chr8 . exon 922133 922463 . - . ID=Thaps23821.1;Parent=Thaps23821;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 918267 919022 . - . ID=Thaps263436;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7A3];external_name=Thaps263436;logic_name=jgi_thaps3 chr8 ensembl transcript 918267 919022 . - . ID=Thaps263436;Parent=Thaps263436;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 918267 918658 . - 0 ID=Thaps263436;Parent=Thaps263436;rank=3 chr8 . exon 918267 918658 . - . ID=Thaps263436.3;Parent=Thaps263436;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 918695 918860 . - 0 ID=Thaps263436;Parent=Thaps263436;rank=2 chr8 . exon 918695 918860 . - . ID=Thaps263436.2;Parent=Thaps263436;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 918885 919022 . - 0 ID=Thaps263436;Parent=Thaps263436;rank=1 chr8 . exon 918885 919022 . - . ID=Thaps263436.1;Parent=Thaps263436;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 926775 927264 . - . ID=Thaps263437;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7A7];external_name=Thaps263437;logic_name=jgi_thaps3 chr8 ensembl transcript 926775 927264 . - . ID=Thaps263437;Parent=Thaps263437;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 926775 926833 . - 0 ID=Thaps263437;Parent=Thaps263437;rank=3 chr8 . exon 926775 926833 . - . ID=Thaps263437.3;Parent=Thaps263437;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 926861 927105 . - 0 ID=Thaps263437;Parent=Thaps263437;rank=2 chr8 . exon 926861 927105 . - . ID=Thaps263437.2;Parent=Thaps263437;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 927148 927264 . - 0 ID=Thaps263437;Parent=Thaps263437;rank=1 chr8 . exon 927148 927264 . - . ID=Thaps263437.1;Parent=Thaps263437;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 922801 924179 . - . ID=Thaps7707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7A5];external_name=Thaps7707;logic_name=jgi_thaps3 chr8 ensembl transcript 922801 924179 . - . ID=Thaps7707;Parent=Thaps7707;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 922801 923657 . - 0 ID=Thaps7707;Parent=Thaps7707;rank=2 chr8 . exon 922801 923657 . - . ID=Thaps7707.2;Parent=Thaps7707;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 923747 924179 . - 0 ID=Thaps7707;Parent=Thaps7707;rank=1 chr8 . exon 923747 924179 . - . ID=Thaps7707.1;Parent=Thaps7707;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 924566 925552 . + . ID=Thaps7708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7A6];external_name=Thaps7708;logic_name=jgi_thaps3 chr8 ensembl transcript 924566 925552 . + . ID=Thaps7708;Parent=Thaps7708;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 924566 925552 . + 0 ID=Thaps7708;Parent=Thaps7708;rank=1 chr8 . exon 924566 925552 . + . ID=Thaps7708.1;Parent=Thaps7708;constitutive=1;rank=1 chr8 . repeat_region 936658 936689 . ? . description=trf chr8 ensembl protein_coding_gene 936722 939537 . + . ID=Thaps269376;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C7B1];external_name=Thaps269376;logic_name=jgi_thaps3 chr8 ensembl transcript 936722 939537 . + . ID=Thaps269376;Parent=Thaps269376;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 936722 937143 . + 0 ID=Thaps269376;Parent=Thaps269376;rank=1 chr8 . exon 936722 937143 . + . ID=Thaps269376.1;Parent=Thaps269376;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 937278 939537 . + 0 ID=Thaps269376;Parent=Thaps269376;rank=2 chr8 . exon 937278 939537 . + . ID=Thaps269376.2;Parent=Thaps269376;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 931386 933177 . - . ID=Thaps29212;biotype=protein_coding;description=Glutathione synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C7A9];external_name=GSHS;logic_name=jgi_thaps3 chr8 ensembl transcript 931386 933177 . - . ID=Thaps29212;Parent=Thaps29212;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 931386 932315 . - 0 ID=Thaps29212;Parent=Thaps29212;rank=3 chr8 . exon 931386 932315 . - . ID=Thaps29212.3;Parent=Thaps29212;constitutive=1;rank=3 chr8 . CDS 932415 932707 . - 0 ID=Thaps29212;Parent=Thaps29212;rank=2 chr8 . exon 932415 932707 . - . ID=Thaps29212.2;Parent=Thaps29212;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 932799 933177 . - 0 ID=Thaps29212;Parent=Thaps29212;rank=1 chr8 . exon 932799 933177 . - . ID=Thaps29212.1;Parent=Thaps29212;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 935547 936278 . - . ID=Thaps29217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7B0];external_name=Thaps29217;logic_name=jgi_thaps3 chr8 ensembl transcript 935547 936278 . - . ID=Thaps29217;Parent=Thaps29217;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 935547 935855 . - 0 ID=Thaps29217;Parent=Thaps29217;rank=2 chr8 . exon 935547 935855 . - . ID=Thaps29217.2;Parent=Thaps29217;constitutive=1;rank=2 chr8 . CDS 936255 936278 . - 0 ID=Thaps29217;Parent=Thaps29217;rank=1 chr8 . exon 936255 936278 . - . ID=Thaps29217.1;Parent=Thaps29217;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 930225 931049 . + . ID=Thaps7709;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7A8];external_name=Thaps7709;logic_name=jgi_thaps3 chr8 ensembl transcript 930225 931049 . + . ID=Thaps7709;Parent=Thaps7709;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 930225 930590 . + 0 ID=Thaps7709;Parent=Thaps7709;rank=1 chr8 . exon 930225 930590 . + . ID=Thaps7709.1;Parent=Thaps7709;constitutive=1;rank=1 chr8 . CDS 930690 931049 . + 0 ID=Thaps7709;Parent=Thaps7709;rank=2 chr8 . exon 930690 931049 . + . ID=Thaps7709.2;Parent=Thaps7709;constitutive=1;rank=2 chr8 . repeat_region 943389 943445 . ? . description=dust chr8 . repeat_region 945305 945366 . ? . description=dust chr8 . repeat_region 945833 945840 . ? . description=dust chr8 ensembl protein_coding_gene 940150 944595 . + . ID=Thaps23825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7B2];external_name=Thaps23825;logic_name=jgi_thaps3 chr8 ensembl transcript 940150 944595 . + . ID=Thaps23825;Parent=Thaps23825;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 940150 940577 . + 0 ID=Thaps23825;Parent=Thaps23825;rank=1 chr8 . exon 940150 940577 . + . ID=Thaps23825.1;Parent=Thaps23825;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 940688 941366 . + 0 ID=Thaps23825;Parent=Thaps23825;rank=2 chr8 . exon 940688 941366 . + . ID=Thaps23825.2;Parent=Thaps23825;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 941458 941787 . + 0 ID=Thaps23825;Parent=Thaps23825;rank=3 chr8 . exon 941458 941787 . + . ID=Thaps23825.3;Parent=Thaps23825;constitutive=1;rank=3 chr8 . CDS 941877 942224 . + 0 ID=Thaps23825;Parent=Thaps23825;rank=4 chr8 . exon 941877 942224 . + . ID=Thaps23825.4;Parent=Thaps23825;constitutive=1;rank=4 chr8 . CDS 942310 942783 . + 0 ID=Thaps23825;Parent=Thaps23825;rank=5 chr8 . exon 942310 942783 . + . ID=Thaps23825.5;Parent=Thaps23825;constitutive=1;rank=5 chr8 . CDS 943212 943333 . + 0 ID=Thaps23825;Parent=Thaps23825;rank=6 chr8 . exon 943212 943333 . + . ID=Thaps23825.6;Parent=Thaps23825;constitutive=1;ensembl_end_phase=2;rank=6 chr8 . CDS 943391 943525 . + 0 ID=Thaps23825;Parent=Thaps23825;rank=7 chr8 . exon 943391 943525 . + . ID=Thaps23825.7;Parent=Thaps23825;constitutive=1;rank=7 chr8 . CDS 943605 944595 . + 0 ID=Thaps23825;Parent=Thaps23825;rank=8 chr8 . exon 943605 944595 . + . ID=Thaps23825.8;Parent=Thaps23825;constitutive=1;ensembl_end_phase=1;rank=8 chr8 ensembl protein_coding_gene 946713 947216 . + . ID=Thaps36045;biotype=protein_coding;description=Ubiquitin conjugating enzyme [Source:UniProtKB/TrEMBL%3BAcc:B8C7B4];external_name=Thaps36045;logic_name=jgi_thaps3 chr8 ensembl transcript 946713 947216 . + . ID=Thaps36045;Parent=Thaps36045;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 946713 947216 . + 0 ID=Thaps36045;Parent=Thaps36045;rank=1 chr8 . exon 946713 947216 . + . ID=Thaps36045.1;Parent=Thaps36045;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 944913 945710 . - . ID=Thaps7714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7B3];external_name=Thaps7714;logic_name=jgi_thaps3 chr8 ensembl transcript 944913 945710 . - . ID=Thaps7714;Parent=Thaps7714;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 944913 945710 . - 0 ID=Thaps7714;Parent=Thaps7714;rank=1 chr8 . exon 944913 945710 . - . ID=Thaps7714.1;Parent=Thaps7714;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 947466 948422 . + . ID=Thaps7716;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7B5];external_name=Thaps7716;logic_name=jgi_thaps3 chr8 ensembl transcript 947466 948422 . + . ID=Thaps7716;Parent=Thaps7716;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 947466 948422 . + 0 ID=Thaps7716;Parent=Thaps7716;rank=1 chr8 . exon 947466 948422 . + . ID=Thaps7716.1;Parent=Thaps7716;constitutive=1;rank=1 chr8 . biological_region 951989 951990 0.999 + . logic_name=eponine chr8 ensembl protein_coding_gene 954258 955708 . - . ID=Thaps23827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7B7];external_name=Thaps23827;logic_name=jgi_thaps3 chr8 ensembl transcript 954258 955708 . - . ID=Thaps23827;Parent=Thaps23827;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 954258 954338 . - 0 ID=Thaps23827;Parent=Thaps23827;rank=2 chr8 . exon 954258 954338 . - . ID=Thaps23827.2;Parent=Thaps23827;constitutive=1;rank=2 chr8 . CDS 954362 955708 . - 0 ID=Thaps23827;Parent=Thaps23827;rank=1 chr8 . exon 954362 955708 . - . ID=Thaps23827.1;Parent=Thaps23827;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 957611 958639 . + . ID=Thaps23828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7B9];external_name=Thaps23828;logic_name=jgi_thaps3 chr8 ensembl transcript 957611 958639 . + . ID=Thaps23828;Parent=Thaps23828;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 957611 958639 . + 0 ID=Thaps23828;Parent=Thaps23828;rank=1 chr8 . exon 957611 958639 . + . ID=Thaps23828.1;Parent=Thaps23828;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 952818 953994 . + . ID=Thaps35764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7B6];external_name=Thaps35764;logic_name=jgi_thaps3 chr8 ensembl transcript 952818 953994 . + . ID=Thaps35764;Parent=Thaps35764;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 952818 952881 . + 0 ID=Thaps35764;Parent=Thaps35764;rank=1 chr8 . exon 952818 952881 . + . ID=Thaps35764.1;Parent=Thaps35764;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 952958 953994 . + 0 ID=Thaps35764;Parent=Thaps35764;rank=2 chr8 . exon 952958 953994 . + . ID=Thaps35764.2;Parent=Thaps35764;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 956923 957423 . - . ID=Thaps7719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7B8];external_name=Thaps7719;logic_name=jgi_thaps3 chr8 ensembl transcript 956923 957423 . - . ID=Thaps7719;Parent=Thaps7719;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 956923 957423 . - 0 ID=Thaps7719;Parent=Thaps7719;rank=1 chr8 . exon 956923 957423 . - . ID=Thaps7719.1;Parent=Thaps7719;constitutive=1;rank=1 chr8 . repeat_region 958916 958929 . ? . description=dust chr8 . repeat_region 961795 961834 . ? . description=dust chr8 . repeat_region 966448 966457 . ? . description=dust chr8 . repeat_region 967248 967277 . ? . description=trf chr8 ensembl protein_coding_gene 959392 961905 . + . ID=Thaps23829;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7C0];external_name=Thaps23829;logic_name=jgi_thaps3 chr8 ensembl transcript 959392 961905 . + . ID=Thaps23829;Parent=Thaps23829;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 959392 961905 . + 0 ID=Thaps23829;Parent=Thaps23829;rank=1 chr8 . exon 959392 961905 . + . ID=Thaps23829.1;Parent=Thaps23829;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 962076 963605 . - . ID=Thaps23830;biotype=protein_coding;description=Precursor of hydrogenase glutaryl-coa dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C7C1];external_name=GCD1;logic_name=jgi_thaps3 chr8 ensembl transcript 962076 963605 . - . ID=Thaps23830;Parent=Thaps23830;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 962076 963215 . - 0 ID=Thaps23830;Parent=Thaps23830;rank=2 chr8 . exon 962076 963215 . - . ID=Thaps23830.2;Parent=Thaps23830;constitutive=1;rank=2 chr8 . CDS 963333 963605 . - 0 ID=Thaps23830;Parent=Thaps23830;rank=1 chr8 . exon 963333 963605 . - . ID=Thaps23830.1;Parent=Thaps23830;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 965112 965579 . - . ID=Thaps35907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7C3];external_name=Thaps35907;logic_name=jgi_thaps3 chr8 ensembl transcript 965112 965579 . - . ID=Thaps35907;Parent=Thaps35907;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 965112 965579 . - 0 ID=Thaps35907;Parent=Thaps35907;rank=1 chr8 . exon 965112 965579 . - . ID=Thaps35907.1;Parent=Thaps35907;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 963989 964900 . + . ID=Thaps7723;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7C2];external_name=Thaps7723;logic_name=jgi_thaps3 chr8 ensembl transcript 963989 964900 . + . ID=Thaps7723;Parent=Thaps7723;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 963989 964900 . + 0 ID=Thaps7723;Parent=Thaps7723;rank=1 chr8 . exon 963989 964900 . + . ID=Thaps7723.1;Parent=Thaps7723;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 970961 972688 . - . ID=Thaps23831;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7C5];external_name=Thaps23831;logic_name=jgi_thaps3 chr8 ensembl transcript 970961 972688 . - . ID=Thaps23831;Parent=Thaps23831;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 970961 972688 . - 0 ID=Thaps23831;Parent=Thaps23831;rank=1 chr8 . exon 970961 972688 . - . ID=Thaps23831.1;Parent=Thaps23831;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 974634 976169 . - . ID=Thaps23832;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7C7];external_name=Thaps23832;logic_name=jgi_thaps3 chr8 ensembl transcript 974634 976169 . - . ID=Thaps23832;Parent=Thaps23832;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 974634 975448 . - 0 ID=Thaps23832;Parent=Thaps23832;rank=2 chr8 . exon 974634 975448 . - . ID=Thaps23832.2;Parent=Thaps23832;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 975551 976169 . - 0 ID=Thaps23832;Parent=Thaps23832;rank=1 chr8 . exon 975551 976169 . - . ID=Thaps23832.1;Parent=Thaps23832;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 968277 970691 . - . ID=Thaps7725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7C4];external_name=Thaps7725;logic_name=jgi_thaps3 chr8 ensembl transcript 968277 970691 . - . ID=Thaps7725;Parent=Thaps7725;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 968277 969389 . - 0 ID=Thaps7725;Parent=Thaps7725;rank=2 chr8 . exon 968277 969389 . - . ID=Thaps7725.2;Parent=Thaps7725;constitutive=1;rank=2 chr8 . CDS 969498 970691 . - 0 ID=Thaps7725;Parent=Thaps7725;rank=1 chr8 . exon 969498 970691 . - . ID=Thaps7725.1;Parent=Thaps7725;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 973227 974462 . + . ID=Thaps7727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7C6];external_name=Thaps7727;logic_name=jgi_thaps3 chr8 ensembl transcript 973227 974462 . + . ID=Thaps7727;Parent=Thaps7727;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 973227 974462 . + 0 ID=Thaps7727;Parent=Thaps7727;rank=1 chr8 . exon 973227 974462 . + . ID=Thaps7727.1;Parent=Thaps7727;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 976600 980403 . + . ID=Thaps7729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7C8];external_name=Thaps7729;logic_name=jgi_thaps3 chr8 ensembl transcript 976600 980403 . + . ID=Thaps7729;Parent=Thaps7729;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 976600 976825 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=1 chr8 . exon 976600 976825 . + . ID=Thaps7729.1;Parent=Thaps7729;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 976858 977945 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=2 chr8 . exon 976858 977945 . + . ID=Thaps7729.2;Parent=Thaps7729;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 978027 978401 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=3 chr8 . CDS 978478 978594 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=4 chr8 . CDS 978670 978894 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=5 chr8 . CDS 978980 979117 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=6 chr8 . CDS 979199 979444 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=7 chr8 . CDS 979579 979624 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=8 chr8 . CDS 979721 979857 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=9 chr8 . CDS 979937 980104 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=10 chr8 . CDS 980170 980403 . + 0 ID=Thaps7729;Parent=Thaps7729;rank=11 chr8 . repeat_region 985305 985343 . ? . description=trf chr8 . repeat_region 985305 985343 . ? . description=dust chr8 . repeat_region 985431 985450 . ? . description=trf chr8 ensembl protein_coding_gene 981144 982372 . - . ID=Thaps23833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7C9];external_name=Thaps23833;logic_name=jgi_thaps3 chr8 ensembl transcript 981144 982372 . - . ID=Thaps23833;Parent=Thaps23833;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 981144 981585 . - 0 ID=Thaps23833;Parent=Thaps23833;rank=2 chr8 . exon 981144 981585 . - . ID=Thaps23833.2;Parent=Thaps23833;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 981660 982372 . - 0 ID=Thaps23833;Parent=Thaps23833;rank=1 chr8 . exon 981660 982372 . - . ID=Thaps23833.1;Parent=Thaps23833;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 984442 986745 . - . ID=Thaps23834;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7D0];external_name=Thaps23834;logic_name=jgi_thaps3 chr8 ensembl transcript 984442 986745 . - . ID=Thaps23834;Parent=Thaps23834;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 984442 986745 . - 0 ID=Thaps23834;Parent=Thaps23834;rank=1 chr8 . exon 984442 986745 . - . ID=Thaps23834.1;Parent=Thaps23834;constitutive=1;rank=1 chr8 . exon 978027 978401 . + . ID=Thaps7729.3;Parent=Thaps7729;constitutive=1;rank=3 chr8 . exon 978478 978594 . + . ID=Thaps7729.4;Parent=Thaps7729;constitutive=1;rank=4 chr8 . exon 978670 978894 . + . ID=Thaps7729.5;Parent=Thaps7729;constitutive=1;rank=5 chr8 . exon 978980 979117 . + . ID=Thaps7729.6;Parent=Thaps7729;constitutive=1;rank=6 chr8 . exon 979199 979444 . + . ID=Thaps7729.7;Parent=Thaps7729;constitutive=1;rank=7 chr8 . exon 979579 979624 . + . ID=Thaps7729.8;Parent=Thaps7729;constitutive=1;ensembl_end_phase=1;rank=8 chr8 . exon 979721 979857 . + . ID=Thaps7729.9;Parent=Thaps7729;constitutive=1;ensembl_end_phase=2;rank=9 chr8 . exon 979937 980104 . + . ID=Thaps7729.10;Parent=Thaps7729;constitutive=1;rank=10 chr8 . exon 980170 980403 . + . ID=Thaps7729.11;Parent=Thaps7729;constitutive=1;rank=11 chr8 ensembl protein_coding_gene 988772 990406 . + . ID=Thaps23835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7D1];external_name=Thaps23835;logic_name=jgi_thaps3 chr8 ensembl transcript 988772 990406 . + . ID=Thaps23835;Parent=Thaps23835;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 988772 990406 . + 0 ID=Thaps23835;Parent=Thaps23835;rank=1 chr8 . exon 988772 990406 . + . ID=Thaps23835.1;Parent=Thaps23835;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 991670 994695 . + . ID=Thaps23836;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7D2];external_name=Thaps23836;logic_name=jgi_thaps3 chr8 ensembl transcript 991670 994695 . + . ID=Thaps23836;Parent=Thaps23836;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 991670 991723 . + 0 ID=Thaps23836;Parent=Thaps23836;rank=1 chr8 . exon 991670 991723 . + . ID=Thaps23836.1;Parent=Thaps23836;constitutive=1;rank=1 chr8 . CDS 991774 993948 . + 0 ID=Thaps23836;Parent=Thaps23836;rank=2 chr8 . exon 991774 993948 . + . ID=Thaps23836.2;Parent=Thaps23836;constitutive=1;rank=2 chr8 . CDS 993982 994695 . + 0 ID=Thaps23836;Parent=Thaps23836;rank=3 chr8 . exon 993982 994695 . + . ID=Thaps23836.3;Parent=Thaps23836;constitutive=1;rank=3 chr8 ensembl protein_coding_gene 996605 997459 . + . ID=Thaps7734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7D3];external_name=Thaps7734;logic_name=jgi_thaps3 chr8 ensembl transcript 996605 997459 . + . ID=Thaps7734;Parent=Thaps7734;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 996605 996871 . + 0 ID=Thaps7734;Parent=Thaps7734;rank=1 chr8 . exon 996605 996871 . + . ID=Thaps7734.1;Parent=Thaps7734;constitutive=1;rank=1 chr8 . CDS 997046 997459 . + 0 ID=Thaps7734;Parent=Thaps7734;rank=2 chr8 . exon 997046 997459 . + . ID=Thaps7734.2;Parent=Thaps7734;constitutive=1;rank=2 chr8 . repeat_region 998433 998472 . ? . description=trf chr8 . repeat_region 998484 998510 . ? . description=trf chr8 . repeat_region 1002122 1002159 . ? . description=trf chr8 . repeat_region 1002122 1002161 . ? . description=dust chr8 . repeat_region 1002222 1002230 . ? . description=dust chr8 . repeat_region 1002957 1002975 . ? . description=dust chr8 . repeat_region 1005847 1005855 . ? . description=dust chr8 . repeat_region 1006552 1006669 . - . description=TE1A_TP chr8 . repeat_region 1006820 1007119 . ? . description=trf chr8 . repeat_region 1006974 1007026 . - . description=TE1A_TP chr8 . repeat_region 1007655 1007671 . ? . description=dust chr8 ensembl protein_coding_gene 997809 998174 . - . ID=Thaps19158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7D4];external_name=Thaps19158;logic_name=jgi_thaps3 chr8 ensembl transcript 997809 998174 . - . ID=Thaps19158;Parent=Thaps19158;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 997809 998174 . - 0 ID=Thaps19158;Parent=Thaps19158;rank=1 chr8 . exon 997809 998174 . - . ID=Thaps19158.1;Parent=Thaps19158;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1007761 1010781 . + . ID=Thaps23841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7D7];external_name=Thaps23841;logic_name=jgi_thaps3 chr8 ensembl transcript 1007761 1010781 . + . ID=Thaps23841;Parent=Thaps23841;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1007761 1010781 . + 0 ID=Thaps23841;Parent=Thaps23841;rank=1 chr8 . exon 1007761 1010781 . + . ID=Thaps23841.1;Parent=Thaps23841;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 999542 1001675 . - . ID=Thaps29228;biotype=protein_coding;description=Gcpe-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7D5];external_name=GCPE;logic_name=jgi_thaps3 chr8 ensembl transcript 999542 1001675 . - . ID=Thaps29228;Parent=Thaps29228;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 999542 1000258 . - 0 ID=Thaps29228;Parent=Thaps29228;rank=2 chr8 . exon 999542 1000258 . - . ID=Thaps29228.2;Parent=Thaps29228;constitutive=1;rank=2 chr8 . CDS 1000332 1001675 . - 0 ID=Thaps29228;Parent=Thaps29228;rank=1 chr8 . exon 1000332 1001675 . - . ID=Thaps29228.1;Parent=Thaps29228;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1002436 1004594 . - . ID=Thaps29232;biotype=protein_coding;description=Lysyl-tRNA synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C7D6];external_name=Thaps29232;logic_name=jgi_thaps3 chr8 ensembl transcript 1002436 1004594 . - . ID=Thaps29232;Parent=Thaps29232;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1002436 1002771 . - 0 ID=Thaps29232;Parent=Thaps29232;rank=3 chr8 . exon 1002436 1002771 . - . ID=Thaps29232.3;Parent=Thaps29232;constitutive=1;rank=3 chr8 . CDS 1003016 1004347 . - 0 ID=Thaps29232;Parent=Thaps29232;rank=2 chr8 . exon 1003016 1004347 . - . ID=Thaps29232.2;Parent=Thaps29232;constitutive=1;rank=2 chr8 . CDS 1004430 1004594 . - 0 ID=Thaps29232;Parent=Thaps29232;rank=1 chr8 . exon 1004430 1004594 . - . ID=Thaps29232.1;Parent=Thaps29232;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1012939 1013635 . + . ID=Thaps18503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7E0];external_name=Thaps18503;logic_name=jgi_thaps3 chr8 ensembl transcript 1012939 1013635 . + . ID=Thaps18503;Parent=Thaps18503;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1012939 1012995 . + 0 ID=Thaps18503;Parent=Thaps18503;rank=1 chr8 . exon 1012939 1012995 . + . ID=Thaps18503.1;Parent=Thaps18503;constitutive=1;rank=1 chr8 . CDS 1013107 1013132 . + 0 ID=Thaps18503;Parent=Thaps18503;rank=2 chr8 . exon 1013107 1013132 . + . ID=Thaps18503.2;Parent=Thaps18503;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1013227 1013271 . + 0 ID=Thaps18503;Parent=Thaps18503;rank=3 chr8 . exon 1013227 1013271 . + . ID=Thaps18503.3;Parent=Thaps18503;constitutive=1;rank=3 chr8 . CDS 1013350 1013635 . + 0 ID=Thaps18503;Parent=Thaps18503;rank=4 chr8 . exon 1013350 1013635 . + . ID=Thaps18503.4;Parent=Thaps18503;constitutive=1;ensembl_end_phase=1;rank=4 chr8 ensembl protein_coding_gene 1012002 1012741 . - . ID=Thaps35830;biotype=protein_coding;description=Phosphatidylinositol synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C7D9];external_name=Thaps35830;logic_name=jgi_thaps3 chr8 ensembl transcript 1012002 1012741 . - . ID=Thaps35830;Parent=Thaps35830;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1012002 1012334 . - 0 ID=Thaps35830;Parent=Thaps35830;rank=2 chr8 . exon 1012002 1012334 . - . ID=Thaps35830.2;Parent=Thaps35830;constitutive=1;rank=2 chr8 . CDS 1012430 1012741 . - 0 ID=Thaps35830;Parent=Thaps35830;rank=1 chr8 . exon 1012430 1012741 . - . ID=Thaps35830.1;Parent=Thaps35830;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1010996 1011559 . - . ID=Thaps7740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7D8];external_name=Thaps7740;logic_name=jgi_thaps3 chr8 ensembl transcript 1010996 1011559 . - . ID=Thaps7740;Parent=Thaps7740;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1010996 1011559 . - 0 ID=Thaps7740;Parent=Thaps7740;rank=1 chr8 . exon 1010996 1011559 . - . ID=Thaps7740.1;Parent=Thaps7740;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1015016 1016400 . - . ID=Thaps7742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7E1];external_name=Thaps7742;logic_name=jgi_thaps3 chr8 ensembl transcript 1015016 1016400 . - . ID=Thaps7742;Parent=Thaps7742;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1015016 1015306 . - 0 ID=Thaps7742;Parent=Thaps7742;rank=2 chr8 . exon 1015016 1015306 . - . ID=Thaps7742.2;Parent=Thaps7742;constitutive=1;rank=2 chr8 . CDS 1015393 1016400 . - 0 ID=Thaps7742;Parent=Thaps7742;rank=1 chr8 . exon 1015393 1016400 . - . ID=Thaps7742.1;Parent=Thaps7742;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1017255 1017854 . + . ID=Thaps7743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7E2];external_name=Thaps7743;logic_name=jgi_thaps3 chr8 ensembl transcript 1017255 1017854 . + . ID=Thaps7743;Parent=Thaps7743;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1017255 1017854 . + 0 ID=Thaps7743;Parent=Thaps7743;rank=1 chr8 . exon 1017255 1017854 . + . ID=Thaps7743.1;Parent=Thaps7743;constitutive=1;rank=1 chr8 . repeat_region 1020778 1020786 . ? . description=dust chr8 . repeat_region 1021052 1021059 . ? . description=dust chr8 . biological_region 1022436 1022438 0.999 - . logic_name=eponine chr8 . repeat_region 1026260 1026295 . ? . description=trf chr8 ensembl protein_coding_gene 1023389 1023931 . + . ID=Thaps17747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7E6];external_name=Thaps17747;logic_name=jgi_thaps3 chr8 ensembl transcript 1023389 1023931 . + . ID=Thaps17747;Parent=Thaps17747;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1023389 1023931 . + 0 ID=Thaps17747;Parent=Thaps17747;rank=1 chr8 . exon 1023389 1023931 . + . ID=Thaps17747.1;Parent=Thaps17747;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1026364 1028145 . + . ID=Thaps23847;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7E8];external_name=Thaps23847;logic_name=jgi_thaps3 chr8 ensembl transcript 1026364 1028145 . + . ID=Thaps23847;Parent=Thaps23847;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1026364 1026561 . + 0 ID=Thaps23847;Parent=Thaps23847;rank=1 chr8 . exon 1026364 1026561 . + . ID=Thaps23847.1;Parent=Thaps23847;constitutive=1;rank=1 chr8 . CDS 1026838 1028145 . + 0 ID=Thaps23847;Parent=Thaps23847;rank=2 chr8 . exon 1026838 1028145 . + . ID=Thaps23847.2;Parent=Thaps23847;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 1021103 1022692 . - . ID=Thaps29237;biotype=protein_coding;description=Tubulin gamma [Source:UniProtKB/TrEMBL%3BAcc:B8C7E5];external_name=TUB4;logic_name=jgi_thaps3 chr8 ensembl transcript 1021103 1022692 . - . ID=Thaps29237;Parent=Thaps29237;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1021103 1022473 . - 0 ID=Thaps29237;Parent=Thaps29237;rank=2 chr8 . exon 1021103 1022473 . - . ID=Thaps29237.2;Parent=Thaps29237;constitutive=1;rank=2 chr8 . CDS 1022558 1022692 . - 0 ID=Thaps29237;Parent=Thaps29237;rank=1 chr8 . exon 1022558 1022692 . - . ID=Thaps29237.1;Parent=Thaps29237;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1018018 1018809 . - . ID=Thaps35768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7E3];external_name=Thaps35768;logic_name=jgi_thaps3 chr8 ensembl transcript 1018018 1018809 . - . ID=Thaps35768;Parent=Thaps35768;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1018018 1018369 . - 0 ID=Thaps35768;Parent=Thaps35768;rank=2 chr8 . exon 1018018 1018369 . - . ID=Thaps35768.2;Parent=Thaps35768;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1018466 1018809 . - 0 ID=Thaps35768;Parent=Thaps35768;rank=1 chr8 . exon 1018466 1018809 . - . ID=Thaps35768.1;Parent=Thaps35768;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 1019202 1020728 . - . ID=Thaps41632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7E4];external_name=Thaps41632;logic_name=jgi_thaps3 chr8 ensembl transcript 1019202 1020728 . - . ID=Thaps41632;Parent=Thaps41632;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1019202 1019357 . - 0 ID=Thaps41632;Parent=Thaps41632;rank=4 chr8 . exon 1019202 1019357 . - . ID=Thaps41632.4;Parent=Thaps41632;constitutive=1;rank=4 chr8 . CDS 1019460 1019625 . - 0 ID=Thaps41632;Parent=Thaps41632;rank=3 chr8 . exon 1019460 1019625 . - . ID=Thaps41632.3;Parent=Thaps41632;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 1019709 1020344 . - 0 ID=Thaps41632;Parent=Thaps41632;rank=2 chr8 . exon 1019709 1020344 . - . ID=Thaps41632.2;Parent=Thaps41632;constitutive=1;rank=2 chr8 . CDS 1020454 1020728 . - 0 ID=Thaps41632;Parent=Thaps41632;rank=1 chr8 . exon 1020454 1020728 . - . ID=Thaps41632.1;Parent=Thaps41632;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 1024838 1026325 . - . ID=Thaps41636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7E7];external_name=Thaps41636;logic_name=jgi_thaps3 chr8 ensembl transcript 1024838 1026325 . - . ID=Thaps41636;Parent=Thaps41636;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1024838 1025040 . - 0 ID=Thaps41636;Parent=Thaps41636;rank=3 chr8 . exon 1024838 1025040 . - . ID=Thaps41636.3;Parent=Thaps41636;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1025092 1025454 . - 0 ID=Thaps41636;Parent=Thaps41636;rank=2 chr8 . exon 1025092 1025454 . - . ID=Thaps41636.2;Parent=Thaps41636;constitutive=1;rank=2 chr8 . CDS 1025560 1026325 . - 0 ID=Thaps41636;Parent=Thaps41636;rank=1 chr8 . exon 1025560 1026325 . - . ID=Thaps41636.1;Parent=Thaps41636;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1031638 1033223 . - . ID=Thaps23848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7F0];external_name=Thaps23848;logic_name=jgi_thaps3 chr8 ensembl transcript 1031638 1033223 . - . ID=Thaps23848;Parent=Thaps23848;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1031638 1032642 . - 0 ID=Thaps23848;Parent=Thaps23848;rank=3 chr8 . exon 1031638 1032642 . - . ID=Thaps23848.3;Parent=Thaps23848;constitutive=1;rank=3 chr8 . CDS 1032830 1033036 . - 0 ID=Thaps23848;Parent=Thaps23848;rank=2 chr8 . exon 1032830 1033036 . - . ID=Thaps23848.2;Parent=Thaps23848;constitutive=1;rank=2 chr8 . CDS 1033149 1033223 . - 0 ID=Thaps23848;Parent=Thaps23848;rank=1 chr8 . exon 1033149 1033223 . - . ID=Thaps23848.1;Parent=Thaps23848;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1036304 1038373 . - . ID=Thaps23850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7F2];external_name=Thaps23850;logic_name=jgi_thaps3 chr8 ensembl transcript 1036304 1038373 . - . ID=Thaps23850;Parent=Thaps23850;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1036304 1038373 . - 0 ID=Thaps23850;Parent=Thaps23850;rank=1 chr8 . exon 1036304 1038373 . - . ID=Thaps23850.1;Parent=Thaps23850;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1028210 1030226 . - . ID=Thaps35878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7E9];external_name=Thaps35878;logic_name=jgi_thaps3 chr8 ensembl transcript 1028210 1030226 . - . ID=Thaps35878;Parent=Thaps35878;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1028210 1028486 . - 0 ID=Thaps35878;Parent=Thaps35878;rank=3 chr8 . exon 1028210 1028486 . - . ID=Thaps35878.3;Parent=Thaps35878;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 1028604 1029738 . - 0 ID=Thaps35878;Parent=Thaps35878;rank=2 chr8 . exon 1028604 1029738 . - . ID=Thaps35878.2;Parent=Thaps35878;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1029818 1030226 . - 0 ID=Thaps35878;Parent=Thaps35878;rank=1 chr8 . exon 1029818 1030226 . - . ID=Thaps35878.1;Parent=Thaps35878;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1034523 1036051 . + . ID=Thaps7752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7F1];external_name=Thaps7752;logic_name=jgi_thaps3 chr8 ensembl transcript 1034523 1036051 . + . ID=Thaps7752;Parent=Thaps7752;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1034523 1035459 . + 0 ID=Thaps7752;Parent=Thaps7752;rank=1 chr8 . exon 1034523 1035459 . + . ID=Thaps7752.1;Parent=Thaps7752;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1035580 1035599 . + 0 ID=Thaps7752;Parent=Thaps7752;rank=2 chr8 . exon 1035580 1035599 . + . ID=Thaps7752.2;Parent=Thaps7752;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1035695 1036051 . + 0 ID=Thaps7752;Parent=Thaps7752;rank=3 chr8 . exon 1035695 1036051 . + . ID=Thaps7752.3;Parent=Thaps7752;constitutive=1;rank=3 chr8 . repeat_region 1038728 1038751 . ? . description=dust chr8 . repeat_region 1043104 1043111 . ? . description=dust chr8 . repeat_region 1044899 1044926 . ? . description=trf chr8 ensembl protein_coding_gene 1039953 1041168 . + . ID=Thaps23851;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7F3];external_name=Thaps23851;logic_name=jgi_thaps3 chr8 ensembl transcript 1039953 1041168 . + . ID=Thaps23851;Parent=Thaps23851;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1039953 1040355 . + 0 ID=Thaps23851;Parent=Thaps23851;rank=1 chr8 . exon 1039953 1040355 . + . ID=Thaps23851.1;Parent=Thaps23851;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1040444 1040657 . + 0 ID=Thaps23851;Parent=Thaps23851;rank=2 chr8 . exon 1040444 1040657 . + . ID=Thaps23851.2;Parent=Thaps23851;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1040736 1041168 . + 0 ID=Thaps23851;Parent=Thaps23851;rank=3 chr8 . exon 1040736 1041168 . + . ID=Thaps23851.3;Parent=Thaps23851;constitutive=1;ensembl_end_phase=1;rank=3 chr8 ensembl protein_coding_gene 1042067 1042858 . - . ID=Thaps263451;biotype=protein_coding;description=Probable trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C7F4];external_name=Thaps263451;logic_name=jgi_thaps3 chr8 ensembl transcript 1042067 1042858 . - . ID=Thaps263451;Parent=Thaps263451;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1042067 1042260 . - 0 ID=Thaps263451;Parent=Thaps263451;rank=3 chr8 . exon 1042067 1042260 . - . ID=Thaps263451.3;Parent=Thaps263451;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1042306 1042703 . - 0 ID=Thaps263451;Parent=Thaps263451;rank=2 chr8 . exon 1042306 1042703 . - . ID=Thaps263451.2;Parent=Thaps263451;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1042795 1042858 . - 0 ID=Thaps263451;Parent=Thaps263451;rank=1 chr8 . exon 1042795 1042858 . - . ID=Thaps263451.1;Parent=Thaps263451;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1045275 1046200 . + . ID=Thaps263452;biotype=protein_coding;description=Trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C7F6];external_name=Thaps263452;logic_name=jgi_thaps3 chr8 ensembl transcript 1045275 1046200 . + . ID=Thaps263452;Parent=Thaps263452;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1045275 1045308 . + 0 ID=Thaps263452;Parent=Thaps263452;rank=1 chr8 . exon 1045275 1045308 . + . ID=Thaps263452.1;Parent=Thaps263452;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1045500 1045943 . + 0 ID=Thaps263452;Parent=Thaps263452;rank=2 chr8 . exon 1045500 1045943 . + . ID=Thaps263452.2;Parent=Thaps263452;constitutive=1;rank=2 chr8 . CDS 1045965 1046200 . + 0 ID=Thaps263452;Parent=Thaps263452;rank=3 chr8 . exon 1045965 1046200 . + . ID=Thaps263452.3;Parent=Thaps263452;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 1043512 1044231 . - . ID=Thaps35916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7F5];external_name=Thaps35916;logic_name=jgi_thaps3 chr8 ensembl transcript 1043512 1044231 . - . ID=Thaps35916;Parent=Thaps35916;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1043512 1043835 . - 0 ID=Thaps35916;Parent=Thaps35916;rank=2 chr8 . exon 1043512 1043835 . - . ID=Thaps35916.2;Parent=Thaps35916;constitutive=1;rank=2 chr8 . CDS 1043914 1044231 . - 0 ID=Thaps35916;Parent=Thaps35916;rank=1 chr8 . exon 1043914 1044231 . - . ID=Thaps35916.1;Parent=Thaps35916;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1053249 1053940 . - . ID=Thaps23855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7F9];external_name=Thaps23855;logic_name=jgi_thaps3 chr8 ensembl transcript 1053249 1053940 . - . ID=Thaps23855;Parent=Thaps23855;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1053249 1053284 . - 0 ID=Thaps23855;Parent=Thaps23855;rank=4 chr8 . exon 1053249 1053284 . - . ID=Thaps23855.4;Parent=Thaps23855;constitutive=1;rank=4 chr8 . CDS 1053385 1053464 . - 0 ID=Thaps23855;Parent=Thaps23855;rank=3 chr8 . exon 1053385 1053464 . - . ID=Thaps23855.3;Parent=Thaps23855;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1053574 1053672 . - 0 ID=Thaps23855;Parent=Thaps23855;rank=2 chr8 . exon 1053574 1053672 . - . ID=Thaps23855.2;Parent=Thaps23855;constitutive=1;rank=2 chr8 . CDS 1053808 1053940 . - 0 ID=Thaps23855;Parent=Thaps23855;rank=1 chr8 . exon 1053808 1053940 . - . ID=Thaps23855.1;Parent=Thaps23855;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1054571 1060195 . + . ID=Thaps23856;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G0];external_name=Thaps23856;logic_name=jgi_thaps3 chr8 ensembl transcript 1054571 1060195 . + . ID=Thaps23856;Parent=Thaps23856;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1054571 1054769 . + 0 ID=Thaps23856;Parent=Thaps23856;rank=1 chr8 . exon 1054571 1054769 . + . ID=Thaps23856.1;Parent=Thaps23856;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1054876 1057104 . + 0 ID=Thaps23856;Parent=Thaps23856;rank=2 chr8 . exon 1054876 1057104 . + . ID=Thaps23856.2;Parent=Thaps23856;constitutive=1;rank=2 chr8 . CDS 1057185 1057497 . + 0 ID=Thaps23856;Parent=Thaps23856;rank=3 chr8 . exon 1057185 1057497 . + . ID=Thaps23856.3;Parent=Thaps23856;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 1057583 1058165 . + 0 ID=Thaps23856;Parent=Thaps23856;rank=4 chr8 . exon 1057583 1058165 . + . ID=Thaps23856.4;Parent=Thaps23856;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 1058256 1058799 . + 0 ID=Thaps23856;Parent=Thaps23856;rank=5 chr8 . CDS 1058899 1059060 . + 0 ID=Thaps23856;Parent=Thaps23856;rank=6 chr8 . CDS 1059141 1060004 . + 0 ID=Thaps23856;Parent=Thaps23856;rank=7 chr8 . CDS 1060077 1060195 . + 0 ID=Thaps23856;Parent=Thaps23856;rank=8 chr8 ensembl protein_coding_gene 1050671 1051783 . - . ID=Thaps263454;biotype=protein_coding;description=Trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C7F8];external_name=Thaps263454;logic_name=jgi_thaps3 chr8 ensembl transcript 1050671 1051783 . - . ID=Thaps263454;Parent=Thaps263454;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1050671 1050772 . - 0 ID=Thaps263454;Parent=Thaps263454;rank=4 chr8 . exon 1050671 1050772 . - . ID=Thaps263454.4;Parent=Thaps263454;constitutive=1;rank=4 chr8 . CDS 1050866 1050919 . - 0 ID=Thaps263454;Parent=Thaps263454;rank=3 chr8 . exon 1050866 1050919 . - . ID=Thaps263454.3;Parent=Thaps263454;constitutive=1;rank=3 chr8 . CDS 1050999 1051564 . - 0 ID=Thaps263454;Parent=Thaps263454;rank=2 chr8 . exon 1050999 1051564 . - . ID=Thaps263454.2;Parent=Thaps263454;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1051667 1051783 . - 0 ID=Thaps263454;Parent=Thaps263454;rank=1 chr8 . exon 1051667 1051783 . - . ID=Thaps263454.1;Parent=Thaps263454;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1047874 1049505 . + . ID=Thaps269386;biotype=protein_coding;description=Trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C7F7];external_name=Thaps269386;logic_name=jgi_thaps3 chr8 ensembl transcript 1047874 1049505 . + . ID=Thaps269386;Parent=Thaps269386;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1047874 1048081 . + 0 ID=Thaps269386;Parent=Thaps269386;rank=1 chr8 . exon 1047874 1048081 . + . ID=Thaps269386.1;Parent=Thaps269386;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1048174 1048665 . + 0 ID=Thaps269386;Parent=Thaps269386;rank=2 chr8 . exon 1048174 1048665 . + . ID=Thaps269386.2;Parent=Thaps269386;constitutive=1;rank=2 chr8 . CDS 1048751 1048918 . + 0 ID=Thaps269386;Parent=Thaps269386;rank=3 chr8 . exon 1048751 1048918 . + . ID=Thaps269386.3;Parent=Thaps269386;constitutive=1;rank=3 chr8 . CDS 1048991 1049505 . + 0 ID=Thaps269386;Parent=Thaps269386;rank=4 chr8 . exon 1048991 1049505 . + . ID=Thaps269386.4;Parent=Thaps269386;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . repeat_region 1061186 1061244 . ? . description=dust chr8 . repeat_region 1061691 1061711 . ? . description=trf chr8 . repeat_region 1061691 1061711 . ? . description=dust chr8 . repeat_region 1061922 1061984 . ? . description=dust chr8 . exon 1058256 1058799 . + . ID=Thaps23856.5;Parent=Thaps23856;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . exon 1058899 1059060 . + . ID=Thaps23856.6;Parent=Thaps23856;constitutive=1;rank=6 chr8 . exon 1059141 1060004 . + . ID=Thaps23856.7;Parent=Thaps23856;constitutive=1;rank=7 chr8 . exon 1060077 1060195 . + . ID=Thaps23856.8;Parent=Thaps23856;constitutive=1;ensembl_end_phase=2;rank=8 chr8 ensembl protein_coding_gene 1060472 1062443 . - . ID=Thaps23857;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G1];external_name=Thaps23857;logic_name=jgi_thaps3 chr8 ensembl transcript 1060472 1062443 . - . ID=Thaps23857;Parent=Thaps23857;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1060472 1061068 . - 0 ID=Thaps23857;Parent=Thaps23857;rank=3 chr8 . exon 1060472 1061068 . - . ID=Thaps23857.3;Parent=Thaps23857;constitutive=1;rank=3 chr8 . CDS 1061159 1062310 . - 0 ID=Thaps23857;Parent=Thaps23857;rank=2 chr8 . exon 1061159 1062310 . - . ID=Thaps23857.2;Parent=Thaps23857;constitutive=1;rank=2 chr8 . CDS 1062390 1062443 . - 0 ID=Thaps23857;Parent=Thaps23857;rank=1 chr8 . exon 1062390 1062443 . - . ID=Thaps23857.1;Parent=Thaps23857;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1063986 1066082 . - . ID=Thaps23858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G2];external_name=Thaps23858;logic_name=jgi_thaps3 chr8 ensembl transcript 1063986 1066082 . - . ID=Thaps23858;Parent=Thaps23858;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1063986 1064740 . - 0 ID=Thaps23858;Parent=Thaps23858;rank=7 chr8 . exon 1063986 1064740 . - . ID=Thaps23858.7;Parent=Thaps23858;constitutive=1;ensembl_end_phase=2;rank=7 chr8 . CDS 1064816 1065059 . - 0 ID=Thaps23858;Parent=Thaps23858;rank=6 chr8 . exon 1064816 1065059 . - . ID=Thaps23858.6;Parent=Thaps23858;constitutive=1;ensembl_end_phase=1;rank=6 chr8 . CDS 1065163 1065222 . - 0 ID=Thaps23858;Parent=Thaps23858;rank=5 chr8 . exon 1065163 1065222 . - . ID=Thaps23858.5;Parent=Thaps23858;constitutive=1;rank=5 chr8 . CDS 1065320 1065385 . - 0 ID=Thaps23858;Parent=Thaps23858;rank=4 chr8 . exon 1065320 1065385 . - . ID=Thaps23858.4;Parent=Thaps23858;constitutive=1;rank=4 chr8 . CDS 1065481 1065728 . - 0 ID=Thaps23858;Parent=Thaps23858;rank=3 chr8 . exon 1065481 1065728 . - . ID=Thaps23858.3;Parent=Thaps23858;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1065787 1065845 . - 0 ID=Thaps23858;Parent=Thaps23858;rank=2 chr8 . exon 1065787 1065845 . - . ID=Thaps23858.2;Parent=Thaps23858;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1066003 1066082 . - 0 ID=Thaps23858;Parent=Thaps23858;rank=1 chr8 . exon 1066003 1066082 . - . ID=Thaps23858.1;Parent=Thaps23858;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 1068648 1069922 . - . ID=Thaps23860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G3];external_name=Thaps23860;logic_name=jgi_thaps3 chr8 ensembl transcript 1068648 1069922 . - . ID=Thaps23860;Parent=Thaps23860;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1068648 1069922 . - 0 ID=Thaps23860;Parent=Thaps23860;rank=1 chr8 . exon 1068648 1069922 . - . ID=Thaps23860.1;Parent=Thaps23860;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1071042 1071686 . - . ID=Thaps23861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G4];external_name=Thaps23861;logic_name=jgi_thaps3 chr8 ensembl transcript 1071042 1071686 . - . ID=Thaps23861;Parent=Thaps23861;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1071042 1071686 . - 0 ID=Thaps23861;Parent=Thaps23861;rank=1 chr8 . exon 1071042 1071686 . - . ID=Thaps23861.1;Parent=Thaps23861;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1072020 1074857 . - . ID=Thaps23862;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G5];external_name=Thaps23862;logic_name=jgi_thaps3 chr8 ensembl transcript 1072020 1074857 . - . ID=Thaps23862;Parent=Thaps23862;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1072020 1074857 . - 0 ID=Thaps23862;Parent=Thaps23862;rank=1 chr8 . exon 1072020 1074857 . - . ID=Thaps23862.1;Parent=Thaps23862;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1075481 1076167 . - . ID=Thaps7767;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G6];external_name=Thaps7767;logic_name=jgi_thaps3 chr8 ensembl transcript 1075481 1076167 . - . ID=Thaps7767;Parent=Thaps7767;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1075481 1075677 . - 0 ID=Thaps7767;Parent=Thaps7767;rank=4 chr8 . exon 1075481 1075677 . - . ID=Thaps7767.4;Parent=Thaps7767;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 1075761 1075780 . - 0 ID=Thaps7767;Parent=Thaps7767;rank=3 chr8 . exon 1075761 1075780 . - . ID=Thaps7767.3;Parent=Thaps7767;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1075831 1075993 . - 0 ID=Thaps7767;Parent=Thaps7767;rank=2 chr8 . exon 1075831 1075993 . - . ID=Thaps7767.2;Parent=Thaps7767;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1076053 1076167 . - 0 ID=Thaps7767;Parent=Thaps7767;rank=1 chr8 . exon 1076053 1076167 . - . ID=Thaps7767.1;Parent=Thaps7767;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1076848 1077381 . + . ID=Thaps7768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G7];external_name=Thaps7768;logic_name=jgi_thaps3 chr8 ensembl transcript 1076848 1077381 . + . ID=Thaps7768;Parent=Thaps7768;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1076848 1077381 . + 0 ID=Thaps7768;Parent=Thaps7768;rank=1 chr8 . exon 1076848 1077381 . + . ID=Thaps7768.1;Parent=Thaps7768;constitutive=1;rank=1 chr8 . repeat_region 1078241 1078383 . ? . description=trf chr8 . repeat_region 1085204 1085266 . ? . description=dust chr8 . repeat_region 1085236 1085263 . ? . description=trf chr8 . repeat_region 1085236 1085266 . ? . description=trf chr8 . repeat_region 1086955 1086973 . ? . description=dust chr8 . repeat_region 1087421 1087467 . ? . description=trf chr8 ensembl protein_coding_gene 1082784 1083122 . - . ID=Thaps17952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G9];external_name=Thaps17952;logic_name=jgi_thaps3 chr8 ensembl transcript 1082784 1083122 . - . ID=Thaps17952;Parent=Thaps17952;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1082784 1083122 . - 0 ID=Thaps17952;Parent=Thaps17952;rank=1 chr8 . exon 1082784 1083122 . - . ID=Thaps17952.1;Parent=Thaps17952;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1079370 1081261 . + . ID=Thaps41637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7G8];external_name=Thaps41637;logic_name=jgi_thaps3 chr8 ensembl transcript 1079370 1081261 . + . ID=Thaps41637;Parent=Thaps41637;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1079370 1079428 . + 0 ID=Thaps41637;Parent=Thaps41637;rank=1 chr8 . exon 1079370 1079428 . + . ID=Thaps41637.1;Parent=Thaps41637;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 1079576 1079705 . + 0 ID=Thaps41637;Parent=Thaps41637;rank=2 chr8 . exon 1079576 1079705 . + . ID=Thaps41637.2;Parent=Thaps41637;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1079848 1080078 . + 0 ID=Thaps41637;Parent=Thaps41637;rank=3 chr8 . exon 1079848 1080078 . + . ID=Thaps41637.3;Parent=Thaps41637;constitutive=1;rank=3 chr8 . CDS 1080197 1080617 . + 0 ID=Thaps41637;Parent=Thaps41637;rank=4 chr8 . exon 1080197 1080617 . + . ID=Thaps41637.4;Parent=Thaps41637;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 1080756 1081261 . + 0 ID=Thaps41637;Parent=Thaps41637;rank=5 chr8 . exon 1080756 1081261 . + . ID=Thaps41637.5;Parent=Thaps41637;constitutive=1;ensembl_end_phase=2;rank=5 chr8 ensembl protein_coding_gene 1094835 1096582 . + . ID=Thaps23865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7H1];external_name=Thaps23865;logic_name=jgi_thaps3 chr8 ensembl transcript 1094835 1096582 . + . ID=Thaps23865;Parent=Thaps23865;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1094835 1096489 . + 0 ID=Thaps23865;Parent=Thaps23865;rank=1 chr8 . exon 1094835 1096489 . + . ID=Thaps23865.1;Parent=Thaps23865;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 1096543 1096582 . + 0 ID=Thaps23865;Parent=Thaps23865;rank=2 chr8 . exon 1096543 1096582 . + . ID=Thaps23865.2;Parent=Thaps23865;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 1097540 1100068 . - . ID=Thaps23867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7H3];external_name=Thaps23867;logic_name=jgi_thaps3 chr8 ensembl transcript 1097540 1100068 . - . ID=Thaps23867;Parent=Thaps23867;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1097540 1097567 . - 0 ID=Thaps23867;Parent=Thaps23867;rank=7 chr8 . exon 1097540 1097567 . - . ID=Thaps23867.7;Parent=Thaps23867;constitutive=1;ensembl_end_phase=1;rank=7 chr8 . CDS 1097602 1098205 . - 0 ID=Thaps23867;Parent=Thaps23867;rank=6 chr8 . CDS 1098289 1098675 . - 0 ID=Thaps23867;Parent=Thaps23867;rank=5 chr8 . CDS 1098770 1099048 . - 0 ID=Thaps23867;Parent=Thaps23867;rank=4 chr8 . CDS 1099140 1099341 . - 0 ID=Thaps23867;Parent=Thaps23867;rank=3 chr8 . CDS 1099437 1099510 . - 0 ID=Thaps23867;Parent=Thaps23867;rank=2 chr8 . CDS 1100014 1100068 . - 0 ID=Thaps23867;Parent=Thaps23867;rank=1 chr8 ensembl protein_coding_gene 1096779 1097384 . + . ID=Thaps35963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7H2];external_name=Thaps35963;logic_name=jgi_thaps3 chr8 ensembl transcript 1096779 1097384 . + . ID=Thaps35963;Parent=Thaps35963;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1096779 1097384 . + 0 ID=Thaps35963;Parent=Thaps35963;rank=1 chr8 . exon 1096779 1097384 . + . ID=Thaps35963.1;Parent=Thaps35963;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1090403 1094335 . + . ID=Thaps7771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7H0];external_name=Thaps7771;logic_name=jgi_thaps3 chr8 ensembl transcript 1090403 1094335 . + . ID=Thaps7771;Parent=Thaps7771;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1090403 1094335 . + 0 ID=Thaps7771;Parent=Thaps7771;rank=1 chr8 . exon 1090403 1094335 . + . ID=Thaps7771.1;Parent=Thaps7771;constitutive=1;rank=1 chr8 . repeat_region 1100503 1100563 . ? . description=dust chr8 . repeat_region 1106113 1106136 . ? . description=dust chr8 . repeat_region 1106116 1106136 . ? . description=trf chr8 . repeat_region 1107209 1107232 . ? . description=trf chr8 . exon 1097602 1098205 . - . ID=Thaps23867.6;Parent=Thaps23867;constitutive=1;ensembl_end_phase=1;rank=6 chr8 . exon 1098289 1098675 . - . ID=Thaps23867.5;Parent=Thaps23867;constitutive=1;rank=5 chr8 . exon 1098770 1099048 . - . ID=Thaps23867.4;Parent=Thaps23867;constitutive=1;rank=4 chr8 . exon 1099140 1099341 . - . ID=Thaps23867.3;Parent=Thaps23867;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . exon 1099437 1099510 . - . ID=Thaps23867.2;Parent=Thaps23867;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . exon 1100014 1100068 . - . ID=Thaps23867.1;Parent=Thaps23867;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1104236 1105067 . + . ID=Thaps263456;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7H6];external_name=Thaps263456;logic_name=jgi_thaps3 chr8 ensembl transcript 1104236 1105067 . + . ID=Thaps263456;Parent=Thaps263456;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1104236 1104502 . + 0 ID=Thaps263456;Parent=Thaps263456;rank=1 chr8 . exon 1104236 1104502 . + . ID=Thaps263456.1;Parent=Thaps263456;constitutive=1;rank=1 chr8 . CDS 1104573 1104623 . + 0 ID=Thaps263456;Parent=Thaps263456;rank=2 chr8 . exon 1104573 1104623 . + . ID=Thaps263456.2;Parent=Thaps263456;constitutive=1;rank=2 chr8 . CDS 1104635 1104801 . + 0 ID=Thaps263456;Parent=Thaps263456;rank=3 chr8 . exon 1104635 1104801 . + . ID=Thaps263456.3;Parent=Thaps263456;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1104923 1105067 . + 0 ID=Thaps263456;Parent=Thaps263456;rank=4 chr8 . exon 1104923 1105067 . + . ID=Thaps263456.4;Parent=Thaps263456;constitutive=1;ensembl_end_phase=1;rank=4 chr8 ensembl protein_coding_gene 1106964 1111086 . + . ID=Thaps269387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7H8];external_name=Thaps269387;logic_name=jgi_thaps3 chr8 ensembl transcript 1106964 1111086 . + . ID=Thaps269387;Parent=Thaps269387;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1106964 1107951 . + 0 ID=Thaps269387;Parent=Thaps269387;rank=1 chr8 . exon 1106964 1107951 . + . ID=Thaps269387.1;Parent=Thaps269387;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1110707 1111086 . + 0 ID=Thaps269387;Parent=Thaps269387;rank=2 chr8 ensembl protein_coding_gene 1100661 1102441 . + . ID=Thaps7775;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7H4];external_name=Thaps7775;logic_name=jgi_thaps3 chr8 ensembl transcript 1100661 1102441 . + . ID=Thaps7775;Parent=Thaps7775;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1100661 1102063 . + 0 ID=Thaps7775;Parent=Thaps7775;rank=1 chr8 . exon 1100661 1102063 . + . ID=Thaps7775.1;Parent=Thaps7775;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 1102156 1102441 . + 0 ID=Thaps7775;Parent=Thaps7775;rank=2 chr8 . exon 1102156 1102441 . + . ID=Thaps7775.2;Parent=Thaps7775;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 1102630 1103698 . - . ID=Thaps7776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7H5];external_name=Thaps7776;logic_name=jgi_thaps3 chr8 ensembl transcript 1102630 1103698 . - . ID=Thaps7776;Parent=Thaps7776;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1102630 1102660 . - 0 ID=Thaps7776;Parent=Thaps7776;rank=5 chr8 . exon 1102630 1102660 . - . ID=Thaps7776.5;Parent=Thaps7776;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 1102747 1102823 . - 0 ID=Thaps7776;Parent=Thaps7776;rank=4 chr8 . exon 1102747 1102823 . - . ID=Thaps7776.4;Parent=Thaps7776;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 1102921 1103270 . - 0 ID=Thaps7776;Parent=Thaps7776;rank=3 chr8 . exon 1102921 1103270 . - . ID=Thaps7776.3;Parent=Thaps7776;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1103353 1103490 . - 0 ID=Thaps7776;Parent=Thaps7776;rank=2 chr8 . exon 1103353 1103490 . - . ID=Thaps7776.2;Parent=Thaps7776;constitutive=1;rank=2 chr8 . CDS 1103584 1103698 . - 0 ID=Thaps7776;Parent=Thaps7776;rank=1 chr8 . exon 1103584 1103698 . - . ID=Thaps7776.1;Parent=Thaps7776;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1105227 1106111 . - . ID=Thaps7778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7H7];external_name=Thaps7778;logic_name=jgi_thaps3 chr8 ensembl transcript 1105227 1106111 . - . ID=Thaps7778;Parent=Thaps7778;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1105227 1106111 . - 0 ID=Thaps7778;Parent=Thaps7778;rank=1 chr8 . exon 1105227 1106111 . - . ID=Thaps7778.1;Parent=Thaps7778;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1114758 1116128 . + . ID=Thaps263459;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7I0];external_name=Thaps263459;logic_name=jgi_thaps3 chr8 ensembl transcript 1114758 1116128 . + . ID=Thaps263459;Parent=Thaps263459;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1114758 1115398 . + 0 ID=Thaps263459;Parent=Thaps263459;rank=1 chr8 . exon 1114758 1115398 . + . ID=Thaps263459.1;Parent=Thaps263459;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 1115424 1115438 . + 0 ID=Thaps263459;Parent=Thaps263459;rank=2 chr8 . exon 1115424 1115438 . + . ID=Thaps263459.2;Parent=Thaps263459;constitutive=1;rank=2 chr8 . CDS 1115708 1116128 . + 0 ID=Thaps263459;Parent=Thaps263459;rank=3 chr8 . exon 1115708 1116128 . + . ID=Thaps263459.3;Parent=Thaps263459;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . exon 1110707 1111086 . + . ID=Thaps269387.2;Parent=Thaps269387;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 1112147 1113566 . + . ID=Thaps29244;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8C7H9];external_name=Thaps29244;logic_name=jgi_thaps3 chr8 ensembl transcript 1112147 1113566 . + . ID=Thaps29244;Parent=Thaps29244;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1112147 1112208 . + 0 ID=Thaps29244;Parent=Thaps29244;rank=1 chr8 . exon 1112147 1112208 . + . ID=Thaps29244.1;Parent=Thaps29244;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 1112422 1112461 . + 0 ID=Thaps29244;Parent=Thaps29244;rank=2 chr8 . exon 1112422 1112461 . + . ID=Thaps29244.2;Parent=Thaps29244;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1112556 1112632 . + 0 ID=Thaps29244;Parent=Thaps29244;rank=3 chr8 . exon 1112556 1112632 . + . ID=Thaps29244.3;Parent=Thaps29244;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1112745 1112827 . + 0 ID=Thaps29244;Parent=Thaps29244;rank=4 chr8 . exon 1112745 1112827 . + . ID=Thaps29244.4;Parent=Thaps29244;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 1112942 1112965 . + 0 ID=Thaps29244;Parent=Thaps29244;rank=5 chr8 . exon 1112942 1112965 . + . ID=Thaps29244.5;Parent=Thaps29244;constitutive=1;rank=5 chr8 . CDS 1113063 1113190 . + 0 ID=Thaps29244;Parent=Thaps29244;rank=6 chr8 . exon 1113063 1113190 . + . ID=Thaps29244.6;Parent=Thaps29244;constitutive=1;ensembl_end_phase=2;rank=6 chr8 . CDS 1113301 1113349 . + 0 ID=Thaps29244;Parent=Thaps29244;rank=7 chr8 . exon 1113301 1113349 . + . ID=Thaps29244.7;Parent=Thaps29244;constitutive=1;ensembl_end_phase=1;rank=7 chr8 . CDS 1113442 1113566 . + 0 ID=Thaps29244;Parent=Thaps29244;rank=8 chr8 . exon 1113442 1113566 . + . ID=Thaps29244.8;Parent=Thaps29244;constitutive=1;ensembl_end_phase=2;rank=8 chr8 ensembl protein_coding_gene 1118761 1119852 . - . ID=Thaps23872;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7I1];external_name=Thaps23872;logic_name=jgi_thaps3 chr8 ensembl transcript 1118761 1119852 . - . ID=Thaps23872;Parent=Thaps23872;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1118761 1119852 . - 0 ID=Thaps23872;Parent=Thaps23872;rank=1 chr8 . exon 1118761 1119852 . - . ID=Thaps23872.1;Parent=Thaps23872;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1120639 1121178 . - . ID=Thaps263460;biotype=protein_coding;description=Elongation factor kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C7I2];external_name=Thaps263460;logic_name=jgi_thaps3 chr8 ensembl transcript 1120639 1121178 . - . ID=Thaps263460;Parent=Thaps263460;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1120639 1120922 . - 0 ID=Thaps263460;Parent=Thaps263460;rank=3 chr8 . exon 1120639 1120922 . - . ID=Thaps263460.3;Parent=Thaps263460;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1120971 1121004 . - 0 ID=Thaps263460;Parent=Thaps263460;rank=2 chr8 . exon 1120971 1121004 . - . ID=Thaps263460.2;Parent=Thaps263460;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1121116 1121178 . - 0 ID=Thaps263460;Parent=Thaps263460;rank=1 chr8 . exon 1121116 1121178 . - . ID=Thaps263460.1;Parent=Thaps263460;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1124699 1125508 . + . ID=Thaps263461;biotype=protein_coding;description=Methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C7I4];external_name=Thaps263461;logic_name=jgi_thaps3 chr8 ensembl transcript 1124699 1125508 . + . ID=Thaps263461;Parent=Thaps263461;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1124699 1124744 . + 0 ID=Thaps263461;Parent=Thaps263461;rank=1 chr8 . exon 1124699 1124744 . + . ID=Thaps263461.1;Parent=Thaps263461;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1124814 1125311 . + 0 ID=Thaps263461;Parent=Thaps263461;rank=2 chr8 . exon 1124814 1125311 . + . ID=Thaps263461.2;Parent=Thaps263461;constitutive=1;rank=2 chr8 . CDS 1125345 1125508 . + 0 ID=Thaps263461;Parent=Thaps263461;rank=3 chr8 . exon 1125345 1125508 . + . ID=Thaps263461.3;Parent=Thaps263461;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 1122889 1123638 . + . ID=Thaps7786;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7I3];external_name=Thaps7786;logic_name=jgi_thaps3 chr8 ensembl transcript 1122889 1123638 . + . ID=Thaps7786;Parent=Thaps7786;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1122889 1123638 . + 0 ID=Thaps7786;Parent=Thaps7786;rank=1 chr8 . exon 1122889 1123638 . + . ID=Thaps7786.1;Parent=Thaps7786;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1125690 1128788 . - . ID=Thaps7788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7I5];external_name=Thaps7788;logic_name=jgi_thaps3 chr8 ensembl transcript 1125690 1128788 . - . ID=Thaps7788;Parent=Thaps7788;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1125690 1128788 . - 0 ID=Thaps7788;Parent=Thaps7788;rank=1 chr8 . exon 1125690 1128788 . - . ID=Thaps7788.1;Parent=Thaps7788;constitutive=1;rank=1 chr8 . repeat_region 1133469 1133492 . ? . description=trf chr8 . repeat_region 1133469 1133492 . ? . description=dust chr8 . repeat_region 1134082 1134100 . ? . description=dust chr8 . repeat_region 1135413 1135880 . + . description=Harbinger3_TP chr8 . repeat_region 1135852 1135924 . ? . description=dust chr8 . repeat_region 1135860 1135924 . ? . description=trf chr8 . repeat_region 1135969 1136433 . + . description=Harbinger3_TP chr8 ensembl protein_coding_gene 1137384 1139273 . - . ID=Thaps23875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7I9];external_name=Thaps23875;logic_name=jgi_thaps3 chr8 ensembl transcript 1137384 1139273 . - . ID=Thaps23875;Parent=Thaps23875;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1137384 1139273 . - 0 ID=Thaps23875;Parent=Thaps23875;rank=1 chr8 . exon 1137384 1139273 . - . ID=Thaps23875.1;Parent=Thaps23875;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1129203 1130174 . + . ID=Thaps7789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7I6];external_name=Thaps7789;logic_name=jgi_thaps3 chr8 ensembl transcript 1129203 1130174 . + . ID=Thaps7789;Parent=Thaps7789;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1129203 1130174 . + 0 ID=Thaps7789;Parent=Thaps7789;rank=1 chr8 . exon 1129203 1130174 . + . ID=Thaps7789.1;Parent=Thaps7789;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1130516 1132681 . + . ID=Thaps7790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7I7];external_name=Thaps7790;logic_name=jgi_thaps3 chr8 ensembl transcript 1130516 1132681 . + . ID=Thaps7790;Parent=Thaps7790;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1130516 1130603 . + 0 ID=Thaps7790;Parent=Thaps7790;rank=1 chr8 . exon 1130516 1130603 . + . ID=Thaps7790.1;Parent=Thaps7790;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1130721 1131755 . + 0 ID=Thaps7790;Parent=Thaps7790;rank=2 chr8 . exon 1130721 1131755 . + . ID=Thaps7790.2;Parent=Thaps7790;constitutive=1;rank=2 chr8 . CDS 1131804 1132681 . + 0 ID=Thaps7790;Parent=Thaps7790;rank=3 chr8 . exon 1131804 1132681 . + . ID=Thaps7790.3;Parent=Thaps7790;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 1133588 1134971 . - . ID=Thaps7791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7I8];external_name=Thaps7791;logic_name=jgi_thaps3 chr8 ensembl transcript 1133588 1134971 . - . ID=Thaps7791;Parent=Thaps7791;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1133588 1134545 . - 0 ID=Thaps7791;Parent=Thaps7791;rank=3 chr8 . exon 1133588 1134545 . - . ID=Thaps7791.3;Parent=Thaps7791;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 1134642 1134711 . - 0 ID=Thaps7791;Parent=Thaps7791;rank=2 chr8 . exon 1134642 1134711 . - . ID=Thaps7791.2;Parent=Thaps7791;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1134782 1134971 . - 0 ID=Thaps7791;Parent=Thaps7791;rank=1 chr8 . exon 1134782 1134971 . - . ID=Thaps7791.1;Parent=Thaps7791;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . biological_region 1146166 1146170 0.999 - . logic_name=eponine chr8 ensembl protein_coding_gene 1145153 1145428 . - . ID=Thaps263463;biotype=protein_coding;description=Putative uncharacterized protein HBP1 [Source:UniProtKB/TrEMBL%3BAcc:B8C7J2];external_name=HBP1;logic_name=jgi_thaps3 chr8 ensembl transcript 1145153 1145428 . - . ID=Thaps263463;Parent=Thaps263463;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1145153 1145428 . - 0 ID=Thaps263463;Parent=Thaps263463;rank=1 chr8 . exon 1145153 1145428 . - . ID=Thaps263463.1;Parent=Thaps263463;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1140721 1142603 . + . ID=Thaps269391;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7J0];external_name=Thaps269391;logic_name=jgi_thaps3 chr8 ensembl transcript 1140721 1142603 . + . ID=Thaps269391;Parent=Thaps269391;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1140721 1140960 . + 0 ID=Thaps269391;Parent=Thaps269391;rank=1 chr8 . exon 1140721 1140960 . + . ID=Thaps269391.1;Parent=Thaps269391;constitutive=1;rank=1 chr8 . CDS 1141077 1141564 . + 0 ID=Thaps269391;Parent=Thaps269391;rank=2 chr8 . exon 1141077 1141564 . + . ID=Thaps269391.2;Parent=Thaps269391;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1141707 1141752 . + 0 ID=Thaps269391;Parent=Thaps269391;rank=3 chr8 . exon 1141707 1141752 . + . ID=Thaps269391.3;Parent=Thaps269391;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 1141905 1142603 . + 0 ID=Thaps269391;Parent=Thaps269391;rank=4 chr8 . exon 1141905 1142603 . + . ID=Thaps269391.4;Parent=Thaps269391;constitutive=1;rank=4 chr8 ensembl protein_coding_gene 1143171 1143989 . + . ID=Thaps7794;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7J1];external_name=Thaps7794;logic_name=jgi_thaps3 chr8 ensembl transcript 1143171 1143989 . + . ID=Thaps7794;Parent=Thaps7794;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1143171 1143989 . + 0 ID=Thaps7794;Parent=Thaps7794;rank=1 chr8 . exon 1143171 1143989 . + . ID=Thaps7794.1;Parent=Thaps7794;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1146524 1148941 . + . ID=Thaps7796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7J3];external_name=Thaps7796;logic_name=jgi_thaps3 chr8 ensembl transcript 1146524 1148941 . + . ID=Thaps7796;Parent=Thaps7796;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1146524 1148941 . + 0 ID=Thaps7796;Parent=Thaps7796;rank=1 chr8 . exon 1146524 1148941 . + . ID=Thaps7796.1;Parent=Thaps7796;constitutive=1;rank=1 chr8 . repeat_region 1147572 1147606 . ? . description=trf chr8 . repeat_region 1152288 1152332 . ? . description=dust chr8 ensembl protein_coding_gene 1149196 1151654 . - . ID=Thaps23878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7J4];external_name=Thaps23878;logic_name=jgi_thaps3 chr8 ensembl transcript 1149196 1151654 . - . ID=Thaps23878;Parent=Thaps23878;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1149196 1149244 . - 0 ID=Thaps23878;Parent=Thaps23878;rank=3 chr8 . exon 1149196 1149244 . - . ID=Thaps23878.3;Parent=Thaps23878;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 1149292 1151080 . - 0 ID=Thaps23878;Parent=Thaps23878;rank=2 chr8 . exon 1149292 1151080 . - . ID=Thaps23878.2;Parent=Thaps23878;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1151201 1151654 . - 0 ID=Thaps23878;Parent=Thaps23878;rank=1 chr8 . exon 1151201 1151654 . - . ID=Thaps23878.1;Parent=Thaps23878;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1155193 1156138 . + . ID=Thaps269392;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7J6];external_name=Thaps269392;logic_name=jgi_thaps3 chr8 ensembl transcript 1155193 1156138 . + . ID=Thaps269392;Parent=Thaps269392;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1155193 1155871 . + 0 ID=Thaps269392;Parent=Thaps269392;rank=1 chr8 . exon 1155193 1155871 . + . ID=Thaps269392.1;Parent=Thaps269392;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1156119 1156138 . + 0 ID=Thaps269392;Parent=Thaps269392;rank=2 chr8 . exon 1156119 1156138 . + . ID=Thaps269392.2;Parent=Thaps269392;constitutive=1;ensembl_end_phase=2;rank=2 chr8 ensembl protein_coding_gene 1156124 1157213 . - . ID=Thaps36076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7J7];external_name=Thaps36076;logic_name=jgi_thaps3 chr8 ensembl transcript 1156124 1157213 . - . ID=Thaps36076;Parent=Thaps36076;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1156124 1156568 . - 0 ID=Thaps36076;Parent=Thaps36076;rank=4 chr8 . exon 1156124 1156568 . - . ID=Thaps36076.4;Parent=Thaps36076;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 1156611 1156765 . - 0 ID=Thaps36076;Parent=Thaps36076;rank=3 chr8 . exon 1156611 1156765 . - . ID=Thaps36076.3;Parent=Thaps36076;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1156814 1156983 . - 0 ID=Thaps36076;Parent=Thaps36076;rank=2 chr8 . exon 1156814 1156983 . - . ID=Thaps36076.2;Parent=Thaps36076;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1157087 1157213 . - 0 ID=Thaps36076;Parent=Thaps36076;rank=1 chr8 . exon 1157087 1157213 . - . ID=Thaps36076.1;Parent=Thaps36076;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1152024 1153224 . + . ID=Thaps7798;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7J5];external_name=Thaps7798;logic_name=jgi_thaps3 chr8 ensembl transcript 1152024 1153224 . + . ID=Thaps7798;Parent=Thaps7798;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1152024 1152083 . + 0 ID=Thaps7798;Parent=Thaps7798;rank=1 chr8 . exon 1152024 1152083 . + . ID=Thaps7798.1;Parent=Thaps7798;constitutive=1;rank=1 chr8 . CDS 1152172 1153224 . + 0 ID=Thaps7798;Parent=Thaps7798;rank=2 chr8 . exon 1152172 1153224 . + . ID=Thaps7798.2;Parent=Thaps7798;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 1158303 1164302 . - . ID=Thaps7800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7J8];external_name=Thaps7800;logic_name=jgi_thaps3 chr8 ensembl transcript 1158303 1164302 . - . ID=Thaps7800;Parent=Thaps7800;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1158303 1158479 . - 0 ID=Thaps7800;Parent=Thaps7800;rank=7 chr8 . exon 1158303 1158479 . - . ID=Thaps7800.7;Parent=Thaps7800;constitutive=1;rank=7 chr8 . CDS 1158561 1159437 . - 0 ID=Thaps7800;Parent=Thaps7800;rank=6 chr8 . exon 1158561 1159437 . - . ID=Thaps7800.6;Parent=Thaps7800;constitutive=1;ensembl_end_phase=1;rank=6 chr8 . CDS 1159525 1159764 . - 0 ID=Thaps7800;Parent=Thaps7800;rank=5 chr8 . exon 1159525 1159764 . - . ID=Thaps7800.5;Parent=Thaps7800;constitutive=1;rank=5 chr8 . CDS 1159862 1160159 . - 0 ID=Thaps7800;Parent=Thaps7800;rank=4 chr8 . exon 1159862 1160159 . - . ID=Thaps7800.4;Parent=Thaps7800;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 1160181 1161331 . - 0 ID=Thaps7800;Parent=Thaps7800;rank=3 chr8 . exon 1160181 1161331 . - . ID=Thaps7800.3;Parent=Thaps7800;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1161433 1163993 . - 0 ID=Thaps7800;Parent=Thaps7800;rank=2 chr8 . exon 1161433 1163993 . - . ID=Thaps7800.2;Parent=Thaps7800;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1164108 1164302 . - 0 ID=Thaps7800;Parent=Thaps7800;rank=1 chr8 . exon 1164108 1164302 . - . ID=Thaps7800.1;Parent=Thaps7800;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1165159 1166547 . + . ID=Thaps7801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7J9];external_name=Thaps7801;logic_name=jgi_thaps3 chr8 ensembl transcript 1165159 1166547 . + . ID=Thaps7801;Parent=Thaps7801;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1165159 1166547 . + 0 ID=Thaps7801;Parent=Thaps7801;rank=1 chr8 . exon 1165159 1166547 . + . ID=Thaps7801.1;Parent=Thaps7801;constitutive=1;rank=1 chr8 . repeat_region 1167937 1167970 . ? . description=trf chr8 . repeat_region 1170036 1170486 . ? . description=trf chr8 . repeat_region 1171233 1171240 . ? . description=dust chr8 . repeat_region 1172284 1172329 . ? . description=trf chr8 ensembl protein_coding_gene 1172625 1175636 . + . ID=Thaps23881;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K1];external_name=Thaps23881;logic_name=jgi_thaps3 chr8 ensembl transcript 1172625 1175636 . + . ID=Thaps23881;Parent=Thaps23881;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1172625 1175636 . + 0 ID=Thaps23881;Parent=Thaps23881;rank=1 chr8 . exon 1172625 1175636 . + . ID=Thaps23881.1;Parent=Thaps23881;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1168825 1169757 . - . ID=Thaps35929;biotype=protein_coding;description=Mitogen activated protein kinase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K0];external_name=MAPKKK;logic_name=jgi_thaps3 chr8 ensembl transcript 1168825 1169757 . - . ID=Thaps35929;Parent=Thaps35929;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1168825 1169152 . - 0 ID=Thaps35929;Parent=Thaps35929;rank=2 chr8 . exon 1168825 1169152 . - . ID=Thaps35929.2;Parent=Thaps35929;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1169231 1169757 . - 0 ID=Thaps35929;Parent=Thaps35929;rank=1 chr8 . exon 1169231 1169757 . - . ID=Thaps35929.1;Parent=Thaps35929;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 1175995 1177479 . - . ID=Thaps7804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K2];external_name=Thaps7804;logic_name=jgi_thaps3 chr8 ensembl transcript 1175995 1177479 . - . ID=Thaps7804;Parent=Thaps7804;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1175995 1176402 . - 0 ID=Thaps7804;Parent=Thaps7804;rank=3 chr8 . exon 1175995 1176402 . - . ID=Thaps7804.3;Parent=Thaps7804;constitutive=1;rank=3 chr8 . CDS 1176493 1177411 . - 0 ID=Thaps7804;Parent=Thaps7804;rank=2 chr8 . exon 1176493 1177411 . - . ID=Thaps7804.2;Parent=Thaps7804;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1177436 1177479 . - 0 ID=Thaps7804;Parent=Thaps7804;rank=1 chr8 ensembl protein_coding_gene 1181885 1183953 . - . ID=Thaps269393;biotype=protein_coding;description=Sulfolipid biosynthesis protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K5];external_name=SQDB1;logic_name=jgi_thaps3 chr8 ensembl transcript 1181885 1183953 . - . ID=Thaps269393;Parent=Thaps269393;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1181885 1182931 . - 0 ID=Thaps269393;Parent=Thaps269393;rank=2 chr8 . exon 1181885 1182931 . - . ID=Thaps269393.2;Parent=Thaps269393;constitutive=1;rank=2 chr8 . CDS 1183612 1183953 . - 0 ID=Thaps269393;Parent=Thaps269393;rank=1 chr8 . exon 1183612 1183953 . - . ID=Thaps269393.1;Parent=Thaps269393;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1184528 1184851 . + . ID=Thaps36015;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K6];external_name=Thaps36015;logic_name=jgi_thaps3 chr8 ensembl transcript 1184528 1184851 . + . ID=Thaps36015;Parent=Thaps36015;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1184528 1184851 . + 0 ID=Thaps36015;Parent=Thaps36015;rank=1 chr8 . exon 1184528 1184851 . + . ID=Thaps36015.1;Parent=Thaps36015;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1184916 1186574 . - . ID=Thaps41650;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K7];external_name=Thaps41650;logic_name=jgi_thaps3 chr8 ensembl transcript 1184916 1186574 . - . ID=Thaps41650;Parent=Thaps41650;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1184916 1185935 . - 0 ID=Thaps41650;Parent=Thaps41650;rank=2 chr8 . exon 1184916 1185935 . - . ID=Thaps41650.2;Parent=Thaps41650;constitutive=1;rank=2 chr8 . CDS 1185969 1186574 . - 0 ID=Thaps41650;Parent=Thaps41650;rank=1 chr8 . exon 1185969 1186574 . - . ID=Thaps41650.1;Parent=Thaps41650;constitutive=1;rank=1 chr8 . exon 1177436 1177479 . - . ID=Thaps7804.1;Parent=Thaps7804;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 1178330 1179658 . + . ID=Thaps7805;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K3];external_name=Thaps7805;logic_name=jgi_thaps3 chr8 ensembl transcript 1178330 1179658 . + . ID=Thaps7805;Parent=Thaps7805;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1178330 1178404 . + 0 ID=Thaps7805;Parent=Thaps7805;rank=1 chr8 . exon 1178330 1178404 . + . ID=Thaps7805.1;Parent=Thaps7805;constitutive=1;rank=1 chr8 . CDS 1178558 1178648 . + 0 ID=Thaps7805;Parent=Thaps7805;rank=2 chr8 . exon 1178558 1178648 . + . ID=Thaps7805.2;Parent=Thaps7805;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1178739 1179658 . + 0 ID=Thaps7805;Parent=Thaps7805;rank=3 chr8 . exon 1178739 1179658 . + . ID=Thaps7805.3;Parent=Thaps7805;constitutive=1;ensembl_end_phase=2;rank=3 chr8 ensembl protein_coding_gene 1179988 1181319 . + . ID=Thaps7806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K4];external_name=Thaps7806;logic_name=jgi_thaps3 chr8 ensembl transcript 1179988 1181319 . + . ID=Thaps7806;Parent=Thaps7806;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1179988 1181319 . + 0 ID=Thaps7806;Parent=Thaps7806;rank=1 chr8 . exon 1179988 1181319 . + . ID=Thaps7806.1;Parent=Thaps7806;constitutive=1;rank=1 chr8 . repeat_region 1194660 1194698 . ? . description=trf chr8 . repeat_region 1194660 1194708 . ? . description=trf chr8 . repeat_region 1194660 1194708 . ? . description=trf chr8 . repeat_region 1194660 1194728 . ? . description=dust chr8 . repeat_region 1194666 1194708 . ? . description=trf chr8 ensembl protein_coding_gene 1194750 1196547 . - . ID=Thaps23886;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L0];external_name=Thaps23886;logic_name=jgi_thaps3 chr8 ensembl transcript 1194750 1196547 . - . ID=Thaps23886;Parent=Thaps23886;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1194750 1195125 . - 0 ID=Thaps23886;Parent=Thaps23886;rank=5 chr8 . exon 1194750 1195125 . - . ID=Thaps23886.5;Parent=Thaps23886;constitutive=1;ensembl_end_phase=1;rank=5 chr8 . CDS 1195215 1195397 . - 0 ID=Thaps23886;Parent=Thaps23886;rank=4 chr8 . exon 1195215 1195397 . - . ID=Thaps23886.4;Parent=Thaps23886;constitutive=1;rank=4 chr8 . CDS 1195536 1196017 . - 0 ID=Thaps23886;Parent=Thaps23886;rank=3 chr8 . exon 1195536 1196017 . - . ID=Thaps23886.3;Parent=Thaps23886;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1196137 1196215 . - 0 ID=Thaps23886;Parent=Thaps23886;rank=2 chr8 . exon 1196137 1196215 . - . ID=Thaps23886.2;Parent=Thaps23886;constitutive=1;ensembl_end_phase=1;rank=2 chr8 . CDS 1196483 1196547 . - 0 ID=Thaps23886;Parent=Thaps23886;rank=1 chr8 . exon 1196483 1196547 . - . ID=Thaps23886.1;Parent=Thaps23886;constitutive=1;ensembl_end_phase=2;rank=1 chr8 ensembl protein_coding_gene 1196930 1199560 . + . ID=Thaps23887;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L1];external_name=Thaps23887;logic_name=jgi_thaps3 chr8 ensembl transcript 1196930 1199560 . + . ID=Thaps23887;Parent=Thaps23887;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1196930 1198156 . + 0 ID=Thaps23887;Parent=Thaps23887;rank=1 chr8 . exon 1196930 1198156 . + . ID=Thaps23887.1;Parent=Thaps23887;constitutive=1;rank=1 chr8 . CDS 1198595 1199560 . + 0 ID=Thaps23887;Parent=Thaps23887;rank=2 chr8 ensembl protein_coding_gene 1187778 1188887 . + . ID=Thaps36037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K8];external_name=Thaps36037;logic_name=jgi_thaps3 chr8 ensembl transcript 1187778 1188887 . + . ID=Thaps36037;Parent=Thaps36037;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1187778 1187992 . + 0 ID=Thaps36037;Parent=Thaps36037;rank=1 chr8 . exon 1187778 1187992 . + . ID=Thaps36037.1;Parent=Thaps36037;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 1188185 1188887 . + 0 ID=Thaps36037;Parent=Thaps36037;rank=2 chr8 . exon 1188185 1188887 . + . ID=Thaps36037.2;Parent=Thaps36037;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 1189475 1190248 . - . ID=Thaps7810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7K9];external_name=Thaps7810;logic_name=jgi_thaps3 chr8 ensembl transcript 1189475 1190248 . - . ID=Thaps7810;Parent=Thaps7810;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1189475 1190248 . - 0 ID=Thaps7810;Parent=Thaps7810;rank=1 chr8 . exon 1189475 1190248 . - . ID=Thaps7810.1;Parent=Thaps7810;constitutive=1;rank=1 chr8 . repeat_region 1198237 1198526 . + . description=scaffold_26_76_1_226177_228534 chr8 . exon 1198595 1199560 . + . ID=Thaps23887.2;Parent=Thaps23887;constitutive=1;rank=2 chr8 ensembl protein_coding_gene 1199622 1205452 . - . ID=Thaps23888;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L2];external_name=Thaps23888;logic_name=jgi_thaps3 chr8 ensembl transcript 1199622 1205452 . - . ID=Thaps23888;Parent=Thaps23888;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1199622 1200342 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=27 chr8 . exon 1199622 1200342 . - . ID=Thaps23888.27;Parent=Thaps23888;constitutive=1;ensembl_end_phase=1;rank=27 chr8 . CDS 1200447 1201016 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=26 chr8 . exon 1200447 1201016 . - . ID=Thaps23888.26;Parent=Thaps23888;constitutive=1;rank=26 chr8 . CDS 1201154 1201213 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=25 chr8 . exon 1201154 1201213 . - . ID=Thaps23888.25;Parent=Thaps23888;constitutive=1;rank=25 chr8 . CDS 1201307 1201341 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=24 chr8 . exon 1201307 1201341 . - . ID=Thaps23888.24;Parent=Thaps23888;constitutive=1;ensembl_end_phase=2;rank=24 chr8 . CDS 1201455 1201514 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=23 chr8 . exon 1201455 1201514 . - . ID=Thaps23888.23;Parent=Thaps23888;constitutive=1;rank=23 chr8 . CDS 1201597 1201632 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=22 chr8 . exon 1201597 1201632 . - . ID=Thaps23888.22;Parent=Thaps23888;constitutive=1;rank=22 chr8 . CDS 1201799 1201822 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=21 chr8 . exon 1201799 1201822 . - . ID=Thaps23888.21;Parent=Thaps23888;constitutive=1;rank=21 chr8 . CDS 1201937 1201972 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=20 chr8 . exon 1201937 1201972 . - . ID=Thaps23888.20;Parent=Thaps23888;constitutive=1;rank=20 chr8 . CDS 1202070 1202093 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=19 chr8 . exon 1202070 1202093 . - . ID=Thaps23888.19;Parent=Thaps23888;constitutive=1;rank=19 chr8 . CDS 1202210 1202269 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=18 chr8 . exon 1202210 1202269 . - . ID=Thaps23888.18;Parent=Thaps23888;constitutive=1;rank=18 chr8 . CDS 1202387 1202470 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=17 chr8 . exon 1202387 1202470 . - . ID=Thaps23888.17;Parent=Thaps23888;constitutive=1;rank=17 chr8 . CDS 1202573 1202632 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=16 chr8 . exon 1202573 1202632 . - . ID=Thaps23888.16;Parent=Thaps23888;constitutive=1;rank=16 chr8 . CDS 1202767 1202826 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=15 chr8 . exon 1202767 1202826 . - . ID=Thaps23888.15;Parent=Thaps23888;constitutive=1;rank=15 chr8 . CDS 1202922 1202981 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=14 chr8 . exon 1202922 1202981 . - . ID=Thaps23888.14;Parent=Thaps23888;constitutive=1;rank=14 chr8 . CDS 1203070 1203171 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=13 chr8 . exon 1203070 1203171 . - . ID=Thaps23888.13;Parent=Thaps23888;constitutive=1;rank=13 chr8 . CDS 1203286 1203381 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=12 chr8 . exon 1203286 1203381 . - . ID=Thaps23888.12;Parent=Thaps23888;constitutive=1;rank=12 chr8 . CDS 1203464 1203523 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=11 chr8 . exon 1203464 1203523 . - . ID=Thaps23888.11;Parent=Thaps23888;constitutive=1;rank=11 chr8 . CDS 1203630 1203689 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=10 chr8 . exon 1203630 1203689 . - . ID=Thaps23888.10;Parent=Thaps23888;constitutive=1;rank=10 chr8 . CDS 1203844 1203879 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=9 chr8 . exon 1203844 1203879 . - . ID=Thaps23888.9;Parent=Thaps23888;constitutive=1;rank=9 chr8 . CDS 1204018 1204065 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=8 chr8 . exon 1204018 1204065 . - . ID=Thaps23888.8;Parent=Thaps23888;constitutive=1;rank=8 chr8 . CDS 1204204 1204263 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=7 chr8 . exon 1204204 1204263 . - . ID=Thaps23888.7;Parent=Thaps23888;constitutive=1;rank=7 chr8 . CDS 1204374 1204409 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=6 chr8 . exon 1204374 1204409 . - . ID=Thaps23888.6;Parent=Thaps23888;constitutive=1;rank=6 chr8 . CDS 1204512 1204571 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=5 chr8 . exon 1204512 1204571 . - . ID=Thaps23888.5;Parent=Thaps23888;constitutive=1;rank=5 chr8 . CDS 1204699 1204809 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=4 chr8 . exon 1204699 1204809 . - . ID=Thaps23888.4;Parent=Thaps23888;constitutive=1;rank=4 chr8 . CDS 1204842 1204877 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=3 chr8 . exon 1204842 1204877 . - . ID=Thaps23888.3;Parent=Thaps23888;constitutive=1;rank=3 chr8 . CDS 1205109 1205189 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=2 chr8 . exon 1205109 1205189 . - . ID=Thaps23888.2;Parent=Thaps23888;constitutive=1;rank=2 chr8 . CDS 1205399 1205452 . - 0 ID=Thaps23888;Parent=Thaps23888;rank=1 chr8 . exon 1205399 1205452 . - . ID=Thaps23888.1;Parent=Thaps23888;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1206600 1208788 . + . ID=Thaps7815;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L3];external_name=Thaps7815;logic_name=jgi_thaps3 chr8 ensembl transcript 1206600 1208788 . + . ID=Thaps7815;Parent=Thaps7815;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1206600 1206758 . + 0 ID=Thaps7815;Parent=Thaps7815;rank=1 chr8 . exon 1206600 1206758 . + . ID=Thaps7815.1;Parent=Thaps7815;constitutive=1;rank=1 chr8 . CDS 1206866 1206925 . + 0 ID=Thaps7815;Parent=Thaps7815;rank=2 chr8 . exon 1206866 1206925 . + . ID=Thaps7815.2;Parent=Thaps7815;constitutive=1;rank=2 chr8 . CDS 1207069 1207103 . + 0 ID=Thaps7815;Parent=Thaps7815;rank=3 chr8 . exon 1207069 1207103 . + . ID=Thaps7815.3;Parent=Thaps7815;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . CDS 1207197 1207256 . + 0 ID=Thaps7815;Parent=Thaps7815;rank=4 chr8 . exon 1207197 1207256 . + . ID=Thaps7815.4;Parent=Thaps7815;constitutive=1;rank=4 chr8 . CDS 1207394 1207963 . + 0 ID=Thaps7815;Parent=Thaps7815;rank=5 chr8 . CDS 1208068 1208788 . + 0 ID=Thaps7815;Parent=Thaps7815;rank=6 chr8 . repeat_region 1212024 1212031 . ? . description=dust chr8 . repeat_region 1213400 1213574 . - . description=Copia3LTR_TP chr8 . exon 1207394 1207963 . + . ID=Thaps7815.5;Parent=Thaps7815;constitutive=1;rank=5 chr8 . exon 1208068 1208788 . + . ID=Thaps7815.6;Parent=Thaps7815;constitutive=1;ensembl_end_phase=1;rank=6 chr8 ensembl protein_coding_gene 1210353 1212996 . - . ID=Thaps7816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L4];external_name=Thaps7816;logic_name=jgi_thaps3 chr8 ensembl transcript 1210353 1212996 . - . ID=Thaps7816;Parent=Thaps7816;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1210353 1211202 . - 0 ID=Thaps7816;Parent=Thaps7816;rank=3 chr8 . exon 1210353 1211202 . - . ID=Thaps7816.3;Parent=Thaps7816;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 1211344 1211834 . - 0 ID=Thaps7816;Parent=Thaps7816;rank=2 chr8 . exon 1211344 1211834 . - . ID=Thaps7816.2;Parent=Thaps7816;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1211887 1212996 . - 0 ID=Thaps7816;Parent=Thaps7816;rank=1 chr8 . exon 1211887 1212996 . - . ID=Thaps7816.1;Parent=Thaps7816;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1215344 1219375 . - . ID=Thaps7817;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L5];external_name=Thaps7817;logic_name=jgi_thaps3 chr8 ensembl transcript 1215344 1219375 . - . ID=Thaps7817;Parent=Thaps7817;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1215344 1219375 . - 0 ID=Thaps7817;Parent=Thaps7817;rank=1 chr8 . exon 1215344 1219375 . - . ID=Thaps7817.1;Parent=Thaps7817;constitutive=1;rank=1 chr8 . repeat_region 1222302 1222335 . ? . description=trf chr8 ensembl protein_coding_gene 1220515 1223139 . + . ID=Thaps7818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L6];external_name=Thaps7818;logic_name=jgi_thaps3 chr8 ensembl transcript 1220515 1223139 . + . ID=Thaps7818;Parent=Thaps7818;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1220515 1223139 . + 0 ID=Thaps7818;Parent=Thaps7818;rank=1 chr8 . exon 1220515 1223139 . + . ID=Thaps7818.1;Parent=Thaps7818;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1224932 1226482 . - . ID=Thaps7819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L7];external_name=Thaps7819;logic_name=jgi_thaps3 chr8 ensembl transcript 1224932 1226482 . - . ID=Thaps7819;Parent=Thaps7819;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1224932 1226482 . - 0 ID=Thaps7819;Parent=Thaps7819;rank=1 chr8 . exon 1224932 1226482 . - . ID=Thaps7819.1;Parent=Thaps7819;constitutive=1;rank=1 chr8 . repeat_region 1232156 1232311 . + . description=Copia4I_TP chr8 ensembl protein_coding_gene 1232491 1234349 . - . ID=Thaps23890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M1];external_name=Thaps23890;logic_name=jgi_thaps3 chr8 ensembl transcript 1232491 1234349 . - . ID=Thaps23890;Parent=Thaps23890;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1232491 1233116 . - 0 ID=Thaps23890;Parent=Thaps23890;rank=4 chr8 . exon 1232491 1233116 . - . ID=Thaps23890.4;Parent=Thaps23890;constitutive=1;ensembl_end_phase=2;rank=4 chr8 . CDS 1233427 1233474 . - 0 ID=Thaps23890;Parent=Thaps23890;rank=3 chr8 . exon 1233427 1233474 . - . ID=Thaps23890.3;Parent=Thaps23890;constitutive=1;rank=3 chr8 . CDS 1233624 1233944 . - 0 ID=Thaps23890;Parent=Thaps23890;rank=2 chr8 . exon 1233624 1233944 . - . ID=Thaps23890.2;Parent=Thaps23890;constitutive=1;rank=2 chr8 . CDS 1234052 1234349 . - 0 ID=Thaps23890;Parent=Thaps23890;rank=1 chr8 . exon 1234052 1234349 . - . ID=Thaps23890.1;Parent=Thaps23890;constitutive=1;ensembl_end_phase=1;rank=1 chr8 ensembl protein_coding_gene 1227992 1228657 . - . ID=Thaps41655;biotype=protein_coding;description=Fucoxanthin chl a/c light-harvesting protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L8];external_name=LHCR9;logic_name=jgi_thaps3 chr8 ensembl transcript 1227992 1228657 . - . ID=Thaps41655;Parent=Thaps41655;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1227992 1228477 . - 0 ID=Thaps41655;Parent=Thaps41655;rank=2 chr8 . exon 1227992 1228477 . - . ID=Thaps41655.2;Parent=Thaps41655;constitutive=1;rank=2 chr8 . CDS 1228652 1228657 . - 0 ID=Thaps41655;Parent=Thaps41655;rank=1 chr8 . exon 1228652 1228657 . - . ID=Thaps41655.1;Parent=Thaps41655;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1229432 1229980 . - . ID=Thaps7821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7L9];external_name=Thaps7821;logic_name=jgi_thaps3 chr8 ensembl transcript 1229432 1229980 . - . ID=Thaps7821;Parent=Thaps7821;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1229432 1229980 . - 0 ID=Thaps7821;Parent=Thaps7821;rank=1 chr8 . exon 1229432 1229980 . - . ID=Thaps7821.1;Parent=Thaps7821;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1230576 1231118 . - . ID=Thaps7822;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M0];external_name=Thaps7822;logic_name=jgi_thaps3 chr8 ensembl transcript 1230576 1231118 . - . ID=Thaps7822;Parent=Thaps7822;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1230576 1231118 . - 0 ID=Thaps7822;Parent=Thaps7822;rank=1 chr8 . exon 1230576 1231118 . - . ID=Thaps7822.1;Parent=Thaps7822;constitutive=1;rank=1 chr8 . repeat_region 1238571 1238773 . ? . description=trf chr8 . repeat_region 1242263 1242300 . ? . description=dust chr8 . repeat_region 1242581 1242637 . + . description=Harbinger4_TP chr8 . repeat_region 1242639 1242872 . - . description=Harbinger4_TP chr8 . repeat_region 1242658 1242665 . ? . description=dust chr8 . repeat_region 1244299 1244492 . + . description=TE2c_TP chr8 . repeat_region 1244716 1244723 . ? . description=dust chr8 . repeat_region 1244760 1245177 . + . description=Copia5ALTR_TP chr8 ensembl protein_coding_gene 1240866 1241536 . + . ID=Thaps263472;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M3];external_name=Thaps263472;logic_name=jgi_thaps3 chr8 ensembl transcript 1240866 1241536 . + . ID=Thaps263472;Parent=Thaps263472;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1240866 1241319 . + 0 ID=Thaps263472;Parent=Thaps263472;rank=1 chr8 . exon 1240866 1241319 . + . ID=Thaps263472.1;Parent=Thaps263472;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1241338 1241536 . + 0 ID=Thaps263472;Parent=Thaps263472;rank=2 chr8 . exon 1241338 1241536 . + . ID=Thaps263472.2;Parent=Thaps263472;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 1239049 1239732 . + . ID=Thaps7825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M2];external_name=Thaps7825;logic_name=jgi_thaps3 chr8 ensembl transcript 1239049 1239732 . + . ID=Thaps7825;Parent=Thaps7825;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1239049 1239101 . + 0 ID=Thaps7825;Parent=Thaps7825;rank=1 chr8 . exon 1239049 1239101 . + . ID=Thaps7825.1;Parent=Thaps7825;constitutive=1;ensembl_end_phase=2;rank=1 chr8 . CDS 1239192 1239732 . + 0 ID=Thaps7825;Parent=Thaps7825;rank=2 chr8 . exon 1239192 1239732 . + . ID=Thaps7825.2;Parent=Thaps7825;constitutive=1;ensembl_end_phase=1;rank=2 chr8 ensembl protein_coding_gene 1243516 1244219 . - . ID=Thaps7827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M4];external_name=Thaps7827;logic_name=jgi_thaps3 chr8 ensembl transcript 1243516 1244219 . - . ID=Thaps7827;Parent=Thaps7827;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1243516 1244103 . - 0 ID=Thaps7827;Parent=Thaps7827;rank=2 chr8 . exon 1243516 1244103 . - . ID=Thaps7827.2;Parent=Thaps7827;constitutive=1;rank=2 chr8 . CDS 1244136 1244219 . - 0 ID=Thaps7827;Parent=Thaps7827;rank=1 chr8 . exon 1244136 1244219 . - . ID=Thaps7827.1;Parent=Thaps7827;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1245243 1246607 . + . ID=Thaps7828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M5];external_name=Thaps7828;logic_name=jgi_thaps3 chr8 ensembl transcript 1245243 1246607 . + . ID=Thaps7828;Parent=Thaps7828;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1245243 1246607 . + 0 ID=Thaps7828;Parent=Thaps7828;rank=1 chr8 . exon 1245243 1246607 . + . ID=Thaps7828.1;Parent=Thaps7828;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1247750 1247947 . - . ID=Thaps20462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M6];external_name=Thaps20462;logic_name=jgi_thaps3 chr8 ensembl transcript 1247750 1247947 . - . ID=Thaps20462;Parent=Thaps20462;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1247750 1247947 . - 0 ID=Thaps20462;Parent=Thaps20462;rank=1 chr8 . exon 1247750 1247947 . - . ID=Thaps20462.1;Parent=Thaps20462;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1253524 1265540 . + . ID=Thaps23894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M9];external_name=Thaps23894;logic_name=jgi_thaps3 chr8 ensembl transcript 1253524 1265540 . + . ID=Thaps23894;Parent=Thaps23894;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1253524 1253643 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=1 chr8 . exon 1253524 1253643 . + . ID=Thaps23894.1;Parent=Thaps23894;constitutive=1;rank=1 chr8 . CDS 1253886 1253909 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=2 chr8 . exon 1253886 1253909 . + . ID=Thaps23894.2;Parent=Thaps23894;constitutive=1;rank=2 chr8 . CDS 1254276 1254335 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=3 chr8 . exon 1254276 1254335 . + . ID=Thaps23894.3;Parent=Thaps23894;constitutive=1;rank=3 chr8 . CDS 1254462 1254485 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=4 chr8 . exon 1254462 1254485 . + . ID=Thaps23894.4;Parent=Thaps23894;constitutive=1;rank=4 chr8 . CDS 1254599 1254754 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=5 chr8 . exon 1254599 1254754 . + . ID=Thaps23894.5;Parent=Thaps23894;constitutive=1;rank=5 chr8 . CDS 1254840 1254875 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=6 chr8 . exon 1254840 1254875 . + . ID=Thaps23894.6;Parent=Thaps23894;constitutive=1;rank=6 chr8 . CDS 1254996 1255043 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=7 chr8 . exon 1254996 1255043 . + . ID=Thaps23894.7;Parent=Thaps23894;constitutive=1;rank=7 chr8 . CDS 1255166 1255201 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=8 chr8 . exon 1255166 1255201 . + . ID=Thaps23894.8;Parent=Thaps23894;constitutive=1;rank=8 chr8 . CDS 1255277 1255618 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=9 chr8 . exon 1255277 1255618 . + . ID=Thaps23894.9;Parent=Thaps23894;constitutive=1;rank=9 chr8 . CDS 1255769 1255846 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=10 chr8 . exon 1255769 1255846 . + . ID=Thaps23894.10;Parent=Thaps23894;constitutive=1;rank=10 chr8 . CDS 1255951 1255998 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=11 chr8 . exon 1255951 1255998 . + . ID=Thaps23894.11;Parent=Thaps23894;constitutive=1;rank=11 chr8 . CDS 1256097 1256156 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=12 chr8 . exon 1256097 1256156 . + . ID=Thaps23894.12;Parent=Thaps23894;constitutive=1;rank=12 chr8 . CDS 1256288 1256323 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=13 chr8 . exon 1256288 1256323 . + . ID=Thaps23894.13;Parent=Thaps23894;constitutive=1;rank=13 chr8 . CDS 1256434 1256493 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=14 chr8 . exon 1256434 1256493 . + . ID=Thaps23894.14;Parent=Thaps23894;constitutive=1;rank=14 chr8 . CDS 1256620 1256643 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=15 chr8 . exon 1256620 1256643 . + . ID=Thaps23894.15;Parent=Thaps23894;constitutive=1;rank=15 chr8 . CDS 1256838 1256873 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=16 chr8 . exon 1256838 1256873 . + . ID=Thaps23894.16;Parent=Thaps23894;constitutive=1;rank=16 chr8 . CDS 1257132 1257178 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=17 chr8 . exon 1257132 1257178 . + . ID=Thaps23894.17;Parent=Thaps23894;constitutive=1;ensembl_end_phase=2;rank=17 chr8 . CDS 1257276 1257372 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=18 chr8 . CDS 1257471 1257530 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=19 chr8 . CDS 1257625 1257684 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=20 chr8 . CDS 1257785 1257880 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=21 chr8 . CDS 1257987 1258088 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=22 chr8 . CDS 1258326 1258361 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=23 chr8 . CDS 1258425 1258526 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=24 chr8 . CDS 1258785 1258844 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=25 chr8 . CDS 1258953 1259012 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=26 chr8 . CDS 1259192 1259227 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=27 chr8 . CDS 1259324 1259383 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=28 chr8 . CDS 1259498 1259557 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=29 chr8 . CDS 1259679 1259726 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=30 chr8 . CDS 1259816 1259896 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=31 chr8 . CDS 1260043 1260102 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=32 chr8 . CDS 1260209 1260268 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=33 chr8 . CDS 1260351 1260446 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=34 chr8 . CDS 1260584 1260685 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=35 chr8 . CDS 1260774 1260833 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=36 chr8 . CDS 1260929 1260988 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=37 chr8 . CDS 1261123 1261182 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=38 chr8 . CDS 1261297 1261380 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=39 chr8 . CDS 1261500 1261559 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=40 chr8 . CDS 1261797 1261832 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=41 chr8 . CDS 1262137 1262172 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=42 chr8 . CDS 1262242 1262277 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=43 chr8 . CDS 1262582 1262617 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=44 chr8 . CDS 1262700 1262759 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=45 chr8 . CDS 1262894 1262917 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=46 chr8 . CDS 1263079 1263102 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=47 chr8 . CDS 1263181 1263204 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=48 chr8 . CDS 1263356 1263379 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=49 chr8 . CDS 1263482 1263516 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=50 chr8 . CDS 1263625 1263649 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=51 chr8 . CDS 1263742 1263776 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=52 chr8 . CDS 1263874 1263933 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=53 chr8 . CDS 1264005 1264182 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=54 chr8 . CDS 1264264 1264307 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=55 chr8 . CDS 1264397 1264959 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=56 chr8 . CDS 1265041 1265540 . + 0 ID=Thaps23894;Parent=Thaps23894;rank=57 chr8 ensembl protein_coding_gene 1251082 1252451 . - . ID=Thaps41658;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M8];external_name=Thaps41658;logic_name=jgi_thaps3 chr8 ensembl transcript 1251082 1252451 . - . ID=Thaps41658;Parent=Thaps41658;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1251082 1251089 . - 0 ID=Thaps41658;Parent=Thaps41658;rank=5 chr8 . exon 1251082 1251089 . - . ID=Thaps41658.5;Parent=Thaps41658;constitutive=1;ensembl_end_phase=2;rank=5 chr8 . CDS 1251238 1251367 . - 0 ID=Thaps41658;Parent=Thaps41658;rank=4 chr8 . exon 1251238 1251367 . - . ID=Thaps41658.4;Parent=Thaps41658;constitutive=1;ensembl_end_phase=1;rank=4 chr8 . CDS 1251571 1251691 . - 0 ID=Thaps41658;Parent=Thaps41658;rank=3 chr8 . exon 1251571 1251691 . - . ID=Thaps41658.3;Parent=Thaps41658;constitutive=1;ensembl_end_phase=1;rank=3 chr8 . CDS 1251961 1252028 . - 0 ID=Thaps41658;Parent=Thaps41658;rank=2 chr8 . exon 1251961 1252028 . - . ID=Thaps41658.2;Parent=Thaps41658;constitutive=1;ensembl_end_phase=2;rank=2 chr8 . CDS 1252437 1252451 . - 0 ID=Thaps41658;Parent=Thaps41658;rank=1 chr8 . exon 1252437 1252451 . - . ID=Thaps41658.1;Parent=Thaps41658;constitutive=1;rank=1 chr8 ensembl protein_coding_gene 1248673 1250717 . + . ID=Thaps7830;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C7M7];external_name=Thaps7830;logic_name=jgi_thaps3 chr8 ensembl transcript 1248673 1250717 . + . ID=Thaps7830;Parent=Thaps7830;biotype=protein_coding;logic_name=jgi_thaps3 chr8 . CDS 1248673 1249330 . + 0 ID=Thaps7830;Parent=Thaps7830;rank=1 chr8 . exon 1248673 1249330 . + . ID=Thaps7830.1;Parent=Thaps7830;constitutive=1;ensembl_end_phase=1;rank=1 chr8 . CDS 1249421 1249858 . + 0 ID=Thaps7830;Parent=Thaps7830;rank=2 chr8 . exon 1249421 1249858 . + . ID=Thaps7830.2;Parent=Thaps7830;constitutive=1;rank=2 chr8 . CDS 1249930 1250717 . + 0 ID=Thaps7830;Parent=Thaps7830;rank=3 chr8 . exon 1249930 1250717 . + . ID=Thaps7830.3;Parent=Thaps7830;constitutive=1;ensembl_end_phase=2;rank=3 chr8 . repeat_region 1261782 1262669 . ? . description=trf chr8 . repeat_region 1266906 1266935 . ? . description=trf chr8 . repeat_region 1266906 1266935 . ? . description=trf chr8 . repeat_region 1266906 1266935 . ? . description=dust chr8 . exon 1257276 1257372 . + . ID=Thaps23894.18;Parent=Thaps23894;constitutive=1;ensembl_end_phase=1;rank=18 chr8 . exon 1257471 1257530 . + . ID=Thaps23894.19;Parent=Thaps23894;constitutive=1;rank=19 chr8 . exon 1257625 1257684 . + . ID=Thaps23894.20;Parent=Thaps23894;constitutive=1;rank=20 chr8 . exon 1257785 1257880 . + . ID=Thaps23894.21;Parent=Thaps23894;constitutive=1;rank=21 chr8 . exon 1257987 1258088 . + . ID=Thaps23894.22;Parent=Thaps23894;constitutive=1;rank=22 chr8 . exon 1258326 1258361 . + . ID=Thaps23894.23;Parent=Thaps23894;constitutive=1;rank=23 chr8 . exon 1258425 1258526 . + . ID=Thaps23894.24;Parent=Thaps23894;constitutive=1;rank=24 chr8 . exon 1258785 1258844 . + . ID=Thaps23894.25;Parent=Thaps23894;constitutive=1;rank=25 chr8 . exon 1258953 1259012 . + . ID=Thaps23894.26;Parent=Thaps23894;constitutive=1;rank=26 chr8 . exon 1259192 1259227 . + . ID=Thaps23894.27;Parent=Thaps23894;constitutive=1;rank=27 chr8 . exon 1259324 1259383 . + . ID=Thaps23894.28;Parent=Thaps23894;constitutive=1;rank=28 chr8 . exon 1259498 1259557 . + . ID=Thaps23894.29;Parent=Thaps23894;constitutive=1;rank=29 chr8 . exon 1259679 1259726 . + . ID=Thaps23894.30;Parent=Thaps23894;constitutive=1;rank=30 chr8 . exon 1259816 1259896 . + . ID=Thaps23894.31;Parent=Thaps23894;constitutive=1;rank=31 chr8 . exon 1260043 1260102 . + . ID=Thaps23894.32;Parent=Thaps23894;constitutive=1;rank=32 chr8 . exon 1260209 1260268 . + . ID=Thaps23894.33;Parent=Thaps23894;constitutive=1;rank=33 chr8 . exon 1260351 1260446 . + . ID=Thaps23894.34;Parent=Thaps23894;constitutive=1;rank=34 chr8 . exon 1260584 1260685 . + . ID=Thaps23894.35;Parent=Thaps23894;constitutive=1;rank=35 chr8 . exon 1260774 1260833 . + . ID=Thaps23894.36;Parent=Thaps23894;constitutive=1;rank=36 chr8 . exon 1260929 1260988 . + . ID=Thaps23894.37;Parent=Thaps23894;constitutive=1;rank=37 chr8 . exon 1261123 1261182 . + . ID=Thaps23894.38;Parent=Thaps23894;constitutive=1;rank=38 chr8 . exon 1261297 1261380 . + . ID=Thaps23894.39;Parent=Thaps23894;constitutive=1;rank=39 chr8 . exon 1261500 1261559 . + . ID=Thaps23894.40;Parent=Thaps23894;constitutive=1;rank=40 chr8 . exon 1261797 1261832 . + . ID=Thaps23894.41;Parent=Thaps23894;constitutive=1;rank=41 chr8 . exon 1262137 1262172 . + . ID=Thaps23894.42;Parent=Thaps23894;constitutive=1;rank=42 chr8 . exon 1262242 1262277 . + . ID=Thaps23894.43;Parent=Thaps23894;constitutive=1;rank=43 chr8 . exon 1262582 1262617 . + . ID=Thaps23894.44;Parent=Thaps23894;constitutive=1;rank=44 chr8 . exon 1262700 1262759 . + . ID=Thaps23894.45;Parent=Thaps23894;constitutive=1;rank=45 chr8 . exon 1262894 1262917 . + . ID=Thaps23894.46;Parent=Thaps23894;constitutive=1;rank=46 chr8 . exon 1263079 1263102 . + . ID=Thaps23894.47;Parent=Thaps23894;constitutive=1;rank=47 chr8 . exon 1263181 1263204 . + . ID=Thaps23894.48;Parent=Thaps23894;constitutive=1;rank=48 chr8 . exon 1263356 1263379 . + . ID=Thaps23894.49;Parent=Thaps23894;constitutive=1;rank=49 chr8 . exon 1263482 1263516 . + . ID=Thaps23894.50;Parent=Thaps23894;constitutive=1;ensembl_end_phase=2;rank=50 chr8 . exon 1263625 1263649 . + . ID=Thaps23894.51;Parent=Thaps23894;constitutive=1;ensembl_end_phase=1;rank=51 chr8 . exon 1263742 1263776 . + . ID=Thaps23894.52;Parent=Thaps23894;constitutive=1;ensembl_end_phase=2;rank=52 chr8 . exon 1263874 1263933 . + . ID=Thaps23894.53;Parent=Thaps23894;constitutive=1;rank=53 chr8 . exon 1264005 1264182 . + . ID=Thaps23894.54;Parent=Thaps23894;constitutive=1;ensembl_end_phase=1;rank=54 chr8 . exon 1264264 1264307 . + . ID=Thaps23894.55;Parent=Thaps23894;constitutive=1;ensembl_end_phase=2;rank=55 chr8 . exon 1264397 1264959 . + . ID=Thaps23894.56;Parent=Thaps23894;constitutive=1;ensembl_end_phase=2;rank=56 chr8 . exon 1265041 1265540 . + . ID=Thaps23894.57;Parent=Thaps23894;constitutive=1;ensembl_end_phase=2;rank=57 ##gff-version 3 ##sequence-region 7 1 1992434 chr7 . repeat_region 1 236 . ? . description=trf chr7 . repeat_region 1 236 . ? . description=dust chr7 . repeat_region 282 290 . ? . description=dust chr7 . repeat_region 413 422 . ? . description=dust chr7 . repeat_region 783 791 . ? . description=dust chr7 . repeat_region 914 928 . ? . description=dust chr7 . repeat_region 1284 1359 . ? . description=dust chr7 . repeat_region 1284 1375 . ? . description=trf chr7 . repeat_region 1284 1375 . ? . description=trf chr7 . repeat_region 1556 3205 . + . description=Copia1I_TP chr7 . repeat_region 7782 7807 . ? . description=trf chr7 . repeat_region 8244 9776 . + . description=tp9_ASNotSingleton chr7 ensembl gene 1722 2228 . + . ID=Thaps263044;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 1722 2228 . + . ID=Thaps263044;Parent=Thaps263044;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 1722 1900 . + . ID=Thaps263044.1;Parent=Thaps263044;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . exon 1921 2228 . + . ID=Thaps263044.2;Parent=Thaps263044;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . repeat_region 11582 11827 . + . description=Copia1LTR_TP chr7 ensembl protein_coding_gene 12614 16802 . - . ID=Thaps23330;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP13];external_name=Thaps23330;logic_name=jgi_thaps3 chr7 ensembl transcript 12614 16802 . - . ID=Thaps23330;Parent=Thaps23330;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 12614 13461 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=10 chr7 . exon 12614 13461 . - . ID=Thaps23330.10;Parent=Thaps23330;constitutive=1;ensembl_end_phase=2;rank=10 chr7 . CDS 13675 13729 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=9 chr7 . exon 13675 13729 . - . ID=Thaps23330.9;Parent=Thaps23330;constitutive=1;ensembl_end_phase=1;rank=9 chr7 . CDS 13821 13948 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=8 chr7 . exon 13821 13948 . - . ID=Thaps23330.8;Parent=Thaps23330;constitutive=1;ensembl_end_phase=2;rank=8 chr7 . CDS 14058 14186 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=7 chr7 . exon 14058 14186 . - . ID=Thaps23330.7;Parent=Thaps23330;constitutive=1;rank=7 chr7 . CDS 14310 14945 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=6 chr7 . exon 14310 14945 . - . ID=Thaps23330.6;Parent=Thaps23330;constitutive=1;rank=6 chr7 . CDS 15215 15430 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=5 chr7 . exon 15215 15430 . - . ID=Thaps23330.5;Parent=Thaps23330;constitutive=1;rank=5 chr7 . CDS 15506 15709 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=4 chr7 . exon 15506 15709 . - . ID=Thaps23330.4;Parent=Thaps23330;constitutive=1;rank=4 chr7 . CDS 15810 16053 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=3 chr7 . exon 15810 16053 . - . ID=Thaps23330.3;Parent=Thaps23330;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 16139 16475 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=2 chr7 . exon 16139 16475 . - . ID=Thaps23330.2;Parent=Thaps23330;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 16543 16802 . - 0 ID=Thaps23330;Parent=Thaps23330;rank=1 chr7 . exon 16543 16802 . - . ID=Thaps23330.1;Parent=Thaps23330;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 18504 19354 . + . ID=Thaps6620;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP14];external_name=Thaps6620;logic_name=jgi_thaps3 chr7 ensembl transcript 18504 19354 . + . ID=Thaps6620;Parent=Thaps6620;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 18504 18646 . + 0 ID=Thaps6620;Parent=Thaps6620;rank=1 chr7 . exon 18504 18646 . + . ID=Thaps6620.1;Parent=Thaps6620;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 18745 19354 . + 0 ID=Thaps6620;Parent=Thaps6620;rank=2 chr7 . exon 18745 19354 . + . ID=Thaps6620.2;Parent=Thaps6620;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . repeat_region 24174 24181 . ? . description=dust chr7 . repeat_region 27056 27064 . ? . description=dust chr7 ensembl protein_coding_gene 21108 25407 . - . ID=Thaps23331;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP15];external_name=Thaps23331;logic_name=jgi_thaps3 chr7 ensembl transcript 21108 25407 . - . ID=Thaps23331;Parent=Thaps23331;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 21108 21289 . - 0 ID=Thaps23331;Parent=Thaps23331;rank=7 chr7 . exon 21108 21289 . - . ID=Thaps23331.7;Parent=Thaps23331;constitutive=1;ensembl_end_phase=2;rank=7 chr7 . CDS 21332 22171 . - 0 ID=Thaps23331;Parent=Thaps23331;rank=6 chr7 . exon 21332 22171 . - . ID=Thaps23331.6;Parent=Thaps23331;constitutive=1;rank=6 chr7 . CDS 22280 22548 . - 0 ID=Thaps23331;Parent=Thaps23331;rank=5 chr7 . exon 22280 22548 . - . ID=Thaps23331.5;Parent=Thaps23331;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 22632 22669 . - 0 ID=Thaps23331;Parent=Thaps23331;rank=4 chr7 . exon 22632 22669 . - . ID=Thaps23331.4;Parent=Thaps23331;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 22758 22967 . - 0 ID=Thaps23331;Parent=Thaps23331;rank=3 chr7 . exon 22758 22967 . - . ID=Thaps23331.3;Parent=Thaps23331;constitutive=1;rank=3 chr7 . CDS 23038 23736 . - 0 ID=Thaps23331;Parent=Thaps23331;rank=2 chr7 . exon 23038 23736 . - . ID=Thaps23331.2;Parent=Thaps23331;constitutive=1;rank=2 chr7 . CDS 23809 25407 . - 0 ID=Thaps23331;Parent=Thaps23331;rank=1 chr7 . exon 23809 25407 . - . ID=Thaps23331.1;Parent=Thaps23331;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 26134 30455 . + . ID=Thaps23332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP16];external_name=Thaps23332;logic_name=jgi_thaps3 chr7 ensembl transcript 26134 30455 . + . ID=Thaps23332;Parent=Thaps23332;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 26134 26252 . + 0 ID=Thaps23332;Parent=Thaps23332;rank=1 chr7 . exon 26134 26252 . + . ID=Thaps23332.1;Parent=Thaps23332;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 26584 28660 . + 0 ID=Thaps23332;Parent=Thaps23332;rank=2 chr7 . exon 26584 28660 . + . ID=Thaps23332.2;Parent=Thaps23332;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 28750 29401 . + 0 ID=Thaps23332;Parent=Thaps23332;rank=3 chr7 . exon 28750 29401 . + . ID=Thaps23332.3;Parent=Thaps23332;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 29486 29573 . + 0 ID=Thaps23332;Parent=Thaps23332;rank=4 chr7 . exon 29486 29573 . + . ID=Thaps23332.4;Parent=Thaps23332;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 29656 30341 . + 0 ID=Thaps23332;Parent=Thaps23332;rank=5 chr7 . exon 29656 30341 . + . ID=Thaps23332.5;Parent=Thaps23332;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 30442 30455 . + 0 ID=Thaps23332;Parent=Thaps23332;rank=6 chr7 . repeat_region 33307 33363 . ? . description=trf chr7 . repeat_region 36408 36433 . ? . description=trf chr7 . exon 30442 30455 . + . ID=Thaps23332.6;Parent=Thaps23332;constitutive=1;ensembl_end_phase=2;rank=6 chr7 ensembl gene 32629 33958 . - . ID=Thaps263046;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 32629 33958 . - . ID=Thaps263046;Parent=Thaps263046;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 32629 32693 . - . ID=Thaps263046.7;Parent=Thaps263046;constitutive=1;ensembl_end_phase=2;rank=7 chr7 . exon 32764 32782 . - . ID=Thaps263046.6;Parent=Thaps263046;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . exon 32805 33013 . - . ID=Thaps263046.5;Parent=Thaps263046;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . exon 33128 33252 . - . ID=Thaps263046.4;Parent=Thaps263046;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . exon 33283 33371 . - . ID=Thaps263046.3;Parent=Thaps263046;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 33477 33743 . - . ID=Thaps263046.2;Parent=Thaps263046;constitutive=1;rank=2 chr7 . exon 33854 33958 . - . ID=Thaps263046.1;Parent=Thaps263046;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 35581 36374 . - . ID=Thaps269194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP17];external_name=Thaps269194;logic_name=jgi_thaps3 chr7 ensembl transcript 35581 36374 . - . ID=Thaps269194;Parent=Thaps269194;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 35581 36067 . - 0 ID=Thaps269194;Parent=Thaps269194;rank=2 chr7 . exon 35581 36067 . - . ID=Thaps269194.2;Parent=Thaps269194;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 36178 36374 . - 0 ID=Thaps269194;Parent=Thaps269194;rank=1 chr7 . exon 36178 36374 . - . ID=Thaps269194.1;Parent=Thaps269194;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 39144 39897 . + . ID=Thaps6625;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP18];external_name=Thaps6625;logic_name=jgi_thaps3 chr7 ensembl transcript 39144 39897 . + . ID=Thaps6625;Parent=Thaps6625;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 39144 39155 . + 0 ID=Thaps6625;Parent=Thaps6625;rank=1 chr7 . exon 39144 39155 . + . ID=Thaps6625.1;Parent=Thaps6625;constitutive=1;rank=1 chr7 . CDS 39373 39897 . + 0 ID=Thaps6625;Parent=Thaps6625;rank=2 chr7 . exon 39373 39897 . + . ID=Thaps6625.2;Parent=Thaps6625;constitutive=1;rank=2 chr7 . repeat_region 49328 49335 . ? . description=dust chr7 ensembl protein_coding_gene 40177 41733 . - . ID=Thaps6626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP19];external_name=Thaps6626;logic_name=jgi_thaps3 chr7 ensembl transcript 40177 41733 . - . ID=Thaps6626;Parent=Thaps6626;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 40177 41733 . - 0 ID=Thaps6626;Parent=Thaps6626;rank=1 chr7 . exon 40177 41733 . - . ID=Thaps6626.1;Parent=Thaps6626;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 43048 44654 . + . ID=Thaps6627;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP20];external_name=Thaps6627;logic_name=jgi_thaps3 chr7 ensembl transcript 43048 44654 . + . ID=Thaps6627;Parent=Thaps6627;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 43048 43787 . + 0 ID=Thaps6627;Parent=Thaps6627;rank=1 chr7 . exon 43048 43787 . + . ID=Thaps6627.1;Parent=Thaps6627;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 43869 43902 . + 0 ID=Thaps6627;Parent=Thaps6627;rank=2 chr7 . exon 43869 43902 . + . ID=Thaps6627.2;Parent=Thaps6627;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 43985 44512 . + 0 ID=Thaps6627;Parent=Thaps6627;rank=3 chr7 . exon 43985 44512 . + . ID=Thaps6627.3;Parent=Thaps6627;constitutive=1;rank=3 chr7 . CDS 44622 44654 . + 0 ID=Thaps6627;Parent=Thaps6627;rank=4 chr7 . exon 44622 44654 . + . ID=Thaps6627.4;Parent=Thaps6627;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 45003 47033 . + . ID=Thaps6628;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP21];external_name=Thaps6628;logic_name=jgi_thaps3 chr7 ensembl transcript 45003 47033 . + . ID=Thaps6628;Parent=Thaps6628;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 45003 45224 . + 0 ID=Thaps6628;Parent=Thaps6628;rank=1 chr7 . exon 45003 45224 . + . ID=Thaps6628.1;Parent=Thaps6628;constitutive=1;rank=1 chr7 . CDS 45348 45598 . + 0 ID=Thaps6628;Parent=Thaps6628;rank=2 chr7 . exon 45348 45598 . + . ID=Thaps6628.2;Parent=Thaps6628;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 45815 46440 . + 0 ID=Thaps6628;Parent=Thaps6628;rank=3 chr7 . exon 45815 46440 . + . ID=Thaps6628.3;Parent=Thaps6628;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 46696 47033 . + 0 ID=Thaps6628;Parent=Thaps6628;rank=4 chr7 . exon 46696 47033 . + . ID=Thaps6628.4;Parent=Thaps6628;constitutive=1;ensembl_end_phase=2;rank=4 chr7 ensembl protein_coding_gene 47645 48655 . + . ID=Thaps6629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP22];external_name=Thaps6629;logic_name=jgi_thaps3 chr7 ensembl transcript 47645 48655 . + . ID=Thaps6629;Parent=Thaps6629;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 47645 48655 . + 0 ID=Thaps6629;Parent=Thaps6629;rank=1 chr7 . exon 47645 48655 . + . ID=Thaps6629.1;Parent=Thaps6629;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 49670 53430 . + . ID=Thaps6630;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP23];external_name=Thaps6630;logic_name=jgi_thaps3 chr7 ensembl transcript 49670 53430 . + . ID=Thaps6630;Parent=Thaps6630;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 49670 50551 . + 0 ID=Thaps6630;Parent=Thaps6630;rank=1 chr7 . exon 49670 50551 . + . ID=Thaps6630.1;Parent=Thaps6630;constitutive=1;rank=1 chr7 . CDS 50629 51107 . + 0 ID=Thaps6630;Parent=Thaps6630;rank=2 chr7 . CDS 51453 51808 . + 0 ID=Thaps6630;Parent=Thaps6630;rank=3 chr7 . CDS 51895 51952 . + 0 ID=Thaps6630;Parent=Thaps6630;rank=4 chr7 . CDS 52251 53430 . + 0 ID=Thaps6630;Parent=Thaps6630;rank=5 chr7 . repeat_region 54987 55053 . ? . description=trf chr7 . repeat_region 55282 55305 . ? . description=trf chr7 . repeat_region 56682 56706 . ? . description=trf chr7 . repeat_region 57632 57665 . ? . description=trf chr7 . repeat_region 58798 59012 . ? . description=trf chr7 ensembl protein_coding_gene 56442 56999 . + . ID=Thaps263048;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP24];external_name=Thaps263048;logic_name=jgi_thaps3 chr7 ensembl transcript 56442 56999 . + . ID=Thaps263048;Parent=Thaps263048;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 56442 56999 . + 0 ID=Thaps263048;Parent=Thaps263048;rank=1 chr7 . exon 56442 56999 . + . ID=Thaps263048.1;Parent=Thaps263048;constitutive=1;rank=1 chr7 . exon 50629 51107 . + . ID=Thaps6630.2;Parent=Thaps6630;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 51453 51808 . + . ID=Thaps6630.3;Parent=Thaps6630;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 51895 51952 . + . ID=Thaps6630.4;Parent=Thaps6630;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . exon 52251 53430 . + . ID=Thaps6630.5;Parent=Thaps6630;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . repeat_region 66110 66173 . ? . description=dust chr7 ensembl protein_coding_gene 67497 79594 . + . ID=Thaps23334;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP27];external_name=Thaps23334;logic_name=jgi_thaps3 chr7 ensembl transcript 67497 79594 . + . ID=Thaps23334;Parent=Thaps23334;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 67497 69098 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=1 chr7 . exon 67497 69098 . + . ID=Thaps23334.1;Parent=Thaps23334;constitutive=1;rank=1 chr7 . CDS 69184 70116 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=2 chr7 . exon 69184 70116 . + . ID=Thaps23334.2;Parent=Thaps23334;constitutive=1;rank=2 chr7 . CDS 70208 70238 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=3 chr7 . CDS 70319 70441 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=4 chr7 . CDS 70465 71129 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=5 chr7 . CDS 71211 71246 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=6 chr7 . CDS 71437 72423 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=7 chr7 . CDS 72510 72617 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=8 chr7 . CDS 72721 72846 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=9 chr7 . CDS 72968 73111 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=10 chr7 . CDS 73234 73485 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=11 chr7 . CDS 73562 73687 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=12 chr7 . CDS 73811 74020 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=13 chr7 . CDS 74113 74196 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=14 chr7 . CDS 74318 74485 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=15 chr7 . CDS 74578 74661 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=16 chr7 . CDS 74777 74944 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=17 chr7 . CDS 75037 75120 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=18 chr7 . CDS 75205 75456 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=19 chr7 . CDS 75541 75834 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=20 chr7 . CDS 75911 76036 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=21 chr7 . CDS 76116 76241 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=22 chr7 . CDS 76291 76854 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=23 chr7 . CDS 76940 77743 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=24 chr7 . CDS 77840 79594 . + 0 ID=Thaps23334;Parent=Thaps23334;rank=25 chr7 ensembl protein_coding_gene 63084 63805 . - . ID=Thaps35314;biotype=protein_coding;description=Glutathione peroxidase [Source:UniProtKB/TrEMBL%3BAcc:B5YP25];external_name=Thaps35314;logic_name=jgi_thaps3 chr7 ensembl transcript 63084 63805 . - . ID=Thaps35314;Parent=Thaps35314;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 63084 63406 . - 0 ID=Thaps35314;Parent=Thaps35314;rank=2 chr7 . exon 63084 63406 . - . ID=Thaps35314.2;Parent=Thaps35314;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 63670 63805 . - 0 ID=Thaps35314;Parent=Thaps35314;rank=1 chr7 . exon 63670 63805 . - . ID=Thaps35314.1;Parent=Thaps35314;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 65454 65822 . + . ID=Thaps6633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP26];external_name=Thaps6633;logic_name=jgi_thaps3 chr7 ensembl transcript 65454 65822 . + . ID=Thaps6633;Parent=Thaps6633;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 65454 65822 . + 0 ID=Thaps6633;Parent=Thaps6633;rank=1 chr7 . exon 65454 65822 . + . ID=Thaps6633.1;Parent=Thaps6633;constitutive=1;rank=1 chr7 . repeat_region 73937 75144 . ? . description=trf chr7 . repeat_region 74269 74299 . ? . description=trf chr7 . exon 70208 70238 . + . ID=Thaps23334.3;Parent=Thaps23334;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . exon 70319 70441 . + . ID=Thaps23334.4;Parent=Thaps23334;constitutive=1;rank=4 chr7 . exon 70465 71129 . + . ID=Thaps23334.5;Parent=Thaps23334;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . exon 71211 71246 . + . ID=Thaps23334.6;Parent=Thaps23334;constitutive=1;rank=6 chr7 . exon 71437 72423 . + . ID=Thaps23334.7;Parent=Thaps23334;constitutive=1;rank=7 chr7 . exon 72510 72617 . + . ID=Thaps23334.8;Parent=Thaps23334;constitutive=1;rank=8 chr7 . exon 72721 72846 . + . ID=Thaps23334.9;Parent=Thaps23334;constitutive=1;rank=9 chr7 . exon 72968 73111 . + . ID=Thaps23334.10;Parent=Thaps23334;constitutive=1;rank=10 chr7 . exon 73234 73485 . + . ID=Thaps23334.11;Parent=Thaps23334;constitutive=1;rank=11 chr7 . exon 73562 73687 . + . ID=Thaps23334.12;Parent=Thaps23334;constitutive=1;rank=12 chr7 . exon 73811 74020 . + . ID=Thaps23334.13;Parent=Thaps23334;constitutive=1;rank=13 chr7 . exon 74113 74196 . + . ID=Thaps23334.14;Parent=Thaps23334;constitutive=1;rank=14 chr7 . exon 74318 74485 . + . ID=Thaps23334.15;Parent=Thaps23334;constitutive=1;rank=15 chr7 . exon 74578 74661 . + . ID=Thaps23334.16;Parent=Thaps23334;constitutive=1;rank=16 chr7 . exon 74777 74944 . + . ID=Thaps23334.17;Parent=Thaps23334;constitutive=1;rank=17 chr7 . exon 75037 75120 . + . ID=Thaps23334.18;Parent=Thaps23334;constitutive=1;rank=18 chr7 . exon 75205 75456 . + . ID=Thaps23334.19;Parent=Thaps23334;constitutive=1;rank=19 chr7 . exon 75541 75834 . + . ID=Thaps23334.20;Parent=Thaps23334;constitutive=1;rank=20 chr7 . exon 75911 76036 . + . ID=Thaps23334.21;Parent=Thaps23334;constitutive=1;rank=21 chr7 . exon 76116 76241 . + . ID=Thaps23334.22;Parent=Thaps23334;constitutive=1;rank=22 chr7 . exon 76291 76854 . + . ID=Thaps23334.23;Parent=Thaps23334;constitutive=1;rank=23 chr7 . exon 76940 77743 . + . ID=Thaps23334.24;Parent=Thaps23334;constitutive=1;rank=24 chr7 . exon 77840 79594 . + . ID=Thaps23334.25;Parent=Thaps23334;constitutive=1;rank=25 chr7 ensembl protein_coding_gene 79707 81599 . - . ID=Thaps6635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP28];external_name=Thaps6635;logic_name=jgi_thaps3 chr7 ensembl transcript 79707 81599 . - . ID=Thaps6635;Parent=Thaps6635;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 79707 81599 . - 0 ID=Thaps6635;Parent=Thaps6635;rank=1 chr7 . exon 79707 81599 . - . ID=Thaps6635.1;Parent=Thaps6635;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 81934 86292 . + . ID=Thaps6636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP29];external_name=Thaps6636;logic_name=jgi_thaps3 chr7 ensembl transcript 81934 86292 . + . ID=Thaps6636;Parent=Thaps6636;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 81934 83156 . + 0 ID=Thaps6636;Parent=Thaps6636;rank=1 chr7 . exon 81934 83156 . + . ID=Thaps6636.1;Parent=Thaps6636;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 83259 84164 . + 0 ID=Thaps6636;Parent=Thaps6636;rank=2 chr7 . exon 83259 84164 . + . ID=Thaps6636.2;Parent=Thaps6636;constitutive=1;rank=2 chr7 . CDS 84238 84846 . + 0 ID=Thaps6636;Parent=Thaps6636;rank=3 chr7 . exon 84238 84846 . + . ID=Thaps6636.3;Parent=Thaps6636;constitutive=1;rank=3 chr7 . CDS 84945 85414 . + 0 ID=Thaps6636;Parent=Thaps6636;rank=4 chr7 . exon 84945 85414 . + . ID=Thaps6636.4;Parent=Thaps6636;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 85451 86292 . + 0 ID=Thaps6636;Parent=Thaps6636;rank=5 chr7 . exon 85451 86292 . + . ID=Thaps6636.5;Parent=Thaps6636;constitutive=1;ensembl_end_phase=2;rank=5 chr7 ensembl protein_coding_gene 86411 86779 . - . ID=Thaps6637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP30];external_name=Thaps6637;logic_name=jgi_thaps3 chr7 ensembl transcript 86411 86779 . - . ID=Thaps6637;Parent=Thaps6637;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 86411 86779 . - 0 ID=Thaps6637;Parent=Thaps6637;rank=1 chr7 . exon 86411 86779 . - . ID=Thaps6637.1;Parent=Thaps6637;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 86972 88615 . + . ID=Thaps6638;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP31];external_name=Thaps6638;logic_name=jgi_thaps3 chr7 ensembl transcript 86972 88615 . + . ID=Thaps6638;Parent=Thaps6638;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 86972 88118 . + 0 ID=Thaps6638;Parent=Thaps6638;rank=1 chr7 . exon 86972 88118 . + . ID=Thaps6638.1;Parent=Thaps6638;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 88335 88615 . + 0 ID=Thaps6638;Parent=Thaps6638;rank=2 chr7 . exon 88335 88615 . + . ID=Thaps6638.2;Parent=Thaps6638;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . repeat_region 93154 93172 . ? . description=dust chr7 . repeat_region 94474 94521 . ? . description=trf chr7 . repeat_region 98843 98891 . ? . description=trf chr7 ensembl protein_coding_gene 97839 101400 . + . ID=Thaps263051;biotype=protein_coding;description=Copper transporter [Source:UniProtKB/TrEMBL%3BAcc:B5YP36];external_name=Thaps263051;logic_name=jgi_thaps3 chr7 ensembl transcript 97839 101400 . + . ID=Thaps263051;Parent=Thaps263051;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 97839 97977 . + 0 ID=Thaps263051;Parent=Thaps263051;rank=1 chr7 . exon 97839 97977 . + . ID=Thaps263051.1;Parent=Thaps263051;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 98053 98109 . + 0 ID=Thaps263051;Parent=Thaps263051;rank=2 chr7 . exon 98053 98109 . + . ID=Thaps263051.2;Parent=Thaps263051;constitutive=1;rank=2 chr7 . CDS 98299 98460 . + 0 ID=Thaps263051;Parent=Thaps263051;rank=3 chr7 . exon 98299 98460 . + . ID=Thaps263051.3;Parent=Thaps263051;constitutive=1;rank=3 chr7 . CDS 98485 98586 . + 0 ID=Thaps263051;Parent=Thaps263051;rank=4 chr7 . exon 98485 98586 . + . ID=Thaps263051.4;Parent=Thaps263051;constitutive=1;rank=4 chr7 . CDS 98827 100264 . + 0 ID=Thaps263051;Parent=Thaps263051;rank=5 chr7 . exon 98827 100264 . + . ID=Thaps263051.5;Parent=Thaps263051;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 100388 100479 . + 0 ID=Thaps263051;Parent=Thaps263051;rank=6 chr7 . CDS 100572 101400 . + 0 ID=Thaps263051;Parent=Thaps263051;rank=7 chr7 ensembl protein_coding_gene 94153 94848 . - . ID=Thaps35713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP34];external_name=Thaps35713;logic_name=jgi_thaps3 chr7 ensembl transcript 94153 94848 . - . ID=Thaps35713;Parent=Thaps35713;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 94153 94497 . - 0 ID=Thaps35713;Parent=Thaps35713;rank=3 chr7 . exon 94153 94497 . - . ID=Thaps35713.3;Parent=Thaps35713;constitutive=1;rank=3 chr7 . CDS 94594 94666 . - 0 ID=Thaps35713;Parent=Thaps35713;rank=2 chr7 . exon 94594 94666 . - . ID=Thaps35713.2;Parent=Thaps35713;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 94730 94848 . - 0 ID=Thaps35713;Parent=Thaps35713;rank=1 chr7 . exon 94730 94848 . - . ID=Thaps35713.1;Parent=Thaps35713;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 90614 91231 . + . ID=Thaps6639;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP32];external_name=Thaps6639;logic_name=jgi_thaps3 chr7 ensembl transcript 90614 91231 . + . ID=Thaps6639;Parent=Thaps6639;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 90614 91231 . + 0 ID=Thaps6639;Parent=Thaps6639;rank=1 chr7 . exon 90614 91231 . + . ID=Thaps6639.1;Parent=Thaps6639;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 92481 93629 . - . ID=Thaps6640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP33];external_name=Thaps6640;logic_name=jgi_thaps3 chr7 ensembl transcript 92481 93629 . - . ID=Thaps6640;Parent=Thaps6640;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 92481 93629 . - 0 ID=Thaps6640;Parent=Thaps6640;rank=1 chr7 . exon 92481 93629 . - . ID=Thaps6640.1;Parent=Thaps6640;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 95826 97631 . - . ID=Thaps6642;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP35];external_name=Thaps6642;logic_name=jgi_thaps3 chr7 ensembl transcript 95826 97631 . - . ID=Thaps6642;Parent=Thaps6642;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 95826 97631 . - 0 ID=Thaps6642;Parent=Thaps6642;rank=1 chr7 . exon 95826 97631 . - . ID=Thaps6642.1;Parent=Thaps6642;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 102966 104062 . + . ID=Thaps15007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP37];external_name=Thaps15007;logic_name=jgi_thaps3 chr7 ensembl transcript 102966 104062 . + . ID=Thaps15007;Parent=Thaps15007;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 102966 103222 . + 0 ID=Thaps15007;Parent=Thaps15007;rank=1 chr7 . exon 102966 103222 . + . ID=Thaps15007.1;Parent=Thaps15007;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 103308 103450 . + 0 ID=Thaps15007;Parent=Thaps15007;rank=2 chr7 . exon 103308 103450 . + . ID=Thaps15007.2;Parent=Thaps15007;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 103490 103878 . + 0 ID=Thaps15007;Parent=Thaps15007;rank=3 chr7 . exon 103490 103878 . + . ID=Thaps15007.3;Parent=Thaps15007;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 103970 104062 . + 0 ID=Thaps15007;Parent=Thaps15007;rank=4 chr7 . exon 103970 104062 . + . ID=Thaps15007.4;Parent=Thaps15007;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 106431 107126 . - . ID=Thaps17039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP39];external_name=Thaps17039;logic_name=jgi_thaps3 chr7 ensembl transcript 106431 107126 . - . ID=Thaps17039;Parent=Thaps17039;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 106431 107126 . - 0 ID=Thaps17039;Parent=Thaps17039;rank=1 chr7 . exon 106431 107126 . - . ID=Thaps17039.1;Parent=Thaps17039;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 109267 111438 . + . ID=Thaps23335;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP41];external_name=Thaps23335;logic_name=jgi_thaps3 chr7 ensembl transcript 109267 111438 . + . ID=Thaps23335;Parent=Thaps23335;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 109267 109614 . + 0 ID=Thaps23335;Parent=Thaps23335;rank=1 chr7 . exon 109267 109614 . + . ID=Thaps23335.1;Parent=Thaps23335;constitutive=1;rank=1 chr7 . CDS 109765 110754 . + 0 ID=Thaps23335;Parent=Thaps23335;rank=2 chr7 . CDS 110815 111438 . + 0 ID=Thaps23335;Parent=Thaps23335;rank=3 chr7 . exon 100388 100479 . + . ID=Thaps263051.6;Parent=Thaps263051;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . exon 100572 101400 . + . ID=Thaps263051.7;Parent=Thaps263051;constitutive=1;ensembl_end_phase=1;rank=7 chr7 ensembl protein_coding_gene 104407 104987 . - . ID=Thaps263053;biotype=protein_coding;description=Sec14-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP38];external_name=Thaps263053;logic_name=jgi_thaps3 chr7 ensembl transcript 104407 104987 . - . ID=Thaps263053;Parent=Thaps263053;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 104407 104987 . - 0 ID=Thaps263053;Parent=Thaps263053;rank=1 chr7 . exon 104407 104987 . - . ID=Thaps263053.1;Parent=Thaps263053;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 107836 108764 . - . ID=Thaps6645;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP40];external_name=Thaps6645;logic_name=jgi_thaps3 chr7 ensembl transcript 107836 108764 . - . ID=Thaps6645;Parent=Thaps6645;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 107836 108043 . - 0 ID=Thaps6645;Parent=Thaps6645;rank=2 chr7 . exon 107836 108043 . - . ID=Thaps6645.2;Parent=Thaps6645;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 108241 108764 . - 0 ID=Thaps6645;Parent=Thaps6645;rank=1 chr7 . exon 108241 108764 . - . ID=Thaps6645.1;Parent=Thaps6645;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . repeat_region 111607 111741 . + . description=TE2_TP chr7 . repeat_region 114305 114312 . ? . description=dust chr7 . repeat_region 115434 115479 . ? . description=dust chr7 . exon 109765 110754 . + . ID=Thaps23335.2;Parent=Thaps23335;constitutive=1;rank=2 chr7 . exon 110815 111438 . + . ID=Thaps23335.3;Parent=Thaps23335;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 112245 114198 . + . ID=Thaps23336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP42];external_name=Thaps23336;logic_name=jgi_thaps3 chr7 ensembl transcript 112245 114198 . + . ID=Thaps23336;Parent=Thaps23336;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 112245 113045 . + 0 ID=Thaps23336;Parent=Thaps23336;rank=1 chr7 . exon 112245 113045 . + . ID=Thaps23336.1;Parent=Thaps23336;constitutive=1;rank=1 chr7 . CDS 113143 114198 . + 0 ID=Thaps23336;Parent=Thaps23336;rank=2 chr7 . exon 113143 114198 . + . ID=Thaps23336.2;Parent=Thaps23336;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 114410 115600 . - . ID=Thaps6648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP43];external_name=Thaps6648;logic_name=jgi_thaps3 chr7 ensembl transcript 114410 115600 . - . ID=Thaps6648;Parent=Thaps6648;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 114410 114838 . - 0 ID=Thaps6648;Parent=Thaps6648;rank=3 chr7 . exon 114410 114838 . - . ID=Thaps6648.3;Parent=Thaps6648;constitutive=1;rank=3 chr7 . CDS 115338 115517 . - 0 ID=Thaps6648;Parent=Thaps6648;rank=2 chr7 . exon 115338 115517 . - . ID=Thaps6648.2;Parent=Thaps6648;constitutive=1;rank=2 chr7 . CDS 115598 115600 . - 0 ID=Thaps6648;Parent=Thaps6648;rank=1 chr7 . exon 115598 115600 . - . ID=Thaps6648.1;Parent=Thaps6648;constitutive=1;rank=1 chr7 . repeat_region 119673 119924 . ? . description=trf chr7 . repeat_region 126692 126740 . ? . description=trf chr7 ensembl protein_coding_gene 121587 123765 . + . ID=Thaps13175;biotype=protein_coding;description=ABC transporter%2C ATP binding protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP44];external_name=Thaps13175;logic_name=jgi_thaps3 chr7 ensembl transcript 121587 123765 . + . ID=Thaps13175;Parent=Thaps13175;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 121587 121855 . + 0 ID=Thaps13175;Parent=Thaps13175;rank=1 chr7 . exon 121587 121855 . + . ID=Thaps13175.1;Parent=Thaps13175;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 121910 122391 . + 0 ID=Thaps13175;Parent=Thaps13175;rank=2 chr7 . exon 121910 122391 . + . ID=Thaps13175.2;Parent=Thaps13175;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 122496 122568 . + 0 ID=Thaps13175;Parent=Thaps13175;rank=3 chr7 . exon 122496 122568 . + . ID=Thaps13175.3;Parent=Thaps13175;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 122658 122762 . + 0 ID=Thaps13175;Parent=Thaps13175;rank=4 chr7 . exon 122658 122762 . + . ID=Thaps13175.4;Parent=Thaps13175;constitutive=1;rank=4 chr7 . CDS 122907 123201 . + 0 ID=Thaps13175;Parent=Thaps13175;rank=5 chr7 . exon 122907 123201 . + . ID=Thaps13175.5;Parent=Thaps13175;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 123286 123352 . + 0 ID=Thaps13175;Parent=Thaps13175;rank=6 chr7 . exon 123286 123352 . + . ID=Thaps13175.6;Parent=Thaps13175;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . CDS 123431 123765 . + 0 ID=Thaps13175;Parent=Thaps13175;rank=7 chr7 . exon 123431 123765 . + . ID=Thaps13175.7;Parent=Thaps13175;constitutive=1;ensembl_end_phase=2;rank=7 chr7 ensembl protein_coding_gene 127521 129572 . - . ID=Thaps23337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP47];external_name=Thaps23337;logic_name=jgi_thaps3 chr7 ensembl transcript 127521 129572 . - . ID=Thaps23337;Parent=Thaps23337;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 127521 128790 . - 0 ID=Thaps23337;Parent=Thaps23337;rank=5 chr7 . exon 127521 128790 . - . ID=Thaps23337.5;Parent=Thaps23337;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 128867 129037 . - 0 ID=Thaps23337;Parent=Thaps23337;rank=4 chr7 . exon 128867 129037 . - . ID=Thaps23337.4;Parent=Thaps23337;constitutive=1;rank=4 chr7 . CDS 129096 129218 . - 0 ID=Thaps23337;Parent=Thaps23337;rank=3 chr7 . exon 129096 129218 . - . ID=Thaps23337.3;Parent=Thaps23337;constitutive=1;rank=3 chr7 . CDS 129260 129447 . - 0 ID=Thaps23337;Parent=Thaps23337;rank=2 chr7 . exon 129260 129447 . - . ID=Thaps23337.2;Parent=Thaps23337;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 129477 129572 . - 0 ID=Thaps23337;Parent=Thaps23337;rank=1 chr7 . exon 129477 129572 . - . ID=Thaps23337.1;Parent=Thaps23337;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 123910 125943 . - . ID=Thaps6651;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP45];external_name=Thaps6651;logic_name=jgi_thaps3 chr7 ensembl transcript 123910 125943 . - . ID=Thaps6651;Parent=Thaps6651;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 123910 124567 . - 0 ID=Thaps6651;Parent=Thaps6651;rank=4 chr7 . exon 123910 124567 . - . ID=Thaps6651.4;Parent=Thaps6651;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 124685 124810 . - 0 ID=Thaps6651;Parent=Thaps6651;rank=3 chr7 . exon 124685 124810 . - . ID=Thaps6651.3;Parent=Thaps6651;constitutive=1;rank=3 chr7 . CDS 124880 125700 . - 0 ID=Thaps6651;Parent=Thaps6651;rank=2 chr7 . exon 124880 125700 . - . ID=Thaps6651.2;Parent=Thaps6651;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 125860 125943 . - 0 ID=Thaps6651;Parent=Thaps6651;rank=1 chr7 . exon 125860 125943 . - . ID=Thaps6651.1;Parent=Thaps6651;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 126417 127175 . + . ID=Thaps6652;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP46];external_name=Thaps6652;logic_name=jgi_thaps3 chr7 ensembl transcript 126417 127175 . + . ID=Thaps6652;Parent=Thaps6652;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 126417 127175 . + 0 ID=Thaps6652;Parent=Thaps6652;rank=1 chr7 . exon 126417 127175 . + . ID=Thaps6652.1;Parent=Thaps6652;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 129989 132127 . + . ID=Thaps23338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP48];external_name=Thaps23338;logic_name=jgi_thaps3 chr7 ensembl transcript 129989 132127 . + . ID=Thaps23338;Parent=Thaps23338;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 129989 132127 . + 0 ID=Thaps23338;Parent=Thaps23338;rank=1 chr7 . exon 129989 132127 . + . ID=Thaps23338.1;Parent=Thaps23338;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 133576 134928 . + . ID=Thaps6655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP49];external_name=Thaps6655;logic_name=jgi_thaps3 chr7 ensembl transcript 133576 134928 . + . ID=Thaps6655;Parent=Thaps6655;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 133576 134928 . + 0 ID=Thaps6655;Parent=Thaps6655;rank=1 chr7 . exon 133576 134928 . + . ID=Thaps6655.1;Parent=Thaps6655;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 135160 140270 . + . ID=Thaps6656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP50];external_name=Thaps6656;logic_name=jgi_thaps3 chr7 ensembl transcript 135160 140270 . + . ID=Thaps6656;Parent=Thaps6656;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 135160 135297 . + 0 ID=Thaps6656;Parent=Thaps6656;rank=1 chr7 . exon 135160 135297 . + . ID=Thaps6656.1;Parent=Thaps6656;constitutive=1;rank=1 chr7 . CDS 135436 135807 . + 0 ID=Thaps6656;Parent=Thaps6656;rank=2 chr7 . exon 135436 135807 . + . ID=Thaps6656.2;Parent=Thaps6656;constitutive=1;rank=2 chr7 . CDS 135936 136641 . + 0 ID=Thaps6656;Parent=Thaps6656;rank=3 chr7 . exon 135936 136641 . + . ID=Thaps6656.3;Parent=Thaps6656;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 136725 136843 . + 0 ID=Thaps6656;Parent=Thaps6656;rank=4 chr7 . exon 136725 136843 . + . ID=Thaps6656.4;Parent=Thaps6656;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 136893 138665 . + 0 ID=Thaps6656;Parent=Thaps6656;rank=5 chr7 . exon 136893 138665 . + . ID=Thaps6656.5;Parent=Thaps6656;constitutive=1;rank=5 chr7 . CDS 138856 139029 . + 0 ID=Thaps6656;Parent=Thaps6656;rank=6 chr7 . exon 138856 139029 . + . ID=Thaps6656.6;Parent=Thaps6656;constitutive=1;rank=6 chr7 . CDS 139114 139509 . + 0 ID=Thaps6656;Parent=Thaps6656;rank=7 chr7 . exon 139114 139509 . + . ID=Thaps6656.7;Parent=Thaps6656;constitutive=1;rank=7 chr7 . CDS 139650 140270 . + 0 ID=Thaps6656;Parent=Thaps6656;rank=8 chr7 . repeat_region 140532 140669 . - . description=TE2c_TP chr7 . repeat_region 141677 141727 . ? . description=dust chr7 . repeat_region 142391 142398 . ? . description=dust chr7 . repeat_region 143224 143251 . ? . description=trf chr7 . repeat_region 143224 143251 . ? . description=dust chr7 . repeat_region 143814 143846 . ? . description=trf chr7 . repeat_region 143814 143846 . ? . description=dust chr7 . repeat_region 146458 146476 . ? . description=dust chr7 . repeat_region 147341 147355 . ? . description=dust chr7 . repeat_region 147617 147640 . ? . description=trf chr7 . repeat_region 147617 147640 . ? . description=dust chr7 . exon 139650 140270 . + . ID=Thaps6656.8;Parent=Thaps6656;constitutive=1;rank=8 chr7 ensembl protein_coding_gene 140810 141833 . + . ID=Thaps6657;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP51];external_name=Thaps6657;logic_name=jgi_thaps3 chr7 ensembl transcript 140810 141833 . + . ID=Thaps6657;Parent=Thaps6657;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 140810 140937 . + 0 ID=Thaps6657;Parent=Thaps6657;rank=1 chr7 . exon 140810 140937 . + . ID=Thaps6657.1;Parent=Thaps6657;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 141070 141191 . + 0 ID=Thaps6657;Parent=Thaps6657;rank=2 chr7 . exon 141070 141191 . + . ID=Thaps6657.2;Parent=Thaps6657;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 141283 141833 . + 0 ID=Thaps6657;Parent=Thaps6657;rank=3 chr7 . exon 141283 141833 . + . ID=Thaps6657.3;Parent=Thaps6657;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 145168 146432 . - . ID=Thaps6658;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP52];external_name=Thaps6658;logic_name=jgi_thaps3 chr7 ensembl transcript 145168 146432 . - . ID=Thaps6658;Parent=Thaps6658;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 145168 145467 . - 0 ID=Thaps6658;Parent=Thaps6658;rank=3 chr7 . exon 145168 145467 . - . ID=Thaps6658.3;Parent=Thaps6658;constitutive=1;rank=3 chr7 . CDS 145633 145682 . - 0 ID=Thaps6658;Parent=Thaps6658;rank=2 chr7 . exon 145633 145682 . - . ID=Thaps6658.2;Parent=Thaps6658;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 145844 146432 . - 0 ID=Thaps6658;Parent=Thaps6658;rank=1 chr7 . exon 145844 146432 . - . ID=Thaps6658.1;Parent=Thaps6658;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 146763 148943 . + . ID=Thaps6659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP53];external_name=Thaps6659;logic_name=jgi_thaps3 chr7 ensembl transcript 146763 148943 . + . ID=Thaps6659;Parent=Thaps6659;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 146763 148943 . + 0 ID=Thaps6659;Parent=Thaps6659;rank=1 chr7 . exon 146763 148943 . + . ID=Thaps6659.1;Parent=Thaps6659;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 153938 156617 . + . ID=Thaps23339;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP56];external_name=Thaps23339;logic_name=jgi_thaps3 chr7 ensembl transcript 153938 156617 . + . ID=Thaps23339;Parent=Thaps23339;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 153938 154047 . + 0 ID=Thaps23339;Parent=Thaps23339;rank=1 chr7 . exon 153938 154047 . + . ID=Thaps23339.1;Parent=Thaps23339;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 154156 156535 . + 0 ID=Thaps23339;Parent=Thaps23339;rank=2 chr7 . exon 154156 156535 . + . ID=Thaps23339.2;Parent=Thaps23339;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 156600 156617 . + 0 ID=Thaps23339;Parent=Thaps23339;rank=3 chr7 . exon 156600 156617 . + . ID=Thaps23339.3;Parent=Thaps23339;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 150505 151090 . + . ID=Thaps263057;biotype=protein_coding;description=Fucosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B5YP54];external_name=Thaps263057;logic_name=jgi_thaps3 chr7 ensembl transcript 150505 151090 . + . ID=Thaps263057;Parent=Thaps263057;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 150505 151090 . + 0 ID=Thaps263057;Parent=Thaps263057;rank=1 chr7 . exon 150505 151090 . + . ID=Thaps263057.1;Parent=Thaps263057;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 151394 153616 . - . ID=Thaps6661;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP55];external_name=Thaps6661;logic_name=jgi_thaps3 chr7 ensembl transcript 151394 153616 . - . ID=Thaps6661;Parent=Thaps6661;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 151394 153616 . - 0 ID=Thaps6661;Parent=Thaps6661;rank=1 chr7 . exon 151394 153616 . - . ID=Thaps6661.1;Parent=Thaps6661;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 157461 158466 . + . ID=Thaps6663;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP57];external_name=Thaps6663;logic_name=jgi_thaps3 chr7 ensembl transcript 157461 158466 . + . ID=Thaps6663;Parent=Thaps6663;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 157461 157668 . + 0 ID=Thaps6663;Parent=Thaps6663;rank=1 chr7 . exon 157461 157668 . + . ID=Thaps6663.1;Parent=Thaps6663;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 157757 158466 . + 0 ID=Thaps6663;Parent=Thaps6663;rank=2 chr7 . exon 157757 158466 . + . ID=Thaps6663.2;Parent=Thaps6663;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 159087 159686 . - . ID=Thaps6664;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP58];external_name=Thaps6664;logic_name=jgi_thaps3 chr7 ensembl transcript 159087 159686 . - . ID=Thaps6664;Parent=Thaps6664;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 159087 159686 . - 0 ID=Thaps6664;Parent=Thaps6664;rank=1 chr7 . exon 159087 159686 . - . ID=Thaps6664.1;Parent=Thaps6664;constitutive=1;rank=1 chr7 . repeat_region 161294 161325 . ? . description=trf chr7 ensembl protein_coding_gene 165505 167625 . - . ID=Thaps23340;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP60];external_name=Thaps23340;logic_name=jgi_thaps3 chr7 ensembl transcript 165505 167625 . - . ID=Thaps23340;Parent=Thaps23340;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 165505 167625 . - 0 ID=Thaps23340;Parent=Thaps23340;rank=1 chr7 . exon 165505 167625 . - . ID=Thaps23340.1;Parent=Thaps23340;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 160224 164154 . - . ID=Thaps6665;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP59];external_name=Thaps6665;logic_name=jgi_thaps3 chr7 ensembl transcript 160224 164154 . - . ID=Thaps6665;Parent=Thaps6665;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 160224 160670 . - 0 ID=Thaps6665;Parent=Thaps6665;rank=6 chr7 . exon 160224 160670 . - . ID=Thaps6665.6;Parent=Thaps6665;constitutive=1;rank=6 chr7 . CDS 160751 161224 . - 0 ID=Thaps6665;Parent=Thaps6665;rank=5 chr7 . exon 160751 161224 . - . ID=Thaps6665.5;Parent=Thaps6665;constitutive=1;rank=5 chr7 . CDS 161464 161696 . - 0 ID=Thaps6665;Parent=Thaps6665;rank=4 chr7 . exon 161464 161696 . - . ID=Thaps6665.4;Parent=Thaps6665;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 161782 162007 . - 0 ID=Thaps6665;Parent=Thaps6665;rank=3 chr7 . exon 161782 162007 . - . ID=Thaps6665.3;Parent=Thaps6665;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 162227 163024 . - 0 ID=Thaps6665;Parent=Thaps6665;rank=2 chr7 . exon 162227 163024 . - . ID=Thaps6665.2;Parent=Thaps6665;constitutive=1;rank=2 chr7 . CDS 163129 164154 . - 0 ID=Thaps6665;Parent=Thaps6665;rank=1 chr7 . exon 163129 164154 . - . ID=Thaps6665.1;Parent=Thaps6665;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 168118 169653 . + . ID=Thaps6667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP61];external_name=Thaps6667;logic_name=jgi_thaps3 chr7 ensembl transcript 168118 169653 . + . ID=Thaps6667;Parent=Thaps6667;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 168118 169653 . + 0 ID=Thaps6667;Parent=Thaps6667;rank=1 chr7 . exon 168118 169653 . + . ID=Thaps6667.1;Parent=Thaps6667;constitutive=1;rank=1 chr7 . repeat_region 171325 171375 . ? . description=dust chr7 . repeat_region 176148 176155 . ? . description=dust chr7 ensembl protein_coding_gene 172035 172900 . + . ID=Thaps23341;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP63];external_name=Thaps23341;logic_name=jgi_thaps3 chr7 ensembl transcript 172035 172900 . + . ID=Thaps23341;Parent=Thaps23341;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 172035 172682 . + 0 ID=Thaps23341;Parent=Thaps23341;rank=1 chr7 . exon 172035 172682 . + . ID=Thaps23341.1;Parent=Thaps23341;constitutive=1;rank=1 chr7 . CDS 172808 172900 . + 0 ID=Thaps23341;Parent=Thaps23341;rank=2 chr7 . exon 172808 172900 . + . ID=Thaps23341.2;Parent=Thaps23341;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 170513 171756 . - . ID=Thaps6668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP62];external_name=Thaps6668;logic_name=jgi_thaps3 chr7 ensembl transcript 170513 171756 . - . ID=Thaps6668;Parent=Thaps6668;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 170513 170940 . - 0 ID=Thaps6668;Parent=Thaps6668;rank=2 chr7 . exon 170513 170940 . - . ID=Thaps6668.2;Parent=Thaps6668;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 171081 171756 . - 0 ID=Thaps6668;Parent=Thaps6668;rank=1 chr7 . exon 171081 171756 . - . ID=Thaps6668.1;Parent=Thaps6668;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 173050 189639 . - . ID=Thaps6670;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP64];external_name=Thaps6670;logic_name=jgi_thaps3 chr7 ensembl transcript 173050 189639 . - . ID=Thaps6670;Parent=Thaps6670;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 173050 173862 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=11 chr7 . exon 173050 173862 . - . ID=Thaps6670.11;Parent=Thaps6670;constitutive=1;rank=11 chr7 . CDS 173940 174057 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=10 chr7 . exon 173940 174057 . - . ID=Thaps6670.10;Parent=Thaps6670;constitutive=1;ensembl_end_phase=1;rank=10 chr7 . CDS 174135 174498 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=9 chr7 . exon 174135 174498 . - . ID=Thaps6670.9;Parent=Thaps6670;constitutive=1;ensembl_end_phase=1;rank=9 chr7 . CDS 174626 176241 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=8 chr7 . exon 174626 176241 . - . ID=Thaps6670.8;Parent=Thaps6670;constitutive=1;ensembl_end_phase=2;rank=8 chr7 . CDS 176313 176643 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=7 chr7 . exon 176313 176643 . - . ID=Thaps6670.7;Parent=Thaps6670;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . CDS 176758 179747 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=6 chr7 . exon 176758 179747 . - . ID=Thaps6670.6;Parent=Thaps6670;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . CDS 179831 182093 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=5 chr7 . CDS 182187 183007 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=4 chr7 . CDS 183422 184279 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=3 chr7 . CDS 184354 184496 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=2 chr7 . CDS 184843 189639 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=1 chr7 . exon 179831 182093 . - . ID=Thaps6670.5;Parent=Thaps6670;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . exon 182187 183007 . - . ID=Thaps6670.4;Parent=Thaps6670;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . exon 183422 184279 . - . ID=Thaps6670.3;Parent=Thaps6670;constitutive=1;rank=3 chr7 . exon 184354 184496 . - . ID=Thaps6670.2;Parent=Thaps6670;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 184843 189639 . - . ID=Thaps6670.1;Parent=Thaps6670;constitutive=1;rank=1 chr7 . repeat_region 189444 189466 . ? . description=trf chr7 . repeat_region 189444 189466 . ? . description=dust chr7 . repeat_region 189782 189789 . ? . description=dust chr7 . repeat_region 190537 190568 . ? . description=trf chr7 . repeat_region 191790 191822 . ? . description=dust chr7 . repeat_region 191792 191822 . ? . description=trf chr7 ensembl protein_coding_gene 192883 193982 . + . ID=Thaps35501;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP65];external_name=Thaps35501;logic_name=jgi_thaps3 chr7 ensembl transcript 192883 193982 . + . ID=Thaps35501;Parent=Thaps35501;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 192883 193770 . + 0 ID=Thaps35501;Parent=Thaps35501;rank=1 chr7 . exon 192883 193770 . + . ID=Thaps35501.1;Parent=Thaps35501;constitutive=1;rank=1 chr7 . CDS 193854 193982 . + 0 ID=Thaps35501;Parent=Thaps35501;rank=2 chr7 . exon 193854 193982 . + . ID=Thaps35501.2;Parent=Thaps35501;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 173050 189639 . - . ID=Thaps6670;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP64];external_name=Thaps6670;logic_name=jgi_thaps3 chr7 ensembl transcript 173050 189639 . - . ID=Thaps6670;Parent=Thaps6670;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 173050 173862 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=11 chr7 . CDS 173940 174057 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=10 chr7 . CDS 174135 174498 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=9 chr7 . CDS 174626 176241 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=8 chr7 . CDS 176313 176643 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=7 chr7 . CDS 176758 179747 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=6 chr7 . CDS 179831 182093 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=5 chr7 . CDS 182187 183007 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=4 chr7 . CDS 183422 184279 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=3 chr7 . CDS 184354 184496 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=2 chr7 . CDS 184843 189639 . - 0 ID=Thaps6670;Parent=Thaps6670;rank=1 chr7 ensembl protein_coding_gene 198947 199893 . + . ID=Thaps6672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP66];external_name=Thaps6672;logic_name=jgi_thaps3 chr7 ensembl transcript 198947 199893 . + . ID=Thaps6672;Parent=Thaps6672;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 198947 199525 . + 0 ID=Thaps6672;Parent=Thaps6672;rank=1 chr7 . exon 198947 199525 . + . ID=Thaps6672.1;Parent=Thaps6672;constitutive=1;rank=1 chr7 . CDS 199690 199893 . + 0 ID=Thaps6672;Parent=Thaps6672;rank=2 chr7 ensembl protein_coding_gene 202437 203048 . + . ID=Thaps23343;biotype=protein_coding;description=SAM domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP68];external_name=Thaps23343;logic_name=jgi_thaps3 chr7 ensembl transcript 202437 203048 . + . ID=Thaps23343;Parent=Thaps23343;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 202437 203048 . + 0 ID=Thaps23343;Parent=Thaps23343;rank=1 chr7 . exon 202437 203048 . + . ID=Thaps23343.1;Parent=Thaps23343;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 203332 204927 . + . ID=Thaps23344;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP69];external_name=Thaps23344;logic_name=jgi_thaps3 chr7 ensembl transcript 203332 204927 . + . ID=Thaps23344;Parent=Thaps23344;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 203332 204927 . + 0 ID=Thaps23344;Parent=Thaps23344;rank=1 chr7 . exon 203332 204927 . + . ID=Thaps23344.1;Parent=Thaps23344;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 205615 206483 . + . ID=Thaps23345;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP70];external_name=Thaps23345;logic_name=jgi_thaps3 chr7 ensembl transcript 205615 206483 . + . ID=Thaps23345;Parent=Thaps23345;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 205615 205714 . + 0 ID=Thaps23345;Parent=Thaps23345;rank=1 chr7 . exon 205615 205714 . + . ID=Thaps23345.1;Parent=Thaps23345;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 205807 206483 . + 0 ID=Thaps23345;Parent=Thaps23345;rank=2 chr7 . exon 205807 206483 . + . ID=Thaps23345.2;Parent=Thaps23345;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 206641 207007 . - . ID=Thaps263061;biotype=protein_coding;description=Iron superoxide dismutase [Source:UniProtKB/TrEMBL%3BAcc:B5YP71];external_name=Thaps263061;logic_name=jgi_thaps3 chr7 ensembl transcript 206641 207007 . - . ID=Thaps263061;Parent=Thaps263061;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 206641 206826 . - 0 ID=Thaps263061;Parent=Thaps263061;rank=2 chr7 . exon 206641 206826 . - . ID=Thaps263061.2;Parent=Thaps263061;constitutive=1;rank=2 chr7 . CDS 206919 207007 . - 0 ID=Thaps263061;Parent=Thaps263061;rank=1 chr7 . exon 206919 207007 . - . ID=Thaps263061.1;Parent=Thaps263061;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 207549 208789 . + . ID=Thaps263062;biotype=protein_coding;description=Superoxide dismutase [Source:UniProtKB/TrEMBL%3BAcc:B5YP72];external_name=Thaps263062;logic_name=jgi_thaps3 chr7 ensembl transcript 207549 208789 . + . ID=Thaps263062;Parent=Thaps263062;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 207549 207703 . + 0 ID=Thaps263062;Parent=Thaps263062;rank=1 chr7 . exon 207549 207703 . + . ID=Thaps263062.1;Parent=Thaps263062;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 208185 208597 . + 0 ID=Thaps263062;Parent=Thaps263062;rank=2 chr7 . exon 208185 208597 . + . ID=Thaps263062.2;Parent=Thaps263062;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 208674 208789 . + 0 ID=Thaps263062;Parent=Thaps263062;rank=3 chr7 . exon 208674 208789 . + . ID=Thaps263062.3;Parent=Thaps263062;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 199690 199893 . + . ID=Thaps6672.2;Parent=Thaps6672;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 200272 201870 . - . ID=Thaps6673;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP67];external_name=Thaps6673;logic_name=jgi_thaps3 chr7 ensembl transcript 200272 201870 . - . ID=Thaps6673;Parent=Thaps6673;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 200272 201484 . - 0 ID=Thaps6673;Parent=Thaps6673;rank=2 chr7 . exon 200272 201484 . - . ID=Thaps6673.2;Parent=Thaps6673;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 201575 201870 . - 0 ID=Thaps6673;Parent=Thaps6673;rank=1 chr7 . exon 201575 201870 . - . ID=Thaps6673.1;Parent=Thaps6673;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 209184 212337 . + . ID=Thaps6678;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP73];external_name=Thaps6678;logic_name=jgi_thaps3 chr7 ensembl transcript 209184 212337 . + . ID=Thaps6678;Parent=Thaps6678;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 209184 211156 . + 0 ID=Thaps6678;Parent=Thaps6678;rank=1 chr7 . exon 209184 211156 . + . ID=Thaps6678.1;Parent=Thaps6678;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 211250 211979 . + 0 ID=Thaps6678;Parent=Thaps6678;rank=2 chr7 . CDS 212017 212337 . + 0 ID=Thaps6678;Parent=Thaps6678;rank=3 chr7 ensembl protein_coding_gene 212927 216978 . + . ID=Thaps23346;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP74];external_name=Thaps23346;logic_name=jgi_thaps3 chr7 ensembl transcript 212927 216978 . + . ID=Thaps23346;Parent=Thaps23346;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 212927 213152 . + 0 ID=Thaps23346;Parent=Thaps23346;rank=1 chr7 . exon 212927 213152 . + . ID=Thaps23346.1;Parent=Thaps23346;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 213289 216086 . + 0 ID=Thaps23346;Parent=Thaps23346;rank=2 chr7 . exon 213289 216086 . + . ID=Thaps23346.2;Parent=Thaps23346;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 216167 216381 . + 0 ID=Thaps23346;Parent=Thaps23346;rank=3 chr7 . exon 216167 216381 . + . ID=Thaps23346.3;Parent=Thaps23346;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 216468 216978 . + 0 ID=Thaps23346;Parent=Thaps23346;rank=4 chr7 . exon 216468 216978 . + . ID=Thaps23346.4;Parent=Thaps23346;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . exon 211250 211979 . + . ID=Thaps6678.2;Parent=Thaps6678;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 212017 212337 . + . ID=Thaps6678.3;Parent=Thaps6678;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 217077 218261 . - . ID=Thaps6680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP75];external_name=Thaps6680;logic_name=jgi_thaps3 chr7 ensembl transcript 217077 218261 . - . ID=Thaps6680;Parent=Thaps6680;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 217077 218261 . - 0 ID=Thaps6680;Parent=Thaps6680;rank=1 chr7 . exon 217077 218261 . - . ID=Thaps6680.1;Parent=Thaps6680;constitutive=1;rank=1 chr7 . repeat_region 220159 220178 . ? . description=trf chr7 . repeat_region 220159 220178 . ? . description=dust chr7 ensembl protein_coding_gene 221710 223140 . + . ID=Thaps35373;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP77];external_name=Thaps35373;logic_name=jgi_thaps3 chr7 ensembl transcript 221710 223140 . + . ID=Thaps35373;Parent=Thaps35373;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 221710 222793 . + 0 ID=Thaps35373;Parent=Thaps35373;rank=1 chr7 . exon 221710 222793 . + . ID=Thaps35373.1;Parent=Thaps35373;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 222920 223140 . + 0 ID=Thaps35373;Parent=Thaps35373;rank=2 chr7 . exon 222920 223140 . + . ID=Thaps35373.2;Parent=Thaps35373;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 219246 219992 . - . ID=Thaps6681;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP76];external_name=Thaps6681;logic_name=jgi_thaps3 chr7 ensembl transcript 219246 219992 . - . ID=Thaps6681;Parent=Thaps6681;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 219246 219613 . - 0 ID=Thaps6681;Parent=Thaps6681;rank=2 chr7 . exon 219246 219613 . - . ID=Thaps6681.2;Parent=Thaps6681;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 219659 219992 . - 0 ID=Thaps6681;Parent=Thaps6681;rank=1 chr7 . exon 219659 219992 . - . ID=Thaps6681.1;Parent=Thaps6681;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 224387 227945 . + . ID=Thaps6683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP78];external_name=Thaps6683;logic_name=jgi_thaps3 chr7 ensembl transcript 224387 227945 . + . ID=Thaps6683;Parent=Thaps6683;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 224387 224573 . + 0 ID=Thaps6683;Parent=Thaps6683;rank=1 chr7 . exon 224387 224573 . + . ID=Thaps6683.1;Parent=Thaps6683;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 224761 226159 . + 0 ID=Thaps6683;Parent=Thaps6683;rank=2 chr7 . exon 224761 226159 . + . ID=Thaps6683.2;Parent=Thaps6683;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 226536 226617 . + 0 ID=Thaps6683;Parent=Thaps6683;rank=3 chr7 . exon 226536 226617 . + . ID=Thaps6683.3;Parent=Thaps6683;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 226786 227574 . + 0 ID=Thaps6683;Parent=Thaps6683;rank=4 chr7 . exon 226786 227574 . + . ID=Thaps6683.4;Parent=Thaps6683;constitutive=1;rank=4 chr7 . CDS 227751 227945 . + 0 ID=Thaps6683;Parent=Thaps6683;rank=5 chr7 . exon 227751 227945 . + . ID=Thaps6683.5;Parent=Thaps6683;constitutive=1;rank=5 chr7 ensembl protein_coding_gene 228250 230656 . - . ID=Thaps6684;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP79];external_name=Thaps6684;logic_name=jgi_thaps3 chr7 ensembl transcript 228250 230656 . - . ID=Thaps6684;Parent=Thaps6684;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 228250 229328 . - 0 ID=Thaps6684;Parent=Thaps6684;rank=2 chr7 . exon 228250 229328 . - . ID=Thaps6684.2;Parent=Thaps6684;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 229423 230656 . - 0 ID=Thaps6684;Parent=Thaps6684;rank=1 chr7 ensembl protein_coding_gene 231591 232391 . + . ID=Thaps14242;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP80];external_name=Thaps14242;logic_name=jgi_thaps3 chr7 ensembl transcript 231591 232391 . + . ID=Thaps14242;Parent=Thaps14242;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 231591 232391 . + 0 ID=Thaps14242;Parent=Thaps14242;rank=1 chr7 . exon 231591 232391 . + . ID=Thaps14242.1;Parent=Thaps14242;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 234828 235724 . - . ID=Thaps23347;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP82];external_name=Thaps23347;logic_name=jgi_thaps3 chr7 ensembl transcript 234828 235724 . - . ID=Thaps23347;Parent=Thaps23347;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 234828 235724 . - 0 ID=Thaps23347;Parent=Thaps23347;rank=1 chr7 . exon 234828 235724 . - . ID=Thaps23347.1;Parent=Thaps23347;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 238053 239196 . - . ID=Thaps263067;biotype=protein_coding;description=Protein kinase MAPKKKK%2C MAP4K-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP84];external_name=Thaps263067;logic_name=jgi_thaps3 chr7 ensembl transcript 238053 239196 . - . ID=Thaps263067;Parent=Thaps263067;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 238053 238573 . - 0 ID=Thaps263067;Parent=Thaps263067;rank=3 chr7 . exon 238053 238573 . - . ID=Thaps263067.3;Parent=Thaps263067;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 238703 238849 . - 0 ID=Thaps263067;Parent=Thaps263067;rank=2 chr7 . exon 238703 238849 . - . ID=Thaps263067.2;Parent=Thaps263067;constitutive=1;rank=2 chr7 . CDS 239151 239196 . - 0 ID=Thaps263067;Parent=Thaps263067;rank=1 chr7 ensembl protein_coding_gene 236401 237240 . + . ID=Thaps269199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP83];external_name=Thaps269199;logic_name=jgi_thaps3 chr7 ensembl transcript 236401 237240 . + . ID=Thaps269199;Parent=Thaps269199;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 236401 236572 . + 0 ID=Thaps269199;Parent=Thaps269199;rank=1 chr7 . exon 236401 236572 . + . ID=Thaps269199.1;Parent=Thaps269199;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 236648 237067 . + 0 ID=Thaps269199;Parent=Thaps269199;rank=2 chr7 . exon 236648 237067 . + . ID=Thaps269199.2;Parent=Thaps269199;constitutive=1;rank=2 chr7 . CDS 237101 237240 . + 0 ID=Thaps269199;Parent=Thaps269199;rank=3 chr7 . exon 237101 237240 . + . ID=Thaps269199.3;Parent=Thaps269199;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 229423 230656 . - . ID=Thaps6684.1;Parent=Thaps6684;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 232899 233642 . - . ID=Thaps6686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP81];external_name=Thaps6686;logic_name=jgi_thaps3 chr7 ensembl transcript 232899 233642 . - . ID=Thaps6686;Parent=Thaps6686;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 232899 233208 . - 0 ID=Thaps6686;Parent=Thaps6686;rank=2 chr7 . exon 232899 233208 . - . ID=Thaps6686.2;Parent=Thaps6686;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 233299 233642 . - 0 ID=Thaps6686;Parent=Thaps6686;rank=1 chr7 . exon 233299 233642 . - . ID=Thaps6686.1;Parent=Thaps6686;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . repeat_region 244444 244451 . ? . description=dust chr7 . repeat_region 248029 248037 . ? . description=dust chr7 . repeat_region 248438 248446 . ? . description=dust chr7 ensembl protein_coding_gene 249038 249602 . + . ID=Thaps19298;biotype=protein_coding;description=F-type H-ATPase delta subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YP89];external_name=Thaps19298;logic_name=jgi_thaps3 chr7 ensembl transcript 249038 249602 . + . ID=Thaps19298;Parent=Thaps19298;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 249038 249304 . + 0 ID=Thaps19298;Parent=Thaps19298;rank=1 chr7 . exon 249038 249304 . + . ID=Thaps19298.1;Parent=Thaps19298;constitutive=1;rank=1 chr7 . CDS 249459 249602 . + 0 ID=Thaps19298;Parent=Thaps19298;rank=2 chr7 ensembl protein_coding_gene 241588 242742 . - . ID=Thaps23350;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP85];external_name=Thaps23350;logic_name=jgi_thaps3 chr7 ensembl transcript 241588 242742 . - . ID=Thaps23350;Parent=Thaps23350;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 241588 242742 . - 0 ID=Thaps23350;Parent=Thaps23350;rank=1 chr7 . exon 241588 242742 . - . ID=Thaps23350.1;Parent=Thaps23350;constitutive=1;rank=1 chr7 . exon 239151 239196 . - . ID=Thaps263067.1;Parent=Thaps263067;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 246633 248729 . - . ID=Thaps41256;biotype=protein_coding;description=ATP synthase subunit beta [Source:UniProtKB/TrEMBL%3BAcc:B5YP88];external_name=Thaps41256;logic_name=jgi_thaps3 chr7 ensembl transcript 246633 248729 . - . ID=Thaps41256;Parent=Thaps41256;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 246633 248015 . - 0 ID=Thaps41256;Parent=Thaps41256;rank=3 chr7 . exon 246633 248015 . - . ID=Thaps41256.3;Parent=Thaps41256;constitutive=1;rank=3 chr7 . CDS 248142 248230 . - 0 ID=Thaps41256;Parent=Thaps41256;rank=2 chr7 . exon 248142 248230 . - . ID=Thaps41256.2;Parent=Thaps41256;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 248699 248729 . - 0 ID=Thaps41256;Parent=Thaps41256;rank=1 chr7 . exon 248699 248729 . - . ID=Thaps41256.1;Parent=Thaps41256;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 242904 244244 . - . ID=Thaps6692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP86];external_name=Thaps6692;logic_name=jgi_thaps3 chr7 ensembl transcript 242904 244244 . - . ID=Thaps6692;Parent=Thaps6692;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 242904 244244 . - 0 ID=Thaps6692;Parent=Thaps6692;rank=1 chr7 . exon 242904 244244 . - . ID=Thaps6692.1;Parent=Thaps6692;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 244884 246158 . + . ID=Thaps6693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP87];external_name=Thaps6693;logic_name=jgi_thaps3 chr7 ensembl transcript 244884 246158 . + . ID=Thaps6693;Parent=Thaps6693;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 244884 246158 . + 0 ID=Thaps6693;Parent=Thaps6693;rank=1 chr7 . exon 244884 246158 . + . ID=Thaps6693.1;Parent=Thaps6693;constitutive=1;rank=1 chr7 . exon 249459 249602 . + . ID=Thaps19298.2;Parent=Thaps19298;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 250352 252655 . - . ID=Thaps23354;biotype=protein_coding;description=RNA-binding protein of the pumilio family [Source:UniProtKB/TrEMBL%3BAcc:B5YP90];external_name=Thaps23354;logic_name=jgi_thaps3 chr7 ensembl transcript 250352 252655 . - . ID=Thaps23354;Parent=Thaps23354;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 250352 251791 . - 0 ID=Thaps23354;Parent=Thaps23354;rank=2 chr7 . exon 250352 251791 . - . ID=Thaps23354.2;Parent=Thaps23354;constitutive=1;rank=2 chr7 . CDS 252095 252655 . - 0 ID=Thaps23354;Parent=Thaps23354;rank=1 chr7 . exon 252095 252655 . - . ID=Thaps23354.1;Parent=Thaps23354;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 257454 259230 . + . ID=Thaps263072;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP93];external_name=Thaps263072;logic_name=jgi_thaps3 chr7 ensembl transcript 257454 259230 . + . ID=Thaps263072;Parent=Thaps263072;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 257454 257588 . + 0 ID=Thaps263072;Parent=Thaps263072;rank=1 chr7 . exon 257454 257588 . + . ID=Thaps263072.1;Parent=Thaps263072;constitutive=1;rank=1 chr7 . CDS 257709 258318 . + 0 ID=Thaps263072;Parent=Thaps263072;rank=2 chr7 . exon 257709 258318 . + . ID=Thaps263072.2;Parent=Thaps263072;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 258487 258984 . + 0 ID=Thaps263072;Parent=Thaps263072;rank=3 chr7 . exon 258487 258984 . + . ID=Thaps263072.3;Parent=Thaps263072;constitutive=1;rank=3 chr7 . CDS 259042 259230 . + 0 ID=Thaps263072;Parent=Thaps263072;rank=4 chr7 ensembl protein_coding_gene 253110 254404 . - . ID=Thaps6698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP91];external_name=Thaps6698;logic_name=jgi_thaps3 chr7 ensembl transcript 253110 254404 . - . ID=Thaps6698;Parent=Thaps6698;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 253110 253180 . - 0 ID=Thaps6698;Parent=Thaps6698;rank=3 chr7 . exon 253110 253180 . - . ID=Thaps6698.3;Parent=Thaps6698;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 253314 253644 . - 0 ID=Thaps6698;Parent=Thaps6698;rank=2 chr7 . exon 253314 253644 . - . ID=Thaps6698.2;Parent=Thaps6698;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 253733 254404 . - 0 ID=Thaps6698;Parent=Thaps6698;rank=1 chr7 . exon 253733 254404 . - . ID=Thaps6698.1;Parent=Thaps6698;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 254825 255580 . + . ID=Thaps6699;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP92];external_name=Thaps6699;logic_name=jgi_thaps3 chr7 ensembl transcript 254825 255580 . + . ID=Thaps6699;Parent=Thaps6699;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 254825 255580 . + 0 ID=Thaps6699;Parent=Thaps6699;rank=1 chr7 . exon 254825 255580 . + . ID=Thaps6699.1;Parent=Thaps6699;constitutive=1;rank=1 chr7 . repeat_region 261618 262309 . + . description=RTE1_TP chr7 . repeat_region 262785 262792 . ? . description=dust chr7 . repeat_region 263303 263349 . ? . description=trf chr7 . repeat_region 266199 266207 . ? . description=dust chr7 . repeat_region 266861 266924 . ? . description=dust chr7 . repeat_region 267171 267201 . ? . description=trf chr7 . repeat_region 268203 268254 . ? . description=trf chr7 ensembl protein_coding_gene 262535 263628 . + . ID=Thaps23356;biotype=protein_coding;description=Dehydroascorbate reductase and valine--tRNA ligase-like protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP95];external_name=Thaps23356;logic_name=jgi_thaps3 chr7 ensembl transcript 262535 263628 . + . ID=Thaps23356;Parent=Thaps23356;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 262535 262766 . + 0 ID=Thaps23356;Parent=Thaps23356;rank=1 chr7 . exon 262535 262766 . + . ID=Thaps23356.1;Parent=Thaps23356;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 262952 263628 . + 0 ID=Thaps23356;Parent=Thaps23356;rank=2 chr7 . exon 262952 263628 . + . ID=Thaps23356.2;Parent=Thaps23356;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 259042 259230 . + . ID=Thaps263072.4;Parent=Thaps263072;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 259674 260782 . - . ID=Thaps6701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP94];external_name=Thaps6701;logic_name=jgi_thaps3 chr7 ensembl transcript 259674 260782 . - . ID=Thaps6701;Parent=Thaps6701;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 259674 259678 . - 0 ID=Thaps6701;Parent=Thaps6701;rank=3 chr7 . exon 259674 259678 . - . ID=Thaps6701.3;Parent=Thaps6701;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 259777 260182 . - 0 ID=Thaps6701;Parent=Thaps6701;rank=2 chr7 . exon 259777 260182 . - . ID=Thaps6701.2;Parent=Thaps6701;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 260351 260782 . - 0 ID=Thaps6701;Parent=Thaps6701;rank=1 chr7 . exon 260351 260782 . - . ID=Thaps6701.1;Parent=Thaps6701;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 264840 265277 . + . ID=Thaps6703;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP96];external_name=Thaps6703;logic_name=jgi_thaps3 chr7 ensembl transcript 264840 265277 . + . ID=Thaps6703;Parent=Thaps6703;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 264840 265277 . + 0 ID=Thaps6703;Parent=Thaps6703;rank=1 chr7 . exon 264840 265277 . + . ID=Thaps6703.1;Parent=Thaps6703;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 266036 266734 . - . ID=Thaps6704;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP97];external_name=Thaps6704;logic_name=jgi_thaps3 chr7 ensembl transcript 266036 266734 . - . ID=Thaps6704;Parent=Thaps6704;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 266036 266212 . - 0 ID=Thaps6704;Parent=Thaps6704;rank=3 chr7 . exon 266036 266212 . - . ID=Thaps6704.3;Parent=Thaps6704;constitutive=1;rank=3 chr7 . CDS 266255 266401 . - 0 ID=Thaps6704;Parent=Thaps6704;rank=2 chr7 . exon 266255 266401 . - . ID=Thaps6704.2;Parent=Thaps6704;constitutive=1;rank=2 chr7 . CDS 266516 266734 . - 0 ID=Thaps6704;Parent=Thaps6704;rank=1 chr7 . exon 266516 266734 . - . ID=Thaps6704.1;Parent=Thaps6704;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 270304 273387 . - . ID=Thaps6705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP98];external_name=Thaps6705;logic_name=jgi_thaps3 chr7 ensembl transcript 270304 273387 . - . ID=Thaps6705;Parent=Thaps6705;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 270304 271291 . - 0 ID=Thaps6705;Parent=Thaps6705;rank=6 chr7 . exon 270304 271291 . - . ID=Thaps6705.6;Parent=Thaps6705;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . CDS 271418 271616 . - 0 ID=Thaps6705;Parent=Thaps6705;rank=5 chr7 . exon 271418 271616 . - . ID=Thaps6705.5;Parent=Thaps6705;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 271766 271985 . - 0 ID=Thaps6705;Parent=Thaps6705;rank=4 chr7 . exon 271766 271985 . - . ID=Thaps6705.4;Parent=Thaps6705;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 272278 272939 . - 0 ID=Thaps6705;Parent=Thaps6705;rank=3 chr7 . exon 272278 272939 . - . ID=Thaps6705.3;Parent=Thaps6705;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 272998 273035 . - 0 ID=Thaps6705;Parent=Thaps6705;rank=2 chr7 . exon 272998 273035 . - . ID=Thaps6705.2;Parent=Thaps6705;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 273239 273387 . - 0 ID=Thaps6705;Parent=Thaps6705;rank=1 chr7 . exon 273239 273387 . - . ID=Thaps6705.1;Parent=Thaps6705;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 274665 275958 . - . ID=Thaps6706;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP99];external_name=Thaps6706;logic_name=jgi_thaps3 chr7 ensembl transcript 274665 275958 . - . ID=Thaps6706;Parent=Thaps6706;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 274665 275854 . - 0 ID=Thaps6706;Parent=Thaps6706;rank=2 chr7 . exon 274665 275854 . - . ID=Thaps6706.2;Parent=Thaps6706;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 275952 275958 . - 0 ID=Thaps6706;Parent=Thaps6706;rank=1 chr7 . exon 275952 275958 . - . ID=Thaps6706.1;Parent=Thaps6706;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 282348 282355 . ? . description=dust chr7 . repeat_region 284275 284282 . ? . description=dust chr7 ensembl protein_coding_gene 285779 286615 . + . ID=Thaps263074;biotype=protein_coding;description=Synaptobrevin [Source:UniProtKB/TrEMBL%3BAcc:B5YPA2];external_name=Thaps263074;logic_name=jgi_thaps3 chr7 ensembl transcript 285779 286615 . + . ID=Thaps263074;Parent=Thaps263074;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 285779 285895 . + 0 ID=Thaps263074;Parent=Thaps263074;rank=1 chr7 . exon 285779 285895 . + . ID=Thaps263074.1;Parent=Thaps263074;constitutive=1;rank=1 chr7 . CDS 286029 286055 . + 0 ID=Thaps263074;Parent=Thaps263074;rank=2 chr7 . exon 286029 286055 . + . ID=Thaps263074.2;Parent=Thaps263074;constitutive=1;rank=2 chr7 . CDS 286100 286615 . + 0 ID=Thaps263074;Parent=Thaps263074;rank=3 chr7 . exon 286100 286615 . + . ID=Thaps263074.3;Parent=Thaps263074;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 283109 283975 . - . ID=Thaps35668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPA0];external_name=Thaps35668;logic_name=jgi_thaps3 chr7 ensembl transcript 283109 283975 . - . ID=Thaps35668;Parent=Thaps35668;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 283109 283975 . - 0 ID=Thaps35668;Parent=Thaps35668;rank=1 chr7 . exon 283109 283975 . - . ID=Thaps35668.1;Parent=Thaps35668;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 284428 285432 . + . ID=Thaps6708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPA1];external_name=Thaps6708;logic_name=jgi_thaps3 chr7 ensembl transcript 284428 285432 . + . ID=Thaps6708;Parent=Thaps6708;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 284428 285432 . + 0 ID=Thaps6708;Parent=Thaps6708;rank=1 chr7 . exon 284428 285432 . + . ID=Thaps6708.1;Parent=Thaps6708;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 286793 288293 . - . ID=Thaps6710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPA3];external_name=Thaps6710;logic_name=jgi_thaps3 chr7 ensembl transcript 286793 288293 . - . ID=Thaps6710;Parent=Thaps6710;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 286793 286800 . - 0 ID=Thaps6710;Parent=Thaps6710;rank=4 chr7 . exon 286793 286800 . - . ID=Thaps6710.4;Parent=Thaps6710;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 286859 287362 . - 0 ID=Thaps6710;Parent=Thaps6710;rank=3 chr7 . exon 286859 287362 . - . ID=Thaps6710.3;Parent=Thaps6710;constitutive=1;rank=3 chr7 . CDS 287451 287556 . - 0 ID=Thaps6710;Parent=Thaps6710;rank=2 chr7 . exon 287451 287556 . - . ID=Thaps6710.2;Parent=Thaps6710;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 287682 288293 . - 0 ID=Thaps6710;Parent=Thaps6710;rank=1 chr7 . exon 287682 288293 . - . ID=Thaps6710.1;Parent=Thaps6710;constitutive=1;rank=1 chr7 . repeat_region 298689 298718 . ? . description=trf chr7 ensembl protein_coding_gene 291762 292657 . - . ID=Thaps23357;biotype=protein_coding;description=Possibly a phosphatase from the CbbY protein family [Source:UniProtKB/TrEMBL%3BAcc:B5YPA5];external_name=Thaps23357;logic_name=jgi_thaps3 chr7 ensembl transcript 291762 292657 . - . ID=Thaps23357;Parent=Thaps23357;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 291762 292419 . - 0 ID=Thaps23357;Parent=Thaps23357;rank=2 chr7 . exon 291762 292419 . - . ID=Thaps23357.2;Parent=Thaps23357;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 292491 292657 . - 0 ID=Thaps23357;Parent=Thaps23357;rank=1 chr7 . exon 292491 292657 . - . ID=Thaps23357.1;Parent=Thaps23357;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 293030 293770 . + . ID=Thaps35408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPA6];external_name=Thaps35408;logic_name=jgi_thaps3 chr7 ensembl transcript 293030 293770 . + . ID=Thaps35408;Parent=Thaps35408;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 293030 293408 . + 0 ID=Thaps35408;Parent=Thaps35408;rank=1 chr7 . exon 293030 293408 . + . ID=Thaps35408.1;Parent=Thaps35408;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 293505 293770 . + 0 ID=Thaps35408;Parent=Thaps35408;rank=2 chr7 . exon 293505 293770 . + . ID=Thaps35408.2;Parent=Thaps35408;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 290845 291579 . + . ID=Thaps6711;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPA4];external_name=Thaps6711;logic_name=jgi_thaps3 chr7 ensembl transcript 290845 291579 . + . ID=Thaps6711;Parent=Thaps6711;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 290845 291579 . + 0 ID=Thaps6711;Parent=Thaps6711;rank=1 chr7 . exon 290845 291579 . + . ID=Thaps6711.1;Parent=Thaps6711;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 294505 295581 . + . ID=Thaps6714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPA7];external_name=Thaps6714;logic_name=jgi_thaps3 chr7 ensembl transcript 294505 295581 . + . ID=Thaps6714;Parent=Thaps6714;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 294505 295581 . + 0 ID=Thaps6714;Parent=Thaps6714;rank=1 chr7 . exon 294505 295581 . + . ID=Thaps6714.1;Parent=Thaps6714;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 295643 304083 . - . ID=Thaps6715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPA8];external_name=Thaps6715;logic_name=jgi_thaps3 chr7 ensembl transcript 295643 304083 . - . ID=Thaps6715;Parent=Thaps6715;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 295643 296787 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=21 chr7 . exon 295643 296787 . - . ID=Thaps6715.21;Parent=Thaps6715;constitutive=1;ensembl_end_phase=2;rank=21 chr7 . CDS 297109 297222 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=20 chr7 . exon 297109 297222 . - . ID=Thaps6715.20;Parent=Thaps6715;constitutive=1;rank=20 chr7 . CDS 297313 298126 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=19 chr7 . exon 297313 298126 . - . ID=Thaps6715.19;Parent=Thaps6715;constitutive=1;ensembl_end_phase=1;rank=19 chr7 . CDS 298213 298234 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=18 chr7 . exon 298213 298234 . - . ID=Thaps6715.18;Parent=Thaps6715;constitutive=1;ensembl_end_phase=1;rank=18 chr7 . CDS 298324 298373 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=17 chr7 . exon 298324 298373 . - . ID=Thaps6715.17;Parent=Thaps6715;constitutive=1;ensembl_end_phase=2;rank=17 chr7 . CDS 298458 298541 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=16 chr7 . exon 298458 298541 . - . ID=Thaps6715.16;Parent=Thaps6715;constitutive=1;rank=16 chr7 . CDS 298622 299012 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=15 chr7 . exon 298622 299012 . - . ID=Thaps6715.15;Parent=Thaps6715;constitutive=1;ensembl_end_phase=1;rank=15 chr7 . CDS 299094 299122 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=14 chr7 . CDS 299224 299700 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=13 chr7 . CDS 299772 299925 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=12 chr7 . CDS 300065 300270 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=11 chr7 . CDS 300350 300452 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=10 chr7 . CDS 300528 300634 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=9 chr7 . CDS 300667 300722 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=8 chr7 . CDS 300762 300933 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=7 chr7 . CDS 301006 301496 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=6 chr7 . CDS 301580 301681 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=5 chr7 . CDS 301758 303027 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=4 chr7 . CDS 303107 303361 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=3 chr7 . CDS 303455 303635 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=2 chr7 . CDS 303737 304083 . - 0 ID=Thaps6715;Parent=Thaps6715;rank=1 chr7 . repeat_region 304199 304206 . ? . description=dust chr7 . repeat_region 305188 305207 . ? . description=dust chr7 . repeat_region 305389 305419 . ? . description=dust chr7 ensembl protein_coding_gene 307995 310064 . - . ID=Thaps23359;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPB0];external_name=Thaps23359;logic_name=jgi_thaps3 chr7 ensembl transcript 307995 310064 . - . ID=Thaps23359;Parent=Thaps23359;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 307995 310064 . - 0 ID=Thaps23359;Parent=Thaps23359;rank=1 chr7 . exon 307995 310064 . - . ID=Thaps23359.1;Parent=Thaps23359;constitutive=1;rank=1 chr7 . exon 299094 299122 . - . ID=Thaps6715.14;Parent=Thaps6715;constitutive=1;ensembl_end_phase=2;rank=14 chr7 . exon 299224 299700 . - . ID=Thaps6715.13;Parent=Thaps6715;constitutive=1;rank=13 chr7 . exon 299772 299925 . - . ID=Thaps6715.12;Parent=Thaps6715;constitutive=1;ensembl_end_phase=1;rank=12 chr7 . exon 300065 300270 . - . ID=Thaps6715.11;Parent=Thaps6715;constitutive=1;ensembl_end_phase=2;rank=11 chr7 . exon 300350 300452 . - . ID=Thaps6715.10;Parent=Thaps6715;constitutive=1;ensembl_end_phase=1;rank=10 chr7 . exon 300528 300634 . - . ID=Thaps6715.9;Parent=Thaps6715;constitutive=1;ensembl_end_phase=2;rank=9 chr7 . exon 300667 300722 . - . ID=Thaps6715.8;Parent=Thaps6715;constitutive=1;ensembl_end_phase=2;rank=8 chr7 . exon 300762 300933 . - . ID=Thaps6715.7;Parent=Thaps6715;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . exon 301006 301496 . - . ID=Thaps6715.6;Parent=Thaps6715;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . exon 301580 301681 . - . ID=Thaps6715.5;Parent=Thaps6715;constitutive=1;rank=5 chr7 . exon 301758 303027 . - . ID=Thaps6715.4;Parent=Thaps6715;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . exon 303107 303361 . - . ID=Thaps6715.3;Parent=Thaps6715;constitutive=1;rank=3 chr7 . exon 303455 303635 . - . ID=Thaps6715.2;Parent=Thaps6715;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 303737 304083 . - . ID=Thaps6715.1;Parent=Thaps6715;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 306167 307611 . - . ID=Thaps6716;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPA9];external_name=Thaps6716;logic_name=jgi_thaps3 chr7 ensembl transcript 306167 307611 . - . ID=Thaps6716;Parent=Thaps6716;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 306167 307010 . - 0 ID=Thaps6716;Parent=Thaps6716;rank=2 chr7 . exon 306167 307010 . - . ID=Thaps6716.2;Parent=Thaps6716;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 307172 307611 . - 0 ID=Thaps6716;Parent=Thaps6716;rank=1 chr7 . exon 307172 307611 . - . ID=Thaps6716.1;Parent=Thaps6716;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . repeat_region 310240 310287 . ? . description=trf chr7 ensembl protein_coding_gene 311952 312932 . - . ID=Thaps35409;biotype=protein_coding;description=Cytochrome C peroxidase [Source:UniProtKB/TrEMBL%3BAcc:B5YMA2];external_name=Thaps35409;logic_name=jgi_thaps3 chr7 ensembl transcript 311952 312932 . - . ID=Thaps35409;Parent=Thaps35409;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 311952 312450 . - 0 ID=Thaps35409;Parent=Thaps35409;rank=3 chr7 . exon 311952 312450 . - . ID=Thaps35409.3;Parent=Thaps35409;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 312534 312576 . - 0 ID=Thaps35409;Parent=Thaps35409;rank=2 chr7 . exon 312534 312576 . - . ID=Thaps35409.2;Parent=Thaps35409;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 312665 312932 . - 0 ID=Thaps35409;Parent=Thaps35409;rank=1 chr7 . exon 312665 312932 . - . ID=Thaps35409.1;Parent=Thaps35409;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 311475 311849 . + . ID=Thaps6718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YPB1];external_name=Thaps6718;logic_name=jgi_thaps3 chr7 ensembl transcript 311475 311849 . + . ID=Thaps6718;Parent=Thaps6718;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 311475 311849 . + 0 ID=Thaps6718;Parent=Thaps6718;rank=1 chr7 . exon 311475 311849 . + . ID=Thaps6718.1;Parent=Thaps6718;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 313390 316049 . - . ID=Thaps6720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMA3];external_name=Thaps6720;logic_name=jgi_thaps3 chr7 ensembl transcript 313390 316049 . - . ID=Thaps6720;Parent=Thaps6720;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 313390 313609 . - 0 ID=Thaps6720;Parent=Thaps6720;rank=3 chr7 . exon 313390 313609 . - . ID=Thaps6720.3;Parent=Thaps6720;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 313707 314459 . - 0 ID=Thaps6720;Parent=Thaps6720;rank=2 chr7 . exon 313707 314459 . - . ID=Thaps6720.2;Parent=Thaps6720;constitutive=1;rank=2 chr7 . CDS 314539 316049 . - 0 ID=Thaps6720;Parent=Thaps6720;rank=1 chr7 . exon 314539 316049 . - . ID=Thaps6720.1;Parent=Thaps6720;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 316595 320038 . - . ID=Thaps6721;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMA4];external_name=Thaps6721;logic_name=jgi_thaps3 chr7 ensembl transcript 316595 320038 . - . ID=Thaps6721;Parent=Thaps6721;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 316595 317097 . - 0 ID=Thaps6721;Parent=Thaps6721;rank=5 chr7 . exon 316595 317097 . - . ID=Thaps6721.5;Parent=Thaps6721;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 317193 318805 . - 0 ID=Thaps6721;Parent=Thaps6721;rank=4 chr7 . exon 317193 318805 . - . ID=Thaps6721.4;Parent=Thaps6721;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 318912 319021 . - 0 ID=Thaps6721;Parent=Thaps6721;rank=3 chr7 . CDS 319115 319873 . - 0 ID=Thaps6721;Parent=Thaps6721;rank=2 chr7 . CDS 319913 320038 . - 0 ID=Thaps6721;Parent=Thaps6721;rank=1 chr7 ensembl protein_coding_gene 325651 326448 . - . ID=Thaps16082;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMA7];external_name=Thaps16082;logic_name=jgi_thaps3 chr7 ensembl transcript 325651 326448 . - . ID=Thaps16082;Parent=Thaps16082;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 325651 326448 . - 0 ID=Thaps16082;Parent=Thaps16082;rank=1 chr7 . exon 325651 326448 . - . ID=Thaps16082.1;Parent=Thaps16082;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 327869 330713 . - . ID=Thaps23361;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMA8];external_name=Thaps23361;logic_name=jgi_thaps3 chr7 ensembl transcript 327869 330713 . - . ID=Thaps23361;Parent=Thaps23361;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 327869 328320 . - 0 ID=Thaps23361;Parent=Thaps23361;rank=3 chr7 . exon 327869 328320 . - . ID=Thaps23361.3;Parent=Thaps23361;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 328404 330574 . - 0 ID=Thaps23361;Parent=Thaps23361;rank=2 chr7 . exon 328404 330574 . - . ID=Thaps23361.2;Parent=Thaps23361;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 330673 330713 . - 0 ID=Thaps23361;Parent=Thaps23361;rank=1 chr7 . exon 318912 319021 . - . ID=Thaps6721.3;Parent=Thaps6721;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 319115 319873 . - . ID=Thaps6721.2;Parent=Thaps6721;constitutive=1;rank=2 chr7 . exon 319913 320038 . - . ID=Thaps6721.1;Parent=Thaps6721;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 320998 323011 . + . ID=Thaps6722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMA5];external_name=Thaps6722;logic_name=jgi_thaps3 chr7 ensembl transcript 320998 323011 . + . ID=Thaps6722;Parent=Thaps6722;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 320998 322242 . + 0 ID=Thaps6722;Parent=Thaps6722;rank=1 chr7 . exon 320998 322242 . + . ID=Thaps6722.1;Parent=Thaps6722;constitutive=1;rank=1 chr7 . CDS 322331 323011 . + 0 ID=Thaps6722;Parent=Thaps6722;rank=2 chr7 . exon 322331 323011 . + . ID=Thaps6722.2;Parent=Thaps6722;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 324086 325135 . + . ID=Thaps6723;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMA6];external_name=Thaps6723;logic_name=jgi_thaps3 chr7 ensembl transcript 324086 325135 . + . ID=Thaps6723;Parent=Thaps6723;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 324086 325040 . + 0 ID=Thaps6723;Parent=Thaps6723;rank=1 chr7 . exon 324086 325040 . + . ID=Thaps6723.1;Parent=Thaps6723;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 325077 325135 . + 0 ID=Thaps6723;Parent=Thaps6723;rank=2 chr7 . exon 325077 325135 . + . ID=Thaps6723.2;Parent=Thaps6723;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . repeat_region 337149 337190 . ? . description=dust chr7 . exon 330673 330713 . - . ID=Thaps23361.1;Parent=Thaps23361;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 334860 337520 . - . ID=Thaps23362;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB1];external_name=Thaps23362;logic_name=jgi_thaps3 chr7 ensembl transcript 334860 337520 . - . ID=Thaps23362;Parent=Thaps23362;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 334860 335449 . - 0 ID=Thaps23362;Parent=Thaps23362;rank=3 chr7 . exon 334860 335449 . - . ID=Thaps23362.3;Parent=Thaps23362;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 335692 336829 . - 0 ID=Thaps23362;Parent=Thaps23362;rank=2 chr7 . exon 335692 336829 . - . ID=Thaps23362.2;Parent=Thaps23362;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 336921 337520 . - 0 ID=Thaps23362;Parent=Thaps23362;rank=1 chr7 . exon 336921 337520 . - . ID=Thaps23362.1;Parent=Thaps23362;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 332037 332770 . + . ID=Thaps6726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMA9];external_name=Thaps6726;logic_name=jgi_thaps3 chr7 ensembl transcript 332037 332770 . + . ID=Thaps6726;Parent=Thaps6726;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 332037 332229 . + 0 ID=Thaps6726;Parent=Thaps6726;rank=1 chr7 . exon 332037 332229 . + . ID=Thaps6726.1;Parent=Thaps6726;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 332304 332770 . + 0 ID=Thaps6726;Parent=Thaps6726;rank=2 chr7 . exon 332304 332770 . + . ID=Thaps6726.2;Parent=Thaps6726;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 332998 333944 . - . ID=Thaps6727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB0];external_name=Thaps6727;logic_name=jgi_thaps3 chr7 ensembl transcript 332998 333944 . - . ID=Thaps6727;Parent=Thaps6727;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 332998 333780 . - 0 ID=Thaps6727;Parent=Thaps6727;rank=2 chr7 . exon 332998 333780 . - . ID=Thaps6727.2;Parent=Thaps6727;constitutive=1;rank=2 chr7 . CDS 333885 333944 . - 0 ID=Thaps6727;Parent=Thaps6727;rank=1 chr7 . exon 333885 333944 . - . ID=Thaps6727.1;Parent=Thaps6727;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 338240 340793 . + . ID=Thaps6729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB2];external_name=Thaps6729;logic_name=jgi_thaps3 chr7 ensembl transcript 338240 340793 . + . ID=Thaps6729;Parent=Thaps6729;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 338240 338306 . + 0 ID=Thaps6729;Parent=Thaps6729;rank=1 chr7 . exon 338240 338306 . + . ID=Thaps6729.1;Parent=Thaps6729;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 338374 338949 . + 0 ID=Thaps6729;Parent=Thaps6729;rank=2 chr7 . exon 338374 338949 . + . ID=Thaps6729.2;Parent=Thaps6729;constitutive=1;rank=2 chr7 . CDS 338977 340793 . + 0 ID=Thaps6729;Parent=Thaps6729;rank=3 chr7 ensembl protein_coding_gene 341021 341425 . - . ID=Thaps23363;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB3];external_name=Thaps23363;logic_name=jgi_thaps3 chr7 ensembl transcript 341021 341425 . - . ID=Thaps23363;Parent=Thaps23363;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 341021 341425 . - 0 ID=Thaps23363;Parent=Thaps23363;rank=1 chr7 . exon 341021 341425 . - . ID=Thaps23363.1;Parent=Thaps23363;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 343159 344220 . - . ID=Thaps23364;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB5];external_name=Thaps23364;logic_name=jgi_thaps3 chr7 ensembl transcript 343159 344220 . - . ID=Thaps23364;Parent=Thaps23364;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 343159 344220 . - 0 ID=Thaps23364;Parent=Thaps23364;rank=1 chr7 . exon 343159 344220 . - . ID=Thaps23364.1;Parent=Thaps23364;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 345050 347386 . + . ID=Thaps28865;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB6];external_name=Thaps28865;logic_name=jgi_thaps3 chr7 ensembl transcript 345050 347386 . + . ID=Thaps28865;Parent=Thaps28865;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 345050 346440 . + 0 ID=Thaps28865;Parent=Thaps28865;rank=1 chr7 . exon 345050 346440 . + . ID=Thaps28865.1;Parent=Thaps28865;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 346525 346783 . + 0 ID=Thaps28865;Parent=Thaps28865;rank=2 chr7 . exon 346525 346783 . + . ID=Thaps28865.2;Parent=Thaps28865;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 346853 347386 . + 0 ID=Thaps28865;Parent=Thaps28865;rank=3 chr7 . exon 346853 347386 . + . ID=Thaps28865.3;Parent=Thaps28865;constitutive=1;rank=3 chr7 . exon 338977 340793 . + . ID=Thaps6729.3;Parent=Thaps6729;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 342346 342901 . + . ID=Thaps6731;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB4];external_name=Thaps6731;logic_name=jgi_thaps3 chr7 ensembl transcript 342346 342901 . + . ID=Thaps6731;Parent=Thaps6731;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 342346 342645 . + 0 ID=Thaps6731;Parent=Thaps6731;rank=1 chr7 . exon 342346 342645 . + . ID=Thaps6731.1;Parent=Thaps6731;constitutive=1;rank=1 chr7 . CDS 342731 342901 . + 0 ID=Thaps6731;Parent=Thaps6731;rank=2 chr7 . exon 342731 342901 . + . ID=Thaps6731.2;Parent=Thaps6731;constitutive=1;rank=2 chr7 . repeat_region 349870 349879 . ? . description=dust chr7 . repeat_region 351553 351581 . ? . description=trf chr7 . repeat_region 351553 351581 . ? . description=dust chr7 ensembl protein_coding_gene 358273 361951 . - . ID=Thaps23366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC1];external_name=Thaps23366;logic_name=jgi_thaps3 chr7 ensembl transcript 358273 361951 . - . ID=Thaps23366;Parent=Thaps23366;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 358273 358996 . - 0 ID=Thaps23366;Parent=Thaps23366;rank=3 chr7 . exon 358273 358996 . - . ID=Thaps23366.3;Parent=Thaps23366;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 359086 360652 . - 0 ID=Thaps23366;Parent=Thaps23366;rank=2 chr7 . CDS 360739 361951 . - 0 ID=Thaps23366;Parent=Thaps23366;rank=1 chr7 ensembl protein_coding_gene 355427 358106 . - . ID=Thaps35266;biotype=protein_coding;description=Dynamin GTPase%2C switch/motor protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC0];external_name=DYN1;logic_name=jgi_thaps3 chr7 ensembl transcript 355427 358106 . - . ID=Thaps35266;Parent=Thaps35266;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 355427 355791 . - 0 ID=Thaps35266;Parent=Thaps35266;rank=4 chr7 . exon 355427 355791 . - . ID=Thaps35266.4;Parent=Thaps35266;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 356119 356709 . - 0 ID=Thaps35266;Parent=Thaps35266;rank=3 chr7 . exon 356119 356709 . - . ID=Thaps35266.3;Parent=Thaps35266;constitutive=1;rank=3 chr7 . CDS 356894 357778 . - 0 ID=Thaps35266;Parent=Thaps35266;rank=2 chr7 . exon 356894 357778 . - . ID=Thaps35266.2;Parent=Thaps35266;constitutive=1;rank=2 chr7 . CDS 357890 358106 . - 0 ID=Thaps35266;Parent=Thaps35266;rank=1 chr7 . exon 357890 358106 . - . ID=Thaps35266.1;Parent=Thaps35266;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 348785 352371 . - . ID=Thaps6734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB7];external_name=Thaps6734;logic_name=jgi_thaps3 chr7 ensembl transcript 348785 352371 . - . ID=Thaps6734;Parent=Thaps6734;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 348785 349292 . - 0 ID=Thaps6734;Parent=Thaps6734;rank=4 chr7 . exon 348785 349292 . - . ID=Thaps6734.4;Parent=Thaps6734;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 349374 349866 . - 0 ID=Thaps6734;Parent=Thaps6734;rank=3 chr7 . exon 349374 349866 . - . ID=Thaps6734.3;Parent=Thaps6734;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 349974 350884 . - 0 ID=Thaps6734;Parent=Thaps6734;rank=2 chr7 . exon 349974 350884 . - . ID=Thaps6734.2;Parent=Thaps6734;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 350906 352371 . - 0 ID=Thaps6734;Parent=Thaps6734;rank=1 chr7 . exon 350906 352371 . - . ID=Thaps6734.1;Parent=Thaps6734;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 353127 353657 . + . ID=Thaps6735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB8];external_name=Thaps6735;logic_name=jgi_thaps3 chr7 ensembl transcript 353127 353657 . + . ID=Thaps6735;Parent=Thaps6735;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 353127 353657 . + 0 ID=Thaps6735;Parent=Thaps6735;rank=1 chr7 . exon 353127 353657 . + . ID=Thaps6735.1;Parent=Thaps6735;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 354254 355135 . + . ID=Thaps6736;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMB9];external_name=Thaps6736;logic_name=jgi_thaps3 chr7 ensembl transcript 354254 355135 . + . ID=Thaps6736;Parent=Thaps6736;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 354254 355135 . + 0 ID=Thaps6736;Parent=Thaps6736;rank=1 chr7 . exon 354254 355135 . + . ID=Thaps6736.1;Parent=Thaps6736;constitutive=1;rank=1 chr7 . exon 359086 360652 . - . ID=Thaps23366.2;Parent=Thaps23366;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 360739 361951 . - . ID=Thaps23366.1;Parent=Thaps23366;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 365686 366876 . + . ID=Thaps23368;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC3];external_name=Thaps23368;logic_name=jgi_thaps3 chr7 ensembl transcript 365686 366876 . + . ID=Thaps23368;Parent=Thaps23368;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 365686 366876 . + 0 ID=Thaps23368;Parent=Thaps23368;rank=1 chr7 . exon 365686 366876 . + . ID=Thaps23368.1;Parent=Thaps23368;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 363668 363874 . - . ID=Thaps35230;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC2];external_name=Thaps35230;logic_name=jgi_thaps3 chr7 ensembl transcript 363668 363874 . - . ID=Thaps35230;Parent=Thaps35230;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 363668 363874 . - 0 ID=Thaps35230;Parent=Thaps35230;rank=1 chr7 . exon 363668 363874 . - . ID=Thaps35230.1;Parent=Thaps35230;constitutive=1;rank=1 chr7 . repeat_region 371036 371076 . ? . description=trf chr7 . repeat_region 371475 371495 . ? . description=trf chr7 . repeat_region 371475 371495 . ? . description=dust chr7 . repeat_region 374816 374824 . ? . description=dust chr7 ensembl protein_coding_gene 368831 371194 . - . ID=Thaps23369;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC4];external_name=Thaps23369;logic_name=jgi_thaps3 chr7 ensembl transcript 368831 371194 . - . ID=Thaps23369;Parent=Thaps23369;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 368831 371194 . - 0 ID=Thaps23369;Parent=Thaps23369;rank=1 chr7 . exon 368831 371194 . - . ID=Thaps23369.1;Parent=Thaps23369;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 371710 377326 . + . ID=Thaps23370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC5];external_name=Thaps23370;logic_name=jgi_thaps3 chr7 ensembl transcript 371710 377326 . + . ID=Thaps23370;Parent=Thaps23370;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 371710 373382 . + 0 ID=Thaps23370;Parent=Thaps23370;rank=1 chr7 . exon 371710 373382 . + . ID=Thaps23370.1;Parent=Thaps23370;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 373479 374220 . + 0 ID=Thaps23370;Parent=Thaps23370;rank=2 chr7 . exon 373479 374220 . + . ID=Thaps23370.2;Parent=Thaps23370;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 374295 374508 . + 0 ID=Thaps23370;Parent=Thaps23370;rank=3 chr7 . exon 374295 374508 . + . ID=Thaps23370.3;Parent=Thaps23370;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 374903 374952 . + 0 ID=Thaps23370;Parent=Thaps23370;rank=4 chr7 . exon 374903 374952 . + . ID=Thaps23370.4;Parent=Thaps23370;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 375116 377326 . + 0 ID=Thaps23370;Parent=Thaps23370;rank=5 chr7 . exon 375116 377326 . + . ID=Thaps23370.5;Parent=Thaps23370;constitutive=1;rank=5 chr7 ensembl protein_coding_gene 377606 379243 . - . ID=Thaps6743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC6];external_name=Thaps6743;logic_name=jgi_thaps3 chr7 ensembl transcript 377606 379243 . - . ID=Thaps6743;Parent=Thaps6743;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 377606 379243 . - 0 ID=Thaps6743;Parent=Thaps6743;rank=1 chr7 . exon 377606 379243 . - . ID=Thaps6743.1;Parent=Thaps6743;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 379768 381399 . - . ID=Thaps23371;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC7];external_name=Thaps23371;logic_name=jgi_thaps3 chr7 ensembl transcript 379768 381399 . - . ID=Thaps23371;Parent=Thaps23371;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 379768 381399 . - 0 ID=Thaps23371;Parent=Thaps23371;rank=1 chr7 . exon 379768 381399 . - . ID=Thaps23371.1;Parent=Thaps23371;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 385396 386784 . - . ID=Thaps269210;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC9];external_name=Thaps269210;logic_name=jgi_thaps3 chr7 ensembl transcript 385396 386784 . - . ID=Thaps269210;Parent=Thaps269210;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 385396 385717 . - 0 ID=Thaps269210;Parent=Thaps269210;rank=5 chr7 . exon 385396 385717 . - . ID=Thaps269210.5;Parent=Thaps269210;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 385808 385851 . - 0 ID=Thaps269210;Parent=Thaps269210;rank=4 chr7 . exon 385808 385851 . - . ID=Thaps269210.4;Parent=Thaps269210;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 385885 386100 . - 0 ID=Thaps269210;Parent=Thaps269210;rank=3 chr7 . exon 385885 386100 . - . ID=Thaps269210.3;Parent=Thaps269210;constitutive=1;rank=3 chr7 . CDS 386134 386221 . - 0 ID=Thaps269210;Parent=Thaps269210;rank=2 chr7 . exon 386134 386221 . - . ID=Thaps269210.2;Parent=Thaps269210;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 386357 386784 . - 0 ID=Thaps269210;Parent=Thaps269210;rank=1 chr7 . exon 386357 386784 . - . ID=Thaps269210.1;Parent=Thaps269210;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 387103 388510 . - . ID=Thaps35259;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMD0];external_name=Thaps35259;logic_name=jgi_thaps3 chr7 ensembl transcript 387103 388510 . - . ID=Thaps35259;Parent=Thaps35259;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 387103 387177 . - 0 ID=Thaps35259;Parent=Thaps35259;rank=6 chr7 . exon 387103 387177 . - . ID=Thaps35259.6;Parent=Thaps35259;constitutive=1;rank=6 chr7 . CDS 387232 387332 . - 0 ID=Thaps35259;Parent=Thaps35259;rank=5 chr7 . exon 387232 387332 . - . ID=Thaps35259.5;Parent=Thaps35259;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 387407 387627 . - 0 ID=Thaps35259;Parent=Thaps35259;rank=4 chr7 . exon 387407 387627 . - . ID=Thaps35259.4;Parent=Thaps35259;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 387702 387859 . - 0 ID=Thaps35259;Parent=Thaps35259;rank=3 chr7 . exon 387702 387859 . - . ID=Thaps35259.3;Parent=Thaps35259;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 387938 388101 . - 0 ID=Thaps35259;Parent=Thaps35259;rank=2 chr7 . exon 387938 388101 . - . ID=Thaps35259.2;Parent=Thaps35259;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 388225 388510 . - 0 ID=Thaps35259;Parent=Thaps35259;rank=1 chr7 . exon 388225 388510 . - . ID=Thaps35259.1;Parent=Thaps35259;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 381884 385202 . + . ID=Thaps6745;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMC8];external_name=Thaps6745;logic_name=jgi_thaps3 chr7 ensembl transcript 381884 385202 . + . ID=Thaps6745;Parent=Thaps6745;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 381884 382000 . + 0 ID=Thaps6745;Parent=Thaps6745;rank=1 chr7 . exon 381884 382000 . + . ID=Thaps6745.1;Parent=Thaps6745;constitutive=1;rank=1 chr7 . CDS 382436 385159 . + 0 ID=Thaps6745;Parent=Thaps6745;rank=2 chr7 . exon 382436 385159 . + . ID=Thaps6745.2;Parent=Thaps6745;constitutive=1;rank=2 chr7 . CDS 385191 385202 . + 0 ID=Thaps6745;Parent=Thaps6745;rank=3 chr7 . exon 385191 385202 . + . ID=Thaps6745.3;Parent=Thaps6745;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 389102 390350 . + . ID=Thaps23374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMD1];external_name=Thaps23374;logic_name=jgi_thaps3 chr7 ensembl transcript 389102 390350 . + . ID=Thaps23374;Parent=Thaps23374;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 389102 389265 . + 0 ID=Thaps23374;Parent=Thaps23374;rank=1 chr7 . exon 389102 389265 . + . ID=Thaps23374.1;Parent=Thaps23374;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 389375 389603 . + 0 ID=Thaps23374;Parent=Thaps23374;rank=2 chr7 . exon 389375 389603 . + . ID=Thaps23374.2;Parent=Thaps23374;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 389682 390350 . + 0 ID=Thaps23374;Parent=Thaps23374;rank=3 chr7 . exon 389682 390350 . + . ID=Thaps23374.3;Parent=Thaps23374;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 395106 396915 . + . ID=Thaps23376;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMD4];external_name=Thaps23376;logic_name=jgi_thaps3 chr7 ensembl transcript 395106 396915 . + . ID=Thaps23376;Parent=Thaps23376;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 395106 396237 . + 0 ID=Thaps23376;Parent=Thaps23376;rank=1 chr7 . exon 395106 396237 . + . ID=Thaps23376.1;Parent=Thaps23376;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 396323 396915 . + 0 ID=Thaps23376;Parent=Thaps23376;rank=2 chr7 . exon 396323 396915 . + . ID=Thaps23376.2;Parent=Thaps23376;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 391190 393091 . + . ID=Thaps263081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMD2];external_name=Thaps263081;logic_name=jgi_thaps3 chr7 ensembl transcript 391190 393091 . + . ID=Thaps263081;Parent=Thaps263081;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 391190 391679 . + 0 ID=Thaps263081;Parent=Thaps263081;rank=1 chr7 . exon 391190 391679 . + . ID=Thaps263081.1;Parent=Thaps263081;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 391790 392146 . + 0 ID=Thaps263081;Parent=Thaps263081;rank=2 chr7 . exon 391790 392146 . + . ID=Thaps263081.2;Parent=Thaps263081;constitutive=1;rank=2 chr7 . CDS 392240 393091 . + 0 ID=Thaps263081;Parent=Thaps263081;rank=3 chr7 . exon 392240 393091 . + . ID=Thaps263081.3;Parent=Thaps263081;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 394030 394398 . - . ID=Thaps6750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMD3];external_name=Thaps6750;logic_name=jgi_thaps3 chr7 ensembl transcript 394030 394398 . - . ID=Thaps6750;Parent=Thaps6750;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 394030 394398 . - 0 ID=Thaps6750;Parent=Thaps6750;rank=1 chr7 . exon 394030 394398 . - . ID=Thaps6750.1;Parent=Thaps6750;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 397108 398598 . - . ID=Thaps6752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMD5];external_name=Thaps6752;logic_name=jgi_thaps3 chr7 ensembl transcript 397108 398598 . - . ID=Thaps6752;Parent=Thaps6752;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 397108 398598 . - 0 ID=Thaps6752;Parent=Thaps6752;rank=1 chr7 . exon 397108 398598 . - . ID=Thaps6752.1;Parent=Thaps6752;constitutive=1;rank=1 chr7 . repeat_region 406356 406363 . ? . description=dust chr7 ensembl protein_coding_gene 400657 403761 . - . ID=Thaps23377;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMD8];external_name=Thaps23377;logic_name=jgi_thaps3 chr7 ensembl transcript 400657 403761 . - . ID=Thaps23377;Parent=Thaps23377;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 400657 401457 . - 0 ID=Thaps23377;Parent=Thaps23377;rank=5 chr7 . exon 400657 401457 . - . ID=Thaps23377.5;Parent=Thaps23377;constitutive=1;rank=5 chr7 . CDS 401538 401610 . - 0 ID=Thaps23377;Parent=Thaps23377;rank=4 chr7 . exon 401538 401610 . - . ID=Thaps23377.4;Parent=Thaps23377;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 401854 402619 . - 0 ID=Thaps23377;Parent=Thaps23377;rank=3 chr7 . exon 401854 402619 . - . ID=Thaps23377.3;Parent=Thaps23377;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 402681 402998 . - 0 ID=Thaps23377;Parent=Thaps23377;rank=2 chr7 . exon 402681 402998 . - . ID=Thaps23377.2;Parent=Thaps23377;constitutive=1;rank=2 chr7 . CDS 403113 403761 . - 0 ID=Thaps23377;Parent=Thaps23377;rank=1 chr7 . exon 403113 403761 . - . ID=Thaps23377.1;Parent=Thaps23377;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 404812 406675 . - . ID=Thaps23378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMD9];external_name=Thaps23378;logic_name=jgi_thaps3 chr7 ensembl transcript 404812 406675 . - . ID=Thaps23378;Parent=Thaps23378;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 404812 406281 . - 0 ID=Thaps23378;Parent=Thaps23378;rank=2 chr7 . exon 404812 406281 . - . ID=Thaps23378.2;Parent=Thaps23378;constitutive=1;rank=2 chr7 . CDS 406424 406675 . - 0 ID=Thaps23378;Parent=Thaps23378;rank=1 chr7 . exon 406424 406675 . - . ID=Thaps23378.1;Parent=Thaps23378;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 399089 399597 . - . ID=Thaps35245;biotype=protein_coding;description=Histone H3 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD6];external_name=H3-2;logic_name=jgi_thaps3 chr7 ensembl transcript 399089 399597 . - . ID=Thaps35245;Parent=Thaps35245;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 399089 399386 . - 0 ID=Thaps35245;Parent=Thaps35245;rank=2 chr7 . exon 399089 399386 . - . ID=Thaps35245.2;Parent=Thaps35245;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 399485 399597 . - 0 ID=Thaps35245;Parent=Thaps35245;rank=1 chr7 . exon 399485 399597 . - . ID=Thaps35245.1;Parent=Thaps35245;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 399897 400208 . + . ID=Thaps35330;biotype=protein_coding;description=Histone H4 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD7];external_name=H4_2;logic_name=jgi_thaps3 chr7 ensembl transcript 399897 400208 . + . ID=Thaps35330;Parent=Thaps35330;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 399897 400208 . + 0 ID=Thaps35330;Parent=Thaps35330;rank=1 chr7 . exon 399897 400208 . + . ID=Thaps35330.1;Parent=Thaps35330;constitutive=1;rank=1 chr7 . repeat_region 408858 408882 . ? . description=trf chr7 . repeat_region 416126 416154 . ? . description=trf chr7 ensembl protein_coding_gene 415502 417409 . + . ID=Thaps13378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YME4];external_name=Thaps13378;logic_name=jgi_thaps3 chr7 ensembl transcript 415502 417409 . + . ID=Thaps13378;Parent=Thaps13378;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 415502 415756 . + 0 ID=Thaps13378;Parent=Thaps13378;rank=1 chr7 . exon 415502 415756 . + . ID=Thaps13378.1;Parent=Thaps13378;constitutive=1;rank=1 chr7 . CDS 415814 415918 . + 0 ID=Thaps13378;Parent=Thaps13378;rank=2 chr7 . exon 415814 415918 . + . ID=Thaps13378.2;Parent=Thaps13378;constitutive=1;rank=2 chr7 . CDS 416078 417409 . + 0 ID=Thaps13378;Parent=Thaps13378;rank=3 chr7 . exon 416078 417409 . + . ID=Thaps13378.3;Parent=Thaps13378;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 410080 411522 . - . ID=Thaps23379;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YME1];external_name=Thaps23379;logic_name=jgi_thaps3 chr7 ensembl transcript 410080 411522 . - . ID=Thaps23379;Parent=Thaps23379;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 410080 411522 . - 0 ID=Thaps23379;Parent=Thaps23379;rank=1 chr7 . exon 410080 411522 . - . ID=Thaps23379.1;Parent=Thaps23379;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 417906 418826 . + . ID=Thaps269213;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YME5];external_name=Thaps269213;logic_name=jgi_thaps3 chr7 ensembl transcript 417906 418826 . + . ID=Thaps269213;Parent=Thaps269213;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 417906 418826 . + 0 ID=Thaps269213;Parent=Thaps269213;rank=1 chr7 . exon 417906 418826 . + . ID=Thaps269213.1;Parent=Thaps269213;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 408751 410016 . + . ID=Thaps6757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YME0];external_name=Thaps6757;logic_name=jgi_thaps3 chr7 ensembl transcript 408751 410016 . + . ID=Thaps6757;Parent=Thaps6757;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 408751 410016 . + 0 ID=Thaps6757;Parent=Thaps6757;rank=1 chr7 . exon 408751 410016 . + . ID=Thaps6757.1;Parent=Thaps6757;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 412091 412807 . - . ID=Thaps6759;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YME2];external_name=Thaps6759;logic_name=jgi_thaps3 chr7 ensembl transcript 412091 412807 . - . ID=Thaps6759;Parent=Thaps6759;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 412091 412653 . - 0 ID=Thaps6759;Parent=Thaps6759;rank=2 chr7 . exon 412091 412653 . - . ID=Thaps6759.2;Parent=Thaps6759;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 412720 412807 . - 0 ID=Thaps6759;Parent=Thaps6759;rank=1 chr7 . exon 412720 412807 . - . ID=Thaps6759.1;Parent=Thaps6759;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 413622 414809 . + . ID=Thaps6760;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YME3];external_name=Thaps6760;logic_name=jgi_thaps3 chr7 ensembl transcript 413622 414809 . + . ID=Thaps6760;Parent=Thaps6760;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 413622 414809 . + 0 ID=Thaps6760;Parent=Thaps6760;rank=1 chr7 . exon 413622 414809 . + . ID=Thaps6760.1;Parent=Thaps6760;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 419320 421127 . + . ID=Thaps23381;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YME6];external_name=Thaps23381;logic_name=jgi_thaps3 chr7 ensembl transcript 419320 421127 . + . ID=Thaps23381;Parent=Thaps23381;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 419320 419737 . + 0 ID=Thaps23381;Parent=Thaps23381;rank=1 chr7 . exon 419320 419737 . + . ID=Thaps23381.1;Parent=Thaps23381;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 419825 420177 . + 0 ID=Thaps23381;Parent=Thaps23381;rank=2 chr7 . exon 419825 420177 . + . ID=Thaps23381.2;Parent=Thaps23381;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 420270 421127 . + 0 ID=Thaps23381;Parent=Thaps23381;rank=3 chr7 . exon 420270 421127 . + . ID=Thaps23381.3;Parent=Thaps23381;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 427471 428441 . + . ID=Thaps263089;biotype=protein_coding;description=Breast cancer 2 early onset [Source:UniProtKB/TrEMBL%3BAcc:B5YME7];external_name=BRAC2;logic_name=jgi_thaps3 chr7 ensembl transcript 427471 428441 . + . ID=Thaps263089;Parent=Thaps263089;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 427471 428441 . + 0 ID=Thaps263089;Parent=Thaps263089;rank=1 chr7 . exon 427471 428441 . + . ID=Thaps263089.1;Parent=Thaps263089;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . biological_region 433210 433213 0.999 - . logic_name=eponine chr7 . repeat_region 435291 435338 . ? . description=trf chr7 . repeat_region 435296 435338 . ? . description=dust chr7 . repeat_region 437659 437667 . ? . description=dust chr7 ensembl protein_coding_gene 431633 433207 . + . ID=Thaps6764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YME8];external_name=Thaps6764;logic_name=jgi_thaps3 chr7 ensembl transcript 431633 433207 . + . ID=Thaps6764;Parent=Thaps6764;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 431633 433207 . + 0 ID=Thaps6764;Parent=Thaps6764;rank=1 chr7 . exon 431633 433207 . + . ID=Thaps6764.1;Parent=Thaps6764;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 433382 434891 . + . ID=Thaps6765;biotype=protein_coding;description=HSF33%2C heat shock transcription factor DNA-binding domain-containing protein%2C DNA binding%2C transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B5YME9];external_name=HSF33;logic_name=jgi_thaps3 chr7 ensembl transcript 433382 434891 . + . ID=Thaps6765;Parent=Thaps6765;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 433382 433488 . + 0 ID=Thaps6765;Parent=Thaps6765;rank=1 chr7 . exon 433382 433488 . + . ID=Thaps6765.1;Parent=Thaps6765;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 433645 434147 . + 0 ID=Thaps6765;Parent=Thaps6765;rank=2 chr7 . exon 433645 434147 . + . ID=Thaps6765.2;Parent=Thaps6765;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 434242 434891 . + 0 ID=Thaps6765;Parent=Thaps6765;rank=3 chr7 . exon 434242 434891 . + . ID=Thaps6765.3;Parent=Thaps6765;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 439767 440654 . - . ID=Thaps263092;biotype=protein_coding;description=Subtilisin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B5YMF0];external_name=Thaps263092;logic_name=jgi_thaps3 chr7 ensembl transcript 439767 440654 . - . ID=Thaps263092;Parent=Thaps263092;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 439767 440654 . - 0 ID=Thaps263092;Parent=Thaps263092;rank=1 chr7 . exon 439767 440654 . - . ID=Thaps263092.1;Parent=Thaps263092;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 442215 443099 . + . ID=Thaps35690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMF1];external_name=Thaps35690;logic_name=jgi_thaps3 chr7 ensembl transcript 442215 443099 . + . ID=Thaps35690;Parent=Thaps35690;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 442215 442779 . + 0 ID=Thaps35690;Parent=Thaps35690;rank=1 chr7 . exon 442215 442779 . + . ID=Thaps35690.1;Parent=Thaps35690;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 442834 443099 . + 0 ID=Thaps35690;Parent=Thaps35690;rank=2 chr7 . exon 442834 443099 . + . ID=Thaps35690.2;Parent=Thaps35690;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 444482 448588 . - . ID=Thaps6768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMF2];external_name=Thaps6768;logic_name=jgi_thaps3 chr7 ensembl transcript 444482 448588 . - . ID=Thaps6768;Parent=Thaps6768;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 444482 445174 . - 0 ID=Thaps6768;Parent=Thaps6768;rank=3 chr7 . exon 444482 445174 . - . ID=Thaps6768.3;Parent=Thaps6768;constitutive=1;rank=3 chr7 . CDS 445252 445571 . - 0 ID=Thaps6768;Parent=Thaps6768;rank=2 chr7 . exon 445252 445571 . - . ID=Thaps6768.2;Parent=Thaps6768;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 445651 448588 . - 0 ID=Thaps6768;Parent=Thaps6768;rank=1 chr7 . exon 445651 448588 . - . ID=Thaps6768.1;Parent=Thaps6768;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 456179 456200 . ? . description=trf chr7 . repeat_region 456179 456200 . ? . description=dust chr7 . repeat_region 456513 456520 . ? . description=dust chr7 ensembl protein_coding_gene 450731 451446 . - . ID=Thaps263096;biotype=protein_coding;description=Chitinase [Source:UniProtKB/TrEMBL%3BAcc:B5YMF3];external_name=Thaps263096;logic_name=jgi_thaps3 chr7 ensembl transcript 450731 451446 . - . ID=Thaps263096;Parent=Thaps263096;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 450731 450859 . - 0 ID=Thaps263096;Parent=Thaps263096;rank=4 chr7 . exon 450731 450859 . - . ID=Thaps263096.4;Parent=Thaps263096;constitutive=1;rank=4 chr7 . CDS 450936 451040 . - 0 ID=Thaps263096;Parent=Thaps263096;rank=3 chr7 . exon 450936 451040 . - . ID=Thaps263096.3;Parent=Thaps263096;constitutive=1;rank=3 chr7 . CDS 451129 451152 . - 0 ID=Thaps263096;Parent=Thaps263096;rank=2 chr7 . exon 451129 451152 . - . ID=Thaps263096.2;Parent=Thaps263096;constitutive=1;rank=2 chr7 . CDS 451276 451446 . - 0 ID=Thaps263096;Parent=Thaps263096;rank=1 chr7 . exon 451276 451446 . - . ID=Thaps263096.1;Parent=Thaps263096;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 452287 454774 . - . ID=Thaps263097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMF4];external_name=Thaps263097;logic_name=jgi_thaps3 chr7 ensembl transcript 452287 454774 . - . ID=Thaps263097;Parent=Thaps263097;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 452287 453146 . - 0 ID=Thaps263097;Parent=Thaps263097;rank=5 chr7 . exon 452287 453146 . - . ID=Thaps263097.5;Parent=Thaps263097;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 453242 453398 . - 0 ID=Thaps263097;Parent=Thaps263097;rank=4 chr7 . exon 453242 453398 . - . ID=Thaps263097.4;Parent=Thaps263097;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 453600 453812 . - 0 ID=Thaps263097;Parent=Thaps263097;rank=3 chr7 . exon 453600 453812 . - . ID=Thaps263097.3;Parent=Thaps263097;constitutive=1;rank=3 chr7 . CDS 453923 454033 . - 0 ID=Thaps263097;Parent=Thaps263097;rank=2 chr7 . exon 453923 454033 . - . ID=Thaps263097.2;Parent=Thaps263097;constitutive=1;rank=2 chr7 . CDS 454372 454774 . - 0 ID=Thaps263097;Parent=Thaps263097;rank=1 chr7 . exon 454372 454774 . - . ID=Thaps263097.1;Parent=Thaps263097;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 456734 463808 . - . ID=Thaps6770;biotype=protein_coding;description=Acetyl-coa carboxylase [Source:UniProtKB/TrEMBL%3BAcc:B5YMF5];external_name=ACC;logic_name=jgi_thaps3 chr7 ensembl transcript 456734 463808 . - . ID=Thaps6770;Parent=Thaps6770;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 456734 460817 . - 0 ID=Thaps6770;Parent=Thaps6770;rank=3 chr7 . exon 456734 460817 . - . ID=Thaps6770.3;Parent=Thaps6770;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 460897 463012 . - 0 ID=Thaps6770;Parent=Thaps6770;rank=2 chr7 . CDS 463742 463808 . - 0 ID=Thaps6770;Parent=Thaps6770;rank=1 chr7 ensembl protein_coding_gene 466619 467729 . + . ID=Thaps35643;biotype=protein_coding;description=Protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B5YMF7];external_name=Thaps35643;logic_name=jgi_thaps3 chr7 ensembl transcript 466619 467729 . + . ID=Thaps35643;Parent=Thaps35643;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 466619 466750 . + 0 ID=Thaps35643;Parent=Thaps35643;rank=1 chr7 . exon 466619 466750 . + . ID=Thaps35643.1;Parent=Thaps35643;constitutive=1;rank=1 chr7 . CDS 466840 466990 . + 0 ID=Thaps35643;Parent=Thaps35643;rank=2 chr7 . exon 466840 466990 . + . ID=Thaps35643.2;Parent=Thaps35643;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 467064 467170 . + 0 ID=Thaps35643;Parent=Thaps35643;rank=3 chr7 . exon 467064 467170 . + . ID=Thaps35643.3;Parent=Thaps35643;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 467253 467729 . + 0 ID=Thaps35643;Parent=Thaps35643;rank=4 chr7 . exon 467253 467729 . + . ID=Thaps35643.4;Parent=Thaps35643;constitutive=1;rank=4 chr7 . exon 460897 463012 . - . ID=Thaps6770.2;Parent=Thaps6770;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 463742 463808 . - . ID=Thaps6770.1;Parent=Thaps6770;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 464603 466012 . + . ID=Thaps6771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMF6];external_name=Thaps6771;logic_name=jgi_thaps3 chr7 ensembl transcript 464603 466012 . + . ID=Thaps6771;Parent=Thaps6771;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 464603 466012 . + 0 ID=Thaps6771;Parent=Thaps6771;rank=1 chr7 . exon 464603 466012 . + . ID=Thaps6771.1;Parent=Thaps6771;constitutive=1;rank=1 chr7 . repeat_region 474403 474462 . ? . description=dust chr7 ensembl protein_coding_gene 475728 476384 . - . ID=Thaps18303;biotype=protein_coding;description=Canine-like rab-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG2];external_name=Thaps18303;logic_name=jgi_thaps3 chr7 ensembl transcript 475728 476384 . - . ID=Thaps18303;Parent=Thaps18303;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 475728 476242 . - 0 ID=Thaps18303;Parent=Thaps18303;rank=2 chr7 . exon 475728 476242 . - . ID=Thaps18303.2;Parent=Thaps18303;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 476351 476384 . - 0 ID=Thaps18303;Parent=Thaps18303;rank=1 chr7 . exon 476351 476384 . - . ID=Thaps18303.1;Parent=Thaps18303;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 470895 473926 . - . ID=Thaps23385;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG0];external_name=Thaps23385;logic_name=jgi_thaps3 chr7 ensembl transcript 470895 473926 . - . ID=Thaps23385;Parent=Thaps23385;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 470895 471898 . - 0 ID=Thaps23385;Parent=Thaps23385;rank=4 chr7 . exon 470895 471898 . - . ID=Thaps23385.4;Parent=Thaps23385;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 471935 472227 . - 0 ID=Thaps23385;Parent=Thaps23385;rank=3 chr7 . exon 471935 472227 . - . ID=Thaps23385.3;Parent=Thaps23385;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 472316 473339 . - 0 ID=Thaps23385;Parent=Thaps23385;rank=2 chr7 . exon 472316 473339 . - . ID=Thaps23385.2;Parent=Thaps23385;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 473506 473926 . - 0 ID=Thaps23385;Parent=Thaps23385;rank=1 chr7 . exon 473506 473926 . - . ID=Thaps23385.1;Parent=Thaps23385;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 476747 479383 . - . ID=Thaps23386;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG3];external_name=Thaps23386;logic_name=jgi_thaps3 chr7 ensembl transcript 476747 479383 . - . ID=Thaps23386;Parent=Thaps23386;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 476747 477486 . - 0 ID=Thaps23386;Parent=Thaps23386;rank=2 chr7 . exon 476747 477486 . - . ID=Thaps23386.2;Parent=Thaps23386;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 477583 479383 . - 0 ID=Thaps23386;Parent=Thaps23386;rank=1 chr7 . exon 477583 479383 . - . ID=Thaps23386.1;Parent=Thaps23386;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 474568 475086 . + . ID=Thaps35682;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG1];external_name=Thaps35682;logic_name=jgi_thaps3 chr7 ensembl transcript 474568 475086 . + . ID=Thaps35682;Parent=Thaps35682;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 474568 475086 . + 0 ID=Thaps35682;Parent=Thaps35682;rank=1 chr7 . exon 474568 475086 . + . ID=Thaps35682.1;Parent=Thaps35682;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 469195 469569 . - . ID=Thaps6773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMF8];external_name=Thaps6773;logic_name=jgi_thaps3 chr7 ensembl transcript 469195 469569 . - . ID=Thaps6773;Parent=Thaps6773;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 469195 469569 . - 0 ID=Thaps6773;Parent=Thaps6773;rank=1 chr7 . exon 469195 469569 . - . ID=Thaps6773.1;Parent=Thaps6773;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 469917 470408 . + . ID=Thaps6774;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMF9];external_name=Thaps6774;logic_name=jgi_thaps3 chr7 ensembl transcript 469917 470408 . + . ID=Thaps6774;Parent=Thaps6774;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 469917 470408 . + 0 ID=Thaps6774;Parent=Thaps6774;rank=1 chr7 . exon 469917 470408 . + . ID=Thaps6774.1;Parent=Thaps6774;constitutive=1;rank=1 chr7 . repeat_region 479716 479919 . ? . description=trf chr7 . repeat_region 481370 481411 . ? . description=trf chr7 . repeat_region 483970 483995 . ? . description=trf chr7 . biological_region 487657 487658 0.999 - . logic_name=eponine chr7 ensembl protein_coding_gene 486509 486928 . - . ID=Thaps19479;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG7];external_name=Thaps19479;logic_name=jgi_thaps3 chr7 ensembl transcript 486509 486928 . - . ID=Thaps19479;Parent=Thaps19479;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 486509 486928 . - 0 ID=Thaps19479;Parent=Thaps19479;rank=1 chr7 . exon 486509 486928 . - . ID=Thaps19479.1;Parent=Thaps19479;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 487527 490666 . + . ID=Thaps23387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG8];external_name=Thaps23387;logic_name=jgi_thaps3 chr7 ensembl transcript 487527 490666 . + . ID=Thaps23387;Parent=Thaps23387;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 487527 490581 . + 0 ID=Thaps23387;Parent=Thaps23387;rank=1 chr7 . exon 487527 490581 . + . ID=Thaps23387.1;Parent=Thaps23387;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 490632 490666 . + 0 ID=Thaps23387;Parent=Thaps23387;rank=2 chr7 ensembl protein_coding_gene 480103 481770 . + . ID=Thaps6779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG4];external_name=Thaps6779;logic_name=jgi_thaps3 chr7 ensembl transcript 480103 481770 . + . ID=Thaps6779;Parent=Thaps6779;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 480103 481770 . + 0 ID=Thaps6779;Parent=Thaps6779;rank=1 chr7 . exon 480103 481770 . + . ID=Thaps6779.1;Parent=Thaps6779;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 481988 483367 . - . ID=Thaps6780;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG5];external_name=Thaps6780;logic_name=jgi_thaps3 chr7 ensembl transcript 481988 483367 . - . ID=Thaps6780;Parent=Thaps6780;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 481988 482029 . - 0 ID=Thaps6780;Parent=Thaps6780;rank=6 chr7 . exon 481988 482029 . - . ID=Thaps6780.6;Parent=Thaps6780;constitutive=1;rank=6 chr7 . CDS 482091 482439 . - 0 ID=Thaps6780;Parent=Thaps6780;rank=5 chr7 . exon 482091 482439 . - . ID=Thaps6780.5;Parent=Thaps6780;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 482544 482757 . - 0 ID=Thaps6780;Parent=Thaps6780;rank=4 chr7 . exon 482544 482757 . - . ID=Thaps6780.4;Parent=Thaps6780;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 482794 483086 . - 0 ID=Thaps6780;Parent=Thaps6780;rank=3 chr7 . exon 482794 483086 . - . ID=Thaps6780.3;Parent=Thaps6780;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 483175 483308 . - 0 ID=Thaps6780;Parent=Thaps6780;rank=2 chr7 . exon 483175 483308 . - . ID=Thaps6780.2;Parent=Thaps6780;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 483344 483367 . - 0 ID=Thaps6780;Parent=Thaps6780;rank=1 chr7 . exon 483344 483367 . - . ID=Thaps6780.1;Parent=Thaps6780;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 483559 486209 . + . ID=Thaps6781;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG6];external_name=Thaps6781;logic_name=jgi_thaps3 chr7 ensembl transcript 483559 486209 . + . ID=Thaps6781;Parent=Thaps6781;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 483559 483961 . + 0 ID=Thaps6781;Parent=Thaps6781;rank=1 chr7 . exon 483559 483961 . + . ID=Thaps6781.1;Parent=Thaps6781;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 484075 485469 . + 0 ID=Thaps6781;Parent=Thaps6781;rank=2 chr7 . exon 484075 485469 . + . ID=Thaps6781.2;Parent=Thaps6781;constitutive=1;rank=2 chr7 . CDS 485556 485651 . + 0 ID=Thaps6781;Parent=Thaps6781;rank=3 chr7 . exon 485556 485651 . + . ID=Thaps6781.3;Parent=Thaps6781;constitutive=1;rank=3 chr7 . CDS 485737 486209 . + 0 ID=Thaps6781;Parent=Thaps6781;rank=4 chr7 . exon 485737 486209 . + . ID=Thaps6781.4;Parent=Thaps6781;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . exon 490632 490666 . + . ID=Thaps23387.2;Parent=Thaps23387;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 491809 492783 . + . ID=Thaps23388;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMH0];external_name=Thaps23388;logic_name=jgi_thaps3 chr7 ensembl transcript 491809 492783 . + . ID=Thaps23388;Parent=Thaps23388;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 491809 492783 . + 0 ID=Thaps23388;Parent=Thaps23388;rank=1 chr7 . exon 491809 492783 . + . ID=Thaps23388.1;Parent=Thaps23388;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 497317 498363 . - . ID=Thaps23390;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMH3];external_name=Thaps23390;logic_name=jgi_thaps3 chr7 ensembl transcript 497317 498363 . - . ID=Thaps23390;Parent=Thaps23390;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 497317 498363 . - 0 ID=Thaps23390;Parent=Thaps23390;rank=1 chr7 . exon 497317 498363 . - . ID=Thaps23390.1;Parent=Thaps23390;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 493243 495141 . + . ID=Thaps35523;biotype=protein_coding;description=Isocitrate lyase [Source:UniProtKB/TrEMBL%3BAcc:B5YMH1];external_name=Thaps35523;logic_name=jgi_thaps3 chr7 ensembl transcript 493243 495141 . + . ID=Thaps35523;Parent=Thaps35523;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 493243 493315 . + 0 ID=Thaps35523;Parent=Thaps35523;rank=1 chr7 . exon 493243 493315 . + . ID=Thaps35523.1;Parent=Thaps35523;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 493410 493666 . + 0 ID=Thaps35523;Parent=Thaps35523;rank=2 chr7 . exon 493410 493666 . + . ID=Thaps35523.2;Parent=Thaps35523;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 493757 493799 . + 0 ID=Thaps35523;Parent=Thaps35523;rank=3 chr7 . exon 493757 493799 . + . ID=Thaps35523.3;Parent=Thaps35523;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 493889 495141 . + 0 ID=Thaps35523;Parent=Thaps35523;rank=4 chr7 . exon 493889 495141 . + . ID=Thaps35523.4;Parent=Thaps35523;constitutive=1;ensembl_end_phase=2;rank=4 chr7 ensembl protein_coding_gene 490805 491533 . - . ID=Thaps6784;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMG9];external_name=Thaps6784;logic_name=jgi_thaps3 chr7 ensembl transcript 490805 491533 . - . ID=Thaps6784;Parent=Thaps6784;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 490805 491533 . - 0 ID=Thaps6784;Parent=Thaps6784;rank=1 chr7 . exon 490805 491533 . - . ID=Thaps6784.1;Parent=Thaps6784;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 495243 496328 . - . ID=Thaps6787;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMH2];external_name=Thaps6787;logic_name=jgi_thaps3 chr7 ensembl transcript 495243 496328 . - . ID=Thaps6787;Parent=Thaps6787;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 495243 496328 . - 0 ID=Thaps6787;Parent=Thaps6787;rank=1 chr7 . exon 495243 496328 . - . ID=Thaps6787.1;Parent=Thaps6787;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 501600 503033 . - . ID=Thaps23391;biotype=protein_coding;description=Microsomal delta-5 desaturase [Source:UniProtKB/TrEMBL%3BAcc:B5YMH5];external_name=DES11;logic_name=jgi_thaps3 chr7 ensembl transcript 501600 503033 . - . ID=Thaps23391;Parent=Thaps23391;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 501600 503033 . - 0 ID=Thaps23391;Parent=Thaps23391;rank=1 chr7 . exon 501600 503033 . - . ID=Thaps23391.1;Parent=Thaps23391;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 506420 507766 . + . ID=Thaps23393;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMH6];external_name=Thaps23393;logic_name=jgi_thaps3 chr7 ensembl transcript 506420 507766 . + . ID=Thaps23393;Parent=Thaps23393;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 506420 506485 . + 0 ID=Thaps23393;Parent=Thaps23393;rank=1 chr7 . exon 506420 506485 . + . ID=Thaps23393.1;Parent=Thaps23393;constitutive=1;rank=1 chr7 . CDS 506777 507037 . + 0 ID=Thaps23393;Parent=Thaps23393;rank=2 chr7 . exon 506777 507037 . + . ID=Thaps23393.2;Parent=Thaps23393;constitutive=1;rank=2 chr7 . CDS 507182 507766 . + 0 ID=Thaps23393;Parent=Thaps23393;rank=3 chr7 . exon 507182 507766 . + . ID=Thaps23393.3;Parent=Thaps23393;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 499220 499948 . - . ID=Thaps6789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMH4];external_name=Thaps6789;logic_name=jgi_thaps3 chr7 ensembl transcript 499220 499948 . - . ID=Thaps6789;Parent=Thaps6789;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 499220 499948 . - 0 ID=Thaps6789;Parent=Thaps6789;rank=1 chr7 . exon 499220 499948 . - . ID=Thaps6789.1;Parent=Thaps6789;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 508086 508805 . + . ID=Thaps6793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMH7];external_name=Thaps6793;logic_name=jgi_thaps3 chr7 ensembl transcript 508086 508805 . + . ID=Thaps6793;Parent=Thaps6793;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 508086 508805 . + 0 ID=Thaps6793;Parent=Thaps6793;rank=1 chr7 . exon 508086 508805 . + . ID=Thaps6793.1;Parent=Thaps6793;constitutive=1;rank=1 chr7 . repeat_region 511921 511952 . ? . description=trf chr7 . repeat_region 512148 512179 . ? . description=trf chr7 . repeat_region 513075 513082 . ? . description=dust chr7 ensembl protein_coding_gene 515011 518749 . - . ID=Thaps23394;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMH9];external_name=Thaps23394;logic_name=jgi_thaps3 chr7 ensembl transcript 515011 518749 . - . ID=Thaps23394;Parent=Thaps23394;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 515011 516376 . - 0 ID=Thaps23394;Parent=Thaps23394;rank=3 chr7 . exon 515011 516376 . - . ID=Thaps23394.3;Parent=Thaps23394;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 516456 517280 . - 0 ID=Thaps23394;Parent=Thaps23394;rank=2 chr7 . exon 516456 517280 . - . ID=Thaps23394.2;Parent=Thaps23394;constitutive=1;rank=2 chr7 . CDS 517326 518749 . - 0 ID=Thaps23394;Parent=Thaps23394;rank=1 chr7 . exon 517326 518749 . - . ID=Thaps23394.1;Parent=Thaps23394;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 512443 514965 . + . ID=Thaps263105;biotype=protein_coding;description=Probable long-chain-fatty-acid--CoA ligase [Source:UniProtKB/TrEMBL%3BAcc:B5YMH8];external_name=FCL1;logic_name=jgi_thaps3 chr7 ensembl transcript 512443 514965 . + . ID=Thaps263105;Parent=Thaps263105;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 512443 512869 . + 0 ID=Thaps263105;Parent=Thaps263105;rank=1 chr7 . exon 512443 512869 . + . ID=Thaps263105.1;Parent=Thaps263105;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 513015 513143 . + 0 ID=Thaps263105;Parent=Thaps263105;rank=2 chr7 . exon 513015 513143 . + . ID=Thaps263105.2;Parent=Thaps263105;constitutive=1;rank=2 chr7 . CDS 513220 513331 . + 0 ID=Thaps263105;Parent=Thaps263105;rank=3 chr7 . exon 513220 513331 . + . ID=Thaps263105.3;Parent=Thaps263105;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 513413 513770 . + 0 ID=Thaps263105;Parent=Thaps263105;rank=4 chr7 . exon 513413 513770 . + . ID=Thaps263105.4;Parent=Thaps263105;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 513845 514041 . + 0 ID=Thaps263105;Parent=Thaps263105;rank=5 chr7 . exon 513845 514041 . + . ID=Thaps263105.5;Parent=Thaps263105;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 514137 514806 . + 0 ID=Thaps263105;Parent=Thaps263105;rank=6 chr7 . exon 514137 514806 . + . ID=Thaps263105.6;Parent=Thaps263105;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . CDS 514882 514965 . + 0 ID=Thaps263105;Parent=Thaps263105;rank=7 chr7 . exon 514882 514965 . + . ID=Thaps263105.7;Parent=Thaps263105;constitutive=1;rank=7 chr7 ensembl protein_coding_gene 523618 525928 . + . ID=Thaps23396;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMI3];external_name=Thaps23396;logic_name=jgi_thaps3 chr7 ensembl transcript 523618 525928 . + . ID=Thaps23396;Parent=Thaps23396;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 523618 523824 . + 0 ID=Thaps23396;Parent=Thaps23396;rank=1 chr7 . exon 523618 523824 . + . ID=Thaps23396.1;Parent=Thaps23396;constitutive=1;rank=1 chr7 . CDS 523901 523956 . + 0 ID=Thaps23396;Parent=Thaps23396;rank=2 chr7 . exon 523901 523956 . + . ID=Thaps23396.2;Parent=Thaps23396;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 524002 525083 . + 0 ID=Thaps23396;Parent=Thaps23396;rank=3 chr7 . exon 524002 525083 . + . ID=Thaps23396.3;Parent=Thaps23396;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 525168 525928 . + 0 ID=Thaps23396;Parent=Thaps23396;rank=4 chr7 . exon 525168 525928 . + . ID=Thaps23396.4;Parent=Thaps23396;constitutive=1;ensembl_end_phase=2;rank=4 chr7 ensembl protein_coding_gene 527905 528327 . + . ID=Thaps35624;biotype=protein_coding;description=Glyoxylase domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMI5];external_name=Thaps35624;logic_name=jgi_thaps3 chr7 ensembl transcript 527905 528327 . + . ID=Thaps35624;Parent=Thaps35624;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 527905 528327 . + 0 ID=Thaps35624;Parent=Thaps35624;rank=1 chr7 . exon 527905 528327 . + . ID=Thaps35624.1;Parent=Thaps35624;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 518955 520328 . + . ID=Thaps6796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMI0];external_name=Thaps6796;logic_name=jgi_thaps3 chr7 ensembl transcript 518955 520328 . + . ID=Thaps6796;Parent=Thaps6796;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 518955 520328 . + 0 ID=Thaps6796;Parent=Thaps6796;rank=1 chr7 . exon 518955 520328 . + . ID=Thaps6796.1;Parent=Thaps6796;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 520794 521657 . + . ID=Thaps6797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMI1];external_name=Thaps6797;logic_name=jgi_thaps3 chr7 ensembl transcript 520794 521657 . + . ID=Thaps6797;Parent=Thaps6797;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 520794 521657 . + 0 ID=Thaps6797;Parent=Thaps6797;rank=1 chr7 . exon 520794 521657 . + . ID=Thaps6797.1;Parent=Thaps6797;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 521845 523027 . - . ID=Thaps6798;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMI2];external_name=Thaps6798;logic_name=jgi_thaps3 chr7 ensembl transcript 521845 523027 . - . ID=Thaps6798;Parent=Thaps6798;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 521845 521961 . - 0 ID=Thaps6798;Parent=Thaps6798;rank=4 chr7 . exon 521845 521961 . - . ID=Thaps6798.4;Parent=Thaps6798;constitutive=1;rank=4 chr7 . CDS 522046 522194 . - 0 ID=Thaps6798;Parent=Thaps6798;rank=3 chr7 . exon 522046 522194 . - . ID=Thaps6798.3;Parent=Thaps6798;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 522280 522556 . - 0 ID=Thaps6798;Parent=Thaps6798;rank=2 chr7 . exon 522280 522556 . - . ID=Thaps6798.2;Parent=Thaps6798;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 522650 523027 . - 0 ID=Thaps6798;Parent=Thaps6798;rank=1 chr7 . exon 522650 523027 . - . ID=Thaps6798.1;Parent=Thaps6798;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 526044 527069 . - . ID=Thaps6800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMI4];external_name=Thaps6800;logic_name=jgi_thaps3 chr7 ensembl transcript 526044 527069 . - . ID=Thaps6800;Parent=Thaps6800;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 526044 527069 . - 0 ID=Thaps6800;Parent=Thaps6800;rank=1 chr7 . exon 526044 527069 . - . ID=Thaps6800.1;Parent=Thaps6800;constitutive=1;rank=1 chr7 . repeat_region 530779 530918 . ? . description=trf chr7 . repeat_region 530912 530926 . ? . description=dust chr7 . repeat_region 532105 532151 . ? . description=trf chr7 . repeat_region 532882 532939 . ? . description=dust chr7 ensembl protein_coding_gene 532560 533087 . + . ID=Thaps263108;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMI8];external_name=Thaps263108;logic_name=jgi_thaps3 chr7 ensembl transcript 532560 533087 . + . ID=Thaps263108;Parent=Thaps263108;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 532560 532626 . + 0 ID=Thaps263108;Parent=Thaps263108;rank=1 chr7 . exon 532560 532626 . + . ID=Thaps263108.1;Parent=Thaps263108;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 532720 532956 . + 0 ID=Thaps263108;Parent=Thaps263108;rank=2 chr7 . exon 532720 532956 . + . ID=Thaps263108.2;Parent=Thaps263108;constitutive=1;rank=2 chr7 . CDS 532990 533087 . + 0 ID=Thaps263108;Parent=Thaps263108;rank=3 chr7 . exon 532990 533087 . + . ID=Thaps263108.3;Parent=Thaps263108;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 528464 529356 . - . ID=Thaps6802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMI6];external_name=Thaps6802;logic_name=jgi_thaps3 chr7 ensembl transcript 528464 529356 . - . ID=Thaps6802;Parent=Thaps6802;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 528464 528495 . - 0 ID=Thaps6802;Parent=Thaps6802;rank=3 chr7 . exon 528464 528495 . - . ID=Thaps6802.3;Parent=Thaps6802;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 528582 529203 . - 0 ID=Thaps6802;Parent=Thaps6802;rank=2 chr7 . exon 528582 529203 . - . ID=Thaps6802.2;Parent=Thaps6802;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 529225 529356 . - 0 ID=Thaps6802;Parent=Thaps6802;rank=1 chr7 . exon 529225 529356 . - . ID=Thaps6802.1;Parent=Thaps6802;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 529938 530639 . + . ID=Thaps6803;biotype=protein_coding;description=Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL%3BAcc:B5YMI7];external_name=RPE1;logic_name=jgi_thaps3 chr7 ensembl transcript 529938 530639 . + . ID=Thaps6803;Parent=Thaps6803;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 529938 530639 . + 0 ID=Thaps6803;Parent=Thaps6803;rank=1 chr7 . exon 529938 530639 . + . ID=Thaps6803.1;Parent=Thaps6803;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 536023 538194 . - . ID=Thaps6805;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMI9];external_name=Thaps6805;logic_name=jgi_thaps3 chr7 ensembl transcript 536023 538194 . - . ID=Thaps6805;Parent=Thaps6805;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 536023 538194 . - 0 ID=Thaps6805;Parent=Thaps6805;rank=1 chr7 . exon 536023 538194 . - . ID=Thaps6805.1;Parent=Thaps6805;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 545667 546527 . + . ID=Thaps23399;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ5];external_name=Thaps23399;logic_name=jgi_thaps3 chr7 ensembl transcript 545667 546527 . + . ID=Thaps23399;Parent=Thaps23399;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 545667 545745 . + 0 ID=Thaps23399;Parent=Thaps23399;rank=1 chr7 . exon 545667 545745 . + . ID=Thaps23399.1;Parent=Thaps23399;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 546112 546479 . + 0 ID=Thaps23399;Parent=Thaps23399;rank=2 chr7 . exon 546112 546479 . + . ID=Thaps23399.2;Parent=Thaps23399;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 546513 546527 . + 0 ID=Thaps23399;Parent=Thaps23399;rank=3 chr7 . exon 546513 546527 . + . ID=Thaps23399.3;Parent=Thaps23399;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 538691 539648 . + . ID=Thaps35711;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ0];external_name=Thaps35711;logic_name=jgi_thaps3 chr7 ensembl transcript 538691 539648 . + . ID=Thaps35711;Parent=Thaps35711;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 538691 538939 . + 0 ID=Thaps35711;Parent=Thaps35711;rank=1 chr7 . exon 538691 538939 . + . ID=Thaps35711.1;Parent=Thaps35711;constitutive=1;rank=1 chr7 . CDS 539009 539173 . + 0 ID=Thaps35711;Parent=Thaps35711;rank=2 chr7 . exon 539009 539173 . + . ID=Thaps35711.2;Parent=Thaps35711;constitutive=1;rank=2 chr7 . CDS 539255 539492 . + 0 ID=Thaps35711;Parent=Thaps35711;rank=3 chr7 . exon 539255 539492 . + . ID=Thaps35711.3;Parent=Thaps35711;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 539572 539648 . + 0 ID=Thaps35711;Parent=Thaps35711;rank=4 chr7 . exon 539572 539648 . + . ID=Thaps35711.4;Parent=Thaps35711;constitutive=1;ensembl_end_phase=2;rank=4 chr7 ensembl protein_coding_gene 547381 548509 . + . ID=Thaps41291;biotype=protein_coding;description=Calmodulin [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ6];external_name=CAM1;logic_name=jgi_thaps3 chr7 ensembl transcript 547381 548509 . + . ID=Thaps41291;Parent=Thaps41291;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 547381 547456 . + 0 ID=Thaps41291;Parent=Thaps41291;rank=1 chr7 . exon 547381 547456 . + . ID=Thaps41291.1;Parent=Thaps41291;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 548027 548115 . + 0 ID=Thaps41291;Parent=Thaps41291;rank=2 chr7 . CDS 548225 548509 . + 0 ID=Thaps41291;Parent=Thaps41291;rank=3 chr7 ensembl protein_coding_gene 540433 541026 . + . ID=Thaps6807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ1];external_name=Thaps6807;logic_name=jgi_thaps3 chr7 ensembl transcript 540433 541026 . + . ID=Thaps6807;Parent=Thaps6807;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 540433 541026 . + 0 ID=Thaps6807;Parent=Thaps6807;rank=1 chr7 . exon 540433 541026 . + . ID=Thaps6807.1;Parent=Thaps6807;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 541471 542460 . - . ID=Thaps6808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ2];external_name=Thaps6808;logic_name=jgi_thaps3 chr7 ensembl transcript 541471 542460 . - . ID=Thaps6808;Parent=Thaps6808;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 541471 542460 . - 0 ID=Thaps6808;Parent=Thaps6808;rank=1 chr7 . exon 541471 542460 . - . ID=Thaps6808.1;Parent=Thaps6808;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 543772 544302 . - . ID=Thaps6809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ3];external_name=Thaps6809;logic_name=jgi_thaps3 chr7 ensembl transcript 543772 544302 . - . ID=Thaps6809;Parent=Thaps6809;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 543772 544302 . - 0 ID=Thaps6809;Parent=Thaps6809;rank=1 chr7 . exon 543772 544302 . - . ID=Thaps6809.1;Parent=Thaps6809;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 544930 545418 . - . ID=Thaps6810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ4];external_name=Thaps6810;logic_name=jgi_thaps3 chr7 ensembl transcript 544930 545418 . - . ID=Thaps6810;Parent=Thaps6810;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 544930 545418 . - 0 ID=Thaps6810;Parent=Thaps6810;rank=1 chr7 . exon 544930 545418 . - . ID=Thaps6810.1;Parent=Thaps6810;constitutive=1;rank=1 chr7 . repeat_region 551204 551250 . ? . description=dust chr7 . repeat_region 555200 555218 . ? . description=dust chr7 ensembl protein_coding_gene 551173 551904 . + . ID=Thaps23402;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ8];external_name=Thaps23402;logic_name=jgi_thaps3 chr7 ensembl transcript 551173 551904 . + . ID=Thaps23402;Parent=Thaps23402;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 551173 551904 . + 0 ID=Thaps23402;Parent=Thaps23402;rank=1 chr7 . exon 551173 551904 . + . ID=Thaps23402.1;Parent=Thaps23402;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 552269 552766 . + . ID=Thaps23403;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ9];external_name=Thaps23403;logic_name=jgi_thaps3 chr7 ensembl transcript 552269 552766 . + . ID=Thaps23403;Parent=Thaps23403;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 552269 552766 . + 0 ID=Thaps23403;Parent=Thaps23403;rank=1 chr7 . exon 552269 552766 . + . ID=Thaps23403.1;Parent=Thaps23403;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 548905 550782 . - . ID=Thaps263111;biotype=protein_coding;description=Phosphomannomutase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMJ7];external_name=Thaps263111;logic_name=jgi_thaps3 chr7 ensembl transcript 548905 550782 . - . ID=Thaps263111;Parent=Thaps263111;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 548905 549042 . - 0 ID=Thaps263111;Parent=Thaps263111;rank=4 chr7 . exon 548905 549042 . - . ID=Thaps263111.4;Parent=Thaps263111;constitutive=1;rank=4 chr7 . CDS 549136 550084 . - 0 ID=Thaps263111;Parent=Thaps263111;rank=3 chr7 . exon 549136 550084 . - . ID=Thaps263111.3;Parent=Thaps263111;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 550163 550649 . - 0 ID=Thaps263111;Parent=Thaps263111;rank=2 chr7 . exon 550163 550649 . - . ID=Thaps263111.2;Parent=Thaps263111;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 550741 550782 . - 0 ID=Thaps263111;Parent=Thaps263111;rank=1 chr7 . exon 550741 550782 . - . ID=Thaps263111.1;Parent=Thaps263111;constitutive=1;rank=1 chr7 . exon 548027 548115 . + . ID=Thaps41291.2;Parent=Thaps41291;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 548225 548509 . + . ID=Thaps41291.3;Parent=Thaps41291;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 552886 554146 . - . ID=Thaps6816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMK0];external_name=Thaps6816;logic_name=jgi_thaps3 chr7 ensembl transcript 552886 554146 . - . ID=Thaps6816;Parent=Thaps6816;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 552886 553178 . - 0 ID=Thaps6816;Parent=Thaps6816;rank=3 chr7 . exon 552886 553178 . - . ID=Thaps6816.3;Parent=Thaps6816;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 553277 553656 . - 0 ID=Thaps6816;Parent=Thaps6816;rank=2 chr7 . exon 553277 553656 . - . ID=Thaps6816.2;Parent=Thaps6816;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 553812 554146 . - 0 ID=Thaps6816;Parent=Thaps6816;rank=1 chr7 . exon 553812 554146 . - . ID=Thaps6816.1;Parent=Thaps6816;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 554497 556594 . + . ID=Thaps6817;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMK1];external_name=Thaps6817;logic_name=jgi_thaps3 chr7 ensembl transcript 554497 556594 . + . ID=Thaps6817;Parent=Thaps6817;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 554497 555070 . + 0 ID=Thaps6817;Parent=Thaps6817;rank=1 chr7 . exon 554497 555070 . + . ID=Thaps6817.1;Parent=Thaps6817;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 555225 555492 . + 0 ID=Thaps6817;Parent=Thaps6817;rank=2 chr7 . exon 555225 555492 . + . ID=Thaps6817.2;Parent=Thaps6817;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 555755 555956 . + 0 ID=Thaps6817;Parent=Thaps6817;rank=3 chr7 . exon 555755 555956 . + . ID=Thaps6817.3;Parent=Thaps6817;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 556012 556524 . + 0 ID=Thaps6817;Parent=Thaps6817;rank=4 chr7 . exon 556012 556524 . + . ID=Thaps6817.4;Parent=Thaps6817;constitutive=1;rank=4 chr7 . CDS 556571 556594 . + 0 ID=Thaps6817;Parent=Thaps6817;rank=5 chr7 . exon 556571 556594 . + . ID=Thaps6817.5;Parent=Thaps6817;constitutive=1;rank=5 chr7 ensembl protein_coding_gene 557097 559708 . - . ID=Thaps6818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMK2];external_name=Thaps6818;logic_name=jgi_thaps3 chr7 ensembl transcript 557097 559708 . - . ID=Thaps6818;Parent=Thaps6818;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 557097 557498 . - 0 ID=Thaps6818;Parent=Thaps6818;rank=4 chr7 . exon 557097 557498 . - . ID=Thaps6818.4;Parent=Thaps6818;constitutive=1;rank=4 chr7 . CDS 557580 558896 . - 0 ID=Thaps6818;Parent=Thaps6818;rank=3 chr7 . exon 557580 558896 . - . ID=Thaps6818.3;Parent=Thaps6818;constitutive=1;rank=3 chr7 . CDS 559001 559315 . - 0 ID=Thaps6818;Parent=Thaps6818;rank=2 chr7 . CDS 559379 559708 . - 0 ID=Thaps6818;Parent=Thaps6818;rank=1 chr7 ensembl protein_coding_gene 563910 569799 . - . ID=Thaps23404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMK5];external_name=Thaps23404;logic_name=jgi_thaps3 chr7 ensembl transcript 563910 569799 . - . ID=Thaps23404;Parent=Thaps23404;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 563910 564022 . - 0 ID=Thaps23404;Parent=Thaps23404;rank=8 chr7 . exon 563910 564022 . - . ID=Thaps23404.8;Parent=Thaps23404;constitutive=1;ensembl_end_phase=2;rank=8 chr7 . CDS 564116 564364 . - 0 ID=Thaps23404;Parent=Thaps23404;rank=7 chr7 . exon 564116 564364 . - . ID=Thaps23404.7;Parent=Thaps23404;constitutive=1;rank=7 chr7 . CDS 564439 564591 . - 0 ID=Thaps23404;Parent=Thaps23404;rank=6 chr7 . exon 564439 564591 . - . ID=Thaps23404.6;Parent=Thaps23404;constitutive=1;rank=6 chr7 . CDS 564667 565605 . - 0 ID=Thaps23404;Parent=Thaps23404;rank=5 chr7 . exon 564667 565605 . - . ID=Thaps23404.5;Parent=Thaps23404;constitutive=1;rank=5 chr7 . CDS 565837 566169 . - 0 ID=Thaps23404;Parent=Thaps23404;rank=4 chr7 . exon 565837 566169 . - . ID=Thaps23404.4;Parent=Thaps23404;constitutive=1;rank=4 chr7 . CDS 566264 566618 . - 0 ID=Thaps23404;Parent=Thaps23404;rank=3 chr7 . exon 566264 566618 . - . ID=Thaps23404.3;Parent=Thaps23404;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 566702 567131 . - 0 ID=Thaps23404;Parent=Thaps23404;rank=2 chr7 . exon 566702 567131 . - . ID=Thaps23404.2;Parent=Thaps23404;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 567212 569799 . - 0 ID=Thaps23404;Parent=Thaps23404;rank=1 chr7 . exon 567212 569799 . - . ID=Thaps23404.1;Parent=Thaps23404;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . exon 559001 559315 . - . ID=Thaps6818.2;Parent=Thaps6818;constitutive=1;rank=2 chr7 . exon 559379 559708 . - . ID=Thaps6818.1;Parent=Thaps6818;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 560129 561154 . + . ID=Thaps6819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMK3];external_name=Thaps6819;logic_name=jgi_thaps3 chr7 ensembl transcript 560129 561154 . + . ID=Thaps6819;Parent=Thaps6819;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 560129 561154 . + 0 ID=Thaps6819;Parent=Thaps6819;rank=1 chr7 . exon 560129 561154 . + . ID=Thaps6819.1;Parent=Thaps6819;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 561375 563133 . - . ID=Thaps6820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMK4];external_name=Thaps6820;logic_name=jgi_thaps3 chr7 ensembl transcript 561375 563133 . - . ID=Thaps6820;Parent=Thaps6820;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 561375 562031 . - 0 ID=Thaps6820;Parent=Thaps6820;rank=3 chr7 . exon 561375 562031 . - . ID=Thaps6820.3;Parent=Thaps6820;constitutive=1;rank=3 chr7 . CDS 562115 562773 . - 0 ID=Thaps6820;Parent=Thaps6820;rank=2 chr7 . exon 562115 562773 . - . ID=Thaps6820.2;Parent=Thaps6820;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 562926 563133 . - 0 ID=Thaps6820;Parent=Thaps6820;rank=1 chr7 . exon 562926 563133 . - . ID=Thaps6820.1;Parent=Thaps6820;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl tRNA_gene 571410 571521 . - . ID=EPrTPOG00000000082;biotype=tRNA;description=tRNA-Val for anticodon AAC [Source:TRNASCAN_SE%3BAcc:tRNA-Val];external_name=tRNA-Val;logic_name=ncrna_eg chr7 ensembl transcript 571410 571521 . - . ID=EPrTPOT00000000082;Parent=EPrTPOG00000000082;biotype=tRNA;logic_name=ncrna_eg chr7 . exon 571410 571521 . - . ID=EPrTPOE00000000082;Parent=EPrTPOT00000000082;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 570219 571107 . + . ID=Thaps23405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMK6];external_name=Thaps23405;logic_name=jgi_thaps3 chr7 ensembl transcript 570219 571107 . + . ID=Thaps23405;Parent=Thaps23405;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 570219 570679 . + 0 ID=Thaps23405;Parent=Thaps23405;rank=1 chr7 . exon 570219 570679 . + . ID=Thaps23405.1;Parent=Thaps23405;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 570825 571107 . + 0 ID=Thaps23405;Parent=Thaps23405;rank=2 chr7 . exon 570825 571107 . + . ID=Thaps23405.2;Parent=Thaps23405;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 576832 579500 . - . ID=Thaps41300;biotype=protein_coding;description=Glucosidase II alpha subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YMK8];external_name=EXG1;logic_name=jgi_thaps3 chr7 ensembl transcript 576832 579500 . - . ID=Thaps41300;Parent=Thaps41300;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 576832 577537 . - 0 ID=Thaps41300;Parent=Thaps41300;rank=2 chr7 . exon 576832 577537 . - . ID=Thaps41300.2;Parent=Thaps41300;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 577627 579500 . - 0 ID=Thaps41300;Parent=Thaps41300;rank=1 chr7 . exon 577627 579500 . - . ID=Thaps41300.1;Parent=Thaps41300;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 571834 574073 . - . ID=Thaps6823;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMK7];external_name=Thaps6823;logic_name=jgi_thaps3 chr7 ensembl transcript 571834 574073 . - . ID=Thaps6823;Parent=Thaps6823;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 571834 572887 . - 0 ID=Thaps6823;Parent=Thaps6823;rank=3 chr7 . exon 571834 572887 . - . ID=Thaps6823.3;Parent=Thaps6823;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 572975 573868 . - 0 ID=Thaps6823;Parent=Thaps6823;rank=2 chr7 . exon 572975 573868 . - . ID=Thaps6823.2;Parent=Thaps6823;constitutive=1;rank=2 chr7 . CDS 574015 574073 . - 0 ID=Thaps6823;Parent=Thaps6823;rank=1 chr7 . exon 574015 574073 . - . ID=Thaps6823.1;Parent=Thaps6823;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . repeat_region 585941 585948 . ? . description=dust chr7 ensembl protein_coding_gene 586038 587427 . + . ID=Thaps573;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML1];external_name=Thaps573;logic_name=jgi_thaps3 chr7 ensembl transcript 586038 587427 . + . ID=Thaps573;Parent=Thaps573;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 586038 586145 . + 0 ID=Thaps573;Parent=Thaps573;rank=1 chr7 . exon 586038 586145 . + . ID=Thaps573.1;Parent=Thaps573;constitutive=1;rank=1 chr7 . CDS 586598 586694 . + 0 ID=Thaps573;Parent=Thaps573;rank=2 chr7 . exon 586598 586694 . + . ID=Thaps573.2;Parent=Thaps573;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 586811 586872 . + 0 ID=Thaps573;Parent=Thaps573;rank=3 chr7 . exon 586811 586872 . + . ID=Thaps573.3;Parent=Thaps573;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 587016 587097 . + 0 ID=Thaps573;Parent=Thaps573;rank=4 chr7 . exon 587016 587097 . + . ID=Thaps573.4;Parent=Thaps573;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 587200 587281 . + 0 ID=Thaps573;Parent=Thaps573;rank=5 chr7 . exon 587200 587281 . + . ID=Thaps573.5;Parent=Thaps573;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 587370 587427 . + 0 ID=Thaps573;Parent=Thaps573;rank=6 chr7 . exon 587370 587427 . + . ID=Thaps573.6;Parent=Thaps573;constitutive=1;ensembl_end_phase=1;rank=6 chr7 ensembl protein_coding_gene 580755 582357 . + . ID=Thaps6825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMK9];external_name=Thaps6825;logic_name=jgi_thaps3 chr7 ensembl transcript 580755 582357 . + . ID=Thaps6825;Parent=Thaps6825;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 580755 581095 . + 0 ID=Thaps6825;Parent=Thaps6825;rank=1 chr7 . exon 580755 581095 . + . ID=Thaps6825.1;Parent=Thaps6825;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 581205 581509 . + 0 ID=Thaps6825;Parent=Thaps6825;rank=2 chr7 . exon 581205 581509 . + . ID=Thaps6825.2;Parent=Thaps6825;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 581543 581684 . + 0 ID=Thaps6825;Parent=Thaps6825;rank=3 chr7 . exon 581543 581684 . + . ID=Thaps6825.3;Parent=Thaps6825;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 581787 582357 . + 0 ID=Thaps6825;Parent=Thaps6825;rank=4 chr7 . exon 581787 582357 . + . ID=Thaps6825.4;Parent=Thaps6825;constitutive=1;ensembl_end_phase=1;rank=4 chr7 ensembl protein_coding_gene 582409 585543 . - . ID=Thaps6826;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML0];external_name=Thaps6826;logic_name=jgi_thaps3 chr7 ensembl transcript 582409 585543 . - . ID=Thaps6826;Parent=Thaps6826;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 582409 585543 . - 0 ID=Thaps6826;Parent=Thaps6826;rank=1 chr7 . exon 582409 585543 . - . ID=Thaps6826.1;Parent=Thaps6826;constitutive=1;rank=1 chr7 . repeat_region 594059 594078 . ? . description=trf chr7 ensembl protein_coding_gene 588113 590060 . + . ID=Thaps23407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML2];external_name=Thaps23407;logic_name=jgi_thaps3 chr7 ensembl transcript 588113 590060 . + . ID=Thaps23407;Parent=Thaps23407;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 588113 589114 . + 0 ID=Thaps23407;Parent=Thaps23407;rank=1 chr7 . exon 588113 589114 . + . ID=Thaps23407.1;Parent=Thaps23407;constitutive=1;rank=1 chr7 . CDS 589196 589294 . + 0 ID=Thaps23407;Parent=Thaps23407;rank=2 chr7 . exon 589196 589294 . + . ID=Thaps23407.2;Parent=Thaps23407;constitutive=1;rank=2 chr7 . CDS 589379 589450 . + 0 ID=Thaps23407;Parent=Thaps23407;rank=3 chr7 . exon 589379 589450 . + . ID=Thaps23407.3;Parent=Thaps23407;constitutive=1;rank=3 chr7 . CDS 589542 590060 . + 0 ID=Thaps23407;Parent=Thaps23407;rank=4 chr7 . exon 589542 590060 . + . ID=Thaps23407.4;Parent=Thaps23407;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 591524 593251 . - . ID=Thaps23408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML3];external_name=Thaps23408;logic_name=jgi_thaps3 chr7 ensembl transcript 591524 593251 . - . ID=Thaps23408;Parent=Thaps23408;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 591524 593251 . - 0 ID=Thaps23408;Parent=Thaps23408;rank=1 chr7 . exon 591524 593251 . - . ID=Thaps23408.1;Parent=Thaps23408;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 593475 594205 . + . ID=Thaps23409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML4];external_name=Thaps23409;logic_name=jgi_thaps3 chr7 ensembl transcript 593475 594205 . + . ID=Thaps23409;Parent=Thaps23409;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 593475 593549 . + 0 ID=Thaps23409;Parent=Thaps23409;rank=1 chr7 . exon 593475 593549 . + . ID=Thaps23409.1;Parent=Thaps23409;constitutive=1;rank=1 chr7 . CDS 593822 594205 . + 0 ID=Thaps23409;Parent=Thaps23409;rank=2 chr7 . exon 593822 594205 . + . ID=Thaps23409.2;Parent=Thaps23409;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 594816 594995 . - . ID=Thaps263115;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML5];external_name=Thaps263115;logic_name=jgi_thaps3 chr7 ensembl transcript 594816 594995 . - . ID=Thaps263115;Parent=Thaps263115;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 594816 594995 . - 0 ID=Thaps263115;Parent=Thaps263115;rank=1 chr7 . exon 594816 594995 . - . ID=Thaps263115.1;Parent=Thaps263115;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 597125 599349 . + . ID=Thaps6832;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML6];external_name=Thaps6832;logic_name=jgi_thaps3 chr7 ensembl transcript 597125 599349 . + . ID=Thaps6832;Parent=Thaps6832;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 597125 599072 . + 0 ID=Thaps6832;Parent=Thaps6832;rank=1 chr7 . exon 597125 599072 . + . ID=Thaps6832.1;Parent=Thaps6832;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 599242 599309 . + 0 ID=Thaps6832;Parent=Thaps6832;rank=2 chr7 . CDS 599335 599349 . + 0 ID=Thaps6832;Parent=Thaps6832;rank=3 chr7 . repeat_region 607084 607096 . ? . description=dust chr7 . repeat_region 607346 607404 . ? . description=dust chr7 ensembl protein_coding_gene 599489 603399 . - . ID=Thaps23410;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML7];external_name=Thaps23410;logic_name=jgi_thaps3 chr7 ensembl transcript 599489 603399 . - . ID=Thaps23410;Parent=Thaps23410;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 599489 602278 . - 0 ID=Thaps23410;Parent=Thaps23410;rank=4 chr7 . exon 599489 602278 . - . ID=Thaps23410.4;Parent=Thaps23410;constitutive=1;rank=4 chr7 . CDS 602642 602721 . - 0 ID=Thaps23410;Parent=Thaps23410;rank=3 chr7 . exon 602642 602721 . - . ID=Thaps23410.3;Parent=Thaps23410;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 602886 603151 . - 0 ID=Thaps23410;Parent=Thaps23410;rank=2 chr7 . exon 602886 603151 . - . ID=Thaps23410.2;Parent=Thaps23410;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 603290 603399 . - 0 ID=Thaps23410;Parent=Thaps23410;rank=1 chr7 . exon 603290 603399 . - . ID=Thaps23410.1;Parent=Thaps23410;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 603892 606180 . + . ID=Thaps23411;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML8];external_name=Thaps23411;logic_name=jgi_thaps3 chr7 ensembl transcript 603892 606180 . + . ID=Thaps23411;Parent=Thaps23411;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 603892 606180 . + 0 ID=Thaps23411;Parent=Thaps23411;rank=1 chr7 . exon 603892 606180 . + . ID=Thaps23411.1;Parent=Thaps23411;constitutive=1;rank=1 chr7 . exon 599242 599309 . + . ID=Thaps6832.2;Parent=Thaps6832;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 599335 599349 . + . ID=Thaps6832.3;Parent=Thaps6832;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 606309 607620 . - . ID=Thaps6835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YML9];external_name=Thaps6835;logic_name=jgi_thaps3 chr7 ensembl transcript 606309 607620 . - . ID=Thaps6835;Parent=Thaps6835;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 606309 606719 . - 0 ID=Thaps6835;Parent=Thaps6835;rank=2 chr7 . exon 606309 606719 . - . ID=Thaps6835.2;Parent=Thaps6835;constitutive=1;rank=2 chr7 . CDS 606814 607620 . - 0 ID=Thaps6835;Parent=Thaps6835;rank=1 chr7 . exon 606814 607620 . - . ID=Thaps6835.1;Parent=Thaps6835;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 608243 608665 . + . ID=Thaps263116;biotype=protein_coding;description=Rubredoxin%2C rubredoxin-type Fe4 protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMM0];external_name=Thaps263116;logic_name=jgi_thaps3 chr7 ensembl transcript 608243 608665 . + . ID=Thaps263116;Parent=Thaps263116;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 608243 608665 . + 0 ID=Thaps263116;Parent=Thaps263116;rank=1 chr7 . exon 608243 608665 . + . ID=Thaps263116.1;Parent=Thaps263116;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 616263 616868 . + . ID=Thaps263118;biotype=protein_coding;description=ABC transporter family protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMM3];external_name=Thaps263118;logic_name=jgi_thaps3 chr7 ensembl transcript 616263 616868 . + . ID=Thaps263118;Parent=Thaps263118;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 616263 616508 . + 0 ID=Thaps263118;Parent=Thaps263118;rank=1 chr7 . exon 616263 616508 . + . ID=Thaps263118.1;Parent=Thaps263118;constitutive=1;rank=1 chr7 . CDS 616545 616868 . + 0 ID=Thaps263118;Parent=Thaps263118;rank=2 chr7 . exon 616545 616868 . + . ID=Thaps263118.2;Parent=Thaps263118;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 609010 610561 . - . ID=Thaps6837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMM1];external_name=Thaps6837;logic_name=jgi_thaps3 chr7 ensembl transcript 609010 610561 . - . ID=Thaps6837;Parent=Thaps6837;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 609010 609647 . - 0 ID=Thaps6837;Parent=Thaps6837;rank=2 chr7 . exon 609010 609647 . - . ID=Thaps6837.2;Parent=Thaps6837;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 609727 610561 . - 0 ID=Thaps6837;Parent=Thaps6837;rank=1 chr7 . exon 609727 610561 . - . ID=Thaps6837.1;Parent=Thaps6837;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 610989 613469 . - . ID=Thaps6838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMM2];external_name=Thaps6838;logic_name=jgi_thaps3 chr7 ensembl transcript 610989 613469 . - . ID=Thaps6838;Parent=Thaps6838;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 610989 613469 . - 0 ID=Thaps6838;Parent=Thaps6838;rank=1 chr7 . exon 610989 613469 . - . ID=Thaps6838.1;Parent=Thaps6838;constitutive=1;rank=1 chr7 . repeat_region 624472 624505 . ? . description=dust chr7 . repeat_region 624474 624505 . ? . description=trf chr7 ensembl protein_coding_gene 622455 623354 . - . ID=Thaps35561;biotype=protein_coding;description=Arg1 arginase 1 [Source:UniProtKB/TrEMBL%3BAcc:B5YMM5];external_name=Thaps35561;logic_name=jgi_thaps3 chr7 ensembl transcript 622455 623354 . - . ID=Thaps35561;Parent=Thaps35561;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 622455 623354 . - 0 ID=Thaps35561;Parent=Thaps35561;rank=1 chr7 . exon 622455 623354 . - . ID=Thaps35561.1;Parent=Thaps35561;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 618683 620856 . + . ID=Thaps574;biotype=protein_coding;external_name=Thaps574;logic_name=jgi_thaps3 chr7 ensembl transcript 618683 620856 . + . ID=Thaps574;Parent=Thaps574;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 618683 620177 . + 0 ID=Thaps574;Parent=Thaps574;rank=1 chr7 . exon 618683 620177 . + . ID=Thaps574.1;Parent=Thaps574;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 620323 620326 . + 0 ID=Thaps574;Parent=Thaps574;rank=2 chr7 . exon 620323 620326 . + . ID=Thaps574.2;Parent=Thaps574;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 620391 620856 . + 0 ID=Thaps574;Parent=Thaps574;rank=3 chr7 . exon 620391 620856 . + . ID=Thaps574.3;Parent=Thaps574;constitutive=1;ensembl_end_phase=1;rank=3 chr7 ensembl protein_coding_gene 625008 625811 . + . ID=Thaps6842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMM6];external_name=Thaps6842;logic_name=jgi_thaps3 chr7 ensembl transcript 625008 625811 . + . ID=Thaps6842;Parent=Thaps6842;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 625008 625811 . + 0 ID=Thaps6842;Parent=Thaps6842;rank=1 chr7 . exon 625008 625811 . + . ID=Thaps6842.1;Parent=Thaps6842;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 626325 629650 . + . ID=Thaps6843;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMM7];external_name=Thaps6843;logic_name=jgi_thaps3 chr7 ensembl transcript 626325 629650 . + . ID=Thaps6843;Parent=Thaps6843;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 626325 626582 . + 0 ID=Thaps6843;Parent=Thaps6843;rank=1 chr7 . exon 626325 626582 . + . ID=Thaps6843.1;Parent=Thaps6843;constitutive=1;rank=1 chr7 . CDS 626756 626813 . + 0 ID=Thaps6843;Parent=Thaps6843;rank=2 chr7 . exon 626756 626813 . + . ID=Thaps6843.2;Parent=Thaps6843;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 626952 628069 . + 0 ID=Thaps6843;Parent=Thaps6843;rank=3 chr7 . exon 626952 628069 . + . ID=Thaps6843.3;Parent=Thaps6843;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 628244 629360 . + 0 ID=Thaps6843;Parent=Thaps6843;rank=4 chr7 . CDS 629454 629650 . + 0 ID=Thaps6843;Parent=Thaps6843;rank=5 chr7 ensembl protein_coding_gene 634049 635050 . - . ID=Thaps263121;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMM8];external_name=Thaps263121;logic_name=jgi_thaps3 chr7 ensembl transcript 634049 635050 . - . ID=Thaps263121;Parent=Thaps263121;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 634049 635050 . - 0 ID=Thaps263121;Parent=Thaps263121;rank=1 chr7 . exon 634049 635050 . - . ID=Thaps263121.1;Parent=Thaps263121;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 636822 638367 . + . ID=Thaps263122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMM9];external_name=Thaps263122;logic_name=jgi_thaps3 chr7 ensembl transcript 636822 638367 . + . ID=Thaps263122;Parent=Thaps263122;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 636822 637705 . + 0 ID=Thaps263122;Parent=Thaps263122;rank=1 chr7 . exon 636822 637705 . + . ID=Thaps263122.1;Parent=Thaps263122;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 637801 638070 . + 0 ID=Thaps263122;Parent=Thaps263122;rank=2 chr7 . CDS 638109 638113 . + 0 ID=Thaps263122;Parent=Thaps263122;rank=3 chr7 . CDS 638127 638367 . + 0 ID=Thaps263122;Parent=Thaps263122;rank=4 chr7 . exon 628244 629360 . + . ID=Thaps6843.4;Parent=Thaps6843;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . exon 629454 629650 . + . ID=Thaps6843.5;Parent=Thaps6843;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . repeat_region 640445 640454 . ? . description=dust chr7 . repeat_region 646127 646197 . + . description=scaffold_2_728_1_1722201_1723444 chr7 ensembl protein_coding_gene 639571 640415 . - . ID=Thaps23414;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMN0];external_name=Thaps23414;logic_name=jgi_thaps3 chr7 ensembl transcript 639571 640415 . - . ID=Thaps23414;Parent=Thaps23414;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 639571 639690 . - 0 ID=Thaps23414;Parent=Thaps23414;rank=3 chr7 . exon 639571 639690 . - . ID=Thaps23414.3;Parent=Thaps23414;constitutive=1;rank=3 chr7 . CDS 639821 639889 . - 0 ID=Thaps23414;Parent=Thaps23414;rank=2 chr7 . exon 639821 639889 . - . ID=Thaps23414.2;Parent=Thaps23414;constitutive=1;rank=2 chr7 . CDS 640311 640415 . - 0 ID=Thaps23414;Parent=Thaps23414;rank=1 chr7 . exon 640311 640415 . - . ID=Thaps23414.1;Parent=Thaps23414;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 645086 647331 . + . ID=Thaps23415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMN3];external_name=Thaps23415;logic_name=jgi_thaps3 chr7 ensembl transcript 645086 647331 . + . ID=Thaps23415;Parent=Thaps23415;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 645086 645170 . + 0 ID=Thaps23415;Parent=Thaps23415;rank=1 chr7 . exon 645086 645170 . + . ID=Thaps23415.1;Parent=Thaps23415;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 645249 646099 . + 0 ID=Thaps23415;Parent=Thaps23415;rank=2 chr7 . exon 645249 646099 . + . ID=Thaps23415.2;Parent=Thaps23415;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 646292 646544 . + 0 ID=Thaps23415;Parent=Thaps23415;rank=3 chr7 . exon 646292 646544 . + . ID=Thaps23415.3;Parent=Thaps23415;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 646718 647331 . + 0 ID=Thaps23415;Parent=Thaps23415;rank=4 chr7 . exon 646718 647331 . + . ID=Thaps23415.4;Parent=Thaps23415;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . exon 637801 638070 . + . ID=Thaps263122.2;Parent=Thaps263122;constitutive=1;rank=2 chr7 . exon 638109 638113 . + . ID=Thaps263122.3;Parent=Thaps263122;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 638127 638367 . + . ID=Thaps263122.4;Parent=Thaps263122;constitutive=1;ensembl_end_phase=1;rank=4 chr7 ensembl protein_coding_gene 641656 642288 . + . ID=Thaps263123;biotype=protein_coding;description=A regulator of G-protein signaling domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMN1];external_name=Thaps263123;logic_name=jgi_thaps3 chr7 ensembl transcript 641656 642288 . + . ID=Thaps263123;Parent=Thaps263123;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 641656 641846 . + 0 ID=Thaps263123;Parent=Thaps263123;rank=1 chr7 . exon 641656 641846 . + . ID=Thaps263123.1;Parent=Thaps263123;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 641918 641965 . + 0 ID=Thaps263123;Parent=Thaps263123;rank=2 chr7 . exon 641918 641965 . + . ID=Thaps263123.2;Parent=Thaps263123;constitutive=1;rank=2 chr7 . CDS 642059 642288 . + 0 ID=Thaps263123;Parent=Thaps263123;rank=3 chr7 . exon 642059 642288 . + . ID=Thaps263123.3;Parent=Thaps263123;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 643715 644845 . - . ID=Thaps6848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMN2];external_name=Thaps6848;logic_name=jgi_thaps3 chr7 ensembl transcript 643715 644845 . - . ID=Thaps6848;Parent=Thaps6848;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 643715 644845 . - 0 ID=Thaps6848;Parent=Thaps6848;rank=1 chr7 . exon 643715 644845 . - . ID=Thaps6848.1;Parent=Thaps6848;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 647376 647738 . - . ID=Thaps6850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMN4];external_name=Thaps6850;logic_name=jgi_thaps3 chr7 ensembl transcript 647376 647738 . - . ID=Thaps6850;Parent=Thaps6850;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 647376 647738 . - 0 ID=Thaps6850;Parent=Thaps6850;rank=1 chr7 . exon 647376 647738 . - . ID=Thaps6850.1;Parent=Thaps6850;constitutive=1;rank=1 chr7 . repeat_region 655078 655114 . ? . description=trf chr7 ensembl protein_coding_gene 649640 651805 . + . ID=Thaps23416;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMN6];external_name=Thaps23416;logic_name=jgi_thaps3 chr7 ensembl transcript 649640 651805 . + . ID=Thaps23416;Parent=Thaps23416;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 649640 649840 . + 0 ID=Thaps23416;Parent=Thaps23416;rank=1 chr7 . exon 649640 649840 . + . ID=Thaps23416.1;Parent=Thaps23416;constitutive=1;rank=1 chr7 . CDS 649951 650307 . + 0 ID=Thaps23416;Parent=Thaps23416;rank=2 chr7 . exon 649951 650307 . + . ID=Thaps23416.2;Parent=Thaps23416;constitutive=1;rank=2 chr7 . CDS 650402 651805 . + 0 ID=Thaps23416;Parent=Thaps23416;rank=3 chr7 . exon 650402 651805 . + . ID=Thaps23416.3;Parent=Thaps23416;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 652070 653203 . + . ID=Thaps23417;biotype=protein_coding;description=Urea transporter [Source:UniProtKB/TrEMBL%3BAcc:B5YMN7];external_name=Thaps23417;logic_name=jgi_thaps3 chr7 ensembl transcript 652070 653203 . + . ID=Thaps23417;Parent=Thaps23417;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 652070 653203 . + 0 ID=Thaps23417;Parent=Thaps23417;rank=1 chr7 . exon 652070 653203 . + . ID=Thaps23417.1;Parent=Thaps23417;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 653304 654095 . - . ID=Thaps23418;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMN8];external_name=Thaps23418;logic_name=jgi_thaps3 chr7 ensembl transcript 653304 654095 . - . ID=Thaps23418;Parent=Thaps23418;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 653304 654095 . - 0 ID=Thaps23418;Parent=Thaps23418;rank=1 chr7 . exon 653304 654095 . - . ID=Thaps23418.1;Parent=Thaps23418;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 654451 658020 . - . ID=Thaps23419;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMN9];external_name=Thaps23419;logic_name=jgi_thaps3 chr7 ensembl transcript 654451 658020 . - . ID=Thaps23419;Parent=Thaps23419;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 654451 658020 . - 0 ID=Thaps23419;Parent=Thaps23419;rank=1 chr7 . exon 654451 658020 . - . ID=Thaps23419.1;Parent=Thaps23419;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 648267 648791 . + . ID=Thaps263124;biotype=protein_coding;description=U1 small nuclear ribonucleoprotein%2C U1sRNP protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMN5];external_name=Thaps263124;logic_name=jgi_thaps3 chr7 ensembl transcript 648267 648791 . + . ID=Thaps263124;Parent=Thaps263124;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 648267 648791 . + 0 ID=Thaps263124;Parent=Thaps263124;rank=1 chr7 . exon 648267 648791 . + . ID=Thaps263124.1;Parent=Thaps263124;constitutive=1;rank=1 chr7 . repeat_region 658720 658739 . ? . description=dust chr7 ensembl protein_coding_gene 662061 664421 . + . ID=Thaps23420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMP2];external_name=Thaps23420;logic_name=jgi_thaps3 chr7 ensembl transcript 662061 664421 . + . ID=Thaps23420;Parent=Thaps23420;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 662061 664421 . + 0 ID=Thaps23420;Parent=Thaps23420;rank=1 chr7 . exon 662061 664421 . + . ID=Thaps23420.1;Parent=Thaps23420;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 664613 665971 . + . ID=Thaps23421;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMP3];external_name=Thaps23421;logic_name=jgi_thaps3 chr7 ensembl transcript 664613 665971 . + . ID=Thaps23421;Parent=Thaps23421;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 664613 665971 . + 0 ID=Thaps23421;Parent=Thaps23421;rank=1 chr7 . exon 664613 665971 . + . ID=Thaps23421.1;Parent=Thaps23421;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 667268 668479 . + . ID=Thaps263127;biotype=protein_coding;description=Ser/thr kinase [Source:UniProtKB/TrEMBL%3BAcc:B5YMP4];external_name=Thaps263127;logic_name=jgi_thaps3 chr7 ensembl transcript 667268 668479 . + . ID=Thaps263127;Parent=Thaps263127;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 667268 667408 . + 0 ID=Thaps263127;Parent=Thaps263127;rank=1 chr7 . exon 667268 667408 . + . ID=Thaps263127.1;Parent=Thaps263127;constitutive=1;rank=1 chr7 . CDS 667445 667617 . + 0 ID=Thaps263127;Parent=Thaps263127;rank=2 chr7 . exon 667445 667617 . + . ID=Thaps263127.2;Parent=Thaps263127;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 667678 667904 . + 0 ID=Thaps263127;Parent=Thaps263127;rank=3 chr7 . CDS 667991 668088 . + 0 ID=Thaps263127;Parent=Thaps263127;rank=4 chr7 . CDS 668441 668479 . + 0 ID=Thaps263127;Parent=Thaps263127;rank=5 chr7 ensembl protein_coding_gene 658510 659973 . + . ID=Thaps6856;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMP0];external_name=Thaps6856;logic_name=jgi_thaps3 chr7 ensembl transcript 658510 659973 . + . ID=Thaps6856;Parent=Thaps6856;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 658510 659973 . + 0 ID=Thaps6856;Parent=Thaps6856;rank=1 chr7 . exon 658510 659973 . + . ID=Thaps6856.1;Parent=Thaps6856;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 660471 661460 . - . ID=Thaps6857;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMP1];external_name=Thaps6857;logic_name=jgi_thaps3 chr7 ensembl transcript 660471 661460 . - . ID=Thaps6857;Parent=Thaps6857;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 660471 661460 . - 0 ID=Thaps6857;Parent=Thaps6857;rank=1 chr7 . exon 660471 661460 . - . ID=Thaps6857.1;Parent=Thaps6857;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 670119 670727 . - . ID=Thaps17439;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMP6];external_name=Thaps17439;logic_name=jgi_thaps3 chr7 ensembl transcript 670119 670727 . - . ID=Thaps17439;Parent=Thaps17439;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 670119 670727 . - 0 ID=Thaps17439;Parent=Thaps17439;rank=1 chr7 . exon 670119 670727 . - . ID=Thaps17439.1;Parent=Thaps17439;constitutive=1;rank=1 chr7 . exon 667678 667904 . + . ID=Thaps263127.3;Parent=Thaps263127;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 667991 668088 . + . ID=Thaps263127.4;Parent=Thaps263127;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . exon 668441 668479 . + . ID=Thaps263127.5;Parent=Thaps263127;constitutive=1;rank=5 chr7 ensembl protein_coding_gene 668839 669310 . - . ID=Thaps263128;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMP5];external_name=Thaps263128;logic_name=jgi_thaps3 chr7 ensembl transcript 668839 669310 . - . ID=Thaps263128;Parent=Thaps263128;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 668839 668924 . - 0 ID=Thaps263128;Parent=Thaps263128;rank=2 chr7 . exon 668839 668924 . - . ID=Thaps263128.2;Parent=Thaps263128;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 669019 669310 . - 0 ID=Thaps263128;Parent=Thaps263128;rank=1 chr7 . exon 669019 669310 . - . ID=Thaps263128.1;Parent=Thaps263128;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl gene 672389 676007 . + . ID=Thaps263129;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 672389 676007 . + . ID=Thaps263129;Parent=Thaps263129;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 672389 672528 . + . ID=Thaps263129.1;Parent=Thaps263129;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . exon 672608 673472 . + . ID=Thaps263129.2;Parent=Thaps263129;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 673550 674062 . + . ID=Thaps263129.3;Parent=Thaps263129;constitutive=1;rank=3 chr7 . exon 674145 674456 . + . ID=Thaps263129.4;Parent=Thaps263129;constitutive=1;rank=4 chr7 . exon 674527 674769 . + . ID=Thaps263129.5;Parent=Thaps263129;constitutive=1;rank=5 chr7 . exon 674843 674906 . + . ID=Thaps263129.6;Parent=Thaps263129;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . exon 674990 675198 . + . ID=Thaps263129.7;Parent=Thaps263129;constitutive=1;ensembl_end_phase=2;rank=7 chr7 . exon 675283 675533 . + . ID=Thaps263129.8;Parent=Thaps263129;constitutive=1;ensembl_end_phase=2;rank=8 chr7 . exon 675626 676007 . + . ID=Thaps263129.9;Parent=Thaps263129;constitutive=1;ensembl_end_phase=1;rank=9 chr7 ensembl protein_coding_gene 676135 678303 . - . ID=Thaps41306;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMP7];external_name=Thaps41306;logic_name=jgi_thaps3 chr7 ensembl transcript 676135 678303 . - . ID=Thaps41306;Parent=Thaps41306;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 676135 677987 . - 0 ID=Thaps41306;Parent=Thaps41306;rank=2 chr7 . exon 676135 677987 . - . ID=Thaps41306.2;Parent=Thaps41306;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 678162 678303 . - 0 ID=Thaps41306;Parent=Thaps41306;rank=1 chr7 . repeat_region 678397 678459 . ? . description=dust chr7 ensembl protein_coding_gene 679470 680210 . + . ID=Thaps23427;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMP8];external_name=Thaps23427;logic_name=jgi_thaps3 chr7 ensembl transcript 679470 680210 . + . ID=Thaps23427;Parent=Thaps23427;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 679470 680210 . + 0 ID=Thaps23427;Parent=Thaps23427;rank=1 chr7 . exon 679470 680210 . + . ID=Thaps23427.1;Parent=Thaps23427;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 680732 682906 . + . ID=Thaps23428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMP9];external_name=Thaps23428;logic_name=jgi_thaps3 chr7 ensembl transcript 680732 682906 . + . ID=Thaps23428;Parent=Thaps23428;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 680732 682906 . + 0 ID=Thaps23428;Parent=Thaps23428;rank=1 chr7 . exon 680732 682906 . + . ID=Thaps23428.1;Parent=Thaps23428;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 685301 686388 . - . ID=Thaps263132;biotype=protein_coding;description=Phytochelatin synthase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ1];external_name=Thaps263132;logic_name=jgi_thaps3 chr7 ensembl transcript 685301 686388 . - . ID=Thaps263132;Parent=Thaps263132;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 685301 685818 . - 0 ID=Thaps263132;Parent=Thaps263132;rank=2 chr7 . exon 685301 685818 . - . ID=Thaps263132.2;Parent=Thaps263132;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 685885 686388 . - 0 ID=Thaps263132;Parent=Thaps263132;rank=1 chr7 . exon 685885 686388 . - . ID=Thaps263132.1;Parent=Thaps263132;constitutive=1;rank=1 chr7 . exon 678162 678303 . - . ID=Thaps41306.1;Parent=Thaps41306;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 683060 684411 . - . ID=Thaps575;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ0];external_name=Thaps575;logic_name=jgi_thaps3 chr7 ensembl transcript 683060 684411 . - . ID=Thaps575;Parent=Thaps575;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 683060 684093 . - 0 ID=Thaps575;Parent=Thaps575;rank=2 chr7 . exon 683060 684093 . - . ID=Thaps575.2;Parent=Thaps575;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 684210 684411 . - 0 ID=Thaps575;Parent=Thaps575;rank=1 chr7 . exon 684210 684411 . - . ID=Thaps575.1;Parent=Thaps575;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 688759 688794 . ? . description=trf chr7 . repeat_region 688877 688926 . ? . description=trf chr7 ensembl protein_coding_gene 691810 692919 . - . ID=Thaps23431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ3];external_name=Thaps23431;logic_name=jgi_thaps3 chr7 ensembl transcript 691810 692919 . - . ID=Thaps23431;Parent=Thaps23431;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 691810 692919 . - 0 ID=Thaps23431;Parent=Thaps23431;rank=1 chr7 . exon 691810 692919 . - . ID=Thaps23431.1;Parent=Thaps23431;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 693533 696924 . + . ID=Thaps23432;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ4];external_name=Thaps23432;logic_name=jgi_thaps3 chr7 ensembl transcript 693533 696924 . + . ID=Thaps23432;Parent=Thaps23432;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 693533 694301 . + 0 ID=Thaps23432;Parent=Thaps23432;rank=1 chr7 . exon 693533 694301 . + . ID=Thaps23432.1;Parent=Thaps23432;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 694356 695192 . + 0 ID=Thaps23432;Parent=Thaps23432;rank=2 chr7 . exon 694356 695192 . + . ID=Thaps23432.2;Parent=Thaps23432;constitutive=1;rank=2 chr7 . CDS 695303 696458 . + 0 ID=Thaps23432;Parent=Thaps23432;rank=3 chr7 . exon 695303 696458 . + . ID=Thaps23432.3;Parent=Thaps23432;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 696540 696612 . + 0 ID=Thaps23432;Parent=Thaps23432;rank=4 chr7 . exon 696540 696612 . + . ID=Thaps23432.4;Parent=Thaps23432;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 696709 696924 . + 0 ID=Thaps23432;Parent=Thaps23432;rank=5 chr7 . exon 696709 696924 . + . ID=Thaps23432.5;Parent=Thaps23432;constitutive=1;rank=5 chr7 ensembl protein_coding_gene 689130 691151 . - . ID=Thaps269231;biotype=protein_coding;description=Transporter belonging to the MFS superfamily [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ2];external_name=Thaps269231;logic_name=jgi_thaps3 chr7 ensembl transcript 689130 691151 . - . ID=Thaps269231;Parent=Thaps269231;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 689130 690259 . - 0 ID=Thaps269231;Parent=Thaps269231;rank=4 chr7 . exon 689130 690259 . - . ID=Thaps269231.4;Parent=Thaps269231;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 690343 690452 . - 0 ID=Thaps269231;Parent=Thaps269231;rank=3 chr7 . exon 690343 690452 . - . ID=Thaps269231.3;Parent=Thaps269231;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 690530 690747 . - 0 ID=Thaps269231;Parent=Thaps269231;rank=2 chr7 . exon 690530 690747 . - . ID=Thaps269231.2;Parent=Thaps269231;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 690861 691151 . - 0 ID=Thaps269231;Parent=Thaps269231;rank=1 chr7 . exon 690861 691151 . - . ID=Thaps269231.1;Parent=Thaps269231;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 697029 697928 . - . ID=Thaps6873;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ5];external_name=Thaps6873;logic_name=jgi_thaps3 chr7 ensembl transcript 697029 697928 . - . ID=Thaps6873;Parent=Thaps6873;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 697029 697928 . - 0 ID=Thaps6873;Parent=Thaps6873;rank=1 chr7 . exon 697029 697928 . - . ID=Thaps6873.1;Parent=Thaps6873;constitutive=1;rank=1 chr7 . biological_region 704603 704606 0.999 - . logic_name=eponine chr7 ensembl protein_coding_gene 705973 707758 . - . ID=Thaps23433;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ9];external_name=Thaps23433;logic_name=jgi_thaps3 chr7 ensembl transcript 705973 707758 . - . ID=Thaps23433;Parent=Thaps23433;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 705973 706264 . - 0 ID=Thaps23433;Parent=Thaps23433;rank=2 chr7 . exon 705973 706264 . - . ID=Thaps23433.2;Parent=Thaps23433;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 706350 707758 . - 0 ID=Thaps23433;Parent=Thaps23433;rank=1 chr7 . exon 706350 707758 . - . ID=Thaps23433.1;Parent=Thaps23433;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 698392 700345 . + . ID=Thaps6874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ6];external_name=Thaps6874;logic_name=jgi_thaps3 chr7 ensembl transcript 698392 700345 . + . ID=Thaps6874;Parent=Thaps6874;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 698392 700296 . + 0 ID=Thaps6874;Parent=Thaps6874;rank=1 chr7 . exon 698392 700296 . + . ID=Thaps6874.1;Parent=Thaps6874;constitutive=1;rank=1 chr7 . CDS 700328 700345 . + 0 ID=Thaps6874;Parent=Thaps6874;rank=2 chr7 . exon 700328 700345 . + . ID=Thaps6874.2;Parent=Thaps6874;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 700419 701762 . - . ID=Thaps6875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ7];external_name=Thaps6875;logic_name=jgi_thaps3 chr7 ensembl transcript 700419 701762 . - . ID=Thaps6875;Parent=Thaps6875;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 700419 701762 . - 0 ID=Thaps6875;Parent=Thaps6875;rank=1 chr7 . exon 700419 701762 . - . ID=Thaps6875.1;Parent=Thaps6875;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 705043 705783 . + . ID=Thaps6876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMQ8];external_name=Thaps6876;logic_name=jgi_thaps3 chr7 ensembl transcript 705043 705783 . + . ID=Thaps6876;Parent=Thaps6876;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 705043 705783 . + 0 ID=Thaps6876;Parent=Thaps6876;rank=1 chr7 . exon 705043 705783 . + . ID=Thaps6876.1;Parent=Thaps6876;constitutive=1;rank=1 chr7 . repeat_region 707823 707847 . ? . description=trf chr7 . repeat_region 714806 714830 . ? . description=trf chr7 ensembl protein_coding_gene 707840 710941 . + . ID=Thaps23434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMR0];external_name=Thaps23434;logic_name=jgi_thaps3 chr7 ensembl transcript 707840 710941 . + . ID=Thaps23434;Parent=Thaps23434;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 707840 707949 . + 0 ID=Thaps23434;Parent=Thaps23434;rank=1 chr7 . exon 707840 707949 . + . ID=Thaps23434.1;Parent=Thaps23434;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 707999 708077 . + 0 ID=Thaps23434;Parent=Thaps23434;rank=2 chr7 . exon 707999 708077 . + . ID=Thaps23434.2;Parent=Thaps23434;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 708179 709246 . + 0 ID=Thaps23434;Parent=Thaps23434;rank=3 chr7 . exon 708179 709246 . + . ID=Thaps23434.3;Parent=Thaps23434;constitutive=1;rank=3 chr7 . CDS 709307 709383 . + 0 ID=Thaps23434;Parent=Thaps23434;rank=4 chr7 . exon 709307 709383 . + . ID=Thaps23434.4;Parent=Thaps23434;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 709458 710276 . + 0 ID=Thaps23434;Parent=Thaps23434;rank=5 chr7 . exon 709458 710276 . + . ID=Thaps23434.5;Parent=Thaps23434;constitutive=1;rank=5 chr7 . CDS 710335 710941 . + 0 ID=Thaps23434;Parent=Thaps23434;rank=6 chr7 . exon 710335 710941 . + . ID=Thaps23434.6;Parent=Thaps23434;constitutive=1;ensembl_end_phase=1;rank=6 chr7 ensembl protein_coding_gene 712503 714264 . + . ID=Thaps6879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMR1];external_name=Thaps6879;logic_name=jgi_thaps3 chr7 ensembl transcript 712503 714264 . + . ID=Thaps6879;Parent=Thaps6879;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 712503 712830 . + 0 ID=Thaps6879;Parent=Thaps6879;rank=1 chr7 . exon 712503 712830 . + . ID=Thaps6879.1;Parent=Thaps6879;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 712901 712996 . + 0 ID=Thaps6879;Parent=Thaps6879;rank=2 chr7 . exon 712901 712996 . + . ID=Thaps6879.2;Parent=Thaps6879;constitutive=1;rank=2 chr7 . CDS 713193 714016 . + 0 ID=Thaps6879;Parent=Thaps6879;rank=3 chr7 . exon 713193 714016 . + . ID=Thaps6879.3;Parent=Thaps6879;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 714226 714264 . + 0 ID=Thaps6879;Parent=Thaps6879;rank=4 chr7 . exon 714226 714264 . + . ID=Thaps6879.4;Parent=Thaps6879;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 714569 717605 . - . ID=Thaps6880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMR2];external_name=Thaps6880;logic_name=jgi_thaps3 chr7 ensembl transcript 714569 717605 . - . ID=Thaps6880;Parent=Thaps6880;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 714569 714676 . - 0 ID=Thaps6880;Parent=Thaps6880;rank=6 chr7 . exon 714569 714676 . - . ID=Thaps6880.6;Parent=Thaps6880;constitutive=1;rank=6 chr7 . CDS 714744 714788 . - 0 ID=Thaps6880;Parent=Thaps6880;rank=5 chr7 . exon 714744 714788 . - . ID=Thaps6880.5;Parent=Thaps6880;constitutive=1;rank=5 chr7 . CDS 714884 715312 . - 0 ID=Thaps6880;Parent=Thaps6880;rank=4 chr7 . exon 714884 715312 . - . ID=Thaps6880.4;Parent=Thaps6880;constitutive=1;rank=4 chr7 . CDS 715364 716477 . - 0 ID=Thaps6880;Parent=Thaps6880;rank=3 chr7 . exon 715364 716477 . - . ID=Thaps6880.3;Parent=Thaps6880;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 716577 717062 . - 0 ID=Thaps6880;Parent=Thaps6880;rank=2 chr7 . exon 716577 717062 . - . ID=Thaps6880.2;Parent=Thaps6880;constitutive=1;rank=2 chr7 . CDS 717136 717605 . - 0 ID=Thaps6880;Parent=Thaps6880;rank=1 chr7 . exon 717136 717605 . - . ID=Thaps6880.1;Parent=Thaps6880;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . repeat_region 721931 721938 . ? . description=dust chr7 ensembl protein_coding_gene 720294 721310 . - . ID=Thaps263135;biotype=protein_coding;description=V-type H-ATPase subunit H [Source:UniProtKB/TrEMBL%3BAcc:B5YMR4];external_name=Thaps263135;logic_name=jgi_thaps3 chr7 ensembl transcript 720294 721310 . - . ID=Thaps263135;Parent=Thaps263135;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 720294 720506 . - 0 ID=Thaps263135;Parent=Thaps263135;rank=3 chr7 . exon 720294 720506 . - . ID=Thaps263135.3;Parent=Thaps263135;constitutive=1;rank=3 chr7 . CDS 720603 721119 . - 0 ID=Thaps263135;Parent=Thaps263135;rank=2 chr7 . exon 720603 721119 . - . ID=Thaps263135.2;Parent=Thaps263135;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 721144 721310 . - 0 ID=Thaps263135;Parent=Thaps263135;rank=1 chr7 . exon 721144 721310 . - . ID=Thaps263135.1;Parent=Thaps263135;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 719183 719371 . + . ID=Thaps35231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMR3];external_name=Thaps35231;logic_name=jgi_thaps3 chr7 ensembl transcript 719183 719371 . + . ID=Thaps35231;Parent=Thaps35231;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 719183 719371 . + 0 ID=Thaps35231;Parent=Thaps35231;rank=1 chr7 . exon 719183 719371 . + . ID=Thaps35231.1;Parent=Thaps35231;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 723465 727148 . + . ID=Thaps6883;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMR5];external_name=Thaps6883;logic_name=jgi_thaps3 chr7 ensembl transcript 723465 727148 . + . ID=Thaps6883;Parent=Thaps6883;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 723465 724830 . + 0 ID=Thaps6883;Parent=Thaps6883;rank=1 chr7 . exon 723465 724830 . + . ID=Thaps6883.1;Parent=Thaps6883;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 724939 725707 . + 0 ID=Thaps6883;Parent=Thaps6883;rank=2 chr7 . exon 724939 725707 . + . ID=Thaps6883.2;Parent=Thaps6883;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 725810 725858 . + 0 ID=Thaps6883;Parent=Thaps6883;rank=3 chr7 . exon 725810 725858 . + . ID=Thaps6883.3;Parent=Thaps6883;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 725940 727148 . + 0 ID=Thaps6883;Parent=Thaps6883;rank=4 chr7 . exon 725940 727148 . + . ID=Thaps6883.4;Parent=Thaps6883;constitutive=1;rank=4 chr7 . repeat_region 730820 730941 . ? . description=trf chr7 . repeat_region 736190 736240 . ? . description=trf chr7 ensembl protein_coding_gene 729623 730390 . - . ID=Thaps16743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMR7];external_name=Thaps16743;logic_name=jgi_thaps3 chr7 ensembl transcript 729623 730390 . - . ID=Thaps16743;Parent=Thaps16743;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 729623 730390 . - 0 ID=Thaps16743;Parent=Thaps16743;rank=1 chr7 . exon 729623 730390 . - . ID=Thaps16743.1;Parent=Thaps16743;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 727341 728819 . - . ID=Thaps269232;biotype=protein_coding;description=EF containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMR6];external_name=Thaps269232;logic_name=jgi_thaps3 chr7 ensembl transcript 727341 728819 . - . ID=Thaps269232;Parent=Thaps269232;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 727341 727820 . - 0 ID=Thaps269232;Parent=Thaps269232;rank=3 chr7 . exon 727341 727820 . - . ID=Thaps269232.3;Parent=Thaps269232;constitutive=1;rank=3 chr7 . CDS 727860 728350 . - 0 ID=Thaps269232;Parent=Thaps269232;rank=2 chr7 . exon 727860 728350 . - . ID=Thaps269232.2;Parent=Thaps269232;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 728486 728819 . - 0 ID=Thaps269232;Parent=Thaps269232;rank=1 chr7 . exon 728486 728819 . - . ID=Thaps269232.1;Parent=Thaps269232;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 736340 737324 . + . ID=Thaps269233;biotype=protein_coding;description=HSF36%2C heat shock transcription factor DNA-binding domain-containing protein%2C DNA binding%2C transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B5YMS0];external_name=HSF36;logic_name=jgi_thaps3 chr7 ensembl transcript 736340 737324 . + . ID=Thaps269233;Parent=Thaps269233;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 736340 736874 . + 0 ID=Thaps269233;Parent=Thaps269233;rank=1 chr7 . exon 736340 736874 . + . ID=Thaps269233.1;Parent=Thaps269233;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 737092 737324 . + 0 ID=Thaps269233;Parent=Thaps269233;rank=2 chr7 . exon 737092 737324 . + . ID=Thaps269233.2;Parent=Thaps269233;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 731600 732508 . + . ID=Thaps6885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMR8];external_name=Thaps6885;logic_name=jgi_thaps3 chr7 ensembl transcript 731600 732508 . + . ID=Thaps6885;Parent=Thaps6885;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 731600 732508 . + 0 ID=Thaps6885;Parent=Thaps6885;rank=1 chr7 . exon 731600 732508 . + . ID=Thaps6885.1;Parent=Thaps6885;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 732658 734473 . - . ID=Thaps6886;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMR9];external_name=Thaps6886;logic_name=jgi_thaps3 chr7 ensembl transcript 732658 734473 . - . ID=Thaps6886;Parent=Thaps6886;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 732658 732684 . - 0 ID=Thaps6886;Parent=Thaps6886;rank=2 chr7 . exon 732658 732684 . - . ID=Thaps6886.2;Parent=Thaps6886;constitutive=1;rank=2 chr7 . CDS 732713 734473 . - 0 ID=Thaps6886;Parent=Thaps6886;rank=1 chr7 . exon 732713 734473 . - . ID=Thaps6886.1;Parent=Thaps6886;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 744056 750496 . + . ID=Thaps23437;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMS3];external_name=Thaps23437;logic_name=jgi_thaps3 chr7 ensembl transcript 744056 750496 . + . ID=Thaps23437;Parent=Thaps23437;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 744056 745774 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=1 chr7 . exon 744056 745774 . + . ID=Thaps23437.1;Parent=Thaps23437;constitutive=1;rank=1 chr7 . CDS 745856 746095 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=2 chr7 . exon 745856 746095 . + . ID=Thaps23437.2;Parent=Thaps23437;constitutive=1;rank=2 chr7 . CDS 746168 746460 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=3 chr7 . exon 746168 746460 . + . ID=Thaps23437.3;Parent=Thaps23437;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 746576 746924 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=4 chr7 . exon 746576 746924 . + . ID=Thaps23437.4;Parent=Thaps23437;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 746994 747211 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=5 chr7 . exon 746994 747211 . + . ID=Thaps23437.5;Parent=Thaps23437;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 747637 747812 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=6 chr7 . CDS 747895 748318 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=7 chr7 . CDS 748393 748922 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=8 chr7 . CDS 748993 749084 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=9 chr7 . CDS 749115 749915 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=10 chr7 . CDS 749990 750496 . + 0 ID=Thaps23437;Parent=Thaps23437;rank=11 chr7 ensembl protein_coding_gene 738469 738807 . + . ID=Thaps263138;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMS1];external_name=Thaps263138;logic_name=jgi_thaps3 chr7 ensembl transcript 738469 738807 . + . ID=Thaps263138;Parent=Thaps263138;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 738469 738807 . + 0 ID=Thaps263138;Parent=Thaps263138;rank=1 chr7 . exon 738469 738807 . + . ID=Thaps263138.1;Parent=Thaps263138;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 741986 743107 . - . ID=Thaps6889;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMS2];external_name=Thaps6889;logic_name=jgi_thaps3 chr7 ensembl transcript 741986 743107 . - . ID=Thaps6889;Parent=Thaps6889;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 741986 743107 . - 0 ID=Thaps6889;Parent=Thaps6889;rank=1 chr7 . exon 741986 743107 . - . ID=Thaps6889.1;Parent=Thaps6889;constitutive=1;rank=1 chr7 . exon 747637 747812 . + . ID=Thaps23437.6;Parent=Thaps23437;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . exon 747895 748318 . + . ID=Thaps23437.7;Parent=Thaps23437;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . exon 748393 748922 . + . ID=Thaps23437.8;Parent=Thaps23437;constitutive=1;ensembl_end_phase=2;rank=8 chr7 . exon 748993 749084 . + . ID=Thaps23437.9;Parent=Thaps23437;constitutive=1;ensembl_end_phase=2;rank=9 chr7 . exon 749115 749915 . + . ID=Thaps23437.10;Parent=Thaps23437;constitutive=1;rank=10 chr7 . exon 749990 750496 . + . ID=Thaps23437.11;Parent=Thaps23437;constitutive=1;rank=11 chr7 ensembl protein_coding_gene 750834 752021 . - . ID=Thaps269235;biotype=protein_coding;description=RL3%2C ribosomal protein 3%2C 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YMS4];external_name=RL3;logic_name=jgi_thaps3 chr7 ensembl transcript 750834 752021 . - . ID=Thaps269235;Parent=Thaps269235;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 750834 752021 . - 0 ID=Thaps269235;Parent=Thaps269235;rank=1 chr7 . exon 750834 752021 . - . ID=Thaps269235.1;Parent=Thaps269235;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 753540 759669 . - . ID=Thaps6893;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMS5];external_name=Thaps6893;logic_name=jgi_thaps3 chr7 ensembl transcript 753540 759669 . - . ID=Thaps6893;Parent=Thaps6893;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 753540 754581 . - 0 ID=Thaps6893;Parent=Thaps6893;rank=6 chr7 . exon 753540 754581 . - . ID=Thaps6893.6;Parent=Thaps6893;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . CDS 754772 755197 . - 0 ID=Thaps6893;Parent=Thaps6893;rank=5 chr7 . exon 754772 755197 . - . ID=Thaps6893.5;Parent=Thaps6893;constitutive=1;rank=5 chr7 . CDS 755286 756764 . - 0 ID=Thaps6893;Parent=Thaps6893;rank=4 chr7 . exon 755286 756764 . - . ID=Thaps6893.4;Parent=Thaps6893;constitutive=1;rank=4 chr7 . CDS 756912 757489 . - 0 ID=Thaps6893;Parent=Thaps6893;rank=3 chr7 . exon 756912 757489 . - . ID=Thaps6893.3;Parent=Thaps6893;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 757570 758934 . - 0 ID=Thaps6893;Parent=Thaps6893;rank=2 chr7 . CDS 759100 759669 . - 0 ID=Thaps6893;Parent=Thaps6893;rank=1 chr7 . repeat_region 765091 765137 . ? . description=trf chr7 . exon 757570 758934 . - . ID=Thaps6893.2;Parent=Thaps6893;constitutive=1;rank=2 chr7 . exon 759100 759669 . - . ID=Thaps6893.1;Parent=Thaps6893;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 760150 761215 . - . ID=Thaps6894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMS6];external_name=Thaps6894;logic_name=jgi_thaps3 chr7 ensembl transcript 760150 761215 . - . ID=Thaps6894;Parent=Thaps6894;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 760150 760956 . - 0 ID=Thaps6894;Parent=Thaps6894;rank=2 chr7 . exon 760150 760956 . - . ID=Thaps6894.2;Parent=Thaps6894;constitutive=1;rank=2 chr7 . CDS 761072 761215 . - 0 ID=Thaps6894;Parent=Thaps6894;rank=1 chr7 . exon 761072 761215 . - . ID=Thaps6894.1;Parent=Thaps6894;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 761666 763960 . - . ID=Thaps6895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMS7];external_name=Thaps6895;logic_name=jgi_thaps3 chr7 ensembl transcript 761666 763960 . - . ID=Thaps6895;Parent=Thaps6895;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 761666 763960 . - 0 ID=Thaps6895;Parent=Thaps6895;rank=1 chr7 . exon 761666 763960 . - . ID=Thaps6895.1;Parent=Thaps6895;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 764307 766211 . - . ID=Thaps6896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMS8];external_name=Thaps6896;logic_name=jgi_thaps3 chr7 ensembl transcript 764307 766211 . - . ID=Thaps6896;Parent=Thaps6896;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 764307 766211 . - 0 ID=Thaps6896;Parent=Thaps6896;rank=1 chr7 . exon 764307 766211 . - . ID=Thaps6896.1;Parent=Thaps6896;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 766589 768262 . + . ID=Thaps6897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMS9];external_name=Thaps6897;logic_name=jgi_thaps3 chr7 ensembl transcript 766589 768262 . + . ID=Thaps6897;Parent=Thaps6897;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 766589 768262 . + 0 ID=Thaps6897;Parent=Thaps6897;rank=1 chr7 . exon 766589 768262 . + . ID=Thaps6897.1;Parent=Thaps6897;constitutive=1;rank=1 chr7 . repeat_region 776841 776853 . ? . description=dust chr7 ensembl protein_coding_gene 775262 776152 . - . ID=Thaps263142;biotype=protein_coding;description=RNA methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B5YMT3];external_name=Thaps263142;logic_name=jgi_thaps3 chr7 ensembl transcript 775262 776152 . - . ID=Thaps263142;Parent=Thaps263142;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 775262 775874 . - 0 ID=Thaps263142;Parent=Thaps263142;rank=2 chr7 . exon 775262 775874 . - . ID=Thaps263142.2;Parent=Thaps263142;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 775920 776152 . - 0 ID=Thaps263142;Parent=Thaps263142;rank=1 chr7 . exon 775920 776152 . - . ID=Thaps263142.1;Parent=Thaps263142;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 773605 775164 . + . ID=Thaps35420;biotype=protein_coding;description=Betaine aldehyde dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B5YMT2];external_name=Thaps35420;logic_name=jgi_thaps3 chr7 ensembl transcript 773605 775164 . + . ID=Thaps35420;Parent=Thaps35420;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 773605 775164 . + 0 ID=Thaps35420;Parent=Thaps35420;rank=1 chr7 . exon 773605 775164 . + . ID=Thaps35420.1;Parent=Thaps35420;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 771857 772895 . - . ID=Thaps41314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMT1];external_name=Thaps41314;logic_name=jgi_thaps3 chr7 ensembl transcript 771857 772895 . - . ID=Thaps41314;Parent=Thaps41314;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 771857 772158 . - 0 ID=Thaps41314;Parent=Thaps41314;rank=3 chr7 . exon 771857 772158 . - . ID=Thaps41314.3;Parent=Thaps41314;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 772253 772373 . - 0 ID=Thaps41314;Parent=Thaps41314;rank=2 chr7 . exon 772253 772373 . - . ID=Thaps41314.2;Parent=Thaps41314;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 772497 772895 . - 0 ID=Thaps41314;Parent=Thaps41314;rank=1 chr7 . exon 772497 772895 . - . ID=Thaps41314.1;Parent=Thaps41314;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 768603 771263 . + . ID=Thaps6898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMT0];external_name=Thaps6898;logic_name=jgi_thaps3 chr7 ensembl transcript 768603 771263 . + . ID=Thaps6898;Parent=Thaps6898;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 768603 769149 . + 0 ID=Thaps6898;Parent=Thaps6898;rank=1 chr7 . exon 768603 769149 . + . ID=Thaps6898.1;Parent=Thaps6898;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 769369 771263 . + 0 ID=Thaps6898;Parent=Thaps6898;rank=2 chr7 . exon 769369 771263 . + . ID=Thaps6898.2;Parent=Thaps6898;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 785127 787796 . - . ID=Thaps23441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMT6];external_name=Thaps23441;logic_name=jgi_thaps3 chr7 ensembl transcript 785127 787796 . - . ID=Thaps23441;Parent=Thaps23441;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 785127 787796 . - 0 ID=Thaps23441;Parent=Thaps23441;rank=1 chr7 . exon 785127 787796 . - . ID=Thaps23441.1;Parent=Thaps23441;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 779912 784288 . - . ID=Thaps35499;biotype=protein_coding;description=Smc1 [Source:UniProtKB/TrEMBL%3BAcc:B5YMT5];external_name=Thaps35499;logic_name=jgi_thaps3 chr7 ensembl transcript 779912 784288 . - . ID=Thaps35499;Parent=Thaps35499;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 779912 780662 . - 0 ID=Thaps35499;Parent=Thaps35499;rank=8 chr7 . exon 779912 780662 . - . ID=Thaps35499.8;Parent=Thaps35499;constitutive=1;ensembl_end_phase=1;rank=8 chr7 . CDS 780774 781092 . - 0 ID=Thaps35499;Parent=Thaps35499;rank=7 chr7 . exon 780774 781092 . - . ID=Thaps35499.7;Parent=Thaps35499;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . CDS 781145 782089 . - 0 ID=Thaps35499;Parent=Thaps35499;rank=6 chr7 . exon 781145 782089 . - . ID=Thaps35499.6;Parent=Thaps35499;constitutive=1;rank=6 chr7 . CDS 782176 782536 . - 0 ID=Thaps35499;Parent=Thaps35499;rank=5 chr7 . exon 782176 782536 . - . ID=Thaps35499.5;Parent=Thaps35499;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 782629 783339 . - 0 ID=Thaps35499;Parent=Thaps35499;rank=4 chr7 . exon 782629 783339 . - . ID=Thaps35499.4;Parent=Thaps35499;constitutive=1;rank=4 chr7 . CDS 783458 783616 . - 0 ID=Thaps35499;Parent=Thaps35499;rank=3 chr7 . exon 783458 783616 . - . ID=Thaps35499.3;Parent=Thaps35499;constitutive=1;rank=3 chr7 . CDS 783740 783975 . - 0 ID=Thaps35499;Parent=Thaps35499;rank=2 chr7 . exon 783740 783975 . - . ID=Thaps35499.2;Parent=Thaps35499;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 784048 784288 . - 0 ID=Thaps35499;Parent=Thaps35499;rank=1 chr7 . exon 784048 784288 . - . ID=Thaps35499.1;Parent=Thaps35499;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 778179 778901 . - . ID=Thaps35541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMT4];external_name=Thaps35541;logic_name=jgi_thaps3 chr7 ensembl transcript 778179 778901 . - . ID=Thaps35541;Parent=Thaps35541;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 778179 778901 . - 0 ID=Thaps35541;Parent=Thaps35541;rank=1 chr7 . exon 778179 778901 . - . ID=Thaps35541.1;Parent=Thaps35541;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 788531 791424 . - . ID=Thaps23442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMT7];external_name=Thaps23442;logic_name=jgi_thaps3 chr7 ensembl transcript 788531 791424 . - . ID=Thaps23442;Parent=Thaps23442;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 788531 788979 . - 0 ID=Thaps23442;Parent=Thaps23442;rank=6 chr7 . exon 788531 788979 . - . ID=Thaps23442.6;Parent=Thaps23442;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . CDS 789088 789889 . - 0 ID=Thaps23442;Parent=Thaps23442;rank=5 chr7 . exon 789088 789889 . - . ID=Thaps23442.5;Parent=Thaps23442;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 789958 790259 . - 0 ID=Thaps23442;Parent=Thaps23442;rank=4 chr7 . exon 789958 790259 . - . ID=Thaps23442.4;Parent=Thaps23442;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 790361 790967 . - 0 ID=Thaps23442;Parent=Thaps23442;rank=3 chr7 . exon 790361 790967 . - . ID=Thaps23442.3;Parent=Thaps23442;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 791051 791084 . - 0 ID=Thaps23442;Parent=Thaps23442;rank=2 chr7 . exon 791051 791084 . - . ID=Thaps23442.2;Parent=Thaps23442;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 791165 791424 . - 0 ID=Thaps23442;Parent=Thaps23442;rank=1 chr7 . exon 791165 791424 . - . ID=Thaps23442.1;Parent=Thaps23442;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 791580 792470 . + . ID=Thaps6905;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMT8];external_name=Thaps6905;logic_name=jgi_thaps3 chr7 ensembl transcript 791580 792470 . + . ID=Thaps6905;Parent=Thaps6905;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 791580 791787 . + 0 ID=Thaps6905;Parent=Thaps6905;rank=1 chr7 . exon 791580 791787 . + . ID=Thaps6905.1;Parent=Thaps6905;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 791924 792082 . + 0 ID=Thaps6905;Parent=Thaps6905;rank=2 chr7 . exon 791924 792082 . + . ID=Thaps6905.2;Parent=Thaps6905;constitutive=1;rank=2 chr7 . CDS 792172 792470 . + 0 ID=Thaps6905;Parent=Thaps6905;rank=3 chr7 . exon 792172 792470 . + . ID=Thaps6905.3;Parent=Thaps6905;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . repeat_region 798334 798358 . ? . description=trf chr7 . repeat_region 798334 798358 . ? . description=dust chr7 . repeat_region 799962 800081 . ? . description=dust chr7 . repeat_region 800024 800065 . ? . description=trf chr7 . repeat_region 800228 800270 . ? . description=trf chr7 . repeat_region 800757 800802 . ? . description=trf chr7 ensembl protein_coding_gene 806589 808019 . - . ID=Thaps23444;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMU3];external_name=Thaps23444;logic_name=jgi_thaps3 chr7 ensembl transcript 806589 808019 . - . ID=Thaps23444;Parent=Thaps23444;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 806589 808019 . - 0 ID=Thaps23444;Parent=Thaps23444;rank=1 chr7 . exon 806589 808019 . - . ID=Thaps23444.1;Parent=Thaps23444;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 800658 801104 . + . ID=Thaps35297;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMU0];external_name=Thaps35297;logic_name=jgi_thaps3 chr7 ensembl transcript 800658 801104 . + . ID=Thaps35297;Parent=Thaps35297;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 800658 800802 . + 0 ID=Thaps35297;Parent=Thaps35297;rank=1 chr7 . exon 800658 800802 . + . ID=Thaps35297.1;Parent=Thaps35297;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 800857 801104 . + 0 ID=Thaps35297;Parent=Thaps35297;rank=2 chr7 . exon 800857 801104 . + . ID=Thaps35297.2;Parent=Thaps35297;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 805301 806428 . + . ID=Thaps35310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMU2];external_name=Thaps35310;logic_name=jgi_thaps3 chr7 ensembl transcript 805301 806428 . + . ID=Thaps35310;Parent=Thaps35310;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 805301 806428 . + 0 ID=Thaps35310;Parent=Thaps35310;rank=1 chr7 . exon 805301 806428 . + . ID=Thaps35310.1;Parent=Thaps35310;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 801997 802884 . - . ID=Thaps35387;biotype=protein_coding;description=Cell division control protein%2C cdc2%2C cyclin-dependent kinase%2C cdk1%2C p34 [Source:UniProtKB/TrEMBL%3BAcc:B5YMU1];external_name=CDC2;logic_name=jgi_thaps3 chr7 ensembl transcript 801997 802884 . - . ID=Thaps35387;Parent=Thaps35387;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 801997 802884 . - 0 ID=Thaps35387;Parent=Thaps35387;rank=1 chr7 . exon 801997 802884 . - . ID=Thaps35387.1;Parent=Thaps35387;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 797531 798049 . - . ID=Thaps35510;biotype=protein_coding;description=SET-domain containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMT9];external_name=Thaps35510;logic_name=jgi_thaps3 chr7 ensembl transcript 797531 798049 . - . ID=Thaps35510;Parent=Thaps35510;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 797531 798049 . - 0 ID=Thaps35510;Parent=Thaps35510;rank=1 chr7 . exon 797531 798049 . - . ID=Thaps35510.1;Parent=Thaps35510;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 816787 817797 . - . ID=Thaps23446;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMU8];external_name=Thaps23446;logic_name=jgi_thaps3 chr7 ensembl transcript 816787 817797 . - . ID=Thaps23446;Parent=Thaps23446;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 816787 817797 . - 0 ID=Thaps23446;Parent=Thaps23446;rank=1 chr7 . exon 816787 817797 . - . ID=Thaps23446.1;Parent=Thaps23446;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 811286 811871 . + . ID=Thaps263147;biotype=protein_coding;description=Lipoate protein ligase B [Source:UniProtKB/TrEMBL%3BAcc:B5YMU5];external_name=LIPB_2;logic_name=jgi_thaps3 chr7 ensembl transcript 811286 811871 . + . ID=Thaps263147;Parent=Thaps263147;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 811286 811871 . + 0 ID=Thaps263147;Parent=Thaps263147;rank=1 chr7 . exon 811286 811871 . + . ID=Thaps263147.1;Parent=Thaps263147;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 813984 814562 . - . ID=Thaps41319;biotype=protein_coding;description=RL18%2C ribosomal protein 18%2C 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YMU6];external_name=RL18;logic_name=jgi_thaps3 chr7 ensembl transcript 813984 814562 . - . ID=Thaps41319;Parent=Thaps41319;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 813984 814562 . - 0 ID=Thaps41319;Parent=Thaps41319;rank=1 chr7 . exon 813984 814562 . - . ID=Thaps41319.1;Parent=Thaps41319;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 808230 809669 . + . ID=Thaps6911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMU4];external_name=Thaps6911;logic_name=jgi_thaps3 chr7 ensembl transcript 808230 809669 . + . ID=Thaps6911;Parent=Thaps6911;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 808230 809669 . + 0 ID=Thaps6911;Parent=Thaps6911;rank=1 chr7 . exon 808230 809669 . + . ID=Thaps6911.1;Parent=Thaps6911;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 815055 816458 . + . ID=Thaps6914;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMU7];external_name=Thaps6914;logic_name=jgi_thaps3 chr7 ensembl transcript 815055 816458 . + . ID=Thaps6914;Parent=Thaps6914;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 815055 816458 . + 0 ID=Thaps6914;Parent=Thaps6914;rank=1 chr7 . exon 815055 816458 . + . ID=Thaps6914.1;Parent=Thaps6914;constitutive=1;rank=1 chr7 . repeat_region 817408 817455 . ? . description=trf chr7 . repeat_region 821438 821459 . ? . description=trf chr7 . repeat_region 824928 824935 . ? . description=dust chr7 ensembl protein_coding_gene 821744 822880 . + . ID=Thaps23449;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMV1];external_name=Thaps23449;logic_name=jgi_thaps3 chr7 ensembl transcript 821744 822880 . + . ID=Thaps23449;Parent=Thaps23449;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 821744 822880 . + 0 ID=Thaps23449;Parent=Thaps23449;rank=1 chr7 . exon 821744 822880 . + . ID=Thaps23449.1;Parent=Thaps23449;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 823433 826651 . - . ID=Thaps23450;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMV2];external_name=Thaps23450;logic_name=jgi_thaps3 chr7 ensembl transcript 823433 826651 . - . ID=Thaps23450;Parent=Thaps23450;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 823433 826651 . - 0 ID=Thaps23450;Parent=Thaps23450;rank=1 chr7 . exon 823433 826651 . - . ID=Thaps23450.1;Parent=Thaps23450;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 820161 821423 . - . ID=Thaps269238;biotype=protein_coding;description=HSF35%2C heat shock transcription factor DNA-binding domain-containing protein%2C DNA binding%2C transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B5YMV0];external_name=HSF35;logic_name=jgi_thaps3 chr7 ensembl transcript 820161 821423 . - . ID=Thaps269238;Parent=Thaps269238;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 820161 821029 . - 0 ID=Thaps269238;Parent=Thaps269238;rank=2 chr7 . exon 820161 821029 . - . ID=Thaps269238.2;Parent=Thaps269238;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 821117 821423 . - 0 ID=Thaps269238;Parent=Thaps269238;rank=1 chr7 . exon 821117 821423 . - . ID=Thaps269238.1;Parent=Thaps269238;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 818458 819441 . + . ID=Thaps28920;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMU9];external_name=Thaps28920;logic_name=jgi_thaps3 chr7 ensembl transcript 818458 819441 . + . ID=Thaps28920;Parent=Thaps28920;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 818458 819441 . + 0 ID=Thaps28920;Parent=Thaps28920;rank=1 chr7 . exon 818458 819441 . + . ID=Thaps28920.1;Parent=Thaps28920;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 834659 835398 . - . ID=Thaps23452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMV4];external_name=Thaps23452;logic_name=jgi_thaps3 chr7 ensembl transcript 834659 835398 . - . ID=Thaps23452;Parent=Thaps23452;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 834659 834690 . - 0 ID=Thaps23452;Parent=Thaps23452;rank=2 chr7 . exon 834659 834690 . - . ID=Thaps23452.2;Parent=Thaps23452;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 834789 835398 . - 0 ID=Thaps23452;Parent=Thaps23452;rank=1 chr7 . exon 834789 835398 . - . ID=Thaps23452.1;Parent=Thaps23452;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 831377 833953 . - . ID=Thaps6922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMV3];external_name=Thaps6922;logic_name=jgi_thaps3 chr7 ensembl transcript 831377 833953 . - . ID=Thaps6922;Parent=Thaps6922;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 831377 833953 . - 0 ID=Thaps6922;Parent=Thaps6922;rank=1 chr7 . exon 831377 833953 . - . ID=Thaps6922.1;Parent=Thaps6922;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 836163 836569 . + . ID=Thaps6924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMV5];external_name=Thaps6924;logic_name=jgi_thaps3 chr7 ensembl transcript 836163 836569 . + . ID=Thaps6924;Parent=Thaps6924;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 836163 836385 . + 0 ID=Thaps6924;Parent=Thaps6924;rank=1 chr7 . exon 836163 836385 . + . ID=Thaps6924.1;Parent=Thaps6924;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 836475 836569 . + 0 ID=Thaps6924;Parent=Thaps6924;rank=2 chr7 . exon 836475 836569 . + . ID=Thaps6924.2;Parent=Thaps6924;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . repeat_region 840592 840609 . ? . description=dust chr7 . biological_region 844023 844024 0.999 + . logic_name=eponine chr7 ensembl protein_coding_gene 840692 842569 . + . ID=Thaps13647;biotype=protein_coding;description=Possible thymidylate synthase [Source:UniProtKB/TrEMBL%3BAcc:B5YMV7];external_name=TMS1;logic_name=jgi_thaps3 chr7 ensembl transcript 840692 842569 . + . ID=Thaps13647;Parent=Thaps13647;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 840692 840742 . + 0 ID=Thaps13647;Parent=Thaps13647;rank=1 chr7 . exon 840692 840742 . + . ID=Thaps13647.1;Parent=Thaps13647;constitutive=1;rank=1 chr7 . CDS 840929 841525 . + 0 ID=Thaps13647;Parent=Thaps13647;rank=2 chr7 . exon 840929 841525 . + . ID=Thaps13647.2;Parent=Thaps13647;constitutive=1;rank=2 chr7 . CDS 841589 841816 . + 0 ID=Thaps13647;Parent=Thaps13647;rank=3 chr7 . exon 841589 841816 . + . ID=Thaps13647.3;Parent=Thaps13647;constitutive=1;rank=3 chr7 . CDS 841898 842569 . + 0 ID=Thaps13647;Parent=Thaps13647;rank=4 chr7 . exon 841898 842569 . + . ID=Thaps13647.4;Parent=Thaps13647;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 846513 846733 . - . ID=Thaps263154;biotype=protein_coding;description=HSF34%2C heat shock transcription factor DNA-binding domain-containing protein%2C DNA binding%2C transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B5YMV9];external_name=HSF34;logic_name=jgi_thaps3 chr7 ensembl transcript 846513 846733 . - . ID=Thaps263154;Parent=Thaps263154;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 846513 846733 . - 0 ID=Thaps263154;Parent=Thaps263154;rank=1 chr7 . exon 846513 846733 . - . ID=Thaps263154.1;Parent=Thaps263154;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 843647 845815 . + . ID=Thaps269240;biotype=protein_coding;description=Chaperone%2C heat shock protein 70 [Source:UniProtKB/TrEMBL%3BAcc:B5YMV8];external_name=DNAK;logic_name=jgi_thaps3 chr7 ensembl transcript 843647 845815 . + . ID=Thaps269240;Parent=Thaps269240;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 843647 843814 . + 0 ID=Thaps269240;Parent=Thaps269240;rank=1 chr7 . exon 843647 843814 . + . ID=Thaps269240.1;Parent=Thaps269240;constitutive=1;rank=1 chr7 . CDS 843971 845815 . + 0 ID=Thaps269240;Parent=Thaps269240;rank=2 chr7 . exon 843971 845815 . + . ID=Thaps269240.2;Parent=Thaps269240;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 836894 839353 . + . ID=Thaps6925;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMV6];external_name=Thaps6925;logic_name=jgi_thaps3 chr7 ensembl transcript 836894 839353 . + . ID=Thaps6925;Parent=Thaps6925;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 836894 838322 . + 0 ID=Thaps6925;Parent=Thaps6925;rank=1 chr7 . exon 836894 838322 . + . ID=Thaps6925.1;Parent=Thaps6925;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 838398 839353 . + 0 ID=Thaps6925;Parent=Thaps6925;rank=2 chr7 . exon 838398 839353 . + . ID=Thaps6925.2;Parent=Thaps6925;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . repeat_region 852891 852955 . ? . description=trf chr7 . repeat_region 852950 852974 . ? . description=trf chr7 . repeat_region 853537 853969 . + . description=Harbinger2N_TP chr7 . repeat_region 853787 853862 . ? . description=trf chr7 . repeat_region 853809 853862 . ? . description=trf chr7 . repeat_region 853817 853897 . ? . description=trf chr7 . repeat_region 853825 853886 . ? . description=trf chr7 . repeat_region 853924 853971 . ? . description=trf chr7 . repeat_region 854106 854166 . ? . description=trf chr7 ensembl protein_coding_gene 850150 852501 . - . ID=Thaps6930;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMW0];external_name=Thaps6930;logic_name=jgi_thaps3 chr7 ensembl transcript 850150 852501 . - . ID=Thaps6930;Parent=Thaps6930;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 850150 852045 . - 0 ID=Thaps6930;Parent=Thaps6930;rank=2 chr7 . exon 850150 852045 . - . ID=Thaps6930.2;Parent=Thaps6930;constitutive=1;rank=2 chr7 . CDS 852253 852501 . - 0 ID=Thaps6930;Parent=Thaps6930;rank=1 chr7 . exon 852253 852501 . - . ID=Thaps6930.1;Parent=Thaps6930;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 854620 855675 . + . ID=Thaps6931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMW1];external_name=Thaps6931;logic_name=jgi_thaps3 chr7 ensembl transcript 854620 855675 . + . ID=Thaps6931;Parent=Thaps6931;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 854620 855675 . + 0 ID=Thaps6931;Parent=Thaps6931;rank=1 chr7 . exon 854620 855675 . + . ID=Thaps6931.1;Parent=Thaps6931;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 856502 856939 . + . ID=Thaps6932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMW2];external_name=Thaps6932;logic_name=jgi_thaps3 chr7 ensembl transcript 856502 856939 . + . ID=Thaps6932;Parent=Thaps6932;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 856502 856939 . + 0 ID=Thaps6932;Parent=Thaps6932;rank=1 chr7 . exon 856502 856939 . + . ID=Thaps6932.1;Parent=Thaps6932;constitutive=1;rank=1 chr7 . repeat_region 863895 863902 . ? . description=dust chr7 ensembl protein_coding_gene 857394 858017 . - . ID=Thaps17443;biotype=protein_coding;description=Myo-inositol monophosphatase [Source:UniProtKB/TrEMBL%3BAcc:B5YMW3];external_name=Thaps17443;logic_name=jgi_thaps3 chr7 ensembl transcript 857394 858017 . - . ID=Thaps17443;Parent=Thaps17443;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 857394 858017 . - 0 ID=Thaps17443;Parent=Thaps17443;rank=1 chr7 . exon 857394 858017 . - . ID=Thaps17443.1;Parent=Thaps17443;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 866623 866997 . - . ID=Thaps35407;biotype=protein_coding;description=Histone H2A [Source:UniProtKB/TrEMBL%3BAcc:B5YMW7];external_name=Thaps35407;logic_name=jgi_thaps3 chr7 ensembl transcript 866623 866997 . - . ID=Thaps35407;Parent=Thaps35407;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 866623 866997 . - 0 ID=Thaps35407;Parent=Thaps35407;rank=1 chr7 . exon 866623 866997 . - . ID=Thaps35407.1;Parent=Thaps35407;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 863169 865276 . - . ID=Thaps41328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMW6];external_name=Thaps41328;logic_name=jgi_thaps3 chr7 ensembl transcript 863169 865276 . - . ID=Thaps41328;Parent=Thaps41328;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 863169 863309 . - 0 ID=Thaps41328;Parent=Thaps41328;rank=7 chr7 . exon 863169 863309 . - . ID=Thaps41328.7;Parent=Thaps41328;constitutive=1;rank=7 chr7 . CDS 863400 863674 . - 0 ID=Thaps41328;Parent=Thaps41328;rank=6 chr7 . exon 863400 863674 . - . ID=Thaps41328.6;Parent=Thaps41328;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . CDS 863759 863842 . - 0 ID=Thaps41328;Parent=Thaps41328;rank=5 chr7 . exon 863759 863842 . - . ID=Thaps41328.5;Parent=Thaps41328;constitutive=1;rank=5 chr7 . CDS 863922 863997 . - 0 ID=Thaps41328;Parent=Thaps41328;rank=4 chr7 . exon 863922 863997 . - . ID=Thaps41328.4;Parent=Thaps41328;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 864080 864231 . - 0 ID=Thaps41328;Parent=Thaps41328;rank=3 chr7 . exon 864080 864231 . - . ID=Thaps41328.3;Parent=Thaps41328;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 864310 864516 . - 0 ID=Thaps41328;Parent=Thaps41328;rank=2 chr7 . exon 864310 864516 . - . ID=Thaps41328.2;Parent=Thaps41328;constitutive=1;rank=2 chr7 . CDS 864640 865276 . - 0 ID=Thaps41328;Parent=Thaps41328;rank=1 chr7 . exon 864640 865276 . - . ID=Thaps41328.1;Parent=Thaps41328;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 858692 859913 . + . ID=Thaps6934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMW4];external_name=Thaps6934;logic_name=jgi_thaps3 chr7 ensembl transcript 858692 859913 . + . ID=Thaps6934;Parent=Thaps6934;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 858692 858840 . + 0 ID=Thaps6934;Parent=Thaps6934;rank=1 chr7 . exon 858692 858840 . + . ID=Thaps6934.1;Parent=Thaps6934;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 858920 859913 . + 0 ID=Thaps6934;Parent=Thaps6934;rank=2 chr7 . exon 858920 859913 . + . ID=Thaps6934.2;Parent=Thaps6934;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 860030 861635 . - . ID=Thaps6935;biotype=protein_coding;description=HSF32%2C heat shock transcription factor DNA-binding domain-containing protein%2C DNA binding%2C transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B5YMW5];external_name=HSF32;logic_name=jgi_thaps3 chr7 ensembl transcript 860030 861635 . - . ID=Thaps6935;Parent=Thaps6935;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 860030 860868 . - 0 ID=Thaps6935;Parent=Thaps6935;rank=2 chr7 . exon 860030 860868 . - . ID=Thaps6935.2;Parent=Thaps6935;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 860960 861635 . - 0 ID=Thaps6935;Parent=Thaps6935;rank=1 chr7 . exon 860960 861635 . - . ID=Thaps6935.1;Parent=Thaps6935;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 869578 869889 . + . ID=Thaps35229;biotype=protein_coding;description=Histone H4 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD7];external_name=H4_2;logic_name=jgi_thaps3 chr7 ensembl transcript 869578 869889 . + . ID=Thaps35229;Parent=Thaps35229;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 869578 869889 . + 0 ID=Thaps35229;Parent=Thaps35229;rank=1 chr7 . exon 869578 869889 . + . ID=Thaps35229.1;Parent=Thaps35229;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 870315 871853 . - . ID=Thaps35401;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMX1];external_name=Thaps35401;logic_name=jgi_thaps3 chr7 ensembl transcript 870315 871853 . - . ID=Thaps35401;Parent=Thaps35401;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 870315 870656 . - 0 ID=Thaps35401;Parent=Thaps35401;rank=4 chr7 . exon 870315 870656 . - . ID=Thaps35401.4;Parent=Thaps35401;constitutive=1;rank=4 chr7 . CDS 870720 870828 . - 0 ID=Thaps35401;Parent=Thaps35401;rank=3 chr7 . exon 870720 870828 . - . ID=Thaps35401.3;Parent=Thaps35401;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 871012 871326 . - 0 ID=Thaps35401;Parent=Thaps35401;rank=2 chr7 . exon 871012 871326 . - . ID=Thaps35401.2;Parent=Thaps35401;constitutive=1;rank=2 chr7 . CDS 871390 871853 . - 0 ID=Thaps35401;Parent=Thaps35401;rank=1 chr7 . exon 871390 871853 . - . ID=Thaps35401.1;Parent=Thaps35401;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 867334 867696 . + . ID=Thaps35611;biotype=protein_coding;description=Histone H2B [Source:UniProtKB/TrEMBL%3BAcc:B5YMW8];external_name=Thaps35611;logic_name=jgi_thaps3 chr7 ensembl transcript 867334 867696 . + . ID=Thaps35611;Parent=Thaps35611;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 867334 867696 . + 0 ID=Thaps35611;Parent=Thaps35611;rank=1 chr7 . exon 867334 867696 . + . ID=Thaps35611.1;Parent=Thaps35611;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 875437 877272 . - . ID=Thaps35684;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMX3];external_name=Thaps35684;logic_name=jgi_thaps3 chr7 ensembl transcript 875437 877272 . - . ID=Thaps35684;Parent=Thaps35684;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 875437 877272 . - 0 ID=Thaps35684;Parent=Thaps35684;rank=1 chr7 . exon 875437 877272 . - . ID=Thaps35684.1;Parent=Thaps35684;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 868727 869235 . - . ID=Thaps586;biotype=protein_coding;description=Histone H3 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD6];external_name=H3-2;logic_name=jgi_thaps3 chr7 ensembl transcript 868727 869235 . - . ID=Thaps586;Parent=Thaps586;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 868727 869024 . - 0 ID=Thaps586;Parent=Thaps586;rank=2 chr7 . exon 868727 869024 . - . ID=Thaps586.2;Parent=Thaps586;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 869123 869235 . - 0 ID=Thaps586;Parent=Thaps586;rank=1 chr7 . exon 869123 869235 . - . ID=Thaps586.1;Parent=Thaps586;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 872402 875355 . + . ID=Thaps6942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMX2];external_name=Thaps6942;logic_name=jgi_thaps3 chr7 ensembl transcript 872402 875355 . + . ID=Thaps6942;Parent=Thaps6942;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 872402 872813 . + 0 ID=Thaps6942;Parent=Thaps6942;rank=1 chr7 . exon 872402 872813 . + . ID=Thaps6942.1;Parent=Thaps6942;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 872896 873305 . + 0 ID=Thaps6942;Parent=Thaps6942;rank=2 chr7 . exon 872896 873305 . + . ID=Thaps6942.2;Parent=Thaps6942;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 873493 873549 . + 0 ID=Thaps6942;Parent=Thaps6942;rank=3 chr7 . exon 873493 873549 . + . ID=Thaps6942.3;Parent=Thaps6942;constitutive=1;rank=3 chr7 . CDS 873799 874930 . + 0 ID=Thaps6942;Parent=Thaps6942;rank=4 chr7 . exon 873799 874930 . + . ID=Thaps6942.4;Parent=Thaps6942;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 875006 875355 . + 0 ID=Thaps6942;Parent=Thaps6942;rank=5 chr7 . exon 875006 875355 . + . ID=Thaps6942.5;Parent=Thaps6942;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . repeat_region 877316 877324 . ? . description=dust chr7 . repeat_region 883522 883530 . ? . description=dust chr7 ensembl protein_coding_gene 879528 879839 . - . ID=Thaps35279;biotype=protein_coding;description=Histone H4 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD7];external_name=H4_2;logic_name=jgi_thaps3 chr7 ensembl transcript 879528 879839 . - . ID=Thaps35279;Parent=Thaps35279;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 879528 879839 . - 0 ID=Thaps35279;Parent=Thaps35279;rank=1 chr7 . exon 879528 879839 . - . ID=Thaps35279.1;Parent=Thaps35279;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 880182 880690 . + . ID=Thaps35404;biotype=protein_coding;description=Histone H3 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD6];external_name=H3-2;logic_name=jgi_thaps3 chr7 ensembl transcript 880182 880690 . + . ID=Thaps35404;Parent=Thaps35404;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 880182 880294 . + 0 ID=Thaps35404;Parent=Thaps35404;rank=1 chr7 . exon 880182 880294 . + . ID=Thaps35404.1;Parent=Thaps35404;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 880393 880690 . + 0 ID=Thaps35404;Parent=Thaps35404;rank=2 chr7 . exon 880393 880690 . + . ID=Thaps35404.2;Parent=Thaps35404;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 877480 879109 . + . ID=Thaps6944;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMX4];external_name=Thaps6944;logic_name=jgi_thaps3 chr7 ensembl transcript 877480 879109 . + . ID=Thaps6944;Parent=Thaps6944;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 877480 877746 . + 0 ID=Thaps6944;Parent=Thaps6944;rank=1 chr7 . exon 877480 877746 . + . ID=Thaps6944.1;Parent=Thaps6944;constitutive=1;rank=1 chr7 . CDS 877825 878419 . + 0 ID=Thaps6944;Parent=Thaps6944;rank=2 chr7 . exon 877825 878419 . + . ID=Thaps6944.2;Parent=Thaps6944;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 878727 879109 . + 0 ID=Thaps6944;Parent=Thaps6944;rank=3 chr7 . exon 878727 879109 . + . ID=Thaps6944.3;Parent=Thaps6944;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 881715 882077 . - . ID=Thaps6947;biotype=protein_coding;description=Histone H2B [Source:UniProtKB/TrEMBL%3BAcc:B5YMW8];external_name=Thaps6947;logic_name=jgi_thaps3 chr7 ensembl transcript 881715 882077 . - . ID=Thaps6947;Parent=Thaps6947;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 881715 882077 . - 0 ID=Thaps6947;Parent=Thaps6947;rank=1 chr7 . exon 881715 882077 . - . ID=Thaps6947.1;Parent=Thaps6947;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 882415 882789 . + . ID=Thaps6948;biotype=protein_coding;description=Histone H2A [Source:UniProtKB/TrEMBL%3BAcc:B5YMW7];external_name=Thaps6948;logic_name=jgi_thaps3 chr7 ensembl transcript 882415 882789 . + . ID=Thaps6948;Parent=Thaps6948;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 882415 882789 . + 0 ID=Thaps6948;Parent=Thaps6948;rank=1 chr7 . exon 882415 882789 . + . ID=Thaps6948.1;Parent=Thaps6948;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 883178 886527 . + . ID=Thaps6949;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMX9];external_name=Thaps6949;logic_name=jgi_thaps3 chr7 ensembl transcript 883178 886527 . + . ID=Thaps6949;Parent=Thaps6949;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 883178 883432 . + 0 ID=Thaps6949;Parent=Thaps6949;rank=1 chr7 . exon 883178 883432 . + . ID=Thaps6949.1;Parent=Thaps6949;constitutive=1;rank=1 chr7 . CDS 883506 884553 . + 0 ID=Thaps6949;Parent=Thaps6949;rank=2 chr7 . exon 883506 884553 . + . ID=Thaps6949.2;Parent=Thaps6949;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 884647 884877 . + 0 ID=Thaps6949;Parent=Thaps6949;rank=3 chr7 . exon 884647 884877 . + . ID=Thaps6949.3;Parent=Thaps6949;constitutive=1;rank=3 chr7 . CDS 884964 885160 . + 0 ID=Thaps6949;Parent=Thaps6949;rank=4 chr7 . exon 884964 885160 . + . ID=Thaps6949.4;Parent=Thaps6949;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 885247 885316 . + 0 ID=Thaps6949;Parent=Thaps6949;rank=5 chr7 . exon 885247 885316 . + . ID=Thaps6949.5;Parent=Thaps6949;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 885370 885837 . + 0 ID=Thaps6949;Parent=Thaps6949;rank=6 chr7 . exon 885370 885837 . + . ID=Thaps6949.6;Parent=Thaps6949;constitutive=1;rank=6 chr7 . CDS 885920 886527 . + 0 ID=Thaps6949;Parent=Thaps6949;rank=7 chr7 . exon 885920 886527 . + . ID=Thaps6949.7;Parent=Thaps6949;constitutive=1;ensembl_end_phase=2;rank=7 chr7 . repeat_region 891398 891430 . ? . description=trf chr7 ensembl protein_coding_gene 891525 895112 . + . ID=Thaps23457;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMY1];external_name=Thaps23457;logic_name=jgi_thaps3 chr7 ensembl transcript 891525 895112 . + . ID=Thaps23457;Parent=Thaps23457;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 891525 894481 . + 0 ID=Thaps23457;Parent=Thaps23457;rank=1 chr7 . exon 891525 894481 . + . ID=Thaps23457.1;Parent=Thaps23457;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 894578 895112 . + 0 ID=Thaps23457;Parent=Thaps23457;rank=2 chr7 . exon 894578 895112 . + . ID=Thaps23457.2;Parent=Thaps23457;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 887046 889269 . - . ID=Thaps6950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMY0];external_name=Thaps6950;logic_name=jgi_thaps3 chr7 ensembl transcript 887046 889269 . - . ID=Thaps6950;Parent=Thaps6950;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 887046 888101 . - 0 ID=Thaps6950;Parent=Thaps6950;rank=3 chr7 . exon 887046 888101 . - . ID=Thaps6950.3;Parent=Thaps6950;constitutive=1;rank=3 chr7 . CDS 888190 888581 . - 0 ID=Thaps6950;Parent=Thaps6950;rank=2 chr7 . exon 888190 888581 . - . ID=Thaps6950.2;Parent=Thaps6950;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 888717 889269 . - 0 ID=Thaps6950;Parent=Thaps6950;rank=1 chr7 . exon 888717 889269 . - . ID=Thaps6950.1;Parent=Thaps6950;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 895528 895974 . + . ID=Thaps6952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMY2];external_name=Thaps6952;logic_name=jgi_thaps3 chr7 ensembl transcript 895528 895974 . + . ID=Thaps6952;Parent=Thaps6952;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 895528 895974 . + 0 ID=Thaps6952;Parent=Thaps6952;rank=1 chr7 . exon 895528 895974 . + . ID=Thaps6952.1;Parent=Thaps6952;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 896159 897058 . - . ID=Thaps6953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMY3];external_name=Thaps6953;logic_name=jgi_thaps3 chr7 ensembl transcript 896159 897058 . - . ID=Thaps6953;Parent=Thaps6953;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 896159 897058 . - 0 ID=Thaps6953;Parent=Thaps6953;rank=1 chr7 . exon 896159 897058 . - . ID=Thaps6953.1;Parent=Thaps6953;constitutive=1;rank=1 chr7 . repeat_region 902093 902100 . ? . description=dust chr7 ensembl protein_coding_gene 900259 901205 . + . ID=Thaps263178;biotype=protein_coding;description=3-hydroxyacyl-CoA dehydrogenase type II [Source:UniProtKB/TrEMBL%3BAcc:B5YMY5];external_name=HCD1;logic_name=jgi_thaps3 chr7 ensembl transcript 900259 901205 . + . ID=Thaps263178;Parent=Thaps263178;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 900259 900342 . + 0 ID=Thaps263178;Parent=Thaps263178;rank=1 chr7 . exon 900259 900342 . + . ID=Thaps263178.1;Parent=Thaps263178;constitutive=1;rank=1 chr7 . CDS 900376 900505 . + 0 ID=Thaps263178;Parent=Thaps263178;rank=2 chr7 . exon 900376 900505 . + . ID=Thaps263178.2;Parent=Thaps263178;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 900586 900941 . + 0 ID=Thaps263178;Parent=Thaps263178;rank=3 chr7 . exon 900586 900941 . + . ID=Thaps263178.3;Parent=Thaps263178;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 901008 901205 . + 0 ID=Thaps263178;Parent=Thaps263178;rank=4 chr7 . exon 901008 901205 . + . ID=Thaps263178.4;Parent=Thaps263178;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 898219 899734 . - . ID=Thaps35323;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMY4];external_name=Thaps35323;logic_name=jgi_thaps3 chr7 ensembl transcript 898219 899734 . - . ID=Thaps35323;Parent=Thaps35323;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 898219 898541 . - 0 ID=Thaps35323;Parent=Thaps35323;rank=4 chr7 . exon 898219 898541 . - . ID=Thaps35323.4;Parent=Thaps35323;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 898665 899030 . - 0 ID=Thaps35323;Parent=Thaps35323;rank=3 chr7 . exon 898665 899030 . - . ID=Thaps35323.3;Parent=Thaps35323;constitutive=1;rank=3 chr7 . CDS 899244 899510 . - 0 ID=Thaps35323;Parent=Thaps35323;rank=2 chr7 . exon 899244 899510 . - . ID=Thaps35323.2;Parent=Thaps35323;constitutive=1;rank=2 chr7 . CDS 899623 899734 . - 0 ID=Thaps35323;Parent=Thaps35323;rank=1 chr7 . exon 899623 899734 . - . ID=Thaps35323.1;Parent=Thaps35323;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 902456 906064 . - . ID=Thaps6956;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMY6];external_name=Thaps6956;logic_name=jgi_thaps3 chr7 ensembl transcript 902456 906064 . - . ID=Thaps6956;Parent=Thaps6956;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 902456 905937 . - 0 ID=Thaps6956;Parent=Thaps6956;rank=2 chr7 . exon 902456 905937 . - . ID=Thaps6956.2;Parent=Thaps6956;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 906007 906064 . - 0 ID=Thaps6956;Parent=Thaps6956;rank=1 chr7 . exon 906007 906064 . - . ID=Thaps6956.1;Parent=Thaps6956;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 906262 907965 . + . ID=Thaps6957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMY7];external_name=Thaps6957;logic_name=jgi_thaps3 chr7 ensembl transcript 906262 907965 . + . ID=Thaps6957;Parent=Thaps6957;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 906262 907965 . + 0 ID=Thaps6957;Parent=Thaps6957;rank=1 chr7 . exon 906262 907965 . + . ID=Thaps6957.1;Parent=Thaps6957;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 909882 911133 . + . ID=Thaps41333;biotype=protein_coding;description=WD-40 repeat containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMY9];external_name=Thaps41333;logic_name=jgi_thaps3 chr7 ensembl transcript 909882 911133 . + . ID=Thaps41333;Parent=Thaps41333;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 909882 910122 . + 0 ID=Thaps41333;Parent=Thaps41333;rank=1 chr7 . exon 909882 910122 . + . ID=Thaps41333.1;Parent=Thaps41333;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 910283 911133 . + 0 ID=Thaps41333;Parent=Thaps41333;rank=2 chr7 . exon 910283 911133 . + . ID=Thaps41333.2;Parent=Thaps41333;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 908326 909297 . - . ID=Thaps6958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMY8];external_name=Thaps6958;logic_name=jgi_thaps3 chr7 ensembl transcript 908326 909297 . - . ID=Thaps6958;Parent=Thaps6958;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 908326 908864 . - 0 ID=Thaps6958;Parent=Thaps6958;rank=2 chr7 . exon 908326 908864 . - . ID=Thaps6958.2;Parent=Thaps6958;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 908982 909297 . - 0 ID=Thaps6958;Parent=Thaps6958;rank=1 chr7 . exon 908982 909297 . - . ID=Thaps6958.1;Parent=Thaps6958;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 911269 911826 . - . ID=Thaps6960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ0];external_name=Thaps6960;logic_name=jgi_thaps3 chr7 ensembl transcript 911269 911826 . - . ID=Thaps6960;Parent=Thaps6960;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 911269 911826 . - 0 ID=Thaps6960;Parent=Thaps6960;rank=1 chr7 . exon 911269 911826 . - . ID=Thaps6960.1;Parent=Thaps6960;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 912267 915488 . + . ID=Thaps6961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ1];external_name=Thaps6961;logic_name=jgi_thaps3 chr7 ensembl transcript 912267 915488 . + . ID=Thaps6961;Parent=Thaps6961;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 912267 915488 . + 0 ID=Thaps6961;Parent=Thaps6961;rank=1 chr7 . exon 912267 915488 . + . ID=Thaps6961.1;Parent=Thaps6961;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 915928 918090 . - . ID=Thaps6962;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ2];external_name=Thaps6962;logic_name=jgi_thaps3 chr7 ensembl transcript 915928 918090 . - . ID=Thaps6962;Parent=Thaps6962;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 915928 918090 . - 0 ID=Thaps6962;Parent=Thaps6962;rank=1 chr7 . exon 915928 918090 . - . ID=Thaps6962.1;Parent=Thaps6962;constitutive=1;rank=1 chr7 . repeat_region 922696 922759 . ? . description=dust chr7 ensembl protein_coding_gene 922911 926163 . + . ID=Thaps23461;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ5];external_name=Thaps23461;logic_name=jgi_thaps3 chr7 ensembl transcript 922911 926163 . + . ID=Thaps23461;Parent=Thaps23461;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 922911 923791 . + 0 ID=Thaps23461;Parent=Thaps23461;rank=1 chr7 . exon 922911 923791 . + . ID=Thaps23461.1;Parent=Thaps23461;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 923862 926163 . + 0 ID=Thaps23461;Parent=Thaps23461;rank=2 chr7 . exon 923862 926163 . + . ID=Thaps23461.2;Parent=Thaps23461;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 926250 928587 . - . ID=Thaps23462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ6];external_name=Thaps23462;logic_name=jgi_thaps3 chr7 ensembl transcript 926250 928587 . - . ID=Thaps23462;Parent=Thaps23462;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 926250 927480 . - 0 ID=Thaps23462;Parent=Thaps23462;rank=2 chr7 . exon 926250 927480 . - . ID=Thaps23462.2;Parent=Thaps23462;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 927611 928587 . - 0 ID=Thaps23462;Parent=Thaps23462;rank=1 chr7 ensembl gene 921110 922335 . - . ID=Thaps263180;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 921110 922335 . - . ID=Thaps263180;Parent=Thaps263180;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 921110 922040 . - . ID=Thaps263180.2;Parent=Thaps263180;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 922068 922335 . - . ID=Thaps263180.1;Parent=Thaps263180;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 918379 919494 . + . ID=Thaps6963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ3];external_name=Thaps6963;logic_name=jgi_thaps3 chr7 ensembl transcript 918379 919494 . + . ID=Thaps6963;Parent=Thaps6963;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 918379 919494 . + 0 ID=Thaps6963;Parent=Thaps6963;rank=1 chr7 . exon 918379 919494 . + . ID=Thaps6963.1;Parent=Thaps6963;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 919836 920738 . - . ID=Thaps6964;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ4];external_name=Thaps6964;logic_name=jgi_thaps3 chr7 ensembl transcript 919836 920738 . - . ID=Thaps6964;Parent=Thaps6964;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 919836 920738 . - 0 ID=Thaps6964;Parent=Thaps6964;rank=1 chr7 . exon 919836 920738 . - . ID=Thaps6964.1;Parent=Thaps6964;constitutive=1;rank=1 chr7 . repeat_region 926766 926852 . ? . description=trf chr7 . repeat_region 926818 926859 . ? . description=trf chr7 . biological_region 928390 928391 0.999 + . logic_name=eponine chr7 ensembl protein_coding_gene 929162 930172 . + . ID=Thaps15424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ7];external_name=Thaps15424;logic_name=jgi_thaps3 chr7 ensembl transcript 929162 930172 . + . ID=Thaps15424;Parent=Thaps15424;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 929162 929260 . + 0 ID=Thaps15424;Parent=Thaps15424;rank=1 chr7 . exon 929162 929260 . + . ID=Thaps15424.1;Parent=Thaps15424;constitutive=1;rank=1 chr7 . CDS 929348 929974 . + 0 ID=Thaps15424;Parent=Thaps15424;rank=2 chr7 . exon 929348 929974 . + . ID=Thaps15424.2;Parent=Thaps15424;constitutive=1;rank=2 chr7 . CDS 930074 930172 . + 0 ID=Thaps15424;Parent=Thaps15424;rank=3 chr7 . exon 930074 930172 . + . ID=Thaps15424.3;Parent=Thaps15424;constitutive=1;rank=3 chr7 . exon 927611 928587 . - . ID=Thaps23462.1;Parent=Thaps23462;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 934111 935559 . - . ID=Thaps23464;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ8];external_name=Thaps23464;logic_name=jgi_thaps3 chr7 ensembl transcript 934111 935559 . - . ID=Thaps23464;Parent=Thaps23464;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 934111 935559 . - 0 ID=Thaps23464;Parent=Thaps23464;rank=1 chr7 . exon 934111 935559 . - . ID=Thaps23464.1;Parent=Thaps23464;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 935977 936377 . + . ID=Thaps263181;biotype=protein_coding;description=Chloroplast protein Cpn21 in A-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YMZ9];external_name=Thaps263181;logic_name=jgi_thaps3 chr7 ensembl transcript 935977 936377 . + . ID=Thaps263181;Parent=Thaps263181;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 935977 936060 . + 0 ID=Thaps263181;Parent=Thaps263181;rank=1 chr7 . exon 935977 936060 . + . ID=Thaps263181.1;Parent=Thaps263181;constitutive=1;rank=1 chr7 . CDS 936192 936377 . + 0 ID=Thaps263181;Parent=Thaps263181;rank=2 chr7 . exon 936192 936377 . + . ID=Thaps263181.2;Parent=Thaps263181;constitutive=1;rank=2 chr7 . repeat_region 945276 945324 . ? . description=dust chr7 . repeat_region 945367 945397 . + . description=TE2c_TP chr7 . repeat_region 946213 946449 . + . description=TE2c_TP chr7 ensembl protein_coding_gene 938387 939856 . - . ID=Thaps23466;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN01];external_name=Thaps23466;logic_name=jgi_thaps3 chr7 ensembl transcript 938387 939856 . - . ID=Thaps23466;Parent=Thaps23466;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 938387 939856 . - 0 ID=Thaps23466;Parent=Thaps23466;rank=1 chr7 . exon 938387 939856 . - . ID=Thaps23466.1;Parent=Thaps23466;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 940262 943672 . + . ID=Thaps23467;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN02];external_name=Thaps23467;logic_name=jgi_thaps3 chr7 ensembl transcript 940262 943672 . + . ID=Thaps23467;Parent=Thaps23467;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 940262 940696 . + 0 ID=Thaps23467;Parent=Thaps23467;rank=1 chr7 . exon 940262 940696 . + . ID=Thaps23467.1;Parent=Thaps23467;constitutive=1;rank=1 chr7 . CDS 940844 943672 . + 0 ID=Thaps23467;Parent=Thaps23467;rank=2 chr7 . exon 940844 943672 . + . ID=Thaps23467.2;Parent=Thaps23467;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 946268 947201 . - . ID=Thaps263182;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN04];external_name=Thaps263182;logic_name=jgi_thaps3 chr7 ensembl transcript 946268 947201 . - . ID=Thaps263182;Parent=Thaps263182;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 946268 947201 . - 0 ID=Thaps263182;Parent=Thaps263182;rank=1 chr7 . exon 946268 947201 . - . ID=Thaps263182.1;Parent=Thaps263182;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 937190 937990 . - . ID=Thaps6971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN00];external_name=Thaps6971;logic_name=jgi_thaps3 chr7 ensembl transcript 937190 937990 . - . ID=Thaps6971;Parent=Thaps6971;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 937190 937990 . - 0 ID=Thaps6971;Parent=Thaps6971;rank=1 chr7 . exon 937190 937990 . - . ID=Thaps6971.1;Parent=Thaps6971;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 945487 946068 . + . ID=Thaps6974;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN03];external_name=Thaps6974;logic_name=jgi_thaps3 chr7 ensembl transcript 945487 946068 . + . ID=Thaps6974;Parent=Thaps6974;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 945487 946068 . + 0 ID=Thaps6974;Parent=Thaps6974;rank=1 chr7 . exon 945487 946068 . + . ID=Thaps6974.1;Parent=Thaps6974;constitutive=1;rank=1 chr7 . repeat_region 947597 947618 . ? . description=trf chr7 . repeat_region 951994 952035 . ? . description=trf chr7 . repeat_region 952003 952044 . ? . description=trf chr7 . repeat_region 952366 952385 . ? . description=trf chr7 . repeat_region 952498 952523 . ? . description=trf chr7 . repeat_region 953476 953501 . ? . description=trf chr7 . repeat_region 954984 955026 . ? . description=trf chr7 ensembl protein_coding_gene 949543 953107 . - . ID=Thaps23469;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN06];external_name=Thaps23469;logic_name=jgi_thaps3 chr7 ensembl transcript 949543 953107 . - . ID=Thaps23469;Parent=Thaps23469;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 949543 950562 . - 0 ID=Thaps23469;Parent=Thaps23469;rank=6 chr7 . exon 949543 950562 . - . ID=Thaps23469.6;Parent=Thaps23469;constitutive=1;rank=6 chr7 . CDS 950656 951105 . - 0 ID=Thaps23469;Parent=Thaps23469;rank=5 chr7 . exon 950656 951105 . - . ID=Thaps23469.5;Parent=Thaps23469;constitutive=1;rank=5 chr7 . CDS 951187 951493 . - 0 ID=Thaps23469;Parent=Thaps23469;rank=4 chr7 . exon 951187 951493 . - . ID=Thaps23469.4;Parent=Thaps23469;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 951568 952161 . - 0 ID=Thaps23469;Parent=Thaps23469;rank=3 chr7 . exon 951568 952161 . - . ID=Thaps23469.3;Parent=Thaps23469;constitutive=1;rank=3 chr7 . CDS 952246 952545 . - 0 ID=Thaps23469;Parent=Thaps23469;rank=2 chr7 . exon 952246 952545 . - . ID=Thaps23469.2;Parent=Thaps23469;constitutive=1;rank=2 chr7 . CDS 952911 953107 . - 0 ID=Thaps23469;Parent=Thaps23469;rank=1 chr7 . exon 952911 953107 . - . ID=Thaps23469.1;Parent=Thaps23469;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 954080 954637 . + . ID=Thaps263184;biotype=protein_coding;description=Protein glycoside hydrolase%2C family 19 domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN07];external_name=Thaps263184;logic_name=jgi_thaps3 chr7 ensembl transcript 954080 954637 . + . ID=Thaps263184;Parent=Thaps263184;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 954080 954175 . + 0 ID=Thaps263184;Parent=Thaps263184;rank=1 chr7 . exon 954080 954175 . + . ID=Thaps263184.1;Parent=Thaps263184;constitutive=1;rank=1 chr7 . CDS 954242 954317 . + 0 ID=Thaps263184;Parent=Thaps263184;rank=2 chr7 . exon 954242 954317 . + . ID=Thaps263184.2;Parent=Thaps263184;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 954378 954637 . + 0 ID=Thaps263184;Parent=Thaps263184;rank=3 chr7 . exon 954378 954637 . + . ID=Thaps263184.3;Parent=Thaps263184;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 948643 949482 . + . ID=Thaps35637;biotype=protein_coding;description=Hypothetical 3'%2C5'-cyclic AMP phosphodiesterase [Source:UniProtKB/TrEMBL%3BAcc:B5YN05];external_name=Thaps35637;logic_name=jgi_thaps3 chr7 ensembl transcript 948643 949482 . + . ID=Thaps35637;Parent=Thaps35637;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 948643 949482 . + 0 ID=Thaps35637;Parent=Thaps35637;rank=1 chr7 . exon 948643 949482 . + . ID=Thaps35637.1;Parent=Thaps35637;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 959980 960537 . + . ID=Thaps35410;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN10];external_name=Thaps35410;logic_name=jgi_thaps3 chr7 ensembl transcript 959980 960537 . + . ID=Thaps35410;Parent=Thaps35410;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 959980 960537 . + 0 ID=Thaps35410;Parent=Thaps35410;rank=1 chr7 . exon 959980 960537 . + . ID=Thaps35410.1;Parent=Thaps35410;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 956852 957739 . - . ID=Thaps6979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN08];external_name=Thaps6979;logic_name=jgi_thaps3 chr7 ensembl transcript 956852 957739 . - . ID=Thaps6979;Parent=Thaps6979;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 956852 957322 . - 0 ID=Thaps6979;Parent=Thaps6979;rank=3 chr7 . exon 956852 957322 . - . ID=Thaps6979.3;Parent=Thaps6979;constitutive=1;rank=3 chr7 . CDS 957429 957599 . - 0 ID=Thaps6979;Parent=Thaps6979;rank=2 chr7 . exon 957429 957599 . - . ID=Thaps6979.2;Parent=Thaps6979;constitutive=1;rank=2 chr7 . CDS 957638 957739 . - 0 ID=Thaps6979;Parent=Thaps6979;rank=1 chr7 . exon 957638 957739 . - . ID=Thaps6979.1;Parent=Thaps6979;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 958150 959397 . + . ID=Thaps6980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN09];external_name=Thaps6980;logic_name=jgi_thaps3 chr7 ensembl transcript 958150 959397 . + . ID=Thaps6980;Parent=Thaps6980;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 958150 959397 . + 0 ID=Thaps6980;Parent=Thaps6980;rank=1 chr7 . exon 958150 959397 . + . ID=Thaps6980.1;Parent=Thaps6980;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 963445 965115 . - . ID=Thaps6982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN11];external_name=Thaps6982;logic_name=jgi_thaps3 chr7 ensembl transcript 963445 965115 . - . ID=Thaps6982;Parent=Thaps6982;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 963445 963596 . - 0 ID=Thaps6982;Parent=Thaps6982;rank=2 chr7 . exon 963445 963596 . - . ID=Thaps6982.2;Parent=Thaps6982;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 963669 965115 . - 0 ID=Thaps6982;Parent=Thaps6982;rank=1 chr7 . exon 963669 965115 . - . ID=Thaps6982.1;Parent=Thaps6982;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 965379 965921 . + . ID=Thaps6983;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN12];external_name=Thaps6983;logic_name=jgi_thaps3 chr7 ensembl transcript 965379 965921 . + . ID=Thaps6983;Parent=Thaps6983;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 965379 965921 . + 0 ID=Thaps6983;Parent=Thaps6983;rank=1 chr7 . exon 965379 965921 . + . ID=Thaps6983.1;Parent=Thaps6983;constitutive=1;rank=1 chr7 . repeat_region 973448 973460 . ? . description=dust chr7 ensembl protein_coding_gene 972241 972960 . - . ID=Thaps23471;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN15];external_name=Thaps23471;logic_name=jgi_thaps3 chr7 ensembl transcript 972241 972960 . - . ID=Thaps23471;Parent=Thaps23471;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 972241 972960 . - 0 ID=Thaps23471;Parent=Thaps23471;rank=1 chr7 . exon 972241 972960 . - . ID=Thaps23471.1;Parent=Thaps23471;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 973665 974684 . + . ID=Thaps23472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN16];external_name=Thaps23472;logic_name=jgi_thaps3 chr7 ensembl transcript 973665 974684 . + . ID=Thaps23472;Parent=Thaps23472;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 973665 974684 . + 0 ID=Thaps23472;Parent=Thaps23472;rank=1 chr7 . exon 973665 974684 . + . ID=Thaps23472.1;Parent=Thaps23472;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 971586 972044 . + . ID=Thaps35248;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN14];external_name=Thaps35248;logic_name=jgi_thaps3 chr7 ensembl transcript 971586 972044 . + . ID=Thaps35248;Parent=Thaps35248;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 971586 972044 . + 0 ID=Thaps35248;Parent=Thaps35248;rank=1 chr7 . exon 971586 972044 . + . ID=Thaps35248.1;Parent=Thaps35248;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 976261 977898 . + . ID=Thaps35402;biotype=protein_coding;description=Alanine aminotransferase%2C aminotransferase class I [Source:UniProtKB/TrEMBL%3BAcc:B5YN17];external_name=ALAT_2;logic_name=jgi_thaps3 chr7 ensembl transcript 976261 977898 . + . ID=Thaps35402;Parent=Thaps35402;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 976261 976766 . + 0 ID=Thaps35402;Parent=Thaps35402;rank=1 chr7 . exon 976261 976766 . + . ID=Thaps35402.1;Parent=Thaps35402;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 976863 977226 . + 0 ID=Thaps35402;Parent=Thaps35402;rank=2 chr7 . CDS 977311 977898 . + 0 ID=Thaps35402;Parent=Thaps35402;rank=3 chr7 ensembl protein_coding_gene 970444 971306 . + . ID=Thaps35723;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN13];external_name=Thaps35723;logic_name=jgi_thaps3 chr7 ensembl transcript 970444 971306 . + . ID=Thaps35723;Parent=Thaps35723;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 970444 970768 . + 0 ID=Thaps35723;Parent=Thaps35723;rank=1 chr7 . exon 970444 970768 . + . ID=Thaps35723.1;Parent=Thaps35723;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 970843 971186 . + 0 ID=Thaps35723;Parent=Thaps35723;rank=2 chr7 . exon 970843 971186 . + . ID=Thaps35723.2;Parent=Thaps35723;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 971244 971306 . + 0 ID=Thaps35723;Parent=Thaps35723;rank=3 chr7 . exon 971244 971306 . + . ID=Thaps35723.3;Parent=Thaps35723;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 982045 983607 . + . ID=Thaps23473;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN19];external_name=Thaps23473;logic_name=jgi_thaps3 chr7 ensembl transcript 982045 983607 . + . ID=Thaps23473;Parent=Thaps23473;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 982045 983607 . + 0 ID=Thaps23473;Parent=Thaps23473;rank=1 chr7 . exon 982045 983607 . + . ID=Thaps23473.1;Parent=Thaps23473;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 983663 985999 . - . ID=Thaps23474;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN20];external_name=Thaps23474;logic_name=jgi_thaps3 chr7 ensembl transcript 983663 985999 . - . ID=Thaps23474;Parent=Thaps23474;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 983663 985999 . - 0 ID=Thaps23474;Parent=Thaps23474;rank=1 chr7 . exon 983663 985999 . - . ID=Thaps23474.1;Parent=Thaps23474;constitutive=1;rank=1 chr7 . exon 976863 977226 . + . ID=Thaps35402.2;Parent=Thaps35402;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 977311 977898 . + . ID=Thaps35402.3;Parent=Thaps35402;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 979932 981374 . + . ID=Thaps6988;biotype=protein_coding;description=Aspartate-tRNA ligase or aspartyl tRNA synthetase [Source:UniProtKB/TrEMBL%3BAcc:B5YN18];external_name=Thaps6988;logic_name=jgi_thaps3 chr7 ensembl transcript 979932 981374 . + . ID=Thaps6988;Parent=Thaps6988;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 979932 981374 . + 0 ID=Thaps6988;Parent=Thaps6988;rank=1 chr7 . exon 979932 981374 . + . ID=Thaps6988.1;Parent=Thaps6988;constitutive=1;rank=1 chr7 . repeat_region 992628 992660 . ? . description=trf chr7 . repeat_region 992628 992660 . ? . description=dust chr7 . repeat_region 992634 992664 . ? . description=trf chr7 ensembl protein_coding_gene 991483 992586 . - . ID=Thaps23478;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN23];external_name=Thaps23478;logic_name=jgi_thaps3 chr7 ensembl transcript 991483 992586 . - . ID=Thaps23478;Parent=Thaps23478;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 991483 992586 . - 0 ID=Thaps23478;Parent=Thaps23478;rank=1 chr7 . exon 991483 992586 . - . ID=Thaps23478.1;Parent=Thaps23478;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 988069 990298 . - . ID=Thaps35527;biotype=protein_coding;description=CTP synthase [Source:UniProtKB/TrEMBL%3BAcc:B5YN22];external_name=Thaps35527;logic_name=jgi_thaps3 chr7 ensembl transcript 988069 990298 . - . ID=Thaps35527;Parent=Thaps35527;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 988069 988648 . - 0 ID=Thaps35527;Parent=Thaps35527;rank=6 chr7 . exon 988069 988648 . - . ID=Thaps35527.6;Parent=Thaps35527;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . CDS 988737 988906 . - 0 ID=Thaps35527;Parent=Thaps35527;rank=5 chr7 . exon 988737 988906 . - . ID=Thaps35527.5;Parent=Thaps35527;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 988996 989122 . - 0 ID=Thaps35527;Parent=Thaps35527;rank=4 chr7 . exon 988996 989122 . - . ID=Thaps35527.4;Parent=Thaps35527;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 989294 989681 . - 0 ID=Thaps35527;Parent=Thaps35527;rank=3 chr7 . exon 989294 989681 . - . ID=Thaps35527.3;Parent=Thaps35527;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 989754 989997 . - 0 ID=Thaps35527;Parent=Thaps35527;rank=2 chr7 . exon 989754 989997 . - . ID=Thaps35527.2;Parent=Thaps35527;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 990128 990298 . - 0 ID=Thaps35527;Parent=Thaps35527;rank=1 chr7 . exon 990128 990298 . - . ID=Thaps35527.1;Parent=Thaps35527;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 986368 986955 . + . ID=Thaps6991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN21];external_name=Thaps6991;logic_name=jgi_thaps3 chr7 ensembl transcript 986368 986955 . + . ID=Thaps6991;Parent=Thaps6991;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 986368 986955 . + 0 ID=Thaps6991;Parent=Thaps6991;rank=1 chr7 . exon 986368 986955 . + . ID=Thaps6991.1;Parent=Thaps6991;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 992769 993518 . + . ID=Thaps6996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN24];external_name=Thaps6996;logic_name=jgi_thaps3 chr7 ensembl transcript 992769 993518 . + . ID=Thaps6996;Parent=Thaps6996;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 992769 993518 . + 0 ID=Thaps6996;Parent=Thaps6996;rank=1 chr7 . exon 992769 993518 . + . ID=Thaps6996.1;Parent=Thaps6996;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 993625 994723 . - . ID=Thaps6997;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN25];external_name=Thaps6997;logic_name=jgi_thaps3 chr7 ensembl transcript 993625 994723 . - . ID=Thaps6997;Parent=Thaps6997;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 993625 994550 . - 0 ID=Thaps6997;Parent=Thaps6997;rank=2 chr7 . exon 993625 994550 . - . ID=Thaps6997.2;Parent=Thaps6997;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 994651 994723 . - 0 ID=Thaps6997;Parent=Thaps6997;rank=1 chr7 . exon 994651 994723 . - . ID=Thaps6997.1;Parent=Thaps6997;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 998659 999813 . - . ID=Thaps15292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN27];external_name=Thaps15292;logic_name=jgi_thaps3 chr7 ensembl transcript 998659 999813 . - . ID=Thaps15292;Parent=Thaps15292;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 998659 999250 . - 0 ID=Thaps15292;Parent=Thaps15292;rank=2 chr7 . exon 998659 999250 . - . ID=Thaps15292.2;Parent=Thaps15292;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 999497 999813 . - 0 ID=Thaps15292;Parent=Thaps15292;rank=1 chr7 . exon 999497 999813 . - . ID=Thaps15292.1;Parent=Thaps15292;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 997543 997891 . + . ID=Thaps19743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN26];external_name=Thaps19743;logic_name=jgi_thaps3 chr7 ensembl transcript 997543 997891 . + . ID=Thaps19743;Parent=Thaps19743;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 997543 997672 . + 0 ID=Thaps19743;Parent=Thaps19743;rank=1 chr7 . exon 997543 997672 . + . ID=Thaps19743.1;Parent=Thaps19743;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 997767 997891 . + 0 ID=Thaps19743;Parent=Thaps19743;rank=2 chr7 . exon 997767 997891 . + . ID=Thaps19743.2;Parent=Thaps19743;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . repeat_region 1009780 1009787 . ? . description=dust chr7 ensembl protein_coding_gene 1015898 1016884 . + . ID=Thaps35721;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN28];external_name=Thaps35721;logic_name=jgi_thaps3 chr7 ensembl transcript 1015898 1016884 . + . ID=Thaps35721;Parent=Thaps35721;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1015898 1016087 . + 0 ID=Thaps35721;Parent=Thaps35721;rank=1 chr7 . exon 1015898 1016087 . + . ID=Thaps35721.1;Parent=Thaps35721;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1016130 1016650 . + 0 ID=Thaps35721;Parent=Thaps35721;rank=2 chr7 . exon 1016130 1016650 . + . ID=Thaps35721.2;Parent=Thaps35721;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1016702 1016884 . + 0 ID=Thaps35721;Parent=Thaps35721;rank=3 chr7 . repeat_region 1016977 1017005 . ? . description=trf chr7 ensembl protein_coding_gene 1018436 1022159 . + . ID=Thaps263191;biotype=protein_coding;description=ArfGEF [Source:UniProtKB/TrEMBL%3BAcc:B5YN29];external_name=Thaps263191;logic_name=jgi_thaps3 chr7 ensembl transcript 1018436 1022159 . + . ID=Thaps263191;Parent=Thaps263191;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1018436 1018520 . + 0 ID=Thaps263191;Parent=Thaps263191;rank=1 chr7 . exon 1018436 1018520 . + . ID=Thaps263191.1;Parent=Thaps263191;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1018647 1019231 . + 0 ID=Thaps263191;Parent=Thaps263191;rank=2 chr7 . exon 1018647 1019231 . + . ID=Thaps263191.2;Parent=Thaps263191;constitutive=1;rank=2 chr7 . CDS 1019301 1019488 . + 0 ID=Thaps263191;Parent=Thaps263191;rank=3 chr7 . exon 1019301 1019488 . + . ID=Thaps263191.3;Parent=Thaps263191;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1019578 1019953 . + 0 ID=Thaps263191;Parent=Thaps263191;rank=4 chr7 . exon 1019578 1019953 . + . ID=Thaps263191.4;Parent=Thaps263191;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1020125 1020375 . + 0 ID=Thaps263191;Parent=Thaps263191;rank=5 chr7 . exon 1020125 1020375 . + . ID=Thaps263191.5;Parent=Thaps263191;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 1020415 1020534 . + 0 ID=Thaps263191;Parent=Thaps263191;rank=6 chr7 . exon 1020415 1020534 . + . ID=Thaps263191.6;Parent=Thaps263191;constitutive=1;rank=6 chr7 . CDS 1020614 1020920 . + 0 ID=Thaps263191;Parent=Thaps263191;rank=7 chr7 . exon 1020614 1020920 . + . ID=Thaps263191.7;Parent=Thaps263191;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . CDS 1020990 1021688 . + 0 ID=Thaps263191;Parent=Thaps263191;rank=8 chr7 . exon 1020990 1021688 . + . ID=Thaps263191.8;Parent=Thaps263191;constitutive=1;rank=8 chr7 . CDS 1021785 1022159 . + 0 ID=Thaps263191;Parent=Thaps263191;rank=9 chr7 . exon 1021785 1022159 . + . ID=Thaps263191.9;Parent=Thaps263191;constitutive=1;rank=9 chr7 . exon 1016702 1016884 . + . ID=Thaps35721.3;Parent=Thaps35721;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1027691 1028853 . + . ID=Thaps15593;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN30];external_name=Thaps15593;logic_name=jgi_thaps3 chr7 ensembl transcript 1027691 1028853 . + . ID=Thaps15593;Parent=Thaps15593;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1027691 1027793 . + 0 ID=Thaps15593;Parent=Thaps15593;rank=1 chr7 . exon 1027691 1027793 . + . ID=Thaps15593.1;Parent=Thaps15593;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1027857 1028102 . + 0 ID=Thaps15593;Parent=Thaps15593;rank=2 chr7 . exon 1027857 1028102 . + . ID=Thaps15593.2;Parent=Thaps15593;constitutive=1;rank=2 chr7 . CDS 1028198 1028334 . + 0 ID=Thaps15593;Parent=Thaps15593;rank=3 chr7 . exon 1028198 1028334 . + . ID=Thaps15593.3;Parent=Thaps15593;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1028467 1028853 . + 0 ID=Thaps15593;Parent=Thaps15593;rank=4 chr7 . exon 1028467 1028853 . + . ID=Thaps15593.4;Parent=Thaps15593;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 1034458 1036565 . + . ID=Thaps23481;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN33];external_name=Thaps23481;logic_name=jgi_thaps3 chr7 ensembl transcript 1034458 1036565 . + . ID=Thaps23481;Parent=Thaps23481;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1034458 1035476 . + 0 ID=Thaps23481;Parent=Thaps23481;rank=1 chr7 . exon 1034458 1035476 . + . ID=Thaps23481.1;Parent=Thaps23481;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1035569 1036565 . + 0 ID=Thaps23481;Parent=Thaps23481;rank=2 chr7 . exon 1035569 1036565 . + . ID=Thaps23481.2;Parent=Thaps23481;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 1031230 1031738 . + . ID=Thaps7003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN31];external_name=Thaps7003;logic_name=jgi_thaps3 chr7 ensembl transcript 1031230 1031738 . + . ID=Thaps7003;Parent=Thaps7003;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1031230 1031638 . + 0 ID=Thaps7003;Parent=Thaps7003;rank=1 chr7 . exon 1031230 1031638 . + . ID=Thaps7003.1;Parent=Thaps7003;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1031659 1031738 . + 0 ID=Thaps7003;Parent=Thaps7003;rank=2 chr7 . exon 1031659 1031738 . + . ID=Thaps7003.2;Parent=Thaps7003;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 1032918 1033994 . - . ID=Thaps7004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN32];external_name=Thaps7004;logic_name=jgi_thaps3 chr7 ensembl transcript 1032918 1033994 . - . ID=Thaps7004;Parent=Thaps7004;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1032918 1033994 . - 0 ID=Thaps7004;Parent=Thaps7004;rank=1 chr7 . exon 1032918 1033994 . - . ID=Thaps7004.1;Parent=Thaps7004;constitutive=1;rank=1 chr7 . repeat_region 1044295 1044359 . ? . description=trf chr7 ensembl protein_coding_gene 1039022 1039518 . + . ID=Thaps19431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN35];external_name=Thaps19431;logic_name=jgi_thaps3 chr7 ensembl transcript 1039022 1039518 . + . ID=Thaps19431;Parent=Thaps19431;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1039022 1039246 . + 0 ID=Thaps19431;Parent=Thaps19431;rank=1 chr7 . exon 1039022 1039246 . + . ID=Thaps19431.1;Parent=Thaps19431;constitutive=1;rank=1 chr7 . CDS 1039324 1039518 . + 0 ID=Thaps19431;Parent=Thaps19431;rank=2 chr7 . exon 1039324 1039518 . + . ID=Thaps19431.2;Parent=Thaps19431;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1042662 1044270 . + . ID=Thaps23483;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN37];external_name=Thaps23483;logic_name=jgi_thaps3 chr7 ensembl transcript 1042662 1044270 . + . ID=Thaps23483;Parent=Thaps23483;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1042662 1042748 . + 0 ID=Thaps23483;Parent=Thaps23483;rank=1 chr7 . exon 1042662 1042748 . + . ID=Thaps23483.1;Parent=Thaps23483;constitutive=1;rank=1 chr7 . CDS 1042891 1044270 . + 0 ID=Thaps23483;Parent=Thaps23483;rank=2 chr7 . exon 1042891 1044270 . + . ID=Thaps23483.2;Parent=Thaps23483;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1044368 1046102 . - . ID=Thaps23484;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN38];external_name=Thaps23484;logic_name=jgi_thaps3 chr7 ensembl transcript 1044368 1046102 . - . ID=Thaps23484;Parent=Thaps23484;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1044368 1045770 . - 0 ID=Thaps23484;Parent=Thaps23484;rank=2 chr7 . exon 1044368 1045770 . - . ID=Thaps23484.2;Parent=Thaps23484;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1045856 1046102 . - 0 ID=Thaps23484;Parent=Thaps23484;rank=1 chr7 . exon 1045856 1046102 . - . ID=Thaps23484.1;Parent=Thaps23484;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1040737 1042315 . - . ID=Thaps263193;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN36];external_name=Thaps263193;logic_name=jgi_thaps3 chr7 ensembl transcript 1040737 1042315 . - . ID=Thaps263193;Parent=Thaps263193;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1040737 1040928 . - 0 ID=Thaps263193;Parent=Thaps263193;rank=5 chr7 . exon 1040737 1040928 . - . ID=Thaps263193.5;Parent=Thaps263193;constitutive=1;rank=5 chr7 . CDS 1040977 1041189 . - 0 ID=Thaps263193;Parent=Thaps263193;rank=4 chr7 . exon 1040977 1041189 . - . ID=Thaps263193.4;Parent=Thaps263193;constitutive=1;rank=4 chr7 . CDS 1041256 1041567 . - 0 ID=Thaps263193;Parent=Thaps263193;rank=3 chr7 . exon 1041256 1041567 . - . ID=Thaps263193.3;Parent=Thaps263193;constitutive=1;rank=3 chr7 . CDS 1041607 1041747 . - 0 ID=Thaps263193;Parent=Thaps263193;rank=2 chr7 . exon 1041607 1041747 . - . ID=Thaps263193.2;Parent=Thaps263193;constitutive=1;rank=2 chr7 . CDS 1041838 1042315 . - 0 ID=Thaps263193;Parent=Thaps263193;rank=1 chr7 . exon 1041838 1042315 . - . ID=Thaps263193.1;Parent=Thaps263193;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1036780 1037715 . - . ID=Thaps7006;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN34];external_name=Thaps7006;logic_name=jgi_thaps3 chr7 ensembl transcript 1036780 1037715 . - . ID=Thaps7006;Parent=Thaps7006;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1036780 1037715 . - 0 ID=Thaps7006;Parent=Thaps7006;rank=1 chr7 . exon 1036780 1037715 . - . ID=Thaps7006.1;Parent=Thaps7006;constitutive=1;rank=1 chr7 . repeat_region 1052096 1052148 . ? . description=dust chr7 ensembl protein_coding_gene 1052866 1053234 . + . ID=Thaps19826;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN43];external_name=Thaps19826;logic_name=jgi_thaps3 chr7 ensembl transcript 1052866 1053234 . + . ID=Thaps19826;Parent=Thaps19826;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1052866 1053018 . + 0 ID=Thaps19826;Parent=Thaps19826;rank=1 chr7 . exon 1052866 1053018 . + . ID=Thaps19826.1;Parent=Thaps19826;constitutive=1;rank=1 chr7 . CDS 1053061 1053234 . + 0 ID=Thaps19826;Parent=Thaps19826;rank=2 chr7 . exon 1053061 1053234 . + . ID=Thaps19826.2;Parent=Thaps19826;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1046316 1047883 . - . ID=Thaps269248;biotype=protein_coding;description=Aspartate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B5YN39];external_name=AAT1_2;logic_name=jgi_thaps3 chr7 ensembl transcript 1046316 1047883 . - . ID=Thaps269248;Parent=Thaps269248;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1046316 1047311 . - 0 ID=Thaps269248;Parent=Thaps269248;rank=4 chr7 . exon 1046316 1047311 . - . ID=Thaps269248.4;Parent=Thaps269248;constitutive=1;rank=4 chr7 . CDS 1047407 1047526 . - 0 ID=Thaps269248;Parent=Thaps269248;rank=3 chr7 . exon 1047407 1047526 . - . ID=Thaps269248.3;Parent=Thaps269248;constitutive=1;rank=3 chr7 . CDS 1047622 1047651 . - 0 ID=Thaps269248;Parent=Thaps269248;rank=2 chr7 . exon 1047622 1047651 . - . ID=Thaps269248.2;Parent=Thaps269248;constitutive=1;rank=2 chr7 . CDS 1047779 1047883 . - 0 ID=Thaps269248;Parent=Thaps269248;rank=1 chr7 . exon 1047779 1047883 . - . ID=Thaps269248.1;Parent=Thaps269248;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1050158 1050887 . - . ID=Thaps35423;biotype=protein_coding;description=Centrin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN41];external_name=CEN1;logic_name=jgi_thaps3 chr7 ensembl transcript 1050158 1050887 . - . ID=Thaps35423;Parent=Thaps35423;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1050158 1050540 . - 0 ID=Thaps35423;Parent=Thaps35423;rank=2 chr7 . exon 1050158 1050540 . - . ID=Thaps35423.2;Parent=Thaps35423;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1050788 1050887 . - 0 ID=Thaps35423;Parent=Thaps35423;rank=1 chr7 . exon 1050788 1050887 . - . ID=Thaps35423.1;Parent=Thaps35423;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1051392 1052076 . + . ID=Thaps595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN42];external_name=Thaps595;logic_name=jgi_thaps3 chr7 ensembl transcript 1051392 1052076 . + . ID=Thaps595;Parent=Thaps595;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1051392 1051407 . + 0 ID=Thaps595;Parent=Thaps595;rank=1 chr7 . exon 1051392 1051407 . + . ID=Thaps595.1;Parent=Thaps595;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1051670 1052076 . + 0 ID=Thaps595;Parent=Thaps595;rank=2 chr7 . exon 1051670 1052076 . + . ID=Thaps595.2;Parent=Thaps595;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 1048201 1049935 . + . ID=Thaps7012;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN40];external_name=Thaps7012;logic_name=jgi_thaps3 chr7 ensembl transcript 1048201 1049935 . + . ID=Thaps7012;Parent=Thaps7012;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1048201 1048997 . + 0 ID=Thaps7012;Parent=Thaps7012;rank=1 chr7 . exon 1048201 1048997 . + . ID=Thaps7012.1;Parent=Thaps7012;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1049079 1049153 . + 0 ID=Thaps7012;Parent=Thaps7012;rank=2 chr7 . exon 1049079 1049153 . + . ID=Thaps7012.2;Parent=Thaps7012;constitutive=1;rank=2 chr7 . CDS 1049242 1049485 . + 0 ID=Thaps7012;Parent=Thaps7012;rank=3 chr7 . exon 1049242 1049485 . + . ID=Thaps7012.3;Parent=Thaps7012;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1049513 1049935 . + 0 ID=Thaps7012;Parent=Thaps7012;rank=4 chr7 . exon 1049513 1049935 . + . ID=Thaps7012.4;Parent=Thaps7012;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 1053717 1054175 . - . ID=Thaps7016;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN44];external_name=Thaps7016;logic_name=jgi_thaps3 chr7 ensembl transcript 1053717 1054175 . - . ID=Thaps7016;Parent=Thaps7016;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1053717 1054175 . - 0 ID=Thaps7016;Parent=Thaps7016;rank=1 chr7 . exon 1053717 1054175 . - . ID=Thaps7016.1;Parent=Thaps7016;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1054558 1056221 . - . ID=Thaps7017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN45];external_name=Thaps7017;logic_name=jgi_thaps3 chr7 ensembl transcript 1054558 1056221 . - . ID=Thaps7017;Parent=Thaps7017;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1054558 1054765 . - 0 ID=Thaps7017;Parent=Thaps7017;rank=4 chr7 . exon 1054558 1054765 . - . ID=Thaps7017.4;Parent=Thaps7017;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1054865 1055123 . - 0 ID=Thaps7017;Parent=Thaps7017;rank=3 chr7 . exon 1054865 1055123 . - . ID=Thaps7017.3;Parent=Thaps7017;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1055205 1055319 . - 0 ID=Thaps7017;Parent=Thaps7017;rank=2 chr7 . exon 1055205 1055319 . - . ID=Thaps7017.2;Parent=Thaps7017;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1055406 1056221 . - 0 ID=Thaps7017;Parent=Thaps7017;rank=1 chr7 . exon 1055406 1056221 . - . ID=Thaps7017.1;Parent=Thaps7017;constitutive=1;rank=1 chr7 . repeat_region 1056332 1056375 . - . description=MuDR1_TP chr7 . repeat_region 1057937 1057965 . ? . description=trf chr7 . repeat_region 1057941 1057961 . ? . description=trf chr7 . repeat_region 1064346 1064815 . ? . description=trf chr7 ensembl protein_coding_gene 1060588 1061094 . - . ID=Thaps17910;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN48];external_name=Thaps17910;logic_name=jgi_thaps3 chr7 ensembl transcript 1060588 1061094 . - . ID=Thaps17910;Parent=Thaps17910;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1060588 1061094 . - 0 ID=Thaps17910;Parent=Thaps17910;rank=1 chr7 . exon 1060588 1061094 . - . ID=Thaps17910.1;Parent=Thaps17910;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1056705 1057529 . + . ID=Thaps23486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN46];external_name=Thaps23486;logic_name=jgi_thaps3 chr7 ensembl transcript 1056705 1057529 . + . ID=Thaps23486;Parent=Thaps23486;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1056705 1057529 . + 0 ID=Thaps23486;Parent=Thaps23486;rank=1 chr7 . exon 1056705 1057529 . + . ID=Thaps23486.1;Parent=Thaps23486;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1058358 1059761 . - . ID=Thaps7019;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN47];external_name=Thaps7019;logic_name=jgi_thaps3 chr7 ensembl transcript 1058358 1059761 . - . ID=Thaps7019;Parent=Thaps7019;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1058358 1058394 . - 0 ID=Thaps7019;Parent=Thaps7019;rank=2 chr7 . exon 1058358 1058394 . - . ID=Thaps7019.2;Parent=Thaps7019;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1058479 1059761 . - 0 ID=Thaps7019;Parent=Thaps7019;rank=1 chr7 . exon 1058479 1059761 . - . ID=Thaps7019.1;Parent=Thaps7019;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1061795 1062335 . + . ID=Thaps7021;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN49];external_name=Thaps7021;logic_name=jgi_thaps3 chr7 ensembl transcript 1061795 1062335 . + . ID=Thaps7021;Parent=Thaps7021;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1061795 1061854 . + 0 ID=Thaps7021;Parent=Thaps7021;rank=1 chr7 . exon 1061795 1061854 . + . ID=Thaps7021.1;Parent=Thaps7021;constitutive=1;rank=1 chr7 . CDS 1061988 1062335 . + 0 ID=Thaps7021;Parent=Thaps7021;rank=2 chr7 . exon 1061988 1062335 . + . ID=Thaps7021.2;Parent=Thaps7021;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1062458 1063363 . - . ID=Thaps7022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN50];external_name=Thaps7022;logic_name=jgi_thaps3 chr7 ensembl transcript 1062458 1063363 . - . ID=Thaps7022;Parent=Thaps7022;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1062458 1063363 . - 0 ID=Thaps7022;Parent=Thaps7022;rank=1 chr7 . exon 1062458 1063363 . - . ID=Thaps7022.1;Parent=Thaps7022;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1063883 1064248 . - . ID=Thaps7023;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN51];external_name=Thaps7023;logic_name=jgi_thaps3 chr7 ensembl transcript 1063883 1064248 . - . ID=Thaps7023;Parent=Thaps7023;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1063883 1064248 . - 0 ID=Thaps7023;Parent=Thaps7023;rank=1 chr7 . exon 1063883 1064248 . - . ID=Thaps7023.1;Parent=Thaps7023;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1064397 1066667 . - . ID=Thaps7024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN52];external_name=Thaps7024;logic_name=jgi_thaps3 chr7 ensembl transcript 1064397 1066667 . - . ID=Thaps7024;Parent=Thaps7024;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1064397 1066667 . - 0 ID=Thaps7024;Parent=Thaps7024;rank=1 chr7 . exon 1064397 1066667 . - . ID=Thaps7024.1;Parent=Thaps7024;constitutive=1;rank=1 chr7 ensembl tRNA_gene 1068478 1068576 . + . ID=EPrTPOG00000000087;biotype=tRNA;description=tRNA-Tyr for anticodon GUA [Source:TRNASCAN_SE%3BAcc:tRNA-Tyr];external_name=tRNA-Tyr;logic_name=ncrna_eg chr7 ensembl transcript 1068478 1068576 . + . ID=EPrTPOT00000000087;Parent=EPrTPOG00000000087;biotype=tRNA;logic_name=ncrna_eg chr7 ensembl tRNA_gene 1068390 1068463 . + . ID=EPrTPOG00000000114;biotype=tRNA;description=tRNA-Ile for anticodon AAU [Source:TRNASCAN_SE%3BAcc:tRNA-Ile];external_name=tRNA-Ile;logic_name=ncrna_eg chr7 ensembl transcript 1068390 1068463 . + . ID=EPrTPOT00000000114;Parent=EPrTPOG00000000114;biotype=tRNA;logic_name=ncrna_eg chr7 . exon 1068478 1068576 . + . ID=EPrTPOE00000000087;Parent=EPrTPOT00000000087;constitutive=1;rank=1 chr7 . exon 1068390 1068463 . + . ID=EPrTPOE00000000114;Parent=EPrTPOT00000000114;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1072379 1073617 . - . ID=Thaps14106;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN56];external_name=Thaps14106;logic_name=jgi_thaps3 chr7 ensembl transcript 1072379 1073617 . - . ID=Thaps14106;Parent=Thaps14106;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1072379 1073617 . - 0 ID=Thaps14106;Parent=Thaps14106;rank=1 chr7 . exon 1072379 1073617 . - . ID=Thaps14106.1;Parent=Thaps14106;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1069016 1069647 . - . ID=Thaps263198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN54];external_name=Thaps263198;logic_name=jgi_thaps3 chr7 ensembl transcript 1069016 1069647 . - . ID=Thaps263198;Parent=Thaps263198;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1069016 1069428 . - 0 ID=Thaps263198;Parent=Thaps263198;rank=2 chr7 . exon 1069016 1069428 . - . ID=Thaps263198.2;Parent=Thaps263198;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1069495 1069647 . - 0 ID=Thaps263198;Parent=Thaps263198;rank=1 chr7 . exon 1069495 1069647 . - . ID=Thaps263198.1;Parent=Thaps263198;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1066924 1068246 . + . ID=Thaps7025;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN53];external_name=Thaps7025;logic_name=jgi_thaps3 chr7 ensembl transcript 1066924 1068246 . + . ID=Thaps7025;Parent=Thaps7025;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1066924 1068246 . + 0 ID=Thaps7025;Parent=Thaps7025;rank=1 chr7 . exon 1066924 1068246 . + . ID=Thaps7025.1;Parent=Thaps7025;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1071032 1072165 . + . ID=Thaps7027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN55];external_name=Thaps7027;logic_name=jgi_thaps3 chr7 ensembl transcript 1071032 1072165 . + . ID=Thaps7027;Parent=Thaps7027;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1071032 1072165 . + 0 ID=Thaps7027;Parent=Thaps7027;rank=1 chr7 . exon 1071032 1072165 . + . ID=Thaps7027.1;Parent=Thaps7027;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1073850 1076054 . + . ID=Thaps7029;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN57];external_name=Thaps7029;logic_name=jgi_thaps3 chr7 ensembl transcript 1073850 1076054 . + . ID=Thaps7029;Parent=Thaps7029;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1073850 1073890 . + 0 ID=Thaps7029;Parent=Thaps7029;rank=1 chr7 . exon 1073850 1073890 . + . ID=Thaps7029.1;Parent=Thaps7029;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1074128 1076054 . + 0 ID=Thaps7029;Parent=Thaps7029;rank=2 chr7 . exon 1074128 1076054 . + . ID=Thaps7029.2;Parent=Thaps7029;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 1081456 1083267 . - . ID=Thaps23490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN61];external_name=Thaps23490;logic_name=jgi_thaps3 chr7 ensembl transcript 1081456 1083267 . - . ID=Thaps23490;Parent=Thaps23490;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1081456 1083267 . - 0 ID=Thaps23490;Parent=Thaps23490;rank=1 chr7 . exon 1081456 1083267 . - . ID=Thaps23490.1;Parent=Thaps23490;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1076509 1077707 . - . ID=Thaps35224;biotype=protein_coding;description=Aldo/keto reductase [Source:UniProtKB/TrEMBL%3BAcc:B5YN58];external_name=Thaps35224;logic_name=jgi_thaps3 chr7 ensembl transcript 1076509 1077707 . - . ID=Thaps35224;Parent=Thaps35224;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1076509 1077001 . - 0 ID=Thaps35224;Parent=Thaps35224;rank=2 chr7 . exon 1076509 1077001 . - . ID=Thaps35224.2;Parent=Thaps35224;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1077124 1077707 . - 0 ID=Thaps35224;Parent=Thaps35224;rank=1 chr7 . exon 1077124 1077707 . - . ID=Thaps35224.1;Parent=Thaps35224;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1083661 1084092 . - . ID=Thaps35519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN62];external_name=Thaps35519;logic_name=jgi_thaps3 chr7 ensembl transcript 1083661 1084092 . - . ID=Thaps35519;Parent=Thaps35519;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1083661 1084092 . - 0 ID=Thaps35519;Parent=Thaps35519;rank=1 chr7 . exon 1083661 1084092 . - . ID=Thaps35519.1;Parent=Thaps35519;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1078520 1079077 . + . ID=Thaps7031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN59];external_name=Thaps7031;logic_name=jgi_thaps3 chr7 ensembl transcript 1078520 1079077 . + . ID=Thaps7031;Parent=Thaps7031;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1078520 1079077 . + 0 ID=Thaps7031;Parent=Thaps7031;rank=1 chr7 . exon 1078520 1079077 . + . ID=Thaps7031.1;Parent=Thaps7031;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1079212 1080051 . - . ID=Thaps7032;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN60];external_name=Thaps7032;logic_name=jgi_thaps3 chr7 ensembl transcript 1079212 1080051 . - . ID=Thaps7032;Parent=Thaps7032;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1079212 1080051 . - 0 ID=Thaps7032;Parent=Thaps7032;rank=1 chr7 . exon 1079212 1080051 . - . ID=Thaps7032.1;Parent=Thaps7032;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1084458 1085255 . + . ID=Thaps7035;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN63];external_name=Thaps7035;logic_name=jgi_thaps3 chr7 ensembl transcript 1084458 1085255 . + . ID=Thaps7035;Parent=Thaps7035;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1084458 1085255 . + 0 ID=Thaps7035;Parent=Thaps7035;rank=1 chr7 . exon 1084458 1085255 . + . ID=Thaps7035.1;Parent=Thaps7035;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1085675 1087464 . + . ID=Thaps7036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN64];external_name=Thaps7036;logic_name=jgi_thaps3 chr7 ensembl transcript 1085675 1087464 . + . ID=Thaps7036;Parent=Thaps7036;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1085675 1086998 . + 0 ID=Thaps7036;Parent=Thaps7036;rank=1 chr7 . exon 1085675 1086998 . + . ID=Thaps7036.1;Parent=Thaps7036;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1087071 1087126 . + 0 ID=Thaps7036;Parent=Thaps7036;rank=2 chr7 . CDS 1087207 1087464 . + 0 ID=Thaps7036;Parent=Thaps7036;rank=3 chr7 ensembl protein_coding_gene 1088727 1095979 . - . ID=Thaps23491;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN66];external_name=Thaps23491;logic_name=jgi_thaps3 chr7 ensembl transcript 1088727 1095979 . - . ID=Thaps23491;Parent=Thaps23491;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1088727 1089346 . - 0 ID=Thaps23491;Parent=Thaps23491;rank=7 chr7 . exon 1088727 1089346 . - . ID=Thaps23491.7;Parent=Thaps23491;constitutive=1;ensembl_end_phase=2;rank=7 chr7 . CDS 1089428 1092357 . - 0 ID=Thaps23491;Parent=Thaps23491;rank=6 chr7 . exon 1089428 1092357 . - . ID=Thaps23491.6;Parent=Thaps23491;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . CDS 1092572 1092654 . - 0 ID=Thaps23491;Parent=Thaps23491;rank=5 chr7 . exon 1092572 1092654 . - . ID=Thaps23491.5;Parent=Thaps23491;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 1092704 1092773 . - 0 ID=Thaps23491;Parent=Thaps23491;rank=4 chr7 . exon 1092704 1092773 . - . ID=Thaps23491.4;Parent=Thaps23491;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1092986 1093341 . - 0 ID=Thaps23491;Parent=Thaps23491;rank=3 chr7 . exon 1092986 1093341 . - . ID=Thaps23491.3;Parent=Thaps23491;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1093436 1094968 . - 0 ID=Thaps23491;Parent=Thaps23491;rank=2 chr7 . exon 1093436 1094968 . - . ID=Thaps23491.2;Parent=Thaps23491;constitutive=1;rank=2 chr7 . CDS 1095053 1095979 . - 0 ID=Thaps23491;Parent=Thaps23491;rank=1 chr7 . exon 1095053 1095979 . - . ID=Thaps23491.1;Parent=Thaps23491;constitutive=1;rank=1 chr7 . exon 1087071 1087126 . + . ID=Thaps7036.2;Parent=Thaps7036;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 1087207 1087464 . + . ID=Thaps7036.3;Parent=Thaps7036;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1087613 1088671 . + . ID=Thaps7037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN65];external_name=Thaps7037;logic_name=jgi_thaps3 chr7 ensembl transcript 1087613 1088671 . + . ID=Thaps7037;Parent=Thaps7037;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1087613 1088671 . + 0 ID=Thaps7037;Parent=Thaps7037;rank=1 chr7 . exon 1087613 1088671 . + . ID=Thaps7037.1;Parent=Thaps7037;constitutive=1;rank=1 chr7 . repeat_region 1097019 1097525 . + . description=MuDR1_TP chr7 . repeat_region 1097099 1097124 . ? . description=dust chr7 . repeat_region 1097349 1097372 . ? . description=trf chr7 . repeat_region 1097511 1099500 . + . description=MuDR1_TP chr7 . repeat_region 1098658 1098711 . ? . description=trf chr7 . repeat_region 1099396 1099414 . ? . description=dust chr7 . repeat_region 1102616 1102656 . ? . description=trf chr7 . repeat_region 1102616 1102656 . ? . description=dust chr7 ensembl protein_coding_gene 1100343 1103529 . - . ID=Thaps23492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN67];external_name=Thaps23492;logic_name=jgi_thaps3 chr7 ensembl transcript 1100343 1103529 . - . ID=Thaps23492;Parent=Thaps23492;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1100343 1100526 . - 0 ID=Thaps23492;Parent=Thaps23492;rank=7 chr7 . exon 1100343 1100526 . - . ID=Thaps23492.7;Parent=Thaps23492;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . CDS 1100728 1101766 . - 0 ID=Thaps23492;Parent=Thaps23492;rank=6 chr7 . exon 1100728 1101766 . - . ID=Thaps23492.6;Parent=Thaps23492;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . CDS 1102038 1102140 . - 0 ID=Thaps23492;Parent=Thaps23492;rank=5 chr7 . exon 1102038 1102140 . - . ID=Thaps23492.5;Parent=Thaps23492;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 1102278 1102377 . - 0 ID=Thaps23492;Parent=Thaps23492;rank=4 chr7 . exon 1102278 1102377 . - . ID=Thaps23492.4;Parent=Thaps23492;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1102464 1102578 . - 0 ID=Thaps23492;Parent=Thaps23492;rank=3 chr7 . exon 1102464 1102578 . - . ID=Thaps23492.3;Parent=Thaps23492;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1102697 1102912 . - 0 ID=Thaps23492;Parent=Thaps23492;rank=2 chr7 . exon 1102697 1102912 . - . ID=Thaps23492.2;Parent=Thaps23492;constitutive=1;rank=2 chr7 . CDS 1103007 1103529 . - 0 ID=Thaps23492;Parent=Thaps23492;rank=1 chr7 . exon 1103007 1103529 . - . ID=Thaps23492.1;Parent=Thaps23492;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1105810 1111615 . - . ID=Thaps23494;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN69];external_name=Thaps23494;logic_name=jgi_thaps3 chr7 ensembl transcript 1105810 1111615 . - . ID=Thaps23494;Parent=Thaps23494;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1105810 1107011 . - 0 ID=Thaps23494;Parent=Thaps23494;rank=7 chr7 . exon 1105810 1107011 . - . ID=Thaps23494.7;Parent=Thaps23494;constitutive=1;ensembl_end_phase=2;rank=7 chr7 . CDS 1107121 1107366 . - 0 ID=Thaps23494;Parent=Thaps23494;rank=6 chr7 . CDS 1107387 1107432 . - 0 ID=Thaps23494;Parent=Thaps23494;rank=5 chr7 . CDS 1107478 1107567 . - 0 ID=Thaps23494;Parent=Thaps23494;rank=4 chr7 . CDS 1107671 1108938 . - 0 ID=Thaps23494;Parent=Thaps23494;rank=3 chr7 . CDS 1109160 1111098 . - 0 ID=Thaps23494;Parent=Thaps23494;rank=2 chr7 . CDS 1111187 1111615 . - 0 ID=Thaps23494;Parent=Thaps23494;rank=1 chr7 ensembl protein_coding_gene 1103888 1105192 . + . ID=Thaps263200;biotype=protein_coding;description=Monogalactosyldiacylglycerol synthase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN68];external_name=Thaps263200;logic_name=jgi_thaps3 chr7 ensembl transcript 1103888 1105192 . + . ID=Thaps263200;Parent=Thaps263200;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1103888 1103959 . + 0 ID=Thaps263200;Parent=Thaps263200;rank=1 chr7 . exon 1103888 1103959 . + . ID=Thaps263200.1;Parent=Thaps263200;constitutive=1;rank=1 chr7 . CDS 1103978 1104521 . + 0 ID=Thaps263200;Parent=Thaps263200;rank=2 chr7 . exon 1103978 1104521 . + . ID=Thaps263200.2;Parent=Thaps263200;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1104579 1104688 . + 0 ID=Thaps263200;Parent=Thaps263200;rank=3 chr7 . exon 1104579 1104688 . + . ID=Thaps263200.3;Parent=Thaps263200;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1104701 1105192 . + 0 ID=Thaps263200;Parent=Thaps263200;rank=4 chr7 . exon 1104701 1105192 . + . ID=Thaps263200.4;Parent=Thaps263200;constitutive=1;rank=4 chr7 . repeat_region 1112338 1112539 . + . description=Gypsy1LTR_TP chr7 . repeat_region 1112540 1117194 . + . description=Gypsy1I_TP chr7 . exon 1107121 1107366 . - . ID=Thaps23494.6;Parent=Thaps23494;constitutive=1;rank=6 chr7 . exon 1107387 1107432 . - . ID=Thaps23494.5;Parent=Thaps23494;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . exon 1107478 1107567 . - . ID=Thaps23494.4;Parent=Thaps23494;constitutive=1;rank=4 chr7 . exon 1107671 1108938 . - . ID=Thaps23494.3;Parent=Thaps23494;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 1109160 1111098 . - . ID=Thaps23494.2;Parent=Thaps23494;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 1111187 1111615 . - . ID=Thaps23494.1;Parent=Thaps23494;constitutive=1;rank=1 chr7 ensembl gene 1114777 1115578 . + . ID=Thaps263201;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 1114777 1115578 . + . ID=Thaps263201;Parent=Thaps263201;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 1114777 1115578 . + . ID=Thaps263201.1;Parent=Thaps263201;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 1115834 1115879 . ? . description=trf chr7 . repeat_region 1117211 1117246 . ? . description=trf chr7 . repeat_region 1117211 1117246 . ? . description=dust chr7 . repeat_region 1117213 1117255 . ? . description=trf chr7 . repeat_region 1119301 1119309 . ? . description=dust chr7 . repeat_region 1119795 1119803 . ? . description=dust chr7 ensembl protein_coding_gene 1117415 1119137 . - . ID=Thaps263203;biotype=protein_coding;description=Hypothetical glutamyl-tRNA amidotransferase [Source:UniProtKB/TrEMBL%3BAcc:B5YN70];external_name=Thaps263203;logic_name=jgi_thaps3 chr7 ensembl transcript 1117415 1119137 . - . ID=Thaps263203;Parent=Thaps263203;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1117415 1117483 . - 0 ID=Thaps263203;Parent=Thaps263203;rank=8 chr7 . exon 1117415 1117483 . - . ID=Thaps263203.8;Parent=Thaps263203;constitutive=1;rank=8 chr7 . CDS 1117517 1117613 . - 0 ID=Thaps263203;Parent=Thaps263203;rank=7 chr7 . exon 1117517 1117613 . - . ID=Thaps263203.7;Parent=Thaps263203;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . CDS 1117689 1117951 . - 0 ID=Thaps263203;Parent=Thaps263203;rank=6 chr7 . exon 1117689 1117951 . - . ID=Thaps263203.6;Parent=Thaps263203;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . CDS 1117976 1118093 . - 0 ID=Thaps263203;Parent=Thaps263203;rank=5 chr7 . exon 1117976 1118093 . - . ID=Thaps263203.5;Parent=Thaps263203;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 1118109 1118283 . - 0 ID=Thaps263203;Parent=Thaps263203;rank=4 chr7 . exon 1118109 1118283 . - . ID=Thaps263203.4;Parent=Thaps263203;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1118344 1118653 . - 0 ID=Thaps263203;Parent=Thaps263203;rank=3 chr7 . exon 1118344 1118653 . - . ID=Thaps263203.3;Parent=Thaps263203;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1118894 1119027 . - 0 ID=Thaps263203;Parent=Thaps263203;rank=2 chr7 . exon 1118894 1119027 . - . ID=Thaps263203.2;Parent=Thaps263203;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1119073 1119137 . - 0 ID=Thaps263203;Parent=Thaps263203;rank=1 chr7 . exon 1119073 1119137 . - . ID=Thaps263203.1;Parent=Thaps263203;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1125663 1126619 . + . ID=Thaps263205;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN74];external_name=Thaps263205;logic_name=jgi_thaps3 chr7 ensembl transcript 1125663 1126619 . + . ID=Thaps263205;Parent=Thaps263205;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1125663 1125773 . + 0 ID=Thaps263205;Parent=Thaps263205;rank=1 chr7 . exon 1125663 1125773 . + . ID=Thaps263205.1;Parent=Thaps263205;constitutive=1;rank=1 chr7 . CDS 1125874 1126138 . + 0 ID=Thaps263205;Parent=Thaps263205;rank=2 chr7 . CDS 1126216 1126619 . + 0 ID=Thaps263205;Parent=Thaps263205;rank=3 chr7 ensembl protein_coding_gene 1122794 1124259 . - . ID=Thaps596;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN73];external_name=Thaps596;logic_name=jgi_thaps3 chr7 ensembl transcript 1122794 1124259 . - . ID=Thaps596;Parent=Thaps596;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1122794 1122806 . - 0 ID=Thaps596;Parent=Thaps596;rank=4 chr7 . exon 1122794 1122806 . - . ID=Thaps596.4;Parent=Thaps596;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1122845 1123884 . - 0 ID=Thaps596;Parent=Thaps596;rank=3 chr7 . exon 1122845 1123884 . - . ID=Thaps596.3;Parent=Thaps596;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1123975 1124093 . - 0 ID=Thaps596;Parent=Thaps596;rank=2 chr7 . exon 1123975 1124093 . - . ID=Thaps596.2;Parent=Thaps596;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1124124 1124259 . - 0 ID=Thaps596;Parent=Thaps596;rank=1 chr7 . exon 1124124 1124259 . - . ID=Thaps596.1;Parent=Thaps596;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1119828 1120655 . + . ID=Thaps7043;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN71];external_name=Thaps7043;logic_name=jgi_thaps3 chr7 ensembl transcript 1119828 1120655 . + . ID=Thaps7043;Parent=Thaps7043;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1119828 1120655 . + 0 ID=Thaps7043;Parent=Thaps7043;rank=1 chr7 . exon 1119828 1120655 . + . ID=Thaps7043.1;Parent=Thaps7043;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1120883 1122630 . - . ID=Thaps7044;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN72];external_name=Thaps7044;logic_name=jgi_thaps3 chr7 ensembl transcript 1120883 1122630 . - . ID=Thaps7044;Parent=Thaps7044;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1120883 1121683 . - 0 ID=Thaps7044;Parent=Thaps7044;rank=2 chr7 . exon 1120883 1121683 . - . ID=Thaps7044.2;Parent=Thaps7044;constitutive=1;rank=2 chr7 . CDS 1121773 1122630 . - 0 ID=Thaps7044;Parent=Thaps7044;rank=1 chr7 . exon 1121773 1122630 . - . ID=Thaps7044.1;Parent=Thaps7044;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1126994 1129251 . + . ID=Thaps23496;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN75];external_name=Thaps23496;logic_name=jgi_thaps3 chr7 ensembl transcript 1126994 1129251 . + . ID=Thaps23496;Parent=Thaps23496;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1126994 1127458 . + 0 ID=Thaps23496;Parent=Thaps23496;rank=1 chr7 . exon 1126994 1127458 . + . ID=Thaps23496.1;Parent=Thaps23496;constitutive=1;rank=1 chr7 . CDS 1127582 1127911 . + 0 ID=Thaps23496;Parent=Thaps23496;rank=2 chr7 . exon 1127582 1127911 . + . ID=Thaps23496.2;Parent=Thaps23496;constitutive=1;rank=2 chr7 . CDS 1127998 1128269 . + 0 ID=Thaps23496;Parent=Thaps23496;rank=3 chr7 . exon 1127998 1128269 . + . ID=Thaps23496.3;Parent=Thaps23496;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1128357 1129251 . + 0 ID=Thaps23496;Parent=Thaps23496;rank=4 chr7 . exon 1128357 1129251 . + . ID=Thaps23496.4;Parent=Thaps23496;constitutive=1;ensembl_end_phase=1;rank=4 chr7 ensembl protein_coding_gene 1131610 1139625 . + . ID=Thaps23497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN77];external_name=Thaps23497;logic_name=jgi_thaps3 chr7 ensembl transcript 1131610 1139625 . + . ID=Thaps23497;Parent=Thaps23497;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1131610 1131873 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=1 chr7 . exon 1131610 1131873 . + . ID=Thaps23497.1;Parent=Thaps23497;constitutive=1;rank=1 chr7 . CDS 1132009 1132930 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=2 chr7 . exon 1132009 1132930 . + . ID=Thaps23497.2;Parent=Thaps23497;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1133013 1133577 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=3 chr7 . exon 1133013 1133577 . + . ID=Thaps23497.3;Parent=Thaps23497;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1133667 1134351 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=4 chr7 . exon 1133667 1134351 . + . ID=Thaps23497.4;Parent=Thaps23497;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1134547 1134891 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=5 chr7 . exon 1134547 1134891 . + . ID=Thaps23497.5;Parent=Thaps23497;constitutive=1;rank=5 chr7 . CDS 1134969 1135131 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=6 chr7 . exon 1134969 1135131 . + . ID=Thaps23497.6;Parent=Thaps23497;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . CDS 1135216 1135601 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=7 chr7 . exon 1135216 1135601 . + . ID=Thaps23497.7;Parent=Thaps23497;constitutive=1;ensembl_end_phase=2;rank=7 chr7 . CDS 1135655 1136215 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=8 chr7 . exon 1135655 1136215 . + . ID=Thaps23497.8;Parent=Thaps23497;constitutive=1;rank=8 chr7 . CDS 1136306 1136392 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=9 chr7 . CDS 1136485 1139625 . + 0 ID=Thaps23497;Parent=Thaps23497;rank=10 chr7 . exon 1125874 1126138 . + . ID=Thaps263205.2;Parent=Thaps263205;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 1126216 1126619 . + . ID=Thaps263205.3;Parent=Thaps263205;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1129711 1131371 . - . ID=Thaps7048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN76];external_name=Thaps7048;logic_name=jgi_thaps3 chr7 ensembl transcript 1129711 1131371 . - . ID=Thaps7048;Parent=Thaps7048;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1129711 1129851 . - 0 ID=Thaps7048;Parent=Thaps7048;rank=3 chr7 . exon 1129711 1129851 . - . ID=Thaps7048.3;Parent=Thaps7048;constitutive=1;rank=3 chr7 . CDS 1129941 1130030 . - 0 ID=Thaps7048;Parent=Thaps7048;rank=2 chr7 . exon 1129941 1130030 . - . ID=Thaps7048.2;Parent=Thaps7048;constitutive=1;rank=2 chr7 . CDS 1130103 1131371 . - 0 ID=Thaps7048;Parent=Thaps7048;rank=1 chr7 . exon 1130103 1131371 . - . ID=Thaps7048.1;Parent=Thaps7048;constitutive=1;rank=1 chr7 . repeat_region 1136921 1136965 . ? . description=trf chr7 . repeat_region 1140337 1140483 . ? . description=trf chr7 ensembl tRNA_gene 1140331 1140403 . + . ID=EPrTPOG00000000011;biotype=tRNA;description=tRNA-Ala for anticodon CGC [Source:TRNASCAN_SE%3BAcc:tRNA-Ala];external_name=tRNA-Ala;logic_name=ncrna_eg chr7 ensembl transcript 1140331 1140403 . + . ID=EPrTPOT00000000006;Parent=EPrTPOG00000000011;biotype=tRNA;logic_name=ncrna_eg chr7 ensembl tRNA_gene 1140331 1140476 . + . ID=EPrTPOG00000000070;biotype=tRNA;description=tRNA-Ala for anticodon CGC [Source:TRNASCAN_SE%3BAcc:tRNA-Ala];external_name=tRNA-Ala;logic_name=ncrna_eg chr7 ensembl transcript 1140331 1140476 . + . ID=EPrTPOT00000000070;Parent=EPrTPOG00000000070;biotype=tRNA;logic_name=ncrna_eg chr7 . exon 1140331 1140403 . + . ID=EPrTPOE00000000011;Parent=EPrTPOT00000000006;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . exon 1140331 1140476 . + . ID=EPrTPOE00000000070;Parent=EPrTPOT00000000070;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . exon 1136306 1136392 . + . ID=Thaps23497.9;Parent=Thaps23497;constitutive=1;rank=9 chr7 . exon 1136485 1139625 . + . ID=Thaps23497.10;Parent=Thaps23497;constitutive=1;rank=10 chr7 ensembl protein_coding_gene 1141495 1142568 . + . ID=Thaps269254;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN78];external_name=Thaps269254;logic_name=jgi_thaps3 chr7 ensembl transcript 1141495 1142568 . + . ID=Thaps269254;Parent=Thaps269254;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1141495 1141990 . + 0 ID=Thaps269254;Parent=Thaps269254;rank=1 chr7 . exon 1141495 1141990 . + . ID=Thaps269254.1;Parent=Thaps269254;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1142084 1142568 . + 0 ID=Thaps269254;Parent=Thaps269254;rank=2 chr7 . exon 1142084 1142568 . + . ID=Thaps269254.2;Parent=Thaps269254;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 1143752 1146316 . - . ID=Thaps269255;biotype=protein_coding;description=Glutamine-dependent NAD(+) synthetase [Source:UniProtKB/TrEMBL%3BAcc:B5YN79];external_name=Thaps269255;logic_name=jgi_thaps3 chr7 ensembl transcript 1143752 1146316 . - . ID=Thaps269255;Parent=Thaps269255;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1143752 1144836 . - 0 ID=Thaps269255;Parent=Thaps269255;rank=3 chr7 . exon 1143752 1144836 . - . ID=Thaps269255.3;Parent=Thaps269255;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1145059 1145197 . - 0 ID=Thaps269255;Parent=Thaps269255;rank=2 chr7 . exon 1145059 1145197 . - . ID=Thaps269255.2;Parent=Thaps269255;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1145237 1146316 . - 0 ID=Thaps269255;Parent=Thaps269255;rank=1 chr7 . exon 1145237 1146316 . - . ID=Thaps269255.1;Parent=Thaps269255;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1146582 1148297 . + . ID=Thaps23500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN80];external_name=Thaps23500;logic_name=jgi_thaps3 chr7 ensembl transcript 1146582 1148297 . + . ID=Thaps23500;Parent=Thaps23500;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1146582 1148297 . + 0 ID=Thaps23500;Parent=Thaps23500;rank=1 chr7 . exon 1146582 1148297 . + . ID=Thaps23500.1;Parent=Thaps23500;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1152900 1154460 . - . ID=Thaps269257;biotype=protein_coding;description=Subtilisin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B5YN83];external_name=Thaps269257;logic_name=jgi_thaps3 chr7 ensembl transcript 1152900 1154460 . - . ID=Thaps269257;Parent=Thaps269257;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1152900 1153105 . - 0 ID=Thaps269257;Parent=Thaps269257;rank=4 chr7 . exon 1152900 1153105 . - . ID=Thaps269257.4;Parent=Thaps269257;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1153183 1153608 . - 0 ID=Thaps269257;Parent=Thaps269257;rank=3 chr7 . exon 1153183 1153608 . - . ID=Thaps269257.3;Parent=Thaps269257;constitutive=1;rank=3 chr7 . CDS 1153690 1154038 . - 0 ID=Thaps269257;Parent=Thaps269257;rank=2 chr7 . exon 1153690 1154038 . - . ID=Thaps269257.2;Parent=Thaps269257;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1154116 1154460 . - 0 ID=Thaps269257;Parent=Thaps269257;rank=1 chr7 . exon 1154116 1154460 . - . ID=Thaps269257.1;Parent=Thaps269257;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1148519 1148977 . - . ID=Thaps35424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN81];external_name=Thaps35424;logic_name=jgi_thaps3 chr7 ensembl transcript 1148519 1148977 . - . ID=Thaps35424;Parent=Thaps35424;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1148519 1148977 . - 0 ID=Thaps35424;Parent=Thaps35424;rank=1 chr7 . exon 1148519 1148977 . - . ID=Thaps35424.1;Parent=Thaps35424;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1150116 1151324 . + . ID=Thaps7054;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN82];external_name=Thaps7054;logic_name=jgi_thaps3 chr7 ensembl transcript 1150116 1151324 . + . ID=Thaps7054;Parent=Thaps7054;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1150116 1151324 . + 0 ID=Thaps7054;Parent=Thaps7054;rank=1 chr7 . exon 1150116 1151324 . + . ID=Thaps7054.1;Parent=Thaps7054;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1155179 1157105 . - . ID=Thaps7056;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN84];external_name=Thaps7056;logic_name=jgi_thaps3 chr7 ensembl transcript 1155179 1157105 . - . ID=Thaps7056;Parent=Thaps7056;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1155179 1156025 . - 0 ID=Thaps7056;Parent=Thaps7056;rank=4 chr7 . exon 1155179 1156025 . - . ID=Thaps7056.4;Parent=Thaps7056;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1156107 1156794 . - 0 ID=Thaps7056;Parent=Thaps7056;rank=3 chr7 . CDS 1156859 1156905 . - 0 ID=Thaps7056;Parent=Thaps7056;rank=2 chr7 . CDS 1157020 1157105 . - 0 ID=Thaps7056;Parent=Thaps7056;rank=1 chr7 . repeat_region 1157431 1157438 . ? . description=dust chr7 . repeat_region 1161369 1161379 . ? . description=dust chr7 . repeat_region 1162675 1162700 . ? . description=trf chr7 ensembl protein_coding_gene 1159492 1161145 . - . ID=Thaps23503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN86];external_name=Thaps23503;logic_name=jgi_thaps3 chr7 ensembl transcript 1159492 1161145 . - . ID=Thaps23503;Parent=Thaps23503;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1159492 1159971 . - 0 ID=Thaps23503;Parent=Thaps23503;rank=5 chr7 . exon 1159492 1159971 . - . ID=Thaps23503.5;Parent=Thaps23503;constitutive=1;rank=5 chr7 . CDS 1160056 1160116 . - 0 ID=Thaps23503;Parent=Thaps23503;rank=4 chr7 . exon 1160056 1160116 . - . ID=Thaps23503.4;Parent=Thaps23503;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1160215 1160554 . - 0 ID=Thaps23503;Parent=Thaps23503;rank=3 chr7 . exon 1160215 1160554 . - . ID=Thaps23503.3;Parent=Thaps23503;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1160650 1160773 . - 0 ID=Thaps23503;Parent=Thaps23503;rank=2 chr7 . exon 1160650 1160773 . - . ID=Thaps23503.2;Parent=Thaps23503;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1160867 1161145 . - 0 ID=Thaps23503;Parent=Thaps23503;rank=1 chr7 . exon 1160867 1161145 . - . ID=Thaps23503.1;Parent=Thaps23503;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1157691 1159346 . + . ID=Thaps269258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN85];external_name=Thaps269258;logic_name=jgi_thaps3 chr7 ensembl transcript 1157691 1159346 . + . ID=Thaps269258;Parent=Thaps269258;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1157691 1159346 . + 0 ID=Thaps269258;Parent=Thaps269258;rank=1 chr7 . exon 1157691 1159346 . + . ID=Thaps269258.1;Parent=Thaps269258;constitutive=1;rank=1 chr7 . exon 1156107 1156794 . - . ID=Thaps7056.3;Parent=Thaps7056;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . exon 1156859 1156905 . - . ID=Thaps7056.2;Parent=Thaps7056;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 1157020 1157105 . - . ID=Thaps7056.1;Parent=Thaps7056;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1161462 1162710 . - . ID=Thaps7059;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN87];external_name=Thaps7059;logic_name=jgi_thaps3 chr7 ensembl transcript 1161462 1162710 . - . ID=Thaps7059;Parent=Thaps7059;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1161462 1161699 . - 0 ID=Thaps7059;Parent=Thaps7059;rank=4 chr7 . exon 1161462 1161699 . - . ID=Thaps7059.4;Parent=Thaps7059;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1161850 1161948 . - 0 ID=Thaps7059;Parent=Thaps7059;rank=3 chr7 . exon 1161850 1161948 . - . ID=Thaps7059.3;Parent=Thaps7059;constitutive=1;rank=3 chr7 . CDS 1162061 1162356 . - 0 ID=Thaps7059;Parent=Thaps7059;rank=2 chr7 . exon 1162061 1162356 . - . ID=Thaps7059.2;Parent=Thaps7059;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1162516 1162710 . - 0 ID=Thaps7059;Parent=Thaps7059;rank=1 chr7 . exon 1162516 1162710 . - . ID=Thaps7059.1;Parent=Thaps7059;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1163206 1163796 . + . ID=Thaps7060;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN88];external_name=Thaps7060;logic_name=jgi_thaps3 chr7 ensembl transcript 1163206 1163796 . + . ID=Thaps7060;Parent=Thaps7060;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1163206 1163796 . + 0 ID=Thaps7060;Parent=Thaps7060;rank=1 chr7 . exon 1163206 1163796 . + . ID=Thaps7060.1;Parent=Thaps7060;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1168352 1169332 . - . ID=Thaps23504;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN90];external_name=Thaps23504;logic_name=jgi_thaps3 chr7 ensembl transcript 1168352 1169332 . - . ID=Thaps23504;Parent=Thaps23504;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1168352 1169332 . - 0 ID=Thaps23504;Parent=Thaps23504;rank=1 chr7 . exon 1168352 1169332 . - . ID=Thaps23504.1;Parent=Thaps23504;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1169875 1170661 . - . ID=Thaps23505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN91];external_name=Thaps23505;logic_name=jgi_thaps3 chr7 ensembl transcript 1169875 1170661 . - . ID=Thaps23505;Parent=Thaps23505;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1169875 1169991 . - 0 ID=Thaps23505;Parent=Thaps23505;rank=4 chr7 . exon 1169875 1169991 . - . ID=Thaps23505.4;Parent=Thaps23505;constitutive=1;rank=4 chr7 . CDS 1170080 1170261 . - 0 ID=Thaps23505;Parent=Thaps23505;rank=3 chr7 . exon 1170080 1170261 . - . ID=Thaps23505.3;Parent=Thaps23505;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1170361 1170534 . - 0 ID=Thaps23505;Parent=Thaps23505;rank=2 chr7 . exon 1170361 1170534 . - . ID=Thaps23505.2;Parent=Thaps23505;constitutive=1;rank=2 chr7 . CDS 1170622 1170661 . - 0 ID=Thaps23505;Parent=Thaps23505;rank=1 chr7 . exon 1170622 1170661 . - . ID=Thaps23505.1;Parent=Thaps23505;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1171391 1172669 . - . ID=Thaps35712;biotype=protein_coding;description=Phosphoglycerate kinase [Source:UniProtKB/TrEMBL%3BAcc:B5YN92];external_name=Thaps35712;logic_name=jgi_thaps3 chr7 ensembl transcript 1171391 1172669 . - . ID=Thaps35712;Parent=Thaps35712;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1171391 1171640 . - 0 ID=Thaps35712;Parent=Thaps35712;rank=2 chr7 . exon 1171391 1171640 . - . ID=Thaps35712.2;Parent=Thaps35712;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1171717 1172669 . - 0 ID=Thaps35712;Parent=Thaps35712;rank=1 chr7 . exon 1171717 1172669 . - . ID=Thaps35712.1;Parent=Thaps35712;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1165973 1168169 . + . ID=Thaps7061;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN89];external_name=Thaps7061;logic_name=jgi_thaps3 chr7 ensembl transcript 1165973 1168169 . + . ID=Thaps7061;Parent=Thaps7061;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1165973 1166036 . + 0 ID=Thaps7061;Parent=Thaps7061;rank=1 chr7 . exon 1165973 1166036 . + . ID=Thaps7061.1;Parent=Thaps7061;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1166357 1167560 . + 0 ID=Thaps7061;Parent=Thaps7061;rank=2 chr7 . exon 1166357 1167560 . + . ID=Thaps7061.2;Parent=Thaps7061;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1167612 1167738 . + 0 ID=Thaps7061;Parent=Thaps7061;rank=3 chr7 . exon 1167612 1167738 . + . ID=Thaps7061.3;Parent=Thaps7061;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1167807 1168169 . + 0 ID=Thaps7061;Parent=Thaps7061;rank=4 chr7 . exon 1167807 1168169 . + . ID=Thaps7061.4;Parent=Thaps7061;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 1174714 1178574 . - . ID=Thaps7066;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN93];external_name=Thaps7066;logic_name=jgi_thaps3 chr7 ensembl transcript 1174714 1178574 . - . ID=Thaps7066;Parent=Thaps7066;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1174714 1175202 . - 0 ID=Thaps7066;Parent=Thaps7066;rank=5 chr7 . exon 1174714 1175202 . - . ID=Thaps7066.5;Parent=Thaps7066;constitutive=1;rank=5 chr7 . CDS 1175288 1176180 . - 0 ID=Thaps7066;Parent=Thaps7066;rank=4 chr7 . exon 1175288 1176180 . - . ID=Thaps7066.4;Parent=Thaps7066;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1176220 1176904 . - 0 ID=Thaps7066;Parent=Thaps7066;rank=3 chr7 . CDS 1176958 1177055 . - 0 ID=Thaps7066;Parent=Thaps7066;rank=2 chr7 . CDS 1177134 1178574 . - 0 ID=Thaps7066;Parent=Thaps7066;rank=1 chr7 . repeat_region 1184960 1185005 . ? . description=trf chr7 ensembl protein_coding_gene 1182182 1183933 . + . ID=Thaps23507;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN95];external_name=Thaps23507;logic_name=jgi_thaps3 chr7 ensembl transcript 1182182 1183933 . + . ID=Thaps23507;Parent=Thaps23507;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1182182 1183933 . + 0 ID=Thaps23507;Parent=Thaps23507;rank=1 chr7 . exon 1182182 1183933 . + . ID=Thaps23507.1;Parent=Thaps23507;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1179753 1180272 . - . ID=Thaps263212;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN94];external_name=Thaps263212;logic_name=jgi_thaps3 chr7 ensembl transcript 1179753 1180272 . - . ID=Thaps263212;Parent=Thaps263212;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1179753 1180272 . - 0 ID=Thaps263212;Parent=Thaps263212;rank=1 chr7 . exon 1179753 1180272 . - . ID=Thaps263212.1;Parent=Thaps263212;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . exon 1176220 1176904 . - . ID=Thaps7066.3;Parent=Thaps7066;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . exon 1176958 1177055 . - . ID=Thaps7066.2;Parent=Thaps7066;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 1177134 1178574 . - . ID=Thaps7066.1;Parent=Thaps7066;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1191648 1193585 . - . ID=Thaps23509;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN98];external_name=Thaps23509;logic_name=jgi_thaps3 chr7 ensembl transcript 1191648 1193585 . - . ID=Thaps23509;Parent=Thaps23509;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1191648 1193585 . - 0 ID=Thaps23509;Parent=Thaps23509;rank=1 chr7 . exon 1191648 1193585 . - . ID=Thaps23509.1;Parent=Thaps23509;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1193890 1196886 . - . ID=Thaps23510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN99];external_name=Thaps23510;logic_name=jgi_thaps3 chr7 ensembl transcript 1193890 1196886 . - . ID=Thaps23510;Parent=Thaps23510;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1193890 1196886 . - 0 ID=Thaps23510;Parent=Thaps23510;rank=1 chr7 . exon 1193890 1196886 . - . ID=Thaps23510.1;Parent=Thaps23510;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1186059 1186654 . + . ID=Thaps263213;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN96];external_name=Thaps263213;logic_name=jgi_thaps3 chr7 ensembl transcript 1186059 1186654 . + . ID=Thaps263213;Parent=Thaps263213;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1186059 1186537 . + 0 ID=Thaps263213;Parent=Thaps263213;rank=1 chr7 . exon 1186059 1186537 . + . ID=Thaps263213.1;Parent=Thaps263213;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1186629 1186654 . + 0 ID=Thaps263213;Parent=Thaps263213;rank=2 chr7 . exon 1186629 1186654 . + . ID=Thaps263213.2;Parent=Thaps263213;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 1187080 1189482 . - . ID=Thaps7070;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YN97];external_name=Thaps7070;logic_name=jgi_thaps3 chr7 ensembl transcript 1187080 1189482 . - . ID=Thaps7070;Parent=Thaps7070;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1187080 1189482 . - 0 ID=Thaps7070;Parent=Thaps7070;rank=1 chr7 . exon 1187080 1189482 . - . ID=Thaps7070.1;Parent=Thaps7070;constitutive=1;rank=1 chr7 . repeat_region 1200071 1200091 . ? . description=trf chr7 . repeat_region 1203481 1203517 . ? . description=trf chr7 ensembl protein_coding_gene 1200268 1201137 . + . ID=Thaps16607;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNA1];external_name=Thaps16607;logic_name=jgi_thaps3 chr7 ensembl transcript 1200268 1201137 . + . ID=Thaps16607;Parent=Thaps16607;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1200268 1200821 . + 0 ID=Thaps16607;Parent=Thaps16607;rank=1 chr7 . exon 1200268 1200821 . + . ID=Thaps16607.1;Parent=Thaps16607;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1200909 1201137 . + 0 ID=Thaps16607;Parent=Thaps16607;rank=2 chr7 . exon 1200909 1201137 . + . ID=Thaps16607.2;Parent=Thaps16607;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 1197254 1199704 . + . ID=Thaps23511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNA0];external_name=Thaps23511;logic_name=jgi_thaps3 chr7 ensembl transcript 1197254 1199704 . + . ID=Thaps23511;Parent=Thaps23511;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1197254 1199704 . + 0 ID=Thaps23511;Parent=Thaps23511;rank=1 chr7 . exon 1197254 1199704 . + . ID=Thaps23511.1;Parent=Thaps23511;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1202121 1203833 . - . ID=Thaps7076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNA2];external_name=Thaps7076;logic_name=jgi_thaps3 chr7 ensembl transcript 1202121 1203833 . - . ID=Thaps7076;Parent=Thaps7076;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1202121 1202889 . - 0 ID=Thaps7076;Parent=Thaps7076;rank=3 chr7 . exon 1202121 1202889 . - . ID=Thaps7076.3;Parent=Thaps7076;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1202997 1203546 . - 0 ID=Thaps7076;Parent=Thaps7076;rank=2 chr7 . exon 1202997 1203546 . - . ID=Thaps7076.2;Parent=Thaps7076;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1203674 1203833 . - 0 ID=Thaps7076;Parent=Thaps7076;rank=1 chr7 . exon 1203674 1203833 . - . ID=Thaps7076.1;Parent=Thaps7076;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1209312 1213136 . - . ID=Thaps23513;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNA4];external_name=Thaps23513;logic_name=jgi_thaps3 chr7 ensembl transcript 1209312 1213136 . - . ID=Thaps23513;Parent=Thaps23513;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1209312 1213136 . - 0 ID=Thaps23513;Parent=Thaps23513;rank=1 chr7 . exon 1209312 1213136 . - . ID=Thaps23513.1;Parent=Thaps23513;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1214696 1216857 . - . ID=Thaps23514;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNA6];external_name=Thaps23514;logic_name=jgi_thaps3 chr7 ensembl transcript 1214696 1216857 . - . ID=Thaps23514;Parent=Thaps23514;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1214696 1216164 . - 0 ID=Thaps23514;Parent=Thaps23514;rank=3 chr7 . exon 1214696 1216164 . - . ID=Thaps23514.3;Parent=Thaps23514;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1216244 1216477 . - 0 ID=Thaps23514;Parent=Thaps23514;rank=2 chr7 . CDS 1216557 1216857 . - 0 ID=Thaps23514;Parent=Thaps23514;rank=1 chr7 ensembl protein_coding_gene 1208545 1209173 . + . ID=Thaps263215;biotype=protein_coding;description=Protein scp/tpx-1/ag5/pr-1/sc7 domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNA3];external_name=Thaps263215;logic_name=jgi_thaps3 chr7 ensembl transcript 1208545 1209173 . + . ID=Thaps263215;Parent=Thaps263215;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1208545 1209173 . + 0 ID=Thaps263215;Parent=Thaps263215;rank=1 chr7 . exon 1208545 1209173 . + . ID=Thaps263215.1;Parent=Thaps263215;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1213380 1214628 . + . ID=Thaps7079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNA5];external_name=Thaps7079;logic_name=jgi_thaps3 chr7 ensembl transcript 1213380 1214628 . + . ID=Thaps7079;Parent=Thaps7079;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1213380 1213436 . + 0 ID=Thaps7079;Parent=Thaps7079;rank=1 chr7 . exon 1213380 1213436 . + . ID=Thaps7079.1;Parent=Thaps7079;constitutive=1;rank=1 chr7 . CDS 1213540 1214628 . + 0 ID=Thaps7079;Parent=Thaps7079;rank=2 chr7 . exon 1213540 1214628 . + . ID=Thaps7079.2;Parent=Thaps7079;constitutive=1;rank=2 chr7 . repeat_region 1217106 1217118 . ? . description=dust chr7 . repeat_region 1218672 1218730 . ? . description=dust chr7 . repeat_region 1220053 1220075 . ? . description=trf chr7 . repeat_region 1220053 1220075 . ? . description=dust chr7 . exon 1216244 1216477 . - . ID=Thaps23514.2;Parent=Thaps23514;constitutive=1;rank=2 chr7 . exon 1216557 1216857 . - . ID=Thaps23514.1;Parent=Thaps23514;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1223665 1226828 . + . ID=Thaps269261;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNA9];external_name=Thaps269261;logic_name=jgi_thaps3 chr7 ensembl transcript 1223665 1226828 . + . ID=Thaps269261;Parent=Thaps269261;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1223665 1223723 . + 0 ID=Thaps269261;Parent=Thaps269261;rank=1 chr7 . exon 1223665 1223723 . + . ID=Thaps269261.1;Parent=Thaps269261;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1223976 1224081 . + 0 ID=Thaps269261;Parent=Thaps269261;rank=2 chr7 . exon 1223976 1224081 . + . ID=Thaps269261.2;Parent=Thaps269261;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1225093 1225299 . + 0 ID=Thaps269261;Parent=Thaps269261;rank=3 chr7 . exon 1225093 1225299 . + . ID=Thaps269261.3;Parent=Thaps269261;constitutive=1;rank=3 chr7 . CDS 1225725 1225937 . + 0 ID=Thaps269261;Parent=Thaps269261;rank=4 chr7 . CDS 1226190 1226521 . + 0 ID=Thaps269261;Parent=Thaps269261;rank=5 chr7 . CDS 1226648 1226828 . + 0 ID=Thaps269261;Parent=Thaps269261;rank=6 chr7 ensembl protein_coding_gene 1218920 1219918 . + . ID=Thaps35360;biotype=protein_coding;description=Autophagy-related protein 3 [Source:UniProtKB/TrEMBL%3BAcc:B5YNA8];external_name=Thaps35360;logic_name=jgi_thaps3 chr7 ensembl transcript 1218920 1219918 . + . ID=Thaps35360;Parent=Thaps35360;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1218920 1219279 . + 0 ID=Thaps35360;Parent=Thaps35360;rank=1 chr7 . exon 1218920 1219279 . + . ID=Thaps35360.1;Parent=Thaps35360;constitutive=1;rank=1 chr7 . CDS 1219337 1219918 . + 0 ID=Thaps35360;Parent=Thaps35360;rank=2 chr7 . exon 1219337 1219918 . + . ID=Thaps35360.2;Parent=Thaps35360;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1217240 1218595 . - . ID=Thaps7081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNA7];external_name=Thaps7081;logic_name=jgi_thaps3 chr7 ensembl transcript 1217240 1218595 . - . ID=Thaps7081;Parent=Thaps7081;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1217240 1218595 . - 0 ID=Thaps7081;Parent=Thaps7081;rank=1 chr7 . exon 1217240 1218595 . - . ID=Thaps7081.1;Parent=Thaps7081;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1230961 1232337 . + . ID=Thaps23516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB2];external_name=Thaps23516;logic_name=jgi_thaps3 chr7 ensembl transcript 1230961 1232337 . + . ID=Thaps23516;Parent=Thaps23516;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1230961 1231430 . + 0 ID=Thaps23516;Parent=Thaps23516;rank=1 chr7 . exon 1230961 1231430 . + . ID=Thaps23516.1;Parent=Thaps23516;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1231521 1232337 . + 0 ID=Thaps23516;Parent=Thaps23516;rank=2 chr7 . exon 1231521 1232337 . + . ID=Thaps23516.2;Parent=Thaps23516;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 1234914 1236860 . - . ID=Thaps23517;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB4];external_name=Thaps23517;logic_name=jgi_thaps3 chr7 ensembl transcript 1234914 1236860 . - . ID=Thaps23517;Parent=Thaps23517;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1234914 1235431 . - 0 ID=Thaps23517;Parent=Thaps23517;rank=2 chr7 . exon 1234914 1235431 . - . ID=Thaps23517.2;Parent=Thaps23517;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1235519 1236860 . - 0 ID=Thaps23517;Parent=Thaps23517;rank=1 chr7 . exon 1225725 1225937 . + . ID=Thaps269261.4;Parent=Thaps269261;constitutive=1;rank=4 chr7 . exon 1226190 1226521 . + . ID=Thaps269261.5;Parent=Thaps269261;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . exon 1226648 1226828 . + . ID=Thaps269261.6;Parent=Thaps269261;constitutive=1;ensembl_end_phase=1;rank=6 chr7 ensembl protein_coding_gene 1226922 1228757 . - . ID=Thaps7084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB0];external_name=Thaps7084;logic_name=jgi_thaps3 chr7 ensembl transcript 1226922 1228757 . - . ID=Thaps7084;Parent=Thaps7084;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1226922 1228491 . - 0 ID=Thaps7084;Parent=Thaps7084;rank=2 chr7 . exon 1226922 1228491 . - . ID=Thaps7084.2;Parent=Thaps7084;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1228555 1228757 . - 0 ID=Thaps7084;Parent=Thaps7084;rank=1 chr7 . exon 1228555 1228757 . - . ID=Thaps7084.1;Parent=Thaps7084;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1229022 1230749 . - . ID=Thaps7085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB1];external_name=Thaps7085;logic_name=jgi_thaps3 chr7 ensembl transcript 1229022 1230749 . - . ID=Thaps7085;Parent=Thaps7085;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1229022 1229722 . - 0 ID=Thaps7085;Parent=Thaps7085;rank=2 chr7 . exon 1229022 1229722 . - . ID=Thaps7085.2;Parent=Thaps7085;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1229819 1230749 . - 0 ID=Thaps7085;Parent=Thaps7085;rank=1 chr7 . exon 1229819 1230749 . - . ID=Thaps7085.1;Parent=Thaps7085;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1232669 1233277 . - . ID=Thaps7087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB3];external_name=Thaps7087;logic_name=jgi_thaps3 chr7 ensembl transcript 1232669 1233277 . - . ID=Thaps7087;Parent=Thaps7087;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1232669 1232884 . - 0 ID=Thaps7087;Parent=Thaps7087;rank=3 chr7 . exon 1232669 1232884 . - . ID=Thaps7087.3;Parent=Thaps7087;constitutive=1;rank=3 chr7 . CDS 1232973 1233076 . - 0 ID=Thaps7087;Parent=Thaps7087;rank=2 chr7 . exon 1232973 1233076 . - . ID=Thaps7087.2;Parent=Thaps7087;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1233232 1233277 . - 0 ID=Thaps7087;Parent=Thaps7087;rank=1 chr7 . exon 1233232 1233277 . - . ID=Thaps7087.1;Parent=Thaps7087;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 1237912 1237942 . ? . description=dust chr7 . repeat_region 1239285 1239327 . ? . description=trf chr7 . repeat_region 1240136 1240374 . ? . description=trf chr7 . repeat_region 1243511 1243726 . ? . description=trf chr7 . exon 1235519 1236860 . - . ID=Thaps23517.1;Parent=Thaps23517;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1237160 1237912 . + . ID=Thaps7089;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB5];external_name=Thaps7089;logic_name=jgi_thaps3 chr7 ensembl transcript 1237160 1237912 . + . ID=Thaps7089;Parent=Thaps7089;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1237160 1237912 . + 0 ID=Thaps7089;Parent=Thaps7089;rank=1 chr7 . exon 1237160 1237912 . + . ID=Thaps7089.1;Parent=Thaps7089;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1238853 1241311 . + . ID=Thaps7090;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB6];external_name=Thaps7090;logic_name=jgi_thaps3 chr7 ensembl transcript 1238853 1241311 . + . ID=Thaps7090;Parent=Thaps7090;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1238853 1239273 . + 0 ID=Thaps7090;Parent=Thaps7090;rank=1 chr7 . exon 1238853 1239273 . + . ID=Thaps7090.1;Parent=Thaps7090;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1239370 1239471 . + 0 ID=Thaps7090;Parent=Thaps7090;rank=2 chr7 . exon 1239370 1239471 . + . ID=Thaps7090.2;Parent=Thaps7090;constitutive=1;rank=2 chr7 . CDS 1239593 1240612 . + 0 ID=Thaps7090;Parent=Thaps7090;rank=3 chr7 . exon 1239593 1240612 . + . ID=Thaps7090.3;Parent=Thaps7090;constitutive=1;rank=3 chr7 . CDS 1240693 1241159 . + 0 ID=Thaps7090;Parent=Thaps7090;rank=4 chr7 . exon 1240693 1241159 . + . ID=Thaps7090.4;Parent=Thaps7090;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1241297 1241311 . + 0 ID=Thaps7090;Parent=Thaps7090;rank=5 chr7 . exon 1241297 1241311 . + . ID=Thaps7090.5;Parent=Thaps7090;constitutive=1;rank=5 chr7 ensembl protein_coding_gene 1241542 1242140 . - . ID=Thaps7091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB7];external_name=Thaps7091;logic_name=jgi_thaps3 chr7 ensembl transcript 1241542 1242140 . - . ID=Thaps7091;Parent=Thaps7091;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1241542 1241901 . - 0 ID=Thaps7091;Parent=Thaps7091;rank=3 chr7 . exon 1241542 1241901 . - . ID=Thaps7091.3;Parent=Thaps7091;constitutive=1;rank=3 chr7 . CDS 1241980 1242028 . - 0 ID=Thaps7091;Parent=Thaps7091;rank=2 chr7 . exon 1241980 1242028 . - . ID=Thaps7091.2;Parent=Thaps7091;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1242058 1242140 . - 0 ID=Thaps7091;Parent=Thaps7091;rank=1 chr7 . exon 1242058 1242140 . - . ID=Thaps7091.1;Parent=Thaps7091;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1242708 1245602 . + . ID=Thaps7092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB8];external_name=Thaps7092;logic_name=jgi_thaps3 chr7 ensembl transcript 1242708 1245602 . + . ID=Thaps7092;Parent=Thaps7092;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1242708 1243290 . + 0 ID=Thaps7092;Parent=Thaps7092;rank=1 chr7 . exon 1242708 1243290 . + . ID=Thaps7092.1;Parent=Thaps7092;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1243377 1243959 . + 0 ID=Thaps7092;Parent=Thaps7092;rank=2 chr7 . exon 1243377 1243959 . + . ID=Thaps7092.2;Parent=Thaps7092;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1244045 1245602 . + 0 ID=Thaps7092;Parent=Thaps7092;rank=3 chr7 . exon 1244045 1245602 . + . ID=Thaps7092.3;Parent=Thaps7092;constitutive=1;ensembl_end_phase=1;rank=3 chr7 ensembl protein_coding_gene 1255039 1259415 . - . ID=Thaps23519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNC2];external_name=Thaps23519;logic_name=jgi_thaps3 chr7 ensembl transcript 1255039 1259415 . - . ID=Thaps23519;Parent=Thaps23519;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1255039 1255332 . - 0 ID=Thaps23519;Parent=Thaps23519;rank=4 chr7 . exon 1255039 1255332 . - . ID=Thaps23519.4;Parent=Thaps23519;constitutive=1;rank=4 chr7 . CDS 1255412 1257547 . - 0 ID=Thaps23519;Parent=Thaps23519;rank=3 chr7 . CDS 1257636 1258353 . - 0 ID=Thaps23519;Parent=Thaps23519;rank=2 chr7 . CDS 1258457 1259415 . - 0 ID=Thaps23519;Parent=Thaps23519;rank=1 chr7 ensembl protein_coding_gene 1250702 1252155 . - . ID=Thaps263219;biotype=protein_coding;description=Possible transporter [Source:UniProtKB/TrEMBL%3BAcc:B5YNC1];external_name=Thaps263219;logic_name=jgi_thaps3 chr7 ensembl transcript 1250702 1252155 . - . ID=Thaps263219;Parent=Thaps263219;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1250702 1251277 . - 0 ID=Thaps263219;Parent=Thaps263219;rank=5 chr7 . exon 1250702 1251277 . - . ID=Thaps263219.5;Parent=Thaps263219;constitutive=1;rank=5 chr7 . CDS 1251302 1251530 . - 0 ID=Thaps263219;Parent=Thaps263219;rank=4 chr7 . exon 1251302 1251530 . - . ID=Thaps263219.4;Parent=Thaps263219;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1251612 1251730 . - 0 ID=Thaps263219;Parent=Thaps263219;rank=3 chr7 . exon 1251612 1251730 . - . ID=Thaps263219.3;Parent=Thaps263219;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1251809 1251873 . - 0 ID=Thaps263219;Parent=Thaps263219;rank=2 chr7 . exon 1251809 1251873 . - . ID=Thaps263219.2;Parent=Thaps263219;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1251980 1252155 . - 0 ID=Thaps263219;Parent=Thaps263219;rank=1 chr7 . exon 1251980 1252155 . - . ID=Thaps263219.1;Parent=Thaps263219;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1245764 1248603 . - . ID=Thaps7093;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNB9];external_name=Thaps7093;logic_name=jgi_thaps3 chr7 ensembl transcript 1245764 1248603 . - . ID=Thaps7093;Parent=Thaps7093;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1245764 1246684 . - 0 ID=Thaps7093;Parent=Thaps7093;rank=4 chr7 . exon 1245764 1246684 . - . ID=Thaps7093.4;Parent=Thaps7093;constitutive=1;rank=4 chr7 . CDS 1246770 1246866 . - 0 ID=Thaps7093;Parent=Thaps7093;rank=3 chr7 . exon 1246770 1246866 . - . ID=Thaps7093.3;Parent=Thaps7093;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1246961 1247962 . - 0 ID=Thaps7093;Parent=Thaps7093;rank=2 chr7 . exon 1246961 1247962 . - . ID=Thaps7093.2;Parent=Thaps7093;constitutive=1;rank=2 chr7 . CDS 1248041 1248603 . - 0 ID=Thaps7093;Parent=Thaps7093;rank=1 chr7 . exon 1248041 1248603 . - . ID=Thaps7093.1;Parent=Thaps7093;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1248863 1250611 . + . ID=Thaps7094;biotype=protein_coding;description=Phytoene dehydrogenase%2C phytoene desaturase and carotenoid isomerase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNC0];external_name=Thaps7094;logic_name=jgi_thaps3 chr7 ensembl transcript 1248863 1250611 . + . ID=Thaps7094;Parent=Thaps7094;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1248863 1250611 . + 0 ID=Thaps7094;Parent=Thaps7094;rank=1 chr7 . exon 1248863 1250611 . + . ID=Thaps7094.1;Parent=Thaps7094;constitutive=1;rank=1 chr7 . repeat_region 1259087 1259148 . ? . description=dust chr7 . repeat_region 1259088 1259117 . ? . description=trf chr7 . repeat_region 1259116 1259144 . ? . description=trf chr7 . repeat_region 1259679 1259726 . ? . description=dust chr7 . exon 1255412 1257547 . - . ID=Thaps23519.3;Parent=Thaps23519;constitutive=1;rank=3 chr7 . exon 1257636 1258353 . - . ID=Thaps23519.2;Parent=Thaps23519;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 1258457 1259415 . - . ID=Thaps23519.1;Parent=Thaps23519;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1261302 1274096 . + . ID=Thaps269263;biotype=protein_coding;description=Cytoplasmic dynein heavy chain-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNC3];external_name=DHC1_2;logic_name=jgi_thaps3 chr7 ensembl transcript 1261302 1274096 . + . ID=Thaps269263;Parent=Thaps269263;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1261302 1262408 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=1 chr7 . exon 1261302 1262408 . + . ID=Thaps269263.1;Parent=Thaps269263;constitutive=1;rank=1 chr7 . CDS 1262497 1263115 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=2 chr7 . exon 1262497 1263115 . + . ID=Thaps269263.2;Parent=Thaps269263;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1263209 1263323 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=3 chr7 . exon 1263209 1263323 . + . ID=Thaps269263.3;Parent=Thaps269263;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1263363 1265579 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=4 chr7 . exon 1263363 1265579 . + . ID=Thaps269263.4;Parent=Thaps269263;constitutive=1;rank=4 chr7 . CDS 1265660 1266243 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=5 chr7 . CDS 1266322 1266756 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=6 chr7 . CDS 1266833 1266925 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=7 chr7 . CDS 1267005 1269948 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=8 chr7 . CDS 1270036 1270637 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=9 chr7 . CDS 1270665 1271312 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=10 chr7 . CDS 1271395 1274096 . + 0 ID=Thaps269263;Parent=Thaps269263;rank=11 chr7 . exon 1265660 1266243 . + . ID=Thaps269263.5;Parent=Thaps269263;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . exon 1266322 1266756 . + . ID=Thaps269263.6;Parent=Thaps269263;constitutive=1;rank=6 chr7 . exon 1266833 1266925 . + . ID=Thaps269263.7;Parent=Thaps269263;constitutive=1;rank=7 chr7 . exon 1267005 1269948 . + . ID=Thaps269263.8;Parent=Thaps269263;constitutive=1;ensembl_end_phase=1;rank=8 chr7 . exon 1270036 1270637 . + . ID=Thaps269263.9;Parent=Thaps269263;constitutive=1;ensembl_end_phase=2;rank=9 chr7 . exon 1270665 1271312 . + . ID=Thaps269263.10;Parent=Thaps269263;constitutive=1;rank=10 chr7 . exon 1271395 1274096 . + . ID=Thaps269263.11;Parent=Thaps269263;constitutive=1;ensembl_end_phase=2;rank=11 chr7 ensembl protein_coding_gene 1274379 1277670 . + . ID=Thaps269264;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNC4];external_name=Thaps269264;logic_name=jgi_thaps3 chr7 ensembl transcript 1274379 1277670 . + . ID=Thaps269264;Parent=Thaps269264;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1274379 1275801 . + 0 ID=Thaps269264;Parent=Thaps269264;rank=1 chr7 . exon 1274379 1275801 . + . ID=Thaps269264.1;Parent=Thaps269264;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1275927 1276194 . + 0 ID=Thaps269264;Parent=Thaps269264;rank=2 chr7 . CDS 1276294 1277466 . + 0 ID=Thaps269264;Parent=Thaps269264;rank=3 chr7 . CDS 1277550 1277670 . + 0 ID=Thaps269264;Parent=Thaps269264;rank=4 chr7 . repeat_region 1282461 1282531 . ? . description=dust chr7 . repeat_region 1282461 1282539 . - . description=Harbinger2N_TP chr7 . repeat_region 1282475 1282531 . ? . description=trf chr7 ensembl protein_coding_gene 1277843 1281782 . - . ID=Thaps23521;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNC5];external_name=Thaps23521;logic_name=jgi_thaps3 chr7 ensembl transcript 1277843 1281782 . - . ID=Thaps23521;Parent=Thaps23521;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1277843 1279296 . - 0 ID=Thaps23521;Parent=Thaps23521;rank=4 chr7 . exon 1277843 1279296 . - . ID=Thaps23521.4;Parent=Thaps23521;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1279374 1280816 . - 0 ID=Thaps23521;Parent=Thaps23521;rank=3 chr7 . exon 1279374 1280816 . - . ID=Thaps23521.3;Parent=Thaps23521;constitutive=1;rank=3 chr7 . CDS 1280950 1281222 . - 0 ID=Thaps23521;Parent=Thaps23521;rank=2 chr7 . exon 1280950 1281222 . - . ID=Thaps23521.2;Parent=Thaps23521;constitutive=1;rank=2 chr7 . CDS 1281371 1281782 . - 0 ID=Thaps23521;Parent=Thaps23521;rank=1 chr7 . exon 1281371 1281782 . - . ID=Thaps23521.1;Parent=Thaps23521;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . exon 1275927 1276194 . + . ID=Thaps269264.2;Parent=Thaps269264;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 1276294 1277466 . + . ID=Thaps269264.3;Parent=Thaps269264;constitutive=1;rank=3 chr7 . exon 1277550 1277670 . + . ID=Thaps269264.4;Parent=Thaps269264;constitutive=1;ensembl_end_phase=1;rank=4 chr7 ensembl protein_coding_gene 1283686 1288017 . - . ID=Thaps7100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNC6];external_name=Thaps7100;logic_name=jgi_thaps3 chr7 ensembl transcript 1283686 1288017 . - . ID=Thaps7100;Parent=Thaps7100;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1283686 1284801 . - 0 ID=Thaps7100;Parent=Thaps7100;rank=4 chr7 . exon 1283686 1284801 . - . ID=Thaps7100.4;Parent=Thaps7100;constitutive=1;rank=4 chr7 . CDS 1284904 1285557 . - 0 ID=Thaps7100;Parent=Thaps7100;rank=3 chr7 . exon 1284904 1285557 . - . ID=Thaps7100.3;Parent=Thaps7100;constitutive=1;rank=3 chr7 . CDS 1285655 1286328 . - 0 ID=Thaps7100;Parent=Thaps7100;rank=2 chr7 . CDS 1286424 1288017 . - 0 ID=Thaps7100;Parent=Thaps7100;rank=1 chr7 ensembl protein_coding_gene 1288393 1290616 . + . ID=Thaps23522;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNC7];external_name=Thaps23522;logic_name=jgi_thaps3 chr7 ensembl transcript 1288393 1290616 . + . ID=Thaps23522;Parent=Thaps23522;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1288393 1288496 . + 0 ID=Thaps23522;Parent=Thaps23522;rank=1 chr7 . exon 1288393 1288496 . + . ID=Thaps23522.1;Parent=Thaps23522;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1288526 1289299 . + 0 ID=Thaps23522;Parent=Thaps23522;rank=2 chr7 . exon 1288526 1289299 . + . ID=Thaps23522.2;Parent=Thaps23522;constitutive=1;rank=2 chr7 . CDS 1289347 1290616 . + 0 ID=Thaps23522;Parent=Thaps23522;rank=3 chr7 . exon 1289347 1290616 . + . ID=Thaps23522.3;Parent=Thaps23522;constitutive=1;ensembl_end_phase=1;rank=3 chr7 ensembl protein_coding_gene 1293955 1294560 . - . ID=Thaps35464;biotype=protein_coding;description=MutY family most like Nth1 [Source:UniProtKB/TrEMBL%3BAcc:B5YND0];external_name=Thaps35464;logic_name=jgi_thaps3 chr7 ensembl transcript 1293955 1294560 . - . ID=Thaps35464;Parent=Thaps35464;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1293955 1294560 . - 0 ID=Thaps35464;Parent=Thaps35464;rank=1 chr7 . exon 1293955 1294560 . - . ID=Thaps35464.1;Parent=Thaps35464;constitutive=1;rank=1 chr7 . exon 1285655 1286328 . - . ID=Thaps7100.2;Parent=Thaps7100;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 1286424 1288017 . - . ID=Thaps7100.1;Parent=Thaps7100;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1290765 1292012 . - . ID=Thaps7102;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNC8];external_name=Thaps7102;logic_name=jgi_thaps3 chr7 ensembl transcript 1290765 1292012 . - . ID=Thaps7102;Parent=Thaps7102;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1290765 1292012 . - 0 ID=Thaps7102;Parent=Thaps7102;rank=1 chr7 . exon 1290765 1292012 . - . ID=Thaps7102.1;Parent=Thaps7102;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1292321 1293704 . + . ID=Thaps7103;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNC9];external_name=Thaps7103;logic_name=jgi_thaps3 chr7 ensembl transcript 1292321 1293704 . + . ID=Thaps7103;Parent=Thaps7103;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1292321 1292435 . + 0 ID=Thaps7103;Parent=Thaps7103;rank=1 chr7 . exon 1292321 1292435 . + . ID=Thaps7103.1;Parent=Thaps7103;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1292547 1292699 . + 0 ID=Thaps7103;Parent=Thaps7103;rank=2 chr7 . exon 1292547 1292699 . + . ID=Thaps7103.2;Parent=Thaps7103;constitutive=1;rank=2 chr7 . CDS 1292803 1293704 . + 0 ID=Thaps7103;Parent=Thaps7103;rank=3 chr7 . exon 1292803 1293704 . + . ID=Thaps7103.3;Parent=Thaps7103;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . repeat_region 1297515 1297535 . ? . description=trf chr7 . repeat_region 1298117 1298152 . ? . description=trf chr7 . repeat_region 1298398 1298405 . ? . description=dust chr7 ensembl protein_coding_gene 1296347 1300663 . - . ID=Thaps23524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YND1];external_name=Thaps23524;logic_name=jgi_thaps3 chr7 ensembl transcript 1296347 1300663 . - . ID=Thaps23524;Parent=Thaps23524;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1296347 1296747 . - 0 ID=Thaps23524;Parent=Thaps23524;rank=2 chr7 . exon 1296347 1296747 . - . ID=Thaps23524.2;Parent=Thaps23524;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1297306 1300663 . - 0 ID=Thaps23524;Parent=Thaps23524;rank=1 chr7 . exon 1297306 1300663 . - . ID=Thaps23524.1;Parent=Thaps23524;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1303718 1305011 . - . ID=Thaps23526;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YND3];external_name=Thaps23526;logic_name=jgi_thaps3 chr7 ensembl transcript 1303718 1305011 . - . ID=Thaps23526;Parent=Thaps23526;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1303718 1303834 . - 0 ID=Thaps23526;Parent=Thaps23526;rank=3 chr7 . exon 1303718 1303834 . - . ID=Thaps23526.3;Parent=Thaps23526;constitutive=1;rank=3 chr7 . CDS 1303910 1304150 . - 0 ID=Thaps23526;Parent=Thaps23526;rank=2 chr7 . exon 1303910 1304150 . - . ID=Thaps23526.2;Parent=Thaps23526;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1304416 1305011 . - 0 ID=Thaps23526;Parent=Thaps23526;rank=1 chr7 . exon 1304416 1305011 . - . ID=Thaps23526.1;Parent=Thaps23526;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1302675 1303378 . + . ID=Thaps41372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YND2];external_name=Thaps41372;logic_name=jgi_thaps3 chr7 ensembl transcript 1302675 1303378 . + . ID=Thaps41372;Parent=Thaps41372;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1302675 1302859 . + 0 ID=Thaps41372;Parent=Thaps41372;rank=1 chr7 . exon 1302675 1302859 . + . ID=Thaps41372.1;Parent=Thaps41372;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1302949 1303024 . + 0 ID=Thaps41372;Parent=Thaps41372;rank=2 chr7 . exon 1302949 1303024 . + . ID=Thaps41372.2;Parent=Thaps41372;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1303163 1303378 . + 0 ID=Thaps41372;Parent=Thaps41372;rank=3 chr7 . exon 1303163 1303378 . + . ID=Thaps41372.3;Parent=Thaps41372;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1305407 1306010 . + . ID=Thaps23527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YND4];external_name=Thaps23527;logic_name=jgi_thaps3 chr7 ensembl transcript 1305407 1306010 . + . ID=Thaps23527;Parent=Thaps23527;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1305407 1305550 . + 0 ID=Thaps23527;Parent=Thaps23527;rank=1 chr7 . exon 1305407 1305550 . + . ID=Thaps23527.1;Parent=Thaps23527;constitutive=1;rank=1 chr7 . CDS 1305750 1306010 . + 0 ID=Thaps23527;Parent=Thaps23527;rank=2 chr7 . exon 1305750 1306010 . + . ID=Thaps23527.2;Parent=Thaps23527;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1306569 1307340 . - . ID=Thaps23528;biotype=protein_coding;description=Rab-type small GTPase [Source:UniProtKB/TrEMBL%3BAcc:B5YND5];external_name=Thaps23528;logic_name=jgi_thaps3 chr7 ensembl transcript 1306569 1307340 . - . ID=Thaps23528;Parent=Thaps23528;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1306569 1306968 . - 0 ID=Thaps23528;Parent=Thaps23528;rank=2 chr7 . exon 1306569 1306968 . - . ID=Thaps23528.2;Parent=Thaps23528;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1307093 1307340 . - 0 ID=Thaps23528;Parent=Thaps23528;rank=1 chr7 . exon 1307093 1307340 . - . ID=Thaps23528.1;Parent=Thaps23528;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1312261 1312688 . - . ID=Thaps35544;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YND9];external_name=MYB23;logic_name=jgi_thaps3 chr7 ensembl transcript 1312261 1312688 . - . ID=Thaps35544;Parent=Thaps35544;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1312261 1312478 . - 0 ID=Thaps35544;Parent=Thaps35544;rank=2 chr7 . exon 1312261 1312478 . - . ID=Thaps35544.2;Parent=Thaps35544;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1312583 1312688 . - 0 ID=Thaps35544;Parent=Thaps35544;rank=1 chr7 . exon 1312583 1312688 . - . ID=Thaps35544.1;Parent=Thaps35544;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1309632 1310360 . - . ID=Thaps35745;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YND7];external_name=Thaps35745;logic_name=jgi_thaps3 chr7 ensembl transcript 1309632 1310360 . - . ID=Thaps35745;Parent=Thaps35745;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1309632 1310360 . - 0 ID=Thaps35745;Parent=Thaps35745;rank=1 chr7 . exon 1309632 1310360 . - . ID=Thaps35745.1;Parent=Thaps35745;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1307980 1309004 . + . ID=Thaps7110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YND6];external_name=Thaps7110;logic_name=jgi_thaps3 chr7 ensembl transcript 1307980 1309004 . + . ID=Thaps7110;Parent=Thaps7110;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1307980 1308483 . + 0 ID=Thaps7110;Parent=Thaps7110;rank=1 chr7 . exon 1307980 1308483 . + . ID=Thaps7110.1;Parent=Thaps7110;constitutive=1;rank=1 chr7 . CDS 1308591 1309004 . + 0 ID=Thaps7110;Parent=Thaps7110;rank=2 chr7 . exon 1308591 1309004 . + . ID=Thaps7110.2;Parent=Thaps7110;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1310648 1312038 . + . ID=Thaps7112;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YND8];external_name=Thaps7112;logic_name=jgi_thaps3 chr7 ensembl transcript 1310648 1312038 . + . ID=Thaps7112;Parent=Thaps7112;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1310648 1310881 . + 0 ID=Thaps7112;Parent=Thaps7112;rank=1 chr7 . exon 1310648 1310881 . + . ID=Thaps7112.1;Parent=Thaps7112;constitutive=1;rank=1 chr7 . CDS 1310965 1312038 . + 0 ID=Thaps7112;Parent=Thaps7112;rank=2 chr7 . exon 1310965 1312038 . + . ID=Thaps7112.2;Parent=Thaps7112;constitutive=1;rank=2 chr7 . repeat_region 1323356 1323398 . ? . description=trf chr7 . repeat_region 1324705 1324731 . ? . description=trf chr7 . repeat_region 1324705 1324731 . ? . description=trf chr7 ensembl protein_coding_gene 1322694 1324699 . - . ID=Thaps23533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNE2];external_name=Thaps23533;logic_name=jgi_thaps3 chr7 ensembl transcript 1322694 1324699 . - . ID=Thaps23533;Parent=Thaps23533;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1322694 1323419 . - 0 ID=Thaps23533;Parent=Thaps23533;rank=2 chr7 . exon 1322694 1323419 . - . ID=Thaps23533.2;Parent=Thaps23533;constitutive=1;rank=2 chr7 . CDS 1323533 1324699 . - 0 ID=Thaps23533;Parent=Thaps23533;rank=1 chr7 . exon 1323533 1324699 . - . ID=Thaps23533.1;Parent=Thaps23533;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1321210 1322310 . + . ID=Thaps263228;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNE1];external_name=Thaps263228;logic_name=jgi_thaps3 chr7 ensembl transcript 1321210 1322310 . + . ID=Thaps263228;Parent=Thaps263228;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1321210 1322106 . + 0 ID=Thaps263228;Parent=Thaps263228;rank=1 chr7 . exon 1321210 1322106 . + . ID=Thaps263228.1;Parent=Thaps263228;constitutive=1;rank=1 chr7 . CDS 1322158 1322310 . + 0 ID=Thaps263228;Parent=Thaps263228;rank=2 chr7 . exon 1322158 1322310 . + . ID=Thaps263228.2;Parent=Thaps263228;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1318256 1318792 . - . ID=Thaps35318;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNE0];external_name=Thaps35318;logic_name=jgi_thaps3 chr7 ensembl transcript 1318256 1318792 . - . ID=Thaps35318;Parent=Thaps35318;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1318256 1318533 . - 0 ID=Thaps35318;Parent=Thaps35318;rank=2 chr7 . exon 1318256 1318533 . - . ID=Thaps35318.2;Parent=Thaps35318;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1318612 1318792 . - 0 ID=Thaps35318;Parent=Thaps35318;rank=1 chr7 . exon 1318612 1318792 . - . ID=Thaps35318.1;Parent=Thaps35318;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 1325244 1325257 . ? . description=dust chr7 . biological_region 1325524 1325526 0.999 - . logic_name=eponine chr7 . biological_region 1325603 1325608 0.999 + . logic_name=eponine chr7 ensembl protein_coding_gene 1325348 1327321 . + . ID=Thaps23534;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNE3];external_name=Thaps23534;logic_name=jgi_thaps3 chr7 ensembl transcript 1325348 1327321 . + . ID=Thaps23534;Parent=Thaps23534;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1325348 1327321 . + 0 ID=Thaps23534;Parent=Thaps23534;rank=1 chr7 . exon 1325348 1327321 . + . ID=Thaps23534.1;Parent=Thaps23534;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1327428 1329044 . - . ID=Thaps7119;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNE4];external_name=Thaps7119;logic_name=jgi_thaps3 chr7 ensembl transcript 1327428 1329044 . - . ID=Thaps7119;Parent=Thaps7119;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1327428 1329044 . - 0 ID=Thaps7119;Parent=Thaps7119;rank=1 chr7 . exon 1327428 1329044 . - . ID=Thaps7119.1;Parent=Thaps7119;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1329869 1331102 . + . ID=Thaps7120;biotype=protein_coding;description=L-aspariginase I [Source:UniProtKB/TrEMBL%3BAcc:B5YNE5];external_name=Thaps7120;logic_name=jgi_thaps3 chr7 ensembl transcript 1329869 1331102 . + . ID=Thaps7120;Parent=Thaps7120;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1329869 1330206 . + 0 ID=Thaps7120;Parent=Thaps7120;rank=1 chr7 . exon 1329869 1330206 . + . ID=Thaps7120.1;Parent=Thaps7120;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1330309 1330493 . + 0 ID=Thaps7120;Parent=Thaps7120;rank=2 chr7 . exon 1330309 1330493 . + . ID=Thaps7120.2;Parent=Thaps7120;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1330558 1331102 . + 0 ID=Thaps7120;Parent=Thaps7120;rank=3 chr7 . exon 1330558 1331102 . + . ID=Thaps7120.3;Parent=Thaps7120;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1331276 1337134 . - . ID=Thaps7121;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNE6];external_name=Thaps7121;logic_name=jgi_thaps3 chr7 ensembl transcript 1331276 1337134 . - . ID=Thaps7121;Parent=Thaps7121;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1331276 1331761 . - 0 ID=Thaps7121;Parent=Thaps7121;rank=8 chr7 . exon 1331276 1331761 . - . ID=Thaps7121.8;Parent=Thaps7121;constitutive=1;rank=8 chr7 . CDS 1331804 1331856 . - 0 ID=Thaps7121;Parent=Thaps7121;rank=7 chr7 . exon 1331804 1331856 . - . ID=Thaps7121.7;Parent=Thaps7121;constitutive=1;ensembl_end_phase=2;rank=7 chr7 . CDS 1331937 1333242 . - 0 ID=Thaps7121;Parent=Thaps7121;rank=6 chr7 . exon 1331937 1333242 . - . ID=Thaps7121.6;Parent=Thaps7121;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . CDS 1333279 1333610 . - 0 ID=Thaps7121;Parent=Thaps7121;rank=5 chr7 . exon 1333279 1333610 . - . ID=Thaps7121.5;Parent=Thaps7121;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 1333691 1334228 . - 0 ID=Thaps7121;Parent=Thaps7121;rank=4 chr7 . exon 1333691 1334228 . - . ID=Thaps7121.4;Parent=Thaps7121;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1334327 1335232 . - 0 ID=Thaps7121;Parent=Thaps7121;rank=3 chr7 . exon 1334327 1335232 . - . ID=Thaps7121.3;Parent=Thaps7121;constitutive=1;rank=3 chr7 . CDS 1335396 1336663 . - 0 ID=Thaps7121;Parent=Thaps7121;rank=2 chr7 . CDS 1336759 1337134 . - 0 ID=Thaps7121;Parent=Thaps7121;rank=1 chr7 . repeat_region 1341777 1341823 . ? . description=trf chr7 . exon 1335396 1336663 . - . ID=Thaps7121.2;Parent=Thaps7121;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 1336759 1337134 . - . ID=Thaps7121.1;Parent=Thaps7121;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1338802 1340055 . - . ID=Thaps7122;biotype=protein_coding;description=Sig2-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNE7];external_name=SIG2;logic_name=jgi_thaps3 chr7 ensembl transcript 1338802 1340055 . - . ID=Thaps7122;Parent=Thaps7122;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1338802 1339848 . - 0 ID=Thaps7122;Parent=Thaps7122;rank=2 chr7 . exon 1338802 1339848 . - . ID=Thaps7122.2;Parent=Thaps7122;constitutive=1;rank=2 chr7 . CDS 1339948 1340055 . - 0 ID=Thaps7122;Parent=Thaps7122;rank=1 chr7 . exon 1339948 1340055 . - . ID=Thaps7122.1;Parent=Thaps7122;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1340448 1341777 . - . ID=Thaps7123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNE8];external_name=Thaps7123;logic_name=jgi_thaps3 chr7 ensembl transcript 1340448 1341777 . - . ID=Thaps7123;Parent=Thaps7123;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1340448 1340668 . - 0 ID=Thaps7123;Parent=Thaps7123;rank=3 chr7 . exon 1340448 1340668 . - . ID=Thaps7123.3;Parent=Thaps7123;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1340724 1341378 . - 0 ID=Thaps7123;Parent=Thaps7123;rank=2 chr7 . exon 1340724 1341378 . - . ID=Thaps7123.2;Parent=Thaps7123;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1341478 1341777 . - 0 ID=Thaps7123;Parent=Thaps7123;rank=1 chr7 . exon 1341478 1341777 . - . ID=Thaps7123.1;Parent=Thaps7123;constitutive=1;rank=1 chr7 . repeat_region 1346209 1346241 . ? . description=dust chr7 ensembl protein_coding_gene 1348672 1350078 . + . ID=Thaps23537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNF0];external_name=Thaps23537;logic_name=jgi_thaps3 chr7 ensembl transcript 1348672 1350078 . + . ID=Thaps23537;Parent=Thaps23537;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1348672 1348982 . + 0 ID=Thaps23537;Parent=Thaps23537;rank=1 chr7 . exon 1348672 1348982 . + . ID=Thaps23537.1;Parent=Thaps23537;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1349087 1349517 . + 0 ID=Thaps23537;Parent=Thaps23537;rank=2 chr7 . exon 1349087 1349517 . + . ID=Thaps23537.2;Parent=Thaps23537;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1349615 1350078 . + 0 ID=Thaps23537;Parent=Thaps23537;rank=3 chr7 . exon 1349615 1350078 . + . ID=Thaps23537.3;Parent=Thaps23537;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1352706 1354712 . - . ID=Thaps23539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNF2];external_name=Thaps23539;logic_name=jgi_thaps3 chr7 ensembl transcript 1352706 1354712 . - . ID=Thaps23539;Parent=Thaps23539;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1352706 1354712 . - 0 ID=Thaps23539;Parent=Thaps23539;rank=1 chr7 . exon 1352706 1354712 . - . ID=Thaps23539.1;Parent=Thaps23539;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1354948 1356948 . + . ID=Thaps23540;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNF3];external_name=Thaps23540;logic_name=jgi_thaps3 chr7 ensembl transcript 1354948 1356948 . + . ID=Thaps23540;Parent=Thaps23540;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1354948 1356948 . + 0 ID=Thaps23540;Parent=Thaps23540;rank=1 chr7 . exon 1354948 1356948 . + . ID=Thaps23540.1;Parent=Thaps23540;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1350548 1352140 . - . ID=Thaps269273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNF1];external_name=Thaps269273;logic_name=jgi_thaps3 chr7 ensembl transcript 1350548 1352140 . - . ID=Thaps269273;Parent=Thaps269273;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1350548 1351086 . - 0 ID=Thaps269273;Parent=Thaps269273;rank=3 chr7 . exon 1350548 1351086 . - . ID=Thaps269273.3;Parent=Thaps269273;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1351176 1351589 . - 0 ID=Thaps269273;Parent=Thaps269273;rank=2 chr7 . exon 1351176 1351589 . - . ID=Thaps269273.2;Parent=Thaps269273;constitutive=1;rank=2 chr7 . CDS 1351696 1352140 . - 0 ID=Thaps269273;Parent=Thaps269273;rank=1 chr7 . exon 1351696 1352140 . - . ID=Thaps269273.1;Parent=Thaps269273;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1346241 1346768 . + . ID=Thaps28984;biotype=protein_coding;description=Sigma subunit of clathrin adaptor protein AP3 [Source:UniProtKB/TrEMBL%3BAcc:B5YNE9];external_name=APS3;logic_name=jgi_thaps3 chr7 ensembl transcript 1346241 1346768 . + . ID=Thaps28984;Parent=Thaps28984;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1346241 1346768 . + 0 ID=Thaps28984;Parent=Thaps28984;rank=1 chr7 . exon 1346241 1346768 . + . ID=Thaps28984.1;Parent=Thaps28984;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1360260 1361830 . + . ID=Thaps269274;biotype=protein_coding;description=Nitrate transporter [Source:UniProtKB/TrEMBL%3BAcc:B5YNF5];external_name=NRT2;logic_name=jgi_thaps3 chr7 ensembl transcript 1360260 1361830 . + . ID=Thaps269274;Parent=Thaps269274;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1360260 1360286 . + 0 ID=Thaps269274;Parent=Thaps269274;rank=1 chr7 . exon 1360260 1360286 . + . ID=Thaps269274.1;Parent=Thaps269274;constitutive=1;rank=1 chr7 . CDS 1360388 1361830 . + 0 ID=Thaps269274;Parent=Thaps269274;rank=2 chr7 . exon 1360388 1361830 . + . ID=Thaps269274.2;Parent=Thaps269274;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1362381 1362557 . - . ID=Thaps35281;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNF6];external_name=Thaps35281;logic_name=jgi_thaps3 chr7 ensembl transcript 1362381 1362557 . - . ID=Thaps35281;Parent=Thaps35281;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1362381 1362557 . - 0 ID=Thaps35281;Parent=Thaps35281;rank=1 chr7 . exon 1362381 1362557 . - . ID=Thaps35281.1;Parent=Thaps35281;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1357474 1359346 . + . ID=Thaps35518;biotype=protein_coding;description=Glycerol kinase [Source:UniProtKB/TrEMBL%3BAcc:B5YNF4];external_name=GYK;logic_name=jgi_thaps3 chr7 ensembl transcript 1357474 1359346 . + . ID=Thaps35518;Parent=Thaps35518;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1357474 1358250 . + 0 ID=Thaps35518;Parent=Thaps35518;rank=1 chr7 . exon 1357474 1358250 . + . ID=Thaps35518.1;Parent=Thaps35518;constitutive=1;rank=1 chr7 . CDS 1358296 1358752 . + 0 ID=Thaps35518;Parent=Thaps35518;rank=2 chr7 . exon 1358296 1358752 . + . ID=Thaps35518.2;Parent=Thaps35518;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1358844 1359346 . + 0 ID=Thaps35518;Parent=Thaps35518;rank=3 chr7 . exon 1358844 1359346 . + . ID=Thaps35518.3;Parent=Thaps35518;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1363962 1365750 . + . ID=Thaps7134;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNF7];external_name=Thaps7134;logic_name=jgi_thaps3 chr7 ensembl transcript 1363962 1365750 . + . ID=Thaps7134;Parent=Thaps7134;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1363962 1365200 . + 0 ID=Thaps7134;Parent=Thaps7134;rank=1 chr7 . exon 1363962 1365200 . + . ID=Thaps7134.1;Parent=Thaps7134;constitutive=1;rank=1 chr7 . CDS 1365295 1365750 . + 0 ID=Thaps7134;Parent=Thaps7134;rank=2 chr7 . repeat_region 1367029 1367037 . ? . description=dust chr7 ensembl protein_coding_gene 1370458 1374132 . + . ID=Thaps23543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNG0];external_name=Thaps23543;logic_name=jgi_thaps3 chr7 ensembl transcript 1370458 1374132 . + . ID=Thaps23543;Parent=Thaps23543;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1370458 1370666 . + 0 ID=Thaps23543;Parent=Thaps23543;rank=1 chr7 . exon 1370458 1370666 . + . ID=Thaps23543.1;Parent=Thaps23543;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1370964 1374132 . + 0 ID=Thaps23543;Parent=Thaps23543;rank=2 chr7 . exon 1370964 1374132 . + . ID=Thaps23543.2;Parent=Thaps23543;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 1365295 1365750 . + . ID=Thaps7134.2;Parent=Thaps7134;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1366361 1367014 . + . ID=Thaps7135;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNF8];external_name=Thaps7135;logic_name=jgi_thaps3 chr7 ensembl transcript 1366361 1367014 . + . ID=Thaps7135;Parent=Thaps7135;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1366361 1367014 . + 0 ID=Thaps7135;Parent=Thaps7135;rank=1 chr7 . exon 1366361 1367014 . + . ID=Thaps7135.1;Parent=Thaps7135;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1368908 1370038 . - . ID=Thaps7136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNF9];external_name=Thaps7136;logic_name=jgi_thaps3 chr7 ensembl transcript 1368908 1370038 . - . ID=Thaps7136;Parent=Thaps7136;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1368908 1370038 . - 0 ID=Thaps7136;Parent=Thaps7136;rank=1 chr7 . exon 1368908 1370038 . - . ID=Thaps7136.1;Parent=Thaps7136;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1374217 1375569 . - . ID=Thaps7138;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNG1];external_name=Thaps7138;logic_name=jgi_thaps3 chr7 ensembl transcript 1374217 1375569 . - . ID=Thaps7138;Parent=Thaps7138;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1374217 1375569 . - 0 ID=Thaps7138;Parent=Thaps7138;rank=1 chr7 . exon 1374217 1375569 . - . ID=Thaps7138.1;Parent=Thaps7138;constitutive=1;rank=1 chr7 . biological_region 1375847 1375848 0.999 + . logic_name=eponine chr7 . repeat_region 1377734 1377767 . ? . description=trf chr7 ensembl protein_coding_gene 1376227 1382706 . + . ID=Thaps35726;biotype=protein_coding;description=RNA or DNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B5YNG2];external_name=Thaps35726;logic_name=jgi_thaps3 chr7 ensembl transcript 1376227 1382706 . + . ID=Thaps35726;Parent=Thaps35726;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1376227 1376766 . + 0 ID=Thaps35726;Parent=Thaps35726;rank=1 chr7 . exon 1376227 1376766 . + . ID=Thaps35726.1;Parent=Thaps35726;constitutive=1;rank=1 chr7 . CDS 1376848 1377256 . + 0 ID=Thaps35726;Parent=Thaps35726;rank=2 chr7 . exon 1376848 1377256 . + . ID=Thaps35726.2;Parent=Thaps35726;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1377350 1377714 . + 0 ID=Thaps35726;Parent=Thaps35726;rank=3 chr7 . exon 1377350 1377714 . + . ID=Thaps35726.3;Parent=Thaps35726;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1377754 1382706 . + 0 ID=Thaps35726;Parent=Thaps35726;rank=4 chr7 . exon 1377754 1382706 . + . ID=Thaps35726.4;Parent=Thaps35726;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 1382830 1384521 . - . ID=Thaps7140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNG3];external_name=Thaps7140;logic_name=jgi_thaps3 chr7 ensembl transcript 1382830 1384521 . - . ID=Thaps7140;Parent=Thaps7140;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1382830 1384347 . - 0 ID=Thaps7140;Parent=Thaps7140;rank=2 chr7 . exon 1382830 1384347 . - . ID=Thaps7140.2;Parent=Thaps7140;constitutive=1;rank=2 chr7 . CDS 1384492 1384521 . - 0 ID=Thaps7140;Parent=Thaps7140;rank=1 chr7 . exon 1384492 1384521 . - . ID=Thaps7140.1;Parent=Thaps7140;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1387643 1390184 . - . ID=Thaps23544;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNG5];external_name=Thaps23544;logic_name=jgi_thaps3 chr7 ensembl transcript 1387643 1390184 . - . ID=Thaps23544;Parent=Thaps23544;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1387643 1387663 . - 0 ID=Thaps23544;Parent=Thaps23544;rank=2 chr7 . exon 1387643 1387663 . - . ID=Thaps23544.2;Parent=Thaps23544;constitutive=1;rank=2 chr7 . CDS 1387761 1390184 . - 0 ID=Thaps23544;Parent=Thaps23544;rank=1 chr7 . exon 1387761 1390184 . - . ID=Thaps23544.1;Parent=Thaps23544;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1394155 1394763 . - . ID=Thaps35381;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNG7];external_name=Thaps35381;logic_name=jgi_thaps3 chr7 ensembl transcript 1394155 1394763 . - . ID=Thaps35381;Parent=Thaps35381;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1394155 1394763 . - 0 ID=Thaps35381;Parent=Thaps35381;rank=1 chr7 . exon 1394155 1394763 . - . ID=Thaps35381.1;Parent=Thaps35381;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1384944 1387343 . + . ID=Thaps7141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNG4];external_name=Thaps7141;logic_name=jgi_thaps3 chr7 ensembl transcript 1384944 1387343 . + . ID=Thaps7141;Parent=Thaps7141;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1384944 1387343 . + 0 ID=Thaps7141;Parent=Thaps7141;rank=1 chr7 . exon 1384944 1387343 . + . ID=Thaps7141.1;Parent=Thaps7141;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1391189 1392559 . + . ID=Thaps7143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNG6];external_name=Thaps7143;logic_name=jgi_thaps3 chr7 ensembl transcript 1391189 1392559 . + . ID=Thaps7143;Parent=Thaps7143;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1391189 1392559 . + 0 ID=Thaps7143;Parent=Thaps7143;rank=1 chr7 . exon 1391189 1392559 . + . ID=Thaps7143.1;Parent=Thaps7143;constitutive=1;rank=1 chr7 . repeat_region 1398020 1398028 . ? . description=dust chr7 . repeat_region 1398145 1398154 . ? . description=dust chr7 . repeat_region 1399259 1399286 . ? . description=dust chr7 ensembl protein_coding_gene 1401015 1404826 . + . ID=Thaps263240;biotype=protein_coding;description=ATP-dependent helicase [Source:UniProtKB/TrEMBL%3BAcc:B5YNH0];external_name=Thaps263240;logic_name=jgi_thaps3 chr7 ensembl transcript 1401015 1404826 . + . ID=Thaps263240;Parent=Thaps263240;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1401015 1401134 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=1 chr7 . exon 1401015 1401134 . + . ID=Thaps263240.1;Parent=Thaps263240;constitutive=1;rank=1 chr7 . CDS 1401225 1401276 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=2 chr7 . exon 1401225 1401276 . + . ID=Thaps263240.2;Parent=Thaps263240;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1401324 1401348 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=3 chr7 . exon 1401324 1401348 . + . ID=Thaps263240.3;Parent=Thaps263240;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1401435 1401550 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=4 chr7 . exon 1401435 1401550 . + . ID=Thaps263240.4;Parent=Thaps263240;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1401868 1402600 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=5 chr7 . exon 1401868 1402600 . + . ID=Thaps263240.5;Parent=Thaps263240;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 1402891 1403224 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=6 chr7 . exon 1402891 1403224 . + . ID=Thaps263240.6;Parent=Thaps263240;constitutive=1;ensembl_end_phase=1;rank=6 chr7 . CDS 1403310 1403421 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=7 chr7 . exon 1403310 1403421 . + . ID=Thaps263240.7;Parent=Thaps263240;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . CDS 1403498 1403521 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=8 chr7 . exon 1403498 1403521 . + . ID=Thaps263240.8;Parent=Thaps263240;constitutive=1;rank=8 chr7 . CDS 1403615 1403907 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=9 chr7 . exon 1403615 1403907 . + . ID=Thaps263240.9;Parent=Thaps263240;constitutive=1;ensembl_end_phase=2;rank=9 chr7 . CDS 1404029 1404233 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=10 chr7 . exon 1404029 1404233 . + . ID=Thaps263240.10;Parent=Thaps263240;constitutive=1;ensembl_end_phase=1;rank=10 chr7 . CDS 1404319 1404826 . + 0 ID=Thaps263240;Parent=Thaps263240;rank=11 chr7 . exon 1404319 1404826 . + . ID=Thaps263240.11;Parent=Thaps263240;constitutive=1;ensembl_end_phase=1;rank=11 chr7 ensembl protein_coding_gene 1395431 1397775 . + . ID=Thaps7145;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNG8];external_name=Thaps7145;logic_name=jgi_thaps3 chr7 ensembl transcript 1395431 1397775 . + . ID=Thaps7145;Parent=Thaps7145;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1395431 1395444 . + 0 ID=Thaps7145;Parent=Thaps7145;rank=1 chr7 . exon 1395431 1395444 . + . ID=Thaps7145.1;Parent=Thaps7145;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1395467 1395639 . + 0 ID=Thaps7145;Parent=Thaps7145;rank=2 chr7 . exon 1395467 1395639 . + . ID=Thaps7145.2;Parent=Thaps7145;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1395725 1397040 . + 0 ID=Thaps7145;Parent=Thaps7145;rank=3 chr7 . exon 1395725 1397040 . + . ID=Thaps7145.3;Parent=Thaps7145;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1397064 1397472 . + 0 ID=Thaps7145;Parent=Thaps7145;rank=4 chr7 . exon 1397064 1397472 . + . ID=Thaps7145.4;Parent=Thaps7145;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1397519 1397775 . + 0 ID=Thaps7145;Parent=Thaps7145;rank=5 chr7 . exon 1397519 1397775 . + . ID=Thaps7145.5;Parent=Thaps7145;constitutive=1;ensembl_end_phase=2;rank=5 chr7 ensembl protein_coding_gene 1398195 1398818 . - . ID=Thaps7146;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNG9];external_name=Thaps7146;logic_name=jgi_thaps3 chr7 ensembl transcript 1398195 1398818 . - . ID=Thaps7146;Parent=Thaps7146;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1398195 1398818 . - 0 ID=Thaps7146;Parent=Thaps7146;rank=1 chr7 . exon 1398195 1398818 . - . ID=Thaps7146.1;Parent=Thaps7146;constitutive=1;rank=1 chr7 . repeat_region 1408917 1408945 . ? . description=trf chr7 . repeat_region 1408923 1408948 . ? . description=trf chr7 ensembl protein_coding_gene 1413116 1413895 . - . ID=Thaps17707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNH3];external_name=Thaps17707;logic_name=jgi_thaps3 chr7 ensembl transcript 1413116 1413895 . - . ID=Thaps17707;Parent=Thaps17707;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1413116 1413895 . - 0 ID=Thaps17707;Parent=Thaps17707;rank=1 chr7 . exon 1413116 1413895 . - . ID=Thaps17707.1;Parent=Thaps17707;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1405954 1410439 . - . ID=Thaps23545;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNH1];external_name=Thaps23545;logic_name=jgi_thaps3 chr7 ensembl transcript 1405954 1410439 . - . ID=Thaps23545;Parent=Thaps23545;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1405954 1406132 . - 0 ID=Thaps23545;Parent=Thaps23545;rank=3 chr7 . exon 1405954 1406132 . - . ID=Thaps23545.3;Parent=Thaps23545;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1406387 1406519 . - 0 ID=Thaps23545;Parent=Thaps23545;rank=2 chr7 . exon 1406387 1406519 . - . ID=Thaps23545.2;Parent=Thaps23545;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1406600 1410439 . - 0 ID=Thaps23545;Parent=Thaps23545;rank=1 chr7 . exon 1406600 1410439 . - . ID=Thaps23545.1;Parent=Thaps23545;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1411018 1412909 . + . ID=Thaps23546;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNH2];external_name=Thaps23546;logic_name=jgi_thaps3 chr7 ensembl transcript 1411018 1412909 . + . ID=Thaps23546;Parent=Thaps23546;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1411018 1412662 . + 0 ID=Thaps23546;Parent=Thaps23546;rank=1 chr7 . exon 1411018 1412662 . + . ID=Thaps23546.1;Parent=Thaps23546;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1412749 1412909 . + 0 ID=Thaps23546;Parent=Thaps23546;rank=2 chr7 . exon 1412749 1412909 . + . ID=Thaps23546.2;Parent=Thaps23546;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . repeat_region 1415066 1415073 . ? . description=dust chr7 ensembl tRNA_gene 1421289 1421361 . - . ID=EPrTPOG00000000034;biotype=tRNA;description=tRNA-Lys for anticodon UUU [Source:TRNASCAN_SE%3BAcc:tRNA-Lys];external_name=tRNA-Lys;logic_name=ncrna_eg chr7 ensembl transcript 1421289 1421361 . - . ID=EPrTPOT00000000014;Parent=EPrTPOG00000000034;biotype=tRNA;logic_name=ncrna_eg chr7 . exon 1421289 1421361 . - . ID=EPrTPOE00000000034;Parent=EPrTPOT00000000014;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1416231 1419502 . + . ID=Thaps23548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNH5];external_name=Thaps23548;logic_name=jgi_thaps3 chr7 ensembl transcript 1416231 1419502 . + . ID=Thaps23548;Parent=Thaps23548;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1416231 1416443 . + 0 ID=Thaps23548;Parent=Thaps23548;rank=1 chr7 . exon 1416231 1416443 . + . ID=Thaps23548.1;Parent=Thaps23548;constitutive=1;rank=1 chr7 . CDS 1416678 1417912 . + 0 ID=Thaps23548;Parent=Thaps23548;rank=2 chr7 . exon 1416678 1417912 . + . ID=Thaps23548.2;Parent=Thaps23548;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1418001 1418184 . + 0 ID=Thaps23548;Parent=Thaps23548;rank=3 chr7 . exon 1418001 1418184 . + . ID=Thaps23548.3;Parent=Thaps23548;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1418249 1419502 . + 0 ID=Thaps23548;Parent=Thaps23548;rank=4 chr7 . exon 1418249 1419502 . + . ID=Thaps23548.4;Parent=Thaps23548;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 1421517 1424567 . - . ID=Thaps23549;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNH7];external_name=Thaps23549;logic_name=jgi_thaps3 chr7 ensembl transcript 1421517 1424567 . - . ID=Thaps23549;Parent=Thaps23549;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1421517 1421623 . - 0 ID=Thaps23549;Parent=Thaps23549;rank=5 chr7 . exon 1421517 1421623 . - . ID=Thaps23549.5;Parent=Thaps23549;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 1421724 1421821 . - 0 ID=Thaps23549;Parent=Thaps23549;rank=4 chr7 . exon 1421724 1421821 . - . ID=Thaps23549.4;Parent=Thaps23549;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1422065 1422245 . - 0 ID=Thaps23549;Parent=Thaps23549;rank=3 chr7 . exon 1422065 1422245 . - . ID=Thaps23549.3;Parent=Thaps23549;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1422381 1423791 . - 0 ID=Thaps23549;Parent=Thaps23549;rank=2 chr7 . exon 1422381 1423791 . - . ID=Thaps23549.2;Parent=Thaps23549;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1423908 1424567 . - 0 ID=Thaps23549;Parent=Thaps23549;rank=1 chr7 . exon 1423908 1424567 . - . ID=Thaps23549.1;Parent=Thaps23549;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1415362 1415940 . - . ID=Thaps7151;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNH4];external_name=Thaps7151;logic_name=jgi_thaps3 chr7 ensembl transcript 1415362 1415940 . - . ID=Thaps7151;Parent=Thaps7151;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1415362 1415940 . - 0 ID=Thaps7151;Parent=Thaps7151;rank=1 chr7 . exon 1415362 1415940 . - . ID=Thaps7151.1;Parent=Thaps7151;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1419815 1420345 . - . ID=Thaps7153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNH6];external_name=Thaps7153;logic_name=jgi_thaps3 chr7 ensembl transcript 1419815 1420345 . - . ID=Thaps7153;Parent=Thaps7153;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1419815 1420345 . - 0 ID=Thaps7153;Parent=Thaps7153;rank=1 chr7 . exon 1419815 1420345 . - . ID=Thaps7153.1;Parent=Thaps7153;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1431053 1431876 . - . ID=Thaps16405;biotype=protein_coding;description=SIR2-like transcriptional regulatory protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI0];external_name=Thaps16405;logic_name=jgi_thaps3 chr7 ensembl transcript 1431053 1431876 . - . ID=Thaps16405;Parent=Thaps16405;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1431053 1431565 . - 0 ID=Thaps16405;Parent=Thaps16405;rank=2 chr7 . exon 1431053 1431565 . - . ID=Thaps16405.2;Parent=Thaps16405;constitutive=1;rank=2 chr7 . CDS 1431649 1431876 . - 0 ID=Thaps16405;Parent=Thaps16405;rank=1 chr7 . exon 1431649 1431876 . - . ID=Thaps16405.1;Parent=Thaps16405;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1427464 1428668 . - . ID=Thaps23550;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNH9];external_name=Thaps23550;logic_name=jgi_thaps3 chr7 ensembl transcript 1427464 1428668 . - . ID=Thaps23550;Parent=Thaps23550;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1427464 1427927 . - 0 ID=Thaps23550;Parent=Thaps23550;rank=3 chr7 . exon 1427464 1427927 . - . ID=Thaps23550.3;Parent=Thaps23550;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1428005 1428138 . - 0 ID=Thaps23550;Parent=Thaps23550;rank=2 chr7 . exon 1428005 1428138 . - . ID=Thaps23550.2;Parent=Thaps23550;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1428169 1428668 . - 0 ID=Thaps23550;Parent=Thaps23550;rank=1 chr7 . exon 1428169 1428668 . - . ID=Thaps23550.1;Parent=Thaps23550;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1425356 1427319 . + . ID=Thaps7155;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNH8];external_name=Thaps7155;logic_name=jgi_thaps3 chr7 ensembl transcript 1425356 1427319 . + . ID=Thaps7155;Parent=Thaps7155;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1425356 1425438 . + 0 ID=Thaps7155;Parent=Thaps7155;rank=1 chr7 . exon 1425356 1425438 . + . ID=Thaps7155.1;Parent=Thaps7155;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1425580 1427173 . + 0 ID=Thaps7155;Parent=Thaps7155;rank=2 chr7 . exon 1425580 1427173 . + . ID=Thaps7155.2;Parent=Thaps7155;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1427239 1427319 . + 0 ID=Thaps7155;Parent=Thaps7155;rank=3 chr7 . exon 1427239 1427319 . + . ID=Thaps7155.3;Parent=Thaps7155;constitutive=1;rank=3 chr7 . repeat_region 1434726 1434733 . ? . description=dust chr7 . repeat_region 1435209 1435359 . - . description=Copia5I_TP chr7 . repeat_region 1435429 1435966 . - . description=Copia5I_TP chr7 . repeat_region 1436049 1436294 . - . description=Copia5I_TP chr7 . repeat_region 1441929 1441957 . ? . description=dust chr7 ensembl protein_coding_gene 1437264 1438734 . + . ID=Thaps23552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI1];external_name=Thaps23552;logic_name=jgi_thaps3 chr7 ensembl transcript 1437264 1438734 . + . ID=Thaps23552;Parent=Thaps23552;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1437264 1438651 . + 0 ID=Thaps23552;Parent=Thaps23552;rank=1 chr7 . exon 1437264 1438651 . + . ID=Thaps23552.1;Parent=Thaps23552;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1438692 1438734 . + 0 ID=Thaps23552;Parent=Thaps23552;rank=2 chr7 . exon 1438692 1438734 . + . ID=Thaps23552.2;Parent=Thaps23552;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 1442976 1445084 . - . ID=Thaps23554;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI5];external_name=Thaps23554;logic_name=jgi_thaps3 chr7 ensembl transcript 1442976 1445084 . - . ID=Thaps23554;Parent=Thaps23554;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1442976 1445084 . - 0 ID=Thaps23554;Parent=Thaps23554;rank=1 chr7 . exon 1442976 1445084 . - . ID=Thaps23554.1;Parent=Thaps23554;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1439059 1440666 . - . ID=Thaps269276;biotype=protein_coding;description=Hypothetical RNA binding protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI2];external_name=Thaps269276;logic_name=jgi_thaps3 chr7 ensembl transcript 1439059 1440666 . - . ID=Thaps269276;Parent=Thaps269276;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1439059 1440666 . - 0 ID=Thaps269276;Parent=Thaps269276;rank=1 chr7 . exon 1439059 1440666 . - . ID=Thaps269276.1;Parent=Thaps269276;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1442434 1442619 . + . ID=Thaps35642;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI4];external_name=Thaps35642;logic_name=jgi_thaps3 chr7 ensembl transcript 1442434 1442619 . + . ID=Thaps35642;Parent=Thaps35642;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1442434 1442619 . + 0 ID=Thaps35642;Parent=Thaps35642;rank=1 chr7 . exon 1442434 1442619 . + . ID=Thaps35642.1;Parent=Thaps35642;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1441008 1441460 . + . ID=Thaps7160;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI3];external_name=Thaps7160;logic_name=jgi_thaps3 chr7 ensembl transcript 1441008 1441460 . + . ID=Thaps7160;Parent=Thaps7160;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1441008 1441460 . + 0 ID=Thaps7160;Parent=Thaps7160;rank=1 chr7 . exon 1441008 1441460 . + . ID=Thaps7160.1;Parent=Thaps7160;constitutive=1;rank=1 chr7 . repeat_region 1451568 1451600 . ? . description=trf chr7 . repeat_region 1451573 1451624 . ? . description=trf chr7 . repeat_region 1451597 1451632 . ? . description=trf chr7 . repeat_region 1453290 1453376 . ? . description=trf chr7 ensembl protein_coding_gene 1447348 1451518 . - . ID=Thaps23556;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI6];external_name=Thaps23556;logic_name=jgi_thaps3 chr7 ensembl transcript 1447348 1451518 . - . ID=Thaps23556;Parent=Thaps23556;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1447348 1447503 . - 0 ID=Thaps23556;Parent=Thaps23556;rank=5 chr7 . exon 1447348 1447503 . - . ID=Thaps23556.5;Parent=Thaps23556;constitutive=1;rank=5 chr7 . CDS 1447596 1447684 . - 0 ID=Thaps23556;Parent=Thaps23556;rank=4 chr7 . exon 1447596 1447684 . - . ID=Thaps23556.4;Parent=Thaps23556;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1447762 1448243 . - 0 ID=Thaps23556;Parent=Thaps23556;rank=3 chr7 . exon 1447762 1448243 . - . ID=Thaps23556.3;Parent=Thaps23556;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1448329 1448371 . - 0 ID=Thaps23556;Parent=Thaps23556;rank=2 chr7 . exon 1448329 1448371 . - . ID=Thaps23556.2;Parent=Thaps23556;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1448458 1451518 . - 0 ID=Thaps23556;Parent=Thaps23556;rank=1 chr7 . exon 1448458 1451518 . - . ID=Thaps23556.1;Parent=Thaps23556;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1451916 1454279 . + . ID=Thaps23557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI7];external_name=Thaps23557;logic_name=jgi_thaps3 chr7 ensembl transcript 1451916 1454279 . + . ID=Thaps23557;Parent=Thaps23557;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1451916 1454279 . + 0 ID=Thaps23557;Parent=Thaps23557;rank=1 chr7 . exon 1451916 1454279 . + . ID=Thaps23557.1;Parent=Thaps23557;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1454416 1455661 . - . ID=Thaps7166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI8];external_name=Thaps7166;logic_name=jgi_thaps3 chr7 ensembl transcript 1454416 1455661 . - . ID=Thaps7166;Parent=Thaps7166;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1454416 1454719 . - 0 ID=Thaps7166;Parent=Thaps7166;rank=3 chr7 . exon 1454416 1454719 . - . ID=Thaps7166.3;Parent=Thaps7166;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1454791 1455529 . - 0 ID=Thaps7166;Parent=Thaps7166;rank=2 chr7 . CDS 1455583 1455661 . - 0 ID=Thaps7166;Parent=Thaps7166;rank=1 chr7 ensembl protein_coding_gene 1456344 1456646 . - . ID=Thaps18771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNI9];external_name=Thaps18771;logic_name=jgi_thaps3 chr7 ensembl transcript 1456344 1456646 . - . ID=Thaps18771;Parent=Thaps18771;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1456344 1456646 . - 0 ID=Thaps18771;Parent=Thaps18771;rank=1 chr7 . exon 1456344 1456646 . - . ID=Thaps18771.1;Parent=Thaps18771;constitutive=1;rank=1 chr7 ensembl gene 1462749 1464404 . + . ID=Thaps263244;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 1462749 1464404 . + . ID=Thaps263244;Parent=Thaps263244;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 1462749 1463737 . + . ID=Thaps263244.1;Parent=Thaps263244;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . exon 1463822 1464024 . + . ID=Thaps263244.2;Parent=Thaps263244;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 1464127 1464404 . + . ID=Thaps263244.3;Parent=Thaps263244;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1459480 1461011 . + . ID=Thaps41392;biotype=protein_coding;description=Silicic acid transporter%2C silicon transport [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ0];external_name=SIT;logic_name=jgi_thaps3 chr7 ensembl transcript 1459480 1461011 . + . ID=Thaps41392;Parent=Thaps41392;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1459480 1459542 . + 0 ID=Thaps41392;Parent=Thaps41392;rank=1 chr7 . exon 1459480 1459542 . + . ID=Thaps41392.1;Parent=Thaps41392;constitutive=1;rank=1 chr7 . CDS 1459647 1461011 . + 0 ID=Thaps41392;Parent=Thaps41392;rank=2 chr7 . exon 1459647 1461011 . + . ID=Thaps41392.2;Parent=Thaps41392;constitutive=1;rank=2 chr7 . exon 1454791 1455529 . - . ID=Thaps7166.2;Parent=Thaps7166;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 1455583 1455661 . - . ID=Thaps7166.1;Parent=Thaps7166;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 1465672 1465697 . ? . description=trf chr7 . repeat_region 1466359 1466391 . ? . description=dust chr7 . repeat_region 1466360 1466386 . ? . description=trf chr7 . repeat_region 1466395 1466419 . ? . description=trf chr7 . repeat_region 1467670 1467710 . ? . description=dust chr7 ensembl protein_coding_gene 1465643 1470218 . + . ID=Thaps23560;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ1];external_name=Thaps23560;logic_name=jgi_thaps3 chr7 ensembl transcript 1465643 1470218 . + . ID=Thaps23560;Parent=Thaps23560;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1465643 1465918 . + 0 ID=Thaps23560;Parent=Thaps23560;rank=1 chr7 . exon 1465643 1465918 . + . ID=Thaps23560.1;Parent=Thaps23560;constitutive=1;rank=1 chr7 . CDS 1466017 1467196 . + 0 ID=Thaps23560;Parent=Thaps23560;rank=2 chr7 . exon 1466017 1467196 . + . ID=Thaps23560.2;Parent=Thaps23560;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1467281 1468034 . + 0 ID=Thaps23560;Parent=Thaps23560;rank=3 chr7 . exon 1467281 1468034 . + . ID=Thaps23560.3;Parent=Thaps23560;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1468183 1468205 . + 0 ID=Thaps23560;Parent=Thaps23560;rank=4 chr7 . exon 1468183 1468205 . + . ID=Thaps23560.4;Parent=Thaps23560;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1468354 1470218 . + 0 ID=Thaps23560;Parent=Thaps23560;rank=5 chr7 . exon 1468354 1470218 . + . ID=Thaps23560.5;Parent=Thaps23560;constitutive=1;ensembl_end_phase=2;rank=5 chr7 ensembl protein_coding_gene 1470767 1473841 . + . ID=Thaps23561;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ2];external_name=Thaps23561;logic_name=jgi_thaps3 chr7 ensembl transcript 1470767 1473841 . + . ID=Thaps23561;Parent=Thaps23561;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1470767 1471452 . + 0 ID=Thaps23561;Parent=Thaps23561;rank=1 chr7 . exon 1470767 1471452 . + . ID=Thaps23561.1;Parent=Thaps23561;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1471531 1472590 . + 0 ID=Thaps23561;Parent=Thaps23561;rank=2 chr7 . exon 1471531 1472590 . + . ID=Thaps23561.2;Parent=Thaps23561;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1472672 1473841 . + 0 ID=Thaps23561;Parent=Thaps23561;rank=3 chr7 . exon 1472672 1473841 . + . ID=Thaps23561.3;Parent=Thaps23561;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1474283 1475062 . - . ID=Thaps7172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ3];external_name=Thaps7172;logic_name=jgi_thaps3 chr7 ensembl transcript 1474283 1475062 . - . ID=Thaps7172;Parent=Thaps7172;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1474283 1475062 . - 0 ID=Thaps7172;Parent=Thaps7172;rank=1 chr7 . exon 1474283 1475062 . - . ID=Thaps7172.1;Parent=Thaps7172;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1475824 1478610 . + . ID=Thaps23562;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ4];external_name=Thaps23562;logic_name=jgi_thaps3 chr7 ensembl transcript 1475824 1478610 . + . ID=Thaps23562;Parent=Thaps23562;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1475824 1478610 . + 0 ID=Thaps23562;Parent=Thaps23562;rank=1 chr7 . exon 1475824 1478610 . + . ID=Thaps23562.1;Parent=Thaps23562;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1482246 1483338 . + . ID=Thaps35693;biotype=protein_coding;description=Sir2-type regulatory transcription factor silent information regulator protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ6];external_name=Thaps35693;logic_name=jgi_thaps3 chr7 ensembl transcript 1482246 1483338 . + . ID=Thaps35693;Parent=Thaps35693;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1482246 1482356 . + 0 ID=Thaps35693;Parent=Thaps35693;rank=1 chr7 . exon 1482246 1482356 . + . ID=Thaps35693.1;Parent=Thaps35693;constitutive=1;rank=1 chr7 . CDS 1482448 1482584 . + 0 ID=Thaps35693;Parent=Thaps35693;rank=2 chr7 . exon 1482448 1482584 . + . ID=Thaps35693.2;Parent=Thaps35693;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1482675 1482958 . + 0 ID=Thaps35693;Parent=Thaps35693;rank=3 chr7 . exon 1482675 1482958 . + . ID=Thaps35693.3;Parent=Thaps35693;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1483031 1483338 . + 0 ID=Thaps35693;Parent=Thaps35693;rank=4 chr7 . exon 1483031 1483338 . + . ID=Thaps35693.4;Parent=Thaps35693;constitutive=1;ensembl_end_phase=2;rank=4 chr7 ensembl protein_coding_gene 1479498 1481473 . - . ID=Thaps7174;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ5];external_name=Thaps7174;logic_name=jgi_thaps3 chr7 ensembl transcript 1479498 1481473 . - . ID=Thaps7174;Parent=Thaps7174;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1479498 1479584 . - 0 ID=Thaps7174;Parent=Thaps7174;rank=3 chr7 . exon 1479498 1479584 . - . ID=Thaps7174.3;Parent=Thaps7174;constitutive=1;rank=3 chr7 . CDS 1479798 1481111 . - 0 ID=Thaps7174;Parent=Thaps7174;rank=2 chr7 . exon 1479798 1481111 . - . ID=Thaps7174.2;Parent=Thaps7174;constitutive=1;rank=2 chr7 . CDS 1481216 1481473 . - 0 ID=Thaps7174;Parent=Thaps7174;rank=1 chr7 . exon 1481216 1481473 . - . ID=Thaps7174.1;Parent=Thaps7174;constitutive=1;rank=1 chr7 . repeat_region 1491157 1491181 . ? . description=trf chr7 . repeat_region 1491429 1491436 . ? . description=dust chr7 . repeat_region 1491959 1491978 . ? . description=trf chr7 ensembl protein_coding_gene 1489270 1489500 . - . ID=Thaps20452;biotype=protein_coding;description=RK28%2C ribosomal protein 28%2C 50S large ribosomal subunit%2C chloroplast [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ8];external_name=RK28;logic_name=jgi_thaps3 chr7 ensembl transcript 1489270 1489500 . - . ID=Thaps20452;Parent=Thaps20452;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1489270 1489500 . - 0 ID=Thaps20452;Parent=Thaps20452;rank=1 chr7 . exon 1489270 1489500 . - . ID=Thaps20452.1;Parent=Thaps20452;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1491359 1497713 . + . ID=Thaps23565;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNK0];external_name=Thaps23565;logic_name=jgi_thaps3 chr7 ensembl transcript 1491359 1497713 . + . ID=Thaps23565;Parent=Thaps23565;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1491359 1496658 . + 0 ID=Thaps23565;Parent=Thaps23565;rank=1 chr7 . exon 1491359 1496658 . + . ID=Thaps23565.1;Parent=Thaps23565;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1496738 1497713 . + 0 ID=Thaps23565;Parent=Thaps23565;rank=2 chr7 ensembl protein_coding_gene 1486969 1488678 . + . ID=Thaps263246;biotype=protein_coding;description=Phospholipase C [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ7];external_name=Thaps263246;logic_name=jgi_thaps3 chr7 ensembl transcript 1486969 1488678 . + . ID=Thaps263246;Parent=Thaps263246;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1486969 1487083 . + 0 ID=Thaps263246;Parent=Thaps263246;rank=1 chr7 . exon 1486969 1487083 . + . ID=Thaps263246.1;Parent=Thaps263246;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1487157 1487235 . + 0 ID=Thaps263246;Parent=Thaps263246;rank=2 chr7 . exon 1487157 1487235 . + . ID=Thaps263246.2;Parent=Thaps263246;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1487312 1487533 . + 0 ID=Thaps263246;Parent=Thaps263246;rank=3 chr7 . exon 1487312 1487533 . + . ID=Thaps263246.3;Parent=Thaps263246;constitutive=1;rank=3 chr7 . CDS 1487622 1487727 . + 0 ID=Thaps263246;Parent=Thaps263246;rank=4 chr7 . exon 1487622 1487727 . + . ID=Thaps263246.4;Parent=Thaps263246;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1487742 1487783 . + 0 ID=Thaps263246;Parent=Thaps263246;rank=5 chr7 . exon 1487742 1487783 . + . ID=Thaps263246.5;Parent=Thaps263246;constitutive=1;rank=5 chr7 . CDS 1487856 1488085 . + 0 ID=Thaps263246;Parent=Thaps263246;rank=6 chr7 . exon 1487856 1488085 . + . ID=Thaps263246.6;Parent=Thaps263246;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . CDS 1488162 1488678 . + 0 ID=Thaps263246;Parent=Thaps263246;rank=7 chr7 . exon 1488162 1488678 . + . ID=Thaps263246.7;Parent=Thaps263246;constitutive=1;ensembl_end_phase=1;rank=7 chr7 ensembl protein_coding_gene 1490065 1490901 . + . ID=Thaps35740;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNJ9];external_name=Thaps35740;logic_name=jgi_thaps3 chr7 ensembl transcript 1490065 1490901 . + . ID=Thaps35740;Parent=Thaps35740;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1490065 1490212 . + 0 ID=Thaps35740;Parent=Thaps35740;rank=1 chr7 . exon 1490065 1490212 . + . ID=Thaps35740.1;Parent=Thaps35740;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1490306 1490901 . + 0 ID=Thaps35740;Parent=Thaps35740;rank=2 chr7 . exon 1490306 1490901 . + . ID=Thaps35740.2;Parent=Thaps35740;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . exon 1496738 1497713 . + . ID=Thaps23565.2;Parent=Thaps23565;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 1502720 1504364 . - . ID=Thaps23566;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNK2];external_name=Thaps23566;logic_name=jgi_thaps3 chr7 ensembl transcript 1502720 1504364 . - . ID=Thaps23566;Parent=Thaps23566;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1502720 1502907 . - 0 ID=Thaps23566;Parent=Thaps23566;rank=2 chr7 . exon 1502720 1502907 . - . ID=Thaps23566.2;Parent=Thaps23566;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1502963 1504364 . - 0 ID=Thaps23566;Parent=Thaps23566;rank=1 chr7 . exon 1502963 1504364 . - . ID=Thaps23566.1;Parent=Thaps23566;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1499202 1502462 . + . ID=Thaps7180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNK1];external_name=Thaps7180;logic_name=jgi_thaps3 chr7 ensembl transcript 1499202 1502462 . + . ID=Thaps7180;Parent=Thaps7180;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1499202 1500315 . + 0 ID=Thaps7180;Parent=Thaps7180;rank=1 chr7 . exon 1499202 1500315 . + . ID=Thaps7180.1;Parent=Thaps7180;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1500425 1501627 . + 0 ID=Thaps7180;Parent=Thaps7180;rank=2 chr7 . exon 1500425 1501627 . + . ID=Thaps7180.2;Parent=Thaps7180;constitutive=1;rank=2 chr7 . CDS 1501696 1502462 . + 0 ID=Thaps7180;Parent=Thaps7180;rank=3 chr7 . exon 1501696 1502462 . + . ID=Thaps7180.3;Parent=Thaps7180;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . repeat_region 1504702 1504711 . ? . description=dust chr7 ensembl protein_coding_gene 1506855 1507329 . - . ID=Thaps19632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNK4];external_name=Thaps19632;logic_name=jgi_thaps3 chr7 ensembl transcript 1506855 1507329 . - . ID=Thaps19632;Parent=Thaps19632;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1506855 1507010 . - 0 ID=Thaps19632;Parent=Thaps19632;rank=2 chr7 . exon 1506855 1507010 . - . ID=Thaps19632.2;Parent=Thaps19632;constitutive=1;rank=2 chr7 . CDS 1507138 1507329 . - 0 ID=Thaps19632;Parent=Thaps19632;rank=1 chr7 . exon 1507138 1507329 . - . ID=Thaps19632.1;Parent=Thaps19632;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1507918 1510243 . + . ID=Thaps23568;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNK5];external_name=Thaps23568;logic_name=jgi_thaps3 chr7 ensembl transcript 1507918 1510243 . + . ID=Thaps23568;Parent=Thaps23568;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1507918 1509739 . + 0 ID=Thaps23568;Parent=Thaps23568;rank=1 chr7 . exon 1507918 1509739 . + . ID=Thaps23568.1;Parent=Thaps23568;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1510035 1510243 . + 0 ID=Thaps23568;Parent=Thaps23568;rank=2 chr7 . exon 1510035 1510243 . + . ID=Thaps23568.2;Parent=Thaps23568;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 1505165 1506127 . + . ID=Thaps7182;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNK3];external_name=Thaps7182;logic_name=jgi_thaps3 chr7 ensembl transcript 1505165 1506127 . + . ID=Thaps7182;Parent=Thaps7182;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1505165 1506127 . + 0 ID=Thaps7182;Parent=Thaps7182;rank=1 chr7 . exon 1505165 1506127 . + . ID=Thaps7182.1;Parent=Thaps7182;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1511674 1513365 . - . ID=Thaps7186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNK6];external_name=Thaps7186;logic_name=jgi_thaps3 chr7 ensembl transcript 1511674 1513365 . - . ID=Thaps7186;Parent=Thaps7186;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1511674 1512367 . - 0 ID=Thaps7186;Parent=Thaps7186;rank=3 chr7 . exon 1511674 1512367 . - . ID=Thaps7186.3;Parent=Thaps7186;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1512406 1512650 . - 0 ID=Thaps7186;Parent=Thaps7186;rank=2 chr7 . exon 1512406 1512650 . - . ID=Thaps7186.2;Parent=Thaps7186;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1512748 1513365 . - 0 ID=Thaps7186;Parent=Thaps7186;rank=1 chr7 . exon 1512748 1513365 . - . ID=Thaps7186.1;Parent=Thaps7186;constitutive=1;rank=1 chr7 . repeat_region 1516537 1516569 . ? . description=trf chr7 . repeat_region 1517885 1517928 . ? . description=trf chr7 ensembl protein_coding_gene 1521246 1522213 . - . ID=Thaps23571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNL0];external_name=Thaps23571;logic_name=jgi_thaps3 chr7 ensembl transcript 1521246 1522213 . - . ID=Thaps23571;Parent=Thaps23571;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1521246 1521711 . - 0 ID=Thaps23571;Parent=Thaps23571;rank=2 chr7 . exon 1521246 1521711 . - . ID=Thaps23571.2;Parent=Thaps23571;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1522059 1522213 . - 0 ID=Thaps23571;Parent=Thaps23571;rank=1 chr7 . exon 1522059 1522213 . - . ID=Thaps23571.1;Parent=Thaps23571;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1514807 1515934 . + . ID=Thaps28998;biotype=protein_coding;description=Aldo-keto oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B5YNK7];external_name=Thaps28998;logic_name=jgi_thaps3 chr7 ensembl transcript 1514807 1515934 . + . ID=Thaps28998;Parent=Thaps28998;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1514807 1515934 . + 0 ID=Thaps28998;Parent=Thaps28998;rank=1 chr7 . exon 1514807 1515934 . + . ID=Thaps28998.1;Parent=Thaps28998;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1519615 1520481 . - . ID=Thaps35584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNK9];external_name=Thaps35584;logic_name=jgi_thaps3 chr7 ensembl transcript 1519615 1520481 . - . ID=Thaps35584;Parent=Thaps35584;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1519615 1520291 . - 0 ID=Thaps35584;Parent=Thaps35584;rank=2 chr7 . exon 1519615 1520291 . - . ID=Thaps35584.2;Parent=Thaps35584;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1520352 1520481 . - 0 ID=Thaps35584;Parent=Thaps35584;rank=1 chr7 . exon 1520352 1520481 . - . ID=Thaps35584.1;Parent=Thaps35584;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1516226 1519377 . + . ID=Thaps7188;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNK8];external_name=Thaps7188;logic_name=jgi_thaps3 chr7 ensembl transcript 1516226 1519377 . + . ID=Thaps7188;Parent=Thaps7188;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1516226 1516503 . + 0 ID=Thaps7188;Parent=Thaps7188;rank=1 chr7 . exon 1516226 1516503 . + . ID=Thaps7188.1;Parent=Thaps7188;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1516614 1516923 . + 0 ID=Thaps7188;Parent=Thaps7188;rank=2 chr7 . exon 1516614 1516923 . + . ID=Thaps7188.2;Parent=Thaps7188;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1517447 1518067 . + 0 ID=Thaps7188;Parent=Thaps7188;rank=3 chr7 . exon 1517447 1518067 . + . ID=Thaps7188.3;Parent=Thaps7188;constitutive=1;rank=3 chr7 . CDS 1518145 1519377 . + 0 ID=Thaps7188;Parent=Thaps7188;rank=4 chr7 . exon 1518145 1519377 . + . ID=Thaps7188.4;Parent=Thaps7188;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 1522463 1523623 . + . ID=Thaps7191;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNL1];external_name=Thaps7191;logic_name=jgi_thaps3 chr7 ensembl transcript 1522463 1523623 . + . ID=Thaps7191;Parent=Thaps7191;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1522463 1523623 . + 0 ID=Thaps7191;Parent=Thaps7191;rank=1 chr7 . exon 1522463 1523623 . + . ID=Thaps7191.1;Parent=Thaps7191;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1523757 1525574 . - . ID=Thaps7192;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNL2];external_name=Thaps7192;logic_name=jgi_thaps3 chr7 ensembl transcript 1523757 1525574 . - . ID=Thaps7192;Parent=Thaps7192;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1523757 1525574 . - 0 ID=Thaps7192;Parent=Thaps7192;rank=1 chr7 . exon 1523757 1525574 . - . ID=Thaps7192.1;Parent=Thaps7192;constitutive=1;rank=1 chr7 . repeat_region 1531875 1531893 . ? . description=dust chr7 ensembl protein_coding_gene 1528157 1532079 . - . ID=Thaps23572;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNL4];external_name=Thaps23572;logic_name=jgi_thaps3 chr7 ensembl transcript 1528157 1532079 . - . ID=Thaps23572;Parent=Thaps23572;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1528157 1529180 . - 0 ID=Thaps23572;Parent=Thaps23572;rank=3 chr7 . exon 1528157 1529180 . - . ID=Thaps23572.3;Parent=Thaps23572;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1529246 1530813 . - 0 ID=Thaps23572;Parent=Thaps23572;rank=2 chr7 . exon 1529246 1530813 . - . ID=Thaps23572.2;Parent=Thaps23572;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1530928 1532079 . - 0 ID=Thaps23572;Parent=Thaps23572;rank=1 chr7 . exon 1530928 1532079 . - . ID=Thaps23572.1;Parent=Thaps23572;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1532434 1533743 . + . ID=Thaps23573;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNL5];external_name=Thaps23573;logic_name=jgi_thaps3 chr7 ensembl transcript 1532434 1533743 . + . ID=Thaps23573;Parent=Thaps23573;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1532434 1532905 . + 0 ID=Thaps23573;Parent=Thaps23573;rank=1 chr7 . exon 1532434 1532905 . + . ID=Thaps23573.1;Parent=Thaps23573;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1533013 1533743 . + 0 ID=Thaps23573;Parent=Thaps23573;rank=2 chr7 . exon 1533013 1533743 . + . ID=Thaps23573.2;Parent=Thaps23573;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 1525964 1528030 . + . ID=Thaps7193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNL3];external_name=Thaps7193;logic_name=jgi_thaps3 chr7 ensembl transcript 1525964 1528030 . + . ID=Thaps7193;Parent=Thaps7193;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1525964 1528030 . + 0 ID=Thaps7193;Parent=Thaps7193;rank=1 chr7 . exon 1525964 1528030 . + . ID=Thaps7193.1;Parent=Thaps7193;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1543497 1545461 . - . ID=Thaps23576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNM0];external_name=Thaps23576;logic_name=jgi_thaps3 chr7 ensembl transcript 1543497 1545461 . - . ID=Thaps23576;Parent=Thaps23576;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1543497 1543700 . - 0 ID=Thaps23576;Parent=Thaps23576;rank=3 chr7 . exon 1543497 1543700 . - . ID=Thaps23576.3;Parent=Thaps23576;constitutive=1;rank=3 chr7 . CDS 1543782 1543913 . - 0 ID=Thaps23576;Parent=Thaps23576;rank=2 chr7 . exon 1543782 1543913 . - . ID=Thaps23576.2;Parent=Thaps23576;constitutive=1;rank=2 chr7 . CDS 1544001 1545461 . - 0 ID=Thaps23576;Parent=Thaps23576;rank=1 chr7 . exon 1544001 1545461 . - . ID=Thaps23576.1;Parent=Thaps23576;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1536516 1538566 . + . ID=Thaps263251;biotype=protein_coding;description=Protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B5YNL7];external_name=Thaps263251;logic_name=jgi_thaps3 chr7 ensembl transcript 1536516 1538566 . + . ID=Thaps263251;Parent=Thaps263251;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1536516 1536923 . + 0 ID=Thaps263251;Parent=Thaps263251;rank=1 chr7 . exon 1536516 1536923 . + . ID=Thaps263251.1;Parent=Thaps263251;constitutive=1;rank=1 chr7 . CDS 1537005 1538062 . + 0 ID=Thaps263251;Parent=Thaps263251;rank=2 chr7 . exon 1537005 1538062 . + . ID=Thaps263251.2;Parent=Thaps263251;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1538284 1538311 . + 0 ID=Thaps263251;Parent=Thaps263251;rank=3 chr7 . exon 1538284 1538311 . + . ID=Thaps263251.3;Parent=Thaps263251;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1538405 1538566 . + 0 ID=Thaps263251;Parent=Thaps263251;rank=4 chr7 . exon 1538405 1538566 . + . ID=Thaps263251.4;Parent=Thaps263251;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 1534438 1535208 . + . ID=Thaps269281;biotype=protein_coding;description=Protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B5YNL6];external_name=Thaps269281;logic_name=jgi_thaps3 chr7 ensembl transcript 1534438 1535208 . + . ID=Thaps269281;Parent=Thaps269281;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1534438 1534625 . + 0 ID=Thaps269281;Parent=Thaps269281;rank=1 chr7 . exon 1534438 1534625 . + . ID=Thaps269281.1;Parent=Thaps269281;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1534689 1534888 . + 0 ID=Thaps269281;Parent=Thaps269281;rank=2 chr7 . exon 1534689 1534888 . + . ID=Thaps269281.2;Parent=Thaps269281;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1534976 1535208 . + 0 ID=Thaps269281;Parent=Thaps269281;rank=3 chr7 . exon 1534976 1535208 . + . ID=Thaps269281.3;Parent=Thaps269281;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1539310 1539894 . - . ID=Thaps29000;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNL9];external_name=Thaps29000;logic_name=jgi_thaps3 chr7 ensembl transcript 1539310 1539894 . - . ID=Thaps29000;Parent=Thaps29000;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1539310 1539894 . - 0 ID=Thaps29000;Parent=Thaps29000;rank=1 chr7 . exon 1539310 1539894 . - . ID=Thaps29000.1;Parent=Thaps29000;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1538593 1538865 . + . ID=Thaps35350;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNL8];external_name=Thaps35350;logic_name=jgi_thaps3 chr7 ensembl transcript 1538593 1538865 . + . ID=Thaps35350;Parent=Thaps35350;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1538593 1538865 . + 0 ID=Thaps35350;Parent=Thaps35350;rank=1 chr7 . exon 1538593 1538865 . + . ID=Thaps35350.1;Parent=Thaps35350;constitutive=1;rank=1 chr7 . repeat_region 1545969 1546203 . - . description=Copia6LTR_TP chr7 . repeat_region 1546204 1549646 . - . description=Copia6I_TP chr7 . repeat_region 1550375 1552448 . - . description=Copia6I_TP chr7 . repeat_region 1552449 1552683 . - . description=Copia6LTR_TP chr7 ensembl gene 1546379 1546786 . - . ID=Thaps263252;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 1546379 1546786 . - . ID=Thaps263252;Parent=Thaps263252;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 1546379 1546786 . - . ID=Thaps263252.1;Parent=Thaps263252;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1553647 1554078 . - . ID=Thaps7199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNM1];external_name=Thaps7199;logic_name=jgi_thaps3 chr7 ensembl transcript 1553647 1554078 . - . ID=Thaps7199;Parent=Thaps7199;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1553647 1554078 . - 0 ID=Thaps7199;Parent=Thaps7199;rank=1 chr7 . exon 1553647 1554078 . - . ID=Thaps7199.1;Parent=Thaps7199;constitutive=1;rank=1 chr7 . repeat_region 1556725 1556801 . ? . description=trf chr7 . repeat_region 1557299 1557330 . ? . description=trf chr7 . repeat_region 1557299 1557336 . ? . description=trf chr7 . repeat_region 1557702 1557709 . ? . description=dust chr7 . repeat_region 1558106 1558114 . ? . description=dust chr7 . repeat_region 1559036 1559045 . ? . description=dust chr7 . repeat_region 1560939 1560958 . ? . description=dust chr7 ensembl protein_coding_gene 1558535 1560277 . + . ID=Thaps23577;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNM3];external_name=Thaps23577;logic_name=jgi_thaps3 chr7 ensembl transcript 1558535 1560277 . + . ID=Thaps23577;Parent=Thaps23577;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1558535 1558996 . + 0 ID=Thaps23577;Parent=Thaps23577;rank=1 chr7 . exon 1558535 1558996 . + . ID=Thaps23577.1;Parent=Thaps23577;constitutive=1;rank=1 chr7 . CDS 1559102 1560277 . + 0 ID=Thaps23577;Parent=Thaps23577;rank=2 chr7 . exon 1559102 1560277 . + . ID=Thaps23577.2;Parent=Thaps23577;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1561985 1565930 . + . ID=Thaps41403;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B5YNM5];external_name=Thaps41403;logic_name=jgi_thaps3 chr7 ensembl transcript 1561985 1565930 . + . ID=Thaps41403;Parent=Thaps41403;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1561985 1562688 . + 0 ID=Thaps41403;Parent=Thaps41403;rank=1 chr7 . exon 1561985 1562688 . + . ID=Thaps41403.1;Parent=Thaps41403;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1562968 1564310 . + 0 ID=Thaps41403;Parent=Thaps41403;rank=2 chr7 . exon 1562968 1564310 . + . ID=Thaps41403.2;Parent=Thaps41403;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1564397 1564486 . + 0 ID=Thaps41403;Parent=Thaps41403;rank=3 chr7 . CDS 1564581 1565114 . + 0 ID=Thaps41403;Parent=Thaps41403;rank=4 chr7 . CDS 1565201 1565440 . + 0 ID=Thaps41403;Parent=Thaps41403;rank=5 chr7 . CDS 1565527 1565930 . + 0 ID=Thaps41403;Parent=Thaps41403;rank=6 chr7 ensembl protein_coding_gene 1555216 1556498 . - . ID=Thaps7200;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNM2];external_name=Thaps7200;logic_name=jgi_thaps3 chr7 ensembl transcript 1555216 1556498 . - . ID=Thaps7200;Parent=Thaps7200;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1555216 1555983 . - 0 ID=Thaps7200;Parent=Thaps7200;rank=3 chr7 . exon 1555216 1555983 . - . ID=Thaps7200.3;Parent=Thaps7200;constitutive=1;rank=3 chr7 . CDS 1556071 1556369 . - 0 ID=Thaps7200;Parent=Thaps7200;rank=2 chr7 . exon 1556071 1556369 . - . ID=Thaps7200.2;Parent=Thaps7200;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1556441 1556498 . - 0 ID=Thaps7200;Parent=Thaps7200;rank=1 chr7 . exon 1556441 1556498 . - . ID=Thaps7200.1;Parent=Thaps7200;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1561094 1561864 . + . ID=Thaps7202;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNM4];external_name=Thaps7202;logic_name=jgi_thaps3 chr7 ensembl transcript 1561094 1561864 . + . ID=Thaps7202;Parent=Thaps7202;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1561094 1561864 . + 0 ID=Thaps7202;Parent=Thaps7202;rank=1 chr7 . exon 1561094 1561864 . + . ID=Thaps7202.1;Parent=Thaps7202;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1568066 1568554 . - . ID=Thaps29007;biotype=protein_coding;description=RL21%2C ribosomal protein 21%2C 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YNM6];external_name=RL21;logic_name=jgi_thaps3 chr7 ensembl transcript 1568066 1568554 . - . ID=Thaps29007;Parent=Thaps29007;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1568066 1568554 . - 0 ID=Thaps29007;Parent=Thaps29007;rank=1 chr7 . exon 1568066 1568554 . - . ID=Thaps29007.1;Parent=Thaps29007;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1573233 1576344 . - . ID=Thaps29008;biotype=protein_coding;description=Bifunctional aspartokinase/homoserine dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B5YNN0];external_name=Thaps29008;logic_name=jgi_thaps3 chr7 ensembl transcript 1573233 1576344 . - . ID=Thaps29008;Parent=Thaps29008;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1573233 1574522 . - 0 ID=Thaps29008;Parent=Thaps29008;rank=4 chr7 . exon 1573233 1574522 . - . ID=Thaps29008.4;Parent=Thaps29008;constitutive=1;rank=4 chr7 . CDS 1574638 1575383 . - 0 ID=Thaps29008;Parent=Thaps29008;rank=3 chr7 . CDS 1575495 1575896 . - 0 ID=Thaps29008;Parent=Thaps29008;rank=2 chr7 . CDS 1575972 1576344 . - 0 ID=Thaps29008;Parent=Thaps29008;rank=1 chr7 . exon 1564397 1564486 . + . ID=Thaps41403.3;Parent=Thaps41403;constitutive=1;rank=3 chr7 . exon 1564581 1565114 . + . ID=Thaps41403.4;Parent=Thaps41403;constitutive=1;rank=4 chr7 . exon 1565201 1565440 . + . ID=Thaps41403.5;Parent=Thaps41403;constitutive=1;rank=5 chr7 . exon 1565527 1565930 . + . ID=Thaps41403.6;Parent=Thaps41403;constitutive=1;ensembl_end_phase=2;rank=6 chr7 ensembl protein_coding_gene 1569363 1570925 . - . ID=Thaps7206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNM7];external_name=Thaps7206;logic_name=jgi_thaps3 chr7 ensembl transcript 1569363 1570925 . - . ID=Thaps7206;Parent=Thaps7206;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1569363 1570925 . - 0 ID=Thaps7206;Parent=Thaps7206;rank=1 chr7 . exon 1569363 1570925 . - . ID=Thaps7206.1;Parent=Thaps7206;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1571339 1572306 . - . ID=Thaps7207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNM8];external_name=Thaps7207;logic_name=jgi_thaps3 chr7 ensembl transcript 1571339 1572306 . - . ID=Thaps7207;Parent=Thaps7207;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1571339 1571973 . - 0 ID=Thaps7207;Parent=Thaps7207;rank=2 chr7 . exon 1571339 1571973 . - . ID=Thaps7207.2;Parent=Thaps7207;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1572066 1572306 . - 0 ID=Thaps7207;Parent=Thaps7207;rank=1 chr7 . exon 1572066 1572306 . - . ID=Thaps7207.1;Parent=Thaps7207;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1572517 1573172 . + . ID=Thaps7208;biotype=protein_coding;description=Rab-type small GTPase [Source:UniProtKB/TrEMBL%3BAcc:B5YNM9];external_name=Thaps7208;logic_name=jgi_thaps3 chr7 ensembl transcript 1572517 1573172 . + . ID=Thaps7208;Parent=Thaps7208;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1572517 1572579 . + 0 ID=Thaps7208;Parent=Thaps7208;rank=1 chr7 . exon 1572517 1572579 . + . ID=Thaps7208.1;Parent=Thaps7208;constitutive=1;rank=1 chr7 . CDS 1572654 1573172 . + 0 ID=Thaps7208;Parent=Thaps7208;rank=2 chr7 . exon 1572654 1573172 . + . ID=Thaps7208.2;Parent=Thaps7208;constitutive=1;rank=2 chr7 . repeat_region 1578058 1578077 . ? . description=dust chr7 ensembl protein_coding_gene 1578353 1585386 . - . ID=Thaps23582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNN2];external_name=Thaps23582;logic_name=jgi_thaps3 chr7 ensembl transcript 1578353 1585386 . - . ID=Thaps23582;Parent=Thaps23582;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1578353 1580947 . - 0 ID=Thaps23582;Parent=Thaps23582;rank=4 chr7 . exon 1578353 1580947 . - . ID=Thaps23582.4;Parent=Thaps23582;constitutive=1;rank=4 chr7 . CDS 1581012 1581312 . - 0 ID=Thaps23582;Parent=Thaps23582;rank=3 chr7 . exon 1581012 1581312 . - . ID=Thaps23582.3;Parent=Thaps23582;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1581400 1581925 . - 0 ID=Thaps23582;Parent=Thaps23582;rank=2 chr7 . exon 1581400 1581925 . - . ID=Thaps23582.2;Parent=Thaps23582;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1582020 1585386 . - 0 ID=Thaps23582;Parent=Thaps23582;rank=1 chr7 . exon 1582020 1585386 . - . ID=Thaps23582.1;Parent=Thaps23582;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . exon 1574638 1575383 . - . ID=Thaps29008.3;Parent=Thaps29008;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 1575495 1575896 . - . ID=Thaps29008.2;Parent=Thaps29008;constitutive=1;rank=2 chr7 . exon 1575972 1576344 . - . ID=Thaps29008.1;Parent=Thaps29008;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1577075 1578196 . + . ID=Thaps35639;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNN1];external_name=Thaps35639;logic_name=jgi_thaps3 chr7 ensembl transcript 1577075 1578196 . + . ID=Thaps35639;Parent=Thaps35639;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1577075 1577164 . + 0 ID=Thaps35639;Parent=Thaps35639;rank=1 chr7 . exon 1577075 1577164 . + . ID=Thaps35639.1;Parent=Thaps35639;constitutive=1;rank=1 chr7 . CDS 1577258 1578033 . + 0 ID=Thaps35639;Parent=Thaps35639;rank=2 chr7 . exon 1577258 1578033 . + . ID=Thaps35639.2;Parent=Thaps35639;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1578106 1578196 . + 0 ID=Thaps35639;Parent=Thaps35639;rank=3 chr7 . exon 1578106 1578196 . + . ID=Thaps35639.3;Parent=Thaps35639;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . repeat_region 1585839 1585869 . ? . description=trf chr7 ensembl protein_coding_gene 1587817 1588230 . + . ID=Thaps19094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNN3];external_name=Thaps19094;logic_name=jgi_thaps3 chr7 ensembl transcript 1587817 1588230 . + . ID=Thaps19094;Parent=Thaps19094;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1587817 1588230 . + 0 ID=Thaps19094;Parent=Thaps19094;rank=1 chr7 . exon 1587817 1588230 . + . ID=Thaps19094.1;Parent=Thaps19094;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1590556 1590897 . + . ID=Thaps35356;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNN4];external_name=Thaps35356;logic_name=jgi_thaps3 chr7 ensembl transcript 1590556 1590897 . + . ID=Thaps35356;Parent=Thaps35356;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1590556 1590897 . + 0 ID=Thaps35356;Parent=Thaps35356;rank=1 chr7 . exon 1590556 1590897 . + . ID=Thaps35356.1;Parent=Thaps35356;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1592605 1594045 . - . ID=Thaps7213;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNN5];external_name=Thaps7213;logic_name=jgi_thaps3 chr7 ensembl transcript 1592605 1594045 . - . ID=Thaps7213;Parent=Thaps7213;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1592605 1593440 . - 0 ID=Thaps7213;Parent=Thaps7213;rank=2 chr7 . exon 1592605 1593440 . - . ID=Thaps7213.2;Parent=Thaps7213;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1593529 1594045 . - 0 ID=Thaps7213;Parent=Thaps7213;rank=1 chr7 . exon 1593529 1594045 . - . ID=Thaps7213.1;Parent=Thaps7213;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 1595172 1595220 . ? . description=dust chr7 ensembl protein_coding_gene 1594579 1595163 . - . ID=Thaps23584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNN6];external_name=Thaps23584;logic_name=jgi_thaps3 chr7 ensembl transcript 1594579 1595163 . - . ID=Thaps23584;Parent=Thaps23584;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1594579 1595163 . - 0 ID=Thaps23584;Parent=Thaps23584;rank=1 chr7 . exon 1594579 1595163 . - . ID=Thaps23584.1;Parent=Thaps23584;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1595732 1597673 . + . ID=Thaps29013;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNN7];external_name=Thaps29013;logic_name=jgi_thaps3 chr7 ensembl transcript 1595732 1597673 . + . ID=Thaps29013;Parent=Thaps29013;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1595732 1596107 . + 0 ID=Thaps29013;Parent=Thaps29013;rank=1 chr7 . exon 1595732 1596107 . + . ID=Thaps29013.1;Parent=Thaps29013;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1596246 1596556 . + 0 ID=Thaps29013;Parent=Thaps29013;rank=2 chr7 . exon 1596246 1596556 . + . ID=Thaps29013.2;Parent=Thaps29013;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1596682 1596799 . + 0 ID=Thaps29013;Parent=Thaps29013;rank=3 chr7 . exon 1596682 1596799 . + . ID=Thaps29013.3;Parent=Thaps29013;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1596880 1597673 . + 0 ID=Thaps29013;Parent=Thaps29013;rank=4 chr7 . exon 1596880 1597673 . + . ID=Thaps29013.4;Parent=Thaps29013;constitutive=1;ensembl_end_phase=2;rank=4 chr7 ensembl protein_coding_gene 1597783 1599150 . - . ID=Thaps7216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNN8];external_name=Thaps7216;logic_name=jgi_thaps3 chr7 ensembl transcript 1597783 1599150 . - . ID=Thaps7216;Parent=Thaps7216;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1597783 1599150 . - 0 ID=Thaps7216;Parent=Thaps7216;rank=1 chr7 . exon 1597783 1599150 . - . ID=Thaps7216.1;Parent=Thaps7216;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1599380 1609537 . - . ID=Thaps7217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNN9];external_name=Thaps7217;logic_name=jgi_thaps3 chr7 ensembl transcript 1599380 1609537 . - . ID=Thaps7217;Parent=Thaps7217;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1599380 1600279 . - 0 ID=Thaps7217;Parent=Thaps7217;rank=6 chr7 . exon 1599380 1600279 . - . ID=Thaps7217.6;Parent=Thaps7217;constitutive=1;rank=6 chr7 . CDS 1600355 1600517 . - 0 ID=Thaps7217;Parent=Thaps7217;rank=5 chr7 . exon 1600355 1600517 . - . ID=Thaps7217.5;Parent=Thaps7217;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 1600702 1603241 . - 0 ID=Thaps7217;Parent=Thaps7217;rank=4 chr7 . exon 1600702 1603241 . - . ID=Thaps7217.4;Parent=Thaps7217;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1603328 1603812 . - 0 ID=Thaps7217;Parent=Thaps7217;rank=3 chr7 . exon 1603328 1603812 . - . ID=Thaps7217.3;Parent=Thaps7217;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1603908 1606505 . - 0 ID=Thaps7217;Parent=Thaps7217;rank=2 chr7 . exon 1603908 1606505 . - . ID=Thaps7217.2;Parent=Thaps7217;constitutive=1;rank=2 chr7 . CDS 1606525 1609537 . - 0 ID=Thaps7217;Parent=Thaps7217;rank=1 chr7 . repeat_region 1608752 1608794 . ? . description=trf chr7 . repeat_region 1610835 1610854 . ? . description=trf chr7 . repeat_region 1610902 1610928 . ? . description=trf chr7 . repeat_region 1613768 1613788 . ? . description=trf chr7 ensembl protein_coding_gene 1609911 1613153 . + . ID=Thaps23586;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNP0];external_name=Thaps23586;logic_name=jgi_thaps3 chr7 ensembl transcript 1609911 1613153 . + . ID=Thaps23586;Parent=Thaps23586;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1609911 1613153 . + 0 ID=Thaps23586;Parent=Thaps23586;rank=1 chr7 . exon 1609911 1613153 . + . ID=Thaps23586.1;Parent=Thaps23586;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1613257 1629156 . - . ID=Thaps23587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNP1];external_name=Thaps23587;logic_name=jgi_thaps3 chr7 ensembl transcript 1613257 1629156 . - . ID=Thaps23587;Parent=Thaps23587;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1613257 1613726 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=14 chr7 . exon 1613257 1613726 . - . ID=Thaps23587.14;Parent=Thaps23587;constitutive=1;ensembl_end_phase=2;rank=14 chr7 . CDS 1613836 1614525 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=13 chr7 . exon 1613836 1614525 . - . ID=Thaps23587.13;Parent=Thaps23587;constitutive=1;rank=13 chr7 . CDS 1614603 1616435 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=12 chr7 . CDS 1616599 1616911 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=11 chr7 . CDS 1617015 1617108 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=10 chr7 . CDS 1617185 1617817 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=9 chr7 . CDS 1617892 1619965 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=8 chr7 . CDS 1620053 1621165 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=7 chr7 . CDS 1621418 1621614 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=6 chr7 . CDS 1621777 1622049 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=5 chr7 . CDS 1622127 1622809 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=4 chr7 . CDS 1622884 1623437 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=3 chr7 . CDS 1623522 1628764 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=2 chr7 . CDS 1629005 1629156 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=1 chr7 . exon 1606525 1609537 . - . ID=Thaps7217.1;Parent=Thaps7217;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . exon 1614603 1616435 . - . ID=Thaps23587.12;Parent=Thaps23587;constitutive=1;rank=12 chr7 . exon 1616599 1616911 . - . ID=Thaps23587.11;Parent=Thaps23587;constitutive=1;ensembl_end_phase=1;rank=11 chr7 . exon 1617015 1617108 . - . ID=Thaps23587.10;Parent=Thaps23587;constitutive=1;ensembl_end_phase=1;rank=10 chr7 . exon 1617185 1617817 . - . ID=Thaps23587.9;Parent=Thaps23587;constitutive=1;rank=9 chr7 . exon 1617892 1619965 . - . ID=Thaps23587.8;Parent=Thaps23587;constitutive=1;ensembl_end_phase=1;rank=8 chr7 . exon 1620053 1621165 . - . ID=Thaps23587.7;Parent=Thaps23587;constitutive=1;rank=7 chr7 . exon 1621418 1621614 . - . ID=Thaps23587.6;Parent=Thaps23587;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . exon 1621777 1622049 . - . ID=Thaps23587.5;Parent=Thaps23587;constitutive=1;rank=5 chr7 . exon 1622127 1622809 . - . ID=Thaps23587.4;Parent=Thaps23587;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . exon 1622884 1623437 . - . ID=Thaps23587.3;Parent=Thaps23587;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 1623522 1628764 . - . ID=Thaps23587.2;Parent=Thaps23587;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . repeat_region 1626785 1626804 . ? . description=trf chr7 . repeat_region 1627150 1627168 . ? . description=dust chr7 . repeat_region 1630102 1630146 . ? . description=dust chr7 . repeat_region 1631349 1631378 . ? . description=trf chr7 . repeat_region 1633287 1633309 . ? . description=trf chr7 . repeat_region 1633522 1633585 . ? . description=dust chr7 ensembl protein_coding_gene 1613257 1629156 . - . ID=Thaps23587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNP1];external_name=Thaps23587;logic_name=jgi_thaps3 chr7 ensembl transcript 1613257 1629156 . - . ID=Thaps23587;Parent=Thaps23587;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1613257 1613726 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=14 chr7 . CDS 1613836 1614525 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=13 chr7 . CDS 1614603 1616435 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=12 chr7 . CDS 1616599 1616911 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=11 chr7 . CDS 1617015 1617108 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=10 chr7 . CDS 1617185 1617817 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=9 chr7 . CDS 1617892 1619965 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=8 chr7 . CDS 1620053 1621165 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=7 chr7 . CDS 1621418 1621614 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=6 chr7 . CDS 1621777 1622049 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=5 chr7 . CDS 1622127 1622809 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=4 chr7 . CDS 1622884 1623437 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=3 chr7 . CDS 1623522 1628764 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=2 chr7 . CDS 1629005 1629156 . - 0 ID=Thaps23587;Parent=Thaps23587;rank=1 chr7 . exon 1629005 1629156 . - . ID=Thaps23587.1;Parent=Thaps23587;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1633561 1634328 . + . ID=Thaps263266;biotype=protein_coding;description=Demethylmenaquinone methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B5YNP4];external_name=Thaps263266;logic_name=jgi_thaps3 chr7 ensembl transcript 1633561 1634328 . + . ID=Thaps263266;Parent=Thaps263266;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1633561 1633750 . + 0 ID=Thaps263266;Parent=Thaps263266;rank=1 chr7 . exon 1633561 1633750 . + . ID=Thaps263266.1;Parent=Thaps263266;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1633854 1634131 . + 0 ID=Thaps263266;Parent=Thaps263266;rank=2 chr7 . exon 1633854 1634131 . + . ID=Thaps263266.2;Parent=Thaps263266;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1634261 1634328 . + 0 ID=Thaps263266;Parent=Thaps263266;rank=3 chr7 ensembl protein_coding_gene 1631087 1633264 . - . ID=Thaps29018;biotype=protein_coding;description=Nonsense mediated decay protein 3-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNP3];external_name=Thaps29018;logic_name=jgi_thaps3 chr7 ensembl transcript 1631087 1633264 . - . ID=Thaps29018;Parent=Thaps29018;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1631087 1631828 . - 0 ID=Thaps29018;Parent=Thaps29018;rank=4 chr7 . exon 1631087 1631828 . - . ID=Thaps29018.4;Parent=Thaps29018;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1631859 1632196 . - 0 ID=Thaps29018;Parent=Thaps29018;rank=3 chr7 . exon 1631859 1632196 . - . ID=Thaps29018.3;Parent=Thaps29018;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1632304 1632627 . - 0 ID=Thaps29018;Parent=Thaps29018;rank=2 chr7 . exon 1632304 1632627 . - . ID=Thaps29018.2;Parent=Thaps29018;constitutive=1;rank=2 chr7 . CDS 1632872 1633264 . - 0 ID=Thaps29018;Parent=Thaps29018;rank=1 chr7 . exon 1632872 1633264 . - . ID=Thaps29018.1;Parent=Thaps29018;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1629504 1630925 . + . ID=Thaps7220;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNP2];external_name=Thaps7220;logic_name=jgi_thaps3 chr7 ensembl transcript 1629504 1630925 . + . ID=Thaps7220;Parent=Thaps7220;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1629504 1630925 . + 0 ID=Thaps7220;Parent=Thaps7220;rank=1 chr7 . exon 1629504 1630925 . + . ID=Thaps7220.1;Parent=Thaps7220;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1640225 1642177 . + . ID=Thaps23592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNP7];external_name=Thaps23592;logic_name=jgi_thaps3 chr7 ensembl transcript 1640225 1642177 . + . ID=Thaps23592;Parent=Thaps23592;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1640225 1642045 . + 0 ID=Thaps23592;Parent=Thaps23592;rank=1 chr7 . exon 1640225 1642045 . + . ID=Thaps23592.1;Parent=Thaps23592;constitutive=1;rank=1 chr7 . CDS 1642130 1642177 . + 0 ID=Thaps23592;Parent=Thaps23592;rank=2 chr7 . exon 1642130 1642177 . + . ID=Thaps23592.2;Parent=Thaps23592;constitutive=1;rank=2 chr7 . exon 1634261 1634328 . + . ID=Thaps263266.3;Parent=Thaps263266;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1637217 1638791 . + . ID=Thaps263268;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNP6];external_name=Thaps263268;logic_name=jgi_thaps3 chr7 ensembl transcript 1637217 1638791 . + . ID=Thaps263268;Parent=Thaps263268;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1637217 1637281 . + 0 ID=Thaps263268;Parent=Thaps263268;rank=1 chr7 . exon 1637217 1637281 . + . ID=Thaps263268.1;Parent=Thaps263268;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1637525 1637716 . + 0 ID=Thaps263268;Parent=Thaps263268;rank=2 chr7 . exon 1637525 1637716 . + . ID=Thaps263268.2;Parent=Thaps263268;constitutive=1;rank=2 chr7 . CDS 1637825 1637979 . + 0 ID=Thaps263268;Parent=Thaps263268;rank=3 chr7 . exon 1637825 1637979 . + . ID=Thaps263268.3;Parent=Thaps263268;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1638016 1638299 . + 0 ID=Thaps263268;Parent=Thaps263268;rank=4 chr7 . exon 1638016 1638299 . + . ID=Thaps263268.4;Parent=Thaps263268;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1638345 1638791 . + 0 ID=Thaps263268;Parent=Thaps263268;rank=5 chr7 . exon 1638345 1638791 . + . ID=Thaps263268.5;Parent=Thaps263268;constitutive=1;rank=5 chr7 ensembl gene 1642471 1643148 . - . ID=Thaps263269;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 1642471 1643148 . - . ID=Thaps263269;Parent=Thaps263269;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 1642471 1643148 . - . ID=Thaps263269.1;Parent=Thaps263269;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1634928 1635473 . - . ID=Thaps41419;biotype=protein_coding;description=RT4%2C ribosomal protein 4%2C mitochondrial large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YNP5];external_name=RT4;logic_name=jgi_thaps3 chr7 ensembl transcript 1634928 1635473 . - . ID=Thaps41419;Parent=Thaps41419;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1634928 1635473 . - 0 ID=Thaps41419;Parent=Thaps41419;rank=1 chr7 . exon 1634928 1635473 . - . ID=Thaps41419.1;Parent=Thaps41419;constitutive=1;rank=1 chr7 . repeat_region 1644423 1644443 . ? . description=trf chr7 . repeat_region 1644423 1644443 . ? . description=dust chr7 . repeat_region 1644782 1644802 . ? . description=trf chr7 . repeat_region 1645122 1645129 . ? . description=dust chr7 . repeat_region 1646514 1646567 . ? . description=dust chr7 . repeat_region 1646991 1647021 . ? . description=trf chr7 . repeat_region 1646991 1647021 . ? . description=dust chr7 ensembl protein_coding_gene 1647292 1648545 . + . ID=Thaps23593;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNP9];external_name=Thaps23593;logic_name=jgi_thaps3 chr7 ensembl transcript 1647292 1648545 . + . ID=Thaps23593;Parent=Thaps23593;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1647292 1647522 . + 0 ID=Thaps23593;Parent=Thaps23593;rank=1 chr7 . exon 1647292 1647522 . + . ID=Thaps23593.1;Parent=Thaps23593;constitutive=1;rank=1 chr7 . CDS 1647823 1647912 . + 0 ID=Thaps23593;Parent=Thaps23593;rank=2 chr7 . exon 1647823 1647912 . + . ID=Thaps23593.2;Parent=Thaps23593;constitutive=1;rank=2 chr7 . CDS 1648081 1648545 . + 0 ID=Thaps23593;Parent=Thaps23593;rank=3 chr7 . exon 1648081 1648545 . + . ID=Thaps23593.3;Parent=Thaps23593;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1652386 1654607 . + . ID=Thaps23596;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ3];external_name=Thaps23596;logic_name=jgi_thaps3 chr7 ensembl transcript 1652386 1654607 . + . ID=Thaps23596;Parent=Thaps23596;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1652386 1653158 . + 0 ID=Thaps23596;Parent=Thaps23596;rank=1 chr7 . exon 1652386 1653158 . + . ID=Thaps23596.1;Parent=Thaps23596;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1653531 1653657 . + 0 ID=Thaps23596;Parent=Thaps23596;rank=2 chr7 . exon 1653531 1653657 . + . ID=Thaps23596.2;Parent=Thaps23596;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1653766 1653846 . + 0 ID=Thaps23596;Parent=Thaps23596;rank=3 chr7 . exon 1653766 1653846 . + . ID=Thaps23596.3;Parent=Thaps23596;constitutive=1;rank=3 chr7 . CDS 1653921 1654607 . + 0 ID=Thaps23596;Parent=Thaps23596;rank=4 chr7 ensembl protein_coding_gene 1645381 1645947 . + . ID=Thaps7227;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNP8];external_name=Thaps7227;logic_name=jgi_thaps3 chr7 ensembl transcript 1645381 1645947 . + . ID=Thaps7227;Parent=Thaps7227;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1645381 1645947 . + 0 ID=Thaps7227;Parent=Thaps7227;rank=1 chr7 . exon 1645381 1645947 . + . ID=Thaps7227.1;Parent=Thaps7227;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1648666 1649850 . + . ID=Thaps7229;biotype=protein_coding;description=Triosephosphate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ0];external_name=TPI;logic_name=jgi_thaps3 chr7 ensembl transcript 1648666 1649850 . + . ID=Thaps7229;Parent=Thaps7229;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1648666 1648673 . + 0 ID=Thaps7229;Parent=Thaps7229;rank=1 chr7 . exon 1648666 1648673 . + . ID=Thaps7229.1;Parent=Thaps7229;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1649013 1649850 . + 0 ID=Thaps7229;Parent=Thaps7229;rank=2 chr7 . exon 1649013 1649850 . + . ID=Thaps7229.2;Parent=Thaps7229;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 1650204 1650977 . + . ID=Thaps7230;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ1];external_name=Thaps7230;logic_name=jgi_thaps3 chr7 ensembl transcript 1650204 1650977 . + . ID=Thaps7230;Parent=Thaps7230;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1650204 1650977 . + 0 ID=Thaps7230;Parent=Thaps7230;rank=1 chr7 . exon 1650204 1650977 . + . ID=Thaps7230.1;Parent=Thaps7230;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1651116 1652261 . - . ID=Thaps7231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ2];external_name=Thaps7231;logic_name=jgi_thaps3 chr7 ensembl transcript 1651116 1652261 . - . ID=Thaps7231;Parent=Thaps7231;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1651116 1652261 . - 0 ID=Thaps7231;Parent=Thaps7231;rank=1 chr7 . exon 1651116 1652261 . - . ID=Thaps7231.1;Parent=Thaps7231;constitutive=1;rank=1 chr7 . exon 1653921 1654607 . + . ID=Thaps23596.4;Parent=Thaps23596;constitutive=1;rank=4 chr7 ensembl protein_coding_gene 1656226 1656771 . + . ID=Thaps23597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ5];external_name=Thaps23597;logic_name=jgi_thaps3 chr7 ensembl transcript 1656226 1656771 . + . ID=Thaps23597;Parent=Thaps23597;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1656226 1656276 . + 0 ID=Thaps23597;Parent=Thaps23597;rank=1 chr7 . exon 1656226 1656276 . + . ID=Thaps23597.1;Parent=Thaps23597;constitutive=1;rank=1 chr7 . CDS 1656337 1656414 . + 0 ID=Thaps23597;Parent=Thaps23597;rank=2 chr7 . exon 1656337 1656414 . + . ID=Thaps23597.2;Parent=Thaps23597;constitutive=1;rank=2 chr7 . CDS 1656526 1656771 . + 0 ID=Thaps23597;Parent=Thaps23597;rank=3 chr7 . exon 1656526 1656771 . + . ID=Thaps23597.3;Parent=Thaps23597;constitutive=1;rank=3 chr7 ensembl gene 1661065 1662983 . + . ID=Thaps263271;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 1661065 1662983 . + . ID=Thaps263271;Parent=Thaps263271;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 1661065 1661140 . + . ID=Thaps263271.1;Parent=Thaps263271;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . exon 1661234 1661869 . + . ID=Thaps263271.2;Parent=Thaps263271;constitutive=1;rank=2 chr7 . exon 1661992 1662071 . + . ID=Thaps263271.3;Parent=Thaps263271;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 1662152 1662223 . + . ID=Thaps263271.4;Parent=Thaps263271;constitutive=1;rank=4 chr7 . exon 1662304 1662397 . + . ID=Thaps263271.5;Parent=Thaps263271;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . exon 1662478 1662629 . + . ID=Thaps263271.6;Parent=Thaps263271;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . exon 1662695 1662805 . + . ID=Thaps263271.7;Parent=Thaps263271;constitutive=1;rank=7 chr7 . exon 1662904 1662983 . + . ID=Thaps263271.8;Parent=Thaps263271;constitutive=1;ensembl_end_phase=2;rank=8 chr7 ensembl protein_coding_gene 1655008 1655897 . + . ID=Thaps7233;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ4];external_name=Thaps7233;logic_name=jgi_thaps3 chr7 ensembl transcript 1655008 1655897 . + . ID=Thaps7233;Parent=Thaps7233;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1655008 1655085 . + 0 ID=Thaps7233;Parent=Thaps7233;rank=1 chr7 . exon 1655008 1655085 . + . ID=Thaps7233.1;Parent=Thaps7233;constitutive=1;rank=1 chr7 . CDS 1655235 1655897 . + 0 ID=Thaps7233;Parent=Thaps7233;rank=2 chr7 . exon 1655235 1655897 . + . ID=Thaps7233.2;Parent=Thaps7233;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1663809 1664696 . - . ID=Thaps7236;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ6];external_name=Thaps7236;logic_name=jgi_thaps3 chr7 ensembl transcript 1663809 1664696 . - . ID=Thaps7236;Parent=Thaps7236;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1663809 1664696 . - 0 ID=Thaps7236;Parent=Thaps7236;rank=1 chr7 . exon 1663809 1664696 . - . ID=Thaps7236.1;Parent=Thaps7236;constitutive=1;rank=1 chr7 . repeat_region 1663874 1663910 . ? . description=dust chr7 . repeat_region 1664740 1664775 . ? . description=trf chr7 . repeat_region 1665336 1665513 . ? . description=trf chr7 . repeat_region 1665344 1665470 . ? . description=trf chr7 . repeat_region 1666123 1666130 . ? . description=dust chr7 ensembl protein_coding_gene 1666147 1670368 . - . ID=Thaps23598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ8];external_name=Thaps23598;logic_name=jgi_thaps3 chr7 ensembl transcript 1666147 1670368 . - . ID=Thaps23598;Parent=Thaps23598;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1666147 1666408 . - 0 ID=Thaps23598;Parent=Thaps23598;rank=3 chr7 . exon 1666147 1666408 . - . ID=Thaps23598.3;Parent=Thaps23598;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1666495 1666632 . - 0 ID=Thaps23598;Parent=Thaps23598;rank=2 chr7 . exon 1666495 1666632 . - . ID=Thaps23598.2;Parent=Thaps23598;constitutive=1;rank=2 chr7 . CDS 1666725 1670368 . - 0 ID=Thaps23598;Parent=Thaps23598;rank=1 chr7 . exon 1666725 1670368 . - . ID=Thaps23598.1;Parent=Thaps23598;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1664987 1665886 . + . ID=Thaps7237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ7];external_name=Thaps7237;logic_name=jgi_thaps3 chr7 ensembl transcript 1664987 1665886 . + . ID=Thaps7237;Parent=Thaps7237;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1664987 1665886 . + 0 ID=Thaps7237;Parent=Thaps7237;rank=1 chr7 . exon 1664987 1665886 . + . ID=Thaps7237.1;Parent=Thaps7237;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1670958 1671626 . + . ID=Thaps7239;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNQ9];external_name=Thaps7239;logic_name=jgi_thaps3 chr7 ensembl transcript 1670958 1671626 . + . ID=Thaps7239;Parent=Thaps7239;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1670958 1671626 . + 0 ID=Thaps7239;Parent=Thaps7239;rank=1 chr7 . exon 1670958 1671626 . + . ID=Thaps7239.1;Parent=Thaps7239;constitutive=1;rank=1 chr7 . repeat_region 1676946 1677006 . - . description=Harbinger2N_TP chr7 ensembl protein_coding_gene 1675500 1677201 . + . ID=Thaps23599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNR0];external_name=Thaps23599;logic_name=jgi_thaps3 chr7 ensembl transcript 1675500 1677201 . + . ID=Thaps23599;Parent=Thaps23599;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1675500 1676325 . + 0 ID=Thaps23599;Parent=Thaps23599;rank=1 chr7 . exon 1675500 1676325 . + . ID=Thaps23599.1;Parent=Thaps23599;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1676436 1677140 . + 0 ID=Thaps23599;Parent=Thaps23599;rank=2 chr7 . exon 1676436 1677140 . + . ID=Thaps23599.2;Parent=Thaps23599;constitutive=1;rank=2 chr7 . CDS 1677164 1677201 . + 0 ID=Thaps23599;Parent=Thaps23599;rank=3 chr7 . exon 1677164 1677201 . + . ID=Thaps23599.3;Parent=Thaps23599;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1679841 1682099 . + . ID=Thaps23601;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNR3];external_name=Thaps23601;logic_name=jgi_thaps3 chr7 ensembl transcript 1679841 1682099 . + . ID=Thaps23601;Parent=Thaps23601;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1679841 1682099 . + 0 ID=Thaps23601;Parent=Thaps23601;rank=1 chr7 . exon 1679841 1682099 . + . ID=Thaps23601.1;Parent=Thaps23601;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1678873 1679406 . - . ID=Thaps35685;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNR2];external_name=Thaps35685;logic_name=jgi_thaps3 chr7 ensembl transcript 1678873 1679406 . - . ID=Thaps35685;Parent=Thaps35685;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1678873 1679030 . - 0 ID=Thaps35685;Parent=Thaps35685;rank=2 chr7 . exon 1678873 1679030 . - . ID=Thaps35685.2;Parent=Thaps35685;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1679094 1679406 . - 0 ID=Thaps35685;Parent=Thaps35685;rank=1 chr7 . exon 1679094 1679406 . - . ID=Thaps35685.1;Parent=Thaps35685;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1677476 1678600 . - . ID=Thaps41425;biotype=protein_coding;description=Cytosolic malate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B5YNR1];external_name=Thaps41425;logic_name=jgi_thaps3 chr7 ensembl transcript 1677476 1678600 . - . ID=Thaps41425;Parent=Thaps41425;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1677476 1678600 . - 0 ID=Thaps41425;Parent=Thaps41425;rank=1 chr7 . exon 1677476 1678600 . - . ID=Thaps41425.1;Parent=Thaps41425;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1682156 1684483 . - . ID=Thaps7244;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNR4];external_name=Thaps7244;logic_name=jgi_thaps3 chr7 ensembl transcript 1682156 1684483 . - . ID=Thaps7244;Parent=Thaps7244;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1682156 1684483 . - 0 ID=Thaps7244;Parent=Thaps7244;rank=1 chr7 . exon 1682156 1684483 . - . ID=Thaps7244.1;Parent=Thaps7244;constitutive=1;rank=1 chr7 . repeat_region 1685557 1685668 . ? . description=trf chr7 ensembl protein_coding_gene 1688194 1691478 . + . ID=Thaps23602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNR6];external_name=Thaps23602;logic_name=jgi_thaps3 chr7 ensembl transcript 1688194 1691478 . + . ID=Thaps23602;Parent=Thaps23602;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1688194 1691478 . + 0 ID=Thaps23602;Parent=Thaps23602;rank=1 chr7 . exon 1688194 1691478 . + . ID=Thaps23602.1;Parent=Thaps23602;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1693472 1695940 . + . ID=Thaps23603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNR8];external_name=Thaps23603;logic_name=jgi_thaps3 chr7 ensembl transcript 1693472 1695940 . + . ID=Thaps23603;Parent=Thaps23603;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1693472 1695940 . + 0 ID=Thaps23603;Parent=Thaps23603;rank=1 chr7 . exon 1693472 1695940 . + . ID=Thaps23603.1;Parent=Thaps23603;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1687405 1687854 . - . ID=Thaps7245;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNR5];external_name=Thaps7245;logic_name=jgi_thaps3 chr7 ensembl transcript 1687405 1687854 . - . ID=Thaps7245;Parent=Thaps7245;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1687405 1687854 . - 0 ID=Thaps7245;Parent=Thaps7245;rank=1 chr7 . exon 1687405 1687854 . - . ID=Thaps7245.1;Parent=Thaps7245;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1692175 1693000 . - . ID=Thaps7247;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNR7];external_name=Thaps7247;logic_name=jgi_thaps3 chr7 ensembl transcript 1692175 1693000 . - . ID=Thaps7247;Parent=Thaps7247;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1692175 1692219 . - 0 ID=Thaps7247;Parent=Thaps7247;rank=4 chr7 . exon 1692175 1692219 . - . ID=Thaps7247.4;Parent=Thaps7247;constitutive=1;rank=4 chr7 . CDS 1692312 1692354 . - 0 ID=Thaps7247;Parent=Thaps7247;rank=3 chr7 . exon 1692312 1692354 . - . ID=Thaps7247.3;Parent=Thaps7247;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1692423 1692756 . - 0 ID=Thaps7247;Parent=Thaps7247;rank=2 chr7 . exon 1692423 1692756 . - . ID=Thaps7247.2;Parent=Thaps7247;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1692835 1693000 . - 0 ID=Thaps7247;Parent=Thaps7247;rank=1 chr7 . exon 1692835 1693000 . - . ID=Thaps7247.1;Parent=Thaps7247;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 1697228 1697239 . ? . description=dust chr7 ensembl protein_coding_gene 1702512 1704229 . + . ID=Thaps23605;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNS3];external_name=Thaps23605;logic_name=jgi_thaps3 chr7 ensembl transcript 1702512 1704229 . + . ID=Thaps23605;Parent=Thaps23605;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1702512 1703412 . + 0 ID=Thaps23605;Parent=Thaps23605;rank=1 chr7 . exon 1702512 1703412 . + . ID=Thaps23605.1;Parent=Thaps23605;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1703484 1704229 . + 0 ID=Thaps23605;Parent=Thaps23605;rank=2 chr7 . exon 1703484 1704229 . + . ID=Thaps23605.2;Parent=Thaps23605;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 1696359 1697098 . - . ID=Thaps7249;biotype=protein_coding;description=ADP-ribosylation factor like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNR9];external_name=ARF5;logic_name=jgi_thaps3 chr7 ensembl transcript 1696359 1697098 . - . ID=Thaps7249;Parent=Thaps7249;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1696359 1696771 . - 0 ID=Thaps7249;Parent=Thaps7249;rank=2 chr7 . exon 1696359 1696771 . - . ID=Thaps7249.2;Parent=Thaps7249;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1696975 1697098 . - 0 ID=Thaps7249;Parent=Thaps7249;rank=1 chr7 . exon 1696975 1697098 . - . ID=Thaps7249.1;Parent=Thaps7249;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1697403 1698275 . + . ID=Thaps7250;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNS0];external_name=Thaps7250;logic_name=jgi_thaps3 chr7 ensembl transcript 1697403 1698275 . + . ID=Thaps7250;Parent=Thaps7250;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1697403 1698275 . + 0 ID=Thaps7250;Parent=Thaps7250;rank=1 chr7 . exon 1697403 1698275 . + . ID=Thaps7250.1;Parent=Thaps7250;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1698456 1699796 . - . ID=Thaps7251;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNS1];external_name=Thaps7251;logic_name=jgi_thaps3 chr7 ensembl transcript 1698456 1699796 . - . ID=Thaps7251;Parent=Thaps7251;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1698456 1699796 . - 0 ID=Thaps7251;Parent=Thaps7251;rank=1 chr7 . exon 1698456 1699796 . - . ID=Thaps7251.1;Parent=Thaps7251;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1701346 1702215 . - . ID=Thaps7253;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNS2];external_name=Thaps7253;logic_name=jgi_thaps3 chr7 ensembl transcript 1701346 1702215 . - . ID=Thaps7253;Parent=Thaps7253;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1701346 1702215 . - 0 ID=Thaps7253;Parent=Thaps7253;rank=1 chr7 . exon 1701346 1702215 . - . ID=Thaps7253.1;Parent=Thaps7253;constitutive=1;rank=1 chr7 . repeat_region 1704923 1704951 . ? . description=trf chr7 . repeat_region 1706786 1706807 . ? . description=trf chr7 . repeat_region 1709497 1709530 . ? . description=trf chr7 . repeat_region 1709499 1709526 . ? . description=trf chr7 ensembl protein_coding_gene 1704739 1710943 . - . ID=Thaps23606;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNS4];external_name=Thaps23606;logic_name=jgi_thaps3 chr7 ensembl transcript 1704739 1710943 . - . ID=Thaps23606;Parent=Thaps23606;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1704739 1705230 . - 0 ID=Thaps23606;Parent=Thaps23606;rank=6 chr7 . exon 1704739 1705230 . - . ID=Thaps23606.6;Parent=Thaps23606;constitutive=1;rank=6 chr7 . CDS 1705324 1707037 . - 0 ID=Thaps23606;Parent=Thaps23606;rank=5 chr7 . exon 1705324 1707037 . - . ID=Thaps23606.5;Parent=Thaps23606;constitutive=1;ensembl_end_phase=1;rank=5 chr7 . CDS 1707109 1707374 . - 0 ID=Thaps23606;Parent=Thaps23606;rank=4 chr7 . exon 1707109 1707374 . - . ID=Thaps23606.4;Parent=Thaps23606;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1707455 1708200 . - 0 ID=Thaps23606;Parent=Thaps23606;rank=3 chr7 . exon 1707455 1708200 . - . ID=Thaps23606.3;Parent=Thaps23606;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1708291 1709817 . - 0 ID=Thaps23606;Parent=Thaps23606;rank=2 chr7 . exon 1708291 1709817 . - . ID=Thaps23606.2;Parent=Thaps23606;constitutive=1;rank=2 chr7 . CDS 1709911 1710943 . - 0 ID=Thaps23606;Parent=Thaps23606;rank=1 chr7 . exon 1709911 1710943 . - . ID=Thaps23606.1;Parent=Thaps23606;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1711296 1714574 . - . ID=Thaps7256;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNS5];external_name=Thaps7256;logic_name=jgi_thaps3 chr7 ensembl transcript 1711296 1714574 . - . ID=Thaps7256;Parent=Thaps7256;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1711296 1711911 . - 0 ID=Thaps7256;Parent=Thaps7256;rank=3 chr7 . exon 1711296 1711911 . - . ID=Thaps7256.3;Parent=Thaps7256;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1711998 1712418 . - 0 ID=Thaps7256;Parent=Thaps7256;rank=2 chr7 . exon 1711998 1712418 . - . ID=Thaps7256.2;Parent=Thaps7256;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1712510 1714574 . - 0 ID=Thaps7256;Parent=Thaps7256;rank=1 chr7 . exon 1712510 1714574 . - . ID=Thaps7256.1;Parent=Thaps7256;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 1714545 1714567 . ? . description=dust chr7 . repeat_region 1715589 1715620 . ? . description=dust chr7 . repeat_region 1717906 1717933 . ? . description=dust chr7 ensembl protein_coding_gene 1715253 1716712 . + . ID=Thaps14719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNS6];external_name=Thaps14719;logic_name=jgi_thaps3 chr7 ensembl transcript 1715253 1716712 . + . ID=Thaps14719;Parent=Thaps14719;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1715253 1715527 . + 0 ID=Thaps14719;Parent=Thaps14719;rank=1 chr7 . exon 1715253 1715527 . + . ID=Thaps14719.1;Parent=Thaps14719;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1715646 1716164 . + 0 ID=Thaps14719;Parent=Thaps14719;rank=2 chr7 . exon 1715646 1716164 . + . ID=Thaps14719.2;Parent=Thaps14719;constitutive=1;rank=2 chr7 . CDS 1716241 1716712 . + 0 ID=Thaps14719;Parent=Thaps14719;rank=3 chr7 . exon 1716241 1716712 . + . ID=Thaps14719.3;Parent=Thaps14719;constitutive=1;ensembl_end_phase=1;rank=3 chr7 ensembl protein_coding_gene 1720234 1721169 . + . ID=Thaps17262;biotype=protein_coding;description=Glycosylase [Source:UniProtKB/TrEMBL%3BAcc:B5YNS8];external_name=OGG;logic_name=jgi_thaps3 chr7 ensembl transcript 1720234 1721169 . + . ID=Thaps17262;Parent=Thaps17262;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1720234 1720323 . + 0 ID=Thaps17262;Parent=Thaps17262;rank=1 chr7 . exon 1720234 1720323 . + . ID=Thaps17262.1;Parent=Thaps17262;constitutive=1;rank=1 chr7 . CDS 1720361 1720365 . + 0 ID=Thaps17262;Parent=Thaps17262;rank=2 chr7 . exon 1720361 1720365 . + . ID=Thaps17262.2;Parent=Thaps17262;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1720413 1721169 . + 0 ID=Thaps17262;Parent=Thaps17262;rank=3 chr7 . exon 1720413 1721169 . + . ID=Thaps17262.3;Parent=Thaps17262;constitutive=1;ensembl_end_phase=1;rank=3 chr7 ensembl protein_coding_gene 1717139 1718071 . - . ID=Thaps23607;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNS7];external_name=Thaps23607;logic_name=jgi_thaps3 chr7 ensembl transcript 1717139 1718071 . - . ID=Thaps23607;Parent=Thaps23607;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1717139 1718071 . - 0 ID=Thaps23607;Parent=Thaps23607;rank=1 chr7 . exon 1717139 1718071 . - . ID=Thaps23607.1;Parent=Thaps23607;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1722715 1723173 . - . ID=Thaps263277;biotype=protein_coding;description=Transmembrane protein with sterol-regulatory element binding domain [Source:UniProtKB/TrEMBL%3BAcc:B5YNS9];external_name=Thaps263277;logic_name=jgi_thaps3 chr7 ensembl transcript 1722715 1723173 . - . ID=Thaps263277;Parent=Thaps263277;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1722715 1723173 . - 0 ID=Thaps263277;Parent=Thaps263277;rank=1 chr7 . exon 1722715 1723173 . - . ID=Thaps263277.1;Parent=Thaps263277;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1732168 1733199 . - . ID=Thaps269297;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNT1];external_name=Thaps269297;logic_name=jgi_thaps3 chr7 ensembl transcript 1732168 1733199 . - . ID=Thaps269297;Parent=Thaps269297;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1732168 1732407 . - 0 ID=Thaps269297;Parent=Thaps269297;rank=4 chr7 . exon 1732168 1732407 . - . ID=Thaps269297.4;Parent=Thaps269297;constitutive=1;rank=4 chr7 . CDS 1732481 1732728 . - 0 ID=Thaps269297;Parent=Thaps269297;rank=3 chr7 . exon 1732481 1732728 . - . ID=Thaps269297.3;Parent=Thaps269297;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1732832 1733036 . - 0 ID=Thaps269297;Parent=Thaps269297;rank=2 chr7 . exon 1732832 1733036 . - . ID=Thaps269297.2;Parent=Thaps269297;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1733128 1733199 . - 0 ID=Thaps269297;Parent=Thaps269297;rank=1 chr7 . exon 1733128 1733199 . - . ID=Thaps269297.1;Parent=Thaps269297;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1724681 1727746 . + . ID=Thaps7261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNT0];external_name=Thaps7261;logic_name=jgi_thaps3 chr7 ensembl transcript 1724681 1727746 . + . ID=Thaps7261;Parent=Thaps7261;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1724681 1727746 . + 0 ID=Thaps7261;Parent=Thaps7261;rank=1 chr7 . exon 1724681 1727746 . + . ID=Thaps7261.1;Parent=Thaps7261;constitutive=1;rank=1 chr7 . repeat_region 1738821 1738846 . ? . description=dust chr7 ensembl protein_coding_gene 1736942 1737482 . + . ID=Thaps18954;biotype=protein_coding;description=Probable adenine phosphoribosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B5YNT3];external_name=APT2;logic_name=jgi_thaps3 chr7 ensembl transcript 1736942 1737482 . + . ID=Thaps18954;Parent=Thaps18954;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1736942 1737084 . + 0 ID=Thaps18954;Parent=Thaps18954;rank=1 chr7 . exon 1736942 1737084 . + . ID=Thaps18954.1;Parent=Thaps18954;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1737191 1737482 . + 0 ID=Thaps18954;Parent=Thaps18954;rank=2 chr7 . exon 1737191 1737482 . + . ID=Thaps18954.2;Parent=Thaps18954;constitutive=1;ensembl_end_phase=1;rank=2 chr7 ensembl protein_coding_gene 1741907 1742293 . + . ID=Thaps23614;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNT6];external_name=Thaps23614;logic_name=jgi_thaps3 chr7 ensembl transcript 1741907 1742293 . + . ID=Thaps23614;Parent=Thaps23614;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1741907 1742293 . + 0 ID=Thaps23614;Parent=Thaps23614;rank=1 chr7 . exon 1741907 1742293 . + . ID=Thaps23614.1;Parent=Thaps23614;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1740545 1741531 . - . ID=Thaps35390;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier protein] reductase [Source:UniProtKB/TrEMBL%3BAcc:B5YNT5];external_name=KAR3;logic_name=jgi_thaps3 chr7 ensembl transcript 1740545 1741531 . - . ID=Thaps35390;Parent=Thaps35390;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1740545 1740722 . - 0 ID=Thaps35390;Parent=Thaps35390;rank=3 chr7 . exon 1740545 1740722 . - . ID=Thaps35390.3;Parent=Thaps35390;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1740780 1741014 . - 0 ID=Thaps35390;Parent=Thaps35390;rank=2 chr7 . exon 1740780 1741014 . - . ID=Thaps35390.2;Parent=Thaps35390;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1741087 1741531 . - 0 ID=Thaps35390;Parent=Thaps35390;rank=1 chr7 . exon 1741087 1741531 . - . ID=Thaps35390.1;Parent=Thaps35390;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1734646 1736341 . - . ID=Thaps41433;biotype=protein_coding;description=Glutathione reductase [Source:UniProtKB/TrEMBL%3BAcc:B5YNT2];external_name=Thaps41433;logic_name=jgi_thaps3 chr7 ensembl transcript 1734646 1736341 . - . ID=Thaps41433;Parent=Thaps41433;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1734646 1735050 . - 0 ID=Thaps41433;Parent=Thaps41433;rank=4 chr7 . exon 1734646 1735050 . - . ID=Thaps41433.4;Parent=Thaps41433;constitutive=1;rank=4 chr7 . CDS 1735125 1735388 . - 0 ID=Thaps41433;Parent=Thaps41433;rank=3 chr7 . exon 1735125 1735388 . - . ID=Thaps41433.3;Parent=Thaps41433;constitutive=1;rank=3 chr7 . CDS 1735425 1736124 . - 0 ID=Thaps41433;Parent=Thaps41433;rank=2 chr7 . exon 1735425 1736124 . - . ID=Thaps41433.2;Parent=Thaps41433;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1736223 1736341 . - 0 ID=Thaps41433;Parent=Thaps41433;rank=1 chr7 . exon 1736223 1736341 . - . ID=Thaps41433.1;Parent=Thaps41433;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1737790 1740145 . - . ID=Thaps7265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNT4];external_name=Thaps7265;logic_name=jgi_thaps3 chr7 ensembl transcript 1737790 1740145 . - . ID=Thaps7265;Parent=Thaps7265;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1737790 1737825 . - 0 ID=Thaps7265;Parent=Thaps7265;rank=3 chr7 . exon 1737790 1737825 . - . ID=Thaps7265.3;Parent=Thaps7265;constitutive=1;rank=3 chr7 . CDS 1737870 1739828 . - 0 ID=Thaps7265;Parent=Thaps7265;rank=2 chr7 . exon 1737870 1739828 . - . ID=Thaps7265.2;Parent=Thaps7265;constitutive=1;rank=2 chr7 . CDS 1739972 1740145 . - 0 ID=Thaps7265;Parent=Thaps7265;rank=1 chr7 . exon 1739972 1740145 . - . ID=Thaps7265.1;Parent=Thaps7265;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1743467 1746906 . + . ID=Thaps7268;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNT7];external_name=Thaps7268;logic_name=jgi_thaps3 chr7 ensembl transcript 1743467 1746906 . + . ID=Thaps7268;Parent=Thaps7268;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1743467 1743988 . + 0 ID=Thaps7268;Parent=Thaps7268;rank=1 chr7 . exon 1743467 1743988 . + . ID=Thaps7268.1;Parent=Thaps7268;constitutive=1;rank=1 chr7 . CDS 1744081 1744411 . + 0 ID=Thaps7268;Parent=Thaps7268;rank=2 chr7 . CDS 1744514 1745731 . + 0 ID=Thaps7268;Parent=Thaps7268;rank=3 chr7 . CDS 1745814 1746452 . + 0 ID=Thaps7268;Parent=Thaps7268;rank=4 chr7 . CDS 1746527 1746906 . + 0 ID=Thaps7268;Parent=Thaps7268;rank=5 chr7 ensembl protein_coding_gene 1747025 1748607 . - . ID=Thaps23615;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNT8];external_name=Thaps23615;logic_name=jgi_thaps3 chr7 ensembl transcript 1747025 1748607 . - . ID=Thaps23615;Parent=Thaps23615;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1747025 1747281 . - 0 ID=Thaps23615;Parent=Thaps23615;rank=4 chr7 . exon 1747025 1747281 . - . ID=Thaps23615.4;Parent=Thaps23615;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1747363 1747923 . - 0 ID=Thaps23615;Parent=Thaps23615;rank=3 chr7 . exon 1747363 1747923 . - . ID=Thaps23615.3;Parent=Thaps23615;constitutive=1;rank=3 chr7 . CDS 1748062 1748139 . - 0 ID=Thaps23615;Parent=Thaps23615;rank=2 chr7 . exon 1748062 1748139 . - . ID=Thaps23615.2;Parent=Thaps23615;constitutive=1;rank=2 chr7 . CDS 1748244 1748607 . - 0 ID=Thaps23615;Parent=Thaps23615;rank=1 chr7 . exon 1748244 1748607 . - . ID=Thaps23615.1;Parent=Thaps23615;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1752735 1755785 . + . ID=Thaps23616;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNU1];external_name=Thaps23616;logic_name=jgi_thaps3 chr7 ensembl transcript 1752735 1755785 . + . ID=Thaps23616;Parent=Thaps23616;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1752735 1752846 . + 0 ID=Thaps23616;Parent=Thaps23616;rank=1 chr7 . exon 1752735 1752846 . + . ID=Thaps23616.1;Parent=Thaps23616;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1752990 1753922 . + 0 ID=Thaps23616;Parent=Thaps23616;rank=2 chr7 . exon 1752990 1753922 . + . ID=Thaps23616.2;Parent=Thaps23616;constitutive=1;rank=2 chr7 . CDS 1754050 1755785 . + 0 ID=Thaps23616;Parent=Thaps23616;rank=3 chr7 . exon 1744081 1744411 . + . ID=Thaps7268.2;Parent=Thaps7268;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . exon 1744514 1745731 . + . ID=Thaps7268.3;Parent=Thaps7268;constitutive=1;rank=3 chr7 . exon 1745814 1746452 . + . ID=Thaps7268.4;Parent=Thaps7268;constitutive=1;rank=4 chr7 . exon 1746527 1746906 . + . ID=Thaps7268.5;Parent=Thaps7268;constitutive=1;ensembl_end_phase=2;rank=5 chr7 ensembl protein_coding_gene 1749616 1751642 . + . ID=Thaps7270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNT9];external_name=Thaps7270;logic_name=jgi_thaps3 chr7 ensembl transcript 1749616 1751642 . + . ID=Thaps7270;Parent=Thaps7270;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1749616 1750100 . + 0 ID=Thaps7270;Parent=Thaps7270;rank=1 chr7 . exon 1749616 1750100 . + . ID=Thaps7270.1;Parent=Thaps7270;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1750260 1750512 . + 0 ID=Thaps7270;Parent=Thaps7270;rank=2 chr7 . exon 1750260 1750512 . + . ID=Thaps7270.2;Parent=Thaps7270;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1750620 1751642 . + 0 ID=Thaps7270;Parent=Thaps7270;rank=3 chr7 . exon 1750620 1751642 . + . ID=Thaps7270.3;Parent=Thaps7270;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1751901 1752611 . - . ID=Thaps7271;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNU0];external_name=Thaps7271;logic_name=jgi_thaps3 chr7 ensembl transcript 1751901 1752611 . - . ID=Thaps7271;Parent=Thaps7271;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1751901 1752611 . - 0 ID=Thaps7271;Parent=Thaps7271;rank=1 chr7 . exon 1751901 1752611 . - . ID=Thaps7271.1;Parent=Thaps7271;constitutive=1;rank=1 chr7 . repeat_region 1754366 1754392 . ? . description=trf chr7 . repeat_region 1754366 1754392 . ? . description=dust chr7 . exon 1754050 1755785 . + . ID=Thaps23616.3;Parent=Thaps23616;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1758070 1760184 . + . ID=Thaps23618;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNU2];external_name=Thaps23618;logic_name=jgi_thaps3 chr7 ensembl transcript 1758070 1760184 . + . ID=Thaps23618;Parent=Thaps23618;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1758070 1760184 . + 0 ID=Thaps23618;Parent=Thaps23618;rank=1 chr7 . exon 1758070 1760184 . + . ID=Thaps23618.1;Parent=Thaps23618;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1760296 1760781 . - . ID=Thaps35531;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNU3];external_name=Thaps35531;logic_name=jgi_thaps3 chr7 ensembl transcript 1760296 1760781 . - . ID=Thaps35531;Parent=Thaps35531;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1760296 1760781 . - 0 ID=Thaps35531;Parent=Thaps35531;rank=1 chr7 . exon 1760296 1760781 . - . ID=Thaps35531.1;Parent=Thaps35531;constitutive=1;rank=1 chr7 . biological_region 1765528 1765533 0.999 + . logic_name=eponine chr7 ensembl protein_coding_gene 1764319 1764500 . - . ID=Thaps263284;biotype=protein_coding;description=Zinc finger protein similarity%2C PHD motif%2C DNA binding%2C transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B5YNU4];external_name=ZFP10;logic_name=jgi_thaps3 chr7 ensembl transcript 1764319 1764500 . - . ID=Thaps263284;Parent=Thaps263284;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1764319 1764500 . - 0 ID=Thaps263284;Parent=Thaps263284;rank=1 chr7 . exon 1764319 1764500 . - . ID=Thaps263284.1;Parent=Thaps263284;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1770250 1778111 . + . ID=Thaps35342;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNU5];external_name=Thaps35342;logic_name=jgi_thaps3 chr7 ensembl transcript 1770250 1778111 . + . ID=Thaps35342;Parent=Thaps35342;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1770250 1771867 . + 0 ID=Thaps35342;Parent=Thaps35342;rank=1 chr7 . exon 1770250 1771867 . + . ID=Thaps35342.1;Parent=Thaps35342;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1771931 1772728 . + 0 ID=Thaps35342;Parent=Thaps35342;rank=2 chr7 . exon 1771931 1772728 . + . ID=Thaps35342.2;Parent=Thaps35342;constitutive=1;rank=2 chr7 . CDS 1772858 1774044 . + 0 ID=Thaps35342;Parent=Thaps35342;rank=3 chr7 . exon 1772858 1774044 . + . ID=Thaps35342.3;Parent=Thaps35342;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1774126 1776297 . + 0 ID=Thaps35342;Parent=Thaps35342;rank=4 chr7 . CDS 1776325 1776603 . + 0 ID=Thaps35342;Parent=Thaps35342;rank=5 chr7 . CDS 1776684 1777078 . + 0 ID=Thaps35342;Parent=Thaps35342;rank=6 chr7 . CDS 1777294 1777516 . + 0 ID=Thaps35342;Parent=Thaps35342;rank=7 chr7 . CDS 1777614 1778111 . + 0 ID=Thaps35342;Parent=Thaps35342;rank=8 chr7 . repeat_region 1781890 1781913 . ? . description=trf chr7 . repeat_region 1782124 1782149 . ? . description=trf chr7 . repeat_region 1782124 1782149 . ? . description=dust chr7 ensembl protein_coding_gene 1779453 1779887 . + . ID=Thaps18538;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNU6];external_name=Thaps18538;logic_name=jgi_thaps3 chr7 ensembl transcript 1779453 1779887 . + . ID=Thaps18538;Parent=Thaps18538;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1779453 1779887 . + 0 ID=Thaps18538;Parent=Thaps18538;rank=1 chr7 . exon 1779453 1779887 . + . ID=Thaps18538.1;Parent=Thaps18538;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1781954 1785849 . + . ID=Thaps35239;biotype=protein_coding;description=Spliceosome associated factor 3b%2C subunit 3%3B 130kD spliceosome associated protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNU8];external_name=Thaps35239;logic_name=jgi_thaps3 chr7 ensembl transcript 1781954 1785849 . + . ID=Thaps35239;Parent=Thaps35239;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1781954 1782113 . + 0 ID=Thaps35239;Parent=Thaps35239;rank=1 chr7 . exon 1781954 1782113 . + . ID=Thaps35239.1;Parent=Thaps35239;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1782203 1782456 . + 0 ID=Thaps35239;Parent=Thaps35239;rank=2 chr7 . exon 1782203 1782456 . + . ID=Thaps35239.2;Parent=Thaps35239;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1782496 1783112 . + 0 ID=Thaps35239;Parent=Thaps35239;rank=3 chr7 . exon 1782496 1783112 . + . ID=Thaps35239.3;Parent=Thaps35239;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1783152 1784535 . + 0 ID=Thaps35239;Parent=Thaps35239;rank=4 chr7 . exon 1783152 1784535 . + . ID=Thaps35239.4;Parent=Thaps35239;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1784626 1785849 . + 0 ID=Thaps35239;Parent=Thaps35239;rank=5 chr7 . exon 1774126 1776297 . + . ID=Thaps35342.4;Parent=Thaps35342;constitutive=1;rank=4 chr7 . exon 1776325 1776603 . + . ID=Thaps35342.5;Parent=Thaps35342;constitutive=1;rank=5 chr7 . exon 1776684 1777078 . + . ID=Thaps35342.6;Parent=Thaps35342;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . exon 1777294 1777516 . + . ID=Thaps35342.7;Parent=Thaps35342;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . exon 1777614 1778111 . + . ID=Thaps35342.8;Parent=Thaps35342;constitutive=1;rank=8 chr7 ensembl protein_coding_gene 1780167 1780760 . + . ID=Thaps35748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNU7];external_name=Thaps35748;logic_name=jgi_thaps3 chr7 ensembl transcript 1780167 1780760 . + . ID=Thaps35748;Parent=Thaps35748;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1780167 1780760 . + 0 ID=Thaps35748;Parent=Thaps35748;rank=1 chr7 . exon 1780167 1780760 . + . ID=Thaps35748.1;Parent=Thaps35748;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1788045 1788890 . + . ID=Thaps23620;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNV0];external_name=Thaps23620;logic_name=jgi_thaps3 chr7 ensembl transcript 1788045 1788890 . + . ID=Thaps23620;Parent=Thaps23620;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1788045 1788890 . + 0 ID=Thaps23620;Parent=Thaps23620;rank=1 chr7 . exon 1788045 1788890 . + . ID=Thaps23620.1;Parent=Thaps23620;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1786492 1787275 . - . ID=Thaps263287;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNU9];external_name=CUE11;logic_name=jgi_thaps3 chr7 ensembl transcript 1786492 1787275 . - . ID=Thaps263287;Parent=Thaps263287;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1786492 1786632 . - 0 ID=Thaps263287;Parent=Thaps263287;rank=2 chr7 . exon 1786492 1786632 . - . ID=Thaps263287.2;Parent=Thaps263287;constitutive=1;rank=2 chr7 . CDS 1786736 1787275 . - 0 ID=Thaps263287;Parent=Thaps263287;rank=1 chr7 . exon 1786736 1787275 . - . ID=Thaps263287.1;Parent=Thaps263287;constitutive=1;rank=1 chr7 . exon 1784626 1785849 . + . ID=Thaps35239.5;Parent=Thaps35239;constitutive=1;rank=5 chr7 ensembl protein_coding_gene 1791803 1793036 . + . ID=Thaps35532;biotype=protein_coding;description=UDP-glucose 4-epimerase %3B uridine diphosphoglucose epimerase%3B uridine diphosphate galactose 4-epimerase [Source:UniProtKB/TrEMBL%3BAcc:B5YNV2];external_name=GALE1;logic_name=jgi_thaps3 chr7 ensembl transcript 1791803 1793036 . + . ID=Thaps35532;Parent=Thaps35532;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1791803 1792423 . + 0 ID=Thaps35532;Parent=Thaps35532;rank=1 chr7 . exon 1791803 1792423 . + . ID=Thaps35532.1;Parent=Thaps35532;constitutive=1;rank=1 chr7 . CDS 1792557 1793036 . + 0 ID=Thaps35532;Parent=Thaps35532;rank=2 chr7 . exon 1792557 1793036 . + . ID=Thaps35532.2;Parent=Thaps35532;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1790263 1791074 . - . ID=Thaps7280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNV1];external_name=Thaps7280;logic_name=jgi_thaps3 chr7 ensembl transcript 1790263 1791074 . - . ID=Thaps7280;Parent=Thaps7280;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1790263 1790477 . - 0 ID=Thaps7280;Parent=Thaps7280;rank=4 chr7 . exon 1790263 1790477 . - . ID=Thaps7280.4;Parent=Thaps7280;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1790581 1790647 . - 0 ID=Thaps7280;Parent=Thaps7280;rank=3 chr7 . exon 1790581 1790647 . - . ID=Thaps7280.3;Parent=Thaps7280;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1790757 1790771 . - 0 ID=Thaps7280;Parent=Thaps7280;rank=2 chr7 . exon 1790757 1790771 . - . ID=Thaps7280.2;Parent=Thaps7280;constitutive=1;rank=2 chr7 . CDS 1790946 1791074 . - 0 ID=Thaps7280;Parent=Thaps7280;rank=1 chr7 . exon 1790946 1791074 . - . ID=Thaps7280.1;Parent=Thaps7280;constitutive=1;rank=1 chr7 . repeat_region 1794176 1794198 . ? . description=trf chr7 . repeat_region 1794176 1794202 . ? . description=dust chr7 . repeat_region 1798758 1798781 . ? . description=trf chr7 . repeat_region 1799158 1799196 . ? . description=trf chr7 . repeat_region 1799355 1799375 . ? . description=trf chr7 . repeat_region 1799355 1799375 . ? . description=dust chr7 . repeat_region 1799602 1799628 . ? . description=trf chr7 . repeat_region 1799602 1799628 . ? . description=dust chr7 ensembl protein_coding_gene 1795444 1796397 . - . ID=Thaps16675;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNV4];external_name=Thaps16675;logic_name=jgi_thaps3 chr7 ensembl transcript 1795444 1796397 . - . ID=Thaps16675;Parent=Thaps16675;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1795444 1796397 . - 0 ID=Thaps16675;Parent=Thaps16675;rank=1 chr7 . exon 1795444 1796397 . - . ID=Thaps16675.1;Parent=Thaps16675;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1799202 1800310 . + . ID=Thaps23621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNV6];external_name=Thaps23621;logic_name=jgi_thaps3 chr7 ensembl transcript 1799202 1800310 . + . ID=Thaps23621;Parent=Thaps23621;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1799202 1799730 . + 0 ID=Thaps23621;Parent=Thaps23621;rank=1 chr7 . exon 1799202 1799730 . + . ID=Thaps23621.1;Parent=Thaps23621;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1799854 1799918 . + 0 ID=Thaps23621;Parent=Thaps23621;rank=2 chr7 . exon 1799854 1799918 . + . ID=Thaps23621.2;Parent=Thaps23621;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1800041 1800310 . + 0 ID=Thaps23621;Parent=Thaps23621;rank=3 chr7 . exon 1800041 1800310 . + . ID=Thaps23621.3;Parent=Thaps23621;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1802033 1803759 . + . ID=Thaps23622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNV7];external_name=Thaps23622;logic_name=jgi_thaps3 chr7 ensembl transcript 1802033 1803759 . + . ID=Thaps23622;Parent=Thaps23622;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1802033 1802947 . + 0 ID=Thaps23622;Parent=Thaps23622;rank=1 chr7 . exon 1802033 1802947 . + . ID=Thaps23622.1;Parent=Thaps23622;constitutive=1;rank=1 chr7 . CDS 1803079 1803759 . + 0 ID=Thaps23622;Parent=Thaps23622;rank=2 chr7 . exon 1803079 1803759 . + . ID=Thaps23622.2;Parent=Thaps23622;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1797528 1797974 . - . ID=Thaps35372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNV5];external_name=Thaps35372;logic_name=jgi_thaps3 chr7 ensembl transcript 1797528 1797974 . - . ID=Thaps35372;Parent=Thaps35372;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1797528 1797974 . - 0 ID=Thaps35372;Parent=Thaps35372;rank=1 chr7 . exon 1797528 1797974 . - . ID=Thaps35372.1;Parent=Thaps35372;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1793802 1794729 . + . ID=Thaps7282;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNV3];external_name=Thaps7282;logic_name=jgi_thaps3 chr7 ensembl transcript 1793802 1794729 . + . ID=Thaps7282;Parent=Thaps7282;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1793802 1794131 . + 0 ID=Thaps7282;Parent=Thaps7282;rank=1 chr7 . exon 1793802 1794131 . + . ID=Thaps7282.1;Parent=Thaps7282;constitutive=1;rank=1 chr7 . CDS 1794220 1794729 . + 0 ID=Thaps7282;Parent=Thaps7282;rank=2 chr7 . exon 1794220 1794729 . + . ID=Thaps7282.2;Parent=Thaps7282;constitutive=1;rank=2 chr7 . repeat_region 1812605 1813311 . + . description=TE2b_TP chr7 ensembl protein_coding_gene 1806562 1807494 . + . ID=Thaps23623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNV8];external_name=Thaps23623;logic_name=jgi_thaps3 chr7 ensembl transcript 1806562 1807494 . + . ID=Thaps23623;Parent=Thaps23623;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1806562 1807029 . + 0 ID=Thaps23623;Parent=Thaps23623;rank=1 chr7 . exon 1806562 1807029 . + . ID=Thaps23623.1;Parent=Thaps23623;constitutive=1;rank=1 chr7 . CDS 1807123 1807494 . + 0 ID=Thaps23623;Parent=Thaps23623;rank=2 chr7 . exon 1807123 1807494 . + . ID=Thaps23623.2;Parent=Thaps23623;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1809702 1811154 . + . ID=Thaps23624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNW0];external_name=Thaps23624;logic_name=jgi_thaps3 chr7 ensembl transcript 1809702 1811154 . + . ID=Thaps23624;Parent=Thaps23624;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1809702 1810329 . + 0 ID=Thaps23624;Parent=Thaps23624;rank=1 chr7 . exon 1809702 1810329 . + . ID=Thaps23624.1;Parent=Thaps23624;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1810419 1810954 . + 0 ID=Thaps23624;Parent=Thaps23624;rank=2 chr7 . exon 1810419 1810954 . + . ID=Thaps23624.2;Parent=Thaps23624;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1811056 1811154 . + 0 ID=Thaps23624;Parent=Thaps23624;rank=3 chr7 . exon 1811056 1811154 . + . ID=Thaps23624.3;Parent=Thaps23624;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1807786 1808316 . - . ID=Thaps35328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNV9];external_name=Thaps35328;logic_name=jgi_thaps3 chr7 ensembl transcript 1807786 1808316 . - . ID=Thaps35328;Parent=Thaps35328;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1807786 1808049 . - 0 ID=Thaps35328;Parent=Thaps35328;rank=2 chr7 . exon 1807786 1808049 . - . ID=Thaps35328.2;Parent=Thaps35328;constitutive=1;rank=2 chr7 . CDS 1808146 1808316 . - 0 ID=Thaps35328;Parent=Thaps35328;rank=1 chr7 . exon 1808146 1808316 . - . ID=Thaps35328.1;Parent=Thaps35328;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1811691 1812419 . - . ID=Thaps7290;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNW1];external_name=Thaps7290;logic_name=jgi_thaps3 chr7 ensembl transcript 1811691 1812419 . - . ID=Thaps7290;Parent=Thaps7290;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1811691 1812419 . - 0 ID=Thaps7290;Parent=Thaps7290;rank=1 chr7 . exon 1811691 1812419 . - . ID=Thaps7290.1;Parent=Thaps7290;constitutive=1;rank=1 chr7 . repeat_region 1813249 1813288 . ? . description=trf chr7 . repeat_region 1814745 1814777 . ? . description=trf chr7 . repeat_region 1814745 1814784 . ? . description=dust chr7 . repeat_region 1820177 1820210 . ? . description=dust chr7 ensembl protein_coding_gene 1821328 1822739 . - . ID=Thaps23626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNW5];external_name=Thaps23626;logic_name=jgi_thaps3 chr7 ensembl transcript 1821328 1822739 . - . ID=Thaps23626;Parent=Thaps23626;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1821328 1821393 . - 0 ID=Thaps23626;Parent=Thaps23626;rank=3 chr7 . exon 1821328 1821393 . - . ID=Thaps23626.3;Parent=Thaps23626;constitutive=1;rank=3 chr7 . CDS 1821481 1822423 . - 0 ID=Thaps23626;Parent=Thaps23626;rank=2 chr7 . exon 1821481 1822423 . - . ID=Thaps23626.2;Parent=Thaps23626;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1822594 1822739 . - 0 ID=Thaps23626;Parent=Thaps23626;rank=1 chr7 . exon 1822594 1822739 . - . ID=Thaps23626.1;Parent=Thaps23626;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1813787 1814975 . - . ID=Thaps35728;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNW2];external_name=Thaps35728;logic_name=jgi_thaps3 chr7 ensembl transcript 1813787 1814975 . - . ID=Thaps35728;Parent=Thaps35728;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1813787 1814725 . - 0 ID=Thaps35728;Parent=Thaps35728;rank=2 chr7 . exon 1813787 1814725 . - . ID=Thaps35728.2;Parent=Thaps35728;constitutive=1;rank=2 chr7 . CDS 1814907 1814975 . - 0 ID=Thaps35728;Parent=Thaps35728;rank=1 chr7 . exon 1814907 1814975 . - . ID=Thaps35728.1;Parent=Thaps35728;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1816498 1816851 . + . ID=Thaps7292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNW3];external_name=Thaps7292;logic_name=jgi_thaps3 chr7 ensembl transcript 1816498 1816851 . + . ID=Thaps7292;Parent=Thaps7292;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1816498 1816851 . + 0 ID=Thaps7292;Parent=Thaps7292;rank=1 chr7 . exon 1816498 1816851 . + . ID=Thaps7292.1;Parent=Thaps7292;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1818603 1820950 . - . ID=Thaps7293;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNW4];external_name=Thaps7293;logic_name=jgi_thaps3 chr7 ensembl transcript 1818603 1820950 . - . ID=Thaps7293;Parent=Thaps7293;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1818603 1818643 . - 0 ID=Thaps7293;Parent=Thaps7293;rank=6 chr7 . exon 1818603 1818643 . - . ID=Thaps7293.6;Parent=Thaps7293;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . CDS 1819079 1819131 . - 0 ID=Thaps7293;Parent=Thaps7293;rank=5 chr7 . exon 1819079 1819131 . - . ID=Thaps7293.5;Parent=Thaps7293;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 1819275 1819660 . - 0 ID=Thaps7293;Parent=Thaps7293;rank=4 chr7 . exon 1819275 1819660 . - . ID=Thaps7293.4;Parent=Thaps7293;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1819740 1819802 . - 0 ID=Thaps7293;Parent=Thaps7293;rank=3 chr7 . exon 1819740 1819802 . - . ID=Thaps7293.3;Parent=Thaps7293;constitutive=1;rank=3 chr7 . CDS 1819946 1820141 . - 0 ID=Thaps7293;Parent=Thaps7293;rank=2 chr7 . exon 1819946 1820141 . - . ID=Thaps7293.2;Parent=Thaps7293;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1820319 1820950 . - 0 ID=Thaps7293;Parent=Thaps7293;rank=1 chr7 . exon 1820319 1820950 . - . ID=Thaps7293.1;Parent=Thaps7293;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1823759 1824568 . + . ID=Thaps15605;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNW6];external_name=Thaps15605;logic_name=jgi_thaps3 chr7 ensembl transcript 1823759 1824568 . + . ID=Thaps15605;Parent=Thaps15605;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1823759 1824568 . + 0 ID=Thaps15605;Parent=Thaps15605;rank=1 chr7 . exon 1823759 1824568 . + . ID=Thaps15605.1;Parent=Thaps15605;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1824626 1825546 . + . ID=Thaps16501;biotype=protein_coding;description=Protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B5YNW7];external_name=Thaps16501;logic_name=jgi_thaps3 chr7 ensembl transcript 1824626 1825546 . + . ID=Thaps16501;Parent=Thaps16501;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1824626 1824964 . + 0 ID=Thaps16501;Parent=Thaps16501;rank=1 chr7 . exon 1824626 1824964 . + . ID=Thaps16501.1;Parent=Thaps16501;constitutive=1;rank=1 chr7 . CDS 1825040 1825546 . + 0 ID=Thaps16501;Parent=Thaps16501;rank=2 chr7 . exon 1825040 1825546 . + . ID=Thaps16501.2;Parent=Thaps16501;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1826699 1827235 . - . ID=Thaps35459;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNW8];external_name=Thaps35459;logic_name=jgi_thaps3 chr7 ensembl transcript 1826699 1827235 . - . ID=Thaps35459;Parent=Thaps35459;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1826699 1827235 . - 0 ID=Thaps35459;Parent=Thaps35459;rank=1 chr7 . exon 1826699 1827235 . - . ID=Thaps35459.1;Parent=Thaps35459;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1829358 1830847 . - . ID=Thaps35710;biotype=protein_coding;description=Acyl-coa dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B5YNW9];external_name=ACD1;logic_name=jgi_thaps3 chr7 ensembl transcript 1829358 1830847 . - . ID=Thaps35710;Parent=Thaps35710;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1829358 1829603 . - 0 ID=Thaps35710;Parent=Thaps35710;rank=4 chr7 . exon 1829358 1829603 . - . ID=Thaps35710.4;Parent=Thaps35710;constitutive=1;rank=4 chr7 . CDS 1829738 1830119 . - 0 ID=Thaps35710;Parent=Thaps35710;rank=3 chr7 . exon 1829738 1830119 . - . ID=Thaps35710.3;Parent=Thaps35710;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1830207 1830622 . - 0 ID=Thaps35710;Parent=Thaps35710;rank=2 chr7 . exon 1830207 1830622 . - . ID=Thaps35710.2;Parent=Thaps35710;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1830755 1830847 . - 0 ID=Thaps35710;Parent=Thaps35710;rank=1 chr7 . exon 1830755 1830847 . - . ID=Thaps35710.1;Parent=Thaps35710;constitutive=1;rank=1 chr7 . repeat_region 1838505 1838862 . ? . description=trf chr7 . repeat_region 1838757 1839011 . ? . description=trf chr7 . repeat_region 1840708 1840859 . ? . description=trf chr7 . repeat_region 1842374 1843101 . + . description=Copia6I_TP chr7 ensembl protein_coding_gene 1834321 1834869 . + . ID=Thaps35340;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX0];external_name=Thaps35340;logic_name=jgi_thaps3 chr7 ensembl transcript 1834321 1834869 . + . ID=Thaps35340;Parent=Thaps35340;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1834321 1834869 . + 0 ID=Thaps35340;Parent=Thaps35340;rank=1 chr7 . exon 1834321 1834869 . + . ID=Thaps35340.1;Parent=Thaps35340;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1835478 1837674 . - . ID=Thaps7299;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX1];external_name=Thaps7299;logic_name=jgi_thaps3 chr7 ensembl transcript 1835478 1837674 . - . ID=Thaps7299;Parent=Thaps7299;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1835478 1835575 . - 0 ID=Thaps7299;Parent=Thaps7299;rank=2 chr7 . exon 1835478 1835575 . - . ID=Thaps7299.2;Parent=Thaps7299;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1835868 1837674 . - 0 ID=Thaps7299;Parent=Thaps7299;rank=1 chr7 . exon 1835868 1837674 . - . ID=Thaps7299.1;Parent=Thaps7299;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1839078 1840549 . + . ID=Thaps7300;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX2];external_name=Thaps7300;logic_name=jgi_thaps3 chr7 ensembl transcript 1839078 1840549 . + . ID=Thaps7300;Parent=Thaps7300;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1839078 1840376 . + 0 ID=Thaps7300;Parent=Thaps7300;rank=1 chr7 . exon 1839078 1840376 . + . ID=Thaps7300.1;Parent=Thaps7300;constitutive=1;rank=1 chr7 . CDS 1840412 1840549 . + 0 ID=Thaps7300;Parent=Thaps7300;rank=2 chr7 . exon 1840412 1840549 . + . ID=Thaps7300.2;Parent=Thaps7300;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1841240 1843679 . + . ID=Thaps7301;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX3];external_name=Thaps7301;logic_name=jgi_thaps3 chr7 ensembl transcript 1841240 1843679 . + . ID=Thaps7301;Parent=Thaps7301;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1841240 1842207 . + 0 ID=Thaps7301;Parent=Thaps7301;rank=1 chr7 . exon 1841240 1842207 . + . ID=Thaps7301.1;Parent=Thaps7301;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1843162 1843590 . + 0 ID=Thaps7301;Parent=Thaps7301;rank=2 chr7 . CDS 1843649 1843679 . + 0 ID=Thaps7301;Parent=Thaps7301;rank=3 chr7 . repeat_region 1844150 1844276 . + . description=PtCopiaLikeTe2 chr7 ensembl protein_coding_gene 1849762 1851046 . - . ID=Thaps263297;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX4];external_name=Thaps263297;logic_name=jgi_thaps3 chr7 ensembl transcript 1849762 1851046 . - . ID=Thaps263297;Parent=Thaps263297;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1849762 1850215 . - 0 ID=Thaps263297;Parent=Thaps263297;rank=4 chr7 . exon 1849762 1850215 . - . ID=Thaps263297.4;Parent=Thaps263297;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1850301 1850517 . - 0 ID=Thaps263297;Parent=Thaps263297;rank=3 chr7 . exon 1850301 1850517 . - . ID=Thaps263297.3;Parent=Thaps263297;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1850595 1850931 . - 0 ID=Thaps263297;Parent=Thaps263297;rank=2 chr7 . exon 1850595 1850931 . - . ID=Thaps263297.2;Parent=Thaps263297;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1851021 1851046 . - 0 ID=Thaps263297;Parent=Thaps263297;rank=1 chr7 . exon 1851021 1851046 . - . ID=Thaps263297.1;Parent=Thaps263297;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . exon 1843162 1843590 . + . ID=Thaps7301.2;Parent=Thaps7301;constitutive=1;rank=2 chr7 . exon 1843649 1843679 . + . ID=Thaps7301.3;Parent=Thaps7301;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . repeat_region 1854321 1854367 . ? . description=trf chr7 . repeat_region 1854494 1854555 . ? . description=dust chr7 . repeat_region 1854707 1854714 . ? . description=dust chr7 ensembl protein_coding_gene 1855610 1856923 . - . ID=Thaps23630;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX5];external_name=Thaps23630;logic_name=jgi_thaps3 chr7 ensembl transcript 1855610 1856923 . - . ID=Thaps23630;Parent=Thaps23630;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1855610 1856923 . - 0 ID=Thaps23630;Parent=Thaps23630;rank=1 chr7 . exon 1855610 1856923 . - . ID=Thaps23630.1;Parent=Thaps23630;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1859663 1861414 . - . ID=Thaps263298;biotype=protein_coding;description=Predicted proteinPutative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX7];external_name=Thaps263298;logic_name=jgi_thaps3 chr7 ensembl transcript 1859663 1861414 . - . ID=Thaps263298;Parent=Thaps263298;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1859663 1861414 . - 0 ID=Thaps263298;Parent=Thaps263298;rank=1 chr7 . exon 1859663 1861414 . - . ID=Thaps263298.1;Parent=Thaps263298;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1862428 1863000 . - . ID=Thaps263299;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX8];external_name=Thaps263299;logic_name=jgi_thaps3 chr7 ensembl transcript 1862428 1863000 . - . ID=Thaps263299;Parent=Thaps263299;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1862428 1863000 . - 0 ID=Thaps263299;Parent=Thaps263299;rank=1 chr7 . exon 1862428 1863000 . - . ID=Thaps263299.1;Parent=Thaps263299;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1857769 1859280 . + . ID=Thaps7304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX6];external_name=Thaps7304;logic_name=jgi_thaps3 chr7 ensembl transcript 1857769 1859280 . + . ID=Thaps7304;Parent=Thaps7304;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1857769 1857969 . + 0 ID=Thaps7304;Parent=Thaps7304;rank=1 chr7 . exon 1857769 1857969 . + . ID=Thaps7304.1;Parent=Thaps7304;constitutive=1;rank=1 chr7 . CDS 1858141 1859280 . + 0 ID=Thaps7304;Parent=Thaps7304;rank=2 chr7 . exon 1858141 1859280 . + . ID=Thaps7304.2;Parent=Thaps7304;constitutive=1;rank=2 chr7 ensembl protein_coding_gene 1865642 1867393 . + . ID=Thaps263301;biotype=protein_coding;description=Predicted proteinPutative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX7];external_name=Thaps263301;logic_name=jgi_thaps3 chr7 ensembl transcript 1865642 1867393 . + . ID=Thaps263301;Parent=Thaps263301;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1865642 1867393 . + 0 ID=Thaps263301;Parent=Thaps263301;rank=1 chr7 . exon 1865642 1867393 . + . ID=Thaps263301.1;Parent=Thaps263301;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1863921 1864628 . + . ID=Thaps269307;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNX9];external_name=Thaps269307;logic_name=jgi_thaps3 chr7 ensembl transcript 1863921 1864628 . + . ID=Thaps269307;Parent=Thaps269307;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1863921 1864628 . + 0 ID=Thaps269307;Parent=Thaps269307;rank=1 chr7 . exon 1863921 1864628 . + . ID=Thaps269307.1;Parent=Thaps269307;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1869365 1871411 . - . ID=Thaps29049;biotype=protein_coding;description=Translation initiation factor IF-2 [Source:UniProtKB/TrEMBL%3BAcc:B5YNY2];external_name=Thaps29049;logic_name=jgi_thaps3 chr7 ensembl transcript 1869365 1871411 . - . ID=Thaps29049;Parent=Thaps29049;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1869365 1869469 . - 0 ID=Thaps29049;Parent=Thaps29049;rank=4 chr7 . exon 1869365 1869469 . - . ID=Thaps29049.4;Parent=Thaps29049;constitutive=1;rank=4 chr7 . CDS 1869559 1870150 . - 0 ID=Thaps29049;Parent=Thaps29049;rank=3 chr7 . exon 1869559 1870150 . - . ID=Thaps29049.3;Parent=Thaps29049;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1870237 1871115 . - 0 ID=Thaps29049;Parent=Thaps29049;rank=2 chr7 . exon 1870237 1871115 . - . ID=Thaps29049.2;Parent=Thaps29049;constitutive=1;rank=2 chr7 . CDS 1871215 1871411 . - 0 ID=Thaps29049;Parent=Thaps29049;rank=1 chr7 . exon 1871215 1871411 . - . ID=Thaps29049.1;Parent=Thaps29049;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1867766 1869043 . - . ID=Thaps7307;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNY1];external_name=Thaps7307;logic_name=jgi_thaps3 chr7 ensembl transcript 1867766 1869043 . - . ID=Thaps7307;Parent=Thaps7307;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1867766 1869043 . - 0 ID=Thaps7307;Parent=Thaps7307;rank=1 chr7 . exon 1867766 1869043 . - . ID=Thaps7307.1;Parent=Thaps7307;constitutive=1;rank=1 chr7 . repeat_region 1873189 1873263 . ? . description=trf chr7 . repeat_region 1880935 1880960 . ? . description=trf chr7 . repeat_region 1882958 1882978 . ? . description=trf chr7 . repeat_region 1882958 1882978 . ? . description=dust chr7 ensembl protein_coding_gene 1879878 1880511 . - . ID=Thaps18148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNY6];external_name=Thaps18148;logic_name=jgi_thaps3 chr7 ensembl transcript 1879878 1880511 . - . ID=Thaps18148;Parent=Thaps18148;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1879878 1880080 . - 0 ID=Thaps18148;Parent=Thaps18148;rank=2 chr7 . exon 1879878 1880080 . - . ID=Thaps18148.2;Parent=Thaps18148;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1880190 1880511 . - 0 ID=Thaps18148;Parent=Thaps18148;rank=1 chr7 . exon 1880190 1880511 . - . ID=Thaps18148.1;Parent=Thaps18148;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1877598 1878879 . - . ID=Thaps29053;biotype=protein_coding;description=V-type H-ATPase subunit C [Source:UniProtKB/TrEMBL%3BAcc:B5YNY5];external_name=Thaps29053;logic_name=jgi_thaps3 chr7 ensembl transcript 1877598 1878879 . - . ID=Thaps29053;Parent=Thaps29053;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1877598 1877992 . - 0 ID=Thaps29053;Parent=Thaps29053;rank=3 chr7 . exon 1877598 1877992 . - . ID=Thaps29053.3;Parent=Thaps29053;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1878062 1878139 . - 0 ID=Thaps29053;Parent=Thaps29053;rank=2 chr7 . exon 1878062 1878139 . - . ID=Thaps29053.2;Parent=Thaps29053;constitutive=1;rank=2 chr7 . CDS 1878363 1878879 . - 0 ID=Thaps29053;Parent=Thaps29053;rank=1 chr7 . exon 1878363 1878879 . - . ID=Thaps29053.1;Parent=Thaps29053;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1874742 1875989 . + . ID=Thaps7310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNY3];external_name=Thaps7310;logic_name=jgi_thaps3 chr7 ensembl transcript 1874742 1875989 . + . ID=Thaps7310;Parent=Thaps7310;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1874742 1875989 . + 0 ID=Thaps7310;Parent=Thaps7310;rank=1 chr7 . exon 1874742 1875989 . + . ID=Thaps7310.1;Parent=Thaps7310;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1876544 1876864 . - . ID=Thaps7311;biotype=protein_coding;description=U6 snRNA-associated protein LSm8-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNY4];external_name=Thaps7311;logic_name=jgi_thaps3 chr7 ensembl transcript 1876544 1876864 . - . ID=Thaps7311;Parent=Thaps7311;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1876544 1876864 . - 0 ID=Thaps7311;Parent=Thaps7311;rank=1 chr7 . exon 1876544 1876864 . - . ID=Thaps7311.1;Parent=Thaps7311;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1881342 1881662 . + . ID=Thaps7313;biotype=protein_coding;description=U6 snRNA-associated Sm-like protein LSm8-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNY7];external_name=Thaps7313;logic_name=jgi_thaps3 chr7 ensembl transcript 1881342 1881662 . + . ID=Thaps7313;Parent=Thaps7313;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1881342 1881662 . + 0 ID=Thaps7313;Parent=Thaps7313;rank=1 chr7 . exon 1881342 1881662 . + . ID=Thaps7313.1;Parent=Thaps7313;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1883538 1885894 . + . ID=Thaps263310;biotype=protein_coding;description=Cytosolic alpha-mannosidase [Source:UniProtKB/TrEMBL%3BAcc:B5YNY8];external_name=Thaps263310;logic_name=jgi_thaps3 chr7 ensembl transcript 1883538 1885894 . + . ID=Thaps263310;Parent=Thaps263310;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1883538 1883726 . + 0 ID=Thaps263310;Parent=Thaps263310;rank=1 chr7 . exon 1883538 1883726 . + . ID=Thaps263310.1;Parent=Thaps263310;constitutive=1;rank=1 chr7 . CDS 1883808 1884901 . + 0 ID=Thaps263310;Parent=Thaps263310;rank=2 chr7 . exon 1883808 1884901 . + . ID=Thaps263310.2;Parent=Thaps263310;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1884953 1885894 . + 0 ID=Thaps263310;Parent=Thaps263310;rank=3 chr7 . exon 1884953 1885894 . + . ID=Thaps263310.3;Parent=Thaps263310;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1889032 1890390 . - . ID=Thaps35274;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNY9];external_name=Thaps35274;logic_name=jgi_thaps3 chr7 ensembl transcript 1889032 1890390 . - . ID=Thaps35274;Parent=Thaps35274;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1889032 1889357 . - 0 ID=Thaps35274;Parent=Thaps35274;rank=3 chr7 . exon 1889032 1889357 . - . ID=Thaps35274.3;Parent=Thaps35274;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1890077 1890199 . - 0 ID=Thaps35274;Parent=Thaps35274;rank=2 chr7 . exon 1890077 1890199 . - . ID=Thaps35274.2;Parent=Thaps35274;constitutive=1;rank=2 chr7 . CDS 1890321 1890390 . - 0 ID=Thaps35274;Parent=Thaps35274;rank=1 chr7 . exon 1890321 1890390 . - . ID=Thaps35274.1;Parent=Thaps35274;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . biological_region 1898199 1898200 0.999 + . logic_name=eponine chr7 ensembl protein_coding_gene 1899319 1901087 . + . ID=Thaps263313;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ1];external_name=Thaps263313;logic_name=jgi_thaps3 chr7 ensembl transcript 1899319 1901087 . + . ID=Thaps263313;Parent=Thaps263313;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1899319 1899761 . + 0 ID=Thaps263313;Parent=Thaps263313;rank=1 chr7 . exon 1899319 1899761 . + . ID=Thaps263313.1;Parent=Thaps263313;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1899831 1900182 . + 0 ID=Thaps263313;Parent=Thaps263313;rank=2 chr7 . exon 1899831 1900182 . + . ID=Thaps263313.2;Parent=Thaps263313;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1900432 1901087 . + 0 ID=Thaps263313;Parent=Thaps263313;rank=3 chr7 . exon 1900432 1901087 . + . ID=Thaps263313.3;Parent=Thaps263313;constitutive=1;ensembl_end_phase=2;rank=3 chr7 ensembl protein_coding_gene 1893087 1897958 . + . ID=Thaps29057;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ0];external_name=Thaps29057;logic_name=jgi_thaps3 chr7 ensembl transcript 1893087 1897958 . + . ID=Thaps29057;Parent=Thaps29057;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1893087 1893116 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=1 chr7 . exon 1893087 1893116 . + . ID=Thaps29057.1;Parent=Thaps29057;constitutive=1;rank=1 chr7 . CDS 1893342 1893932 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=2 chr7 . exon 1893342 1893932 . + . ID=Thaps29057.2;Parent=Thaps29057;constitutive=1;rank=2 chr7 . CDS 1893996 1894193 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=3 chr7 . exon 1893996 1894193 . + . ID=Thaps29057.3;Parent=Thaps29057;constitutive=1;rank=3 chr7 . CDS 1894245 1894572 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=4 chr7 . exon 1894245 1894572 . + . ID=Thaps29057.4;Parent=Thaps29057;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1894663 1895045 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=5 chr7 . exon 1894663 1895045 . + . ID=Thaps29057.5;Parent=Thaps29057;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 1895094 1895258 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=6 chr7 . exon 1895094 1895258 . + . ID=Thaps29057.6;Parent=Thaps29057;constitutive=1;rank=6 chr7 . CDS 1895337 1895639 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=7 chr7 . exon 1895337 1895639 . + . ID=Thaps29057.7;Parent=Thaps29057;constitutive=1;rank=7 chr7 . CDS 1895775 1896087 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=8 chr7 . exon 1895775 1896087 . + . ID=Thaps29057.8;Parent=Thaps29057;constitutive=1;ensembl_end_phase=1;rank=8 chr7 . CDS 1896170 1896388 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=9 chr7 . exon 1896170 1896388 . + . ID=Thaps29057.9;Parent=Thaps29057;constitutive=1;rank=9 chr7 . CDS 1896812 1897044 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=10 chr7 . exon 1896812 1897044 . + . ID=Thaps29057.10;Parent=Thaps29057;constitutive=1;ensembl_end_phase=2;rank=10 chr7 . CDS 1897137 1897958 . + 0 ID=Thaps29057;Parent=Thaps29057;rank=11 chr7 . exon 1897137 1897958 . + . ID=Thaps29057.11;Parent=Thaps29057;constitutive=1;rank=11 chr7 . repeat_region 1903535 1903554 . ? . description=trf chr7 . repeat_region 1905101 1905151 . ? . description=trf chr7 . repeat_region 1905101 1905151 . ? . description=trf chr7 . repeat_region 1905243 1905287 . ? . description=trf chr7 . repeat_region 1908978 1909946 . ? . description=trf chr7 . repeat_region 1909947 1910041 . - . description=MuDR1_TP chr7 ensembl rRNA_gene 1908992 1909105 . - . ID=EPrTPOG00000000055;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr7 ensembl rRNA 1908992 1909105 . - . ID=EPrTPOT00000000055;Parent=EPrTPOG00000000055;biotype=rRNA;logic_name=ncrna_eg chr7 ensembl rRNA_gene 1909288 1909401 . - . ID=EPrTPOG00000000079;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr7 ensembl rRNA 1909288 1909401 . - . ID=EPrTPOT00000000079;Parent=EPrTPOG00000000079;biotype=rRNA;logic_name=ncrna_eg chr7 ensembl rRNA_gene 1909587 1909700 . - . ID=EPrTPOG00000000084;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr7 ensembl rRNA 1909587 1909700 . - . ID=EPrTPOT00000000084;Parent=EPrTPOG00000000084;biotype=rRNA;logic_name=ncrna_eg chr7 . exon 1908992 1909105 . - . ID=EPrTPOE00000000055;Parent=EPrTPOT00000000055;constitutive=1;rank=1 chr7 . exon 1909288 1909401 . - . ID=EPrTPOE00000000079;Parent=EPrTPOT00000000079;constitutive=1;rank=1 chr7 . exon 1909587 1909700 . - . ID=EPrTPOE00000000084;Parent=EPrTPOT00000000084;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1903614 1905061 . + . ID=Thaps13982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ2];external_name=Thaps13982;logic_name=jgi_thaps3 chr7 ensembl transcript 1903614 1905061 . + . ID=Thaps13982;Parent=Thaps13982;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1903614 1904796 . + 0 ID=Thaps13982;Parent=Thaps13982;rank=1 chr7 . exon 1903614 1904796 . + . ID=Thaps13982.1;Parent=Thaps13982;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . CDS 1904901 1905061 . + 0 ID=Thaps13982;Parent=Thaps13982;rank=2 chr7 . exon 1904901 1905061 . + . ID=Thaps13982.2;Parent=Thaps13982;constitutive=1;ensembl_end_phase=2;rank=2 chr7 ensembl protein_coding_gene 1906590 1907523 . - . ID=Thaps263315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ3];external_name=Thaps263315;logic_name=jgi_thaps3 chr7 ensembl transcript 1906590 1907523 . - . ID=Thaps263315;Parent=Thaps263315;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1906590 1906698 . - 0 ID=Thaps263315;Parent=Thaps263315;rank=4 chr7 . exon 1906590 1906698 . - . ID=Thaps263315.4;Parent=Thaps263315;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1906738 1907037 . - 0 ID=Thaps263315;Parent=Thaps263315;rank=3 chr7 . exon 1906738 1907037 . - . ID=Thaps263315.3;Parent=Thaps263315;constitutive=1;rank=3 chr7 . CDS 1907092 1907239 . - 0 ID=Thaps263315;Parent=Thaps263315;rank=2 chr7 . exon 1907092 1907239 . - . ID=Thaps263315.2;Parent=Thaps263315;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1907267 1907523 . - 0 ID=Thaps263315;Parent=Thaps263315;rank=1 chr7 . exon 1907267 1907523 . - . ID=Thaps263315.1;Parent=Thaps263315;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1910104 1910637 . - . ID=Thaps7320;biotype=protein_coding;description=Copia protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ4];external_name=Thaps7320;logic_name=jgi_thaps3 chr7 ensembl transcript 1910104 1910637 . - . ID=Thaps7320;Parent=Thaps7320;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1910104 1910637 . - 0 ID=Thaps7320;Parent=Thaps7320;rank=1 chr7 . exon 1910104 1910637 . - . ID=Thaps7320.1;Parent=Thaps7320;constitutive=1;rank=1 chr7 . repeat_region 1914586 1914593 . ? . description=dust chr7 . repeat_region 1918525 1918539 . ? . description=dust chr7 . repeat_region 1918636 1918644 . ? . description=dust chr7 . repeat_region 1919186 1919206 . ? . description=dust chr7 . repeat_region 1919673 1919696 . ? . description=dust chr7 . repeat_region 1920698 1920705 . ? . description=dust chr7 ensembl rRNA_gene 1916477 1916590 . - . ID=EPrTPOG00000000064;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr7 ensembl rRNA 1916477 1916590 . - . ID=EPrTPOT00000000064;Parent=EPrTPOG00000000064;biotype=rRNA;logic_name=ncrna_eg chr7 . exon 1916477 1916590 . - . ID=EPrTPOE00000000064;Parent=EPrTPOT00000000064;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1920857 1925002 . + . ID=Thaps269314;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ6];external_name=Thaps269314;logic_name=jgi_thaps3 chr7 ensembl transcript 1920857 1925002 . + . ID=Thaps269314;Parent=Thaps269314;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1920857 1921072 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=1 chr7 . exon 1920857 1921072 . + . ID=Thaps269314.1;Parent=Thaps269314;constitutive=1;rank=1 chr7 . CDS 1921121 1921133 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=2 chr7 . exon 1921121 1921133 . + . ID=Thaps269314.2;Parent=Thaps269314;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1921344 1921419 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=3 chr7 . exon 1921344 1921419 . + . ID=Thaps269314.3;Parent=Thaps269314;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1921464 1921474 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=4 chr7 . exon 1921464 1921474 . + . ID=Thaps269314.4;Parent=Thaps269314;constitutive=1;ensembl_end_phase=2;rank=4 chr7 . CDS 1921530 1921597 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=5 chr7 . exon 1921530 1921597 . + . ID=Thaps269314.5;Parent=Thaps269314;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . CDS 1922378 1922884 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=6 chr7 . exon 1922378 1922884 . + . ID=Thaps269314.6;Parent=Thaps269314;constitutive=1;rank=6 chr7 . CDS 1922933 1923006 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=7 chr7 . CDS 1923286 1923440 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=8 chr7 . CDS 1923561 1923656 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=9 chr7 . CDS 1923732 1923902 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=10 chr7 . CDS 1924092 1924326 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=11 chr7 . CDS 1924408 1924546 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=12 chr7 . CDS 1924631 1924819 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=13 chr7 . CDS 1924919 1925002 . + 0 ID=Thaps269314;Parent=Thaps269314;rank=14 chr7 ensembl protein_coding_gene 1916830 1918735 . - . ID=Thaps7322;biotype=protein_coding;description=Translation initiation factor eIF-2%2C gamma subunit [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ5];external_name=Thaps7322;logic_name=jgi_thaps3 chr7 ensembl transcript 1916830 1918735 . - . ID=Thaps7322;Parent=Thaps7322;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1916830 1918197 . - 0 ID=Thaps7322;Parent=Thaps7322;rank=2 chr7 . exon 1916830 1918197 . - . ID=Thaps7322.2;Parent=Thaps7322;constitutive=1;rank=2 chr7 . CDS 1918652 1918735 . - 0 ID=Thaps7322;Parent=Thaps7322;rank=1 chr7 . exon 1918652 1918735 . - . ID=Thaps7322.1;Parent=Thaps7322;constitutive=1;rank=1 chr7 ensembl rRNA_gene 1929911 1930024 . + . ID=EPrTPOG00000000100;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr7 ensembl rRNA 1929911 1930024 . + . ID=EPrTPOT00000000100;Parent=EPrTPOG00000000100;biotype=rRNA;logic_name=ncrna_eg chr7 . exon 1929911 1930024 . + . ID=EPrTPOE00000000100;Parent=EPrTPOT00000000100;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1931032 1931736 . + . ID=Thaps23641;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ9];external_name=Thaps23641;logic_name=jgi_thaps3 chr7 ensembl transcript 1931032 1931736 . + . ID=Thaps23641;Parent=Thaps23641;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1931032 1931736 . + 0 ID=Thaps23641;Parent=Thaps23641;rank=1 chr7 . exon 1931032 1931736 . + . ID=Thaps23641.1;Parent=Thaps23641;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1932266 1935943 . - . ID=Thaps23642;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP00];external_name=Thaps23642;logic_name=jgi_thaps3 chr7 ensembl transcript 1932266 1935943 . - . ID=Thaps23642;Parent=Thaps23642;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1932266 1932765 . - 0 ID=Thaps23642;Parent=Thaps23642;rank=2 chr7 . exon 1932266 1932765 . - . ID=Thaps23642.2;Parent=Thaps23642;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1932853 1935943 . - 0 ID=Thaps23642;Parent=Thaps23642;rank=1 chr7 ensembl protein_coding_gene 1925278 1926833 . - . ID=Thaps263321;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ7];external_name=Thaps263321;logic_name=jgi_thaps3 chr7 ensembl transcript 1925278 1926833 . - . ID=Thaps263321;Parent=Thaps263321;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1925278 1925890 . - 0 ID=Thaps263321;Parent=Thaps263321;rank=3 chr7 . exon 1925278 1925890 . - . ID=Thaps263321.3;Parent=Thaps263321;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1926141 1926322 . - 0 ID=Thaps263321;Parent=Thaps263321;rank=2 chr7 . exon 1926141 1926322 . - . ID=Thaps263321.2;Parent=Thaps263321;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1926446 1926833 . - 0 ID=Thaps263321;Parent=Thaps263321;rank=1 chr7 . exon 1926446 1926833 . - . ID=Thaps263321.1;Parent=Thaps263321;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . exon 1922933 1923006 . + . ID=Thaps269314.7;Parent=Thaps269314;constitutive=1;ensembl_end_phase=2;rank=7 chr7 . exon 1923286 1923440 . + . ID=Thaps269314.8;Parent=Thaps269314;constitutive=1;ensembl_end_phase=2;rank=8 chr7 . exon 1923561 1923656 . + . ID=Thaps269314.9;Parent=Thaps269314;constitutive=1;rank=9 chr7 . exon 1923732 1923902 . + . ID=Thaps269314.10;Parent=Thaps269314;constitutive=1;rank=10 chr7 . exon 1924092 1924326 . + . ID=Thaps269314.11;Parent=Thaps269314;constitutive=1;ensembl_end_phase=1;rank=11 chr7 . exon 1924408 1924546 . + . ID=Thaps269314.12;Parent=Thaps269314;constitutive=1;ensembl_end_phase=1;rank=12 chr7 . exon 1924631 1924819 . + . ID=Thaps269314.13;Parent=Thaps269314;constitutive=1;rank=13 chr7 . exon 1924919 1925002 . + . ID=Thaps269314.14;Parent=Thaps269314;constitutive=1;rank=14 chr7 ensembl protein_coding_gene 1927886 1929745 . - . ID=Thaps7325;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YNZ8];external_name=Thaps7325;logic_name=jgi_thaps3 chr7 ensembl transcript 1927886 1929745 . - . ID=Thaps7325;Parent=Thaps7325;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1927886 1929249 . - 0 ID=Thaps7325;Parent=Thaps7325;rank=2 chr7 . exon 1927886 1929249 . - . ID=Thaps7325.2;Parent=Thaps7325;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1929349 1929745 . - 0 ID=Thaps7325;Parent=Thaps7325;rank=1 chr7 . exon 1929349 1929745 . - . ID=Thaps7325.1;Parent=Thaps7325;constitutive=1;ensembl_end_phase=1;rank=1 chr7 . repeat_region 1934347 1934366 . ? . description=trf chr7 . repeat_region 1934347 1934366 . ? . description=dust chr7 . repeat_region 1941805 1941847 . ? . description=dust chr7 . exon 1932853 1935943 . - . ID=Thaps23642.1;Parent=Thaps23642;constitutive=1;ensembl_end_phase=1;rank=1 chr7 ensembl protein_coding_gene 1939229 1940999 . + . ID=Thaps41463;biotype=protein_coding;description=Protein a serine carboxypeptidase domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP01];external_name=Thaps41463;logic_name=jgi_thaps3 chr7 ensembl transcript 1939229 1940999 . + . ID=Thaps41463;Parent=Thaps41463;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1939229 1939296 . + 0 ID=Thaps41463;Parent=Thaps41463;rank=1 chr7 . exon 1939229 1939296 . + . ID=Thaps41463.1;Parent=Thaps41463;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . CDS 1939392 1939686 . + 0 ID=Thaps41463;Parent=Thaps41463;rank=2 chr7 . exon 1939392 1939686 . + . ID=Thaps41463.2;Parent=Thaps41463;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1939707 1939809 . + 0 ID=Thaps41463;Parent=Thaps41463;rank=3 chr7 . exon 1939707 1939809 . + . ID=Thaps41463.3;Parent=Thaps41463;constitutive=1;ensembl_end_phase=1;rank=3 chr7 . CDS 1939861 1940262 . + 0 ID=Thaps41463;Parent=Thaps41463;rank=4 chr7 . exon 1939861 1940262 . + . ID=Thaps41463.4;Parent=Thaps41463;constitutive=1;rank=4 chr7 . CDS 1940368 1940999 . + 0 ID=Thaps41463;Parent=Thaps41463;rank=5 chr7 . exon 1940368 1940999 . + . ID=Thaps41463.5;Parent=Thaps41463;constitutive=1;ensembl_end_phase=2;rank=5 chr7 ensembl rRNA_gene 1948654 1948767 . - . ID=EPrTPOG00000000056;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr7 ensembl rRNA 1948654 1948767 . - . ID=EPrTPOT00000000056;Parent=EPrTPOG00000000056;biotype=rRNA;logic_name=ncrna_eg chr7 ensembl rRNA_gene 1948956 1949069 . - . ID=EPrTPOG00000000116;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr7 ensembl rRNA 1948956 1949069 . - . ID=EPrTPOT00000000116;Parent=EPrTPOG00000000116;biotype=rRNA;logic_name=ncrna_eg chr7 . exon 1948654 1948767 . - . ID=EPrTPOE00000000056;Parent=EPrTPOT00000000056;constitutive=1;rank=1 chr7 . exon 1948956 1949069 . - . ID=EPrTPOE00000000116;Parent=EPrTPOT00000000116;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1949356 1951974 . - . ID=Thaps269316;biotype=protein_coding;description=Acyl-CoA dehydrogenase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP04];external_name=Thaps269316;logic_name=jgi_thaps3 chr7 ensembl transcript 1949356 1951974 . - . ID=Thaps269316;Parent=Thaps269316;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1949356 1950596 . - 0 ID=Thaps269316;Parent=Thaps269316;rank=3 chr7 . exon 1949356 1950596 . - . ID=Thaps269316.3;Parent=Thaps269316;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1950699 1950997 . - 0 ID=Thaps269316;Parent=Thaps269316;rank=2 chr7 . exon 1950699 1950997 . - . ID=Thaps269316.2;Parent=Thaps269316;constitutive=1;ensembl_end_phase=2;rank=2 chr7 . CDS 1951094 1951974 . - 0 ID=Thaps269316;Parent=Thaps269316;rank=1 chr7 . exon 1951094 1951974 . - . ID=Thaps269316.1;Parent=Thaps269316;constitutive=1;ensembl_end_phase=2;rank=1 chr7 ensembl protein_coding_gene 1943541 1945544 . + . ID=Thaps7329;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP02];external_name=Thaps7329;logic_name=jgi_thaps3 chr7 ensembl transcript 1943541 1945544 . + . ID=Thaps7329;Parent=Thaps7329;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1943541 1944077 . + 0 ID=Thaps7329;Parent=Thaps7329;rank=1 chr7 . exon 1943541 1944077 . + . ID=Thaps7329.1;Parent=Thaps7329;constitutive=1;rank=1 chr7 . CDS 1944209 1944773 . + 0 ID=Thaps7329;Parent=Thaps7329;rank=2 chr7 . exon 1944209 1944773 . + . ID=Thaps7329.2;Parent=Thaps7329;constitutive=1;ensembl_end_phase=1;rank=2 chr7 . CDS 1944954 1945012 . + 0 ID=Thaps7329;Parent=Thaps7329;rank=3 chr7 . exon 1944954 1945012 . + . ID=Thaps7329.3;Parent=Thaps7329;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . CDS 1945070 1945118 . + 0 ID=Thaps7329;Parent=Thaps7329;rank=4 chr7 . exon 1945070 1945118 . + . ID=Thaps7329.4;Parent=Thaps7329;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . CDS 1945195 1945544 . + 0 ID=Thaps7329;Parent=Thaps7329;rank=5 chr7 . exon 1945195 1945544 . + . ID=Thaps7329.5;Parent=Thaps7329;constitutive=1;ensembl_end_phase=2;rank=5 chr7 ensembl protein_coding_gene 1946063 1947301 . - . ID=Thaps7330;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP03];external_name=Thaps7330;logic_name=jgi_thaps3 chr7 ensembl transcript 1946063 1947301 . - . ID=Thaps7330;Parent=Thaps7330;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1946063 1947301 . - 0 ID=Thaps7330;Parent=Thaps7330;rank=1 chr7 . exon 1946063 1947301 . - . ID=Thaps7330.1;Parent=Thaps7330;constitutive=1;rank=1 chr7 . repeat_region 1961330 1962390 . - . description=TE1_TP chr7 . repeat_region 1962387 1962559 . + . description=TE2c_TP chr7 . repeat_region 1962422 1962532 . ? . description=trf chr7 . repeat_region 1962438 1962589 . - . description=TE2c_TP chr7 ensembl rRNA_gene 1952924 1953037 . + . ID=EPrTPOG00000000016;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr7 ensembl rRNA 1952924 1953037 . + . ID=EPrTPOT00000000029;Parent=EPrTPOG00000000016;biotype=rRNA;logic_name=ncrna_eg chr7 . exon 1952924 1953037 . + . ID=EPrTPOE00000000016;Parent=EPrTPOT00000000029;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1954077 1956362 . + . ID=Thaps7332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP05];external_name=Thaps7332;logic_name=jgi_thaps3 chr7 ensembl transcript 1954077 1956362 . + . ID=Thaps7332;Parent=Thaps7332;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1954077 1956362 . + 0 ID=Thaps7332;Parent=Thaps7332;rank=1 chr7 . exon 1954077 1956362 . + . ID=Thaps7332.1;Parent=Thaps7332;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1957921 1960788 . - . ID=Thaps7333;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP06];external_name=Thaps7333;logic_name=jgi_thaps3 chr7 ensembl transcript 1957921 1960788 . - . ID=Thaps7333;Parent=Thaps7333;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1957921 1960788 . - 0 ID=Thaps7333;Parent=Thaps7333;rank=1 chr7 . exon 1957921 1960788 . - . ID=Thaps7333.1;Parent=Thaps7333;constitutive=1;rank=1 chr7 . repeat_region 1963298 1963506 . + . description=Gypsy3LTR_TP chr7 . repeat_region 1963495 1964845 . + . description=Gypsy3I_TP chr7 . repeat_region 1964843 1966360 . + . description=Gypsy3I_TP chr7 . repeat_region 1966361 1966978 . + . description=Gypsy3LTR_TP chr7 ensembl gene 1964058 1964638 . + . ID=Thaps263324;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr7 ensembl transcript 1964058 1964638 . + . ID=Thaps263324;Parent=Thaps263324;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr7 . exon 1964058 1964254 . + . ID=Thaps263324.1;Parent=Thaps263324;constitutive=1;ensembl_end_phase=2;rank=1 chr7 . exon 1964279 1964515 . + . ID=Thaps263324.2;Parent=Thaps263324;constitutive=1;rank=2 chr7 . exon 1964555 1964638 . + . ID=Thaps263324.3;Parent=Thaps263324;constitutive=1;rank=3 chr7 ensembl protein_coding_gene 1968990 1969493 . - . ID=Thaps7334;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP07];external_name=Thaps7334;logic_name=jgi_thaps3 chr7 ensembl transcript 1968990 1969493 . - . ID=Thaps7334;Parent=Thaps7334;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1968990 1969493 . - 0 ID=Thaps7334;Parent=Thaps7334;rank=1 chr7 . exon 1968990 1969493 . - . ID=Thaps7334.1;Parent=Thaps7334;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1970100 1970603 . - . ID=Thaps7335;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP07];external_name=Thaps7335;logic_name=jgi_thaps3 chr7 ensembl transcript 1970100 1970603 . - . ID=Thaps7335;Parent=Thaps7335;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1970100 1970603 . - 0 ID=Thaps7335;Parent=Thaps7335;rank=1 chr7 . exon 1970100 1970603 . - . ID=Thaps7335.1;Parent=Thaps7335;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1971210 1971713 . - . ID=Thaps7336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP07];external_name=Thaps7336;logic_name=jgi_thaps3 chr7 ensembl transcript 1971210 1971713 . - . ID=Thaps7336;Parent=Thaps7336;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1971210 1971713 . - 0 ID=Thaps7336;Parent=Thaps7336;rank=1 chr7 . exon 1971210 1971713 . - . ID=Thaps7336.1;Parent=Thaps7336;constitutive=1;rank=1 chr7 ensembl protein_coding_gene 1972329 1972823 . - . ID=Thaps7337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP10];external_name=Thaps7337;logic_name=jgi_thaps3 chr7 ensembl transcript 1972329 1972823 . - . ID=Thaps7337;Parent=Thaps7337;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1972329 1972823 . - 0 ID=Thaps7337;Parent=Thaps7337;rank=1 chr7 . exon 1972329 1972823 . - . ID=Thaps7337.1;Parent=Thaps7337;constitutive=1;rank=1 chr7 . repeat_region 1973317 1973844 . ? . description=trf chr7 ensembl protein_coding_gene 1976434 1991721 . - . ID=Thaps23645;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP12];external_name=Thaps23645;logic_name=jgi_thaps3 chr7 ensembl transcript 1976434 1991721 . - . ID=Thaps23645;Parent=Thaps23645;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1976434 1976620 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=22 chr7 . exon 1976434 1976620 . - . ID=Thaps23645.22;Parent=Thaps23645;constitutive=1;ensembl_end_phase=1;rank=22 chr7 . CDS 1976681 1977138 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=21 chr7 . exon 1976681 1977138 . - . ID=Thaps23645.21;Parent=Thaps23645;constitutive=1;ensembl_end_phase=2;rank=21 chr7 . CDS 1977224 1977397 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=20 chr7 . exon 1977224 1977397 . - . ID=Thaps23645.20;Parent=Thaps23645;constitutive=1;rank=20 chr7 . CDS 1977487 1978070 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=19 chr7 . exon 1977487 1978070 . - . ID=Thaps23645.19;Parent=Thaps23645;constitutive=1;ensembl_end_phase=2;rank=19 chr7 . CDS 1978144 1978716 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=18 chr7 . exon 1978144 1978716 . - . ID=Thaps23645.18;Parent=Thaps23645;constitutive=1;rank=18 chr7 . CDS 1978809 1978833 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=17 chr7 . exon 1978809 1978833 . - . ID=Thaps23645.17;Parent=Thaps23645;constitutive=1;ensembl_end_phase=1;rank=17 chr7 . CDS 1978915 1979458 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=16 chr7 . exon 1978915 1979458 . - . ID=Thaps23645.16;Parent=Thaps23645;constitutive=1;ensembl_end_phase=1;rank=16 chr7 . CDS 1979574 1979999 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=15 chr7 . exon 1979574 1979999 . - . ID=Thaps23645.15;Parent=Thaps23645;constitutive=1;rank=15 chr7 . CDS 1980077 1981422 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=14 chr7 . exon 1980077 1981422 . - . ID=Thaps23645.14;Parent=Thaps23645;constitutive=1;ensembl_end_phase=2;rank=14 chr7 . CDS 1981510 1981698 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=13 chr7 . exon 1981510 1981698 . - . ID=Thaps23645.13;Parent=Thaps23645;constitutive=1;rank=13 chr7 . CDS 1981789 1982652 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=12 chr7 . exon 1981789 1982652 . - . ID=Thaps23645.12;Parent=Thaps23645;constitutive=1;rank=12 chr7 . CDS 1982729 1983095 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=11 chr7 . CDS 1983173 1983645 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=10 chr7 . CDS 1983724 1983966 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=9 chr7 . CDS 1984049 1984191 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=8 chr7 . CDS 1984273 1984594 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=7 chr7 . CDS 1984668 1986424 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=6 chr7 . CDS 1986509 1987587 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=5 chr7 . CDS 1987678 1988797 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=4 chr7 . CDS 1988916 1989781 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=3 chr7 . CDS 1989899 1991509 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=2 chr7 . CDS 1991588 1991721 . - 0 ID=Thaps23645;Parent=Thaps23645;rank=1 chr7 ensembl protein_coding_gene 1975648 1976208 . + . ID=Thaps7338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B5YP11];external_name=Thaps7338;logic_name=jgi_thaps3 chr7 ensembl transcript 1975648 1976208 . + . ID=Thaps7338;Parent=Thaps7338;biotype=protein_coding;logic_name=jgi_thaps3 chr7 . CDS 1975648 1976208 . + 0 ID=Thaps7338;Parent=Thaps7338;rank=1 chr7 . exon 1975648 1976208 . + . ID=Thaps7338.1;Parent=Thaps7338;constitutive=1;rank=1 chr7 . repeat_region 1992224 1992434 . ? . description=dust chr7 . exon 1982729 1983095 . - . ID=Thaps23645.11;Parent=Thaps23645;constitutive=1;ensembl_end_phase=1;rank=11 chr7 . exon 1983173 1983645 . - . ID=Thaps23645.10;Parent=Thaps23645;constitutive=1;ensembl_end_phase=2;rank=10 chr7 . exon 1983724 1983966 . - . ID=Thaps23645.9;Parent=Thaps23645;constitutive=1;rank=9 chr7 . exon 1984049 1984191 . - . ID=Thaps23645.8;Parent=Thaps23645;constitutive=1;ensembl_end_phase=2;rank=8 chr7 . exon 1984273 1984594 . - . ID=Thaps23645.7;Parent=Thaps23645;constitutive=1;ensembl_end_phase=1;rank=7 chr7 . exon 1984668 1986424 . - . ID=Thaps23645.6;Parent=Thaps23645;constitutive=1;ensembl_end_phase=2;rank=6 chr7 . exon 1986509 1987587 . - . ID=Thaps23645.5;Parent=Thaps23645;constitutive=1;ensembl_end_phase=2;rank=5 chr7 . exon 1987678 1988797 . - . ID=Thaps23645.4;Parent=Thaps23645;constitutive=1;ensembl_end_phase=1;rank=4 chr7 . exon 1988916 1989781 . - . ID=Thaps23645.3;Parent=Thaps23645;constitutive=1;ensembl_end_phase=2;rank=3 chr7 . exon 1989899 1991509 . - . ID=Thaps23645.2;Parent=Thaps23645;constitutive=1;rank=2 chr7 . exon 1991588 1991721 . - . ID=Thaps23645.1;Parent=Thaps23645;constitutive=1;ensembl_end_phase=2;rank=1 ##gff-version 3 ##sequence-region 6 1 2071480 chr6 . repeat_region 1 628 . ? . description=trf chr6 . repeat_region 1 628 . ? . description=dust chr6 . repeat_region 2245 2291 . ? . description=dust chr6 . repeat_region 2698 2923 . ? . description=dust chr6 . repeat_region 2701 2923 . ? . description=trf chr6 . repeat_region 2924 2996 . ? . description=trf chr6 . repeat_region 3053 3321 . - . description=TE2c_TP chr6 . repeat_region 3056 3351 . + . description=Harbinger4_TP chr6 . repeat_region 3219 3251 . ? . description=trf chr6 . repeat_region 5197 5624 . + . description=Harbinger4_TP chr6 . repeat_region 5448 5455 . ? . description=dust chr6 . repeat_region 5605 5655 . ? . description=dust chr6 . repeat_region 5613 5656 . ? . description=trf chr6 . repeat_region 5657 5729 . ? . description=trf chr6 . repeat_region 5789 9552 . + . description=Harbinger4_TP chr6 . repeat_region 9375 9382 . ? . description=dust chr6 ensembl gene 4026 4955 . - . ID=Thaps262677;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr6 ensembl transcript 4026 4955 . - . ID=Thaps262677;Parent=Thaps262677;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr6 . exon 4026 4261 . - . ID=Thaps262677.5;Parent=Thaps262677;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . exon 4346 4423 . - . ID=Thaps262677.4;Parent=Thaps262677;constitutive=1;rank=4 chr6 . exon 4472 4669 . - . ID=Thaps262677.3;Parent=Thaps262677;constitutive=1;rank=3 chr6 . exon 4698 4754 . - . ID=Thaps262677.2;Parent=Thaps262677;constitutive=1;rank=2 chr6 . exon 4836 4955 . - . ID=Thaps262677.1;Parent=Thaps262677;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 15654 25525 . + . ID=Thaps22947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U6];external_name=Thaps22947;logic_name=jgi_thaps3 chr6 ensembl transcript 15654 25525 . + . ID=Thaps22947;Parent=Thaps22947;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 15654 18967 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=1 chr6 . exon 15654 18967 . + . ID=Thaps22947.1;Parent=Thaps22947;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 19016 19264 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=2 chr6 . exon 19016 19264 . + . ID=Thaps22947.2;Parent=Thaps22947;constitutive=1;rank=2 chr6 . CDS 19354 19612 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=3 chr6 . exon 19354 19612 . + . ID=Thaps22947.3;Parent=Thaps22947;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 19694 19915 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=4 chr6 . exon 19694 19915 . + . ID=Thaps22947.4;Parent=Thaps22947;constitutive=1;rank=4 chr6 . CDS 19993 20498 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=5 chr6 . CDS 20544 20759 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=6 chr6 . CDS 20955 21151 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=7 chr6 . CDS 21228 21429 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=8 chr6 . CDS 21518 21740 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=9 chr6 . CDS 21820 23000 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=10 chr6 . CDS 23075 25115 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=11 chr6 . CDS 25220 25525 . + 0 ID=Thaps22947;Parent=Thaps22947;rank=12 chr6 ensembl protein_coding_gene 10416 11558 . - . ID=Thaps34785;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U4];external_name=Thaps34785;logic_name=jgi_thaps3 chr6 ensembl transcript 10416 11558 . - . ID=Thaps34785;Parent=Thaps34785;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 10416 10884 . - 0 ID=Thaps34785;Parent=Thaps34785;rank=2 chr6 . exon 10416 10884 . - . ID=Thaps34785.2;Parent=Thaps34785;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 10999 11558 . - 0 ID=Thaps34785;Parent=Thaps34785;rank=1 chr6 . exon 10999 11558 . - . ID=Thaps34785.1;Parent=Thaps34785;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 13054 13616 . - . ID=Thaps5848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U5];external_name=Thaps5848;logic_name=jgi_thaps3 chr6 ensembl transcript 13054 13616 . - . ID=Thaps5848;Parent=Thaps5848;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 13054 13125 . - 0 ID=Thaps5848;Parent=Thaps5848;rank=3 chr6 . exon 13054 13125 . - . ID=Thaps5848.3;Parent=Thaps5848;constitutive=1;rank=3 chr6 . CDS 13218 13282 . - 0 ID=Thaps5848;Parent=Thaps5848;rank=2 chr6 . exon 13218 13282 . - . ID=Thaps5848.2;Parent=Thaps5848;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 13316 13616 . - 0 ID=Thaps5848;Parent=Thaps5848;rank=1 chr6 . exon 13316 13616 . - . ID=Thaps5848.1;Parent=Thaps5848;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 27597 27605 . ? . description=dust chr6 . repeat_region 27651 27973 . ? . description=trf chr6 . repeat_region 27651 27998 . ? . description=dust chr6 . repeat_region 27651 28077 . + . description=Harbinger2N_TP chr6 . repeat_region 28705 28775 . ? . description=trf chr6 . repeat_region 29082 30303 . - . description=RTE1_TP chr6 . exon 19993 20498 . + . ID=Thaps22947.5;Parent=Thaps22947;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . exon 20544 20759 . + . ID=Thaps22947.6;Parent=Thaps22947;constitutive=1;rank=6 chr6 . exon 20955 21151 . + . ID=Thaps22947.7;Parent=Thaps22947;constitutive=1;ensembl_end_phase=2;rank=7 chr6 . exon 21228 21429 . + . ID=Thaps22947.8;Parent=Thaps22947;constitutive=1;ensembl_end_phase=1;rank=8 chr6 . exon 21518 21740 . + . ID=Thaps22947.9;Parent=Thaps22947;constitutive=1;ensembl_end_phase=1;rank=9 chr6 . exon 21820 23000 . + . ID=Thaps22947.10;Parent=Thaps22947;constitutive=1;ensembl_end_phase=2;rank=10 chr6 . exon 23075 25115 . + . ID=Thaps22947.11;Parent=Thaps22947;constitutive=1;ensembl_end_phase=1;rank=11 chr6 . exon 25220 25525 . + . ID=Thaps22947.12;Parent=Thaps22947;constitutive=1;rank=12 chr6 ensembl protein_coding_gene 26498 27202 . + . ID=Thaps5850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U7];external_name=Thaps5850;logic_name=jgi_thaps3 chr6 ensembl transcript 26498 27202 . + . ID=Thaps5850;Parent=Thaps5850;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 26498 27202 . + 0 ID=Thaps5850;Parent=Thaps5850;rank=1 chr6 . exon 26498 27202 . + . ID=Thaps5850.1;Parent=Thaps5850;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 37807 38112 . - . ID=Thaps35194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4V0];external_name=Thaps35194;logic_name=jgi_thaps3 chr6 ensembl transcript 37807 38112 . - . ID=Thaps35194;Parent=Thaps35194;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 37807 38112 . - 0 ID=Thaps35194;Parent=Thaps35194;rank=1 chr6 . exon 37807 38112 . - . ID=Thaps35194.1;Parent=Thaps35194;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 31867 33295 . - . ID=Thaps5851;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U8];external_name=Thaps5851;logic_name=jgi_thaps3 chr6 ensembl transcript 31867 33295 . - . ID=Thaps5851;Parent=Thaps5851;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 31867 32703 . - 0 ID=Thaps5851;Parent=Thaps5851;rank=2 chr6 . exon 31867 32703 . - . ID=Thaps5851.2;Parent=Thaps5851;constitutive=1;rank=2 chr6 . CDS 32825 33295 . - 0 ID=Thaps5851;Parent=Thaps5851;rank=1 chr6 . exon 32825 33295 . - . ID=Thaps5851.1;Parent=Thaps5851;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 34663 36390 . - . ID=Thaps5852;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U9];external_name=Thaps5852;logic_name=jgi_thaps3 chr6 ensembl transcript 34663 36390 . - . ID=Thaps5852;Parent=Thaps5852;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 34663 34910 . - 0 ID=Thaps5852;Parent=Thaps5852;rank=3 chr6 . exon 34663 34910 . - . ID=Thaps5852.3;Parent=Thaps5852;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 35003 35516 . - 0 ID=Thaps5852;Parent=Thaps5852;rank=2 chr6 . exon 35003 35516 . - . ID=Thaps5852.2;Parent=Thaps5852;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 35626 36390 . - 0 ID=Thaps5852;Parent=Thaps5852;rank=1 chr6 . exon 35626 36390 . - . ID=Thaps5852.1;Parent=Thaps5852;constitutive=1;rank=1 chr6 . repeat_region 47506 47513 . ? . description=dust chr6 ensembl protein_coding_gene 46956 47687 . - . ID=Thaps5854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4V1];external_name=Thaps5854;logic_name=jgi_thaps3 chr6 ensembl transcript 46956 47687 . - . ID=Thaps5854;Parent=Thaps5854;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 46956 47687 . - 0 ID=Thaps5854;Parent=Thaps5854;rank=1 chr6 . exon 46956 47687 . - . ID=Thaps5854.1;Parent=Thaps5854;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 48809 52506 . - . ID=Thaps5855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4V2];external_name=Thaps5855;logic_name=jgi_thaps3 chr6 ensembl transcript 48809 52506 . - . ID=Thaps5855;Parent=Thaps5855;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 48809 48850 . - 0 ID=Thaps5855;Parent=Thaps5855;rank=4 chr6 . exon 48809 48850 . - . ID=Thaps5855.4;Parent=Thaps5855;constitutive=1;rank=4 chr6 . CDS 48983 49566 . - 0 ID=Thaps5855;Parent=Thaps5855;rank=3 chr6 . exon 48983 49566 . - . ID=Thaps5855.3;Parent=Thaps5855;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 49650 50896 . - 0 ID=Thaps5855;Parent=Thaps5855;rank=2 chr6 . exon 49650 50896 . - . ID=Thaps5855.2;Parent=Thaps5855;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 50975 52506 . - 0 ID=Thaps5855;Parent=Thaps5855;rank=1 chr6 . repeat_region 52741 52811 . ? . description=trf chr6 . repeat_region 56954 57277 . - . description=Harbinger3_TP chr6 . repeat_region 57042 57200 . ? . description=trf chr6 . exon 50975 52506 . - . ID=Thaps5855.1;Parent=Thaps5855;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 53202 56260 . - . ID=Thaps5856;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4V3];external_name=Thaps5856;logic_name=jgi_thaps3 chr6 ensembl transcript 53202 56260 . - . ID=Thaps5856;Parent=Thaps5856;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 53202 53208 . - 0 ID=Thaps5856;Parent=Thaps5856;rank=5 chr6 . exon 53202 53208 . - . ID=Thaps5856.5;Parent=Thaps5856;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 53246 53649 . - 0 ID=Thaps5856;Parent=Thaps5856;rank=4 chr6 . exon 53246 53649 . - . ID=Thaps5856.4;Parent=Thaps5856;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 53719 53976 . - 0 ID=Thaps5856;Parent=Thaps5856;rank=3 chr6 . exon 53719 53976 . - . ID=Thaps5856.3;Parent=Thaps5856;constitutive=1;rank=3 chr6 . CDS 54058 55980 . - 0 ID=Thaps5856;Parent=Thaps5856;rank=2 chr6 . exon 54058 55980 . - . ID=Thaps5856.2;Parent=Thaps5856;constitutive=1;rank=2 chr6 . CDS 56120 56260 . - 0 ID=Thaps5856;Parent=Thaps5856;rank=1 chr6 . exon 56120 56260 . - . ID=Thaps5856.1;Parent=Thaps5856;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 57671 63407 . - . ID=Thaps5857;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4V4];external_name=Thaps5857;logic_name=jgi_thaps3 chr6 ensembl transcript 57671 63407 . - . ID=Thaps5857;Parent=Thaps5857;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 57671 57820 . - 0 ID=Thaps5857;Parent=Thaps5857;rank=9 chr6 . exon 57671 57820 . - . ID=Thaps5857.9;Parent=Thaps5857;constitutive=1;rank=9 chr6 . CDS 57903 58702 . - 0 ID=Thaps5857;Parent=Thaps5857;rank=8 chr6 . exon 57903 58702 . - . ID=Thaps5857.8;Parent=Thaps5857;constitutive=1;ensembl_end_phase=2;rank=8 chr6 . CDS 58788 59065 . - 0 ID=Thaps5857;Parent=Thaps5857;rank=7 chr6 . exon 58788 59065 . - . ID=Thaps5857.7;Parent=Thaps5857;constitutive=1;ensembl_end_phase=2;rank=7 chr6 . CDS 59143 59239 . - 0 ID=Thaps5857;Parent=Thaps5857;rank=6 chr6 . exon 59143 59239 . - . ID=Thaps5857.6;Parent=Thaps5857;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . CDS 59329 59637 . - 0 ID=Thaps5857;Parent=Thaps5857;rank=5 chr6 . exon 59329 59637 . - . ID=Thaps5857.5;Parent=Thaps5857;constitutive=1;rank=5 chr6 . CDS 59721 60481 . - 0 ID=Thaps5857;Parent=Thaps5857;rank=4 chr6 . exon 59721 60481 . - . ID=Thaps5857.4;Parent=Thaps5857;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 60578 61186 . - 0 ID=Thaps5857;Parent=Thaps5857;rank=3 chr6 . CDS 61269 61439 . - 0 ID=Thaps5857;Parent=Thaps5857;rank=2 chr6 . CDS 61513 63407 . - 0 ID=Thaps5857;Parent=Thaps5857;rank=1 chr6 . exon 60578 61186 . - . ID=Thaps5857.3;Parent=Thaps5857;constitutive=1;rank=3 chr6 . exon 61269 61439 . - . ID=Thaps5857.2;Parent=Thaps5857;constitutive=1;rank=2 chr6 . exon 61513 63407 . - . ID=Thaps5857.1;Parent=Thaps5857;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 64329 68760 . + . ID=Thaps5858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4V5];external_name=Thaps5858;logic_name=jgi_thaps3 chr6 ensembl transcript 64329 68760 . + . ID=Thaps5858;Parent=Thaps5858;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 64329 64659 . + 0 ID=Thaps5858;Parent=Thaps5858;rank=1 chr6 . exon 64329 64659 . + . ID=Thaps5858.1;Parent=Thaps5858;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 64993 65785 . + 0 ID=Thaps5858;Parent=Thaps5858;rank=2 chr6 . exon 64993 65785 . + . ID=Thaps5858.2;Parent=Thaps5858;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 65872 65987 . + 0 ID=Thaps5858;Parent=Thaps5858;rank=3 chr6 . exon 65872 65987 . + . ID=Thaps5858.3;Parent=Thaps5858;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 66070 67164 . + 0 ID=Thaps5858;Parent=Thaps5858;rank=4 chr6 . exon 66070 67164 . + . ID=Thaps5858.4;Parent=Thaps5858;constitutive=1;rank=4 chr6 . CDS 67245 68590 . + 0 ID=Thaps5858;Parent=Thaps5858;rank=5 chr6 . exon 67245 68590 . + . ID=Thaps5858.5;Parent=Thaps5858;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 68689 68760 . + 0 ID=Thaps5858;Parent=Thaps5858;rank=6 chr6 . exon 68689 68760 . + . ID=Thaps5858.6;Parent=Thaps5858;constitutive=1;rank=6 chr6 ensembl protein_coding_gene 68920 70803 . - . ID=Thaps5859;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4V6];external_name=Thaps5859;logic_name=jgi_thaps3 chr6 ensembl transcript 68920 70803 . - . ID=Thaps5859;Parent=Thaps5859;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 68920 68979 . - 0 ID=Thaps5859;Parent=Thaps5859;rank=4 chr6 . exon 68920 68979 . - . ID=Thaps5859.4;Parent=Thaps5859;constitutive=1;rank=4 chr6 . CDS 69029 69766 . - 0 ID=Thaps5859;Parent=Thaps5859;rank=3 chr6 . exon 69029 69766 . - . ID=Thaps5859.3;Parent=Thaps5859;constitutive=1;rank=3 chr6 . CDS 69845 69903 . - 0 ID=Thaps5859;Parent=Thaps5859;rank=2 chr6 . CDS 69996 70803 . - 0 ID=Thaps5859;Parent=Thaps5859;rank=1 chr6 ensembl protein_coding_gene 71238 74535 . + . ID=Thaps262679;biotype=protein_coding;description=Cation transporting ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8C4V7];external_name=Thaps262679;logic_name=jgi_thaps3 chr6 ensembl transcript 71238 74535 . + . ID=Thaps262679;Parent=Thaps262679;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 71238 71480 . + 0 ID=Thaps262679;Parent=Thaps262679;rank=1 chr6 . exon 71238 71480 . + . ID=Thaps262679.1;Parent=Thaps262679;constitutive=1;rank=1 chr6 . CDS 71526 71758 . + 0 ID=Thaps262679;Parent=Thaps262679;rank=2 chr6 . exon 71526 71758 . + . ID=Thaps262679.2;Parent=Thaps262679;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 71840 71991 . + 0 ID=Thaps262679;Parent=Thaps262679;rank=3 chr6 . exon 71840 71991 . + . ID=Thaps262679.3;Parent=Thaps262679;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 72080 72402 . + 0 ID=Thaps262679;Parent=Thaps262679;rank=4 chr6 . exon 72080 72402 . + . ID=Thaps262679.4;Parent=Thaps262679;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 72482 72637 . + 0 ID=Thaps262679;Parent=Thaps262679;rank=5 chr6 . exon 72482 72637 . + . ID=Thaps262679.5;Parent=Thaps262679;constitutive=1;rank=5 chr6 . CDS 72833 73307 . + 0 ID=Thaps262679;Parent=Thaps262679;rank=6 chr6 . exon 72833 73307 . + . ID=Thaps262679.6;Parent=Thaps262679;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . CDS 73341 74195 . + 0 ID=Thaps262679;Parent=Thaps262679;rank=7 chr6 . exon 73341 74195 . + . ID=Thaps262679.7;Parent=Thaps262679;constitutive=1;rank=7 chr6 . CDS 74220 74535 . + 0 ID=Thaps262679;Parent=Thaps262679;rank=8 chr6 . exon 74220 74535 . + . ID=Thaps262679.8;Parent=Thaps262679;constitutive=1;ensembl_end_phase=1;rank=8 chr6 ensembl protein_coding_gene 77839 78653 . - . ID=Thaps34838;biotype=protein_coding;description=Ubiquitin conjugating enzyme [Source:UniProtKB/TrEMBL%3BAcc:B8C4V8];external_name=Thaps34838;logic_name=jgi_thaps3 chr6 ensembl transcript 77839 78653 . - . ID=Thaps34838;Parent=Thaps34838;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 77839 78105 . - 0 ID=Thaps34838;Parent=Thaps34838;rank=2 chr6 . exon 77839 78105 . - . ID=Thaps34838.2;Parent=Thaps34838;constitutive=1;rank=2 chr6 . CDS 78480 78653 . - 0 ID=Thaps34838;Parent=Thaps34838;rank=1 chr6 . exon 78480 78653 . - . ID=Thaps34838.1;Parent=Thaps34838;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 78890 82777 . - . ID=Thaps40871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4V9];external_name=Thaps40871;logic_name=jgi_thaps3 chr6 ensembl transcript 78890 82777 . - . ID=Thaps40871;Parent=Thaps40871;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 78890 79123 . - 0 ID=Thaps40871;Parent=Thaps40871;rank=9 chr6 . exon 78890 79123 . - . ID=Thaps40871.9;Parent=Thaps40871;constitutive=1;rank=9 chr6 . CDS 79178 79710 . - 0 ID=Thaps40871;Parent=Thaps40871;rank=8 chr6 . exon 79178 79710 . - . ID=Thaps40871.8;Parent=Thaps40871;constitutive=1;ensembl_end_phase=2;rank=8 chr6 . CDS 79774 80098 . - 0 ID=Thaps40871;Parent=Thaps40871;rank=7 chr6 . CDS 80167 80804 . - 0 ID=Thaps40871;Parent=Thaps40871;rank=6 chr6 . CDS 80859 81012 . - 0 ID=Thaps40871;Parent=Thaps40871;rank=5 chr6 . CDS 81091 81199 . - 0 ID=Thaps40871;Parent=Thaps40871;rank=4 chr6 . CDS 81275 81712 . - 0 ID=Thaps40871;Parent=Thaps40871;rank=3 chr6 . CDS 81779 82022 . - 0 ID=Thaps40871;Parent=Thaps40871;rank=2 chr6 . CDS 82105 82777 . - 0 ID=Thaps40871;Parent=Thaps40871;rank=1 chr6 . exon 69845 69903 . - . ID=Thaps5859.2;Parent=Thaps5859;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . exon 69996 70803 . - . ID=Thaps5859.1;Parent=Thaps5859;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 84334 97987 . + . ID=Thaps22950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W0];external_name=Thaps22950;logic_name=jgi_thaps3 chr6 ensembl transcript 84334 97987 . + . ID=Thaps22950;Parent=Thaps22950;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 84334 85419 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=1 chr6 . exon 84334 85419 . + . ID=Thaps22950.1;Parent=Thaps22950;constitutive=1;rank=1 chr6 . CDS 85512 86297 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=2 chr6 . exon 85512 86297 . + . ID=Thaps22950.2;Parent=Thaps22950;constitutive=1;rank=2 chr6 . CDS 86401 87827 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=3 chr6 . exon 86401 87827 . + . ID=Thaps22950.3;Parent=Thaps22950;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 87926 88410 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=4 chr6 . exon 87926 88410 . + . ID=Thaps22950.4;Parent=Thaps22950;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 88515 89337 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=5 chr6 . exon 88515 89337 . + . ID=Thaps22950.5;Parent=Thaps22950;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 89409 89953 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=6 chr6 . exon 89409 89953 . + . ID=Thaps22950.6;Parent=Thaps22950;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 90069 90789 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=7 chr6 . CDS 90889 91490 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=8 chr6 . CDS 91682 92035 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=9 chr6 . CDS 92141 92929 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=10 chr6 . CDS 93003 93214 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=11 chr6 . CDS 93295 93644 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=12 chr6 . CDS 93732 94163 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=13 chr6 . CDS 94255 94981 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=14 chr6 . CDS 95065 96082 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=15 chr6 . CDS 96161 96799 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=16 chr6 . CDS 96882 96948 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=17 chr6 . CDS 97027 97987 . + 0 ID=Thaps22950;Parent=Thaps22950;rank=18 chr6 . exon 79774 80098 . - . ID=Thaps40871.7;Parent=Thaps40871;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . exon 80167 80804 . - . ID=Thaps40871.6;Parent=Thaps40871;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . exon 80859 81012 . - . ID=Thaps40871.5;Parent=Thaps40871;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . exon 81091 81199 . - . ID=Thaps40871.4;Parent=Thaps40871;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . exon 81275 81712 . - . ID=Thaps40871.3;Parent=Thaps40871;constitutive=1;rank=3 chr6 . exon 81779 82022 . - . ID=Thaps40871.2;Parent=Thaps40871;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . exon 82105 82777 . - . ID=Thaps40871.1;Parent=Thaps40871;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . exon 90069 90789 . + . ID=Thaps22950.7;Parent=Thaps22950;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . exon 90889 91490 . + . ID=Thaps22950.8;Parent=Thaps22950;constitutive=1;ensembl_end_phase=2;rank=8 chr6 . exon 91682 92035 . + . ID=Thaps22950.9;Parent=Thaps22950;constitutive=1;rank=9 chr6 . exon 92141 92929 . + . ID=Thaps22950.10;Parent=Thaps22950;constitutive=1;rank=10 chr6 . exon 93003 93214 . + . ID=Thaps22950.11;Parent=Thaps22950;constitutive=1;ensembl_end_phase=2;rank=11 chr6 . exon 93295 93644 . + . ID=Thaps22950.12;Parent=Thaps22950;constitutive=1;ensembl_end_phase=2;rank=12 chr6 . exon 93732 94163 . + . ID=Thaps22950.13;Parent=Thaps22950;constitutive=1;rank=13 chr6 . exon 94255 94981 . + . ID=Thaps22950.14;Parent=Thaps22950;constitutive=1;ensembl_end_phase=1;rank=14 chr6 . exon 95065 96082 . + . ID=Thaps22950.15;Parent=Thaps22950;constitutive=1;ensembl_end_phase=1;rank=15 chr6 . exon 96161 96799 . + . ID=Thaps22950.16;Parent=Thaps22950;constitutive=1;rank=16 chr6 . exon 96882 96948 . + . ID=Thaps22950.17;Parent=Thaps22950;constitutive=1;ensembl_end_phase=1;rank=17 chr6 . exon 97027 97987 . + . ID=Thaps22950.18;Parent=Thaps22950;constitutive=1;ensembl_end_phase=1;rank=18 chr6 ensembl protein_coding_gene 98214 98702 . - . ID=Thaps5865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W1];external_name=Thaps5865;logic_name=jgi_thaps3 chr6 ensembl transcript 98214 98702 . - . ID=Thaps5865;Parent=Thaps5865;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 98214 98702 . - 0 ID=Thaps5865;Parent=Thaps5865;rank=1 chr6 . exon 98214 98702 . - . ID=Thaps5865.1;Parent=Thaps5865;constitutive=1;rank=1 chr6 . repeat_region 100833 100853 . ? . description=trf chr6 . repeat_region 102726 102766 . ? . description=trf chr6 . repeat_region 107915 107955 . ? . description=dust chr6 ensembl protein_coding_gene 101213 104336 . + . ID=Thaps5866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W2];external_name=Thaps5866;logic_name=jgi_thaps3 chr6 ensembl transcript 101213 104336 . + . ID=Thaps5866;Parent=Thaps5866;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 101213 101273 . + 0 ID=Thaps5866;Parent=Thaps5866;rank=1 chr6 . exon 101213 101273 . + . ID=Thaps5866.1;Parent=Thaps5866;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 101355 101401 . + 0 ID=Thaps5866;Parent=Thaps5866;rank=2 chr6 . exon 101355 101401 . + . ID=Thaps5866.2;Parent=Thaps5866;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 101740 102332 . + 0 ID=Thaps5866;Parent=Thaps5866;rank=3 chr6 . exon 101740 102332 . + . ID=Thaps5866.3;Parent=Thaps5866;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 102451 103435 . + 0 ID=Thaps5866;Parent=Thaps5866;rank=4 chr6 . exon 102451 103435 . + . ID=Thaps5866.4;Parent=Thaps5866;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 103548 104336 . + 0 ID=Thaps5866;Parent=Thaps5866;rank=5 chr6 . exon 103548 104336 . + . ID=Thaps5866.5;Parent=Thaps5866;constitutive=1;rank=5 chr6 ensembl protein_coding_gene 104705 106424 . - . ID=Thaps5867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W3];external_name=Thaps5867;logic_name=jgi_thaps3 chr6 ensembl transcript 104705 106424 . - . ID=Thaps5867;Parent=Thaps5867;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 104705 105334 . - 0 ID=Thaps5867;Parent=Thaps5867;rank=4 chr6 . exon 104705 105334 . - . ID=Thaps5867.4;Parent=Thaps5867;constitutive=1;rank=4 chr6 . CDS 105420 105791 . - 0 ID=Thaps5867;Parent=Thaps5867;rank=3 chr6 . exon 105420 105791 . - . ID=Thaps5867.3;Parent=Thaps5867;constitutive=1;rank=3 chr6 . CDS 105900 106031 . - 0 ID=Thaps5867;Parent=Thaps5867;rank=2 chr6 . exon 105900 106031 . - . ID=Thaps5867.2;Parent=Thaps5867;constitutive=1;rank=2 chr6 . CDS 106125 106424 . - 0 ID=Thaps5867;Parent=Thaps5867;rank=1 chr6 . exon 106125 106424 . - . ID=Thaps5867.1;Parent=Thaps5867;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 107086 108087 . - . ID=Thaps5868;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W4];external_name=Thaps5868;logic_name=jgi_thaps3 chr6 ensembl transcript 107086 108087 . - . ID=Thaps5868;Parent=Thaps5868;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 107086 108087 . - 0 ID=Thaps5868;Parent=Thaps5868;rank=1 chr6 . exon 107086 108087 . - . ID=Thaps5868.1;Parent=Thaps5868;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 108434 111319 . - . ID=Thaps5869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W5];external_name=Thaps5869;logic_name=jgi_thaps3 chr6 ensembl transcript 108434 111319 . - . ID=Thaps5869;Parent=Thaps5869;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 108434 108929 . - 0 ID=Thaps5869;Parent=Thaps5869;rank=7 chr6 . exon 108434 108929 . - . ID=Thaps5869.7;Parent=Thaps5869;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . CDS 109018 110076 . - 0 ID=Thaps5869;Parent=Thaps5869;rank=6 chr6 . exon 109018 110076 . - . ID=Thaps5869.6;Parent=Thaps5869;constitutive=1;rank=6 chr6 . CDS 110185 110229 . - 0 ID=Thaps5869;Parent=Thaps5869;rank=5 chr6 . CDS 110320 110747 . - 0 ID=Thaps5869;Parent=Thaps5869;rank=4 chr6 . CDS 110831 110878 . - 0 ID=Thaps5869;Parent=Thaps5869;rank=3 chr6 . CDS 110987 111010 . - 0 ID=Thaps5869;Parent=Thaps5869;rank=2 chr6 . CDS 111107 111319 . - 0 ID=Thaps5869;Parent=Thaps5869;rank=1 chr6 . repeat_region 117701 117748 . + . description=TE2c_TP chr6 ensembl tRNA_gene 117558 117637 . - . ID=EPrTPOG00000000017;biotype=tRNA;description=tRNA-Leu for anticodon AAG [Source:TRNASCAN_SE%3BAcc:tRNA-Leu];external_name=tRNA-Leu;logic_name=ncrna_eg chr6 ensembl transcript 117558 117637 . - . ID=EPrTPOT00000000027;Parent=EPrTPOG00000000017;biotype=tRNA;logic_name=ncrna_eg chr6 . exon 117558 117637 . - . ID=EPrTPOE00000000017;Parent=EPrTPOT00000000027;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . exon 110185 110229 . - . ID=Thaps5869.5;Parent=Thaps5869;constitutive=1;rank=5 chr6 . exon 110320 110747 . - . ID=Thaps5869.4;Parent=Thaps5869;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . exon 110831 110878 . - . ID=Thaps5869.3;Parent=Thaps5869;constitutive=1;rank=3 chr6 . exon 110987 111010 . - . ID=Thaps5869.2;Parent=Thaps5869;constitutive=1;rank=2 chr6 . exon 111107 111319 . - . ID=Thaps5869.1;Parent=Thaps5869;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 112099 116879 . + . ID=Thaps5870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W6];external_name=Thaps5870;logic_name=jgi_thaps3 chr6 ensembl transcript 112099 116879 . + . ID=Thaps5870;Parent=Thaps5870;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 112099 115770 . + 0 ID=Thaps5870;Parent=Thaps5870;rank=1 chr6 . exon 112099 115770 . + . ID=Thaps5870.1;Parent=Thaps5870;constitutive=1;rank=1 chr6 . CDS 115849 116146 . + 0 ID=Thaps5870;Parent=Thaps5870;rank=2 chr6 . exon 115849 116146 . + . ID=Thaps5870.2;Parent=Thaps5870;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 116203 116879 . + 0 ID=Thaps5870;Parent=Thaps5870;rank=3 chr6 . exon 116203 116879 . + . ID=Thaps5870.3;Parent=Thaps5870;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 119389 120045 . - . ID=Thaps5871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W7];external_name=Thaps5871;logic_name=jgi_thaps3 chr6 ensembl transcript 119389 120045 . - . ID=Thaps5871;Parent=Thaps5871;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 119389 120045 . - 0 ID=Thaps5871;Parent=Thaps5871;rank=1 chr6 . exon 119389 120045 . - . ID=Thaps5871.1;Parent=Thaps5871;constitutive=1;rank=1 chr6 . repeat_region 125560 125586 . ? . description=trf chr6 . repeat_region 125560 125586 . ? . description=dust chr6 ensembl protein_coding_gene 122795 125026 . - . ID=Thaps22951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W9];external_name=Thaps22951;logic_name=jgi_thaps3 chr6 ensembl transcript 122795 125026 . - . ID=Thaps22951;Parent=Thaps22951;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 122795 125026 . - 0 ID=Thaps22951;Parent=Thaps22951;rank=1 chr6 . exon 122795 125026 . - . ID=Thaps22951.1;Parent=Thaps22951;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 121563 122582 . + . ID=Thaps5872;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4W8];external_name=Thaps5872;logic_name=jgi_thaps3 chr6 ensembl transcript 121563 122582 . + . ID=Thaps5872;Parent=Thaps5872;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 121563 121848 . + 0 ID=Thaps5872;Parent=Thaps5872;rank=1 chr6 . exon 121563 121848 . + . ID=Thaps5872.1;Parent=Thaps5872;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 122020 122582 . + 0 ID=Thaps5872;Parent=Thaps5872;rank=2 chr6 . exon 122020 122582 . + . ID=Thaps5872.2;Parent=Thaps5872;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 125419 127404 . + . ID=Thaps5874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X0];external_name=Thaps5874;logic_name=jgi_thaps3 chr6 ensembl transcript 125419 127404 . + . ID=Thaps5874;Parent=Thaps5874;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 125419 127404 . + 0 ID=Thaps5874;Parent=Thaps5874;rank=1 chr6 . exon 125419 127404 . + . ID=Thaps5874.1;Parent=Thaps5874;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 127460 131311 . - . ID=Thaps5875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X1];external_name=Thaps5875;logic_name=jgi_thaps3 chr6 ensembl transcript 127460 131311 . - . ID=Thaps5875;Parent=Thaps5875;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 127460 127844 . - 0 ID=Thaps5875;Parent=Thaps5875;rank=8 chr6 . exon 127460 127844 . - . ID=Thaps5875.8;Parent=Thaps5875;constitutive=1;ensembl_end_phase=1;rank=8 chr6 . CDS 127931 128296 . - 0 ID=Thaps5875;Parent=Thaps5875;rank=7 chr6 . exon 127931 128296 . - . ID=Thaps5875.7;Parent=Thaps5875;constitutive=1;rank=7 chr6 . CDS 128383 129115 . - 0 ID=Thaps5875;Parent=Thaps5875;rank=6 chr6 . exon 128383 129115 . - . ID=Thaps5875.6;Parent=Thaps5875;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . CDS 129200 129462 . - 0 ID=Thaps5875;Parent=Thaps5875;rank=5 chr6 . exon 129200 129462 . - . ID=Thaps5875.5;Parent=Thaps5875;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 129559 129710 . - 0 ID=Thaps5875;Parent=Thaps5875;rank=4 chr6 . CDS 129815 130467 . - 0 ID=Thaps5875;Parent=Thaps5875;rank=3 chr6 . CDS 130556 130665 . - 0 ID=Thaps5875;Parent=Thaps5875;rank=2 chr6 . CDS 130755 131311 . - 0 ID=Thaps5875;Parent=Thaps5875;rank=1 chr6 ensembl protein_coding_gene 133172 135815 . + . ID=Thaps22952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X2];external_name=Thaps22952;logic_name=jgi_thaps3 chr6 ensembl transcript 133172 135815 . + . ID=Thaps22952;Parent=Thaps22952;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 133172 133739 . + 0 ID=Thaps22952;Parent=Thaps22952;rank=1 chr6 . exon 133172 133739 . + . ID=Thaps22952.1;Parent=Thaps22952;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 133822 135815 . + 0 ID=Thaps22952;Parent=Thaps22952;rank=2 chr6 . exon 133822 135815 . + . ID=Thaps22952.2;Parent=Thaps22952;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 136500 139148 . + . ID=Thaps22953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X3];external_name=Thaps22953;logic_name=jgi_thaps3 chr6 ensembl transcript 136500 139148 . + . ID=Thaps22953;Parent=Thaps22953;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 136500 137079 . + 0 ID=Thaps22953;Parent=Thaps22953;rank=1 chr6 . exon 136500 137079 . + . ID=Thaps22953.1;Parent=Thaps22953;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 137173 137231 . + 0 ID=Thaps22953;Parent=Thaps22953;rank=2 chr6 . exon 137173 137231 . + . ID=Thaps22953.2;Parent=Thaps22953;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 137315 137591 . + 0 ID=Thaps22953;Parent=Thaps22953;rank=3 chr6 . exon 137315 137591 . + . ID=Thaps22953.3;Parent=Thaps22953;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 137977 138328 . + 0 ID=Thaps22953;Parent=Thaps22953;rank=4 chr6 . exon 137977 138328 . + . ID=Thaps22953.4;Parent=Thaps22953;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 138503 139148 . + 0 ID=Thaps22953;Parent=Thaps22953;rank=5 chr6 . exon 138503 139148 . + . ID=Thaps22953.5;Parent=Thaps22953;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . exon 129559 129710 . - . ID=Thaps5875.4;Parent=Thaps5875;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . exon 129815 130467 . - . ID=Thaps5875.3;Parent=Thaps5875;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . exon 130556 130665 . - . ID=Thaps5875.2;Parent=Thaps5875;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . exon 130755 131311 . - . ID=Thaps5875.1;Parent=Thaps5875;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 139282 139857 . - . ID=Thaps5878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X4];external_name=Thaps5878;logic_name=jgi_thaps3 chr6 ensembl transcript 139282 139857 . - . ID=Thaps5878;Parent=Thaps5878;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 139282 139857 . - 0 ID=Thaps5878;Parent=Thaps5878;rank=1 chr6 . exon 139282 139857 . - . ID=Thaps5878.1;Parent=Thaps5878;constitutive=1;rank=1 chr6 . repeat_region 144221 144259 . ? . description=trf chr6 . repeat_region 144221 144259 . ? . description=dust chr6 . repeat_region 146138 146192 . ? . description=trf chr6 ensembl protein_coding_gene 140652 141725 . - . ID=Thaps22954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X5];external_name=Thaps22954;logic_name=jgi_thaps3 chr6 ensembl transcript 140652 141725 . - . ID=Thaps22954;Parent=Thaps22954;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 140652 141725 . - 0 ID=Thaps22954;Parent=Thaps22954;rank=1 chr6 . exon 140652 141725 . - . ID=Thaps22954.1;Parent=Thaps22954;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 147319 149400 . - . ID=Thaps34571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y0];external_name=Thaps34571;logic_name=jgi_thaps3 chr6 ensembl transcript 147319 149400 . - . ID=Thaps34571;Parent=Thaps34571;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 147319 147657 . - 0 ID=Thaps34571;Parent=Thaps34571;rank=3 chr6 . exon 147319 147657 . - . ID=Thaps34571.3;Parent=Thaps34571;constitutive=1;rank=3 chr6 . CDS 147805 148679 . - 0 ID=Thaps34571;Parent=Thaps34571;rank=2 chr6 . exon 147805 148679 . - . ID=Thaps34571.2;Parent=Thaps34571;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 148767 149400 . - 0 ID=Thaps34571;Parent=Thaps34571;rank=1 chr6 . exon 148767 149400 . - . ID=Thaps34571.1;Parent=Thaps34571;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 146950 147246 . - . ID=Thaps34925;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X9];external_name=Thaps34925;logic_name=jgi_thaps3 chr6 ensembl transcript 146950 147246 . - . ID=Thaps34925;Parent=Thaps34925;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 146950 147072 . - 0 ID=Thaps34925;Parent=Thaps34925;rank=2 chr6 . exon 146950 147072 . - . ID=Thaps34925.2;Parent=Thaps34925;constitutive=1;rank=2 chr6 . CDS 147160 147246 . - 0 ID=Thaps34925;Parent=Thaps34925;rank=1 chr6 . exon 147160 147246 . - . ID=Thaps34925.1;Parent=Thaps34925;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 143004 143558 . - . ID=Thaps5880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X6];external_name=Thaps5880;logic_name=jgi_thaps3 chr6 ensembl transcript 143004 143558 . - . ID=Thaps5880;Parent=Thaps5880;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 143004 143558 . - 0 ID=Thaps5880;Parent=Thaps5880;rank=1 chr6 . exon 143004 143558 . - . ID=Thaps5880.1;Parent=Thaps5880;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 144936 145427 . - . ID=Thaps5881;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X7];external_name=Thaps5881;logic_name=jgi_thaps3 chr6 ensembl transcript 144936 145427 . - . ID=Thaps5881;Parent=Thaps5881;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 144936 145427 . - 0 ID=Thaps5881;Parent=Thaps5881;rank=1 chr6 . exon 144936 145427 . - . ID=Thaps5881.1;Parent=Thaps5881;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 145923 146621 . + . ID=Thaps5882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4X8];external_name=Thaps5882;logic_name=jgi_thaps3 chr6 ensembl transcript 145923 146621 . + . ID=Thaps5882;Parent=Thaps5882;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 145923 146621 . + 0 ID=Thaps5882;Parent=Thaps5882;rank=1 chr6 . exon 145923 146621 . + . ID=Thaps5882.1;Parent=Thaps5882;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 152701 153042 . - . ID=Thaps19623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y1];external_name=Thaps19623;logic_name=jgi_thaps3 chr6 ensembl transcript 152701 153042 . - . ID=Thaps19623;Parent=Thaps19623;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 152701 153042 . - 0 ID=Thaps19623;Parent=Thaps19623;rank=1 chr6 . exon 152701 153042 . - . ID=Thaps19623.1;Parent=Thaps19623;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 158008 159816 . - . ID=Thaps22957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y3];external_name=Thaps22957;logic_name=jgi_thaps3 chr6 ensembl transcript 158008 159816 . - . ID=Thaps22957;Parent=Thaps22957;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 158008 158244 . - 0 ID=Thaps22957;Parent=Thaps22957;rank=2 chr6 . exon 158008 158244 . - . ID=Thaps22957.2;Parent=Thaps22957;constitutive=1;rank=2 chr6 . CDS 158335 159816 . - 0 ID=Thaps22957;Parent=Thaps22957;rank=1 chr6 . exon 158335 159816 . - . ID=Thaps22957.1;Parent=Thaps22957;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 157339 157923 . + . ID=Thaps5885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y2];external_name=Thaps5885;logic_name=jgi_thaps3 chr6 ensembl transcript 157339 157923 . + . ID=Thaps5885;Parent=Thaps5885;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 157339 157923 . + 0 ID=Thaps5885;Parent=Thaps5885;rank=1 chr6 . exon 157339 157923 . + . ID=Thaps5885.1;Parent=Thaps5885;constitutive=1;rank=1 chr6 . repeat_region 160050 160062 . ? . description=dust chr6 . repeat_region 163525 163554 . ? . description=dust chr6 . repeat_region 163535 163554 . ? . description=trf chr6 . repeat_region 164324 164347 . ? . description=dust chr6 . repeat_region 164324 164352 . ? . description=trf chr6 . repeat_region 164377 164393 . ? . description=dust chr6 . repeat_region 164726 164745 . ? . description=trf chr6 . repeat_region 164726 164747 . ? . description=dust chr6 . repeat_region 168104 168111 . ? . description=dust chr6 . repeat_region 169233 169474 . - . description=Copia1LTR_TP chr6 ensembl protein_coding_gene 161641 162156 . - . ID=Thaps22958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y4];external_name=Thaps22958;logic_name=jgi_thaps3 chr6 ensembl transcript 161641 162156 . - . ID=Thaps22958;Parent=Thaps22958;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 161641 162156 . - 0 ID=Thaps22958;Parent=Thaps22958;rank=1 chr6 . exon 161641 162156 . - . ID=Thaps22958.1;Parent=Thaps22958;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 162565 165144 . - . ID=Thaps22959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y5];external_name=Thaps22959;logic_name=jgi_thaps3 chr6 ensembl transcript 162565 165144 . - . ID=Thaps22959;Parent=Thaps22959;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 162565 162655 . - 0 ID=Thaps22959;Parent=Thaps22959;rank=2 chr6 . exon 162565 162655 . - . ID=Thaps22959.2;Parent=Thaps22959;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 162743 165144 . - 0 ID=Thaps22959;Parent=Thaps22959;rank=1 chr6 . exon 162743 165144 . - . ID=Thaps22959.1;Parent=Thaps22959;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 166179 166947 . + . ID=Thaps5889;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y6];external_name=Thaps5889;logic_name=jgi_thaps3 chr6 ensembl transcript 166179 166947 . + . ID=Thaps5889;Parent=Thaps5889;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 166179 166434 . + 0 ID=Thaps5889;Parent=Thaps5889;rank=1 chr6 . exon 166179 166434 . + . ID=Thaps5889.1;Parent=Thaps5889;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 166493 166947 . + 0 ID=Thaps5889;Parent=Thaps5889;rank=2 chr6 . exon 166493 166947 . + . ID=Thaps5889.2;Parent=Thaps5889;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . repeat_region 169475 174231 . - . description=Copia1I_TP chr6 ensembl protein_coding_gene 176687 178243 . + . ID=Thaps22960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y7];external_name=Thaps22960;logic_name=jgi_thaps3 chr6 ensembl transcript 176687 178243 . + . ID=Thaps22960;Parent=Thaps22960;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 176687 178243 . + 0 ID=Thaps22960;Parent=Thaps22960;rank=1 chr6 . exon 176687 178243 . + . ID=Thaps22960.1;Parent=Thaps22960;constitutive=1;rank=1 chr6 ensembl gene 171963 172470 . - . ID=Thaps262683;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr6 ensembl transcript 171963 172470 . - . ID=Thaps262683;Parent=Thaps262683;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr6 . exon 171963 172271 . - . ID=Thaps262683.2;Parent=Thaps262683;constitutive=1;rank=2 chr6 . exon 172292 172470 . - . ID=Thaps262683.1;Parent=Thaps262683;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 178357 179874 . - . ID=Thaps5891;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y8];external_name=Thaps5891;logic_name=jgi_thaps3 chr6 ensembl transcript 178357 179874 . - . ID=Thaps5891;Parent=Thaps5891;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 178357 179874 . - 0 ID=Thaps5891;Parent=Thaps5891;rank=1 chr6 . exon 178357 179874 . - . ID=Thaps5891.1;Parent=Thaps5891;constitutive=1;rank=1 chr6 . repeat_region 188897 188917 . ? . description=trf chr6 ensembl protein_coding_gene 182909 184024 . - . ID=Thaps22961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z0];external_name=Thaps22961;logic_name=jgi_thaps3 chr6 ensembl transcript 182909 184024 . - . ID=Thaps22961;Parent=Thaps22961;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 182909 184024 . - 0 ID=Thaps22961;Parent=Thaps22961;rank=1 chr6 . exon 182909 184024 . - . ID=Thaps22961.1;Parent=Thaps22961;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 187325 188740 . - . ID=Thaps34620;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z2];external_name=Thaps34620;logic_name=jgi_thaps3 chr6 ensembl transcript 187325 188740 . - . ID=Thaps34620;Parent=Thaps34620;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 187325 187955 . - 0 ID=Thaps34620;Parent=Thaps34620;rank=4 chr6 . exon 187325 187955 . - . ID=Thaps34620.4;Parent=Thaps34620;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 188037 188256 . - 0 ID=Thaps34620;Parent=Thaps34620;rank=3 chr6 . exon 188037 188256 . - . ID=Thaps34620.3;Parent=Thaps34620;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 188398 188580 . - 0 ID=Thaps34620;Parent=Thaps34620;rank=2 chr6 . exon 188398 188580 . - . ID=Thaps34620.2;Parent=Thaps34620;constitutive=1;rank=2 chr6 . CDS 188632 188740 . - 0 ID=Thaps34620;Parent=Thaps34620;rank=1 chr6 . exon 188632 188740 . - . ID=Thaps34620.1;Parent=Thaps34620;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 181112 182821 . + . ID=Thaps5892;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Y9];external_name=Thaps5892;logic_name=jgi_thaps3 chr6 ensembl transcript 181112 182821 . + . ID=Thaps5892;Parent=Thaps5892;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 181112 182821 . + 0 ID=Thaps5892;Parent=Thaps5892;rank=1 chr6 . exon 181112 182821 . + . ID=Thaps5892.1;Parent=Thaps5892;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 184907 185599 . + . ID=Thaps5894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z1];external_name=Thaps5894;logic_name=jgi_thaps3 chr6 ensembl transcript 184907 185599 . + . ID=Thaps5894;Parent=Thaps5894;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 184907 185599 . + 0 ID=Thaps5894;Parent=Thaps5894;rank=1 chr6 . exon 184907 185599 . + . ID=Thaps5894.1;Parent=Thaps5894;constitutive=1;rank=1 chr6 . repeat_region 196360 196379 . ? . description=dust chr6 . repeat_region 197232 197261 . ? . description=dust chr6 . repeat_region 198011 198054 . ? . description=dust chr6 . repeat_region 198333 198360 . ? . description=dust chr6 ensembl protein_coding_gene 198155 201927 . + . ID=Thaps22963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z7];external_name=Thaps22963;logic_name=jgi_thaps3 chr6 ensembl transcript 198155 201927 . + . ID=Thaps22963;Parent=Thaps22963;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 198155 198247 . + 0 ID=Thaps22963;Parent=Thaps22963;rank=1 chr6 . exon 198155 198247 . + . ID=Thaps22963.1;Parent=Thaps22963;constitutive=1;rank=1 chr6 . CDS 198370 198695 . + 0 ID=Thaps22963;Parent=Thaps22963;rank=2 chr6 . exon 198370 198695 . + . ID=Thaps22963.2;Parent=Thaps22963;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 198835 198946 . + 0 ID=Thaps22963;Parent=Thaps22963;rank=3 chr6 . exon 198835 198946 . + . ID=Thaps22963.3;Parent=Thaps22963;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 199054 200630 . + 0 ID=Thaps22963;Parent=Thaps22963;rank=4 chr6 . exon 199054 200630 . + . ID=Thaps22963.4;Parent=Thaps22963;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 200735 201020 . + 0 ID=Thaps22963;Parent=Thaps22963;rank=5 chr6 . CDS 201104 201393 . + 0 ID=Thaps22963;Parent=Thaps22963;rank=6 chr6 . CDS 201486 201927 . + 0 ID=Thaps22963;Parent=Thaps22963;rank=7 chr6 ensembl protein_coding_gene 189286 191763 . + . ID=Thaps5896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z3];external_name=Thaps5896;logic_name=jgi_thaps3 chr6 ensembl transcript 189286 191763 . + . ID=Thaps5896;Parent=Thaps5896;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 189286 189708 . + 0 ID=Thaps5896;Parent=Thaps5896;rank=1 chr6 . exon 189286 189708 . + . ID=Thaps5896.1;Parent=Thaps5896;constitutive=1;rank=1 chr6 . CDS 189795 190290 . + 0 ID=Thaps5896;Parent=Thaps5896;rank=2 chr6 . exon 189795 190290 . + . ID=Thaps5896.2;Parent=Thaps5896;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 190586 191763 . + 0 ID=Thaps5896;Parent=Thaps5896;rank=3 chr6 . exon 190586 191763 . + . ID=Thaps5896.3;Parent=Thaps5896;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 191849 192676 . - . ID=Thaps5897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z4];external_name=Thaps5897;logic_name=jgi_thaps3 chr6 ensembl transcript 191849 192676 . - . ID=Thaps5897;Parent=Thaps5897;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 191849 192676 . - 0 ID=Thaps5897;Parent=Thaps5897;rank=1 chr6 . exon 191849 192676 . - . ID=Thaps5897.1;Parent=Thaps5897;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 192947 195134 . + . ID=Thaps5898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z5];external_name=Thaps5898;logic_name=jgi_thaps3 chr6 ensembl transcript 192947 195134 . + . ID=Thaps5898;Parent=Thaps5898;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 192947 193316 . + 0 ID=Thaps5898;Parent=Thaps5898;rank=1 chr6 . exon 192947 193316 . + . ID=Thaps5898.1;Parent=Thaps5898;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 193470 194423 . + 0 ID=Thaps5898;Parent=Thaps5898;rank=2 chr6 . exon 193470 194423 . + . ID=Thaps5898.2;Parent=Thaps5898;constitutive=1;rank=2 chr6 . CDS 194506 194899 . + 0 ID=Thaps5898;Parent=Thaps5898;rank=3 chr6 . exon 194506 194899 . + . ID=Thaps5898.3;Parent=Thaps5898;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 194983 195033 . + 0 ID=Thaps5898;Parent=Thaps5898;rank=4 chr6 . exon 194983 195033 . + . ID=Thaps5898.4;Parent=Thaps5898;constitutive=1;rank=4 chr6 . CDS 195089 195134 . + 0 ID=Thaps5898;Parent=Thaps5898;rank=5 chr6 . exon 195089 195134 . + . ID=Thaps5898.5;Parent=Thaps5898;constitutive=1;ensembl_end_phase=1;rank=5 chr6 ensembl protein_coding_gene 195277 197004 . - . ID=Thaps5899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z6];external_name=Thaps5899;logic_name=jgi_thaps3 chr6 ensembl transcript 195277 197004 . - . ID=Thaps5899;Parent=Thaps5899;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 195277 197004 . - 0 ID=Thaps5899;Parent=Thaps5899;rank=1 chr6 . exon 195277 197004 . - . ID=Thaps5899.1;Parent=Thaps5899;constitutive=1;rank=1 chr6 . repeat_region 199966 200014 . ? . description=trf chr6 . exon 200735 201020 . + . ID=Thaps22963.5;Parent=Thaps22963;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . exon 201104 201393 . + . ID=Thaps22963.6;Parent=Thaps22963;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . exon 201486 201927 . + . ID=Thaps22963.7;Parent=Thaps22963;constitutive=1;ensembl_end_phase=1;rank=7 chr6 ensembl protein_coding_gene 202272 208633 . + . ID=Thaps40884;biotype=protein_coding;description=DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z8];external_name=RPA1;logic_name=jgi_thaps3 chr6 ensembl transcript 202272 208633 . + . ID=Thaps40884;Parent=Thaps40884;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 202272 203055 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=1 chr6 . exon 202272 203055 . + . ID=Thaps40884.1;Parent=Thaps40884;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 203362 203601 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=2 chr6 . exon 203362 203601 . + . ID=Thaps40884.2;Parent=Thaps40884;constitutive=1;rank=2 chr6 . CDS 203713 203918 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=3 chr6 . exon 203713 203918 . + . ID=Thaps40884.3;Parent=Thaps40884;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 203979 204133 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=4 chr6 . exon 203979 204133 . + . ID=Thaps40884.4;Parent=Thaps40884;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 204218 204566 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=5 chr6 . exon 204218 204566 . + . ID=Thaps40884.5;Parent=Thaps40884;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 204862 204949 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=6 chr6 . exon 204862 204949 . + . ID=Thaps40884.6;Parent=Thaps40884;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . CDS 205021 205749 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=7 chr6 . exon 205021 205749 . + . ID=Thaps40884.7;Parent=Thaps40884;constitutive=1;rank=7 chr6 . CDS 205865 206106 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=8 chr6 . exon 205865 206106 . + . ID=Thaps40884.8;Parent=Thaps40884;constitutive=1;ensembl_end_phase=2;rank=8 chr6 . CDS 206183 206725 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=9 chr6 . exon 206183 206725 . + . ID=Thaps40884.9;Parent=Thaps40884;constitutive=1;rank=9 chr6 . CDS 206954 208633 . + 0 ID=Thaps40884;Parent=Thaps40884;rank=10 chr6 . exon 206954 208633 . + . ID=Thaps40884.10;Parent=Thaps40884;constitutive=1;rank=10 chr6 ensembl protein_coding_gene 208790 210832 . - . ID=Thaps5902;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Z9];external_name=Thaps5902;logic_name=jgi_thaps3 chr6 ensembl transcript 208790 210832 . - . ID=Thaps5902;Parent=Thaps5902;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 208790 210832 . - 0 ID=Thaps5902;Parent=Thaps5902;rank=1 chr6 . exon 208790 210832 . - . ID=Thaps5902.1;Parent=Thaps5902;constitutive=1;rank=1 chr6 . repeat_region 210226 210286 . ? . description=dust chr6 . repeat_region 211698 211734 . ? . description=dust chr6 ensembl protein_coding_gene 212201 213814 . + . ID=Thaps22965;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C500];external_name=Thaps22965;logic_name=jgi_thaps3 chr6 ensembl transcript 212201 213814 . + . ID=Thaps22965;Parent=Thaps22965;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 212201 213814 . + 0 ID=Thaps22965;Parent=Thaps22965;rank=1 chr6 . exon 212201 213814 . + . ID=Thaps22965.1;Parent=Thaps22965;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 218169 219458 . - . ID=Thaps268986;biotype=protein_coding;description=Doxyhypusine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C502];external_name=DHS1;logic_name=jgi_thaps3 chr6 ensembl transcript 218169 219458 . - . ID=Thaps268986;Parent=Thaps268986;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 218169 219458 . - 0 ID=Thaps268986;Parent=Thaps268986;rank=1 chr6 . exon 218169 219458 . - . ID=Thaps268986.1;Parent=Thaps268986;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 213847 217620 . - . ID=Thaps5904;biotype=protein_coding;description=Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL%3BAcc:B8C501];external_name=Thaps5904;logic_name=jgi_thaps3 chr6 ensembl transcript 213847 217620 . - . ID=Thaps5904;Parent=Thaps5904;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 213847 217620 . - 0 ID=Thaps5904;Parent=Thaps5904;rank=1 chr6 . exon 213847 217620 . - . ID=Thaps5904.1;Parent=Thaps5904;constitutive=1;rank=1 chr6 . repeat_region 224613 224633 . ? . description=trf chr6 . repeat_region 224784 224804 . ? . description=trf chr6 ensembl protein_coding_gene 224376 227076 . + . ID=Thaps22967;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C505];external_name=Thaps22967;logic_name=jgi_thaps3 chr6 ensembl transcript 224376 227076 . + . ID=Thaps22967;Parent=Thaps22967;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 224376 225782 . + 0 ID=Thaps22967;Parent=Thaps22967;rank=1 chr6 . exon 224376 225782 . + . ID=Thaps22967.1;Parent=Thaps22967;constitutive=1;rank=1 chr6 . CDS 225874 226242 . + 0 ID=Thaps22967;Parent=Thaps22967;rank=2 chr6 . exon 225874 226242 . + . ID=Thaps22967.2;Parent=Thaps22967;constitutive=1;rank=2 chr6 . CDS 226324 227076 . + 0 ID=Thaps22967;Parent=Thaps22967;rank=3 chr6 . exon 226324 227076 . + . ID=Thaps22967.3;Parent=Thaps22967;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 220506 221111 . + . ID=Thaps5906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C503];external_name=Thaps5906;logic_name=jgi_thaps3 chr6 ensembl transcript 220506 221111 . + . ID=Thaps5906;Parent=Thaps5906;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 220506 221111 . + 0 ID=Thaps5906;Parent=Thaps5906;rank=1 chr6 . exon 220506 221111 . + . ID=Thaps5906.1;Parent=Thaps5906;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 221143 223906 . - . ID=Thaps5907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C504];external_name=Thaps5907;logic_name=jgi_thaps3 chr6 ensembl transcript 221143 223906 . - . ID=Thaps5907;Parent=Thaps5907;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 221143 222304 . - 0 ID=Thaps5907;Parent=Thaps5907;rank=4 chr6 . exon 221143 222304 . - . ID=Thaps5907.4;Parent=Thaps5907;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 222378 223327 . - 0 ID=Thaps5907;Parent=Thaps5907;rank=3 chr6 . exon 222378 223327 . - . ID=Thaps5907.3;Parent=Thaps5907;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 223374 223544 . - 0 ID=Thaps5907;Parent=Thaps5907;rank=2 chr6 . exon 223374 223544 . - . ID=Thaps5907.2;Parent=Thaps5907;constitutive=1;rank=2 chr6 . CDS 223637 223906 . - 0 ID=Thaps5907;Parent=Thaps5907;rank=1 chr6 . exon 223637 223906 . - . ID=Thaps5907.1;Parent=Thaps5907;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 227523 229048 . - . ID=Thaps5909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C506];external_name=Thaps5909;logic_name=jgi_thaps3 chr6 ensembl transcript 227523 229048 . - . ID=Thaps5909;Parent=Thaps5909;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 227523 228422 . - 0 ID=Thaps5909;Parent=Thaps5909;rank=2 chr6 . exon 227523 228422 . - . ID=Thaps5909.2;Parent=Thaps5909;constitutive=1;rank=2 chr6 . CDS 228521 229048 . - 0 ID=Thaps5909;Parent=Thaps5909;rank=1 chr6 . exon 228521 229048 . - . ID=Thaps5909.1;Parent=Thaps5909;constitutive=1;rank=1 chr6 . repeat_region 229110 229117 . ? . description=dust chr6 . repeat_region 230003 230030 . ? . description=dust chr6 . repeat_region 230602 230657 . ? . description=dust chr6 . repeat_region 238821 238857 . ? . description=dust chr6 ensembl protein_coding_gene 231664 233399 . + . ID=Thaps19136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C507];external_name=Thaps19136;logic_name=jgi_thaps3 chr6 ensembl transcript 231664 233399 . + . ID=Thaps19136;Parent=Thaps19136;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 231664 231756 . + 0 ID=Thaps19136;Parent=Thaps19136;rank=1 chr6 . exon 231664 231756 . + . ID=Thaps19136.1;Parent=Thaps19136;constitutive=1;rank=1 chr6 . CDS 232089 232171 . + 0 ID=Thaps19136;Parent=Thaps19136;rank=2 chr6 . exon 232089 232171 . + . ID=Thaps19136.2;Parent=Thaps19136;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 233306 233399 . + 0 ID=Thaps19136;Parent=Thaps19136;rank=3 chr6 . exon 233306 233399 . + . ID=Thaps19136.3;Parent=Thaps19136;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 233770 235875 . - . ID=Thaps22969;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C508];external_name=Thaps22969;logic_name=jgi_thaps3 chr6 ensembl transcript 233770 235875 . - . ID=Thaps22969;Parent=Thaps22969;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 233770 234215 . - 0 ID=Thaps22969;Parent=Thaps22969;rank=4 chr6 . exon 233770 234215 . - . ID=Thaps22969.4;Parent=Thaps22969;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 234312 234538 . - 0 ID=Thaps22969;Parent=Thaps22969;rank=3 chr6 . exon 234312 234538 . - . ID=Thaps22969.3;Parent=Thaps22969;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 234642 235185 . - 0 ID=Thaps22969;Parent=Thaps22969;rank=2 chr6 . exon 234642 235185 . - . ID=Thaps22969.2;Parent=Thaps22969;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 235281 235875 . - 0 ID=Thaps22969;Parent=Thaps22969;rank=1 chr6 . exon 235281 235875 . - . ID=Thaps22969.1;Parent=Thaps22969;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 236330 237403 . + . ID=Thaps5912;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C509];external_name=Thaps5912;logic_name=jgi_thaps3 chr6 ensembl transcript 236330 237403 . + . ID=Thaps5912;Parent=Thaps5912;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 236330 237403 . + 0 ID=Thaps5912;Parent=Thaps5912;rank=1 chr6 . exon 236330 237403 . + . ID=Thaps5912.1;Parent=Thaps5912;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 237624 238987 . - . ID=Thaps5913;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C510];external_name=Thaps5913;logic_name=jgi_thaps3 chr6 ensembl transcript 237624 238987 . - . ID=Thaps5913;Parent=Thaps5913;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 237624 237923 . - 0 ID=Thaps5913;Parent=Thaps5913;rank=3 chr6 . exon 237624 237923 . - . ID=Thaps5913.3;Parent=Thaps5913;constitutive=1;rank=3 chr6 . CDS 238003 238442 . - 0 ID=Thaps5913;Parent=Thaps5913;rank=2 chr6 . exon 238003 238442 . - . ID=Thaps5913.2;Parent=Thaps5913;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 238591 238987 . - 0 ID=Thaps5913;Parent=Thaps5913;rank=1 chr6 . exon 238591 238987 . - . ID=Thaps5913.1;Parent=Thaps5913;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 239042 239100 . ? . description=trf chr6 . repeat_region 239983 240108 . ? . description=trf chr6 . repeat_region 239983 240114 . ? . description=trf chr6 . repeat_region 239994 240114 . ? . description=trf chr6 . repeat_region 244685 244775 . ? . description=trf chr6 . repeat_region 245631 245668 . ? . description=trf chr6 ensembl protein_coding_gene 241235 241561 . + . ID=Thaps268987;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C511];external_name=Thaps268987;logic_name=jgi_thaps3 chr6 ensembl transcript 241235 241561 . + . ID=Thaps268987;Parent=Thaps268987;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 241235 241561 . + 0 ID=Thaps268987;Parent=Thaps268987;rank=1 chr6 . exon 241235 241561 . + . ID=Thaps268987.1;Parent=Thaps268987;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 243504 247529 . - . ID=Thaps5915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C512];external_name=Thaps5915;logic_name=jgi_thaps3 chr6 ensembl transcript 243504 247529 . - . ID=Thaps5915;Parent=Thaps5915;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 243504 247529 . - 0 ID=Thaps5915;Parent=Thaps5915;rank=1 chr6 . exon 243504 247529 . - . ID=Thaps5915.1;Parent=Thaps5915;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 248074 253951 . + . ID=Thaps5916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C513];external_name=Thaps5916;logic_name=jgi_thaps3 chr6 ensembl transcript 248074 253951 . + . ID=Thaps5916;Parent=Thaps5916;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 248074 249321 . + 0 ID=Thaps5916;Parent=Thaps5916;rank=1 chr6 . exon 248074 249321 . + . ID=Thaps5916.1;Parent=Thaps5916;constitutive=1;rank=1 chr6 . CDS 249409 250359 . + 0 ID=Thaps5916;Parent=Thaps5916;rank=2 chr6 . CDS 250449 250882 . + 0 ID=Thaps5916;Parent=Thaps5916;rank=3 chr6 . CDS 250952 252733 . + 0 ID=Thaps5916;Parent=Thaps5916;rank=4 chr6 . CDS 252820 253951 . + 0 ID=Thaps5916;Parent=Thaps5916;rank=5 chr6 . repeat_region 254722 254747 . ? . description=dust chr6 ensembl protein_coding_gene 254128 255263 . - . ID=Thaps17145;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C514];external_name=Thaps17145;logic_name=jgi_thaps3 chr6 ensembl transcript 254128 255263 . - . ID=Thaps17145;Parent=Thaps17145;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 254128 254717 . - 0 ID=Thaps17145;Parent=Thaps17145;rank=3 chr6 . exon 254128 254717 . - . ID=Thaps17145.3;Parent=Thaps17145;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 254832 254904 . - 0 ID=Thaps17145;Parent=Thaps17145;rank=2 chr6 . exon 254832 254904 . - . ID=Thaps17145.2;Parent=Thaps17145;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 255069 255263 . - 0 ID=Thaps17145;Parent=Thaps17145;rank=1 chr6 . exon 255069 255263 . - . ID=Thaps17145.1;Parent=Thaps17145;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 258077 261497 . - . ID=Thaps22971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C516];external_name=Thaps22971;logic_name=jgi_thaps3 chr6 ensembl transcript 258077 261497 . - . ID=Thaps22971;Parent=Thaps22971;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 258077 258124 . - 0 ID=Thaps22971;Parent=Thaps22971;rank=4 chr6 . exon 258077 258124 . - . ID=Thaps22971.4;Parent=Thaps22971;constitutive=1;rank=4 chr6 . CDS 258169 258785 . - 0 ID=Thaps22971;Parent=Thaps22971;rank=3 chr6 . exon 258169 258785 . - . ID=Thaps22971.3;Parent=Thaps22971;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 258863 260046 . - 0 ID=Thaps22971;Parent=Thaps22971;rank=2 chr6 . exon 258863 260046 . - . ID=Thaps22971.2;Parent=Thaps22971;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 260215 261497 . - 0 ID=Thaps22971;Parent=Thaps22971;rank=1 chr6 ensembl protein_coding_gene 256398 257904 . + . ID=Thaps35186;biotype=protein_coding;description=Branched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C515];external_name=Thaps35186;logic_name=jgi_thaps3 chr6 ensembl transcript 256398 257904 . + . ID=Thaps35186;Parent=Thaps35186;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 256398 256554 . + 0 ID=Thaps35186;Parent=Thaps35186;rank=1 chr6 . exon 256398 256554 . + . ID=Thaps35186.1;Parent=Thaps35186;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 256675 256692 . + 0 ID=Thaps35186;Parent=Thaps35186;rank=2 chr6 . exon 256675 256692 . + . ID=Thaps35186.2;Parent=Thaps35186;constitutive=1;rank=2 chr6 . CDS 256807 256971 . + 0 ID=Thaps35186;Parent=Thaps35186;rank=3 chr6 . exon 256807 256971 . + . ID=Thaps35186.3;Parent=Thaps35186;constitutive=1;rank=3 chr6 . CDS 257085 257328 . + 0 ID=Thaps35186;Parent=Thaps35186;rank=4 chr6 . exon 257085 257328 . + . ID=Thaps35186.4;Parent=Thaps35186;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 257433 257904 . + 0 ID=Thaps35186;Parent=Thaps35186;rank=5 chr6 . exon 257433 257904 . + . ID=Thaps35186.5;Parent=Thaps35186;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . exon 249409 250359 . + . ID=Thaps5916.2;Parent=Thaps5916;constitutive=1;rank=2 chr6 . exon 250449 250882 . + . ID=Thaps5916.3;Parent=Thaps5916;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . exon 250952 252733 . + . ID=Thaps5916.4;Parent=Thaps5916;constitutive=1;rank=4 chr6 . exon 252820 253951 . + . ID=Thaps5916.5;Parent=Thaps5916;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . repeat_region 261317 261343 . ? . description=trf chr6 . repeat_region 265030 265067 . ? . description=trf chr6 . repeat_region 268309 268331 . ? . description=trf chr6 . repeat_region 268329 268354 . ? . description=trf chr6 . repeat_region 268488 268722 . - . description=Copia6LTR_TP chr6 . repeat_region 268723 271799 . - . description=Copia6I_TP chr6 . exon 260215 261497 . - . ID=Thaps22971.1;Parent=Thaps22971;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl gene 268898 269305 . - . ID=Thaps262692;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr6 ensembl transcript 268898 269305 . - . ID=Thaps262692;Parent=Thaps262692;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr6 . exon 268898 269305 . - . ID=Thaps262692.1;Parent=Thaps262692;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 266490 268295 . - . ID=Thaps268988;biotype=protein_coding;description=Cryptochrome/Photolyase family 3 [Source:UniProtKB/TrEMBL%3BAcc:B8C520];external_name=CPF3;logic_name=jgi_thaps3 chr6 ensembl transcript 266490 268295 . - . ID=Thaps268988;Parent=Thaps268988;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 266490 267583 . - 0 ID=Thaps268988;Parent=Thaps268988;rank=2 chr6 . exon 266490 267583 . - . ID=Thaps268988.2;Parent=Thaps268988;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 267674 268295 . - 0 ID=Thaps268988;Parent=Thaps268988;rank=1 chr6 . exon 267674 268295 . - . ID=Thaps268988.1;Parent=Thaps268988;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 262024 262578 . + . ID=Thaps5920;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C517];external_name=Thaps5920;logic_name=jgi_thaps3 chr6 ensembl transcript 262024 262578 . + . ID=Thaps5920;Parent=Thaps5920;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 262024 262578 . + 0 ID=Thaps5920;Parent=Thaps5920;rank=1 chr6 . exon 262024 262578 . + . ID=Thaps5920.1;Parent=Thaps5920;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 262678 264520 . - . ID=Thaps5921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C518];external_name=Thaps5921;logic_name=jgi_thaps3 chr6 ensembl transcript 262678 264520 . - . ID=Thaps5921;Parent=Thaps5921;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 262678 263106 . - 0 ID=Thaps5921;Parent=Thaps5921;rank=4 chr6 . exon 262678 263106 . - . ID=Thaps5921.4;Parent=Thaps5921;constitutive=1;rank=4 chr6 . CDS 263505 263581 . - 0 ID=Thaps5921;Parent=Thaps5921;rank=3 chr6 . exon 263505 263581 . - . ID=Thaps5921.3;Parent=Thaps5921;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 263675 264393 . - 0 ID=Thaps5921;Parent=Thaps5921;rank=2 chr6 . exon 263675 264393 . - . ID=Thaps5921.2;Parent=Thaps5921;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 264459 264520 . - 0 ID=Thaps5921;Parent=Thaps5921;rank=1 chr6 . exon 264459 264520 . - . ID=Thaps5921.1;Parent=Thaps5921;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 265187 265969 . + . ID=Thaps5922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C519];external_name=Thaps5922;logic_name=jgi_thaps3 chr6 ensembl transcript 265187 265969 . + . ID=Thaps5922;Parent=Thaps5922;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 265187 265969 . + 0 ID=Thaps5922;Parent=Thaps5922;rank=1 chr6 . exon 265187 265969 . + . ID=Thaps5922.1;Parent=Thaps5922;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 277062 278346 . + . ID=Thaps40894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C522];external_name=Thaps40894;logic_name=jgi_thaps3 chr6 ensembl transcript 277062 278346 . + . ID=Thaps40894;Parent=Thaps40894;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 277062 277235 . + 0 ID=Thaps40894;Parent=Thaps40894;rank=1 chr6 . exon 277062 277235 . + . ID=Thaps40894.1;Parent=Thaps40894;constitutive=1;rank=1 chr6 . CDS 277345 278346 . + 0 ID=Thaps40894;Parent=Thaps40894;rank=2 chr6 . exon 277345 278346 . + . ID=Thaps40894.2;Parent=Thaps40894;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 274576 275577 . + . ID=Thaps5924;biotype=protein_coding;description=Mitochondrial carnitine/acylcarnitine carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8C521];external_name=Thaps5924;logic_name=jgi_thaps3 chr6 ensembl transcript 274576 275577 . + . ID=Thaps5924;Parent=Thaps5924;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 274576 275577 . + 0 ID=Thaps5924;Parent=Thaps5924;rank=1 chr6 . exon 274576 275577 . + . ID=Thaps5924.1;Parent=Thaps5924;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 278544 280940 . - . ID=Thaps5926;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C523];external_name=Thaps5926;logic_name=jgi_thaps3 chr6 ensembl transcript 278544 280940 . - . ID=Thaps5926;Parent=Thaps5926;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 278544 278555 . - 0 ID=Thaps5926;Parent=Thaps5926;rank=3 chr6 . exon 278544 278555 . - . ID=Thaps5926.3;Parent=Thaps5926;constitutive=1;rank=3 chr6 . CDS 278624 280753 . - 0 ID=Thaps5926;Parent=Thaps5926;rank=2 chr6 . exon 278624 280753 . - . ID=Thaps5926.2;Parent=Thaps5926;constitutive=1;rank=2 chr6 . CDS 280794 280940 . - 0 ID=Thaps5926;Parent=Thaps5926;rank=1 chr6 . repeat_region 280725 280749 . ? . description=trf chr6 . repeat_region 281599 281619 . ? . description=trf chr6 . repeat_region 281599 281619 . ? . description=dust chr6 . repeat_region 281852 281894 . ? . description=dust chr6 ensembl protein_coding_gene 288203 289830 . - . ID=Thaps262697;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C526];external_name=Thaps262697;logic_name=jgi_thaps3 chr6 ensembl transcript 288203 289830 . - . ID=Thaps262697;Parent=Thaps262697;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 288203 288360 . - 0 ID=Thaps262697;Parent=Thaps262697;rank=5 chr6 . exon 288203 288360 . - . ID=Thaps262697.5;Parent=Thaps262697;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 288421 288561 . - 0 ID=Thaps262697;Parent=Thaps262697;rank=4 chr6 . exon 288421 288561 . - . ID=Thaps262697.4;Parent=Thaps262697;constitutive=1;rank=4 chr6 . CDS 288666 288875 . - 0 ID=Thaps262697;Parent=Thaps262697;rank=3 chr6 . exon 288666 288875 . - . ID=Thaps262697.3;Parent=Thaps262697;constitutive=1;rank=3 chr6 . CDS 288987 289158 . - 0 ID=Thaps262697;Parent=Thaps262697;rank=2 chr6 . CDS 289270 289830 . - 0 ID=Thaps262697;Parent=Thaps262697;rank=1 chr6 . exon 280794 280940 . - . ID=Thaps5926.1;Parent=Thaps5926;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 281131 282249 . + . ID=Thaps5927;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C524];external_name=Thaps5927;logic_name=jgi_thaps3 chr6 ensembl transcript 281131 282249 . + . ID=Thaps5927;Parent=Thaps5927;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 281131 282249 . + 0 ID=Thaps5927;Parent=Thaps5927;rank=1 chr6 . exon 281131 282249 . + . ID=Thaps5927.1;Parent=Thaps5927;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 282654 284141 . + . ID=Thaps5928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C525];external_name=Thaps5928;logic_name=jgi_thaps3 chr6 ensembl transcript 282654 284141 . + . ID=Thaps5928;Parent=Thaps5928;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 282654 284141 . + 0 ID=Thaps5928;Parent=Thaps5928;rank=1 chr6 . exon 282654 284141 . + . ID=Thaps5928.1;Parent=Thaps5928;constitutive=1;rank=1 chr6 . exon 288987 289158 . - . ID=Thaps262697.2;Parent=Thaps262697;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . exon 289270 289830 . - . ID=Thaps262697.1;Parent=Thaps262697;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 290673 291456 . - . ID=Thaps262698;biotype=protein_coding;description=Cell differentiation protein [Source:UniProtKB/TrEMBL%3BAcc:B8C527];external_name=CDP1;logic_name=jgi_thaps3 chr6 ensembl transcript 290673 291456 . - . ID=Thaps262698;Parent=Thaps262698;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 290673 291456 . - 0 ID=Thaps262698;Parent=Thaps262698;rank=1 chr6 . exon 290673 291456 . - . ID=Thaps262698.1;Parent=Thaps262698;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 294831 296568 . - . ID=Thaps262699;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C529];external_name=Thaps262699;logic_name=jgi_thaps3 chr6 ensembl transcript 294831 296568 . - . ID=Thaps262699;Parent=Thaps262699;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 294831 295201 . - 0 ID=Thaps262699;Parent=Thaps262699;rank=4 chr6 . exon 294831 295201 . - . ID=Thaps262699.4;Parent=Thaps262699;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 295408 295613 . - 0 ID=Thaps262699;Parent=Thaps262699;rank=3 chr6 . exon 295408 295613 . - . ID=Thaps262699.3;Parent=Thaps262699;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 295689 295880 . - 0 ID=Thaps262699;Parent=Thaps262699;rank=2 chr6 . exon 295689 295880 . - . ID=Thaps262699.2;Parent=Thaps262699;constitutive=1;rank=2 chr6 . CDS 295965 296568 . - 0 ID=Thaps262699;Parent=Thaps262699;rank=1 chr6 . exon 295965 296568 . - . ID=Thaps262699.1;Parent=Thaps262699;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 296977 297198 . + . ID=Thaps262700;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C530];external_name=Thaps262700;logic_name=jgi_thaps3 chr6 ensembl transcript 296977 297198 . + . ID=Thaps262700;Parent=Thaps262700;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 296977 297198 . + 0 ID=Thaps262700;Parent=Thaps262700;rank=1 chr6 . exon 296977 297198 . + . ID=Thaps262700.1;Parent=Thaps262700;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 293140 294034 . + . ID=Thaps5931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C528];external_name=Thaps5931;logic_name=jgi_thaps3 chr6 ensembl transcript 293140 294034 . + . ID=Thaps5931;Parent=Thaps5931;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 293140 293547 . + 0 ID=Thaps5931;Parent=Thaps5931;rank=1 chr6 . exon 293140 293547 . + . ID=Thaps5931.1;Parent=Thaps5931;constitutive=1;rank=1 chr6 . CDS 293666 294034 . + 0 ID=Thaps5931;Parent=Thaps5931;rank=2 chr6 . exon 293666 294034 . + . ID=Thaps5931.2;Parent=Thaps5931;constitutive=1;rank=2 chr6 . repeat_region 308734 308754 . ? . description=trf chr6 . repeat_region 308734 308754 . ? . description=dust chr6 ensembl protein_coding_gene 302832 304313 . - . ID=Thaps22976;biotype=protein_coding;description=Predicted proteinSphingolipid delta-8 desaturase [Source:UniProtKB/TrEMBL%3BAcc:Q4G2T2];external_name=DESB;logic_name=jgi_thaps3 chr6 ensembl transcript 302832 304313 . - . ID=Thaps22976;Parent=Thaps22976;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 302832 304313 . - 0 ID=Thaps22976;Parent=Thaps22976;rank=1 chr6 . exon 302832 304313 . - . ID=Thaps22976.1;Parent=Thaps22976;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 302082 302537 . + . ID=Thaps262704;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C533];external_name=Thaps262704;logic_name=jgi_thaps3 chr6 ensembl transcript 302082 302537 . + . ID=Thaps262704;Parent=Thaps262704;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 302082 302537 . + 0 ID=Thaps262704;Parent=Thaps262704;rank=1 chr6 . exon 302082 302537 . + . ID=Thaps262704.1;Parent=Thaps262704;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 305943 306655 . - . ID=Thaps262707;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C536];external_name=Thaps262707;logic_name=jgi_thaps3 chr6 ensembl transcript 305943 306655 . - . ID=Thaps262707;Parent=Thaps262707;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 305943 306090 . - 0 ID=Thaps262707;Parent=Thaps262707;rank=3 chr6 . exon 305943 306090 . - . ID=Thaps262707.3;Parent=Thaps262707;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 306169 306231 . - 0 ID=Thaps262707;Parent=Thaps262707;rank=2 chr6 . exon 306169 306231 . - . ID=Thaps262707.2;Parent=Thaps262707;constitutive=1;rank=2 chr6 . CDS 306253 306655 . - 0 ID=Thaps262707;Parent=Thaps262707;rank=1 chr6 . exon 306253 306655 . - . ID=Thaps262707.1;Parent=Thaps262707;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 299202 299799 . + . ID=Thaps34618;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C531];external_name=Thaps34618;logic_name=jgi_thaps3 chr6 ensembl transcript 299202 299799 . + . ID=Thaps34618;Parent=Thaps34618;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 299202 299552 . + 0 ID=Thaps34618;Parent=Thaps34618;rank=1 chr6 . exon 299202 299552 . + . ID=Thaps34618.1;Parent=Thaps34618;constitutive=1;rank=1 chr6 . CDS 299635 299799 . + 0 ID=Thaps34618;Parent=Thaps34618;rank=2 chr6 . exon 299635 299799 . + . ID=Thaps34618.2;Parent=Thaps34618;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 300563 301143 . - . ID=Thaps34632;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C532];external_name=Thaps34632;logic_name=jgi_thaps3 chr6 ensembl transcript 300563 301143 . - . ID=Thaps34632;Parent=Thaps34632;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 300563 300929 . - 0 ID=Thaps34632;Parent=Thaps34632;rank=2 chr6 . exon 300563 300929 . - . ID=Thaps34632.2;Parent=Thaps34632;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 301025 301143 . - 0 ID=Thaps34632;Parent=Thaps34632;rank=1 chr6 . exon 301025 301143 . - . ID=Thaps34632.1;Parent=Thaps34632;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 304755 305084 . + . ID=Thaps5938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C535];external_name=Thaps5938;logic_name=jgi_thaps3 chr6 ensembl transcript 304755 305084 . + . ID=Thaps5938;Parent=Thaps5938;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 304755 305084 . + 0 ID=Thaps5938;Parent=Thaps5938;rank=1 chr6 . exon 304755 305084 . + . ID=Thaps5938.1;Parent=Thaps5938;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 313312 315084 . + . ID=Thaps22978;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C538];external_name=Thaps22978;logic_name=jgi_thaps3 chr6 ensembl transcript 313312 315084 . + . ID=Thaps22978;Parent=Thaps22978;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 313312 315084 . + 0 ID=Thaps22978;Parent=Thaps22978;rank=1 chr6 . exon 313312 315084 . + . ID=Thaps22978.1;Parent=Thaps22978;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 309741 311360 . - . ID=Thaps262708;biotype=protein_coding;description=TPR domain protein [Source:UniProtKB/TrEMBL%3BAcc:B8C537];external_name=Thaps262708;logic_name=jgi_thaps3 chr6 ensembl transcript 309741 311360 . - . ID=Thaps262708;Parent=Thaps262708;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 309741 310514 . - 0 ID=Thaps262708;Parent=Thaps262708;rank=2 chr6 . exon 309741 310514 . - . ID=Thaps262708.2;Parent=Thaps262708;constitutive=1;rank=2 chr6 . CDS 310824 311360 . - 0 ID=Thaps262708;Parent=Thaps262708;rank=1 chr6 . exon 310824 311360 . - . ID=Thaps262708.1;Parent=Thaps262708;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 315132 316256 . - . ID=Thaps5942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C539];external_name=Thaps5942;logic_name=jgi_thaps3 chr6 ensembl transcript 315132 316256 . - . ID=Thaps5942;Parent=Thaps5942;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 315132 316256 . - 0 ID=Thaps5942;Parent=Thaps5942;rank=1 chr6 . exon 315132 316256 . - . ID=Thaps5942.1;Parent=Thaps5942;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 318441 319133 . + . ID=Thaps5943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C540];external_name=Thaps5943;logic_name=jgi_thaps3 chr6 ensembl transcript 318441 319133 . + . ID=Thaps5943;Parent=Thaps5943;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 318441 319133 . + 0 ID=Thaps5943;Parent=Thaps5943;rank=1 chr6 . exon 318441 319133 . + . ID=Thaps5943.1;Parent=Thaps5943;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 323477 324850 . + . ID=Thaps22979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C543];external_name=Thaps22979;logic_name=jgi_thaps3 chr6 ensembl transcript 323477 324850 . + . ID=Thaps22979;Parent=Thaps22979;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 323477 324850 . + 0 ID=Thaps22979;Parent=Thaps22979;rank=1 chr6 . exon 323477 324850 . + . ID=Thaps22979.1;Parent=Thaps22979;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 326980 327842 . + . ID=Thaps28487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C545];external_name=Thaps28487;logic_name=jgi_thaps3 chr6 ensembl transcript 326980 327842 . + . ID=Thaps28487;Parent=Thaps28487;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 326980 326986 . + 0 ID=Thaps28487;Parent=Thaps28487;rank=1 chr6 . exon 326980 326986 . + . ID=Thaps28487.1;Parent=Thaps28487;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 327121 327325 . + 0 ID=Thaps28487;Parent=Thaps28487;rank=2 chr6 . exon 327121 327325 . + . ID=Thaps28487.2;Parent=Thaps28487;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 327448 327638 . + 0 ID=Thaps28487;Parent=Thaps28487;rank=3 chr6 . exon 327448 327638 . + . ID=Thaps28487.3;Parent=Thaps28487;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 327742 327842 . + 0 ID=Thaps28487;Parent=Thaps28487;rank=4 chr6 . exon 327742 327842 . + . ID=Thaps28487.4;Parent=Thaps28487;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 325758 326114 . - . ID=Thaps35136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C544];external_name=Thaps35136;logic_name=jgi_thaps3 chr6 ensembl transcript 325758 326114 . - . ID=Thaps35136;Parent=Thaps35136;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 325758 326114 . - 0 ID=Thaps35136;Parent=Thaps35136;rank=1 chr6 . exon 325758 326114 . - . ID=Thaps35136.1;Parent=Thaps35136;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 320245 321207 . + . ID=Thaps5944;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C541];external_name=Thaps5944;logic_name=jgi_thaps3 chr6 ensembl transcript 320245 321207 . + . ID=Thaps5944;Parent=Thaps5944;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 320245 321207 . + 0 ID=Thaps5944;Parent=Thaps5944;rank=1 chr6 . exon 320245 321207 . + . ID=Thaps5944.1;Parent=Thaps5944;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 321335 322915 . - . ID=Thaps5945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C542];external_name=Thaps5945;logic_name=jgi_thaps3 chr6 ensembl transcript 321335 322915 . - . ID=Thaps5945;Parent=Thaps5945;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 321335 322915 . - 0 ID=Thaps5945;Parent=Thaps5945;rank=1 chr6 . exon 321335 322915 . - . ID=Thaps5945.1;Parent=Thaps5945;constitutive=1;rank=1 chr6 . repeat_region 332424 332476 . ? . description=dust chr6 . repeat_region 333563 333603 . ? . description=dust chr6 ensembl protein_coding_gene 334235 334917 . - . ID=Thaps262719;biotype=protein_coding;description=Guanylate or adenylate cyclase [Source:UniProtKB/TrEMBL%3BAcc:B8C548];external_name=Thaps262719;logic_name=jgi_thaps3 chr6 ensembl transcript 334235 334917 . - . ID=Thaps262719;Parent=Thaps262719;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 334235 334665 . - 0 ID=Thaps262719;Parent=Thaps262719;rank=2 chr6 . exon 334235 334665 . - . ID=Thaps262719.2;Parent=Thaps262719;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 334743 334917 . - 0 ID=Thaps262719;Parent=Thaps262719;rank=1 chr6 . exon 334743 334917 . - . ID=Thaps262719.1;Parent=Thaps262719;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 334942 335426 . - . ID=Thaps262720;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C549];external_name=Thaps262720;logic_name=jgi_thaps3 chr6 ensembl transcript 334942 335426 . - . ID=Thaps262720;Parent=Thaps262720;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 334942 335070 . - 0 ID=Thaps262720;Parent=Thaps262720;rank=2 chr6 . exon 334942 335070 . - . ID=Thaps262720.2;Parent=Thaps262720;constitutive=1;rank=2 chr6 . CDS 335145 335426 . - 0 ID=Thaps262720;Parent=Thaps262720;rank=1 chr6 . exon 335145 335426 . - . ID=Thaps262720.1;Parent=Thaps262720;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 335787 336185 . - . ID=Thaps262721;biotype=protein_coding;description=Fixl-related histidine kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C550];external_name=FHK1;logic_name=jgi_thaps3 chr6 ensembl transcript 335787 336185 . - . ID=Thaps262721;Parent=Thaps262721;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 335787 336185 . - 0 ID=Thaps262721;Parent=Thaps262721;rank=1 chr6 . exon 335787 336185 . - . ID=Thaps262721.1;Parent=Thaps262721;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 332791 333522 . + . ID=Thaps34855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C547];external_name=Thaps34855;logic_name=jgi_thaps3 chr6 ensembl transcript 332791 333522 . + . ID=Thaps34855;Parent=Thaps34855;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 332791 332923 . + 0 ID=Thaps34855;Parent=Thaps34855;rank=1 chr6 . exon 332791 332923 . + . ID=Thaps34855.1;Parent=Thaps34855;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 333059 333522 . + 0 ID=Thaps34855;Parent=Thaps34855;rank=2 chr6 . exon 333059 333522 . + . ID=Thaps34855.2;Parent=Thaps34855;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 328813 331057 . - . ID=Thaps34975;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C546];external_name=Thaps34975;logic_name=jgi_thaps3 chr6 ensembl transcript 328813 331057 . - . ID=Thaps34975;Parent=Thaps34975;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 328813 329004 . - 0 ID=Thaps34975;Parent=Thaps34975;rank=4 chr6 . exon 328813 329004 . - . ID=Thaps34975.4;Parent=Thaps34975;constitutive=1;rank=4 chr6 . CDS 329097 329276 . - 0 ID=Thaps34975;Parent=Thaps34975;rank=3 chr6 . exon 329097 329276 . - . ID=Thaps34975.3;Parent=Thaps34975;constitutive=1;rank=3 chr6 . CDS 329334 330653 . - 0 ID=Thaps34975;Parent=Thaps34975;rank=2 chr6 . exon 329334 330653 . - . ID=Thaps34975.2;Parent=Thaps34975;constitutive=1;rank=2 chr6 . CDS 330794 331057 . - 0 ID=Thaps34975;Parent=Thaps34975;rank=1 chr6 . exon 330794 331057 . - . ID=Thaps34975.1;Parent=Thaps34975;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 337361 339385 . + . ID=Thaps5952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C551];external_name=Thaps5952;logic_name=jgi_thaps3 chr6 ensembl transcript 337361 339385 . + . ID=Thaps5952;Parent=Thaps5952;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 337361 338083 . + 0 ID=Thaps5952;Parent=Thaps5952;rank=1 chr6 . exon 337361 338083 . + . ID=Thaps5952.1;Parent=Thaps5952;constitutive=1;rank=1 chr6 . CDS 338171 339385 . + 0 ID=Thaps5952;Parent=Thaps5952;rank=2 chr6 . exon 338171 339385 . + . ID=Thaps5952.2;Parent=Thaps5952;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 339743 341842 . - . ID=Thaps262722;biotype=protein_coding;description=Dead-box RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C552];external_name=Thaps262722;logic_name=jgi_thaps3 chr6 ensembl transcript 339743 341842 . - . ID=Thaps262722;Parent=Thaps262722;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 339743 340051 . - 0 ID=Thaps262722;Parent=Thaps262722;rank=9 chr6 . exon 339743 340051 . - . ID=Thaps262722.9;Parent=Thaps262722;constitutive=1;rank=9 chr6 . CDS 340129 340193 . - 0 ID=Thaps262722;Parent=Thaps262722;rank=8 chr6 . exon 340129 340193 . - . ID=Thaps262722.8;Parent=Thaps262722;constitutive=1;ensembl_end_phase=2;rank=8 chr6 . CDS 340305 340581 . - 0 ID=Thaps262722;Parent=Thaps262722;rank=7 chr6 . exon 340305 340581 . - . ID=Thaps262722.7;Parent=Thaps262722;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . CDS 340612 340823 . - 0 ID=Thaps262722;Parent=Thaps262722;rank=6 chr6 . exon 340612 340823 . - . ID=Thaps262722.6;Parent=Thaps262722;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 340907 340978 . - 0 ID=Thaps262722;Parent=Thaps262722;rank=5 chr6 . exon 340907 340978 . - . ID=Thaps262722.5;Parent=Thaps262722;constitutive=1;rank=5 chr6 . CDS 341000 341163 . - 0 ID=Thaps262722;Parent=Thaps262722;rank=4 chr6 . exon 341000 341163 . - . ID=Thaps262722.4;Parent=Thaps262722;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 341275 341444 . - 0 ID=Thaps262722;Parent=Thaps262722;rank=3 chr6 . exon 341275 341444 . - . ID=Thaps262722.3;Parent=Thaps262722;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 341478 341610 . - 0 ID=Thaps262722;Parent=Thaps262722;rank=2 chr6 . exon 341478 341610 . - . ID=Thaps262722.2;Parent=Thaps262722;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 341656 341842 . - 0 ID=Thaps262722;Parent=Thaps262722;rank=1 chr6 . exon 341656 341842 . - . ID=Thaps262722.1;Parent=Thaps262722;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 345376 346995 . + . ID=Thaps28496;biotype=protein_coding;description=Adenosylhomocysteinase [Source:UniProtKB/TrEMBL%3BAcc:B8C553];external_name=AHC3;logic_name=jgi_thaps3 chr6 ensembl transcript 345376 346995 . + . ID=Thaps28496;Parent=Thaps28496;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 345376 345397 . + 0 ID=Thaps28496;Parent=Thaps28496;rank=1 chr6 . exon 345376 345397 . + . ID=Thaps28496.1;Parent=Thaps28496;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 345572 346995 . + 0 ID=Thaps28496;Parent=Thaps28496;rank=2 chr6 . exon 345572 346995 . + . ID=Thaps28496.2;Parent=Thaps28496;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 347891 348391 . - . ID=Thaps34591;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C555];external_name=Thaps34591;logic_name=jgi_thaps3 chr6 ensembl transcript 347891 348391 . - . ID=Thaps34591;Parent=Thaps34591;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 347891 348391 . - 0 ID=Thaps34591;Parent=Thaps34591;rank=1 chr6 . exon 347891 348391 . - . ID=Thaps34591.1;Parent=Thaps34591;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 343277 344995 . - . ID=Thaps5954;biotype=protein_coding;description=Adenosylhomocysteinase [Source:UniProtKB/TrEMBL%3BAcc:B8C553];external_name=AHC3;logic_name=jgi_thaps3 chr6 ensembl transcript 343277 344995 . - . ID=Thaps5954;Parent=Thaps5954;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 343277 344700 . - 0 ID=Thaps5954;Parent=Thaps5954;rank=2 chr6 . exon 343277 344700 . - . ID=Thaps5954.2;Parent=Thaps5954;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 344974 344995 . - 0 ID=Thaps5954;Parent=Thaps5954;rank=1 chr6 . exon 344974 344995 . - . ID=Thaps5954.1;Parent=Thaps5954;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 355780 355801 . ? . description=trf chr6 ensembl protein_coding_gene 351927 353054 . - . ID=Thaps22984;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C559];external_name=Thaps22984;logic_name=jgi_thaps3 chr6 ensembl transcript 351927 353054 . - . ID=Thaps22984;Parent=Thaps22984;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 351927 353054 . - 0 ID=Thaps22984;Parent=Thaps22984;rank=1 chr6 . exon 351927 353054 . - . ID=Thaps22984.1;Parent=Thaps22984;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 357283 358966 . - . ID=Thaps22985;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C562];external_name=Thaps22985;logic_name=jgi_thaps3 chr6 ensembl transcript 357283 358966 . - . ID=Thaps22985;Parent=Thaps22985;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 357283 357456 . - 0 ID=Thaps22985;Parent=Thaps22985;rank=3 chr6 . exon 357283 357456 . - . ID=Thaps22985.3;Parent=Thaps22985;constitutive=1;rank=3 chr6 . CDS 357546 357603 . - 0 ID=Thaps22985;Parent=Thaps22985;rank=2 chr6 . exon 357546 357603 . - . ID=Thaps22985.2;Parent=Thaps22985;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 357690 358966 . - 0 ID=Thaps22985;Parent=Thaps22985;rank=1 chr6 . exon 357690 358966 . - . ID=Thaps22985.1;Parent=Thaps22985;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 355658 357131 . + . ID=Thaps262729;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C561];external_name=Thaps262729;logic_name=jgi_thaps3 chr6 ensembl transcript 355658 357131 . + . ID=Thaps262729;Parent=Thaps262729;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 355658 356120 . + 0 ID=Thaps262729;Parent=Thaps262729;rank=1 chr6 . exon 355658 356120 . + . ID=Thaps262729.1;Parent=Thaps262729;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 356283 356407 . + 0 ID=Thaps262729;Parent=Thaps262729;rank=2 chr6 . exon 356283 356407 . + . ID=Thaps262729.2;Parent=Thaps262729;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 356536 356688 . + 0 ID=Thaps262729;Parent=Thaps262729;rank=3 chr6 . exon 356536 356688 . + . ID=Thaps262729.3;Parent=Thaps262729;constitutive=1;rank=3 chr6 . CDS 356776 357131 . + 0 ID=Thaps262729;Parent=Thaps262729;rank=4 chr6 . exon 356776 357131 . + . ID=Thaps262729.4;Parent=Thaps262729;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 348844 349398 . + . ID=Thaps5957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C556];external_name=Thaps5957;logic_name=jgi_thaps3 chr6 ensembl transcript 348844 349398 . + . ID=Thaps5957;Parent=Thaps5957;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 348844 349398 . + 0 ID=Thaps5957;Parent=Thaps5957;rank=1 chr6 . exon 348844 349398 . + . ID=Thaps5957.1;Parent=Thaps5957;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 349525 350938 . - . ID=Thaps5958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C557];external_name=Thaps5958;logic_name=jgi_thaps3 chr6 ensembl transcript 349525 350938 . - . ID=Thaps5958;Parent=Thaps5958;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 349525 350334 . - 0 ID=Thaps5958;Parent=Thaps5958;rank=3 chr6 . exon 349525 350334 . - . ID=Thaps5958.3;Parent=Thaps5958;constitutive=1;rank=3 chr6 . CDS 350506 350853 . - 0 ID=Thaps5958;Parent=Thaps5958;rank=2 chr6 . exon 350506 350853 . - . ID=Thaps5958.2;Parent=Thaps5958;constitutive=1;rank=2 chr6 . CDS 350897 350938 . - 0 ID=Thaps5958;Parent=Thaps5958;rank=1 chr6 . exon 350897 350938 . - . ID=Thaps5958.1;Parent=Thaps5958;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 351205 351771 . + . ID=Thaps5959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C558];external_name=Thaps5959;logic_name=jgi_thaps3 chr6 ensembl transcript 351205 351771 . + . ID=Thaps5959;Parent=Thaps5959;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 351205 351771 . + 0 ID=Thaps5959;Parent=Thaps5959;rank=1 chr6 . exon 351205 351771 . + . ID=Thaps5959.1;Parent=Thaps5959;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 353304 355694 . - . ID=Thaps5961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C560];external_name=Thaps5961;logic_name=jgi_thaps3 chr6 ensembl transcript 353304 355694 . - . ID=Thaps5961;Parent=Thaps5961;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 353304 353987 . - 0 ID=Thaps5961;Parent=Thaps5961;rank=4 chr6 . exon 353304 353987 . - . ID=Thaps5961.4;Parent=Thaps5961;constitutive=1;rank=4 chr6 . CDS 354171 355021 . - 0 ID=Thaps5961;Parent=Thaps5961;rank=3 chr6 . exon 354171 355021 . - . ID=Thaps5961.3;Parent=Thaps5961;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 355102 355164 . - 0 ID=Thaps5961;Parent=Thaps5961;rank=2 chr6 . exon 355102 355164 . - . ID=Thaps5961.2;Parent=Thaps5961;constitutive=1;rank=2 chr6 . CDS 355391 355694 . - 0 ID=Thaps5961;Parent=Thaps5961;rank=1 chr6 . exon 355391 355694 . - . ID=Thaps5961.1;Parent=Thaps5961;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 360581 361497 . + . ID=Thaps16287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C564];external_name=Thaps16287;logic_name=jgi_thaps3 chr6 ensembl transcript 360581 361497 . + . ID=Thaps16287;Parent=Thaps16287;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 360581 361023 . + 0 ID=Thaps16287;Parent=Thaps16287;rank=1 chr6 . exon 360581 361023 . + . ID=Thaps16287.1;Parent=Thaps16287;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 361113 361148 . + 0 ID=Thaps16287;Parent=Thaps16287;rank=2 chr6 . exon 361113 361148 . + . ID=Thaps16287.2;Parent=Thaps16287;constitutive=1;rank=2 chr6 . CDS 361239 361497 . + 0 ID=Thaps16287;Parent=Thaps16287;rank=3 chr6 . exon 361239 361497 . + . ID=Thaps16287.3;Parent=Thaps16287;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 359330 359932 . + . ID=Thaps262731;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C563];external_name=Thaps262731;logic_name=jgi_thaps3 chr6 ensembl transcript 359330 359932 . + . ID=Thaps262731;Parent=Thaps262731;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 359330 359932 . + 0 ID=Thaps262731;Parent=Thaps262731;rank=1 chr6 . exon 359330 359932 . + . ID=Thaps262731.1;Parent=Thaps262731;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 364693 366242 . + . ID=Thaps262734;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C566];external_name=Thaps262734;logic_name=jgi_thaps3 chr6 ensembl transcript 364693 366242 . + . ID=Thaps262734;Parent=Thaps262734;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 364693 364797 . + 0 ID=Thaps262734;Parent=Thaps262734;rank=1 chr6 . exon 364693 364797 . + . ID=Thaps262734.1;Parent=Thaps262734;constitutive=1;rank=1 chr6 . CDS 364834 365017 . + 0 ID=Thaps262734;Parent=Thaps262734;rank=2 chr6 . exon 364834 365017 . + . ID=Thaps262734.2;Parent=Thaps262734;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 365099 365184 . + 0 ID=Thaps262734;Parent=Thaps262734;rank=3 chr6 . exon 365099 365184 . + . ID=Thaps262734.3;Parent=Thaps262734;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 365261 365363 . + 0 ID=Thaps262734;Parent=Thaps262734;rank=4 chr6 . exon 365261 365363 . + . ID=Thaps262734.4;Parent=Thaps262734;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 365445 365899 . + 0 ID=Thaps262734;Parent=Thaps262734;rank=5 chr6 . exon 365445 365899 . + . ID=Thaps262734.5;Parent=Thaps262734;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 365942 366117 . + 0 ID=Thaps262734;Parent=Thaps262734;rank=6 chr6 . exon 365942 366117 . + . ID=Thaps262734.6;Parent=Thaps262734;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 366148 366242 . + 0 ID=Thaps262734;Parent=Thaps262734;rank=7 chr6 . exon 366148 366242 . + . ID=Thaps262734.7;Parent=Thaps262734;constitutive=1;ensembl_end_phase=2;rank=7 chr6 ensembl protein_coding_gene 361704 362588 . - . ID=Thaps269004;biotype=protein_coding;description=Xanthine phosphoribosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C565];external_name=Thaps269004;logic_name=jgi_thaps3 chr6 ensembl transcript 361704 362588 . - . ID=Thaps269004;Parent=Thaps269004;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 361704 362095 . - 0 ID=Thaps269004;Parent=Thaps269004;rank=2 chr6 . exon 361704 362095 . - . ID=Thaps269004.2;Parent=Thaps269004;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 362198 362588 . - 0 ID=Thaps269004;Parent=Thaps269004;rank=1 chr6 . exon 362198 362588 . - . ID=Thaps269004.1;Parent=Thaps269004;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 368489 370090 . + . ID=Thaps35005;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C568];external_name=Thaps35005;logic_name=jgi_thaps3 chr6 ensembl transcript 368489 370090 . + . ID=Thaps35005;Parent=Thaps35005;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 368489 368944 . + 0 ID=Thaps35005;Parent=Thaps35005;rank=1 chr6 . exon 368489 368944 . + . ID=Thaps35005.1;Parent=Thaps35005;constitutive=1;rank=1 chr6 . CDS 369020 369444 . + 0 ID=Thaps35005;Parent=Thaps35005;rank=2 chr6 . CDS 369712 370090 . + 0 ID=Thaps35005;Parent=Thaps35005;rank=3 chr6 ensembl protein_coding_gene 366605 367774 . - . ID=Thaps5967;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C567];external_name=Thaps5967;logic_name=jgi_thaps3 chr6 ensembl transcript 366605 367774 . - . ID=Thaps5967;Parent=Thaps5967;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 366605 367774 . - 0 ID=Thaps5967;Parent=Thaps5967;rank=1 chr6 . exon 366605 367774 . - . ID=Thaps5967.1;Parent=Thaps5967;constitutive=1;rank=1 chr6 . repeat_region 369315 369855 . ? . description=trf chr6 . repeat_region 370214 370277 . ? . description=dust chr6 . repeat_region 370837 370981 . + . description=Harbinger1_TP chr6 . repeat_region 370917 370924 . ? . description=dust chr6 . repeat_region 377126 377177 . ? . description=dust chr6 . biological_region 378066 378069 0.999 + . logic_name=eponine chr6 ensembl protein_coding_gene 371252 373342 . + . ID=Thaps22989;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C569];external_name=MYB2;logic_name=jgi_thaps3 chr6 ensembl transcript 371252 373342 . + . ID=Thaps22989;Parent=Thaps22989;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 371252 373342 . + 0 ID=Thaps22989;Parent=Thaps22989;rank=1 chr6 . exon 371252 373342 . + . ID=Thaps22989.1;Parent=Thaps22989;constitutive=1;rank=1 chr6 . exon 369020 369444 . + . ID=Thaps35005.2;Parent=Thaps35005;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . exon 369712 370090 . + . ID=Thaps35005.3;Parent=Thaps35005;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 377096 378472 . - . ID=Thaps508;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C572];external_name=Thaps508;logic_name=jgi_thaps3 chr6 ensembl transcript 377096 378472 . - . ID=Thaps508;Parent=Thaps508;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 377096 378472 . - 0 ID=Thaps508;Parent=Thaps508;rank=1 chr6 . exon 377096 378472 . - . ID=Thaps508.1;Parent=Thaps508;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 373657 375506 . + . ID=Thaps5970;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C570];external_name=Thaps5970;logic_name=jgi_thaps3 chr6 ensembl transcript 373657 375506 . + . ID=Thaps5970;Parent=Thaps5970;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 373657 374052 . + 0 ID=Thaps5970;Parent=Thaps5970;rank=1 chr6 . exon 373657 374052 . + . ID=Thaps5970.1;Parent=Thaps5970;constitutive=1;rank=1 chr6 . CDS 374130 374544 . + 0 ID=Thaps5970;Parent=Thaps5970;rank=2 chr6 . exon 374130 374544 . + . ID=Thaps5970.2;Parent=Thaps5970;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 374617 375506 . + 0 ID=Thaps5970;Parent=Thaps5970;rank=3 chr6 . exon 374617 375506 . + . ID=Thaps5970.3;Parent=Thaps5970;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 375996 376604 . - . ID=Thaps5971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C571];external_name=Thaps5971;logic_name=jgi_thaps3 chr6 ensembl transcript 375996 376604 . - . ID=Thaps5971;Parent=Thaps5971;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 375996 376604 . - 0 ID=Thaps5971;Parent=Thaps5971;rank=1 chr6 . exon 375996 376604 . - . ID=Thaps5971.1;Parent=Thaps5971;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 379035 380039 . + . ID=Thaps22991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C573];external_name=Thaps22991;logic_name=jgi_thaps3 chr6 ensembl transcript 379035 380039 . + . ID=Thaps22991;Parent=Thaps22991;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 379035 380039 . + 0 ID=Thaps22991;Parent=Thaps22991;rank=1 chr6 . exon 379035 380039 . + . ID=Thaps22991.1;Parent=Thaps22991;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 381457 382791 . + . ID=Thaps22993;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C574];external_name=Thaps22993;logic_name=jgi_thaps3 chr6 ensembl transcript 381457 382791 . + . ID=Thaps22993;Parent=Thaps22993;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 381457 382791 . + 0 ID=Thaps22993;Parent=Thaps22993;rank=1 chr6 . exon 381457 382791 . + . ID=Thaps22993.1;Parent=Thaps22993;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 382944 384050 . - . ID=Thaps22994;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C575];external_name=Thaps22994;logic_name=jgi_thaps3 chr6 ensembl transcript 382944 384050 . - . ID=Thaps22994;Parent=Thaps22994;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 382944 383659 . - 0 ID=Thaps22994;Parent=Thaps22994;rank=2 chr6 . exon 382944 383659 . - . ID=Thaps22994.2;Parent=Thaps22994;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 383735 384050 . - 0 ID=Thaps22994;Parent=Thaps22994;rank=1 chr6 . exon 383735 384050 . - . ID=Thaps22994.1;Parent=Thaps22994;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 386046 387079 . - . ID=Thaps262743;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C577];external_name=Thaps262743;logic_name=jgi_thaps3 chr6 ensembl transcript 386046 387079 . - . ID=Thaps262743;Parent=Thaps262743;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 386046 386298 . - 0 ID=Thaps262743;Parent=Thaps262743;rank=2 chr6 . exon 386046 386298 . - . ID=Thaps262743.2;Parent=Thaps262743;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 386391 387079 . - 0 ID=Thaps262743;Parent=Thaps262743;rank=1 chr6 . exon 386391 387079 . - . ID=Thaps262743.1;Parent=Thaps262743;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 387644 388257 . - . ID=Thaps262744;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C578];external_name=Thaps262744;logic_name=jgi_thaps3 chr6 ensembl transcript 387644 388257 . - . ID=Thaps262744;Parent=Thaps262744;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 387644 387754 . - 0 ID=Thaps262744;Parent=Thaps262744;rank=3 chr6 . exon 387644 387754 . - . ID=Thaps262744.3;Parent=Thaps262744;constitutive=1;rank=3 chr6 . CDS 387853 387903 . - 0 ID=Thaps262744;Parent=Thaps262744;rank=2 chr6 . exon 387853 387903 . - . ID=Thaps262744.2;Parent=Thaps262744;constitutive=1;rank=2 chr6 . CDS 388018 388257 . - 0 ID=Thaps262744;Parent=Thaps262744;rank=1 chr6 . exon 388018 388257 . - . ID=Thaps262744.1;Parent=Thaps262744;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 384339 385755 . + . ID=Thaps5977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C576];external_name=Thaps5977;logic_name=jgi_thaps3 chr6 ensembl transcript 384339 385755 . + . ID=Thaps5977;Parent=Thaps5977;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 384339 384987 . + 0 ID=Thaps5977;Parent=Thaps5977;rank=1 chr6 . exon 384339 384987 . + . ID=Thaps5977.1;Parent=Thaps5977;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 385202 385755 . + 0 ID=Thaps5977;Parent=Thaps5977;rank=2 chr6 . exon 385202 385755 . + . ID=Thaps5977.2;Parent=Thaps5977;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . repeat_region 390531 390574 . ? . description=trf chr6 . repeat_region 390531 390577 . ? . description=trf chr6 . repeat_region 390531 390577 . ? . description=dust chr6 . repeat_region 397169 397176 . ? . description=dust chr6 ensembl protein_coding_gene 389239 390042 . + . ID=Thaps22996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C579];external_name=Thaps22996;logic_name=jgi_thaps3 chr6 ensembl transcript 389239 390042 . + . ID=Thaps22996;Parent=Thaps22996;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 389239 390042 . + 0 ID=Thaps22996;Parent=Thaps22996;rank=1 chr6 . exon 389239 390042 . + . ID=Thaps22996.1;Parent=Thaps22996;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 395505 397910 . - . ID=Thaps22998;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C581];external_name=Thaps22998;logic_name=jgi_thaps3 chr6 ensembl transcript 395505 397910 . - . ID=Thaps22998;Parent=Thaps22998;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 395505 397910 . - 0 ID=Thaps22998;Parent=Thaps22998;rank=1 chr6 . exon 395505 397910 . - . ID=Thaps22998.1;Parent=Thaps22998;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 398135 399543 . + . ID=Thaps22999;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C582];external_name=Thaps22999;logic_name=jgi_thaps3 chr6 ensembl transcript 398135 399543 . + . ID=Thaps22999;Parent=Thaps22999;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 398135 398741 . + 0 ID=Thaps22999;Parent=Thaps22999;rank=1 chr6 . exon 398135 398741 . + . ID=Thaps22999.1;Parent=Thaps22999;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 398828 399182 . + 0 ID=Thaps22999;Parent=Thaps22999;rank=2 chr6 . CDS 399291 399543 . + 0 ID=Thaps22999;Parent=Thaps22999;rank=3 chr6 ensembl protein_coding_gene 391499 391734 . + . ID=Thaps262747;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C580];external_name=Thaps262747;logic_name=jgi_thaps3 chr6 ensembl transcript 391499 391734 . + . ID=Thaps262747;Parent=Thaps262747;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 391499 391734 . + 0 ID=Thaps262747;Parent=Thaps262747;rank=1 chr6 . exon 391499 391734 . + . ID=Thaps262747.1;Parent=Thaps262747;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . exon 398828 399182 . + . ID=Thaps22999.2;Parent=Thaps22999;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . exon 399291 399543 . + . ID=Thaps22999.3;Parent=Thaps22999;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 400526 402628 . + . ID=Thaps23000;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C583];external_name=Thaps23000;logic_name=jgi_thaps3 chr6 ensembl transcript 400526 402628 . + . ID=Thaps23000;Parent=Thaps23000;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 400526 401194 . + 0 ID=Thaps23000;Parent=Thaps23000;rank=1 chr6 . exon 400526 401194 . + . ID=Thaps23000.1;Parent=Thaps23000;constitutive=1;rank=1 chr6 . CDS 401303 401772 . + 0 ID=Thaps23000;Parent=Thaps23000;rank=2 chr6 . exon 401303 401772 . + . ID=Thaps23000.2;Parent=Thaps23000;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 401844 402231 . + 0 ID=Thaps23000;Parent=Thaps23000;rank=3 chr6 . exon 401844 402231 . + . ID=Thaps23000.3;Parent=Thaps23000;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 402311 402628 . + 0 ID=Thaps23000;Parent=Thaps23000;rank=4 chr6 . exon 402311 402628 . + . ID=Thaps23000.4;Parent=Thaps23000;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 402693 403760 . - . ID=Thaps23001;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C584];external_name=Thaps23001;logic_name=jgi_thaps3 chr6 ensembl transcript 402693 403760 . - . ID=Thaps23001;Parent=Thaps23001;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 402693 403170 . - 0 ID=Thaps23001;Parent=Thaps23001;rank=2 chr6 . exon 402693 403170 . - . ID=Thaps23001.2;Parent=Thaps23001;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 403324 403760 . - 0 ID=Thaps23001;Parent=Thaps23001;rank=1 chr6 . exon 403324 403760 . - . ID=Thaps23001.1;Parent=Thaps23001;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 404160 406232 . - . ID=Thaps262750;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C585];external_name=Thaps262750;logic_name=jgi_thaps3 chr6 ensembl transcript 404160 406232 . - . ID=Thaps262750;Parent=Thaps262750;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 404160 405086 . - 0 ID=Thaps262750;Parent=Thaps262750;rank=5 chr6 . exon 404160 405086 . - . ID=Thaps262750.5;Parent=Thaps262750;constitutive=1;rank=5 chr6 . CDS 405135 405397 . - 0 ID=Thaps262750;Parent=Thaps262750;rank=4 chr6 . exon 405135 405397 . - . ID=Thaps262750.4;Parent=Thaps262750;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 405461 405565 . - 0 ID=Thaps262750;Parent=Thaps262750;rank=3 chr6 . exon 405461 405565 . - . ID=Thaps262750.3;Parent=Thaps262750;constitutive=1;rank=3 chr6 . CDS 405587 405655 . - 0 ID=Thaps262750;Parent=Thaps262750;rank=2 chr6 . exon 405587 405655 . - . ID=Thaps262750.2;Parent=Thaps262750;constitutive=1;rank=2 chr6 . CDS 405686 406232 . - 0 ID=Thaps262750;Parent=Thaps262750;rank=1 chr6 . exon 405686 406232 . - . ID=Thaps262750.1;Parent=Thaps262750;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 414158 414176 . ? . description=dust chr6 . biological_region 416531 416533 0.999 - . logic_name=eponine chr6 . biological_region 416932 416939 0.999 + . logic_name=eponine chr6 . repeat_region 417764 417785 . ? . description=trf chr6 . repeat_region 417764 417785 . ? . description=dust chr6 ensembl protein_coding_gene 408416 409035 . + . ID=Thaps262751;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C586];external_name=Thaps262751;logic_name=jgi_thaps3 chr6 ensembl transcript 408416 409035 . + . ID=Thaps262751;Parent=Thaps262751;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 408416 409035 . + 0 ID=Thaps262751;Parent=Thaps262751;rank=1 chr6 . exon 408416 409035 . + . ID=Thaps262751.1;Parent=Thaps262751;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 409469 411157 . + . ID=Thaps269017;biotype=protein_coding;description=Fumarate reductase flavoprotein subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C587];external_name=FRD1;logic_name=jgi_thaps3 chr6 ensembl transcript 409469 411157 . + . ID=Thaps269017;Parent=Thaps269017;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 409469 410211 . + 0 ID=Thaps269017;Parent=Thaps269017;rank=1 chr6 . exon 409469 410211 . + . ID=Thaps269017.1;Parent=Thaps269017;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 410296 411157 . + 0 ID=Thaps269017;Parent=Thaps269017;rank=2 chr6 . exon 410296 411157 . + . ID=Thaps269017.2;Parent=Thaps269017;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 415539 415838 . - . ID=Thaps35091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C588];external_name=Thaps35091;logic_name=jgi_thaps3 chr6 ensembl transcript 415539 415838 . - . ID=Thaps35091;Parent=Thaps35091;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 415539 415838 . - 0 ID=Thaps35091;Parent=Thaps35091;rank=1 chr6 . exon 415539 415838 . - . ID=Thaps35091.1;Parent=Thaps35091;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 417335 418885 . + . ID=Thaps5989;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C589];external_name=Thaps5989;logic_name=jgi_thaps3 chr6 ensembl transcript 417335 418885 . + . ID=Thaps5989;Parent=Thaps5989;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 417335 418885 . + 0 ID=Thaps5989;Parent=Thaps5989;rank=1 chr6 . exon 417335 418885 . + . ID=Thaps5989.1;Parent=Thaps5989;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 426142 428134 . - . ID=Thaps13740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C594];external_name=Thaps13740;logic_name=jgi_thaps3 chr6 ensembl transcript 426142 428134 . - . ID=Thaps13740;Parent=Thaps13740;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 426142 426707 . - 0 ID=Thaps13740;Parent=Thaps13740;rank=2 chr6 . exon 426142 426707 . - . ID=Thaps13740.2;Parent=Thaps13740;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 427282 428134 . - 0 ID=Thaps13740;Parent=Thaps13740;rank=1 chr6 . exon 427282 428134 . - . ID=Thaps13740.1;Parent=Thaps13740;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 419191 420081 . - . ID=Thaps262753;biotype=protein_coding;description=Ascorbate peroxidase [Source:UniProtKB/TrEMBL%3BAcc:B8C590];external_name=APXS;logic_name=jgi_thaps3 chr6 ensembl transcript 419191 420081 . - . ID=Thaps262753;Parent=Thaps262753;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 419191 420081 . - 0 ID=Thaps262753;Parent=Thaps262753;rank=1 chr6 . exon 419191 420081 . - . ID=Thaps262753.1;Parent=Thaps262753;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 420911 422767 . + . ID=Thaps269018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C591];external_name=Thaps269018;logic_name=jgi_thaps3 chr6 ensembl transcript 420911 422767 . + . ID=Thaps269018;Parent=Thaps269018;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 420911 421412 . + 0 ID=Thaps269018;Parent=Thaps269018;rank=1 chr6 . exon 420911 421412 . + . ID=Thaps269018.1;Parent=Thaps269018;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 421530 422767 . + 0 ID=Thaps269018;Parent=Thaps269018;rank=2 chr6 . exon 421530 422767 . + . ID=Thaps269018.2;Parent=Thaps269018;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 422829 423866 . - . ID=Thaps5992;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C592];external_name=Thaps5992;logic_name=jgi_thaps3 chr6 ensembl transcript 422829 423866 . - . ID=Thaps5992;Parent=Thaps5992;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 422829 423866 . - 0 ID=Thaps5992;Parent=Thaps5992;rank=1 chr6 . exon 422829 423866 . - . ID=Thaps5992.1;Parent=Thaps5992;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 424375 425110 . + . ID=Thaps5993;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C593];external_name=Thaps5993;logic_name=jgi_thaps3 chr6 ensembl transcript 424375 425110 . + . ID=Thaps5993;Parent=Thaps5993;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 424375 424687 . + 0 ID=Thaps5993;Parent=Thaps5993;rank=1 chr6 . exon 424375 424687 . + . ID=Thaps5993.1;Parent=Thaps5993;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 424875 425110 . + 0 ID=Thaps5993;Parent=Thaps5993;rank=2 chr6 . exon 424875 425110 . + . ID=Thaps5993.2;Parent=Thaps5993;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . repeat_region 429076 429138 . ? . description=dust chr6 . repeat_region 431189 431233 . ? . description=trf chr6 ensembl protein_coding_gene 429231 431075 . + . ID=Thaps13448;biotype=protein_coding;description=Syntaxin-interacting protein unc-18 [Source:UniProtKB/TrEMBL%3BAcc:B8C595];external_name=Thaps13448;logic_name=jgi_thaps3 chr6 ensembl transcript 429231 431075 . + . ID=Thaps13448;Parent=Thaps13448;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 429231 431075 . + 0 ID=Thaps13448;Parent=Thaps13448;rank=1 chr6 . exon 429231 431075 . + . ID=Thaps13448.1;Parent=Thaps13448;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 435522 436091 . - . ID=Thaps35182;biotype=protein_coding;description=Set domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C597];external_name=Thaps35182;logic_name=jgi_thaps3 chr6 ensembl transcript 435522 436091 . - . ID=Thaps35182;Parent=Thaps35182;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 435522 436091 . - 0 ID=Thaps35182;Parent=Thaps35182;rank=1 chr6 . exon 435522 436091 . - . ID=Thaps35182.1;Parent=Thaps35182;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 432580 433986 . + . ID=Thaps5996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C596];external_name=Thaps5996;logic_name=jgi_thaps3 chr6 ensembl transcript 432580 433986 . + . ID=Thaps5996;Parent=Thaps5996;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 432580 433986 . + 0 ID=Thaps5996;Parent=Thaps5996;rank=1 chr6 . exon 432580 433986 . + . ID=Thaps5996.1;Parent=Thaps5996;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 439167 443293 . - . ID=Thaps40925;biotype=protein_coding;description=DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8C598];external_name=RPB21;logic_name=jgi_thaps3 chr6 ensembl transcript 439167 443293 . - . ID=Thaps40925;Parent=Thaps40925;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 439167 439919 . - 0 ID=Thaps40925;Parent=Thaps40925;rank=5 chr6 . exon 439167 439919 . - . ID=Thaps40925.5;Parent=Thaps40925;constitutive=1;rank=5 chr6 . CDS 440011 440648 . - 0 ID=Thaps40925;Parent=Thaps40925;rank=4 chr6 . exon 440011 440648 . - . ID=Thaps40925.4;Parent=Thaps40925;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 440737 441555 . - 0 ID=Thaps40925;Parent=Thaps40925;rank=3 chr6 . exon 440737 441555 . - . ID=Thaps40925.3;Parent=Thaps40925;constitutive=1;rank=3 chr6 . CDS 441638 442965 . - 0 ID=Thaps40925;Parent=Thaps40925;rank=2 chr6 . exon 441638 442965 . - . ID=Thaps40925.2;Parent=Thaps40925;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 443241 443293 . - 0 ID=Thaps40925;Parent=Thaps40925;rank=1 chr6 . exon 443241 443293 . - . ID=Thaps40925.1;Parent=Thaps40925;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 445335 447380 . + . ID=Thaps40929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C599];external_name=Thaps40929;logic_name=jgi_thaps3 chr6 ensembl transcript 445335 447380 . + . ID=Thaps40929;Parent=Thaps40929;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 445335 447380 . + 0 ID=Thaps40929;Parent=Thaps40929;rank=1 chr6 . exon 445335 447380 . + . ID=Thaps40929.1;Parent=Thaps40929;constitutive=1;rank=1 chr6 . repeat_region 448680 448687 . ? . description=dust chr6 . repeat_region 450472 450525 . + . description=TE2_TP chr6 . repeat_region 450562 450622 . - . description=Gypsy1ALTR_TP chr6 . repeat_region 452518 452539 . ? . description=trf chr6 ensembl protein_coding_gene 450834 452522 . + . ID=Thaps23010;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5A1];external_name=Thaps23010;logic_name=jgi_thaps3 chr6 ensembl transcript 450834 452522 . + . ID=Thaps23010;Parent=Thaps23010;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 450834 452522 . + 0 ID=Thaps23010;Parent=Thaps23010;rank=1 chr6 . exon 450834 452522 . + . ID=Thaps23010.1;Parent=Thaps23010;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 448887 450439 . - . ID=Thaps262762;biotype=protein_coding;description=RAB geranylgeranyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8C5A0];external_name=Thaps262762;logic_name=jgi_thaps3 chr6 ensembl transcript 448887 450439 . - . ID=Thaps262762;Parent=Thaps262762;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 448887 449562 . - 0 ID=Thaps262762;Parent=Thaps262762;rank=3 chr6 . exon 448887 449562 . - . ID=Thaps262762.3;Parent=Thaps262762;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 449821 449941 . - 0 ID=Thaps262762;Parent=Thaps262762;rank=2 chr6 . exon 449821 449941 . - . ID=Thaps262762.2;Parent=Thaps262762;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 449996 450439 . - 0 ID=Thaps262762;Parent=Thaps262762;rank=1 chr6 . exon 449996 450439 . - . ID=Thaps262762.1;Parent=Thaps262762;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 457093 457865 . - . ID=Thaps262764;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5A2];external_name=Thaps262764;logic_name=jgi_thaps3 chr6 ensembl transcript 457093 457865 . - . ID=Thaps262764;Parent=Thaps262764;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 457093 457343 . - 0 ID=Thaps262764;Parent=Thaps262764;rank=3 chr6 . exon 457093 457343 . - . ID=Thaps262764.3;Parent=Thaps262764;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 457704 457756 . - 0 ID=Thaps262764;Parent=Thaps262764;rank=2 chr6 . exon 457704 457756 . - . ID=Thaps262764.2;Parent=Thaps262764;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 457787 457865 . - 0 ID=Thaps262764;Parent=Thaps262764;rank=1 chr6 . exon 457787 457865 . - . ID=Thaps262764.1;Parent=Thaps262764;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 464155 469569 . + . ID=Thaps23012;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5A4];external_name=Thaps23012;logic_name=jgi_thaps3 chr6 ensembl transcript 464155 469569 . + . ID=Thaps23012;Parent=Thaps23012;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 464155 469569 . + 0 ID=Thaps23012;Parent=Thaps23012;rank=1 chr6 . exon 464155 469569 . + . ID=Thaps23012.1;Parent=Thaps23012;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 458668 463597 . - . ID=Thaps6004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5A3];external_name=Thaps6004;logic_name=jgi_thaps3 chr6 ensembl transcript 458668 463597 . - . ID=Thaps6004;Parent=Thaps6004;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 458668 460007 . - 0 ID=Thaps6004;Parent=Thaps6004;rank=3 chr6 . exon 458668 460007 . - . ID=Thaps6004.3;Parent=Thaps6004;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 460093 462300 . - 0 ID=Thaps6004;Parent=Thaps6004;rank=2 chr6 . exon 460093 462300 . - . ID=Thaps6004.2;Parent=Thaps6004;constitutive=1;rank=2 chr6 . CDS 462376 463597 . - 0 ID=Thaps6004;Parent=Thaps6004;rank=1 chr6 . exon 462376 463597 . - . ID=Thaps6004.1;Parent=Thaps6004;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 469917 472088 . - . ID=Thaps23013;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5A5];external_name=Thaps23013;logic_name=jgi_thaps3 chr6 ensembl transcript 469917 472088 . - . ID=Thaps23013;Parent=Thaps23013;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 469917 472088 . - 0 ID=Thaps23013;Parent=Thaps23013;rank=1 chr6 . exon 469917 472088 . - . ID=Thaps23013.1;Parent=Thaps23013;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 475087 475638 . - . ID=Thaps262767;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5A6];external_name=Thaps262767;logic_name=jgi_thaps3 chr6 ensembl transcript 475087 475638 . - . ID=Thaps262767;Parent=Thaps262767;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 475087 475638 . - 0 ID=Thaps262767;Parent=Thaps262767;rank=1 chr6 . exon 475087 475638 . - . ID=Thaps262767.1;Parent=Thaps262767;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 477189 477804 . + . ID=Thaps269028;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5A7];external_name=Thaps269028;logic_name=jgi_thaps3 chr6 ensembl transcript 477189 477804 . + . ID=Thaps269028;Parent=Thaps269028;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 477189 477284 . + 0 ID=Thaps269028;Parent=Thaps269028;rank=1 chr6 . exon 477189 477284 . + . ID=Thaps269028.1;Parent=Thaps269028;constitutive=1;rank=1 chr6 . CDS 477369 477556 . + 0 ID=Thaps269028;Parent=Thaps269028;rank=2 chr6 . exon 477369 477556 . + . ID=Thaps269028.2;Parent=Thaps269028;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 477645 477804 . + 0 ID=Thaps269028;Parent=Thaps269028;rank=3 chr6 . exon 477645 477804 . + . ID=Thaps269028.3;Parent=Thaps269028;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . repeat_region 478098 478107 . ? . description=dust chr6 . repeat_region 482027 482045 . ? . description=dust chr6 . repeat_region 482276 482314 . ? . description=trf chr6 . repeat_region 483961 483979 . ? . description=dust chr6 . repeat_region 487904 487923 . ? . description=trf chr6 . repeat_region 487904 487923 . ? . description=dust chr6 ensembl protein_coding_gene 482389 484590 . + . ID=Thaps269030;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B0];external_name=Thaps269030;logic_name=jgi_thaps3 chr6 ensembl transcript 482389 484590 . + . ID=Thaps269030;Parent=Thaps269030;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 482389 483255 . + 0 ID=Thaps269030;Parent=Thaps269030;rank=1 chr6 . exon 482389 483255 . + . ID=Thaps269030.1;Parent=Thaps269030;constitutive=1;rank=1 chr6 . CDS 483340 483677 . + 0 ID=Thaps269030;Parent=Thaps269030;rank=2 chr6 . exon 483340 483677 . + . ID=Thaps269030.2;Parent=Thaps269030;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 483726 484176 . + 0 ID=Thaps269030;Parent=Thaps269030;rank=3 chr6 . exon 483726 484176 . + . ID=Thaps269030.3;Parent=Thaps269030;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 484258 484590 . + 0 ID=Thaps269030;Parent=Thaps269030;rank=4 chr6 . exon 484258 484590 . + . ID=Thaps269030.4;Parent=Thaps269030;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 478183 478668 . - . ID=Thaps28521;biotype=protein_coding;description=Glycine decarboxylase h-protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5A8];external_name=GDCH;logic_name=jgi_thaps3 chr6 ensembl transcript 478183 478668 . - . ID=Thaps28521;Parent=Thaps28521;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 478183 478538 . - 0 ID=Thaps28521;Parent=Thaps28521;rank=2 chr6 . exon 478183 478538 . - . ID=Thaps28521.2;Parent=Thaps28521;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 478647 478668 . - 0 ID=Thaps28521;Parent=Thaps28521;rank=1 chr6 . exon 478647 478668 . - . ID=Thaps28521.1;Parent=Thaps28521;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 480665 482076 . - . ID=Thaps6010;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5A9];external_name=Thaps6010;logic_name=jgi_thaps3 chr6 ensembl transcript 480665 482076 . - . ID=Thaps6010;Parent=Thaps6010;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 480665 481387 . - 0 ID=Thaps6010;Parent=Thaps6010;rank=2 chr6 . exon 480665 481387 . - . ID=Thaps6010.2;Parent=Thaps6010;constitutive=1;rank=2 chr6 . CDS 481477 482076 . - 0 ID=Thaps6010;Parent=Thaps6010;rank=1 chr6 . exon 481477 482076 . - . ID=Thaps6010.1;Parent=Thaps6010;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 484868 488115 . - . ID=Thaps6012;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B1];external_name=Thaps6012;logic_name=jgi_thaps3 chr6 ensembl transcript 484868 488115 . - . ID=Thaps6012;Parent=Thaps6012;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 484868 486712 . - 0 ID=Thaps6012;Parent=Thaps6012;rank=2 chr6 . exon 484868 486712 . - . ID=Thaps6012.2;Parent=Thaps6012;constitutive=1;rank=2 chr6 . CDS 486847 488115 . - 0 ID=Thaps6012;Parent=Thaps6012;rank=1 chr6 . exon 486847 488115 . - . ID=Thaps6012.1;Parent=Thaps6012;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 493479 495386 . - . ID=Thaps12971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B5];external_name=Thaps12971;logic_name=jgi_thaps3 chr6 ensembl transcript 493479 495386 . - . ID=Thaps12971;Parent=Thaps12971;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 493479 494266 . - 0 ID=Thaps12971;Parent=Thaps12971;rank=3 chr6 . exon 493479 494266 . - . ID=Thaps12971.3;Parent=Thaps12971;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 494339 494763 . - 0 ID=Thaps12971;Parent=Thaps12971;rank=2 chr6 . exon 494339 494763 . - . ID=Thaps12971.2;Parent=Thaps12971;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 494806 495386 . - 0 ID=Thaps12971;Parent=Thaps12971;rank=1 chr6 . exon 494806 495386 . - . ID=Thaps12971.1;Parent=Thaps12971;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 488562 489230 . + . ID=Thaps23018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B2];external_name=Thaps23018;logic_name=jgi_thaps3 chr6 ensembl transcript 488562 489230 . + . ID=Thaps23018;Parent=Thaps23018;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 488562 489230 . + 0 ID=Thaps23018;Parent=Thaps23018;rank=1 chr6 . exon 488562 489230 . + . ID=Thaps23018.1;Parent=Thaps23018;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 489826 491091 . - . ID=Thaps28523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B3];external_name=Thaps28523;logic_name=jgi_thaps3 chr6 ensembl transcript 489826 491091 . - . ID=Thaps28523;Parent=Thaps28523;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 489826 490061 . - 0 ID=Thaps28523;Parent=Thaps28523;rank=3 chr6 . exon 489826 490061 . - . ID=Thaps28523.3;Parent=Thaps28523;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 490290 490818 . - 0 ID=Thaps28523;Parent=Thaps28523;rank=2 chr6 . exon 490290 490818 . - . ID=Thaps28523.2;Parent=Thaps28523;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 490894 491091 . - 0 ID=Thaps28523;Parent=Thaps28523;rank=1 chr6 . exon 490894 491091 . - . ID=Thaps28523.1;Parent=Thaps28523;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 491638 492585 . + . ID=Thaps6015;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B4];external_name=Thaps6015;logic_name=jgi_thaps3 chr6 ensembl transcript 491638 492585 . + . ID=Thaps6015;Parent=Thaps6015;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 491638 492585 . + 0 ID=Thaps6015;Parent=Thaps6015;rank=1 chr6 . exon 491638 492585 . + . ID=Thaps6015.1;Parent=Thaps6015;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 495785 497048 . + . ID=Thaps6017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B6];external_name=Thaps6017;logic_name=jgi_thaps3 chr6 ensembl transcript 495785 497048 . + . ID=Thaps6017;Parent=Thaps6017;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 495785 496846 . + 0 ID=Thaps6017;Parent=Thaps6017;rank=1 chr6 . exon 495785 496846 . + . ID=Thaps6017.1;Parent=Thaps6017;constitutive=1;rank=1 chr6 . CDS 496929 497048 . + 0 ID=Thaps6017;Parent=Thaps6017;rank=2 chr6 . exon 496929 497048 . + . ID=Thaps6017.2;Parent=Thaps6017;constitutive=1;rank=2 chr6 . repeat_region 502457 502470 . ? . description=dust chr6 ensembl protein_coding_gene 506297 506822 . - . ID=Thaps23024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5C2];external_name=Thaps23024;logic_name=jgi_thaps3 chr6 ensembl transcript 506297 506822 . - . ID=Thaps23024;Parent=Thaps23024;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 506297 506527 . - 0 ID=Thaps23024;Parent=Thaps23024;rank=2 chr6 . exon 506297 506527 . - . ID=Thaps23024.2;Parent=Thaps23024;constitutive=1;rank=2 chr6 . CDS 506703 506822 . - 0 ID=Thaps23024;Parent=Thaps23024;rank=1 chr6 . exon 506703 506822 . - . ID=Thaps23024.1;Parent=Thaps23024;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 507139 507831 . - . ID=Thaps23025;biotype=protein_coding;description=60S ribosomal protein L10A [Source:UniProtKB/TrEMBL%3BAcc:B8C5C3];external_name=RPL1;logic_name=jgi_thaps3 chr6 ensembl transcript 507139 507831 . - . ID=Thaps23025;Parent=Thaps23025;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 507139 507831 . - 0 ID=Thaps23025;Parent=Thaps23025;rank=1 chr6 . exon 507139 507831 . - . ID=Thaps23025.1;Parent=Thaps23025;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 500799 501091 . - . ID=Thaps262775;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B8];external_name=Thaps262775;logic_name=jgi_thaps3 chr6 ensembl transcript 500799 501091 . - . ID=Thaps262775;Parent=Thaps262775;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 500799 501091 . - 0 ID=Thaps262775;Parent=Thaps262775;rank=1 chr6 . exon 500799 501091 . - . ID=Thaps262775.1;Parent=Thaps262775;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 499806 500458 . + . ID=Thaps269034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B7];external_name=Thaps269034;logic_name=jgi_thaps3 chr6 ensembl transcript 499806 500458 . + . ID=Thaps269034;Parent=Thaps269034;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 499806 499939 . + 0 ID=Thaps269034;Parent=Thaps269034;rank=1 chr6 . exon 499806 499939 . + . ID=Thaps269034.1;Parent=Thaps269034;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 500014 500458 . + 0 ID=Thaps269034;Parent=Thaps269034;rank=2 chr6 . exon 500014 500458 . + . ID=Thaps269034.2;Parent=Thaps269034;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 505232 505789 . + . ID=Thaps35200;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5C1];external_name=Thaps35200;logic_name=jgi_thaps3 chr6 ensembl transcript 505232 505789 . + . ID=Thaps35200;Parent=Thaps35200;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 505232 505307 . + 0 ID=Thaps35200;Parent=Thaps35200;rank=1 chr6 . exon 505232 505307 . + . ID=Thaps35200.1;Parent=Thaps35200;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 505545 505789 . + 0 ID=Thaps35200;Parent=Thaps35200;rank=2 chr6 . exon 505545 505789 . + . ID=Thaps35200.2;Parent=Thaps35200;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 503462 504657 . - . ID=Thaps511;biotype=protein_coding;description=GTP binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5C0];external_name=GBP1;logic_name=jgi_thaps3 chr6 ensembl transcript 503462 504657 . - . ID=Thaps511;Parent=Thaps511;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 503462 504438 . - 0 ID=Thaps511;Parent=Thaps511;rank=2 chr6 . exon 503462 504438 . - . ID=Thaps511.2;Parent=Thaps511;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 504543 504657 . - 0 ID=Thaps511;Parent=Thaps511;rank=1 chr6 . exon 504543 504657 . - . ID=Thaps511.1;Parent=Thaps511;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 501702 503345 . + . ID=Thaps6020;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5B9];external_name=Thaps6020;logic_name=jgi_thaps3 chr6 ensembl transcript 501702 503345 . + . ID=Thaps6020;Parent=Thaps6020;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 501702 502398 . + 0 ID=Thaps6020;Parent=Thaps6020;rank=1 chr6 . exon 501702 502398 . + . ID=Thaps6020.1;Parent=Thaps6020;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 502480 503345 . + 0 ID=Thaps6020;Parent=Thaps6020;rank=2 chr6 . exon 502480 503345 . + . ID=Thaps6020.2;Parent=Thaps6020;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 513349 517358 . + . ID=Thaps23027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5C5];external_name=Thaps23027;logic_name=jgi_thaps3 chr6 ensembl transcript 513349 517358 . + . ID=Thaps23027;Parent=Thaps23027;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 513349 513402 . + 0 ID=Thaps23027;Parent=Thaps23027;rank=1 chr6 . exon 513349 513402 . + . ID=Thaps23027.1;Parent=Thaps23027;constitutive=1;rank=1 chr6 . CDS 513688 515720 . + 0 ID=Thaps23027;Parent=Thaps23027;rank=2 chr6 . exon 513688 515720 . + . ID=Thaps23027.2;Parent=Thaps23027;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 515799 516551 . + 0 ID=Thaps23027;Parent=Thaps23027;rank=3 chr6 . exon 515799 516551 . + . ID=Thaps23027.3;Parent=Thaps23027;constitutive=1;rank=3 chr6 . CDS 516630 516861 . + 0 ID=Thaps23027;Parent=Thaps23027;rank=4 chr6 . exon 516630 516861 . + . ID=Thaps23027.4;Parent=Thaps23027;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 516945 517358 . + 0 ID=Thaps23027;Parent=Thaps23027;rank=5 chr6 . exon 516945 517358 . + . ID=Thaps23027.5;Parent=Thaps23027;constitutive=1;rank=5 chr6 ensembl protein_coding_gene 517478 519448 . - . ID=Thaps23028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5C6];external_name=Thaps23028;logic_name=jgi_thaps3 chr6 ensembl transcript 517478 519448 . - . ID=Thaps23028;Parent=Thaps23028;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 517478 517960 . - 0 ID=Thaps23028;Parent=Thaps23028;rank=2 chr6 . exon 517478 517960 . - . ID=Thaps23028.2;Parent=Thaps23028;constitutive=1;rank=2 chr6 . CDS 518057 519448 . - 0 ID=Thaps23028;Parent=Thaps23028;rank=1 chr6 ensembl protein_coding_gene 509361 512194 . + . ID=Thaps35103;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5C4];external_name=Thaps35103;logic_name=jgi_thaps3 chr6 ensembl transcript 509361 512194 . + . ID=Thaps35103;Parent=Thaps35103;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 509361 509411 . + 0 ID=Thaps35103;Parent=Thaps35103;rank=1 chr6 . exon 509361 509411 . + . ID=Thaps35103.1;Parent=Thaps35103;constitutive=1;rank=1 chr6 . CDS 509572 510786 . + 0 ID=Thaps35103;Parent=Thaps35103;rank=2 chr6 . exon 509572 510786 . + . ID=Thaps35103.2;Parent=Thaps35103;constitutive=1;rank=2 chr6 . CDS 510988 511325 . + 0 ID=Thaps35103;Parent=Thaps35103;rank=3 chr6 . exon 510988 511325 . + . ID=Thaps35103.3;Parent=Thaps35103;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 511401 511452 . + 0 ID=Thaps35103;Parent=Thaps35103;rank=4 chr6 . exon 511401 511452 . + . ID=Thaps35103.4;Parent=Thaps35103;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 511562 511696 . + 0 ID=Thaps35103;Parent=Thaps35103;rank=5 chr6 . exon 511562 511696 . + . ID=Thaps35103.5;Parent=Thaps35103;constitutive=1;rank=5 chr6 . CDS 511838 512194 . + 0 ID=Thaps35103;Parent=Thaps35103;rank=6 chr6 . exon 511838 512194 . + . ID=Thaps35103.6;Parent=Thaps35103;constitutive=1;rank=6 chr6 . repeat_region 519706 519779 . ? . description=trf chr6 . repeat_region 519825 519921 . - . description=Copia8I_TP chr6 . repeat_region 519922 519973 . ? . description=trf chr6 . repeat_region 520149 520222 . ? . description=trf chr6 . repeat_region 522946 522953 . ? . description=dust chr6 . exon 518057 519448 . - . ID=Thaps23028.1;Parent=Thaps23028;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 525386 527513 . - . ID=Thaps23029;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5C9];external_name=Thaps23029;logic_name=jgi_thaps3 chr6 ensembl transcript 525386 527513 . - . ID=Thaps23029;Parent=Thaps23029;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 525386 526220 . - 0 ID=Thaps23029;Parent=Thaps23029;rank=2 chr6 . exon 525386 526220 . - . ID=Thaps23029.2;Parent=Thaps23029;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 526297 527513 . - 0 ID=Thaps23029;Parent=Thaps23029;rank=1 chr6 . exon 526297 527513 . - . ID=Thaps23029.1;Parent=Thaps23029;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 521299 522804 . - . ID=Thaps6028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5C7];external_name=NTT8;logic_name=jgi_thaps3 chr6 ensembl transcript 521299 522804 . - . ID=Thaps6028;Parent=Thaps6028;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 521299 522804 . - 0 ID=Thaps6028;Parent=Thaps6028;rank=1 chr6 . exon 521299 522804 . - . ID=Thaps6028.1;Parent=Thaps6028;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 523286 525280 . + . ID=Thaps6029;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5C8];external_name=Thaps6029;logic_name=jgi_thaps3 chr6 ensembl transcript 523286 525280 . + . ID=Thaps6029;Parent=Thaps6029;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 523286 525280 . + 0 ID=Thaps6029;Parent=Thaps6029;rank=1 chr6 . exon 523286 525280 . + . ID=Thaps6029.1;Parent=Thaps6029;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 530925 537482 . + . ID=Thaps23031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D2];external_name=Thaps23031;logic_name=jgi_thaps3 chr6 ensembl transcript 530925 537482 . + . ID=Thaps23031;Parent=Thaps23031;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 530925 537482 . + 0 ID=Thaps23031;Parent=Thaps23031;rank=1 chr6 . exon 530925 537482 . + . ID=Thaps23031.1;Parent=Thaps23031;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 528400 529381 . + . ID=Thaps6031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D0];external_name=Thaps6031;logic_name=jgi_thaps3 chr6 ensembl transcript 528400 529381 . + . ID=Thaps6031;Parent=Thaps6031;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 528400 528658 . + 0 ID=Thaps6031;Parent=Thaps6031;rank=1 chr6 . exon 528400 528658 . + . ID=Thaps6031.1;Parent=Thaps6031;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 528826 529334 . + 0 ID=Thaps6031;Parent=Thaps6031;rank=2 chr6 . exon 528826 529334 . + . ID=Thaps6031.2;Parent=Thaps6031;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 529367 529381 . + 0 ID=Thaps6031;Parent=Thaps6031;rank=3 chr6 . exon 529367 529381 . + . ID=Thaps6031.3;Parent=Thaps6031;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 529590 530595 . - . ID=Thaps6032;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D1];external_name=Thaps6032;logic_name=jgi_thaps3 chr6 ensembl transcript 529590 530595 . - . ID=Thaps6032;Parent=Thaps6032;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 529590 530158 . - 0 ID=Thaps6032;Parent=Thaps6032;rank=3 chr6 . exon 529590 530158 . - . ID=Thaps6032.3;Parent=Thaps6032;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 530253 530384 . - 0 ID=Thaps6032;Parent=Thaps6032;rank=2 chr6 . exon 530253 530384 . - . ID=Thaps6032.2;Parent=Thaps6032;constitutive=1;rank=2 chr6 . CDS 530463 530595 . - 0 ID=Thaps6032;Parent=Thaps6032;rank=1 chr6 . exon 530463 530595 . - . ID=Thaps6032.1;Parent=Thaps6032;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 543673 544434 . - . ID=Thaps17242;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D5];external_name=Thaps17242;logic_name=jgi_thaps3 chr6 ensembl transcript 543673 544434 . - . ID=Thaps17242;Parent=Thaps17242;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 543673 544434 . - 0 ID=Thaps17242;Parent=Thaps17242;rank=1 chr6 . exon 543673 544434 . - . ID=Thaps17242.1;Parent=Thaps17242;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 542749 543084 . + . ID=Thaps19662;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D4];external_name=Thaps19662;logic_name=jgi_thaps3 chr6 ensembl transcript 542749 543084 . + . ID=Thaps19662;Parent=Thaps19662;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 542749 543084 . + 0 ID=Thaps19662;Parent=Thaps19662;rank=1 chr6 . exon 542749 543084 . + . ID=Thaps19662.1;Parent=Thaps19662;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 539291 542167 . - . ID=Thaps23033;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D3];external_name=Thaps23033;logic_name=jgi_thaps3 chr6 ensembl transcript 539291 542167 . - . ID=Thaps23033;Parent=Thaps23033;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 539291 542167 . - 0 ID=Thaps23033;Parent=Thaps23033;rank=1 chr6 . exon 539291 542167 . - . ID=Thaps23033.1;Parent=Thaps23033;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 544973 546715 . + . ID=Thaps23034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D6];external_name=Thaps23034;logic_name=jgi_thaps3 chr6 ensembl transcript 544973 546715 . + . ID=Thaps23034;Parent=Thaps23034;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 544973 546715 . + 0 ID=Thaps23034;Parent=Thaps23034;rank=1 chr6 . exon 544973 546715 . + . ID=Thaps23034.1;Parent=Thaps23034;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 547278 547442 . - . ID=Thaps262785;biotype=protein_coding;description=SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C atpase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D7];external_name=Thaps262785;logic_name=jgi_thaps3 chr6 ensembl transcript 547278 547442 . - . ID=Thaps262785;Parent=Thaps262785;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 547278 547442 . - 0 ID=Thaps262785;Parent=Thaps262785;rank=1 chr6 . exon 547278 547442 . - . ID=Thaps262785.1;Parent=Thaps262785;constitutive=1;rank=1 chr6 . repeat_region 550883 550925 . ? . description=trf chr6 . repeat_region 553741 553766 . ? . description=dust chr6 ensembl protein_coding_gene 550604 553879 . - . ID=Thaps23036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D9];external_name=Thaps23036;logic_name=jgi_thaps3 chr6 ensembl transcript 550604 553879 . - . ID=Thaps23036;Parent=Thaps23036;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 550604 553879 . - 0 ID=Thaps23036;Parent=Thaps23036;rank=1 chr6 . exon 550604 553879 . - . ID=Thaps23036.1;Parent=Thaps23036;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 554953 555855 . - . ID=Thaps28544;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5E0];external_name=Thaps28544;logic_name=jgi_thaps3 chr6 ensembl transcript 554953 555855 . - . ID=Thaps28544;Parent=Thaps28544;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 554953 555855 . - 0 ID=Thaps28544;Parent=Thaps28544;rank=1 chr6 . exon 554953 555855 . - . ID=Thaps28544.1;Parent=Thaps28544;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 547929 549139 . - . ID=Thaps34710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5D8];external_name=Thaps34710;logic_name=jgi_thaps3 chr6 ensembl transcript 547929 549139 . - . ID=Thaps34710;Parent=Thaps34710;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 547929 548132 . - 0 ID=Thaps34710;Parent=Thaps34710;rank=3 chr6 . exon 547929 548132 . - . ID=Thaps34710.3;Parent=Thaps34710;constitutive=1;rank=3 chr6 . CDS 548213 548716 . - 0 ID=Thaps34710;Parent=Thaps34710;rank=2 chr6 . exon 548213 548716 . - . ID=Thaps34710.2;Parent=Thaps34710;constitutive=1;rank=2 chr6 . CDS 548792 549139 . - 0 ID=Thaps34710;Parent=Thaps34710;rank=1 chr6 . exon 548792 549139 . - . ID=Thaps34710.1;Parent=Thaps34710;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 556291 557287 . + . ID=Thaps40958;biotype=protein_coding;description=Triosephosphate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8C5E1];external_name=TPI1;logic_name=jgi_thaps3 chr6 ensembl transcript 556291 557287 . + . ID=Thaps40958;Parent=Thaps40958;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 556291 557018 . + 0 ID=Thaps40958;Parent=Thaps40958;rank=1 chr6 . exon 556291 557018 . + . ID=Thaps40958.1;Parent=Thaps40958;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 557170 557287 . + 0 ID=Thaps40958;Parent=Thaps40958;rank=2 chr6 . exon 557170 557287 . + . ID=Thaps40958.2;Parent=Thaps40958;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 558045 559263 . - . ID=Thaps15267;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5E2];external_name=Thaps15267;logic_name=jgi_thaps3 chr6 ensembl transcript 558045 559263 . - . ID=Thaps15267;Parent=Thaps15267;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 558045 559105 . - 0 ID=Thaps15267;Parent=Thaps15267;rank=2 chr6 . exon 558045 559105 . - . ID=Thaps15267.2;Parent=Thaps15267;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 559206 559263 . - 0 ID=Thaps15267;Parent=Thaps15267;rank=1 chr6 . exon 559206 559263 . - . ID=Thaps15267.1;Parent=Thaps15267;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 561585 563376 . - . ID=Thaps23039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5E4];external_name=Thaps23039;logic_name=jgi_thaps3 chr6 ensembl transcript 561585 563376 . - . ID=Thaps23039;Parent=Thaps23039;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 561585 562447 . - 0 ID=Thaps23039;Parent=Thaps23039;rank=2 chr6 . exon 561585 562447 . - . ID=Thaps23039.2;Parent=Thaps23039;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 562524 563376 . - 0 ID=Thaps23039;Parent=Thaps23039;rank=1 chr6 . exon 562524 563376 . - . ID=Thaps23039.1;Parent=Thaps23039;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 566834 575764 . + . ID=Thaps23040;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5E6];external_name=Thaps23040;logic_name=jgi_thaps3 chr6 ensembl transcript 566834 575764 . + . ID=Thaps23040;Parent=Thaps23040;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 566834 568210 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=1 chr6 . exon 566834 568210 . + . ID=Thaps23040.1;Parent=Thaps23040;constitutive=1;rank=1 chr6 . CDS 568292 568327 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=2 chr6 . CDS 568370 568672 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=3 chr6 . CDS 568767 569640 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=4 chr6 . CDS 569720 570446 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=5 chr6 . CDS 570525 571311 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=6 chr6 . CDS 571390 572310 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=7 chr6 . CDS 572389 572974 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=8 chr6 . CDS 573055 573204 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=9 chr6 . CDS 573297 573912 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=10 chr6 . CDS 574007 574072 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=11 chr6 . CDS 574148 574606 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=12 chr6 . CDS 574688 575253 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=13 chr6 . CDS 575334 575764 . + 0 ID=Thaps23040;Parent=Thaps23040;rank=14 chr6 ensembl protein_coding_gene 559894 561420 . + . ID=Thaps6043;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5E3];external_name=Thaps6043;logic_name=jgi_thaps3 chr6 ensembl transcript 559894 561420 . + . ID=Thaps6043;Parent=Thaps6043;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 559894 560274 . + 0 ID=Thaps6043;Parent=Thaps6043;rank=1 chr6 . exon 559894 560274 . + . ID=Thaps6043.1;Parent=Thaps6043;constitutive=1;rank=1 chr6 . CDS 560383 561420 . + 0 ID=Thaps6043;Parent=Thaps6043;rank=2 chr6 . exon 560383 561420 . + . ID=Thaps6043.2;Parent=Thaps6043;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 563976 566387 . + . ID=Thaps6045;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5E5];external_name=Thaps6045;logic_name=jgi_thaps3 chr6 ensembl transcript 563976 566387 . + . ID=Thaps6045;Parent=Thaps6045;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 563976 566387 . + 0 ID=Thaps6045;Parent=Thaps6045;rank=1 chr6 . exon 563976 566387 . + . ID=Thaps6045.1;Parent=Thaps6045;constitutive=1;rank=1 chr6 . exon 568292 568327 . + . ID=Thaps23040.2;Parent=Thaps23040;constitutive=1;rank=2 chr6 . exon 568370 568672 . + . ID=Thaps23040.3;Parent=Thaps23040;constitutive=1;rank=3 chr6 . exon 568767 569640 . + . ID=Thaps23040.4;Parent=Thaps23040;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . exon 569720 570446 . + . ID=Thaps23040.5;Parent=Thaps23040;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . exon 570525 571311 . + . ID=Thaps23040.6;Parent=Thaps23040;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . exon 571390 572310 . + . ID=Thaps23040.7;Parent=Thaps23040;constitutive=1;rank=7 chr6 . exon 572389 572974 . + . ID=Thaps23040.8;Parent=Thaps23040;constitutive=1;ensembl_end_phase=1;rank=8 chr6 . exon 573055 573204 . + . ID=Thaps23040.9;Parent=Thaps23040;constitutive=1;rank=9 chr6 . exon 573297 573912 . + . ID=Thaps23040.10;Parent=Thaps23040;constitutive=1;ensembl_end_phase=1;rank=10 chr6 . exon 574007 574072 . + . ID=Thaps23040.11;Parent=Thaps23040;constitutive=1;rank=11 chr6 . exon 574148 574606 . + . ID=Thaps23040.12;Parent=Thaps23040;constitutive=1;rank=12 chr6 . exon 574688 575253 . + . ID=Thaps23040.13;Parent=Thaps23040;constitutive=1;ensembl_end_phase=2;rank=13 chr6 . exon 575334 575764 . + . ID=Thaps23040.14;Parent=Thaps23040;constitutive=1;ensembl_end_phase=2;rank=14 chr6 ensembl protein_coding_gene 575821 577985 . - . ID=Thaps6047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5E7];external_name=Thaps6047;logic_name=jgi_thaps3 chr6 ensembl transcript 575821 577985 . - . ID=Thaps6047;Parent=Thaps6047;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 575821 576518 . - 0 ID=Thaps6047;Parent=Thaps6047;rank=5 chr6 . exon 575821 576518 . - . ID=Thaps6047.5;Parent=Thaps6047;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 576549 576616 . - 0 ID=Thaps6047;Parent=Thaps6047;rank=4 chr6 . exon 576549 576616 . - . ID=Thaps6047.4;Parent=Thaps6047;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 576705 577289 . - 0 ID=Thaps6047;Parent=Thaps6047;rank=3 chr6 . exon 576705 577289 . - . ID=Thaps6047.3;Parent=Thaps6047;constitutive=1;rank=3 chr6 . CDS 577359 577784 . - 0 ID=Thaps6047;Parent=Thaps6047;rank=2 chr6 . exon 577359 577784 . - . ID=Thaps6047.2;Parent=Thaps6047;constitutive=1;rank=2 chr6 . CDS 577909 577985 . - 0 ID=Thaps6047;Parent=Thaps6047;rank=1 chr6 . repeat_region 585290 585309 . ? . description=trf chr6 . repeat_region 585290 585309 . ? . description=dust chr6 . repeat_region 586396 586450 . ? . description=trf chr6 . repeat_region 586667 586693 . ? . description=trf chr6 . repeat_region 587030 587049 . ? . description=trf chr6 ensembl protein_coding_gene 584064 586265 . - . ID=Thaps23043;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F1];external_name=Thaps23043;logic_name=jgi_thaps3 chr6 ensembl transcript 584064 586265 . - . ID=Thaps23043;Parent=Thaps23043;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 584064 586265 . - 0 ID=Thaps23043;Parent=Thaps23043;rank=1 chr6 . exon 584064 586265 . - . ID=Thaps23043.1;Parent=Thaps23043;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 580450 581508 . - . ID=Thaps40962;biotype=protein_coding;description=26S proteasome regulatory subunit 8 [Source:UniProtKB/TrEMBL%3BAcc:B8C5E9];external_name=RPN8;logic_name=jgi_thaps3 chr6 ensembl transcript 580450 581508 . - . ID=Thaps40962;Parent=Thaps40962;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 580450 581508 . - 0 ID=Thaps40962;Parent=Thaps40962;rank=1 chr6 . exon 580450 581508 . - . ID=Thaps40962.1;Parent=Thaps40962;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 582805 583935 . + . ID=Thaps40966;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F0];external_name=Thaps40966;logic_name=jgi_thaps3 chr6 ensembl transcript 582805 583935 . + . ID=Thaps40966;Parent=Thaps40966;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 582805 583176 . + 0 ID=Thaps40966;Parent=Thaps40966;rank=1 chr6 . exon 582805 583176 . + . ID=Thaps40966.1;Parent=Thaps40966;constitutive=1;rank=1 chr6 . CDS 583270 583935 . + 0 ID=Thaps40966;Parent=Thaps40966;rank=2 chr6 . exon 583270 583935 . + . ID=Thaps40966.2;Parent=Thaps40966;constitutive=1;rank=2 chr6 . exon 577909 577985 . - . ID=Thaps6047.1;Parent=Thaps6047;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 578959 580294 . + . ID=Thaps6048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5E8];external_name=Thaps6048;logic_name=jgi_thaps3 chr6 ensembl transcript 578959 580294 . + . ID=Thaps6048;Parent=Thaps6048;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 578959 579307 . + 0 ID=Thaps6048;Parent=Thaps6048;rank=1 chr6 . exon 578959 579307 . + . ID=Thaps6048.1;Parent=Thaps6048;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 579362 580000 . + 0 ID=Thaps6048;Parent=Thaps6048;rank=2 chr6 . exon 579362 580000 . + . ID=Thaps6048.2;Parent=Thaps6048;constitutive=1;rank=2 chr6 . CDS 580083 580294 . + 0 ID=Thaps6048;Parent=Thaps6048;rank=3 chr6 . exon 580083 580294 . + . ID=Thaps6048.3;Parent=Thaps6048;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 587015 588842 . + . ID=Thaps6052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F2];external_name=Thaps6052;logic_name=jgi_thaps3 chr6 ensembl transcript 587015 588842 . + . ID=Thaps6052;Parent=Thaps6052;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 587015 588099 . + 0 ID=Thaps6052;Parent=Thaps6052;rank=1 chr6 . exon 587015 588099 . + . ID=Thaps6052.1;Parent=Thaps6052;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 588419 588842 . + 0 ID=Thaps6052;Parent=Thaps6052;rank=2 chr6 ensembl protein_coding_gene 588958 591744 . - . ID=Thaps23044;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F3];external_name=Thaps23044;logic_name=jgi_thaps3 chr6 ensembl transcript 588958 591744 . - . ID=Thaps23044;Parent=Thaps23044;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 588958 590879 . - 0 ID=Thaps23044;Parent=Thaps23044;rank=2 chr6 . exon 588958 590879 . - . ID=Thaps23044.2;Parent=Thaps23044;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 590976 591744 . - 0 ID=Thaps23044;Parent=Thaps23044;rank=1 chr6 . exon 590976 591744 . - . ID=Thaps23044.1;Parent=Thaps23044;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 596386 596901 . - . ID=Thaps34992;biotype=protein_coding;description=Adenylyl cyclase-associated protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F5];external_name=Thaps34992;logic_name=jgi_thaps3 chr6 ensembl transcript 596386 596901 . - . ID=Thaps34992;Parent=Thaps34992;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 596386 596901 . - 0 ID=Thaps34992;Parent=Thaps34992;rank=1 chr6 . exon 596386 596901 . - . ID=Thaps34992.1;Parent=Thaps34992;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 592157 592811 . - . ID=Thaps34994;biotype=protein_coding;description=Prefoldin protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F4];external_name=VHL1;logic_name=jgi_thaps3 chr6 ensembl transcript 592157 592811 . - . ID=Thaps34994;Parent=Thaps34994;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 592157 592273 . - 0 ID=Thaps34994;Parent=Thaps34994;rank=2 chr6 . exon 592157 592273 . - . ID=Thaps34994.2;Parent=Thaps34994;constitutive=1;rank=2 chr6 . CDS 592392 592811 . - 0 ID=Thaps34994;Parent=Thaps34994;rank=1 chr6 . exon 592392 592811 . - . ID=Thaps34994.1;Parent=Thaps34994;constitutive=1;rank=1 chr6 . exon 588419 588842 . + . ID=Thaps6052.2;Parent=Thaps6052;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 597353 598975 . + . ID=Thaps6056;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F6];external_name=Thaps6056;logic_name=jgi_thaps3 chr6 ensembl transcript 597353 598975 . + . ID=Thaps6056;Parent=Thaps6056;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 597353 598252 . + 0 ID=Thaps6056;Parent=Thaps6056;rank=1 chr6 . exon 597353 598252 . + . ID=Thaps6056.1;Parent=Thaps6056;constitutive=1;rank=1 chr6 . CDS 598343 598537 . + 0 ID=Thaps6056;Parent=Thaps6056;rank=2 chr6 . CDS 598625 598975 . + 0 ID=Thaps6056;Parent=Thaps6056;rank=3 chr6 ensembl protein_coding_gene 599050 600699 . - . ID=Thaps23047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F7];external_name=Thaps23047;logic_name=jgi_thaps3 chr6 ensembl transcript 599050 600699 . - . ID=Thaps23047;Parent=Thaps23047;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 599050 599824 . - 0 ID=Thaps23047;Parent=Thaps23047;rank=5 chr6 . exon 599050 599824 . - . ID=Thaps23047.5;Parent=Thaps23047;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 599903 600211 . - 0 ID=Thaps23047;Parent=Thaps23047;rank=4 chr6 . exon 599903 600211 . - . ID=Thaps23047.4;Parent=Thaps23047;constitutive=1;rank=4 chr6 . CDS 600310 600411 . - 0 ID=Thaps23047;Parent=Thaps23047;rank=3 chr6 . exon 600310 600411 . - . ID=Thaps23047.3;Parent=Thaps23047;constitutive=1;rank=3 chr6 . CDS 600527 600548 . - 0 ID=Thaps23047;Parent=Thaps23047;rank=2 chr6 . exon 600527 600548 . - . ID=Thaps23047.2;Parent=Thaps23047;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 600630 600699 . - 0 ID=Thaps23047;Parent=Thaps23047;rank=1 chr6 . exon 600630 600699 . - . ID=Thaps23047.1;Parent=Thaps23047;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 600988 602277 . + . ID=Thaps23048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F8];external_name=Thaps23048;logic_name=jgi_thaps3 chr6 ensembl transcript 600988 602277 . + . ID=Thaps23048;Parent=Thaps23048;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 600988 602136 . + 0 ID=Thaps23048;Parent=Thaps23048;rank=1 chr6 . exon 600988 602136 . + . ID=Thaps23048.1;Parent=Thaps23048;constitutive=1;rank=1 chr6 . CDS 602272 602277 . + 0 ID=Thaps23048;Parent=Thaps23048;rank=2 chr6 . exon 602272 602277 . + . ID=Thaps23048.2;Parent=Thaps23048;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 606822 607665 . - . ID=Thaps23050;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5G1];external_name=Thaps23050;logic_name=jgi_thaps3 chr6 ensembl transcript 606822 607665 . - . ID=Thaps23050;Parent=Thaps23050;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 606822 607456 . - 0 ID=Thaps23050;Parent=Thaps23050;rank=2 chr6 . exon 606822 607456 . - . ID=Thaps23050.2;Parent=Thaps23050;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 607587 607665 . - 0 ID=Thaps23050;Parent=Thaps23050;rank=1 chr6 ensembl protein_coding_gene 604212 605564 . + . ID=Thaps262792;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5F9];external_name=Thaps262792;logic_name=jgi_thaps3 chr6 ensembl transcript 604212 605564 . + . ID=Thaps262792;Parent=Thaps262792;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 604212 604521 . + 0 ID=Thaps262792;Parent=Thaps262792;rank=1 chr6 . exon 604212 604521 . + . ID=Thaps262792.1;Parent=Thaps262792;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 604629 604872 . + 0 ID=Thaps262792;Parent=Thaps262792;rank=2 chr6 . exon 604629 604872 . + . ID=Thaps262792.2;Parent=Thaps262792;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 605053 605139 . + 0 ID=Thaps262792;Parent=Thaps262792;rank=3 chr6 . exon 605053 605139 . + . ID=Thaps262792.3;Parent=Thaps262792;constitutive=1;rank=3 chr6 . CDS 605222 605564 . + 0 ID=Thaps262792;Parent=Thaps262792;rank=4 chr6 . exon 605222 605564 . + . ID=Thaps262792.4;Parent=Thaps262792;constitutive=1;ensembl_end_phase=1;rank=4 chr6 ensembl protein_coding_gene 605848 606693 . + . ID=Thaps269049;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5G0];external_name=Thaps269049;logic_name=jgi_thaps3 chr6 ensembl transcript 605848 606693 . + . ID=Thaps269049;Parent=Thaps269049;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 605848 606693 . + 0 ID=Thaps269049;Parent=Thaps269049;rank=1 chr6 . exon 605848 606693 . + . ID=Thaps269049.1;Parent=Thaps269049;constitutive=1;rank=1 chr6 . exon 598343 598537 . + . ID=Thaps6056.2;Parent=Thaps6056;constitutive=1;rank=2 chr6 . exon 598625 598975 . + . ID=Thaps6056.3;Parent=Thaps6056;constitutive=1;rank=3 chr6 . exon 607587 607665 . - . ID=Thaps23050.1;Parent=Thaps23050;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 608034 612263 . + . ID=Thaps23051;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5G2];external_name=Thaps23051;logic_name=jgi_thaps3 chr6 ensembl transcript 608034 612263 . + . ID=Thaps23051;Parent=Thaps23051;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 608034 612263 . + 0 ID=Thaps23051;Parent=Thaps23051;rank=1 chr6 . exon 608034 612263 . + . ID=Thaps23051.1;Parent=Thaps23051;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 616197 618152 . - . ID=Thaps23052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5G5];external_name=Thaps23052;logic_name=jgi_thaps3 chr6 ensembl transcript 616197 618152 . - . ID=Thaps23052;Parent=Thaps23052;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 616197 616445 . - 0 ID=Thaps23052;Parent=Thaps23052;rank=2 chr6 . exon 616197 616445 . - . ID=Thaps23052.2;Parent=Thaps23052;constitutive=1;rank=2 chr6 . CDS 616524 618152 . - 0 ID=Thaps23052;Parent=Thaps23052;rank=1 chr6 . exon 616524 618152 . - . ID=Thaps23052.1;Parent=Thaps23052;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 613771 616034 . + . ID=Thaps262795;biotype=protein_coding;description=Nuclease%2C Fen1 like%2C Rad27 family [Source:UniProtKB/TrEMBL%3BAcc:B8C5G4];external_name=Thaps262795;logic_name=jgi_thaps3 chr6 ensembl transcript 613771 616034 . + . ID=Thaps262795;Parent=Thaps262795;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 613771 616034 . + 0 ID=Thaps262795;Parent=Thaps262795;rank=1 chr6 . exon 613771 616034 . + . ID=Thaps262795.1;Parent=Thaps262795;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 612597 613376 . - . ID=Thaps6062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5G3];external_name=Thaps6062;logic_name=jgi_thaps3 chr6 ensembl transcript 612597 613376 . - . ID=Thaps6062;Parent=Thaps6062;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 612597 613376 . - 0 ID=Thaps6062;Parent=Thaps6062;rank=1 chr6 . exon 612597 613376 . - . ID=Thaps6062.1;Parent=Thaps6062;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 618943 619174 . + . ID=Thaps262796;biotype=protein_coding;description=Acyl carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5G6];external_name=ACP3;logic_name=jgi_thaps3 chr6 ensembl transcript 618943 619174 . + . ID=Thaps262796;Parent=Thaps262796;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 618943 619174 . + 0 ID=Thaps262796;Parent=Thaps262796;rank=1 chr6 . exon 618943 619174 . + . ID=Thaps262796.1;Parent=Thaps262796;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl gene 626255 628611 . + . ID=Thaps262797;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr6 ensembl transcript 626255 628611 . + . ID=Thaps262797;Parent=Thaps262797;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr6 . exon 626255 626501 . + . ID=Thaps262797.1;Parent=Thaps262797;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . exon 626532 626565 . + . ID=Thaps262797.2;Parent=Thaps262797;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . exon 626640 626742 . + . ID=Thaps262797.3;Parent=Thaps262797;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . exon 626776 626856 . + . ID=Thaps262797.4;Parent=Thaps262797;constitutive=1;rank=4 chr6 . exon 626930 627009 . + . ID=Thaps262797.5;Parent=Thaps262797;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . exon 627093 627322 . + . ID=Thaps262797.6;Parent=Thaps262797;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . exon 627362 627691 . + . ID=Thaps262797.7;Parent=Thaps262797;constitutive=1;rank=7 chr6 ensembl protein_coding_gene 621875 623337 . - . ID=Thaps6066;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5G7];external_name=Thaps6066;logic_name=jgi_thaps3 chr6 ensembl transcript 621875 623337 . - . ID=Thaps6066;Parent=Thaps6066;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 621875 621907 . - 0 ID=Thaps6066;Parent=Thaps6066;rank=4 chr6 . exon 621875 621907 . - . ID=Thaps6066.4;Parent=Thaps6066;constitutive=1;rank=4 chr6 . CDS 621936 622612 . - 0 ID=Thaps6066;Parent=Thaps6066;rank=3 chr6 . exon 621936 622612 . - . ID=Thaps6066.3;Parent=Thaps6066;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 622726 622883 . - 0 ID=Thaps6066;Parent=Thaps6066;rank=2 chr6 . exon 622726 622883 . - . ID=Thaps6066.2;Parent=Thaps6066;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 622982 623337 . - 0 ID=Thaps6066;Parent=Thaps6066;rank=1 chr6 . exon 622982 623337 . - . ID=Thaps6066.1;Parent=Thaps6066;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 630138 630145 . ? . description=dust chr6 . repeat_region 631029 631453 . + . description=RTE1_TP chr6 . repeat_region 631453 631970 . + . description=RTE1_TP chr6 . repeat_region 634235 634275 . ? . description=dust chr6 ensembl protein_coding_gene 637348 639208 . - . ID=Thaps13653;biotype=protein_coding;description=T-complex protein 1 ETA subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C5G9];external_name=Thaps13653;logic_name=jgi_thaps3 chr6 ensembl transcript 637348 639208 . - . ID=Thaps13653;Parent=Thaps13653;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 637348 638685 . - 0 ID=Thaps13653;Parent=Thaps13653;rank=3 chr6 . exon 637348 638685 . - . ID=Thaps13653.3;Parent=Thaps13653;constitutive=1;rank=3 chr6 . CDS 638789 638992 . - 0 ID=Thaps13653;Parent=Thaps13653;rank=2 chr6 . CDS 639161 639208 . - 0 ID=Thaps13653;Parent=Thaps13653;rank=1 chr6 . exon 627902 628029 . + . ID=Thaps262797.8;Parent=Thaps262797;constitutive=1;ensembl_end_phase=2;rank=8 chr6 . exon 628060 628282 . + . ID=Thaps262797.9;Parent=Thaps262797;constitutive=1;ensembl_end_phase=1;rank=9 chr6 . exon 628331 628411 . + . ID=Thaps262797.10;Parent=Thaps262797;constitutive=1;rank=10 chr6 . exon 628466 628611 . + . ID=Thaps262797.11;Parent=Thaps262797;constitutive=1;ensembl_end_phase=2;rank=11 chr6 ensembl protein_coding_gene 632796 636944 . + . ID=Thaps6068;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5G8];external_name=Thaps6068;logic_name=jgi_thaps3 chr6 ensembl transcript 632796 636944 . + . ID=Thaps6068;Parent=Thaps6068;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 632796 633099 . + 0 ID=Thaps6068;Parent=Thaps6068;rank=1 chr6 . exon 632796 633099 . + . ID=Thaps6068.1;Parent=Thaps6068;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 633197 633398 . + 0 ID=Thaps6068;Parent=Thaps6068;rank=2 chr6 . exon 633197 633398 . + . ID=Thaps6068.2;Parent=Thaps6068;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 633493 636399 . + 0 ID=Thaps6068;Parent=Thaps6068;rank=3 chr6 . exon 633493 636399 . + . ID=Thaps6068.3;Parent=Thaps6068;constitutive=1;rank=3 chr6 . CDS 636434 636944 . + 0 ID=Thaps6068;Parent=Thaps6068;rank=4 chr6 . exon 636434 636944 . + . ID=Thaps6068.4;Parent=Thaps6068;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . exon 638789 638992 . - . ID=Thaps13653.2;Parent=Thaps13653;constitutive=1;rank=2 chr6 . exon 639161 639208 . - . ID=Thaps13653.1;Parent=Thaps13653;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 643342 645720 . + . ID=Thaps23054;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5H2];external_name=Thaps23054;logic_name=jgi_thaps3 chr6 ensembl transcript 643342 645720 . + . ID=Thaps23054;Parent=Thaps23054;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 643342 643791 . + 0 ID=Thaps23054;Parent=Thaps23054;rank=1 chr6 . exon 643342 643791 . + . ID=Thaps23054.1;Parent=Thaps23054;constitutive=1;rank=1 chr6 . CDS 643880 644826 . + 0 ID=Thaps23054;Parent=Thaps23054;rank=2 chr6 . exon 643880 644826 . + . ID=Thaps23054.2;Parent=Thaps23054;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 644901 645417 . + 0 ID=Thaps23054;Parent=Thaps23054;rank=3 chr6 . exon 644901 645417 . + . ID=Thaps23054.3;Parent=Thaps23054;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 645577 645720 . + 0 ID=Thaps23054;Parent=Thaps23054;rank=4 chr6 . exon 645577 645720 . + . ID=Thaps23054.4;Parent=Thaps23054;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 647019 649154 . + . ID=Thaps23055;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5H3];external_name=Thaps23055;logic_name=jgi_thaps3 chr6 ensembl transcript 647019 649154 . + . ID=Thaps23055;Parent=Thaps23055;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 647019 648872 . + 0 ID=Thaps23055;Parent=Thaps23055;rank=1 chr6 . exon 647019 648872 . + . ID=Thaps23055.1;Parent=Thaps23055;constitutive=1;rank=1 chr6 . CDS 648951 649154 . + 0 ID=Thaps23055;Parent=Thaps23055;rank=2 chr6 ensembl protein_coding_gene 640142 641824 . + . ID=Thaps35095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5H0];external_name=Thaps35095;logic_name=jgi_thaps3 chr6 ensembl transcript 640142 641824 . + . ID=Thaps35095;Parent=Thaps35095;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 640142 640208 . + 0 ID=Thaps35095;Parent=Thaps35095;rank=1 chr6 . exon 640142 640208 . + . ID=Thaps35095.1;Parent=Thaps35095;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 640245 640526 . + 0 ID=Thaps35095;Parent=Thaps35095;rank=2 chr6 . exon 640245 640526 . + . ID=Thaps35095.2;Parent=Thaps35095;constitutive=1;rank=2 chr6 . CDS 640596 641615 . + 0 ID=Thaps35095;Parent=Thaps35095;rank=3 chr6 . exon 640596 641615 . + . ID=Thaps35095.3;Parent=Thaps35095;constitutive=1;rank=3 chr6 . CDS 641685 641824 . + 0 ID=Thaps35095;Parent=Thaps35095;rank=4 chr6 . exon 641685 641824 . + . ID=Thaps35095.4;Parent=Thaps35095;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 642374 643004 . + . ID=Thaps6071;biotype=protein_coding;description=RL22%2C ribosomal protein 22 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C5H1];external_name=RL22;logic_name=jgi_thaps3 chr6 ensembl transcript 642374 643004 . + . ID=Thaps6071;Parent=Thaps6071;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 642374 642376 . + 0 ID=Thaps6071;Parent=Thaps6071;rank=1 chr6 . exon 642374 642376 . + . ID=Thaps6071.1;Parent=Thaps6071;constitutive=1;rank=1 chr6 . CDS 642639 643004 . + 0 ID=Thaps6071;Parent=Thaps6071;rank=2 chr6 . exon 642639 643004 . + . ID=Thaps6071.2;Parent=Thaps6071;constitutive=1;rank=2 chr6 . repeat_region 652313 652376 . ? . description=dust chr6 . repeat_region 655361 655368 . ? . description=dust chr6 . exon 648951 649154 . + . ID=Thaps23055.2;Parent=Thaps23055;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 653441 655117 . - . ID=Thaps23058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5H6];external_name=Thaps23058;logic_name=jgi_thaps3 chr6 ensembl transcript 653441 655117 . - . ID=Thaps23058;Parent=Thaps23058;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 653441 655117 . - 0 ID=Thaps23058;Parent=Thaps23058;rank=1 chr6 . exon 653441 655117 . - . ID=Thaps23058.1;Parent=Thaps23058;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 655618 656144 . - . ID=Thaps28570;biotype=protein_coding;description=L7Ae%2C ribosomal protein 7Ae 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C5H7];external_name=L7AE;logic_name=jgi_thaps3 chr6 ensembl transcript 655618 656144 . - . ID=Thaps28570;Parent=Thaps28570;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 655618 655750 . - 0 ID=Thaps28570;Parent=Thaps28570;rank=2 chr6 . exon 655618 655750 . - . ID=Thaps28570.2;Parent=Thaps28570;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 655906 656144 . - 0 ID=Thaps28570;Parent=Thaps28570;rank=1 chr6 . exon 655906 656144 . - . ID=Thaps28570.1;Parent=Thaps28570;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 652551 653249 . + . ID=Thaps40978;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5H5];external_name=Thaps40978;logic_name=jgi_thaps3 chr6 ensembl transcript 652551 653249 . + . ID=Thaps40978;Parent=Thaps40978;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 652551 653249 . + 0 ID=Thaps40978;Parent=Thaps40978;rank=1 chr6 . exon 652551 653249 . + . ID=Thaps40978.1;Parent=Thaps40978;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 656401 658023 . + . ID=Thaps40985;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5H8];external_name=Thaps40985;logic_name=jgi_thaps3 chr6 ensembl transcript 656401 658023 . + . ID=Thaps40985;Parent=Thaps40985;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 656401 657855 . + 0 ID=Thaps40985;Parent=Thaps40985;rank=1 chr6 . exon 656401 657855 . + . ID=Thaps40985.1;Parent=Thaps40985;constitutive=1;rank=1 chr6 . CDS 657937 658023 . + 0 ID=Thaps40985;Parent=Thaps40985;rank=2 chr6 ensembl protein_coding_gene 650239 651828 . + . ID=Thaps6075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5H4];external_name=Thaps6075;logic_name=jgi_thaps3 chr6 ensembl transcript 650239 651828 . + . ID=Thaps6075;Parent=Thaps6075;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 650239 651828 . + 0 ID=Thaps6075;Parent=Thaps6075;rank=1 chr6 . exon 650239 651828 . + . ID=Thaps6075.1;Parent=Thaps6075;constitutive=1;rank=1 chr6 . biological_region 660143 660147 0.999 + . logic_name=eponine chr6 ensembl protein_coding_gene 658101 660638 . - . ID=Thaps23061;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5H9];external_name=Thaps23061;logic_name=jgi_thaps3 chr6 ensembl transcript 658101 660638 . - . ID=Thaps23061;Parent=Thaps23061;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 658101 660638 . - 0 ID=Thaps23061;Parent=Thaps23061;rank=1 chr6 . exon 658101 660638 . - . ID=Thaps23061.1;Parent=Thaps23061;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 662369 663436 . + . ID=Thaps35046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5I0];external_name=Thaps35046;logic_name=jgi_thaps3 chr6 ensembl transcript 662369 663436 . + . ID=Thaps35046;Parent=Thaps35046;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 662369 663436 . + 0 ID=Thaps35046;Parent=Thaps35046;rank=1 chr6 . exon 662369 663436 . + . ID=Thaps35046.1;Parent=Thaps35046;constitutive=1;rank=1 chr6 . exon 657937 658023 . + . ID=Thaps40985.2;Parent=Thaps40985;constitutive=1;rank=2 chr6 . repeat_region 671823 671847 . ? . description=trf chr6 . repeat_region 676305 676377 . ? . description=trf chr6 ensembl protein_coding_gene 671693 675162 . + . ID=Thaps23064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5I1];external_name=Thaps23064;logic_name=jgi_thaps3 chr6 ensembl transcript 671693 675162 . + . ID=Thaps23064;Parent=Thaps23064;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 671693 672305 . + 0 ID=Thaps23064;Parent=Thaps23064;rank=1 chr6 . exon 671693 672305 . + . ID=Thaps23064.1;Parent=Thaps23064;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 672409 673031 . + 0 ID=Thaps23064;Parent=Thaps23064;rank=2 chr6 . exon 672409 673031 . + . ID=Thaps23064.2;Parent=Thaps23064;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 673112 674914 . + 0 ID=Thaps23064;Parent=Thaps23064;rank=3 chr6 . exon 673112 674914 . + . ID=Thaps23064.3;Parent=Thaps23064;constitutive=1;rank=3 chr6 . CDS 675007 675162 . + 0 ID=Thaps23064;Parent=Thaps23064;rank=4 chr6 . exon 675007 675162 . + . ID=Thaps23064.4;Parent=Thaps23064;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 676007 677271 . + . ID=Thaps262803;biotype=protein_coding;description=Syntaxin [Source:UniProtKB/TrEMBL%3BAcc:B8C5I2];external_name=Thaps262803;logic_name=jgi_thaps3 chr6 ensembl transcript 676007 677271 . + . ID=Thaps262803;Parent=Thaps262803;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 676007 676399 . + 0 ID=Thaps262803;Parent=Thaps262803;rank=1 chr6 . exon 676007 676399 . + . ID=Thaps262803.1;Parent=Thaps262803;constitutive=1;rank=1 chr6 . CDS 676448 676531 . + 0 ID=Thaps262803;Parent=Thaps262803;rank=2 chr6 . exon 676448 676531 . + . ID=Thaps262803.2;Parent=Thaps262803;constitutive=1;rank=2 chr6 . CDS 676631 676676 . + 0 ID=Thaps262803;Parent=Thaps262803;rank=3 chr6 . exon 676631 676676 . + . ID=Thaps262803.3;Parent=Thaps262803;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 676772 676816 . + 0 ID=Thaps262803;Parent=Thaps262803;rank=4 chr6 . exon 676772 676816 . + . ID=Thaps262803.4;Parent=Thaps262803;constitutive=1;rank=4 chr6 . CDS 676952 677271 . + 0 ID=Thaps262803;Parent=Thaps262803;rank=5 chr6 . exon 676952 677271 . + . ID=Thaps262803.5;Parent=Thaps262803;constitutive=1;ensembl_end_phase=2;rank=5 chr6 ensembl protein_coding_gene 683190 684193 . - . ID=Thaps23066;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5I6];external_name=Thaps23066;logic_name=jgi_thaps3 chr6 ensembl transcript 683190 684193 . - . ID=Thaps23066;Parent=Thaps23066;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 683190 683218 . - 0 ID=Thaps23066;Parent=Thaps23066;rank=2 chr6 . exon 683190 683218 . - . ID=Thaps23066.2;Parent=Thaps23066;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 683326 684193 . - 0 ID=Thaps23066;Parent=Thaps23066;rank=1 chr6 . exon 683326 684193 . - . ID=Thaps23066.1;Parent=Thaps23066;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 678019 678776 . - . ID=Thaps35107;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5I3];external_name=Thaps35107;logic_name=jgi_thaps3 chr6 ensembl transcript 678019 678776 . - . ID=Thaps35107;Parent=Thaps35107;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 678019 678248 . - 0 ID=Thaps35107;Parent=Thaps35107;rank=3 chr6 . exon 678019 678248 . - . ID=Thaps35107.3;Parent=Thaps35107;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 678341 678420 . - 0 ID=Thaps35107;Parent=Thaps35107;rank=2 chr6 . exon 678341 678420 . - . ID=Thaps35107.2;Parent=Thaps35107;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 678667 678776 . - 0 ID=Thaps35107;Parent=Thaps35107;rank=1 chr6 . exon 678667 678776 . - . ID=Thaps35107.1;Parent=Thaps35107;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 679207 682126 . + . ID=Thaps6086;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5I4];external_name=Thaps6086;logic_name=jgi_thaps3 chr6 ensembl transcript 679207 682126 . + . ID=Thaps6086;Parent=Thaps6086;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 679207 679804 . + 0 ID=Thaps6086;Parent=Thaps6086;rank=1 chr6 . exon 679207 679804 . + . ID=Thaps6086.1;Parent=Thaps6086;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 679911 680963 . + 0 ID=Thaps6086;Parent=Thaps6086;rank=2 chr6 . exon 679911 680963 . + . ID=Thaps6086.2;Parent=Thaps6086;constitutive=1;rank=2 chr6 . CDS 681057 682126 . + 0 ID=Thaps6086;Parent=Thaps6086;rank=3 chr6 . exon 681057 682126 . + . ID=Thaps6086.3;Parent=Thaps6086;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 682310 682822 . - . ID=Thaps6087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5I5];external_name=Thaps6087;logic_name=jgi_thaps3 chr6 ensembl transcript 682310 682822 . - . ID=Thaps6087;Parent=Thaps6087;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 682310 682822 . - 0 ID=Thaps6087;Parent=Thaps6087;rank=1 chr6 . exon 682310 682822 . - . ID=Thaps6087.1;Parent=Thaps6087;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 684520 686280 . + . ID=Thaps6089;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5I7];external_name=Thaps6089;logic_name=jgi_thaps3 chr6 ensembl transcript 684520 686280 . + . ID=Thaps6089;Parent=Thaps6089;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 684520 684611 . + 0 ID=Thaps6089;Parent=Thaps6089;rank=1 chr6 . exon 684520 684611 . + . ID=Thaps6089.1;Parent=Thaps6089;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 684902 685550 . + 0 ID=Thaps6089;Parent=Thaps6089;rank=2 chr6 . exon 684902 685550 . + . ID=Thaps6089.2;Parent=Thaps6089;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 685638 685790 . + 0 ID=Thaps6089;Parent=Thaps6089;rank=3 chr6 . exon 685638 685790 . + . ID=Thaps6089.3;Parent=Thaps6089;constitutive=1;rank=3 chr6 . CDS 685852 686280 . + 0 ID=Thaps6089;Parent=Thaps6089;rank=4 chr6 . exon 685852 686280 . + . ID=Thaps6089.4;Parent=Thaps6089;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 686529 687487 . + . ID=Thaps6090;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5I8];external_name=Thaps6090;logic_name=jgi_thaps3 chr6 ensembl transcript 686529 687487 . + . ID=Thaps6090;Parent=Thaps6090;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 686529 686871 . + 0 ID=Thaps6090;Parent=Thaps6090;rank=1 chr6 . exon 686529 686871 . + . ID=Thaps6090.1;Parent=Thaps6090;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 686946 686980 . + 0 ID=Thaps6090;Parent=Thaps6090;rank=2 chr6 . exon 686946 686980 . + . ID=Thaps6090.2;Parent=Thaps6090;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 687105 687487 . + 0 ID=Thaps6090;Parent=Thaps6090;rank=3 chr6 . exon 687105 687487 . + . ID=Thaps6090.3;Parent=Thaps6090;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . repeat_region 690974 691022 . ? . description=trf chr6 . repeat_region 695319 695337 . ? . description=dust chr6 . repeat_region 695800 695821 . ? . description=trf chr6 . repeat_region 695800 695821 . ? . description=dust chr6 ensembl protein_coding_gene 692374 693146 . - . ID=Thaps262807;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5J2];external_name=Thaps262807;logic_name=jgi_thaps3 chr6 ensembl transcript 692374 693146 . - . ID=Thaps262807;Parent=Thaps262807;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 692374 692901 . - 0 ID=Thaps262807;Parent=Thaps262807;rank=2 chr6 . exon 692374 692901 . - . ID=Thaps262807.2;Parent=Thaps262807;constitutive=1;rank=2 chr6 . CDS 692993 693146 . - 0 ID=Thaps262807;Parent=Thaps262807;rank=1 chr6 . exon 692993 693146 . - . ID=Thaps262807.1;Parent=Thaps262807;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 687591 689231 . - . ID=Thaps269057;biotype=protein_coding;description=Phosphoglycerate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C5I9];external_name=PGK4;logic_name=jgi_thaps3 chr6 ensembl transcript 687591 689231 . - . ID=Thaps269057;Parent=Thaps269057;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 687591 688072 . - 0 ID=Thaps269057;Parent=Thaps269057;rank=3 chr6 . exon 687591 688072 . - . ID=Thaps269057.3;Parent=Thaps269057;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 688094 689108 . - 0 ID=Thaps269057;Parent=Thaps269057;rank=2 chr6 . exon 688094 689108 . - . ID=Thaps269057.2;Parent=Thaps269057;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 689205 689231 . - 0 ID=Thaps269057;Parent=Thaps269057;rank=1 chr6 . exon 689205 689231 . - . ID=Thaps269057.1;Parent=Thaps269057;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 690471 690836 . - . ID=Thaps34746;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5J0];external_name=Thaps34746;logic_name=jgi_thaps3 chr6 ensembl transcript 690471 690836 . - . ID=Thaps34746;Parent=Thaps34746;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 690471 690836 . - 0 ID=Thaps34746;Parent=Thaps34746;rank=1 chr6 . exon 690471 690836 . - . ID=Thaps34746.1;Parent=Thaps34746;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 695638 697647 . + . ID=Thaps40991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5J4];external_name=Thaps40991;logic_name=jgi_thaps3 chr6 ensembl transcript 695638 697647 . + . ID=Thaps40991;Parent=Thaps40991;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 695638 695880 . + 0 ID=Thaps40991;Parent=Thaps40991;rank=1 chr6 . exon 695638 695880 . + . ID=Thaps40991.1;Parent=Thaps40991;constitutive=1;rank=1 chr6 . CDS 695983 696653 . + 0 ID=Thaps40991;Parent=Thaps40991;rank=2 chr6 . exon 695983 696653 . + . ID=Thaps40991.2;Parent=Thaps40991;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 696741 697647 . + 0 ID=Thaps40991;Parent=Thaps40991;rank=3 chr6 . exon 696741 697647 . + . ID=Thaps40991.3;Parent=Thaps40991;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 691280 691837 . + . ID=Thaps6093;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5J1];external_name=Thaps6093;logic_name=jgi_thaps3 chr6 ensembl transcript 691280 691837 . + . ID=Thaps6093;Parent=Thaps6093;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 691280 691837 . + 0 ID=Thaps6093;Parent=Thaps6093;rank=1 chr6 . exon 691280 691837 . + . ID=Thaps6093.1;Parent=Thaps6093;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 693862 694503 . - . ID=Thaps6095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5J3];external_name=Thaps6095;logic_name=jgi_thaps3 chr6 ensembl transcript 693862 694503 . - . ID=Thaps6095;Parent=Thaps6095;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 693862 694503 . - 0 ID=Thaps6095;Parent=Thaps6095;rank=1 chr6 . exon 693862 694503 . - . ID=Thaps6095.1;Parent=Thaps6095;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 699960 701147 . + . ID=Thaps23070;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5J7];external_name=Thaps23070;logic_name=jgi_thaps3 chr6 ensembl transcript 699960 701147 . + . ID=Thaps23070;Parent=Thaps23070;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 699960 701147 . + 0 ID=Thaps23070;Parent=Thaps23070;rank=1 chr6 . exon 699960 701147 . + . ID=Thaps23070.1;Parent=Thaps23070;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 701221 703686 . - . ID=Thaps23071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5J8];external_name=Thaps23071;logic_name=jgi_thaps3 chr6 ensembl transcript 701221 703686 . - . ID=Thaps23071;Parent=Thaps23071;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 701221 703686 . - 0 ID=Thaps23071;Parent=Thaps23071;rank=1 chr6 . exon 701221 703686 . - . ID=Thaps23071.1;Parent=Thaps23071;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 704212 706741 . + . ID=Thaps23072;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5J9];external_name=Thaps23072;logic_name=jgi_thaps3 chr6 ensembl transcript 704212 706741 . + . ID=Thaps23072;Parent=Thaps23072;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 704212 705287 . + 0 ID=Thaps23072;Parent=Thaps23072;rank=1 chr6 . exon 704212 705287 . + . ID=Thaps23072.1;Parent=Thaps23072;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 705376 706741 . + 0 ID=Thaps23072;Parent=Thaps23072;rank=2 chr6 . exon 705376 706741 . + . ID=Thaps23072.2;Parent=Thaps23072;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 698621 699394 . - . ID=Thaps262809;biotype=protein_coding;description=Peroxisomal ascorbate peroxidase [Source:UniProtKB/TrEMBL%3BAcc:B8C5J6];external_name=Thaps262809;logic_name=jgi_thaps3 chr6 ensembl transcript 698621 699394 . - . ID=Thaps262809;Parent=Thaps262809;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 698621 698878 . - 0 ID=Thaps262809;Parent=Thaps262809;rank=3 chr6 . exon 698621 698878 . - . ID=Thaps262809.3;Parent=Thaps262809;constitutive=1;rank=3 chr6 . CDS 698930 699323 . - 0 ID=Thaps262809;Parent=Thaps262809;rank=2 chr6 . exon 698930 699323 . - . ID=Thaps262809.2;Parent=Thaps262809;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 699342 699394 . - 0 ID=Thaps262809;Parent=Thaps262809;rank=1 chr6 . exon 699342 699394 . - . ID=Thaps262809.1;Parent=Thaps262809;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 706932 708215 . - . ID=Thaps516;biotype=protein_coding;description=26S proteasome ATPase regulatory subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C5K0];external_name=RPT5;logic_name=jgi_thaps3 chr6 ensembl transcript 706932 708215 . - . ID=Thaps516;Parent=Thaps516;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 706932 708215 . - 0 ID=Thaps516;Parent=Thaps516;rank=1 chr6 . exon 706932 708215 . - . ID=Thaps516.1;Parent=Thaps516;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 698060 698500 . + . ID=Thaps6097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5J5];external_name=Thaps6097;logic_name=jgi_thaps3 chr6 ensembl transcript 698060 698500 . + . ID=Thaps6097;Parent=Thaps6097;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 698060 698500 . + 0 ID=Thaps6097;Parent=Thaps6097;rank=1 chr6 . exon 698060 698500 . + . ID=Thaps6097.1;Parent=Thaps6097;constitutive=1;rank=1 chr6 . repeat_region 708272 708291 . ? . description=trf chr6 . repeat_region 708272 708291 . ? . description=dust chr6 ensembl protein_coding_gene 717063 718730 . + . ID=Thaps23074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5K7];external_name=Thaps23074;logic_name=jgi_thaps3 chr6 ensembl transcript 717063 718730 . + . ID=Thaps23074;Parent=Thaps23074;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 717063 718730 . + 0 ID=Thaps23074;Parent=Thaps23074;rank=1 chr6 . exon 717063 718730 . + . ID=Thaps23074.1;Parent=Thaps23074;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 716304 716768 . - . ID=Thaps34672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5K6];external_name=Thaps34672;logic_name=jgi_thaps3 chr6 ensembl transcript 716304 716768 . - . ID=Thaps34672;Parent=Thaps34672;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 716304 716498 . - 0 ID=Thaps34672;Parent=Thaps34672;rank=2 chr6 . exon 716304 716498 . - . ID=Thaps34672.2;Parent=Thaps34672;constitutive=1;rank=2 chr6 . CDS 716703 716768 . - 0 ID=Thaps34672;Parent=Thaps34672;rank=1 chr6 . exon 716703 716768 . - . ID=Thaps34672.1;Parent=Thaps34672;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 713936 714772 . + . ID=Thaps35085;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5K4];external_name=Thaps35085;logic_name=jgi_thaps3 chr6 ensembl transcript 713936 714772 . + . ID=Thaps35085;Parent=Thaps35085;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 713936 714772 . + 0 ID=Thaps35085;Parent=Thaps35085;rank=1 chr6 . exon 713936 714772 . + . ID=Thaps35085.1;Parent=Thaps35085;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 708902 710215 . + . ID=Thaps517;biotype=protein_coding;description=Proteasome subunit alpha type [Source:UniProtKB/TrEMBL%3BAcc:B8C5K1];external_name=PSA1;logic_name=jgi_thaps3 chr6 ensembl transcript 708902 710215 . + . ID=Thaps517;Parent=Thaps517;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 708902 708964 . + 0 ID=Thaps517;Parent=Thaps517;rank=1 chr6 . exon 708902 708964 . + . ID=Thaps517.1;Parent=Thaps517;constitutive=1;rank=1 chr6 . CDS 709064 709710 . + 0 ID=Thaps517;Parent=Thaps517;rank=2 chr6 . exon 709064 709710 . + . ID=Thaps517.2;Parent=Thaps517;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 710107 710215 . + 0 ID=Thaps517;Parent=Thaps517;rank=3 chr6 . exon 710107 710215 . + . ID=Thaps517.3;Parent=Thaps517;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 714743 715889 . + . ID=Thaps518;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5K5];external_name=Thaps518;logic_name=jgi_thaps3 chr6 ensembl transcript 714743 715889 . + . ID=Thaps518;Parent=Thaps518;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 714743 714749 . + 0 ID=Thaps518;Parent=Thaps518;rank=1 chr6 . exon 714743 714749 . + . ID=Thaps518.1;Parent=Thaps518;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 714846 715429 . + 0 ID=Thaps518;Parent=Thaps518;rank=2 chr6 . exon 714846 715429 . + . ID=Thaps518.2;Parent=Thaps518;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 715515 715889 . + 0 ID=Thaps518;Parent=Thaps518;rank=3 chr6 . exon 715515 715889 . + . ID=Thaps518.3;Parent=Thaps518;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 710354 711076 . - . ID=Thaps6104;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5K2];external_name=Thaps6104;logic_name=jgi_thaps3 chr6 ensembl transcript 710354 711076 . - . ID=Thaps6104;Parent=Thaps6104;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 710354 711076 . - 0 ID=Thaps6104;Parent=Thaps6104;rank=1 chr6 . exon 710354 711076 . - . ID=Thaps6104.1;Parent=Thaps6104;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 711857 713304 . + . ID=Thaps6105;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5K3];external_name=Thaps6105;logic_name=jgi_thaps3 chr6 ensembl transcript 711857 713304 . + . ID=Thaps6105;Parent=Thaps6105;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 711857 712338 . + 0 ID=Thaps6105;Parent=Thaps6105;rank=1 chr6 . exon 711857 712338 . + . ID=Thaps6105.1;Parent=Thaps6105;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 712420 712789 . + 0 ID=Thaps6105;Parent=Thaps6105;rank=2 chr6 . exon 712420 712789 . + . ID=Thaps6105.2;Parent=Thaps6105;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 712876 713304 . + 0 ID=Thaps6105;Parent=Thaps6105;rank=3 chr6 . exon 712876 713304 . + . ID=Thaps6105.3;Parent=Thaps6105;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 722877 723749 . + . ID=Thaps34684;biotype=protein_coding;description=Trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C5K9];external_name=Thaps34684;logic_name=jgi_thaps3 chr6 ensembl transcript 722877 723749 . + . ID=Thaps34684;Parent=Thaps34684;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 722877 723749 . + 0 ID=Thaps34684;Parent=Thaps34684;rank=1 chr6 . exon 722877 723749 . + . ID=Thaps34684.1;Parent=Thaps34684;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 719370 720928 . + . ID=Thaps40995;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5K8];external_name=Thaps40995;logic_name=jgi_thaps3 chr6 ensembl transcript 719370 720928 . + . ID=Thaps40995;Parent=Thaps40995;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 719370 719483 . + 0 ID=Thaps40995;Parent=Thaps40995;rank=1 chr6 . exon 719370 719483 . + . ID=Thaps40995.1;Parent=Thaps40995;constitutive=1;rank=1 chr6 . CDS 719532 720488 . + 0 ID=Thaps40995;Parent=Thaps40995;rank=2 chr6 . exon 719532 720488 . + . ID=Thaps40995.2;Parent=Thaps40995;constitutive=1;rank=2 chr6 . CDS 720593 720928 . + 0 ID=Thaps40995;Parent=Thaps40995;rank=3 chr6 . exon 720593 720928 . + . ID=Thaps40995.3;Parent=Thaps40995;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 723939 729424 . - . ID=Thaps6112;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5L0];external_name=Thaps6112;logic_name=jgi_thaps3 chr6 ensembl transcript 723939 729424 . - . ID=Thaps6112;Parent=Thaps6112;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 723939 727223 . - 0 ID=Thaps6112;Parent=Thaps6112;rank=4 chr6 . exon 723939 727223 . - . ID=Thaps6112.4;Parent=Thaps6112;constitutive=1;rank=4 chr6 . CDS 727510 728438 . - 0 ID=Thaps6112;Parent=Thaps6112;rank=3 chr6 . CDS 728619 728737 . - 0 ID=Thaps6112;Parent=Thaps6112;rank=2 chr6 . CDS 728837 729424 . - 0 ID=Thaps6112;Parent=Thaps6112;rank=1 chr6 ensembl protein_coding_gene 730379 730534 . + . ID=Thaps262815;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5L1];external_name=MYB16;logic_name=jgi_thaps3 chr6 ensembl transcript 730379 730534 . + . ID=Thaps262815;Parent=Thaps262815;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 730379 730534 . + 0 ID=Thaps262815;Parent=Thaps262815;rank=1 chr6 . exon 730379 730534 . + . ID=Thaps262815.1;Parent=Thaps262815;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 730988 734251 . + . ID=Thaps269060;biotype=protein_coding;description=Histone deacetylase [Source:UniProtKB/TrEMBL%3BAcc:B8C5L2];external_name=Thaps269060;logic_name=jgi_thaps3 chr6 ensembl transcript 730988 734251 . + . ID=Thaps269060;Parent=Thaps269060;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 730988 731652 . + 0 ID=Thaps269060;Parent=Thaps269060;rank=1 chr6 . exon 730988 731652 . + . ID=Thaps269060.1;Parent=Thaps269060;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 731742 731868 . + 0 ID=Thaps269060;Parent=Thaps269060;rank=2 chr6 . exon 731742 731868 . + . ID=Thaps269060.2;Parent=Thaps269060;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 732091 732226 . + 0 ID=Thaps269060;Parent=Thaps269060;rank=3 chr6 . exon 732091 732226 . + . ID=Thaps269060.3;Parent=Thaps269060;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 732313 733069 . + 0 ID=Thaps269060;Parent=Thaps269060;rank=4 chr6 . exon 732313 733069 . + . ID=Thaps269060.4;Parent=Thaps269060;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 733150 733525 . + 0 ID=Thaps269060;Parent=Thaps269060;rank=5 chr6 . exon 733150 733525 . + . ID=Thaps269060.5;Parent=Thaps269060;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 733751 734251 . + 0 ID=Thaps269060;Parent=Thaps269060;rank=6 chr6 . exon 733751 734251 . + . ID=Thaps269060.6;Parent=Thaps269060;constitutive=1;rank=6 chr6 ensembl protein_coding_gene 735946 737818 . + . ID=Thaps34982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5L4];external_name=Thaps34982;logic_name=jgi_thaps3 chr6 ensembl transcript 735946 737818 . + . ID=Thaps34982;Parent=Thaps34982;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 735946 736077 . + 0 ID=Thaps34982;Parent=Thaps34982;rank=1 chr6 . exon 735946 736077 . + . ID=Thaps34982.1;Parent=Thaps34982;constitutive=1;rank=1 chr6 . CDS 736180 736505 . + 0 ID=Thaps34982;Parent=Thaps34982;rank=2 chr6 . exon 736180 736505 . + . ID=Thaps34982.2;Parent=Thaps34982;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 736560 736754 . + 0 ID=Thaps34982;Parent=Thaps34982;rank=3 chr6 . exon 736560 736754 . + . ID=Thaps34982.3;Parent=Thaps34982;constitutive=1;rank=3 chr6 . CDS 737371 737818 . + 0 ID=Thaps34982;Parent=Thaps34982;rank=4 chr6 . exon 727510 728438 . - . ID=Thaps6112.3;Parent=Thaps6112;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . exon 728619 728737 . - . ID=Thaps6112.2;Parent=Thaps6112;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . exon 728837 729424 . - . ID=Thaps6112.1;Parent=Thaps6112;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 734367 735164 . - . ID=Thaps6114;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5L3];external_name=Thaps6114;logic_name=jgi_thaps3 chr6 ensembl transcript 734367 735164 . - . ID=Thaps6114;Parent=Thaps6114;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 734367 735164 . - 0 ID=Thaps6114;Parent=Thaps6114;rank=1 chr6 . exon 734367 735164 . - . ID=Thaps6114.1;Parent=Thaps6114;constitutive=1;rank=1 chr6 . repeat_region 739220 739240 . ? . description=dust chr6 . repeat_region 740063 740126 . ? . description=dust chr6 . repeat_region 741049 741074 . ? . description=dust chr6 . repeat_region 741114 741139 . ? . description=dust chr6 ensembl protein_coding_gene 745173 745760 . - . ID=Thaps17935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5L5];external_name=Thaps17935;logic_name=jgi_thaps3 chr6 ensembl transcript 745173 745760 . - . ID=Thaps17935;Parent=Thaps17935;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 745173 745552 . - 0 ID=Thaps17935;Parent=Thaps17935;rank=2 chr6 . exon 745173 745552 . - . ID=Thaps17935.2;Parent=Thaps17935;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 745598 745760 . - 0 ID=Thaps17935;Parent=Thaps17935;rank=1 chr6 . exon 745598 745760 . - . ID=Thaps17935.1;Parent=Thaps17935;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 746839 747915 . - . ID=Thaps28592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5L6];external_name=Thaps28592;logic_name=jgi_thaps3 chr6 ensembl transcript 746839 747915 . - . ID=Thaps28592;Parent=Thaps28592;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 746839 747915 . - 0 ID=Thaps28592;Parent=Thaps28592;rank=1 chr6 . exon 746839 747915 . - . ID=Thaps28592.1;Parent=Thaps28592;constitutive=1;rank=1 chr6 . exon 737371 737818 . + . ID=Thaps34982.4;Parent=Thaps34982;constitutive=1;ensembl_end_phase=1;rank=4 chr6 ensembl protein_coding_gene 753172 754548 . + . ID=Thaps23079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5L8];external_name=Thaps23079;logic_name=jgi_thaps3 chr6 ensembl transcript 753172 754548 . + . ID=Thaps23079;Parent=Thaps23079;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 753172 753269 . + 0 ID=Thaps23079;Parent=Thaps23079;rank=1 chr6 . exon 753172 753269 . + . ID=Thaps23079.1;Parent=Thaps23079;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 753423 753451 . + 0 ID=Thaps23079;Parent=Thaps23079;rank=2 chr6 . exon 753423 753451 . + . ID=Thaps23079.2;Parent=Thaps23079;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 753746 754548 . + 0 ID=Thaps23079;Parent=Thaps23079;rank=3 chr6 . exon 753746 754548 . + . ID=Thaps23079.3;Parent=Thaps23079;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 756411 757068 . - . ID=Thaps262819;biotype=protein_coding;description=Tom70-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5L9];external_name=Thaps262819;logic_name=jgi_thaps3 chr6 ensembl transcript 756411 757068 . - . ID=Thaps262819;Parent=Thaps262819;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 756411 757068 . - 0 ID=Thaps262819;Parent=Thaps262819;rank=1 chr6 . exon 756411 757068 . - . ID=Thaps262819.1;Parent=Thaps262819;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 749384 751469 . - . ID=Thaps34973;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5L7];external_name=Thaps34973;logic_name=jgi_thaps3 chr6 ensembl transcript 749384 751469 . - . ID=Thaps34973;Parent=Thaps34973;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 749384 750250 . - 0 ID=Thaps34973;Parent=Thaps34973;rank=6 chr6 . exon 749384 750250 . - . ID=Thaps34973.6;Parent=Thaps34973;constitutive=1;rank=6 chr6 . CDS 750323 750522 . - 0 ID=Thaps34973;Parent=Thaps34973;rank=5 chr6 . exon 750323 750522 . - . ID=Thaps34973.5;Parent=Thaps34973;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 750599 750781 . - 0 ID=Thaps34973;Parent=Thaps34973;rank=4 chr6 . exon 750599 750781 . - . ID=Thaps34973.4;Parent=Thaps34973;constitutive=1;rank=4 chr6 . CDS 750851 751091 . - 0 ID=Thaps34973;Parent=Thaps34973;rank=3 chr6 . exon 750851 751091 . - . ID=Thaps34973.3;Parent=Thaps34973;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 751152 751216 . - 0 ID=Thaps34973;Parent=Thaps34973;rank=2 chr6 . exon 751152 751216 . - . ID=Thaps34973.2;Parent=Thaps34973;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 751268 751469 . - 0 ID=Thaps34973;Parent=Thaps34973;rank=1 chr6 . exon 751268 751469 . - . ID=Thaps34973.1;Parent=Thaps34973;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 761925 761958 . ? . description=trf chr6 ensembl protein_coding_gene 765235 767182 . + . ID=Thaps23081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5M3];external_name=Thaps23081;logic_name=jgi_thaps3 chr6 ensembl transcript 765235 767182 . + . ID=Thaps23081;Parent=Thaps23081;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 765235 765739 . + 0 ID=Thaps23081;Parent=Thaps23081;rank=1 chr6 . exon 765235 765739 . + . ID=Thaps23081.1;Parent=Thaps23081;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 765808 765961 . + 0 ID=Thaps23081;Parent=Thaps23081;rank=2 chr6 . exon 765808 765961 . + . ID=Thaps23081.2;Parent=Thaps23081;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 766054 766130 . + 0 ID=Thaps23081;Parent=Thaps23081;rank=3 chr6 . exon 766054 766130 . + . ID=Thaps23081.3;Parent=Thaps23081;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 766266 767182 . + 0 ID=Thaps23081;Parent=Thaps23081;rank=4 chr6 . exon 766266 767182 . + . ID=Thaps23081.4;Parent=Thaps23081;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 759114 761924 . - . ID=Thaps6121;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5M0];external_name=Thaps6121;logic_name=jgi_thaps3 chr6 ensembl transcript 759114 761924 . - . ID=Thaps6121;Parent=Thaps6121;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 759114 759261 . - 0 ID=Thaps6121;Parent=Thaps6121;rank=4 chr6 . exon 759114 759261 . - . ID=Thaps6121.4;Parent=Thaps6121;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 759352 759461 . - 0 ID=Thaps6121;Parent=Thaps6121;rank=3 chr6 . exon 759352 759461 . - . ID=Thaps6121.3;Parent=Thaps6121;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 759528 759909 . - 0 ID=Thaps6121;Parent=Thaps6121;rank=2 chr6 . exon 759528 759909 . - . ID=Thaps6121.2;Parent=Thaps6121;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 759979 761924 . - 0 ID=Thaps6121;Parent=Thaps6121;rank=1 chr6 . exon 759979 761924 . - . ID=Thaps6121.1;Parent=Thaps6121;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 762508 763683 . + . ID=Thaps6122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5M1];external_name=Thaps6122;logic_name=jgi_thaps3 chr6 ensembl transcript 762508 763683 . + . ID=Thaps6122;Parent=Thaps6122;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 762508 763683 . + 0 ID=Thaps6122;Parent=Thaps6122;rank=1 chr6 . exon 762508 763683 . + . ID=Thaps6122.1;Parent=Thaps6122;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 763904 764639 . - . ID=Thaps6123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5M2];external_name=Thaps6123;logic_name=jgi_thaps3 chr6 ensembl transcript 763904 764639 . - . ID=Thaps6123;Parent=Thaps6123;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 763904 763963 . - 0 ID=Thaps6123;Parent=Thaps6123;rank=2 chr6 . exon 763904 763963 . - . ID=Thaps6123.2;Parent=Thaps6123;constitutive=1;rank=2 chr6 . CDS 764013 764639 . - 0 ID=Thaps6123;Parent=Thaps6123;rank=1 chr6 . exon 764013 764639 . - . ID=Thaps6123.1;Parent=Thaps6123;constitutive=1;rank=1 chr6 . repeat_region 770609 770743 . + . description=MuDR2_TP chr6 . repeat_region 774413 774543 . + . description=Harbinger3_TP chr6 . repeat_region 774547 774758 . - . description=MuDR2_TP chr6 ensembl protein_coding_gene 767335 769028 . - . ID=Thaps23082;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5M4];external_name=Thaps23082;logic_name=jgi_thaps3 chr6 ensembl transcript 767335 769028 . - . ID=Thaps23082;Parent=Thaps23082;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 767335 767580 . - 0 ID=Thaps23082;Parent=Thaps23082;rank=5 chr6 . exon 767335 767580 . - . ID=Thaps23082.5;Parent=Thaps23082;constitutive=1;rank=5 chr6 . CDS 767667 768091 . - 0 ID=Thaps23082;Parent=Thaps23082;rank=4 chr6 . exon 767667 768091 . - . ID=Thaps23082.4;Parent=Thaps23082;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 768197 768299 . - 0 ID=Thaps23082;Parent=Thaps23082;rank=3 chr6 . exon 768197 768299 . - . ID=Thaps23082.3;Parent=Thaps23082;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 768387 768626 . - 0 ID=Thaps23082;Parent=Thaps23082;rank=2 chr6 . exon 768387 768626 . - . ID=Thaps23082.2;Parent=Thaps23082;constitutive=1;rank=2 chr6 . CDS 768735 769028 . - 0 ID=Thaps23082;Parent=Thaps23082;rank=1 chr6 . exon 768735 769028 . - . ID=Thaps23082.1;Parent=Thaps23082;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 771780 773670 . + . ID=Thaps6126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5M5];external_name=Thaps6126;logic_name=jgi_thaps3 chr6 ensembl transcript 771780 773670 . + . ID=Thaps6126;Parent=Thaps6126;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 771780 771797 . + 0 ID=Thaps6126;Parent=Thaps6126;rank=1 chr6 . exon 771780 771797 . + . ID=Thaps6126.1;Parent=Thaps6126;constitutive=1;rank=1 chr6 . CDS 772070 772505 . + 0 ID=Thaps6126;Parent=Thaps6126;rank=2 chr6 . exon 772070 772505 . + . ID=Thaps6126.2;Parent=Thaps6126;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 772596 772652 . + 0 ID=Thaps6126;Parent=Thaps6126;rank=3 chr6 . exon 772596 772652 . + . ID=Thaps6126.3;Parent=Thaps6126;constitutive=1;rank=3 chr6 . CDS 772734 772927 . + 0 ID=Thaps6126;Parent=Thaps6126;rank=4 chr6 . exon 772734 772927 . + . ID=Thaps6126.4;Parent=Thaps6126;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 773106 773390 . + 0 ID=Thaps6126;Parent=Thaps6126;rank=5 chr6 . exon 773106 773390 . + . ID=Thaps6126.5;Parent=Thaps6126;constitutive=1;rank=5 chr6 . CDS 773473 773526 . + 0 ID=Thaps6126;Parent=Thaps6126;rank=6 chr6 . exon 773473 773526 . + . ID=Thaps6126.6;Parent=Thaps6126;constitutive=1;rank=6 chr6 . CDS 773668 773670 . + 0 ID=Thaps6126;Parent=Thaps6126;rank=7 chr6 . exon 773668 773670 . + . ID=Thaps6126.7;Parent=Thaps6126;constitutive=1;rank=7 chr6 ensembl protein_coding_gene 775020 777568 . - . ID=Thaps6127;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5M6];external_name=Thaps6127;logic_name=jgi_thaps3 chr6 ensembl transcript 775020 777568 . - . ID=Thaps6127;Parent=Thaps6127;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 775020 775783 . - 0 ID=Thaps6127;Parent=Thaps6127;rank=5 chr6 . exon 775020 775783 . - . ID=Thaps6127.5;Parent=Thaps6127;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 775805 775899 . - 0 ID=Thaps6127;Parent=Thaps6127;rank=4 chr6 . exon 775805 775899 . - . ID=Thaps6127.4;Parent=Thaps6127;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 775950 776245 . - 0 ID=Thaps6127;Parent=Thaps6127;rank=3 chr6 . exon 775950 776245 . - . ID=Thaps6127.3;Parent=Thaps6127;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 776357 777100 . - 0 ID=Thaps6127;Parent=Thaps6127;rank=2 chr6 . exon 776357 777100 . - . ID=Thaps6127.2;Parent=Thaps6127;constitutive=1;rank=2 chr6 . CDS 777203 777568 . - 0 ID=Thaps6127;Parent=Thaps6127;rank=1 chr6 . repeat_region 777697 777706 . ? . description=dust chr6 . repeat_region 784912 784933 . ? . description=dust chr6 ensembl protein_coding_gene 777959 779292 . + . ID=Thaps23083;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5M7];external_name=Thaps23083;logic_name=jgi_thaps3 chr6 ensembl transcript 777959 779292 . + . ID=Thaps23083;Parent=Thaps23083;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 777959 778393 . + 0 ID=Thaps23083;Parent=Thaps23083;rank=1 chr6 . exon 777959 778393 . + . ID=Thaps23083.1;Parent=Thaps23083;constitutive=1;rank=1 chr6 . CDS 778549 778663 . + 0 ID=Thaps23083;Parent=Thaps23083;rank=2 chr6 . exon 778549 778663 . + . ID=Thaps23083.2;Parent=Thaps23083;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 778778 779292 . + 0 ID=Thaps23083;Parent=Thaps23083;rank=3 chr6 . exon 778778 779292 . + . ID=Thaps23083.3;Parent=Thaps23083;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 785076 786862 . + . ID=Thaps23084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5N0];external_name=Thaps23084;logic_name=jgi_thaps3 chr6 ensembl transcript 785076 786862 . + . ID=Thaps23084;Parent=Thaps23084;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 785076 785418 . + 0 ID=Thaps23084;Parent=Thaps23084;rank=1 chr6 . exon 785076 785418 . + . ID=Thaps23084.1;Parent=Thaps23084;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 785673 786862 . + 0 ID=Thaps23084;Parent=Thaps23084;rank=2 chr6 . exon 785673 786862 . + . ID=Thaps23084.2;Parent=Thaps23084;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 781590 782437 . + . ID=Thaps262821;biotype=protein_coding;description=Regulatory protease [Source:UniProtKB/TrEMBL%3BAcc:B8C5M8];external_name=Thaps262821;logic_name=jgi_thaps3 chr6 ensembl transcript 781590 782437 . + . ID=Thaps262821;Parent=Thaps262821;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 781590 781954 . + 0 ID=Thaps262821;Parent=Thaps262821;rank=1 chr6 . exon 781590 781954 . + . ID=Thaps262821.1;Parent=Thaps262821;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 782081 782437 . + 0 ID=Thaps262821;Parent=Thaps262821;rank=2 chr6 . exon 782081 782437 . + . ID=Thaps262821.2;Parent=Thaps262821;constitutive=1;rank=2 chr6 . exon 777203 777568 . - . ID=Thaps6127.1;Parent=Thaps6127;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 782662 784739 . - . ID=Thaps6130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5M9];external_name=Thaps6130;logic_name=jgi_thaps3 chr6 ensembl transcript 782662 784739 . - . ID=Thaps6130;Parent=Thaps6130;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 782662 782983 . - 0 ID=Thaps6130;Parent=Thaps6130;rank=3 chr6 . exon 782662 782983 . - . ID=Thaps6130.3;Parent=Thaps6130;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 783059 784054 . - 0 ID=Thaps6130;Parent=Thaps6130;rank=2 chr6 . exon 783059 784054 . - . ID=Thaps6130.2;Parent=Thaps6130;constitutive=1;rank=2 chr6 . CDS 784138 784739 . - 0 ID=Thaps6130;Parent=Thaps6130;rank=1 chr6 . exon 784138 784739 . - . ID=Thaps6130.1;Parent=Thaps6130;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 788378 788406 . ? . description=trf chr6 . repeat_region 788378 788460 . + . description=Harbinger2N_TP chr6 . repeat_region 788381 788409 . ? . description=trf chr6 ensembl protein_coding_gene 789890 791780 . - . ID=Thaps23085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5N3];external_name=Thaps23085;logic_name=jgi_thaps3 chr6 ensembl transcript 789890 791780 . - . ID=Thaps23085;Parent=Thaps23085;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 789890 790975 . - 0 ID=Thaps23085;Parent=Thaps23085;rank=3 chr6 . exon 789890 790975 . - . ID=Thaps23085.3;Parent=Thaps23085;constitutive=1;rank=3 chr6 . CDS 791064 791507 . - 0 ID=Thaps23085;Parent=Thaps23085;rank=2 chr6 . exon 791064 791507 . - . ID=Thaps23085.2;Parent=Thaps23085;constitutive=1;rank=2 chr6 . CDS 791661 791780 . - 0 ID=Thaps23085;Parent=Thaps23085;rank=1 chr6 . exon 791661 791780 . - . ID=Thaps23085.1;Parent=Thaps23085;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 793612 795308 . - . ID=Thaps34968;biotype=protein_coding;description=Mannosyl-oligosaccharide alpha-mannosidase [Source:UniProtKB/TrEMBL%3BAcc:B8C5N4];external_name=Thaps34968;logic_name=jgi_thaps3 chr6 ensembl transcript 793612 795308 . - . ID=Thaps34968;Parent=Thaps34968;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 793612 794171 . - 0 ID=Thaps34968;Parent=Thaps34968;rank=5 chr6 . exon 793612 794171 . - . ID=Thaps34968.5;Parent=Thaps34968;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 794296 794404 . - 0 ID=Thaps34968;Parent=Thaps34968;rank=4 chr6 . exon 794296 794404 . - . ID=Thaps34968.4;Parent=Thaps34968;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 794485 794713 . - 0 ID=Thaps34968;Parent=Thaps34968;rank=3 chr6 . exon 794485 794713 . - . ID=Thaps34968.3;Parent=Thaps34968;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 794789 795106 . - 0 ID=Thaps34968;Parent=Thaps34968;rank=2 chr6 . exon 794789 795106 . - . ID=Thaps34968.2;Parent=Thaps34968;constitutive=1;rank=2 chr6 . CDS 795175 795308 . - 0 ID=Thaps34968;Parent=Thaps34968;rank=1 chr6 . exon 795175 795308 . - . ID=Thaps34968.1;Parent=Thaps34968;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 786931 788220 . - . ID=Thaps6132;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5N1];external_name=Thaps6132;logic_name=jgi_thaps3 chr6 ensembl transcript 786931 788220 . - . ID=Thaps6132;Parent=Thaps6132;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 786931 788220 . - 0 ID=Thaps6132;Parent=Thaps6132;rank=1 chr6 . exon 786931 788220 . - . ID=Thaps6132.1;Parent=Thaps6132;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 788968 789702 . + . ID=Thaps6133;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5N2];external_name=Thaps6133;logic_name=jgi_thaps3 chr6 ensembl transcript 788968 789702 . + . ID=Thaps6133;Parent=Thaps6133;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 788968 789702 . + 0 ID=Thaps6133;Parent=Thaps6133;rank=1 chr6 . exon 788968 789702 . + . ID=Thaps6133.1;Parent=Thaps6133;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 801808 803238 . - . ID=Thaps23086;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5N6];external_name=Thaps23086;logic_name=jgi_thaps3 chr6 ensembl transcript 801808 803238 . - . ID=Thaps23086;Parent=Thaps23086;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 801808 803238 . - 0 ID=Thaps23086;Parent=Thaps23086;rank=1 chr6 . exon 801808 803238 . - . ID=Thaps23086.1;Parent=Thaps23086;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 797710 801607 . + . ID=Thaps262824;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5N5];external_name=Thaps262824;logic_name=jgi_thaps3 chr6 ensembl transcript 797710 801607 . + . ID=Thaps262824;Parent=Thaps262824;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 797710 798266 . + 0 ID=Thaps262824;Parent=Thaps262824;rank=1 chr6 . exon 797710 798266 . + . ID=Thaps262824.1;Parent=Thaps262824;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 798354 798652 . + 0 ID=Thaps262824;Parent=Thaps262824;rank=2 chr6 . exon 798354 798652 . + . ID=Thaps262824.2;Parent=Thaps262824;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 798773 799120 . + 0 ID=Thaps262824;Parent=Thaps262824;rank=3 chr6 . exon 798773 799120 . + . ID=Thaps262824.3;Parent=Thaps262824;constitutive=1;rank=3 chr6 . CDS 799427 801607 . + 0 ID=Thaps262824;Parent=Thaps262824;rank=4 chr6 . exon 799427 801607 . + . ID=Thaps262824.4;Parent=Thaps262824;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 804394 804873 . + . ID=Thaps6138;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5N7];external_name=Thaps6138;logic_name=jgi_thaps3 chr6 ensembl transcript 804394 804873 . + . ID=Thaps6138;Parent=Thaps6138;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 804394 804873 . + 0 ID=Thaps6138;Parent=Thaps6138;rank=1 chr6 . exon 804394 804873 . + . ID=Thaps6138.1;Parent=Thaps6138;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 805433 806281 . - . ID=Thaps6139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5N8];external_name=Thaps6139;logic_name=jgi_thaps3 chr6 ensembl transcript 805433 806281 . - . ID=Thaps6139;Parent=Thaps6139;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 805433 805503 . - 0 ID=Thaps6139;Parent=Thaps6139;rank=3 chr6 . exon 805433 805503 . - . ID=Thaps6139.3;Parent=Thaps6139;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 805593 805698 . - 0 ID=Thaps6139;Parent=Thaps6139;rank=2 chr6 . exon 805593 805698 . - . ID=Thaps6139.2;Parent=Thaps6139;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 805811 806281 . - 0 ID=Thaps6139;Parent=Thaps6139;rank=1 chr6 . exon 805811 806281 . - . ID=Thaps6139.1;Parent=Thaps6139;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 806649 807121 . + . ID=Thaps6140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5N9];external_name=Thaps6140;logic_name=jgi_thaps3 chr6 ensembl transcript 806649 807121 . + . ID=Thaps6140;Parent=Thaps6140;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 806649 807053 . + 0 ID=Thaps6140;Parent=Thaps6140;rank=1 chr6 . exon 806649 807053 . + . ID=Thaps6140.1;Parent=Thaps6140;constitutive=1;rank=1 chr6 . CDS 807095 807121 . + 0 ID=Thaps6140;Parent=Thaps6140;rank=2 chr6 . repeat_region 807471 807478 . ? . description=dust chr6 . repeat_region 808215 808243 . ? . description=trf chr6 ensembl protein_coding_gene 811121 812372 . - . ID=Thaps262826;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5P0];external_name=Thaps262826;logic_name=jgi_thaps3 chr6 ensembl transcript 811121 812372 . - . ID=Thaps262826;Parent=Thaps262826;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 811121 811157 . - 0 ID=Thaps262826;Parent=Thaps262826;rank=3 chr6 . exon 811121 811157 . - . ID=Thaps262826.3;Parent=Thaps262826;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 811237 811818 . - 0 ID=Thaps262826;Parent=Thaps262826;rank=2 chr6 . exon 811237 811818 . - . ID=Thaps262826.2;Parent=Thaps262826;constitutive=1;rank=2 chr6 . CDS 811905 812372 . - 0 ID=Thaps262826;Parent=Thaps262826;rank=1 chr6 . exon 811905 812372 . - . ID=Thaps262826.1;Parent=Thaps262826;constitutive=1;rank=1 chr6 . exon 807095 807121 . + . ID=Thaps6140.2;Parent=Thaps6140;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 816934 818741 . + . ID=Thaps262827;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5P1];external_name=Thaps262827;logic_name=jgi_thaps3 chr6 ensembl transcript 816934 818741 . + . ID=Thaps262827;Parent=Thaps262827;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 816934 817503 . + 0 ID=Thaps262827;Parent=Thaps262827;rank=1 chr6 . exon 816934 817503 . + . ID=Thaps262827.1;Parent=Thaps262827;constitutive=1;rank=1 chr6 . CDS 817933 817970 . + 0 ID=Thaps262827;Parent=Thaps262827;rank=2 chr6 . exon 817933 817970 . + . ID=Thaps262827.2;Parent=Thaps262827;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 818039 818116 . + 0 ID=Thaps262827;Parent=Thaps262827;rank=3 chr6 . exon 818039 818116 . + . ID=Thaps262827.3;Parent=Thaps262827;constitutive=1;rank=3 chr6 . CDS 818188 818278 . + 0 ID=Thaps262827;Parent=Thaps262827;rank=4 chr6 . exon 818188 818278 . + . ID=Thaps262827.4;Parent=Thaps262827;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 818356 818536 . + 0 ID=Thaps262827;Parent=Thaps262827;rank=5 chr6 . exon 818356 818536 . + . ID=Thaps262827.5;Parent=Thaps262827;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 818625 818741 . + 0 ID=Thaps262827;Parent=Thaps262827;rank=6 chr6 . exon 818625 818741 . + . ID=Thaps262827.6;Parent=Thaps262827;constitutive=1;rank=6 chr6 ensembl protein_coding_gene 818838 819420 . + . ID=Thaps262828;biotype=protein_coding;description=Vascular plant-like receptor-like protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C5P2];external_name=Thaps262828;logic_name=jgi_thaps3 chr6 ensembl transcript 818838 819420 . + . ID=Thaps262828;Parent=Thaps262828;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 818838 819420 . + 0 ID=Thaps262828;Parent=Thaps262828;rank=1 chr6 . exon 818838 819420 . + . ID=Thaps262828.1;Parent=Thaps262828;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 819506 826848 . - . ID=Thaps6143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5P3];external_name=Thaps6143;logic_name=jgi_thaps3 chr6 ensembl transcript 819506 826848 . - . ID=Thaps6143;Parent=Thaps6143;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 819506 819928 . - 0 ID=Thaps6143;Parent=Thaps6143;rank=3 chr6 . exon 819506 819928 . - . ID=Thaps6143.3;Parent=Thaps6143;constitutive=1;rank=3 chr6 . CDS 819974 824101 . - 0 ID=Thaps6143;Parent=Thaps6143;rank=2 chr6 . exon 819974 824101 . - . ID=Thaps6143.2;Parent=Thaps6143;constitutive=1;rank=2 chr6 . CDS 824191 826848 . - 0 ID=Thaps6143;Parent=Thaps6143;rank=1 chr6 . exon 824191 826848 . - . ID=Thaps6143.1;Parent=Thaps6143;constitutive=1;rank=1 chr6 . repeat_region 834970 835023 . ? . description=dust chr6 . repeat_region 835000 835023 . ? . description=trf chr6 ensembl protein_coding_gene 827263 831407 . + . ID=Thaps269063;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5P4];external_name=Thaps269063;logic_name=jgi_thaps3 chr6 ensembl transcript 827263 831407 . + . ID=Thaps269063;Parent=Thaps269063;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 827263 827295 . + 0 ID=Thaps269063;Parent=Thaps269063;rank=1 chr6 . exon 827263 827295 . + . ID=Thaps269063.1;Parent=Thaps269063;constitutive=1;rank=1 chr6 . CDS 827386 827539 . + 0 ID=Thaps269063;Parent=Thaps269063;rank=2 chr6 . exon 827386 827539 . + . ID=Thaps269063.2;Parent=Thaps269063;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 827615 827651 . + 0 ID=Thaps269063;Parent=Thaps269063;rank=3 chr6 . exon 827615 827651 . + . ID=Thaps269063.3;Parent=Thaps269063;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 827732 828249 . + 0 ID=Thaps269063;Parent=Thaps269063;rank=4 chr6 . exon 827732 828249 . + . ID=Thaps269063.4;Parent=Thaps269063;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 829908 829940 . + 0 ID=Thaps269063;Parent=Thaps269063;rank=5 chr6 . exon 829908 829940 . + . ID=Thaps269063.5;Parent=Thaps269063;constitutive=1;rank=5 chr6 . CDS 830107 830499 . + 0 ID=Thaps269063;Parent=Thaps269063;rank=6 chr6 . exon 830107 830499 . + . ID=Thaps269063.6;Parent=Thaps269063;constitutive=1;rank=6 chr6 . CDS 830574 830960 . + 0 ID=Thaps269063;Parent=Thaps269063;rank=7 chr6 . exon 830574 830960 . + . ID=Thaps269063.7;Parent=Thaps269063;constitutive=1;rank=7 chr6 . CDS 831043 831407 . + 0 ID=Thaps269063;Parent=Thaps269063;rank=8 chr6 . exon 831043 831407 . + . ID=Thaps269063.8;Parent=Thaps269063;constitutive=1;ensembl_end_phase=2;rank=8 chr6 ensembl protein_coding_gene 831542 834013 . - . ID=Thaps269064;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5P5];external_name=Thaps269064;logic_name=jgi_thaps3 chr6 ensembl transcript 831542 834013 . - . ID=Thaps269064;Parent=Thaps269064;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 831542 831694 . - 0 ID=Thaps269064;Parent=Thaps269064;rank=5 chr6 . exon 831542 831694 . - . ID=Thaps269064.5;Parent=Thaps269064;constitutive=1;rank=5 chr6 . CDS 831833 832257 . - 0 ID=Thaps269064;Parent=Thaps269064;rank=4 chr6 . exon 831833 832257 . - . ID=Thaps269064.4;Parent=Thaps269064;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 832294 832828 . - 0 ID=Thaps269064;Parent=Thaps269064;rank=3 chr6 . exon 832294 832828 . - . ID=Thaps269064.3;Parent=Thaps269064;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 832865 833173 . - 0 ID=Thaps269064;Parent=Thaps269064;rank=2 chr6 . exon 832865 833173 . - . ID=Thaps269064.2;Parent=Thaps269064;constitutive=1;rank=2 chr6 . CDS 833216 834013 . - 0 ID=Thaps269064;Parent=Thaps269064;rank=1 chr6 . exon 833216 834013 . - . ID=Thaps269064.1;Parent=Thaps269064;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 835032 835772 . + . ID=Thaps269065;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5P6];external_name=Thaps269065;logic_name=jgi_thaps3 chr6 ensembl transcript 835032 835772 . + . ID=Thaps269065;Parent=Thaps269065;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 835032 835232 . + 0 ID=Thaps269065;Parent=Thaps269065;rank=1 chr6 . exon 835032 835232 . + . ID=Thaps269065.1;Parent=Thaps269065;constitutive=1;rank=1 chr6 . CDS 835302 835772 . + 0 ID=Thaps269065;Parent=Thaps269065;rank=2 chr6 . exon 835302 835772 . + . ID=Thaps269065.2;Parent=Thaps269065;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 836527 837805 . + . ID=Thaps269066;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5P7];external_name=Thaps269066;logic_name=jgi_thaps3 chr6 ensembl transcript 836527 837805 . + . ID=Thaps269066;Parent=Thaps269066;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 836527 837058 . + 0 ID=Thaps269066;Parent=Thaps269066;rank=1 chr6 . exon 836527 837058 . + . ID=Thaps269066.1;Parent=Thaps269066;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 837357 837805 . + 0 ID=Thaps269066;Parent=Thaps269066;rank=2 chr6 ensembl protein_coding_gene 841431 842459 . - . ID=Thaps16169;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q0];external_name=Thaps16169;logic_name=jgi_thaps3 chr6 ensembl transcript 841431 842459 . - . ID=Thaps16169;Parent=Thaps16169;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 841431 842459 . - 0 ID=Thaps16169;Parent=Thaps16169;rank=1 chr6 . exon 841431 842459 . - . ID=Thaps16169.1;Parent=Thaps16169;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 843536 844279 . - . ID=Thaps18109;biotype=protein_coding;description=Uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q1];external_name=Thaps18109;logic_name=jgi_thaps3 chr6 ensembl transcript 843536 844279 . - . ID=Thaps18109;Parent=Thaps18109;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 843536 843791 . - 0 ID=Thaps18109;Parent=Thaps18109;rank=2 chr6 . exon 843536 843791 . - . ID=Thaps18109.2;Parent=Thaps18109;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 843912 844279 . - 0 ID=Thaps18109;Parent=Thaps18109;rank=1 chr6 . exon 843912 844279 . - . ID=Thaps18109.1;Parent=Thaps18109;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 838039 840143 . + . ID=Thaps23092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5P8];external_name=Thaps23092;logic_name=jgi_thaps3 chr6 ensembl transcript 838039 840143 . + . ID=Thaps23092;Parent=Thaps23092;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 838039 838923 . + 0 ID=Thaps23092;Parent=Thaps23092;rank=1 chr6 . exon 838039 838923 . + . ID=Thaps23092.1;Parent=Thaps23092;constitutive=1;rank=1 chr6 . CDS 839000 839527 . + 0 ID=Thaps23092;Parent=Thaps23092;rank=2 chr6 . exon 839000 839527 . + . ID=Thaps23092.2;Parent=Thaps23092;constitutive=1;rank=2 chr6 . CDS 839610 839851 . + 0 ID=Thaps23092;Parent=Thaps23092;rank=3 chr6 . exon 839610 839851 . + . ID=Thaps23092.3;Parent=Thaps23092;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 839945 840143 . + 0 ID=Thaps23092;Parent=Thaps23092;rank=4 chr6 . exon 839945 840143 . + . ID=Thaps23092.4;Parent=Thaps23092;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . exon 837357 837805 . + . ID=Thaps269066.2;Parent=Thaps269066;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 840294 841250 . - . ID=Thaps41005;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5P9];external_name=Thaps41005;logic_name=jgi_thaps3 chr6 ensembl transcript 840294 841250 . - . ID=Thaps41005;Parent=Thaps41005;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 840294 841250 . - 0 ID=Thaps41005;Parent=Thaps41005;rank=1 chr6 . exon 840294 841250 . - . ID=Thaps41005.1;Parent=Thaps41005;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 845056 846441 . - . ID=Thaps6150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q2];external_name=Thaps6150;logic_name=jgi_thaps3 chr6 ensembl transcript 845056 846441 . - . ID=Thaps6150;Parent=Thaps6150;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 845056 846441 . - 0 ID=Thaps6150;Parent=Thaps6150;rank=1 chr6 . exon 845056 846441 . - . ID=Thaps6150.1;Parent=Thaps6150;constitutive=1;rank=1 chr6 . repeat_region 852035 852065 . ? . description=trf chr6 . repeat_region 852035 852065 . ? . description=dust chr6 . repeat_region 852184 852211 . ? . description=trf chr6 ensembl protein_coding_gene 848308 852503 . - . ID=Thaps23094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q4];external_name=Thaps23094;logic_name=jgi_thaps3 chr6 ensembl transcript 848308 852503 . - . ID=Thaps23094;Parent=Thaps23094;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 848308 848387 . - 0 ID=Thaps23094;Parent=Thaps23094;rank=3 chr6 . exon 848308 848387 . - . ID=Thaps23094.3;Parent=Thaps23094;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 848466 852185 . - 0 ID=Thaps23094;Parent=Thaps23094;rank=2 chr6 . exon 848466 852185 . - . ID=Thaps23094.2;Parent=Thaps23094;constitutive=1;rank=2 chr6 . CDS 852221 852503 . - 0 ID=Thaps23094;Parent=Thaps23094;rank=1 chr6 . exon 852221 852503 . - . ID=Thaps23094.1;Parent=Thaps23094;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 852870 853415 . + . ID=Thaps23095;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q5];external_name=Thaps23095;logic_name=jgi_thaps3 chr6 ensembl transcript 852870 853415 . + . ID=Thaps23095;Parent=Thaps23095;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 852870 853415 . + 0 ID=Thaps23095;Parent=Thaps23095;rank=1 chr6 . exon 852870 853415 . + . ID=Thaps23095.1;Parent=Thaps23095;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 855452 857381 . + . ID=Thaps23096;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q6];external_name=Thaps23096;logic_name=jgi_thaps3 chr6 ensembl transcript 855452 857381 . + . ID=Thaps23096;Parent=Thaps23096;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 855452 857020 . + 0 ID=Thaps23096;Parent=Thaps23096;rank=1 chr6 . exon 855452 857020 . + . ID=Thaps23096.1;Parent=Thaps23096;constitutive=1;rank=1 chr6 . CDS 857100 857381 . + 0 ID=Thaps23096;Parent=Thaps23096;rank=2 chr6 ensembl protein_coding_gene 846786 848177 . + . ID=Thaps6151;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q3];external_name=Thaps6151;logic_name=jgi_thaps3 chr6 ensembl transcript 846786 848177 . + . ID=Thaps6151;Parent=Thaps6151;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 846786 848177 . + 0 ID=Thaps6151;Parent=Thaps6151;rank=1 chr6 . exon 846786 848177 . + . ID=Thaps6151.1;Parent=Thaps6151;constitutive=1;rank=1 chr6 . exon 857100 857381 . + . ID=Thaps23096.2;Parent=Thaps23096;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 865453 867384 . + . ID=Thaps23101;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5R1];external_name=Thaps23101;logic_name=jgi_thaps3 chr6 ensembl transcript 865453 867384 . + . ID=Thaps23101;Parent=Thaps23101;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 865453 867384 . + 0 ID=Thaps23101;Parent=Thaps23101;rank=1 chr6 . exon 865453 867384 . + . ID=Thaps23101.1;Parent=Thaps23101;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 859117 860231 . - . ID=Thaps34595;biotype=protein_coding;description=Aspartate carbamoyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q8];external_name=PYR;logic_name=jgi_thaps3 chr6 ensembl transcript 859117 860231 . - . ID=Thaps34595;Parent=Thaps34595;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 859117 859308 . - 0 ID=Thaps34595;Parent=Thaps34595;rank=2 chr6 . exon 859117 859308 . - . ID=Thaps34595.2;Parent=Thaps34595;constitutive=1;rank=2 chr6 . CDS 859422 860231 . - 0 ID=Thaps34595;Parent=Thaps34595;rank=1 chr6 . exon 859422 860231 . - . ID=Thaps34595.1;Parent=Thaps34595;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 864123 864749 . + . ID=Thaps35041;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5R0];external_name=Thaps35041;logic_name=jgi_thaps3 chr6 ensembl transcript 864123 864749 . + . ID=Thaps35041;Parent=Thaps35041;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 864123 864749 . + 0 ID=Thaps35041;Parent=Thaps35041;rank=1 chr6 . exon 864123 864749 . + . ID=Thaps35041.1;Parent=Thaps35041;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 862744 863658 . + . ID=Thaps41014;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q9];external_name=Thaps41014;logic_name=jgi_thaps3 chr6 ensembl transcript 862744 863658 . + . ID=Thaps41014;Parent=Thaps41014;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 862744 862903 . + 0 ID=Thaps41014;Parent=Thaps41014;rank=1 chr6 . exon 862744 862903 . + . ID=Thaps41014.1;Parent=Thaps41014;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 862988 863658 . + 0 ID=Thaps41014;Parent=Thaps41014;rank=2 chr6 . exon 862988 863658 . + . ID=Thaps41014.2;Parent=Thaps41014;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 858148 858863 . + . ID=Thaps6155;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Q7];external_name=Thaps6155;logic_name=jgi_thaps3 chr6 ensembl transcript 858148 858863 . + . ID=Thaps6155;Parent=Thaps6155;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 858148 858290 . + 0 ID=Thaps6155;Parent=Thaps6155;rank=1 chr6 . exon 858148 858290 . + . ID=Thaps6155.1;Parent=Thaps6155;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 858426 858617 . + 0 ID=Thaps6155;Parent=Thaps6155;rank=2 chr6 . exon 858426 858617 . + . ID=Thaps6155.2;Parent=Thaps6155;constitutive=1;rank=2 chr6 . CDS 858713 858863 . + 0 ID=Thaps6155;Parent=Thaps6155;rank=3 chr6 . exon 858713 858863 . + . ID=Thaps6155.3;Parent=Thaps6155;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 867878 869844 . + . ID=Thaps23102;biotype=protein_coding;description=T-complex chaperonin protein%2C epsilon subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C5R2];external_name=Thaps23102;logic_name=jgi_thaps3 chr6 ensembl transcript 867878 869844 . + . ID=Thaps23102;Parent=Thaps23102;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 867878 867893 . + 0 ID=Thaps23102;Parent=Thaps23102;rank=1 chr6 . exon 867878 867893 . + . ID=Thaps23102.1;Parent=Thaps23102;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 868134 868210 . + 0 ID=Thaps23102;Parent=Thaps23102;rank=2 chr6 . exon 868134 868210 . + . ID=Thaps23102.2;Parent=Thaps23102;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 868306 869844 . + 0 ID=Thaps23102;Parent=Thaps23102;rank=3 chr6 . exon 868306 869844 . + . ID=Thaps23102.3;Parent=Thaps23102;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 870540 873061 . + . ID=Thaps269076;biotype=protein_coding;description=Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8C5R3];external_name=Thaps269076;logic_name=jgi_thaps3 chr6 ensembl transcript 870540 873061 . + . ID=Thaps269076;Parent=Thaps269076;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 870540 870890 . + 0 ID=Thaps269076;Parent=Thaps269076;rank=1 chr6 . exon 870540 870890 . + . ID=Thaps269076.1;Parent=Thaps269076;constitutive=1;rank=1 chr6 . CDS 870971 871254 . + 0 ID=Thaps269076;Parent=Thaps269076;rank=2 chr6 . exon 870971 871254 . + . ID=Thaps269076.2;Parent=Thaps269076;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 871333 871825 . + 0 ID=Thaps269076;Parent=Thaps269076;rank=3 chr6 . exon 871333 871825 . + . ID=Thaps269076.3;Parent=Thaps269076;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 871868 873061 . + 0 ID=Thaps269076;Parent=Thaps269076;rank=4 chr6 . exon 871868 873061 . + . ID=Thaps269076.4;Parent=Thaps269076;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 873256 873669 . - . ID=Thaps6164;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5R4];external_name=Thaps6164;logic_name=jgi_thaps3 chr6 ensembl transcript 873256 873669 . - . ID=Thaps6164;Parent=Thaps6164;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 873256 873669 . - 0 ID=Thaps6164;Parent=Thaps6164;rank=1 chr6 . exon 873256 873669 . - . ID=Thaps6164.1;Parent=Thaps6164;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 874368 876278 . + . ID=Thaps6165;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5R5];external_name=Thaps6165;logic_name=jgi_thaps3 chr6 ensembl transcript 874368 876278 . + . ID=Thaps6165;Parent=Thaps6165;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 874368 874680 . + 0 ID=Thaps6165;Parent=Thaps6165;rank=1 chr6 . exon 874368 874680 . + . ID=Thaps6165.1;Parent=Thaps6165;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 874765 876278 . + 0 ID=Thaps6165;Parent=Thaps6165;rank=2 chr6 . exon 874765 876278 . + . ID=Thaps6165.2;Parent=Thaps6165;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . repeat_region 880708 880726 . ? . description=dust chr6 ensembl protein_coding_gene 885158 891760 . + . ID=Thaps23105;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5R9];external_name=Thaps23105;logic_name=jgi_thaps3 chr6 ensembl transcript 885158 891760 . + . ID=Thaps23105;Parent=Thaps23105;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 885158 888220 . + 0 ID=Thaps23105;Parent=Thaps23105;rank=1 chr6 . exon 885158 888220 . + . ID=Thaps23105.1;Parent=Thaps23105;constitutive=1;rank=1 chr6 . CDS 888306 888836 . + 0 ID=Thaps23105;Parent=Thaps23105;rank=2 chr6 . CDS 888923 889477 . + 0 ID=Thaps23105;Parent=Thaps23105;rank=3 chr6 . CDS 889533 889801 . + 0 ID=Thaps23105;Parent=Thaps23105;rank=4 chr6 . CDS 890021 891602 . + 0 ID=Thaps23105;Parent=Thaps23105;rank=5 chr6 . CDS 891725 891760 . + 0 ID=Thaps23105;Parent=Thaps23105;rank=6 chr6 ensembl protein_coding_gene 876542 876935 . + . ID=Thaps262844;biotype=protein_coding;description=Heat shock protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5R6];external_name=Thaps262844;logic_name=jgi_thaps3 chr6 ensembl transcript 876542 876935 . + . ID=Thaps262844;Parent=Thaps262844;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 876542 876806 . + 0 ID=Thaps262844;Parent=Thaps262844;rank=1 chr6 . exon 876542 876806 . + . ID=Thaps262844.1;Parent=Thaps262844;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 876880 876935 . + 0 ID=Thaps262844;Parent=Thaps262844;rank=2 chr6 . exon 876880 876935 . + . ID=Thaps262844.2;Parent=Thaps262844;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 881791 883234 . + . ID=Thaps34795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5R8];external_name=Thaps34795;logic_name=jgi_thaps3 chr6 ensembl transcript 881791 883234 . + . ID=Thaps34795;Parent=Thaps34795;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 881791 881992 . + 0 ID=Thaps34795;Parent=Thaps34795;rank=1 chr6 . exon 881791 881992 . + . ID=Thaps34795.1;Parent=Thaps34795;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 882089 882226 . + 0 ID=Thaps34795;Parent=Thaps34795;rank=2 chr6 . exon 882089 882226 . + . ID=Thaps34795.2;Parent=Thaps34795;constitutive=1;rank=2 chr6 . CDS 882327 883234 . + 0 ID=Thaps34795;Parent=Thaps34795;rank=3 chr6 . exon 882327 883234 . + . ID=Thaps34795.3;Parent=Thaps34795;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 878885 881176 . - . ID=Thaps6167;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5R7];external_name=Thaps6167;logic_name=jgi_thaps3 chr6 ensembl transcript 878885 881176 . - . ID=Thaps6167;Parent=Thaps6167;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 878885 881176 . - 0 ID=Thaps6167;Parent=Thaps6167;rank=1 chr6 . exon 878885 881176 . - . ID=Thaps6167.1;Parent=Thaps6167;constitutive=1;rank=1 chr6 . repeat_region 892246 892398 . ? . description=trf chr6 . exon 888306 888836 . + . ID=Thaps23105.2;Parent=Thaps23105;constitutive=1;rank=2 chr6 . exon 888923 889477 . + . ID=Thaps23105.3;Parent=Thaps23105;constitutive=1;rank=3 chr6 . exon 889533 889801 . + . ID=Thaps23105.4;Parent=Thaps23105;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . exon 890021 891602 . + . ID=Thaps23105.5;Parent=Thaps23105;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . exon 891725 891760 . + . ID=Thaps23105.6;Parent=Thaps23105;constitutive=1;rank=6 chr6 ensembl protein_coding_gene 893832 896496 . + . ID=Thaps23106;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5S1];external_name=Thaps23106;logic_name=jgi_thaps3 chr6 ensembl transcript 893832 896496 . + . ID=Thaps23106;Parent=Thaps23106;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 893832 893853 . + 0 ID=Thaps23106;Parent=Thaps23106;rank=1 chr6 . exon 893832 893853 . + . ID=Thaps23106.1;Parent=Thaps23106;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 893957 894155 . + 0 ID=Thaps23106;Parent=Thaps23106;rank=2 chr6 . exon 893957 894155 . + . ID=Thaps23106.2;Parent=Thaps23106;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 894223 896138 . + 0 ID=Thaps23106;Parent=Thaps23106;rank=3 chr6 . exon 894223 896138 . + . ID=Thaps23106.3;Parent=Thaps23106;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 896237 896496 . + 0 ID=Thaps23106;Parent=Thaps23106;rank=4 chr6 . exon 896237 896496 . + . ID=Thaps23106.4;Parent=Thaps23106;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 891981 893475 . - . ID=Thaps6170;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5S0];external_name=Thaps6170;logic_name=jgi_thaps3 chr6 ensembl transcript 891981 893475 . - . ID=Thaps6170;Parent=Thaps6170;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 891981 892576 . - 0 ID=Thaps6170;Parent=Thaps6170;rank=3 chr6 . exon 891981 892576 . - . ID=Thaps6170.3;Parent=Thaps6170;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 892710 892784 . - 0 ID=Thaps6170;Parent=Thaps6170;rank=2 chr6 . exon 892710 892784 . - . ID=Thaps6170.2;Parent=Thaps6170;constitutive=1;rank=2 chr6 . CDS 892830 893475 . - 0 ID=Thaps6170;Parent=Thaps6170;rank=1 chr6 . exon 892830 893475 . - . ID=Thaps6170.1;Parent=Thaps6170;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 903584 903591 . ? . description=dust chr6 . repeat_region 905607 905666 . ? . description=dust chr6 ensembl protein_coding_gene 903786 905318 . - . ID=Thaps23108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5S7];external_name=Thaps23108;logic_name=jgi_thaps3 chr6 ensembl transcript 903786 905318 . - . ID=Thaps23108;Parent=Thaps23108;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 903786 905318 . - 0 ID=Thaps23108;Parent=Thaps23108;rank=1 chr6 . exon 903786 905318 . - . ID=Thaps23108.1;Parent=Thaps23108;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 900650 901724 . + . ID=Thaps262849;biotype=protein_coding;description=Chromate transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C5S5];external_name=Thaps262849;logic_name=jgi_thaps3 chr6 ensembl transcript 900650 901724 . + . ID=Thaps262849;Parent=Thaps262849;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 900650 901079 . + 0 ID=Thaps262849;Parent=Thaps262849;rank=1 chr6 . exon 900650 901079 . + . ID=Thaps262849.1;Parent=Thaps262849;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 901155 901724 . + 0 ID=Thaps262849;Parent=Thaps262849;rank=2 chr6 . exon 901155 901724 . + . ID=Thaps262849.2;Parent=Thaps262849;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 896688 898040 . - . ID=Thaps41025;biotype=protein_coding;description=Histone deacetylase [Source:UniProtKB/TrEMBL%3BAcc:B8C5S2];external_name=Thaps41025;logic_name=jgi_thaps3 chr6 ensembl transcript 896688 898040 . - . ID=Thaps41025;Parent=Thaps41025;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 896688 898040 . - 0 ID=Thaps41025;Parent=Thaps41025;rank=1 chr6 . exon 896688 898040 . - . ID=Thaps41025.1;Parent=Thaps41025;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 898363 898958 . + . ID=Thaps6173;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5S3];external_name=Thaps6173;logic_name=jgi_thaps3 chr6 ensembl transcript 898363 898958 . + . ID=Thaps6173;Parent=Thaps6173;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 898363 898447 . + 0 ID=Thaps6173;Parent=Thaps6173;rank=1 chr6 . exon 898363 898447 . + . ID=Thaps6173.1;Parent=Thaps6173;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 898545 898633 . + 0 ID=Thaps6173;Parent=Thaps6173;rank=2 chr6 . exon 898545 898633 . + . ID=Thaps6173.2;Parent=Thaps6173;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 898722 898958 . + 0 ID=Thaps6173;Parent=Thaps6173;rank=3 chr6 . exon 898722 898958 . + . ID=Thaps6173.3;Parent=Thaps6173;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 899359 900351 . - . ID=Thaps6174;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5S4];external_name=Thaps6174;logic_name=jgi_thaps3 chr6 ensembl transcript 899359 900351 . - . ID=Thaps6174;Parent=Thaps6174;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 899359 899837 . - 0 ID=Thaps6174;Parent=Thaps6174;rank=2 chr6 . exon 899359 899837 . - . ID=Thaps6174.2;Parent=Thaps6174;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 900015 900351 . - 0 ID=Thaps6174;Parent=Thaps6174;rank=1 chr6 . exon 900015 900351 . - . ID=Thaps6174.1;Parent=Thaps6174;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 902096 903259 . - . ID=Thaps6176;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5S6];external_name=Thaps6176;logic_name=jgi_thaps3 chr6 ensembl transcript 902096 903259 . - . ID=Thaps6176;Parent=Thaps6176;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 902096 902118 . - 0 ID=Thaps6176;Parent=Thaps6176;rank=3 chr6 . exon 902096 902118 . - . ID=Thaps6176.3;Parent=Thaps6176;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 902148 902288 . - 0 ID=Thaps6176;Parent=Thaps6176;rank=2 chr6 . exon 902148 902288 . - . ID=Thaps6176.2;Parent=Thaps6176;constitutive=1;rank=2 chr6 . CDS 902341 903259 . - 0 ID=Thaps6176;Parent=Thaps6176;rank=1 chr6 . exon 902341 903259 . - . ID=Thaps6176.1;Parent=Thaps6176;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 905916 908086 . - . ID=Thaps6178;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5S8];external_name=Thaps6178;logic_name=jgi_thaps3 chr6 ensembl transcript 905916 908086 . - . ID=Thaps6178;Parent=Thaps6178;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 905916 906352 . - 0 ID=Thaps6178;Parent=Thaps6178;rank=3 chr6 . exon 905916 906352 . - . ID=Thaps6178.3;Parent=Thaps6178;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 906413 907099 . - 0 ID=Thaps6178;Parent=Thaps6178;rank=2 chr6 . CDS 907171 908086 . - 0 ID=Thaps6178;Parent=Thaps6178;rank=1 chr6 . repeat_region 912714 912782 . ? . description=trf chr6 ensembl protein_coding_gene 913683 915146 . - . ID=Thaps23111;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5T0];external_name=Thaps23111;logic_name=jgi_thaps3 chr6 ensembl transcript 913683 915146 . - . ID=Thaps23111;Parent=Thaps23111;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 913683 914447 . - 0 ID=Thaps23111;Parent=Thaps23111;rank=3 chr6 . exon 913683 914447 . - . ID=Thaps23111.3;Parent=Thaps23111;constitutive=1;rank=3 chr6 . CDS 914556 914985 . - 0 ID=Thaps23111;Parent=Thaps23111;rank=2 chr6 . exon 914556 914985 . - . ID=Thaps23111.2;Parent=Thaps23111;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 915061 915146 . - 0 ID=Thaps23111;Parent=Thaps23111;rank=1 chr6 . exon 915061 915146 . - . ID=Thaps23111.1;Parent=Thaps23111;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 908442 910527 . + . ID=Thaps269080;biotype=protein_coding;description=Ctp-synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C5S9];external_name=Thaps269080;logic_name=jgi_thaps3 chr6 ensembl transcript 908442 910527 . + . ID=Thaps269080;Parent=Thaps269080;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 908442 909089 . + 0 ID=Thaps269080;Parent=Thaps269080;rank=1 chr6 . exon 908442 909089 . + . ID=Thaps269080.1;Parent=Thaps269080;constitutive=1;rank=1 chr6 . CDS 909135 909558 . + 0 ID=Thaps269080;Parent=Thaps269080;rank=2 chr6 . exon 909135 909558 . + . ID=Thaps269080.2;Parent=Thaps269080;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 909610 909708 . + 0 ID=Thaps269080;Parent=Thaps269080;rank=3 chr6 . exon 909610 909708 . + . ID=Thaps269080.3;Parent=Thaps269080;constitutive=1;rank=3 chr6 . CDS 909785 910527 . + 0 ID=Thaps269080;Parent=Thaps269080;rank=4 chr6 . exon 909785 910527 . + . ID=Thaps269080.4;Parent=Thaps269080;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . exon 906413 907099 . - . ID=Thaps6178.2;Parent=Thaps6178;constitutive=1;rank=2 chr6 . exon 907171 908086 . - . ID=Thaps6178.1;Parent=Thaps6178;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 915690 916028 . + . ID=Thaps6182;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5T1];external_name=Thaps6182;logic_name=jgi_thaps3 chr6 ensembl transcript 915690 916028 . + . ID=Thaps6182;Parent=Thaps6182;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 915690 916028 . + 0 ID=Thaps6182;Parent=Thaps6182;rank=1 chr6 . exon 915690 916028 . + . ID=Thaps6182.1;Parent=Thaps6182;constitutive=1;rank=1 chr6 . repeat_region 925359 925381 . ? . description=dust chr6 ensembl protein_coding_gene 919884 921192 . - . ID=Thaps262854;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5T3];external_name=Thaps262854;logic_name=jgi_thaps3 chr6 ensembl transcript 919884 921192 . - . ID=Thaps262854;Parent=Thaps262854;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 919884 920293 . - 0 ID=Thaps262854;Parent=Thaps262854;rank=2 chr6 . exon 919884 920293 . - . ID=Thaps262854.2;Parent=Thaps262854;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 920765 921192 . - 0 ID=Thaps262854;Parent=Thaps262854;rank=1 chr6 . exon 920765 921192 . - . ID=Thaps262854.1;Parent=Thaps262854;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 923090 925613 . - . ID=Thaps35059;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5T4];external_name=Thaps35059;logic_name=jgi_thaps3 chr6 ensembl transcript 923090 925613 . - . ID=Thaps35059;Parent=Thaps35059;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 923090 923361 . - 0 ID=Thaps35059;Parent=Thaps35059;rank=5 chr6 . exon 923090 923361 . - . ID=Thaps35059.5;Parent=Thaps35059;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 923444 923801 . - 0 ID=Thaps35059;Parent=Thaps35059;rank=4 chr6 . exon 923444 923801 . - . ID=Thaps35059.4;Parent=Thaps35059;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 923886 925160 . - 0 ID=Thaps35059;Parent=Thaps35059;rank=3 chr6 . exon 923886 925160 . - . ID=Thaps35059.3;Parent=Thaps35059;constitutive=1;rank=3 chr6 . CDS 925269 925332 . - 0 ID=Thaps35059;Parent=Thaps35059;rank=2 chr6 . exon 925269 925332 . - . ID=Thaps35059.2;Parent=Thaps35059;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 925414 925613 . - 0 ID=Thaps35059;Parent=Thaps35059;rank=1 chr6 . exon 925414 925613 . - . ID=Thaps35059.1;Parent=Thaps35059;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 918313 919206 . - . ID=Thaps35197;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5T2];external_name=Thaps35197;logic_name=jgi_thaps3 chr6 ensembl transcript 918313 919206 . - . ID=Thaps35197;Parent=Thaps35197;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 918313 919206 . - 0 ID=Thaps35197;Parent=Thaps35197;rank=1 chr6 . exon 918313 919206 . - . ID=Thaps35197.1;Parent=Thaps35197;constitutive=1;rank=1 chr6 . repeat_region 926741 926782 . ? . description=trf chr6 ensembl protein_coding_gene 928892 930517 . + . ID=Thaps262855;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5T5];external_name=Thaps262855;logic_name=jgi_thaps3 chr6 ensembl transcript 928892 930517 . + . ID=Thaps262855;Parent=Thaps262855;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 928892 930308 . + 0 ID=Thaps262855;Parent=Thaps262855;rank=1 chr6 . exon 928892 930308 . + . ID=Thaps262855.1;Parent=Thaps262855;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 930390 930517 . + 0 ID=Thaps262855;Parent=Thaps262855;rank=2 chr6 . exon 930390 930517 . + . ID=Thaps262855.2;Parent=Thaps262855;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 930894 931790 . - . ID=Thaps35025;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5T6];external_name=Thaps35025;logic_name=jgi_thaps3 chr6 ensembl transcript 930894 931790 . - . ID=Thaps35025;Parent=Thaps35025;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 930894 931790 . - 0 ID=Thaps35025;Parent=Thaps35025;rank=1 chr6 . exon 930894 931790 . - . ID=Thaps35025.1;Parent=Thaps35025;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 933769 935451 . - . ID=Thaps6186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5T7];external_name=Thaps6186;logic_name=jgi_thaps3 chr6 ensembl transcript 933769 935451 . - . ID=Thaps6186;Parent=Thaps6186;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 933769 935451 . - 0 ID=Thaps6186;Parent=Thaps6186;rank=1 chr6 . exon 933769 935451 . - . ID=Thaps6186.1;Parent=Thaps6186;constitutive=1;rank=1 chr6 . repeat_region 937737 937769 . ? . description=dust chr6 ensembl protein_coding_gene 938064 940019 . + . ID=Thaps23113;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5T9];external_name=Thaps23113;logic_name=jgi_thaps3 chr6 ensembl transcript 938064 940019 . + . ID=Thaps23113;Parent=Thaps23113;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 938064 940019 . + 0 ID=Thaps23113;Parent=Thaps23113;rank=1 chr6 . exon 938064 940019 . + . ID=Thaps23113.1;Parent=Thaps23113;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 936371 937099 . - . ID=Thaps262856;biotype=protein_coding;description=Trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C5T8];external_name=Thaps262856;logic_name=jgi_thaps3 chr6 ensembl transcript 936371 937099 . - . ID=Thaps262856;Parent=Thaps262856;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 936371 936585 . - 0 ID=Thaps262856;Parent=Thaps262856;rank=2 chr6 . exon 936371 936585 . - . ID=Thaps262856.2;Parent=Thaps262856;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 936613 937099 . - 0 ID=Thaps262856;Parent=Thaps262856;rank=1 chr6 . exon 936613 937099 . - . ID=Thaps262856.1;Parent=Thaps262856;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 940904 944111 . - . ID=Thaps262858;biotype=protein_coding;description=IKI3%2C-like protein to yeast IKI3 [Source:UniProtKB/TrEMBL%3BAcc:B8C5U0];external_name=IKI3;logic_name=jgi_thaps3 chr6 ensembl transcript 940904 944111 . - . ID=Thaps262858;Parent=Thaps262858;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 940904 941375 . - 0 ID=Thaps262858;Parent=Thaps262858;rank=9 chr6 . exon 940904 941375 . - . ID=Thaps262858.9;Parent=Thaps262858;constitutive=1;ensembl_end_phase=1;rank=9 chr6 . CDS 941403 941661 . - 0 ID=Thaps262858;Parent=Thaps262858;rank=8 chr6 . exon 941403 941661 . - . ID=Thaps262858.8;Parent=Thaps262858;constitutive=1;ensembl_end_phase=1;rank=8 chr6 . CDS 941704 942688 . - 0 ID=Thaps262858;Parent=Thaps262858;rank=7 chr6 . exon 941704 942688 . - . ID=Thaps262858.7;Parent=Thaps262858;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . CDS 942827 943066 . - 0 ID=Thaps262858;Parent=Thaps262858;rank=6 chr6 . exon 942827 943066 . - . ID=Thaps262858.6;Parent=Thaps262858;constitutive=1;rank=6 chr6 . CDS 943109 943376 . - 0 ID=Thaps262858;Parent=Thaps262858;rank=5 chr6 . exon 943109 943376 . - . ID=Thaps262858.5;Parent=Thaps262858;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 943437 943577 . - 0 ID=Thaps262858;Parent=Thaps262858;rank=4 chr6 . exon 943437 943577 . - . ID=Thaps262858.4;Parent=Thaps262858;constitutive=1;rank=4 chr6 . CDS 943596 943779 . - 0 ID=Thaps262858;Parent=Thaps262858;rank=3 chr6 . exon 943596 943779 . - . ID=Thaps262858.3;Parent=Thaps262858;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 943798 943875 . - 0 ID=Thaps262858;Parent=Thaps262858;rank=2 chr6 . exon 943798 943875 . - . ID=Thaps262858.2;Parent=Thaps262858;constitutive=1;rank=2 chr6 . CDS 943903 944111 . - 0 ID=Thaps262858;Parent=Thaps262858;rank=1 chr6 . exon 943903 944111 . - . ID=Thaps262858.1;Parent=Thaps262858;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 945261 946604 . + . ID=Thaps6190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5U1];external_name=Thaps6190;logic_name=jgi_thaps3 chr6 ensembl transcript 945261 946604 . + . ID=Thaps6190;Parent=Thaps6190;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 945261 946604 . + 0 ID=Thaps6190;Parent=Thaps6190;rank=1 chr6 . exon 945261 946604 . + . ID=Thaps6190.1;Parent=Thaps6190;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 955090 956072 . - . ID=Thaps262860;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5U3];external_name=Thaps262860;logic_name=jgi_thaps3 chr6 ensembl transcript 955090 956072 . - . ID=Thaps262860;Parent=Thaps262860;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 955090 955285 . - 0 ID=Thaps262860;Parent=Thaps262860;rank=5 chr6 . exon 955090 955285 . - . ID=Thaps262860.5;Parent=Thaps262860;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 955352 955473 . - 0 ID=Thaps262860;Parent=Thaps262860;rank=4 chr6 . exon 955352 955473 . - . ID=Thaps262860.4;Parent=Thaps262860;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 955507 955731 . - 0 ID=Thaps262860;Parent=Thaps262860;rank=3 chr6 . exon 955507 955731 . - . ID=Thaps262860.3;Parent=Thaps262860;constitutive=1;rank=3 chr6 . CDS 955819 955864 . - 0 ID=Thaps262860;Parent=Thaps262860;rank=2 chr6 . exon 955819 955864 . - . ID=Thaps262860.2;Parent=Thaps262860;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 955943 956072 . - 0 ID=Thaps262860;Parent=Thaps262860;rank=1 chr6 . exon 955943 956072 . - . ID=Thaps262860.1;Parent=Thaps262860;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 947170 950751 . + . ID=Thaps35189;biotype=protein_coding;description=DNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8C5U2];external_name=DPO1;logic_name=jgi_thaps3 chr6 ensembl transcript 947170 950751 . + . ID=Thaps35189;Parent=Thaps35189;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 947170 947276 . + 0 ID=Thaps35189;Parent=Thaps35189;rank=1 chr6 . exon 947170 947276 . + . ID=Thaps35189.1;Parent=Thaps35189;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 947337 947754 . + 0 ID=Thaps35189;Parent=Thaps35189;rank=2 chr6 . exon 947337 947754 . + . ID=Thaps35189.2;Parent=Thaps35189;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 947847 948047 . + 0 ID=Thaps35189;Parent=Thaps35189;rank=3 chr6 . exon 947847 948047 . + . ID=Thaps35189.3;Parent=Thaps35189;constitutive=1;rank=3 chr6 . CDS 948137 948277 . + 0 ID=Thaps35189;Parent=Thaps35189;rank=4 chr6 . exon 948137 948277 . + . ID=Thaps35189.4;Parent=Thaps35189;constitutive=1;rank=4 chr6 . CDS 948356 949162 . + 0 ID=Thaps35189;Parent=Thaps35189;rank=5 chr6 . exon 948356 949162 . + . ID=Thaps35189.5;Parent=Thaps35189;constitutive=1;rank=5 chr6 . CDS 949242 949646 . + 0 ID=Thaps35189;Parent=Thaps35189;rank=6 chr6 . exon 949242 949646 . + . ID=Thaps35189.6;Parent=Thaps35189;constitutive=1;rank=6 chr6 . CDS 949722 949986 . + 0 ID=Thaps35189;Parent=Thaps35189;rank=7 chr6 . exon 949722 949986 . + . ID=Thaps35189.7;Parent=Thaps35189;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . CDS 950096 950751 . + 0 ID=Thaps35189;Parent=Thaps35189;rank=8 chr6 . exon 950096 950751 . + . ID=Thaps35189.8;Parent=Thaps35189;constitutive=1;ensembl_end_phase=2;rank=8 chr6 . repeat_region 961545 961552 . ? . description=dust chr6 . repeat_region 963503 963526 . ? . description=trf chr6 . repeat_region 963503 963526 . ? . description=dust chr6 . repeat_region 965325 966320 . - . description=Gypsy1I_TP chr6 ensembl protein_coding_gene 962715 964728 . + . ID=Thaps23115;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5U5];external_name=Thaps23115;logic_name=jgi_thaps3 chr6 ensembl transcript 962715 964728 . + . ID=Thaps23115;Parent=Thaps23115;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 962715 962898 . + 0 ID=Thaps23115;Parent=Thaps23115;rank=1 chr6 . exon 962715 962898 . + . ID=Thaps23115.1;Parent=Thaps23115;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 963106 964092 . + 0 ID=Thaps23115;Parent=Thaps23115;rank=2 chr6 . exon 963106 964092 . + . ID=Thaps23115.2;Parent=Thaps23115;constitutive=1;rank=2 chr6 . CDS 964229 964728 . + 0 ID=Thaps23115;Parent=Thaps23115;rank=3 chr6 . exon 964229 964728 . + . ID=Thaps23115.3;Parent=Thaps23115;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 958496 961308 . - . ID=Thaps6192;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5U4];external_name=Thaps6192;logic_name=jgi_thaps3 chr6 ensembl transcript 958496 961308 . - . ID=Thaps6192;Parent=Thaps6192;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 958496 961308 . - 0 ID=Thaps6192;Parent=Thaps6192;rank=1 chr6 . exon 958496 961308 . - . ID=Thaps6192.1;Parent=Thaps6192;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 966321 966510 . - . description=Gypsy1ALTR_TP chr6 ensembl protein_coding_gene 966616 968601 . + . ID=Thaps23116;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5U6];external_name=Thaps23116;logic_name=jgi_thaps3 chr6 ensembl transcript 966616 968601 . + . ID=Thaps23116;Parent=Thaps23116;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 966616 968601 . + 0 ID=Thaps23116;Parent=Thaps23116;rank=1 chr6 . exon 966616 968601 . + . ID=Thaps23116.1;Parent=Thaps23116;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 968771 969689 . - . ID=Thaps262862;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5U7];external_name=Thaps262862;logic_name=jgi_thaps3 chr6 ensembl transcript 968771 969689 . - . ID=Thaps262862;Parent=Thaps262862;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 968771 969442 . - 0 ID=Thaps262862;Parent=Thaps262862;rank=2 chr6 . exon 968771 969442 . - . ID=Thaps262862.2;Parent=Thaps262862;constitutive=1;rank=2 chr6 . CDS 969512 969689 . - 0 ID=Thaps262862;Parent=Thaps262862;rank=1 chr6 . exon 969512 969689 . - . ID=Thaps262862.1;Parent=Thaps262862;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 970152 971696 . - . ID=Thaps262863;biotype=protein_coding;description=Sorting nexin [Source:UniProtKB/TrEMBL%3BAcc:B8C5U8];external_name=Thaps262863;logic_name=jgi_thaps3 chr6 ensembl transcript 970152 971696 . - . ID=Thaps262863;Parent=Thaps262863;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 970152 971149 . - 0 ID=Thaps262863;Parent=Thaps262863;rank=2 chr6 . exon 970152 971149 . - . ID=Thaps262863.2;Parent=Thaps262863;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 971258 971696 . - 0 ID=Thaps262863;Parent=Thaps262863;rank=1 chr6 . exon 971258 971696 . - . ID=Thaps262863.1;Parent=Thaps262863;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 975188 975863 . + . ID=Thaps269086;biotype=protein_coding;description=RS24%2C ribosomal protein 24 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C5V1];external_name=RS24;logic_name=jgi_thaps3 chr6 ensembl transcript 975188 975863 . + . ID=Thaps269086;Parent=Thaps269086;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 975188 975256 . + 0 ID=Thaps269086;Parent=Thaps269086;rank=1 chr6 . exon 975188 975256 . + . ID=Thaps269086.1;Parent=Thaps269086;constitutive=1;rank=1 chr6 . CDS 975519 975863 . + 0 ID=Thaps269086;Parent=Thaps269086;rank=2 chr6 . exon 975519 975863 . + . ID=Thaps269086.2;Parent=Thaps269086;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 972270 973287 . - . ID=Thaps35108;biotype=protein_coding;description=AAA domain protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5U9];external_name=Thaps35108;logic_name=jgi_thaps3 chr6 ensembl transcript 972270 973287 . - . ID=Thaps35108;Parent=Thaps35108;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 972270 972964 . - 0 ID=Thaps35108;Parent=Thaps35108;rank=2 chr6 . exon 972270 972964 . - . ID=Thaps35108.2;Parent=Thaps35108;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 973062 973287 . - 0 ID=Thaps35108;Parent=Thaps35108;rank=1 chr6 . exon 973062 973287 . - . ID=Thaps35108.1;Parent=Thaps35108;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 973481 974988 . - . ID=Thaps6198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5V0];external_name=Thaps6198;logic_name=jgi_thaps3 chr6 ensembl transcript 973481 974988 . - . ID=Thaps6198;Parent=Thaps6198;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 973481 974988 . - 0 ID=Thaps6198;Parent=Thaps6198;rank=1 chr6 . exon 973481 974988 . - . ID=Thaps6198.1;Parent=Thaps6198;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 977613 978602 . + . ID=Thaps34585;biotype=protein_coding;description=Biotin synthase%2C BioB [Source:UniProtKB/TrEMBL%3BAcc:B8C5V3];external_name=Thaps34585;logic_name=jgi_thaps3 chr6 ensembl transcript 977613 978602 . + . ID=Thaps34585;Parent=Thaps34585;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 977613 978602 . + 0 ID=Thaps34585;Parent=Thaps34585;rank=1 chr6 . exon 977613 978602 . + . ID=Thaps34585.1;Parent=Thaps34585;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 978804 979529 . - . ID=Thaps34698;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5V4];external_name=Thaps34698;logic_name=jgi_thaps3 chr6 ensembl transcript 978804 979529 . - . ID=Thaps34698;Parent=Thaps34698;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 978804 979529 . - 0 ID=Thaps34698;Parent=Thaps34698;rank=1 chr6 . exon 978804 979529 . - . ID=Thaps34698.1;Parent=Thaps34698;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 983360 985995 . + . ID=Thaps41038;biotype=protein_coding;description=Gamma-glutamyl phosphate reductase [Source:UniProtKB/TrEMBL%3BAcc:B8C5V7];external_name=P5CS;logic_name=jgi_thaps3 chr6 ensembl transcript 983360 985995 . + . ID=Thaps41038;Parent=Thaps41038;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 983360 983651 . + 0 ID=Thaps41038;Parent=Thaps41038;rank=1 chr6 . exon 983360 983651 . + . ID=Thaps41038.1;Parent=Thaps41038;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 983766 984339 . + 0 ID=Thaps41038;Parent=Thaps41038;rank=2 chr6 . exon 983766 984339 . + . ID=Thaps41038.2;Parent=Thaps41038;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 984499 985069 . + 0 ID=Thaps41038;Parent=Thaps41038;rank=3 chr6 . exon 984499 985069 . + . ID=Thaps41038.3;Parent=Thaps41038;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 985153 985753 . + 0 ID=Thaps41038;Parent=Thaps41038;rank=4 chr6 . exon 985153 985753 . + . ID=Thaps41038.4;Parent=Thaps41038;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 985835 985995 . + 0 ID=Thaps41038;Parent=Thaps41038;rank=5 chr6 . exon 985835 985995 . + . ID=Thaps41038.5;Parent=Thaps41038;constitutive=1;ensembl_end_phase=2;rank=5 chr6 ensembl protein_coding_gene 976172 977148 . - . ID=Thaps6200;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5V2];external_name=Thaps6200;logic_name=jgi_thaps3 chr6 ensembl transcript 976172 977148 . - . ID=Thaps6200;Parent=Thaps6200;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 976172 976442 . - 0 ID=Thaps6200;Parent=Thaps6200;rank=2 chr6 . exon 976172 976442 . - . ID=Thaps6200.2;Parent=Thaps6200;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 976820 977148 . - 0 ID=Thaps6200;Parent=Thaps6200;rank=1 chr6 . exon 976820 977148 . - . ID=Thaps6200.1;Parent=Thaps6200;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 979991 981378 . - . ID=Thaps6203;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5V5];external_name=Thaps6203;logic_name=jgi_thaps3 chr6 ensembl transcript 979991 981378 . - . ID=Thaps6203;Parent=Thaps6203;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 979991 980769 . - 0 ID=Thaps6203;Parent=Thaps6203;rank=4 chr6 . exon 979991 980769 . - . ID=Thaps6203.4;Parent=Thaps6203;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 980873 980950 . - 0 ID=Thaps6203;Parent=Thaps6203;rank=3 chr6 . exon 980873 980950 . - . ID=Thaps6203.3;Parent=Thaps6203;constitutive=1;rank=3 chr6 . CDS 981038 981161 . - 0 ID=Thaps6203;Parent=Thaps6203;rank=2 chr6 . exon 981038 981161 . - . ID=Thaps6203.2;Parent=Thaps6203;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 981238 981378 . - 0 ID=Thaps6203;Parent=Thaps6203;rank=1 chr6 . exon 981238 981378 . - . ID=Thaps6203.1;Parent=Thaps6203;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 982140 983039 . + . ID=Thaps6204;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5V6];external_name=Thaps6204;logic_name=jgi_thaps3 chr6 ensembl transcript 982140 983039 . + . ID=Thaps6204;Parent=Thaps6204;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 982140 983039 . + 0 ID=Thaps6204;Parent=Thaps6204;rank=1 chr6 . exon 982140 983039 . + . ID=Thaps6204.1;Parent=Thaps6204;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 994048 994737 . - . ID=Thaps19141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5W0];external_name=Thaps19141;logic_name=jgi_thaps3 chr6 ensembl transcript 994048 994737 . - . ID=Thaps19141;Parent=Thaps19141;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 994048 994233 . - 0 ID=Thaps19141;Parent=Thaps19141;rank=3 chr6 . exon 994048 994233 . - . ID=Thaps19141.3;Parent=Thaps19141;constitutive=1;rank=3 chr6 . CDS 994308 994481 . - 0 ID=Thaps19141;Parent=Thaps19141;rank=2 chr6 . exon 994308 994481 . - . ID=Thaps19141.2;Parent=Thaps19141;constitutive=1;rank=2 chr6 . CDS 994582 994737 . - 0 ID=Thaps19141;Parent=Thaps19141;rank=1 chr6 . exon 994582 994737 . - . ID=Thaps19141.1;Parent=Thaps19141;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 986147 988296 . - . ID=Thaps23120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5V8];external_name=Thaps23120;logic_name=jgi_thaps3 chr6 ensembl transcript 986147 988296 . - . ID=Thaps23120;Parent=Thaps23120;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 986147 986267 . - 0 ID=Thaps23120;Parent=Thaps23120;rank=2 chr6 . exon 986147 986267 . - . ID=Thaps23120.2;Parent=Thaps23120;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 986348 988296 . - 0 ID=Thaps23120;Parent=Thaps23120;rank=1 chr6 . exon 986348 988296 . - . ID=Thaps23120.1;Parent=Thaps23120;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 988595 993774 . + . ID=Thaps6207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5V9];external_name=Thaps6207;logic_name=jgi_thaps3 chr6 ensembl transcript 988595 993774 . + . ID=Thaps6207;Parent=Thaps6207;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 988595 989495 . + 0 ID=Thaps6207;Parent=Thaps6207;rank=1 chr6 . exon 988595 989495 . + . ID=Thaps6207.1;Parent=Thaps6207;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 989550 990919 . + 0 ID=Thaps6207;Parent=Thaps6207;rank=2 chr6 . exon 989550 990919 . + . ID=Thaps6207.2;Parent=Thaps6207;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 990993 991685 . + 0 ID=Thaps6207;Parent=Thaps6207;rank=3 chr6 . exon 990993 991685 . + . ID=Thaps6207.3;Parent=Thaps6207;constitutive=1;rank=3 chr6 . CDS 991769 992476 . + 0 ID=Thaps6207;Parent=Thaps6207;rank=4 chr6 . exon 991769 992476 . + . ID=Thaps6207.4;Parent=Thaps6207;constitutive=1;rank=4 chr6 . CDS 992554 993774 . + 0 ID=Thaps6207;Parent=Thaps6207;rank=5 chr6 . exon 992554 993774 . + . ID=Thaps6207.5;Parent=Thaps6207;constitutive=1;rank=5 chr6 ensembl protein_coding_gene 995087 996097 . + . ID=Thaps6209;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5W1];external_name=Thaps6209;logic_name=jgi_thaps3 chr6 ensembl transcript 995087 996097 . + . ID=Thaps6209;Parent=Thaps6209;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 995087 996097 . + 0 ID=Thaps6209;Parent=Thaps6209;rank=1 chr6 . exon 995087 996097 . + . ID=Thaps6209.1;Parent=Thaps6209;constitutive=1;rank=1 chr6 . repeat_region 996129 996180 . ? . description=trf chr6 . repeat_region 999944 999952 . ? . description=dust chr6 ensembl protein_coding_gene 1002325 1003740 . - . ID=Thaps269091;biotype=protein_coding;description=Gtp-binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5W4];external_name=Thaps269091;logic_name=jgi_thaps3 chr6 ensembl transcript 1002325 1003740 . - . ID=Thaps269091;Parent=Thaps269091;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1002325 1003098 . - 0 ID=Thaps269091;Parent=Thaps269091;rank=2 chr6 . exon 1002325 1003098 . - . ID=Thaps269091.2;Parent=Thaps269091;constitutive=1;rank=2 chr6 . CDS 1003174 1003740 . - 0 ID=Thaps269091;Parent=Thaps269091;rank=1 chr6 . exon 1003174 1003740 . - . ID=Thaps269091.1;Parent=Thaps269091;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 996292 998913 . - . ID=Thaps34596;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5W2];external_name=Thaps34596;logic_name=jgi_thaps3 chr6 ensembl transcript 996292 998913 . - . ID=Thaps34596;Parent=Thaps34596;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 996292 996786 . - 0 ID=Thaps34596;Parent=Thaps34596;rank=4 chr6 . exon 996292 996786 . - . ID=Thaps34596.4;Parent=Thaps34596;constitutive=1;rank=4 chr6 . CDS 996835 998146 . - 0 ID=Thaps34596;Parent=Thaps34596;rank=3 chr6 . exon 996835 998146 . - . ID=Thaps34596.3;Parent=Thaps34596;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 998201 998577 . - 0 ID=Thaps34596;Parent=Thaps34596;rank=2 chr6 . exon 998201 998577 . - . ID=Thaps34596.2;Parent=Thaps34596;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 998620 998913 . - 0 ID=Thaps34596;Parent=Thaps34596;rank=1 chr6 . exon 998620 998913 . - . ID=Thaps34596.1;Parent=Thaps34596;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1004039 1005324 . + . ID=Thaps41045;biotype=protein_coding;description=Dtdp-glucose 4%2C6-dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8C5W5];external_name=DGD3;logic_name=jgi_thaps3 chr6 ensembl transcript 1004039 1005324 . + . ID=Thaps41045;Parent=Thaps41045;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1004039 1004105 . + 0 ID=Thaps41045;Parent=Thaps41045;rank=1 chr6 . exon 1004039 1004105 . + . ID=Thaps41045.1;Parent=Thaps41045;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1004306 1005324 . + 0 ID=Thaps41045;Parent=Thaps41045;rank=2 chr6 . exon 1004306 1005324 . + . ID=Thaps41045.2;Parent=Thaps41045;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1001323 1002215 . + . ID=Thaps6211;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5W3];external_name=Thaps6211;logic_name=jgi_thaps3 chr6 ensembl transcript 1001323 1002215 . + . ID=Thaps6211;Parent=Thaps6211;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1001323 1001882 . + 0 ID=Thaps6211;Parent=Thaps6211;rank=1 chr6 . exon 1001323 1001882 . + . ID=Thaps6211.1;Parent=Thaps6211;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1001984 1002215 . + 0 ID=Thaps6211;Parent=Thaps6211;rank=2 chr6 . exon 1001984 1002215 . + . ID=Thaps6211.2;Parent=Thaps6211;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1013150 1014606 . - . ID=Thaps23126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5W7];external_name=Thaps23126;logic_name=jgi_thaps3 chr6 ensembl transcript 1013150 1014606 . - . ID=Thaps23126;Parent=Thaps23126;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1013150 1014210 . - 0 ID=Thaps23126;Parent=Thaps23126;rank=2 chr6 . exon 1013150 1014210 . - . ID=Thaps23126.2;Parent=Thaps23126;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1014330 1014606 . - 0 ID=Thaps23126;Parent=Thaps23126;rank=1 chr6 . exon 1014330 1014606 . - . ID=Thaps23126.1;Parent=Thaps23126;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1014973 1018825 . + . ID=Thaps23127;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5W8];external_name=Thaps23127;logic_name=jgi_thaps3 chr6 ensembl transcript 1014973 1018825 . + . ID=Thaps23127;Parent=Thaps23127;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1014973 1015493 . + 0 ID=Thaps23127;Parent=Thaps23127;rank=1 chr6 . exon 1014973 1015493 . + . ID=Thaps23127.1;Parent=Thaps23127;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1015587 1016928 . + 0 ID=Thaps23127;Parent=Thaps23127;rank=2 chr6 . exon 1015587 1016928 . + . ID=Thaps23127.2;Parent=Thaps23127;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1017351 1018302 . + 0 ID=Thaps23127;Parent=Thaps23127;rank=3 chr6 . CDS 1018518 1018825 . + 0 ID=Thaps23127;Parent=Thaps23127;rank=4 chr6 ensembl protein_coding_gene 1007044 1011277 . + . ID=Thaps262874;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5W6];external_name=Thaps262874;logic_name=jgi_thaps3 chr6 ensembl transcript 1007044 1011277 . + . ID=Thaps262874;Parent=Thaps262874;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1007044 1007783 . + 0 ID=Thaps262874;Parent=Thaps262874;rank=1 chr6 . exon 1007044 1007783 . + . ID=Thaps262874.1;Parent=Thaps262874;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1007844 1007925 . + 0 ID=Thaps262874;Parent=Thaps262874;rank=2 chr6 . exon 1007844 1007925 . + . ID=Thaps262874.2;Parent=Thaps262874;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1007996 1008052 . + 0 ID=Thaps262874;Parent=Thaps262874;rank=3 chr6 . exon 1007996 1008052 . + . ID=Thaps262874.3;Parent=Thaps262874;constitutive=1;rank=3 chr6 . CDS 1008176 1008495 . + 0 ID=Thaps262874;Parent=Thaps262874;rank=4 chr6 . exon 1008176 1008495 . + . ID=Thaps262874.4;Parent=Thaps262874;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1008520 1008938 . + 0 ID=Thaps262874;Parent=Thaps262874;rank=5 chr6 . exon 1008520 1008938 . + . ID=Thaps262874.5;Parent=Thaps262874;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1008954 1010544 . + 0 ID=Thaps262874;Parent=Thaps262874;rank=6 chr6 . exon 1008954 1010544 . + . ID=Thaps262874.6;Parent=Thaps262874;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . CDS 1010629 1011277 . + 0 ID=Thaps262874;Parent=Thaps262874;rank=7 chr6 . exon 1010629 1011277 . + . ID=Thaps262874.7;Parent=Thaps262874;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . repeat_region 1017216 1017243 . + . description=Copia6LTR_TP chr6 . exon 1017351 1018302 . + . ID=Thaps23127.3;Parent=Thaps23127;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . exon 1018518 1018825 . + . ID=Thaps23127.4;Parent=Thaps23127;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 1022132 1023050 . + . ID=Thaps262877;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5X0];external_name=Thaps262877;logic_name=jgi_thaps3 chr6 ensembl transcript 1022132 1023050 . + . ID=Thaps262877;Parent=Thaps262877;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1022132 1022171 . + 0 ID=Thaps262877;Parent=Thaps262877;rank=1 chr6 . exon 1022132 1022171 . + . ID=Thaps262877.1;Parent=Thaps262877;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1022258 1022712 . + 0 ID=Thaps262877;Parent=Thaps262877;rank=2 chr6 . exon 1022258 1022712 . + . ID=Thaps262877.2;Parent=Thaps262877;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1022742 1022837 . + 0 ID=Thaps262877;Parent=Thaps262877;rank=3 chr6 . exon 1022742 1022837 . + . ID=Thaps262877.3;Parent=Thaps262877;constitutive=1;rank=3 chr6 . CDS 1022860 1023050 . + 0 ID=Thaps262877;Parent=Thaps262877;rank=4 chr6 . exon 1022860 1023050 . + . ID=Thaps262877.4;Parent=Thaps262877;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 1023416 1024351 . - . ID=Thaps269095;biotype=protein_coding;description=Methyl transferase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5X1];external_name=Thaps269095;logic_name=jgi_thaps3 chr6 ensembl transcript 1023416 1024351 . - . ID=Thaps269095;Parent=Thaps269095;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1023416 1023491 . - 0 ID=Thaps269095;Parent=Thaps269095;rank=3 chr6 . exon 1023416 1023491 . - . ID=Thaps269095.3;Parent=Thaps269095;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1023576 1024011 . - 0 ID=Thaps269095;Parent=Thaps269095;rank=2 chr6 . exon 1023576 1024011 . - . ID=Thaps269095.2;Parent=Thaps269095;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1024105 1024351 . - 0 ID=Thaps269095;Parent=Thaps269095;rank=1 chr6 . exon 1024105 1024351 . - . ID=Thaps269095.1;Parent=Thaps269095;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1018910 1021730 . - . ID=Thaps6217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5W9];external_name=Thaps6217;logic_name=jgi_thaps3 chr6 ensembl transcript 1018910 1021730 . - . ID=Thaps6217;Parent=Thaps6217;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1018910 1019612 . - 0 ID=Thaps6217;Parent=Thaps6217;rank=3 chr6 . exon 1018910 1019612 . - . ID=Thaps6217.3;Parent=Thaps6217;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1019787 1021480 . - 0 ID=Thaps6217;Parent=Thaps6217;rank=2 chr6 . exon 1019787 1021480 . - . ID=Thaps6217.2;Parent=Thaps6217;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1021560 1021730 . - 0 ID=Thaps6217;Parent=Thaps6217;rank=1 chr6 . exon 1021560 1021730 . - . ID=Thaps6217.1;Parent=Thaps6217;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1028132 1029025 . - . ID=Thaps23129;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5X3];external_name=Thaps23129;logic_name=jgi_thaps3 chr6 ensembl transcript 1028132 1029025 . - . ID=Thaps23129;Parent=Thaps23129;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1028132 1029025 . - 0 ID=Thaps23129;Parent=Thaps23129;rank=1 chr6 . exon 1028132 1029025 . - . ID=Thaps23129.1;Parent=Thaps23129;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1029477 1034343 . + . ID=Thaps23130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5X4];external_name=Thaps23130;logic_name=jgi_thaps3 chr6 ensembl transcript 1029477 1034343 . + . ID=Thaps23130;Parent=Thaps23130;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1029477 1033716 . + 0 ID=Thaps23130;Parent=Thaps23130;rank=1 chr6 . exon 1029477 1033716 . + . ID=Thaps23130.1;Parent=Thaps23130;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1033790 1034095 . + 0 ID=Thaps23130;Parent=Thaps23130;rank=2 chr6 . exon 1033790 1034095 . + . ID=Thaps23130.2;Parent=Thaps23130;constitutive=1;rank=2 chr6 . CDS 1034177 1034343 . + 0 ID=Thaps23130;Parent=Thaps23130;rank=3 chr6 . exon 1034177 1034343 . + . ID=Thaps23130.3;Parent=Thaps23130;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 1026926 1027231 . + . ID=Thaps35094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5X2];external_name=Thaps35094;logic_name=jgi_thaps3 chr6 ensembl transcript 1026926 1027231 . + . ID=Thaps35094;Parent=Thaps35094;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1026926 1027231 . + 0 ID=Thaps35094;Parent=Thaps35094;rank=1 chr6 . exon 1026926 1027231 . + . ID=Thaps35094.1;Parent=Thaps35094;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1035374 1037685 . - . ID=Thaps6223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5X5];external_name=Thaps6223;logic_name=jgi_thaps3 chr6 ensembl transcript 1035374 1037685 . - . ID=Thaps6223;Parent=Thaps6223;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1035374 1036017 . - 0 ID=Thaps6223;Parent=Thaps6223;rank=2 chr6 . exon 1035374 1036017 . - . ID=Thaps6223.2;Parent=Thaps6223;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1036128 1037685 . - 0 ID=Thaps6223;Parent=Thaps6223;rank=1 chr6 . repeat_region 1045301 1045311 . ? . description=dust chr6 ensembl protein_coding_gene 1038869 1040380 . + . ID=Thaps262879;biotype=protein_coding;description=Probable beta-ketoacyl-acyl carrier protein synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C5X7];external_name=KAS2;logic_name=jgi_thaps3 chr6 ensembl transcript 1038869 1040380 . + . ID=Thaps262879;Parent=Thaps262879;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1038869 1039116 . + 0 ID=Thaps262879;Parent=Thaps262879;rank=1 chr6 . exon 1038869 1039116 . + . ID=Thaps262879.1;Parent=Thaps262879;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1039216 1040380 . + 0 ID=Thaps262879;Parent=Thaps262879;rank=2 chr6 . exon 1039216 1040380 . + . ID=Thaps262879.2;Parent=Thaps262879;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1040447 1043324 . - . ID=Thaps262880;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5X8];external_name=Thaps262880;logic_name=jgi_thaps3 chr6 ensembl transcript 1040447 1043324 . - . ID=Thaps262880;Parent=Thaps262880;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1040447 1040799 . - 0 ID=Thaps262880;Parent=Thaps262880;rank=6 chr6 . exon 1040447 1040799 . - . ID=Thaps262880.6;Parent=Thaps262880;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 1040874 1041785 . - 0 ID=Thaps262880;Parent=Thaps262880;rank=5 chr6 . exon 1040874 1041785 . - . ID=Thaps262880.5;Parent=Thaps262880;constitutive=1;rank=5 chr6 . CDS 1041868 1042017 . - 0 ID=Thaps262880;Parent=Thaps262880;rank=4 chr6 . exon 1041868 1042017 . - . ID=Thaps262880.4;Parent=Thaps262880;constitutive=1;rank=4 chr6 . CDS 1042258 1042811 . - 0 ID=Thaps262880;Parent=Thaps262880;rank=3 chr6 . exon 1042258 1042811 . - . ID=Thaps262880.3;Parent=Thaps262880;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1042887 1043079 . - 0 ID=Thaps262880;Parent=Thaps262880;rank=2 chr6 . exon 1042887 1043079 . - . ID=Thaps262880.2;Parent=Thaps262880;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1043187 1043324 . - 0 ID=Thaps262880;Parent=Thaps262880;rank=1 chr6 . exon 1043187 1043324 . - . ID=Thaps262880.1;Parent=Thaps262880;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1043733 1045226 . - . ID=Thaps269097;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5X9];external_name=Thaps269097;logic_name=jgi_thaps3 chr6 ensembl transcript 1043733 1045226 . - . ID=Thaps269097;Parent=Thaps269097;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1043733 1044712 . - 0 ID=Thaps269097;Parent=Thaps269097;rank=2 chr6 . exon 1043733 1044712 . - . ID=Thaps269097.2;Parent=Thaps269097;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1044833 1045226 . - 0 ID=Thaps269097;Parent=Thaps269097;rank=1 chr6 . exon 1044833 1045226 . - . ID=Thaps269097.1;Parent=Thaps269097;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . exon 1036128 1037685 . - . ID=Thaps6223.1;Parent=Thaps6223;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1037879 1038608 . - . ID=Thaps6224;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5X6];external_name=Thaps6224;logic_name=jgi_thaps3 chr6 ensembl transcript 1037879 1038608 . - . ID=Thaps6224;Parent=Thaps6224;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1037879 1038168 . - 0 ID=Thaps6224;Parent=Thaps6224;rank=2 chr6 . exon 1037879 1038168 . - . ID=Thaps6224.2;Parent=Thaps6224;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1038206 1038608 . - 0 ID=Thaps6224;Parent=Thaps6224;rank=1 chr6 . exon 1038206 1038608 . - . ID=Thaps6224.1;Parent=Thaps6224;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 1047916 1047939 . ? . description=trf chr6 ensembl protein_coding_gene 1049914 1050373 . - . ID=Thaps20008;biotype=protein_coding;description=RS26%2C ribosomal protein 26 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y3];external_name=RS26;logic_name=jgi_thaps3 chr6 ensembl transcript 1049914 1050373 . - . ID=Thaps20008;Parent=Thaps20008;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1049914 1050148 . - 0 ID=Thaps20008;Parent=Thaps20008;rank=2 chr6 . exon 1049914 1050148 . - . ID=Thaps20008.2;Parent=Thaps20008;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1050327 1050373 . - 0 ID=Thaps20008;Parent=Thaps20008;rank=1 chr6 . exon 1050327 1050373 . - . ID=Thaps20008.1;Parent=Thaps20008;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1049211 1049507 . + . ID=Thaps34590;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y2];external_name=Thaps34590;logic_name=jgi_thaps3 chr6 ensembl transcript 1049211 1049507 . + . ID=Thaps34590;Parent=Thaps34590;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1049211 1049507 . + 0 ID=Thaps34590;Parent=Thaps34590;rank=1 chr6 . exon 1049211 1049507 . + . ID=Thaps34590.1;Parent=Thaps34590;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1046423 1046785 . - . ID=Thaps34635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y0];external_name=Thaps34635;logic_name=jgi_thaps3 chr6 ensembl transcript 1046423 1046785 . - . ID=Thaps34635;Parent=Thaps34635;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1046423 1046785 . - 0 ID=Thaps34635;Parent=Thaps34635;rank=1 chr6 . exon 1046423 1046785 . - . ID=Thaps34635.1;Parent=Thaps34635;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1052818 1057212 . + . ID=Thaps34876;biotype=protein_coding;description=Coatomer protein subunit alpha [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y5];external_name=COP1;logic_name=jgi_thaps3 chr6 ensembl transcript 1052818 1057212 . + . ID=Thaps34876;Parent=Thaps34876;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1052818 1052921 . + 0 ID=Thaps34876;Parent=Thaps34876;rank=1 chr6 . exon 1052818 1052921 . + . ID=Thaps34876.1;Parent=Thaps34876;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1053203 1053635 . + 0 ID=Thaps34876;Parent=Thaps34876;rank=2 chr6 . exon 1053203 1053635 . + . ID=Thaps34876.2;Parent=Thaps34876;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1053693 1054269 . + 0 ID=Thaps34876;Parent=Thaps34876;rank=3 chr6 . exon 1053693 1054269 . + . ID=Thaps34876.3;Parent=Thaps34876;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1054352 1055140 . + 0 ID=Thaps34876;Parent=Thaps34876;rank=4 chr6 . exon 1054352 1055140 . + . ID=Thaps34876.4;Parent=Thaps34876;constitutive=1;rank=4 chr6 . CDS 1055229 1055773 . + 0 ID=Thaps34876;Parent=Thaps34876;rank=5 chr6 . exon 1055229 1055773 . + . ID=Thaps34876.5;Parent=Thaps34876;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1055890 1057212 . + 0 ID=Thaps34876;Parent=Thaps34876;rank=6 chr6 ensembl protein_coding_gene 1048242 1048529 . + . ID=Thaps35017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y1];external_name=Thaps35017;logic_name=jgi_thaps3 chr6 ensembl transcript 1048242 1048529 . + . ID=Thaps35017;Parent=Thaps35017;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1048242 1048529 . + 0 ID=Thaps35017;Parent=Thaps35017;rank=1 chr6 . exon 1048242 1048529 . + . ID=Thaps35017.1;Parent=Thaps35017;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1051035 1052239 . + . ID=Thaps35022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y4];external_name=Thaps35022;logic_name=jgi_thaps3 chr6 ensembl transcript 1051035 1052239 . + . ID=Thaps35022;Parent=Thaps35022;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1051035 1051185 . + 0 ID=Thaps35022;Parent=Thaps35022;rank=1 chr6 . exon 1051035 1051185 . + . ID=Thaps35022.1;Parent=Thaps35022;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1051256 1051339 . + 0 ID=Thaps35022;Parent=Thaps35022;rank=2 chr6 . exon 1051256 1051339 . + . ID=Thaps35022.2;Parent=Thaps35022;constitutive=1;rank=2 chr6 . CDS 1051397 1051604 . + 0 ID=Thaps35022;Parent=Thaps35022;rank=3 chr6 . exon 1051397 1051604 . + . ID=Thaps35022.3;Parent=Thaps35022;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1051683 1051776 . + 0 ID=Thaps35022;Parent=Thaps35022;rank=4 chr6 . exon 1051683 1051776 . + . ID=Thaps35022.4;Parent=Thaps35022;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1051859 1052239 . + 0 ID=Thaps35022;Parent=Thaps35022;rank=5 chr6 . exon 1051859 1052239 . + . ID=Thaps35022.5;Parent=Thaps35022;constitutive=1;rank=5 chr6 . exon 1055890 1057212 . + . ID=Thaps34876.6;Parent=Thaps34876;constitutive=1;rank=6 chr6 ensembl protein_coding_gene 1057401 1058594 . - . ID=Thaps6231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y6];external_name=Thaps6231;logic_name=jgi_thaps3 chr6 ensembl transcript 1057401 1058594 . - . ID=Thaps6231;Parent=Thaps6231;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1057401 1058594 . - 0 ID=Thaps6231;Parent=Thaps6231;rank=1 chr6 . exon 1057401 1058594 . - . ID=Thaps6231.1;Parent=Thaps6231;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1059318 1061752 . - . ID=Thaps6232;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y7];external_name=Thaps6232;logic_name=jgi_thaps3 chr6 ensembl transcript 1059318 1061752 . - . ID=Thaps6232;Parent=Thaps6232;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1059318 1059678 . - 0 ID=Thaps6232;Parent=Thaps6232;rank=3 chr6 . exon 1059318 1059678 . - . ID=Thaps6232.3;Parent=Thaps6232;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1059710 1059714 . - 0 ID=Thaps6232;Parent=Thaps6232;rank=2 chr6 . exon 1059710 1059714 . - . ID=Thaps6232.2;Parent=Thaps6232;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1059962 1061752 . - 0 ID=Thaps6232;Parent=Thaps6232;rank=1 chr6 . exon 1059962 1061752 . - . ID=Thaps6232.1;Parent=Thaps6232;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1063204 1064681 . - . ID=Thaps6233;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y8];external_name=Thaps6233;logic_name=jgi_thaps3 chr6 ensembl transcript 1063204 1064681 . - . ID=Thaps6233;Parent=Thaps6233;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1063204 1064085 . - 0 ID=Thaps6233;Parent=Thaps6233;rank=2 chr6 . exon 1063204 1064085 . - . ID=Thaps6233.2;Parent=Thaps6233;constitutive=1;rank=2 chr6 . CDS 1064172 1064681 . - 0 ID=Thaps6233;Parent=Thaps6233;rank=1 chr6 . exon 1064172 1064681 . - . ID=Thaps6233.1;Parent=Thaps6233;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1065407 1067613 . + . ID=Thaps6234;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Y9];external_name=Thaps6234;logic_name=jgi_thaps3 chr6 ensembl transcript 1065407 1067613 . + . ID=Thaps6234;Parent=Thaps6234;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1065407 1066024 . + 0 ID=Thaps6234;Parent=Thaps6234;rank=1 chr6 . exon 1065407 1066024 . + . ID=Thaps6234.1;Parent=Thaps6234;constitutive=1;rank=1 chr6 . CDS 1066109 1066183 . + 0 ID=Thaps6234;Parent=Thaps6234;rank=2 chr6 . CDS 1066250 1066892 . + 0 ID=Thaps6234;Parent=Thaps6234;rank=3 chr6 . CDS 1066961 1067613 . + 0 ID=Thaps6234;Parent=Thaps6234;rank=4 chr6 . repeat_region 1067929 1067938 . ? . description=dust chr6 ensembl protein_coding_gene 1068433 1068696 . - . ID=Thaps34739;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z0];external_name=Thaps34739;logic_name=jgi_thaps3 chr6 ensembl transcript 1068433 1068696 . - . ID=Thaps34739;Parent=Thaps34739;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1068433 1068696 . - 0 ID=Thaps34739;Parent=Thaps34739;rank=1 chr6 . exon 1068433 1068696 . - . ID=Thaps34739.1;Parent=Thaps34739;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1071012 1072868 . - . ID=Thaps34824;biotype=protein_coding;description=Chloroplast ftsH [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z2];external_name=Thaps34824;logic_name=jgi_thaps3 chr6 ensembl transcript 1071012 1072868 . - . ID=Thaps34824;Parent=Thaps34824;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1071012 1072070 . - 0 ID=Thaps34824;Parent=Thaps34824;rank=3 chr6 . exon 1071012 1072070 . - . ID=Thaps34824.3;Parent=Thaps34824;constitutive=1;rank=3 chr6 . CDS 1072143 1072736 . - 0 ID=Thaps34824;Parent=Thaps34824;rank=2 chr6 . exon 1072143 1072736 . - . ID=Thaps34824.2;Parent=Thaps34824;constitutive=1;rank=2 chr6 . CDS 1072788 1072868 . - 0 ID=Thaps34824;Parent=Thaps34824;rank=1 chr6 . exon 1072788 1072868 . - . ID=Thaps34824.1;Parent=Thaps34824;constitutive=1;rank=1 chr6 . exon 1066109 1066183 . + . ID=Thaps6234.2;Parent=Thaps6234;constitutive=1;rank=2 chr6 . exon 1066250 1066892 . + . ID=Thaps6234.3;Parent=Thaps6234;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . exon 1066961 1067613 . + . ID=Thaps6234.4;Parent=Thaps6234;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 1069010 1070872 . + . ID=Thaps6236;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z1];external_name=Thaps6236;logic_name=jgi_thaps3 chr6 ensembl transcript 1069010 1070872 . + . ID=Thaps6236;Parent=Thaps6236;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1069010 1070872 . + 0 ID=Thaps6236;Parent=Thaps6236;rank=1 chr6 . exon 1069010 1070872 . + . ID=Thaps6236.1;Parent=Thaps6236;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1073552 1074574 . - . ID=Thaps6238;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z3];external_name=Thaps6238;logic_name=jgi_thaps3 chr6 ensembl transcript 1073552 1074574 . - . ID=Thaps6238;Parent=Thaps6238;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1073552 1074574 . - 0 ID=Thaps6238;Parent=Thaps6238;rank=1 chr6 . exon 1073552 1074574 . - . ID=Thaps6238.1;Parent=Thaps6238;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1083717 1086299 . - . ID=Thaps23137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z7];external_name=Thaps23137;logic_name=jgi_thaps3 chr6 ensembl transcript 1083717 1086299 . - . ID=Thaps23137;Parent=Thaps23137;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1083717 1086299 . - 0 ID=Thaps23137;Parent=Thaps23137;rank=1 chr6 . exon 1083717 1086299 . - . ID=Thaps23137.1;Parent=Thaps23137;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1077093 1078185 . - . ID=Thaps269100;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z4];external_name=Thaps269100;logic_name=jgi_thaps3 chr6 ensembl transcript 1077093 1078185 . - . ID=Thaps269100;Parent=Thaps269100;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1077093 1077329 . - 0 ID=Thaps269100;Parent=Thaps269100;rank=4 chr6 . exon 1077093 1077329 . - . ID=Thaps269100.4;Parent=Thaps269100;constitutive=1;rank=4 chr6 . CDS 1077415 1077521 . - 0 ID=Thaps269100;Parent=Thaps269100;rank=3 chr6 . exon 1077415 1077521 . - . ID=Thaps269100.3;Parent=Thaps269100;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1077603 1077949 . - 0 ID=Thaps269100;Parent=Thaps269100;rank=2 chr6 . exon 1077603 1077949 . - . ID=Thaps269100.2;Parent=Thaps269100;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1078004 1078185 . - 0 ID=Thaps269100;Parent=Thaps269100;rank=1 chr6 . exon 1078004 1078185 . - . ID=Thaps269100.1;Parent=Thaps269100;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1082008 1083319 . + . ID=Thaps28651;biotype=protein_coding;description=Acetyl-coa acetyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z6];external_name=AAT1_1;logic_name=jgi_thaps3 chr6 ensembl transcript 1082008 1083319 . + . ID=Thaps28651;Parent=Thaps28651;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1082008 1082304 . + 0 ID=Thaps28651;Parent=Thaps28651;rank=1 chr6 . exon 1082008 1082304 . + . ID=Thaps28651.1;Parent=Thaps28651;constitutive=1;rank=1 chr6 . CDS 1082390 1083319 . + 0 ID=Thaps28651;Parent=Thaps28651;rank=2 chr6 . exon 1082390 1083319 . + . ID=Thaps28651.2;Parent=Thaps28651;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1078929 1081628 . - . ID=Thaps6240;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z5];external_name=Thaps6240;logic_name=jgi_thaps3 chr6 ensembl transcript 1078929 1081628 . - . ID=Thaps6240;Parent=Thaps6240;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1078929 1081628 . - 0 ID=Thaps6240;Parent=Thaps6240;rank=1 chr6 . exon 1078929 1081628 . - . ID=Thaps6240.1;Parent=Thaps6240;constitutive=1;rank=1 chr6 . repeat_region 1088339 1088353 . ? . description=dust chr6 ensembl protein_coding_gene 1088767 1091784 . - . ID=Thaps34661;biotype=protein_coding;description=Helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z9];external_name=Thaps34661;logic_name=jgi_thaps3 chr6 ensembl transcript 1088767 1091784 . - . ID=Thaps34661;Parent=Thaps34661;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1088767 1088998 . - 0 ID=Thaps34661;Parent=Thaps34661;rank=3 chr6 . exon 1088767 1088998 . - . ID=Thaps34661.3;Parent=Thaps34661;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1089095 1089893 . - 0 ID=Thaps34661;Parent=Thaps34661;rank=2 chr6 . exon 1089095 1089893 . - . ID=Thaps34661.2;Parent=Thaps34661;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1089972 1091784 . - 0 ID=Thaps34661;Parent=Thaps34661;rank=1 chr6 . exon 1089972 1091784 . - . ID=Thaps34661.1;Parent=Thaps34661;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1086486 1087277 . + . ID=Thaps6243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C5Z8];external_name=Thaps6243;logic_name=jgi_thaps3 chr6 ensembl transcript 1086486 1087277 . + . ID=Thaps6243;Parent=Thaps6243;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1086486 1087277 . + 0 ID=Thaps6243;Parent=Thaps6243;rank=1 chr6 . exon 1086486 1087277 . + . ID=Thaps6243.1;Parent=Thaps6243;constitutive=1;rank=1 chr6 . repeat_region 1104725 1105810 . ? . description=trf chr6 ensembl protein_coding_gene 1102920 1108075 . + . ID=Thaps262891;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C602];external_name=Thaps262891;logic_name=jgi_thaps3 chr6 ensembl transcript 1102920 1108075 . + . ID=Thaps262891;Parent=Thaps262891;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1102920 1102992 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=1 chr6 . exon 1102920 1102992 . + . ID=Thaps262891.1;Parent=Thaps262891;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1103158 1103286 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=2 chr6 . exon 1103158 1103286 . + . ID=Thaps262891.2;Parent=Thaps262891;constitutive=1;rank=2 chr6 . CDS 1103578 1103703 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=3 chr6 . exon 1103578 1103703 . + . ID=Thaps262891.3;Parent=Thaps262891;constitutive=1;rank=3 chr6 . CDS 1104399 1104653 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=4 chr6 . exon 1104399 1104653 . + . ID=Thaps262891.4;Parent=Thaps262891;constitutive=1;rank=4 chr6 . CDS 1104735 1104761 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=5 chr6 . exon 1104735 1104761 . + . ID=Thaps262891.5;Parent=Thaps262891;constitutive=1;rank=5 chr6 . CDS 1104858 1104944 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=6 chr6 . exon 1104858 1104944 . + . ID=Thaps262891.6;Parent=Thaps262891;constitutive=1;rank=6 chr6 . CDS 1105046 1105090 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=7 chr6 . exon 1105046 1105090 . + . ID=Thaps262891.7;Parent=Thaps262891;constitutive=1;rank=7 chr6 . CDS 1105185 1105241 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=8 chr6 . exon 1105185 1105241 . + . ID=Thaps262891.8;Parent=Thaps262891;constitutive=1;rank=8 chr6 . CDS 1105319 1105402 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=9 chr6 . exon 1105319 1105402 . + . ID=Thaps262891.9;Parent=Thaps262891;constitutive=1;rank=9 chr6 . CDS 1105495 1105635 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=10 chr6 . exon 1105495 1105635 . + . ID=Thaps262891.10;Parent=Thaps262891;constitutive=1;rank=10 chr6 . CDS 1105747 1105782 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=11 chr6 . CDS 1106130 1106213 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=12 chr6 . CDS 1106434 1106508 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=13 chr6 . CDS 1106670 1106744 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=14 chr6 . CDS 1106851 1107278 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=15 chr6 . CDS 1107339 1107389 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=16 chr6 . CDS 1107444 1108075 . + 0 ID=Thaps262891;Parent=Thaps262891;rank=17 chr6 ensembl protein_coding_gene 1097521 1100289 . - . ID=Thaps34850;biotype=protein_coding;description=Atp-dependent serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C600];external_name=Thaps34850;logic_name=jgi_thaps3 chr6 ensembl transcript 1097521 1100289 . - . ID=Thaps34850;Parent=Thaps34850;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1097521 1098340 . - 0 ID=Thaps34850;Parent=Thaps34850;rank=4 chr6 . exon 1097521 1098340 . - . ID=Thaps34850.4;Parent=Thaps34850;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1098446 1099856 . - 0 ID=Thaps34850;Parent=Thaps34850;rank=3 chr6 . exon 1098446 1099856 . - . ID=Thaps34850.3;Parent=Thaps34850;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1099917 1100091 . - 0 ID=Thaps34850;Parent=Thaps34850;rank=2 chr6 . exon 1099917 1100091 . - . ID=Thaps34850.2;Parent=Thaps34850;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1100182 1100289 . - 0 ID=Thaps34850;Parent=Thaps34850;rank=1 chr6 . exon 1100182 1100289 . - . ID=Thaps34850.1;Parent=Thaps34850;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1101364 1102370 . - . ID=Thaps6248;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C601];external_name=Thaps6248;logic_name=jgi_thaps3 chr6 ensembl transcript 1101364 1102370 . - . ID=Thaps6248;Parent=Thaps6248;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1101364 1101803 . - 0 ID=Thaps6248;Parent=Thaps6248;rank=3 chr6 . exon 1101364 1101803 . - . ID=Thaps6248.3;Parent=Thaps6248;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1101828 1102020 . - 0 ID=Thaps6248;Parent=Thaps6248;rank=2 chr6 . exon 1101828 1102020 . - . ID=Thaps6248.2;Parent=Thaps6248;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1102170 1102370 . - 0 ID=Thaps6248;Parent=Thaps6248;rank=1 chr6 . exon 1102170 1102370 . - . ID=Thaps6248.1;Parent=Thaps6248;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1113057 1115000 . + . ID=Thaps23142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C604];external_name=Thaps23142;logic_name=jgi_thaps3 chr6 ensembl transcript 1113057 1115000 . + . ID=Thaps23142;Parent=Thaps23142;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1113057 1113336 . + 0 ID=Thaps23142;Parent=Thaps23142;rank=1 chr6 . exon 1113057 1113336 . + . ID=Thaps23142.1;Parent=Thaps23142;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1113744 1114554 . + 0 ID=Thaps23142;Parent=Thaps23142;rank=2 chr6 . exon 1113744 1114554 . + . ID=Thaps23142.2;Parent=Thaps23142;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1114643 1115000 . + 0 ID=Thaps23142;Parent=Thaps23142;rank=3 chr6 . exon 1114643 1115000 . + . ID=Thaps23142.3;Parent=Thaps23142;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . exon 1105747 1105782 . + . ID=Thaps262891.11;Parent=Thaps262891;constitutive=1;rank=11 chr6 . exon 1106130 1106213 . + . ID=Thaps262891.12;Parent=Thaps262891;constitutive=1;rank=12 chr6 . exon 1106434 1106508 . + . ID=Thaps262891.13;Parent=Thaps262891;constitutive=1;rank=13 chr6 . exon 1106670 1106744 . + . ID=Thaps262891.14;Parent=Thaps262891;constitutive=1;rank=14 chr6 . exon 1106851 1107278 . + . ID=Thaps262891.15;Parent=Thaps262891;constitutive=1;ensembl_end_phase=2;rank=15 chr6 . exon 1107339 1107389 . + . ID=Thaps262891.16;Parent=Thaps262891;constitutive=1;rank=16 chr6 . exon 1107444 1108075 . + . ID=Thaps262891.17;Parent=Thaps262891;constitutive=1;ensembl_end_phase=2;rank=17 chr6 ensembl protein_coding_gene 1110650 1112514 . - . ID=Thaps6250;biotype=protein_coding;description=Reductase [Source:UniProtKB/TrEMBL%3BAcc:B8C603];external_name=Thaps6250;logic_name=jgi_thaps3 chr6 ensembl transcript 1110650 1112514 . - . ID=Thaps6250;Parent=Thaps6250;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1110650 1110823 . - 0 ID=Thaps6250;Parent=Thaps6250;rank=3 chr6 . exon 1110650 1110823 . - . ID=Thaps6250.3;Parent=Thaps6250;constitutive=1;rank=3 chr6 . CDS 1110898 1111222 . - 0 ID=Thaps6250;Parent=Thaps6250;rank=2 chr6 . exon 1110898 1111222 . - . ID=Thaps6250.2;Parent=Thaps6250;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1111268 1112514 . - 0 ID=Thaps6250;Parent=Thaps6250;rank=1 chr6 . exon 1111268 1112514 . - . ID=Thaps6250.1;Parent=Thaps6250;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1115323 1116117 . + . ID=Thaps6252;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C605];external_name=Thaps6252;logic_name=jgi_thaps3 chr6 ensembl transcript 1115323 1116117 . + . ID=Thaps6252;Parent=Thaps6252;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1115323 1116117 . + 0 ID=Thaps6252;Parent=Thaps6252;rank=1 chr6 . exon 1115323 1116117 . + . ID=Thaps6252.1;Parent=Thaps6252;constitutive=1;rank=1 chr6 . repeat_region 1124462 1124510 . ? . description=trf chr6 ensembl protein_coding_gene 1120715 1122041 . + . ID=Thaps23143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C608];external_name=Thaps23143;logic_name=jgi_thaps3 chr6 ensembl transcript 1120715 1122041 . + . ID=Thaps23143;Parent=Thaps23143;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1120715 1121093 . + 0 ID=Thaps23143;Parent=Thaps23143;rank=1 chr6 . exon 1120715 1121093 . + . ID=Thaps23143.1;Parent=Thaps23143;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1121170 1122041 . + 0 ID=Thaps23143;Parent=Thaps23143;rank=2 chr6 . exon 1121170 1122041 . + . ID=Thaps23143.2;Parent=Thaps23143;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1123869 1127141 . + . ID=Thaps23144;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C610];external_name=Thaps23144;logic_name=jgi_thaps3 chr6 ensembl transcript 1123869 1127141 . + . ID=Thaps23144;Parent=Thaps23144;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1123869 1127141 . + 0 ID=Thaps23144;Parent=Thaps23144;rank=1 chr6 . exon 1123869 1127141 . + . ID=Thaps23144.1;Parent=Thaps23144;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1117482 1118786 . + . ID=Thaps34773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C606];external_name=Thaps34773;logic_name=jgi_thaps3 chr6 ensembl transcript 1117482 1118786 . + . ID=Thaps34773;Parent=Thaps34773;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1117482 1118786 . + 0 ID=Thaps34773;Parent=Thaps34773;rank=1 chr6 . exon 1117482 1118786 . + . ID=Thaps34773.1;Parent=Thaps34773;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1118801 1120166 . - . ID=Thaps6253;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C607];external_name=Thaps6253;logic_name=jgi_thaps3 chr6 ensembl transcript 1118801 1120166 . - . ID=Thaps6253;Parent=Thaps6253;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1118801 1119578 . - 0 ID=Thaps6253;Parent=Thaps6253;rank=2 chr6 . exon 1118801 1119578 . - . ID=Thaps6253.2;Parent=Thaps6253;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1119667 1120166 . - 0 ID=Thaps6253;Parent=Thaps6253;rank=1 chr6 . exon 1119667 1120166 . - . ID=Thaps6253.1;Parent=Thaps6253;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1122272 1123588 . + . ID=Thaps6255;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C609];external_name=Thaps6255;logic_name=jgi_thaps3 chr6 ensembl transcript 1122272 1123588 . + . ID=Thaps6255;Parent=Thaps6255;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1122272 1123588 . + 0 ID=Thaps6255;Parent=Thaps6255;rank=1 chr6 . exon 1122272 1123588 . + . ID=Thaps6255.1;Parent=Thaps6255;constitutive=1;rank=1 chr6 . repeat_region 1130130 1130137 . ? . description=dust chr6 . repeat_region 1131251 1131272 . ? . description=dust chr6 ensembl protein_coding_gene 1127381 1128322 . - . ID=Thaps34730;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C611];external_name=Thaps34730;logic_name=jgi_thaps3 chr6 ensembl transcript 1127381 1128322 . - . ID=Thaps34730;Parent=Thaps34730;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1127381 1127618 . - 0 ID=Thaps34730;Parent=Thaps34730;rank=3 chr6 . exon 1127381 1127618 . - . ID=Thaps34730.3;Parent=Thaps34730;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1127697 1128160 . - 0 ID=Thaps34730;Parent=Thaps34730;rank=2 chr6 . exon 1127697 1128160 . - . ID=Thaps34730.2;Parent=Thaps34730;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1128251 1128322 . - 0 ID=Thaps34730;Parent=Thaps34730;rank=1 chr6 . exon 1128251 1128322 . - . ID=Thaps34730.1;Parent=Thaps34730;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1131550 1133110 . + . ID=Thaps35135;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C613];external_name=Thaps35135;logic_name=jgi_thaps3 chr6 ensembl transcript 1131550 1133110 . + . ID=Thaps35135;Parent=Thaps35135;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1131550 1132121 . + 0 ID=Thaps35135;Parent=Thaps35135;rank=1 chr6 . exon 1131550 1132121 . + . ID=Thaps35135.1;Parent=Thaps35135;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1132227 1132300 . + 0 ID=Thaps35135;Parent=Thaps35135;rank=2 chr6 . exon 1132227 1132300 . + . ID=Thaps35135.2;Parent=Thaps35135;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1132403 1132746 . + 0 ID=Thaps35135;Parent=Thaps35135;rank=3 chr6 . exon 1132403 1132746 . + . ID=Thaps35135.3;Parent=Thaps35135;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1132835 1132934 . + 0 ID=Thaps35135;Parent=Thaps35135;rank=4 chr6 . exon 1132835 1132934 . + . ID=Thaps35135.4;Parent=Thaps35135;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1133040 1133110 . + 0 ID=Thaps35135;Parent=Thaps35135;rank=5 chr6 . exon 1133040 1133110 . + . ID=Thaps35135.5;Parent=Thaps35135;constitutive=1;ensembl_end_phase=2;rank=5 chr6 ensembl protein_coding_gene 1135237 1136929 . + . ID=Thaps41068;biotype=protein_coding;description=Actin like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C614];external_name=ACT2;logic_name=jgi_thaps3 chr6 ensembl transcript 1135237 1136929 . + . ID=Thaps41068;Parent=Thaps41068;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1135237 1136078 . + 0 ID=Thaps41068;Parent=Thaps41068;rank=1 chr6 . exon 1135237 1136078 . + . ID=Thaps41068.1;Parent=Thaps41068;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1136286 1136454 . + 0 ID=Thaps41068;Parent=Thaps41068;rank=2 chr6 . CDS 1136537 1136929 . + 0 ID=Thaps41068;Parent=Thaps41068;rank=3 chr6 ensembl protein_coding_gene 1130041 1130820 . - . ID=Thaps6258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C612];external_name=Thaps6258;logic_name=jgi_thaps3 chr6 ensembl transcript 1130041 1130820 . - . ID=Thaps6258;Parent=Thaps6258;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1130041 1130820 . - 0 ID=Thaps6258;Parent=Thaps6258;rank=1 chr6 . exon 1130041 1130820 . - . ID=Thaps6258.1;Parent=Thaps6258;constitutive=1;rank=1 chr6 . repeat_region 1142880 1142907 . ? . description=trf chr6 ensembl protein_coding_gene 1138606 1139898 . + . ID=Thaps23147;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C615];external_name=Thaps23147;logic_name=jgi_thaps3 chr6 ensembl transcript 1138606 1139898 . + . ID=Thaps23147;Parent=Thaps23147;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1138606 1139898 . + 0 ID=Thaps23147;Parent=Thaps23147;rank=1 chr6 . exon 1138606 1139898 . + . ID=Thaps23147.1;Parent=Thaps23147;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1140772 1142825 . - . ID=Thaps23148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C616];external_name=Thaps23148;logic_name=jgi_thaps3 chr6 ensembl transcript 1140772 1142825 . - . ID=Thaps23148;Parent=Thaps23148;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1140772 1141338 . - 0 ID=Thaps23148;Parent=Thaps23148;rank=2 chr6 . exon 1140772 1141338 . - . ID=Thaps23148.2;Parent=Thaps23148;constitutive=1;rank=2 chr6 . CDS 1141428 1142825 . - 0 ID=Thaps23148;Parent=Thaps23148;rank=1 chr6 . exon 1141428 1142825 . - . ID=Thaps23148.1;Parent=Thaps23148;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1144390 1145297 . - . ID=Thaps269110;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C617];external_name=Thaps269110;logic_name=jgi_thaps3 chr6 ensembl transcript 1144390 1145297 . - . ID=Thaps269110;Parent=Thaps269110;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1144390 1144925 . - 0 ID=Thaps269110;Parent=Thaps269110;rank=2 chr6 . exon 1144390 1144925 . - . ID=Thaps269110.2;Parent=Thaps269110;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1145033 1145297 . - 0 ID=Thaps269110;Parent=Thaps269110;rank=1 chr6 . exon 1145033 1145297 . - . ID=Thaps269110.1;Parent=Thaps269110;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . exon 1136286 1136454 . + . ID=Thaps41068.2;Parent=Thaps41068;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . exon 1136537 1136929 . + . ID=Thaps41068.3;Parent=Thaps41068;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1150751 1153291 . - . ID=Thaps23150;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C620];external_name=Thaps23150;logic_name=jgi_thaps3 chr6 ensembl transcript 1150751 1153291 . - . ID=Thaps23150;Parent=Thaps23150;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1150751 1153291 . - 0 ID=Thaps23150;Parent=Thaps23150;rank=1 chr6 . exon 1150751 1153291 . - . ID=Thaps23150.1;Parent=Thaps23150;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1146691 1147864 . - . ID=Thaps6264;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C618];external_name=Thaps6264;logic_name=jgi_thaps3 chr6 ensembl transcript 1146691 1147864 . - . ID=Thaps6264;Parent=Thaps6264;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1146691 1147036 . - 0 ID=Thaps6264;Parent=Thaps6264;rank=2 chr6 . exon 1146691 1147036 . - . ID=Thaps6264.2;Parent=Thaps6264;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1147131 1147864 . - 0 ID=Thaps6264;Parent=Thaps6264;rank=1 chr6 . exon 1147131 1147864 . - . ID=Thaps6264.1;Parent=Thaps6264;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1149304 1150663 . + . ID=Thaps6265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C619];external_name=Thaps6265;logic_name=jgi_thaps3 chr6 ensembl transcript 1149304 1150663 . + . ID=Thaps6265;Parent=Thaps6265;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1149304 1149753 . + 0 ID=Thaps6265;Parent=Thaps6265;rank=1 chr6 . exon 1149304 1149753 . + . ID=Thaps6265.1;Parent=Thaps6265;constitutive=1;rank=1 chr6 . CDS 1149836 1149941 . + 0 ID=Thaps6265;Parent=Thaps6265;rank=2 chr6 . exon 1149836 1149941 . + . ID=Thaps6265.2;Parent=Thaps6265;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1150020 1150663 . + 0 ID=Thaps6265;Parent=Thaps6265;rank=3 chr6 . exon 1150020 1150663 . + . ID=Thaps6265.3;Parent=Thaps6265;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . repeat_region 1158274 1158446 . + . description=scaffold_1_430_1_1110100_1111194 chr6 . repeat_region 1162985 1163156 . - . description=Gypsy1ALTR_TP chr6 ensembl protein_coding_gene 1155878 1156777 . - . ID=Thaps23152;biotype=protein_coding;description=G1/S-specific cyclin e2-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C621];external_name=Thaps23152;logic_name=jgi_thaps3 chr6 ensembl transcript 1155878 1156777 . - . ID=Thaps23152;Parent=Thaps23152;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1155878 1156777 . - 0 ID=Thaps23152;Parent=Thaps23152;rank=1 chr6 . exon 1155878 1156777 . - . ID=Thaps23152.1;Parent=Thaps23152;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1159040 1160796 . - . ID=Thaps269113;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C622];external_name=Thaps269113;logic_name=jgi_thaps3 chr6 ensembl transcript 1159040 1160796 . - . ID=Thaps269113;Parent=Thaps269113;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1159040 1159402 . - 0 ID=Thaps269113;Parent=Thaps269113;rank=3 chr6 . exon 1159040 1159402 . - . ID=Thaps269113.3;Parent=Thaps269113;constitutive=1;rank=3 chr6 . CDS 1159490 1159984 . - 0 ID=Thaps269113;Parent=Thaps269113;rank=2 chr6 . exon 1159490 1159984 . - . ID=Thaps269113.2;Parent=Thaps269113;constitutive=1;rank=2 chr6 . CDS 1160062 1160796 . - 0 ID=Thaps269113;Parent=Thaps269113;rank=1 chr6 . exon 1160062 1160796 . - . ID=Thaps269113.1;Parent=Thaps269113;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1163338 1164444 . + . ID=Thaps269114;biotype=protein_coding;description=Alcohol dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C623];external_name=Thaps269114;logic_name=jgi_thaps3 chr6 ensembl transcript 1163338 1164444 . + . ID=Thaps269114;Parent=Thaps269114;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1163338 1164444 . + 0 ID=Thaps269114;Parent=Thaps269114;rank=1 chr6 . exon 1163338 1164444 . + . ID=Thaps269114.1;Parent=Thaps269114;constitutive=1;rank=1 chr6 . repeat_region 1170048 1170095 . ? . description=trf chr6 ensembl protein_coding_gene 1175007 1175675 . - . ID=Thaps23159;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C629];external_name=Thaps23159;logic_name=jgi_thaps3 chr6 ensembl transcript 1175007 1175675 . - . ID=Thaps23159;Parent=Thaps23159;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1175007 1175675 . - 0 ID=Thaps23159;Parent=Thaps23159;rank=1 chr6 . exon 1175007 1175675 . - . ID=Thaps23159.1;Parent=Thaps23159;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1170031 1172781 . + . ID=Thaps269115;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C626];external_name=Thaps269115;logic_name=jgi_thaps3 chr6 ensembl transcript 1170031 1172781 . + . ID=Thaps269115;Parent=Thaps269115;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1170031 1172781 . + 0 ID=Thaps269115;Parent=Thaps269115;rank=1 chr6 . exon 1170031 1172781 . + . ID=Thaps269115.1;Parent=Thaps269115;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1174151 1174777 . + . ID=Thaps28667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C628];external_name=Thaps28667;logic_name=jgi_thaps3 chr6 ensembl transcript 1174151 1174777 . + . ID=Thaps28667;Parent=Thaps28667;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1174151 1174193 . + 0 ID=Thaps28667;Parent=Thaps28667;rank=1 chr6 . exon 1174151 1174193 . + . ID=Thaps28667.1;Parent=Thaps28667;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1174269 1174646 . + 0 ID=Thaps28667;Parent=Thaps28667;rank=2 chr6 . exon 1174269 1174646 . + . ID=Thaps28667.2;Parent=Thaps28667;constitutive=1;rank=2 chr6 . CDS 1174710 1174777 . + 0 ID=Thaps28667;Parent=Thaps28667;rank=3 chr6 . exon 1174710 1174777 . + . ID=Thaps28667.3;Parent=Thaps28667;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 1165814 1166059 . + . ID=Thaps34826;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C624];external_name=Thaps34826;logic_name=jgi_thaps3 chr6 ensembl transcript 1165814 1166059 . + . ID=Thaps34826;Parent=Thaps34826;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1165814 1166059 . + 0 ID=Thaps34826;Parent=Thaps34826;rank=1 chr6 . exon 1165814 1166059 . + . ID=Thaps34826.1;Parent=Thaps34826;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1172915 1173506 . - . ID=Thaps35031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C627];external_name=Thaps35031;logic_name=jgi_thaps3 chr6 ensembl transcript 1172915 1173506 . - . ID=Thaps35031;Parent=Thaps35031;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1172915 1173062 . - 0 ID=Thaps35031;Parent=Thaps35031;rank=3 chr6 . exon 1172915 1173062 . - . ID=Thaps35031.3;Parent=Thaps35031;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1173185 1173321 . - 0 ID=Thaps35031;Parent=Thaps35031;rank=2 chr6 . exon 1173185 1173321 . - . ID=Thaps35031.2;Parent=Thaps35031;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1173450 1173506 . - 0 ID=Thaps35031;Parent=Thaps35031;rank=1 chr6 . exon 1173450 1173506 . - . ID=Thaps35031.1;Parent=Thaps35031;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1166453 1169419 . - . ID=Thaps6273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C625];external_name=Thaps6273;logic_name=jgi_thaps3 chr6 ensembl transcript 1166453 1169419 . - . ID=Thaps6273;Parent=Thaps6273;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1166453 1169419 . - 0 ID=Thaps6273;Parent=Thaps6273;rank=1 chr6 . exon 1166453 1169419 . - . ID=Thaps6273.1;Parent=Thaps6273;constitutive=1;rank=1 chr6 . repeat_region 1183389 1183440 . ? . description=dust chr6 ensembl protein_coding_gene 1175907 1178072 . + . ID=Thaps23160;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C630];external_name=Thaps23160;logic_name=jgi_thaps3 chr6 ensembl transcript 1175907 1178072 . + . ID=Thaps23160;Parent=Thaps23160;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1175907 1176863 . + 0 ID=Thaps23160;Parent=Thaps23160;rank=1 chr6 . exon 1175907 1176863 . + . ID=Thaps23160.1;Parent=Thaps23160;constitutive=1;rank=1 chr6 . CDS 1176903 1177369 . + 0 ID=Thaps23160;Parent=Thaps23160;rank=2 chr6 . exon 1176903 1177369 . + . ID=Thaps23160.2;Parent=Thaps23160;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1177559 1178072 . + 0 ID=Thaps23160;Parent=Thaps23160;rank=3 chr6 . exon 1177559 1178072 . + . ID=Thaps23160.3;Parent=Thaps23160;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 1180947 1181603 . + . ID=Thaps262907;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C632];external_name=Thaps262907;logic_name=jgi_thaps3 chr6 ensembl transcript 1180947 1181603 . + . ID=Thaps262907;Parent=Thaps262907;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1180947 1181398 . + 0 ID=Thaps262907;Parent=Thaps262907;rank=1 chr6 . exon 1180947 1181398 . + . ID=Thaps262907.1;Parent=Thaps262907;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1181441 1181603 . + 0 ID=Thaps262907;Parent=Thaps262907;rank=2 chr6 . exon 1181441 1181603 . + . ID=Thaps262907.2;Parent=Thaps262907;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1183087 1184973 . - . ID=Thaps262908;biotype=protein_coding;description=RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C633];external_name=Thaps262908;logic_name=jgi_thaps3 chr6 ensembl transcript 1183087 1184973 . - . ID=Thaps262908;Parent=Thaps262908;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1183087 1183222 . - 0 ID=Thaps262908;Parent=Thaps262908;rank=3 chr6 . exon 1183087 1183222 . - . ID=Thaps262908.3;Parent=Thaps262908;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1183383 1184540 . - 0 ID=Thaps262908;Parent=Thaps262908;rank=2 chr6 . exon 1183383 1184540 . - . ID=Thaps262908.2;Parent=Thaps262908;constitutive=1;rank=2 chr6 . CDS 1184685 1184973 . - 0 ID=Thaps262908;Parent=Thaps262908;rank=1 chr6 . exon 1184685 1184973 . - . ID=Thaps262908.1;Parent=Thaps262908;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1178894 1180191 . - . ID=Thaps35048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C631];external_name=Thaps35048;logic_name=jgi_thaps3 chr6 ensembl transcript 1178894 1180191 . - . ID=Thaps35048;Parent=Thaps35048;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1178894 1179824 . - 0 ID=Thaps35048;Parent=Thaps35048;rank=2 chr6 . exon 1178894 1179824 . - . ID=Thaps35048.2;Parent=Thaps35048;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1180079 1180191 . - 0 ID=Thaps35048;Parent=Thaps35048;rank=1 chr6 . exon 1180079 1180191 . - . ID=Thaps35048.1;Parent=Thaps35048;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 1191749 1191772 . ? . description=trf chr6 ensembl protein_coding_gene 1185575 1186988 . + . ID=Thaps23162;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C634];external_name=Thaps23162;logic_name=jgi_thaps3 chr6 ensembl transcript 1185575 1186988 . + . ID=Thaps23162;Parent=Thaps23162;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1185575 1185750 . + 0 ID=Thaps23162;Parent=Thaps23162;rank=1 chr6 . exon 1185575 1185750 . + . ID=Thaps23162.1;Parent=Thaps23162;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1185837 1186002 . + 0 ID=Thaps23162;Parent=Thaps23162;rank=2 chr6 . exon 1185837 1186002 . + . ID=Thaps23162.2;Parent=Thaps23162;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1186044 1186988 . + 0 ID=Thaps23162;Parent=Thaps23162;rank=3 chr6 . exon 1186044 1186988 . + . ID=Thaps23162.3;Parent=Thaps23162;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1187194 1189336 . - . ID=Thaps269120;biotype=protein_coding;description=Heat shock protein 70 [Source:UniProtKB/TrEMBL%3BAcc:B8C635];external_name=HSP70;logic_name=jgi_thaps3 chr6 ensembl transcript 1187194 1189336 . - . ID=Thaps269120;Parent=Thaps269120;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1187194 1188247 . - 0 ID=Thaps269120;Parent=Thaps269120;rank=3 chr6 . exon 1187194 1188247 . - . ID=Thaps269120.3;Parent=Thaps269120;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1188337 1188969 . - 0 ID=Thaps269120;Parent=Thaps269120;rank=2 chr6 . exon 1188337 1188969 . - . ID=Thaps269120.2;Parent=Thaps269120;constitutive=1;rank=2 chr6 . CDS 1189062 1189336 . - 0 ID=Thaps269120;Parent=Thaps269120;rank=1 chr6 . exon 1189062 1189336 . - . ID=Thaps269120.1;Parent=Thaps269120;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1189919 1191116 . + . ID=Thaps6284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C636];external_name=Thaps6284;logic_name=jgi_thaps3 chr6 ensembl transcript 1189919 1191116 . + . ID=Thaps6284;Parent=Thaps6284;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1189919 1190083 . + 0 ID=Thaps6284;Parent=Thaps6284;rank=1 chr6 . exon 1189919 1190083 . + . ID=Thaps6284.1;Parent=Thaps6284;constitutive=1;rank=1 chr6 . CDS 1190184 1191116 . + 0 ID=Thaps6284;Parent=Thaps6284;rank=2 chr6 . exon 1190184 1191116 . + . ID=Thaps6284.2;Parent=Thaps6284;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1191772 1194168 . + . ID=Thaps6285;biotype=protein_coding;description=HSP90 family member [Source:UniProtKB/TrEMBL%3BAcc:B8C637];external_name=HSP90_1;logic_name=jgi_thaps3 chr6 ensembl transcript 1191772 1194168 . + . ID=Thaps6285;Parent=Thaps6285;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1191772 1192422 . + 0 ID=Thaps6285;Parent=Thaps6285;rank=1 chr6 . exon 1191772 1192422 . + . ID=Thaps6285.1;Parent=Thaps6285;constitutive=1;rank=1 chr6 . CDS 1192521 1193474 . + 0 ID=Thaps6285;Parent=Thaps6285;rank=2 chr6 . exon 1192521 1193474 . + . ID=Thaps6285.2;Parent=Thaps6285;constitutive=1;rank=2 chr6 . CDS 1193563 1194007 . + 0 ID=Thaps6285;Parent=Thaps6285;rank=3 chr6 . exon 1193563 1194007 . + . ID=Thaps6285.3;Parent=Thaps6285;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1194098 1194168 . + 0 ID=Thaps6285;Parent=Thaps6285;rank=4 chr6 . exon 1194098 1194168 . + . ID=Thaps6285.4;Parent=Thaps6285;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 1194420 1196622 . - . ID=Thaps6286;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C638];external_name=Thaps6286;logic_name=jgi_thaps3 chr6 ensembl transcript 1194420 1196622 . - . ID=Thaps6286;Parent=Thaps6286;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1194420 1194890 . - 0 ID=Thaps6286;Parent=Thaps6286;rank=3 chr6 . exon 1194420 1194890 . - . ID=Thaps6286.3;Parent=Thaps6286;constitutive=1;rank=3 chr6 . CDS 1194969 1196465 . - 0 ID=Thaps6286;Parent=Thaps6286;rank=2 chr6 . exon 1194969 1196465 . - . ID=Thaps6286.2;Parent=Thaps6286;constitutive=1;rank=2 chr6 . CDS 1196551 1196622 . - 0 ID=Thaps6286;Parent=Thaps6286;rank=1 chr6 . repeat_region 1197987 1197995 . ? . description=dust chr6 ensembl protein_coding_gene 1200470 1200845 . - . ID=Thaps262914;biotype=protein_coding;description=Heat shock protein [Source:UniProtKB/TrEMBL%3BAcc:B8C641];external_name=HSP90_2;logic_name=jgi_thaps3 chr6 ensembl transcript 1200470 1200845 . - . ID=Thaps262914;Parent=Thaps262914;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1200470 1200538 . - 0 ID=Thaps262914;Parent=Thaps262914;rank=2 chr6 . exon 1200470 1200538 . - . ID=Thaps262914.2;Parent=Thaps262914;constitutive=1;rank=2 chr6 . CDS 1200629 1200845 . - 0 ID=Thaps262914;Parent=Thaps262914;rank=1 chr6 . exon 1200629 1200845 . - . ID=Thaps262914.1;Parent=Thaps262914;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . exon 1196551 1196622 . - . ID=Thaps6286.1;Parent=Thaps6286;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1196779 1197588 . + . ID=Thaps6287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C639];external_name=Thaps6287;logic_name=jgi_thaps3 chr6 ensembl transcript 1196779 1197588 . + . ID=Thaps6287;Parent=Thaps6287;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1196779 1197588 . + 0 ID=Thaps6287;Parent=Thaps6287;rank=1 chr6 . exon 1196779 1197588 . + . ID=Thaps6287.1;Parent=Thaps6287;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1198054 1199778 . + . ID=Thaps6288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C640];external_name=Thaps6288;logic_name=jgi_thaps3 chr6 ensembl transcript 1198054 1199778 . + . ID=Thaps6288;Parent=Thaps6288;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1198054 1199778 . + 0 ID=Thaps6288;Parent=Thaps6288;rank=1 chr6 . exon 1198054 1199778 . + . ID=Thaps6288.1;Parent=Thaps6288;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1202246 1203108 . + . ID=Thaps6290;biotype=protein_coding;description=Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C642];external_name=NDK2;logic_name=jgi_thaps3 chr6 ensembl transcript 1202246 1203108 . + . ID=Thaps6290;Parent=Thaps6290;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1202246 1202275 . + 0 ID=Thaps6290;Parent=Thaps6290;rank=1 chr6 . exon 1202246 1202275 . + . ID=Thaps6290.1;Parent=Thaps6290;constitutive=1;rank=1 chr6 . CDS 1202582 1202711 . + 0 ID=Thaps6290;Parent=Thaps6290;rank=2 chr6 . exon 1202582 1202711 . + . ID=Thaps6290.2;Parent=Thaps6290;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1202810 1203108 . + 0 ID=Thaps6290;Parent=Thaps6290;rank=3 chr6 . exon 1202810 1203108 . + . ID=Thaps6290.3;Parent=Thaps6290;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . repeat_region 1212933 1212970 . ? . description=trf chr6 ensembl protein_coding_gene 1210951 1213156 . - . ID=Thaps269121;biotype=protein_coding;description=Dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C645];external_name=Thaps269121;logic_name=jgi_thaps3 chr6 ensembl transcript 1210951 1213156 . - . ID=Thaps269121;Parent=Thaps269121;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1210951 1211832 . - 0 ID=Thaps269121;Parent=Thaps269121;rank=7 chr6 . exon 1210951 1211832 . - . ID=Thaps269121.7;Parent=Thaps269121;constitutive=1;rank=7 chr6 . CDS 1211938 1212041 . - 0 ID=Thaps269121;Parent=Thaps269121;rank=6 chr6 . exon 1211938 1212041 . - . ID=Thaps269121.6;Parent=Thaps269121;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 1212112 1212261 . - 0 ID=Thaps269121;Parent=Thaps269121;rank=5 chr6 . exon 1212112 1212261 . - . ID=Thaps269121.5;Parent=Thaps269121;constitutive=1;rank=5 chr6 . CDS 1212295 1212442 . - 0 ID=Thaps269121;Parent=Thaps269121;rank=4 chr6 . exon 1212295 1212442 . - . ID=Thaps269121.4;Parent=Thaps269121;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1212464 1212574 . - 0 ID=Thaps269121;Parent=Thaps269121;rank=3 chr6 . exon 1212464 1212574 . - . ID=Thaps269121.3;Parent=Thaps269121;constitutive=1;rank=3 chr6 . CDS 1212794 1213026 . - 0 ID=Thaps269121;Parent=Thaps269121;rank=2 chr6 . exon 1212794 1213026 . - . ID=Thaps269121.2;Parent=Thaps269121;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1213099 1213156 . - 0 ID=Thaps269121;Parent=Thaps269121;rank=1 chr6 . exon 1213099 1213156 . - . ID=Thaps269121.1;Parent=Thaps269121;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1205329 1206618 . - . ID=Thaps6291;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C643];external_name=Thaps6291;logic_name=jgi_thaps3 chr6 ensembl transcript 1205329 1206618 . - . ID=Thaps6291;Parent=Thaps6291;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1205329 1206618 . - 0 ID=Thaps6291;Parent=Thaps6291;rank=1 chr6 . exon 1205329 1206618 . - . ID=Thaps6291.1;Parent=Thaps6291;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1206738 1210946 . + . ID=Thaps6292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C644];external_name=Thaps6292;logic_name=jgi_thaps3 chr6 ensembl transcript 1206738 1210946 . + . ID=Thaps6292;Parent=Thaps6292;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1206738 1207884 . + 0 ID=Thaps6292;Parent=Thaps6292;rank=1 chr6 . exon 1206738 1207884 . + . ID=Thaps6292.1;Parent=Thaps6292;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1207995 1208559 . + 0 ID=Thaps6292;Parent=Thaps6292;rank=2 chr6 . exon 1207995 1208559 . + . ID=Thaps6292.2;Parent=Thaps6292;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1208650 1208806 . + 0 ID=Thaps6292;Parent=Thaps6292;rank=3 chr6 . exon 1208650 1208806 . + . ID=Thaps6292.3;Parent=Thaps6292;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1208879 1208980 . + 0 ID=Thaps6292;Parent=Thaps6292;rank=4 chr6 . exon 1208879 1208980 . + . ID=Thaps6292.4;Parent=Thaps6292;constitutive=1;rank=4 chr6 . CDS 1209055 1209089 . + 0 ID=Thaps6292;Parent=Thaps6292;rank=5 chr6 . exon 1209055 1209089 . + . ID=Thaps6292.5;Parent=Thaps6292;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1209164 1210039 . + 0 ID=Thaps6292;Parent=Thaps6292;rank=6 chr6 . exon 1209164 1210039 . + . ID=Thaps6292.6;Parent=Thaps6292;constitutive=1;rank=6 chr6 . CDS 1210117 1210155 . + 0 ID=Thaps6292;Parent=Thaps6292;rank=7 chr6 . exon 1210117 1210155 . + . ID=Thaps6292.7;Parent=Thaps6292;constitutive=1;rank=7 chr6 . CDS 1210244 1210946 . + 0 ID=Thaps6292;Parent=Thaps6292;rank=8 chr6 . exon 1210244 1210946 . + . ID=Thaps6292.8;Parent=Thaps6292;constitutive=1;ensembl_end_phase=1;rank=8 chr6 ensembl protein_coding_gene 1222027 1224104 . - . ID=Thaps26293;biotype=protein_coding;description=Malate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C648];external_name=Thaps26293;logic_name=jgi_thaps3 chr6 ensembl transcript 1222027 1224104 . - . ID=Thaps26293;Parent=Thaps26293;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1222027 1222152 . - 0 ID=Thaps26293;Parent=Thaps26293;rank=5 chr6 . exon 1222027 1222152 . - . ID=Thaps26293.5;Parent=Thaps26293;constitutive=1;rank=5 chr6 . CDS 1222261 1222731 . - 0 ID=Thaps26293;Parent=Thaps26293;rank=4 chr6 . exon 1222261 1222731 . - . ID=Thaps26293.4;Parent=Thaps26293;constitutive=1;rank=4 chr6 . CDS 1222880 1223660 . - 0 ID=Thaps26293;Parent=Thaps26293;rank=3 chr6 . exon 1222880 1223660 . - . ID=Thaps26293.3;Parent=Thaps26293;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1223773 1223837 . - 0 ID=Thaps26293;Parent=Thaps26293;rank=2 chr6 . exon 1223773 1223837 . - . ID=Thaps26293.2;Parent=Thaps26293;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1223880 1224104 . - 0 ID=Thaps26293;Parent=Thaps26293;rank=1 chr6 . exon 1223880 1224104 . - . ID=Thaps26293.1;Parent=Thaps26293;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1216832 1217666 . + . ID=Thaps6294;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C646];external_name=Thaps6294;logic_name=jgi_thaps3 chr6 ensembl transcript 1216832 1217666 . + . ID=Thaps6294;Parent=Thaps6294;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1216832 1216943 . + 0 ID=Thaps6294;Parent=Thaps6294;rank=1 chr6 . exon 1216832 1216943 . + . ID=Thaps6294.1;Parent=Thaps6294;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1217065 1217126 . + 0 ID=Thaps6294;Parent=Thaps6294;rank=2 chr6 . exon 1217065 1217126 . + . ID=Thaps6294.2;Parent=Thaps6294;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1217220 1217666 . + 0 ID=Thaps6294;Parent=Thaps6294;rank=3 chr6 . exon 1217220 1217666 . + . ID=Thaps6294.3;Parent=Thaps6294;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1217954 1221904 . + . ID=Thaps6295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C647];external_name=Thaps6295;logic_name=jgi_thaps3 chr6 ensembl transcript 1217954 1221904 . + . ID=Thaps6295;Parent=Thaps6295;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1217954 1219205 . + 0 ID=Thaps6295;Parent=Thaps6295;rank=1 chr6 . exon 1217954 1219205 . + . ID=Thaps6295.1;Parent=Thaps6295;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1219302 1220476 . + 0 ID=Thaps6295;Parent=Thaps6295;rank=2 chr6 . exon 1219302 1220476 . + . ID=Thaps6295.2;Parent=Thaps6295;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1220558 1221904 . + 0 ID=Thaps6295;Parent=Thaps6295;rank=3 chr6 . exon 1220558 1221904 . + . ID=Thaps6295.3;Parent=Thaps6295;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1230397 1232265 . + . ID=Thaps23169;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C652];external_name=Thaps23169;logic_name=jgi_thaps3 chr6 ensembl transcript 1230397 1232265 . + . ID=Thaps23169;Parent=Thaps23169;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1230397 1232265 . + 0 ID=Thaps23169;Parent=Thaps23169;rank=1 chr6 . exon 1230397 1232265 . + . ID=Thaps23169.1;Parent=Thaps23169;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1233814 1234515 . + . ID=Thaps23170;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C654];external_name=Thaps23170;logic_name=jgi_thaps3 chr6 ensembl transcript 1233814 1234515 . + . ID=Thaps23170;Parent=Thaps23170;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1233814 1234051 . + 0 ID=Thaps23170;Parent=Thaps23170;rank=1 chr6 . exon 1233814 1234051 . + . ID=Thaps23170.1;Parent=Thaps23170;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1234139 1234515 . + 0 ID=Thaps23170;Parent=Thaps23170;rank=2 chr6 . exon 1234139 1234515 . + . ID=Thaps23170.2;Parent=Thaps23170;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1225469 1227706 . + . ID=Thaps269123;biotype=protein_coding;description=Cdc21-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C649];external_name=Thaps269123;logic_name=jgi_thaps3 chr6 ensembl transcript 1225469 1227706 . + . ID=Thaps269123;Parent=Thaps269123;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1225469 1225505 . + 0 ID=Thaps269123;Parent=Thaps269123;rank=1 chr6 . exon 1225469 1225505 . + . ID=Thaps269123.1;Parent=Thaps269123;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1225611 1226147 . + 0 ID=Thaps269123;Parent=Thaps269123;rank=2 chr6 . exon 1225611 1226147 . + . ID=Thaps269123.2;Parent=Thaps269123;constitutive=1;rank=2 chr6 . CDS 1226253 1226437 . + 0 ID=Thaps269123;Parent=Thaps269123;rank=3 chr6 . exon 1226253 1226437 . + . ID=Thaps269123.3;Parent=Thaps269123;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1226561 1227706 . + 0 ID=Thaps269123;Parent=Thaps269123;rank=4 chr6 . exon 1226561 1227706 . + . ID=Thaps269123.4;Parent=Thaps269123;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 1234898 1236541 . + . ID=Thaps28682;biotype=protein_coding;description=T-complex protein 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C655];external_name=Thaps28682;logic_name=jgi_thaps3 chr6 ensembl transcript 1234898 1236541 . + . ID=Thaps28682;Parent=Thaps28682;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1234898 1236541 . + 0 ID=Thaps28682;Parent=Thaps28682;rank=1 chr6 . exon 1234898 1236541 . + . ID=Thaps28682.1;Parent=Thaps28682;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1232303 1233202 . - . ID=Thaps34647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C653];external_name=Thaps34647;logic_name=jgi_thaps3 chr6 ensembl transcript 1232303 1233202 . - . ID=Thaps34647;Parent=Thaps34647;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1232303 1233202 . - 0 ID=Thaps34647;Parent=Thaps34647;rank=1 chr6 . exon 1232303 1233202 . - . ID=Thaps34647.1;Parent=Thaps34647;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1228005 1228616 . + . ID=Thaps35036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C650];external_name=Thaps35036;logic_name=jgi_thaps3 chr6 ensembl transcript 1228005 1228616 . + . ID=Thaps35036;Parent=Thaps35036;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1228005 1228616 . + 0 ID=Thaps35036;Parent=Thaps35036;rank=1 chr6 . exon 1228005 1228616 . + . ID=Thaps35036.1;Parent=Thaps35036;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1229018 1230079 . - . ID=Thaps6299;biotype=protein_coding;description=Serine/threonine dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8C651];external_name=Thaps6299;logic_name=jgi_thaps3 chr6 ensembl transcript 1229018 1230079 . - . ID=Thaps6299;Parent=Thaps6299;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1229018 1229448 . - 0 ID=Thaps6299;Parent=Thaps6299;rank=2 chr6 . exon 1229018 1229448 . - . ID=Thaps6299.2;Parent=Thaps6299;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1229515 1230079 . - 0 ID=Thaps6299;Parent=Thaps6299;rank=1 chr6 . exon 1229515 1230079 . - . ID=Thaps6299.1;Parent=Thaps6299;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 1238313 1238320 . ? . description=dust chr6 . repeat_region 1244554 1244591 . ? . description=dust chr6 ensembl snRNA_gene 1244583 1244775 . + . ID=EPrTPOG00000000086;biotype=snRNA;description=U2 spliceosomal RNA [Source:RFAM%3BAcc:RF00004];external_name=U2;logic_name=ncrna_eg chr6 ensembl snRNA 1244583 1244775 . + . ID=EPrTPOT00000000086;Parent=EPrTPOG00000000086;biotype=snRNA;logic_name=ncrna_eg chr6 . exon 1244583 1244775 . + . ID=EPrTPOE00000000086;Parent=EPrTPOT00000000086;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1238441 1239303 . - . ID=Thaps262923;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C656];external_name=Thaps262923;logic_name=jgi_thaps3 chr6 ensembl transcript 1238441 1239303 . - . ID=Thaps262923;Parent=Thaps262923;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1238441 1239303 . - 0 ID=Thaps262923;Parent=Thaps262923;rank=1 chr6 . exon 1238441 1239303 . - . ID=Thaps262923.1;Parent=Thaps262923;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1254752 1255051 . + . ID=Thaps262924;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C657];external_name=Thaps262924;logic_name=jgi_thaps3 chr6 ensembl transcript 1254752 1255051 . + . ID=Thaps262924;Parent=Thaps262924;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1254752 1255051 . + 0 ID=Thaps262924;Parent=Thaps262924;rank=1 chr6 . exon 1254752 1255051 . + . ID=Thaps262924.1;Parent=Thaps262924;constitutive=1;rank=1 chr6 . repeat_region 1256295 1256341 . ? . description=dust chr6 . repeat_region 1262506 1262514 . ? . description=dust chr6 . repeat_region 1264905 1264939 . ? . description=trf chr6 ensembl protein_coding_gene 1257707 1260000 . - . ID=Thaps262925;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C658];external_name=Thaps262925;logic_name=jgi_thaps3 chr6 ensembl transcript 1257707 1260000 . - . ID=Thaps262925;Parent=Thaps262925;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1257707 1257912 . - 0 ID=Thaps262925;Parent=Thaps262925;rank=7 chr6 . exon 1257707 1257912 . - . ID=Thaps262925.7;Parent=Thaps262925;constitutive=1;ensembl_end_phase=2;rank=7 chr6 . CDS 1257973 1258133 . - 0 ID=Thaps262925;Parent=Thaps262925;rank=6 chr6 . exon 1257973 1258133 . - . ID=Thaps262925.6;Parent=Thaps262925;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 1258224 1259207 . - 0 ID=Thaps262925;Parent=Thaps262925;rank=5 chr6 . exon 1258224 1259207 . - . ID=Thaps262925.5;Parent=Thaps262925;constitutive=1;rank=5 chr6 . CDS 1259285 1259317 . - 0 ID=Thaps262925;Parent=Thaps262925;rank=4 chr6 . exon 1259285 1259317 . - . ID=Thaps262925.4;Parent=Thaps262925;constitutive=1;rank=4 chr6 . CDS 1259409 1259450 . - 0 ID=Thaps262925;Parent=Thaps262925;rank=3 chr6 . exon 1259409 1259450 . - . ID=Thaps262925.3;Parent=Thaps262925;constitutive=1;rank=3 chr6 . CDS 1259493 1259541 . - 0 ID=Thaps262925;Parent=Thaps262925;rank=2 chr6 . exon 1259493 1259541 . - . ID=Thaps262925.2;Parent=Thaps262925;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1259578 1260000 . - 0 ID=Thaps262925;Parent=Thaps262925;rank=1 chr6 . exon 1259578 1260000 . - . ID=Thaps262925.1;Parent=Thaps262925;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1262811 1263922 . + . ID=Thaps262926;biotype=protein_coding;description=Phenylalanine tRNA synthtetase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C660];external_name=Thaps262926;logic_name=jgi_thaps3 chr6 ensembl transcript 1262811 1263922 . + . ID=Thaps262926;Parent=Thaps262926;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1262811 1263218 . + 0 ID=Thaps262926;Parent=Thaps262926;rank=1 chr6 . exon 1262811 1263218 . + . ID=Thaps262926.1;Parent=Thaps262926;constitutive=1;rank=1 chr6 . CDS 1263249 1263690 . + 0 ID=Thaps262926;Parent=Thaps262926;rank=2 chr6 . exon 1263249 1263690 . + . ID=Thaps262926.2;Parent=Thaps262926;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1263712 1263922 . + 0 ID=Thaps262926;Parent=Thaps262926;rank=3 chr6 . exon 1263712 1263922 . + . ID=Thaps262926.3;Parent=Thaps262926;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 1260625 1261255 . + . ID=Thaps6307;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C659];external_name=Thaps6307;logic_name=jgi_thaps3 chr6 ensembl transcript 1260625 1261255 . + . ID=Thaps6307;Parent=Thaps6307;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1260625 1260814 . + 0 ID=Thaps6307;Parent=Thaps6307;rank=1 chr6 . exon 1260625 1260814 . + . ID=Thaps6307.1;Parent=Thaps6307;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1260954 1261255 . + 0 ID=Thaps6307;Parent=Thaps6307;rank=2 chr6 . exon 1260954 1261255 . + . ID=Thaps6307.2;Parent=Thaps6307;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1265363 1266734 . - . ID=Thaps269127;biotype=protein_coding;description=Probable acyl-coa dehydrogenase%2C short/branched chain specific [Source:UniProtKB/TrEMBL%3BAcc:B8C661];external_name=ACD3;logic_name=jgi_thaps3 chr6 ensembl transcript 1265363 1266734 . - . ID=Thaps269127;Parent=Thaps269127;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1265363 1265674 . - 0 ID=Thaps269127;Parent=Thaps269127;rank=4 chr6 . exon 1265363 1265674 . - . ID=Thaps269127.4;Parent=Thaps269127;constitutive=1;rank=4 chr6 . CDS 1265760 1265840 . - 0 ID=Thaps269127;Parent=Thaps269127;rank=3 chr6 . exon 1265760 1265840 . - . ID=Thaps269127.3;Parent=Thaps269127;constitutive=1;rank=3 chr6 . CDS 1265921 1266520 . - 0 ID=Thaps269127;Parent=Thaps269127;rank=2 chr6 . exon 1265921 1266520 . - . ID=Thaps269127.2;Parent=Thaps269127;constitutive=1;rank=2 chr6 . CDS 1266603 1266734 . - 0 ID=Thaps269127;Parent=Thaps269127;rank=1 chr6 . exon 1266603 1266734 . - . ID=Thaps269127.1;Parent=Thaps269127;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1267788 1268814 . + . ID=Thaps35126;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C662];external_name=Thaps35126;logic_name=jgi_thaps3 chr6 ensembl transcript 1267788 1268814 . + . ID=Thaps35126;Parent=Thaps35126;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1267788 1268216 . + 0 ID=Thaps35126;Parent=Thaps35126;rank=1 chr6 . exon 1267788 1268216 . + . ID=Thaps35126.1;Parent=Thaps35126;constitutive=1;rank=1 chr6 . CDS 1268299 1268400 . + 0 ID=Thaps35126;Parent=Thaps35126;rank=2 chr6 . exon 1268299 1268400 . + . ID=Thaps35126.2;Parent=Thaps35126;constitutive=1;rank=2 chr6 . CDS 1268521 1268814 . + 0 ID=Thaps35126;Parent=Thaps35126;rank=3 chr6 . exon 1268521 1268814 . + . ID=Thaps35126.3;Parent=Thaps35126;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1269451 1271556 . - . ID=Thaps35164;biotype=protein_coding;external_name=Thaps35164;logic_name=jgi_thaps3 chr6 ensembl transcript 1269451 1271556 . - . ID=Thaps35164;Parent=Thaps35164;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1269451 1270111 . - 0 ID=Thaps35164;Parent=Thaps35164;rank=3 chr6 . exon 1269451 1270111 . - . ID=Thaps35164.3;Parent=Thaps35164;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1270160 1270683 . - 0 ID=Thaps35164;Parent=Thaps35164;rank=2 chr6 . exon 1270160 1270683 . - . ID=Thaps35164.2;Parent=Thaps35164;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1270921 1271556 . - 0 ID=Thaps35164;Parent=Thaps35164;rank=1 chr6 . exon 1270921 1271556 . - . ID=Thaps35164.1;Parent=Thaps35164;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1280547 1281575 . - . ID=Thaps15992;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C666];external_name=Thaps15992;logic_name=jgi_thaps3 chr6 ensembl transcript 1280547 1281575 . - . ID=Thaps15992;Parent=Thaps15992;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1280547 1281575 . - 0 ID=Thaps15992;Parent=Thaps15992;rank=1 chr6 . exon 1280547 1281575 . - . ID=Thaps15992.1;Parent=Thaps15992;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1278920 1279881 . + . ID=Thaps23177;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C665];external_name=Thaps23177;logic_name=jgi_thaps3 chr6 ensembl transcript 1278920 1279881 . + . ID=Thaps23177;Parent=Thaps23177;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1278920 1279051 . + 0 ID=Thaps23177;Parent=Thaps23177;rank=1 chr6 . exon 1278920 1279051 . + . ID=Thaps23177.1;Parent=Thaps23177;constitutive=1;rank=1 chr6 . CDS 1279216 1279881 . + 0 ID=Thaps23177;Parent=Thaps23177;rank=2 chr6 . exon 1279216 1279881 . + . ID=Thaps23177.2;Parent=Thaps23177;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1282051 1285710 . + . ID=Thaps23179;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C667];external_name=Thaps23179;logic_name=jgi_thaps3 chr6 ensembl transcript 1282051 1285710 . + . ID=Thaps23179;Parent=Thaps23179;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1282051 1282997 . + 0 ID=Thaps23179;Parent=Thaps23179;rank=1 chr6 . exon 1282051 1282997 . + . ID=Thaps23179.1;Parent=Thaps23179;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1283073 1283965 . + 0 ID=Thaps23179;Parent=Thaps23179;rank=2 chr6 . exon 1283073 1283965 . + . ID=Thaps23179.2;Parent=Thaps23179;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1284049 1285075 . + 0 ID=Thaps23179;Parent=Thaps23179;rank=3 chr6 . exon 1284049 1285075 . + . ID=Thaps23179.3;Parent=Thaps23179;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1285166 1285346 . + 0 ID=Thaps23179;Parent=Thaps23179;rank=4 chr6 . CDS 1285423 1285710 . + 0 ID=Thaps23179;Parent=Thaps23179;rank=5 chr6 ensembl protein_coding_gene 1275706 1275890 . + . ID=Thaps262934;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C664];external_name=Thaps262934;logic_name=jgi_thaps3 chr6 ensembl transcript 1275706 1275890 . + . ID=Thaps262934;Parent=Thaps262934;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1275706 1275890 . + 0 ID=Thaps262934;Parent=Thaps262934;rank=1 chr6 . exon 1275706 1275890 . + . ID=Thaps262934.1;Parent=Thaps262934;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . exon 1285166 1285346 . + . ID=Thaps23179.4;Parent=Thaps23179;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . exon 1285423 1285710 . + . ID=Thaps23179.5;Parent=Thaps23179;constitutive=1;rank=5 chr6 ensembl protein_coding_gene 1287345 1288369 . + . ID=Thaps262936;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C669];external_name=Thaps262936;logic_name=jgi_thaps3 chr6 ensembl transcript 1287345 1288369 . + . ID=Thaps262936;Parent=Thaps262936;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1287345 1287933 . + 0 ID=Thaps262936;Parent=Thaps262936;rank=1 chr6 . exon 1287345 1287933 . + . ID=Thaps262936.1;Parent=Thaps262936;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1288014 1288034 . + 0 ID=Thaps262936;Parent=Thaps262936;rank=2 chr6 . exon 1288014 1288034 . + . ID=Thaps262936.2;Parent=Thaps262936;constitutive=1;rank=2 chr6 . CDS 1288093 1288369 . + 0 ID=Thaps262936;Parent=Thaps262936;rank=3 chr6 . exon 1288093 1288369 . + . ID=Thaps262936.3;Parent=Thaps262936;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 1294011 1295281 . + . ID=Thaps269135;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C672];external_name=Thaps269135;logic_name=jgi_thaps3 chr6 ensembl transcript 1294011 1295281 . + . ID=Thaps269135;Parent=Thaps269135;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1294011 1294578 . + 0 ID=Thaps269135;Parent=Thaps269135;rank=1 chr6 . exon 1294011 1294578 . + . ID=Thaps269135.1;Parent=Thaps269135;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1294680 1295281 . + 0 ID=Thaps269135;Parent=Thaps269135;rank=2 chr6 . exon 1294680 1295281 . + . ID=Thaps269135.2;Parent=Thaps269135;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1292961 1293515 . - . ID=Thaps34742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C671];external_name=Thaps34742;logic_name=jgi_thaps3 chr6 ensembl transcript 1292961 1293515 . - . ID=Thaps34742;Parent=Thaps34742;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1292961 1293515 . - 0 ID=Thaps34742;Parent=Thaps34742;rank=1 chr6 . exon 1292961 1293515 . - . ID=Thaps34742.1;Parent=Thaps34742;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1290281 1292486 . - . ID=Thaps41106;biotype=protein_coding;description=Cell cycle control protein cwf4 [Source:UniProtKB/TrEMBL%3BAcc:B8C670];external_name=Thaps41106;logic_name=jgi_thaps3 chr6 ensembl transcript 1290281 1292486 . - . ID=Thaps41106;Parent=Thaps41106;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1290281 1290844 . - 0 ID=Thaps41106;Parent=Thaps41106;rank=2 chr6 . exon 1290281 1290844 . - . ID=Thaps41106.2;Parent=Thaps41106;constitutive=1;rank=2 chr6 . CDS 1290927 1292486 . - 0 ID=Thaps41106;Parent=Thaps41106;rank=1 chr6 . exon 1290927 1292486 . - . ID=Thaps41106.1;Parent=Thaps41106;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1285788 1286723 . - . ID=Thaps6316;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C668];external_name=Thaps6316;logic_name=jgi_thaps3 chr6 ensembl transcript 1285788 1286723 . - . ID=Thaps6316;Parent=Thaps6316;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1285788 1286723 . - 0 ID=Thaps6316;Parent=Thaps6316;rank=1 chr6 . exon 1285788 1286723 . - . ID=Thaps6316.1;Parent=Thaps6316;constitutive=1;rank=1 chr6 . biological_region 1304556 1304559 0.999 + . logic_name=eponine chr6 ensembl protein_coding_gene 1295372 1296534 . - . ID=Thaps23184;biotype=protein_coding;description=Dihydrodiol dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C673];external_name=Thaps23184;logic_name=jgi_thaps3 chr6 ensembl transcript 1295372 1296534 . - . ID=Thaps23184;Parent=Thaps23184;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1295372 1295666 . - 0 ID=Thaps23184;Parent=Thaps23184;rank=2 chr6 . exon 1295372 1295666 . - . ID=Thaps23184.2;Parent=Thaps23184;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1295762 1296534 . - 0 ID=Thaps23184;Parent=Thaps23184;rank=1 chr6 . exon 1295762 1296534 . - . ID=Thaps23184.1;Parent=Thaps23184;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1301970 1304551 . + . ID=Thaps23187;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C677];external_name=Thaps23187;logic_name=jgi_thaps3 chr6 ensembl transcript 1301970 1304551 . + . ID=Thaps23187;Parent=Thaps23187;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1301970 1304291 . + 0 ID=Thaps23187;Parent=Thaps23187;rank=1 chr6 . exon 1301970 1304291 . + . ID=Thaps23187.1;Parent=Thaps23187;constitutive=1;rank=1 chr6 . CDS 1304375 1304551 . + 0 ID=Thaps23187;Parent=Thaps23187;rank=2 chr6 . exon 1304375 1304551 . + . ID=Thaps23187.2;Parent=Thaps23187;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1299813 1300106 . + . ID=Thaps262941;biotype=protein_coding;description=Putative uncharacterized protein HSF5 [Source:UniProtKB/TrEMBL%3BAcc:B8C676];external_name=HSF5;logic_name=jgi_thaps3 chr6 ensembl transcript 1299813 1300106 . + . ID=Thaps262941;Parent=Thaps262941;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1299813 1300106 . + 0 ID=Thaps262941;Parent=Thaps262941;rank=1 chr6 . exon 1299813 1300106 . + . ID=Thaps262941.1;Parent=Thaps262941;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1297202 1298396 . + . ID=Thaps28704;biotype=protein_coding;description=Sideroflexin 5 [Source:UniProtKB/TrEMBL%3BAcc:B8C674];external_name=Thaps28704;logic_name=jgi_thaps3 chr6 ensembl transcript 1297202 1298396 . + . ID=Thaps28704;Parent=Thaps28704;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1297202 1297423 . + 0 ID=Thaps28704;Parent=Thaps28704;rank=1 chr6 . exon 1297202 1297423 . + . ID=Thaps28704.1;Parent=Thaps28704;constitutive=1;rank=1 chr6 . CDS 1297520 1297589 . + 0 ID=Thaps28704;Parent=Thaps28704;rank=2 chr6 . exon 1297520 1297589 . + . ID=Thaps28704.2;Parent=Thaps28704;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1297684 1298396 . + 0 ID=Thaps28704;Parent=Thaps28704;rank=3 chr6 . exon 1297684 1298396 . + . ID=Thaps28704.3;Parent=Thaps28704;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 1298539 1299201 . - . ID=Thaps6323;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C675];external_name=Thaps6323;logic_name=jgi_thaps3 chr6 ensembl transcript 1298539 1299201 . - . ID=Thaps6323;Parent=Thaps6323;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1298539 1299201 . - 0 ID=Thaps6323;Parent=Thaps6323;rank=1 chr6 . exon 1298539 1299201 . - . ID=Thaps6323.1;Parent=Thaps6323;constitutive=1;rank=1 chr6 . repeat_region 1313633 1313641 . ? . description=dust chr6 ensembl protein_coding_gene 1305949 1307199 . - . ID=Thaps23188;biotype=protein_coding;description=Putative uncharacterized protein HSF4 [Source:UniProtKB/TrEMBL%3BAcc:B8C678];external_name=HSF4;logic_name=jgi_thaps3 chr6 ensembl transcript 1305949 1307199 . - . ID=Thaps23188;Parent=Thaps23188;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1305949 1306934 . - 0 ID=Thaps23188;Parent=Thaps23188;rank=2 chr6 . exon 1305949 1306934 . - . ID=Thaps23188.2;Parent=Thaps23188;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1307049 1307199 . - 0 ID=Thaps23188;Parent=Thaps23188;rank=1 chr6 . exon 1307049 1307199 . - . ID=Thaps23188.1;Parent=Thaps23188;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1310131 1312164 . - . ID=Thaps269141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C679];external_name=Thaps269141;logic_name=jgi_thaps3 chr6 ensembl transcript 1310131 1312164 . - . ID=Thaps269141;Parent=Thaps269141;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1310131 1310797 . - 0 ID=Thaps269141;Parent=Thaps269141;rank=2 chr6 . exon 1310131 1310797 . - . ID=Thaps269141.2;Parent=Thaps269141;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1310900 1312164 . - 0 ID=Thaps269141;Parent=Thaps269141;rank=1 chr6 . exon 1310900 1312164 . - . ID=Thaps269141.1;Parent=Thaps269141;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 1316783 1316829 . ? . description=trf chr6 . repeat_region 1316819 1317052 . ? . description=trf chr6 . repeat_region 1320981 1321007 . ? . description=trf chr6 ensembl protein_coding_gene 1316244 1317968 . + . ID=Thaps23191;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C680];external_name=Thaps23191;logic_name=jgi_thaps3 chr6 ensembl transcript 1316244 1317968 . + . ID=Thaps23191;Parent=Thaps23191;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1316244 1316835 . + 0 ID=Thaps23191;Parent=Thaps23191;rank=1 chr6 . exon 1316244 1316835 . + . ID=Thaps23191.1;Parent=Thaps23191;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1316931 1316945 . + 0 ID=Thaps23191;Parent=Thaps23191;rank=2 chr6 . exon 1316931 1316945 . + . ID=Thaps23191.2;Parent=Thaps23191;constitutive=1;rank=2 chr6 . CDS 1317037 1317968 . + 0 ID=Thaps23191;Parent=Thaps23191;rank=3 chr6 . exon 1317037 1317968 . + . ID=Thaps23191.3;Parent=Thaps23191;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 1321991 1323720 . + . ID=Thaps262946;biotype=protein_coding;description=Cryptochrome/Photolyase family 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C682];external_name=CPF1;logic_name=jgi_thaps3 chr6 ensembl transcript 1321991 1323720 . + . ID=Thaps262946;Parent=Thaps262946;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1321991 1322643 . + 0 ID=Thaps262946;Parent=Thaps262946;rank=1 chr6 . exon 1321991 1322643 . + . ID=Thaps262946.1;Parent=Thaps262946;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1322704 1323720 . + 0 ID=Thaps262946;Parent=Thaps262946;rank=2 chr6 . exon 1322704 1323720 . + . ID=Thaps262946.2;Parent=Thaps262946;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1318484 1320465 . + . ID=Thaps6330;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C681];external_name=Thaps6330;logic_name=jgi_thaps3 chr6 ensembl transcript 1318484 1320465 . + . ID=Thaps6330;Parent=Thaps6330;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1318484 1319074 . + 0 ID=Thaps6330;Parent=Thaps6330;rank=1 chr6 . exon 1318484 1319074 . + . ID=Thaps6330.1;Parent=Thaps6330;constitutive=1;rank=1 chr6 . CDS 1319156 1319230 . + 0 ID=Thaps6330;Parent=Thaps6330;rank=2 chr6 . exon 1319156 1319230 . + . ID=Thaps6330.2;Parent=Thaps6330;constitutive=1;rank=2 chr6 . CDS 1319323 1319461 . + 0 ID=Thaps6330;Parent=Thaps6330;rank=3 chr6 . exon 1319323 1319461 . + . ID=Thaps6330.3;Parent=Thaps6330;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1319558 1320465 . + 0 ID=Thaps6330;Parent=Thaps6330;rank=4 chr6 . exon 1319558 1320465 . + . ID=Thaps6330.4;Parent=Thaps6330;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 1324267 1324708 . - . ID=Thaps6332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C683];external_name=Thaps6332;logic_name=jgi_thaps3 chr6 ensembl transcript 1324267 1324708 . - . ID=Thaps6332;Parent=Thaps6332;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1324267 1324513 . - 0 ID=Thaps6332;Parent=Thaps6332;rank=2 chr6 . exon 1324267 1324513 . - . ID=Thaps6332.2;Parent=Thaps6332;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1324611 1324708 . - 0 ID=Thaps6332;Parent=Thaps6332;rank=1 chr6 . exon 1324611 1324708 . - . ID=Thaps6332.1;Parent=Thaps6332;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 1332197 1332257 . ? . description=dust chr6 ensembl protein_coding_gene 1327182 1328484 . + . ID=Thaps23196;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C685];external_name=Thaps23196;logic_name=jgi_thaps3 chr6 ensembl transcript 1327182 1328484 . + . ID=Thaps23196;Parent=Thaps23196;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1327182 1327290 . + 0 ID=Thaps23196;Parent=Thaps23196;rank=1 chr6 . exon 1327182 1327290 . + . ID=Thaps23196.1;Parent=Thaps23196;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1327367 1327514 . + 0 ID=Thaps23196;Parent=Thaps23196;rank=2 chr6 . exon 1327367 1327514 . + . ID=Thaps23196.2;Parent=Thaps23196;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1327634 1327733 . + 0 ID=Thaps23196;Parent=Thaps23196;rank=3 chr6 . exon 1327634 1327733 . + . ID=Thaps23196.3;Parent=Thaps23196;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1327777 1328318 . + 0 ID=Thaps23196;Parent=Thaps23196;rank=4 chr6 . exon 1327777 1328318 . + . ID=Thaps23196.4;Parent=Thaps23196;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1328409 1328484 . + 0 ID=Thaps23196;Parent=Thaps23196;rank=5 chr6 . exon 1328409 1328484 . + . ID=Thaps23196.5;Parent=Thaps23196;constitutive=1;ensembl_end_phase=1;rank=5 chr6 ensembl protein_coding_gene 1329329 1330853 . - . ID=Thaps28710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C686];external_name=Thaps28710;logic_name=jgi_thaps3 chr6 ensembl transcript 1329329 1330853 . - . ID=Thaps28710;Parent=Thaps28710;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1329329 1330513 . - 0 ID=Thaps28710;Parent=Thaps28710;rank=2 chr6 . exon 1329329 1330513 . - . ID=Thaps28710.2;Parent=Thaps28710;constitutive=1;rank=2 chr6 . CDS 1330599 1330853 . - 0 ID=Thaps28710;Parent=Thaps28710;rank=1 chr6 . exon 1330599 1330853 . - . ID=Thaps28710.1;Parent=Thaps28710;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1325130 1326733 . - . ID=Thaps41113;biotype=protein_coding;description=Delta-6 fatty acid desaturaseProbable microsomal delta-6 desaturase [Source:UniProtKB/TrEMBL%3BAcc:Q4G2T1];external_name=DESI;logic_name=jgi_thaps3 chr6 ensembl transcript 1325130 1326733 . - . ID=Thaps41113;Parent=Thaps41113;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1325130 1326482 . - 0 ID=Thaps41113;Parent=Thaps41113;rank=2 chr6 . exon 1325130 1326482 . - . ID=Thaps41113.2;Parent=Thaps41113;constitutive=1;rank=2 chr6 . CDS 1326632 1326733 . - 0 ID=Thaps41113;Parent=Thaps41113;rank=1 chr6 . exon 1326632 1326733 . - . ID=Thaps41113.1;Parent=Thaps41113;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1333599 1335185 . + . ID=Thaps6339;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C687];external_name=Thaps6339;logic_name=jgi_thaps3 chr6 ensembl transcript 1333599 1335185 . + . ID=Thaps6339;Parent=Thaps6339;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1333599 1333814 . + 0 ID=Thaps6339;Parent=Thaps6339;rank=1 chr6 . exon 1333599 1333814 . + . ID=Thaps6339.1;Parent=Thaps6339;constitutive=1;rank=1 chr6 . CDS 1333870 1333941 . + 0 ID=Thaps6339;Parent=Thaps6339;rank=2 chr6 . exon 1333870 1333941 . + . ID=Thaps6339.2;Parent=Thaps6339;constitutive=1;rank=2 chr6 . CDS 1334115 1335185 . + 0 ID=Thaps6339;Parent=Thaps6339;rank=3 chr6 . exon 1334115 1335185 . + . ID=Thaps6339.3;Parent=Thaps6339;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1337971 1339158 . + . ID=Thaps23198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C690];external_name=Thaps23198;logic_name=jgi_thaps3 chr6 ensembl transcript 1337971 1339158 . + . ID=Thaps23198;Parent=Thaps23198;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1337971 1339158 . + 0 ID=Thaps23198;Parent=Thaps23198;rank=1 chr6 . exon 1337971 1339158 . + . ID=Thaps23198.1;Parent=Thaps23198;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1335701 1336273 . - . ID=Thaps262949;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C688];external_name=Thaps262949;logic_name=jgi_thaps3 chr6 ensembl transcript 1335701 1336273 . - . ID=Thaps262949;Parent=Thaps262949;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1335701 1336273 . - 0 ID=Thaps262949;Parent=Thaps262949;rank=1 chr6 . exon 1335701 1336273 . - . ID=Thaps262949.1;Parent=Thaps262949;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1337038 1337655 . + . ID=Thaps6341;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C689];external_name=Thaps6341;logic_name=jgi_thaps3 chr6 ensembl transcript 1337038 1337655 . + . ID=Thaps6341;Parent=Thaps6341;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1337038 1337655 . + 0 ID=Thaps6341;Parent=Thaps6341;rank=1 chr6 . exon 1337038 1337655 . + . ID=Thaps6341.1;Parent=Thaps6341;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1339380 1341088 . - . ID=Thaps6343;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C691];external_name=Thaps6343;logic_name=jgi_thaps3 chr6 ensembl transcript 1339380 1341088 . - . ID=Thaps6343;Parent=Thaps6343;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1339380 1340393 . - 0 ID=Thaps6343;Parent=Thaps6343;rank=3 chr6 . exon 1339380 1340393 . - . ID=Thaps6343.3;Parent=Thaps6343;constitutive=1;rank=3 chr6 . CDS 1340501 1340853 . - 0 ID=Thaps6343;Parent=Thaps6343;rank=2 chr6 . exon 1340501 1340853 . - . ID=Thaps6343.2;Parent=Thaps6343;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1341019 1341088 . - 0 ID=Thaps6343;Parent=Thaps6343;rank=1 chr6 . exon 1341019 1341088 . - . ID=Thaps6343.1;Parent=Thaps6343;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1341827 1342839 . + . ID=Thaps6344;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C692];external_name=Thaps6344;logic_name=jgi_thaps3 chr6 ensembl transcript 1341827 1342839 . + . ID=Thaps6344;Parent=Thaps6344;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1341827 1341999 . + 0 ID=Thaps6344;Parent=Thaps6344;rank=1 chr6 . exon 1341827 1341999 . + . ID=Thaps6344.1;Parent=Thaps6344;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1342091 1342470 . + 0 ID=Thaps6344;Parent=Thaps6344;rank=2 chr6 . exon 1342091 1342470 . + . ID=Thaps6344.2;Parent=Thaps6344;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1342556 1342839 . + 0 ID=Thaps6344;Parent=Thaps6344;rank=3 chr6 . exon 1342556 1342839 . + . ID=Thaps6344.3;Parent=Thaps6344;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . repeat_region 1345144 1345189 . ? . description=dust chr6 . repeat_region 1351019 1351078 . ? . description=dust chr6 ensembl protein_coding_gene 1345612 1350692 . - . ID=Thaps23199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C693];external_name=Thaps23199;logic_name=jgi_thaps3 chr6 ensembl transcript 1345612 1350692 . - . ID=Thaps23199;Parent=Thaps23199;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1345612 1347284 . - 0 ID=Thaps23199;Parent=Thaps23199;rank=3 chr6 . exon 1345612 1347284 . - . ID=Thaps23199.3;Parent=Thaps23199;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1347656 1350139 . - 0 ID=Thaps23199;Parent=Thaps23199;rank=2 chr6 . exon 1347656 1350139 . - . ID=Thaps23199.2;Parent=Thaps23199;constitutive=1;rank=2 chr6 . CDS 1350170 1350692 . - 0 ID=Thaps23199;Parent=Thaps23199;rank=1 chr6 . exon 1350170 1350692 . - . ID=Thaps23199.1;Parent=Thaps23199;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1351523 1352035 . + . ID=Thaps34714;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C694];external_name=Thaps34714;logic_name=jgi_thaps3 chr6 ensembl transcript 1351523 1352035 . + . ID=Thaps34714;Parent=Thaps34714;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1351523 1352035 . + 0 ID=Thaps34714;Parent=Thaps34714;rank=1 chr6 . exon 1351523 1352035 . + . ID=Thaps34714.1;Parent=Thaps34714;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1352324 1355251 . + . ID=Thaps41117;biotype=protein_coding;description=RNA splicing factor [Source:UniProtKB/TrEMBL%3BAcc:B8C695];external_name=Thaps41117;logic_name=jgi_thaps3 chr6 ensembl transcript 1352324 1355251 . + . ID=Thaps41117;Parent=Thaps41117;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1352324 1352510 . + 0 ID=Thaps41117;Parent=Thaps41117;rank=1 chr6 . exon 1352324 1352510 . + . ID=Thaps41117.1;Parent=Thaps41117;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1352631 1355251 . + 0 ID=Thaps41117;Parent=Thaps41117;rank=2 chr6 . exon 1352631 1355251 . + . ID=Thaps41117.2;Parent=Thaps41117;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . repeat_region 1356701 1356744 . ? . description=trf chr6 ensembl protein_coding_gene 1355281 1356935 . - . ID=Thaps23201;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C696];external_name=Thaps23201;logic_name=jgi_thaps3 chr6 ensembl transcript 1355281 1356935 . - . ID=Thaps23201;Parent=Thaps23201;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1355281 1355758 . - 0 ID=Thaps23201;Parent=Thaps23201;rank=3 chr6 . exon 1355281 1355758 . - . ID=Thaps23201.3;Parent=Thaps23201;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1355847 1355992 . - 0 ID=Thaps23201;Parent=Thaps23201;rank=2 chr6 . exon 1355847 1355992 . - . ID=Thaps23201.2;Parent=Thaps23201;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1356078 1356935 . - 0 ID=Thaps23201;Parent=Thaps23201;rank=1 chr6 . exon 1356078 1356935 . - . ID=Thaps23201.1;Parent=Thaps23201;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1360072 1361397 . - . ID=Thaps23202;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C425];external_name=Thaps23202;logic_name=jgi_thaps3 chr6 ensembl transcript 1360072 1361397 . - . ID=Thaps23202;Parent=Thaps23202;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1360072 1361397 . - 0 ID=Thaps23202;Parent=Thaps23202;rank=1 chr6 . exon 1360072 1361397 . - . ID=Thaps23202.1;Parent=Thaps23202;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1362872 1363690 . - . ID=Thaps34594;biotype=protein_coding;description=Glycosylase [Source:UniProtKB/TrEMBL%3BAcc:B8C427];external_name=UNG;logic_name=jgi_thaps3 chr6 ensembl transcript 1362872 1363690 . - . ID=Thaps34594;Parent=Thaps34594;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1362872 1363690 . - 0 ID=Thaps34594;Parent=Thaps34594;rank=1 chr6 . exon 1362872 1363690 . - . ID=Thaps34594.1;Parent=Thaps34594;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1361668 1362690 . + . ID=Thaps41122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C426];external_name=Thaps41122;logic_name=jgi_thaps3 chr6 ensembl transcript 1361668 1362690 . + . ID=Thaps41122;Parent=Thaps41122;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1361668 1362690 . + 0 ID=Thaps41122;Parent=Thaps41122;rank=1 chr6 . exon 1361668 1362690 . + . ID=Thaps41122.1;Parent=Thaps41122;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1357416 1358036 . + . ID=Thaps6348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C424];external_name=Thaps6348;logic_name=jgi_thaps3 chr6 ensembl transcript 1357416 1358036 . + . ID=Thaps6348;Parent=Thaps6348;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1357416 1358036 . + 0 ID=Thaps6348;Parent=Thaps6348;rank=1 chr6 . exon 1357416 1358036 . + . ID=Thaps6348.1;Parent=Thaps6348;constitutive=1;rank=1 chr6 . repeat_region 1370839 1370880 . ? . description=dust chr6 . repeat_region 1372577 1372587 . ? . description=dust chr6 ensembl protein_coding_gene 1368204 1370293 . - . ID=Thaps13482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C430];external_name=Thaps13482;logic_name=jgi_thaps3 chr6 ensembl transcript 1368204 1370293 . - . ID=Thaps13482;Parent=Thaps13482;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1368204 1368755 . - 0 ID=Thaps13482;Parent=Thaps13482;rank=4 chr6 . exon 1368204 1368755 . - . ID=Thaps13482.4;Parent=Thaps13482;constitutive=1;rank=4 chr6 . CDS 1368856 1369108 . - 0 ID=Thaps13482;Parent=Thaps13482;rank=3 chr6 . exon 1368856 1369108 . - . ID=Thaps13482.3;Parent=Thaps13482;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1369201 1369739 . - 0 ID=Thaps13482;Parent=Thaps13482;rank=2 chr6 . exon 1369201 1369739 . - . ID=Thaps13482.2;Parent=Thaps13482;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1369838 1370293 . - 0 ID=Thaps13482;Parent=Thaps13482;rank=1 chr6 . exon 1369838 1370293 . - . ID=Thaps13482.1;Parent=Thaps13482;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1366045 1367592 . - . ID=Thaps23205;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C429];external_name=Thaps23205;logic_name=jgi_thaps3 chr6 ensembl transcript 1366045 1367592 . - . ID=Thaps23205;Parent=Thaps23205;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1366045 1367592 . - 0 ID=Thaps23205;Parent=Thaps23205;rank=1 chr6 . exon 1366045 1367592 . - . ID=Thaps23205.1;Parent=Thaps23205;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1365219 1365833 . + . ID=Thaps35055;biotype=protein_coding;description=Adenylyl-sulfate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C428];external_name=ASK1;logic_name=jgi_thaps3 chr6 ensembl transcript 1365219 1365833 . + . ID=Thaps35055;Parent=Thaps35055;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1365219 1365833 . + 0 ID=Thaps35055;Parent=Thaps35055;rank=1 chr6 . exon 1365219 1365833 . + . ID=Thaps35055.1;Parent=Thaps35055;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1370824 1371627 . + . ID=Thaps6356;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C431];external_name=Thaps6356;logic_name=jgi_thaps3 chr6 ensembl transcript 1370824 1371627 . + . ID=Thaps6356;Parent=Thaps6356;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1370824 1371266 . + 0 ID=Thaps6356;Parent=Thaps6356;rank=1 chr6 . exon 1370824 1371266 . + . ID=Thaps6356.1;Parent=Thaps6356;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1371357 1371627 . + 0 ID=Thaps6356;Parent=Thaps6356;rank=2 chr6 . exon 1371357 1371627 . + . ID=Thaps6356.2;Parent=Thaps6356;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1372787 1375507 . + . ID=Thaps6357;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C432];external_name=Thaps6357;logic_name=jgi_thaps3 chr6 ensembl transcript 1372787 1375507 . + . ID=Thaps6357;Parent=Thaps6357;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1372787 1373945 . + 0 ID=Thaps6357;Parent=Thaps6357;rank=1 chr6 . exon 1372787 1373945 . + . ID=Thaps6357.1;Parent=Thaps6357;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1374025 1374416 . + 0 ID=Thaps6357;Parent=Thaps6357;rank=2 chr6 . exon 1374025 1374416 . + . ID=Thaps6357.2;Parent=Thaps6357;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1374488 1374737 . + 0 ID=Thaps6357;Parent=Thaps6357;rank=3 chr6 . CDS 1374860 1374907 . + 0 ID=Thaps6357;Parent=Thaps6357;rank=4 chr6 . CDS 1374983 1375042 . + 0 ID=Thaps6357;Parent=Thaps6357;rank=5 chr6 . CDS 1375167 1375507 . + 0 ID=Thaps6357;Parent=Thaps6357;rank=6 chr6 ensembl protein_coding_gene 1375741 1383174 . - . ID=Thaps23207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C433];external_name=Thaps23207;logic_name=jgi_thaps3 chr6 ensembl transcript 1375741 1383174 . - . ID=Thaps23207;Parent=Thaps23207;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1375741 1376415 . - 0 ID=Thaps23207;Parent=Thaps23207;rank=4 chr6 . exon 1375741 1376415 . - . ID=Thaps23207.4;Parent=Thaps23207;constitutive=1;rank=4 chr6 . CDS 1376495 1377271 . - 0 ID=Thaps23207;Parent=Thaps23207;rank=3 chr6 . exon 1376495 1377271 . - . ID=Thaps23207.3;Parent=Thaps23207;constitutive=1;rank=3 chr6 . CDS 1377347 1378043 . - 0 ID=Thaps23207;Parent=Thaps23207;rank=2 chr6 . exon 1377347 1378043 . - . ID=Thaps23207.2;Parent=Thaps23207;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1378127 1383174 . - 0 ID=Thaps23207;Parent=Thaps23207;rank=1 chr6 . exon 1378127 1383174 . - . ID=Thaps23207.1;Parent=Thaps23207;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . exon 1374488 1374737 . + . ID=Thaps6357.3;Parent=Thaps6357;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . exon 1374860 1374907 . + . ID=Thaps6357.4;Parent=Thaps6357;constitutive=1;rank=4 chr6 . exon 1374983 1375042 . + . ID=Thaps6357.5;Parent=Thaps6357;constitutive=1;rank=5 chr6 . exon 1375167 1375507 . + . ID=Thaps6357.6;Parent=Thaps6357;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . repeat_region 1391396 1391430 . ? . description=trf chr6 ensembl protein_coding_gene 1391972 1393435 . + . ID=Thaps23208;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C437];external_name=Thaps23208;logic_name=jgi_thaps3 chr6 ensembl transcript 1391972 1393435 . + . ID=Thaps23208;Parent=Thaps23208;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1391972 1392170 . + 0 ID=Thaps23208;Parent=Thaps23208;rank=1 chr6 . exon 1391972 1392170 . + . ID=Thaps23208.1;Parent=Thaps23208;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1392287 1392477 . + 0 ID=Thaps23208;Parent=Thaps23208;rank=2 chr6 . exon 1392287 1392477 . + . ID=Thaps23208.2;Parent=Thaps23208;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1392587 1393435 . + 0 ID=Thaps23208;Parent=Thaps23208;rank=3 chr6 . exon 1392587 1393435 . + . ID=Thaps23208.3;Parent=Thaps23208;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1385823 1387104 . - . ID=Thaps6359;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C434];external_name=Thaps6359;logic_name=jgi_thaps3 chr6 ensembl transcript 1385823 1387104 . - . ID=Thaps6359;Parent=Thaps6359;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1385823 1386126 . - 0 ID=Thaps6359;Parent=Thaps6359;rank=2 chr6 . exon 1385823 1386126 . - . ID=Thaps6359.2;Parent=Thaps6359;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1386206 1387104 . - 0 ID=Thaps6359;Parent=Thaps6359;rank=1 chr6 . exon 1386206 1387104 . - . ID=Thaps6359.1;Parent=Thaps6359;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1387719 1388639 . + . ID=Thaps6360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C435];external_name=Thaps6360;logic_name=jgi_thaps3 chr6 ensembl transcript 1387719 1388639 . + . ID=Thaps6360;Parent=Thaps6360;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1387719 1388639 . + 0 ID=Thaps6360;Parent=Thaps6360;rank=1 chr6 . exon 1387719 1388639 . + . ID=Thaps6360.1;Parent=Thaps6360;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1388876 1391024 . - . ID=Thaps6361;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C436];external_name=Thaps6361;logic_name=jgi_thaps3 chr6 ensembl transcript 1388876 1391024 . - . ID=Thaps6361;Parent=Thaps6361;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1388876 1389051 . - 0 ID=Thaps6361;Parent=Thaps6361;rank=5 chr6 . exon 1388876 1389051 . - . ID=Thaps6361.5;Parent=Thaps6361;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1389138 1389347 . - 0 ID=Thaps6361;Parent=Thaps6361;rank=4 chr6 . exon 1389138 1389347 . - . ID=Thaps6361.4;Parent=Thaps6361;constitutive=1;rank=4 chr6 . CDS 1389431 1390373 . - 0 ID=Thaps6361;Parent=Thaps6361;rank=3 chr6 . exon 1389431 1390373 . - . ID=Thaps6361.3;Parent=Thaps6361;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1390483 1390553 . - 0 ID=Thaps6361;Parent=Thaps6361;rank=2 chr6 . exon 1390483 1390553 . - . ID=Thaps6361.2;Parent=Thaps6361;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1390628 1391024 . - 0 ID=Thaps6361;Parent=Thaps6361;rank=1 chr6 . exon 1390628 1391024 . - . ID=Thaps6361.1;Parent=Thaps6361;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1393972 1394798 . - . ID=Thaps6363;biotype=protein_coding;description=RL23a%2C ribosomal protein 23a 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C438];external_name=RL23A;logic_name=jgi_thaps3 chr6 ensembl transcript 1393972 1394798 . - . ID=Thaps6363;Parent=Thaps6363;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1393972 1394387 . - 0 ID=Thaps6363;Parent=Thaps6363;rank=2 chr6 . exon 1393972 1394387 . - . ID=Thaps6363.2;Parent=Thaps6363;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1394786 1394798 . - 0 ID=Thaps6363;Parent=Thaps6363;rank=1 chr6 . repeat_region 1402622 1402671 . ? . description=dust chr6 ensembl protein_coding_gene 1395217 1396038 . - . ID=Thaps23209;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C439];external_name=Thaps23209;logic_name=jgi_thaps3 chr6 ensembl transcript 1395217 1396038 . - . ID=Thaps23209;Parent=Thaps23209;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1395217 1396038 . - 0 ID=Thaps23209;Parent=Thaps23209;rank=1 chr6 . exon 1395217 1396038 . - . ID=Thaps23209.1;Parent=Thaps23209;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1397383 1399214 . - . ID=Thaps23210;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C441];external_name=Thaps23210;logic_name=jgi_thaps3 chr6 ensembl transcript 1397383 1399214 . - . ID=Thaps23210;Parent=Thaps23210;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1397383 1398411 . - 0 ID=Thaps23210;Parent=Thaps23210;rank=3 chr6 . exon 1397383 1398411 . - . ID=Thaps23210.3;Parent=Thaps23210;constitutive=1;rank=3 chr6 . CDS 1398511 1398741 . - 0 ID=Thaps23210;Parent=Thaps23210;rank=2 chr6 . exon 1398511 1398741 . - . ID=Thaps23210.2;Parent=Thaps23210;constitutive=1;rank=2 chr6 . CDS 1398825 1399214 . - 0 ID=Thaps23210;Parent=Thaps23210;rank=1 chr6 . exon 1398825 1399214 . - . ID=Thaps23210.1;Parent=Thaps23210;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1401050 1404691 . - . ID=Thaps262956;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C442];external_name=Thaps262956;logic_name=jgi_thaps3 chr6 ensembl transcript 1401050 1404691 . - . ID=Thaps262956;Parent=Thaps262956;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1401050 1401148 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=10 chr6 . exon 1401050 1401148 . - . ID=Thaps262956.10;Parent=Thaps262956;constitutive=1;rank=10 chr6 . CDS 1401215 1401952 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=9 chr6 . exon 1401215 1401952 . - . ID=Thaps262956.9;Parent=Thaps262956;constitutive=1;rank=9 chr6 . CDS 1402036 1402214 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=8 chr6 . exon 1402036 1402214 . - . ID=Thaps262956.8;Parent=Thaps262956;constitutive=1;ensembl_end_phase=2;rank=8 chr6 . CDS 1402292 1402602 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=7 chr6 . exon 1402292 1402602 . - . ID=Thaps262956.7;Parent=Thaps262956;constitutive=1;ensembl_end_phase=2;rank=7 chr6 . CDS 1402710 1403189 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=6 chr6 . exon 1402710 1403189 . - . ID=Thaps262956.6;Parent=Thaps262956;constitutive=1;rank=6 chr6 . CDS 1403290 1403349 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=5 chr6 . exon 1403290 1403349 . - . ID=Thaps262956.5;Parent=Thaps262956;constitutive=1;rank=5 chr6 . CDS 1403379 1403603 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=4 chr6 . exon 1403379 1403603 . - . ID=Thaps262956.4;Parent=Thaps262956;constitutive=1;rank=4 chr6 . CDS 1403631 1404420 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=3 chr6 . exon 1403631 1404420 . - . ID=Thaps262956.3;Parent=Thaps262956;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1404501 1404531 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=2 chr6 . CDS 1404575 1404691 . - 0 ID=Thaps262956;Parent=Thaps262956;rank=1 chr6 . exon 1394786 1394798 . - . ID=Thaps6363.1;Parent=Thaps6363;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1396386 1397151 . + . ID=Thaps6365;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C440];external_name=Thaps6365;logic_name=jgi_thaps3 chr6 ensembl transcript 1396386 1397151 . + . ID=Thaps6365;Parent=Thaps6365;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1396386 1396698 . + 0 ID=Thaps6365;Parent=Thaps6365;rank=1 chr6 . exon 1396386 1396698 . + . ID=Thaps6365.1;Parent=Thaps6365;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1396784 1397151 . + 0 ID=Thaps6365;Parent=Thaps6365;rank=2 chr6 . exon 1396784 1397151 . + . ID=Thaps6365.2;Parent=Thaps6365;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1407354 1409024 . - . ID=Thaps13806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C444];external_name=Thaps13806;logic_name=jgi_thaps3 chr6 ensembl transcript 1407354 1409024 . - . ID=Thaps13806;Parent=Thaps13806;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1407354 1408633 . - 0 ID=Thaps13806;Parent=Thaps13806;rank=2 chr6 . exon 1407354 1408633 . - . ID=Thaps13806.2;Parent=Thaps13806;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1408691 1409024 . - 0 ID=Thaps13806;Parent=Thaps13806;rank=1 chr6 . exon 1408691 1409024 . - . ID=Thaps13806.1;Parent=Thaps13806;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1412661 1413777 . - . ID=Thaps23212;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C446];external_name=Thaps23212;logic_name=jgi_thaps3 chr6 ensembl transcript 1412661 1413777 . - . ID=Thaps23212;Parent=Thaps23212;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1412661 1412814 . - 0 ID=Thaps23212;Parent=Thaps23212;rank=2 chr6 . exon 1412661 1412814 . - . ID=Thaps23212.2;Parent=Thaps23212;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1412981 1413777 . - 0 ID=Thaps23212;Parent=Thaps23212;rank=1 chr6 . exon 1412981 1413777 . - . ID=Thaps23212.1;Parent=Thaps23212;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . exon 1404501 1404531 . - . ID=Thaps262956.2;Parent=Thaps262956;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . exon 1404575 1404691 . - . ID=Thaps262956.1;Parent=Thaps262956;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1405976 1406371 . - . ID=Thaps35180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C443];external_name=Thaps35180;logic_name=jgi_thaps3 chr6 ensembl transcript 1405976 1406371 . - . ID=Thaps35180;Parent=Thaps35180;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1405976 1406371 . - 0 ID=Thaps35180;Parent=Thaps35180;rank=1 chr6 . exon 1405976 1406371 . - . ID=Thaps35180.1;Parent=Thaps35180;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1411711 1412619 . + . ID=Thaps6368;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C445];external_name=Thaps6368;logic_name=jgi_thaps3 chr6 ensembl transcript 1411711 1412619 . + . ID=Thaps6368;Parent=Thaps6368;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1411711 1412619 . + 0 ID=Thaps6368;Parent=Thaps6368;rank=1 chr6 . exon 1411711 1412619 . + . ID=Thaps6368.1;Parent=Thaps6368;constitutive=1;rank=1 chr6 . repeat_region 1417267 1417309 . ? . description=trf chr6 ensembl protein_coding_gene 1418511 1419839 . - . ID=Thaps269147;biotype=protein_coding;external_name=Thaps269147;logic_name=jgi_thaps3 chr6 ensembl transcript 1418511 1419839 . - . ID=Thaps269147;Parent=Thaps269147;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1418511 1419263 . - 0 ID=Thaps269147;Parent=Thaps269147;rank=3 chr6 . exon 1418511 1419263 . - . ID=Thaps269147.3;Parent=Thaps269147;constitutive=1;rank=3 chr6 . CDS 1419341 1419346 . - 0 ID=Thaps269147;Parent=Thaps269147;rank=2 chr6 . exon 1419341 1419346 . - . ID=Thaps269147.2;Parent=Thaps269147;constitutive=1;rank=2 chr6 . CDS 1419375 1419839 . - 0 ID=Thaps269147;Parent=Thaps269147;rank=1 chr6 . exon 1419375 1419839 . - . ID=Thaps269147.1;Parent=Thaps269147;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1414633 1416411 . + . ID=Thaps6370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C447];external_name=Thaps6370;logic_name=jgi_thaps3 chr6 ensembl transcript 1414633 1416411 . + . ID=Thaps6370;Parent=Thaps6370;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1414633 1414663 . + 0 ID=Thaps6370;Parent=Thaps6370;rank=1 chr6 . exon 1414633 1414663 . + . ID=Thaps6370.1;Parent=Thaps6370;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1414690 1414990 . + 0 ID=Thaps6370;Parent=Thaps6370;rank=2 chr6 . exon 1414690 1414990 . + . ID=Thaps6370.2;Parent=Thaps6370;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1415207 1415217 . + 0 ID=Thaps6370;Parent=Thaps6370;rank=3 chr6 . exon 1415207 1415217 . + . ID=Thaps6370.3;Parent=Thaps6370;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1415678 1416411 . + 0 ID=Thaps6370;Parent=Thaps6370;rank=4 chr6 . exon 1415678 1416411 . + . ID=Thaps6370.4;Parent=Thaps6370;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 1420686 1422641 . - . ID=Thaps6372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C449];external_name=Thaps6372;logic_name=jgi_thaps3 chr6 ensembl transcript 1420686 1422641 . - . ID=Thaps6372;Parent=Thaps6372;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1420686 1421397 . - 0 ID=Thaps6372;Parent=Thaps6372;rank=4 chr6 . exon 1420686 1421397 . - . ID=Thaps6372.4;Parent=Thaps6372;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1421478 1422078 . - 0 ID=Thaps6372;Parent=Thaps6372;rank=3 chr6 . exon 1421478 1422078 . - . ID=Thaps6372.3;Parent=Thaps6372;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1422172 1422244 . - 0 ID=Thaps6372;Parent=Thaps6372;rank=2 chr6 . exon 1422172 1422244 . - . ID=Thaps6372.2;Parent=Thaps6372;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1422339 1422641 . - 0 ID=Thaps6372;Parent=Thaps6372;rank=1 chr6 . exon 1422339 1422641 . - . ID=Thaps6372.1;Parent=Thaps6372;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1423000 1423593 . - . ID=Thaps6373;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C450];external_name=Thaps6373;logic_name=jgi_thaps3 chr6 ensembl transcript 1423000 1423593 . - . ID=Thaps6373;Parent=Thaps6373;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1423000 1423593 . - 0 ID=Thaps6373;Parent=Thaps6373;rank=1 chr6 . exon 1423000 1423593 . - . ID=Thaps6373.1;Parent=Thaps6373;constitutive=1;rank=1 chr6 . repeat_region 1429241 1429292 . ? . description=dust chr6 ensembl protein_coding_gene 1424809 1425543 . - . ID=Thaps15916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C451];external_name=Thaps15916;logic_name=jgi_thaps3 chr6 ensembl transcript 1424809 1425543 . - . ID=Thaps15916;Parent=Thaps15916;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1424809 1425543 . - 0 ID=Thaps15916;Parent=Thaps15916;rank=1 chr6 . exon 1424809 1425543 . - . ID=Thaps15916.1;Parent=Thaps15916;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1428592 1429164 . - . ID=Thaps34629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C454];external_name=Thaps34629;logic_name=jgi_thaps3 chr6 ensembl transcript 1428592 1429164 . - . ID=Thaps34629;Parent=Thaps34629;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1428592 1429164 . - 0 ID=Thaps34629;Parent=Thaps34629;rank=1 chr6 . exon 1428592 1429164 . - . ID=Thaps34629.1;Parent=Thaps34629;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1426806 1427484 . - . ID=Thaps6375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C452];external_name=Thaps6375;logic_name=jgi_thaps3 chr6 ensembl transcript 1426806 1427484 . - . ID=Thaps6375;Parent=Thaps6375;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1426806 1427163 . - 0 ID=Thaps6375;Parent=Thaps6375;rank=2 chr6 . exon 1426806 1427163 . - . ID=Thaps6375.2;Parent=Thaps6375;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1427357 1427484 . - 0 ID=Thaps6375;Parent=Thaps6375;rank=1 chr6 . exon 1427357 1427484 . - . ID=Thaps6375.1;Parent=Thaps6375;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1427624 1428280 . + . ID=Thaps6376;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C453];external_name=Thaps6376;logic_name=jgi_thaps3 chr6 ensembl transcript 1427624 1428280 . + . ID=Thaps6376;Parent=Thaps6376;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1427624 1428280 . + 0 ID=Thaps6376;Parent=Thaps6376;rank=1 chr6 . exon 1427624 1428280 . + . ID=Thaps6376.1;Parent=Thaps6376;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1430206 1433833 . + . ID=Thaps6378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C455];external_name=Thaps6378;logic_name=jgi_thaps3 chr6 ensembl transcript 1430206 1433833 . + . ID=Thaps6378;Parent=Thaps6378;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1430206 1430221 . + 0 ID=Thaps6378;Parent=Thaps6378;rank=1 chr6 . exon 1430206 1430221 . + . ID=Thaps6378.1;Parent=Thaps6378;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1430286 1432830 . + 0 ID=Thaps6378;Parent=Thaps6378;rank=2 chr6 . exon 1430286 1432830 . + . ID=Thaps6378.2;Parent=Thaps6378;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1432916 1432976 . + 0 ID=Thaps6378;Parent=Thaps6378;rank=3 chr6 . exon 1432916 1432976 . + . ID=Thaps6378.3;Parent=Thaps6378;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1433135 1433573 . + 0 ID=Thaps6378;Parent=Thaps6378;rank=4 chr6 . exon 1433135 1433573 . + . ID=Thaps6378.4;Parent=Thaps6378;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1433652 1433833 . + 0 ID=Thaps6378;Parent=Thaps6378;rank=5 chr6 . exon 1433652 1433833 . + . ID=Thaps6378.5;Parent=Thaps6378;constitutive=1;ensembl_end_phase=2;rank=5 chr6 ensembl protein_coding_gene 1434140 1435603 . - . ID=Thaps6379;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C456];external_name=Thaps6379;logic_name=jgi_thaps3 chr6 ensembl transcript 1434140 1435603 . - . ID=Thaps6379;Parent=Thaps6379;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1434140 1434849 . - 0 ID=Thaps6379;Parent=Thaps6379;rank=2 chr6 . exon 1434140 1434849 . - . ID=Thaps6379.2;Parent=Thaps6379;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1434958 1435603 . - 0 ID=Thaps6379;Parent=Thaps6379;rank=1 chr6 ensembl protein_coding_gene 1444076 1446042 . - . ID=Thaps23215;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C462];external_name=Thaps23215;logic_name=jgi_thaps3 chr6 ensembl transcript 1444076 1446042 . - . ID=Thaps23215;Parent=Thaps23215;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1444076 1444611 . - 0 ID=Thaps23215;Parent=Thaps23215;rank=2 chr6 . exon 1444076 1444611 . - . ID=Thaps23215.2;Parent=Thaps23215;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1444710 1446042 . - 0 ID=Thaps23215;Parent=Thaps23215;rank=1 chr6 ensembl protein_coding_gene 1437538 1438888 . - . ID=Thaps262960;biotype=protein_coding;description=Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL%3BAcc:B8C458];external_name=Thaps262960;logic_name=jgi_thaps3 chr6 ensembl transcript 1437538 1438888 . - . ID=Thaps262960;Parent=Thaps262960;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1437538 1438119 . - 0 ID=Thaps262960;Parent=Thaps262960;rank=3 chr6 . exon 1437538 1438119 . - . ID=Thaps262960.3;Parent=Thaps262960;constitutive=1;rank=3 chr6 . CDS 1438207 1438236 . - 0 ID=Thaps262960;Parent=Thaps262960;rank=2 chr6 . exon 1438207 1438236 . - . ID=Thaps262960.2;Parent=Thaps262960;constitutive=1;rank=2 chr6 . CDS 1438324 1438888 . - 0 ID=Thaps262960;Parent=Thaps262960;rank=1 chr6 . exon 1438324 1438888 . - . ID=Thaps262960.1;Parent=Thaps262960;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1439512 1440922 . - . ID=Thaps34809;biotype=protein_coding;description=3-ketoacyl-coa thiolase%2C mitochondrial [Source:UniProtKB/TrEMBL%3BAcc:B8C459];external_name=KCT1;logic_name=jgi_thaps3 chr6 ensembl transcript 1439512 1440922 . - . ID=Thaps34809;Parent=Thaps34809;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1439512 1440060 . - 0 ID=Thaps34809;Parent=Thaps34809;rank=3 chr6 . exon 1439512 1440060 . - . ID=Thaps34809.3;Parent=Thaps34809;constitutive=1;rank=3 chr6 . CDS 1440153 1440266 . - 0 ID=Thaps34809;Parent=Thaps34809;rank=2 chr6 . exon 1440153 1440266 . - . ID=Thaps34809.2;Parent=Thaps34809;constitutive=1;rank=2 chr6 . CDS 1440395 1440922 . - 0 ID=Thaps34809;Parent=Thaps34809;rank=1 chr6 . exon 1440395 1440922 . - . ID=Thaps34809.1;Parent=Thaps34809;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1442461 1442835 . - . ID=Thaps34864;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C461];external_name=Thaps34864;logic_name=jgi_thaps3 chr6 ensembl transcript 1442461 1442835 . - . ID=Thaps34864;Parent=Thaps34864;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1442461 1442602 . - 0 ID=Thaps34864;Parent=Thaps34864;rank=2 chr6 . exon 1442461 1442602 . - . ID=Thaps34864.2;Parent=Thaps34864;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1442678 1442835 . - 0 ID=Thaps34864;Parent=Thaps34864;rank=1 chr6 . exon 1442678 1442835 . - . ID=Thaps34864.1;Parent=Thaps34864;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . exon 1434958 1435603 . - . ID=Thaps6379.1;Parent=Thaps6379;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1436011 1437237 . + . ID=Thaps6380;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C457];external_name=Thaps6380;logic_name=jgi_thaps3 chr6 ensembl transcript 1436011 1437237 . + . ID=Thaps6380;Parent=Thaps6380;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1436011 1437237 . + 0 ID=Thaps6380;Parent=Thaps6380;rank=1 chr6 . exon 1436011 1437237 . + . ID=Thaps6380.1;Parent=Thaps6380;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1441604 1442155 . + . ID=Thaps6383;biotype=protein_coding;description=19kDa subunit of RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8C460];external_name=Thaps6383;logic_name=jgi_thaps3 chr6 ensembl transcript 1441604 1442155 . + . ID=Thaps6383;Parent=Thaps6383;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1441604 1442155 . + 0 ID=Thaps6383;Parent=Thaps6383;rank=1 chr6 . exon 1441604 1442155 . + . ID=Thaps6383.1;Parent=Thaps6383;constitutive=1;rank=1 chr6 . repeat_region 1446050 1446085 . ? . description=trf chr6 . repeat_region 1446051 1446087 . ? . description=trf chr6 . repeat_region 1446051 1446087 . ? . description=dust chr6 . repeat_region 1448692 1448704 . ? . description=dust chr6 . repeat_region 1449569 1449615 . ? . description=dust chr6 . repeat_region 1449572 1449615 . ? . description=trf chr6 . exon 1444710 1446042 . - . ID=Thaps23215.1;Parent=Thaps23215;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1446712 1448292 . + . ID=Thaps23216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C463];external_name=Thaps23216;logic_name=jgi_thaps3 chr6 ensembl transcript 1446712 1448292 . + . ID=Thaps23216;Parent=Thaps23216;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1446712 1448292 . + 0 ID=Thaps23216;Parent=Thaps23216;rank=1 chr6 . exon 1446712 1448292 . + . ID=Thaps23216.1;Parent=Thaps23216;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1448643 1451740 . + . ID=Thaps23217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C464];external_name=Thaps23217;logic_name=jgi_thaps3 chr6 ensembl transcript 1448643 1451740 . + . ID=Thaps23217;Parent=Thaps23217;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1448643 1449475 . + 0 ID=Thaps23217;Parent=Thaps23217;rank=1 chr6 . exon 1448643 1449475 . + . ID=Thaps23217.1;Parent=Thaps23217;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1449511 1451740 . + 0 ID=Thaps23217;Parent=Thaps23217;rank=2 chr6 . exon 1449511 1451740 . + . ID=Thaps23217.2;Parent=Thaps23217;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1451819 1452410 . - . ID=Thaps262963;biotype=protein_coding;description=Thiaminephosphate pyrophosphorylase thiamine phosphate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C465];external_name=Thaps262963;logic_name=jgi_thaps3 chr6 ensembl transcript 1451819 1452410 . - . ID=Thaps262963;Parent=Thaps262963;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1451819 1452154 . - 0 ID=Thaps262963;Parent=Thaps262963;rank=2 chr6 . exon 1451819 1452154 . - . ID=Thaps262963.2;Parent=Thaps262963;constitutive=1;rank=2 chr6 . CDS 1452167 1452410 . - 0 ID=Thaps262963;Parent=Thaps262963;rank=1 chr6 . exon 1452167 1452410 . - . ID=Thaps262963.1;Parent=Thaps262963;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1452563 1453607 . - . ID=Thaps262964;biotype=protein_coding;description=Probable thiamin biosynthetic enzyme [Source:UniProtKB/TrEMBL%3BAcc:B8C466];external_name=Thaps262964;logic_name=jgi_thaps3 chr6 ensembl transcript 1452563 1453607 . - . ID=Thaps262964;Parent=Thaps262964;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1452563 1452587 . - 0 ID=Thaps262964;Parent=Thaps262964;rank=4 chr6 . exon 1452563 1452587 . - . ID=Thaps262964.4;Parent=Thaps262964;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1452660 1452739 . - 0 ID=Thaps262964;Parent=Thaps262964;rank=3 chr6 . exon 1452660 1452739 . - . ID=Thaps262964.3;Parent=Thaps262964;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1452788 1452886 . - 0 ID=Thaps262964;Parent=Thaps262964;rank=2 chr6 . exon 1452788 1452886 . - . ID=Thaps262964.2;Parent=Thaps262964;constitutive=1;rank=2 chr6 . CDS 1453016 1453607 . - 0 ID=Thaps262964;Parent=Thaps262964;rank=1 chr6 . exon 1453016 1453607 . - . ID=Thaps262964.1;Parent=Thaps262964;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1454080 1455687 . + . ID=Thaps6389;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C467];external_name=Thaps6389;logic_name=jgi_thaps3 chr6 ensembl transcript 1454080 1455687 . + . ID=Thaps6389;Parent=Thaps6389;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1454080 1455179 . + 0 ID=Thaps6389;Parent=Thaps6389;rank=1 chr6 . exon 1454080 1455179 . + . ID=Thaps6389.1;Parent=Thaps6389;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1455267 1455687 . + 0 ID=Thaps6389;Parent=Thaps6389;rank=2 chr6 ensembl protein_coding_gene 1456398 1460277 . - . ID=Thaps23218;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C468];external_name=Thaps23218;logic_name=jgi_thaps3 chr6 ensembl transcript 1456398 1460277 . - . ID=Thaps23218;Parent=Thaps23218;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1456398 1456409 . - 0 ID=Thaps23218;Parent=Thaps23218;rank=3 chr6 . exon 1456398 1456409 . - . ID=Thaps23218.3;Parent=Thaps23218;constitutive=1;rank=3 chr6 . CDS 1456553 1457037 . - 0 ID=Thaps23218;Parent=Thaps23218;rank=2 chr6 . exon 1456553 1457037 . - . ID=Thaps23218.2;Parent=Thaps23218;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1457289 1460277 . - 0 ID=Thaps23218;Parent=Thaps23218;rank=1 chr6 . exon 1457289 1460277 . - . ID=Thaps23218.1;Parent=Thaps23218;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl gene 1461399 1462043 . + . ID=Thaps262965;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr6 ensembl transcript 1461399 1462043 . + . ID=Thaps262965;Parent=Thaps262965;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr6 . exon 1461399 1461483 . + . ID=Thaps262965.1;Parent=Thaps262965;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . exon 1461724 1462043 . + . ID=Thaps262965.2;Parent=Thaps262965;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1462484 1465396 . + . ID=Thaps269148;biotype=protein_coding;description=Translation factor tu domain 2 [Source:UniProtKB/TrEMBL%3BAcc:B8C469];external_name=Thaps269148;logic_name=jgi_thaps3 chr6 ensembl transcript 1462484 1465396 . + . ID=Thaps269148;Parent=Thaps269148;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1462484 1462486 . + 0 ID=Thaps269148;Parent=Thaps269148;rank=1 chr6 . exon 1462484 1462486 . + . ID=Thaps269148.1;Parent=Thaps269148;constitutive=1;rank=1 chr6 . CDS 1462811 1463068 . + 0 ID=Thaps269148;Parent=Thaps269148;rank=2 chr6 . exon 1462811 1463068 . + . ID=Thaps269148.2;Parent=Thaps269148;constitutive=1;rank=2 chr6 . CDS 1463150 1465396 . + 0 ID=Thaps269148;Parent=Thaps269148;rank=3 chr6 . exon 1463150 1465396 . + . ID=Thaps269148.3;Parent=Thaps269148;constitutive=1;rank=3 chr6 . exon 1455267 1455687 . + . ID=Thaps6389.2;Parent=Thaps6389;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . repeat_region 1472992 1473024 . ? . description=dust chr6 ensembl protein_coding_gene 1471291 1472204 . - . ID=Thaps18434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C473];external_name=Thaps18434;logic_name=jgi_thaps3 chr6 ensembl transcript 1471291 1472204 . - . ID=Thaps18434;Parent=Thaps18434;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1471291 1471454 . - 0 ID=Thaps18434;Parent=Thaps18434;rank=4 chr6 . exon 1471291 1471454 . - . ID=Thaps18434.4;Parent=Thaps18434;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1471544 1471640 . - 0 ID=Thaps18434;Parent=Thaps18434;rank=3 chr6 . exon 1471544 1471640 . - . ID=Thaps18434.3;Parent=Thaps18434;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1471730 1471885 . - 0 ID=Thaps18434;Parent=Thaps18434;rank=2 chr6 . exon 1471730 1471885 . - . ID=Thaps18434.2;Parent=Thaps18434;constitutive=1;rank=2 chr6 . CDS 1471980 1472204 . - 0 ID=Thaps18434;Parent=Thaps18434;rank=1 chr6 . exon 1471980 1472204 . - . ID=Thaps18434.1;Parent=Thaps18434;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1465538 1466776 . - . ID=Thaps35049;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C470];external_name=Thaps35049;logic_name=jgi_thaps3 chr6 ensembl transcript 1465538 1466776 . - . ID=Thaps35049;Parent=Thaps35049;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1465538 1465843 . - 0 ID=Thaps35049;Parent=Thaps35049;rank=2 chr6 . exon 1465538 1465843 . - . ID=Thaps35049.2;Parent=Thaps35049;constitutive=1;rank=2 chr6 . CDS 1465937 1466776 . - 0 ID=Thaps35049;Parent=Thaps35049;rank=1 chr6 . exon 1465937 1466776 . - . ID=Thaps35049.1;Parent=Thaps35049;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1467778 1469553 . + . ID=Thaps6395;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C471];external_name=Thaps6395;logic_name=jgi_thaps3 chr6 ensembl transcript 1467778 1469553 . + . ID=Thaps6395;Parent=Thaps6395;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1467778 1469553 . + 0 ID=Thaps6395;Parent=Thaps6395;rank=1 chr6 . exon 1467778 1469553 . + . ID=Thaps6395.1;Parent=Thaps6395;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1469730 1470074 . + . ID=Thaps6396;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C472];external_name=Thaps6396;logic_name=jgi_thaps3 chr6 ensembl transcript 1469730 1470074 . + . ID=Thaps6396;Parent=Thaps6396;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1469730 1470074 . + 0 ID=Thaps6396;Parent=Thaps6396;rank=1 chr6 . exon 1469730 1470074 . + . ID=Thaps6396.1;Parent=Thaps6396;constitutive=1;rank=1 chr6 . repeat_region 1475582 1475611 . ? . description=trf chr6 . repeat_region 1480694 1480732 . ? . description=trf chr6 ensembl protein_coding_gene 1480683 1483562 . + . ID=Thaps23223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C476];external_name=Thaps23223;logic_name=jgi_thaps3 chr6 ensembl transcript 1480683 1483562 . + . ID=Thaps23223;Parent=Thaps23223;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1480683 1482881 . + 0 ID=Thaps23223;Parent=Thaps23223;rank=1 chr6 . exon 1480683 1482881 . + . ID=Thaps23223.1;Parent=Thaps23223;constitutive=1;rank=1 chr6 . CDS 1482972 1483562 . + 0 ID=Thaps23223;Parent=Thaps23223;rank=2 chr6 . exon 1482972 1483562 . + . ID=Thaps23223.2;Parent=Thaps23223;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1475820 1476737 . + . ID=Thaps269151;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C474];external_name=Thaps269151;logic_name=jgi_thaps3 chr6 ensembl transcript 1475820 1476737 . + . ID=Thaps269151;Parent=Thaps269151;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1475820 1476083 . + 0 ID=Thaps269151;Parent=Thaps269151;rank=1 chr6 . exon 1475820 1476083 . + . ID=Thaps269151.1;Parent=Thaps269151;constitutive=1;rank=1 chr6 . CDS 1476177 1476425 . + 0 ID=Thaps269151;Parent=Thaps269151;rank=2 chr6 . exon 1476177 1476425 . + . ID=Thaps269151.2;Parent=Thaps269151;constitutive=1;rank=2 chr6 . CDS 1476528 1476737 . + 0 ID=Thaps269151;Parent=Thaps269151;rank=3 chr6 . exon 1476528 1476737 . + . ID=Thaps269151.3;Parent=Thaps269151;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1477416 1480037 . - . ID=Thaps6398;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C475];external_name=Thaps6398;logic_name=jgi_thaps3 chr6 ensembl transcript 1477416 1480037 . - . ID=Thaps6398;Parent=Thaps6398;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1477416 1478063 . - 0 ID=Thaps6398;Parent=Thaps6398;rank=3 chr6 . exon 1477416 1478063 . - . ID=Thaps6398.3;Parent=Thaps6398;constitutive=1;rank=3 chr6 . CDS 1478144 1479783 . - 0 ID=Thaps6398;Parent=Thaps6398;rank=2 chr6 . exon 1478144 1479783 . - . ID=Thaps6398.2;Parent=Thaps6398;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1479812 1480037 . - 0 ID=Thaps6398;Parent=Thaps6398;rank=1 chr6 . exon 1479812 1480037 . - . ID=Thaps6398.1;Parent=Thaps6398;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1483859 1487705 . - . ID=Thaps6400;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C477];external_name=Thaps6400;logic_name=jgi_thaps3 chr6 ensembl transcript 1483859 1487705 . - . ID=Thaps6400;Parent=Thaps6400;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1483859 1483885 . - 0 ID=Thaps6400;Parent=Thaps6400;rank=5 chr6 . exon 1483859 1483885 . - . ID=Thaps6400.5;Parent=Thaps6400;constitutive=1;rank=5 chr6 . CDS 1483980 1484345 . - 0 ID=Thaps6400;Parent=Thaps6400;rank=4 chr6 . exon 1483980 1484345 . - . ID=Thaps6400.4;Parent=Thaps6400;constitutive=1;rank=4 chr6 . CDS 1484488 1484562 . - 0 ID=Thaps6400;Parent=Thaps6400;rank=3 chr6 . CDS 1484625 1486562 . - 0 ID=Thaps6400;Parent=Thaps6400;rank=2 chr6 . CDS 1486620 1487705 . - 0 ID=Thaps6400;Parent=Thaps6400;rank=1 chr6 . repeat_region 1487863 1487899 . ? . description=dust chr6 . biological_region 1488121 1488121 0.999 - . logic_name=eponine chr6 ensembl protein_coding_gene 1492025 1493852 . - . ID=Thaps23224;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C480];external_name=Thaps23224;logic_name=jgi_thaps3 chr6 ensembl transcript 1492025 1493852 . - . ID=Thaps23224;Parent=Thaps23224;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1492025 1492517 . - 0 ID=Thaps23224;Parent=Thaps23224;rank=2 chr6 . exon 1492025 1492517 . - . ID=Thaps23224.2;Parent=Thaps23224;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1492621 1493852 . - 0 ID=Thaps23224;Parent=Thaps23224;rank=1 chr6 . exon 1492621 1493852 . - . ID=Thaps23224.1;Parent=Thaps23224;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . exon 1484488 1484562 . - . ID=Thaps6400.3;Parent=Thaps6400;constitutive=1;rank=3 chr6 . exon 1484625 1486562 . - . ID=Thaps6400.2;Parent=Thaps6400;constitutive=1;rank=2 chr6 . exon 1486620 1487705 . - . ID=Thaps6400.1;Parent=Thaps6400;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1487904 1488815 . + . ID=Thaps6401;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C478];external_name=Thaps6401;logic_name=jgi_thaps3 chr6 ensembl transcript 1487904 1488815 . + . ID=Thaps6401;Parent=Thaps6401;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1487904 1488815 . + 0 ID=Thaps6401;Parent=Thaps6401;rank=1 chr6 . exon 1487904 1488815 . + . ID=Thaps6401.1;Parent=Thaps6401;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1489201 1490256 . + . ID=Thaps6402;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C479];external_name=Thaps6402;logic_name=jgi_thaps3 chr6 ensembl transcript 1489201 1490256 . + . ID=Thaps6402;Parent=Thaps6402;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1489201 1490256 . + 0 ID=Thaps6402;Parent=Thaps6402;rank=1 chr6 . exon 1489201 1490256 . + . ID=Thaps6402.1;Parent=Thaps6402;constitutive=1;rank=1 chr6 . repeat_region 1499698 1499848 . ? . description=trf chr6 . repeat_region 1499911 1499934 . ? . description=trf chr6 . repeat_region 1500156 1500426 . - . description=Copia9I_TP chr6 . repeat_region 1500476 1500728 . - . description=Copia9I_TP chr6 . repeat_region 1502287 1502470 . + . description=Gypsy1ALTR_TP chr6 ensembl tRNA_gene 1503523 1503595 . + . ID=EPrTPOG00000000007;biotype=tRNA;description=tRNA-Glu for anticodon UUC [Source:TRNASCAN_SE%3BAcc:tRNA-Glu];external_name=tRNA-Glu;logic_name=ncrna_eg chr6 ensembl transcript 1503523 1503595 . + . ID=EPrTPOT00000000011;Parent=EPrTPOG00000000007;biotype=tRNA;logic_name=ncrna_eg chr6 ensembl tRNA_gene 1499649 1499721 . + . ID=EPrTPOG00000000019;biotype=tRNA;description=tRNA-Glu for anticodon UUC [Source:TRNASCAN_SE%3BAcc:tRNA-Glu];external_name=tRNA-Glu;logic_name=ncrna_eg chr6 ensembl transcript 1499649 1499721 . + . ID=EPrTPOT00000000013;Parent=EPrTPOG00000000019;biotype=tRNA;logic_name=ncrna_eg chr6 ensembl tRNA_gene 1499552 1499642 . + . ID=EPrTPOG00000000027;biotype=tRNA;description=tRNA-Gly for anticodon GCC [Source:TRNASCAN_SE%3BAcc:tRNA-Gly];external_name=tRNA-Gly;logic_name=ncrna_eg chr6 ensembl transcript 1499552 1499642 . + . ID=EPrTPOT00000000004;Parent=EPrTPOG00000000027;biotype=tRNA;logic_name=ncrna_eg chr6 . exon 1499552 1499642 . + . ID=EPrTPOE00000000027;Parent=EPrTPOT00000000004;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . exon 1503523 1503595 . + . ID=EPrTPOE00000000007;Parent=EPrTPOT00000000011;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . exon 1499649 1499721 . + . ID=EPrTPOE00000000019;Parent=EPrTPOT00000000013;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1497257 1498873 . + . ID=Thaps23225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C482];external_name=Thaps23225;logic_name=jgi_thaps3 chr6 ensembl transcript 1497257 1498873 . + . ID=Thaps23225;Parent=Thaps23225;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1497257 1498873 . + 0 ID=Thaps23225;Parent=Thaps23225;rank=1 chr6 . exon 1497257 1498873 . + . ID=Thaps23225.1;Parent=Thaps23225;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1494325 1496829 . - . ID=Thaps6404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C481];external_name=Thaps6404;logic_name=jgi_thaps3 chr6 ensembl transcript 1494325 1496829 . - . ID=Thaps6404;Parent=Thaps6404;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1494325 1496829 . - 0 ID=Thaps6404;Parent=Thaps6404;rank=1 chr6 . exon 1494325 1496829 . - . ID=Thaps6404.1;Parent=Thaps6404;constitutive=1;rank=1 chr6 . repeat_region 1506964 1506971 . ? . description=dust chr6 . repeat_region 1507606 1507657 . ? . description=dust chr6 . repeat_region 1512801 1512834 . ? . description=dust chr6 ensembl protein_coding_gene 1507220 1508365 . + . ID=Thaps23226;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C484];external_name=Thaps23226;logic_name=jgi_thaps3 chr6 ensembl transcript 1507220 1508365 . + . ID=Thaps23226;Parent=Thaps23226;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1507220 1508365 . + 0 ID=Thaps23226;Parent=Thaps23226;rank=1 chr6 . exon 1507220 1508365 . + . ID=Thaps23226.1;Parent=Thaps23226;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1510730 1512649 . - . ID=Thaps23228;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C486];external_name=Thaps23228;logic_name=jgi_thaps3 chr6 ensembl transcript 1510730 1512649 . - . ID=Thaps23228;Parent=Thaps23228;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1510730 1512233 . - 0 ID=Thaps23228;Parent=Thaps23228;rank=2 chr6 . exon 1510730 1512233 . - . ID=Thaps23228.2;Parent=Thaps23228;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1512543 1512649 . - 0 ID=Thaps23228;Parent=Thaps23228;rank=1 chr6 . exon 1512543 1512649 . - . ID=Thaps23228.1;Parent=Thaps23228;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1513248 1514360 . + . ID=Thaps34735;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C487];external_name=Thaps34735;logic_name=jgi_thaps3 chr6 ensembl transcript 1513248 1514360 . + . ID=Thaps34735;Parent=Thaps34735;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1513248 1513513 . + 0 ID=Thaps34735;Parent=Thaps34735;rank=1 chr6 . exon 1513248 1513513 . + . ID=Thaps34735.1;Parent=Thaps34735;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1513595 1513637 . + 0 ID=Thaps34735;Parent=Thaps34735;rank=2 chr6 . exon 1513595 1513637 . + . ID=Thaps34735.2;Parent=Thaps34735;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1513722 1513984 . + 0 ID=Thaps34735;Parent=Thaps34735;rank=3 chr6 . exon 1513722 1513984 . + . ID=Thaps34735.3;Parent=Thaps34735;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1514081 1514360 . + 0 ID=Thaps34735;Parent=Thaps34735;rank=4 chr6 ensembl protein_coding_gene 1505646 1506659 . - . ID=Thaps34771;biotype=protein_coding;description=Methionyl-trna formyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C483];external_name=MTF1;logic_name=jgi_thaps3 chr6 ensembl transcript 1505646 1506659 . - . ID=Thaps34771;Parent=Thaps34771;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1505646 1506659 . - 0 ID=Thaps34771;Parent=Thaps34771;rank=1 chr6 . exon 1505646 1506659 . - . ID=Thaps34771.1;Parent=Thaps34771;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1508523 1510497 . - . ID=Thaps6408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C485];external_name=Thaps6408;logic_name=jgi_thaps3 chr6 ensembl transcript 1508523 1510497 . - . ID=Thaps6408;Parent=Thaps6408;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1508523 1509758 . - 0 ID=Thaps6408;Parent=Thaps6408;rank=4 chr6 . exon 1508523 1509758 . - . ID=Thaps6408.4;Parent=Thaps6408;constitutive=1;rank=4 chr6 . CDS 1509835 1509938 . - 0 ID=Thaps6408;Parent=Thaps6408;rank=3 chr6 . exon 1509835 1509938 . - . ID=Thaps6408.3;Parent=Thaps6408;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1510041 1510261 . - 0 ID=Thaps6408;Parent=Thaps6408;rank=2 chr6 . exon 1510041 1510261 . - . ID=Thaps6408.2;Parent=Thaps6408;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1510430 1510497 . - 0 ID=Thaps6408;Parent=Thaps6408;rank=1 chr6 . exon 1510430 1510497 . - . ID=Thaps6408.1;Parent=Thaps6408;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 1519029 1519069 . ? . description=trf chr6 ensembl protein_coding_gene 1518863 1520110 . + . ID=Thaps23230;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C491];external_name=Thaps23230;logic_name=jgi_thaps3 chr6 ensembl transcript 1518863 1520110 . + . ID=Thaps23230;Parent=Thaps23230;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1518863 1520110 . + 0 ID=Thaps23230;Parent=Thaps23230;rank=1 chr6 . exon 1518863 1520110 . + . ID=Thaps23230.1;Parent=Thaps23230;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1517721 1518272 . + . ID=Thaps34681;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C490];external_name=Thaps34681;logic_name=jgi_thaps3 chr6 ensembl transcript 1517721 1518272 . + . ID=Thaps34681;Parent=Thaps34681;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1517721 1517819 . + 0 ID=Thaps34681;Parent=Thaps34681;rank=1 chr6 . exon 1517721 1517819 . + . ID=Thaps34681.1;Parent=Thaps34681;constitutive=1;rank=1 chr6 . CDS 1517943 1518272 . + 0 ID=Thaps34681;Parent=Thaps34681;rank=2 chr6 . exon 1517943 1518272 . + . ID=Thaps34681.2;Parent=Thaps34681;constitutive=1;rank=2 chr6 . exon 1514081 1514360 . + . ID=Thaps34735.4;Parent=Thaps34735;constitutive=1;ensembl_end_phase=1;rank=4 chr6 ensembl protein_coding_gene 1514855 1516363 . - . ID=Thaps547;biotype=protein_coding;description=Dihydrolipamide s-acetyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C488];external_name=Thaps547;logic_name=jgi_thaps3 chr6 ensembl transcript 1514855 1516363 . - . ID=Thaps547;Parent=Thaps547;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1514855 1515172 . - 0 ID=Thaps547;Parent=Thaps547;rank=3 chr6 . exon 1514855 1515172 . - . ID=Thaps547.3;Parent=Thaps547;constitutive=1;rank=3 chr6 . CDS 1515260 1515627 . - 0 ID=Thaps547;Parent=Thaps547;rank=2 chr6 . exon 1515260 1515627 . - . ID=Thaps547.2;Parent=Thaps547;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1515769 1516363 . - 0 ID=Thaps547;Parent=Thaps547;rank=1 chr6 . exon 1515769 1516363 . - . ID=Thaps547.1;Parent=Thaps547;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1516648 1517064 . - . ID=Thaps6413;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C489];external_name=Thaps6413;logic_name=jgi_thaps3 chr6 ensembl transcript 1516648 1517064 . - . ID=Thaps6413;Parent=Thaps6413;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1516648 1516682 . - 0 ID=Thaps6413;Parent=Thaps6413;rank=2 chr6 . exon 1516648 1516682 . - . ID=Thaps6413.2;Parent=Thaps6413;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1516719 1517064 . - 0 ID=Thaps6413;Parent=Thaps6413;rank=1 chr6 . exon 1516719 1517064 . - . ID=Thaps6413.1;Parent=Thaps6413;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1522383 1523618 . + . ID=Thaps6416;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C492];external_name=Thaps6416;logic_name=jgi_thaps3 chr6 ensembl transcript 1522383 1523618 . + . ID=Thaps6416;Parent=Thaps6416;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1522383 1523618 . + 0 ID=Thaps6416;Parent=Thaps6416;rank=1 chr6 . exon 1522383 1523618 . + . ID=Thaps6416.1;Parent=Thaps6416;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1528181 1528534 . + . ID=Thaps19639;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C495];external_name=Thaps19639;logic_name=jgi_thaps3 chr6 ensembl transcript 1528181 1528534 . + . ID=Thaps19639;Parent=Thaps19639;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1528181 1528534 . + 0 ID=Thaps19639;Parent=Thaps19639;rank=1 chr6 . exon 1528181 1528534 . + . ID=Thaps19639.1;Parent=Thaps19639;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1524599 1525450 . - . ID=Thaps262975;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C493];external_name=Thaps262975;logic_name=jgi_thaps3 chr6 ensembl transcript 1524599 1525450 . - . ID=Thaps262975;Parent=Thaps262975;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1524599 1525450 . - 0 ID=Thaps262975;Parent=Thaps262975;rank=1 chr6 . exon 1524599 1525450 . - . ID=Thaps262975.1;Parent=Thaps262975;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1528815 1529966 . - . ID=Thaps262976;biotype=protein_coding;description=3'%2C5'-cyclic amp phosphodiesterase [Source:UniProtKB/TrEMBL%3BAcc:B8C496];external_name=Thaps262976;logic_name=jgi_thaps3 chr6 ensembl transcript 1528815 1529966 . - . ID=Thaps262976;Parent=Thaps262976;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1528815 1529482 . - 0 ID=Thaps262976;Parent=Thaps262976;rank=3 chr6 . exon 1528815 1529482 . - . ID=Thaps262976.3;Parent=Thaps262976;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1529582 1529828 . - 0 ID=Thaps262976;Parent=Thaps262976;rank=2 chr6 . exon 1529582 1529828 . - . ID=Thaps262976.2;Parent=Thaps262976;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1529883 1529966 . - 0 ID=Thaps262976;Parent=Thaps262976;rank=1 chr6 . exon 1529883 1529966 . - . ID=Thaps262976.1;Parent=Thaps262976;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1533676 1533948 . - . ID=Thaps262977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C497];external_name=Thaps262977;logic_name=jgi_thaps3 chr6 ensembl transcript 1533676 1533948 . - . ID=Thaps262977;Parent=Thaps262977;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1533676 1533948 . - 0 ID=Thaps262977;Parent=Thaps262977;rank=1 chr6 . exon 1533676 1533948 . - . ID=Thaps262977.1;Parent=Thaps262977;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1526280 1527365 . - . ID=Thaps6418;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C494];external_name=Thaps6418;logic_name=jgi_thaps3 chr6 ensembl transcript 1526280 1527365 . - . ID=Thaps6418;Parent=Thaps6418;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1526280 1526760 . - 0 ID=Thaps6418;Parent=Thaps6418;rank=3 chr6 . exon 1526280 1526760 . - . ID=Thaps6418.3;Parent=Thaps6418;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1526894 1527154 . - 0 ID=Thaps6418;Parent=Thaps6418;rank=2 chr6 . exon 1526894 1527154 . - . ID=Thaps6418.2;Parent=Thaps6418;constitutive=1;rank=2 chr6 . CDS 1527232 1527365 . - 0 ID=Thaps6418;Parent=Thaps6418;rank=1 chr6 . exon 1527232 1527365 . - . ID=Thaps6418.1;Parent=Thaps6418;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 1538778 1538785 . ? . description=dust chr6 ensembl protein_coding_gene 1536598 1538007 . - . ID=Thaps23232;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C499];external_name=Thaps23232;logic_name=jgi_thaps3 chr6 ensembl transcript 1536598 1538007 . - . ID=Thaps23232;Parent=Thaps23232;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1536598 1538007 . - 0 ID=Thaps23232;Parent=Thaps23232;rank=1 chr6 . exon 1536598 1538007 . - . ID=Thaps23232.1;Parent=Thaps23232;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1540810 1542510 . + . ID=Thaps35087;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4A1];external_name=Thaps35087;logic_name=jgi_thaps3 chr6 ensembl transcript 1540810 1542510 . + . ID=Thaps35087;Parent=Thaps35087;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1540810 1541020 . + 0 ID=Thaps35087;Parent=Thaps35087;rank=1 chr6 . exon 1540810 1541020 . + . ID=Thaps35087.1;Parent=Thaps35087;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1541201 1541724 . + 0 ID=Thaps35087;Parent=Thaps35087;rank=2 chr6 . exon 1541201 1541724 . + . ID=Thaps35087.2;Parent=Thaps35087;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1541791 1541989 . + 0 ID=Thaps35087;Parent=Thaps35087;rank=3 chr6 . exon 1541791 1541989 . + . ID=Thaps35087.3;Parent=Thaps35087;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1542074 1542510 . + 0 ID=Thaps35087;Parent=Thaps35087;rank=4 chr6 . exon 1542074 1542510 . + . ID=Thaps35087.4;Parent=Thaps35087;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 1535029 1536470 . + . ID=Thaps6422;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C498];external_name=Thaps6422;logic_name=jgi_thaps3 chr6 ensembl transcript 1535029 1536470 . + . ID=Thaps6422;Parent=Thaps6422;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1535029 1536305 . + 0 ID=Thaps6422;Parent=Thaps6422;rank=1 chr6 . exon 1535029 1536305 . + . ID=Thaps6422.1;Parent=Thaps6422;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1536407 1536470 . + 0 ID=Thaps6422;Parent=Thaps6422;rank=2 chr6 . exon 1536407 1536470 . + . ID=Thaps6422.2;Parent=Thaps6422;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1538648 1540516 . - . ID=Thaps6424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4A0];external_name=Thaps6424;logic_name=jgi_thaps3 chr6 ensembl transcript 1538648 1540516 . - . ID=Thaps6424;Parent=Thaps6424;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1538648 1540516 . - 0 ID=Thaps6424;Parent=Thaps6424;rank=1 chr6 . exon 1538648 1540516 . - . ID=Thaps6424.1;Parent=Thaps6424;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1543654 1545015 . - . ID=Thaps6426;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4A2];external_name=Thaps6426;logic_name=jgi_thaps3 chr6 ensembl transcript 1543654 1545015 . - . ID=Thaps6426;Parent=Thaps6426;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1543654 1544076 . - 0 ID=Thaps6426;Parent=Thaps6426;rank=3 chr6 . exon 1543654 1544076 . - . ID=Thaps6426.3;Parent=Thaps6426;constitutive=1;rank=3 chr6 . CDS 1544114 1544545 . - 0 ID=Thaps6426;Parent=Thaps6426;rank=2 chr6 . CDS 1544776 1545015 . - 0 ID=Thaps6426;Parent=Thaps6426;rank=1 chr6 ensembl protein_coding_gene 1545798 1546355 . + . ID=Thaps18613;biotype=protein_coding;description=ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C4A3];external_name=Thaps18613;logic_name=jgi_thaps3 chr6 ensembl transcript 1545798 1546355 . + . ID=Thaps18613;Parent=Thaps18613;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1545798 1546355 . + 0 ID=Thaps18613;Parent=Thaps18613;rank=1 chr6 . exon 1545798 1546355 . + . ID=Thaps18613.1;Parent=Thaps18613;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1548813 1550937 . + . ID=Thaps262980;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4A4];external_name=Thaps262980;logic_name=jgi_thaps3 chr6 ensembl transcript 1548813 1550937 . + . ID=Thaps262980;Parent=Thaps262980;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1548813 1548898 . + 0 ID=Thaps262980;Parent=Thaps262980;rank=1 chr6 . exon 1548813 1548898 . + . ID=Thaps262980.1;Parent=Thaps262980;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1548972 1549476 . + 0 ID=Thaps262980;Parent=Thaps262980;rank=2 chr6 . exon 1548972 1549476 . + . ID=Thaps262980.2;Parent=Thaps262980;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1549594 1550937 . + 0 ID=Thaps262980;Parent=Thaps262980;rank=3 chr6 . exon 1549594 1550937 . + . ID=Thaps262980.3;Parent=Thaps262980;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1552102 1554098 . - . ID=Thaps269158;biotype=protein_coding;description=Sugar transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C4A5];external_name=Thaps269158;logic_name=jgi_thaps3 chr6 ensembl transcript 1552102 1554098 . - . ID=Thaps269158;Parent=Thaps269158;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1552102 1552550 . - 0 ID=Thaps269158;Parent=Thaps269158;rank=4 chr6 . exon 1552102 1552550 . - . ID=Thaps269158.4;Parent=Thaps269158;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1552641 1552722 . - 0 ID=Thaps269158;Parent=Thaps269158;rank=3 chr6 . exon 1552641 1552722 . - . ID=Thaps269158.3;Parent=Thaps269158;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1552819 1553091 . - 0 ID=Thaps269158;Parent=Thaps269158;rank=2 chr6 . exon 1552819 1553091 . - . ID=Thaps269158.2;Parent=Thaps269158;constitutive=1;rank=2 chr6 . CDS 1553190 1554098 . - 0 ID=Thaps269158;Parent=Thaps269158;rank=1 chr6 . exon 1553190 1554098 . - . ID=Thaps269158.1;Parent=Thaps269158;constitutive=1;rank=1 chr6 . exon 1544114 1544545 . - . ID=Thaps6426.2;Parent=Thaps6426;constitutive=1;rank=2 chr6 . exon 1544776 1545015 . - . ID=Thaps6426.1;Parent=Thaps6426;constitutive=1;rank=1 chr6 . repeat_region 1560811 1560818 . ? . description=dust chr6 ensembl protein_coding_gene 1560311 1561267 . - . ID=Thaps23240;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4A9];external_name=Thaps23240;logic_name=jgi_thaps3 chr6 ensembl transcript 1560311 1561267 . - . ID=Thaps23240;Parent=Thaps23240;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1560311 1561267 . - 0 ID=Thaps23240;Parent=Thaps23240;rank=1 chr6 . exon 1560311 1561267 . - . ID=Thaps23240.1;Parent=Thaps23240;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1554974 1556257 . - . ID=Thaps269159;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4A6];external_name=Thaps269159;logic_name=jgi_thaps3 chr6 ensembl transcript 1554974 1556257 . - . ID=Thaps269159;Parent=Thaps269159;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1554974 1555175 . - 0 ID=Thaps269159;Parent=Thaps269159;rank=3 chr6 . exon 1554974 1555175 . - . ID=Thaps269159.3;Parent=Thaps269159;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1555306 1555966 . - 0 ID=Thaps269159;Parent=Thaps269159;rank=2 chr6 . exon 1555306 1555966 . - . ID=Thaps269159.2;Parent=Thaps269159;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1556044 1556257 . - 0 ID=Thaps269159;Parent=Thaps269159;rank=1 chr6 . exon 1556044 1556257 . - . ID=Thaps269159.1;Parent=Thaps269159;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1557242 1558715 . - . ID=Thaps269160;biotype=protein_coding;description=Putative uncharacterized protein gltD [Source:UniProtKB/TrEMBL%3BAcc:B8C4A8];external_name=GLTD;logic_name=jgi_thaps3 chr6 ensembl transcript 1557242 1558715 . - . ID=Thaps269160;Parent=Thaps269160;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1557242 1557991 . - 0 ID=Thaps269160;Parent=Thaps269160;rank=2 chr6 . exon 1557242 1557991 . - . ID=Thaps269160.2;Parent=Thaps269160;constitutive=1;rank=2 chr6 . CDS 1558074 1558715 . - 0 ID=Thaps269160;Parent=Thaps269160;rank=1 chr6 . exon 1558074 1558715 . - . ID=Thaps269160.1;Parent=Thaps269160;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1556437 1557063 . + . ID=Thaps6431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4A7];external_name=Thaps6431;logic_name=jgi_thaps3 chr6 ensembl transcript 1556437 1557063 . + . ID=Thaps6431;Parent=Thaps6431;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1556437 1557063 . + 0 ID=Thaps6431;Parent=Thaps6431;rank=1 chr6 . exon 1556437 1557063 . + . ID=Thaps6431.1;Parent=Thaps6431;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1562045 1563289 . + . ID=Thaps6434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B0];external_name=Thaps6434;logic_name=jgi_thaps3 chr6 ensembl transcript 1562045 1563289 . + . ID=Thaps6434;Parent=Thaps6434;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1562045 1562336 . + 0 ID=Thaps6434;Parent=Thaps6434;rank=1 chr6 . exon 1562045 1562336 . + . ID=Thaps6434.1;Parent=Thaps6434;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1562601 1562727 . + 0 ID=Thaps6434;Parent=Thaps6434;rank=2 chr6 . exon 1562601 1562727 . + . ID=Thaps6434.2;Parent=Thaps6434;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1562914 1563289 . + 0 ID=Thaps6434;Parent=Thaps6434;rank=3 chr6 . exon 1562914 1563289 . + . ID=Thaps6434.3;Parent=Thaps6434;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . repeat_region 1572377 1572396 . ? . description=trf chr6 ensembl protein_coding_gene 1564853 1566667 . + . ID=Thaps23242;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B2];external_name=Thaps23242;logic_name=jgi_thaps3 chr6 ensembl transcript 1564853 1566667 . + . ID=Thaps23242;Parent=Thaps23242;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1564853 1565258 . + 0 ID=Thaps23242;Parent=Thaps23242;rank=1 chr6 . exon 1564853 1565258 . + . ID=Thaps23242.1;Parent=Thaps23242;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1565574 1566667 . + 0 ID=Thaps23242;Parent=Thaps23242;rank=2 chr6 . exon 1565574 1566667 . + . ID=Thaps23242.2;Parent=Thaps23242;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1566726 1568324 . - . ID=Thaps23243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B3];external_name=Thaps23243;logic_name=jgi_thaps3 chr6 ensembl transcript 1566726 1568324 . - . ID=Thaps23243;Parent=Thaps23243;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1566726 1567027 . - 0 ID=Thaps23243;Parent=Thaps23243;rank=2 chr6 . exon 1566726 1567027 . - . ID=Thaps23243.2;Parent=Thaps23243;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1567115 1568324 . - 0 ID=Thaps23243;Parent=Thaps23243;rank=1 chr6 . exon 1567115 1568324 . - . ID=Thaps23243.1;Parent=Thaps23243;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1570904 1572406 . - . ID=Thaps23245;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B5];external_name=Thaps23245;logic_name=jgi_thaps3 chr6 ensembl transcript 1570904 1572406 . - . ID=Thaps23245;Parent=Thaps23245;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1570904 1572406 . - 0 ID=Thaps23245;Parent=Thaps23245;rank=1 chr6 . exon 1570904 1572406 . - . ID=Thaps23245.1;Parent=Thaps23245;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1572754 1573695 . + . ID=Thaps23246;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B6];external_name=Thaps23246;logic_name=jgi_thaps3 chr6 ensembl transcript 1572754 1573695 . + . ID=Thaps23246;Parent=Thaps23246;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1572754 1573012 . + 0 ID=Thaps23246;Parent=Thaps23246;rank=1 chr6 . exon 1572754 1573012 . + . ID=Thaps23246.1;Parent=Thaps23246;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1573124 1573695 . + 0 ID=Thaps23246;Parent=Thaps23246;rank=2 chr6 . exon 1573124 1573695 . + . ID=Thaps23246.2;Parent=Thaps23246;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1568930 1570804 . + . ID=Thaps269163;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B4];external_name=Thaps269163;logic_name=jgi_thaps3 chr6 ensembl transcript 1568930 1570804 . + . ID=Thaps269163;Parent=Thaps269163;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1568930 1569791 . + 0 ID=Thaps269163;Parent=Thaps269163;rank=1 chr6 . exon 1568930 1569791 . + . ID=Thaps269163.1;Parent=Thaps269163;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1569903 1570804 . + 0 ID=Thaps269163;Parent=Thaps269163;rank=2 chr6 . exon 1569903 1570804 . + . ID=Thaps269163.2;Parent=Thaps269163;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1563777 1564559 . - . ID=Thaps28755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B1];external_name=Thaps28755;logic_name=jgi_thaps3 chr6 ensembl transcript 1563777 1564559 . - . ID=Thaps28755;Parent=Thaps28755;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1563777 1564559 . - 0 ID=Thaps28755;Parent=Thaps28755;rank=1 chr6 . exon 1563777 1564559 . - . ID=Thaps28755.1;Parent=Thaps28755;constitutive=1;rank=1 chr6 . repeat_region 1578562 1578585 . ? . description=dust chr6 . repeat_region 1580191 1581191 . + . description=Copia9I_TP chr6 . repeat_region 1581193 1581216 . ? . description=dust chr6 ensembl protein_coding_gene 1581599 1586786 . + . ID=Thaps23247;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4C0];external_name=Thaps23247;logic_name=jgi_thaps3 chr6 ensembl transcript 1581599 1586786 . + . ID=Thaps23247;Parent=Thaps23247;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1581599 1582136 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=1 chr6 . exon 1581599 1582136 . + . ID=Thaps23247.1;Parent=Thaps23247;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1582228 1582530 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=2 chr6 . exon 1582228 1582530 . + . ID=Thaps23247.2;Parent=Thaps23247;constitutive=1;rank=2 chr6 . CDS 1582636 1584302 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=3 chr6 . exon 1582636 1584302 . + . ID=Thaps23247.3;Parent=Thaps23247;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1584389 1584532 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=4 chr6 . CDS 1584613 1584672 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=5 chr6 . CDS 1584743 1585368 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=6 chr6 . CDS 1585448 1585523 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=7 chr6 . CDS 1585637 1585696 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=8 chr6 . CDS 1585805 1585888 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=9 chr6 . CDS 1586013 1586072 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=10 chr6 . CDS 1586148 1586786 . + 0 ID=Thaps23247;Parent=Thaps23247;rank=11 chr6 ensembl protein_coding_gene 1573802 1574615 . - . ID=Thaps41166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B7];external_name=Thaps41166;logic_name=jgi_thaps3 chr6 ensembl transcript 1573802 1574615 . - . ID=Thaps41166;Parent=Thaps41166;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1573802 1574412 . - 0 ID=Thaps41166;Parent=Thaps41166;rank=2 chr6 . exon 1573802 1574412 . - . ID=Thaps41166.2;Parent=Thaps41166;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1574519 1574615 . - 0 ID=Thaps41166;Parent=Thaps41166;rank=1 chr6 . exon 1574519 1574615 . - . ID=Thaps41166.1;Parent=Thaps41166;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1574943 1576230 . + . ID=Thaps6441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B8];external_name=Thaps6441;logic_name=jgi_thaps3 chr6 ensembl transcript 1574943 1576230 . + . ID=Thaps6441;Parent=Thaps6441;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1574943 1576042 . + 0 ID=Thaps6441;Parent=Thaps6441;rank=1 chr6 . exon 1574943 1576042 . + . ID=Thaps6441.1;Parent=Thaps6441;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1576206 1576230 . + 0 ID=Thaps6441;Parent=Thaps6441;rank=2 chr6 . exon 1576206 1576230 . + . ID=Thaps6441.2;Parent=Thaps6441;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1577510 1579854 . + . ID=Thaps6442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4B9];external_name=Thaps6442;logic_name=jgi_thaps3 chr6 ensembl transcript 1577510 1579854 . + . ID=Thaps6442;Parent=Thaps6442;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1577510 1578158 . + 0 ID=Thaps6442;Parent=Thaps6442;rank=1 chr6 . exon 1577510 1578158 . + . ID=Thaps6442.1;Parent=Thaps6442;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1578249 1578548 . + 0 ID=Thaps6442;Parent=Thaps6442;rank=2 chr6 . exon 1578249 1578548 . + . ID=Thaps6442.2;Parent=Thaps6442;constitutive=1;rank=2 chr6 . CDS 1578633 1579300 . + 0 ID=Thaps6442;Parent=Thaps6442;rank=3 chr6 . exon 1578633 1579300 . + . ID=Thaps6442.3;Parent=Thaps6442;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1579370 1579432 . + 0 ID=Thaps6442;Parent=Thaps6442;rank=4 chr6 . exon 1579370 1579432 . + . ID=Thaps6442.4;Parent=Thaps6442;constitutive=1;rank=4 chr6 . CDS 1579657 1579708 . + 0 ID=Thaps6442;Parent=Thaps6442;rank=5 chr6 . exon 1579657 1579708 . + . ID=Thaps6442.5;Parent=Thaps6442;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 1579751 1579854 . + 0 ID=Thaps6442;Parent=Thaps6442;rank=6 chr6 . exon 1579751 1579854 . + . ID=Thaps6442.6;Parent=Thaps6442;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . exon 1584389 1584532 . + . ID=Thaps23247.4;Parent=Thaps23247;constitutive=1;rank=4 chr6 . exon 1584613 1584672 . + . ID=Thaps23247.5;Parent=Thaps23247;constitutive=1;rank=5 chr6 . exon 1584743 1585368 . + . ID=Thaps23247.6;Parent=Thaps23247;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . exon 1585448 1585523 . + . ID=Thaps23247.7;Parent=Thaps23247;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . exon 1585637 1585696 . + . ID=Thaps23247.8;Parent=Thaps23247;constitutive=1;rank=8 chr6 . exon 1585805 1585888 . + . ID=Thaps23247.9;Parent=Thaps23247;constitutive=1;rank=9 chr6 . exon 1586013 1586072 . + . ID=Thaps23247.10;Parent=Thaps23247;constitutive=1;rank=10 chr6 . exon 1586148 1586786 . + . ID=Thaps23247.11;Parent=Thaps23247;constitutive=1;rank=11 chr6 ensembl protein_coding_gene 1590394 1591839 . - . ID=Thaps41169;biotype=protein_coding;description=Probable mitochondrial processing peptidase [Source:UniProtKB/TrEMBL%3BAcc:B8C4C1];external_name=Thaps41169;logic_name=jgi_thaps3 chr6 ensembl transcript 1590394 1591839 . - . ID=Thaps41169;Parent=Thaps41169;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1590394 1591839 . - 0 ID=Thaps41169;Parent=Thaps41169;rank=1 chr6 . exon 1590394 1591839 . - . ID=Thaps41169.1;Parent=Thaps41169;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1593590 1594903 . - . ID=Thaps6445;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4C2];external_name=Thaps6445;logic_name=jgi_thaps3 chr6 ensembl transcript 1593590 1594903 . - . ID=Thaps6445;Parent=Thaps6445;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1593590 1594903 . - 0 ID=Thaps6445;Parent=Thaps6445;rank=1 chr6 . exon 1593590 1594903 . - . ID=Thaps6445.1;Parent=Thaps6445;constitutive=1;rank=1 chr6 . repeat_region 1602575 1602601 . ? . description=trf chr6 ensembl tRNA_gene 1600637 1600709 . + . ID=EPrTPOG00000000018;biotype=tRNA;description=tRNA-Glu for anticodon UUC [Source:TRNASCAN_SE%3BAcc:tRNA-Glu];external_name=tRNA-Glu;logic_name=ncrna_eg chr6 ensembl transcript 1600637 1600709 . + . ID=EPrTPOT00000000023;Parent=EPrTPOG00000000018;biotype=tRNA;logic_name=ncrna_eg chr6 . exon 1600637 1600709 . + . ID=EPrTPOE00000000018;Parent=EPrTPOT00000000023;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1601233 1602069 . - . ID=Thaps23249;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4C5];external_name=Thaps23249;logic_name=jgi_thaps3 chr6 ensembl transcript 1601233 1602069 . - . ID=Thaps23249;Parent=Thaps23249;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1601233 1602069 . - 0 ID=Thaps23249;Parent=Thaps23249;rank=1 chr6 . exon 1601233 1602069 . - . ID=Thaps23249.1;Parent=Thaps23249;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1602461 1603954 . + . ID=Thaps34996;biotype=protein_coding;description=Cdc37 protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4C6];external_name=CDC37;logic_name=jgi_thaps3 chr6 ensembl transcript 1602461 1603954 . + . ID=Thaps34996;Parent=Thaps34996;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1602461 1602628 . + 0 ID=Thaps34996;Parent=Thaps34996;rank=1 chr6 . exon 1602461 1602628 . + . ID=Thaps34996.1;Parent=Thaps34996;constitutive=1;rank=1 chr6 . CDS 1602749 1602956 . + 0 ID=Thaps34996;Parent=Thaps34996;rank=2 chr6 . exon 1602749 1602956 . + . ID=Thaps34996.2;Parent=Thaps34996;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1603218 1603954 . + 0 ID=Thaps34996;Parent=Thaps34996;rank=3 chr6 . exon 1603218 1603954 . + . ID=Thaps34996.3;Parent=Thaps34996;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 1595263 1596150 . + . ID=Thaps6446;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4C3];external_name=Thaps6446;logic_name=jgi_thaps3 chr6 ensembl transcript 1595263 1596150 . + . ID=Thaps6446;Parent=Thaps6446;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1595263 1596150 . + 0 ID=Thaps6446;Parent=Thaps6446;rank=1 chr6 . exon 1595263 1596150 . + . ID=Thaps6446.1;Parent=Thaps6446;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1596313 1600507 . - . ID=Thaps6447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4C4];external_name=Thaps6447;logic_name=jgi_thaps3 chr6 ensembl transcript 1596313 1600507 . - . ID=Thaps6447;Parent=Thaps6447;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1596313 1596341 . - 0 ID=Thaps6447;Parent=Thaps6447;rank=5 chr6 . exon 1596313 1596341 . - . ID=Thaps6447.5;Parent=Thaps6447;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1596463 1597575 . - 0 ID=Thaps6447;Parent=Thaps6447;rank=4 chr6 . exon 1596463 1597575 . - . ID=Thaps6447.4;Parent=Thaps6447;constitutive=1;rank=4 chr6 . CDS 1597658 1598332 . - 0 ID=Thaps6447;Parent=Thaps6447;rank=3 chr6 . exon 1597658 1598332 . - . ID=Thaps6447.3;Parent=Thaps6447;constitutive=1;rank=3 chr6 . CDS 1598614 1598674 . - 0 ID=Thaps6447;Parent=Thaps6447;rank=2 chr6 . exon 1598614 1598674 . - . ID=Thaps6447.2;Parent=Thaps6447;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1598747 1600507 . - 0 ID=Thaps6447;Parent=Thaps6447;rank=1 chr6 . exon 1598747 1600507 . - . ID=Thaps6447.1;Parent=Thaps6447;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1613251 1614690 . - . ID=Thaps28769;biotype=protein_coding;description=Protein transportor [Source:UniProtKB/TrEMBL%3BAcc:B8C4D0];external_name=SEC61-2;logic_name=jgi_thaps3 chr6 ensembl transcript 1613251 1614690 . - . ID=Thaps28769;Parent=Thaps28769;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1613251 1614690 . - 0 ID=Thaps28769;Parent=Thaps28769;rank=1 chr6 . exon 1613251 1614690 . - . ID=Thaps28769.1;Parent=Thaps28769;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1606122 1608977 . - . ID=Thaps34782;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C4C7];external_name=Thaps34782;logic_name=jgi_thaps3 chr6 ensembl transcript 1606122 1608977 . - . ID=Thaps34782;Parent=Thaps34782;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1606122 1606599 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=11 chr6 . exon 1606122 1606599 . - . ID=Thaps34782.11;Parent=Thaps34782;constitutive=1;ensembl_end_phase=1;rank=11 chr6 . CDS 1606639 1607018 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=10 chr6 . exon 1606639 1607018 . - . ID=Thaps34782.10;Parent=Thaps34782;constitutive=1;ensembl_end_phase=2;rank=10 chr6 . CDS 1607092 1607262 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=9 chr6 . exon 1607092 1607262 . - . ID=Thaps34782.9;Parent=Thaps34782;constitutive=1;rank=9 chr6 . CDS 1607347 1607468 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=8 chr6 . exon 1607347 1607468 . - . ID=Thaps34782.8;Parent=Thaps34782;constitutive=1;ensembl_end_phase=2;rank=8 chr6 . CDS 1607552 1607751 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=7 chr6 . exon 1607552 1607751 . - . ID=Thaps34782.7;Parent=Thaps34782;constitutive=1;ensembl_end_phase=2;rank=7 chr6 . CDS 1607797 1607909 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=6 chr6 . exon 1607797 1607909 . - . ID=Thaps34782.6;Parent=Thaps34782;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 1608001 1608047 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=5 chr6 . exon 1608001 1608047 . - . ID=Thaps34782.5;Parent=Thaps34782;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1608131 1608251 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=4 chr6 . exon 1608131 1608251 . - . ID=Thaps34782.4;Parent=Thaps34782;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1608360 1608644 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=3 chr6 . exon 1608360 1608644 . - . ID=Thaps34782.3;Parent=Thaps34782;constitutive=1;rank=3 chr6 . CDS 1608684 1608755 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=2 chr6 . exon 1608684 1608755 . - . ID=Thaps34782.2;Parent=Thaps34782;constitutive=1;rank=2 chr6 . CDS 1608858 1608977 . - 0 ID=Thaps34782;Parent=Thaps34782;rank=1 chr6 . exon 1608858 1608977 . - . ID=Thaps34782.1;Parent=Thaps34782;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1609765 1611372 . + . ID=Thaps6451;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4C8];external_name=Thaps6451;logic_name=jgi_thaps3 chr6 ensembl transcript 1609765 1611372 . + . ID=Thaps6451;Parent=Thaps6451;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1609765 1610070 . + 0 ID=Thaps6451;Parent=Thaps6451;rank=1 chr6 . exon 1609765 1610070 . + . ID=Thaps6451.1;Parent=Thaps6451;constitutive=1;rank=1 chr6 . CDS 1610179 1611372 . + 0 ID=Thaps6451;Parent=Thaps6451;rank=2 chr6 . exon 1610179 1611372 . + . ID=Thaps6451.2;Parent=Thaps6451;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1611716 1613140 . + . ID=Thaps6452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4C9];external_name=Thaps6452;logic_name=jgi_thaps3 chr6 ensembl transcript 1611716 1613140 . + . ID=Thaps6452;Parent=Thaps6452;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1611716 1612061 . + 0 ID=Thaps6452;Parent=Thaps6452;rank=1 chr6 . exon 1611716 1612061 . + . ID=Thaps6452.1;Parent=Thaps6452;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1612144 1612187 . + 0 ID=Thaps6452;Parent=Thaps6452;rank=2 chr6 . exon 1612144 1612187 . + . ID=Thaps6452.2;Parent=Thaps6452;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1612568 1613140 . + 0 ID=Thaps6452;Parent=Thaps6452;rank=3 chr6 . exon 1612568 1613140 . + . ID=Thaps6452.3;Parent=Thaps6452;constitutive=1;rank=3 chr6 ensembl gene 1617343 1618133 . - . ID=Thaps262994;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr6 ensembl transcript 1617343 1618133 . - . ID=Thaps262994;Parent=Thaps262994;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr6 . exon 1617343 1617803 . - . ID=Thaps262994.3;Parent=Thaps262994;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . exon 1617885 1618000 . - . ID=Thaps262994.2;Parent=Thaps262994;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . exon 1618076 1618133 . - . ID=Thaps262994.1;Parent=Thaps262994;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1616279 1617148 . + . ID=Thaps34851;biotype=protein_coding;description=Inorganic polyphosphate/ATP-NAD kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C4D1];external_name=Thaps34851;logic_name=jgi_thaps3 chr6 ensembl transcript 1616279 1617148 . + . ID=Thaps34851;Parent=Thaps34851;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1616279 1616438 . + 0 ID=Thaps34851;Parent=Thaps34851;rank=1 chr6 . exon 1616279 1616438 . + . ID=Thaps34851.1;Parent=Thaps34851;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1616577 1617148 . + 0 ID=Thaps34851;Parent=Thaps34851;rank=2 chr6 . exon 1616577 1617148 . + . ID=Thaps34851.2;Parent=Thaps34851;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1618478 1620595 . + . ID=Thaps6456;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4D2];external_name=Thaps6456;logic_name=jgi_thaps3 chr6 ensembl transcript 1618478 1620595 . + . ID=Thaps6456;Parent=Thaps6456;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1618478 1620595 . + 0 ID=Thaps6456;Parent=Thaps6456;rank=1 chr6 . exon 1618478 1620595 . + . ID=Thaps6456.1;Parent=Thaps6456;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1620656 1622952 . - . ID=Thaps6457;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4D3];external_name=Thaps6457;logic_name=jgi_thaps3 chr6 ensembl transcript 1620656 1622952 . - . ID=Thaps6457;Parent=Thaps6457;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1620656 1620963 . - 0 ID=Thaps6457;Parent=Thaps6457;rank=4 chr6 . exon 1620656 1620963 . - . ID=Thaps6457.4;Parent=Thaps6457;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1621041 1622009 . - 0 ID=Thaps6457;Parent=Thaps6457;rank=3 chr6 . exon 1621041 1622009 . - . ID=Thaps6457.3;Parent=Thaps6457;constitutive=1;rank=3 chr6 . CDS 1622085 1622371 . - 0 ID=Thaps6457;Parent=Thaps6457;rank=2 chr6 . exon 1622085 1622371 . - . ID=Thaps6457.2;Parent=Thaps6457;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1622465 1622952 . - 0 ID=Thaps6457;Parent=Thaps6457;rank=1 chr6 . exon 1622465 1622952 . - . ID=Thaps6457.1;Parent=Thaps6457;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1623181 1626941 . - . ID=Thaps6458;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4D4];external_name=Thaps6458;logic_name=jgi_thaps3 chr6 ensembl transcript 1623181 1626941 . - . ID=Thaps6458;Parent=Thaps6458;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1623181 1624458 . - 0 ID=Thaps6458;Parent=Thaps6458;rank=7 chr6 . exon 1623181 1624458 . - . ID=Thaps6458.7;Parent=Thaps6458;constitutive=1;rank=7 chr6 . CDS 1624543 1624932 . - 0 ID=Thaps6458;Parent=Thaps6458;rank=6 chr6 . CDS 1624998 1625580 . - 0 ID=Thaps6458;Parent=Thaps6458;rank=5 chr6 . CDS 1625838 1625932 . - 0 ID=Thaps6458;Parent=Thaps6458;rank=4 chr6 . CDS 1626199 1626342 . - 0 ID=Thaps6458;Parent=Thaps6458;rank=3 chr6 . CDS 1626438 1626602 . - 0 ID=Thaps6458;Parent=Thaps6458;rank=2 chr6 . CDS 1626750 1626941 . - 0 ID=Thaps6458;Parent=Thaps6458;rank=1 chr6 . repeat_region 1627032 1627050 . ? . description=dust chr6 . repeat_region 1631909 1631937 . ? . description=dust chr6 ensembl protein_coding_gene 1632101 1635624 . + . ID=Thaps35129;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4D6];external_name=Thaps35129;logic_name=jgi_thaps3 chr6 ensembl transcript 1632101 1635624 . + . ID=Thaps35129;Parent=Thaps35129;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1632101 1632616 . + 0 ID=Thaps35129;Parent=Thaps35129;rank=1 chr6 . exon 1632101 1632616 . + . ID=Thaps35129.1;Parent=Thaps35129;constitutive=1;rank=1 chr6 . CDS 1632695 1633848 . + 0 ID=Thaps35129;Parent=Thaps35129;rank=2 chr6 . exon 1632695 1633848 . + . ID=Thaps35129.2;Parent=Thaps35129;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1633930 1634182 . + 0 ID=Thaps35129;Parent=Thaps35129;rank=3 chr6 . CDS 1634272 1634697 . + 0 ID=Thaps35129;Parent=Thaps35129;rank=4 chr6 . CDS 1634872 1635354 . + 0 ID=Thaps35129;Parent=Thaps35129;rank=5 chr6 . CDS 1635433 1635624 . + 0 ID=Thaps35129;Parent=Thaps35129;rank=6 chr6 . exon 1624543 1624932 . - . ID=Thaps6458.6;Parent=Thaps6458;constitutive=1;rank=6 chr6 . exon 1624998 1625580 . - . ID=Thaps6458.5;Parent=Thaps6458;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . exon 1625838 1625932 . - . ID=Thaps6458.4;Parent=Thaps6458;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . exon 1626199 1626342 . - . ID=Thaps6458.3;Parent=Thaps6458;constitutive=1;rank=3 chr6 . exon 1626438 1626602 . - . ID=Thaps6458.2;Parent=Thaps6458;constitutive=1;rank=2 chr6 . exon 1626750 1626941 . - . ID=Thaps6458.1;Parent=Thaps6458;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1627109 1630635 . + . ID=Thaps6459;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4D5];external_name=Thaps6459;logic_name=jgi_thaps3 chr6 ensembl transcript 1627109 1630635 . + . ID=Thaps6459;Parent=Thaps6459;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1627109 1627260 . + 0 ID=Thaps6459;Parent=Thaps6459;rank=1 chr6 . exon 1627109 1627260 . + . ID=Thaps6459.1;Parent=Thaps6459;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1627485 1627621 . + 0 ID=Thaps6459;Parent=Thaps6459;rank=2 chr6 . exon 1627485 1627621 . + . ID=Thaps6459.2;Parent=Thaps6459;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1627649 1630635 . + 0 ID=Thaps6459;Parent=Thaps6459;rank=3 chr6 . exon 1627649 1630635 . + . ID=Thaps6459.3;Parent=Thaps6459;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 1638178 1642474 . + . ID=Thaps23253;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4D8];external_name=Thaps23253;logic_name=jgi_thaps3 chr6 ensembl transcript 1638178 1642474 . + . ID=Thaps23253;Parent=Thaps23253;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1638178 1641388 . + 0 ID=Thaps23253;Parent=Thaps23253;rank=1 chr6 . exon 1638178 1641388 . + . ID=Thaps23253.1;Parent=Thaps23253;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1641473 1642180 . + 0 ID=Thaps23253;Parent=Thaps23253;rank=2 chr6 . exon 1641473 1642180 . + . ID=Thaps23253.2;Parent=Thaps23253;constitutive=1;rank=2 chr6 . CDS 1642284 1642474 . + 0 ID=Thaps23253;Parent=Thaps23253;rank=3 chr6 . exon 1642284 1642474 . + . ID=Thaps23253.3;Parent=Thaps23253;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 1642714 1643316 . - . ID=Thaps23254;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4D9];external_name=Thaps23254;logic_name=jgi_thaps3 chr6 ensembl transcript 1642714 1643316 . - . ID=Thaps23254;Parent=Thaps23254;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1642714 1643316 . - 0 ID=Thaps23254;Parent=Thaps23254;rank=1 chr6 . exon 1642714 1643316 . - . ID=Thaps23254.1;Parent=Thaps23254;constitutive=1;rank=1 chr6 . exon 1633930 1634182 . + . ID=Thaps35129.3;Parent=Thaps35129;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . exon 1634272 1634697 . + . ID=Thaps35129.4;Parent=Thaps35129;constitutive=1;rank=4 chr6 . exon 1634872 1635354 . + . ID=Thaps35129.5;Parent=Thaps35129;constitutive=1;rank=5 chr6 . exon 1635433 1635624 . + . ID=Thaps35129.6;Parent=Thaps35129;constitutive=1;rank=6 chr6 ensembl protein_coding_gene 1636946 1637773 . - . ID=Thaps6461;biotype=protein_coding;description=Anamorsin homolog [Source:UniProtKB/Swiss-Prot%3BAcc:B8C4D7];external_name=Thaps6461;logic_name=jgi_thaps3 chr6 ensembl transcript 1636946 1637773 . - . ID=Thaps6461;Parent=Thaps6461;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1636946 1637773 . - 0 ID=Thaps6461;Parent=Thaps6461;rank=1 chr6 . exon 1636946 1637773 . - . ID=Thaps6461.1;Parent=Thaps6461;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1651295 1653340 . + . ID=Thaps269169;biotype=protein_coding;description=Beach domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4E2];external_name=Thaps269169;logic_name=jgi_thaps3 chr6 ensembl transcript 1651295 1653340 . + . ID=Thaps269169;Parent=Thaps269169;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1651295 1651445 . + 0 ID=Thaps269169;Parent=Thaps269169;rank=1 chr6 . exon 1651295 1651445 . + . ID=Thaps269169.1;Parent=Thaps269169;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1651515 1651722 . + 0 ID=Thaps269169;Parent=Thaps269169;rank=2 chr6 . exon 1651515 1651722 . + . ID=Thaps269169.2;Parent=Thaps269169;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1651804 1652527 . + 0 ID=Thaps269169;Parent=Thaps269169;rank=3 chr6 . exon 1651804 1652527 . + . ID=Thaps269169.3;Parent=Thaps269169;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1652570 1653340 . + 0 ID=Thaps269169;Parent=Thaps269169;rank=4 chr6 . exon 1652570 1653340 . + . ID=Thaps269169.4;Parent=Thaps269169;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 1648997 1649164 . + . ID=Thaps34738;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4E0];external_name=Thaps34738;logic_name=jgi_thaps3 chr6 ensembl transcript 1648997 1649164 . + . ID=Thaps34738;Parent=Thaps34738;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1648997 1649164 . + 0 ID=Thaps34738;Parent=Thaps34738;rank=1 chr6 . exon 1648997 1649164 . + . ID=Thaps34738.1;Parent=Thaps34738;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1649449 1650577 . - . ID=Thaps41178;biotype=protein_coding;description=ATP phosphoribosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C4E1];external_name=Thaps41178;logic_name=jgi_thaps3 chr6 ensembl transcript 1649449 1650577 . - . ID=Thaps41178;Parent=Thaps41178;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1649449 1649757 . - 0 ID=Thaps41178;Parent=Thaps41178;rank=3 chr6 . exon 1649449 1649757 . - . ID=Thaps41178.3;Parent=Thaps41178;constitutive=1;rank=3 chr6 . CDS 1649873 1649914 . - 0 ID=Thaps41178;Parent=Thaps41178;rank=2 chr6 . exon 1649873 1649914 . - . ID=Thaps41178.2;Parent=Thaps41178;constitutive=1;rank=2 chr6 . CDS 1650053 1650577 . - 0 ID=Thaps41178;Parent=Thaps41178;rank=1 chr6 . exon 1650053 1650577 . - . ID=Thaps41178.1;Parent=Thaps41178;constitutive=1;rank=1 chr6 . repeat_region 1654403 1654438 . ? . description=trf chr6 ensembl protein_coding_gene 1656382 1657824 . - . ID=Thaps23258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4E4];external_name=Thaps23258;logic_name=jgi_thaps3 chr6 ensembl transcript 1656382 1657824 . - . ID=Thaps23258;Parent=Thaps23258;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1656382 1657405 . - 0 ID=Thaps23258;Parent=Thaps23258;rank=2 chr6 . exon 1656382 1657405 . - . ID=Thaps23258.2;Parent=Thaps23258;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1657787 1657824 . - 0 ID=Thaps23258;Parent=Thaps23258;rank=1 chr6 . exon 1657787 1657824 . - . ID=Thaps23258.1;Parent=Thaps23258;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1659977 1662875 . - . ID=Thaps23259;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4E6];external_name=Thaps23259;logic_name=jgi_thaps3 chr6 ensembl transcript 1659977 1662875 . - . ID=Thaps23259;Parent=Thaps23259;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1659977 1660247 . - 0 ID=Thaps23259;Parent=Thaps23259;rank=8 chr6 . exon 1659977 1660247 . - . ID=Thaps23259.8;Parent=Thaps23259;constitutive=1;ensembl_end_phase=1;rank=8 chr6 . CDS 1660327 1660471 . - 0 ID=Thaps23259;Parent=Thaps23259;rank=7 chr6 . exon 1660327 1660471 . - . ID=Thaps23259.7;Parent=Thaps23259;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . CDS 1660539 1660674 . - 0 ID=Thaps23259;Parent=Thaps23259;rank=6 chr6 . exon 1660539 1660674 . - . ID=Thaps23259.6;Parent=Thaps23259;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . CDS 1660763 1661141 . - 0 ID=Thaps23259;Parent=Thaps23259;rank=5 chr6 . exon 1660763 1661141 . - . ID=Thaps23259.5;Parent=Thaps23259;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 1661247 1661368 . - 0 ID=Thaps23259;Parent=Thaps23259;rank=4 chr6 . exon 1661247 1661368 . - . ID=Thaps23259.4;Parent=Thaps23259;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1661427 1661481 . - 0 ID=Thaps23259;Parent=Thaps23259;rank=3 chr6 . exon 1661427 1661481 . - . ID=Thaps23259.3;Parent=Thaps23259;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1661691 1662508 . - 0 ID=Thaps23259;Parent=Thaps23259;rank=2 chr6 . exon 1661691 1662508 . - . ID=Thaps23259.2;Parent=Thaps23259;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1662615 1662875 . - 0 ID=Thaps23259;Parent=Thaps23259;rank=1 chr6 . exon 1662615 1662875 . - . ID=Thaps23259.1;Parent=Thaps23259;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1655648 1655887 . + . ID=Thaps35116;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4E3];external_name=Thaps35116;logic_name=jgi_thaps3 chr6 ensembl transcript 1655648 1655887 . + . ID=Thaps35116;Parent=Thaps35116;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1655648 1655887 . + 0 ID=Thaps35116;Parent=Thaps35116;rank=1 chr6 . exon 1655648 1655887 . + . ID=Thaps35116.1;Parent=Thaps35116;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1658479 1659782 . + . ID=Thaps6468;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4E5];external_name=Thaps6468;logic_name=jgi_thaps3 chr6 ensembl transcript 1658479 1659782 . + . ID=Thaps6468;Parent=Thaps6468;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1658479 1659132 . + 0 ID=Thaps6468;Parent=Thaps6468;rank=1 chr6 . exon 1658479 1659132 . + . ID=Thaps6468.1;Parent=Thaps6468;constitutive=1;rank=1 chr6 . CDS 1659203 1659276 . + 0 ID=Thaps6468;Parent=Thaps6468;rank=2 chr6 . exon 1659203 1659276 . + . ID=Thaps6468.2;Parent=Thaps6468;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1659347 1659782 . + 0 ID=Thaps6468;Parent=Thaps6468;rank=3 chr6 . exon 1659347 1659782 . + . ID=Thaps6468.3;Parent=Thaps6468;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 1666532 1667933 . - . ID=Thaps23261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4E8];external_name=Thaps23261;logic_name=jgi_thaps3 chr6 ensembl transcript 1666532 1667933 . - . ID=Thaps23261;Parent=Thaps23261;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1666532 1666639 . - 0 ID=Thaps23261;Parent=Thaps23261;rank=4 chr6 . exon 1666532 1666639 . - . ID=Thaps23261.4;Parent=Thaps23261;constitutive=1;rank=4 chr6 . CDS 1666721 1667000 . - 0 ID=Thaps23261;Parent=Thaps23261;rank=3 chr6 . exon 1666721 1667000 . - . ID=Thaps23261.3;Parent=Thaps23261;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1667098 1667329 . - 0 ID=Thaps23261;Parent=Thaps23261;rank=2 chr6 . exon 1667098 1667329 . - . ID=Thaps23261.2;Parent=Thaps23261;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1667417 1667933 . - 0 ID=Thaps23261;Parent=Thaps23261;rank=1 chr6 . exon 1667417 1667933 . - . ID=Thaps23261.1;Parent=Thaps23261;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1671854 1675194 . - . ID=Thaps23262;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4F1];external_name=Thaps23262;logic_name=jgi_thaps3 chr6 ensembl transcript 1671854 1675194 . - . ID=Thaps23262;Parent=Thaps23262;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1671854 1672112 . - 0 ID=Thaps23262;Parent=Thaps23262;rank=8 chr6 . exon 1671854 1672112 . - . ID=Thaps23262.8;Parent=Thaps23262;constitutive=1;ensembl_end_phase=1;rank=8 chr6 . CDS 1672181 1672738 . - 0 ID=Thaps23262;Parent=Thaps23262;rank=7 chr6 . exon 1672181 1672738 . - . ID=Thaps23262.7;Parent=Thaps23262;constitutive=1;rank=7 chr6 . CDS 1672819 1672976 . - 0 ID=Thaps23262;Parent=Thaps23262;rank=6 chr6 . exon 1672819 1672976 . - . ID=Thaps23262.6;Parent=Thaps23262;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 1673058 1673546 . - 0 ID=Thaps23262;Parent=Thaps23262;rank=5 chr6 . exon 1673058 1673546 . - . ID=Thaps23262.5;Parent=Thaps23262;constitutive=1;rank=5 chr6 . CDS 1673712 1673880 . - 0 ID=Thaps23262;Parent=Thaps23262;rank=4 chr6 . CDS 1674169 1674214 . - 0 ID=Thaps23262;Parent=Thaps23262;rank=3 chr6 . CDS 1674312 1674473 . - 0 ID=Thaps23262;Parent=Thaps23262;rank=2 chr6 . CDS 1674600 1675194 . - 0 ID=Thaps23262;Parent=Thaps23262;rank=1 chr6 ensembl protein_coding_gene 1663992 1665321 . + . ID=Thaps263000;biotype=protein_coding;description=U2 snRNP auxillary splicing factor%2C U2AF subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C4E7];external_name=Thaps263000;logic_name=jgi_thaps3 chr6 ensembl transcript 1663992 1665321 . + . ID=Thaps263000;Parent=Thaps263000;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1663992 1664606 . + 0 ID=Thaps263000;Parent=Thaps263000;rank=1 chr6 . exon 1663992 1664606 . + . ID=Thaps263000.1;Parent=Thaps263000;constitutive=1;rank=1 chr6 . CDS 1664790 1665068 . + 0 ID=Thaps263000;Parent=Thaps263000;rank=2 chr6 . exon 1664790 1665068 . + . ID=Thaps263000.2;Parent=Thaps263000;constitutive=1;rank=2 chr6 . CDS 1665157 1665321 . + 0 ID=Thaps263000;Parent=Thaps263000;rank=3 chr6 . exon 1665157 1665321 . + . ID=Thaps263000.3;Parent=Thaps263000;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1668616 1669698 . - . ID=Thaps6472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4E9];external_name=Thaps6472;logic_name=jgi_thaps3 chr6 ensembl transcript 1668616 1669698 . - . ID=Thaps6472;Parent=Thaps6472;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1668616 1669698 . - 0 ID=Thaps6472;Parent=Thaps6472;rank=1 chr6 . exon 1668616 1669698 . - . ID=Thaps6472.1;Parent=Thaps6472;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1670190 1671709 . + . ID=Thaps6473;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4F0];external_name=Thaps6473;logic_name=jgi_thaps3 chr6 ensembl transcript 1670190 1671709 . + . ID=Thaps6473;Parent=Thaps6473;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1670190 1671329 . + 0 ID=Thaps6473;Parent=Thaps6473;rank=1 chr6 . exon 1670190 1671329 . + . ID=Thaps6473.1;Parent=Thaps6473;constitutive=1;rank=1 chr6 . CDS 1671413 1671709 . + 0 ID=Thaps6473;Parent=Thaps6473;rank=2 chr6 . exon 1671413 1671709 . + . ID=Thaps6473.2;Parent=Thaps6473;constitutive=1;rank=2 chr6 . repeat_region 1675361 1675368 . ? . description=dust chr6 . exon 1673712 1673880 . - . ID=Thaps23262.4;Parent=Thaps23262;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . exon 1674169 1674214 . - . ID=Thaps23262.3;Parent=Thaps23262;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . exon 1674312 1674473 . - . ID=Thaps23262.2;Parent=Thaps23262;constitutive=1;rank=2 chr6 . exon 1674600 1675194 . - . ID=Thaps23262.1;Parent=Thaps23262;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1675644 1678496 . + . ID=Thaps23263;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4F2];external_name=Thaps23263;logic_name=jgi_thaps3 chr6 ensembl transcript 1675644 1678496 . + . ID=Thaps23263;Parent=Thaps23263;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1675644 1678496 . + 0 ID=Thaps23263;Parent=Thaps23263;rank=1 chr6 . exon 1675644 1678496 . + . ID=Thaps23263.1;Parent=Thaps23263;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1681607 1683427 . - . ID=Thaps23264;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4F4];external_name=Thaps23264;logic_name=jgi_thaps3 chr6 ensembl transcript 1681607 1683427 . - . ID=Thaps23264;Parent=Thaps23264;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1681607 1682687 . - 0 ID=Thaps23264;Parent=Thaps23264;rank=3 chr6 . exon 1681607 1682687 . - . ID=Thaps23264.3;Parent=Thaps23264;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1682789 1682996 . - 0 ID=Thaps23264;Parent=Thaps23264;rank=2 chr6 . exon 1682789 1682996 . - . ID=Thaps23264.2;Parent=Thaps23264;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1683088 1683427 . - 0 ID=Thaps23264;Parent=Thaps23264;rank=1 chr6 . exon 1683088 1683427 . - . ID=Thaps23264.1;Parent=Thaps23264;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1678661 1679293 . - . ID=Thaps6476;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4F3];external_name=Thaps6476;logic_name=jgi_thaps3 chr6 ensembl transcript 1678661 1679293 . - . ID=Thaps6476;Parent=Thaps6476;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1678661 1678741 . - 0 ID=Thaps6476;Parent=Thaps6476;rank=4 chr6 . exon 1678661 1678741 . - . ID=Thaps6476.4;Parent=Thaps6476;constitutive=1;rank=4 chr6 . CDS 1678767 1678989 . - 0 ID=Thaps6476;Parent=Thaps6476;rank=3 chr6 . exon 1678767 1678989 . - . ID=Thaps6476.3;Parent=Thaps6476;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1679072 1679145 . - 0 ID=Thaps6476;Parent=Thaps6476;rank=2 chr6 . exon 1679072 1679145 . - . ID=Thaps6476.2;Parent=Thaps6476;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1679225 1679293 . - 0 ID=Thaps6476;Parent=Thaps6476;rank=1 chr6 . exon 1679225 1679293 . - . ID=Thaps6476.1;Parent=Thaps6476;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1685471 1686307 . - . ID=Thaps15142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4F6];external_name=Thaps15142;logic_name=jgi_thaps3 chr6 ensembl transcript 1685471 1686307 . - . ID=Thaps15142;Parent=Thaps15142;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1685471 1686307 . - 0 ID=Thaps15142;Parent=Thaps15142;rank=1 chr6 . exon 1685471 1686307 . - . ID=Thaps15142.1;Parent=Thaps15142;constitutive=1;rank=1 chr6 ensembl gene 1689464 1689918 . - . ID=Thaps263001;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr6 ensembl transcript 1689464 1689918 . - . ID=Thaps263001;Parent=Thaps263001;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr6 . exon 1689464 1689509 . - . ID=Thaps263001.2;Parent=Thaps263001;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . exon 1689543 1689918 . - . ID=Thaps263001.1;Parent=Thaps263001;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1690481 1690873 . + . ID=Thaps263002;biotype=protein_coding;description=Putative uncharacterized protein HSF23 [Source:UniProtKB/TrEMBL%3BAcc:B8C4F9];external_name=HSF23;logic_name=jgi_thaps3 chr6 ensembl transcript 1690481 1690873 . + . ID=Thaps263002;Parent=Thaps263002;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1690481 1690873 . + 0 ID=Thaps263002;Parent=Thaps263002;rank=1 chr6 . exon 1690481 1690873 . + . ID=Thaps263002.1;Parent=Thaps263002;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1683852 1685030 . + . ID=Thaps6478;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4F5];external_name=Thaps6478;logic_name=jgi_thaps3 chr6 ensembl transcript 1683852 1685030 . + . ID=Thaps6478;Parent=Thaps6478;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1683852 1685030 . + 0 ID=Thaps6478;Parent=Thaps6478;rank=1 chr6 . exon 1683852 1685030 . + . ID=Thaps6478.1;Parent=Thaps6478;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1686919 1688506 . + . ID=Thaps6480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4F7];external_name=Thaps6480;logic_name=jgi_thaps3 chr6 ensembl transcript 1686919 1688506 . + . ID=Thaps6480;Parent=Thaps6480;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1686919 1687943 . + 0 ID=Thaps6480;Parent=Thaps6480;rank=1 chr6 . exon 1686919 1687943 . + . ID=Thaps6480.1;Parent=Thaps6480;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1688031 1688162 . + 0 ID=Thaps6480;Parent=Thaps6480;rank=2 chr6 . exon 1688031 1688162 . + . ID=Thaps6480.2;Parent=Thaps6480;constitutive=1;rank=2 chr6 . CDS 1688260 1688506 . + 0 ID=Thaps6480;Parent=Thaps6480;rank=3 chr6 . exon 1688260 1688506 . + . ID=Thaps6480.3;Parent=Thaps6480;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 1688678 1689457 . - . ID=Thaps6481;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4F8];external_name=Thaps6481;logic_name=jgi_thaps3 chr6 ensembl transcript 1688678 1689457 . - . ID=Thaps6481;Parent=Thaps6481;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1688678 1689457 . - 0 ID=Thaps6481;Parent=Thaps6481;rank=1 chr6 . exon 1688678 1689457 . - . ID=Thaps6481.1;Parent=Thaps6481;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1692420 1695819 . + . ID=Thaps6483;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4G0];external_name=Thaps6483;logic_name=jgi_thaps3 chr6 ensembl transcript 1692420 1695819 . + . ID=Thaps6483;Parent=Thaps6483;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1692420 1693946 . + 0 ID=Thaps6483;Parent=Thaps6483;rank=1 chr6 . exon 1692420 1693946 . + . ID=Thaps6483.1;Parent=Thaps6483;constitutive=1;rank=1 chr6 . CDS 1694103 1694675 . + 0 ID=Thaps6483;Parent=Thaps6483;rank=2 chr6 . CDS 1694971 1695819 . + 0 ID=Thaps6483;Parent=Thaps6483;rank=3 chr6 . repeat_region 1696243 1696254 . ? . description=dust chr6 . biological_region 1697510 1697512 0.999 + . logic_name=eponine chr6 . repeat_region 1698060 1698068 . ? . description=dust chr6 . repeat_region 1699473 1699503 . ? . description=trf chr6 ensembl protein_coding_gene 1700087 1701172 . + . ID=Thaps15977;biotype=protein_coding;description=Diacylglycerol kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C4G2];external_name=DGK;logic_name=jgi_thaps3 chr6 ensembl transcript 1700087 1701172 . + . ID=Thaps15977;Parent=Thaps15977;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1700087 1700825 . + 0 ID=Thaps15977;Parent=Thaps15977;rank=1 chr6 . exon 1700087 1700825 . + . ID=Thaps15977.1;Parent=Thaps15977;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1700985 1701172 . + 0 ID=Thaps15977;Parent=Thaps15977;rank=2 chr6 . exon 1700985 1701172 . + . ID=Thaps15977.2;Parent=Thaps15977;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1696574 1698010 . - . ID=Thaps34810;biotype=protein_coding;description=Calreticulin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4G1];external_name=Thaps34810;logic_name=jgi_thaps3 chr6 ensembl transcript 1696574 1698010 . - . ID=Thaps34810;Parent=Thaps34810;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1696574 1697617 . - 0 ID=Thaps34810;Parent=Thaps34810;rank=2 chr6 . exon 1696574 1697617 . - . ID=Thaps34810.2;Parent=Thaps34810;constitutive=1;rank=2 chr6 . CDS 1697927 1698010 . - 0 ID=Thaps34810;Parent=Thaps34810;rank=1 chr6 . exon 1697927 1698010 . - . ID=Thaps34810.1;Parent=Thaps34810;constitutive=1;rank=1 chr6 . exon 1694103 1694675 . + . ID=Thaps6483.2;Parent=Thaps6483;constitutive=1;rank=2 chr6 . exon 1694971 1695819 . + . ID=Thaps6483.3;Parent=Thaps6483;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1701585 1702541 . - . ID=Thaps6486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4G3];external_name=Thaps6486;logic_name=jgi_thaps3 chr6 ensembl transcript 1701585 1702541 . - . ID=Thaps6486;Parent=Thaps6486;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1701585 1702541 . - 0 ID=Thaps6486;Parent=Thaps6486;rank=1 chr6 . exon 1701585 1702541 . - . ID=Thaps6486.1;Parent=Thaps6486;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1703191 1706661 . - . ID=Thaps23269;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4G4];external_name=Thaps23269;logic_name=jgi_thaps3 chr6 ensembl transcript 1703191 1706661 . - . ID=Thaps23269;Parent=Thaps23269;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1703191 1706661 . - 0 ID=Thaps23269;Parent=Thaps23269;rank=1 chr6 . exon 1703191 1706661 . - . ID=Thaps23269.1;Parent=Thaps23269;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1706968 1709219 . + . ID=Thaps23270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4G5];external_name=Thaps23270;logic_name=jgi_thaps3 chr6 ensembl transcript 1706968 1709219 . + . ID=Thaps23270;Parent=Thaps23270;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1706968 1707711 . + 0 ID=Thaps23270;Parent=Thaps23270;rank=1 chr6 . exon 1706968 1707711 . + . ID=Thaps23270.1;Parent=Thaps23270;constitutive=1;rank=1 chr6 . CDS 1707831 1709219 . + 0 ID=Thaps23270;Parent=Thaps23270;rank=2 chr6 . exon 1707831 1709219 . + . ID=Thaps23270.2;Parent=Thaps23270;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1711697 1713379 . - . ID=Thaps23271;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4G7];external_name=Thaps23271;logic_name=jgi_thaps3 chr6 ensembl transcript 1711697 1713379 . - . ID=Thaps23271;Parent=Thaps23271;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1711697 1712379 . - 0 ID=Thaps23271;Parent=Thaps23271;rank=2 chr6 . exon 1711697 1712379 . - . ID=Thaps23271.2;Parent=Thaps23271;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1712482 1713379 . - 0 ID=Thaps23271;Parent=Thaps23271;rank=1 chr6 . exon 1712482 1713379 . - . ID=Thaps23271.1;Parent=Thaps23271;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1709360 1710823 . - . ID=Thaps6489;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4G6];external_name=Thaps6489;logic_name=jgi_thaps3 chr6 ensembl transcript 1709360 1710823 . - . ID=Thaps6489;Parent=Thaps6489;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1709360 1710256 . - 0 ID=Thaps6489;Parent=Thaps6489;rank=2 chr6 . exon 1709360 1710256 . - . ID=Thaps6489.2;Parent=Thaps6489;constitutive=1;rank=2 chr6 . CDS 1710347 1710823 . - 0 ID=Thaps6489;Parent=Thaps6489;rank=1 chr6 . exon 1710347 1710823 . - . ID=Thaps6489.1;Parent=Thaps6489;constitutive=1;rank=1 chr6 . repeat_region 1714451 1714458 . ? . description=dust chr6 . repeat_region 1722553 1722560 . ? . description=dust chr6 ensembl protein_coding_gene 1714485 1715675 . - . ID=Thaps23272;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4G9];external_name=Thaps23272;logic_name=jgi_thaps3 chr6 ensembl transcript 1714485 1715675 . - . ID=Thaps23272;Parent=Thaps23272;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1714485 1715246 . - 0 ID=Thaps23272;Parent=Thaps23272;rank=2 chr6 . exon 1714485 1715246 . - . ID=Thaps23272.2;Parent=Thaps23272;constitutive=1;rank=2 chr6 . CDS 1715352 1715675 . - 0 ID=Thaps23272;Parent=Thaps23272;rank=1 chr6 . exon 1715352 1715675 . - . ID=Thaps23272.1;Parent=Thaps23272;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1716136 1718401 . + . ID=Thaps23273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4H0];external_name=Thaps23273;logic_name=jgi_thaps3 chr6 ensembl transcript 1716136 1718401 . + . ID=Thaps23273;Parent=Thaps23273;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1716136 1717673 . + 0 ID=Thaps23273;Parent=Thaps23273;rank=1 chr6 . exon 1716136 1717673 . + . ID=Thaps23273.1;Parent=Thaps23273;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1717762 1718401 . + 0 ID=Thaps23273;Parent=Thaps23273;rank=2 chr6 . exon 1717762 1718401 . + . ID=Thaps23273.2;Parent=Thaps23273;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1719333 1723189 . - . ID=Thaps23274;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4H1];external_name=Thaps23274;logic_name=jgi_thaps3 chr6 ensembl transcript 1719333 1723189 . - . ID=Thaps23274;Parent=Thaps23274;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1719333 1719367 . - 0 ID=Thaps23274;Parent=Thaps23274;rank=5 chr6 . exon 1719333 1719367 . - . ID=Thaps23274.5;Parent=Thaps23274;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1719393 1721505 . - 0 ID=Thaps23274;Parent=Thaps23274;rank=4 chr6 . exon 1719393 1721505 . - . ID=Thaps23274.4;Parent=Thaps23274;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1721543 1721828 . - 0 ID=Thaps23274;Parent=Thaps23274;rank=3 chr6 . exon 1721543 1721828 . - . ID=Thaps23274.3;Parent=Thaps23274;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1721970 1722580 . - 0 ID=Thaps23274;Parent=Thaps23274;rank=2 chr6 . exon 1721970 1722580 . - . ID=Thaps23274.2;Parent=Thaps23274;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1722809 1723189 . - 0 ID=Thaps23274;Parent=Thaps23274;rank=1 chr6 . exon 1722809 1723189 . - . ID=Thaps23274.1;Parent=Thaps23274;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1713509 1714315 . + . ID=Thaps6491;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4G8];external_name=Thaps6491;logic_name=jgi_thaps3 chr6 ensembl transcript 1713509 1714315 . + . ID=Thaps6491;Parent=Thaps6491;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1713509 1714315 . + 0 ID=Thaps6491;Parent=Thaps6491;rank=1 chr6 . exon 1713509 1714315 . + . ID=Thaps6491.1;Parent=Thaps6491;constitutive=1;rank=1 chr6 . repeat_region 1726506 1726529 . ? . description=trf chr6 ensembl protein_coding_gene 1731417 1732777 . + . ID=Thaps13909;biotype=protein_coding;description=Eh domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4H7];external_name=Thaps13909;logic_name=jgi_thaps3 chr6 ensembl transcript 1731417 1732777 . + . ID=Thaps13909;Parent=Thaps13909;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1731417 1731581 . + 0 ID=Thaps13909;Parent=Thaps13909;rank=1 chr6 . exon 1731417 1731581 . + . ID=Thaps13909.1;Parent=Thaps13909;constitutive=1;rank=1 chr6 . CDS 1731668 1731793 . + 0 ID=Thaps13909;Parent=Thaps13909;rank=2 chr6 . exon 1731668 1731793 . + . ID=Thaps13909.2;Parent=Thaps13909;constitutive=1;rank=2 chr6 . CDS 1731914 1732777 . + 0 ID=Thaps13909;Parent=Thaps13909;rank=3 chr6 . exon 1731914 1732777 . + . ID=Thaps13909.3;Parent=Thaps13909;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 1723381 1724321 . + . ID=Thaps23275;biotype=protein_coding;description=Pyrroline-5-carboxylate reductase [Source:UniProtKB/TrEMBL%3BAcc:B8C4H2];external_name=Thaps23275;logic_name=jgi_thaps3 chr6 ensembl transcript 1723381 1724321 . + . ID=Thaps23275;Parent=Thaps23275;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1723381 1724123 . + 0 ID=Thaps23275;Parent=Thaps23275;rank=1 chr6 . exon 1723381 1724123 . + . ID=Thaps23275.1;Parent=Thaps23275;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1724216 1724321 . + 0 ID=Thaps23275;Parent=Thaps23275;rank=2 chr6 . exon 1724216 1724321 . + . ID=Thaps23275.2;Parent=Thaps23275;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1726747 1729488 . + . ID=Thaps23277;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4H4];external_name=Thaps23277;logic_name=jgi_thaps3 chr6 ensembl transcript 1726747 1729488 . + . ID=Thaps23277;Parent=Thaps23277;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1726747 1728332 . + 0 ID=Thaps23277;Parent=Thaps23277;rank=1 chr6 . exon 1726747 1728332 . + . ID=Thaps23277.1;Parent=Thaps23277;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1728603 1729488 . + 0 ID=Thaps23277;Parent=Thaps23277;rank=2 chr6 . exon 1728603 1729488 . + . ID=Thaps23277.2;Parent=Thaps23277;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1729695 1730234 . - . ID=Thaps263006;biotype=protein_coding;description=Prolyl 4-hydrolase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4H5];external_name=Thaps263006;logic_name=jgi_thaps3 chr6 ensembl transcript 1729695 1730234 . - . ID=Thaps263006;Parent=Thaps263006;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1729695 1730234 . - 0 ID=Thaps263006;Parent=Thaps263006;rank=1 chr6 . exon 1729695 1730234 . - . ID=Thaps263006.1;Parent=Thaps263006;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1730443 1730861 . - . ID=Thaps263007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4H6];external_name=Thaps263007;logic_name=jgi_thaps3 chr6 ensembl transcript 1730443 1730861 . - . ID=Thaps263007;Parent=Thaps263007;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1730443 1730594 . - 0 ID=Thaps263007;Parent=Thaps263007;rank=2 chr6 . exon 1730443 1730594 . - . ID=Thaps263007.2;Parent=Thaps263007;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1730727 1730861 . - 0 ID=Thaps263007;Parent=Thaps263007;rank=1 chr6 . exon 1730727 1730861 . - . ID=Thaps263007.1;Parent=Thaps263007;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1724886 1725884 . - . ID=Thaps34959;biotype=protein_coding;description=tRNA-dihydrouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C4H3];external_name=Thaps34959;logic_name=jgi_thaps3 chr6 ensembl transcript 1724886 1725884 . - . ID=Thaps34959;Parent=Thaps34959;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1724886 1725884 . - 0 ID=Thaps34959;Parent=Thaps34959;rank=1 chr6 . exon 1724886 1725884 . - . ID=Thaps34959.1;Parent=Thaps34959;constitutive=1;rank=1 chr6 . repeat_region 1741415 1741422 . ? . description=dust chr6 ensembl protein_coding_gene 1733566 1734327 . - . ID=Thaps23278;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4H8];external_name=Thaps23278;logic_name=jgi_thaps3 chr6 ensembl transcript 1733566 1734327 . - . ID=Thaps23278;Parent=Thaps23278;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1733566 1734327 . - 0 ID=Thaps23278;Parent=Thaps23278;rank=1 chr6 . exon 1733566 1734327 . - . ID=Thaps23278.1;Parent=Thaps23278;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1740549 1746100 . + . ID=Thaps23279;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4I1];external_name=Thaps23279;logic_name=jgi_thaps3 chr6 ensembl transcript 1740549 1746100 . + . ID=Thaps23279;Parent=Thaps23279;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1740549 1741457 . + 0 ID=Thaps23279;Parent=Thaps23279;rank=1 chr6 . exon 1740549 1741457 . + . ID=Thaps23279.1;Parent=Thaps23279;constitutive=1;rank=1 chr6 . CDS 1741540 1743511 . + 0 ID=Thaps23279;Parent=Thaps23279;rank=2 chr6 . exon 1741540 1743511 . + . ID=Thaps23279.2;Parent=Thaps23279;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1743588 1744040 . + 0 ID=Thaps23279;Parent=Thaps23279;rank=3 chr6 . CDS 1744092 1745038 . + 0 ID=Thaps23279;Parent=Thaps23279;rank=4 chr6 . CDS 1745120 1746100 . + 0 ID=Thaps23279;Parent=Thaps23279;rank=5 chr6 ensembl protein_coding_gene 1734731 1736965 . + . ID=Thaps263010;biotype=protein_coding;description=ATP dependent DNA ligase 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C4H9];external_name=Thaps263010;logic_name=jgi_thaps3 chr6 ensembl transcript 1734731 1736965 . + . ID=Thaps263010;Parent=Thaps263010;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1734731 1735034 . + 0 ID=Thaps263010;Parent=Thaps263010;rank=1 chr6 . exon 1734731 1735034 . + . ID=Thaps263010.1;Parent=Thaps263010;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1735302 1735491 . + 0 ID=Thaps263010;Parent=Thaps263010;rank=2 chr6 . exon 1735302 1735491 . + . ID=Thaps263010.2;Parent=Thaps263010;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1735599 1735755 . + 0 ID=Thaps263010;Parent=Thaps263010;rank=3 chr6 . exon 1735599 1735755 . + . ID=Thaps263010.3;Parent=Thaps263010;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1735795 1735824 . + 0 ID=Thaps263010;Parent=Thaps263010;rank=4 chr6 . exon 1735795 1735824 . + . ID=Thaps263010.4;Parent=Thaps263010;constitutive=1;rank=4 chr6 . CDS 1735855 1736965 . + 0 ID=Thaps263010;Parent=Thaps263010;rank=5 chr6 . exon 1735855 1736965 . + . ID=Thaps263010.5;Parent=Thaps263010;constitutive=1;ensembl_end_phase=1;rank=5 chr6 ensembl protein_coding_gene 1737440 1739820 . - . ID=Thaps263012;biotype=protein_coding;description=Ras-related protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4I0];external_name=Thaps263012;logic_name=jgi_thaps3 chr6 ensembl transcript 1737440 1739820 . - . ID=Thaps263012;Parent=Thaps263012;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1737440 1737831 . - 0 ID=Thaps263012;Parent=Thaps263012;rank=6 chr6 . exon 1737440 1737831 . - . ID=Thaps263012.6;Parent=Thaps263012;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 1737853 1738253 . - 0 ID=Thaps263012;Parent=Thaps263012;rank=5 chr6 . exon 1737853 1738253 . - . ID=Thaps263012.5;Parent=Thaps263012;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1738440 1738785 . - 0 ID=Thaps263012;Parent=Thaps263012;rank=4 chr6 . exon 1738440 1738785 . - . ID=Thaps263012.4;Parent=Thaps263012;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1738855 1739184 . - 0 ID=Thaps263012;Parent=Thaps263012;rank=3 chr6 . exon 1738855 1739184 . - . ID=Thaps263012.3;Parent=Thaps263012;constitutive=1;rank=3 chr6 . CDS 1739209 1739377 . - 0 ID=Thaps263012;Parent=Thaps263012;rank=2 chr6 . exon 1739209 1739377 . - . ID=Thaps263012.2;Parent=Thaps263012;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1739648 1739820 . - 0 ID=Thaps263012;Parent=Thaps263012;rank=1 chr6 . exon 1739648 1739820 . - . ID=Thaps263012.1;Parent=Thaps263012;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 1747282 1747301 . ? . description=trf chr6 . exon 1743588 1744040 . + . ID=Thaps23279.3;Parent=Thaps23279;constitutive=1;rank=3 chr6 . exon 1744092 1745038 . + . ID=Thaps23279.4;Parent=Thaps23279;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . exon 1745120 1746100 . + . ID=Thaps23279.5;Parent=Thaps23279;constitutive=1;rank=5 chr6 ensembl protein_coding_gene 1748769 1753760 . - . ID=Thaps28795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4I4];external_name=Thaps28795;logic_name=jgi_thaps3 chr6 ensembl transcript 1748769 1753760 . - . ID=Thaps28795;Parent=Thaps28795;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1748769 1749351 . - 0 ID=Thaps28795;Parent=Thaps28795;rank=5 chr6 . exon 1748769 1749351 . - . ID=Thaps28795.5;Parent=Thaps28795;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 1749432 1749717 . - 0 ID=Thaps28795;Parent=Thaps28795;rank=4 chr6 . exon 1749432 1749717 . - . ID=Thaps28795.4;Parent=Thaps28795;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1750312 1750652 . - 0 ID=Thaps28795;Parent=Thaps28795;rank=3 chr6 . exon 1750312 1750652 . - . ID=Thaps28795.3;Parent=Thaps28795;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1751175 1751777 . - 0 ID=Thaps28795;Parent=Thaps28795;rank=2 chr6 . exon 1751175 1751777 . - . ID=Thaps28795.2;Parent=Thaps28795;constitutive=1;rank=2 chr6 . CDS 1753621 1753760 . - 0 ID=Thaps28795;Parent=Thaps28795;rank=1 chr6 ensembl protein_coding_gene 1746182 1747753 . - . ID=Thaps6504;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4I2];external_name=Thaps6504;logic_name=jgi_thaps3 chr6 ensembl transcript 1746182 1747753 . - . ID=Thaps6504;Parent=Thaps6504;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1746182 1747753 . - 0 ID=Thaps6504;Parent=Thaps6504;rank=1 chr6 . exon 1746182 1747753 . - . ID=Thaps6504.1;Parent=Thaps6504;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1748048 1748641 . + . ID=Thaps6505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4I3];external_name=Thaps6505;logic_name=jgi_thaps3 chr6 ensembl transcript 1748048 1748641 . + . ID=Thaps6505;Parent=Thaps6505;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1748048 1748641 . + 0 ID=Thaps6505;Parent=Thaps6505;rank=1 chr6 . exon 1748048 1748641 . + . ID=Thaps6505.1;Parent=Thaps6505;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1758422 1758742 . - . ID=Thaps23283;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4I6];external_name=Thaps23283;logic_name=jgi_thaps3 chr6 ensembl transcript 1758422 1758742 . - . ID=Thaps23283;Parent=Thaps23283;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1758422 1758742 . - 0 ID=Thaps23283;Parent=Thaps23283;rank=1 chr6 . exon 1758422 1758742 . - . ID=Thaps23283.1;Parent=Thaps23283;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1759438 1762245 . + . ID=Thaps23284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4I7];external_name=Thaps23284;logic_name=jgi_thaps3 chr6 ensembl transcript 1759438 1762245 . + . ID=Thaps23284;Parent=Thaps23284;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1759438 1760205 . + 0 ID=Thaps23284;Parent=Thaps23284;rank=1 chr6 . exon 1759438 1760205 . + . ID=Thaps23284.1;Parent=Thaps23284;constitutive=1;rank=1 chr6 . CDS 1760263 1762245 . + 0 ID=Thaps23284;Parent=Thaps23284;rank=2 chr6 . exon 1760263 1762245 . + . ID=Thaps23284.2;Parent=Thaps23284;constitutive=1;rank=2 chr6 . exon 1753621 1753760 . - . ID=Thaps28795.1;Parent=Thaps28795;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1756664 1757491 . + . ID=Thaps34830;biotype=protein_coding;description=Oxygen-evolving enhancer protein 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C4I5];external_name=PSBO;logic_name=jgi_thaps3 chr6 ensembl transcript 1756664 1757491 . + . ID=Thaps34830;Parent=Thaps34830;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1756664 1757491 . + 0 ID=Thaps34830;Parent=Thaps34830;rank=1 chr6 . exon 1756664 1757491 . + . ID=Thaps34830.1;Parent=Thaps34830;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1762787 1766970 . - . ID=Thaps6511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4I8];external_name=Thaps6511;logic_name=jgi_thaps3 chr6 ensembl transcript 1762787 1766970 . - . ID=Thaps6511;Parent=Thaps6511;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1762787 1763462 . - 0 ID=Thaps6511;Parent=Thaps6511;rank=7 chr6 . exon 1762787 1763462 . - . ID=Thaps6511.7;Parent=Thaps6511;constitutive=1;ensembl_end_phase=1;rank=7 chr6 . CDS 1763539 1764587 . - 0 ID=Thaps6511;Parent=Thaps6511;rank=6 chr6 . CDS 1764669 1764812 . - 0 ID=Thaps6511;Parent=Thaps6511;rank=5 chr6 . CDS 1764903 1765253 . - 0 ID=Thaps6511;Parent=Thaps6511;rank=4 chr6 . CDS 1765291 1765406 . - 0 ID=Thaps6511;Parent=Thaps6511;rank=3 chr6 . CDS 1765498 1765902 . - 0 ID=Thaps6511;Parent=Thaps6511;rank=2 chr6 . CDS 1765986 1766970 . - 0 ID=Thaps6511;Parent=Thaps6511;rank=1 chr6 . repeat_region 1763281 1763370 . ? . description=trf chr6 . repeat_region 1763381 1763409 . ? . description=trf chr6 . repeat_region 1763381 1763409 . ? . description=dust chr6 . repeat_region 1771678 1771686 . ? . description=dust chr6 ensembl protein_coding_gene 1767798 1769832 . + . ID=Thaps23285;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4I9];external_name=Thaps23285;logic_name=jgi_thaps3 chr6 ensembl transcript 1767798 1769832 . + . ID=Thaps23285;Parent=Thaps23285;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1767798 1767884 . + 0 ID=Thaps23285;Parent=Thaps23285;rank=1 chr6 . exon 1767798 1767884 . + . ID=Thaps23285.1;Parent=Thaps23285;constitutive=1;rank=1 chr6 . CDS 1767979 1769832 . + 0 ID=Thaps23285;Parent=Thaps23285;rank=2 chr6 . exon 1767979 1769832 . + . ID=Thaps23285.2;Parent=Thaps23285;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1769865 1771484 . - . ID=Thaps263019;biotype=protein_coding;description=Tocopherol cyclase [Source:UniProtKB/TrEMBL%3BAcc:B8C4J0];external_name=Thaps263019;logic_name=jgi_thaps3 chr6 ensembl transcript 1769865 1771484 . - . ID=Thaps263019;Parent=Thaps263019;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1769865 1769965 . - 0 ID=Thaps263019;Parent=Thaps263019;rank=5 chr6 . exon 1769865 1769965 . - . ID=Thaps263019.5;Parent=Thaps263019;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1770051 1770076 . - 0 ID=Thaps263019;Parent=Thaps263019;rank=4 chr6 . exon 1770051 1770076 . - . ID=Thaps263019.4;Parent=Thaps263019;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1770104 1771159 . - 0 ID=Thaps263019;Parent=Thaps263019;rank=3 chr6 . exon 1770104 1771159 . - . ID=Thaps263019.3;Parent=Thaps263019;constitutive=1;rank=3 chr6 . CDS 1771196 1771326 . - 0 ID=Thaps263019;Parent=Thaps263019;rank=2 chr6 . exon 1771196 1771326 . - . ID=Thaps263019.2;Parent=Thaps263019;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1771456 1771484 . - 0 ID=Thaps263019;Parent=Thaps263019;rank=1 chr6 . exon 1771456 1771484 . - . ID=Thaps263019.1;Parent=Thaps263019;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . exon 1763539 1764587 . - . ID=Thaps6511.6;Parent=Thaps6511;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . exon 1764669 1764812 . - . ID=Thaps6511.5;Parent=Thaps6511;constitutive=1;rank=5 chr6 . exon 1764903 1765253 . - . ID=Thaps6511.4;Parent=Thaps6511;constitutive=1;rank=4 chr6 . exon 1765291 1765406 . - . ID=Thaps6511.3;Parent=Thaps6511;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . exon 1765498 1765902 . - . ID=Thaps6511.2;Parent=Thaps6511;constitutive=1;rank=2 chr6 . exon 1765986 1766970 . - . ID=Thaps6511.1;Parent=Thaps6511;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1776070 1777431 . + . ID=Thaps14384;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4J2];external_name=Thaps14384;logic_name=jgi_thaps3 chr6 ensembl transcript 1776070 1777431 . + . ID=Thaps14384;Parent=Thaps14384;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1776070 1776546 . + 0 ID=Thaps14384;Parent=Thaps14384;rank=1 chr6 . exon 1776070 1776546 . + . ID=Thaps14384.1;Parent=Thaps14384;constitutive=1;rank=1 chr6 . CDS 1776649 1777431 . + 0 ID=Thaps14384;Parent=Thaps14384;rank=2 chr6 . exon 1776649 1777431 . + . ID=Thaps14384.2;Parent=Thaps14384;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1773167 1773712 . - . ID=Thaps34878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4J1];external_name=Thaps34878;logic_name=jgi_thaps3 chr6 ensembl transcript 1773167 1773712 . - . ID=Thaps34878;Parent=Thaps34878;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1773167 1773712 . - 0 ID=Thaps34878;Parent=Thaps34878;rank=1 chr6 . exon 1773167 1773712 . - . ID=Thaps34878.1;Parent=Thaps34878;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1778858 1779755 . - . ID=Thaps35206;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4J3];external_name=Thaps35206;logic_name=jgi_thaps3 chr6 ensembl transcript 1778858 1779755 . - . ID=Thaps35206;Parent=Thaps35206;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1778858 1779586 . - 0 ID=Thaps35206;Parent=Thaps35206;rank=2 chr6 . exon 1778858 1779586 . - . ID=Thaps35206.2;Parent=Thaps35206;constitutive=1;rank=2 chr6 . CDS 1779663 1779755 . - 0 ID=Thaps35206;Parent=Thaps35206;rank=1 chr6 . exon 1779663 1779755 . - . ID=Thaps35206.1;Parent=Thaps35206;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1782525 1783586 . + . ID=Thaps6517;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4J4];external_name=Thaps6517;logic_name=jgi_thaps3 chr6 ensembl transcript 1782525 1783586 . + . ID=Thaps6517;Parent=Thaps6517;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1782525 1783586 . + 0 ID=Thaps6517;Parent=Thaps6517;rank=1 chr6 . exon 1782525 1783586 . + . ID=Thaps6517.1;Parent=Thaps6517;constitutive=1;rank=1 chr6 . repeat_region 1789558 1789565 . ? . description=dust chr6 . repeat_region 1790611 1790618 . ? . description=dust chr6 . repeat_region 1790644 1790666 . ? . description=trf chr6 . repeat_region 1790644 1790666 . ? . description=dust chr6 ensembl protein_coding_gene 1788596 1789021 . - . ID=Thaps19126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4J7];external_name=Thaps19126;logic_name=jgi_thaps3 chr6 ensembl transcript 1788596 1789021 . - . ID=Thaps19126;Parent=Thaps19126;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1788596 1788646 . - 0 ID=Thaps19126;Parent=Thaps19126;rank=2 chr6 . exon 1788596 1788646 . - . ID=Thaps19126.2;Parent=Thaps19126;constitutive=1;rank=2 chr6 . CDS 1788764 1789021 . - 0 ID=Thaps19126;Parent=Thaps19126;rank=1 chr6 . exon 1788764 1789021 . - . ID=Thaps19126.1;Parent=Thaps19126;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1783627 1784763 . - . ID=Thaps23288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4J5];external_name=Thaps23288;logic_name=jgi_thaps3 chr6 ensembl transcript 1783627 1784763 . - . ID=Thaps23288;Parent=Thaps23288;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1783627 1784286 . - 0 ID=Thaps23288;Parent=Thaps23288;rank=3 chr6 . exon 1783627 1784286 . - . ID=Thaps23288.3;Parent=Thaps23288;constitutive=1;rank=3 chr6 . CDS 1784387 1784517 . - 0 ID=Thaps23288;Parent=Thaps23288;rank=2 chr6 . exon 1784387 1784517 . - . ID=Thaps23288.2;Parent=Thaps23288;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1784625 1784763 . - 0 ID=Thaps23288;Parent=Thaps23288;rank=1 chr6 . exon 1784625 1784763 . - . ID=Thaps23288.1;Parent=Thaps23288;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1789703 1790914 . - . ID=Thaps23290;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4J8];external_name=Thaps23290;logic_name=jgi_thaps3 chr6 ensembl transcript 1789703 1790914 . - . ID=Thaps23290;Parent=Thaps23290;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1789703 1790914 . - 0 ID=Thaps23290;Parent=Thaps23290;rank=1 chr6 . exon 1789703 1790914 . - . ID=Thaps23290.1;Parent=Thaps23290;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1785148 1786605 . + . ID=Thaps6519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4J6];external_name=Thaps6519;logic_name=jgi_thaps3 chr6 ensembl transcript 1785148 1786605 . + . ID=Thaps6519;Parent=Thaps6519;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1785148 1786605 . + 0 ID=Thaps6519;Parent=Thaps6519;rank=1 chr6 . exon 1785148 1786605 . + . ID=Thaps6519.1;Parent=Thaps6519;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1791203 1791541 . + . ID=Thaps6522;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4J9];external_name=Thaps6522;logic_name=jgi_thaps3 chr6 ensembl transcript 1791203 1791541 . + . ID=Thaps6522;Parent=Thaps6522;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1791203 1791541 . + 0 ID=Thaps6522;Parent=Thaps6522;rank=1 chr6 . exon 1791203 1791541 . + . ID=Thaps6522.1;Parent=Thaps6522;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1792034 1792726 . - . ID=Thaps6523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4K0];external_name=Thaps6523;logic_name=jgi_thaps3 chr6 ensembl transcript 1792034 1792726 . - . ID=Thaps6523;Parent=Thaps6523;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1792034 1792726 . - 0 ID=Thaps6523;Parent=Thaps6523;rank=1 chr6 . exon 1792034 1792726 . - . ID=Thaps6523.1;Parent=Thaps6523;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1796376 1797796 . + . ID=Thaps23292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4K3];external_name=Thaps23292;logic_name=jgi_thaps3 chr6 ensembl transcript 1796376 1797796 . + . ID=Thaps23292;Parent=Thaps23292;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1796376 1796774 . + 0 ID=Thaps23292;Parent=Thaps23292;rank=1 chr6 . exon 1796376 1796774 . + . ID=Thaps23292.1;Parent=Thaps23292;constitutive=1;rank=1 chr6 . CDS 1796867 1797796 . + 0 ID=Thaps23292;Parent=Thaps23292;rank=2 chr6 . exon 1796867 1797796 . + . ID=Thaps23292.2;Parent=Thaps23292;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1793189 1793538 . + . ID=Thaps41211;biotype=protein_coding;description=50S ribosomal protein L33 [Source:UniProtKB/TrEMBL%3BAcc:B8C4K1];external_name=Thaps41211;logic_name=jgi_thaps3 chr6 ensembl transcript 1793189 1793538 . + . ID=Thaps41211;Parent=Thaps41211;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1793189 1793248 . + 0 ID=Thaps41211;Parent=Thaps41211;rank=1 chr6 . exon 1793189 1793248 . + . ID=Thaps41211.1;Parent=Thaps41211;constitutive=1;rank=1 chr6 . CDS 1793401 1793538 . + 0 ID=Thaps41211;Parent=Thaps41211;rank=2 chr6 . exon 1793401 1793538 . + . ID=Thaps41211.2;Parent=Thaps41211;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 1801714 1802862 . + . ID=Thaps41216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4K4];external_name=Thaps41216;logic_name=jgi_thaps3 chr6 ensembl transcript 1801714 1802862 . + . ID=Thaps41216;Parent=Thaps41216;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1801714 1802173 . + 0 ID=Thaps41216;Parent=Thaps41216;rank=1 chr6 . exon 1801714 1802173 . + . ID=Thaps41216.1;Parent=Thaps41216;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1802291 1802862 . + 0 ID=Thaps41216;Parent=Thaps41216;rank=2 chr6 . exon 1802291 1802862 . + . ID=Thaps41216.2;Parent=Thaps41216;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1793806 1795708 . - . ID=Thaps6524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4K2];external_name=Thaps6524;logic_name=jgi_thaps3 chr6 ensembl transcript 1793806 1795708 . - . ID=Thaps6524;Parent=Thaps6524;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1793806 1794152 . - 0 ID=Thaps6524;Parent=Thaps6524;rank=2 chr6 . exon 1793806 1794152 . - . ID=Thaps6524.2;Parent=Thaps6524;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1794235 1795708 . - 0 ID=Thaps6524;Parent=Thaps6524;rank=1 chr6 . exon 1794235 1795708 . - . ID=Thaps6524.1;Parent=Thaps6524;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 1807195 1807264 . ? . description=trf chr6 . repeat_region 1809328 1809336 . ? . description=dust chr6 . repeat_region 1809763 1809807 . ? . description=trf chr6 ensembl protein_coding_gene 1810124 1811756 . + . ID=Thaps23295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4K8];external_name=Thaps23295;logic_name=jgi_thaps3 chr6 ensembl transcript 1810124 1811756 . + . ID=Thaps23295;Parent=Thaps23295;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1810124 1810583 . + 0 ID=Thaps23295;Parent=Thaps23295;rank=1 chr6 . exon 1810124 1810583 . + . ID=Thaps23295.1;Parent=Thaps23295;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1810663 1811756 . + 0 ID=Thaps23295;Parent=Thaps23295;rank=2 chr6 . exon 1810663 1811756 . + . ID=Thaps23295.2;Parent=Thaps23295;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1804050 1805094 . - . ID=Thaps34592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4K5];external_name=Thaps34592;logic_name=jgi_thaps3 chr6 ensembl transcript 1804050 1805094 . - . ID=Thaps34592;Parent=Thaps34592;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1804050 1804330 . - 0 ID=Thaps34592;Parent=Thaps34592;rank=2 chr6 . exon 1804050 1804330 . - . ID=Thaps34592.2;Parent=Thaps34592;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1804491 1805094 . - 0 ID=Thaps34592;Parent=Thaps34592;rank=1 chr6 . exon 1804491 1805094 . - . ID=Thaps34592.1;Parent=Thaps34592;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1805967 1806977 . - . ID=Thaps6528;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4K6];external_name=Thaps6528;logic_name=jgi_thaps3 chr6 ensembl transcript 1805967 1806977 . - . ID=Thaps6528;Parent=Thaps6528;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1805967 1806977 . - 0 ID=Thaps6528;Parent=Thaps6528;rank=1 chr6 . exon 1805967 1806977 . - . ID=Thaps6528.1;Parent=Thaps6528;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1807489 1808136 . + . ID=Thaps6529;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4K7];external_name=Thaps6529;logic_name=jgi_thaps3 chr6 ensembl transcript 1807489 1808136 . + . ID=Thaps6529;Parent=Thaps6529;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1807489 1808136 . + 0 ID=Thaps6529;Parent=Thaps6529;rank=1 chr6 . exon 1807489 1808136 . + . ID=Thaps6529.1;Parent=Thaps6529;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1811854 1813620 . - . ID=Thaps6531;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4K9];external_name=Thaps6531;logic_name=jgi_thaps3 chr6 ensembl transcript 1811854 1813620 . - . ID=Thaps6531;Parent=Thaps6531;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1811854 1813620 . - 0 ID=Thaps6531;Parent=Thaps6531;rank=1 chr6 . exon 1811854 1813620 . - . ID=Thaps6531.1;Parent=Thaps6531;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1814369 1815147 . - . ID=Thaps34702;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L0];external_name=Thaps34702;logic_name=jgi_thaps3 chr6 ensembl transcript 1814369 1815147 . - . ID=Thaps34702;Parent=Thaps34702;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1814369 1814479 . - 0 ID=Thaps34702;Parent=Thaps34702;rank=4 chr6 . exon 1814369 1814479 . - . ID=Thaps34702.4;Parent=Thaps34702;constitutive=1;rank=4 chr6 . CDS 1814567 1814639 . - 0 ID=Thaps34702;Parent=Thaps34702;rank=3 chr6 . exon 1814567 1814639 . - . ID=Thaps34702.3;Parent=Thaps34702;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1814736 1814817 . - 0 ID=Thaps34702;Parent=Thaps34702;rank=2 chr6 . exon 1814736 1814817 . - . ID=Thaps34702.2;Parent=Thaps34702;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1814964 1815147 . - 0 ID=Thaps34702;Parent=Thaps34702;rank=1 chr6 . exon 1814964 1815147 . - . ID=Thaps34702.1;Parent=Thaps34702;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1815431 1816396 . + . ID=Thaps6532;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L1];external_name=Thaps6532;logic_name=jgi_thaps3 chr6 ensembl transcript 1815431 1816396 . + . ID=Thaps6532;Parent=Thaps6532;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1815431 1816396 . + 0 ID=Thaps6532;Parent=Thaps6532;rank=1 chr6 . exon 1815431 1816396 . + . ID=Thaps6532.1;Parent=Thaps6532;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1816612 1818992 . + . ID=Thaps6533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L2];external_name=Thaps6533;logic_name=jgi_thaps3 chr6 ensembl transcript 1816612 1818992 . + . ID=Thaps6533;Parent=Thaps6533;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1816612 1816738 . + 0 ID=Thaps6533;Parent=Thaps6533;rank=1 chr6 . exon 1816612 1816738 . + . ID=Thaps6533.1;Parent=Thaps6533;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1816988 1818236 . + 0 ID=Thaps6533;Parent=Thaps6533;rank=2 chr6 . exon 1816988 1818236 . + . ID=Thaps6533.2;Parent=Thaps6533;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1818315 1818435 . + 0 ID=Thaps6533;Parent=Thaps6533;rank=3 chr6 . exon 1818315 1818435 . + . ID=Thaps6533.3;Parent=Thaps6533;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1818504 1818992 . + 0 ID=Thaps6533;Parent=Thaps6533;rank=4 chr6 . exon 1818504 1818992 . + . ID=Thaps6533.4;Parent=Thaps6533;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 1819242 1820005 . - . ID=Thaps6534;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L3];external_name=Thaps6534;logic_name=jgi_thaps3 chr6 ensembl transcript 1819242 1820005 . - . ID=Thaps6534;Parent=Thaps6534;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1819242 1819688 . - 0 ID=Thaps6534;Parent=Thaps6534;rank=2 chr6 . exon 1819242 1819688 . - . ID=Thaps6534.2;Parent=Thaps6534;constitutive=1;rank=2 chr6 . CDS 1819790 1820005 . - 0 ID=Thaps6534;Parent=Thaps6534;rank=1 chr6 . exon 1819790 1820005 . - . ID=Thaps6534.1;Parent=Thaps6534;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1820720 1822108 . - . ID=Thaps6535;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L4];external_name=Thaps6535;logic_name=jgi_thaps3 chr6 ensembl transcript 1820720 1822108 . - . ID=Thaps6535;Parent=Thaps6535;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1820720 1822108 . - 0 ID=Thaps6535;Parent=Thaps6535;rank=1 chr6 . exon 1820720 1822108 . - . ID=Thaps6535.1;Parent=Thaps6535;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1822488 1824857 . + . ID=Thaps6536;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L5];external_name=Thaps6536;logic_name=jgi_thaps3 chr6 ensembl transcript 1822488 1824857 . + . ID=Thaps6536;Parent=Thaps6536;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1822488 1824857 . + 0 ID=Thaps6536;Parent=Thaps6536;rank=1 chr6 . exon 1822488 1824857 . + . ID=Thaps6536.1;Parent=Thaps6536;constitutive=1;rank=1 chr6 . repeat_region 1827443 1827452 . ? . description=dust chr6 ensembl protein_coding_gene 1827668 1830813 . - . ID=Thaps23296;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L7];external_name=Thaps23296;logic_name=jgi_thaps3 chr6 ensembl transcript 1827668 1830813 . - . ID=Thaps23296;Parent=Thaps23296;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1827668 1827736 . - 0 ID=Thaps23296;Parent=Thaps23296;rank=4 chr6 . exon 1827668 1827736 . - . ID=Thaps23296.4;Parent=Thaps23296;constitutive=1;rank=4 chr6 . CDS 1827827 1828650 . - 0 ID=Thaps23296;Parent=Thaps23296;rank=3 chr6 . exon 1827827 1828650 . - . ID=Thaps23296.3;Parent=Thaps23296;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1828745 1830141 . - 0 ID=Thaps23296;Parent=Thaps23296;rank=2 chr6 . exon 1828745 1830141 . - . ID=Thaps23296.2;Parent=Thaps23296;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1830251 1830813 . - 0 ID=Thaps23296;Parent=Thaps23296;rank=1 chr6 . exon 1830251 1830813 . - . ID=Thaps23296.1;Parent=Thaps23296;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1825031 1827146 . - . ID=Thaps6537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L6];external_name=Thaps6537;logic_name=jgi_thaps3 chr6 ensembl transcript 1825031 1827146 . - . ID=Thaps6537;Parent=Thaps6537;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1825031 1825082 . - 0 ID=Thaps6537;Parent=Thaps6537;rank=3 chr6 . exon 1825031 1825082 . - . ID=Thaps6537.3;Parent=Thaps6537;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1825189 1826158 . - 0 ID=Thaps6537;Parent=Thaps6537;rank=2 chr6 . exon 1825189 1826158 . - . ID=Thaps6537.2;Parent=Thaps6537;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1826453 1827146 . - 0 ID=Thaps6537;Parent=Thaps6537;rank=1 chr6 . exon 1826453 1827146 . - . ID=Thaps6537.1;Parent=Thaps6537;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1831193 1832374 . + . ID=Thaps6539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L8];external_name=Thaps6539;logic_name=jgi_thaps3 chr6 ensembl transcript 1831193 1832374 . + . ID=Thaps6539;Parent=Thaps6539;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1831193 1831498 . + 0 ID=Thaps6539;Parent=Thaps6539;rank=1 chr6 . exon 1831193 1831498 . + . ID=Thaps6539.1;Parent=Thaps6539;constitutive=1;rank=1 chr6 . CDS 1831598 1832374 . + 0 ID=Thaps6539;Parent=Thaps6539;rank=2 chr6 . exon 1831598 1832374 . + . ID=Thaps6539.2;Parent=Thaps6539;constitutive=1;rank=2 chr6 . repeat_region 1835736 1835951 . ? . description=trf chr6 . repeat_region 1836811 1836840 . ? . description=trf chr6 ensembl protein_coding_gene 1841145 1845736 . + . ID=Thaps28816;biotype=protein_coding;description=DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8C4M1];external_name=RPC1;logic_name=jgi_thaps3 chr6 ensembl transcript 1841145 1845736 . + . ID=Thaps28816;Parent=Thaps28816;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1841145 1843382 . + 0 ID=Thaps28816;Parent=Thaps28816;rank=1 chr6 . exon 1841145 1843382 . + . ID=Thaps28816.1;Parent=Thaps28816;constitutive=1;rank=1 chr6 . CDS 1843466 1843927 . + 0 ID=Thaps28816;Parent=Thaps28816;rank=2 chr6 . CDS 1844020 1844541 . + 0 ID=Thaps28816;Parent=Thaps28816;rank=3 chr6 . CDS 1844620 1844683 . + 0 ID=Thaps28816;Parent=Thaps28816;rank=4 chr6 . CDS 1844754 1845736 . + 0 ID=Thaps28816;Parent=Thaps28816;rank=5 chr6 ensembl protein_coding_gene 1837031 1839924 . + . ID=Thaps6541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4L9];external_name=Thaps6541;logic_name=jgi_thaps3 chr6 ensembl transcript 1837031 1839924 . + . ID=Thaps6541;Parent=Thaps6541;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1837031 1837524 . + 0 ID=Thaps6541;Parent=Thaps6541;rank=1 chr6 . exon 1837031 1837524 . + . ID=Thaps6541.1;Parent=Thaps6541;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1837616 1838872 . + 0 ID=Thaps6541;Parent=Thaps6541;rank=2 chr6 . exon 1837616 1838872 . + . ID=Thaps6541.2;Parent=Thaps6541;constitutive=1;rank=2 chr6 . CDS 1838942 1839827 . + 0 ID=Thaps6541;Parent=Thaps6541;rank=3 chr6 . exon 1838942 1839827 . + . ID=Thaps6541.3;Parent=Thaps6541;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1839886 1839924 . + 0 ID=Thaps6541;Parent=Thaps6541;rank=4 chr6 . exon 1839886 1839924 . + . ID=Thaps6541.4;Parent=Thaps6541;constitutive=1;rank=4 chr6 ensembl protein_coding_gene 1840315 1840821 . - . ID=Thaps6542;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4M0];external_name=Thaps6542;logic_name=jgi_thaps3 chr6 ensembl transcript 1840315 1840821 . - . ID=Thaps6542;Parent=Thaps6542;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1840315 1840821 . - 0 ID=Thaps6542;Parent=Thaps6542;rank=1 chr6 . exon 1840315 1840821 . - . ID=Thaps6542.1;Parent=Thaps6542;constitutive=1;rank=1 chr6 . repeat_region 1845947 1846004 . ? . description=dust chr6 . repeat_region 1846787 1846795 . ? . description=dust chr6 . repeat_region 1849718 1849725 . ? . description=dust chr6 . repeat_region 1851860 1851867 . ? . description=dust chr6 . repeat_region 1852064 1852089 . ? . description=dust chr6 ensembl protein_coding_gene 1845879 1846544 . - . ID=Thaps23300;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4M2];external_name=Thaps23300;logic_name=jgi_thaps3 chr6 ensembl transcript 1845879 1846544 . - . ID=Thaps23300;Parent=Thaps23300;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1845879 1846544 . - 0 ID=Thaps23300;Parent=Thaps23300;rank=1 chr6 . exon 1845879 1846544 . - . ID=Thaps23300.1;Parent=Thaps23300;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1847228 1852810 . - . ID=Thaps23301;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4M3];external_name=Thaps23301;logic_name=jgi_thaps3 chr6 ensembl transcript 1847228 1852810 . - . ID=Thaps23301;Parent=Thaps23301;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1847228 1848073 . - 0 ID=Thaps23301;Parent=Thaps23301;rank=6 chr6 . exon 1847228 1848073 . - . ID=Thaps23301.6;Parent=Thaps23301;constitutive=1;rank=6 chr6 . CDS 1848163 1848266 . - 0 ID=Thaps23301;Parent=Thaps23301;rank=5 chr6 . exon 1848163 1848266 . - . ID=Thaps23301.5;Parent=Thaps23301;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1848355 1849244 . - 0 ID=Thaps23301;Parent=Thaps23301;rank=4 chr6 . exon 1848355 1849244 . - . ID=Thaps23301.4;Parent=Thaps23301;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1849333 1851803 . - 0 ID=Thaps23301;Parent=Thaps23301;rank=3 chr6 . exon 1849333 1851803 . - . ID=Thaps23301.3;Parent=Thaps23301;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1852094 1852637 . - 0 ID=Thaps23301;Parent=Thaps23301;rank=2 chr6 . exon 1852094 1852637 . - . ID=Thaps23301.2;Parent=Thaps23301;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1852755 1852810 . - 0 ID=Thaps23301;Parent=Thaps23301;rank=1 chr6 . exon 1843466 1843927 . + . ID=Thaps28816.2;Parent=Thaps28816;constitutive=1;rank=2 chr6 . exon 1844020 1844541 . + . ID=Thaps28816.3;Parent=Thaps28816;constitutive=1;rank=3 chr6 . exon 1844620 1844683 . + . ID=Thaps28816.4;Parent=Thaps28816;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . exon 1844754 1845736 . + . ID=Thaps28816.5;Parent=Thaps28816;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . exon 1852755 1852810 . - . ID=Thaps23301.1;Parent=Thaps23301;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1859488 1861058 . - . ID=Thaps23303;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4M6];external_name=Thaps23303;logic_name=jgi_thaps3 chr6 ensembl transcript 1859488 1861058 . - . ID=Thaps23303;Parent=Thaps23303;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1859488 1860236 . - 0 ID=Thaps23303;Parent=Thaps23303;rank=2 chr6 . exon 1859488 1860236 . - . ID=Thaps23303.2;Parent=Thaps23303;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1860365 1861058 . - 0 ID=Thaps23303;Parent=Thaps23303;rank=1 chr6 . exon 1860365 1861058 . - . ID=Thaps23303.1;Parent=Thaps23303;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1861873 1862832 . + . ID=Thaps23304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4M7];external_name=Thaps23304;logic_name=jgi_thaps3 chr6 ensembl transcript 1861873 1862832 . + . ID=Thaps23304;Parent=Thaps23304;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1861873 1862832 . + 0 ID=Thaps23304;Parent=Thaps23304;rank=1 chr6 . exon 1861873 1862832 . + . ID=Thaps23304.1;Parent=Thaps23304;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1856359 1859343 . + . ID=Thaps269183;biotype=protein_coding;description=Membrane transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C4M5];external_name=Thaps269183;logic_name=jgi_thaps3 chr6 ensembl transcript 1856359 1859343 . + . ID=Thaps269183;Parent=Thaps269183;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1856359 1856610 . + 0 ID=Thaps269183;Parent=Thaps269183;rank=1 chr6 . exon 1856359 1856610 . + . ID=Thaps269183.1;Parent=Thaps269183;constitutive=1;rank=1 chr6 . CDS 1856683 1857345 . + 0 ID=Thaps269183;Parent=Thaps269183;rank=2 chr6 . exon 1856683 1857345 . + . ID=Thaps269183.2;Parent=Thaps269183;constitutive=1;rank=2 chr6 . CDS 1857437 1857591 . + 0 ID=Thaps269183;Parent=Thaps269183;rank=3 chr6 . exon 1857437 1857591 . + . ID=Thaps269183.3;Parent=Thaps269183;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1857879 1858103 . + 0 ID=Thaps269183;Parent=Thaps269183;rank=4 chr6 . exon 1857879 1858103 . + . ID=Thaps269183.4;Parent=Thaps269183;constitutive=1;rank=4 chr6 . CDS 1858251 1858668 . + 0 ID=Thaps269183;Parent=Thaps269183;rank=5 chr6 . exon 1858251 1858668 . + . ID=Thaps269183.5;Parent=Thaps269183;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 1858738 1858990 . + 0 ID=Thaps269183;Parent=Thaps269183;rank=6 chr6 . exon 1858738 1858990 . + . ID=Thaps269183.6;Parent=Thaps269183;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . CDS 1859102 1859343 . + 0 ID=Thaps269183;Parent=Thaps269183;rank=7 chr6 . exon 1859102 1859343 . + . ID=Thaps269183.7;Parent=Thaps269183;constitutive=1;ensembl_end_phase=2;rank=7 chr6 ensembl protein_coding_gene 1853388 1855436 . - . ID=Thaps6547;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4M4];external_name=Thaps6547;logic_name=jgi_thaps3 chr6 ensembl transcript 1853388 1855436 . - . ID=Thaps6547;Parent=Thaps6547;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1853388 1855436 . - 0 ID=Thaps6547;Parent=Thaps6547;rank=1 chr6 . exon 1853388 1855436 . - . ID=Thaps6547.1;Parent=Thaps6547;constitutive=1;rank=1 chr6 . repeat_region 1867151 1867170 . ? . description=trf chr6 ensembl protein_coding_gene 1870441 1871848 . + . ID=Thaps35133;biotype=protein_coding;description=SIT3%2C silicic acid transporter-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N0];external_name=SIT;logic_name=jgi_thaps3 chr6 ensembl transcript 1870441 1871848 . + . ID=Thaps35133;Parent=Thaps35133;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1870441 1870730 . + 0 ID=Thaps35133;Parent=Thaps35133;rank=1 chr6 . exon 1870441 1870730 . + . ID=Thaps35133.1;Parent=Thaps35133;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1870828 1871848 . + 0 ID=Thaps35133;Parent=Thaps35133;rank=2 chr6 . exon 1870828 1871848 . + . ID=Thaps35133.2;Parent=Thaps35133;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1863186 1863965 . - . ID=Thaps6551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4M8];external_name=Thaps6551;logic_name=jgi_thaps3 chr6 ensembl transcript 1863186 1863965 . - . ID=Thaps6551;Parent=Thaps6551;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1863186 1863965 . - 0 ID=Thaps6551;Parent=Thaps6551;rank=1 chr6 . exon 1863186 1863965 . - . ID=Thaps6551.1;Parent=Thaps6551;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1864541 1867153 . - . ID=Thaps6552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4M9];external_name=Thaps6552;logic_name=jgi_thaps3 chr6 ensembl transcript 1864541 1867153 . - . ID=Thaps6552;Parent=Thaps6552;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1864541 1867153 . - 0 ID=Thaps6552;Parent=Thaps6552;rank=1 chr6 . exon 1864541 1867153 . - . ID=Thaps6552.1;Parent=Thaps6552;constitutive=1;rank=1 chr6 . repeat_region 1879499 1879531 . ? . description=dust chr6 ensembl protein_coding_gene 1876724 1878406 . + . ID=Thaps23306;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N1];external_name=Thaps23306;logic_name=jgi_thaps3 chr6 ensembl transcript 1876724 1878406 . + . ID=Thaps23306;Parent=Thaps23306;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1876724 1878406 . + 0 ID=Thaps23306;Parent=Thaps23306;rank=1 chr6 . exon 1876724 1878406 . + . ID=Thaps23306.1;Parent=Thaps23306;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1881946 1882696 . + . ID=Thaps35207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N3];external_name=Thaps35207;logic_name=jgi_thaps3 chr6 ensembl transcript 1881946 1882696 . + . ID=Thaps35207;Parent=Thaps35207;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1881946 1882125 . + 0 ID=Thaps35207;Parent=Thaps35207;rank=1 chr6 . exon 1881946 1882125 . + . ID=Thaps35207.1;Parent=Thaps35207;constitutive=1;rank=1 chr6 . CDS 1882219 1882330 . + 0 ID=Thaps35207;Parent=Thaps35207;rank=2 chr6 . exon 1882219 1882330 . + . ID=Thaps35207.2;Parent=Thaps35207;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1882464 1882696 . + 0 ID=Thaps35207;Parent=Thaps35207;rank=3 chr6 ensembl protein_coding_gene 1879309 1880511 . - . ID=Thaps6555;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N2];external_name=Thaps6555;logic_name=jgi_thaps3 chr6 ensembl transcript 1879309 1880511 . - . ID=Thaps6555;Parent=Thaps6555;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1879309 1879497 . - 0 ID=Thaps6555;Parent=Thaps6555;rank=3 chr6 . exon 1879309 1879497 . - . ID=Thaps6555.3;Parent=Thaps6555;constitutive=1;rank=3 chr6 . CDS 1879669 1880017 . - 0 ID=Thaps6555;Parent=Thaps6555;rank=2 chr6 . exon 1879669 1880017 . - . ID=Thaps6555.2;Parent=Thaps6555;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1880339 1880511 . - 0 ID=Thaps6555;Parent=Thaps6555;rank=1 chr6 . exon 1880339 1880511 . - . ID=Thaps6555.1;Parent=Thaps6555;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 1888315 1888349 . ? . description=trf chr6 . repeat_region 1888315 1888349 . ? . description=trf chr6 . repeat_region 1889098 1889117 . ? . description=trf chr6 ensembl protein_coding_gene 1884026 1884511 . + . ID=Thaps19465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N4];external_name=Thaps19465;logic_name=jgi_thaps3 chr6 ensembl transcript 1884026 1884511 . + . ID=Thaps19465;Parent=Thaps19465;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1884026 1884057 . + 0 ID=Thaps19465;Parent=Thaps19465;rank=1 chr6 . exon 1884026 1884057 . + . ID=Thaps19465.1;Parent=Thaps19465;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1884220 1884511 . + 0 ID=Thaps19465;Parent=Thaps19465;rank=2 chr6 . exon 1884220 1884511 . + . ID=Thaps19465.2;Parent=Thaps19465;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1889226 1889951 . + . ID=Thaps23308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N6];external_name=Thaps23308;logic_name=jgi_thaps3 chr6 ensembl transcript 1889226 1889951 . + . ID=Thaps23308;Parent=Thaps23308;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1889226 1889951 . + 0 ID=Thaps23308;Parent=Thaps23308;rank=1 chr6 . exon 1889226 1889951 . + . ID=Thaps23308.1;Parent=Thaps23308;constitutive=1;rank=1 chr6 . exon 1882464 1882696 . + . ID=Thaps35207.3;Parent=Thaps35207;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 1885338 1888615 . - . ID=Thaps6558;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N5];external_name=Thaps6558;logic_name=jgi_thaps3 chr6 ensembl transcript 1885338 1888615 . - . ID=Thaps6558;Parent=Thaps6558;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1885338 1886195 . - 0 ID=Thaps6558;Parent=Thaps6558;rank=3 chr6 . exon 1885338 1886195 . - . ID=Thaps6558.3;Parent=Thaps6558;constitutive=1;rank=3 chr6 . CDS 1886270 1888026 . - 0 ID=Thaps6558;Parent=Thaps6558;rank=2 chr6 . exon 1886270 1888026 . - . ID=Thaps6558.2;Parent=Thaps6558;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1888390 1888615 . - 0 ID=Thaps6558;Parent=Thaps6558;rank=1 chr6 . exon 1888390 1888615 . - . ID=Thaps6558.1;Parent=Thaps6558;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1890897 1895929 . - . ID=Thaps6560;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N7];external_name=Thaps6560;logic_name=jgi_thaps3 chr6 ensembl transcript 1890897 1895929 . - . ID=Thaps6560;Parent=Thaps6560;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1890897 1891625 . - 0 ID=Thaps6560;Parent=Thaps6560;rank=6 chr6 . exon 1890897 1891625 . - . ID=Thaps6560.6;Parent=Thaps6560;constitutive=1;rank=6 chr6 . CDS 1891708 1892888 . - 0 ID=Thaps6560;Parent=Thaps6560;rank=5 chr6 . exon 1891708 1892888 . - . ID=Thaps6560.5;Parent=Thaps6560;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1892922 1893153 . - 0 ID=Thaps6560;Parent=Thaps6560;rank=4 chr6 . CDS 1893238 1893573 . - 0 ID=Thaps6560;Parent=Thaps6560;rank=3 chr6 . CDS 1893656 1894139 . - 0 ID=Thaps6560;Parent=Thaps6560;rank=2 chr6 . CDS 1894182 1895929 . - 0 ID=Thaps6560;Parent=Thaps6560;rank=1 chr6 . repeat_region 1897461 1897481 . ? . description=dust chr6 . repeat_region 1899215 1899228 . ? . description=dust chr6 ensembl protein_coding_gene 1899635 1901596 . - . ID=Thaps13149;biotype=protein_coding;description=Outer dynein arm intermediate chain subunit-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P0];external_name=DIC2;logic_name=jgi_thaps3 chr6 ensembl transcript 1899635 1901596 . - . ID=Thaps13149;Parent=Thaps13149;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1899635 1899922 . - 0 ID=Thaps13149;Parent=Thaps13149;rank=2 chr6 . exon 1899635 1899922 . - . ID=Thaps13149.2;Parent=Thaps13149;constitutive=1;rank=2 chr6 . CDS 1900031 1901596 . - 0 ID=Thaps13149;Parent=Thaps13149;rank=1 chr6 . exon 1900031 1901596 . - . ID=Thaps13149.1;Parent=Thaps13149;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1896451 1898139 . - . ID=Thaps23309;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N8];external_name=Thaps23309;logic_name=jgi_thaps3 chr6 ensembl transcript 1896451 1898139 . - . ID=Thaps23309;Parent=Thaps23309;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1896451 1898139 . - 0 ID=Thaps23309;Parent=Thaps23309;rank=1 chr6 . exon 1896451 1898139 . - . ID=Thaps23309.1;Parent=Thaps23309;constitutive=1;rank=1 chr6 . exon 1892922 1893153 . - . ID=Thaps6560.4;Parent=Thaps6560;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . exon 1893238 1893573 . - . ID=Thaps6560.3;Parent=Thaps6560;constitutive=1;rank=3 chr6 . exon 1893656 1894139 . - . ID=Thaps6560.2;Parent=Thaps6560;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . exon 1894182 1895929 . - . ID=Thaps6560.1;Parent=Thaps6560;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1898783 1899196 . + . ID=Thaps6562;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4N9];external_name=Thaps6562;logic_name=jgi_thaps3 chr6 ensembl transcript 1898783 1899196 . + . ID=Thaps6562;Parent=Thaps6562;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1898783 1899196 . + 0 ID=Thaps6562;Parent=Thaps6562;rank=1 chr6 . exon 1898783 1899196 . + . ID=Thaps6562.1;Parent=Thaps6562;constitutive=1;rank=1 chr6 . repeat_region 1911532 1911573 . ? . description=trf chr6 ensembl tRNA_gene 1904700 1904781 . - . ID=EPrTPOG00000000053;biotype=tRNA;description=tRNA-Ser for anticodon GCU [Source:TRNASCAN_SE%3BAcc:tRNA-Ser];external_name=tRNA-Ser;logic_name=ncrna_eg chr6 ensembl transcript 1904700 1904781 . - . ID=EPrTPOT00000000053;Parent=EPrTPOG00000000053;biotype=tRNA;logic_name=ncrna_eg chr6 . exon 1904700 1904781 . - . ID=EPrTPOE00000000053;Parent=EPrTPOT00000000053;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1905306 1906025 . + . ID=Thaps23310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P2];external_name=Thaps23310;logic_name=jgi_thaps3 chr6 ensembl transcript 1905306 1906025 . + . ID=Thaps23310;Parent=Thaps23310;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1905306 1906025 . + 0 ID=Thaps23310;Parent=Thaps23310;rank=1 chr6 . exon 1905306 1906025 . + . ID=Thaps23310.1;Parent=Thaps23310;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1906451 1909983 . + . ID=Thaps23311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P3];external_name=Thaps23311;logic_name=jgi_thaps3 chr6 ensembl transcript 1906451 1909983 . + . ID=Thaps23311;Parent=Thaps23311;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1906451 1906737 . + 0 ID=Thaps23311;Parent=Thaps23311;rank=1 chr6 . exon 1906451 1906737 . + . ID=Thaps23311.1;Parent=Thaps23311;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 1907004 1909983 . + 0 ID=Thaps23311;Parent=Thaps23311;rank=2 chr6 . exon 1907004 1909983 . + . ID=Thaps23311.2;Parent=Thaps23311;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 1903244 1904206 . + . ID=Thaps6564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P1];external_name=Thaps6564;logic_name=jgi_thaps3 chr6 ensembl transcript 1903244 1904206 . + . ID=Thaps6564;Parent=Thaps6564;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1903244 1904206 . + 0 ID=Thaps6564;Parent=Thaps6564;rank=1 chr6 . exon 1903244 1904206 . + . ID=Thaps6564.1;Parent=Thaps6564;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1910055 1915677 . - . ID=Thaps6567;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P4];external_name=Thaps6567;logic_name=jgi_thaps3 chr6 ensembl transcript 1910055 1915677 . - . ID=Thaps6567;Parent=Thaps6567;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1910055 1910806 . - 0 ID=Thaps6567;Parent=Thaps6567;rank=4 chr6 . exon 1910055 1910806 . - . ID=Thaps6567.4;Parent=Thaps6567;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1911055 1912153 . - 0 ID=Thaps6567;Parent=Thaps6567;rank=3 chr6 . exon 1911055 1912153 . - . ID=Thaps6567.3;Parent=Thaps6567;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1912257 1915032 . - 0 ID=Thaps6567;Parent=Thaps6567;rank=2 chr6 . exon 1912257 1915032 . - . ID=Thaps6567.2;Parent=Thaps6567;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1915097 1915677 . - 0 ID=Thaps6567;Parent=Thaps6567;rank=1 chr6 . repeat_region 1918506 1918521 . ? . description=dust chr6 . repeat_region 1920201 1920227 . ? . description=dust chr6 ensembl protein_coding_gene 1917864 1919144 . - . ID=Thaps23313;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P6];external_name=Thaps23313;logic_name=jgi_thaps3 chr6 ensembl transcript 1917864 1919144 . - . ID=Thaps23313;Parent=Thaps23313;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1917864 1919144 . - 0 ID=Thaps23313;Parent=Thaps23313;rank=1 chr6 . exon 1917864 1919144 . - . ID=Thaps23313.1;Parent=Thaps23313;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1919718 1921138 . - . ID=Thaps23314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P7];external_name=Thaps23314;logic_name=jgi_thaps3 chr6 ensembl transcript 1919718 1921138 . - . ID=Thaps23314;Parent=Thaps23314;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1919718 1920407 . - 0 ID=Thaps23314;Parent=Thaps23314;rank=3 chr6 . exon 1919718 1920407 . - . ID=Thaps23314.3;Parent=Thaps23314;constitutive=1;rank=3 chr6 . CDS 1920577 1921047 . - 0 ID=Thaps23314;Parent=Thaps23314;rank=2 chr6 . exon 1920577 1921047 . - . ID=Thaps23314.2;Parent=Thaps23314;constitutive=1;rank=2 chr6 . CDS 1921100 1921138 . - 0 ID=Thaps23314;Parent=Thaps23314;rank=1 chr6 . exon 1921100 1921138 . - . ID=Thaps23314.1;Parent=Thaps23314;constitutive=1;rank=1 chr6 . exon 1915097 1915677 . - . ID=Thaps6567.1;Parent=Thaps6567;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1916318 1917700 . + . ID=Thaps6568;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P5];external_name=Thaps6568;logic_name=jgi_thaps3 chr6 ensembl transcript 1916318 1917700 . + . ID=Thaps6568;Parent=Thaps6568;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1916318 1917700 . + 0 ID=Thaps6568;Parent=Thaps6568;rank=1 chr6 . exon 1916318 1917700 . + . ID=Thaps6568.1;Parent=Thaps6568;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1921475 1922132 . - . ID=Thaps6571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P8];external_name=Thaps6571;logic_name=jgi_thaps3 chr6 ensembl transcript 1921475 1922132 . - . ID=Thaps6571;Parent=Thaps6571;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1921475 1921778 . - 0 ID=Thaps6571;Parent=Thaps6571;rank=2 chr6 . exon 1921475 1921778 . - . ID=Thaps6571.2;Parent=Thaps6571;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1922050 1922132 . - 0 ID=Thaps6571;Parent=Thaps6571;rank=1 chr6 . exon 1922050 1922132 . - . ID=Thaps6571.1;Parent=Thaps6571;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 1923135 1923176 . ? . description=trf chr6 . repeat_region 1928012 1928053 . ? . description=trf chr6 . repeat_region 1931818 1931843 . ? . description=trf chr6 ensembl protein_coding_gene 1923665 1925527 . + . ID=Thaps23315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q0];external_name=Thaps23315;logic_name=jgi_thaps3 chr6 ensembl transcript 1923665 1925527 . + . ID=Thaps23315;Parent=Thaps23315;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1923665 1925527 . + 0 ID=Thaps23315;Parent=Thaps23315;rank=1 chr6 . exon 1923665 1925527 . + . ID=Thaps23315.1;Parent=Thaps23315;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1925947 1927746 . + . ID=Thaps23316;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q1];external_name=Thaps23316;logic_name=jgi_thaps3 chr6 ensembl transcript 1925947 1927746 . + . ID=Thaps23316;Parent=Thaps23316;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1925947 1927746 . + 0 ID=Thaps23316;Parent=Thaps23316;rank=1 chr6 . exon 1925947 1927746 . + . ID=Thaps23316.1;Parent=Thaps23316;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1928356 1931160 . - . ID=Thaps28825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q2];external_name=Thaps28825;logic_name=jgi_thaps3 chr6 ensembl transcript 1928356 1931160 . - . ID=Thaps28825;Parent=Thaps28825;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1928356 1930270 . - 0 ID=Thaps28825;Parent=Thaps28825;rank=3 chr6 . exon 1928356 1930270 . - . ID=Thaps28825.3;Parent=Thaps28825;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1930370 1930986 . - 0 ID=Thaps28825;Parent=Thaps28825;rank=2 chr6 . exon 1930370 1930986 . - . ID=Thaps28825.2;Parent=Thaps28825;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1931083 1931160 . - 0 ID=Thaps28825;Parent=Thaps28825;rank=1 chr6 . exon 1931083 1931160 . - . ID=Thaps28825.1;Parent=Thaps28825;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1922543 1922974 . - . ID=Thaps6572;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4P9];external_name=Thaps6572;logic_name=jgi_thaps3 chr6 ensembl transcript 1922543 1922974 . - . ID=Thaps6572;Parent=Thaps6572;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1922543 1922974 . - 0 ID=Thaps6572;Parent=Thaps6572;rank=1 chr6 . exon 1922543 1922974 . - . ID=Thaps6572.1;Parent=Thaps6572;constitutive=1;rank=1 chr6 . repeat_region 1933680 1933711 . ? . description=dust chr6 . repeat_region 1935564 1935603 . ? . description=dust chr6 ensembl protein_coding_gene 1934510 1936564 . - . ID=Thaps263031;biotype=protein_coding;description=Rad23 like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q4];external_name=RAD23;logic_name=jgi_thaps3 chr6 ensembl transcript 1934510 1936564 . - . ID=Thaps263031;Parent=Thaps263031;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1934510 1934644 . - 0 ID=Thaps263031;Parent=Thaps263031;rank=7 chr6 . exon 1934510 1934644 . - . ID=Thaps263031.7;Parent=Thaps263031;constitutive=1;rank=7 chr6 . CDS 1934705 1934762 . - 0 ID=Thaps263031;Parent=Thaps263031;rank=6 chr6 . exon 1934705 1934762 . - . ID=Thaps263031.6;Parent=Thaps263031;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . CDS 1934970 1935478 . - 0 ID=Thaps263031;Parent=Thaps263031;rank=5 chr6 . exon 1934970 1935478 . - . ID=Thaps263031.5;Parent=Thaps263031;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1935703 1935753 . - 0 ID=Thaps263031;Parent=Thaps263031;rank=4 chr6 . exon 1935703 1935753 . - . ID=Thaps263031.4;Parent=Thaps263031;constitutive=1;rank=4 chr6 . CDS 1935769 1935775 . - 0 ID=Thaps263031;Parent=Thaps263031;rank=3 chr6 . exon 1935769 1935775 . - . ID=Thaps263031.3;Parent=Thaps263031;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1935967 1936122 . - 0 ID=Thaps263031;Parent=Thaps263031;rank=2 chr6 . exon 1935967 1936122 . - . ID=Thaps263031.2;Parent=Thaps263031;constitutive=1;rank=2 chr6 . CDS 1936475 1936564 . - 0 ID=Thaps263031;Parent=Thaps263031;rank=1 chr6 . exon 1936475 1936564 . - . ID=Thaps263031.1;Parent=Thaps263031;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1937050 1937412 . + . ID=Thaps34701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q5];external_name=Thaps34701;logic_name=jgi_thaps3 chr6 ensembl transcript 1937050 1937412 . + . ID=Thaps34701;Parent=Thaps34701;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1937050 1937191 . + 0 ID=Thaps34701;Parent=Thaps34701;rank=1 chr6 . exon 1937050 1937191 . + . ID=Thaps34701.1;Parent=Thaps34701;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1937279 1937412 . + 0 ID=Thaps34701;Parent=Thaps34701;rank=2 chr6 . exon 1937279 1937412 . + . ID=Thaps34701.2;Parent=Thaps34701;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1939042 1939515 . - . ID=Thaps35084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q6];external_name=Thaps35084;logic_name=jgi_thaps3 chr6 ensembl transcript 1939042 1939515 . - . ID=Thaps35084;Parent=Thaps35084;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1939042 1939515 . - 0 ID=Thaps35084;Parent=Thaps35084;rank=1 chr6 . exon 1939042 1939515 . - . ID=Thaps35084.1;Parent=Thaps35084;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1933312 1934153 . + . ID=Thaps6576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q3];external_name=Thaps6576;logic_name=jgi_thaps3 chr6 ensembl transcript 1933312 1934153 . + . ID=Thaps6576;Parent=Thaps6576;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1933312 1933654 . + 0 ID=Thaps6576;Parent=Thaps6576;rank=1 chr6 . exon 1933312 1933654 . + . ID=Thaps6576.1;Parent=Thaps6576;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1933807 1934153 . + 0 ID=Thaps6576;Parent=Thaps6576;rank=2 chr6 . exon 1933807 1934153 . + . ID=Thaps6576.2;Parent=Thaps6576;constitutive=1;ensembl_end_phase=2;rank=2 chr6 ensembl protein_coding_gene 1940469 1941665 . + . ID=Thaps6580;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q7];external_name=Thaps6580;logic_name=jgi_thaps3 chr6 ensembl transcript 1940469 1941665 . + . ID=Thaps6580;Parent=Thaps6580;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1940469 1940933 . + 0 ID=Thaps6580;Parent=Thaps6580;rank=1 chr6 . exon 1940469 1940933 . + . ID=Thaps6580.1;Parent=Thaps6580;constitutive=1;rank=1 chr6 . CDS 1940975 1941112 . + 0 ID=Thaps6580;Parent=Thaps6580;rank=2 chr6 . exon 1940975 1941112 . + . ID=Thaps6580.2;Parent=Thaps6580;constitutive=1;rank=2 chr6 . CDS 1941191 1941401 . + 0 ID=Thaps6580;Parent=Thaps6580;rank=3 chr6 . exon 1941191 1941401 . + . ID=Thaps6580.3;Parent=Thaps6580;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1941496 1941665 . + 0 ID=Thaps6580;Parent=Thaps6580;rank=4 chr6 . exon 1941496 1941665 . + . ID=Thaps6580.4;Parent=Thaps6580;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . biological_region 1949997 1949999 0.999 + . logic_name=eponine chr6 . repeat_region 1950406 1950455 . ? . description=trf chr6 . repeat_region 1951030 1951053 . ? . description=trf chr6 ensembl protein_coding_gene 1950844 1952460 . + . ID=Thaps269188;biotype=protein_coding;description=Cytoplasmic dynein intermediate chain-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4R0];external_name=DIC1;logic_name=jgi_thaps3 chr6 ensembl transcript 1950844 1952460 . + . ID=Thaps269188;Parent=Thaps269188;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1950844 1951056 . + 0 ID=Thaps269188;Parent=Thaps269188;rank=1 chr6 . exon 1950844 1951056 . + . ID=Thaps269188.1;Parent=Thaps269188;constitutive=1;rank=1 chr6 . CDS 1951267 1951654 . + 0 ID=Thaps269188;Parent=Thaps269188;rank=2 chr6 . exon 1951267 1951654 . + . ID=Thaps269188.2;Parent=Thaps269188;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1951790 1952233 . + 0 ID=Thaps269188;Parent=Thaps269188;rank=3 chr6 . exon 1951790 1952233 . + . ID=Thaps269188.3;Parent=Thaps269188;constitutive=1;rank=3 chr6 . CDS 1952270 1952460 . + 0 ID=Thaps269188;Parent=Thaps269188;rank=4 chr6 ensembl protein_coding_gene 1942386 1946180 . - . ID=Thaps6581;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q8];external_name=Thaps6581;logic_name=jgi_thaps3 chr6 ensembl transcript 1942386 1946180 . - . ID=Thaps6581;Parent=Thaps6581;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1942386 1943364 . - 0 ID=Thaps6581;Parent=Thaps6581;rank=5 chr6 . exon 1942386 1943364 . - . ID=Thaps6581.5;Parent=Thaps6581;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 1943709 1944056 . - 0 ID=Thaps6581;Parent=Thaps6581;rank=4 chr6 . exon 1943709 1944056 . - . ID=Thaps6581.4;Parent=Thaps6581;constitutive=1;rank=4 chr6 . CDS 1944127 1945241 . - 0 ID=Thaps6581;Parent=Thaps6581;rank=3 chr6 . exon 1944127 1945241 . - . ID=Thaps6581.3;Parent=Thaps6581;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1945323 1945596 . - 0 ID=Thaps6581;Parent=Thaps6581;rank=2 chr6 . exon 1945323 1945596 . - . ID=Thaps6581.2;Parent=Thaps6581;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1945684 1946180 . - 0 ID=Thaps6581;Parent=Thaps6581;rank=1 chr6 . exon 1945684 1946180 . - . ID=Thaps6581.1;Parent=Thaps6581;constitutive=1;ensembl_end_phase=2;rank=1 chr6 ensembl protein_coding_gene 1946261 1947881 . - . ID=Thaps6582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4Q9];external_name=Thaps6582;logic_name=jgi_thaps3 chr6 ensembl transcript 1946261 1947881 . - . ID=Thaps6582;Parent=Thaps6582;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1946261 1947223 . - 0 ID=Thaps6582;Parent=Thaps6582;rank=2 chr6 . exon 1946261 1947223 . - . ID=Thaps6582.2;Parent=Thaps6582;constitutive=1;rank=2 chr6 . CDS 1947324 1947881 . - 0 ID=Thaps6582;Parent=Thaps6582;rank=1 chr6 . exon 1947324 1947881 . - . ID=Thaps6582.1;Parent=Thaps6582;constitutive=1;rank=1 chr6 . repeat_region 1953892 1953917 . ? . description=dust chr6 . repeat_region 1954165 1954187 . ? . description=dust chr6 . exon 1952270 1952460 . + . ID=Thaps269188.4;Parent=Thaps269188;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl protein_coding_gene 1959311 1961206 . + . ID=Thaps34881;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4R4];external_name=Thaps34881;logic_name=jgi_thaps3 chr6 ensembl transcript 1959311 1961206 . + . ID=Thaps34881;Parent=Thaps34881;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1959311 1959856 . + 0 ID=Thaps34881;Parent=Thaps34881;rank=1 chr6 . exon 1959311 1959856 . + . ID=Thaps34881.1;Parent=Thaps34881;constitutive=1;rank=1 chr6 . CDS 1959944 1960256 . + 0 ID=Thaps34881;Parent=Thaps34881;rank=2 chr6 . exon 1959944 1960256 . + . ID=Thaps34881.2;Parent=Thaps34881;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1960638 1961206 . + 0 ID=Thaps34881;Parent=Thaps34881;rank=3 chr6 . exon 1960638 1961206 . + . ID=Thaps34881.3;Parent=Thaps34881;constitutive=1;ensembl_end_phase=2;rank=3 chr6 ensembl protein_coding_gene 1953210 1954817 . - . ID=Thaps6584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4R1];external_name=Thaps6584;logic_name=jgi_thaps3 chr6 ensembl transcript 1953210 1954817 . - . ID=Thaps6584;Parent=Thaps6584;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1953210 1954817 . - 0 ID=Thaps6584;Parent=Thaps6584;rank=1 chr6 . exon 1953210 1954817 . - . ID=Thaps6584.1;Parent=Thaps6584;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1955083 1956303 . - . ID=Thaps6585;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4R2];external_name=Thaps6585;logic_name=jgi_thaps3 chr6 ensembl transcript 1955083 1956303 . - . ID=Thaps6585;Parent=Thaps6585;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1955083 1956303 . - 0 ID=Thaps6585;Parent=Thaps6585;rank=1 chr6 . exon 1955083 1956303 . - . ID=Thaps6585.1;Parent=Thaps6585;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1956785 1958059 . + . ID=Thaps6586;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4R3];external_name=Thaps6586;logic_name=jgi_thaps3 chr6 ensembl transcript 1956785 1958059 . + . ID=Thaps6586;Parent=Thaps6586;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1956785 1958059 . + 0 ID=Thaps6586;Parent=Thaps6586;rank=1 chr6 . exon 1956785 1958059 . + . ID=Thaps6586.1;Parent=Thaps6586;constitutive=1;rank=1 chr6 . repeat_region 1962592 1962621 . ? . description=trf chr6 ensembl protein_coding_gene 1965234 1967200 . + . ID=Thaps263033;biotype=protein_coding;description=DNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8C4R5];external_name=Thaps263033;logic_name=jgi_thaps3 chr6 ensembl transcript 1965234 1967200 . + . ID=Thaps263033;Parent=Thaps263033;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1965234 1965843 . + 0 ID=Thaps263033;Parent=Thaps263033;rank=1 chr6 . exon 1965234 1965843 . + . ID=Thaps263033.1;Parent=Thaps263033;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1965886 1965920 . + 0 ID=Thaps263033;Parent=Thaps263033;rank=2 chr6 . exon 1965886 1965920 . + . ID=Thaps263033.2;Parent=Thaps263033;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1966094 1966502 . + 0 ID=Thaps263033;Parent=Thaps263033;rank=3 chr6 . exon 1966094 1966502 . + . ID=Thaps263033.3;Parent=Thaps263033;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 1966592 1966644 . + 0 ID=Thaps263033;Parent=Thaps263033;rank=4 chr6 . exon 1966592 1966644 . + . ID=Thaps263033.4;Parent=Thaps263033;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1966716 1966930 . + 0 ID=Thaps263033;Parent=Thaps263033;rank=5 chr6 . exon 1966716 1966930 . + . ID=Thaps263033.5;Parent=Thaps263033;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1967022 1967200 . + 0 ID=Thaps263033;Parent=Thaps263033;rank=6 chr6 . exon 1967022 1967200 . + . ID=Thaps263033.6;Parent=Thaps263033;constitutive=1;ensembl_end_phase=2;rank=6 chr6 ensembl protein_coding_gene 1971036 1971395 . - . ID=Thaps263034;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4R7];external_name=Thaps263034;logic_name=jgi_thaps3 chr6 ensembl transcript 1971036 1971395 . - . ID=Thaps263034;Parent=Thaps263034;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1971036 1971395 . - 0 ID=Thaps263034;Parent=Thaps263034;rank=1 chr6 . exon 1971036 1971395 . - . ID=Thaps263034.1;Parent=Thaps263034;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1967461 1970485 . - . ID=Thaps6589;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4R6];external_name=Thaps6589;logic_name=jgi_thaps3 chr6 ensembl transcript 1967461 1970485 . - . ID=Thaps6589;Parent=Thaps6589;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1967461 1967534 . - 0 ID=Thaps6589;Parent=Thaps6589;rank=5 chr6 . exon 1967461 1967534 . - . ID=Thaps6589.5;Parent=Thaps6589;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 1967656 1967989 . - 0 ID=Thaps6589;Parent=Thaps6589;rank=4 chr6 . exon 1967656 1967989 . - . ID=Thaps6589.4;Parent=Thaps6589;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1968108 1968512 . - 0 ID=Thaps6589;Parent=Thaps6589;rank=3 chr6 . exon 1968108 1968512 . - . ID=Thaps6589.3;Parent=Thaps6589;constitutive=1;rank=3 chr6 . CDS 1968604 1970132 . - 0 ID=Thaps6589;Parent=Thaps6589;rank=2 chr6 . exon 1968604 1970132 . - . ID=Thaps6589.2;Parent=Thaps6589;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1970218 1970485 . - 0 ID=Thaps6589;Parent=Thaps6589;rank=1 chr6 . exon 1970218 1970485 . - . ID=Thaps6589.1;Parent=Thaps6589;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . repeat_region 1972898 1972922 . ? . description=dust chr6 ensembl protein_coding_gene 1974760 1982639 . + . ID=Thaps6591;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4R8];external_name=Thaps6591;logic_name=jgi_thaps3 chr6 ensembl transcript 1974760 1982639 . + . ID=Thaps6591;Parent=Thaps6591;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1974760 1975711 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=1 chr6 . exon 1974760 1975711 . + . ID=Thaps6591.1;Parent=Thaps6591;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1975907 1976176 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=2 chr6 . exon 1975907 1976176 . + . ID=Thaps6591.2;Parent=Thaps6591;constitutive=1;rank=2 chr6 . CDS 1976216 1976466 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=3 chr6 . exon 1976216 1976466 . + . ID=Thaps6591.3;Parent=Thaps6591;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1976591 1976624 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=4 chr6 . exon 1976591 1976624 . + . ID=Thaps6591.4;Parent=Thaps6591;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1976707 1976794 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=5 chr6 . exon 1976707 1976794 . + . ID=Thaps6591.5;Parent=Thaps6591;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 1976873 1978149 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=6 chr6 . exon 1976873 1978149 . + . ID=Thaps6591.6;Parent=Thaps6591;constitutive=1;ensembl_end_phase=2;rank=6 chr6 . CDS 1978230 1978607 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=7 chr6 . exon 1978230 1978607 . + . ID=Thaps6591.7;Parent=Thaps6591;constitutive=1;rank=7 chr6 . CDS 1978700 1979126 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=8 chr6 . exon 1978700 1979126 . + . ID=Thaps6591.8;Parent=Thaps6591;constitutive=1;ensembl_end_phase=1;rank=8 chr6 . CDS 1979214 1982445 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=9 chr6 . exon 1979214 1982445 . + . ID=Thaps6591.9;Parent=Thaps6591;constitutive=1;ensembl_end_phase=1;rank=9 chr6 . CDS 1982490 1982639 . + 0 ID=Thaps6591;Parent=Thaps6591;rank=10 chr6 . repeat_region 1981592 1982234 . ? . description=trf chr6 . repeat_region 1983014 1983629 . - . description=TE2b_TP chr6 . repeat_region 1983037 1983076 . ? . description=trf chr6 . repeat_region 1983567 1983606 . ? . description=trf chr6 . repeat_region 1990985 1991029 . ? . description=trf chr6 . repeat_region 1991006 1991050 . ? . description=trf chr6 ensembl protein_coding_gene 1986882 1988123 . - . ID=Thaps263035;biotype=protein_coding;description=Phosphoglycerate mutase [Source:UniProtKB/TrEMBL%3BAcc:B8C4S0];external_name=Thaps263035;logic_name=jgi_thaps3 chr6 ensembl transcript 1986882 1988123 . - . ID=Thaps263035;Parent=Thaps263035;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1986882 1987146 . - 0 ID=Thaps263035;Parent=Thaps263035;rank=6 chr6 . exon 1986882 1987146 . - . ID=Thaps263035.6;Parent=Thaps263035;constitutive=1;ensembl_end_phase=1;rank=6 chr6 . CDS 1987357 1987564 . - 0 ID=Thaps263035;Parent=Thaps263035;rank=5 chr6 . exon 1987357 1987564 . - . ID=Thaps263035.5;Parent=Thaps263035;constitutive=1;ensembl_end_phase=1;rank=5 chr6 . CDS 1987652 1987736 . - 0 ID=Thaps263035;Parent=Thaps263035;rank=4 chr6 . exon 1987652 1987736 . - . ID=Thaps263035.4;Parent=Thaps263035;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 1987766 1987773 . - 0 ID=Thaps263035;Parent=Thaps263035;rank=3 chr6 . exon 1987766 1987773 . - . ID=Thaps263035.3;Parent=Thaps263035;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 1987802 1987879 . - 0 ID=Thaps263035;Parent=Thaps263035;rank=2 chr6 . exon 1987802 1987879 . - . ID=Thaps263035.2;Parent=Thaps263035;constitutive=1;rank=2 chr6 . CDS 1988049 1988123 . - 0 ID=Thaps263035;Parent=Thaps263035;rank=1 chr6 . exon 1988049 1988123 . - . ID=Thaps263035.1;Parent=Thaps263035;constitutive=1;rank=1 chr6 . exon 1982490 1982639 . + . ID=Thaps6591.10;Parent=Thaps6591;constitutive=1;rank=10 chr6 ensembl protein_coding_gene 1983835 1985871 . + . ID=Thaps6592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4R9];external_name=Thaps6592;logic_name=jgi_thaps3 chr6 ensembl transcript 1983835 1985871 . + . ID=Thaps6592;Parent=Thaps6592;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1983835 1985871 . + 0 ID=Thaps6592;Parent=Thaps6592;rank=1 chr6 . exon 1983835 1985871 . + . ID=Thaps6592.1;Parent=Thaps6592;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1989170 1990729 . + . ID=Thaps6594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4S1];external_name=Thaps6594;logic_name=jgi_thaps3 chr6 ensembl transcript 1989170 1990729 . + . ID=Thaps6594;Parent=Thaps6594;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1989170 1990729 . + 0 ID=Thaps6594;Parent=Thaps6594;rank=1 chr6 . exon 1989170 1990729 . + . ID=Thaps6594.1;Parent=Thaps6594;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 1990927 1992792 . - . ID=Thaps6595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4S2];external_name=Thaps6595;logic_name=jgi_thaps3 chr6 ensembl transcript 1990927 1992792 . - . ID=Thaps6595;Parent=Thaps6595;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1990927 1991642 . - 0 ID=Thaps6595;Parent=Thaps6595;rank=4 chr6 . exon 1990927 1991642 . - . ID=Thaps6595.4;Parent=Thaps6595;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1991722 1992099 . - 0 ID=Thaps6595;Parent=Thaps6595;rank=3 chr6 . exon 1991722 1992099 . - . ID=Thaps6595.3;Parent=Thaps6595;constitutive=1;rank=3 chr6 . CDS 1992180 1992299 . - 0 ID=Thaps6595;Parent=Thaps6595;rank=2 chr6 . CDS 1992390 1992792 . - 0 ID=Thaps6595;Parent=Thaps6595;rank=1 chr6 . repeat_region 1998719 1998740 . ? . description=dust chr6 . repeat_region 1998849 1998868 . ? . description=dust chr6 . repeat_region 1998915 1998957 . ? . description=dust chr6 ensembl protein_coding_gene 1998799 1999858 . + . ID=Thaps263036;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4S5];external_name=Thaps263036;logic_name=jgi_thaps3 chr6 ensembl transcript 1998799 1999858 . + . ID=Thaps263036;Parent=Thaps263036;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1998799 1998837 . + 0 ID=Thaps263036;Parent=Thaps263036;rank=1 chr6 . exon 1998799 1998837 . + . ID=Thaps263036.1;Parent=Thaps263036;constitutive=1;rank=1 chr6 . CDS 1998910 1999139 . + 0 ID=Thaps263036;Parent=Thaps263036;rank=2 chr6 . exon 1998910 1999139 . + . ID=Thaps263036.2;Parent=Thaps263036;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 1999170 1999283 . + 0 ID=Thaps263036;Parent=Thaps263036;rank=3 chr6 . exon 1999170 1999283 . + . ID=Thaps263036.3;Parent=Thaps263036;constitutive=1;rank=3 chr6 . CDS 1999369 1999472 . + 0 ID=Thaps263036;Parent=Thaps263036;rank=4 chr6 . exon 1999369 1999472 . + . ID=Thaps263036.4;Parent=Thaps263036;constitutive=1;ensembl_end_phase=2;rank=4 chr6 . CDS 1999575 1999858 . + 0 ID=Thaps263036;Parent=Thaps263036;rank=5 chr6 . exon 1999575 1999858 . + . ID=Thaps263036.5;Parent=Thaps263036;constitutive=1;ensembl_end_phase=2;rank=5 chr6 ensembl protein_coding_gene 1993522 1995051 . + . ID=Thaps34729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4S3];external_name=Thaps34729;logic_name=jgi_thaps3 chr6 ensembl transcript 1993522 1995051 . + . ID=Thaps34729;Parent=Thaps34729;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1993522 1993960 . + 0 ID=Thaps34729;Parent=Thaps34729;rank=1 chr6 . exon 1993522 1993960 . + . ID=Thaps34729.1;Parent=Thaps34729;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 1994033 1994108 . + 0 ID=Thaps34729;Parent=Thaps34729;rank=2 chr6 . exon 1994033 1994108 . + . ID=Thaps34729.2;Parent=Thaps34729;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1994184 1995051 . + 0 ID=Thaps34729;Parent=Thaps34729;rank=3 chr6 . exon 1994184 1995051 . + . ID=Thaps34729.3;Parent=Thaps34729;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 2000098 2001671 . - . ID=Thaps41246;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4S6];external_name=Thaps41246;logic_name=jgi_thaps3 chr6 ensembl transcript 2000098 2001671 . - . ID=Thaps41246;Parent=Thaps41246;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2000098 2000953 . - 0 ID=Thaps41246;Parent=Thaps41246;rank=4 chr6 . exon 2000098 2000953 . - . ID=Thaps41246.4;Parent=Thaps41246;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 2001046 2001115 . - 0 ID=Thaps41246;Parent=Thaps41246;rank=3 chr6 . exon 2001046 2001115 . - . ID=Thaps41246.3;Parent=Thaps41246;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 2001194 2001488 . - 0 ID=Thaps41246;Parent=Thaps41246;rank=2 chr6 . exon 2001194 2001488 . - . ID=Thaps41246.2;Parent=Thaps41246;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 2001531 2001671 . - 0 ID=Thaps41246;Parent=Thaps41246;rank=1 chr6 . exon 2001531 2001671 . - . ID=Thaps41246.1;Parent=Thaps41246;constitutive=1;rank=1 chr6 . exon 1992180 1992299 . - . ID=Thaps6595.2;Parent=Thaps6595;constitutive=1;rank=2 chr6 . exon 1992390 1992792 . - . ID=Thaps6595.1;Parent=Thaps6595;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 1995592 1997459 . - . ID=Thaps6597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4S4];external_name=Thaps6597;logic_name=jgi_thaps3 chr6 ensembl transcript 1995592 1997459 . - . ID=Thaps6597;Parent=Thaps6597;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 1995592 1995624 . - 0 ID=Thaps6597;Parent=Thaps6597;rank=4 chr6 . exon 1995592 1995624 . - . ID=Thaps6597.4;Parent=Thaps6597;constitutive=1;rank=4 chr6 . CDS 1995668 1995910 . - 0 ID=Thaps6597;Parent=Thaps6597;rank=3 chr6 . exon 1995668 1995910 . - . ID=Thaps6597.3;Parent=Thaps6597;constitutive=1;rank=3 chr6 . CDS 1995993 1996821 . - 0 ID=Thaps6597;Parent=Thaps6597;rank=2 chr6 . exon 1995993 1996821 . - . ID=Thaps6597.2;Parent=Thaps6597;constitutive=1;ensembl_end_phase=1;rank=2 chr6 . CDS 1996927 1997459 . - 0 ID=Thaps6597;Parent=Thaps6597;rank=1 chr6 . exon 1996927 1997459 . - . ID=Thaps6597.1;Parent=Thaps6597;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 2010768 2011411 . + . description=Gypsy3LTR_TP chr6 . repeat_region 2011268 2011322 . ? . description=trf chr6 . repeat_region 2011412 2016882 . + . description=Gypsy3I_TP chr6 ensembl protein_coding_gene 2007363 2007985 . + . ID=Thaps28842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4S9];external_name=Thaps28842;logic_name=jgi_thaps3 chr6 ensembl transcript 2007363 2007985 . + . ID=Thaps28842;Parent=Thaps28842;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2007363 2007641 . + 0 ID=Thaps28842;Parent=Thaps28842;rank=1 chr6 . exon 2007363 2007641 . + . ID=Thaps28842.1;Parent=Thaps28842;constitutive=1;rank=1 chr6 . CDS 2007755 2007985 . + 0 ID=Thaps28842;Parent=Thaps28842;rank=2 chr6 . exon 2007755 2007985 . + . ID=Thaps28842.2;Parent=Thaps28842;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 2005085 2006593 . - . ID=Thaps34900;biotype=protein_coding;description=Probable homogentisate 1%2C2-dioxygenase [Source:UniProtKB/TrEMBL%3BAcc:B8C4S8];external_name=Thaps34900;logic_name=jgi_thaps3 chr6 ensembl transcript 2005085 2006593 . - . ID=Thaps34900;Parent=Thaps34900;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2005085 2006271 . - 0 ID=Thaps34900;Parent=Thaps34900;rank=2 chr6 . exon 2005085 2006271 . - . ID=Thaps34900.2;Parent=Thaps34900;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 2006347 2006593 . - 0 ID=Thaps34900;Parent=Thaps34900;rank=1 chr6 . exon 2006347 2006593 . - . ID=Thaps34900.1;Parent=Thaps34900;constitutive=1;ensembl_end_phase=1;rank=1 chr6 ensembl protein_coding_gene 2004124 2004619 . + . ID=Thaps6600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4S7];external_name=Thaps6600;logic_name=jgi_thaps3 chr6 ensembl transcript 2004124 2004619 . + . ID=Thaps6600;Parent=Thaps6600;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2004124 2004381 . + 0 ID=Thaps6600;Parent=Thaps6600;rank=1 chr6 . exon 2004124 2004381 . + . ID=Thaps6600.1;Parent=Thaps6600;constitutive=1;rank=1 chr6 . CDS 2004515 2004619 . + 0 ID=Thaps6600;Parent=Thaps6600;rank=2 chr6 . exon 2004515 2004619 . + . ID=Thaps6600.2;Parent=Thaps6600;constitutive=1;rank=2 chr6 ensembl protein_coding_gene 2008645 2010519 . + . ID=Thaps6603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T0];external_name=Thaps6603;logic_name=jgi_thaps3 chr6 ensembl transcript 2008645 2010519 . + . ID=Thaps6603;Parent=Thaps6603;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2008645 2009005 . + 0 ID=Thaps6603;Parent=Thaps6603;rank=1 chr6 . exon 2008645 2009005 . + . ID=Thaps6603.1;Parent=Thaps6603;constitutive=1;ensembl_end_phase=1;rank=1 chr6 . CDS 2009097 2009695 . + 0 ID=Thaps6603;Parent=Thaps6603;rank=2 chr6 . exon 2009097 2009695 . + . ID=Thaps6603.2;Parent=Thaps6603;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 2009793 2009886 . + 0 ID=Thaps6603;Parent=Thaps6603;rank=3 chr6 . exon 2009793 2009886 . + . ID=Thaps6603.3;Parent=Thaps6603;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 2009960 2010519 . + 0 ID=Thaps6603;Parent=Thaps6603;rank=4 chr6 . exon 2009960 2010519 . + . ID=Thaps6603.4;Parent=Thaps6603;constitutive=1;ensembl_end_phase=2;rank=4 chr6 ensembl gene 2014261 2014841 . + . ID=Thaps263039;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr6 ensembl transcript 2014261 2014841 . + . ID=Thaps263039;Parent=Thaps263039;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr6 . exon 2014261 2014458 . + . ID=Thaps263039.1;Parent=Thaps263039;constitutive=1;rank=1 chr6 . exon 2014483 2014718 . + . ID=Thaps263039.2;Parent=Thaps263039;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . exon 2014758 2014841 . + . ID=Thaps263039.3;Parent=Thaps263039;constitutive=1;rank=3 chr6 ensembl protein_coding_gene 2017597 2018436 . + . ID=Thaps6604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T1];external_name=Thaps6604;logic_name=jgi_thaps3 chr6 ensembl transcript 2017597 2018436 . + . ID=Thaps6604;Parent=Thaps6604;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2017597 2018436 . + 0 ID=Thaps6604;Parent=Thaps6604;rank=1 chr6 . exon 2017597 2018436 . + . ID=Thaps6604.1;Parent=Thaps6604;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 2019510 2020382 . + . ID=Thaps6605;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T2];external_name=Thaps6605;logic_name=jgi_thaps3 chr6 ensembl transcript 2019510 2020382 . + . ID=Thaps6605;Parent=Thaps6605;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2019510 2019760 . + 0 ID=Thaps6605;Parent=Thaps6605;rank=1 chr6 . exon 2019510 2019760 . + . ID=Thaps6605.1;Parent=Thaps6605;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . CDS 2019839 2020382 . + 0 ID=Thaps6605;Parent=Thaps6605;rank=2 chr6 . exon 2019839 2020382 . + . ID=Thaps6605.2;Parent=Thaps6605;constitutive=1;ensembl_end_phase=1;rank=2 chr6 ensembl protein_coding_gene 2020753 2022821 . - . ID=Thaps6606;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T3];external_name=Thaps6606;logic_name=jgi_thaps3 chr6 ensembl transcript 2020753 2022821 . - . ID=Thaps6606;Parent=Thaps6606;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2020753 2022177 . - 0 ID=Thaps6606;Parent=Thaps6606;rank=2 chr6 . exon 2020753 2022177 . - . ID=Thaps6606.2;Parent=Thaps6606;constitutive=1;rank=2 chr6 . CDS 2022516 2022821 . - 0 ID=Thaps6606;Parent=Thaps6606;rank=1 chr6 . repeat_region 2023312 2023337 . ? . description=trf chr6 . repeat_region 2024599 2024623 . ? . description=trf chr6 . repeat_region 2024599 2024623 . ? . description=dust chr6 . repeat_region 2026003 2026040 . ? . description=dust chr6 ensembl protein_coding_gene 2027241 2028884 . + . ID=Thaps23327;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T6];external_name=Thaps23327;logic_name=jgi_thaps3 chr6 ensembl transcript 2027241 2028884 . + . ID=Thaps23327;Parent=Thaps23327;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2027241 2028884 . + 0 ID=Thaps23327;Parent=Thaps23327;rank=1 chr6 . exon 2027241 2028884 . + . ID=Thaps23327.1;Parent=Thaps23327;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 2029308 2031588 . - . ID=Thaps23329;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T7];external_name=Thaps23329;logic_name=jgi_thaps3 chr6 ensembl transcript 2029308 2031588 . - . ID=Thaps23329;Parent=Thaps23329;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2029308 2029532 . - 0 ID=Thaps23329;Parent=Thaps23329;rank=4 chr6 . exon 2029308 2029532 . - . ID=Thaps23329.4;Parent=Thaps23329;constitutive=1;rank=4 chr6 . CDS 2029627 2030655 . - 0 ID=Thaps23329;Parent=Thaps23329;rank=3 chr6 . exon 2029627 2030655 . - . ID=Thaps23329.3;Parent=Thaps23329;constitutive=1;rank=3 chr6 . CDS 2031070 2031465 . - 0 ID=Thaps23329;Parent=Thaps23329;rank=2 chr6 . exon 2031070 2031465 . - . ID=Thaps23329.2;Parent=Thaps23329;constitutive=1;rank=2 chr6 . CDS 2031577 2031588 . - 0 ID=Thaps23329;Parent=Thaps23329;rank=1 chr6 . exon 2031577 2031588 . - . ID=Thaps23329.1;Parent=Thaps23329;constitutive=1;rank=1 chr6 . exon 2022516 2022821 . - . ID=Thaps6606.1;Parent=Thaps6606;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 2023447 2023950 . + . ID=Thaps6607;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T4];external_name=Thaps6607;logic_name=jgi_thaps3 chr6 ensembl transcript 2023447 2023950 . + . ID=Thaps6607;Parent=Thaps6607;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2023447 2023950 . + 0 ID=Thaps6607;Parent=Thaps6607;rank=1 chr6 . exon 2023447 2023950 . + . ID=Thaps6607.1;Parent=Thaps6607;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 2024192 2027004 . - . ID=Thaps6608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T5];external_name=Thaps6608;logic_name=jgi_thaps3 chr6 ensembl transcript 2024192 2027004 . - . ID=Thaps6608;Parent=Thaps6608;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2024192 2024587 . - 0 ID=Thaps6608;Parent=Thaps6608;rank=6 chr6 . exon 2024192 2024587 . - . ID=Thaps6608.6;Parent=Thaps6608;constitutive=1;rank=6 chr6 . CDS 2024703 2024729 . - 0 ID=Thaps6608;Parent=Thaps6608;rank=5 chr6 . exon 2024703 2024729 . - . ID=Thaps6608.5;Parent=Thaps6608;constitutive=1;rank=5 chr6 . CDS 2024814 2024912 . - 0 ID=Thaps6608;Parent=Thaps6608;rank=4 chr6 . exon 2024814 2024912 . - . ID=Thaps6608.4;Parent=Thaps6608;constitutive=1;rank=4 chr6 . CDS 2025007 2025053 . - 0 ID=Thaps6608;Parent=Thaps6608;rank=3 chr6 . exon 2025007 2025053 . - . ID=Thaps6608.3;Parent=Thaps6608;constitutive=1;ensembl_end_phase=2;rank=3 chr6 . CDS 2025165 2025799 . - 0 ID=Thaps6608;Parent=Thaps6608;rank=2 chr6 . exon 2025165 2025799 . - . ID=Thaps6608.2;Parent=Thaps6608;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 2025950 2027004 . - 0 ID=Thaps6608;Parent=Thaps6608;rank=1 chr6 . exon 2025950 2027004 . - . ID=Thaps6608.1;Parent=Thaps6608;constitutive=1;ensembl_end_phase=2;rank=1 chr6 . repeat_region 2033399 2033427 . - . description=Harbinger2N_TP chr6 . repeat_region 2033524 2033603 . + . description=Harbinger2N_TP chr6 . repeat_region 2033712 2034517 . + . description=TE2c_TP chr6 . repeat_region 2035071 2035592 . - . description=MuDR2_TP chr6 . repeat_region 2039281 2039305 . - . description=Gypsy3LTR_TP chr6 . repeat_region 2039302 2039726 . - . description=Gypsy3LTR_TP chr6 . repeat_region 2039729 2040290 . - . description=Gypsy3I_TP chr6 . repeat_region 2041709 2043177 . - . description=Gypsy3I_TP chr6 ensembl protein_coding_gene 2037813 2038328 . - . ID=Thaps17593;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T9];external_name=Thaps17593;logic_name=jgi_thaps3 chr6 ensembl transcript 2037813 2038328 . - . ID=Thaps17593;Parent=Thaps17593;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2037813 2038328 . - 0 ID=Thaps17593;Parent=Thaps17593;rank=1 chr6 . exon 2037813 2038328 . - . ID=Thaps17593.1;Parent=Thaps17593;constitutive=1;rank=1 chr6 ensembl protein_coding_gene 2032139 2033225 . + . ID=Thaps6612;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4T8];external_name=Thaps6612;logic_name=jgi_thaps3 chr6 ensembl transcript 2032139 2033225 . + . ID=Thaps6612;Parent=Thaps6612;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2032139 2032318 . + 0 ID=Thaps6612;Parent=Thaps6612;rank=1 chr6 . exon 2032139 2032318 . + . ID=Thaps6612.1;Parent=Thaps6612;constitutive=1;rank=1 chr6 . CDS 2032385 2032650 . + 0 ID=Thaps6612;Parent=Thaps6612;rank=2 chr6 . exon 2032385 2032650 . + . ID=Thaps6612.2;Parent=Thaps6612;constitutive=1;ensembl_end_phase=2;rank=2 chr6 . CDS 2032808 2033225 . + 0 ID=Thaps6612;Parent=Thaps6612;rank=3 chr6 . exon 2032808 2033225 . + . ID=Thaps6612.3;Parent=Thaps6612;constitutive=1;ensembl_end_phase=1;rank=3 chr6 ensembl protein_coding_gene 2040712 2041458 . - . ID=Thaps6614;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U0];external_name=Thaps6614;logic_name=jgi_thaps3 chr6 ensembl transcript 2040712 2041458 . - . ID=Thaps6614;Parent=Thaps6614;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2040712 2041458 . - 0 ID=Thaps6614;Parent=Thaps6614;rank=1 chr6 . exon 2040712 2041458 . - . ID=Thaps6614.1;Parent=Thaps6614;constitutive=1;rank=1 chr6 . repeat_region 2044201 2044853 . + . description=Harbinger1_TP chr6 . repeat_region 2044913 2045031 . + . description=Harbinger1_TP chr6 . repeat_region 2045018 2045086 . + . description=Harbinger1_TP chr6 . repeat_region 2045534 2045571 . - . description=MuDR1_TP chr6 . repeat_region 2045734 2045817 . + . description=MuDR1_TP chr6 . repeat_region 2046063 2046100 . ? . description=trf chr6 . repeat_region 2046190 2046220 . ? . description=trf chr6 ensembl protein_coding_gene 2046310 2047220 . + . ID=Thaps6615;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U1];external_name=Thaps6615;logic_name=jgi_thaps3 chr6 ensembl transcript 2046310 2047220 . + . ID=Thaps6615;Parent=Thaps6615;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2046310 2046483 . + 0 ID=Thaps6615;Parent=Thaps6615;rank=1 chr6 . exon 2046310 2046483 . + . ID=Thaps6615.1;Parent=Thaps6615;constitutive=1;rank=1 chr6 . CDS 2046585 2046608 . + 0 ID=Thaps6615;Parent=Thaps6615;rank=2 chr6 . exon 2046585 2046608 . + . ID=Thaps6615.2;Parent=Thaps6615;constitutive=1;rank=2 chr6 . CDS 2046900 2047220 . + 0 ID=Thaps6615;Parent=Thaps6615;rank=3 chr6 . exon 2046900 2047220 . + . ID=Thaps6615.3;Parent=Thaps6615;constitutive=1;rank=3 chr6 . repeat_region 2055093 2055400 . + . description=Copia5LTR_TP chr6 . repeat_region 2056675 2056724 . ? . description=dust chr6 . repeat_region 2057811 2057927 . - . description=Harbinger2N_TP chr6 . repeat_region 2057813 2057883 . ? . description=dust chr6 . repeat_region 2057908 2058332 . - . description=Harbinger2N_TP chr6 . repeat_region 2057956 2058081 . ? . description=dust chr6 . repeat_region 2058089 2058302 . ? . description=dust chr6 . repeat_region 2059828 2060284 . - . description=Harbinger2N_TP chr6 . repeat_region 2059882 2060087 . ? . description=dust chr6 . repeat_region 2060286 2060485 . - . description=Harbinger2N_TP chr6 . repeat_region 2060296 2060383 . ? . description=dust chr6 . repeat_region 2060964 2061504 . ? . description=dust chr6 ensembl protein_coding_gene 2053179 2054997 . + . ID=Thaps6616;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U2];external_name=Thaps6616;logic_name=jgi_thaps3 chr6 ensembl transcript 2053179 2054997 . + . ID=Thaps6616;Parent=Thaps6616;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2053179 2053313 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=1 chr6 . exon 2053179 2053313 . + . ID=Thaps6616.1;Parent=Thaps6616;constitutive=1;rank=1 chr6 . CDS 2053366 2053458 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=2 chr6 . exon 2053366 2053458 . + . ID=Thaps6616.2;Parent=Thaps6616;constitutive=1;rank=2 chr6 . CDS 2053676 2053712 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=3 chr6 . exon 2053676 2053712 . + . ID=Thaps6616.3;Parent=Thaps6616;constitutive=1;ensembl_end_phase=1;rank=3 chr6 . CDS 2053787 2053823 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=4 chr6 . exon 2053787 2053823 . + . ID=Thaps6616.4;Parent=Thaps6616;constitutive=1;ensembl_end_phase=1;rank=4 chr6 . CDS 2053944 2054107 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=5 chr6 . exon 2053944 2054107 . + . ID=Thaps6616.5;Parent=Thaps6616;constitutive=1;ensembl_end_phase=2;rank=5 chr6 . CDS 2054186 2054362 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=6 chr6 . exon 2054186 2054362 . + . ID=Thaps6616.6;Parent=Thaps6616;constitutive=1;rank=6 chr6 . CDS 2054448 2054480 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=7 chr6 . exon 2054448 2054480 . + . ID=Thaps6616.7;Parent=Thaps6616;constitutive=1;rank=7 chr6 . CDS 2054559 2054595 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=8 chr6 . exon 2054559 2054595 . + . ID=Thaps6616.8;Parent=Thaps6616;constitutive=1;ensembl_end_phase=1;rank=8 chr6 . CDS 2054716 2054879 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=9 chr6 . exon 2054716 2054879 . + . ID=Thaps6616.9;Parent=Thaps6616;constitutive=1;ensembl_end_phase=2;rank=9 chr6 . CDS 2054975 2054997 . + 0 ID=Thaps6616;Parent=Thaps6616;rank=10 chr6 . exon 2054975 2054997 . + . ID=Thaps6616.10;Parent=Thaps6616;constitutive=1;ensembl_end_phase=2;rank=10 chr6 . repeat_region 2061885 2061911 . ? . description=trf chr6 . repeat_region 2066697 2066990 . ? . description=trf chr6 . repeat_region 2066697 2066992 . ? . description=trf chr6 . repeat_region 2066769 2067005 . ? . description=trf chr6 . repeat_region 2066961 2067262 . ? . description=trf chr6 . repeat_region 2067074 2067116 . ? . description=trf chr6 . repeat_region 2067077 2067119 . ? . description=trf chr6 . repeat_region 2067237 2067304 . ? . description=trf chr6 . repeat_region 2067365 2067393 . ? . description=trf chr6 . repeat_region 2067471 2067543 . ? . description=trf chr6 . repeat_region 2067487 2067557 . ? . description=trf chr6 . repeat_region 2067688 2067741 . - . description=MuDR1_TP chr6 . repeat_region 2069407 2069619 . - . description=tp14_ASNotSingleton chr6 . repeat_region 2069962 2070524 . - . description=TE2_TP chr6 . repeat_region 2070206 2070240 . ? . description=trf chr6 . repeat_region 2070246 2070290 . ? . description=trf chr6 . repeat_region 2070462 2070501 . ? . description=trf chr6 . repeat_region 2071163 2071480 . + . description=tp16_ASNotSingleton chr6 ensembl protein_coding_gene 2068296 2068889 . + . ID=Thaps6617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C4U3];external_name=Thaps6617;logic_name=jgi_thaps3 chr6 ensembl transcript 2068296 2068889 . + . ID=Thaps6617;Parent=Thaps6617;biotype=protein_coding;logic_name=jgi_thaps3 chr6 . CDS 2068296 2068889 . + 0 ID=Thaps6617;Parent=Thaps6617;rank=1 chr6 . exon 2068296 2068889 . + . ID=Thaps6617.1;Parent=Thaps6617;constitutive=1;rank=1 ##gff-version 3 ##sequence-region 5 1 2305972 chr5 ensembl protein_coding_gene 159 1268 . - . ID=Thaps4959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K2];external_name=Thaps4959;logic_name=jgi_thaps3 chr5 ensembl transcript 159 1268 . - . ID=Thaps4959;Parent=Thaps4959;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 159 1268 . - 0 ID=Thaps4959;Parent=Thaps4959;rank=1 chr5 . exon 159 1268 . - . ID=Thaps4959.1;Parent=Thaps4959;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2374 4305 . + . ID=Thaps4960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K3];external_name=Thaps4960;logic_name=jgi_thaps3 chr5 ensembl transcript 2374 4305 . + . ID=Thaps4960;Parent=Thaps4960;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2374 4305 . + 0 ID=Thaps4960;Parent=Thaps4960;rank=1 chr5 . exon 2374 4305 . + . ID=Thaps4960.1;Parent=Thaps4960;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 4623 7672 . - . ID=Thaps4961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K4];external_name=Thaps4961;logic_name=jgi_thaps3 chr5 ensembl transcript 4623 7672 . - . ID=Thaps4961;Parent=Thaps4961;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 4623 4632 . - 0 ID=Thaps4961;Parent=Thaps4961;rank=4 chr5 . exon 4623 4632 . - . ID=Thaps4961.4;Parent=Thaps4961;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 4656 5437 . - 0 ID=Thaps4961;Parent=Thaps4961;rank=3 chr5 . exon 4656 5437 . - . ID=Thaps4961.3;Parent=Thaps4961;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 5528 5849 . - 0 ID=Thaps4961;Parent=Thaps4961;rank=2 chr5 . exon 5528 5849 . - . ID=Thaps4961.2;Parent=Thaps4961;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 5931 7672 . - 0 ID=Thaps4961;Parent=Thaps4961;rank=1 chr5 . exon 5931 7672 . - . ID=Thaps4961.1;Parent=Thaps4961;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . repeat_region 15526 15533 . ? . description=dust chr5 . repeat_region 15923 15942 . ? . description=dust chr5 . repeat_region 17060 17120 . ? . description=dust chr5 . repeat_region 17079 17116 . ? . description=trf chr5 ensembl protein_coding_gene 15666 16781 . + . ID=Thaps22511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K5];external_name=Thaps22511;logic_name=jgi_thaps3 chr5 ensembl transcript 15666 16781 . + . ID=Thaps22511;Parent=Thaps22511;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 15666 15856 . + 0 ID=Thaps22511;Parent=Thaps22511;rank=1 chr5 . exon 15666 15856 . + . ID=Thaps22511.1;Parent=Thaps22511;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 15956 16781 . + 0 ID=Thaps22511;Parent=Thaps22511;rank=2 chr5 . exon 15956 16781 . + . ID=Thaps22511.2;Parent=Thaps22511;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 18818 19151 . - . ID=Thaps262363;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K6];external_name=Thaps262363;logic_name=jgi_thaps3 chr5 ensembl transcript 18818 19151 . - . ID=Thaps262363;Parent=Thaps262363;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 18818 19151 . - 0 ID=Thaps262363;Parent=Thaps262363;rank=1 chr5 . exon 18818 19151 . - . ID=Thaps262363.1;Parent=Thaps262363;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 23303 25397 . + . ID=Thaps22513;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K7];external_name=Thaps22513;logic_name=jgi_thaps3 chr5 ensembl transcript 23303 25397 . + . ID=Thaps22513;Parent=Thaps22513;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 23303 24289 . + 0 ID=Thaps22513;Parent=Thaps22513;rank=1 chr5 . exon 23303 24289 . + . ID=Thaps22513.1;Parent=Thaps22513;constitutive=1;rank=1 chr5 . CDS 24364 24558 . + 0 ID=Thaps22513;Parent=Thaps22513;rank=2 chr5 . exon 24364 24558 . + . ID=Thaps22513.2;Parent=Thaps22513;constitutive=1;rank=2 chr5 . CDS 24637 25056 . + 0 ID=Thaps22513;Parent=Thaps22513;rank=3 chr5 . exon 24637 25056 . + . ID=Thaps22513.3;Parent=Thaps22513;constitutive=1;rank=3 chr5 . CDS 25260 25397 . + 0 ID=Thaps22513;Parent=Thaps22513;rank=4 chr5 . exon 25260 25397 . + . ID=Thaps22513.4;Parent=Thaps22513;constitutive=1;rank=4 chr5 . repeat_region 33215 33242 . ? . description=trf chr5 . repeat_region 33215 33242 . ? . description=dust chr5 . repeat_region 33809 33816 . ? . description=dust chr5 . repeat_region 39375 39429 . ? . description=trf chr5 . repeat_region 39633 39641 . ? . description=dust chr5 ensembl protein_coding_gene 33275 34431 . + . ID=Thaps34390;biotype=protein_coding;description=Inositol 1-monophosphatase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K8];external_name=Thaps34390;logic_name=jgi_thaps3 chr5 ensembl transcript 33275 34431 . + . ID=Thaps34390;Parent=Thaps34390;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 33275 33409 . + 0 ID=Thaps34390;Parent=Thaps34390;rank=1 chr5 . exon 33275 33409 . + . ID=Thaps34390.1;Parent=Thaps34390;constitutive=1;rank=1 chr5 . CDS 33748 34431 . + 0 ID=Thaps34390;Parent=Thaps34390;rank=2 chr5 . exon 33748 34431 . + . ID=Thaps34390.2;Parent=Thaps34390;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 34995 38349 . - . ID=Thaps34487;biotype=protein_coding;description=Cation transporting ATPasePredicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L0];external_name=Thaps34487;logic_name=jgi_thaps3 chr5 ensembl transcript 34995 38349 . - . ID=Thaps34487;Parent=Thaps34487;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 34995 36695 . - 0 ID=Thaps34487;Parent=Thaps34487;rank=4 chr5 . exon 34995 36695 . - . ID=Thaps34487.4;Parent=Thaps34487;constitutive=1;rank=4 chr5 . CDS 36882 37360 . - 0 ID=Thaps34487;Parent=Thaps34487;rank=3 chr5 . exon 36882 37360 . - . ID=Thaps34487.3;Parent=Thaps34487;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 37487 37534 . - 0 ID=Thaps34487;Parent=Thaps34487;rank=2 chr5 . exon 37487 37534 . - . ID=Thaps34487.2;Parent=Thaps34487;constitutive=1;rank=2 chr5 . CDS 37755 38349 . - 0 ID=Thaps34487;Parent=Thaps34487;rank=1 chr5 . exon 37755 38349 . - . ID=Thaps34487.1;Parent=Thaps34487;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 45583 46898 . - . ID=Thaps262367;biotype=protein_coding;description=Thylakoid lumen 15.0-kDa protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L2];external_name=Thaps262367;logic_name=jgi_thaps3 chr5 ensembl transcript 45583 46898 . - . ID=Thaps262367;Parent=Thaps262367;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 45583 45721 . - 0 ID=Thaps262367;Parent=Thaps262367;rank=4 chr5 . exon 45583 45721 . - . ID=Thaps262367.4;Parent=Thaps262367;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 45867 45956 . - 0 ID=Thaps262367;Parent=Thaps262367;rank=3 chr5 . exon 45867 45956 . - . ID=Thaps262367.3;Parent=Thaps262367;constitutive=1;rank=3 chr5 . CDS 46450 46528 . - 0 ID=Thaps262367;Parent=Thaps262367;rank=2 chr5 . exon 46450 46528 . - . ID=Thaps262367.2;Parent=Thaps262367;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 46627 46898 . - 0 ID=Thaps262367;Parent=Thaps262367;rank=1 chr5 . exon 46627 46898 . - . ID=Thaps262367.1;Parent=Thaps262367;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 39944 43298 . + . ID=Thaps34541;biotype=protein_coding;description=Cation transporting ATPasePredicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L0];external_name=Thaps34541;logic_name=jgi_thaps3 chr5 ensembl transcript 39944 43298 . + . ID=Thaps34541;Parent=Thaps34541;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 39944 40538 . + 0 ID=Thaps34541;Parent=Thaps34541;rank=1 chr5 . exon 39944 40538 . + . ID=Thaps34541.1;Parent=Thaps34541;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 40759 40806 . + 0 ID=Thaps34541;Parent=Thaps34541;rank=2 chr5 . exon 40759 40806 . + . ID=Thaps34541.2;Parent=Thaps34541;constitutive=1;rank=2 chr5 . CDS 40933 41411 . + 0 ID=Thaps34541;Parent=Thaps34541;rank=3 chr5 . exon 40933 41411 . + . ID=Thaps34541.3;Parent=Thaps34541;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 41598 43298 . + 0 ID=Thaps34541;Parent=Thaps34541;rank=4 chr5 . exon 41598 43298 . + . ID=Thaps34541.4;Parent=Thaps34541;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 44277 44708 . + . ID=Thaps4969;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L1];external_name=Thaps4969;logic_name=jgi_thaps3 chr5 ensembl transcript 44277 44708 . + . ID=Thaps4969;Parent=Thaps4969;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 44277 44708 . + 0 ID=Thaps4969;Parent=Thaps4969;rank=1 chr5 . exon 44277 44708 . + . ID=Thaps4969.1;Parent=Thaps4969;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 48417 51395 . - . ID=Thaps4971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L3];external_name=Thaps4971;logic_name=jgi_thaps3 chr5 ensembl transcript 48417 51395 . - . ID=Thaps4971;Parent=Thaps4971;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 48417 50705 . - 0 ID=Thaps4971;Parent=Thaps4971;rank=2 chr5 . exon 48417 50705 . - . ID=Thaps4971.2;Parent=Thaps4971;constitutive=1;rank=2 chr5 . CDS 50784 51395 . - 0 ID=Thaps4971;Parent=Thaps4971;rank=1 chr5 ensembl tRNA_gene 57029 57099 . + . ID=EPrTPOG00000000075;biotype=tRNA;description=tRNA-Gly for anticodon GCC [Source:TRNASCAN_SE%3BAcc:tRNA-Gly];external_name=tRNA-Gly;logic_name=ncrna_eg chr5 ensembl transcript 57029 57099 . + . ID=EPrTPOT00000000075;Parent=EPrTPOG00000000075;biotype=tRNA;logic_name=ncrna_eg chr5 . exon 57029 57099 . + . ID=EPrTPOE00000000075;Parent=EPrTPOT00000000075;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 57627 60523 . - . ID=Thaps268807;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase [Source:UniProtKB/TrEMBL%3BAcc:B8C1L6];external_name=RIR1_2;logic_name=jgi_thaps3 chr5 ensembl transcript 57627 60523 . - . ID=Thaps268807;Parent=Thaps268807;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 57627 57776 . - 0 ID=Thaps268807;Parent=Thaps268807;rank=6 chr5 . exon 57627 57776 . - . ID=Thaps268807.6;Parent=Thaps268807;constitutive=1;rank=6 chr5 . CDS 57861 58815 . - 0 ID=Thaps268807;Parent=Thaps268807;rank=5 chr5 . exon 57861 58815 . - . ID=Thaps268807.5;Parent=Thaps268807;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 58893 59509 . - 0 ID=Thaps268807;Parent=Thaps268807;rank=4 chr5 . exon 58893 59509 . - . ID=Thaps268807.4;Parent=Thaps268807;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 59599 59789 . - 0 ID=Thaps268807;Parent=Thaps268807;rank=3 chr5 . exon 59599 59789 . - . ID=Thaps268807.3;Parent=Thaps268807;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 59874 60345 . - 0 ID=Thaps268807;Parent=Thaps268807;rank=2 chr5 . exon 59874 60345 . - . ID=Thaps268807.2;Parent=Thaps268807;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 60473 60523 . - 0 ID=Thaps268807;Parent=Thaps268807;rank=1 chr5 . exon 50784 51395 . - . ID=Thaps4971.1;Parent=Thaps4971;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 52171 54400 . + . ID=Thaps4972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L4];external_name=Thaps4972;logic_name=jgi_thaps3 chr5 ensembl transcript 52171 54400 . + . ID=Thaps4972;Parent=Thaps4972;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 52171 53687 . + 0 ID=Thaps4972;Parent=Thaps4972;rank=1 chr5 . exon 52171 53687 . + . ID=Thaps4972.1;Parent=Thaps4972;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 53770 54400 . + 0 ID=Thaps4972;Parent=Thaps4972;rank=2 chr5 . exon 53770 54400 . + . ID=Thaps4972.2;Parent=Thaps4972;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 54515 56823 . - . ID=Thaps4973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L5];external_name=Thaps4973;logic_name=jgi_thaps3 chr5 ensembl transcript 54515 56823 . - . ID=Thaps4973;Parent=Thaps4973;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 54515 55840 . - 0 ID=Thaps4973;Parent=Thaps4973;rank=3 chr5 . exon 54515 55840 . - . ID=Thaps4973.3;Parent=Thaps4973;constitutive=1;rank=3 chr5 . CDS 55922 56360 . - 0 ID=Thaps4973;Parent=Thaps4973;rank=2 chr5 . exon 55922 56360 . - . ID=Thaps4973.2;Parent=Thaps4973;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 56690 56823 . - 0 ID=Thaps4973;Parent=Thaps4973;rank=1 chr5 . exon 56690 56823 . - . ID=Thaps4973.1;Parent=Thaps4973;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . repeat_region 60615 60645 . ? . description=trf chr5 . repeat_region 60624 60645 . ? . description=dust chr5 . repeat_region 67069 67106 . ? . description=dust chr5 ensembl protein_coding_gene 61521 62774 . - . ID=Thaps22517;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L7];external_name=Thaps22517;logic_name=jgi_thaps3 chr5 ensembl transcript 61521 62774 . - . ID=Thaps22517;Parent=Thaps22517;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 61521 62174 . - 0 ID=Thaps22517;Parent=Thaps22517;rank=2 chr5 . exon 61521 62174 . - . ID=Thaps22517.2;Parent=Thaps22517;constitutive=1;rank=2 chr5 . CDS 62295 62774 . - 0 ID=Thaps22517;Parent=Thaps22517;rank=1 chr5 . exon 62295 62774 . - . ID=Thaps22517.1;Parent=Thaps22517;constitutive=1;rank=1 chr5 . exon 60473 60523 . - . ID=Thaps268807.1;Parent=Thaps268807;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 65019 67174 . - . ID=Thaps34027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L9];external_name=Thaps34027;logic_name=jgi_thaps3 chr5 ensembl transcript 65019 67174 . - . ID=Thaps34027;Parent=Thaps34027;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 65019 65442 . - 0 ID=Thaps34027;Parent=Thaps34027;rank=6 chr5 . exon 65019 65442 . - . ID=Thaps34027.6;Parent=Thaps34027;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 65527 65571 . - 0 ID=Thaps34027;Parent=Thaps34027;rank=5 chr5 . exon 65527 65571 . - . ID=Thaps34027.5;Parent=Thaps34027;constitutive=1;rank=5 chr5 . CDS 65664 65763 . - 0 ID=Thaps34027;Parent=Thaps34027;rank=4 chr5 . exon 65664 65763 . - . ID=Thaps34027.4;Parent=Thaps34027;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 65869 66405 . - 0 ID=Thaps34027;Parent=Thaps34027;rank=3 chr5 . exon 65869 66405 . - . ID=Thaps34027.3;Parent=Thaps34027;constitutive=1;rank=3 chr5 . CDS 66481 66798 . - 0 ID=Thaps34027;Parent=Thaps34027;rank=2 chr5 . exon 66481 66798 . - . ID=Thaps34027.2;Parent=Thaps34027;constitutive=1;rank=2 chr5 . CDS 66832 67174 . - 0 ID=Thaps34027;Parent=Thaps34027;rank=1 chr5 . exon 66832 67174 . - . ID=Thaps34027.1;Parent=Thaps34027;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 63307 64786 . + . ID=Thaps4976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1L8];external_name=Thaps4976;logic_name=jgi_thaps3 chr5 ensembl transcript 63307 64786 . + . ID=Thaps4976;Parent=Thaps4976;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 63307 63498 . + 0 ID=Thaps4976;Parent=Thaps4976;rank=1 chr5 . exon 63307 63498 . + . ID=Thaps4976.1;Parent=Thaps4976;constitutive=1;rank=1 chr5 . CDS 63600 64639 . + 0 ID=Thaps4976;Parent=Thaps4976;rank=2 chr5 . exon 63600 64639 . + . ID=Thaps4976.2;Parent=Thaps4976;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 64768 64786 . + 0 ID=Thaps4976;Parent=Thaps4976;rank=3 chr5 . exon 64768 64786 . + . ID=Thaps4976.3;Parent=Thaps4976;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 67991 69898 . - . ID=Thaps4978;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1M0];external_name=Thaps4978;logic_name=jgi_thaps3 chr5 ensembl transcript 67991 69898 . - . ID=Thaps4978;Parent=Thaps4978;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 67991 69898 . - 0 ID=Thaps4978;Parent=Thaps4978;rank=1 chr5 . exon 67991 69898 . - . ID=Thaps4978.1;Parent=Thaps4978;constitutive=1;rank=1 chr5 ensembl tRNA_gene 70377 70447 . - . ID=EPrTPOG00000000094;biotype=tRNA;description=tRNA-Gly for anticodon GCC [Source:TRNASCAN_SE%3BAcc:tRNA-Gly];external_name=tRNA-Gly;logic_name=ncrna_eg chr5 ensembl transcript 70377 70447 . - . ID=EPrTPOT00000000094;Parent=EPrTPOG00000000094;biotype=tRNA;logic_name=ncrna_eg chr5 . exon 70377 70447 . - . ID=EPrTPOE00000000094;Parent=EPrTPOT00000000094;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 78235 80784 . - . ID=Thaps22520;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1M4];external_name=Thaps22520;logic_name=jgi_thaps3 chr5 ensembl transcript 78235 80784 . - . ID=Thaps22520;Parent=Thaps22520;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 78235 80141 . - 0 ID=Thaps22520;Parent=Thaps22520;rank=2 chr5 . exon 78235 80141 . - . ID=Thaps22520.2;Parent=Thaps22520;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 80259 80784 . - 0 ID=Thaps22520;Parent=Thaps22520;rank=1 chr5 ensembl protein_coding_gene 71666 75442 . + . ID=Thaps262371;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1M1];external_name=Thaps262371;logic_name=jgi_thaps3 chr5 ensembl transcript 71666 75442 . + . ID=Thaps262371;Parent=Thaps262371;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 71666 72158 . + 0 ID=Thaps262371;Parent=Thaps262371;rank=1 chr5 . exon 71666 72158 . + . ID=Thaps262371.1;Parent=Thaps262371;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 72207 72469 . + 0 ID=Thaps262371;Parent=Thaps262371;rank=2 chr5 . exon 72207 72469 . + . ID=Thaps262371.2;Parent=Thaps262371;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 72566 73265 . + 0 ID=Thaps262371;Parent=Thaps262371;rank=3 chr5 . exon 72566 73265 . + . ID=Thaps262371.3;Parent=Thaps262371;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 73308 73946 . + 0 ID=Thaps262371;Parent=Thaps262371;rank=4 chr5 . exon 73308 73946 . + . ID=Thaps262371.4;Parent=Thaps262371;constitutive=1;rank=4 chr5 . CDS 73977 74631 . + 0 ID=Thaps262371;Parent=Thaps262371;rank=5 chr5 . exon 73977 74631 . + . ID=Thaps262371.5;Parent=Thaps262371;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 74710 74824 . + 0 ID=Thaps262371;Parent=Thaps262371;rank=6 chr5 . exon 74710 74824 . + . ID=Thaps262371.6;Parent=Thaps262371;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 74915 75442 . + 0 ID=Thaps262371;Parent=Thaps262371;rank=7 chr5 . exon 74915 75442 . + . ID=Thaps262371.7;Parent=Thaps262371;constitutive=1;rank=7 chr5 ensembl protein_coding_gene 75540 76502 . - . ID=Thaps4980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1M2];external_name=Thaps4980;logic_name=jgi_thaps3 chr5 ensembl transcript 75540 76502 . - . ID=Thaps4980;Parent=Thaps4980;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 75540 76502 . - 0 ID=Thaps4980;Parent=Thaps4980;rank=1 chr5 . exon 75540 76502 . - . ID=Thaps4980.1;Parent=Thaps4980;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 77106 78050 . + . ID=Thaps4981;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1M3];external_name=Thaps4981;logic_name=jgi_thaps3 chr5 ensembl transcript 77106 78050 . + . ID=Thaps4981;Parent=Thaps4981;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 77106 78050 . + 0 ID=Thaps4981;Parent=Thaps4981;rank=1 chr5 . exon 77106 78050 . + . ID=Thaps4981.1;Parent=Thaps4981;constitutive=1;rank=1 chr5 . repeat_region 83465 83479 . ? . description=dust chr5 . exon 80259 80784 . - . ID=Thaps22520.1;Parent=Thaps22520;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 81375 83316 . - . ID=Thaps22521;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1M5];external_name=Thaps22521;logic_name=jgi_thaps3 chr5 ensembl transcript 81375 83316 . - . ID=Thaps22521;Parent=Thaps22521;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 81375 81884 . - 0 ID=Thaps22521;Parent=Thaps22521;rank=2 chr5 . exon 81375 81884 . - . ID=Thaps22521.2;Parent=Thaps22521;constitutive=1;rank=2 chr5 . CDS 81964 83316 . - 0 ID=Thaps22521;Parent=Thaps22521;rank=1 chr5 . exon 81964 83316 . - . ID=Thaps22521.1;Parent=Thaps22521;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 84310 85683 . - . ID=Thaps22522;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1M6];external_name=Thaps22522;logic_name=jgi_thaps3 chr5 ensembl transcript 84310 85683 . - . ID=Thaps22522;Parent=Thaps22522;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 84310 84828 . - 0 ID=Thaps22522;Parent=Thaps22522;rank=3 chr5 . exon 84310 84828 . - . ID=Thaps22522.3;Parent=Thaps22522;constitutive=1;rank=3 chr5 . CDS 85091 85581 . - 0 ID=Thaps22522;Parent=Thaps22522;rank=2 chr5 . exon 85091 85581 . - . ID=Thaps22522.2;Parent=Thaps22522;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 85626 85683 . - 0 ID=Thaps22522;Parent=Thaps22522;rank=1 chr5 . exon 85626 85683 . - . ID=Thaps22522.1;Parent=Thaps22522;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 87502 89034 . - . ID=Thaps22524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1M8];external_name=Thaps22524;logic_name=jgi_thaps3 chr5 ensembl transcript 87502 89034 . - . ID=Thaps22524;Parent=Thaps22524;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 87502 89034 . - 0 ID=Thaps22524;Parent=Thaps22524;rank=1 chr5 . exon 87502 89034 . - . ID=Thaps22524.1;Parent=Thaps22524;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 89630 90683 . + . ID=Thaps28148;biotype=protein_coding;description=Nitrilase [Source:UniProtKB/TrEMBL%3BAcc:B8C1M9];external_name=NIT2;logic_name=jgi_thaps3 chr5 ensembl transcript 89630 90683 . + . ID=Thaps28148;Parent=Thaps28148;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 89630 90180 . + 0 ID=Thaps28148;Parent=Thaps28148;rank=1 chr5 . exon 89630 90180 . + . ID=Thaps28148.1;Parent=Thaps28148;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 90272 90683 . + 0 ID=Thaps28148;Parent=Thaps28148;rank=2 chr5 ensembl protein_coding_gene 86421 87341 . + . ID=Thaps4985;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1M7];external_name=Thaps4985;logic_name=jgi_thaps3 chr5 ensembl transcript 86421 87341 . + . ID=Thaps4985;Parent=Thaps4985;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 86421 86981 . + 0 ID=Thaps4985;Parent=Thaps4985;rank=1 chr5 . exon 86421 86981 . + . ID=Thaps4985.1;Parent=Thaps4985;constitutive=1;rank=1 chr5 . CDS 87081 87341 . + 0 ID=Thaps4985;Parent=Thaps4985;rank=2 chr5 . exon 87081 87341 . + . ID=Thaps4985.2;Parent=Thaps4985;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 92380 97379 . - . ID=Thaps22526;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C1N1];external_name=Thaps22526;logic_name=jgi_thaps3 chr5 ensembl transcript 92380 97379 . - . ID=Thaps22526;Parent=Thaps22526;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 92380 92958 . - 0 ID=Thaps22526;Parent=Thaps22526;rank=9 chr5 . exon 92380 92958 . - . ID=Thaps22526.9;Parent=Thaps22526;constitutive=1;rank=9 chr5 . CDS 93032 93480 . - 0 ID=Thaps22526;Parent=Thaps22526;rank=8 chr5 . exon 93032 93480 . - . ID=Thaps22526.8;Parent=Thaps22526;constitutive=1;ensembl_end_phase=2;rank=8 chr5 . CDS 93568 94067 . - 0 ID=Thaps22526;Parent=Thaps22526;rank=7 chr5 . exon 93568 94067 . - . ID=Thaps22526.7;Parent=Thaps22526;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 94151 94236 . - 0 ID=Thaps22526;Parent=Thaps22526;rank=6 chr5 . exon 94151 94236 . - . ID=Thaps22526.6;Parent=Thaps22526;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 94320 94552 . - 0 ID=Thaps22526;Parent=Thaps22526;rank=5 chr5 . exon 94320 94552 . - . ID=Thaps22526.5;Parent=Thaps22526;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 94629 96470 . - 0 ID=Thaps22526;Parent=Thaps22526;rank=4 chr5 . exon 94629 96470 . - . ID=Thaps22526.4;Parent=Thaps22526;constitutive=1;rank=4 chr5 . CDS 96660 96871 . - 0 ID=Thaps22526;Parent=Thaps22526;rank=3 chr5 . exon 96660 96871 . - . ID=Thaps22526.3;Parent=Thaps22526;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 96955 96977 . - 0 ID=Thaps22526;Parent=Thaps22526;rank=2 chr5 . exon 96955 96977 . - . ID=Thaps22526.2;Parent=Thaps22526;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 97074 97379 . - 0 ID=Thaps22526;Parent=Thaps22526;rank=1 chr5 . exon 97074 97379 . - . ID=Thaps22526.1;Parent=Thaps22526;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 98528 100015 . - . ID=Thaps22527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1N2];external_name=Thaps22527;logic_name=jgi_thaps3 chr5 ensembl transcript 98528 100015 . - . ID=Thaps22527;Parent=Thaps22527;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 98528 99213 . - 0 ID=Thaps22527;Parent=Thaps22527;rank=2 chr5 . exon 98528 99213 . - . ID=Thaps22527.2;Parent=Thaps22527;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 99646 100015 . - 0 ID=Thaps22527;Parent=Thaps22527;rank=1 chr5 . exon 99646 100015 . - . ID=Thaps22527.1;Parent=Thaps22527;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . exon 90272 90683 . + . ID=Thaps28148.2;Parent=Thaps28148;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 90968 92004 . - . ID=Thaps34399;biotype=protein_coding;description=5%2C 10-methylenetetrahydrofolate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C1N0];external_name=Thaps34399;logic_name=jgi_thaps3 chr5 ensembl transcript 90968 92004 . - . ID=Thaps34399;Parent=Thaps34399;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 90968 91558 . - 0 ID=Thaps34399;Parent=Thaps34399;rank=2 chr5 . exon 90968 91558 . - . ID=Thaps34399.2;Parent=Thaps34399;constitutive=1;rank=2 chr5 . CDS 91645 92004 . - 0 ID=Thaps34399;Parent=Thaps34399;rank=1 chr5 . exon 91645 92004 . - . ID=Thaps34399.1;Parent=Thaps34399;constitutive=1;rank=1 chr5 . repeat_region 102480 102546 . ? . description=trf chr5 . repeat_region 102542 102561 . ? . description=trf chr5 . repeat_region 102542 102561 . ? . description=dust chr5 . repeat_region 102678 102701 . ? . description=trf chr5 . repeat_region 102678 102701 . ? . description=dust chr5 . repeat_region 104732 104778 . ? . description=trf chr5 ensembl protein_coding_gene 108975 109835 . + . ID=Thaps34097;biotype=protein_coding;description=Carbamate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C1N4];external_name=ARCC;logic_name=jgi_thaps3 chr5 ensembl transcript 108975 109835 . + . ID=Thaps34097;Parent=Thaps34097;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 108975 109835 . + 0 ID=Thaps34097;Parent=Thaps34097;rank=1 chr5 . exon 108975 109835 . + . ID=Thaps34097.1;Parent=Thaps34097;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 100341 101349 . + . ID=Thaps4991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1N3];external_name=Thaps4991;logic_name=jgi_thaps3 chr5 ensembl transcript 100341 101349 . + . ID=Thaps4991;Parent=Thaps4991;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 100341 100570 . + 0 ID=Thaps4991;Parent=Thaps4991;rank=1 chr5 . exon 100341 100570 . + . ID=Thaps4991.1;Parent=Thaps4991;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 100641 101349 . + 0 ID=Thaps4991;Parent=Thaps4991;rank=2 chr5 . exon 100641 101349 . + . ID=Thaps4991.2;Parent=Thaps4991;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 117493 119719 . - . ID=Thaps22530;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1N6];external_name=Thaps22530;logic_name=jgi_thaps3 chr5 ensembl transcript 117493 119719 . - . ID=Thaps22530;Parent=Thaps22530;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 117493 118271 . - 0 ID=Thaps22530;Parent=Thaps22530;rank=2 chr5 . exon 117493 118271 . - . ID=Thaps22530.2;Parent=Thaps22530;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 118294 119719 . - 0 ID=Thaps22530;Parent=Thaps22530;rank=1 chr5 . exon 118294 119719 . - . ID=Thaps22530.1;Parent=Thaps22530;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 114611 117418 . + . ID=Thaps268812;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1N5];external_name=Thaps268812;logic_name=jgi_thaps3 chr5 ensembl transcript 114611 117418 . + . ID=Thaps268812;Parent=Thaps268812;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 114611 114730 . + 0 ID=Thaps268812;Parent=Thaps268812;rank=1 chr5 . exon 114611 114730 . + . ID=Thaps268812.1;Parent=Thaps268812;constitutive=1;rank=1 chr5 . CDS 114842 115053 . + 0 ID=Thaps268812;Parent=Thaps268812;rank=2 chr5 . exon 114842 115053 . + . ID=Thaps268812.2;Parent=Thaps268812;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 115137 115388 . + 0 ID=Thaps268812;Parent=Thaps268812;rank=3 chr5 . exon 115137 115388 . + . ID=Thaps268812.3;Parent=Thaps268812;constitutive=1;rank=3 chr5 . CDS 115466 115896 . + 0 ID=Thaps268812;Parent=Thaps268812;rank=4 chr5 . exon 115466 115896 . + . ID=Thaps268812.4;Parent=Thaps268812;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 115985 116496 . + 0 ID=Thaps268812;Parent=Thaps268812;rank=5 chr5 . exon 115985 116496 . + . ID=Thaps268812.5;Parent=Thaps268812;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 116570 117418 . + 0 ID=Thaps268812;Parent=Thaps268812;rank=6 chr5 . exon 116570 117418 . + . ID=Thaps268812.6;Parent=Thaps268812;constitutive=1;rank=6 chr5 . repeat_region 124701 124728 . ? . description=dust chr5 . repeat_region 124930 125001 . + . description=MuDR1_TP chr5 . repeat_region 127554 127587 . ? . description=dust chr5 . repeat_region 127555 127587 . ? . description=trf chr5 . repeat_region 128583 128645 . ? . description=trf chr5 ensembl protein_coding_gene 122022 122736 . - . ID=Thaps22531;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1N7];external_name=Thaps22531;logic_name=jgi_thaps3 chr5 ensembl transcript 122022 122736 . - . ID=Thaps22531;Parent=Thaps22531;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 122022 122092 . - 0 ID=Thaps22531;Parent=Thaps22531;rank=2 chr5 . exon 122022 122092 . - . ID=Thaps22531.2;Parent=Thaps22531;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 122184 122736 . - 0 ID=Thaps22531;Parent=Thaps22531;rank=1 chr5 . exon 122184 122736 . - . ID=Thaps22531.1;Parent=Thaps22531;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 129418 135440 . + . ID=Thaps22533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1P0];external_name=Thaps22533;logic_name=jgi_thaps3 chr5 ensembl transcript 129418 135440 . + . ID=Thaps22533;Parent=Thaps22533;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 129418 130780 . + 0 ID=Thaps22533;Parent=Thaps22533;rank=1 chr5 . exon 129418 130780 . + . ID=Thaps22533.1;Parent=Thaps22533;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 130802 131756 . + 0 ID=Thaps22533;Parent=Thaps22533;rank=2 chr5 . CDS 131831 132188 . + 0 ID=Thaps22533;Parent=Thaps22533;rank=3 chr5 . CDS 132236 132696 . + 0 ID=Thaps22533;Parent=Thaps22533;rank=4 chr5 . CDS 132772 133175 . + 0 ID=Thaps22533;Parent=Thaps22533;rank=5 chr5 . CDS 133253 133388 . + 0 ID=Thaps22533;Parent=Thaps22533;rank=6 chr5 . CDS 133530 133839 . + 0 ID=Thaps22533;Parent=Thaps22533;rank=7 chr5 . CDS 133905 135440 . + 0 ID=Thaps22533;Parent=Thaps22533;rank=8 chr5 ensembl protein_coding_gene 127808 128651 . + . ID=Thaps40580;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1N9];external_name=Thaps40580;logic_name=jgi_thaps3 chr5 ensembl transcript 127808 128651 . + . ID=Thaps40580;Parent=Thaps40580;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 127808 127923 . + 0 ID=Thaps40580;Parent=Thaps40580;rank=1 chr5 . exon 127808 127923 . + . ID=Thaps40580.1;Parent=Thaps40580;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 128075 128165 . + 0 ID=Thaps40580;Parent=Thaps40580;rank=2 chr5 . exon 128075 128165 . + . ID=Thaps40580.2;Parent=Thaps40580;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 128283 128651 . + 0 ID=Thaps40580;Parent=Thaps40580;rank=3 chr5 . exon 128283 128651 . + . ID=Thaps40580.3;Parent=Thaps40580;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 125566 127422 . - . ID=Thaps4997;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1N8];external_name=Thaps4997;logic_name=jgi_thaps3 chr5 ensembl transcript 125566 127422 . - . ID=Thaps4997;Parent=Thaps4997;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 125566 127422 . - 0 ID=Thaps4997;Parent=Thaps4997;rank=1 chr5 . exon 125566 127422 . - . ID=Thaps4997.1;Parent=Thaps4997;constitutive=1;rank=1 chr5 . exon 130802 131756 . + . ID=Thaps22533.2;Parent=Thaps22533;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 131831 132188 . + . ID=Thaps22533.3;Parent=Thaps22533;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . exon 132236 132696 . + . ID=Thaps22533.4;Parent=Thaps22533;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . exon 132772 133175 . + . ID=Thaps22533.5;Parent=Thaps22533;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . exon 133253 133388 . + . ID=Thaps22533.6;Parent=Thaps22533;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . exon 133530 133839 . + . ID=Thaps22533.7;Parent=Thaps22533;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . exon 133905 135440 . + . ID=Thaps22533.8;Parent=Thaps22533;constitutive=1;rank=8 chr5 ensembl protein_coding_gene 136058 137974 . - . ID=Thaps262378;biotype=protein_coding;description=Putative uncharacterized protein FRU1 [Source:UniProtKB/TrEMBL%3BAcc:B8C1P1];external_name=FRU1;logic_name=jgi_thaps3 chr5 ensembl transcript 136058 137974 . - . ID=Thaps262378;Parent=Thaps262378;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 136058 136314 . - 0 ID=Thaps262378;Parent=Thaps262378;rank=5 chr5 . exon 136058 136314 . - . ID=Thaps262378.5;Parent=Thaps262378;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 136408 136825 . - 0 ID=Thaps262378;Parent=Thaps262378;rank=4 chr5 . exon 136408 136825 . - . ID=Thaps262378.4;Parent=Thaps262378;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 137273 137303 . - 0 ID=Thaps262378;Parent=Thaps262378;rank=3 chr5 . exon 137273 137303 . - . ID=Thaps262378.3;Parent=Thaps262378;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 137370 137691 . - 0 ID=Thaps262378;Parent=Thaps262378;rank=2 chr5 . exon 137370 137691 . - . ID=Thaps262378.2;Parent=Thaps262378;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 137812 137974 . - 0 ID=Thaps262378;Parent=Thaps262378;rank=1 chr5 . exon 137812 137974 . - . ID=Thaps262378.1;Parent=Thaps262378;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 140066 140113 . ? . description=trf chr5 . repeat_region 141471 141495 . ? . description=trf chr5 . repeat_region 148687 148730 . ? . description=dust chr5 . repeat_region 148877 148917 . ? . description=dust chr5 . repeat_region 148880 148917 . ? . description=trf chr5 . repeat_region 148880 148917 . ? . description=trf chr5 . repeat_region 148880 148917 . ? . description=trf chr5 . repeat_region 149566 149618 . + . description=Harbinger2N_TP chr5 . repeat_region 149577 149618 . ? . description=dust chr5 ensembl protein_coding_gene 144656 150332 . - . ID=Thaps5001;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1P2];external_name=Thaps5001;logic_name=jgi_thaps3 chr5 ensembl transcript 144656 150332 . - . ID=Thaps5001;Parent=Thaps5001;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 144656 146084 . - 0 ID=Thaps5001;Parent=Thaps5001;rank=6 chr5 . exon 144656 146084 . - . ID=Thaps5001.6;Parent=Thaps5001;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 146175 146299 . - 0 ID=Thaps5001;Parent=Thaps5001;rank=5 chr5 . exon 146175 146299 . - . ID=Thaps5001.5;Parent=Thaps5001;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 146534 146854 . - 0 ID=Thaps5001;Parent=Thaps5001;rank=4 chr5 . exon 146534 146854 . - . ID=Thaps5001.4;Parent=Thaps5001;constitutive=1;rank=4 chr5 . CDS 146979 147337 . - 0 ID=Thaps5001;Parent=Thaps5001;rank=3 chr5 . exon 146979 147337 . - . ID=Thaps5001.3;Parent=Thaps5001;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 147455 149547 . - 0 ID=Thaps5001;Parent=Thaps5001;rank=2 chr5 . exon 147455 149547 . - . ID=Thaps5001.2;Parent=Thaps5001;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 149698 150332 . - 0 ID=Thaps5001;Parent=Thaps5001;rank=1 chr5 . exon 149698 150332 . - . ID=Thaps5001.1;Parent=Thaps5001;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . biological_region 150827 150830 0.999 + . logic_name=eponine chr5 ensembl protein_coding_gene 150987 151720 . + . ID=Thaps22535;biotype=protein_coding;description=RS11%2C ribosomal protein 11 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C1P3];external_name=RS11;logic_name=jgi_thaps3 chr5 ensembl transcript 150987 151720 . + . ID=Thaps22535;Parent=Thaps22535;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 150987 151023 . + 0 ID=Thaps22535;Parent=Thaps22535;rank=1 chr5 . exon 150987 151023 . + . ID=Thaps22535.1;Parent=Thaps22535;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 151260 151720 . + 0 ID=Thaps22535;Parent=Thaps22535;rank=2 chr5 . exon 151260 151720 . + . ID=Thaps22535.2;Parent=Thaps22535;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 153623 154115 . + . ID=Thaps262381;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1P5];external_name=Thaps262381;logic_name=jgi_thaps3 chr5 ensembl transcript 153623 154115 . + . ID=Thaps262381;Parent=Thaps262381;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 153623 153707 . + 0 ID=Thaps262381;Parent=Thaps262381;rank=1 chr5 . exon 153623 153707 . + . ID=Thaps262381.1;Parent=Thaps262381;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 153874 153987 . + 0 ID=Thaps262381;Parent=Thaps262381;rank=2 chr5 . exon 153874 153987 . + . ID=Thaps262381.2;Parent=Thaps262381;constitutive=1;rank=2 chr5 . CDS 154088 154115 . + 0 ID=Thaps262381;Parent=Thaps262381;rank=3 chr5 . exon 154088 154115 . + . ID=Thaps262381.3;Parent=Thaps262381;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 155040 156857 . - . ID=Thaps40586;biotype=protein_coding;description=Gdp-d-mannose 4%2C6-dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8C1P6];external_name=GMD1;logic_name=jgi_thaps3 chr5 ensembl transcript 155040 156857 . - . ID=Thaps40586;Parent=Thaps40586;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 155040 155819 . - 0 ID=Thaps40586;Parent=Thaps40586;rank=3 chr5 . exon 155040 155819 . - . ID=Thaps40586.3;Parent=Thaps40586;constitutive=1;rank=3 chr5 . CDS 155934 156149 . - 0 ID=Thaps40586;Parent=Thaps40586;rank=2 chr5 . exon 155934 156149 . - . ID=Thaps40586.2;Parent=Thaps40586;constitutive=1;rank=2 chr5 . CDS 156768 156857 . - 0 ID=Thaps40586;Parent=Thaps40586;rank=1 chr5 . exon 156768 156857 . - . ID=Thaps40586.1;Parent=Thaps40586;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 152197 152837 . - . ID=Thaps5004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1P4];external_name=Thaps5004;logic_name=jgi_thaps3 chr5 ensembl transcript 152197 152837 . - . ID=Thaps5004;Parent=Thaps5004;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 152197 152225 . - 0 ID=Thaps5004;Parent=Thaps5004;rank=3 chr5 . exon 152197 152225 . - . ID=Thaps5004.3;Parent=Thaps5004;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 152350 152362 . - 0 ID=Thaps5004;Parent=Thaps5004;rank=2 chr5 . exon 152350 152362 . - . ID=Thaps5004.2;Parent=Thaps5004;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 152517 152837 . - 0 ID=Thaps5004;Parent=Thaps5004;rank=1 chr5 . exon 152517 152837 . - . ID=Thaps5004.1;Parent=Thaps5004;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 157541 159839 . - . ID=Thaps5007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1P7];external_name=Thaps5007;logic_name=jgi_thaps3 chr5 ensembl transcript 157541 159839 . - . ID=Thaps5007;Parent=Thaps5007;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 157541 158960 . - 0 ID=Thaps5007;Parent=Thaps5007;rank=2 chr5 . exon 157541 158960 . - . ID=Thaps5007.2;Parent=Thaps5007;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 159052 159839 . - 0 ID=Thaps5007;Parent=Thaps5007;rank=1 chr5 . exon 159052 159839 . - . ID=Thaps5007.1;Parent=Thaps5007;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . repeat_region 168065 168096 . ? . description=trf chr5 . repeat_region 168069 168101 . ? . description=trf chr5 ensembl protein_coding_gene 167298 168355 . - . ID=Thaps268816;biotype=protein_coding;description=RPB5%2C-like protein to RNA polymerase i [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q1];external_name=RPB5;logic_name=jgi_thaps3 chr5 ensembl transcript 167298 168355 . - . ID=Thaps268816;Parent=Thaps268816;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 167298 167498 . - 0 ID=Thaps268816;Parent=Thaps268816;rank=3 chr5 . exon 167298 167498 . - . ID=Thaps268816.3;Parent=Thaps268816;constitutive=1;rank=3 chr5 . CDS 167628 167873 . - 0 ID=Thaps268816;Parent=Thaps268816;rank=2 chr5 . exon 167628 167873 . - . ID=Thaps268816.2;Parent=Thaps268816;constitutive=1;rank=2 chr5 . CDS 168122 168355 . - 0 ID=Thaps268816;Parent=Thaps268816;rank=1 chr5 . exon 168122 168355 . - . ID=Thaps268816.1;Parent=Thaps268816;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 168622 169905 . + . ID=Thaps268817;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q2];external_name=Thaps268817;logic_name=jgi_thaps3 chr5 ensembl transcript 168622 169905 . + . ID=Thaps268817;Parent=Thaps268817;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 168622 168894 . + 0 ID=Thaps268817;Parent=Thaps268817;rank=1 chr5 . exon 168622 168894 . + . ID=Thaps268817.1;Parent=Thaps268817;constitutive=1;rank=1 chr5 . CDS 168987 169328 . + 0 ID=Thaps268817;Parent=Thaps268817;rank=2 chr5 . exon 168987 169328 . + . ID=Thaps268817.2;Parent=Thaps268817;constitutive=1;rank=2 chr5 . CDS 169429 169680 . + 0 ID=Thaps268817;Parent=Thaps268817;rank=3 chr5 . exon 169429 169680 . + . ID=Thaps268817.3;Parent=Thaps268817;constitutive=1;rank=3 chr5 . CDS 169777 169905 . + 0 ID=Thaps268817;Parent=Thaps268817;rank=4 chr5 ensembl protein_coding_gene 161540 163042 . - . ID=Thaps5008;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1P8];external_name=Thaps5008;logic_name=jgi_thaps3 chr5 ensembl transcript 161540 163042 . - . ID=Thaps5008;Parent=Thaps5008;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 161540 163042 . - 0 ID=Thaps5008;Parent=Thaps5008;rank=1 chr5 . exon 161540 163042 . - . ID=Thaps5008.1;Parent=Thaps5008;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 163791 164906 . + . ID=Thaps5009;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1P9];external_name=Thaps5009;logic_name=jgi_thaps3 chr5 ensembl transcript 163791 164906 . + . ID=Thaps5009;Parent=Thaps5009;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 163791 164906 . + 0 ID=Thaps5009;Parent=Thaps5009;rank=1 chr5 . exon 163791 164906 . + . ID=Thaps5009.1;Parent=Thaps5009;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 165194 167049 . - . ID=Thaps5010;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q0];external_name=Thaps5010;logic_name=jgi_thaps3 chr5 ensembl transcript 165194 167049 . - . ID=Thaps5010;Parent=Thaps5010;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 165194 166318 . - 0 ID=Thaps5010;Parent=Thaps5010;rank=2 chr5 . exon 165194 166318 . - . ID=Thaps5010.2;Parent=Thaps5010;constitutive=1;rank=2 chr5 . CDS 166420 167049 . - 0 ID=Thaps5010;Parent=Thaps5010;rank=1 chr5 . exon 166420 167049 . - . ID=Thaps5010.1;Parent=Thaps5010;constitutive=1;rank=1 chr5 . biological_region 175729 175731 0.999 - . logic_name=eponine chr5 ensembl protein_coding_gene 172445 173176 . - . ID=Thaps17854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q5];external_name=Thaps17854;logic_name=jgi_thaps3 chr5 ensembl transcript 172445 173176 . - . ID=Thaps17854;Parent=Thaps17854;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 172445 172579 . - 0 ID=Thaps17854;Parent=Thaps17854;rank=2 chr5 . exon 172445 172579 . - . ID=Thaps17854.2;Parent=Thaps17854;constitutive=1;rank=2 chr5 . CDS 172691 173176 . - 0 ID=Thaps17854;Parent=Thaps17854;rank=1 chr5 . exon 172691 173176 . - . ID=Thaps17854.1;Parent=Thaps17854;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 171343 171965 . - . ID=Thaps19622;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q4];external_name=Thaps19622;logic_name=jgi_thaps3 chr5 ensembl transcript 171343 171965 . - . ID=Thaps19622;Parent=Thaps19622;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 171343 171432 . - 0 ID=Thaps19622;Parent=Thaps19622;rank=3 chr5 . exon 171343 171432 . - . ID=Thaps19622.3;Parent=Thaps19622;constitutive=1;rank=3 chr5 . CDS 171540 171665 . - 0 ID=Thaps19622;Parent=Thaps19622;rank=2 chr5 . exon 171540 171665 . - . ID=Thaps19622.2;Parent=Thaps19622;constitutive=1;rank=2 chr5 . CDS 171786 171965 . - 0 ID=Thaps19622;Parent=Thaps19622;rank=1 chr5 . exon 171786 171965 . - . ID=Thaps19622.1;Parent=Thaps19622;constitutive=1;rank=1 chr5 . exon 169777 169905 . + . ID=Thaps268817.4;Parent=Thaps268817;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 175045 175947 . - . ID=Thaps34293;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q6];external_name=Thaps34293;logic_name=jgi_thaps3 chr5 ensembl transcript 175045 175947 . - . ID=Thaps34293;Parent=Thaps34293;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 175045 175947 . - 0 ID=Thaps34293;Parent=Thaps34293;rank=1 chr5 . exon 175045 175947 . - . ID=Thaps34293.1;Parent=Thaps34293;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 170141 170647 . - . ID=Thaps5013;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q3];external_name=Thaps5013;logic_name=jgi_thaps3 chr5 ensembl transcript 170141 170647 . - . ID=Thaps5013;Parent=Thaps5013;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 170141 170647 . - 0 ID=Thaps5013;Parent=Thaps5013;rank=1 chr5 . exon 170141 170647 . - . ID=Thaps5013.1;Parent=Thaps5013;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 176414 178045 . + . ID=Thaps5017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q7];external_name=Thaps5017;logic_name=jgi_thaps3 chr5 ensembl transcript 176414 178045 . + . ID=Thaps5017;Parent=Thaps5017;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 176414 178045 . + 0 ID=Thaps5017;Parent=Thaps5017;rank=1 chr5 . exon 176414 178045 . + . ID=Thaps5017.1;Parent=Thaps5017;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 178972 180615 . + . ID=Thaps5018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q8];external_name=Thaps5018;logic_name=jgi_thaps3 chr5 ensembl transcript 178972 180615 . + . ID=Thaps5018;Parent=Thaps5018;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 178972 180078 . + 0 ID=Thaps5018;Parent=Thaps5018;rank=1 chr5 . exon 178972 180078 . + . ID=Thaps5018.1;Parent=Thaps5018;constitutive=1;rank=1 chr5 . CDS 180178 180615 . + 0 ID=Thaps5018;Parent=Thaps5018;rank=2 chr5 . repeat_region 188343 188406 . ? . description=dust chr5 ensembl protein_coding_gene 184904 186235 . - . ID=Thaps15027;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1R0];external_name=Thaps15027;logic_name=jgi_thaps3 chr5 ensembl transcript 184904 186235 . - . ID=Thaps15027;Parent=Thaps15027;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 184904 185401 . - 0 ID=Thaps15027;Parent=Thaps15027;rank=2 chr5 . exon 184904 185401 . - . ID=Thaps15027.2;Parent=Thaps15027;constitutive=1;rank=2 chr5 . CDS 185483 186235 . - 0 ID=Thaps15027;Parent=Thaps15027;rank=1 chr5 . exon 185483 186235 . - . ID=Thaps15027.1;Parent=Thaps15027;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 182603 183397 . + . ID=Thaps34100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Q9];external_name=Thaps34100;logic_name=jgi_thaps3 chr5 ensembl transcript 182603 183397 . + . ID=Thaps34100;Parent=Thaps34100;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 182603 182754 . + 0 ID=Thaps34100;Parent=Thaps34100;rank=1 chr5 . exon 182603 182754 . + . ID=Thaps34100.1;Parent=Thaps34100;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 182833 183397 . + 0 ID=Thaps34100;Parent=Thaps34100;rank=2 chr5 . exon 182833 183397 . + . ID=Thaps34100.2;Parent=Thaps34100;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 180178 180615 . + . ID=Thaps5018.2;Parent=Thaps5018;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 187813 189560 . + . ID=Thaps5021;biotype=protein_coding;description=3-oxoacyl-[acyl-carrier-protein] synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C1R1];external_name=Thaps5021;logic_name=jgi_thaps3 chr5 ensembl transcript 187813 189560 . + . ID=Thaps5021;Parent=Thaps5021;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 187813 188337 . + 0 ID=Thaps5021;Parent=Thaps5021;rank=1 chr5 . exon 187813 188337 . + . ID=Thaps5021.1;Parent=Thaps5021;constitutive=1;rank=1 chr5 . CDS 188688 189560 . + 0 ID=Thaps5021;Parent=Thaps5021;rank=2 chr5 . exon 188688 189560 . + . ID=Thaps5021.2;Parent=Thaps5021;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 189982 190982 . - . ID=Thaps17008;biotype=protein_coding;description=Ribonuclease [Source:UniProtKB/TrEMBL%3BAcc:B8C1R2];external_name=Thaps17008;logic_name=jgi_thaps3 chr5 ensembl transcript 189982 190982 . - . ID=Thaps17008;Parent=Thaps17008;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 189982 190274 . - 0 ID=Thaps17008;Parent=Thaps17008;rank=3 chr5 . exon 189982 190274 . - . ID=Thaps17008.3;Parent=Thaps17008;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 190395 190528 . - 0 ID=Thaps17008;Parent=Thaps17008;rank=2 chr5 . exon 190395 190528 . - . ID=Thaps17008.2;Parent=Thaps17008;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 190663 190982 . - 0 ID=Thaps17008;Parent=Thaps17008;rank=1 chr5 . exon 190663 190982 . - . ID=Thaps17008.1;Parent=Thaps17008;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 196281 197958 . + . ID=Thaps22544;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1R5];external_name=Thaps22544;logic_name=jgi_thaps3 chr5 ensembl transcript 196281 197958 . + . ID=Thaps22544;Parent=Thaps22544;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 196281 196439 . + 0 ID=Thaps22544;Parent=Thaps22544;rank=1 chr5 . exon 196281 196439 . + . ID=Thaps22544.1;Parent=Thaps22544;constitutive=1;rank=1 chr5 . CDS 196588 197958 . + 0 ID=Thaps22544;Parent=Thaps22544;rank=2 chr5 . exon 196588 197958 . + . ID=Thaps22544.2;Parent=Thaps22544;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 191584 193303 . - . ID=Thaps25960;biotype=protein_coding;description=Phenylalanyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C1R3];external_name=Thaps25960;logic_name=jgi_thaps3 chr5 ensembl transcript 191584 193303 . - . ID=Thaps25960;Parent=Thaps25960;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 191584 192636 . - 0 ID=Thaps25960;Parent=Thaps25960;rank=2 chr5 . exon 191584 192636 . - . ID=Thaps25960.2;Parent=Thaps25960;constitutive=1;rank=2 chr5 . CDS 192836 193303 . - 0 ID=Thaps25960;Parent=Thaps25960;rank=1 chr5 . exon 192836 193303 . - . ID=Thaps25960.1;Parent=Thaps25960;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 193775 195749 . + . ID=Thaps40597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1R4];external_name=Thaps40597;logic_name=jgi_thaps3 chr5 ensembl transcript 193775 195749 . + . ID=Thaps40597;Parent=Thaps40597;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 193775 193904 . + 0 ID=Thaps40597;Parent=Thaps40597;rank=1 chr5 . exon 193775 193904 . + . ID=Thaps40597.1;Parent=Thaps40597;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 194076 194131 . + 0 ID=Thaps40597;Parent=Thaps40597;rank=2 chr5 . exon 194076 194131 . + . ID=Thaps40597.2;Parent=Thaps40597;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 194183 194853 . + 0 ID=Thaps40597;Parent=Thaps40597;rank=3 chr5 . exon 194183 194853 . + . ID=Thaps40597.3;Parent=Thaps40597;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 194942 195749 . + 0 ID=Thaps40597;Parent=Thaps40597;rank=4 chr5 . exon 194942 195749 . + . ID=Thaps40597.4;Parent=Thaps40597;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 198351 199316 . - . ID=Thaps5026;biotype=protein_coding;description=ATP synthase gamma chain [Source:UniProtKB/TrEMBL%3BAcc:B8C1R6];external_name=Thaps5026;logic_name=jgi_thaps3 chr5 ensembl transcript 198351 199316 . - . ID=Thaps5026;Parent=Thaps5026;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 198351 199180 . - 0 ID=Thaps5026;Parent=Thaps5026;rank=2 chr5 . exon 198351 199180 . - . ID=Thaps5026.2;Parent=Thaps5026;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 199298 199316 . - 0 ID=Thaps5026;Parent=Thaps5026;rank=1 chr5 . exon 199298 199316 . - . ID=Thaps5026.1;Parent=Thaps5026;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 201362 204500 . + . ID=Thaps34543;biotype=protein_coding;description=Phospoenolpyruvate carboxylase [Source:UniProtKB/TrEMBL%3BAcc:B8C1R7];external_name=PPC2;logic_name=jgi_thaps3 chr5 ensembl transcript 201362 204500 . + . ID=Thaps34543;Parent=Thaps34543;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 201362 201728 . + 0 ID=Thaps34543;Parent=Thaps34543;rank=1 chr5 . exon 201362 201728 . + . ID=Thaps34543.1;Parent=Thaps34543;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 201840 201963 . + 0 ID=Thaps34543;Parent=Thaps34543;rank=2 chr5 . exon 201840 201963 . + . ID=Thaps34543.2;Parent=Thaps34543;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 202051 202516 . + 0 ID=Thaps34543;Parent=Thaps34543;rank=3 chr5 . exon 202051 202516 . + . ID=Thaps34543.3;Parent=Thaps34543;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 202568 202801 . + 0 ID=Thaps34543;Parent=Thaps34543;rank=4 chr5 . exon 202568 202801 . + . ID=Thaps34543.4;Parent=Thaps34543;constitutive=1;rank=4 chr5 . CDS 202902 203707 . + 0 ID=Thaps34543;Parent=Thaps34543;rank=5 chr5 . exon 202902 203707 . + . ID=Thaps34543.5;Parent=Thaps34543;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 203811 203866 . + 0 ID=Thaps34543;Parent=Thaps34543;rank=6 chr5 . exon 203811 203866 . + . ID=Thaps34543.6;Parent=Thaps34543;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 203961 204116 . + 0 ID=Thaps34543;Parent=Thaps34543;rank=7 chr5 . exon 203961 204116 . + . ID=Thaps34543.7;Parent=Thaps34543;constitutive=1;rank=7 chr5 . CDS 204181 204500 . + 0 ID=Thaps34543;Parent=Thaps34543;rank=8 chr5 . exon 204181 204500 . + . ID=Thaps34543.8;Parent=Thaps34543;constitutive=1;ensembl_end_phase=2;rank=8 chr5 ensembl protein_coding_gene 208397 209322 . - . ID=Thaps34551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1R9];external_name=Thaps34551;logic_name=jgi_thaps3 chr5 ensembl transcript 208397 209322 . - . ID=Thaps34551;Parent=Thaps34551;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 208397 208939 . - 0 ID=Thaps34551;Parent=Thaps34551;rank=2 chr5 . exon 208397 208939 . - . ID=Thaps34551.2;Parent=Thaps34551;constitutive=1;rank=2 chr5 . CDS 209062 209322 . - 0 ID=Thaps34551;Parent=Thaps34551;rank=1 chr5 . exon 209062 209322 . - . ID=Thaps34551.1;Parent=Thaps34551;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 204782 207536 . - . ID=Thaps5028;biotype=protein_coding;description=Predicted proteinPutative RNA-dependent RNA polymerase 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C1R8];external_name=Thaps5028;logic_name=jgi_thaps3 chr5 ensembl transcript 204782 207536 . - . ID=Thaps5028;Parent=Thaps5028;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 204782 206995 . - 0 ID=Thaps5028;Parent=Thaps5028;rank=2 chr5 . exon 204782 206995 . - . ID=Thaps5028.2;Parent=Thaps5028;constitutive=1;rank=2 chr5 . CDS 207093 207536 . - 0 ID=Thaps5028;Parent=Thaps5028;rank=1 chr5 . exon 207093 207536 . - . ID=Thaps5028.1;Parent=Thaps5028;constitutive=1;rank=1 chr5 . repeat_region 212941 212949 . ? . description=dust chr5 . repeat_region 215001 215008 . ? . description=dust chr5 ensembl tRNA_gene 214334 214414 . - . ID=EPrTPOG00000000088;biotype=tRNA;description=tRNA-Ser for anticodon GCU [Source:TRNASCAN_SE%3BAcc:tRNA-Ser];external_name=tRNA-Ser;logic_name=ncrna_eg chr5 ensembl transcript 214334 214414 . - . ID=EPrTPOT00000000088;Parent=EPrTPOG00000000088;biotype=tRNA;logic_name=ncrna_eg chr5 . exon 214334 214414 . - . ID=EPrTPOE00000000088;Parent=EPrTPOT00000000088;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 210159 211544 . + . ID=Thaps22547;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1S0];external_name=Thaps22547;logic_name=jgi_thaps3 chr5 ensembl transcript 210159 211544 . + . ID=Thaps22547;Parent=Thaps22547;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 210159 210449 . + 0 ID=Thaps22547;Parent=Thaps22547;rank=1 chr5 . exon 210159 210449 . + . ID=Thaps22547.1;Parent=Thaps22547;constitutive=1;rank=1 chr5 . CDS 210686 210769 . + 0 ID=Thaps22547;Parent=Thaps22547;rank=2 chr5 . exon 210686 210769 . + . ID=Thaps22547.2;Parent=Thaps22547;constitutive=1;rank=2 chr5 . CDS 210886 211134 . + 0 ID=Thaps22547;Parent=Thaps22547;rank=3 chr5 . exon 210886 211134 . + . ID=Thaps22547.3;Parent=Thaps22547;constitutive=1;rank=3 chr5 . CDS 211254 211544 . + 0 ID=Thaps22547;Parent=Thaps22547;rank=4 chr5 . exon 211254 211544 . + . ID=Thaps22547.4;Parent=Thaps22547;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 214653 216566 . + . ID=Thaps22548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1S3];external_name=Thaps22548;logic_name=jgi_thaps3 chr5 ensembl transcript 214653 216566 . + . ID=Thaps22548;Parent=Thaps22548;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 214653 216566 . + 0 ID=Thaps22548;Parent=Thaps22548;rank=1 chr5 . exon 214653 216566 . + . ID=Thaps22548.1;Parent=Thaps22548;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 211767 212533 . - . ID=Thaps262395;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1S1];external_name=Thaps262395;logic_name=jgi_thaps3 chr5 ensembl transcript 211767 212533 . - . ID=Thaps262395;Parent=Thaps262395;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 211767 212533 . - 0 ID=Thaps262395;Parent=Thaps262395;rank=1 chr5 . exon 211767 212533 . - . ID=Thaps262395.1;Parent=Thaps262395;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 213510 214123 . + . ID=Thaps262396;biotype=protein_coding;description=Bilin:ferredoxin oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8C1S2];external_name=Thaps262396;logic_name=jgi_thaps3 chr5 ensembl transcript 213510 214123 . + . ID=Thaps262396;Parent=Thaps262396;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 213510 213955 . + 0 ID=Thaps262396;Parent=Thaps262396;rank=1 chr5 . exon 213510 213955 . + . ID=Thaps262396.1;Parent=Thaps262396;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 213989 214123 . + 0 ID=Thaps262396;Parent=Thaps262396;rank=2 chr5 . exon 213989 214123 . + . ID=Thaps262396.2;Parent=Thaps262396;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 216638 218074 . - . ID=Thaps5034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1S4];external_name=Thaps5034;logic_name=jgi_thaps3 chr5 ensembl transcript 216638 218074 . - . ID=Thaps5034;Parent=Thaps5034;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 216638 217188 . - 0 ID=Thaps5034;Parent=Thaps5034;rank=3 chr5 . exon 216638 217188 . - . ID=Thaps5034.3;Parent=Thaps5034;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 217275 217699 . - 0 ID=Thaps5034;Parent=Thaps5034;rank=2 chr5 . exon 217275 217699 . - . ID=Thaps5034.2;Parent=Thaps5034;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 217791 218074 . - 0 ID=Thaps5034;Parent=Thaps5034;rank=1 chr5 . exon 217791 218074 . - . ID=Thaps5034.1;Parent=Thaps5034;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 218936 219535 . + . ID=Thaps5035;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1S5];external_name=Thaps5035;logic_name=jgi_thaps3 chr5 ensembl transcript 218936 219535 . + . ID=Thaps5035;Parent=Thaps5035;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 218936 219535 . + 0 ID=Thaps5035;Parent=Thaps5035;rank=1 chr5 . exon 218936 219535 . + . ID=Thaps5035.1;Parent=Thaps5035;constitutive=1;rank=1 chr5 . repeat_region 226750 226770 . ? . description=trf chr5 . repeat_region 227903 227923 . ? . description=trf chr5 ensembl protein_coding_gene 220021 221033 . - . ID=Thaps17312;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1S6];external_name=Thaps17312;logic_name=jgi_thaps3 chr5 ensembl transcript 220021 221033 . - . ID=Thaps17312;Parent=Thaps17312;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 220021 220262 . - 0 ID=Thaps17312;Parent=Thaps17312;rank=3 chr5 . exon 220021 220262 . - . ID=Thaps17312.3;Parent=Thaps17312;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 220356 220836 . - 0 ID=Thaps17312;Parent=Thaps17312;rank=2 chr5 . exon 220356 220836 . - . ID=Thaps17312.2;Parent=Thaps17312;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 220989 221033 . - 0 ID=Thaps17312;Parent=Thaps17312;rank=1 chr5 . exon 220989 221033 . - . ID=Thaps17312.1;Parent=Thaps17312;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 223315 228636 . - . ID=Thaps22549;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1S8];external_name=Thaps22549;logic_name=jgi_thaps3 chr5 ensembl transcript 223315 228636 . - . ID=Thaps22549;Parent=Thaps22549;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 223315 224904 . - 0 ID=Thaps22549;Parent=Thaps22549;rank=5 chr5 . exon 223315 224904 . - . ID=Thaps22549.5;Parent=Thaps22549;constitutive=1;rank=5 chr5 . CDS 224969 225556 . - 0 ID=Thaps22549;Parent=Thaps22549;rank=4 chr5 . exon 224969 225556 . - . ID=Thaps22549.4;Parent=Thaps22549;constitutive=1;rank=4 chr5 . CDS 225628 226476 . - 0 ID=Thaps22549;Parent=Thaps22549;rank=3 chr5 . exon 225628 226476 . - . ID=Thaps22549.3;Parent=Thaps22549;constitutive=1;rank=3 chr5 . CDS 226785 227900 . - 0 ID=Thaps22549;Parent=Thaps22549;rank=2 chr5 . exon 226785 227900 . - . ID=Thaps22549.2;Parent=Thaps22549;constitutive=1;rank=2 chr5 . CDS 227980 228636 . - 0 ID=Thaps22549;Parent=Thaps22549;rank=1 chr5 . exon 227980 228636 . - . ID=Thaps22549.1;Parent=Thaps22549;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 221258 223266 . + . ID=Thaps5036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1S7];external_name=Thaps5036;logic_name=jgi_thaps3 chr5 ensembl transcript 221258 223266 . + . ID=Thaps5036;Parent=Thaps5036;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 221258 221406 . + 0 ID=Thaps5036;Parent=Thaps5036;rank=1 chr5 . exon 221258 221406 . + . ID=Thaps5036.1;Parent=Thaps5036;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 221767 222448 . + 0 ID=Thaps5036;Parent=Thaps5036;rank=2 chr5 . exon 221767 222448 . + . ID=Thaps5036.2;Parent=Thaps5036;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 222693 222752 . + 0 ID=Thaps5036;Parent=Thaps5036;rank=3 chr5 . exon 222693 222752 . + . ID=Thaps5036.3;Parent=Thaps5036;constitutive=1;rank=3 chr5 . CDS 222832 223266 . + 0 ID=Thaps5036;Parent=Thaps5036;rank=4 chr5 . exon 222832 223266 . + . ID=Thaps5036.4;Parent=Thaps5036;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 228993 230891 . + . ID=Thaps5038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1S9];external_name=Thaps5038;logic_name=jgi_thaps3 chr5 ensembl transcript 228993 230891 . + . ID=Thaps5038;Parent=Thaps5038;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 228993 230891 . + 0 ID=Thaps5038;Parent=Thaps5038;rank=1 chr5 . exon 228993 230891 . + . ID=Thaps5038.1;Parent=Thaps5038;constitutive=1;rank=1 chr5 . biological_region 232580 232585 0.999 + . logic_name=eponine chr5 . repeat_region 238475 238536 . ? . description=dust chr5 ensembl protein_coding_gene 235148 237206 . - . ID=Thaps13326;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T3];external_name=Thaps13326;logic_name=jgi_thaps3 chr5 ensembl transcript 235148 237206 . - . ID=Thaps13326;Parent=Thaps13326;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 235148 235811 . - 0 ID=Thaps13326;Parent=Thaps13326;rank=5 chr5 . exon 235148 235811 . - . ID=Thaps13326.5;Parent=Thaps13326;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 235894 235969 . - 0 ID=Thaps13326;Parent=Thaps13326;rank=4 chr5 . exon 235894 235969 . - . ID=Thaps13326.4;Parent=Thaps13326;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 236084 236652 . - 0 ID=Thaps13326;Parent=Thaps13326;rank=3 chr5 . exon 236084 236652 . - . ID=Thaps13326.3;Parent=Thaps13326;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 236722 236837 . - 0 ID=Thaps13326;Parent=Thaps13326;rank=2 chr5 . exon 236722 236837 . - . ID=Thaps13326.2;Parent=Thaps13326;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 236892 237206 . - 0 ID=Thaps13326;Parent=Thaps13326;rank=1 chr5 . exon 236892 237206 . - . ID=Thaps13326.1;Parent=Thaps13326;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 232465 234930 . + . ID=Thaps22551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T2];external_name=Thaps22551;logic_name=jgi_thaps3 chr5 ensembl transcript 232465 234930 . + . ID=Thaps22551;Parent=Thaps22551;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 232465 232717 . + 0 ID=Thaps22551;Parent=Thaps22551;rank=1 chr5 . exon 232465 232717 . + . ID=Thaps22551.1;Parent=Thaps22551;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 232819 232985 . + 0 ID=Thaps22551;Parent=Thaps22551;rank=2 chr5 . exon 232819 232985 . + . ID=Thaps22551.2;Parent=Thaps22551;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 233080 233733 . + 0 ID=Thaps22551;Parent=Thaps22551;rank=3 chr5 . exon 233080 233733 . + . ID=Thaps22551.3;Parent=Thaps22551;constitutive=1;rank=3 chr5 . CDS 233823 233964 . + 0 ID=Thaps22551;Parent=Thaps22551;rank=4 chr5 . exon 233823 233964 . + . ID=Thaps22551.4;Parent=Thaps22551;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 234049 234470 . + 0 ID=Thaps22551;Parent=Thaps22551;rank=5 chr5 . exon 234049 234470 . + . ID=Thaps22551.5;Parent=Thaps22551;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 234556 234930 . + 0 ID=Thaps22551;Parent=Thaps22551;rank=6 chr5 . exon 234556 234930 . + . ID=Thaps22551.6;Parent=Thaps22551;constitutive=1;rank=6 chr5 ensembl protein_coding_gene 239459 240732 . + . ID=Thaps268822;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T4];external_name=Thaps268822;logic_name=jgi_thaps3 chr5 ensembl transcript 239459 240732 . + . ID=Thaps268822;Parent=Thaps268822;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 239459 239564 . + 0 ID=Thaps268822;Parent=Thaps268822;rank=1 chr5 . exon 239459 239564 . + . ID=Thaps268822.1;Parent=Thaps268822;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 239654 239703 . + 0 ID=Thaps268822;Parent=Thaps268822;rank=2 chr5 . CDS 239737 240732 . + 0 ID=Thaps268822;Parent=Thaps268822;rank=3 chr5 ensembl protein_coding_gene 230918 231508 . - . ID=Thaps34197;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T0];external_name=Thaps34197;logic_name=jgi_thaps3 chr5 ensembl transcript 230918 231508 . - . ID=Thaps34197;Parent=Thaps34197;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 230918 231186 . - 0 ID=Thaps34197;Parent=Thaps34197;rank=2 chr5 . exon 230918 231186 . - . ID=Thaps34197.2;Parent=Thaps34197;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 231379 231508 . - 0 ID=Thaps34197;Parent=Thaps34197;rank=1 chr5 . exon 231379 231508 . - . ID=Thaps34197.1;Parent=Thaps34197;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 231627 232080 . - . ID=Thaps5039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T1];external_name=Thaps5039;logic_name=jgi_thaps3 chr5 ensembl transcript 231627 232080 . - . ID=Thaps5039;Parent=Thaps5039;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 231627 231670 . - 0 ID=Thaps5039;Parent=Thaps5039;rank=2 chr5 . exon 231627 231670 . - . ID=Thaps5039.2;Parent=Thaps5039;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 231726 232080 . - 0 ID=Thaps5039;Parent=Thaps5039;rank=1 chr5 . exon 231726 232080 . - . ID=Thaps5039.1;Parent=Thaps5039;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 243347 243721 . ? . description=trf chr5 ensembl protein_coding_gene 242810 244804 . + . ID=Thaps22554;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T6];external_name=Thaps22554;logic_name=jgi_thaps3 chr5 ensembl transcript 242810 244804 . + . ID=Thaps22554;Parent=Thaps22554;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 242810 244804 . + 0 ID=Thaps22554;Parent=Thaps22554;rank=1 chr5 . exon 242810 244804 . + . ID=Thaps22554.1;Parent=Thaps22554;constitutive=1;rank=1 chr5 . exon 239654 239703 . + . ID=Thaps268822.2;Parent=Thaps268822;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 239737 240732 . + . ID=Thaps268822.3;Parent=Thaps268822;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 249170 250849 . - . ID=Thaps268823;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C1U0];external_name=Thaps268823;logic_name=jgi_thaps3 chr5 ensembl transcript 249170 250849 . - . ID=Thaps268823;Parent=Thaps268823;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 249170 249621 . - 0 ID=Thaps268823;Parent=Thaps268823;rank=3 chr5 . exon 249170 249621 . - . ID=Thaps268823.3;Parent=Thaps268823;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 249853 250516 . - 0 ID=Thaps268823;Parent=Thaps268823;rank=2 chr5 . CDS 250553 250849 . - 0 ID=Thaps268823;Parent=Thaps268823;rank=1 chr5 ensembl protein_coding_gene 240967 242436 . - . ID=Thaps5043;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T5];external_name=Thaps5043;logic_name=jgi_thaps3 chr5 ensembl transcript 240967 242436 . - . ID=Thaps5043;Parent=Thaps5043;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 240967 241412 . - 0 ID=Thaps5043;Parent=Thaps5043;rank=3 chr5 . exon 240967 241412 . - . ID=Thaps5043.3;Parent=Thaps5043;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 241465 241522 . - 0 ID=Thaps5043;Parent=Thaps5043;rank=2 chr5 . exon 241465 241522 . - . ID=Thaps5043.2;Parent=Thaps5043;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 241723 242436 . - 0 ID=Thaps5043;Parent=Thaps5043;rank=1 chr5 . exon 241723 242436 . - . ID=Thaps5043.1;Parent=Thaps5043;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 244990 246309 . + . ID=Thaps5045;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T7];external_name=Thaps5045;logic_name=jgi_thaps3 chr5 ensembl transcript 244990 246309 . + . ID=Thaps5045;Parent=Thaps5045;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 244990 246309 . + 0 ID=Thaps5045;Parent=Thaps5045;rank=1 chr5 . exon 244990 246309 . + . ID=Thaps5045.1;Parent=Thaps5045;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 246432 247655 . - . ID=Thaps5046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T8];external_name=Thaps5046;logic_name=jgi_thaps3 chr5 ensembl transcript 246432 247655 . - . ID=Thaps5046;Parent=Thaps5046;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 246432 247655 . - 0 ID=Thaps5046;Parent=Thaps5046;rank=1 chr5 . exon 246432 247655 . - . ID=Thaps5046.1;Parent=Thaps5046;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 248211 248999 . + . ID=Thaps5047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1T9];external_name=Thaps5047;logic_name=jgi_thaps3 chr5 ensembl transcript 248211 248999 . + . ID=Thaps5047;Parent=Thaps5047;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 248211 248999 . + 0 ID=Thaps5047;Parent=Thaps5047;rank=1 chr5 . exon 248211 248999 . + . ID=Thaps5047.1;Parent=Thaps5047;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 258840 259982 . - . ID=Thaps262400;biotype=protein_coding;description=Inversion protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1U3];external_name=Thaps262400;logic_name=jgi_thaps3 chr5 ensembl transcript 258840 259982 . - . ID=Thaps262400;Parent=Thaps262400;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 258840 259157 . - 0 ID=Thaps262400;Parent=Thaps262400;rank=3 chr5 . exon 258840 259157 . - . ID=Thaps262400.3;Parent=Thaps262400;constitutive=1;rank=3 chr5 . CDS 259226 259471 . - 0 ID=Thaps262400;Parent=Thaps262400;rank=2 chr5 . exon 259226 259471 . - . ID=Thaps262400.2;Parent=Thaps262400;constitutive=1;rank=2 chr5 . CDS 259616 259982 . - 0 ID=Thaps262400;Parent=Thaps262400;rank=1 chr5 . exon 249853 250516 . - . ID=Thaps268823.2;Parent=Thaps268823;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 250553 250849 . - . ID=Thaps268823.1;Parent=Thaps268823;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 251517 251837 . + . ID=Thaps34211;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1U1];external_name=Thaps34211;logic_name=jgi_thaps3 chr5 ensembl transcript 251517 251837 . + . ID=Thaps34211;Parent=Thaps34211;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 251517 251837 . + 0 ID=Thaps34211;Parent=Thaps34211;rank=1 chr5 . exon 251517 251837 . + . ID=Thaps34211.1;Parent=Thaps34211;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 255723 258194 . + . ID=Thaps5051;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1U2];external_name=Thaps5051;logic_name=jgi_thaps3 chr5 ensembl transcript 255723 258194 . + . ID=Thaps5051;Parent=Thaps5051;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 255723 258194 . + 0 ID=Thaps5051;Parent=Thaps5051;rank=1 chr5 . exon 255723 258194 . + . ID=Thaps5051.1;Parent=Thaps5051;constitutive=1;rank=1 chr5 . repeat_region 266588 266632 . ? . description=dust chr5 ensembl protein_coding_gene 266717 268921 . + . ID=Thaps22559;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1U6];external_name=Thaps22559;logic_name=jgi_thaps3 chr5 ensembl transcript 266717 268921 . + . ID=Thaps22559;Parent=Thaps22559;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 266717 268921 . + 0 ID=Thaps22559;Parent=Thaps22559;rank=1 chr5 . exon 266717 268921 . + . ID=Thaps22559.1;Parent=Thaps22559;constitutive=1;rank=1 chr5 . exon 259616 259982 . - . ID=Thaps262400.1;Parent=Thaps262400;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 264655 265881 . - . ID=Thaps28185;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1U5];external_name=Thaps28185;logic_name=jgi_thaps3 chr5 ensembl transcript 264655 265881 . - . ID=Thaps28185;Parent=Thaps28185;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 264655 265881 . - 0 ID=Thaps28185;Parent=Thaps28185;rank=1 chr5 . exon 264655 265881 . - . ID=Thaps28185.1;Parent=Thaps28185;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 262068 262946 . + . ID=Thaps5053;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1U4];external_name=Thaps5053;logic_name=jgi_thaps3 chr5 ensembl transcript 262068 262946 . + . ID=Thaps5053;Parent=Thaps5053;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 262068 262946 . + 0 ID=Thaps5053;Parent=Thaps5053;rank=1 chr5 . exon 262068 262946 . + . ID=Thaps5053.1;Parent=Thaps5053;constitutive=1;rank=1 chr5 . repeat_region 274652 274685 . ? . description=trf chr5 ensembl protein_coding_gene 272504 273751 . - . ID=Thaps13920;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1U8];external_name=Thaps13920;logic_name=jgi_thaps3 chr5 ensembl transcript 272504 273751 . - . ID=Thaps13920;Parent=Thaps13920;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 272504 273366 . - 0 ID=Thaps13920;Parent=Thaps13920;rank=3 chr5 . exon 272504 273366 . - . ID=Thaps13920.3;Parent=Thaps13920;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 273430 273477 . - 0 ID=Thaps13920;Parent=Thaps13920;rank=2 chr5 . exon 273430 273477 . - . ID=Thaps13920.2;Parent=Thaps13920;constitutive=1;rank=2 chr5 . CDS 273562 273751 . - 0 ID=Thaps13920;Parent=Thaps13920;rank=1 chr5 . exon 273562 273751 . - . ID=Thaps13920.1;Parent=Thaps13920;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 269670 271064 . + . ID=Thaps22560;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1U7];external_name=Thaps22560;logic_name=jgi_thaps3 chr5 ensembl transcript 269670 271064 . + . ID=Thaps22560;Parent=Thaps22560;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 269670 271064 . + 0 ID=Thaps22560;Parent=Thaps22560;rank=1 chr5 . exon 269670 271064 . + . ID=Thaps22560.1;Parent=Thaps22560;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 274572 277694 . + . ID=Thaps268825;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1U9];external_name=Thaps268825;logic_name=jgi_thaps3 chr5 ensembl transcript 274572 277694 . + . ID=Thaps268825;Parent=Thaps268825;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 274572 274620 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=1 chr5 . exon 274572 274620 . + . ID=Thaps268825.1;Parent=Thaps268825;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 274702 274806 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=2 chr5 . exon 274702 274806 . + . ID=Thaps268825.2;Parent=Thaps268825;constitutive=1;rank=2 chr5 . CDS 275053 275176 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=3 chr5 . exon 275053 275176 . + . ID=Thaps268825.3;Parent=Thaps268825;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 275321 275415 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=4 chr5 . exon 275321 275415 . + . ID=Thaps268825.4;Parent=Thaps268825;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 275530 275757 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=5 chr5 . exon 275530 275757 . + . ID=Thaps268825.5;Parent=Thaps268825;constitutive=1;rank=5 chr5 . CDS 275869 276003 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=6 chr5 . exon 275869 276003 . + . ID=Thaps268825.6;Parent=Thaps268825;constitutive=1;rank=6 chr5 . CDS 276042 276067 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=7 chr5 . exon 276042 276067 . + . ID=Thaps268825.7;Parent=Thaps268825;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 276192 276511 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=8 chr5 . exon 276192 276511 . + . ID=Thaps268825.8;Parent=Thaps268825;constitutive=1;ensembl_end_phase=2;rank=8 chr5 . CDS 276560 277268 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=9 chr5 . exon 276560 277268 . + . ID=Thaps268825.9;Parent=Thaps268825;constitutive=1;ensembl_end_phase=1;rank=9 chr5 . CDS 277335 277694 . + 0 ID=Thaps268825;Parent=Thaps268825;rank=10 chr5 . exon 277335 277694 . + . ID=Thaps268825.10;Parent=Thaps268825;constitutive=1;rank=10 chr5 ensembl protein_coding_gene 277760 280029 . - . ID=Thaps28189;biotype=protein_coding;description=Heat shock protein%2C HSP70%2C hsc70 [Source:UniProtKB/TrEMBL%3BAcc:B8C1V0];external_name=HSP70_3;logic_name=jgi_thaps3 chr5 ensembl transcript 277760 280029 . - . ID=Thaps28189;Parent=Thaps28189;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 277760 278254 . - 0 ID=Thaps28189;Parent=Thaps28189;rank=4 chr5 . exon 277760 278254 . - . ID=Thaps28189.4;Parent=Thaps28189;constitutive=1;rank=4 chr5 . CDS 278340 278992 . - 0 ID=Thaps28189;Parent=Thaps28189;rank=3 chr5 . exon 278340 278992 . - . ID=Thaps28189.3;Parent=Thaps28189;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 279084 279738 . - 0 ID=Thaps28189;Parent=Thaps28189;rank=2 chr5 . exon 279084 279738 . - . ID=Thaps28189.2;Parent=Thaps28189;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 279958 280029 . - 0 ID=Thaps28189;Parent=Thaps28189;rank=1 chr5 . repeat_region 284148 284155 . ? . description=dust chr5 . repeat_region 289308 289315 . ? . description=dust chr5 ensembl protein_coding_gene 281892 283911 . - . ID=Thaps22565;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1V2];external_name=Thaps22565;logic_name=jgi_thaps3 chr5 ensembl transcript 281892 283911 . - . ID=Thaps22565;Parent=Thaps22565;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 281892 282192 . - 0 ID=Thaps22565;Parent=Thaps22565;rank=4 chr5 . exon 281892 282192 . - . ID=Thaps22565.4;Parent=Thaps22565;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 282274 282955 . - 0 ID=Thaps22565;Parent=Thaps22565;rank=3 chr5 . exon 282274 282955 . - . ID=Thaps22565.3;Parent=Thaps22565;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 283039 283400 . - 0 ID=Thaps22565;Parent=Thaps22565;rank=2 chr5 . exon 283039 283400 . - . ID=Thaps22565.2;Parent=Thaps22565;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 283820 283911 . - 0 ID=Thaps22565;Parent=Thaps22565;rank=1 chr5 . exon 283820 283911 . - . ID=Thaps22565.1;Parent=Thaps22565;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 284203 285634 . + . ID=Thaps22566;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1V3];external_name=Thaps22566;logic_name=jgi_thaps3 chr5 ensembl transcript 284203 285634 . + . ID=Thaps22566;Parent=Thaps22566;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 284203 284842 . + 0 ID=Thaps22566;Parent=Thaps22566;rank=1 chr5 . exon 284203 284842 . + . ID=Thaps22566.1;Parent=Thaps22566;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 285030 285634 . + 0 ID=Thaps22566;Parent=Thaps22566;rank=2 chr5 . exon 285030 285634 . + . ID=Thaps22566.2;Parent=Thaps22566;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 279958 280029 . - . ID=Thaps28189.1;Parent=Thaps28189;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 288699 288944 . - . ID=Thaps34186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1V5];external_name=Thaps34186;logic_name=jgi_thaps3 chr5 ensembl transcript 288699 288944 . - . ID=Thaps34186;Parent=Thaps34186;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 288699 288944 . - 0 ID=Thaps34186;Parent=Thaps34186;rank=1 chr5 . exon 288699 288944 . - . ID=Thaps34186.1;Parent=Thaps34186;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 280384 281291 . + . ID=Thaps5063;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1V1];external_name=Thaps5063;logic_name=jgi_thaps3 chr5 ensembl transcript 280384 281291 . + . ID=Thaps5063;Parent=Thaps5063;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 280384 280584 . + 0 ID=Thaps5063;Parent=Thaps5063;rank=1 chr5 . exon 280384 280584 . + . ID=Thaps5063.1;Parent=Thaps5063;constitutive=1;rank=1 chr5 . CDS 280863 281291 . + 0 ID=Thaps5063;Parent=Thaps5063;rank=2 chr5 . exon 280863 281291 . + . ID=Thaps5063.2;Parent=Thaps5063;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 285837 288352 . + . ID=Thaps5066;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1V4];external_name=Thaps5066;logic_name=jgi_thaps3 chr5 ensembl transcript 285837 288352 . + . ID=Thaps5066;Parent=Thaps5066;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 285837 287362 . + 0 ID=Thaps5066;Parent=Thaps5066;rank=1 chr5 . exon 285837 287362 . + . ID=Thaps5066.1;Parent=Thaps5066;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 287443 288352 . + 0 ID=Thaps5066;Parent=Thaps5066;rank=2 chr5 . exon 287443 288352 . + . ID=Thaps5066.2;Parent=Thaps5066;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 292069 297504 . - . ID=Thaps22568;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1V7];external_name=Thaps22568;logic_name=jgi_thaps3 chr5 ensembl transcript 292069 297504 . - . ID=Thaps22568;Parent=Thaps22568;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 292069 294078 . - 0 ID=Thaps22568;Parent=Thaps22568;rank=3 chr5 . exon 292069 294078 . - . ID=Thaps22568.3;Parent=Thaps22568;constitutive=1;rank=3 chr5 . CDS 294153 294617 . - 0 ID=Thaps22568;Parent=Thaps22568;rank=2 chr5 . exon 294153 294617 . - . ID=Thaps22568.2;Parent=Thaps22568;constitutive=1;rank=2 chr5 . CDS 294694 297504 . - 0 ID=Thaps22568;Parent=Thaps22568;rank=1 chr5 . exon 294694 297504 . - . ID=Thaps22568.1;Parent=Thaps22568;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 290229 291803 . + . ID=Thaps34006;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1V6];external_name=Thaps34006;logic_name=jgi_thaps3 chr5 ensembl transcript 290229 291803 . + . ID=Thaps34006;Parent=Thaps34006;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 290229 291411 . + 0 ID=Thaps34006;Parent=Thaps34006;rank=1 chr5 . exon 290229 291411 . + . ID=Thaps34006.1;Parent=Thaps34006;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 291505 291803 . + 0 ID=Thaps34006;Parent=Thaps34006;rank=2 chr5 . exon 291505 291803 . + . ID=Thaps34006.2;Parent=Thaps34006;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 298404 299519 . + . ID=Thaps34176;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1V8];external_name=Thaps34176;logic_name=jgi_thaps3 chr5 ensembl transcript 298404 299519 . + . ID=Thaps34176;Parent=Thaps34176;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 298404 298741 . + 0 ID=Thaps34176;Parent=Thaps34176;rank=1 chr5 . exon 298404 298741 . + . ID=Thaps34176.1;Parent=Thaps34176;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 298814 298876 . + 0 ID=Thaps34176;Parent=Thaps34176;rank=2 chr5 . exon 298814 298876 . + . ID=Thaps34176.2;Parent=Thaps34176;constitutive=1;rank=2 chr5 . CDS 298967 299235 . + 0 ID=Thaps34176;Parent=Thaps34176;rank=3 chr5 . exon 298967 299235 . + . ID=Thaps34176.3;Parent=Thaps34176;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 299356 299519 . + 0 ID=Thaps34176;Parent=Thaps34176;rank=4 chr5 . exon 299356 299519 . + . ID=Thaps34176.4;Parent=Thaps34176;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . repeat_region 301963 301986 . ? . description=dust chr5 . repeat_region 301963 301998 . ? . description=trf chr5 . repeat_region 302055 302094 . ? . description=trf chr5 ensembl protein_coding_gene 300788 302353 . + . ID=Thaps22570;biotype=protein_coding;description=Putative uncharacterized protein HSF10 [Source:UniProtKB/TrEMBL%3BAcc:B8C1V9];external_name=HSF10;logic_name=jgi_thaps3 chr5 ensembl transcript 300788 302353 . + . ID=Thaps22570;Parent=Thaps22570;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 300788 301106 . + 0 ID=Thaps22570;Parent=Thaps22570;rank=1 chr5 . exon 300788 301106 . + . ID=Thaps22570.1;Parent=Thaps22570;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 301240 301430 . + 0 ID=Thaps22570;Parent=Thaps22570;rank=2 chr5 . exon 301240 301430 . + . ID=Thaps22570.2;Parent=Thaps22570;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 301613 302353 . + 0 ID=Thaps22570;Parent=Thaps22570;rank=3 chr5 . exon 301613 302353 . + . ID=Thaps22570.3;Parent=Thaps22570;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 302708 303541 . + . ID=Thaps22571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1W0];external_name=Thaps22571;logic_name=jgi_thaps3 chr5 ensembl transcript 302708 303541 . + . ID=Thaps22571;Parent=Thaps22571;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 302708 303014 . + 0 ID=Thaps22571;Parent=Thaps22571;rank=1 chr5 . exon 302708 303014 . + . ID=Thaps22571.1;Parent=Thaps22571;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 303066 303541 . + 0 ID=Thaps22571;Parent=Thaps22571;rank=2 chr5 . exon 303066 303541 . + . ID=Thaps22571.2;Parent=Thaps22571;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 305642 307675 . - . ID=Thaps22573;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1W2];external_name=Thaps22573;logic_name=jgi_thaps3 chr5 ensembl transcript 305642 307675 . - . ID=Thaps22573;Parent=Thaps22573;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 305642 305721 . - 0 ID=Thaps22573;Parent=Thaps22573;rank=2 chr5 . exon 305642 305721 . - . ID=Thaps22573.2;Parent=Thaps22573;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 305803 307675 . - 0 ID=Thaps22573;Parent=Thaps22573;rank=1 chr5 . exon 305803 307675 . - . ID=Thaps22573.1;Parent=Thaps22573;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 304744 305298 . - . ID=Thaps28199;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8C1W1];external_name=Thaps28199;logic_name=jgi_thaps3 chr5 ensembl transcript 304744 305298 . - . ID=Thaps28199;Parent=Thaps28199;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 304744 305298 . - 0 ID=Thaps28199;Parent=Thaps28199;rank=1 chr5 . exon 304744 305298 . - . ID=Thaps28199.1;Parent=Thaps28199;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 308204 309032 . - . ID=Thaps5074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1W3];external_name=Thaps5074;logic_name=jgi_thaps3 chr5 ensembl transcript 308204 309032 . - . ID=Thaps5074;Parent=Thaps5074;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 308204 308550 . - 0 ID=Thaps5074;Parent=Thaps5074;rank=3 chr5 . exon 308204 308550 . - . ID=Thaps5074.3;Parent=Thaps5074;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 308644 308705 . - 0 ID=Thaps5074;Parent=Thaps5074;rank=2 chr5 . exon 308644 308705 . - . ID=Thaps5074.2;Parent=Thaps5074;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 308788 309032 . - 0 ID=Thaps5074;Parent=Thaps5074;rank=1 chr5 . exon 308788 309032 . - . ID=Thaps5074.1;Parent=Thaps5074;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 309247 311209 . + . ID=Thaps5075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1W4];external_name=Thaps5075;logic_name=jgi_thaps3 chr5 ensembl transcript 309247 311209 . + . ID=Thaps5075;Parent=Thaps5075;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 309247 310928 . + 0 ID=Thaps5075;Parent=Thaps5075;rank=1 chr5 . exon 309247 310928 . + . ID=Thaps5075.1;Parent=Thaps5075;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 311016 311209 . + 0 ID=Thaps5075;Parent=Thaps5075;rank=2 chr5 . repeat_region 317818 319422 . - . description=MuDR1_TP chr5 . repeat_region 319412 319771 . - . description=MuDR1_TP chr5 ensembl protein_coding_gene 311320 312018 . + . ID=Thaps444;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1W5];external_name=Thaps444;logic_name=jgi_thaps3 chr5 ensembl transcript 311320 312018 . + . ID=Thaps444;Parent=Thaps444;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 311320 312018 . + 0 ID=Thaps444;Parent=Thaps444;rank=1 chr5 . exon 311320 312018 . + . ID=Thaps444.1;Parent=Thaps444;constitutive=1;rank=1 chr5 . exon 311016 311209 . + . ID=Thaps5075.2;Parent=Thaps5075;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 312198 313528 . - . ID=Thaps5077;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1W6];external_name=Thaps5077;logic_name=jgi_thaps3 chr5 ensembl transcript 312198 313528 . - . ID=Thaps5077;Parent=Thaps5077;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 312198 312314 . - 0 ID=Thaps5077;Parent=Thaps5077;rank=4 chr5 . exon 312198 312314 . - . ID=Thaps5077.4;Parent=Thaps5077;constitutive=1;rank=4 chr5 . CDS 312381 312521 . - 0 ID=Thaps5077;Parent=Thaps5077;rank=3 chr5 . exon 312381 312521 . - . ID=Thaps5077.3;Parent=Thaps5077;constitutive=1;rank=3 chr5 . CDS 312605 312843 . - 0 ID=Thaps5077;Parent=Thaps5077;rank=2 chr5 . exon 312605 312843 . - . ID=Thaps5077.2;Parent=Thaps5077;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 312988 313528 . - 0 ID=Thaps5077;Parent=Thaps5077;rank=1 chr5 . exon 312988 313528 . - . ID=Thaps5077.1;Parent=Thaps5077;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 314203 315837 . + . ID=Thaps5078;biotype=protein_coding;description=Histidyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C1W7];external_name=Thaps5078;logic_name=jgi_thaps3 chr5 ensembl transcript 314203 315837 . + . ID=Thaps5078;Parent=Thaps5078;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 314203 315015 . + 0 ID=Thaps5078;Parent=Thaps5078;rank=1 chr5 . exon 314203 315015 . + . ID=Thaps5078.1;Parent=Thaps5078;constitutive=1;rank=1 chr5 . CDS 315124 315837 . + 0 ID=Thaps5078;Parent=Thaps5078;rank=2 chr5 . exon 315124 315837 . + . ID=Thaps5078.2;Parent=Thaps5078;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 315960 317738 . - . ID=Thaps5079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1W8];external_name=Thaps5079;logic_name=jgi_thaps3 chr5 ensembl transcript 315960 317738 . - . ID=Thaps5079;Parent=Thaps5079;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 315960 317738 . - 0 ID=Thaps5079;Parent=Thaps5079;rank=1 chr5 . exon 315960 317738 . - . ID=Thaps5079.1;Parent=Thaps5079;constitutive=1;rank=1 chr5 . repeat_region 319443 319463 . ? . description=trf chr5 . repeat_region 319667 319685 . ? . description=dust chr5 . repeat_region 319837 319999 . + . description=TE2c_TP chr5 . repeat_region 319997 321264 . + . description=TE1A_TP chr5 . repeat_region 321265 321316 . + . description=TE2c_TP chr5 . repeat_region 321271 321329 . - . description=TE2c_TP chr5 ensembl protein_coding_gene 321973 322829 . + . ID=Thaps262408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1W9];external_name=Thaps262408;logic_name=jgi_thaps3 chr5 ensembl transcript 321973 322829 . + . ID=Thaps262408;Parent=Thaps262408;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 321973 322395 . + 0 ID=Thaps262408;Parent=Thaps262408;rank=1 chr5 . exon 321973 322395 . + . ID=Thaps262408.1;Parent=Thaps262408;constitutive=1;rank=1 chr5 . CDS 322465 322668 . + 0 ID=Thaps262408;Parent=Thaps262408;rank=2 chr5 . exon 322465 322668 . + . ID=Thaps262408.2;Parent=Thaps262408;constitutive=1;rank=2 chr5 . CDS 322732 322829 . + 0 ID=Thaps262408;Parent=Thaps262408;rank=3 chr5 . exon 322732 322829 . + . ID=Thaps262408.3;Parent=Thaps262408;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 327066 329539 . + . ID=Thaps268830;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1X1];external_name=Thaps268830;logic_name=jgi_thaps3 chr5 ensembl transcript 327066 329539 . + . ID=Thaps268830;Parent=Thaps268830;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 327066 327130 . + 0 ID=Thaps268830;Parent=Thaps268830;rank=1 chr5 . exon 327066 327130 . + . ID=Thaps268830.1;Parent=Thaps268830;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 327321 328299 . + 0 ID=Thaps268830;Parent=Thaps268830;rank=2 chr5 . exon 327321 328299 . + . ID=Thaps268830.2;Parent=Thaps268830;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 328336 328447 . + 0 ID=Thaps268830;Parent=Thaps268830;rank=3 chr5 . exon 328336 328447 . + . ID=Thaps268830.3;Parent=Thaps268830;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 328524 328852 . + 0 ID=Thaps268830;Parent=Thaps268830;rank=4 chr5 . exon 328524 328852 . + . ID=Thaps268830.4;Parent=Thaps268830;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 328933 329120 . + 0 ID=Thaps268830;Parent=Thaps268830;rank=5 chr5 . exon 328933 329120 . + . ID=Thaps268830.5;Parent=Thaps268830;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 329197 329539 . + 0 ID=Thaps268830;Parent=Thaps268830;rank=6 chr5 . exon 329197 329539 . + . ID=Thaps268830.6;Parent=Thaps268830;constitutive=1;ensembl_end_phase=1;rank=6 chr5 ensembl protein_coding_gene 323001 326635 . - . ID=Thaps34505;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1X0];external_name=Thaps34505;logic_name=jgi_thaps3 chr5 ensembl transcript 323001 326635 . - . ID=Thaps34505;Parent=Thaps34505;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 323001 323318 . - 0 ID=Thaps34505;Parent=Thaps34505;rank=5 chr5 . exon 323001 323318 . - . ID=Thaps34505.5;Parent=Thaps34505;constitutive=1;rank=5 chr5 . CDS 323398 324564 . - 0 ID=Thaps34505;Parent=Thaps34505;rank=4 chr5 . exon 323398 324564 . - . ID=Thaps34505.4;Parent=Thaps34505;constitutive=1;rank=4 chr5 . CDS 324723 324800 . - 0 ID=Thaps34505;Parent=Thaps34505;rank=3 chr5 . exon 324723 324800 . - . ID=Thaps34505.3;Parent=Thaps34505;constitutive=1;rank=3 chr5 . CDS 324861 325872 . - 0 ID=Thaps34505;Parent=Thaps34505;rank=2 chr5 . exon 324861 325872 . - . ID=Thaps34505.2;Parent=Thaps34505;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 326010 326635 . - 0 ID=Thaps34505;Parent=Thaps34505;rank=1 chr5 . exon 326010 326635 . - . ID=Thaps34505.1;Parent=Thaps34505;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . biological_region 338231 338235 0.999 + . logic_name=eponine chr5 ensembl protein_coding_gene 335016 338354 . - . ID=Thaps22577;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1X4];external_name=Thaps22577;logic_name=jgi_thaps3 chr5 ensembl transcript 335016 338354 . - . ID=Thaps22577;Parent=Thaps22577;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 335016 338354 . - 0 ID=Thaps22577;Parent=Thaps22577;rank=1 chr5 . exon 335016 338354 . - . ID=Thaps22577.1;Parent=Thaps22577;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 331644 334800 . + . ID=Thaps262412;biotype=protein_coding;description=Protease of the insulinase family [Source:UniProtKB/TrEMBL%3BAcc:B8C1X3];external_name=Thaps262412;logic_name=jgi_thaps3 chr5 ensembl transcript 331644 334800 . + . ID=Thaps262412;Parent=Thaps262412;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 331644 331922 . + 0 ID=Thaps262412;Parent=Thaps262412;rank=1 chr5 . exon 331644 331922 . + . ID=Thaps262412.1;Parent=Thaps262412;constitutive=1;rank=1 chr5 . CDS 331998 332600 . + 0 ID=Thaps262412;Parent=Thaps262412;rank=2 chr5 . exon 331998 332600 . + . ID=Thaps262412.2;Parent=Thaps262412;constitutive=1;rank=2 chr5 . CDS 332680 332999 . + 0 ID=Thaps262412;Parent=Thaps262412;rank=3 chr5 . exon 332680 332999 . + . ID=Thaps262412.3;Parent=Thaps262412;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 333108 333147 . + 0 ID=Thaps262412;Parent=Thaps262412;rank=4 chr5 . exon 333108 333147 . + . ID=Thaps262412.4;Parent=Thaps262412;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 333247 333420 . + 0 ID=Thaps262412;Parent=Thaps262412;rank=5 chr5 . exon 333247 333420 . + . ID=Thaps262412.5;Parent=Thaps262412;constitutive=1;rank=5 chr5 . CDS 333484 334800 . + 0 ID=Thaps262412;Parent=Thaps262412;rank=6 chr5 . exon 333484 334800 . + . ID=Thaps262412.6;Parent=Thaps262412;constitutive=1;rank=6 chr5 ensembl protein_coding_gene 338719 340057 . + . ID=Thaps40627;biotype=protein_coding;description=Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8C1X5];external_name=Thaps40627;logic_name=jgi_thaps3 chr5 ensembl transcript 338719 340057 . + . ID=Thaps40627;Parent=Thaps40627;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 338719 338817 . + 0 ID=Thaps40627;Parent=Thaps40627;rank=1 chr5 . exon 338719 338817 . + . ID=Thaps40627.1;Parent=Thaps40627;constitutive=1;rank=1 chr5 . CDS 338925 339439 . + 0 ID=Thaps40627;Parent=Thaps40627;rank=2 chr5 . exon 338925 339439 . + . ID=Thaps40627.2;Parent=Thaps40627;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 339570 339839 . + 0 ID=Thaps40627;Parent=Thaps40627;rank=3 chr5 . CDS 339985 340057 . + 0 ID=Thaps40627;Parent=Thaps40627;rank=4 chr5 ensembl protein_coding_gene 329608 330636 . - . ID=Thaps5083;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1X2];external_name=Thaps5083;logic_name=jgi_thaps3 chr5 ensembl transcript 329608 330636 . - . ID=Thaps5083;Parent=Thaps5083;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 329608 330636 . - 0 ID=Thaps5083;Parent=Thaps5083;rank=1 chr5 . exon 329608 330636 . - . ID=Thaps5083.1;Parent=Thaps5083;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 341622 343100 . + . ID=Thaps22579;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1X7];external_name=Thaps22579;logic_name=jgi_thaps3 chr5 ensembl transcript 341622 343100 . + . ID=Thaps22579;Parent=Thaps22579;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 341622 341751 . + 0 ID=Thaps22579;Parent=Thaps22579;rank=1 chr5 . exon 341622 341751 . + . ID=Thaps22579.1;Parent=Thaps22579;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 341921 342084 . + 0 ID=Thaps22579;Parent=Thaps22579;rank=2 chr5 . exon 341921 342084 . + . ID=Thaps22579.2;Parent=Thaps22579;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 342438 343100 . + 0 ID=Thaps22579;Parent=Thaps22579;rank=3 chr5 . exon 342438 343100 . + . ID=Thaps22579.3;Parent=Thaps22579;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 347849 350500 . - . ID=Thaps22580;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y1];external_name=Thaps22580;logic_name=jgi_thaps3 chr5 ensembl transcript 347849 350500 . - . ID=Thaps22580;Parent=Thaps22580;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 347849 350500 . - 0 ID=Thaps22580;Parent=Thaps22580;rank=1 chr5 . exon 347849 350500 . - . ID=Thaps22580.1;Parent=Thaps22580;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 346995 347209 . + . ID=Thaps262414;biotype=protein_coding;description=Cold-shock DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y0];external_name=Thaps262414;logic_name=jgi_thaps3 chr5 ensembl transcript 346995 347209 . + . ID=Thaps262414;Parent=Thaps262414;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 346995 347209 . + 0 ID=Thaps262414;Parent=Thaps262414;rank=1 chr5 . exon 346995 347209 . + . ID=Thaps262414.1;Parent=Thaps262414;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 339570 339839 . + . ID=Thaps40627.3;Parent=Thaps40627;constitutive=1;rank=3 chr5 . exon 339985 340057 . + . ID=Thaps40627.4;Parent=Thaps40627;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 340647 341093 . - . ID=Thaps5087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1X6];external_name=Thaps5087;logic_name=jgi_thaps3 chr5 ensembl transcript 340647 341093 . - . ID=Thaps5087;Parent=Thaps5087;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 340647 341093 . - 0 ID=Thaps5087;Parent=Thaps5087;rank=1 chr5 . exon 340647 341093 . - . ID=Thaps5087.1;Parent=Thaps5087;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 343238 344198 . - . ID=Thaps5089;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1X8];external_name=Thaps5089;logic_name=jgi_thaps3 chr5 ensembl transcript 343238 344198 . - . ID=Thaps5089;Parent=Thaps5089;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 343238 343451 . - 0 ID=Thaps5089;Parent=Thaps5089;rank=2 chr5 . exon 343238 343451 . - . ID=Thaps5089.2;Parent=Thaps5089;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 343555 344198 . - 0 ID=Thaps5089;Parent=Thaps5089;rank=1 chr5 . exon 343555 344198 . - . ID=Thaps5089.1;Parent=Thaps5089;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 344428 346445 . - . ID=Thaps5090;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1X9];external_name=Thaps5090;logic_name=jgi_thaps3 chr5 ensembl transcript 344428 346445 . - . ID=Thaps5090;Parent=Thaps5090;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 344428 344684 . - 0 ID=Thaps5090;Parent=Thaps5090;rank=5 chr5 . exon 344428 344684 . - . ID=Thaps5090.5;Parent=Thaps5090;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 344754 345315 . - 0 ID=Thaps5090;Parent=Thaps5090;rank=4 chr5 . exon 344754 345315 . - . ID=Thaps5090.4;Parent=Thaps5090;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 345416 345746 . - 0 ID=Thaps5090;Parent=Thaps5090;rank=3 chr5 . exon 345416 345746 . - . ID=Thaps5090.3;Parent=Thaps5090;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 345852 345916 . - 0 ID=Thaps5090;Parent=Thaps5090;rank=2 chr5 . exon 345852 345916 . - . ID=Thaps5090.2;Parent=Thaps5090;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 346029 346445 . - 0 ID=Thaps5090;Parent=Thaps5090;rank=1 chr5 . exon 346029 346445 . - . ID=Thaps5090.1;Parent=Thaps5090;constitutive=1;rank=1 chr5 . repeat_region 354670 354702 . ? . description=trf chr5 . repeat_region 356180 356275 . ? . description=trf chr5 . repeat_region 357079 357105 . ? . description=trf chr5 ensembl protein_coding_gene 358169 360052 . - . ID=Thaps22582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y5];external_name=Thaps22582;logic_name=jgi_thaps3 chr5 ensembl transcript 358169 360052 . - . ID=Thaps22582;Parent=Thaps22582;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 358169 360052 . - 0 ID=Thaps22582;Parent=Thaps22582;rank=1 chr5 . exon 358169 360052 . - . ID=Thaps22582.1;Parent=Thaps22582;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 351080 352314 . - . ID=Thaps40630;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y2];external_name=Thaps40630;logic_name=jgi_thaps3 chr5 ensembl transcript 351080 352314 . - . ID=Thaps40630;Parent=Thaps40630;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 351080 351267 . - 0 ID=Thaps40630;Parent=Thaps40630;rank=3 chr5 . exon 351080 351267 . - . ID=Thaps40630.3;Parent=Thaps40630;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 351347 352015 . - 0 ID=Thaps40630;Parent=Thaps40630;rank=2 chr5 . exon 351347 352015 . - . ID=Thaps40630.2;Parent=Thaps40630;constitutive=1;rank=2 chr5 . CDS 352290 352314 . - 0 ID=Thaps40630;Parent=Thaps40630;rank=1 chr5 . exon 352290 352314 . - . ID=Thaps40630.1;Parent=Thaps40630;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 353024 356491 . - . ID=Thaps5093;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y3];external_name=Thaps5093;logic_name=jgi_thaps3 chr5 ensembl transcript 353024 356491 . - . ID=Thaps5093;Parent=Thaps5093;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 353024 353137 . - 0 ID=Thaps5093;Parent=Thaps5093;rank=7 chr5 . exon 353024 353137 . - . ID=Thaps5093.7;Parent=Thaps5093;constitutive=1;rank=7 chr5 . CDS 353209 353477 . - 0 ID=Thaps5093;Parent=Thaps5093;rank=6 chr5 . exon 353209 353477 . - . ID=Thaps5093.6;Parent=Thaps5093;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 353552 353899 . - 0 ID=Thaps5093;Parent=Thaps5093;rank=5 chr5 . exon 353552 353899 . - . ID=Thaps5093.5;Parent=Thaps5093;constitutive=1;rank=5 chr5 . CDS 354024 354479 . - 0 ID=Thaps5093;Parent=Thaps5093;rank=4 chr5 . exon 354024 354479 . - . ID=Thaps5093.4;Parent=Thaps5093;constitutive=1;rank=4 chr5 . CDS 354563 355111 . - 0 ID=Thaps5093;Parent=Thaps5093;rank=3 chr5 . exon 354563 355111 . - . ID=Thaps5093.3;Parent=Thaps5093;constitutive=1;rank=3 chr5 . CDS 355189 355254 . - 0 ID=Thaps5093;Parent=Thaps5093;rank=2 chr5 . exon 355189 355254 . - . ID=Thaps5093.2;Parent=Thaps5093;constitutive=1;rank=2 chr5 . CDS 355324 356491 . - 0 ID=Thaps5093;Parent=Thaps5093;rank=1 chr5 . exon 355324 356491 . - . ID=Thaps5093.1;Parent=Thaps5093;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 357158 357928 . + . ID=Thaps5094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y4];external_name=Thaps5094;logic_name=jgi_thaps3 chr5 ensembl transcript 357158 357928 . + . ID=Thaps5094;Parent=Thaps5094;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 357158 357928 . + 0 ID=Thaps5094;Parent=Thaps5094;rank=1 chr5 . exon 357158 357928 . + . ID=Thaps5094.1;Parent=Thaps5094;constitutive=1;rank=1 chr5 . repeat_region 363097 363105 . ? . description=dust chr5 . repeat_region 368516 368561 . ? . description=dust chr5 ensembl tRNA_gene 365020 365090 . - . ID=EPrTPOG00000000028;biotype=tRNA;description=tRNA-Gly for anticodon GCC [Source:TRNASCAN_SE%3BAcc:tRNA-Gly];external_name=tRNA-Gly;logic_name=ncrna_eg chr5 ensembl transcript 365020 365090 . - . ID=EPrTPOT00000000026;Parent=EPrTPOG00000000028;biotype=tRNA;logic_name=ncrna_eg chr5 . exon 365020 365090 . - . ID=EPrTPOE00000000028;Parent=EPrTPOT00000000026;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 360551 361546 . + . ID=Thaps22583;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y6];external_name=Thaps22583;logic_name=jgi_thaps3 chr5 ensembl transcript 360551 361546 . + . ID=Thaps22583;Parent=Thaps22583;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 360551 360830 . + 0 ID=Thaps22583;Parent=Thaps22583;rank=1 chr5 . exon 360551 360830 . + . ID=Thaps22583.1;Parent=Thaps22583;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 360959 361257 . + 0 ID=Thaps22583;Parent=Thaps22583;rank=2 chr5 . exon 360959 361257 . + . ID=Thaps22583.2;Parent=Thaps22583;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 361373 361546 . + 0 ID=Thaps22583;Parent=Thaps22583;rank=3 chr5 . exon 361373 361546 . + . ID=Thaps22583.3;Parent=Thaps22583;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 361869 362950 . - . ID=Thaps268835;biotype=protein_coding;description=3%2C2-TRANS-ENOYL-COA isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y7];external_name=ECI1;logic_name=jgi_thaps3 chr5 ensembl transcript 361869 362950 . - . ID=Thaps268835;Parent=Thaps268835;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 361869 362111 . - 0 ID=Thaps268835;Parent=Thaps268835;rank=3 chr5 . exon 361869 362111 . - . ID=Thaps268835.3;Parent=Thaps268835;constitutive=1;rank=3 chr5 . CDS 362166 362661 . - 0 ID=Thaps268835;Parent=Thaps268835;rank=2 chr5 . exon 362166 362661 . - . ID=Thaps268835.2;Parent=Thaps268835;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 362745 362950 . - 0 ID=Thaps268835;Parent=Thaps268835;rank=1 chr5 . exon 362745 362950 . - . ID=Thaps268835.1;Parent=Thaps268835;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 366187 368021 . - . ID=Thaps34030;biotype=protein_coding;description=Malic enzyme [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z0];external_name=MAO1;logic_name=jgi_thaps3 chr5 ensembl transcript 366187 368021 . - . ID=Thaps34030;Parent=Thaps34030;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 366187 366865 . - 0 ID=Thaps34030;Parent=Thaps34030;rank=3 chr5 . exon 366187 366865 . - . ID=Thaps34030.3;Parent=Thaps34030;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 366941 367203 . - 0 ID=Thaps34030;Parent=Thaps34030;rank=2 chr5 . exon 366941 367203 . - . ID=Thaps34030.2;Parent=Thaps34030;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 367284 368021 . - 0 ID=Thaps34030;Parent=Thaps34030;rank=1 chr5 . exon 367284 368021 . - . ID=Thaps34030.1;Parent=Thaps34030;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 363406 364698 . + . ID=Thaps5098;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y8];external_name=Thaps5098;logic_name=jgi_thaps3 chr5 ensembl transcript 363406 364698 . + . ID=Thaps5098;Parent=Thaps5098;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 363406 364698 . + 0 ID=Thaps5098;Parent=Thaps5098;rank=1 chr5 . exon 363406 364698 . + . ID=Thaps5098.1;Parent=Thaps5098;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 365183 366038 . + . ID=Thaps5099;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Y9];external_name=Thaps5099;logic_name=jgi_thaps3 chr5 ensembl transcript 365183 366038 . + . ID=Thaps5099;Parent=Thaps5099;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 365183 365468 . + 0 ID=Thaps5099;Parent=Thaps5099;rank=1 chr5 . exon 365183 365468 . + . ID=Thaps5099.1;Parent=Thaps5099;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 365565 365836 . + 0 ID=Thaps5099;Parent=Thaps5099;rank=2 chr5 . exon 365565 365836 . + . ID=Thaps5099.2;Parent=Thaps5099;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 365928 366038 . + 0 ID=Thaps5099;Parent=Thaps5099;rank=3 chr5 . exon 365928 366038 . + . ID=Thaps5099.3;Parent=Thaps5099;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 368566 369612 . + . ID=Thaps5101;biotype=protein_coding;description=Ubiquinone/menaquinone biosynthesis methyltransferase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z1];external_name=Thaps5101;logic_name=jgi_thaps3 chr5 ensembl transcript 368566 369612 . + . ID=Thaps5101;Parent=Thaps5101;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 368566 369612 . + 0 ID=Thaps5101;Parent=Thaps5101;rank=1 chr5 . exon 368566 369612 . + . ID=Thaps5101.1;Parent=Thaps5101;constitutive=1;rank=1 chr5 . repeat_region 379263 379318 . ? . description=trf chr5 ensembl protein_coding_gene 369779 373792 . - . ID=Thaps22585;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z2];external_name=Thaps22585;logic_name=jgi_thaps3 chr5 ensembl transcript 369779 373792 . - . ID=Thaps22585;Parent=Thaps22585;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 369779 369799 . - 0 ID=Thaps22585;Parent=Thaps22585;rank=4 chr5 . exon 369779 369799 . - . ID=Thaps22585.4;Parent=Thaps22585;constitutive=1;rank=4 chr5 . CDS 369941 370003 . - 0 ID=Thaps22585;Parent=Thaps22585;rank=3 chr5 . exon 369941 370003 . - . ID=Thaps22585.3;Parent=Thaps22585;constitutive=1;rank=3 chr5 . CDS 370123 370593 . - 0 ID=Thaps22585;Parent=Thaps22585;rank=2 chr5 . exon 370123 370593 . - . ID=Thaps22585.2;Parent=Thaps22585;constitutive=1;rank=2 chr5 . CDS 371036 373792 . - 0 ID=Thaps22585;Parent=Thaps22585;rank=1 chr5 . exon 371036 373792 . - . ID=Thaps22585.1;Parent=Thaps22585;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 375102 376077 . + . ID=Thaps34510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z3];external_name=Thaps34510;logic_name=jgi_thaps3 chr5 ensembl transcript 375102 376077 . + . ID=Thaps34510;Parent=Thaps34510;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 375102 375447 . + 0 ID=Thaps34510;Parent=Thaps34510;rank=1 chr5 . exon 375102 375447 . + . ID=Thaps34510.1;Parent=Thaps34510;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 375533 376077 . + 0 ID=Thaps34510;Parent=Thaps34510;rank=2 chr5 . exon 375533 376077 . + . ID=Thaps34510.2;Parent=Thaps34510;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 376295 377185 . - . ID=Thaps5104;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z4];external_name=Thaps5104;logic_name=jgi_thaps3 chr5 ensembl transcript 376295 377185 . - . ID=Thaps5104;Parent=Thaps5104;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 376295 377185 . - 0 ID=Thaps5104;Parent=Thaps5104;rank=1 chr5 . exon 376295 377185 . - . ID=Thaps5104.1;Parent=Thaps5104;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 377985 379247 . + . ID=Thaps5105;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z5];external_name=Thaps5105;logic_name=jgi_thaps3 chr5 ensembl transcript 377985 379247 . + . ID=Thaps5105;Parent=Thaps5105;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 377985 379247 . + 0 ID=Thaps5105;Parent=Thaps5105;rank=1 chr5 . exon 377985 379247 . + . ID=Thaps5105.1;Parent=Thaps5105;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 379333 380832 . - . ID=Thaps5106;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z6];external_name=Thaps5106;logic_name=jgi_thaps3 chr5 ensembl transcript 379333 380832 . - . ID=Thaps5106;Parent=Thaps5106;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 379333 380130 . - 0 ID=Thaps5106;Parent=Thaps5106;rank=2 chr5 . exon 379333 380130 . - . ID=Thaps5106.2;Parent=Thaps5106;constitutive=1;rank=2 chr5 . CDS 380206 380832 . - 0 ID=Thaps5106;Parent=Thaps5106;rank=1 chr5 ensembl protein_coding_gene 389087 391388 . - . ID=Thaps22589;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C202];external_name=Thaps22589;logic_name=jgi_thaps3 chr5 ensembl transcript 389087 391388 . - . ID=Thaps22589;Parent=Thaps22589;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 389087 389137 . - 0 ID=Thaps22589;Parent=Thaps22589;rank=4 chr5 . exon 389087 389137 . - . ID=Thaps22589.4;Parent=Thaps22589;constitutive=1;rank=4 chr5 . CDS 389160 390300 . - 0 ID=Thaps22589;Parent=Thaps22589;rank=3 chr5 . exon 389160 390300 . - . ID=Thaps22589.3;Parent=Thaps22589;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 390576 391079 . - 0 ID=Thaps22589;Parent=Thaps22589;rank=2 chr5 . CDS 391234 391388 . - 0 ID=Thaps22589;Parent=Thaps22589;rank=1 chr5 ensembl protein_coding_gene 383546 385708 . + . ID=Thaps262422;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z9];external_name=Thaps262422;logic_name=jgi_thaps3 chr5 ensembl transcript 383546 385708 . + . ID=Thaps262422;Parent=Thaps262422;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 383546 384085 . + 0 ID=Thaps262422;Parent=Thaps262422;rank=1 chr5 . exon 383546 384085 . + . ID=Thaps262422.1;Parent=Thaps262422;constitutive=1;rank=1 chr5 . CDS 384116 384153 . + 0 ID=Thaps262422;Parent=Thaps262422;rank=2 chr5 . exon 384116 384153 . + . ID=Thaps262422.2;Parent=Thaps262422;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 384214 385389 . + 0 ID=Thaps262422;Parent=Thaps262422;rank=3 chr5 . exon 384214 385389 . + . ID=Thaps262422.3;Parent=Thaps262422;constitutive=1;rank=3 chr5 . CDS 385453 385708 . + 0 ID=Thaps262422;Parent=Thaps262422;rank=4 chr5 . exon 385453 385708 . + . ID=Thaps262422.4;Parent=Thaps262422;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 388100 388939 . + . ID=Thaps268839;biotype=protein_coding;description=RNA binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8C201];external_name=Thaps268839;logic_name=jgi_thaps3 chr5 ensembl transcript 388100 388939 . + . ID=Thaps268839;Parent=Thaps268839;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 388100 388939 . + 0 ID=Thaps268839;Parent=Thaps268839;rank=1 chr5 . exon 388100 388939 . + . ID=Thaps268839.1;Parent=Thaps268839;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 381390 381821 . + . ID=Thaps28209;biotype=protein_coding;description=RS23%2C ribosomal protein 23 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z7];external_name=RS23;logic_name=jgi_thaps3 chr5 ensembl transcript 381390 381821 . + . ID=Thaps28209;Parent=Thaps28209;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 381390 381821 . + 0 ID=Thaps28209;Parent=Thaps28209;rank=1 chr5 . exon 381390 381821 . + . ID=Thaps28209.1;Parent=Thaps28209;constitutive=1;rank=1 chr5 . exon 380206 380832 . - . ID=Thaps5106.1;Parent=Thaps5106;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 382220 383194 . - . ID=Thaps5108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1Z8];external_name=Thaps5108;logic_name=jgi_thaps3 chr5 ensembl transcript 382220 383194 . - . ID=Thaps5108;Parent=Thaps5108;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 382220 382318 . - 0 ID=Thaps5108;Parent=Thaps5108;rank=3 chr5 . exon 382220 382318 . - . ID=Thaps5108.3;Parent=Thaps5108;constitutive=1;rank=3 chr5 . CDS 382403 382564 . - 0 ID=Thaps5108;Parent=Thaps5108;rank=2 chr5 . exon 382403 382564 . - . ID=Thaps5108.2;Parent=Thaps5108;constitutive=1;rank=2 chr5 . CDS 382667 383194 . - 0 ID=Thaps5108;Parent=Thaps5108;rank=1 chr5 . exon 382667 383194 . - . ID=Thaps5108.1;Parent=Thaps5108;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 385836 386645 . - . ID=Thaps5110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C200];external_name=Thaps5110;logic_name=jgi_thaps3 chr5 ensembl transcript 385836 386645 . - . ID=Thaps5110;Parent=Thaps5110;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 385836 386645 . - 0 ID=Thaps5110;Parent=Thaps5110;rank=1 chr5 . exon 385836 386645 . - . ID=Thaps5110.1;Parent=Thaps5110;constitutive=1;rank=1 chr5 . repeat_region 391573 391583 . ? . description=dust chr5 . repeat_region 394259 394280 . ? . description=trf chr5 . repeat_region 394259 394280 . ? . description=dust chr5 . exon 390576 391079 . - . ID=Thaps22589.2;Parent=Thaps22589;constitutive=1;rank=2 chr5 . exon 391234 391388 . - . ID=Thaps22589.1;Parent=Thaps22589;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 395877 397646 . - . ID=Thaps22591;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C205];external_name=Thaps22591;logic_name=jgi_thaps3 chr5 ensembl transcript 395877 397646 . - . ID=Thaps22591;Parent=Thaps22591;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 395877 397646 . - 0 ID=Thaps22591;Parent=Thaps22591;rank=1 chr5 . exon 395877 397646 . - . ID=Thaps22591.1;Parent=Thaps22591;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 391747 392451 . + . ID=Thaps268840;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C203];external_name=Thaps268840;logic_name=jgi_thaps3 chr5 ensembl transcript 391747 392451 . + . ID=Thaps268840;Parent=Thaps268840;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 391747 391996 . + 0 ID=Thaps268840;Parent=Thaps268840;rank=1 chr5 . exon 391747 391996 . + . ID=Thaps268840.1;Parent=Thaps268840;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 392123 392451 . + 0 ID=Thaps268840;Parent=Thaps268840;rank=2 chr5 . exon 392123 392451 . + . ID=Thaps268840.2;Parent=Thaps268840;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 395139 395627 . + . ID=Thaps5114;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C204];external_name=Thaps5114;logic_name=jgi_thaps3 chr5 ensembl transcript 395139 395627 . + . ID=Thaps5114;Parent=Thaps5114;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 395139 395627 . + 0 ID=Thaps5114;Parent=Thaps5114;rank=1 chr5 . exon 395139 395627 . + . ID=Thaps5114.1;Parent=Thaps5114;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 398223 398969 . - . ID=Thaps5116;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C206];external_name=Thaps5116;logic_name=jgi_thaps3 chr5 ensembl transcript 398223 398969 . - . ID=Thaps5116;Parent=Thaps5116;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 398223 398969 . - 0 ID=Thaps5116;Parent=Thaps5116;rank=1 chr5 . exon 398223 398969 . - . ID=Thaps5116.1;Parent=Thaps5116;constitutive=1;rank=1 chr5 . repeat_region 401636 401761 . + . description=MuDR1_TP chr5 ensembl protein_coding_gene 401987 402657 . + . ID=Thaps22592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C208];external_name=Thaps22592;logic_name=jgi_thaps3 chr5 ensembl transcript 401987 402657 . + . ID=Thaps22592;Parent=Thaps22592;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 401987 402245 . + 0 ID=Thaps22592;Parent=Thaps22592;rank=1 chr5 . exon 401987 402245 . + . ID=Thaps22592.1;Parent=Thaps22592;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 402332 402657 . + 0 ID=Thaps22592;Parent=Thaps22592;rank=2 chr5 . exon 402332 402657 . + . ID=Thaps22592.2;Parent=Thaps22592;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 399733 401429 . + . ID=Thaps5117;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C207];external_name=Thaps5117;logic_name=jgi_thaps3 chr5 ensembl transcript 399733 401429 . + . ID=Thaps5117;Parent=Thaps5117;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 399733 399906 . + 0 ID=Thaps5117;Parent=Thaps5117;rank=1 chr5 . exon 399733 399906 . + . ID=Thaps5117.1;Parent=Thaps5117;constitutive=1;rank=1 chr5 . CDS 399987 400454 . + 0 ID=Thaps5117;Parent=Thaps5117;rank=2 chr5 . exon 399987 400454 . + . ID=Thaps5117.2;Parent=Thaps5117;constitutive=1;rank=2 chr5 . CDS 400527 401429 . + 0 ID=Thaps5117;Parent=Thaps5117;rank=3 chr5 . exon 400527 401429 . + . ID=Thaps5117.3;Parent=Thaps5117;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 405693 407604 . + . ID=Thaps5119;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C209];external_name=Thaps5119;logic_name=jgi_thaps3 chr5 ensembl transcript 405693 407604 . + . ID=Thaps5119;Parent=Thaps5119;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 405693 405817 . + 0 ID=Thaps5119;Parent=Thaps5119;rank=1 chr5 . exon 405693 405817 . + . ID=Thaps5119.1;Parent=Thaps5119;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 405902 406424 . + 0 ID=Thaps5119;Parent=Thaps5119;rank=2 chr5 . exon 405902 406424 . + . ID=Thaps5119.2;Parent=Thaps5119;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 406510 406663 . + 0 ID=Thaps5119;Parent=Thaps5119;rank=3 chr5 . exon 406510 406663 . + . ID=Thaps5119.3;Parent=Thaps5119;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 406755 406805 . + 0 ID=Thaps5119;Parent=Thaps5119;rank=4 chr5 . exon 406755 406805 . + . ID=Thaps5119.4;Parent=Thaps5119;constitutive=1;rank=4 chr5 . CDS 406994 407604 . + 0 ID=Thaps5119;Parent=Thaps5119;rank=5 chr5 . exon 406994 407604 . + . ID=Thaps5119.5;Parent=Thaps5119;constitutive=1;ensembl_end_phase=2;rank=5 chr5 ensembl protein_coding_gene 408654 409313 . - . ID=Thaps5120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C210];external_name=Thaps5120;logic_name=jgi_thaps3 chr5 ensembl transcript 408654 409313 . - . ID=Thaps5120;Parent=Thaps5120;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 408654 409313 . - 0 ID=Thaps5120;Parent=Thaps5120;rank=1 chr5 . exon 408654 409313 . - . ID=Thaps5120.1;Parent=Thaps5120;constitutive=1;rank=1 chr5 . repeat_region 409970 409985 . ? . description=dust chr5 . repeat_region 412776 412804 . ? . description=trf chr5 ensembl protein_coding_gene 411434 412246 . - . ID=Thaps22593;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C212];external_name=Thaps22593;logic_name=jgi_thaps3 chr5 ensembl transcript 411434 412246 . - . ID=Thaps22593;Parent=Thaps22593;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 411434 412246 . - 0 ID=Thaps22593;Parent=Thaps22593;rank=1 chr5 . exon 411434 412246 . - . ID=Thaps22593.1;Parent=Thaps22593;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 419014 419883 . - . ID=Thaps22596;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C215];external_name=Thaps22596;logic_name=jgi_thaps3 chr5 ensembl transcript 419014 419883 . - . ID=Thaps22596;Parent=Thaps22596;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 419014 419883 . - 0 ID=Thaps22596;Parent=Thaps22596;rank=1 chr5 . exon 419014 419883 . - . ID=Thaps22596.1;Parent=Thaps22596;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 412607 416418 . - . ID=Thaps28217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C213];external_name=Thaps28217;logic_name=jgi_thaps3 chr5 ensembl transcript 412607 416418 . - . ID=Thaps28217;Parent=Thaps28217;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 412607 412804 . - 0 ID=Thaps28217;Parent=Thaps28217;rank=6 chr5 . exon 412607 412804 . - . ID=Thaps28217.6;Parent=Thaps28217;constitutive=1;rank=6 chr5 . CDS 412890 413129 . - 0 ID=Thaps28217;Parent=Thaps28217;rank=5 chr5 . exon 412890 413129 . - . ID=Thaps28217.5;Parent=Thaps28217;constitutive=1;rank=5 chr5 . CDS 413214 414014 . - 0 ID=Thaps28217;Parent=Thaps28217;rank=4 chr5 . exon 413214 414014 . - . ID=Thaps28217.4;Parent=Thaps28217;constitutive=1;rank=4 chr5 . CDS 414091 414801 . - 0 ID=Thaps28217;Parent=Thaps28217;rank=3 chr5 . exon 414091 414801 . - . ID=Thaps28217.3;Parent=Thaps28217;constitutive=1;rank=3 chr5 . CDS 414884 416036 . - 0 ID=Thaps28217;Parent=Thaps28217;rank=2 chr5 . exon 414884 416036 . - . ID=Thaps28217.2;Parent=Thaps28217;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 416348 416418 . - 0 ID=Thaps28217;Parent=Thaps28217;rank=1 chr5 . exon 416348 416418 . - . ID=Thaps28217.1;Parent=Thaps28217;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 410266 410907 . + . ID=Thaps5121;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C211];external_name=Thaps5121;logic_name=jgi_thaps3 chr5 ensembl transcript 410266 410907 . + . ID=Thaps5121;Parent=Thaps5121;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 410266 410907 . + 0 ID=Thaps5121;Parent=Thaps5121;rank=1 chr5 . exon 410266 410907 . + . ID=Thaps5121.1;Parent=Thaps5121;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 418005 418606 . - . ID=Thaps5125;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C214];external_name=Thaps5125;logic_name=jgi_thaps3 chr5 ensembl transcript 418005 418606 . - . ID=Thaps5125;Parent=Thaps5125;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 418005 418258 . - 0 ID=Thaps5125;Parent=Thaps5125;rank=2 chr5 . exon 418005 418258 . - . ID=Thaps5125.2;Parent=Thaps5125;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 418417 418606 . - 0 ID=Thaps5125;Parent=Thaps5125;rank=1 chr5 . exon 418417 418606 . - . ID=Thaps5125.1;Parent=Thaps5125;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 426203 427306 . - . ID=Thaps22599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C220];external_name=Thaps22599;logic_name=jgi_thaps3 chr5 ensembl transcript 426203 427306 . - . ID=Thaps22599;Parent=Thaps22599;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 426203 427306 . - 0 ID=Thaps22599;Parent=Thaps22599;rank=1 chr5 . exon 426203 427306 . - . ID=Thaps22599.1;Parent=Thaps22599;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 423303 423509 . - . ID=Thaps268844;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C218];external_name=Thaps268844;logic_name=jgi_thaps3 chr5 ensembl transcript 423303 423509 . - . ID=Thaps268844;Parent=Thaps268844;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 423303 423509 . - 0 ID=Thaps268844;Parent=Thaps268844;rank=1 chr5 . exon 423303 423509 . - . ID=Thaps268844.1;Parent=Thaps268844;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 421219 422157 . + . ID=Thaps34018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C216];external_name=Thaps34018;logic_name=jgi_thaps3 chr5 ensembl transcript 421219 422157 . + . ID=Thaps34018;Parent=Thaps34018;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 421219 422157 . + 0 ID=Thaps34018;Parent=Thaps34018;rank=1 chr5 . exon 421219 422157 . + . ID=Thaps34018.1;Parent=Thaps34018;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 422339 423061 . + . ID=Thaps5128;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C217];external_name=Thaps5128;logic_name=jgi_thaps3 chr5 ensembl transcript 422339 423061 . + . ID=Thaps5128;Parent=Thaps5128;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 422339 423061 . + 0 ID=Thaps5128;Parent=Thaps5128;rank=1 chr5 . exon 422339 423061 . + . ID=Thaps5128.1;Parent=Thaps5128;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 424744 425913 . + . ID=Thaps5130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C219];external_name=Thaps5130;logic_name=jgi_thaps3 chr5 ensembl transcript 424744 425913 . + . ID=Thaps5130;Parent=Thaps5130;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 424744 425913 . + 0 ID=Thaps5130;Parent=Thaps5130;rank=1 chr5 . exon 424744 425913 . + . ID=Thaps5130.1;Parent=Thaps5130;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 427950 429383 . + . ID=Thaps5132;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C221];external_name=Thaps5132;logic_name=jgi_thaps3 chr5 ensembl transcript 427950 429383 . + . ID=Thaps5132;Parent=Thaps5132;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 427950 428392 . + 0 ID=Thaps5132;Parent=Thaps5132;rank=1 chr5 . exon 427950 428392 . + . ID=Thaps5132.1;Parent=Thaps5132;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 428567 429383 . + 0 ID=Thaps5132;Parent=Thaps5132;rank=2 chr5 . exon 428567 429383 . + . ID=Thaps5132.2;Parent=Thaps5132;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 429669 430451 . + . ID=Thaps5133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C222];external_name=Thaps5133;logic_name=jgi_thaps3 chr5 ensembl transcript 429669 430451 . + . ID=Thaps5133;Parent=Thaps5133;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 429669 430451 . + 0 ID=Thaps5133;Parent=Thaps5133;rank=1 chr5 . exon 429669 430451 . + . ID=Thaps5133.1;Parent=Thaps5133;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 430729 432597 . + . ID=Thaps5134;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C223];external_name=Thaps5134;logic_name=jgi_thaps3 chr5 ensembl transcript 430729 432597 . + . ID=Thaps5134;Parent=Thaps5134;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 430729 432597 . + 0 ID=Thaps5134;Parent=Thaps5134;rank=1 chr5 . exon 430729 432597 . + . ID=Thaps5134.1;Parent=Thaps5134;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 432692 434479 . - . ID=Thaps5135;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C224];external_name=Thaps5135;logic_name=jgi_thaps3 chr5 ensembl transcript 432692 434479 . - . ID=Thaps5135;Parent=Thaps5135;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 432692 434479 . - 0 ID=Thaps5135;Parent=Thaps5135;rank=1 chr5 . exon 432692 434479 . - . ID=Thaps5135.1;Parent=Thaps5135;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 435932 437459 . - . ID=Thaps5136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C225];external_name=Thaps5136;logic_name=jgi_thaps3 chr5 ensembl transcript 435932 437459 . - . ID=Thaps5136;Parent=Thaps5136;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 435932 436302 . - 0 ID=Thaps5136;Parent=Thaps5136;rank=2 chr5 . exon 435932 436302 . - . ID=Thaps5136.2;Parent=Thaps5136;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 436340 437459 . - 0 ID=Thaps5136;Parent=Thaps5136;rank=1 chr5 . exon 436340 437459 . - . ID=Thaps5136.1;Parent=Thaps5136;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 437999 439339 . + . ID=Thaps5137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C226];external_name=Thaps5137;logic_name=jgi_thaps3 chr5 ensembl transcript 437999 439339 . + . ID=Thaps5137;Parent=Thaps5137;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 437999 439339 . + 0 ID=Thaps5137;Parent=Thaps5137;rank=1 chr5 . exon 437999 439339 . + . ID=Thaps5137.1;Parent=Thaps5137;constitutive=1;rank=1 chr5 . repeat_region 440608 440621 . ? . description=dust chr5 . repeat_region 444372 444401 . ? . description=trf chr5 ensembl protein_coding_gene 439536 440357 . - . ID=Thaps22601;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C227];external_name=Thaps22601;logic_name=jgi_thaps3 chr5 ensembl transcript 439536 440357 . - . ID=Thaps22601;Parent=Thaps22601;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 439536 440357 . - 0 ID=Thaps22601;Parent=Thaps22601;rank=1 chr5 . exon 439536 440357 . - . ID=Thaps22601.1;Parent=Thaps22601;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 444640 448077 . + . ID=Thaps22603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C229];external_name=Thaps22603;logic_name=jgi_thaps3 chr5 ensembl transcript 444640 448077 . + . ID=Thaps22603;Parent=Thaps22603;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 444640 445326 . + 0 ID=Thaps22603;Parent=Thaps22603;rank=1 chr5 . exon 444640 445326 . + . ID=Thaps22603.1;Parent=Thaps22603;constitutive=1;rank=1 chr5 . CDS 445355 445673 . + 0 ID=Thaps22603;Parent=Thaps22603;rank=2 chr5 . exon 445355 445673 . + . ID=Thaps22603.2;Parent=Thaps22603;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 445751 445938 . + 0 ID=Thaps22603;Parent=Thaps22603;rank=3 chr5 . exon 445751 445938 . + . ID=Thaps22603.3;Parent=Thaps22603;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 446023 446769 . + 0 ID=Thaps22603;Parent=Thaps22603;rank=4 chr5 . exon 446023 446769 . + . ID=Thaps22603.4;Parent=Thaps22603;constitutive=1;rank=4 chr5 . CDS 446860 447448 . + 0 ID=Thaps22603;Parent=Thaps22603;rank=5 chr5 . exon 446860 447448 . + . ID=Thaps22603.5;Parent=Thaps22603;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 447539 448077 . + 0 ID=Thaps22603;Parent=Thaps22603;rank=6 chr5 . exon 447539 448077 . + . ID=Thaps22603.6;Parent=Thaps22603;constitutive=1;ensembl_end_phase=2;rank=6 chr5 ensembl protein_coding_gene 440921 443641 . + . ID=Thaps268845;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C228];external_name=Thaps268845;logic_name=jgi_thaps3 chr5 ensembl transcript 440921 443641 . + . ID=Thaps268845;Parent=Thaps268845;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 440921 441246 . + 0 ID=Thaps268845;Parent=Thaps268845;rank=1 chr5 . exon 440921 441246 . + . ID=Thaps268845.1;Parent=Thaps268845;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 441283 441403 . + 0 ID=Thaps268845;Parent=Thaps268845;rank=2 chr5 . exon 441283 441403 . + . ID=Thaps268845.2;Parent=Thaps268845;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 441494 441764 . + 0 ID=Thaps268845;Parent=Thaps268845;rank=3 chr5 . exon 441494 441764 . + . ID=Thaps268845.3;Parent=Thaps268845;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 441848 442032 . + 0 ID=Thaps268845;Parent=Thaps268845;rank=4 chr5 . exon 441848 442032 . + . ID=Thaps268845.4;Parent=Thaps268845;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 442115 442855 . + 0 ID=Thaps268845;Parent=Thaps268845;rank=5 chr5 . exon 442115 442855 . + . ID=Thaps268845.5;Parent=Thaps268845;constitutive=1;rank=5 chr5 . CDS 442936 443530 . + 0 ID=Thaps268845;Parent=Thaps268845;rank=6 chr5 . exon 442936 443530 . + . ID=Thaps268845.6;Parent=Thaps268845;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 443613 443641 . + 0 ID=Thaps268845;Parent=Thaps268845;rank=7 chr5 . exon 443613 443641 . + . ID=Thaps268845.7;Parent=Thaps268845;constitutive=1;ensembl_end_phase=2;rank=7 chr5 ensembl protein_coding_gene 458694 460112 . + . ID=Thaps22607;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C236];external_name=Thaps22607;logic_name=jgi_thaps3 chr5 ensembl transcript 458694 460112 . + . ID=Thaps22607;Parent=Thaps22607;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 458694 460112 . + 0 ID=Thaps22607;Parent=Thaps22607;rank=1 chr5 . exon 458694 460112 . + . ID=Thaps22607.1;Parent=Thaps22607;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 452598 453623 . + . ID=Thaps262431;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C232];external_name=Thaps262431;logic_name=jgi_thaps3 chr5 ensembl transcript 452598 453623 . + . ID=Thaps262431;Parent=Thaps262431;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 452598 453623 . + 0 ID=Thaps262431;Parent=Thaps262431;rank=1 chr5 . exon 452598 453623 . + . ID=Thaps262431.1;Parent=Thaps262431;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 456333 457562 . - . ID=Thaps262433;biotype=protein_coding;description=RNA binding protein of the pumilio family [Source:UniProtKB/TrEMBL%3BAcc:B8C235];external_name=Thaps262433;logic_name=jgi_thaps3 chr5 ensembl transcript 456333 457562 . - . ID=Thaps262433;Parent=Thaps262433;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 456333 456434 . - 0 ID=Thaps262433;Parent=Thaps262433;rank=5 chr5 . exon 456333 456434 . - . ID=Thaps262433.5;Parent=Thaps262433;constitutive=1;rank=5 chr5 . CDS 456517 456893 . - 0 ID=Thaps262433;Parent=Thaps262433;rank=4 chr5 . exon 456517 456893 . - . ID=Thaps262433.4;Parent=Thaps262433;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 456951 456988 . - 0 ID=Thaps262433;Parent=Thaps262433;rank=3 chr5 . exon 456951 456988 . - . ID=Thaps262433.3;Parent=Thaps262433;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 457070 457174 . - 0 ID=Thaps262433;Parent=Thaps262433;rank=2 chr5 . exon 457070 457174 . - . ID=Thaps262433.2;Parent=Thaps262433;constitutive=1;rank=2 chr5 . CDS 457276 457562 . - 0 ID=Thaps262433;Parent=Thaps262433;rank=1 chr5 . exon 457276 457562 . - . ID=Thaps262433.1;Parent=Thaps262433;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 453722 454462 . - . ID=Thaps34093;biotype=protein_coding;description=Cpma-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C233];external_name=Thaps34093;logic_name=jgi_thaps3 chr5 ensembl transcript 453722 454462 . - . ID=Thaps34093;Parent=Thaps34093;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 453722 454462 . - 0 ID=Thaps34093;Parent=Thaps34093;rank=1 chr5 . exon 453722 454462 . - . ID=Thaps34093.1;Parent=Thaps34093;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 451457 451732 . - . ID=Thaps34368;biotype=protein_coding;description=Ribosomal protein L37 [Source:UniProtKB/TrEMBL%3BAcc:B8C231];external_name=RL37A;logic_name=jgi_thaps3 chr5 ensembl transcript 451457 451732 . - . ID=Thaps34368;Parent=Thaps34368;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 451457 451732 . - 0 ID=Thaps34368;Parent=Thaps34368;rank=1 chr5 . exon 451457 451732 . - . ID=Thaps34368.1;Parent=Thaps34368;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 449861 451213 . + . ID=Thaps5141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C230];external_name=Thaps5141;logic_name=jgi_thaps3 chr5 ensembl transcript 449861 451213 . + . ID=Thaps5141;Parent=Thaps5141;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 449861 451213 . + 0 ID=Thaps5141;Parent=Thaps5141;rank=1 chr5 . exon 449861 451213 . + . ID=Thaps5141.1;Parent=Thaps5141;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 455355 455942 . + . ID=Thaps5144;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C234];external_name=Thaps5144;logic_name=jgi_thaps3 chr5 ensembl transcript 455355 455942 . + . ID=Thaps5144;Parent=Thaps5144;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 455355 455942 . + 0 ID=Thaps5144;Parent=Thaps5144;rank=1 chr5 . exon 455355 455942 . + . ID=Thaps5144.1;Parent=Thaps5144;constitutive=1;rank=1 chr5 . repeat_region 460582 460603 . ? . description=trf chr5 . repeat_region 464366 464389 . ? . description=trf chr5 ensembl protein_coding_gene 462985 465030 . + . ID=Thaps22608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C238];external_name=Thaps22608;logic_name=jgi_thaps3 chr5 ensembl transcript 462985 465030 . + . ID=Thaps22608;Parent=Thaps22608;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 462985 463248 . + 0 ID=Thaps22608;Parent=Thaps22608;rank=1 chr5 . exon 462985 463248 . + . ID=Thaps22608.1;Parent=Thaps22608;constitutive=1;rank=1 chr5 . CDS 463320 464092 . + 0 ID=Thaps22608;Parent=Thaps22608;rank=2 chr5 . exon 463320 464092 . + . ID=Thaps22608.2;Parent=Thaps22608;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 464562 465030 . + 0 ID=Thaps22608;Parent=Thaps22608;rank=3 chr5 . exon 464562 465030 . + . ID=Thaps22608.3;Parent=Thaps22608;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 465798 469830 . + . ID=Thaps22610;biotype=protein_coding;description=RL4e%2C ribosomal protein 4e 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C239];external_name=RL4E;logic_name=jgi_thaps3 chr5 ensembl transcript 465798 469830 . + . ID=Thaps22610;Parent=Thaps22610;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 465798 466854 . + 0 ID=Thaps22610;Parent=Thaps22610;rank=1 chr5 . exon 465798 466854 . + . ID=Thaps22610.1;Parent=Thaps22610;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 469751 469830 . + 0 ID=Thaps22610;Parent=Thaps22610;rank=2 chr5 ensembl protein_coding_gene 460636 462504 . - . ID=Thaps5147;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C237];external_name=Thaps5147;logic_name=jgi_thaps3 chr5 ensembl transcript 460636 462504 . - . ID=Thaps5147;Parent=Thaps5147;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 460636 462504 . - 0 ID=Thaps5147;Parent=Thaps5147;rank=1 chr5 . exon 460636 462504 . - . ID=Thaps5147.1;Parent=Thaps5147;constitutive=1;rank=1 chr5 . repeat_region 477228 477236 . ? . description=dust chr5 . repeat_region 477415 477433 . ? . description=dust chr5 . exon 469751 469830 . + . ID=Thaps22610.2;Parent=Thaps22610;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 472145 475270 . + . ID=Thaps26239;biotype=protein_coding;description=26S proteasome regulatory subunit RPN1 2 [Source:UniProtKB/TrEMBL%3BAcc:B8C241];external_name=RPN1;logic_name=jgi_thaps3 chr5 ensembl transcript 472145 475270 . + . ID=Thaps26239;Parent=Thaps26239;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 472145 472586 . + 0 ID=Thaps26239;Parent=Thaps26239;rank=1 chr5 . exon 472145 472586 . + . ID=Thaps26239.1;Parent=Thaps26239;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 472792 473102 . + 0 ID=Thaps26239;Parent=Thaps26239;rank=2 chr5 . exon 472792 473102 . + . ID=Thaps26239.2;Parent=Thaps26239;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 473221 473670 . + 0 ID=Thaps26239;Parent=Thaps26239;rank=3 chr5 . exon 473221 473670 . + . ID=Thaps26239.3;Parent=Thaps26239;constitutive=1;rank=3 chr5 . CDS 473762 475270 . + 0 ID=Thaps26239;Parent=Thaps26239;rank=4 chr5 . exon 473762 475270 . + . ID=Thaps26239.4;Parent=Thaps26239;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 470282 471589 . + . ID=Thaps40655;biotype=protein_coding;description=Homoserine dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C240];external_name=Thaps40655;logic_name=jgi_thaps3 chr5 ensembl transcript 470282 471589 . + . ID=Thaps40655;Parent=Thaps40655;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 470282 471589 . + 0 ID=Thaps40655;Parent=Thaps40655;rank=1 chr5 . exon 470282 471589 . + . ID=Thaps40655.1;Parent=Thaps40655;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 475496 477706 . - . ID=Thaps5153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C242];external_name=Thaps5153;logic_name=jgi_thaps3 chr5 ensembl transcript 475496 477706 . - . ID=Thaps5153;Parent=Thaps5153;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 475496 477211 . - 0 ID=Thaps5153;Parent=Thaps5153;rank=2 chr5 . exon 475496 477211 . - . ID=Thaps5153.2;Parent=Thaps5153;constitutive=1;rank=2 chr5 . CDS 477314 477706 . - 0 ID=Thaps5153;Parent=Thaps5153;rank=1 chr5 . exon 477314 477706 . - . ID=Thaps5153.1;Parent=Thaps5153;constitutive=1;rank=1 chr5 . repeat_region 484967 484987 . ? . description=trf chr5 ensembl protein_coding_gene 486752 487066 . + . ID=Thaps262439;biotype=protein_coding;description=GCN5 bromodomain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C245];external_name=Thaps262439;logic_name=jgi_thaps3 chr5 ensembl transcript 486752 487066 . + . ID=Thaps262439;Parent=Thaps262439;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 486752 486908 . + 0 ID=Thaps262439;Parent=Thaps262439;rank=1 chr5 . exon 486752 486908 . + . ID=Thaps262439.1;Parent=Thaps262439;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 486948 487066 . + 0 ID=Thaps262439;Parent=Thaps262439;rank=2 chr5 . exon 486948 487066 . + . ID=Thaps262439.2;Parent=Thaps262439;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 488232 490522 . - . ID=Thaps28239;biotype=protein_coding;description=Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C246];external_name=Thaps28239;logic_name=jgi_thaps3 chr5 ensembl transcript 488232 490522 . - . ID=Thaps28239;Parent=Thaps28239;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 488232 490023 . - 0 ID=Thaps28239;Parent=Thaps28239;rank=2 chr5 . exon 488232 490023 . - . ID=Thaps28239.2;Parent=Thaps28239;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 490467 490522 . - 0 ID=Thaps28239;Parent=Thaps28239;rank=1 chr5 ensembl protein_coding_gene 479247 480360 . + . ID=Thaps5154;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C243];external_name=Thaps5154;logic_name=jgi_thaps3 chr5 ensembl transcript 479247 480360 . + . ID=Thaps5154;Parent=Thaps5154;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 479247 479907 . + 0 ID=Thaps5154;Parent=Thaps5154;rank=1 chr5 . exon 479247 479907 . + . ID=Thaps5154.1;Parent=Thaps5154;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 479954 480360 . + 0 ID=Thaps5154;Parent=Thaps5154;rank=2 chr5 . exon 479954 480360 . + . ID=Thaps5154.2;Parent=Thaps5154;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 482328 483440 . + . ID=Thaps5155;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C244];external_name=Thaps5155;logic_name=jgi_thaps3 chr5 ensembl transcript 482328 483440 . + . ID=Thaps5155;Parent=Thaps5155;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 482328 483440 . + 0 ID=Thaps5155;Parent=Thaps5155;rank=1 chr5 . exon 482328 483440 . + . ID=Thaps5155.1;Parent=Thaps5155;constitutive=1;rank=1 chr5 . repeat_region 493162 493191 . ? . description=dust chr5 . repeat_region 494500 494541 . ? . description=dust chr5 ensembl protein_coding_gene 493826 496165 . + . ID=Thaps22618;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C249];external_name=Thaps22618;logic_name=jgi_thaps3 chr5 ensembl transcript 493826 496165 . + . ID=Thaps22618;Parent=Thaps22618;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 493826 496165 . + 0 ID=Thaps22618;Parent=Thaps22618;rank=1 chr5 . exon 493826 496165 . + . ID=Thaps22618.1;Parent=Thaps22618;constitutive=1;rank=1 chr5 . exon 490467 490522 . - . ID=Thaps28239.1;Parent=Thaps28239;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 491061 492218 . + . ID=Thaps28241;biotype=protein_coding;description=Glyceraldehyde 3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C247];external_name=GAPC3;logic_name=jgi_thaps3 chr5 ensembl transcript 491061 492218 . + . ID=Thaps28241;Parent=Thaps28241;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 491061 491104 . + 0 ID=Thaps28241;Parent=Thaps28241;rank=1 chr5 . exon 491061 491104 . + . ID=Thaps28241.1;Parent=Thaps28241;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 491252 492218 . + 0 ID=Thaps28241;Parent=Thaps28241;rank=2 chr5 . exon 491252 492218 . + . ID=Thaps28241.2;Parent=Thaps28241;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 498531 499538 . + . ID=Thaps34125;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C250];external_name=Thaps34125;logic_name=jgi_thaps3 chr5 ensembl transcript 498531 499538 . + . ID=Thaps34125;Parent=Thaps34125;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 498531 498566 . + 0 ID=Thaps34125;Parent=Thaps34125;rank=1 chr5 . exon 498531 498566 . + . ID=Thaps34125.1;Parent=Thaps34125;constitutive=1;rank=1 chr5 . CDS 498744 499538 . + 0 ID=Thaps34125;Parent=Thaps34125;rank=2 chr5 . exon 498744 499538 . + . ID=Thaps34125.2;Parent=Thaps34125;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 492543 493433 . - . ID=Thaps5161;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C248];external_name=Thaps5161;logic_name=jgi_thaps3 chr5 ensembl transcript 492543 493433 . - . ID=Thaps5161;Parent=Thaps5161;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 492543 493433 . - 0 ID=Thaps5161;Parent=Thaps5161;rank=1 chr5 . exon 492543 493433 . - . ID=Thaps5161.1;Parent=Thaps5161;constitutive=1;rank=1 chr5 . repeat_region 506236 506272 . ? . description=trf chr5 ensembl protein_coding_gene 501881 507241 . + . ID=Thaps22620;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C252];external_name=Thaps22620;logic_name=jgi_thaps3 chr5 ensembl transcript 501881 507241 . + . ID=Thaps22620;Parent=Thaps22620;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 501881 505085 . + 0 ID=Thaps22620;Parent=Thaps22620;rank=1 chr5 . exon 501881 505085 . + . ID=Thaps22620.1;Parent=Thaps22620;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 505169 505641 . + 0 ID=Thaps22620;Parent=Thaps22620;rank=2 chr5 . exon 505169 505641 . + . ID=Thaps22620.2;Parent=Thaps22620;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 505731 505941 . + 0 ID=Thaps22620;Parent=Thaps22620;rank=3 chr5 . exon 505731 505941 . + . ID=Thaps22620.3;Parent=Thaps22620;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 506030 506460 . + 0 ID=Thaps22620;Parent=Thaps22620;rank=4 chr5 . exon 506030 506460 . + . ID=Thaps22620.4;Parent=Thaps22620;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 506555 507241 . + 0 ID=Thaps22620;Parent=Thaps22620;rank=5 chr5 . exon 506555 507241 . + . ID=Thaps22620.5;Parent=Thaps22620;constitutive=1;rank=5 chr5 ensembl protein_coding_gene 507466 510087 . + . ID=Thaps22621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C253];external_name=Thaps22621;logic_name=jgi_thaps3 chr5 ensembl transcript 507466 510087 . + . ID=Thaps22621;Parent=Thaps22621;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 507466 510087 . + 0 ID=Thaps22621;Parent=Thaps22621;rank=1 chr5 . exon 507466 510087 . + . ID=Thaps22621.1;Parent=Thaps22621;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 499758 501122 . - . ID=Thaps34094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C251];external_name=Thaps34094;logic_name=jgi_thaps3 chr5 ensembl transcript 499758 501122 . - . ID=Thaps34094;Parent=Thaps34094;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 499758 500038 . - 0 ID=Thaps34094;Parent=Thaps34094;rank=7 chr5 . exon 499758 500038 . - . ID=Thaps34094.7;Parent=Thaps34094;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 500112 500189 . - 0 ID=Thaps34094;Parent=Thaps34094;rank=6 chr5 . exon 500112 500189 . - . ID=Thaps34094.6;Parent=Thaps34094;constitutive=1;rank=6 chr5 . CDS 500269 500373 . - 0 ID=Thaps34094;Parent=Thaps34094;rank=5 chr5 . exon 500269 500373 . - . ID=Thaps34094.5;Parent=Thaps34094;constitutive=1;rank=5 chr5 . CDS 500462 500696 . - 0 ID=Thaps34094;Parent=Thaps34094;rank=4 chr5 . exon 500462 500696 . - . ID=Thaps34094.4;Parent=Thaps34094;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 500794 500816 . - 0 ID=Thaps34094;Parent=Thaps34094;rank=3 chr5 . exon 500794 500816 . - . ID=Thaps34094.3;Parent=Thaps34094;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 500929 500941 . - 0 ID=Thaps34094;Parent=Thaps34094;rank=2 chr5 . exon 500929 500941 . - . ID=Thaps34094.2;Parent=Thaps34094;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 501024 501122 . - 0 ID=Thaps34094;Parent=Thaps34094;rank=1 chr5 . exon 501024 501122 . - . ID=Thaps34094.1;Parent=Thaps34094;constitutive=1;rank=1 chr5 . repeat_region 516648 516661 . ? . description=dust chr5 ensembl protein_coding_gene 513852 516598 . - . ID=Thaps22622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C256];external_name=Thaps22622;logic_name=jgi_thaps3 chr5 ensembl transcript 513852 516598 . - . ID=Thaps22622;Parent=Thaps22622;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 513852 514891 . - 0 ID=Thaps22622;Parent=Thaps22622;rank=3 chr5 . exon 513852 514891 . - . ID=Thaps22622.3;Parent=Thaps22622;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 514981 515743 . - 0 ID=Thaps22622;Parent=Thaps22622;rank=2 chr5 . exon 514981 515743 . - . ID=Thaps22622.2;Parent=Thaps22622;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 515774 516598 . - 0 ID=Thaps22622;Parent=Thaps22622;rank=1 chr5 . exon 515774 516598 . - . ID=Thaps22622.1;Parent=Thaps22622;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 517656 520318 . - . ID=Thaps22623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C257];external_name=Thaps22623;logic_name=jgi_thaps3 chr5 ensembl transcript 517656 520318 . - . ID=Thaps22623;Parent=Thaps22623;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 517656 517966 . - 0 ID=Thaps22623;Parent=Thaps22623;rank=3 chr5 . exon 517656 517966 . - . ID=Thaps22623.3;Parent=Thaps22623;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 518056 519396 . - 0 ID=Thaps22623;Parent=Thaps22623;rank=2 chr5 . exon 518056 519396 . - . ID=Thaps22623.2;Parent=Thaps22623;constitutive=1;rank=2 chr5 . CDS 520021 520318 . - 0 ID=Thaps22623;Parent=Thaps22623;rank=1 chr5 ensembl protein_coding_gene 510125 511687 . - . ID=Thaps5167;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C254];external_name=Thaps5167;logic_name=jgi_thaps3 chr5 ensembl transcript 510125 511687 . - . ID=Thaps5167;Parent=Thaps5167;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 510125 511687 . - 0 ID=Thaps5167;Parent=Thaps5167;rank=1 chr5 . exon 510125 511687 . - . ID=Thaps5167.1;Parent=Thaps5167;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 512178 513650 . + . ID=Thaps5168;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C255];external_name=Thaps5168;logic_name=jgi_thaps3 chr5 ensembl transcript 512178 513650 . + . ID=Thaps5168;Parent=Thaps5168;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 512178 513650 . + 0 ID=Thaps5168;Parent=Thaps5168;rank=1 chr5 . exon 512178 513650 . + . ID=Thaps5168.1;Parent=Thaps5168;constitutive=1;rank=1 chr5 . repeat_region 527616 527635 . ? . description=trf chr5 . repeat_region 528718 529042 . ? . description=trf chr5 . exon 520021 520318 . - . ID=Thaps22623.1;Parent=Thaps22623;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 526779 531398 . + . ID=Thaps22624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C260];external_name=Thaps22624;logic_name=jgi_thaps3 chr5 ensembl transcript 526779 531398 . + . ID=Thaps22624;Parent=Thaps22624;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 526779 529983 . + 0 ID=Thaps22624;Parent=Thaps22624;rank=1 chr5 . exon 526779 529983 . + . ID=Thaps22624.1;Parent=Thaps22624;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 530071 530574 . + 0 ID=Thaps22624;Parent=Thaps22624;rank=2 chr5 . CDS 530656 531398 . + 0 ID=Thaps22624;Parent=Thaps22624;rank=3 chr5 ensembl protein_coding_gene 520511 523605 . + . ID=Thaps5171;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C258];external_name=Thaps5171;logic_name=jgi_thaps3 chr5 ensembl transcript 520511 523605 . + . ID=Thaps5171;Parent=Thaps5171;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 520511 522263 . + 0 ID=Thaps5171;Parent=Thaps5171;rank=1 chr5 . exon 520511 522263 . + . ID=Thaps5171.1;Parent=Thaps5171;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 522362 523605 . + 0 ID=Thaps5171;Parent=Thaps5171;rank=2 chr5 . exon 522362 523605 . + . ID=Thaps5171.2;Parent=Thaps5171;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 523774 525561 . - . ID=Thaps5172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C259];external_name=Thaps5172;logic_name=jgi_thaps3 chr5 ensembl transcript 523774 525561 . - . ID=Thaps5172;Parent=Thaps5172;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 523774 525561 . - 0 ID=Thaps5172;Parent=Thaps5172;rank=1 chr5 . exon 523774 525561 . - . ID=Thaps5172.1;Parent=Thaps5172;constitutive=1;rank=1 chr5 . repeat_region 534692 534699 . ? . description=dust chr5 . exon 530071 530574 . + . ID=Thaps22624.2;Parent=Thaps22624;constitutive=1;rank=2 chr5 . exon 530656 531398 . + . ID=Thaps22624.3;Parent=Thaps22624;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 534808 539690 . + . ID=Thaps22625;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C263];external_name=Thaps22625;logic_name=jgi_thaps3 chr5 ensembl transcript 534808 539690 . + . ID=Thaps22625;Parent=Thaps22625;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 534808 534987 . + 0 ID=Thaps22625;Parent=Thaps22625;rank=1 chr5 . exon 534808 534987 . + . ID=Thaps22625.1;Parent=Thaps22625;constitutive=1;rank=1 chr5 . CDS 535092 535257 . + 0 ID=Thaps22625;Parent=Thaps22625;rank=2 chr5 . exon 535092 535257 . + . ID=Thaps22625.2;Parent=Thaps22625;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 535362 535581 . + 0 ID=Thaps22625;Parent=Thaps22625;rank=3 chr5 . exon 535362 535581 . + . ID=Thaps22625.3;Parent=Thaps22625;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 535674 536004 . + 0 ID=Thaps22625;Parent=Thaps22625;rank=4 chr5 . exon 535674 536004 . + . ID=Thaps22625.4;Parent=Thaps22625;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 536172 539690 . + 0 ID=Thaps22625;Parent=Thaps22625;rank=5 chr5 . exon 536172 539690 . + . ID=Thaps22625.5;Parent=Thaps22625;constitutive=1;rank=5 chr5 ensembl protein_coding_gene 531704 532974 . + . ID=Thaps5174;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein 8 [Source:UniProtKB/TrEMBL%3BAcc:B8C261];external_name=LHCF8;logic_name=jgi_thaps3 chr5 ensembl transcript 531704 532974 . + . ID=Thaps5174;Parent=Thaps5174;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 531704 531846 . + 0 ID=Thaps5174;Parent=Thaps5174;rank=1 chr5 . exon 531704 531846 . + . ID=Thaps5174.1;Parent=Thaps5174;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 532260 532371 . + 0 ID=Thaps5174;Parent=Thaps5174;rank=2 chr5 . exon 532260 532371 . + . ID=Thaps5174.2;Parent=Thaps5174;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 532456 532974 . + 0 ID=Thaps5174;Parent=Thaps5174;rank=3 chr5 . exon 532456 532974 . + . ID=Thaps5174.3;Parent=Thaps5174;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 533277 534329 . - . ID=Thaps5175;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C262];external_name=Thaps5175;logic_name=jgi_thaps3 chr5 ensembl transcript 533277 534329 . - . ID=Thaps5175;Parent=Thaps5175;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 533277 533795 . - 0 ID=Thaps5175;Parent=Thaps5175;rank=2 chr5 . exon 533277 533795 . - . ID=Thaps5175.2;Parent=Thaps5175;constitutive=1;rank=2 chr5 . CDS 533880 534329 . - 0 ID=Thaps5175;Parent=Thaps5175;rank=1 chr5 . exon 533880 534329 . - . ID=Thaps5175.1;Parent=Thaps5175;constitutive=1;rank=1 chr5 . repeat_region 539052 539090 . ? . description=trf chr5 . repeat_region 540150 540303 . - . description=Gypsy1LTR_TP chr5 ensembl protein_coding_gene 544277 546868 . + . ID=Thaps22627;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C266];external_name=Thaps22627;logic_name=jgi_thaps3 chr5 ensembl transcript 544277 546868 . + . ID=Thaps22627;Parent=Thaps22627;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 544277 544925 . + 0 ID=Thaps22627;Parent=Thaps22627;rank=1 chr5 . exon 544277 544925 . + . ID=Thaps22627.1;Parent=Thaps22627;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 545026 545834 . + 0 ID=Thaps22627;Parent=Thaps22627;rank=2 chr5 . exon 545026 545834 . + . ID=Thaps22627.2;Parent=Thaps22627;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 545918 546868 . + 0 ID=Thaps22627;Parent=Thaps22627;rank=3 chr5 . exon 545918 546868 . + . ID=Thaps22627.3;Parent=Thaps22627;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 548055 549341 . + . ID=Thaps22628;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C268];external_name=Thaps22628;logic_name=jgi_thaps3 chr5 ensembl transcript 548055 549341 . + . ID=Thaps22628;Parent=Thaps22628;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 548055 549341 . + 0 ID=Thaps22628;Parent=Thaps22628;rank=1 chr5 . exon 548055 549341 . + . ID=Thaps22628.1;Parent=Thaps22628;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 541880 542999 . + . ID=Thaps268857;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C264];external_name=Thaps268857;logic_name=jgi_thaps3 chr5 ensembl transcript 541880 542999 . + . ID=Thaps268857;Parent=Thaps268857;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 541880 542542 . + 0 ID=Thaps268857;Parent=Thaps268857;rank=1 chr5 . exon 541880 542542 . + . ID=Thaps268857.1;Parent=Thaps268857;constitutive=1;rank=1 chr5 . CDS 542619 542999 . + 0 ID=Thaps268857;Parent=Thaps268857;rank=2 chr5 . exon 542619 542999 . + . ID=Thaps268857.2;Parent=Thaps268857;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 543197 543985 . - . ID=Thaps5178;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C265];external_name=Thaps5178;logic_name=jgi_thaps3 chr5 ensembl transcript 543197 543985 . - . ID=Thaps5178;Parent=Thaps5178;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 543197 543985 . - 0 ID=Thaps5178;Parent=Thaps5178;rank=1 chr5 . exon 543197 543985 . - . ID=Thaps5178.1;Parent=Thaps5178;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 546941 547714 . - . ID=Thaps5180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C267];external_name=Thaps5180;logic_name=jgi_thaps3 chr5 ensembl transcript 546941 547714 . - . ID=Thaps5180;Parent=Thaps5180;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 546941 547714 . - 0 ID=Thaps5180;Parent=Thaps5180;rank=1 chr5 . exon 546941 547714 . - . ID=Thaps5180.1;Parent=Thaps5180;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 555881 557922 . - . ID=Thaps268858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C270];external_name=Thaps268858;logic_name=jgi_thaps3 chr5 ensembl transcript 555881 557922 . - . ID=Thaps268858;Parent=Thaps268858;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 555881 556032 . - 0 ID=Thaps268858;Parent=Thaps268858;rank=5 chr5 . exon 555881 556032 . - . ID=Thaps268858.5;Parent=Thaps268858;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 556118 556309 . - 0 ID=Thaps268858;Parent=Thaps268858;rank=4 chr5 . exon 556118 556309 . - . ID=Thaps268858.4;Parent=Thaps268858;constitutive=1;rank=4 chr5 . CDS 556408 557211 . - 0 ID=Thaps268858;Parent=Thaps268858;rank=3 chr5 . exon 556408 557211 . - . ID=Thaps268858.3;Parent=Thaps268858;constitutive=1;rank=3 chr5 . CDS 557313 557529 . - 0 ID=Thaps268858;Parent=Thaps268858;rank=2 chr5 . exon 557313 557529 . - . ID=Thaps268858.2;Parent=Thaps268858;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 557653 557922 . - 0 ID=Thaps268858;Parent=Thaps268858;rank=1 chr5 . exon 557653 557922 . - . ID=Thaps268858.1;Parent=Thaps268858;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 552075 555505 . + . ID=Thaps5182;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C269];external_name=Thaps5182;logic_name=jgi_thaps3 chr5 ensembl transcript 552075 555505 . + . ID=Thaps5182;Parent=Thaps5182;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 552075 552528 . + 0 ID=Thaps5182;Parent=Thaps5182;rank=1 chr5 . exon 552075 552528 . + . ID=Thaps5182.1;Parent=Thaps5182;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 552653 554991 . + 0 ID=Thaps5182;Parent=Thaps5182;rank=2 chr5 . exon 552653 554991 . + . ID=Thaps5182.2;Parent=Thaps5182;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 555074 555505 . + 0 ID=Thaps5182;Parent=Thaps5182;rank=3 chr5 . exon 555074 555505 . + . ID=Thaps5182.3;Parent=Thaps5182;constitutive=1;rank=3 chr5 . repeat_region 560240 560501 . ? . description=trf chr5 . repeat_region 560444 560527 . ? . description=trf chr5 . repeat_region 562272 562304 . + . description=scaffold_12_102_1_244538_244924 chr5 . repeat_region 562594 562797 . + . description=scaffold_10_75_1_198912_200279 chr5 ensembl protein_coding_gene 559874 561477 . - . ID=Thaps22630;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C271];external_name=Thaps22630;logic_name=jgi_thaps3 chr5 ensembl transcript 559874 561477 . - . ID=Thaps22630;Parent=Thaps22630;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 559874 560103 . - 0 ID=Thaps22630;Parent=Thaps22630;rank=4 chr5 . exon 559874 560103 . - . ID=Thaps22630.4;Parent=Thaps22630;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 560200 560887 . - 0 ID=Thaps22630;Parent=Thaps22630;rank=3 chr5 . exon 560200 560887 . - . ID=Thaps22630.3;Parent=Thaps22630;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 560967 561005 . - 0 ID=Thaps22630;Parent=Thaps22630;rank=2 chr5 . exon 560967 561005 . - . ID=Thaps22630.2;Parent=Thaps22630;constitutive=1;rank=2 chr5 . CDS 561166 561477 . - 0 ID=Thaps22630;Parent=Thaps22630;rank=1 chr5 . exon 561166 561477 . - . ID=Thaps22630.1;Parent=Thaps22630;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 568624 570903 . - . ID=Thaps22631;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C275];external_name=Thaps22631;logic_name=jgi_thaps3 chr5 ensembl transcript 568624 570903 . - . ID=Thaps22631;Parent=Thaps22631;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 568624 569770 . - 0 ID=Thaps22631;Parent=Thaps22631;rank=3 chr5 . exon 568624 569770 . - . ID=Thaps22631.3;Parent=Thaps22631;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 569831 569958 . - 0 ID=Thaps22631;Parent=Thaps22631;rank=2 chr5 . CDS 569986 570903 . - 0 ID=Thaps22631;Parent=Thaps22631;rank=1 chr5 ensembl protein_coding_gene 562272 563031 . + . ID=Thaps40669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C272];external_name=Thaps40669;logic_name=jgi_thaps3 chr5 ensembl transcript 562272 563031 . + . ID=Thaps40669;Parent=Thaps40669;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 562272 562299 . + 0 ID=Thaps40669;Parent=Thaps40669;rank=1 chr5 . exon 562272 562299 . + . ID=Thaps40669.1;Parent=Thaps40669;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 562598 563031 . + 0 ID=Thaps40669;Parent=Thaps40669;rank=2 chr5 . exon 562598 563031 . + . ID=Thaps40669.2;Parent=Thaps40669;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 564071 565965 . + . ID=Thaps5185;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C273];external_name=Thaps5185;logic_name=jgi_thaps3 chr5 ensembl transcript 564071 565965 . + . ID=Thaps5185;Parent=Thaps5185;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 564071 564643 . + 0 ID=Thaps5185;Parent=Thaps5185;rank=1 chr5 . exon 564071 564643 . + . ID=Thaps5185.1;Parent=Thaps5185;constitutive=1;rank=1 chr5 . CDS 564718 564856 . + 0 ID=Thaps5185;Parent=Thaps5185;rank=2 chr5 . exon 564718 564856 . + . ID=Thaps5185.2;Parent=Thaps5185;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 565001 565965 . + 0 ID=Thaps5185;Parent=Thaps5185;rank=3 chr5 . exon 565001 565965 . + . ID=Thaps5185.3;Parent=Thaps5185;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 566357 568410 . + . ID=Thaps5186;biotype=protein_coding;description=Phosphoenolpyruvate carboxykinase [Source:UniProtKB/TrEMBL%3BAcc:B8C274];external_name=PCK1;logic_name=jgi_thaps3 chr5 ensembl transcript 566357 568410 . + . ID=Thaps5186;Parent=Thaps5186;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 566357 566527 . + 0 ID=Thaps5186;Parent=Thaps5186;rank=1 chr5 . exon 566357 566527 . + . ID=Thaps5186.1;Parent=Thaps5186;constitutive=1;rank=1 chr5 . CDS 566706 567858 . + 0 ID=Thaps5186;Parent=Thaps5186;rank=2 chr5 . exon 566706 567858 . + . ID=Thaps5186.2;Parent=Thaps5186;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 567878 568410 . + 0 ID=Thaps5186;Parent=Thaps5186;rank=3 chr5 . exon 567878 568410 . + . ID=Thaps5186.3;Parent=Thaps5186;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . exon 569831 569958 . - . ID=Thaps22631.2;Parent=Thaps22631;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 569986 570903 . - . ID=Thaps22631.1;Parent=Thaps22631;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 572873 574126 . - . ID=Thaps268859;biotype=protein_coding;description=Probable beta subunit of type II geranylgeranyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8C277];external_name=GGTB1;logic_name=jgi_thaps3 chr5 ensembl transcript 572873 574126 . - . ID=Thaps268859;Parent=Thaps268859;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 572873 573542 . - 0 ID=Thaps268859;Parent=Thaps268859;rank=3 chr5 . exon 572873 573542 . - . ID=Thaps268859.3;Parent=Thaps268859;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 573585 573893 . - 0 ID=Thaps268859;Parent=Thaps268859;rank=2 chr5 . exon 573585 573893 . - . ID=Thaps268859.2;Parent=Thaps268859;constitutive=1;rank=2 chr5 . CDS 573927 574126 . - 0 ID=Thaps268859;Parent=Thaps268859;rank=1 chr5 . exon 573927 574126 . - . ID=Thaps268859.1;Parent=Thaps268859;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 574558 575697 . + . ID=Thaps454;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C278];external_name=Thaps454;logic_name=jgi_thaps3 chr5 ensembl transcript 574558 575697 . + . ID=Thaps454;Parent=Thaps454;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 574558 575697 . + 0 ID=Thaps454;Parent=Thaps454;rank=1 chr5 . exon 574558 575697 . + . ID=Thaps454.1;Parent=Thaps454;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 571414 572513 . + . ID=Thaps5188;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C276];external_name=Thaps5188;logic_name=jgi_thaps3 chr5 ensembl transcript 571414 572513 . + . ID=Thaps5188;Parent=Thaps5188;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 571414 571688 . + 0 ID=Thaps5188;Parent=Thaps5188;rank=1 chr5 . exon 571414 571688 . + . ID=Thaps5188.1;Parent=Thaps5188;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 571764 571839 . + 0 ID=Thaps5188;Parent=Thaps5188;rank=2 chr5 . exon 571764 571839 . + . ID=Thaps5188.2;Parent=Thaps5188;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 571944 572513 . + 0 ID=Thaps5188;Parent=Thaps5188;rank=3 chr5 . exon 571944 572513 . + . ID=Thaps5188.3;Parent=Thaps5188;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 575818 577062 . + . ID=Thaps5191;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C279];external_name=Thaps5191;logic_name=jgi_thaps3 chr5 ensembl transcript 575818 577062 . + . ID=Thaps5191;Parent=Thaps5191;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 575818 577062 . + 0 ID=Thaps5191;Parent=Thaps5191;rank=1 chr5 . exon 575818 577062 . + . ID=Thaps5191.1;Parent=Thaps5191;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 577930 578997 . - . ID=Thaps5192;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C280];external_name=Thaps5192;logic_name=jgi_thaps3 chr5 ensembl transcript 577930 578997 . - . ID=Thaps5192;Parent=Thaps5192;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 577930 578997 . - 0 ID=Thaps5192;Parent=Thaps5192;rank=1 chr5 . exon 577930 578997 . - . ID=Thaps5192.1;Parent=Thaps5192;constitutive=1;rank=1 chr5 . biological_region 585152 585152 0.999 - . logic_name=eponine chr5 ensembl protein_coding_gene 586414 587396 . - . ID=Thaps16384;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C284];external_name=Thaps16384;logic_name=jgi_thaps3 chr5 ensembl transcript 586414 587396 . - . ID=Thaps16384;Parent=Thaps16384;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 586414 586477 . - 0 ID=Thaps16384;Parent=Thaps16384;rank=4 chr5 . exon 586414 586477 . - . ID=Thaps16384.4;Parent=Thaps16384;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 586567 586707 . - 0 ID=Thaps16384;Parent=Thaps16384;rank=3 chr5 . exon 586567 586707 . - . ID=Thaps16384.3;Parent=Thaps16384;constitutive=1;rank=3 chr5 . CDS 586870 587198 . - 0 ID=Thaps16384;Parent=Thaps16384;rank=2 chr5 . exon 586870 587198 . - . ID=Thaps16384.2;Parent=Thaps16384;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 587298 587396 . - 0 ID=Thaps16384;Parent=Thaps16384;rank=1 chr5 . exon 587298 587396 . - . ID=Thaps16384.1;Parent=Thaps16384;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 587769 588485 . + . ID=Thaps22634;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C285];external_name=Thaps22634;logic_name=jgi_thaps3 chr5 ensembl transcript 587769 588485 . + . ID=Thaps22634;Parent=Thaps22634;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 587769 588485 . + 0 ID=Thaps22634;Parent=Thaps22634;rank=1 chr5 . exon 587769 588485 . + . ID=Thaps22634.1;Parent=Thaps22634;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 585070 585477 . + . ID=Thaps34055;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C283];external_name=Thaps34055;logic_name=jgi_thaps3 chr5 ensembl transcript 585070 585477 . + . ID=Thaps34055;Parent=Thaps34055;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 585070 585477 . + 0 ID=Thaps34055;Parent=Thaps34055;rank=1 chr5 . exon 585070 585477 . + . ID=Thaps34055.1;Parent=Thaps34055;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 582536 583717 . + . ID=Thaps40675;biotype=protein_coding;description=UDP-glucose 4-epimerase [Source:UniProtKB/TrEMBL%3BAcc:B8C282];external_name=GALE2;logic_name=jgi_thaps3 chr5 ensembl transcript 582536 583717 . + . ID=Thaps40675;Parent=Thaps40675;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 582536 582720 . + 0 ID=Thaps40675;Parent=Thaps40675;rank=1 chr5 . exon 582536 582720 . + . ID=Thaps40675.1;Parent=Thaps40675;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 582757 583717 . + 0 ID=Thaps40675;Parent=Thaps40675;rank=2 chr5 . exon 582757 583717 . + . ID=Thaps40675.2;Parent=Thaps40675;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 580565 581800 . - . ID=Thaps5193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C281];external_name=Thaps5193;logic_name=jgi_thaps3 chr5 ensembl transcript 580565 581800 . - . ID=Thaps5193;Parent=Thaps5193;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 580565 581124 . - 0 ID=Thaps5193;Parent=Thaps5193;rank=2 chr5 . exon 580565 581124 . - . ID=Thaps5193.2;Parent=Thaps5193;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 581395 581800 . - 0 ID=Thaps5193;Parent=Thaps5193;rank=1 chr5 . exon 581395 581800 . - . ID=Thaps5193.1;Parent=Thaps5193;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 595164 595202 . ? . description=dust chr5 . repeat_region 596586 596626 . ? . description=trf chr5 ensembl protein_coding_gene 593409 602167 . + . ID=Thaps22635;biotype=protein_coding;description=SAR DNA-binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8C288];external_name=Thaps22635;logic_name=jgi_thaps3 chr5 ensembl transcript 593409 602167 . + . ID=Thaps22635;Parent=Thaps22635;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 593409 593453 . + 0 ID=Thaps22635;Parent=Thaps22635;rank=1 chr5 . exon 593409 593453 . + . ID=Thaps22635.1;Parent=Thaps22635;constitutive=1;rank=1 chr5 . CDS 593702 594290 . + 0 ID=Thaps22635;Parent=Thaps22635;rank=2 chr5 . exon 593702 594290 . + . ID=Thaps22635.2;Parent=Thaps22635;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 594377 595026 . + 0 ID=Thaps22635;Parent=Thaps22635;rank=3 chr5 . exon 594377 595026 . + . ID=Thaps22635.3;Parent=Thaps22635;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 602135 602167 . + 0 ID=Thaps22635;Parent=Thaps22635;rank=4 chr5 ensembl protein_coding_gene 589502 590686 . + . ID=Thaps5197;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C286];external_name=Thaps5197;logic_name=jgi_thaps3 chr5 ensembl transcript 589502 590686 . + . ID=Thaps5197;Parent=Thaps5197;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 589502 590686 . + 0 ID=Thaps5197;Parent=Thaps5197;rank=1 chr5 . exon 589502 590686 . + . ID=Thaps5197.1;Parent=Thaps5197;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 591134 591577 . - . ID=Thaps5198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C287];external_name=Thaps5198;logic_name=jgi_thaps3 chr5 ensembl transcript 591134 591577 . - . ID=Thaps5198;Parent=Thaps5198;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 591134 591577 . - 0 ID=Thaps5198;Parent=Thaps5198;rank=1 chr5 . exon 591134 591577 . - . ID=Thaps5198.1;Parent=Thaps5198;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 605346 606290 . - . ID=Thaps16136;biotype=protein_coding;description=Peptide chain release factor 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C291];external_name=Thaps16136;logic_name=jgi_thaps3 chr5 ensembl transcript 605346 606290 . - . ID=Thaps16136;Parent=Thaps16136;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 605346 605855 . - 0 ID=Thaps16136;Parent=Thaps16136;rank=2 chr5 . exon 605346 605855 . - . ID=Thaps16136.2;Parent=Thaps16136;constitutive=1;rank=2 chr5 . CDS 605955 606290 . - 0 ID=Thaps16136;Parent=Thaps16136;rank=1 chr5 . exon 605955 606290 . - . ID=Thaps16136.1;Parent=Thaps16136;constitutive=1;rank=1 chr5 . exon 602135 602167 . + . ID=Thaps22635.4;Parent=Thaps22635;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 602191 602814 . + . ID=Thaps34280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C289];external_name=Thaps34280;logic_name=jgi_thaps3 chr5 ensembl transcript 602191 602814 . + . ID=Thaps34280;Parent=Thaps34280;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 602191 602814 . + 0 ID=Thaps34280;Parent=Thaps34280;rank=1 chr5 . exon 602191 602814 . + . ID=Thaps34280.1;Parent=Thaps34280;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 607318 608574 . + . ID=Thaps34295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C292];external_name=Thaps34295;logic_name=jgi_thaps3 chr5 ensembl transcript 607318 608574 . + . ID=Thaps34295;Parent=Thaps34295;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 607318 607727 . + 0 ID=Thaps34295;Parent=Thaps34295;rank=1 chr5 . exon 607318 607727 . + . ID=Thaps34295.1;Parent=Thaps34295;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 607794 608574 . + 0 ID=Thaps34295;Parent=Thaps34295;rank=2 chr5 . exon 607794 608574 . + . ID=Thaps34295.2;Parent=Thaps34295;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 602997 604640 . - . ID=Thaps5201;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C290];external_name=Thaps5201;logic_name=jgi_thaps3 chr5 ensembl transcript 602997 604640 . - . ID=Thaps5201;Parent=Thaps5201;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 602997 604640 . - 0 ID=Thaps5201;Parent=Thaps5201;rank=1 chr5 . exon 602997 604640 . - . ID=Thaps5201.1;Parent=Thaps5201;constitutive=1;rank=1 chr5 . repeat_region 615882 615944 . ? . description=dust chr5 ensembl protein_coding_gene 612925 616441 . - . ID=Thaps22637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C295];external_name=Thaps22637;logic_name=jgi_thaps3 chr5 ensembl transcript 612925 616441 . - . ID=Thaps22637;Parent=Thaps22637;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 612925 613359 . - 0 ID=Thaps22637;Parent=Thaps22637;rank=2 chr5 . exon 612925 613359 . - . ID=Thaps22637.2;Parent=Thaps22637;constitutive=1;rank=2 chr5 . CDS 613439 616441 . - 0 ID=Thaps22637;Parent=Thaps22637;rank=1 chr5 . exon 613439 616441 . - . ID=Thaps22637.1;Parent=Thaps22637;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 618514 619119 . - . ID=Thaps22639;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C297];external_name=Thaps22639;logic_name=jgi_thaps3 chr5 ensembl transcript 618514 619119 . - . ID=Thaps22639;Parent=Thaps22639;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 618514 619119 . - 0 ID=Thaps22639;Parent=Thaps22639;rank=1 chr5 . exon 618514 619119 . - . ID=Thaps22639.1;Parent=Thaps22639;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 616940 618207 . + . ID=Thaps34021;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C296];external_name=Thaps34021;logic_name=jgi_thaps3 chr5 ensembl transcript 616940 618207 . + . ID=Thaps34021;Parent=Thaps34021;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 616940 617131 . + 0 ID=Thaps34021;Parent=Thaps34021;rank=1 chr5 . exon 616940 617131 . + . ID=Thaps34021.1;Parent=Thaps34021;constitutive=1;rank=1 chr5 . CDS 617246 617535 . + 0 ID=Thaps34021;Parent=Thaps34021;rank=2 chr5 . exon 617246 617535 . + . ID=Thaps34021.2;Parent=Thaps34021;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 617614 618048 . + 0 ID=Thaps34021;Parent=Thaps34021;rank=3 chr5 . exon 617614 618048 . + . ID=Thaps34021.3;Parent=Thaps34021;constitutive=1;rank=3 chr5 . CDS 618141 618207 . + 0 ID=Thaps34021;Parent=Thaps34021;rank=4 chr5 . exon 618141 618207 . + . ID=Thaps34021.4;Parent=Thaps34021;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 611001 611705 . + . ID=Thaps5204;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C293];external_name=Thaps5204;logic_name=jgi_thaps3 chr5 ensembl transcript 611001 611705 . + . ID=Thaps5204;Parent=Thaps5204;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 611001 611029 . + 0 ID=Thaps5204;Parent=Thaps5204;rank=1 chr5 . exon 611001 611029 . + . ID=Thaps5204.1;Parent=Thaps5204;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 611414 611705 . + 0 ID=Thaps5204;Parent=Thaps5204;rank=2 chr5 . exon 611414 611705 . + . ID=Thaps5204.2;Parent=Thaps5204;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 612134 612634 . - . ID=Thaps5205;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C294];external_name=Thaps5205;logic_name=jgi_thaps3 chr5 ensembl transcript 612134 612634 . - . ID=Thaps5205;Parent=Thaps5205;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 612134 612634 . - 0 ID=Thaps5205;Parent=Thaps5205;rank=1 chr5 . exon 612134 612634 . - . ID=Thaps5205.1;Parent=Thaps5205;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 623195 623569 . + . ID=Thaps22640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2A0];external_name=Thaps22640;logic_name=jgi_thaps3 chr5 ensembl transcript 623195 623569 . + . ID=Thaps22640;Parent=Thaps22640;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 623195 623569 . + 0 ID=Thaps22640;Parent=Thaps22640;rank=1 chr5 . exon 623195 623569 . + . ID=Thaps22640.1;Parent=Thaps22640;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 627176 627817 . - . ID=Thaps262455;biotype=protein_coding;description=Hemolysin ii-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2A2];external_name=Thaps262455;logic_name=jgi_thaps3 chr5 ensembl transcript 627176 627817 . - . ID=Thaps262455;Parent=Thaps262455;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 627176 627817 . - 0 ID=Thaps262455;Parent=Thaps262455;rank=1 chr5 . exon 627176 627817 . - . ID=Thaps262455.1;Parent=Thaps262455;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 620288 622236 . + . ID=Thaps5209;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C298];external_name=Thaps5209;logic_name=jgi_thaps3 chr5 ensembl transcript 620288 622236 . + . ID=Thaps5209;Parent=Thaps5209;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 620288 621550 . + 0 ID=Thaps5209;Parent=Thaps5209;rank=1 chr5 . exon 620288 621550 . + . ID=Thaps5209.1;Parent=Thaps5209;constitutive=1;rank=1 chr5 . CDS 621637 622236 . + 0 ID=Thaps5209;Parent=Thaps5209;rank=2 chr5 . exon 621637 622236 . + . ID=Thaps5209.2;Parent=Thaps5209;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 622456 622797 . - . ID=Thaps5210;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C299];external_name=Thaps5210;logic_name=jgi_thaps3 chr5 ensembl transcript 622456 622797 . - . ID=Thaps5210;Parent=Thaps5210;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 622456 622797 . - 0 ID=Thaps5210;Parent=Thaps5210;rank=1 chr5 . exon 622456 622797 . - . ID=Thaps5210.1;Parent=Thaps5210;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 625332 627002 . + . ID=Thaps5212;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2A1];external_name=Thaps5212;logic_name=jgi_thaps3 chr5 ensembl transcript 625332 627002 . + . ID=Thaps5212;Parent=Thaps5212;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 625332 627002 . + 0 ID=Thaps5212;Parent=Thaps5212;rank=1 chr5 . exon 625332 627002 . + . ID=Thaps5212.1;Parent=Thaps5212;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 637403 639115 . + . ID=Thaps22642;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2A5];external_name=Thaps22642;logic_name=jgi_thaps3 chr5 ensembl transcript 637403 639115 . + . ID=Thaps22642;Parent=Thaps22642;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 637403 637654 . + 0 ID=Thaps22642;Parent=Thaps22642;rank=1 chr5 . exon 637403 637654 . + . ID=Thaps22642.1;Parent=Thaps22642;constitutive=1;rank=1 chr5 . CDS 637782 639037 . + 0 ID=Thaps22642;Parent=Thaps22642;rank=2 chr5 . exon 637782 639037 . + . ID=Thaps22642.2;Parent=Thaps22642;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 639091 639115 . + 0 ID=Thaps22642;Parent=Thaps22642;rank=3 chr5 ensembl protein_coding_gene 635958 636650 . - . ID=Thaps262457;biotype=protein_coding;description=Cytochrome oxidase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2A4];external_name=Thaps262457;logic_name=jgi_thaps3 chr5 ensembl transcript 635958 636650 . - . ID=Thaps262457;Parent=Thaps262457;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 635958 636650 . - 0 ID=Thaps262457;Parent=Thaps262457;rank=1 chr5 . exon 635958 636650 . - . ID=Thaps262457.1;Parent=Thaps262457;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 630356 635653 . + . ID=Thaps268862;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2A3];external_name=Thaps268862;logic_name=jgi_thaps3 chr5 ensembl transcript 630356 635653 . + . ID=Thaps268862;Parent=Thaps268862;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 630356 630723 . + 0 ID=Thaps268862;Parent=Thaps268862;rank=1 chr5 . exon 630356 630723 . + . ID=Thaps268862.1;Parent=Thaps268862;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 630829 631317 . + 0 ID=Thaps268862;Parent=Thaps268862;rank=2 chr5 . exon 630829 631317 . + . ID=Thaps268862.2;Parent=Thaps268862;constitutive=1;rank=2 chr5 . CDS 631375 631948 . + 0 ID=Thaps268862;Parent=Thaps268862;rank=3 chr5 . exon 631375 631948 . + . ID=Thaps268862.3;Parent=Thaps268862;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 632036 632324 . + 0 ID=Thaps268862;Parent=Thaps268862;rank=4 chr5 . exon 632036 632324 . + . ID=Thaps268862.4;Parent=Thaps268862;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 632358 632512 . + 0 ID=Thaps268862;Parent=Thaps268862;rank=5 chr5 . exon 632358 632512 . + . ID=Thaps268862.5;Parent=Thaps268862;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 632579 632699 . + 0 ID=Thaps268862;Parent=Thaps268862;rank=6 chr5 . exon 632579 632699 . + . ID=Thaps268862.6;Parent=Thaps268862;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 632763 633353 . + 0 ID=Thaps268862;Parent=Thaps268862;rank=7 chr5 . exon 632763 633353 . + . ID=Thaps268862.7;Parent=Thaps268862;constitutive=1;rank=7 chr5 . CDS 633450 635157 . + 0 ID=Thaps268862;Parent=Thaps268862;rank=8 chr5 . exon 633450 635157 . + . ID=Thaps268862.8;Parent=Thaps268862;constitutive=1;ensembl_end_phase=1;rank=8 chr5 . CDS 635245 635653 . + 0 ID=Thaps268862;Parent=Thaps268862;rank=9 chr5 . exon 635245 635653 . + . ID=Thaps268862.9;Parent=Thaps268862;constitutive=1;ensembl_end_phase=1;rank=9 chr5 . repeat_region 640908 641011 . + . description=MuDR1_TP chr5 . repeat_region 644661 644708 . ? . description=trf chr5 . exon 639091 639115 . + . ID=Thaps22642.3;Parent=Thaps22642;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 645215 647496 . + . ID=Thaps22643;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2A8];external_name=Thaps22643;logic_name=jgi_thaps3 chr5 ensembl transcript 645215 647496 . + . ID=Thaps22643;Parent=Thaps22643;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 645215 646772 . + 0 ID=Thaps22643;Parent=Thaps22643;rank=1 chr5 . exon 645215 646772 . + . ID=Thaps22643.1;Parent=Thaps22643;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 646856 647496 . + 0 ID=Thaps22643;Parent=Thaps22643;rank=2 chr5 . exon 646856 647496 . + . ID=Thaps22643.2;Parent=Thaps22643;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 639439 641447 . - . ID=Thaps5216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2A6];external_name=Thaps5216;logic_name=jgi_thaps3 chr5 ensembl transcript 639439 641447 . - . ID=Thaps5216;Parent=Thaps5216;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 639439 640844 . - 0 ID=Thaps5216;Parent=Thaps5216;rank=2 chr5 . exon 639439 640844 . - . ID=Thaps5216.2;Parent=Thaps5216;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 641063 641447 . - 0 ID=Thaps5216;Parent=Thaps5216;rank=1 chr5 . exon 641063 641447 . - . ID=Thaps5216.1;Parent=Thaps5216;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 642925 644662 . + . ID=Thaps5217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2A7];external_name=Thaps5217;logic_name=jgi_thaps3 chr5 ensembl transcript 642925 644662 . + . ID=Thaps5217;Parent=Thaps5217;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 642925 644088 . + 0 ID=Thaps5217;Parent=Thaps5217;rank=1 chr5 . exon 642925 644088 . + . ID=Thaps5217.1;Parent=Thaps5217;constitutive=1;rank=1 chr5 . CDS 644162 644362 . + 0 ID=Thaps5217;Parent=Thaps5217;rank=2 chr5 . exon 644162 644362 . + . ID=Thaps5217.2;Parent=Thaps5217;constitutive=1;rank=2 chr5 . CDS 644474 644537 . + 0 ID=Thaps5217;Parent=Thaps5217;rank=3 chr5 . exon 644474 644537 . + . ID=Thaps5217.3;Parent=Thaps5217;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 644601 644662 . + 0 ID=Thaps5217;Parent=Thaps5217;rank=4 chr5 . exon 644601 644662 . + . ID=Thaps5217.4;Parent=Thaps5217;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 647877 649165 . - . ID=Thaps5219;biotype=protein_coding;description=Malonyl coa-acyl carrier protein transacylase [Source:UniProtKB/TrEMBL%3BAcc:B8C2A9];external_name=MCT1;logic_name=jgi_thaps3 chr5 ensembl transcript 647877 649165 . - . ID=Thaps5219;Parent=Thaps5219;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 647877 648788 . - 0 ID=Thaps5219;Parent=Thaps5219;rank=2 chr5 . exon 647877 648788 . - . ID=Thaps5219.2;Parent=Thaps5219;constitutive=1;rank=2 chr5 . CDS 649007 649165 . - 0 ID=Thaps5219;Parent=Thaps5219;rank=1 chr5 . repeat_region 658003 658012 . ? . description=dust chr5 ensembl protein_coding_gene 653005 654315 . + . ID=Thaps22644;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2B2];external_name=Thaps22644;logic_name=jgi_thaps3 chr5 ensembl transcript 653005 654315 . + . ID=Thaps22644;Parent=Thaps22644;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 653005 654315 . + 0 ID=Thaps22644;Parent=Thaps22644;rank=1 chr5 . exon 653005 654315 . + . ID=Thaps22644.1;Parent=Thaps22644;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 655431 657158 . - . ID=Thaps262459;biotype=protein_coding;description=Dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C2B4];external_name=Thaps262459;logic_name=jgi_thaps3 chr5 ensembl transcript 655431 657158 . - . ID=Thaps262459;Parent=Thaps262459;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 655431 655548 . - 0 ID=Thaps262459;Parent=Thaps262459;rank=7 chr5 . exon 655431 655548 . - . ID=Thaps262459.7;Parent=Thaps262459;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 655597 655909 . - 0 ID=Thaps262459;Parent=Thaps262459;rank=6 chr5 . exon 655597 655909 . - . ID=Thaps262459.6;Parent=Thaps262459;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 655958 656518 . - 0 ID=Thaps262459;Parent=Thaps262459;rank=5 chr5 . exon 655958 656518 . - . ID=Thaps262459.5;Parent=Thaps262459;constitutive=1;rank=5 chr5 . CDS 656615 656700 . - 0 ID=Thaps262459;Parent=Thaps262459;rank=4 chr5 . exon 656615 656700 . - . ID=Thaps262459.4;Parent=Thaps262459;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 656903 656935 . - 0 ID=Thaps262459;Parent=Thaps262459;rank=3 chr5 . exon 656903 656935 . - . ID=Thaps262459.3;Parent=Thaps262459;constitutive=1;rank=3 chr5 . CDS 657012 657024 . - 0 ID=Thaps262459;Parent=Thaps262459;rank=2 chr5 . exon 657012 657024 . - . ID=Thaps262459.2;Parent=Thaps262459;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 657057 657158 . - 0 ID=Thaps262459;Parent=Thaps262459;rank=1 chr5 . exon 657057 657158 . - . ID=Thaps262459.1;Parent=Thaps262459;constitutive=1;rank=1 chr5 . exon 649007 649165 . - . ID=Thaps5219.1;Parent=Thaps5219;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 649379 649705 . + . ID=Thaps5220;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2B0];external_name=Thaps5220;logic_name=jgi_thaps3 chr5 ensembl transcript 649379 649705 . + . ID=Thaps5220;Parent=Thaps5220;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 649379 649705 . + 0 ID=Thaps5220;Parent=Thaps5220;rank=1 chr5 . exon 649379 649705 . + . ID=Thaps5220.1;Parent=Thaps5220;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 650571 652675 . - . ID=Thaps5221;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2B1];external_name=Thaps5221;logic_name=jgi_thaps3 chr5 ensembl transcript 650571 652675 . - . ID=Thaps5221;Parent=Thaps5221;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 650571 650680 . - 0 ID=Thaps5221;Parent=Thaps5221;rank=2 chr5 . exon 650571 650680 . - . ID=Thaps5221.2;Parent=Thaps5221;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 650770 652675 . - 0 ID=Thaps5221;Parent=Thaps5221;rank=1 chr5 . exon 650770 652675 . - . ID=Thaps5221.1;Parent=Thaps5221;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 654569 655201 . + . ID=Thaps5223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2B3];external_name=Thaps5223;logic_name=jgi_thaps3 chr5 ensembl transcript 654569 655201 . + . ID=Thaps5223;Parent=Thaps5223;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 654569 655201 . + 0 ID=Thaps5223;Parent=Thaps5223;rank=1 chr5 . exon 654569 655201 . + . ID=Thaps5223.1;Parent=Thaps5223;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 657545 657975 . + . ID=Thaps5224;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2B5];external_name=Thaps5224;logic_name=jgi_thaps3 chr5 ensembl transcript 657545 657975 . + . ID=Thaps5224;Parent=Thaps5224;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 657545 657620 . + 0 ID=Thaps5224;Parent=Thaps5224;rank=1 chr5 . exon 657545 657620 . + . ID=Thaps5224.1;Parent=Thaps5224;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 657704 657975 . + 0 ID=Thaps5224;Parent=Thaps5224;rank=2 chr5 . exon 657704 657975 . + . ID=Thaps5224.2;Parent=Thaps5224;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 658169 659805 . - . ID=Thaps5225;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2B6];external_name=Thaps5225;logic_name=jgi_thaps3 chr5 ensembl transcript 658169 659805 . - . ID=Thaps5225;Parent=Thaps5225;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 658169 659265 . - 0 ID=Thaps5225;Parent=Thaps5225;rank=2 chr5 . exon 658169 659265 . - . ID=Thaps5225.2;Parent=Thaps5225;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 659484 659805 . - 0 ID=Thaps5225;Parent=Thaps5225;rank=1 chr5 . repeat_region 659588 659730 . ? . description=trf chr5 ensembl protein_coding_gene 663581 664755 . + . ID=Thaps22645;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2B8];external_name=Thaps22645;logic_name=jgi_thaps3 chr5 ensembl transcript 663581 664755 . + . ID=Thaps22645;Parent=Thaps22645;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 663581 663854 . + 0 ID=Thaps22645;Parent=Thaps22645;rank=1 chr5 . exon 663581 663854 . + . ID=Thaps22645.1;Parent=Thaps22645;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 664010 664755 . + 0 ID=Thaps22645;Parent=Thaps22645;rank=2 chr5 . exon 664010 664755 . + . ID=Thaps22645.2;Parent=Thaps22645;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 665780 668471 . - . ID=Thaps268863;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C2B9];external_name=Thaps268863;logic_name=jgi_thaps3 chr5 ensembl transcript 665780 668471 . - . ID=Thaps268863;Parent=Thaps268863;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 665780 666034 . - 0 ID=Thaps268863;Parent=Thaps268863;rank=8 chr5 . exon 665780 666034 . - . ID=Thaps268863.8;Parent=Thaps268863;constitutive=1;rank=8 chr5 . CDS 666117 666199 . - 0 ID=Thaps268863;Parent=Thaps268863;rank=7 chr5 . exon 666117 666199 . - . ID=Thaps268863.7;Parent=Thaps268863;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 666297 666409 . - 0 ID=Thaps268863;Parent=Thaps268863;rank=6 chr5 . exon 666297 666409 . - . ID=Thaps268863.6;Parent=Thaps268863;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 666449 666759 . - 0 ID=Thaps268863;Parent=Thaps268863;rank=5 chr5 . exon 666449 666759 . - . ID=Thaps268863.5;Parent=Thaps268863;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 666841 667050 . - 0 ID=Thaps268863;Parent=Thaps268863;rank=4 chr5 . exon 666841 667050 . - . ID=Thaps268863.4;Parent=Thaps268863;constitutive=1;rank=4 chr5 . CDS 667132 667632 . - 0 ID=Thaps268863;Parent=Thaps268863;rank=3 chr5 . exon 667132 667632 . - . ID=Thaps268863.3;Parent=Thaps268863;constitutive=1;rank=3 chr5 . CDS 667720 667822 . - 0 ID=Thaps268863;Parent=Thaps268863;rank=2 chr5 . exon 667720 667822 . - . ID=Thaps268863.2;Parent=Thaps268863;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 667918 668471 . - 0 ID=Thaps268863;Parent=Thaps268863;rank=1 chr5 . exon 667918 668471 . - . ID=Thaps268863.1;Parent=Thaps268863;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 668712 670085 . - . ID=Thaps34227;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2C0];external_name=Thaps34227;logic_name=jgi_thaps3 chr5 ensembl transcript 668712 670085 . - . ID=Thaps34227;Parent=Thaps34227;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 668712 669866 . - 0 ID=Thaps34227;Parent=Thaps34227;rank=2 chr5 . exon 668712 669866 . - . ID=Thaps34227.2;Parent=Thaps34227;constitutive=1;rank=2 chr5 . CDS 669969 670085 . - 0 ID=Thaps34227;Parent=Thaps34227;rank=1 chr5 ensembl protein_coding_gene 662235 663165 . + . ID=Thaps34511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2B7];external_name=Thaps34511;logic_name=jgi_thaps3 chr5 ensembl transcript 662235 663165 . + . ID=Thaps34511;Parent=Thaps34511;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 662235 662397 . + 0 ID=Thaps34511;Parent=Thaps34511;rank=1 chr5 . exon 662235 662397 . + . ID=Thaps34511.1;Parent=Thaps34511;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 662501 662553 . + 0 ID=Thaps34511;Parent=Thaps34511;rank=2 chr5 . exon 662501 662553 . + . ID=Thaps34511.2;Parent=Thaps34511;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 662635 663165 . + 0 ID=Thaps34511;Parent=Thaps34511;rank=3 chr5 . exon 662635 663165 . + . ID=Thaps34511.3;Parent=Thaps34511;constitutive=1;rank=3 chr5 . exon 659484 659805 . - . ID=Thaps5225.1;Parent=Thaps5225;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 672192 672199 . ? . description=dust chr5 . biological_region 672415 672415 0.999 - . logic_name=eponine chr5 . repeat_region 672450 672457 . ? . description=dust chr5 . repeat_region 673387 673394 . ? . description=dust chr5 ensembl protein_coding_gene 672689 675253 . + . ID=Thaps22648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2C1];external_name=Thaps22648;logic_name=jgi_thaps3 chr5 ensembl transcript 672689 675253 . + . ID=Thaps22648;Parent=Thaps22648;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 672689 672941 . + 0 ID=Thaps22648;Parent=Thaps22648;rank=1 chr5 . exon 672689 672941 . + . ID=Thaps22648.1;Parent=Thaps22648;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 673083 675253 . + 0 ID=Thaps22648;Parent=Thaps22648;rank=2 chr5 . exon 673083 675253 . + . ID=Thaps22648.2;Parent=Thaps22648;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 669969 670085 . - . ID=Thaps34227.1;Parent=Thaps34227;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 676305 677267 . - . ID=Thaps5232;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2C2];external_name=Thaps5232;logic_name=jgi_thaps3 chr5 ensembl transcript 676305 677267 . - . ID=Thaps5232;Parent=Thaps5232;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 676305 676952 . - 0 ID=Thaps5232;Parent=Thaps5232;rank=2 chr5 . exon 676305 676952 . - . ID=Thaps5232.2;Parent=Thaps5232;constitutive=1;rank=2 chr5 . CDS 677058 677267 . - 0 ID=Thaps5232;Parent=Thaps5232;rank=1 chr5 . exon 677058 677267 . - . ID=Thaps5232.1;Parent=Thaps5232;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 677818 679644 . + . ID=Thaps5233;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2C3];external_name=Thaps5233;logic_name=jgi_thaps3 chr5 ensembl transcript 677818 679644 . + . ID=Thaps5233;Parent=Thaps5233;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 677818 679644 . + 0 ID=Thaps5233;Parent=Thaps5233;rank=1 chr5 . exon 677818 679644 . + . ID=Thaps5233.1;Parent=Thaps5233;constitutive=1;rank=1 chr5 ensembl snoRNA_gene 684591 684705 . + . ID=EPrTPOG00000000026;biotype=snoRNA;description=Small nucleolar RNA SNORD15 [Source:RFAM%3BAcc:RF00067];external_name=SNORD15;logic_name=ncrna_eg chr5 ensembl snoRNA 684591 684705 . + . ID=EPrTPOT00000000005;Parent=EPrTPOG00000000026;biotype=snoRNA;logic_name=ncrna_eg chr5 . exon 684591 684705 . + . ID=EPrTPOE00000000026;Parent=EPrTPOT00000000005;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 681409 682093 . + . ID=Thaps17841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2C5];external_name=Thaps17841;logic_name=jgi_thaps3 chr5 ensembl transcript 681409 682093 . + . ID=Thaps17841;Parent=Thaps17841;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 681409 681635 . + 0 ID=Thaps17841;Parent=Thaps17841;rank=1 chr5 . exon 681409 681635 . + . ID=Thaps17841.1;Parent=Thaps17841;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 681805 682093 . + 0 ID=Thaps17841;Parent=Thaps17841;rank=2 chr5 . exon 681805 682093 . + . ID=Thaps17841.2;Parent=Thaps17841;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 686704 688655 . - . ID=Thaps262464;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2C8];external_name=Thaps262464;logic_name=jgi_thaps3 chr5 ensembl transcript 686704 688655 . - . ID=Thaps262464;Parent=Thaps262464;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 686704 687489 . - 0 ID=Thaps262464;Parent=Thaps262464;rank=3 chr5 . exon 686704 687489 . - . ID=Thaps262464.3;Parent=Thaps262464;constitutive=1;rank=3 chr5 . CDS 687571 688213 . - 0 ID=Thaps262464;Parent=Thaps262464;rank=2 chr5 . exon 687571 688213 . - . ID=Thaps262464.2;Parent=Thaps262464;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 688328 688655 . - 0 ID=Thaps262464;Parent=Thaps262464;rank=1 chr5 . exon 688328 688655 . - . ID=Thaps262464.1;Parent=Thaps262464;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 680010 680693 . + . ID=Thaps34218;biotype=protein_coding;description=ER lumen protein retaining receptor [Source:UniProtKB/TrEMBL%3BAcc:B8C2C4];external_name=Thaps34218;logic_name=jgi_thaps3 chr5 ensembl transcript 680010 680693 . + . ID=Thaps34218;Parent=Thaps34218;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 680010 680693 . + 0 ID=Thaps34218;Parent=Thaps34218;rank=1 chr5 . exon 680010 680693 . + . ID=Thaps34218.1;Parent=Thaps34218;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 682513 683963 . - . ID=Thaps5236;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2C6];external_name=Thaps5236;logic_name=jgi_thaps3 chr5 ensembl transcript 682513 683963 . - . ID=Thaps5236;Parent=Thaps5236;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 682513 683278 . - 0 ID=Thaps5236;Parent=Thaps5236;rank=4 chr5 . exon 682513 683278 . - . ID=Thaps5236.4;Parent=Thaps5236;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 683364 683604 . - 0 ID=Thaps5236;Parent=Thaps5236;rank=3 chr5 . exon 683364 683604 . - . ID=Thaps5236.3;Parent=Thaps5236;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 683676 683798 . - 0 ID=Thaps5236;Parent=Thaps5236;rank=2 chr5 . exon 683676 683798 . - . ID=Thaps5236.2;Parent=Thaps5236;constitutive=1;rank=2 chr5 . CDS 683885 683963 . - 0 ID=Thaps5236;Parent=Thaps5236;rank=1 chr5 . exon 683885 683963 . - . ID=Thaps5236.1;Parent=Thaps5236;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 684254 685125 . + . ID=Thaps5237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2C7];external_name=Thaps5237;logic_name=jgi_thaps3 chr5 ensembl transcript 684254 685125 . + . ID=Thaps5237;Parent=Thaps5237;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 684254 684535 . + 0 ID=Thaps5237;Parent=Thaps5237;rank=1 chr5 . exon 684254 684535 . + . ID=Thaps5237.1;Parent=Thaps5237;constitutive=1;rank=1 chr5 . CDS 684794 684885 . + 0 ID=Thaps5237;Parent=Thaps5237;rank=2 chr5 . exon 684794 684885 . + . ID=Thaps5237.2;Parent=Thaps5237;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 685023 685125 . + 0 ID=Thaps5237;Parent=Thaps5237;rank=3 chr5 . exon 685023 685125 . + . ID=Thaps5237.3;Parent=Thaps5237;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . repeat_region 688913 688966 . ? . description=dust chr5 . biological_region 689095 689095 0.999 + . logic_name=eponine chr5 . repeat_region 691253 691298 . ? . description=trf chr5 . repeat_region 691890 691930 . ? . description=dust chr5 . repeat_region 697978 698003 . ? . description=dust chr5 . repeat_region 697979 698003 . ? . description=trf chr5 ensembl protein_coding_gene 690158 691460 . + . ID=Thaps22650;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2C9];external_name=Thaps22650;logic_name=jgi_thaps3 chr5 ensembl transcript 690158 691460 . + . ID=Thaps22650;Parent=Thaps22650;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 690158 690262 . + 0 ID=Thaps22650;Parent=Thaps22650;rank=1 chr5 . exon 690158 690262 . + . ID=Thaps22650.1;Parent=Thaps22650;constitutive=1;rank=1 chr5 . CDS 690470 691198 . + 0 ID=Thaps22650;Parent=Thaps22650;rank=2 chr5 . exon 690470 691198 . + . ID=Thaps22650.2;Parent=Thaps22650;constitutive=1;rank=2 chr5 . CDS 691314 691460 . + 0 ID=Thaps22650;Parent=Thaps22650;rank=3 chr5 . exon 691314 691460 . + . ID=Thaps22650.3;Parent=Thaps22650;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 695213 697209 . + . ID=Thaps262467;biotype=protein_coding;description=Transporter belonging to the MFS superfamily [Source:UniProtKB/TrEMBL%3BAcc:B8C2D2];external_name=Thaps262467;logic_name=jgi_thaps3 chr5 ensembl transcript 695213 697209 . + . ID=Thaps262467;Parent=Thaps262467;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 695213 695412 . + 0 ID=Thaps262467;Parent=Thaps262467;rank=1 chr5 . exon 695213 695412 . + . ID=Thaps262467.1;Parent=Thaps262467;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 695502 696042 . + 0 ID=Thaps262467;Parent=Thaps262467;rank=2 chr5 . exon 695502 696042 . + . ID=Thaps262467.2;Parent=Thaps262467;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 696139 696325 . + 0 ID=Thaps262467;Parent=Thaps262467;rank=3 chr5 . exon 696139 696325 . + . ID=Thaps262467.3;Parent=Thaps262467;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 696623 697209 . + 0 ID=Thaps262467;Parent=Thaps262467;rank=4 chr5 . exon 696623 697209 . + . ID=Thaps262467.4;Parent=Thaps262467;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 698736 700103 . - . ID=Thaps460;biotype=protein_coding;description=Aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C2D3];external_name=Thaps460;logic_name=jgi_thaps3 chr5 ensembl transcript 698736 700103 . - . ID=Thaps460;Parent=Thaps460;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 698736 700103 . - 0 ID=Thaps460;Parent=Thaps460;rank=1 chr5 . exon 698736 700103 . - . ID=Thaps460.1;Parent=Thaps460;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 692150 693458 . + . ID=Thaps5240;biotype=protein_coding;description=Delta-aminolevulinic acid dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8C2D0];external_name=Thaps5240;logic_name=jgi_thaps3 chr5 ensembl transcript 692150 693458 . + . ID=Thaps5240;Parent=Thaps5240;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 692150 692275 . + 0 ID=Thaps5240;Parent=Thaps5240;rank=1 chr5 . exon 692150 692275 . + . ID=Thaps5240.1;Parent=Thaps5240;constitutive=1;rank=1 chr5 . CDS 692481 693458 . + 0 ID=Thaps5240;Parent=Thaps5240;rank=2 chr5 . exon 692481 693458 . + . ID=Thaps5240.2;Parent=Thaps5240;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 693631 694911 . - . ID=Thaps5241;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2D1];external_name=Thaps5241;logic_name=jgi_thaps3 chr5 ensembl transcript 693631 694911 . - . ID=Thaps5241;Parent=Thaps5241;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 693631 694911 . - 0 ID=Thaps5241;Parent=Thaps5241;rank=1 chr5 . exon 693631 694911 . - . ID=Thaps5241.1;Parent=Thaps5241;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 700808 704319 . + . ID=Thaps22651;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2D4];external_name=Thaps22651;logic_name=jgi_thaps3 chr5 ensembl transcript 700808 704319 . + . ID=Thaps22651;Parent=Thaps22651;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 700808 701372 . + 0 ID=Thaps22651;Parent=Thaps22651;rank=1 chr5 . exon 700808 701372 . + . ID=Thaps22651.1;Parent=Thaps22651;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 701440 701911 . + 0 ID=Thaps22651;Parent=Thaps22651;rank=2 chr5 . exon 701440 701911 . + . ID=Thaps22651.2;Parent=Thaps22651;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 702225 704319 . + 0 ID=Thaps22651;Parent=Thaps22651;rank=3 chr5 . exon 702225 704319 . + . ID=Thaps22651.3;Parent=Thaps22651;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 704581 706447 . + . ID=Thaps22652;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2D5];external_name=Thaps22652;logic_name=jgi_thaps3 chr5 ensembl transcript 704581 706447 . + . ID=Thaps22652;Parent=Thaps22652;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 704581 705539 . + 0 ID=Thaps22652;Parent=Thaps22652;rank=1 chr5 . exon 704581 705539 . + . ID=Thaps22652.1;Parent=Thaps22652;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 705787 706447 . + 0 ID=Thaps22652;Parent=Thaps22652;rank=2 chr5 . exon 705787 706447 . + . ID=Thaps22652.2;Parent=Thaps22652;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 708289 710541 . + . ID=Thaps5246;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2D6];external_name=Thaps5246;logic_name=jgi_thaps3 chr5 ensembl transcript 708289 710541 . + . ID=Thaps5246;Parent=Thaps5246;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 708289 710541 . + 0 ID=Thaps5246;Parent=Thaps5246;rank=1 chr5 . exon 708289 710541 . + . ID=Thaps5246.1;Parent=Thaps5246;constitutive=1;rank=1 chr5 . repeat_region 716674 716707 . ? . description=dust chr5 ensembl protein_coding_gene 710990 711771 . - . ID=Thaps16772;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2D7];external_name=Thaps16772;logic_name=jgi_thaps3 chr5 ensembl transcript 710990 711771 . - . ID=Thaps16772;Parent=Thaps16772;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 710990 711616 . - 0 ID=Thaps16772;Parent=Thaps16772;rank=2 chr5 . exon 710990 711616 . - . ID=Thaps16772.2;Parent=Thaps16772;constitutive=1;rank=2 chr5 . CDS 711700 711771 . - 0 ID=Thaps16772;Parent=Thaps16772;rank=1 chr5 . exon 711700 711771 . - . ID=Thaps16772.1;Parent=Thaps16772;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 713011 714521 . + . ID=Thaps268867;biotype=protein_coding;description=Serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8C2D8];external_name=Thaps268867;logic_name=jgi_thaps3 chr5 ensembl transcript 713011 714521 . + . ID=Thaps268867;Parent=Thaps268867;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 713011 713086 . + 0 ID=Thaps268867;Parent=Thaps268867;rank=1 chr5 . exon 713011 713086 . + . ID=Thaps268867.1;Parent=Thaps268867;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 713150 713241 . + 0 ID=Thaps268867;Parent=Thaps268867;rank=2 chr5 . exon 713150 713241 . + . ID=Thaps268867.2;Parent=Thaps268867;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 713281 713566 . + 0 ID=Thaps268867;Parent=Thaps268867;rank=3 chr5 . exon 713281 713566 . + . ID=Thaps268867.3;Parent=Thaps268867;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 713621 713755 . + 0 ID=Thaps268867;Parent=Thaps268867;rank=4 chr5 . exon 713621 713755 . + . ID=Thaps268867.4;Parent=Thaps268867;constitutive=1;rank=4 chr5 . CDS 713804 713838 . + 0 ID=Thaps268867;Parent=Thaps268867;rank=5 chr5 . exon 713804 713838 . + . ID=Thaps268867.5;Parent=Thaps268867;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 713880 714222 . + 0 ID=Thaps268867;Parent=Thaps268867;rank=6 chr5 . exon 713880 714222 . + . ID=Thaps268867.6;Parent=Thaps268867;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 714295 714521 . + 0 ID=Thaps268867;Parent=Thaps268867;rank=7 chr5 . exon 714295 714521 . + . ID=Thaps268867.7;Parent=Thaps268867;constitutive=1;ensembl_end_phase=2;rank=7 chr5 ensembl protein_coding_gene 716244 718891 . + . ID=Thaps268868;biotype=protein_coding;description=Nucleotide excision repair protein ERCC2 [Source:UniProtKB/TrEMBL%3BAcc:B8C2D9];external_name=ERCC2;logic_name=jgi_thaps3 chr5 ensembl transcript 716244 718891 . + . ID=Thaps268868;Parent=Thaps268868;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 716244 716534 . + 0 ID=Thaps268868;Parent=Thaps268868;rank=1 chr5 . exon 716244 716534 . + . ID=Thaps268868.1;Parent=Thaps268868;constitutive=1;rank=1 chr5 . CDS 716580 716586 . + 0 ID=Thaps268868;Parent=Thaps268868;rank=2 chr5 . exon 716580 716586 . + . ID=Thaps268868.2;Parent=Thaps268868;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 716800 718107 . + 0 ID=Thaps268868;Parent=Thaps268868;rank=3 chr5 . exon 716800 718107 . + . ID=Thaps268868.3;Parent=Thaps268868;constitutive=1;rank=3 chr5 . CDS 718185 718891 . + 0 ID=Thaps268868;Parent=Thaps268868;rank=4 chr5 . exon 718185 718891 . + . ID=Thaps268868.4;Parent=Thaps268868;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . repeat_region 727299 727382 . ? . description=trf chr5 . repeat_region 727420 727476 . ? . description=trf chr5 ensembl protein_coding_gene 723822 724097 . - . ID=Thaps19977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2E3];external_name=Thaps19977;logic_name=jgi_thaps3 chr5 ensembl transcript 723822 724097 . - . ID=Thaps19977;Parent=Thaps19977;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 723822 724097 . - 0 ID=Thaps19977;Parent=Thaps19977;rank=1 chr5 . exon 723822 724097 . - . ID=Thaps19977.1;Parent=Thaps19977;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 720075 721374 . - . ID=Thaps22655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2E1];external_name=Thaps22655;logic_name=jgi_thaps3 chr5 ensembl transcript 720075 721374 . - . ID=Thaps22655;Parent=Thaps22655;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 720075 720476 . - 0 ID=Thaps22655;Parent=Thaps22655;rank=2 chr5 . exon 720075 720476 . - . ID=Thaps22655.2;Parent=Thaps22655;constitutive=1;rank=2 chr5 . CDS 720661 721374 . - 0 ID=Thaps22655;Parent=Thaps22655;rank=1 chr5 . exon 720661 721374 . - . ID=Thaps22655.1;Parent=Thaps22655;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 721681 723639 . + . ID=Thaps22656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2E2];external_name=Thaps22656;logic_name=jgi_thaps3 chr5 ensembl transcript 721681 723639 . + . ID=Thaps22656;Parent=Thaps22656;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 721681 722371 . + 0 ID=Thaps22656;Parent=Thaps22656;rank=1 chr5 . exon 721681 722371 . + . ID=Thaps22656.1;Parent=Thaps22656;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 722399 722834 . + 0 ID=Thaps22656;Parent=Thaps22656;rank=2 chr5 . exon 722399 722834 . + . ID=Thaps22656.2;Parent=Thaps22656;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 723019 723322 . + 0 ID=Thaps22656;Parent=Thaps22656;rank=3 chr5 . exon 723019 723322 . + . ID=Thaps22656.3;Parent=Thaps22656;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 723430 723639 . + 0 ID=Thaps22656;Parent=Thaps22656;rank=4 chr5 . exon 723430 723639 . + . ID=Thaps22656.4;Parent=Thaps22656;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 726431 734549 . + . ID=Thaps22658;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2E4];external_name=Thaps22658;logic_name=jgi_thaps3 chr5 ensembl transcript 726431 734549 . + . ID=Thaps22658;Parent=Thaps22658;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 726431 726736 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=1 chr5 . exon 726431 726736 . + . ID=Thaps22658.1;Parent=Thaps22658;constitutive=1;rank=1 chr5 . CDS 726837 727052 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=2 chr5 . exon 726837 727052 . + . ID=Thaps22658.2;Parent=Thaps22658;constitutive=1;rank=2 chr5 . CDS 727149 727202 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=3 chr5 . exon 727149 727202 . + . ID=Thaps22658.3;Parent=Thaps22658;constitutive=1;rank=3 chr5 . CDS 727299 727382 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=4 chr5 . exon 727299 727382 . + . ID=Thaps22658.4;Parent=Thaps22658;constitutive=1;rank=4 chr5 . CDS 727498 727560 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=5 chr5 . exon 727498 727560 . + . ID=Thaps22658.5;Parent=Thaps22658;constitutive=1;rank=5 chr5 . CDS 727662 727778 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=6 chr5 . exon 727662 727778 . + . ID=Thaps22658.6;Parent=Thaps22658;constitutive=1;rank=6 chr5 . CDS 727864 727960 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=7 chr5 . exon 727864 727960 . + . ID=Thaps22658.7;Parent=Thaps22658;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 728018 728698 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=8 chr5 . exon 728018 728698 . + . ID=Thaps22658.8;Parent=Thaps22658;constitutive=1;rank=8 chr5 . CDS 728773 729192 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=9 chr5 . CDS 729285 729576 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=10 chr5 . CDS 729667 730376 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=11 chr5 . CDS 730470 730968 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=12 chr5 . CDS 731068 731727 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=13 chr5 . CDS 731809 733131 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=14 chr5 . CDS 733227 733292 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=15 chr5 . CDS 733369 734312 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=16 chr5 . CDS 734530 734549 . + 0 ID=Thaps22658;Parent=Thaps22658;rank=17 chr5 ensembl protein_coding_gene 719053 719460 . - . ID=Thaps5250;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2E0];external_name=Thaps5250;logic_name=jgi_thaps3 chr5 ensembl transcript 719053 719460 . - . ID=Thaps5250;Parent=Thaps5250;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 719053 719460 . - 0 ID=Thaps5250;Parent=Thaps5250;rank=1 chr5 . exon 719053 719460 . - . ID=Thaps5250.1;Parent=Thaps5250;constitutive=1;rank=1 chr5 . repeat_region 737977 737984 . ? . description=dust chr5 . exon 728773 729192 . + . ID=Thaps22658.9;Parent=Thaps22658;constitutive=1;rank=9 chr5 . exon 729285 729576 . + . ID=Thaps22658.10;Parent=Thaps22658;constitutive=1;ensembl_end_phase=1;rank=10 chr5 . exon 729667 730376 . + . ID=Thaps22658.11;Parent=Thaps22658;constitutive=1;ensembl_end_phase=2;rank=11 chr5 . exon 730470 730968 . + . ID=Thaps22658.12;Parent=Thaps22658;constitutive=1;ensembl_end_phase=1;rank=12 chr5 . exon 731068 731727 . + . ID=Thaps22658.13;Parent=Thaps22658;constitutive=1;rank=13 chr5 . exon 731809 733131 . + . ID=Thaps22658.14;Parent=Thaps22658;constitutive=1;rank=14 chr5 . exon 733227 733292 . + . ID=Thaps22658.15;Parent=Thaps22658;constitutive=1;rank=15 chr5 . exon 733369 734312 . + . ID=Thaps22658.16;Parent=Thaps22658;constitutive=1;ensembl_end_phase=2;rank=16 chr5 . exon 734530 734549 . + . ID=Thaps22658.17;Parent=Thaps22658;constitutive=1;ensembl_end_phase=2;rank=17 chr5 ensembl protein_coding_gene 734983 737710 . - . ID=Thaps22659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2E5];external_name=Thaps22659;logic_name=jgi_thaps3 chr5 ensembl transcript 734983 737710 . - . ID=Thaps22659;Parent=Thaps22659;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 734983 737300 . - 0 ID=Thaps22659;Parent=Thaps22659;rank=2 chr5 . exon 734983 737300 . - . ID=Thaps22659.2;Parent=Thaps22659;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 737407 737710 . - 0 ID=Thaps22659;Parent=Thaps22659;rank=1 chr5 . exon 737407 737710 . - . ID=Thaps22659.1;Parent=Thaps22659;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 738199 740456 . + . ID=Thaps5256;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2E6];external_name=Thaps5256;logic_name=jgi_thaps3 chr5 ensembl transcript 738199 740456 . + . ID=Thaps5256;Parent=Thaps5256;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 738199 738741 . + 0 ID=Thaps5256;Parent=Thaps5256;rank=1 chr5 . exon 738199 738741 . + . ID=Thaps5256.1;Parent=Thaps5256;constitutive=1;rank=1 chr5 . CDS 738927 740456 . + 0 ID=Thaps5256;Parent=Thaps5256;rank=2 chr5 ensembl protein_coding_gene 745724 748077 . - . ID=Thaps22661;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2E9];external_name=Thaps22661;logic_name=jgi_thaps3 chr5 ensembl transcript 745724 748077 . - . ID=Thaps22661;Parent=Thaps22661;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 745724 746236 . - 0 ID=Thaps22661;Parent=Thaps22661;rank=4 chr5 . exon 745724 746236 . - . ID=Thaps22661.4;Parent=Thaps22661;constitutive=1;rank=4 chr5 . CDS 746309 746467 . - 0 ID=Thaps22661;Parent=Thaps22661;rank=3 chr5 . exon 746309 746467 . - . ID=Thaps22661.3;Parent=Thaps22661;constitutive=1;rank=3 chr5 . CDS 746538 747605 . - 0 ID=Thaps22661;Parent=Thaps22661;rank=2 chr5 . exon 746538 747605 . - . ID=Thaps22661.2;Parent=Thaps22661;constitutive=1;rank=2 chr5 . CDS 747868 748077 . - 0 ID=Thaps22661;Parent=Thaps22661;rank=1 chr5 . exon 747868 748077 . - . ID=Thaps22661.1;Parent=Thaps22661;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 741651 743861 . + . ID=Thaps34344;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2E7];external_name=Thaps34344;logic_name=jgi_thaps3 chr5 ensembl transcript 741651 743861 . + . ID=Thaps34344;Parent=Thaps34344;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 741651 741897 . + 0 ID=Thaps34344;Parent=Thaps34344;rank=1 chr5 . exon 741651 741897 . + . ID=Thaps34344.1;Parent=Thaps34344;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 743149 743270 . + 0 ID=Thaps34344;Parent=Thaps34344;rank=2 chr5 . exon 743149 743270 . + . ID=Thaps34344.2;Parent=Thaps34344;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 743355 743861 . + 0 ID=Thaps34344;Parent=Thaps34344;rank=3 chr5 . exon 743355 743861 . + . ID=Thaps34344.3;Parent=Thaps34344;constitutive=1;rank=3 chr5 . exon 738927 740456 . + . ID=Thaps5256.2;Parent=Thaps5256;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 745275 745589 . + . ID=Thaps5259;biotype=protein_coding;description=RL44%2C ribosomal protein 44 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C2E8];external_name=RL44;logic_name=jgi_thaps3 chr5 ensembl transcript 745275 745589 . + . ID=Thaps5259;Parent=Thaps5259;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 745275 745589 . + 0 ID=Thaps5259;Parent=Thaps5259;rank=1 chr5 . exon 745275 745589 . + . ID=Thaps5259.1;Parent=Thaps5259;constitutive=1;rank=1 chr5 . repeat_region 752307 752314 . ? . description=dust chr5 . repeat_region 756465 756508 . ? . description=dust chr5 . repeat_region 756476 756508 . ? . description=trf chr5 ensembl protein_coding_gene 754213 757208 . - . ID=Thaps22663;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F3];external_name=Thaps22663;logic_name=jgi_thaps3 chr5 ensembl transcript 754213 757208 . - . ID=Thaps22663;Parent=Thaps22663;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 754213 755222 . - 0 ID=Thaps22663;Parent=Thaps22663;rank=3 chr5 . exon 754213 755222 . - . ID=Thaps22663.3;Parent=Thaps22663;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 755277 755379 . - 0 ID=Thaps22663;Parent=Thaps22663;rank=2 chr5 . exon 755277 755379 . - . ID=Thaps22663.2;Parent=Thaps22663;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 755424 757208 . - 0 ID=Thaps22663;Parent=Thaps22663;rank=1 chr5 . exon 755424 757208 . - . ID=Thaps22663.1;Parent=Thaps22663;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 748904 750603 . + . ID=Thaps262474;biotype=protein_coding;description=Rad51/RecA-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F0];external_name=Thaps262474;logic_name=jgi_thaps3 chr5 ensembl transcript 748904 750603 . + . ID=Thaps262474;Parent=Thaps262474;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 748904 749035 . + 0 ID=Thaps262474;Parent=Thaps262474;rank=1 chr5 . exon 748904 749035 . + . ID=Thaps262474.1;Parent=Thaps262474;constitutive=1;rank=1 chr5 . CDS 749118 749136 . + 0 ID=Thaps262474;Parent=Thaps262474;rank=2 chr5 . exon 749118 749136 . + . ID=Thaps262474.2;Parent=Thaps262474;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 749235 749393 . + 0 ID=Thaps262474;Parent=Thaps262474;rank=3 chr5 . exon 749235 749393 . + . ID=Thaps262474.3;Parent=Thaps262474;constitutive=1;rank=3 chr5 . CDS 749514 749659 . + 0 ID=Thaps262474;Parent=Thaps262474;rank=4 chr5 . exon 749514 749659 . + . ID=Thaps262474.4;Parent=Thaps262474;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 749716 749723 . + 0 ID=Thaps262474;Parent=Thaps262474;rank=5 chr5 . exon 749716 749723 . + . ID=Thaps262474.5;Parent=Thaps262474;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 749749 749981 . + 0 ID=Thaps262474;Parent=Thaps262474;rank=6 chr5 . exon 749749 749981 . + . ID=Thaps262474.6;Parent=Thaps262474;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 750012 750603 . + 0 ID=Thaps262474;Parent=Thaps262474;rank=7 chr5 . exon 750012 750603 . + . ID=Thaps262474.7;Parent=Thaps262474;constitutive=1;ensembl_end_phase=1;rank=7 chr5 ensembl protein_coding_gene 750973 752298 . - . ID=Thaps5262;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F1];external_name=Thaps5262;logic_name=jgi_thaps3 chr5 ensembl transcript 750973 752298 . - . ID=Thaps5262;Parent=Thaps5262;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 750973 752298 . - 0 ID=Thaps5262;Parent=Thaps5262;rank=1 chr5 . exon 750973 752298 . - . ID=Thaps5262.1;Parent=Thaps5262;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 752680 754080 . + . ID=Thaps5263;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F2];external_name=Thaps5263;logic_name=jgi_thaps3 chr5 ensembl transcript 752680 754080 . + . ID=Thaps5263;Parent=Thaps5263;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 752680 754080 . + 0 ID=Thaps5263;Parent=Thaps5263;rank=1 chr5 . exon 752680 754080 . + . ID=Thaps5263.1;Parent=Thaps5263;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 757525 759321 . - . ID=Thaps5265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F4];external_name=Thaps5265;logic_name=jgi_thaps3 chr5 ensembl transcript 757525 759321 . - . ID=Thaps5265;Parent=Thaps5265;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 757525 759321 . - 0 ID=Thaps5265;Parent=Thaps5265;rank=1 chr5 . exon 757525 759321 . - . ID=Thaps5265.1;Parent=Thaps5265;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 766213 767619 . - . ID=Thaps22666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F8];external_name=Thaps22666;logic_name=jgi_thaps3 chr5 ensembl transcript 766213 767619 . - . ID=Thaps22666;Parent=Thaps22666;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 766213 767619 . - 0 ID=Thaps22666;Parent=Thaps22666;rank=1 chr5 . exon 766213 767619 . - . ID=Thaps22666.1;Parent=Thaps22666;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 763234 764425 . + . ID=Thaps268872;biotype=protein_coding;description=Set-domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F6];external_name=Thaps268872;logic_name=jgi_thaps3 chr5 ensembl transcript 763234 764425 . + . ID=Thaps268872;Parent=Thaps268872;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 763234 763624 . + 0 ID=Thaps268872;Parent=Thaps268872;rank=1 chr5 . exon 763234 763624 . + . ID=Thaps268872.1;Parent=Thaps268872;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 763703 764154 . + 0 ID=Thaps268872;Parent=Thaps268872;rank=2 chr5 . exon 763703 764154 . + . ID=Thaps268872.2;Parent=Thaps268872;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 764219 764330 . + 0 ID=Thaps268872;Parent=Thaps268872;rank=3 chr5 . exon 764219 764330 . + . ID=Thaps268872.3;Parent=Thaps268872;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 764415 764425 . + 0 ID=Thaps268872;Parent=Thaps268872;rank=4 chr5 . exon 764415 764425 . + . ID=Thaps268872.4;Parent=Thaps268872;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 764782 766062 . - . ID=Thaps40704;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F7];external_name=Thaps40704;logic_name=jgi_thaps3 chr5 ensembl transcript 764782 766062 . - . ID=Thaps40704;Parent=Thaps40704;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 764782 765306 . - 0 ID=Thaps40704;Parent=Thaps40704;rank=4 chr5 . exon 764782 765306 . - . ID=Thaps40704.4;Parent=Thaps40704;constitutive=1;rank=4 chr5 . CDS 765388 765620 . - 0 ID=Thaps40704;Parent=Thaps40704;rank=3 chr5 . exon 765388 765620 . - . ID=Thaps40704.3;Parent=Thaps40704;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 765739 765897 . - 0 ID=Thaps40704;Parent=Thaps40704;rank=2 chr5 . exon 765739 765897 . - . ID=Thaps40704.2;Parent=Thaps40704;constitutive=1;rank=2 chr5 . CDS 765987 766062 . - 0 ID=Thaps40704;Parent=Thaps40704;rank=1 chr5 . exon 765987 766062 . - . ID=Thaps40704.1;Parent=Thaps40704;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 760307 761288 . - . ID=Thaps5266;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F5];external_name=Thaps5266;logic_name=jgi_thaps3 chr5 ensembl transcript 760307 761288 . - . ID=Thaps5266;Parent=Thaps5266;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 760307 760332 . - 0 ID=Thaps5266;Parent=Thaps5266;rank=3 chr5 . exon 760307 760332 . - . ID=Thaps5266.3;Parent=Thaps5266;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 760374 761040 . - 0 ID=Thaps5266;Parent=Thaps5266;rank=2 chr5 . exon 760374 761040 . - . ID=Thaps5266.2;Parent=Thaps5266;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 761151 761288 . - 0 ID=Thaps5266;Parent=Thaps5266;rank=1 chr5 . exon 761151 761288 . - . ID=Thaps5266.1;Parent=Thaps5266;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 768044 769150 . + . ID=Thaps5270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2F9];external_name=Thaps5270;logic_name=jgi_thaps3 chr5 ensembl transcript 768044 769150 . + . ID=Thaps5270;Parent=Thaps5270;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 768044 769150 . + 0 ID=Thaps5270;Parent=Thaps5270;rank=1 chr5 . exon 768044 769150 . + . ID=Thaps5270.1;Parent=Thaps5270;constitutive=1;rank=1 chr5 . repeat_region 770145 770152 . ? . description=dust chr5 . biological_region 771280 771281 0.999 - . logic_name=eponine chr5 . repeat_region 772127 772167 . ? . description=dust chr5 ensembl protein_coding_gene 769233 770904 . - . ID=Thaps22667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2G0];external_name=Thaps22667;logic_name=jgi_thaps3 chr5 ensembl transcript 769233 770904 . - . ID=Thaps22667;Parent=Thaps22667;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 769233 769252 . - 0 ID=Thaps22667;Parent=Thaps22667;rank=3 chr5 . exon 769233 769252 . - . ID=Thaps22667.3;Parent=Thaps22667;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 769344 770367 . - 0 ID=Thaps22667;Parent=Thaps22667;rank=2 chr5 . exon 769344 770367 . - . ID=Thaps22667.2;Parent=Thaps22667;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 770521 770904 . - 0 ID=Thaps22667;Parent=Thaps22667;rank=1 chr5 . exon 770521 770904 . - . ID=Thaps22667.1;Parent=Thaps22667;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 778607 782496 . + . ID=Thaps22668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2G3];external_name=Thaps22668;logic_name=jgi_thaps3 chr5 ensembl transcript 778607 782496 . + . ID=Thaps22668;Parent=Thaps22668;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 778607 780527 . + 0 ID=Thaps22668;Parent=Thaps22668;rank=1 chr5 . exon 778607 780527 . + . ID=Thaps22668.1;Parent=Thaps22668;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 780563 782496 . + 0 ID=Thaps22668;Parent=Thaps22668;rank=2 chr5 ensembl protein_coding_gene 771592 771975 . - . ID=Thaps5272;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2G1];external_name=Thaps5272;logic_name=jgi_thaps3 chr5 ensembl transcript 771592 771975 . - . ID=Thaps5272;Parent=Thaps5272;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 771592 771975 . - 0 ID=Thaps5272;Parent=Thaps5272;rank=1 chr5 . exon 771592 771975 . - . ID=Thaps5272.1;Parent=Thaps5272;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 772277 777430 . + . ID=Thaps5273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2G2];external_name=Thaps5273;logic_name=jgi_thaps3 chr5 ensembl transcript 772277 777430 . + . ID=Thaps5273;Parent=Thaps5273;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 772277 772883 . + 0 ID=Thaps5273;Parent=Thaps5273;rank=1 chr5 . exon 772277 772883 . + . ID=Thaps5273.1;Parent=Thaps5273;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 772974 773863 . + 0 ID=Thaps5273;Parent=Thaps5273;rank=2 chr5 . exon 772974 773863 . + . ID=Thaps5273.2;Parent=Thaps5273;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 773943 775541 . + 0 ID=Thaps5273;Parent=Thaps5273;rank=3 chr5 . exon 773943 775541 . + . ID=Thaps5273.3;Parent=Thaps5273;constitutive=1;rank=3 chr5 . CDS 775612 775718 . + 0 ID=Thaps5273;Parent=Thaps5273;rank=4 chr5 . exon 775612 775718 . + . ID=Thaps5273.4;Parent=Thaps5273;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 775797 776153 . + 0 ID=Thaps5273;Parent=Thaps5273;rank=5 chr5 . exon 775797 776153 . + . ID=Thaps5273.5;Parent=Thaps5273;constitutive=1;rank=5 chr5 . CDS 776238 776340 . + 0 ID=Thaps5273;Parent=Thaps5273;rank=6 chr5 . exon 776238 776340 . + . ID=Thaps5273.6;Parent=Thaps5273;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 776447 777430 . + 0 ID=Thaps5273;Parent=Thaps5273;rank=7 chr5 . exon 776447 777430 . + . ID=Thaps5273.7;Parent=Thaps5273;constitutive=1;rank=7 chr5 . exon 780563 782496 . + . ID=Thaps22668.2;Parent=Thaps22668;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 785842 786900 . - . ID=Thaps22669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2G6];external_name=Thaps22669;logic_name=jgi_thaps3 chr5 ensembl transcript 785842 786900 . - . ID=Thaps22669;Parent=Thaps22669;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 785842 786900 . - 0 ID=Thaps22669;Parent=Thaps22669;rank=1 chr5 . exon 785842 786900 . - . ID=Thaps22669.1;Parent=Thaps22669;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 782809 783362 . - . ID=Thaps262478;biotype=protein_coding;description=Anaphase promoting complex subunit 10 [Source:UniProtKB/TrEMBL%3BAcc:B8C2G4];external_name=APC10;logic_name=jgi_thaps3 chr5 ensembl transcript 782809 783362 . - . ID=Thaps262478;Parent=Thaps262478;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 782809 782946 . - 0 ID=Thaps262478;Parent=Thaps262478;rank=2 chr5 . exon 782809 782946 . - . ID=Thaps262478.2;Parent=Thaps262478;constitutive=1;rank=2 chr5 . CDS 783043 783362 . - 0 ID=Thaps262478;Parent=Thaps262478;rank=1 chr5 . exon 783043 783362 . - . ID=Thaps262478.1;Parent=Thaps262478;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 787394 788175 . + . ID=Thaps34418;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2G7];external_name=Thaps34418;logic_name=jgi_thaps3 chr5 ensembl transcript 787394 788175 . + . ID=Thaps34418;Parent=Thaps34418;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 787394 787628 . + 0 ID=Thaps34418;Parent=Thaps34418;rank=1 chr5 . exon 787394 787628 . + . ID=Thaps34418.1;Parent=Thaps34418;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 787706 788175 . + 0 ID=Thaps34418;Parent=Thaps34418;rank=2 chr5 . exon 787706 788175 . + . ID=Thaps34418.2;Parent=Thaps34418;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 783852 785720 . + . ID=Thaps5276;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2G5];external_name=Thaps5276;logic_name=jgi_thaps3 chr5 ensembl transcript 783852 785720 . + . ID=Thaps5276;Parent=Thaps5276;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 783852 784234 . + 0 ID=Thaps5276;Parent=Thaps5276;rank=1 chr5 . exon 783852 784234 . + . ID=Thaps5276.1;Parent=Thaps5276;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 784353 785011 . + 0 ID=Thaps5276;Parent=Thaps5276;rank=2 chr5 . exon 784353 785011 . + . ID=Thaps5276.2;Parent=Thaps5276;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 785083 785465 . + 0 ID=Thaps5276;Parent=Thaps5276;rank=3 chr5 . exon 785083 785465 . + . ID=Thaps5276.3;Parent=Thaps5276;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 785546 785618 . + 0 ID=Thaps5276;Parent=Thaps5276;rank=4 chr5 . exon 785546 785618 . + . ID=Thaps5276.4;Parent=Thaps5276;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 785698 785720 . + 0 ID=Thaps5276;Parent=Thaps5276;rank=5 chr5 . exon 785698 785720 . + . ID=Thaps5276.5;Parent=Thaps5276;constitutive=1;ensembl_end_phase=2;rank=5 chr5 ensembl protein_coding_gene 788898 789906 . - . ID=Thaps22670;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2G8];external_name=Thaps22670;logic_name=jgi_thaps3 chr5 ensembl transcript 788898 789906 . - . ID=Thaps22670;Parent=Thaps22670;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 788898 789050 . - 0 ID=Thaps22670;Parent=Thaps22670;rank=3 chr5 . exon 788898 789050 . - . ID=Thaps22670.3;Parent=Thaps22670;constitutive=1;rank=3 chr5 . CDS 789133 789213 . - 0 ID=Thaps22670;Parent=Thaps22670;rank=2 chr5 . exon 789133 789213 . - . ID=Thaps22670.2;Parent=Thaps22670;constitutive=1;rank=2 chr5 . CDS 789295 789906 . - 0 ID=Thaps22670;Parent=Thaps22670;rank=1 chr5 . exon 789295 789906 . - . ID=Thaps22670.1;Parent=Thaps22670;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 790150 792090 . + . ID=Thaps22671;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2G9];external_name=Thaps22671;logic_name=jgi_thaps3 chr5 ensembl transcript 790150 792090 . + . ID=Thaps22671;Parent=Thaps22671;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 790150 792090 . + 0 ID=Thaps22671;Parent=Thaps22671;rank=1 chr5 . exon 790150 792090 . + . ID=Thaps22671.1;Parent=Thaps22671;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 794464 796269 . + . ID=Thaps22672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H1];external_name=Thaps22672;logic_name=jgi_thaps3 chr5 ensembl transcript 794464 796269 . + . ID=Thaps22672;Parent=Thaps22672;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 794464 796269 . + 0 ID=Thaps22672;Parent=Thaps22672;rank=1 chr5 . exon 794464 796269 . + . ID=Thaps22672.1;Parent=Thaps22672;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 792170 794185 . - . ID=Thaps262480;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H0];external_name=Thaps262480;logic_name=jgi_thaps3 chr5 ensembl transcript 792170 794185 . - . ID=Thaps262480;Parent=Thaps262480;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 792170 792891 . - 0 ID=Thaps262480;Parent=Thaps262480;rank=4 chr5 . exon 792170 792891 . - . ID=Thaps262480.4;Parent=Thaps262480;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 793045 793135 . - 0 ID=Thaps262480;Parent=Thaps262480;rank=3 chr5 . exon 793045 793135 . - . ID=Thaps262480.3;Parent=Thaps262480;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 793226 793410 . - 0 ID=Thaps262480;Parent=Thaps262480;rank=2 chr5 . exon 793226 793410 . - . ID=Thaps262480.2;Parent=Thaps262480;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 793615 794185 . - 0 ID=Thaps262480;Parent=Thaps262480;rank=1 chr5 . exon 793615 794185 . - . ID=Thaps262480.1;Parent=Thaps262480;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 796322 798716 . - . ID=Thaps5283;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H2];external_name=Thaps5283;logic_name=jgi_thaps3 chr5 ensembl transcript 796322 798716 . - . ID=Thaps5283;Parent=Thaps5283;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 796322 796354 . - 0 ID=Thaps5283;Parent=Thaps5283;rank=3 chr5 . exon 796322 796354 . - . ID=Thaps5283.3;Parent=Thaps5283;constitutive=1;rank=3 chr5 . CDS 796404 797419 . - 0 ID=Thaps5283;Parent=Thaps5283;rank=2 chr5 . exon 796404 797419 . - . ID=Thaps5283.2;Parent=Thaps5283;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 797528 798716 . - 0 ID=Thaps5283;Parent=Thaps5283;rank=1 chr5 . exon 797528 798716 . - . ID=Thaps5283.1;Parent=Thaps5283;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 805203 805211 . ? . description=dust chr5 ensembl protein_coding_gene 799305 800106 . + . ID=Thaps5284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H3];external_name=Thaps5284;logic_name=jgi_thaps3 chr5 ensembl transcript 799305 800106 . + . ID=Thaps5284;Parent=Thaps5284;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 799305 799409 . + 0 ID=Thaps5284;Parent=Thaps5284;rank=1 chr5 . exon 799305 799409 . + . ID=Thaps5284.1;Parent=Thaps5284;constitutive=1;rank=1 chr5 . CDS 799600 800106 . + 0 ID=Thaps5284;Parent=Thaps5284;rank=2 chr5 . exon 799600 800106 . + . ID=Thaps5284.2;Parent=Thaps5284;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 800773 802369 . - . ID=Thaps5285;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H4];external_name=Thaps5285;logic_name=jgi_thaps3 chr5 ensembl transcript 800773 802369 . - . ID=Thaps5285;Parent=Thaps5285;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 800773 801287 . - 0 ID=Thaps5285;Parent=Thaps5285;rank=3 chr5 . exon 800773 801287 . - . ID=Thaps5285.3;Parent=Thaps5285;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 801372 801767 . - 0 ID=Thaps5285;Parent=Thaps5285;rank=2 chr5 . exon 801372 801767 . - . ID=Thaps5285.2;Parent=Thaps5285;constitutive=1;rank=2 chr5 . CDS 801940 802369 . - 0 ID=Thaps5285;Parent=Thaps5285;rank=1 chr5 . exon 801940 802369 . - . ID=Thaps5285.1;Parent=Thaps5285;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 803264 805133 . - . ID=Thaps5286;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H5];external_name=Thaps5286;logic_name=jgi_thaps3 chr5 ensembl transcript 803264 805133 . - . ID=Thaps5286;Parent=Thaps5286;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 803264 803398 . - 0 ID=Thaps5286;Parent=Thaps5286;rank=2 chr5 . exon 803264 803398 . - . ID=Thaps5286.2;Parent=Thaps5286;constitutive=1;rank=2 chr5 . CDS 803511 805133 . - 0 ID=Thaps5286;Parent=Thaps5286;rank=1 chr5 . exon 803511 805133 . - . ID=Thaps5286.1;Parent=Thaps5286;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 805328 806881 . + . ID=Thaps5287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H6];external_name=Thaps5287;logic_name=jgi_thaps3 chr5 ensembl transcript 805328 806881 . + . ID=Thaps5287;Parent=Thaps5287;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 805328 806881 . + 0 ID=Thaps5287;Parent=Thaps5287;rank=1 chr5 . exon 805328 806881 . + . ID=Thaps5287.1;Parent=Thaps5287;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 807066 808220 . - . ID=Thaps5288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H7];external_name=Thaps5288;logic_name=jgi_thaps3 chr5 ensembl transcript 807066 808220 . - . ID=Thaps5288;Parent=Thaps5288;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 807066 807433 . - 0 ID=Thaps5288;Parent=Thaps5288;rank=4 chr5 . exon 807066 807433 . - . ID=Thaps5288.4;Parent=Thaps5288;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 807553 807626 . - 0 ID=Thaps5288;Parent=Thaps5288;rank=3 chr5 . exon 807553 807626 . - . ID=Thaps5288.3;Parent=Thaps5288;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 807653 807750 . - 0 ID=Thaps5288;Parent=Thaps5288;rank=2 chr5 . exon 807653 807750 . - . ID=Thaps5288.2;Parent=Thaps5288;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 807936 808220 . - 0 ID=Thaps5288;Parent=Thaps5288;rank=1 chr5 . exon 807936 808220 . - . ID=Thaps5288.1;Parent=Thaps5288;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 808441 809211 . + . ID=Thaps5289;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H8];external_name=Thaps5289;logic_name=jgi_thaps3 chr5 ensembl transcript 808441 809211 . + . ID=Thaps5289;Parent=Thaps5289;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 808441 809211 . + 0 ID=Thaps5289;Parent=Thaps5289;rank=1 chr5 . exon 808441 809211 . + . ID=Thaps5289.1;Parent=Thaps5289;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 809620 810063 . - . ID=Thaps22673;biotype=protein_coding;description=Sep-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2H9];external_name=Thaps22673;logic_name=jgi_thaps3 chr5 ensembl transcript 809620 810063 . - . ID=Thaps22673;Parent=Thaps22673;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 809620 810063 . - 0 ID=Thaps22673;Parent=Thaps22673;rank=1 chr5 . exon 809620 810063 . - . ID=Thaps22673.1;Parent=Thaps22673;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 812132 817713 . - . ID=Thaps5291;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2I0];external_name=Thaps5291;logic_name=jgi_thaps3 chr5 ensembl transcript 812132 817713 . - . ID=Thaps5291;Parent=Thaps5291;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 812132 812418 . - 0 ID=Thaps5291;Parent=Thaps5291;rank=8 chr5 . exon 812132 812418 . - . ID=Thaps5291.8;Parent=Thaps5291;constitutive=1;ensembl_end_phase=2;rank=8 chr5 . CDS 812507 812582 . - 0 ID=Thaps5291;Parent=Thaps5291;rank=7 chr5 . exon 812507 812582 . - . ID=Thaps5291.7;Parent=Thaps5291;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 812659 812789 . - 0 ID=Thaps5291;Parent=Thaps5291;rank=6 chr5 . exon 812659 812789 . - . ID=Thaps5291.6;Parent=Thaps5291;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 812869 812944 . - 0 ID=Thaps5291;Parent=Thaps5291;rank=5 chr5 . exon 812869 812944 . - . ID=Thaps5291.5;Parent=Thaps5291;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 813011 813049 . - 0 ID=Thaps5291;Parent=Thaps5291;rank=4 chr5 . exon 813011 813049 . - . ID=Thaps5291.4;Parent=Thaps5291;constitutive=1;rank=4 chr5 . CDS 813146 813992 . - 0 ID=Thaps5291;Parent=Thaps5291;rank=3 chr5 . exon 813146 813992 . - . ID=Thaps5291.3;Parent=Thaps5291;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 814069 814191 . - 0 ID=Thaps5291;Parent=Thaps5291;rank=2 chr5 . exon 814069 814191 . - . ID=Thaps5291.2;Parent=Thaps5291;constitutive=1;rank=2 chr5 . CDS 814265 817713 . - 0 ID=Thaps5291;Parent=Thaps5291;rank=1 chr5 . exon 814265 817713 . - . ID=Thaps5291.1;Parent=Thaps5291;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . repeat_region 820134 820142 . ? . description=dust chr5 ensembl protein_coding_gene 820461 831480 . - . ID=Thaps5293;biotype=protein_coding;description=3-isopropylmalate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C2I2];external_name=Thaps5293;logic_name=jgi_thaps3 chr5 ensembl transcript 820461 831480 . - . ID=Thaps5293;Parent=Thaps5293;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 820461 821032 . - 0 ID=Thaps5293;Parent=Thaps5293;rank=5 chr5 . exon 820461 821032 . - . ID=Thaps5293.5;Parent=Thaps5293;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 821414 821482 . - 0 ID=Thaps5293;Parent=Thaps5293;rank=4 chr5 . exon 821414 821482 . - . ID=Thaps5293.4;Parent=Thaps5293;constitutive=1;rank=4 chr5 . CDS 821620 822087 . - 0 ID=Thaps5293;Parent=Thaps5293;rank=3 chr5 . exon 821620 822087 . - . ID=Thaps5293.3;Parent=Thaps5293;constitutive=1;rank=3 chr5 . CDS 831369 831369 . - 0 ID=Thaps5293;Parent=Thaps5293;rank=2 chr5 . CDS 831460 831480 . - 0 ID=Thaps5293;Parent=Thaps5293;rank=1 chr5 ensembl protein_coding_gene 818674 820092 . - . ID=Thaps55;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2I1];external_name=Thaps55;logic_name=jgi_thaps3 chr5 ensembl transcript 818674 820092 . - . ID=Thaps55;Parent=Thaps55;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 818674 820092 . - 0 ID=Thaps55;Parent=Thaps55;rank=1 chr5 . exon 818674 820092 . - . ID=Thaps55.1;Parent=Thaps55;constitutive=1;rank=1 chr5 . repeat_region 831707 831744 . ? . description=trf chr5 . exon 831369 831369 . - . ID=Thaps5293.2;Parent=Thaps5293;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 831460 831480 . - . ID=Thaps5293.1;Parent=Thaps5293;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 831629 833388 . - . ID=Thaps5294;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2I4];external_name=Thaps5294;logic_name=jgi_thaps3 chr5 ensembl transcript 831629 833388 . - . ID=Thaps5294;Parent=Thaps5294;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 831629 832122 . - 0 ID=Thaps5294;Parent=Thaps5294;rank=2 chr5 . exon 831629 832122 . - . ID=Thaps5294.2;Parent=Thaps5294;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 832237 833388 . - 0 ID=Thaps5294;Parent=Thaps5294;rank=1 chr5 . exon 832237 833388 . - . ID=Thaps5294.1;Parent=Thaps5294;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 833774 836635 . + . ID=Thaps5295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2I5];external_name=Thaps5295;logic_name=jgi_thaps3 chr5 ensembl transcript 833774 836635 . + . ID=Thaps5295;Parent=Thaps5295;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 833774 836635 . + 0 ID=Thaps5295;Parent=Thaps5295;rank=1 chr5 . exon 833774 836635 . + . ID=Thaps5295.1;Parent=Thaps5295;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 837919 839632 . - . ID=Thaps5296;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2I6];external_name=Thaps5296;logic_name=jgi_thaps3 chr5 ensembl transcript 837919 839632 . - . ID=Thaps5296;Parent=Thaps5296;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 837919 838148 . - 0 ID=Thaps5296;Parent=Thaps5296;rank=4 chr5 . exon 837919 838148 . - . ID=Thaps5296.4;Parent=Thaps5296;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 838250 838365 . - 0 ID=Thaps5296;Parent=Thaps5296;rank=3 chr5 . exon 838250 838365 . - . ID=Thaps5296.3;Parent=Thaps5296;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 838779 839212 . - 0 ID=Thaps5296;Parent=Thaps5296;rank=2 chr5 . CDS 839261 839632 . - 0 ID=Thaps5296;Parent=Thaps5296;rank=1 chr5 . exon 838779 839212 . - . ID=Thaps5296.2;Parent=Thaps5296;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 839261 839632 . - . ID=Thaps5296.1;Parent=Thaps5296;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 841470 843299 . - . ID=Thaps5297;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2I7];external_name=Thaps5297;logic_name=jgi_thaps3 chr5 ensembl transcript 841470 843299 . - . ID=Thaps5297;Parent=Thaps5297;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 841470 843299 . - 0 ID=Thaps5297;Parent=Thaps5297;rank=1 chr5 . exon 841470 843299 . - . ID=Thaps5297.1;Parent=Thaps5297;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 844161 849077 . + . ID=Thaps5298;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2I8];external_name=Thaps5298;logic_name=jgi_thaps3 chr5 ensembl transcript 844161 849077 . + . ID=Thaps5298;Parent=Thaps5298;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 844161 847862 . + 0 ID=Thaps5298;Parent=Thaps5298;rank=1 chr5 . exon 844161 847862 . + . ID=Thaps5298.1;Parent=Thaps5298;constitutive=1;rank=1 chr5 . CDS 847950 849077 . + 0 ID=Thaps5298;Parent=Thaps5298;rank=2 chr5 . exon 847950 849077 . + . ID=Thaps5298.2;Parent=Thaps5298;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 849173 853520 . - . ID=Thaps22676;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2I9];external_name=Thaps22676;logic_name=jgi_thaps3 chr5 ensembl transcript 849173 853520 . - . ID=Thaps22676;Parent=Thaps22676;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 849173 851517 . - 0 ID=Thaps22676;Parent=Thaps22676;rank=2 chr5 . exon 849173 851517 . - . ID=Thaps22676.2;Parent=Thaps22676;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 851795 853520 . - 0 ID=Thaps22676;Parent=Thaps22676;rank=1 chr5 . exon 851795 853520 . - . ID=Thaps22676.1;Parent=Thaps22676;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 853742 855211 . + . ID=Thaps22677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2J0];external_name=Thaps22677;logic_name=jgi_thaps3 chr5 ensembl transcript 853742 855211 . + . ID=Thaps22677;Parent=Thaps22677;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 853742 855211 . + 0 ID=Thaps22677;Parent=Thaps22677;rank=1 chr5 . exon 853742 855211 . + . ID=Thaps22677.1;Parent=Thaps22677;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 857607 858962 . - . ID=Thaps22679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2J3];external_name=Thaps22679;logic_name=jgi_thaps3 chr5 ensembl transcript 857607 858962 . - . ID=Thaps22679;Parent=Thaps22679;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 857607 858962 . - 0 ID=Thaps22679;Parent=Thaps22679;rank=1 chr5 . exon 857607 858962 . - . ID=Thaps22679.1;Parent=Thaps22679;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 856653 857213 . - . ID=Thaps34413;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2J2];external_name=Thaps34413;logic_name=jgi_thaps3 chr5 ensembl transcript 856653 857213 . - . ID=Thaps34413;Parent=Thaps34413;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 856653 857213 . - 0 ID=Thaps34413;Parent=Thaps34413;rank=1 chr5 . exon 856653 857213 . - . ID=Thaps34413.1;Parent=Thaps34413;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 855330 855980 . - . ID=Thaps5301;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2J1];external_name=Thaps5301;logic_name=jgi_thaps3 chr5 ensembl transcript 855330 855980 . - . ID=Thaps5301;Parent=Thaps5301;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 855330 855436 . - 0 ID=Thaps5301;Parent=Thaps5301;rank=2 chr5 . exon 855330 855436 . - . ID=Thaps5301.2;Parent=Thaps5301;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 855515 855980 . - 0 ID=Thaps5301;Parent=Thaps5301;rank=1 chr5 . exon 855515 855980 . - . ID=Thaps5301.1;Parent=Thaps5301;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 860931 860988 . ? . description=trf chr5 ensembl protein_coding_gene 865978 867709 . + . ID=Thaps262487;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2J6];external_name=Thaps262487;logic_name=jgi_thaps3 chr5 ensembl transcript 865978 867709 . + . ID=Thaps262487;Parent=Thaps262487;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 865978 866277 . + 0 ID=Thaps262487;Parent=Thaps262487;rank=1 chr5 . exon 865978 866277 . + . ID=Thaps262487.1;Parent=Thaps262487;constitutive=1;rank=1 chr5 . CDS 866368 866659 . + 0 ID=Thaps262487;Parent=Thaps262487;rank=2 chr5 . exon 866368 866659 . + . ID=Thaps262487.2;Parent=Thaps262487;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 866714 866816 . + 0 ID=Thaps262487;Parent=Thaps262487;rank=3 chr5 . exon 866714 866816 . + . ID=Thaps262487.3;Parent=Thaps262487;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 866864 866918 . + 0 ID=Thaps262487;Parent=Thaps262487;rank=4 chr5 . exon 866864 866918 . + . ID=Thaps262487.4;Parent=Thaps262487;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 866996 867047 . + 0 ID=Thaps262487;Parent=Thaps262487;rank=5 chr5 . exon 866996 867047 . + . ID=Thaps262487.5;Parent=Thaps262487;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 867114 867709 . + 0 ID=Thaps262487;Parent=Thaps262487;rank=6 chr5 . exon 867114 867709 . + . ID=Thaps262487.6;Parent=Thaps262487;constitutive=1;ensembl_end_phase=2;rank=6 chr5 ensembl protein_coding_gene 861165 862175 . - . ID=Thaps40713;biotype=protein_coding;description=Superoxide dismutase [Source:UniProtKB/TrEMBL%3BAcc:B8C2J5];external_name=Thaps40713;logic_name=jgi_thaps3 chr5 ensembl transcript 861165 862175 . - . ID=Thaps40713;Parent=Thaps40713;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 861165 861367 . - 0 ID=Thaps40713;Parent=Thaps40713;rank=3 chr5 . exon 861165 861367 . - . ID=Thaps40713.3;Parent=Thaps40713;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 861470 861826 . - 0 ID=Thaps40713;Parent=Thaps40713;rank=2 chr5 . exon 861470 861826 . - . ID=Thaps40713.2;Parent=Thaps40713;constitutive=1;rank=2 chr5 . CDS 862010 862175 . - 0 ID=Thaps40713;Parent=Thaps40713;rank=1 chr5 . exon 862010 862175 . - . ID=Thaps40713.1;Parent=Thaps40713;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 859977 860923 . + . ID=Thaps5304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2J4];external_name=Thaps5304;logic_name=jgi_thaps3 chr5 ensembl transcript 859977 860923 . + . ID=Thaps5304;Parent=Thaps5304;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 859977 860396 . + 0 ID=Thaps5304;Parent=Thaps5304;rank=1 chr5 . exon 859977 860396 . + . ID=Thaps5304.1;Parent=Thaps5304;constitutive=1;rank=1 chr5 . CDS 860570 860923 . + 0 ID=Thaps5304;Parent=Thaps5304;rank=2 chr5 . exon 860570 860923 . + . ID=Thaps5304.2;Parent=Thaps5304;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 868870 869931 . + . ID=Thaps22681;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2J7];external_name=Thaps22681;logic_name=jgi_thaps3 chr5 ensembl transcript 868870 869931 . + . ID=Thaps22681;Parent=Thaps22681;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 868870 869389 . + 0 ID=Thaps22681;Parent=Thaps22681;rank=1 chr5 . exon 868870 869389 . + . ID=Thaps22681.1;Parent=Thaps22681;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 869660 869931 . + 0 ID=Thaps22681;Parent=Thaps22681;rank=2 chr5 . exon 869660 869931 . + . ID=Thaps22681.2;Parent=Thaps22681;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 878003 879387 . + . ID=Thaps22682;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K0];external_name=Thaps22682;logic_name=jgi_thaps3 chr5 ensembl transcript 878003 879387 . + . ID=Thaps22682;Parent=Thaps22682;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 878003 878054 . + 0 ID=Thaps22682;Parent=Thaps22682;rank=1 chr5 . exon 878003 878054 . + . ID=Thaps22682.1;Parent=Thaps22682;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 878235 878524 . + 0 ID=Thaps22682;Parent=Thaps22682;rank=2 chr5 . exon 878235 878524 . + . ID=Thaps22682.2;Parent=Thaps22682;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 878703 878756 . + 0 ID=Thaps22682;Parent=Thaps22682;rank=3 chr5 . CDS 878816 878940 . + 0 ID=Thaps22682;Parent=Thaps22682;rank=4 chr5 . CDS 878997 879387 . + 0 ID=Thaps22682;Parent=Thaps22682;rank=5 chr5 ensembl protein_coding_gene 870453 873332 . - . ID=Thaps5308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2J8];external_name=Thaps5308;logic_name=jgi_thaps3 chr5 ensembl transcript 870453 873332 . - . ID=Thaps5308;Parent=Thaps5308;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 870453 870974 . - 0 ID=Thaps5308;Parent=Thaps5308;rank=4 chr5 . exon 870453 870974 . - . ID=Thaps5308.4;Parent=Thaps5308;constitutive=1;rank=4 chr5 . CDS 871052 871078 . - 0 ID=Thaps5308;Parent=Thaps5308;rank=3 chr5 . exon 871052 871078 . - . ID=Thaps5308.3;Parent=Thaps5308;constitutive=1;rank=3 chr5 . CDS 871245 872999 . - 0 ID=Thaps5308;Parent=Thaps5308;rank=2 chr5 . exon 871245 872999 . - . ID=Thaps5308.2;Parent=Thaps5308;constitutive=1;rank=2 chr5 . CDS 873108 873332 . - 0 ID=Thaps5308;Parent=Thaps5308;rank=1 chr5 . exon 873108 873332 . - . ID=Thaps5308.1;Parent=Thaps5308;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 875415 877766 . - . ID=Thaps5309;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2J9];external_name=Thaps5309;logic_name=jgi_thaps3 chr5 ensembl transcript 875415 877766 . - . ID=Thaps5309;Parent=Thaps5309;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 875415 877766 . - 0 ID=Thaps5309;Parent=Thaps5309;rank=1 chr5 . exon 875415 877766 . - . ID=Thaps5309.1;Parent=Thaps5309;constitutive=1;rank=1 chr5 . repeat_region 879629 879883 . - . description=scaffold_1_246_1_675950_677742 chr5 . repeat_region 884893 884900 . ? . description=dust chr5 . exon 878703 878756 . + . ID=Thaps22682.3;Parent=Thaps22682;constitutive=1;rank=3 chr5 . exon 878816 878940 . + . ID=Thaps22682.4;Parent=Thaps22682;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . exon 878997 879387 . + . ID=Thaps22682.5;Parent=Thaps22682;constitutive=1;ensembl_end_phase=1;rank=5 chr5 ensembl protein_coding_gene 882221 886690 . - . ID=Thaps22683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K2];external_name=Thaps22683;logic_name=jgi_thaps3 chr5 ensembl transcript 882221 886690 . - . ID=Thaps22683;Parent=Thaps22683;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 882221 883425 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=11 chr5 . exon 882221 883425 . - . ID=Thaps22683.11;Parent=Thaps22683;constitutive=1;ensembl_end_phase=2;rank=11 chr5 . CDS 883541 883677 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=10 chr5 . exon 883541 883677 . - . ID=Thaps22683.10;Parent=Thaps22683;constitutive=1;ensembl_end_phase=2;rank=10 chr5 . CDS 883765 883784 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=9 chr5 . exon 883765 883784 . - . ID=Thaps22683.9;Parent=Thaps22683;constitutive=1;ensembl_end_phase=2;rank=9 chr5 . CDS 883902 883937 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=8 chr5 . exon 883902 883937 . - . ID=Thaps22683.8;Parent=Thaps22683;constitutive=1;rank=8 chr5 . CDS 884189 884251 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=7 chr5 . exon 884189 884251 . - . ID=Thaps22683.7;Parent=Thaps22683;constitutive=1;rank=7 chr5 . CDS 884349 884396 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=6 chr5 . exon 884349 884396 . - . ID=Thaps22683.6;Parent=Thaps22683;constitutive=1;rank=6 chr5 . CDS 884573 884653 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=5 chr5 . exon 884573 884653 . - . ID=Thaps22683.5;Parent=Thaps22683;constitutive=1;rank=5 chr5 . CDS 884755 884781 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=4 chr5 . exon 884755 884781 . - . ID=Thaps22683.4;Parent=Thaps22683;constitutive=1;rank=4 chr5 . CDS 884883 885323 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=3 chr5 . exon 884883 885323 . - . ID=Thaps22683.3;Parent=Thaps22683;constitutive=1;rank=3 chr5 . CDS 885619 885886 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=2 chr5 . exon 885619 885886 . - . ID=Thaps22683.2;Parent=Thaps22683;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 885966 886690 . - 0 ID=Thaps22683;Parent=Thaps22683;rank=1 chr5 . exon 885966 886690 . - . ID=Thaps22683.1;Parent=Thaps22683;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 881210 882022 . + . ID=Thaps34058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K1];external_name=Thaps34058;logic_name=jgi_thaps3 chr5 ensembl transcript 881210 882022 . + . ID=Thaps34058;Parent=Thaps34058;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 881210 881447 . + 0 ID=Thaps34058;Parent=Thaps34058;rank=1 chr5 . exon 881210 881447 . + . ID=Thaps34058.1;Parent=Thaps34058;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 881532 882022 . + 0 ID=Thaps34058;Parent=Thaps34058;rank=2 chr5 . exon 881532 882022 . + . ID=Thaps34058.2;Parent=Thaps34058;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 887693 888705 . + . ID=Thaps5313;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K3];external_name=Thaps5313;logic_name=jgi_thaps3 chr5 ensembl transcript 887693 888705 . + . ID=Thaps5313;Parent=Thaps5313;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 887693 888308 . + 0 ID=Thaps5313;Parent=Thaps5313;rank=1 chr5 . exon 887693 888308 . + . ID=Thaps5313.1;Parent=Thaps5313;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 888440 888585 . + 0 ID=Thaps5313;Parent=Thaps5313;rank=2 chr5 . exon 888440 888585 . + . ID=Thaps5313.2;Parent=Thaps5313;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 888640 888705 . + 0 ID=Thaps5313;Parent=Thaps5313;rank=3 chr5 ensembl protein_coding_gene 891443 891946 . - . ID=Thaps34276;biotype=protein_coding;description=Fucoxanthin chl a/c light-harvesting protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K6];external_name=LHCR3;logic_name=jgi_thaps3 chr5 ensembl transcript 891443 891946 . - . ID=Thaps34276;Parent=Thaps34276;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 891443 891946 . - 0 ID=Thaps34276;Parent=Thaps34276;rank=1 chr5 . exon 891443 891946 . - . ID=Thaps34276.1;Parent=Thaps34276;constitutive=1;rank=1 chr5 . exon 888640 888705 . + . ID=Thaps5313.3;Parent=Thaps5313;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 889199 890128 . + . ID=Thaps5314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K4];external_name=Thaps5314;logic_name=jgi_thaps3 chr5 ensembl transcript 889199 890128 . + . ID=Thaps5314;Parent=Thaps5314;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 889199 890128 . + 0 ID=Thaps5314;Parent=Thaps5314;rank=1 chr5 . exon 889199 890128 . + . ID=Thaps5314.1;Parent=Thaps5314;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 890451 891019 . - . ID=Thaps5315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K5];external_name=Thaps5315;logic_name=jgi_thaps3 chr5 ensembl transcript 890451 891019 . - . ID=Thaps5315;Parent=Thaps5315;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 890451 890753 . - 0 ID=Thaps5315;Parent=Thaps5315;rank=2 chr5 . exon 890451 890753 . - . ID=Thaps5315.2;Parent=Thaps5315;constitutive=1;rank=2 chr5 . CDS 890840 891019 . - 0 ID=Thaps5315;Parent=Thaps5315;rank=1 chr5 . exon 890840 891019 . - . ID=Thaps5315.1;Parent=Thaps5315;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 892650 893654 . + . ID=Thaps5317;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K7];external_name=Thaps5317;logic_name=jgi_thaps3 chr5 ensembl transcript 892650 893654 . + . ID=Thaps5317;Parent=Thaps5317;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 892650 892679 . + 0 ID=Thaps5317;Parent=Thaps5317;rank=1 chr5 . exon 892650 892679 . + . ID=Thaps5317.1;Parent=Thaps5317;constitutive=1;rank=1 chr5 . CDS 892886 893248 . + 0 ID=Thaps5317;Parent=Thaps5317;rank=2 chr5 . exon 892886 893248 . + . ID=Thaps5317.2;Parent=Thaps5317;constitutive=1;rank=2 chr5 . CDS 893343 893654 . + 0 ID=Thaps5317;Parent=Thaps5317;rank=3 chr5 . exon 893343 893654 . + . ID=Thaps5317.3;Parent=Thaps5317;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 894258 895316 . - . ID=Thaps5318;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K8];external_name=Thaps5318;logic_name=jgi_thaps3 chr5 ensembl transcript 894258 895316 . - . ID=Thaps5318;Parent=Thaps5318;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 894258 895316 . - 0 ID=Thaps5318;Parent=Thaps5318;rank=1 chr5 . exon 894258 895316 . - . ID=Thaps5318.1;Parent=Thaps5318;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 895826 898417 . - . ID=Thaps5319;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2K9];external_name=Thaps5319;logic_name=jgi_thaps3 chr5 ensembl transcript 895826 898417 . - . ID=Thaps5319;Parent=Thaps5319;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 895826 898417 . - 0 ID=Thaps5319;Parent=Thaps5319;rank=1 chr5 . exon 895826 898417 . - . ID=Thaps5319.1;Parent=Thaps5319;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 899513 901943 . - . ID=Thaps34191;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L0];external_name=Thaps34191;logic_name=jgi_thaps3 chr5 ensembl transcript 899513 901943 . - . ID=Thaps34191;Parent=Thaps34191;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 899513 899877 . - 0 ID=Thaps34191;Parent=Thaps34191;rank=3 chr5 . exon 899513 899877 . - . ID=Thaps34191.3;Parent=Thaps34191;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 899993 901654 . - 0 ID=Thaps34191;Parent=Thaps34191;rank=2 chr5 . exon 899993 901654 . - . ID=Thaps34191.2;Parent=Thaps34191;constitutive=1;rank=2 chr5 . CDS 901733 901943 . - 0 ID=Thaps34191;Parent=Thaps34191;rank=1 chr5 . exon 901733 901943 . - . ID=Thaps34191.1;Parent=Thaps34191;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 902067 904137 . - . ID=Thaps5321;biotype=protein_coding;external_name=Thaps5321;logic_name=jgi_thaps3 chr5 ensembl transcript 902067 904137 . - . ID=Thaps5321;Parent=Thaps5321;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 902067 902692 . - 0 ID=Thaps5321;Parent=Thaps5321;rank=3 chr5 . exon 902067 902692 . - . ID=Thaps5321.3;Parent=Thaps5321;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 902779 903111 . - 0 ID=Thaps5321;Parent=Thaps5321;rank=2 chr5 . exon 902779 903111 . - . ID=Thaps5321.2;Parent=Thaps5321;constitutive=1;rank=2 chr5 . CDS 903258 904137 . - 0 ID=Thaps5321;Parent=Thaps5321;rank=1 chr5 . exon 903258 904137 . - . ID=Thaps5321.1;Parent=Thaps5321;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 904268 907443 . + . ID=Thaps5322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L1];external_name=Thaps5322;logic_name=jgi_thaps3 chr5 ensembl transcript 904268 907443 . + . ID=Thaps5322;Parent=Thaps5322;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 904268 905113 . + 0 ID=Thaps5322;Parent=Thaps5322;rank=1 chr5 . exon 904268 905113 . + . ID=Thaps5322.1;Parent=Thaps5322;constitutive=1;rank=1 chr5 . CDS 905205 905440 . + 0 ID=Thaps5322;Parent=Thaps5322;rank=2 chr5 . exon 905205 905440 . + . ID=Thaps5322.2;Parent=Thaps5322;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 905541 906453 . + 0 ID=Thaps5322;Parent=Thaps5322;rank=3 chr5 . exon 905541 906453 . + . ID=Thaps5322.3;Parent=Thaps5322;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 906530 907228 . + 0 ID=Thaps5322;Parent=Thaps5322;rank=4 chr5 . exon 906530 907228 . + . ID=Thaps5322.4;Parent=Thaps5322;constitutive=1;rank=4 chr5 . CDS 907420 907443 . + 0 ID=Thaps5322;Parent=Thaps5322;rank=5 chr5 . exon 907420 907443 . + . ID=Thaps5322.5;Parent=Thaps5322;constitutive=1;rank=5 chr5 ensembl protein_coding_gene 907746 909289 . - . ID=Thaps5323;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L2];external_name=Thaps5323;logic_name=jgi_thaps3 chr5 ensembl transcript 907746 909289 . - . ID=Thaps5323;Parent=Thaps5323;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 907746 907957 . - 0 ID=Thaps5323;Parent=Thaps5323;rank=5 chr5 . exon 907746 907957 . - . ID=Thaps5323.5;Parent=Thaps5323;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 908040 908122 . - 0 ID=Thaps5323;Parent=Thaps5323;rank=4 chr5 . exon 908040 908122 . - . ID=Thaps5323.4;Parent=Thaps5323;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 908209 908949 . - 0 ID=Thaps5323;Parent=Thaps5323;rank=3 chr5 . exon 908209 908949 . - . ID=Thaps5323.3;Parent=Thaps5323;constitutive=1;rank=3 chr5 . CDS 909005 909189 . - 0 ID=Thaps5323;Parent=Thaps5323;rank=2 chr5 . CDS 909254 909289 . - 0 ID=Thaps5323;Parent=Thaps5323;rank=1 chr5 ensembl protein_coding_gene 909489 910794 . + . ID=Thaps22685;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L3];external_name=Thaps22685;logic_name=jgi_thaps3 chr5 ensembl transcript 909489 910794 . + . ID=Thaps22685;Parent=Thaps22685;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 909489 909978 . + 0 ID=Thaps22685;Parent=Thaps22685;rank=1 chr5 . exon 909489 909978 . + . ID=Thaps22685.1;Parent=Thaps22685;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 910045 910081 . + 0 ID=Thaps22685;Parent=Thaps22685;rank=2 chr5 . exon 910045 910081 . + . ID=Thaps22685.2;Parent=Thaps22685;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 910166 910683 . + 0 ID=Thaps22685;Parent=Thaps22685;rank=3 chr5 . exon 910166 910683 . + . ID=Thaps22685.3;Parent=Thaps22685;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 910709 910794 . + 0 ID=Thaps22685;Parent=Thaps22685;rank=4 chr5 . exon 910709 910794 . + . ID=Thaps22685.4;Parent=Thaps22685;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 916087 916983 . - . ID=Thaps22686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L5];external_name=Thaps22686;logic_name=jgi_thaps3 chr5 ensembl transcript 916087 916983 . - . ID=Thaps22686;Parent=Thaps22686;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 916087 916983 . - 0 ID=Thaps22686;Parent=Thaps22686;rank=1 chr5 . exon 916087 916983 . - . ID=Thaps22686.1;Parent=Thaps22686;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 918116 919492 . + . ID=Thaps268880;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L6];external_name=Thaps268880;logic_name=jgi_thaps3 chr5 ensembl transcript 918116 919492 . + . ID=Thaps268880;Parent=Thaps268880;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 918116 919492 . + 0 ID=Thaps268880;Parent=Thaps268880;rank=1 chr5 . exon 918116 919492 . + . ID=Thaps268880.1;Parent=Thaps268880;constitutive=1;rank=1 chr5 . exon 909005 909189 . - . ID=Thaps5323.2;Parent=Thaps5323;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 909254 909289 . - . ID=Thaps5323.1;Parent=Thaps5323;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 910925 915434 . - . ID=Thaps5325;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L4];external_name=Thaps5325;logic_name=jgi_thaps3 chr5 ensembl transcript 910925 915434 . - . ID=Thaps5325;Parent=Thaps5325;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 910925 910946 . - 0 ID=Thaps5325;Parent=Thaps5325;rank=7 chr5 . exon 910925 910946 . - . ID=Thaps5325.7;Parent=Thaps5325;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 910976 911118 . - 0 ID=Thaps5325;Parent=Thaps5325;rank=6 chr5 . exon 910976 911118 . - . ID=Thaps5325.6;Parent=Thaps5325;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 911208 912554 . - 0 ID=Thaps5325;Parent=Thaps5325;rank=5 chr5 . exon 911208 912554 . - . ID=Thaps5325.5;Parent=Thaps5325;constitutive=1;rank=5 chr5 . CDS 913229 913281 . - 0 ID=Thaps5325;Parent=Thaps5325;rank=4 chr5 . exon 913229 913281 . - . ID=Thaps5325.4;Parent=Thaps5325;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 913352 913509 . - 0 ID=Thaps5325;Parent=Thaps5325;rank=3 chr5 . exon 913352 913509 . - . ID=Thaps5325.3;Parent=Thaps5325;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 913588 914146 . - 0 ID=Thaps5325;Parent=Thaps5325;rank=2 chr5 . exon 913588 914146 . - . ID=Thaps5325.2;Parent=Thaps5325;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 914231 915434 . - 0 ID=Thaps5325;Parent=Thaps5325;rank=1 chr5 . exon 914231 915434 . - . ID=Thaps5325.1;Parent=Thaps5325;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 920535 920667 . + . description=TE2c_TP chr5 . repeat_region 921448 922298 . ? . description=trf chr5 . repeat_region 922671 922680 . ? . description=dust chr5 . repeat_region 923924 924228 . ? . description=trf chr5 . biological_region 927396 927396 0.999 - . logic_name=eponine chr5 ensembl protein_coding_gene 924495 927622 . - . ID=Thaps22688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L8];external_name=Thaps22688;logic_name=jgi_thaps3 chr5 ensembl transcript 924495 927622 . - . ID=Thaps22688;Parent=Thaps22688;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 924495 925252 . - 0 ID=Thaps22688;Parent=Thaps22688;rank=3 chr5 . exon 924495 925252 . - . ID=Thaps22688.3;Parent=Thaps22688;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 925330 925464 . - 0 ID=Thaps22688;Parent=Thaps22688;rank=2 chr5 . exon 925330 925464 . - . ID=Thaps22688.2;Parent=Thaps22688;constitutive=1;rank=2 chr5 . CDS 925534 927622 . - 0 ID=Thaps22688;Parent=Thaps22688;rank=1 chr5 . exon 925534 927622 . - . ID=Thaps22688.1;Parent=Thaps22688;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 921037 922350 . + . ID=Thaps5328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L7];external_name=Thaps5328;logic_name=jgi_thaps3 chr5 ensembl transcript 921037 922350 . + . ID=Thaps5328;Parent=Thaps5328;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 921037 921095 . + 0 ID=Thaps5328;Parent=Thaps5328;rank=1 chr5 . exon 921037 921095 . + . ID=Thaps5328.1;Parent=Thaps5328;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 921425 921495 . + 0 ID=Thaps5328;Parent=Thaps5328;rank=2 chr5 . exon 921425 921495 . + . ID=Thaps5328.2;Parent=Thaps5328;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 921566 921619 . + 0 ID=Thaps5328;Parent=Thaps5328;rank=3 chr5 . exon 921566 921619 . + . ID=Thaps5328.3;Parent=Thaps5328;constitutive=1;rank=3 chr5 . CDS 921689 921742 . + 0 ID=Thaps5328;Parent=Thaps5328;rank=4 chr5 . exon 921689 921742 . + . ID=Thaps5328.4;Parent=Thaps5328;constitutive=1;rank=4 chr5 . CDS 921813 921866 . + 0 ID=Thaps5328;Parent=Thaps5328;rank=5 chr5 . exon 921813 921866 . + . ID=Thaps5328.5;Parent=Thaps5328;constitutive=1;rank=5 chr5 . CDS 921937 921990 . + 0 ID=Thaps5328;Parent=Thaps5328;rank=6 chr5 . exon 921937 921990 . + . ID=Thaps5328.6;Parent=Thaps5328;constitutive=1;rank=6 chr5 . CDS 922123 922176 . + 0 ID=Thaps5328;Parent=Thaps5328;rank=7 chr5 . exon 922123 922176 . + . ID=Thaps5328.7;Parent=Thaps5328;constitutive=1;rank=7 chr5 . CDS 922247 922350 . + 0 ID=Thaps5328;Parent=Thaps5328;rank=8 chr5 . exon 922247 922350 . + . ID=Thaps5328.8;Parent=Thaps5328;constitutive=1;ensembl_end_phase=2;rank=8 chr5 ensembl protein_coding_gene 927804 929474 . + . ID=Thaps5330;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2L9];external_name=Thaps5330;logic_name=jgi_thaps3 chr5 ensembl transcript 927804 929474 . + . ID=Thaps5330;Parent=Thaps5330;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 927804 929474 . + 0 ID=Thaps5330;Parent=Thaps5330;rank=1 chr5 . exon 927804 929474 . + . ID=Thaps5330.1;Parent=Thaps5330;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 929586 930338 . - . ID=Thaps22689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M0];external_name=Thaps22689;logic_name=jgi_thaps3 chr5 ensembl transcript 929586 930338 . - . ID=Thaps22689;Parent=Thaps22689;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 929586 930166 . - 0 ID=Thaps22689;Parent=Thaps22689;rank=2 chr5 . exon 929586 930166 . - . ID=Thaps22689.2;Parent=Thaps22689;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 930263 930338 . - 0 ID=Thaps22689;Parent=Thaps22689;rank=1 chr5 . exon 930263 930338 . - . ID=Thaps22689.1;Parent=Thaps22689;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 930499 931819 . + . ID=Thaps268881;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M1];external_name=Thaps268881;logic_name=jgi_thaps3 chr5 ensembl transcript 930499 931819 . + . ID=Thaps268881;Parent=Thaps268881;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 930499 930652 . + 0 ID=Thaps268881;Parent=Thaps268881;rank=1 chr5 . exon 930499 930652 . + . ID=Thaps268881.1;Parent=Thaps268881;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 930737 930987 . + 0 ID=Thaps268881;Parent=Thaps268881;rank=2 chr5 . exon 930737 930987 . + . ID=Thaps268881.2;Parent=Thaps268881;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 931079 931819 . + 0 ID=Thaps268881;Parent=Thaps268881;rank=3 chr5 . exon 931079 931819 . + . ID=Thaps268881.3;Parent=Thaps268881;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 934804 935625 . + . ID=Thaps34203;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M3];external_name=Thaps34203;logic_name=jgi_thaps3 chr5 ensembl transcript 934804 935625 . + . ID=Thaps34203;Parent=Thaps34203;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 934804 935050 . + 0 ID=Thaps34203;Parent=Thaps34203;rank=1 chr5 . exon 934804 935050 . + . ID=Thaps34203.1;Parent=Thaps34203;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 935150 935625 . + 0 ID=Thaps34203;Parent=Thaps34203;rank=2 chr5 . exon 935150 935625 . + . ID=Thaps34203.2;Parent=Thaps34203;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 931885 933735 . - . ID=Thaps5332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M2];external_name=Thaps5332;logic_name=jgi_thaps3 chr5 ensembl transcript 931885 933735 . - . ID=Thaps5332;Parent=Thaps5332;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 931885 933735 . - 0 ID=Thaps5332;Parent=Thaps5332;rank=1 chr5 . exon 931885 933735 . - . ID=Thaps5332.1;Parent=Thaps5332;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 937046 937777 . - . ID=Thaps5334;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M4];external_name=Thaps5334;logic_name=jgi_thaps3 chr5 ensembl transcript 937046 937777 . - . ID=Thaps5334;Parent=Thaps5334;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 937046 937777 . - 0 ID=Thaps5334;Parent=Thaps5334;rank=1 chr5 . exon 937046 937777 . - . ID=Thaps5334.1;Parent=Thaps5334;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 938263 939287 . - . ID=Thaps5335;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M5];external_name=Thaps5335;logic_name=jgi_thaps3 chr5 ensembl transcript 938263 939287 . - . ID=Thaps5335;Parent=Thaps5335;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 938263 938889 . - 0 ID=Thaps5335;Parent=Thaps5335;rank=2 chr5 . exon 938263 938889 . - . ID=Thaps5335.2;Parent=Thaps5335;constitutive=1;rank=2 chr5 . CDS 938994 939287 . - 0 ID=Thaps5335;Parent=Thaps5335;rank=1 chr5 . repeat_region 944645 944721 . ? . description=trf chr5 ensembl protein_coding_gene 944498 946021 . - . ID=Thaps22690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M8];external_name=Thaps22690;logic_name=jgi_thaps3 chr5 ensembl transcript 944498 946021 . - . ID=Thaps22690;Parent=Thaps22690;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 944498 945117 . - 0 ID=Thaps22690;Parent=Thaps22690;rank=2 chr5 . exon 944498 945117 . - . ID=Thaps22690.2;Parent=Thaps22690;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 945205 946021 . - 0 ID=Thaps22690;Parent=Thaps22690;rank=1 chr5 . exon 945205 946021 . - . ID=Thaps22690.1;Parent=Thaps22690;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . exon 938994 939287 . - . ID=Thaps5335.1;Parent=Thaps5335;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 939655 940500 . + . ID=Thaps5336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M6];external_name=Thaps5336;logic_name=jgi_thaps3 chr5 ensembl transcript 939655 940500 . + . ID=Thaps5336;Parent=Thaps5336;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 939655 940500 . + 0 ID=Thaps5336;Parent=Thaps5336;rank=1 chr5 . exon 939655 940500 . + . ID=Thaps5336.1;Parent=Thaps5336;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 940768 944237 . + . ID=Thaps5337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M7];external_name=Thaps5337;logic_name=jgi_thaps3 chr5 ensembl transcript 940768 944237 . + . ID=Thaps5337;Parent=Thaps5337;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 940768 944186 . + 0 ID=Thaps5337;Parent=Thaps5337;rank=1 chr5 . exon 940768 944186 . + . ID=Thaps5337.1;Parent=Thaps5337;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 944213 944237 . + 0 ID=Thaps5337;Parent=Thaps5337;rank=2 chr5 . exon 944213 944237 . + . ID=Thaps5337.2;Parent=Thaps5337;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 947499 948854 . - . ID=Thaps5339;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2M9];external_name=Thaps5339;logic_name=jgi_thaps3 chr5 ensembl transcript 947499 948854 . - . ID=Thaps5339;Parent=Thaps5339;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 947499 948436 . - 0 ID=Thaps5339;Parent=Thaps5339;rank=2 chr5 . exon 947499 948436 . - . ID=Thaps5339.2;Parent=Thaps5339;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 948521 948854 . - 0 ID=Thaps5339;Parent=Thaps5339;rank=1 chr5 . repeat_region 952761 952812 . ? . description=dust chr5 ensembl protein_coding_gene 955613 956821 . - . ID=Thaps22692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2N3];external_name=Thaps22692;logic_name=jgi_thaps3 chr5 ensembl transcript 955613 956821 . - . ID=Thaps22692;Parent=Thaps22692;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 955613 956821 . - 0 ID=Thaps22692;Parent=Thaps22692;rank=1 chr5 . exon 955613 956821 . - . ID=Thaps22692.1;Parent=Thaps22692;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 958188 959441 . - . ID=Thaps22694;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2N5];external_name=Thaps22694;logic_name=jgi_thaps3 chr5 ensembl transcript 958188 959441 . - . ID=Thaps22694;Parent=Thaps22694;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 958188 959441 . - 0 ID=Thaps22694;Parent=Thaps22694;rank=1 chr5 . exon 958188 959441 . - . ID=Thaps22694.1;Parent=Thaps22694;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 951127 952848 . + . ID=Thaps34221;biotype=protein_coding;description=RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C2N1];external_name=Thaps34221;logic_name=jgi_thaps3 chr5 ensembl transcript 951127 952848 . + . ID=Thaps34221;Parent=Thaps34221;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 951127 951840 . + 0 ID=Thaps34221;Parent=Thaps34221;rank=1 chr5 . exon 951127 951840 . + . ID=Thaps34221.1;Parent=Thaps34221;constitutive=1;rank=1 chr5 . CDS 951991 952076 . + 0 ID=Thaps34221;Parent=Thaps34221;rank=2 chr5 . exon 951991 952076 . + . ID=Thaps34221.2;Parent=Thaps34221;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 952233 952848 . + 0 ID=Thaps34221;Parent=Thaps34221;rank=3 chr5 . exon 952233 952848 . + . ID=Thaps34221.3;Parent=Thaps34221;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 957730 958074 . + . ID=Thaps34357;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2N4];external_name=Thaps34357;logic_name=jgi_thaps3 chr5 ensembl transcript 957730 958074 . + . ID=Thaps34357;Parent=Thaps34357;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 957730 958074 . + 0 ID=Thaps34357;Parent=Thaps34357;rank=1 chr5 . exon 957730 958074 . + . ID=Thaps34357.1;Parent=Thaps34357;constitutive=1;rank=1 chr5 . exon 948521 948854 . - . ID=Thaps5339.1;Parent=Thaps5339;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 949117 949909 . + . ID=Thaps5340;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2N0];external_name=Thaps5340;logic_name=jgi_thaps3 chr5 ensembl transcript 949117 949909 . + . ID=Thaps5340;Parent=Thaps5340;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 949117 949389 . + 0 ID=Thaps5340;Parent=Thaps5340;rank=1 chr5 . exon 949117 949389 . + . ID=Thaps5340.1;Parent=Thaps5340;constitutive=1;rank=1 chr5 . CDS 949457 949909 . + 0 ID=Thaps5340;Parent=Thaps5340;rank=2 chr5 . exon 949457 949909 . + . ID=Thaps5340.2;Parent=Thaps5340;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 953248 955290 . - . ID=Thaps5342;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2N2];external_name=Thaps5342;logic_name=jgi_thaps3 chr5 ensembl transcript 953248 955290 . - . ID=Thaps5342;Parent=Thaps5342;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 953248 955290 . - 0 ID=Thaps5342;Parent=Thaps5342;rank=1 chr5 . exon 953248 955290 . - . ID=Thaps5342.1;Parent=Thaps5342;constitutive=1;rank=1 chr5 ensembl tRNA_gene 961550 961623 . + . ID=EPrTPOG00000000120;biotype=tRNA;description=tRNA-Ile for anticodon AAU [Source:TRNASCAN_SE%3BAcc:tRNA-Ile];external_name=tRNA-Ile;logic_name=ncrna_eg chr5 ensembl transcript 961550 961623 . + . ID=EPrTPOT00000000120;Parent=EPrTPOG00000000120;biotype=tRNA;logic_name=ncrna_eg chr5 . exon 961550 961623 . + . ID=EPrTPOE00000000120;Parent=EPrTPOT00000000120;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 961783 964374 . + . ID=Thaps22696;biotype=protein_coding;description=Peptidyl dipeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8C2N7];external_name=Thaps22696;logic_name=jgi_thaps3 chr5 ensembl transcript 961783 964374 . + . ID=Thaps22696;Parent=Thaps22696;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 961783 961935 . + 0 ID=Thaps22696;Parent=Thaps22696;rank=1 chr5 . exon 961783 961935 . + . ID=Thaps22696.1;Parent=Thaps22696;constitutive=1;rank=1 chr5 . CDS 962019 962430 . + 0 ID=Thaps22696;Parent=Thaps22696;rank=2 chr5 . exon 962019 962430 . + . ID=Thaps22696.2;Parent=Thaps22696;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 962626 963316 . + 0 ID=Thaps22696;Parent=Thaps22696;rank=3 chr5 . exon 962626 963316 . + . ID=Thaps22696.3;Parent=Thaps22696;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 963427 963574 . + 0 ID=Thaps22696;Parent=Thaps22696;rank=4 chr5 . exon 963427 963574 . + . ID=Thaps22696.4;Parent=Thaps22696;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 963659 963786 . + 0 ID=Thaps22696;Parent=Thaps22696;rank=5 chr5 . exon 963659 963786 . + . ID=Thaps22696.5;Parent=Thaps22696;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 963855 964374 . + 0 ID=Thaps22696;Parent=Thaps22696;rank=6 chr5 . exon 963855 964374 . + . ID=Thaps22696.6;Parent=Thaps22696;constitutive=1;ensembl_end_phase=1;rank=6 chr5 ensembl protein_coding_gene 959934 961187 . + . ID=Thaps28300;biotype=protein_coding;description=Dimethyladenosine transferase [Source:UniProtKB/TrEMBL%3BAcc:B8C2N6];external_name=Thaps28300;logic_name=jgi_thaps3 chr5 ensembl transcript 959934 961187 . + . ID=Thaps28300;Parent=Thaps28300;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 959934 960674 . + 0 ID=Thaps28300;Parent=Thaps28300;rank=1 chr5 . exon 959934 960674 . + . ID=Thaps28300.1;Parent=Thaps28300;constitutive=1;rank=1 chr5 . CDS 960787 960924 . + 0 ID=Thaps28300;Parent=Thaps28300;rank=2 chr5 . exon 960787 960924 . + . ID=Thaps28300.2;Parent=Thaps28300;constitutive=1;rank=2 chr5 . CDS 961059 961187 . + 0 ID=Thaps28300;Parent=Thaps28300;rank=3 chr5 . exon 961059 961187 . + . ID=Thaps28300.3;Parent=Thaps28300;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 964488 967618 . - . ID=Thaps40725;biotype=protein_coding;description=Cell division cycle protein 48 [Source:UniProtKB/TrEMBL%3BAcc:B8C2N8];external_name=CDC48-2;logic_name=jgi_thaps3 chr5 ensembl transcript 964488 967618 . - . ID=Thaps40725;Parent=Thaps40725;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 964488 965122 . - 0 ID=Thaps40725;Parent=Thaps40725;rank=5 chr5 . exon 964488 965122 . - . ID=Thaps40725.5;Parent=Thaps40725;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 965215 965575 . - 0 ID=Thaps40725;Parent=Thaps40725;rank=4 chr5 . exon 965215 965575 . - . ID=Thaps40725.4;Parent=Thaps40725;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 965658 966893 . - 0 ID=Thaps40725;Parent=Thaps40725;rank=3 chr5 . exon 965658 966893 . - . ID=Thaps40725.3;Parent=Thaps40725;constitutive=1;rank=3 chr5 . CDS 966948 967267 . - 0 ID=Thaps40725;Parent=Thaps40725;rank=2 chr5 . exon 966948 967267 . - . ID=Thaps40725.2;Parent=Thaps40725;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 967456 967618 . - 0 ID=Thaps40725;Parent=Thaps40725;rank=1 chr5 . exon 967456 967618 . - . ID=Thaps40725.1;Parent=Thaps40725;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 968025 970912 . - . ID=Thaps40728;biotype=protein_coding;description=V-type h-atpase [Source:UniProtKB/TrEMBL%3BAcc:B8C2N9];external_name=Thaps40728;logic_name=jgi_thaps3 chr5 ensembl transcript 968025 970912 . - . ID=Thaps40728;Parent=Thaps40728;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 968025 968626 . - 0 ID=Thaps40728;Parent=Thaps40728;rank=4 chr5 . exon 968025 968626 . - . ID=Thaps40728.4;Parent=Thaps40728;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 968789 970346 . - 0 ID=Thaps40728;Parent=Thaps40728;rank=3 chr5 . CDS 970404 970568 . - 0 ID=Thaps40728;Parent=Thaps40728;rank=2 chr5 . CDS 970796 970912 . - 0 ID=Thaps40728;Parent=Thaps40728;rank=1 chr5 . biological_region 970458 970459 0.999 + . logic_name=eponine chr5 . repeat_region 971674 971709 . ? . description=dust chr5 . repeat_region 972377 972398 . ? . description=dust chr5 . repeat_region 972377 972403 . ? . description=trf chr5 ensembl protein_coding_gene 971549 975260 . + . ID=Thaps22699;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2P0];external_name=Thaps22699;logic_name=jgi_thaps3 chr5 ensembl transcript 971549 975260 . + . ID=Thaps22699;Parent=Thaps22699;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 971549 974268 . + 0 ID=Thaps22699;Parent=Thaps22699;rank=1 chr5 . exon 971549 974268 . + . ID=Thaps22699.1;Parent=Thaps22699;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 974357 975260 . + 0 ID=Thaps22699;Parent=Thaps22699;rank=2 chr5 . exon 974357 975260 . + . ID=Thaps22699.2;Parent=Thaps22699;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 968789 970346 . - . ID=Thaps40728.3;Parent=Thaps40728;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . exon 970404 970568 . - . ID=Thaps40728.2;Parent=Thaps40728;constitutive=1;rank=2 chr5 . exon 970796 970912 . - . ID=Thaps40728.1;Parent=Thaps40728;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 975338 976979 . - . ID=Thaps5351;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2P1];external_name=Thaps5351;logic_name=jgi_thaps3 chr5 ensembl transcript 975338 976979 . - . ID=Thaps5351;Parent=Thaps5351;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 975338 975763 . - 0 ID=Thaps5351;Parent=Thaps5351;rank=2 chr5 . exon 975338 975763 . - . ID=Thaps5351.2;Parent=Thaps5351;constitutive=1;rank=2 chr5 . CDS 975849 976979 . - 0 ID=Thaps5351;Parent=Thaps5351;rank=1 chr5 . exon 975849 976979 . - . ID=Thaps5351.1;Parent=Thaps5351;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 977222 977725 . + . ID=Thaps5352;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2P2];external_name=Thaps5352;logic_name=jgi_thaps3 chr5 ensembl transcript 977222 977725 . + . ID=Thaps5352;Parent=Thaps5352;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 977222 977725 . + 0 ID=Thaps5352;Parent=Thaps5352;rank=1 chr5 . exon 977222 977725 . + . ID=Thaps5352.1;Parent=Thaps5352;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 978034 978795 . - . ID=Thaps5353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2P3];external_name=Thaps5353;logic_name=jgi_thaps3 chr5 ensembl transcript 978034 978795 . - . ID=Thaps5353;Parent=Thaps5353;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 978034 978795 . - 0 ID=Thaps5353;Parent=Thaps5353;rank=1 chr5 . exon 978034 978795 . - . ID=Thaps5353.1;Parent=Thaps5353;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 986653 987543 . - . ID=Thaps22701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2P6];external_name=Thaps22701;logic_name=jgi_thaps3 chr5 ensembl transcript 986653 987543 . - . ID=Thaps22701;Parent=Thaps22701;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 986653 987543 . - 0 ID=Thaps22701;Parent=Thaps22701;rank=1 chr5 . exon 986653 987543 . - . ID=Thaps22701.1;Parent=Thaps22701;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 982327 984109 . + . ID=Thaps262501;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2P4];external_name=Thaps262501;logic_name=jgi_thaps3 chr5 ensembl transcript 982327 984109 . + . ID=Thaps262501;Parent=Thaps262501;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 982327 982494 . + 0 ID=Thaps262501;Parent=Thaps262501;rank=1 chr5 . exon 982327 982494 . + . ID=Thaps262501.1;Parent=Thaps262501;constitutive=1;rank=1 chr5 . CDS 982573 982982 . + 0 ID=Thaps262501;Parent=Thaps262501;rank=2 chr5 . exon 982573 982982 . + . ID=Thaps262501.2;Parent=Thaps262501;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 983124 983253 . + 0 ID=Thaps262501;Parent=Thaps262501;rank=3 chr5 . exon 983124 983253 . + . ID=Thaps262501.3;Parent=Thaps262501;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 983339 984109 . + 0 ID=Thaps262501;Parent=Thaps262501;rank=4 chr5 . exon 983339 984109 . + . ID=Thaps262501.4;Parent=Thaps262501;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 985776 986485 . + . ID=Thaps262503;biotype=protein_coding;description=Thiamin pyrophosphokinase [Source:UniProtKB/TrEMBL%3BAcc:B8C2P5];external_name=Thaps262503;logic_name=jgi_thaps3 chr5 ensembl transcript 985776 986485 . + . ID=Thaps262503;Parent=Thaps262503;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 985776 986193 . + 0 ID=Thaps262503;Parent=Thaps262503;rank=1 chr5 . exon 985776 986193 . + . ID=Thaps262503.1;Parent=Thaps262503;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 986215 986485 . + 0 ID=Thaps262503;Parent=Thaps262503;rank=2 chr5 . exon 986215 986485 . + . ID=Thaps262503.2;Parent=Thaps262503;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 988084 990139 . + . ID=Thaps5357;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2P7];external_name=Thaps5357;logic_name=jgi_thaps3 chr5 ensembl transcript 988084 990139 . + . ID=Thaps5357;Parent=Thaps5357;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 988084 988677 . + 0 ID=Thaps5357;Parent=Thaps5357;rank=1 chr5 . exon 988084 988677 . + . ID=Thaps5357.1;Parent=Thaps5357;constitutive=1;rank=1 chr5 . CDS 988760 989381 . + 0 ID=Thaps5357;Parent=Thaps5357;rank=2 chr5 . CDS 989482 989806 . + 0 ID=Thaps5357;Parent=Thaps5357;rank=3 chr5 . CDS 989899 990139 . + 0 ID=Thaps5357;Parent=Thaps5357;rank=4 chr5 . repeat_region 988949 989192 . ? . description=trf chr5 . repeat_region 993368 993420 . ? . description=trf chr5 . repeat_region 993708 993750 . ? . description=trf chr5 . repeat_region 993785 993808 . ? . description=trf chr5 . repeat_region 996731 996746 . ? . description=dust chr5 ensembl protein_coding_gene 990736 991605 . - . ID=Thaps17024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2P8];external_name=Thaps17024;logic_name=jgi_thaps3 chr5 ensembl transcript 990736 991605 . - . ID=Thaps17024;Parent=Thaps17024;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 990736 991257 . - 0 ID=Thaps17024;Parent=Thaps17024;rank=2 chr5 . exon 990736 991257 . - . ID=Thaps17024.2;Parent=Thaps17024;constitutive=1;rank=2 chr5 . CDS 991339 991605 . - 0 ID=Thaps17024;Parent=Thaps17024;rank=1 chr5 . exon 991339 991605 . - . ID=Thaps17024.1;Parent=Thaps17024;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 992734 993966 . - . ID=Thaps22702;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2P9];external_name=Thaps22702;logic_name=jgi_thaps3 chr5 ensembl transcript 992734 993966 . - . ID=Thaps22702;Parent=Thaps22702;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 992734 993240 . - 0 ID=Thaps22702;Parent=Thaps22702;rank=2 chr5 . exon 992734 993240 . - . ID=Thaps22702.2;Parent=Thaps22702;constitutive=1;rank=2 chr5 . CDS 993301 993966 . - 0 ID=Thaps22702;Parent=Thaps22702;rank=1 chr5 . exon 993301 993966 . - . ID=Thaps22702.1;Parent=Thaps22702;constitutive=1;rank=1 chr5 . exon 988760 989381 . + . ID=Thaps5357.2;Parent=Thaps5357;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 989482 989806 . + . ID=Thaps5357.3;Parent=Thaps5357;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . exon 989899 990139 . + . ID=Thaps5357.4;Parent=Thaps5357;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 995370 996542 . - . ID=Thaps5360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q0];external_name=Thaps5360;logic_name=jgi_thaps3 chr5 ensembl transcript 995370 996542 . - . ID=Thaps5360;Parent=Thaps5360;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 995370 996542 . - 0 ID=Thaps5360;Parent=Thaps5360;rank=1 chr5 . exon 995370 996542 . - . ID=Thaps5360.1;Parent=Thaps5360;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 996978 998531 . + . ID=Thaps5361;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q1];external_name=Thaps5361;logic_name=jgi_thaps3 chr5 ensembl transcript 996978 998531 . + . ID=Thaps5361;Parent=Thaps5361;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 996978 998531 . + 0 ID=Thaps5361;Parent=Thaps5361;rank=1 chr5 . exon 996978 998531 . + . ID=Thaps5361.1;Parent=Thaps5361;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1003271 1004320 . - . ID=Thaps22703;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q3];external_name=Thaps22703;logic_name=jgi_thaps3 chr5 ensembl transcript 1003271 1004320 . - . ID=Thaps22703;Parent=Thaps22703;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1003271 1004320 . - 0 ID=Thaps22703;Parent=Thaps22703;rank=1 chr5 . exon 1003271 1004320 . - . ID=Thaps22703.1;Parent=Thaps22703;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1006662 1010510 . + . ID=Thaps268889;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q4];external_name=Thaps268889;logic_name=jgi_thaps3 chr5 ensembl transcript 1006662 1010510 . + . ID=Thaps268889;Parent=Thaps268889;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1006662 1006730 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=1 chr5 . exon 1006662 1006730 . + . ID=Thaps268889.1;Parent=Thaps268889;constitutive=1;rank=1 chr5 . CDS 1006828 1006851 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=2 chr5 . exon 1006828 1006851 . + . ID=Thaps268889.2;Parent=Thaps268889;constitutive=1;rank=2 chr5 . CDS 1007068 1007443 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=3 chr5 . exon 1007068 1007443 . + . ID=Thaps268889.3;Parent=Thaps268889;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1007513 1007647 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=4 chr5 . exon 1007513 1007647 . + . ID=Thaps268889.4;Parent=Thaps268889;constitutive=1;rank=4 chr5 . CDS 1008164 1008211 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=5 chr5 . exon 1008164 1008211 . + . ID=Thaps268889.5;Parent=Thaps268889;constitutive=1;rank=5 chr5 . CDS 1008289 1008336 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=6 chr5 . CDS 1008455 1008507 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=7 chr5 . CDS 1008592 1008705 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=8 chr5 . CDS 1008779 1008866 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=9 chr5 . CDS 1008940 1009499 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=10 chr5 . CDS 1009542 1009767 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=11 chr5 . CDS 1009853 1010027 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=12 chr5 . CDS 1010193 1010228 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=13 chr5 . CDS 1010312 1010510 . + 0 ID=Thaps268889;Parent=Thaps268889;rank=14 chr5 ensembl protein_coding_gene 1000197 1001828 . + . ID=Thaps5362;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q2];external_name=Thaps5362;logic_name=jgi_thaps3 chr5 ensembl transcript 1000197 1001828 . + . ID=Thaps5362;Parent=Thaps5362;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1000197 1001828 . + 0 ID=Thaps5362;Parent=Thaps5362;rank=1 chr5 . exon 1000197 1001828 . + . ID=Thaps5362.1;Parent=Thaps5362;constitutive=1;rank=1 chr5 . repeat_region 1010058 1010097 . ? . description=trf chr5 . repeat_region 1017963 1017989 . ? . description=dust chr5 . repeat_region 1017966 1017989 . ? . description=trf chr5 ensembl protein_coding_gene 1010653 1017832 . - . ID=Thaps22706;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q5];external_name=Thaps22706;logic_name=jgi_thaps3 chr5 ensembl transcript 1010653 1017832 . - . ID=Thaps22706;Parent=Thaps22706;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1010653 1011993 . - 0 ID=Thaps22706;Parent=Thaps22706;rank=9 chr5 . exon 1010653 1011993 . - . ID=Thaps22706.9;Parent=Thaps22706;constitutive=1;rank=9 chr5 . CDS 1012075 1013870 . - 0 ID=Thaps22706;Parent=Thaps22706;rank=8 chr5 . exon 1012075 1013870 . - . ID=Thaps22706.8;Parent=Thaps22706;constitutive=1;ensembl_end_phase=2;rank=8 chr5 . CDS 1014094 1014447 . - 0 ID=Thaps22706;Parent=Thaps22706;rank=7 chr5 . exon 1014094 1014447 . - . ID=Thaps22706.7;Parent=Thaps22706;constitutive=1;rank=7 chr5 . CDS 1014539 1014948 . - 0 ID=Thaps22706;Parent=Thaps22706;rank=6 chr5 . exon 1014539 1014948 . - . ID=Thaps22706.6;Parent=Thaps22706;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 1015033 1015274 . - 0 ID=Thaps22706;Parent=Thaps22706;rank=5 chr5 . exon 1015033 1015274 . - . ID=Thaps22706.5;Parent=Thaps22706;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 1015358 1015755 . - 0 ID=Thaps22706;Parent=Thaps22706;rank=4 chr5 . exon 1015358 1015755 . - . ID=Thaps22706.4;Parent=Thaps22706;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1015847 1015928 . - 0 ID=Thaps22706;Parent=Thaps22706;rank=3 chr5 . exon 1015847 1015928 . - . ID=Thaps22706.3;Parent=Thaps22706;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1016007 1017609 . - 0 ID=Thaps22706;Parent=Thaps22706;rank=2 chr5 . exon 1016007 1017609 . - . ID=Thaps22706.2;Parent=Thaps22706;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1017705 1017832 . - 0 ID=Thaps22706;Parent=Thaps22706;rank=1 chr5 . exon 1017705 1017832 . - . ID=Thaps22706.1;Parent=Thaps22706;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 1008289 1008336 . + . ID=Thaps268889.6;Parent=Thaps268889;constitutive=1;rank=6 chr5 . exon 1008455 1008507 . + . ID=Thaps268889.7;Parent=Thaps268889;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . exon 1008592 1008705 . + . ID=Thaps268889.8;Parent=Thaps268889;constitutive=1;rank=8 chr5 . exon 1008779 1008866 . + . ID=Thaps268889.9;Parent=Thaps268889;constitutive=1;ensembl_end_phase=1;rank=9 chr5 . exon 1008940 1009499 . + . ID=Thaps268889.10;Parent=Thaps268889;constitutive=1;ensembl_end_phase=2;rank=10 chr5 . exon 1009542 1009767 . + . ID=Thaps268889.11;Parent=Thaps268889;constitutive=1;ensembl_end_phase=1;rank=11 chr5 . exon 1009853 1010027 . + . ID=Thaps268889.12;Parent=Thaps268889;constitutive=1;ensembl_end_phase=1;rank=12 chr5 . exon 1010193 1010228 . + . ID=Thaps268889.13;Parent=Thaps268889;constitutive=1;rank=13 chr5 . exon 1010312 1010510 . + . ID=Thaps268889.14;Parent=Thaps268889;constitutive=1;ensembl_end_phase=1;rank=14 chr5 ensembl protein_coding_gene 1022307 1022992 . + . ID=Thaps17144;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q8];external_name=Thaps17144;logic_name=jgi_thaps3 chr5 ensembl transcript 1022307 1022992 . + . ID=Thaps17144;Parent=Thaps17144;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1022307 1022634 . + 0 ID=Thaps17144;Parent=Thaps17144;rank=1 chr5 . exon 1022307 1022634 . + . ID=Thaps17144.1;Parent=Thaps17144;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1022745 1022992 . + 0 ID=Thaps17144;Parent=Thaps17144;rank=2 chr5 . exon 1022745 1022992 . + . ID=Thaps17144.2;Parent=Thaps17144;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1020197 1020733 . + . ID=Thaps40733;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q7];external_name=Thaps40733;logic_name=jgi_thaps3 chr5 ensembl transcript 1020197 1020733 . + . ID=Thaps40733;Parent=Thaps40733;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1020197 1020480 . + 0 ID=Thaps40733;Parent=Thaps40733;rank=1 chr5 . exon 1020197 1020480 . + . ID=Thaps40733.1;Parent=Thaps40733;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1020583 1020733 . + 0 ID=Thaps40733;Parent=Thaps40733;rank=2 chr5 . exon 1020583 1020733 . + . ID=Thaps40733.2;Parent=Thaps40733;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1018670 1019434 . + . ID=Thaps5367;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q6];external_name=Thaps5367;logic_name=jgi_thaps3 chr5 ensembl transcript 1018670 1019434 . + . ID=Thaps5367;Parent=Thaps5367;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1018670 1019016 . + 0 ID=Thaps5367;Parent=Thaps5367;rank=1 chr5 . exon 1018670 1019016 . + . ID=Thaps5367.1;Parent=Thaps5367;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1019152 1019434 . + 0 ID=Thaps5367;Parent=Thaps5367;rank=2 chr5 . exon 1019152 1019434 . + . ID=Thaps5367.2;Parent=Thaps5367;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1023893 1027137 . - . ID=Thaps5370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Q9];external_name=Thaps5370;logic_name=jgi_thaps3 chr5 ensembl transcript 1023893 1027137 . - . ID=Thaps5370;Parent=Thaps5370;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1023893 1024390 . - 0 ID=Thaps5370;Parent=Thaps5370;rank=7 chr5 . exon 1023893 1024390 . - . ID=Thaps5370.7;Parent=Thaps5370;constitutive=1;rank=7 chr5 . CDS 1024630 1024926 . - 0 ID=Thaps5370;Parent=Thaps5370;rank=6 chr5 . exon 1024630 1024926 . - . ID=Thaps5370.6;Parent=Thaps5370;constitutive=1;rank=6 chr5 . CDS 1025006 1025638 . - 0 ID=Thaps5370;Parent=Thaps5370;rank=5 chr5 . exon 1025006 1025638 . - . ID=Thaps5370.5;Parent=Thaps5370;constitutive=1;rank=5 chr5 . CDS 1025736 1025802 . - 0 ID=Thaps5370;Parent=Thaps5370;rank=4 chr5 . exon 1025736 1025802 . - . ID=Thaps5370.4;Parent=Thaps5370;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1025882 1025956 . - 0 ID=Thaps5370;Parent=Thaps5370;rank=3 chr5 . exon 1025882 1025956 . - . ID=Thaps5370.3;Parent=Thaps5370;constitutive=1;rank=3 chr5 . CDS 1026189 1026889 . - 0 ID=Thaps5370;Parent=Thaps5370;rank=2 chr5 . exon 1026189 1026889 . - . ID=Thaps5370.2;Parent=Thaps5370;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1027075 1027137 . - 0 ID=Thaps5370;Parent=Thaps5370;rank=1 chr5 . exon 1027075 1027137 . - . ID=Thaps5370.1;Parent=Thaps5370;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1027525 1029947 . + . ID=Thaps5371;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R0];external_name=Thaps5371;logic_name=jgi_thaps3 chr5 ensembl transcript 1027525 1029947 . + . ID=Thaps5371;Parent=Thaps5371;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1027525 1028023 . + 0 ID=Thaps5371;Parent=Thaps5371;rank=1 chr5 . exon 1027525 1028023 . + . ID=Thaps5371.1;Parent=Thaps5371;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1028094 1028462 . + 0 ID=Thaps5371;Parent=Thaps5371;rank=2 chr5 . exon 1028094 1028462 . + . ID=Thaps5371.2;Parent=Thaps5371;constitutive=1;rank=2 chr5 . CDS 1028544 1028602 . + 0 ID=Thaps5371;Parent=Thaps5371;rank=3 chr5 . CDS 1028678 1028953 . + 0 ID=Thaps5371;Parent=Thaps5371;rank=4 chr5 . CDS 1029030 1029670 . + 0 ID=Thaps5371;Parent=Thaps5371;rank=5 chr5 . CDS 1029692 1029947 . + 0 ID=Thaps5371;Parent=Thaps5371;rank=6 chr5 . repeat_region 1028469 1028510 . ? . description=trf chr5 . repeat_region 1030072 1030080 . ? . description=dust chr5 ensembl protein_coding_gene 1030226 1032949 . - . ID=Thaps22708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R1];external_name=Thaps22708;logic_name=jgi_thaps3 chr5 ensembl transcript 1030226 1032949 . - . ID=Thaps22708;Parent=Thaps22708;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1030226 1031698 . - 0 ID=Thaps22708;Parent=Thaps22708;rank=5 chr5 . exon 1030226 1031698 . - . ID=Thaps22708.5;Parent=Thaps22708;constitutive=1;rank=5 chr5 . CDS 1031850 1031885 . - 0 ID=Thaps22708;Parent=Thaps22708;rank=4 chr5 . exon 1031850 1031885 . - . ID=Thaps22708.4;Parent=Thaps22708;constitutive=1;rank=4 chr5 . CDS 1031954 1031995 . - 0 ID=Thaps22708;Parent=Thaps22708;rank=3 chr5 . exon 1031954 1031995 . - . ID=Thaps22708.3;Parent=Thaps22708;constitutive=1;rank=3 chr5 . CDS 1032043 1032103 . - 0 ID=Thaps22708;Parent=Thaps22708;rank=2 chr5 . exon 1032043 1032103 . - . ID=Thaps22708.2;Parent=Thaps22708;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1032186 1032949 . - 0 ID=Thaps22708;Parent=Thaps22708;rank=1 chr5 . exon 1032186 1032949 . - . ID=Thaps22708.1;Parent=Thaps22708;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1033294 1035888 . + . ID=Thaps22709;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R2];external_name=Thaps22709;logic_name=jgi_thaps3 chr5 ensembl transcript 1033294 1035888 . + . ID=Thaps22709;Parent=Thaps22709;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1033294 1033739 . + 0 ID=Thaps22709;Parent=Thaps22709;rank=1 chr5 . exon 1033294 1033739 . + . ID=Thaps22709.1;Parent=Thaps22709;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1033891 1033958 . + 0 ID=Thaps22709;Parent=Thaps22709;rank=2 chr5 . exon 1033891 1033958 . + . ID=Thaps22709.2;Parent=Thaps22709;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1034072 1035632 . + 0 ID=Thaps22709;Parent=Thaps22709;rank=3 chr5 . exon 1034072 1035632 . + . ID=Thaps22709.3;Parent=Thaps22709;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1035660 1035888 . + 0 ID=Thaps22709;Parent=Thaps22709;rank=4 chr5 . exon 1035660 1035888 . + . ID=Thaps22709.4;Parent=Thaps22709;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 1036312 1037886 . + . ID=Thaps22710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R3];external_name=Thaps22710;logic_name=jgi_thaps3 chr5 ensembl transcript 1036312 1037886 . + . ID=Thaps22710;Parent=Thaps22710;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1036312 1037886 . + 0 ID=Thaps22710;Parent=Thaps22710;rank=1 chr5 . exon 1036312 1037886 . + . ID=Thaps22710.1;Parent=Thaps22710;constitutive=1;rank=1 chr5 . exon 1028544 1028602 . + . ID=Thaps5371.3;Parent=Thaps5371;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . exon 1028678 1028953 . + . ID=Thaps5371.4;Parent=Thaps5371;constitutive=1;rank=4 chr5 . exon 1029030 1029670 . + . ID=Thaps5371.5;Parent=Thaps5371;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . exon 1029692 1029947 . + . ID=Thaps5371.6;Parent=Thaps5371;constitutive=1;ensembl_end_phase=1;rank=6 chr5 ensembl tRNA_gene 1038366 1038439 . - . ID=EPrTPOG00000000036;biotype=tRNA;description=tRNA-Ile for anticodon AAU [Source:TRNASCAN_SE%3BAcc:tRNA-Ile];external_name=tRNA-Ile;logic_name=ncrna_eg chr5 ensembl transcript 1038366 1038439 . - . ID=EPrTPOT00000000030;Parent=EPrTPOG00000000036;biotype=tRNA;logic_name=ncrna_eg chr5 ensembl tRNA_gene 1038244 1038341 . - . ID=EPrTPOG00000000093;biotype=tRNA;description=tRNA-Tyr for anticodon GUA [Source:TRNASCAN_SE%3BAcc:tRNA-Tyr];external_name=tRNA-Tyr;logic_name=ncrna_eg chr5 ensembl transcript 1038244 1038341 . - . ID=EPrTPOT00000000093;Parent=EPrTPOG00000000093;biotype=tRNA;logic_name=ncrna_eg chr5 . exon 1038366 1038439 . - . ID=EPrTPOE00000000036;Parent=EPrTPOT00000000030;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 1038244 1038341 . - . ID=EPrTPOE00000000093;Parent=EPrTPOT00000000093;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1039982 1040650 . + . ID=Thaps22711;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R4];external_name=Thaps22711;logic_name=jgi_thaps3 chr5 ensembl transcript 1039982 1040650 . + . ID=Thaps22711;Parent=Thaps22711;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1039982 1040650 . + 0 ID=Thaps22711;Parent=Thaps22711;rank=1 chr5 . exon 1039982 1040650 . + . ID=Thaps22711.1;Parent=Thaps22711;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1041794 1042210 . - . ID=Thaps22712;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R5];external_name=Thaps22712;logic_name=jgi_thaps3 chr5 ensembl transcript 1041794 1042210 . - . ID=Thaps22712;Parent=Thaps22712;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1041794 1042210 . - 0 ID=Thaps22712;Parent=Thaps22712;rank=1 chr5 . exon 1041794 1042210 . - . ID=Thaps22712.1;Parent=Thaps22712;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1046610 1048122 . - . ID=Thaps262506;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R7];external_name=Thaps262506;logic_name=jgi_thaps3 chr5 ensembl transcript 1046610 1048122 . - . ID=Thaps262506;Parent=Thaps262506;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1046610 1047108 . - 0 ID=Thaps262506;Parent=Thaps262506;rank=3 chr5 . exon 1046610 1047108 . - . ID=Thaps262506.3;Parent=Thaps262506;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1047211 1047534 . - 0 ID=Thaps262506;Parent=Thaps262506;rank=2 chr5 . exon 1047211 1047534 . - . ID=Thaps262506.2;Parent=Thaps262506;constitutive=1;rank=2 chr5 . CDS 1047598 1048122 . - 0 ID=Thaps262506;Parent=Thaps262506;rank=1 chr5 . exon 1047598 1048122 . - . ID=Thaps262506.1;Parent=Thaps262506;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1042806 1043753 . + . ID=Thaps5377;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R6];external_name=Thaps5377;logic_name=jgi_thaps3 chr5 ensembl transcript 1042806 1043753 . + . ID=Thaps5377;Parent=Thaps5377;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1042806 1043753 . + 0 ID=Thaps5377;Parent=Thaps5377;rank=1 chr5 . exon 1042806 1043753 . + . ID=Thaps5377.1;Parent=Thaps5377;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1048538 1049976 . - . ID=Thaps5380;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R8];external_name=Thaps5380;logic_name=jgi_thaps3 chr5 ensembl transcript 1048538 1049976 . - . ID=Thaps5380;Parent=Thaps5380;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1048538 1049045 . - 0 ID=Thaps5380;Parent=Thaps5380;rank=4 chr5 . exon 1048538 1049045 . - . ID=Thaps5380.4;Parent=Thaps5380;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1049146 1049258 . - 0 ID=Thaps5380;Parent=Thaps5380;rank=3 chr5 . exon 1049146 1049258 . - . ID=Thaps5380.3;Parent=Thaps5380;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1049389 1049491 . - 0 ID=Thaps5380;Parent=Thaps5380;rank=2 chr5 . exon 1049389 1049491 . - . ID=Thaps5380.2;Parent=Thaps5380;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1049621 1049976 . - 0 ID=Thaps5380;Parent=Thaps5380;rank=1 chr5 . exon 1049621 1049976 . - . ID=Thaps5380.1;Parent=Thaps5380;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1050577 1051305 . + . ID=Thaps5381;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2R9];external_name=Thaps5381;logic_name=jgi_thaps3 chr5 ensembl transcript 1050577 1051305 . + . ID=Thaps5381;Parent=Thaps5381;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1050577 1050763 . + 0 ID=Thaps5381;Parent=Thaps5381;rank=1 chr5 . exon 1050577 1050763 . + . ID=Thaps5381.1;Parent=Thaps5381;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1050820 1050963 . + 0 ID=Thaps5381;Parent=Thaps5381;rank=2 chr5 . exon 1050820 1050963 . + . ID=Thaps5381.2;Parent=Thaps5381;constitutive=1;rank=2 chr5 . CDS 1051034 1051305 . + 0 ID=Thaps5381;Parent=Thaps5381;rank=3 chr5 . exon 1051034 1051305 . + . ID=Thaps5381.3;Parent=Thaps5381;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 1061307 1062354 . + . ID=Thaps16961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2S1];external_name=Thaps16961;logic_name=jgi_thaps3 chr5 ensembl transcript 1061307 1062354 . + . ID=Thaps16961;Parent=Thaps16961;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1061307 1061555 . + 0 ID=Thaps16961;Parent=Thaps16961;rank=1 chr5 . exon 1061307 1061555 . + . ID=Thaps16961.1;Parent=Thaps16961;constitutive=1;rank=1 chr5 . CDS 1061638 1061866 . + 0 ID=Thaps16961;Parent=Thaps16961;rank=2 chr5 . exon 1061638 1061866 . + . ID=Thaps16961.2;Parent=Thaps16961;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1061943 1062035 . + 0 ID=Thaps16961;Parent=Thaps16961;rank=3 chr5 . exon 1061943 1062035 . + . ID=Thaps16961.3;Parent=Thaps16961;constitutive=1;rank=3 chr5 . CDS 1062158 1062354 . + 0 ID=Thaps16961;Parent=Thaps16961;rank=4 chr5 . exon 1062158 1062354 . + . ID=Thaps16961.4;Parent=Thaps16961;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 1058276 1060294 . - . ID=Thaps22713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2S0];external_name=Thaps22713;logic_name=jgi_thaps3 chr5 ensembl transcript 1058276 1060294 . - . ID=Thaps22713;Parent=Thaps22713;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1058276 1060294 . - 0 ID=Thaps22713;Parent=Thaps22713;rank=1 chr5 . exon 1058276 1060294 . - . ID=Thaps22713.1;Parent=Thaps22713;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1062829 1064061 . - . ID=Thaps22714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2S2];external_name=Thaps22714;logic_name=jgi_thaps3 chr5 ensembl transcript 1062829 1064061 . - . ID=Thaps22714;Parent=Thaps22714;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1062829 1064061 . - 0 ID=Thaps22714;Parent=Thaps22714;rank=1 chr5 . exon 1062829 1064061 . - . ID=Thaps22714.1;Parent=Thaps22714;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1065481 1067812 . + . ID=Thaps268890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2S3];external_name=Thaps268890;logic_name=jgi_thaps3 chr5 ensembl transcript 1065481 1067812 . + . ID=Thaps268890;Parent=Thaps268890;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1065481 1066036 . + 0 ID=Thaps268890;Parent=Thaps268890;rank=1 chr5 . exon 1065481 1066036 . + . ID=Thaps268890.1;Parent=Thaps268890;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1066110 1066144 . + 0 ID=Thaps268890;Parent=Thaps268890;rank=2 chr5 . exon 1066110 1066144 . + . ID=Thaps268890.2;Parent=Thaps268890;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1066227 1066433 . + 0 ID=Thaps268890;Parent=Thaps268890;rank=3 chr5 . exon 1066227 1066433 . + . ID=Thaps268890.3;Parent=Thaps268890;constitutive=1;rank=3 chr5 . CDS 1066525 1066564 . + 0 ID=Thaps268890;Parent=Thaps268890;rank=4 chr5 . exon 1066525 1066564 . + . ID=Thaps268890.4;Parent=Thaps268890;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1066643 1066797 . + 0 ID=Thaps268890;Parent=Thaps268890;rank=5 chr5 . exon 1066643 1066797 . + . ID=Thaps268890.5;Parent=Thaps268890;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 1066870 1067195 . + 0 ID=Thaps268890;Parent=Thaps268890;rank=6 chr5 . exon 1066870 1067195 . + . ID=Thaps268890.6;Parent=Thaps268890;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 1067282 1067324 . + 0 ID=Thaps268890;Parent=Thaps268890;rank=7 chr5 . exon 1067282 1067324 . + . ID=Thaps268890.7;Parent=Thaps268890;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 1067411 1067812 . + 0 ID=Thaps268890;Parent=Thaps268890;rank=8 chr5 . exon 1067411 1067812 . + . ID=Thaps268890.8;Parent=Thaps268890;constitutive=1;rank=8 chr5 . repeat_region 1070018 1070074 . ? . description=dust chr5 . repeat_region 1070031 1070060 . ? . description=trf chr5 . repeat_region 1074974 1074992 . ? . description=dust chr5 ensembl protein_coding_gene 1075141 1078376 . + . ID=Thaps22716;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2S7];external_name=Thaps22716;logic_name=jgi_thaps3 chr5 ensembl transcript 1075141 1078376 . + . ID=Thaps22716;Parent=Thaps22716;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1075141 1076361 . + 0 ID=Thaps22716;Parent=Thaps22716;rank=1 chr5 . exon 1075141 1076361 . + . ID=Thaps22716.1;Parent=Thaps22716;constitutive=1;rank=1 chr5 . CDS 1076447 1076487 . + 0 ID=Thaps22716;Parent=Thaps22716;rank=2 chr5 . exon 1076447 1076487 . + . ID=Thaps22716.2;Parent=Thaps22716;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1076607 1077432 . + 0 ID=Thaps22716;Parent=Thaps22716;rank=3 chr5 . exon 1076607 1077432 . + . ID=Thaps22716.3;Parent=Thaps22716;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1077511 1077544 . + 0 ID=Thaps22716;Parent=Thaps22716;rank=4 chr5 . exon 1077511 1077544 . + . ID=Thaps22716.4;Parent=Thaps22716;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1077625 1077941 . + 0 ID=Thaps22716;Parent=Thaps22716;rank=5 chr5 . exon 1077625 1077941 . + . ID=Thaps22716.5;Parent=Thaps22716;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 1078020 1078376 . + 0 ID=Thaps22716;Parent=Thaps22716;rank=6 chr5 . exon 1078020 1078376 . + . ID=Thaps22716.6;Parent=Thaps22716;constitutive=1;rank=6 chr5 ensembl protein_coding_gene 1073255 1074841 . - . ID=Thaps262510;biotype=protein_coding;external_name=Thaps262510;logic_name=jgi_thaps3 chr5 ensembl transcript 1073255 1074841 . - . ID=Thaps262510;Parent=Thaps262510;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1073255 1073707 . - 0 ID=Thaps262510;Parent=Thaps262510;rank=5 chr5 . exon 1073255 1073707 . - . ID=Thaps262510.5;Parent=Thaps262510;constitutive=1;rank=5 chr5 . CDS 1073741 1073947 . - 0 ID=Thaps262510;Parent=Thaps262510;rank=4 chr5 . exon 1073741 1073947 . - . ID=Thaps262510.4;Parent=Thaps262510;constitutive=1;rank=4 chr5 . CDS 1073963 1074371 . - 0 ID=Thaps262510;Parent=Thaps262510;rank=3 chr5 . exon 1073963 1074371 . - . ID=Thaps262510.3;Parent=Thaps262510;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1074390 1074499 . - 0 ID=Thaps262510;Parent=Thaps262510;rank=2 chr5 . exon 1074390 1074499 . - . ID=Thaps262510.2;Parent=Thaps262510;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1074623 1074841 . - 0 ID=Thaps262510;Parent=Thaps262510;rank=1 chr5 . exon 1074623 1074841 . - . ID=Thaps262510.1;Parent=Thaps262510;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1070804 1071697 . + . ID=Thaps5387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2S4];external_name=Thaps5387;logic_name=jgi_thaps3 chr5 ensembl transcript 1070804 1071697 . + . ID=Thaps5387;Parent=Thaps5387;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1070804 1071697 . + 0 ID=Thaps5387;Parent=Thaps5387;rank=1 chr5 . exon 1070804 1071697 . + . ID=Thaps5387.1;Parent=Thaps5387;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1071857 1072942 . - . ID=Thaps5388;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2S5];external_name=Thaps5388;logic_name=jgi_thaps3 chr5 ensembl transcript 1071857 1072942 . - . ID=Thaps5388;Parent=Thaps5388;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1071857 1072942 . - 0 ID=Thaps5388;Parent=Thaps5388;rank=1 chr5 . exon 1071857 1072942 . - . ID=Thaps5388.1;Parent=Thaps5388;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1088134 1089802 . + . ID=Thaps22720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2T1];external_name=Thaps22720;logic_name=jgi_thaps3 chr5 ensembl transcript 1088134 1089802 . + . ID=Thaps22720;Parent=Thaps22720;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1088134 1089649 . + 0 ID=Thaps22720;Parent=Thaps22720;rank=1 chr5 . exon 1088134 1089649 . + . ID=Thaps22720.1;Parent=Thaps22720;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1089723 1089802 . + 0 ID=Thaps22720;Parent=Thaps22720;rank=2 chr5 ensembl protein_coding_gene 1080044 1083960 . + . ID=Thaps34228;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2S8];external_name=Thaps34228;logic_name=jgi_thaps3 chr5 ensembl transcript 1080044 1083960 . + . ID=Thaps34228;Parent=Thaps34228;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1080044 1080137 . + 0 ID=Thaps34228;Parent=Thaps34228;rank=1 chr5 . exon 1080044 1080137 . + . ID=Thaps34228.1;Parent=Thaps34228;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1080294 1080386 . + 0 ID=Thaps34228;Parent=Thaps34228;rank=2 chr5 . exon 1080294 1080386 . + . ID=Thaps34228.2;Parent=Thaps34228;constitutive=1;rank=2 chr5 . CDS 1080459 1080730 . + 0 ID=Thaps34228;Parent=Thaps34228;rank=3 chr5 . exon 1080459 1080730 . + . ID=Thaps34228.3;Parent=Thaps34228;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1080813 1081541 . + 0 ID=Thaps34228;Parent=Thaps34228;rank=4 chr5 . exon 1080813 1081541 . + . ID=Thaps34228.4;Parent=Thaps34228;constitutive=1;rank=4 chr5 . CDS 1081587 1082445 . + 0 ID=Thaps34228;Parent=Thaps34228;rank=5 chr5 . exon 1081587 1082445 . + . ID=Thaps34228.5;Parent=Thaps34228;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1082522 1083960 . + 0 ID=Thaps34228;Parent=Thaps34228;rank=6 chr5 . exon 1082522 1083960 . + . ID=Thaps34228.6;Parent=Thaps34228;constitutive=1;ensembl_end_phase=2;rank=6 chr5 ensembl protein_coding_gene 1084238 1086693 . + . ID=Thaps5393;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2S9];external_name=Thaps5393;logic_name=jgi_thaps3 chr5 ensembl transcript 1084238 1086693 . + . ID=Thaps5393;Parent=Thaps5393;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1084238 1084615 . + 0 ID=Thaps5393;Parent=Thaps5393;rank=1 chr5 . exon 1084238 1084615 . + . ID=Thaps5393.1;Parent=Thaps5393;constitutive=1;rank=1 chr5 . CDS 1084645 1086693 . + 0 ID=Thaps5393;Parent=Thaps5393;rank=2 chr5 . exon 1084645 1086693 . + . ID=Thaps5393.2;Parent=Thaps5393;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1086757 1087811 . - . ID=Thaps5394;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2T0];external_name=Thaps5394;logic_name=jgi_thaps3 chr5 ensembl transcript 1086757 1087811 . - . ID=Thaps5394;Parent=Thaps5394;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1086757 1086975 . - 0 ID=Thaps5394;Parent=Thaps5394;rank=3 chr5 . exon 1086757 1086975 . - . ID=Thaps5394.3;Parent=Thaps5394;constitutive=1;rank=3 chr5 . CDS 1087059 1087166 . - 0 ID=Thaps5394;Parent=Thaps5394;rank=2 chr5 . exon 1087059 1087166 . - . ID=Thaps5394.2;Parent=Thaps5394;constitutive=1;rank=2 chr5 . CDS 1087257 1087811 . - 0 ID=Thaps5394;Parent=Thaps5394;rank=1 chr5 . exon 1087257 1087811 . - . ID=Thaps5394.1;Parent=Thaps5394;constitutive=1;rank=1 chr5 . repeat_region 1088494 1088501 . ? . description=dust chr5 . repeat_region 1094435 1094442 . ? . description=dust chr5 . repeat_region 1095520 1095527 . ? . description=dust chr5 . repeat_region 1095689 1095708 . ? . description=trf chr5 . repeat_region 1095689 1095708 . ? . description=dust chr5 . exon 1089723 1089802 . + . ID=Thaps22720.2;Parent=Thaps22720;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1090098 1091906 . - . ID=Thaps22721;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2T2];external_name=Thaps22721;logic_name=jgi_thaps3 chr5 ensembl transcript 1090098 1091906 . - . ID=Thaps22721;Parent=Thaps22721;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1090098 1091906 . - 0 ID=Thaps22721;Parent=Thaps22721;rank=1 chr5 . exon 1090098 1091906 . - . ID=Thaps22721.1;Parent=Thaps22721;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1096669 1097277 . - . ID=Thaps262512;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2T3];external_name=Thaps262512;logic_name=jgi_thaps3 chr5 ensembl transcript 1096669 1097277 . - . ID=Thaps262512;Parent=Thaps262512;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1096669 1097277 . - 0 ID=Thaps262512;Parent=Thaps262512;rank=1 chr5 . exon 1096669 1097277 . - . ID=Thaps262512.1;Parent=Thaps262512;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1107852 1108675 . - . ID=Thaps22722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2T8];external_name=Thaps22722;logic_name=jgi_thaps3 chr5 ensembl transcript 1107852 1108675 . - . ID=Thaps22722;Parent=Thaps22722;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1107852 1107974 . - 0 ID=Thaps22722;Parent=Thaps22722;rank=2 chr5 . exon 1107852 1107974 . - . ID=Thaps22722.2;Parent=Thaps22722;constitutive=1;rank=2 chr5 . CDS 1108100 1108675 . - 0 ID=Thaps22722;Parent=Thaps22722;rank=1 chr5 . exon 1108100 1108675 . - . ID=Thaps22722.1;Parent=Thaps22722;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1098909 1099858 . + . ID=Thaps262513;biotype=protein_coding;description=Replication protein A2 [Source:UniProtKB/TrEMBL%3BAcc:B8C2T4];external_name=RPA2_2;logic_name=jgi_thaps3 chr5 ensembl transcript 1098909 1099858 . + . ID=Thaps262513;Parent=Thaps262513;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1098909 1099623 . + 0 ID=Thaps262513;Parent=Thaps262513;rank=1 chr5 . exon 1098909 1099623 . + . ID=Thaps262513.1;Parent=Thaps262513;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1099710 1099858 . + 0 ID=Thaps262513;Parent=Thaps262513;rank=2 chr5 . exon 1099710 1099858 . + . ID=Thaps262513.2;Parent=Thaps262513;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1100931 1101847 . - . ID=Thaps262514;biotype=protein_coding;description=HAL3 halotolerance protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2T5];external_name=HAL3;logic_name=jgi_thaps3 chr5 ensembl transcript 1100931 1101847 . - . ID=Thaps262514;Parent=Thaps262514;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1100931 1101014 . - 0 ID=Thaps262514;Parent=Thaps262514;rank=4 chr5 . exon 1100931 1101014 . - . ID=Thaps262514.4;Parent=Thaps262514;constitutive=1;rank=4 chr5 . CDS 1101078 1101152 . - 0 ID=Thaps262514;Parent=Thaps262514;rank=3 chr5 . exon 1101078 1101152 . - . ID=Thaps262514.3;Parent=Thaps262514;constitutive=1;rank=3 chr5 . CDS 1101225 1101395 . - 0 ID=Thaps262514;Parent=Thaps262514;rank=2 chr5 . exon 1101225 1101395 . - . ID=Thaps262514.2;Parent=Thaps262514;constitutive=1;rank=2 chr5 . CDS 1101646 1101847 . - 0 ID=Thaps262514;Parent=Thaps262514;rank=1 chr5 . exon 1101646 1101847 . - . ID=Thaps262514.1;Parent=Thaps262514;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1102090 1105090 . + . ID=Thaps5400;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2T6];external_name=Thaps5400;logic_name=jgi_thaps3 chr5 ensembl transcript 1102090 1105090 . + . ID=Thaps5400;Parent=Thaps5400;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1102090 1104624 . + 0 ID=Thaps5400;Parent=Thaps5400;rank=1 chr5 . exon 1102090 1104624 . + . ID=Thaps5400.1;Parent=Thaps5400;constitutive=1;rank=1 chr5 . CDS 1104701 1105090 . + 0 ID=Thaps5400;Parent=Thaps5400;rank=2 chr5 . exon 1104701 1105090 . + . ID=Thaps5400.2;Parent=Thaps5400;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1105302 1107381 . - . ID=Thaps5401;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2T7];external_name=Thaps5401;logic_name=jgi_thaps3 chr5 ensembl transcript 1105302 1107381 . - . ID=Thaps5401;Parent=Thaps5401;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1105302 1106105 . - 0 ID=Thaps5401;Parent=Thaps5401;rank=2 chr5 . exon 1105302 1106105 . - . ID=Thaps5401.2;Parent=Thaps5401;constitutive=1;rank=2 chr5 . CDS 1106125 1107381 . - 0 ID=Thaps5401;Parent=Thaps5401;rank=1 chr5 . exon 1106125 1107381 . - . ID=Thaps5401.1;Parent=Thaps5401;constitutive=1;rank=1 chr5 . repeat_region 1109035 1109061 . ? . description=trf chr5 ensembl protein_coding_gene 1109152 1113110 . + . ID=Thaps22723;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2T9];external_name=Thaps22723;logic_name=jgi_thaps3 chr5 ensembl transcript 1109152 1113110 . + . ID=Thaps22723;Parent=Thaps22723;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1109152 1110695 . + 0 ID=Thaps22723;Parent=Thaps22723;rank=1 chr5 . exon 1109152 1110695 . + . ID=Thaps22723.1;Parent=Thaps22723;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1110779 1112069 . + 0 ID=Thaps22723;Parent=Thaps22723;rank=2 chr5 . exon 1110779 1112069 . + . ID=Thaps22723.2;Parent=Thaps22723;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1112144 1112391 . + 0 ID=Thaps22723;Parent=Thaps22723;rank=3 chr5 . exon 1112144 1112391 . + . ID=Thaps22723.3;Parent=Thaps22723;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1112469 1112933 . + 0 ID=Thaps22723;Parent=Thaps22723;rank=4 chr5 . exon 1112469 1112933 . + . ID=Thaps22723.4;Parent=Thaps22723;constitutive=1;rank=4 chr5 . CDS 1113089 1113110 . + 0 ID=Thaps22723;Parent=Thaps22723;rank=5 chr5 . exon 1113089 1113110 . + . ID=Thaps22723.5;Parent=Thaps22723;constitutive=1;ensembl_end_phase=1;rank=5 chr5 ensembl protein_coding_gene 1113168 1114869 . - . ID=Thaps262515;biotype=protein_coding;description=Cln3-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2U0];external_name=Thaps262515;logic_name=jgi_thaps3 chr5 ensembl transcript 1113168 1114869 . - . ID=Thaps262515;Parent=Thaps262515;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1113168 1113497 . - 0 ID=Thaps262515;Parent=Thaps262515;rank=6 chr5 . exon 1113168 1113497 . - . ID=Thaps262515.6;Parent=Thaps262515;constitutive=1;rank=6 chr5 . CDS 1113605 1113840 . - 0 ID=Thaps262515;Parent=Thaps262515;rank=5 chr5 . exon 1113605 1113840 . - . ID=Thaps262515.5;Parent=Thaps262515;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 1113976 1114141 . - 0 ID=Thaps262515;Parent=Thaps262515;rank=4 chr5 . exon 1113976 1114141 . - . ID=Thaps262515.4;Parent=Thaps262515;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1114298 1114336 . - 0 ID=Thaps262515;Parent=Thaps262515;rank=3 chr5 . exon 1114298 1114336 . - . ID=Thaps262515.3;Parent=Thaps262515;constitutive=1;rank=3 chr5 . CDS 1114417 1114489 . - 0 ID=Thaps262515;Parent=Thaps262515;rank=2 chr5 . exon 1114417 1114489 . - . ID=Thaps262515.2;Parent=Thaps262515;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1114571 1114869 . - 0 ID=Thaps262515;Parent=Thaps262515;rank=1 chr5 . exon 1114571 1114869 . - . ID=Thaps262515.1;Parent=Thaps262515;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1115500 1116579 . - . ID=Thaps5405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2U1];external_name=Thaps5405;logic_name=jgi_thaps3 chr5 ensembl transcript 1115500 1116579 . - . ID=Thaps5405;Parent=Thaps5405;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1115500 1116579 . - 0 ID=Thaps5405;Parent=Thaps5405;rank=1 chr5 . exon 1115500 1116579 . - . ID=Thaps5405.1;Parent=Thaps5405;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1119186 1119877 . + . ID=Thaps262516;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2U2];external_name=Thaps262516;logic_name=jgi_thaps3 chr5 ensembl transcript 1119186 1119877 . + . ID=Thaps262516;Parent=Thaps262516;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1119186 1119877 . + 0 ID=Thaps262516;Parent=Thaps262516;rank=1 chr5 . exon 1119186 1119877 . + . ID=Thaps262516.1;Parent=Thaps262516;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1120378 1121710 . + . ID=Thaps262517;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2U3];external_name=Thaps262517;logic_name=jgi_thaps3 chr5 ensembl transcript 1120378 1121710 . + . ID=Thaps262517;Parent=Thaps262517;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1120378 1120565 . + 0 ID=Thaps262517;Parent=Thaps262517;rank=1 chr5 . exon 1120378 1120565 . + . ID=Thaps262517.1;Parent=Thaps262517;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1120645 1120685 . + 0 ID=Thaps262517;Parent=Thaps262517;rank=2 chr5 . exon 1120645 1120685 . + . ID=Thaps262517.2;Parent=Thaps262517;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1120733 1121053 . + 0 ID=Thaps262517;Parent=Thaps262517;rank=3 chr5 . exon 1120733 1121053 . + . ID=Thaps262517.3;Parent=Thaps262517;constitutive=1;rank=3 chr5 . CDS 1121137 1121710 . + 0 ID=Thaps262517;Parent=Thaps262517;rank=4 chr5 . exon 1121137 1121710 . + . ID=Thaps262517.4;Parent=Thaps262517;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 1121999 1123683 . - . ID=Thaps34170;biotype=protein_coding;description=Probable aspartyl aminopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8C2U4];external_name=Thaps34170;logic_name=jgi_thaps3 chr5 ensembl transcript 1121999 1123683 . - . ID=Thaps34170;Parent=Thaps34170;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1121999 1123000 . - 0 ID=Thaps34170;Parent=Thaps34170;rank=3 chr5 . exon 1121999 1123000 . - . ID=Thaps34170.3;Parent=Thaps34170;constitutive=1;rank=3 chr5 . CDS 1123121 1123181 . - 0 ID=Thaps34170;Parent=Thaps34170;rank=2 chr5 . exon 1123121 1123181 . - . ID=Thaps34170.2;Parent=Thaps34170;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1123277 1123683 . - 0 ID=Thaps34170;Parent=Thaps34170;rank=1 chr5 . exon 1123277 1123683 . - . ID=Thaps34170.1;Parent=Thaps34170;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1127522 1128874 . + . ID=Thaps34518;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2U5];external_name=Thaps34518;logic_name=jgi_thaps3 chr5 ensembl transcript 1127522 1128874 . + . ID=Thaps34518;Parent=Thaps34518;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1127522 1127968 . + 0 ID=Thaps34518;Parent=Thaps34518;rank=1 chr5 . exon 1127522 1127968 . + . ID=Thaps34518.1;Parent=Thaps34518;constitutive=1;rank=1 chr5 . CDS 1128059 1128874 . + 0 ID=Thaps34518;Parent=Thaps34518;rank=2 chr5 . exon 1128059 1128874 . + . ID=Thaps34518.2;Parent=Thaps34518;constitutive=1;rank=2 chr5 . repeat_region 1131149 1131177 . ? . description=trf chr5 . repeat_region 1131150 1131184 . ? . description=trf chr5 . repeat_region 1131317 1131338 . ? . description=dust chr5 . repeat_region 1131317 1131342 . ? . description=trf chr5 . repeat_region 1132400 1132443 . ? . description=trf chr5 ensembl protein_coding_gene 1129289 1130904 . - . ID=Thaps5409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2U6];external_name=Thaps5409;logic_name=jgi_thaps3 chr5 ensembl transcript 1129289 1130904 . - . ID=Thaps5409;Parent=Thaps5409;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1129289 1129443 . - 0 ID=Thaps5409;Parent=Thaps5409;rank=4 chr5 . exon 1129289 1129443 . - . ID=Thaps5409.4;Parent=Thaps5409;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1129796 1130391 . - 0 ID=Thaps5409;Parent=Thaps5409;rank=3 chr5 . exon 1129796 1130391 . - . ID=Thaps5409.3;Parent=Thaps5409;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1130430 1130531 . - 0 ID=Thaps5409;Parent=Thaps5409;rank=2 chr5 . exon 1130430 1130531 . - . ID=Thaps5409.2;Parent=Thaps5409;constitutive=1;rank=2 chr5 . CDS 1130753 1130904 . - 0 ID=Thaps5409;Parent=Thaps5409;rank=1 chr5 . exon 1130753 1130904 . - . ID=Thaps5409.1;Parent=Thaps5409;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1131341 1138723 . + . ID=Thaps5410;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2U7];external_name=Thaps5410;logic_name=jgi_thaps3 chr5 ensembl transcript 1131341 1138723 . + . ID=Thaps5410;Parent=Thaps5410;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1131341 1134706 . + 0 ID=Thaps5410;Parent=Thaps5410;rank=1 chr5 . exon 1131341 1134706 . + . ID=Thaps5410.1;Parent=Thaps5410;constitutive=1;rank=1 chr5 . CDS 1134781 1136049 . + 0 ID=Thaps5410;Parent=Thaps5410;rank=2 chr5 . exon 1134781 1136049 . + . ID=Thaps5410.2;Parent=Thaps5410;constitutive=1;rank=2 chr5 . CDS 1136130 1136642 . + 0 ID=Thaps5410;Parent=Thaps5410;rank=3 chr5 . exon 1136130 1136642 . + . ID=Thaps5410.3;Parent=Thaps5410;constitutive=1;rank=3 chr5 . CDS 1136721 1138665 . + 0 ID=Thaps5410;Parent=Thaps5410;rank=4 chr5 . exon 1136721 1138665 . + . ID=Thaps5410.4;Parent=Thaps5410;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1138695 1138723 . + 0 ID=Thaps5410;Parent=Thaps5410;rank=5 chr5 ensembl protein_coding_gene 1139010 1140742 . - . ID=Thaps22725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2U8];external_name=Thaps22725;logic_name=jgi_thaps3 chr5 ensembl transcript 1139010 1140742 . - . ID=Thaps22725;Parent=Thaps22725;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1139010 1139992 . - 0 ID=Thaps22725;Parent=Thaps22725;rank=3 chr5 . exon 1139010 1139992 . - . ID=Thaps22725.3;Parent=Thaps22725;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1140099 1140191 . - 0 ID=Thaps22725;Parent=Thaps22725;rank=2 chr5 . exon 1140099 1140191 . - . ID=Thaps22725.2;Parent=Thaps22725;constitutive=1;rank=2 chr5 . CDS 1140268 1140742 . - 0 ID=Thaps22725;Parent=Thaps22725;rank=1 chr5 . exon 1140268 1140742 . - . ID=Thaps22725.1;Parent=Thaps22725;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1141070 1142272 . + . ID=Thaps22726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2U9];external_name=Thaps22726;logic_name=jgi_thaps3 chr5 ensembl transcript 1141070 1142272 . + . ID=Thaps22726;Parent=Thaps22726;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1141070 1142024 . + 0 ID=Thaps22726;Parent=Thaps22726;rank=1 chr5 . exon 1141070 1142024 . + . ID=Thaps22726.1;Parent=Thaps22726;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1142109 1142272 . + 0 ID=Thaps22726;Parent=Thaps22726;rank=2 chr5 . exon 1142109 1142272 . + . ID=Thaps22726.2;Parent=Thaps22726;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1143201 1147244 . + . ID=Thaps22727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2V0];external_name=Thaps22727;logic_name=jgi_thaps3 chr5 ensembl transcript 1143201 1147244 . + . ID=Thaps22727;Parent=Thaps22727;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1143201 1144704 . + 0 ID=Thaps22727;Parent=Thaps22727;rank=1 chr5 . exon 1143201 1144704 . + . ID=Thaps22727.1;Parent=Thaps22727;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1144791 1147166 . + 0 ID=Thaps22727;Parent=Thaps22727;rank=2 chr5 . exon 1144791 1147166 . + . ID=Thaps22727.2;Parent=Thaps22727;constitutive=1;rank=2 chr5 . CDS 1147219 1147244 . + 0 ID=Thaps22727;Parent=Thaps22727;rank=3 chr5 . exon 1147219 1147244 . + . ID=Thaps22727.3;Parent=Thaps22727;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . exon 1138695 1138723 . + . ID=Thaps5410.5;Parent=Thaps5410;constitutive=1;ensembl_end_phase=2;rank=5 chr5 ensembl protein_coding_gene 1147376 1149226 . - . ID=Thaps5414;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2V1];external_name=Thaps5414;logic_name=jgi_thaps3 chr5 ensembl transcript 1147376 1149226 . - . ID=Thaps5414;Parent=Thaps5414;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1147376 1149226 . - 0 ID=Thaps5414;Parent=Thaps5414;rank=1 chr5 . exon 1147376 1149226 . - . ID=Thaps5414.1;Parent=Thaps5414;constitutive=1;rank=1 chr5 . repeat_region 1152873 1152880 . ? . description=dust chr5 . repeat_region 1155670 1155696 . ? . description=trf chr5 . repeat_region 1157469 1157500 . ? . description=trf chr5 ensembl protein_coding_gene 1151452 1158222 . - . ID=Thaps22728;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2V3];external_name=Thaps22728;logic_name=jgi_thaps3 chr5 ensembl transcript 1151452 1158222 . - . ID=Thaps22728;Parent=Thaps22728;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1151452 1153044 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=10 chr5 . exon 1151452 1153044 . - . ID=Thaps22728.10;Parent=Thaps22728;constitutive=1;rank=10 chr5 . CDS 1153124 1153408 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=9 chr5 . exon 1153124 1153408 . - . ID=Thaps22728.9;Parent=Thaps22728;constitutive=1;rank=9 chr5 . CDS 1153476 1153802 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=8 chr5 . exon 1153476 1153802 . - . ID=Thaps22728.8;Parent=Thaps22728;constitutive=1;rank=8 chr5 . CDS 1153901 1154735 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=7 chr5 . exon 1153901 1154735 . - . ID=Thaps22728.7;Parent=Thaps22728;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 1154810 1155210 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=6 chr5 . exon 1154810 1155210 . - . ID=Thaps22728.6;Parent=Thaps22728;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 1155291 1155650 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=5 chr5 . exon 1155291 1155650 . - . ID=Thaps22728.5;Parent=Thaps22728;constitutive=1;rank=5 chr5 . CDS 1155734 1156658 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=4 chr5 . exon 1155734 1156658 . - . ID=Thaps22728.4;Parent=Thaps22728;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1156836 1157422 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=3 chr5 . exon 1156836 1157422 . - . ID=Thaps22728.3;Parent=Thaps22728;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1157578 1157978 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=2 chr5 . exon 1157578 1157978 . - . ID=Thaps22728.2;Parent=Thaps22728;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1158138 1158222 . - 0 ID=Thaps22728;Parent=Thaps22728;rank=1 chr5 ensembl protein_coding_gene 1149567 1151337 . + . ID=Thaps5415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2V2];external_name=Thaps5415;logic_name=jgi_thaps3 chr5 ensembl transcript 1149567 1151337 . + . ID=Thaps5415;Parent=Thaps5415;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1149567 1150551 . + 0 ID=Thaps5415;Parent=Thaps5415;rank=1 chr5 . exon 1149567 1150551 . + . ID=Thaps5415.1;Parent=Thaps5415;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1150643 1151337 . + 0 ID=Thaps5415;Parent=Thaps5415;rank=2 chr5 . exon 1150643 1151337 . + . ID=Thaps5415.2;Parent=Thaps5415;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 1158138 1158222 . - . ID=Thaps22728.1;Parent=Thaps22728;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1161732 1163918 . - . ID=Thaps262521;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2V5];external_name=Thaps262521;logic_name=jgi_thaps3 chr5 ensembl transcript 1161732 1163918 . - . ID=Thaps262521;Parent=Thaps262521;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1161732 1161860 . - 0 ID=Thaps262521;Parent=Thaps262521;rank=7 chr5 . exon 1161732 1161860 . - . ID=Thaps262521.7;Parent=Thaps262521;constitutive=1;rank=7 chr5 . CDS 1161891 1162121 . - 0 ID=Thaps262521;Parent=Thaps262521;rank=6 chr5 . exon 1161891 1162121 . - . ID=Thaps262521.6;Parent=Thaps262521;constitutive=1;rank=6 chr5 . CDS 1162158 1162283 . - 0 ID=Thaps262521;Parent=Thaps262521;rank=5 chr5 . exon 1162158 1162283 . - . ID=Thaps262521.5;Parent=Thaps262521;constitutive=1;rank=5 chr5 . CDS 1162326 1162703 . - 0 ID=Thaps262521;Parent=Thaps262521;rank=4 chr5 . exon 1162326 1162703 . - . ID=Thaps262521.4;Parent=Thaps262521;constitutive=1;rank=4 chr5 . CDS 1162755 1162937 . - 0 ID=Thaps262521;Parent=Thaps262521;rank=3 chr5 . exon 1162755 1162937 . - . ID=Thaps262521.3;Parent=Thaps262521;constitutive=1;rank=3 chr5 . CDS 1163058 1163344 . - 0 ID=Thaps262521;Parent=Thaps262521;rank=2 chr5 . exon 1163058 1163344 . - . ID=Thaps262521.2;Parent=Thaps262521;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1163630 1163918 . - 0 ID=Thaps262521;Parent=Thaps262521;rank=1 chr5 . exon 1163630 1163918 . - . ID=Thaps262521.1;Parent=Thaps262521;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1158727 1159339 . + . ID=Thaps28317;biotype=protein_coding;description=Probable dUTP pyrophosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8C2V4];external_name=Thaps28317;logic_name=jgi_thaps3 chr5 ensembl transcript 1158727 1159339 . + . ID=Thaps28317;Parent=Thaps28317;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1158727 1158941 . + 0 ID=Thaps28317;Parent=Thaps28317;rank=1 chr5 . exon 1158727 1158941 . + . ID=Thaps28317.1;Parent=Thaps28317;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1159066 1159339 . + 0 ID=Thaps28317;Parent=Thaps28317;rank=2 chr5 . exon 1159066 1159339 . + . ID=Thaps28317.2;Parent=Thaps28317;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1164375 1165610 . + . ID=Thaps5419;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2V6];external_name=Thaps5419;logic_name=jgi_thaps3 chr5 ensembl transcript 1164375 1165610 . + . ID=Thaps5419;Parent=Thaps5419;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1164375 1164513 . + 0 ID=Thaps5419;Parent=Thaps5419;rank=1 chr5 . exon 1164375 1164513 . + . ID=Thaps5419.1;Parent=Thaps5419;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1164637 1164771 . + 0 ID=Thaps5419;Parent=Thaps5419;rank=2 chr5 . exon 1164637 1164771 . + . ID=Thaps5419.2;Parent=Thaps5419;constitutive=1;rank=2 chr5 . CDS 1164858 1164963 . + 0 ID=Thaps5419;Parent=Thaps5419;rank=3 chr5 . exon 1164858 1164963 . + . ID=Thaps5419.3;Parent=Thaps5419;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1165055 1165166 . + 0 ID=Thaps5419;Parent=Thaps5419;rank=4 chr5 . exon 1165055 1165166 . + . ID=Thaps5419.4;Parent=Thaps5419;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1165242 1165610 . + 0 ID=Thaps5419;Parent=Thaps5419;rank=5 chr5 . exon 1165242 1165610 . + . ID=Thaps5419.5;Parent=Thaps5419;constitutive=1;rank=5 chr5 ensembl protein_coding_gene 1166021 1167505 . + . ID=Thaps5420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2V7];external_name=Thaps5420;logic_name=jgi_thaps3 chr5 ensembl transcript 1166021 1167505 . + . ID=Thaps5420;Parent=Thaps5420;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1166021 1167505 . + 0 ID=Thaps5420;Parent=Thaps5420;rank=1 chr5 . exon 1166021 1167505 . + . ID=Thaps5420.1;Parent=Thaps5420;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1167661 1169025 . + . ID=Thaps5421;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2V8];external_name=Thaps5421;logic_name=jgi_thaps3 chr5 ensembl transcript 1167661 1169025 . + . ID=Thaps5421;Parent=Thaps5421;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1167661 1169025 . + 0 ID=Thaps5421;Parent=Thaps5421;rank=1 chr5 . exon 1167661 1169025 . + . ID=Thaps5421.1;Parent=Thaps5421;constitutive=1;rank=1 chr5 . repeat_region 1168833 1168856 . ? . description=trf chr5 . repeat_region 1168833 1168856 . ? . description=dust chr5 . repeat_region 1173014 1173041 . ? . description=dust chr5 ensembl protein_coding_gene 1171269 1172639 . - . ID=Thaps22731;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W0];external_name=Thaps22731;logic_name=jgi_thaps3 chr5 ensembl transcript 1171269 1172639 . - . ID=Thaps22731;Parent=Thaps22731;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1171269 1172066 . - 0 ID=Thaps22731;Parent=Thaps22731;rank=2 chr5 . exon 1171269 1172066 . - . ID=Thaps22731.2;Parent=Thaps22731;constitutive=1;rank=2 chr5 . CDS 1172151 1172639 . - 0 ID=Thaps22731;Parent=Thaps22731;rank=1 chr5 . exon 1172151 1172639 . - . ID=Thaps22731.1;Parent=Thaps22731;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1176384 1177163 . - . ID=Thaps22733;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W3];external_name=Thaps22733;logic_name=jgi_thaps3 chr5 ensembl transcript 1176384 1177163 . - . ID=Thaps22733;Parent=Thaps22733;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1176384 1177163 . - 0 ID=Thaps22733;Parent=Thaps22733;rank=1 chr5 . exon 1176384 1177163 . - . ID=Thaps22733.1;Parent=Thaps22733;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1169160 1170678 . - . ID=Thaps268895;biotype=protein_coding;description=Silicic acid transporter%2C silicon transport [Source:UniProtKB/TrEMBL%3BAcc:B8C2V9];external_name=SIT;logic_name=jgi_thaps3 chr5 ensembl transcript 1169160 1170678 . - . ID=Thaps268895;Parent=Thaps268895;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1169160 1170491 . - 0 ID=Thaps268895;Parent=Thaps268895;rank=2 chr5 . exon 1169160 1170491 . - . ID=Thaps268895.2;Parent=Thaps268895;constitutive=1;rank=2 chr5 . CDS 1170616 1170678 . - 0 ID=Thaps268895;Parent=Thaps268895;rank=1 chr5 . exon 1170616 1170678 . - . ID=Thaps268895.1;Parent=Thaps268895;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1173117 1173992 . + . ID=Thaps5424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W1];external_name=Thaps5424;logic_name=jgi_thaps3 chr5 ensembl transcript 1173117 1173992 . + . ID=Thaps5424;Parent=Thaps5424;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1173117 1173992 . + 0 ID=Thaps5424;Parent=Thaps5424;rank=1 chr5 . exon 1173117 1173992 . + . ID=Thaps5424.1;Parent=Thaps5424;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1174268 1175227 . - . ID=Thaps5425;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W2];external_name=Thaps5425;logic_name=jgi_thaps3 chr5 ensembl transcript 1174268 1175227 . - . ID=Thaps5425;Parent=Thaps5425;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1174268 1175227 . - 0 ID=Thaps5425;Parent=Thaps5425;rank=1 chr5 . exon 1174268 1175227 . - . ID=Thaps5425.1;Parent=Thaps5425;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1177481 1178676 . + . ID=Thaps5428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W4];external_name=Thaps5428;logic_name=jgi_thaps3 chr5 ensembl transcript 1177481 1178676 . + . ID=Thaps5428;Parent=Thaps5428;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1177481 1177690 . + 0 ID=Thaps5428;Parent=Thaps5428;rank=1 chr5 . exon 1177481 1177690 . + . ID=Thaps5428.1;Parent=Thaps5428;constitutive=1;rank=1 chr5 . CDS 1177787 1178338 . + 0 ID=Thaps5428;Parent=Thaps5428;rank=2 chr5 . exon 1177787 1178338 . + . ID=Thaps5428.2;Parent=Thaps5428;constitutive=1;rank=2 chr5 . CDS 1178590 1178676 . + 0 ID=Thaps5428;Parent=Thaps5428;rank=3 chr5 ensembl protein_coding_gene 1179718 1181282 . + . ID=Thaps22734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W5];external_name=Thaps22734;logic_name=jgi_thaps3 chr5 ensembl transcript 1179718 1181282 . + . ID=Thaps22734;Parent=Thaps22734;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1179718 1180195 . + 0 ID=Thaps22734;Parent=Thaps22734;rank=1 chr5 . exon 1179718 1180195 . + . ID=Thaps22734.1;Parent=Thaps22734;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1180286 1181162 . + 0 ID=Thaps22734;Parent=Thaps22734;rank=2 chr5 . exon 1180286 1181162 . + . ID=Thaps22734.2;Parent=Thaps22734;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1181195 1181282 . + 0 ID=Thaps22734;Parent=Thaps22734;rank=3 chr5 . exon 1181195 1181282 . + . ID=Thaps22734.3;Parent=Thaps22734;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 1181695 1182663 . - . ID=Thaps22735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W6];external_name=Thaps22735;logic_name=jgi_thaps3 chr5 ensembl transcript 1181695 1182663 . - . ID=Thaps22735;Parent=Thaps22735;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1181695 1182663 . - 0 ID=Thaps22735;Parent=Thaps22735;rank=1 chr5 . exon 1181695 1182663 . - . ID=Thaps22735.1;Parent=Thaps22735;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1187328 1187981 . - . ID=Thaps34265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W8];external_name=Thaps34265;logic_name=jgi_thaps3 chr5 ensembl transcript 1187328 1187981 . - . ID=Thaps34265;Parent=Thaps34265;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1187328 1187381 . - 0 ID=Thaps34265;Parent=Thaps34265;rank=4 chr5 . exon 1187328 1187381 . - . ID=Thaps34265.4;Parent=Thaps34265;constitutive=1;rank=4 chr5 . CDS 1187487 1187581 . - 0 ID=Thaps34265;Parent=Thaps34265;rank=3 chr5 . exon 1187487 1187581 . - . ID=Thaps34265.3;Parent=Thaps34265;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1187680 1187796 . - 0 ID=Thaps34265;Parent=Thaps34265;rank=2 chr5 . exon 1187680 1187796 . - . ID=Thaps34265.2;Parent=Thaps34265;constitutive=1;rank=2 chr5 . CDS 1187909 1187981 . - 0 ID=Thaps34265;Parent=Thaps34265;rank=1 chr5 . exon 1187909 1187981 . - . ID=Thaps34265.1;Parent=Thaps34265;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . exon 1178590 1178676 . + . ID=Thaps5428.3;Parent=Thaps5428;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 1183417 1186981 . + . ID=Thaps5431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W7];external_name=Thaps5431;logic_name=jgi_thaps3 chr5 ensembl transcript 1183417 1186981 . + . ID=Thaps5431;Parent=Thaps5431;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1183417 1184731 . + 0 ID=Thaps5431;Parent=Thaps5431;rank=1 chr5 . exon 1183417 1184731 . + . ID=Thaps5431.1;Parent=Thaps5431;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1184826 1186981 . + 0 ID=Thaps5431;Parent=Thaps5431;rank=2 chr5 . exon 1184826 1186981 . + . ID=Thaps5431.2;Parent=Thaps5431;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1197203 1198343 . + . ID=Thaps262525;biotype=protein_coding;description=Proteasome subunit beta type [Source:UniProtKB/TrEMBL%3BAcc:B8C2X1];external_name=PSB5;logic_name=jgi_thaps3 chr5 ensembl transcript 1197203 1198343 . + . ID=Thaps262525;Parent=Thaps262525;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1197203 1197383 . + 0 ID=Thaps262525;Parent=Thaps262525;rank=1 chr5 . exon 1197203 1197383 . + . ID=Thaps262525.1;Parent=Thaps262525;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1197599 1197773 . + 0 ID=Thaps262525;Parent=Thaps262525;rank=2 chr5 . exon 1197599 1197773 . + . ID=Thaps262525.2;Parent=Thaps262525;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1197869 1198343 . + 0 ID=Thaps262525;Parent=Thaps262525;rank=3 chr5 . exon 1197869 1198343 . + . ID=Thaps262525.3;Parent=Thaps262525;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 1193760 1194648 . + . ID=Thaps268896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2W9];external_name=Thaps268896;logic_name=jgi_thaps3 chr5 ensembl transcript 1193760 1194648 . + . ID=Thaps268896;Parent=Thaps268896;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1193760 1193838 . + 0 ID=Thaps268896;Parent=Thaps268896;rank=1 chr5 . exon 1193760 1193838 . + . ID=Thaps268896.1;Parent=Thaps268896;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1193915 1194230 . + 0 ID=Thaps268896;Parent=Thaps268896;rank=2 chr5 . exon 1193915 1194230 . + . ID=Thaps268896.2;Parent=Thaps268896;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1194324 1194648 . + 0 ID=Thaps268896;Parent=Thaps268896;rank=3 chr5 . exon 1194324 1194648 . + . ID=Thaps268896.3;Parent=Thaps268896;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 1194889 1195302 . + . ID=Thaps5434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2X0];external_name=Thaps5434;logic_name=jgi_thaps3 chr5 ensembl transcript 1194889 1195302 . + . ID=Thaps5434;Parent=Thaps5434;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1194889 1195302 . + 0 ID=Thaps5434;Parent=Thaps5434;rank=1 chr5 . exon 1194889 1195302 . + . ID=Thaps5434.1;Parent=Thaps5434;constitutive=1;rank=1 chr5 . repeat_region 1204246 1204306 . ? . description=trf chr5 ensembl protein_coding_gene 1199957 1202064 . + . ID=Thaps262526;biotype=protein_coding;description=Member of mcm2/3/5 protein family [Source:UniProtKB/TrEMBL%3BAcc:B8C2X2];external_name=Thaps262526;logic_name=jgi_thaps3 chr5 ensembl transcript 1199957 1202064 . + . ID=Thaps262526;Parent=Thaps262526;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1199957 1200017 . + 0 ID=Thaps262526;Parent=Thaps262526;rank=1 chr5 . exon 1199957 1200017 . + . ID=Thaps262526.1;Parent=Thaps262526;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1200093 1200633 . + 0 ID=Thaps262526;Parent=Thaps262526;rank=2 chr5 . exon 1200093 1200633 . + . ID=Thaps262526.2;Parent=Thaps262526;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1200655 1201077 . + 0 ID=Thaps262526;Parent=Thaps262526;rank=3 chr5 . exon 1200655 1201077 . + . ID=Thaps262526.3;Parent=Thaps262526;constitutive=1;rank=3 chr5 . CDS 1201151 1201460 . + 0 ID=Thaps262526;Parent=Thaps262526;rank=4 chr5 . exon 1201151 1201460 . + . ID=Thaps262526.4;Parent=Thaps262526;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1201536 1201875 . + 0 ID=Thaps262526;Parent=Thaps262526;rank=5 chr5 . exon 1201536 1201875 . + . ID=Thaps262526.5;Parent=Thaps262526;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1201906 1202064 . + 0 ID=Thaps262526;Parent=Thaps262526;rank=6 chr5 . exon 1201906 1202064 . + . ID=Thaps262526.6;Parent=Thaps262526;constitutive=1;rank=6 chr5 ensembl protein_coding_gene 1206114 1209104 . + . ID=Thaps262527;biotype=protein_coding;description=Pi 4-kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C2X4];external_name=Thaps262527;logic_name=jgi_thaps3 chr5 ensembl transcript 1206114 1209104 . + . ID=Thaps262527;Parent=Thaps262527;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1206114 1206362 . + 0 ID=Thaps262527;Parent=Thaps262527;rank=1 chr5 . exon 1206114 1206362 . + . ID=Thaps262527.1;Parent=Thaps262527;constitutive=1;rank=1 chr5 . CDS 1208092 1209104 . + 0 ID=Thaps262527;Parent=Thaps262527;rank=2 chr5 ensembl protein_coding_gene 1202284 1204388 . - . ID=Thaps5439;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2X3];external_name=Thaps5439;logic_name=jgi_thaps3 chr5 ensembl transcript 1202284 1204388 . - . ID=Thaps5439;Parent=Thaps5439;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1202284 1202818 . - 0 ID=Thaps5439;Parent=Thaps5439;rank=2 chr5 . exon 1202284 1202818 . - . ID=Thaps5439.2;Parent=Thaps5439;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1202974 1204388 . - 0 ID=Thaps5439;Parent=Thaps5439;rank=1 chr5 . exon 1202974 1204388 . - . ID=Thaps5439.1;Parent=Thaps5439;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1215037 1216743 . - . ID=Thaps22739;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2X7];external_name=Thaps22739;logic_name=jgi_thaps3 chr5 ensembl transcript 1215037 1216743 . - . ID=Thaps22739;Parent=Thaps22739;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1215037 1216743 . - 0 ID=Thaps22739;Parent=Thaps22739;rank=1 chr5 . exon 1215037 1216743 . - . ID=Thaps22739.1;Parent=Thaps22739;constitutive=1;rank=1 chr5 . exon 1208092 1209104 . + . ID=Thaps262527.2;Parent=Thaps262527;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1210252 1211127 . + . ID=Thaps262528;biotype=protein_coding;description=Phosphatidylinositol 4-kinase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2X5];external_name=Thaps262528;logic_name=jgi_thaps3 chr5 ensembl transcript 1210252 1211127 . + . ID=Thaps262528;Parent=Thaps262528;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1210252 1211127 . + 0 ID=Thaps262528;Parent=Thaps262528;rank=1 chr5 . exon 1210252 1211127 . + . ID=Thaps262528.1;Parent=Thaps262528;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1212084 1212545 . + . ID=Thaps262529;biotype=protein_coding;description=Pi 4-kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C2X6];external_name=Thaps262529;logic_name=jgi_thaps3 chr5 ensembl transcript 1212084 1212545 . + . ID=Thaps262529;Parent=Thaps262529;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1212084 1212173 . + 0 ID=Thaps262529;Parent=Thaps262529;rank=1 chr5 . exon 1212084 1212173 . + . ID=Thaps262529.1;Parent=Thaps262529;constitutive=1;rank=1 chr5 . CDS 1212318 1212545 . + 0 ID=Thaps262529;Parent=Thaps262529;rank=2 chr5 . exon 1212318 1212545 . + . ID=Thaps262529.2;Parent=Thaps262529;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1217959 1219450 . - . ID=Thaps22741;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2X8];external_name=Thaps22741;logic_name=jgi_thaps3 chr5 ensembl transcript 1217959 1219450 . - . ID=Thaps22741;Parent=Thaps22741;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1217959 1218560 . - 0 ID=Thaps22741;Parent=Thaps22741;rank=2 chr5 . exon 1217959 1218560 . - . ID=Thaps22741.2;Parent=Thaps22741;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1218649 1219450 . - 0 ID=Thaps22741;Parent=Thaps22741;rank=1 chr5 . exon 1218649 1219450 . - . ID=Thaps22741.1;Parent=Thaps22741;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1219929 1222252 . + . ID=Thaps22742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2X9];external_name=Thaps22742;logic_name=jgi_thaps3 chr5 ensembl transcript 1219929 1222252 . + . ID=Thaps22742;Parent=Thaps22742;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1219929 1219955 . + 0 ID=Thaps22742;Parent=Thaps22742;rank=1 chr5 . exon 1219929 1219955 . + . ID=Thaps22742.1;Parent=Thaps22742;constitutive=1;rank=1 chr5 . CDS 1220051 1220205 . + 0 ID=Thaps22742;Parent=Thaps22742;rank=2 chr5 . exon 1220051 1220205 . + . ID=Thaps22742.2;Parent=Thaps22742;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1220365 1220951 . + 0 ID=Thaps22742;Parent=Thaps22742;rank=3 chr5 . exon 1220365 1220951 . + . ID=Thaps22742.3;Parent=Thaps22742;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1221030 1222252 . + 0 ID=Thaps22742;Parent=Thaps22742;rank=4 chr5 . exon 1221030 1222252 . + . ID=Thaps22742.4;Parent=Thaps22742;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 1224749 1225864 . + . ID=Thaps22744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y1];external_name=Thaps22744;logic_name=jgi_thaps3 chr5 ensembl transcript 1224749 1225864 . + . ID=Thaps22744;Parent=Thaps22744;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1224749 1225037 . + 0 ID=Thaps22744;Parent=Thaps22744;rank=1 chr5 . exon 1224749 1225037 . + . ID=Thaps22744.1;Parent=Thaps22744;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1225074 1225864 . + 0 ID=Thaps22744;Parent=Thaps22744;rank=2 chr5 . exon 1225074 1225864 . + . ID=Thaps22744.2;Parent=Thaps22744;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1226639 1227049 . + . ID=Thaps26250;biotype=protein_coding;description=RL26%2C ribosomal protein 26 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y2];external_name=RL26;logic_name=jgi_thaps3 chr5 ensembl transcript 1226639 1227049 . + . ID=Thaps26250;Parent=Thaps26250;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1226639 1227049 . + 0 ID=Thaps26250;Parent=Thaps26250;rank=1 chr5 . exon 1226639 1227049 . + . ID=Thaps26250.1;Parent=Thaps26250;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1222566 1223036 . - . ID=Thaps262530;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y0];external_name=Thaps262530;logic_name=jgi_thaps3 chr5 ensembl transcript 1222566 1223036 . - . ID=Thaps262530;Parent=Thaps262530;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1222566 1222735 . - 0 ID=Thaps262530;Parent=Thaps262530;rank=3 chr5 . exon 1222566 1222735 . - . ID=Thaps262530.3;Parent=Thaps262530;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1222822 1222863 . - 0 ID=Thaps262530;Parent=Thaps262530;rank=2 chr5 . exon 1222822 1222863 . - . ID=Thaps262530.2;Parent=Thaps262530;constitutive=1;rank=2 chr5 . CDS 1222955 1223036 . - 0 ID=Thaps262530;Parent=Thaps262530;rank=1 chr5 . exon 1222955 1223036 . - . ID=Thaps262530.1;Parent=Thaps262530;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1227477 1228738 . - . ID=Thaps28326;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y3];external_name=Thaps28326;logic_name=jgi_thaps3 chr5 ensembl transcript 1227477 1228738 . - . ID=Thaps28326;Parent=Thaps28326;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1227477 1227836 . - 0 ID=Thaps28326;Parent=Thaps28326;rank=2 chr5 . exon 1227477 1227836 . - . ID=Thaps28326.2;Parent=Thaps28326;constitutive=1;rank=2 chr5 . CDS 1227950 1228738 . - 0 ID=Thaps28326;Parent=Thaps28326;rank=1 chr5 ensembl protein_coding_gene 1231074 1231664 . - . ID=Thaps22748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y5];external_name=Thaps22748;logic_name=jgi_thaps3 chr5 ensembl transcript 1231074 1231664 . - . ID=Thaps22748;Parent=Thaps22748;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1231074 1231664 . - 0 ID=Thaps22748;Parent=Thaps22748;rank=1 chr5 . exon 1231074 1231664 . - . ID=Thaps22748.1;Parent=Thaps22748;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1234114 1236209 . - . ID=Thaps22749;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y7];external_name=Thaps22749;logic_name=jgi_thaps3 chr5 ensembl transcript 1234114 1236209 . - . ID=Thaps22749;Parent=Thaps22749;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1234114 1234988 . - 0 ID=Thaps22749;Parent=Thaps22749;rank=3 chr5 . exon 1234114 1234988 . - . ID=Thaps22749.3;Parent=Thaps22749;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1235063 1236016 . - 0 ID=Thaps22749;Parent=Thaps22749;rank=2 chr5 . exon 1235063 1236016 . - . ID=Thaps22749.2;Parent=Thaps22749;constitutive=1;rank=2 chr5 . CDS 1236068 1236209 . - 0 ID=Thaps22749;Parent=Thaps22749;rank=1 chr5 . exon 1236068 1236209 . - . ID=Thaps22749.1;Parent=Thaps22749;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1237052 1240132 . + . ID=Thaps22750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y8];external_name=Thaps22750;logic_name=jgi_thaps3 chr5 ensembl transcript 1237052 1240132 . + . ID=Thaps22750;Parent=Thaps22750;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1237052 1240132 . + 0 ID=Thaps22750;Parent=Thaps22750;rank=1 chr5 . exon 1237052 1240132 . + . ID=Thaps22750.1;Parent=Thaps22750;constitutive=1;rank=1 chr5 . exon 1227950 1228738 . - . ID=Thaps28326.1;Parent=Thaps28326;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1229764 1230210 . + . ID=Thaps40747;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c light-harvesting protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y4];external_name=LHCR10;logic_name=jgi_thaps3 chr5 ensembl transcript 1229764 1230210 . + . ID=Thaps40747;Parent=Thaps40747;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1229764 1230210 . + 0 ID=Thaps40747;Parent=Thaps40747;rank=1 chr5 . exon 1229764 1230210 . + . ID=Thaps40747.1;Parent=Thaps40747;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1232240 1234067 . + . ID=Thaps5452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y6];external_name=Thaps5452;logic_name=jgi_thaps3 chr5 ensembl transcript 1232240 1234067 . + . ID=Thaps5452;Parent=Thaps5452;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1232240 1232753 . + 0 ID=Thaps5452;Parent=Thaps5452;rank=1 chr5 . exon 1232240 1232753 . + . ID=Thaps5452.1;Parent=Thaps5452;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1232917 1234067 . + 0 ID=Thaps5452;Parent=Thaps5452;rank=2 chr5 . exon 1232917 1234067 . + . ID=Thaps5452.2;Parent=Thaps5452;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . repeat_region 1244696 1244737 . ? . description=trf chr5 . biological_region 1247297 1247300 0.999 - . logic_name=eponine chr5 ensembl protein_coding_gene 1244537 1247239 . - . ID=Thaps22752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z1];external_name=Thaps22752;logic_name=jgi_thaps3 chr5 ensembl transcript 1244537 1247239 . - . ID=Thaps22752;Parent=Thaps22752;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1244537 1247239 . - 0 ID=Thaps22752;Parent=Thaps22752;rank=1 chr5 . exon 1244537 1247239 . - . ID=Thaps22752.1;Parent=Thaps22752;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1241991 1242812 . - . ID=Thaps5456;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Y9];external_name=Thaps5456;logic_name=jgi_thaps3 chr5 ensembl transcript 1241991 1242812 . - . ID=Thaps5456;Parent=Thaps5456;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1241991 1242812 . - 0 ID=Thaps5456;Parent=Thaps5456;rank=1 chr5 . exon 1241991 1242812 . - . ID=Thaps5456.1;Parent=Thaps5456;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1243062 1244462 . + . ID=Thaps5457;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z0];external_name=Thaps5457;logic_name=jgi_thaps3 chr5 ensembl transcript 1243062 1244462 . + . ID=Thaps5457;Parent=Thaps5457;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1243062 1244357 . + 0 ID=Thaps5457;Parent=Thaps5457;rank=1 chr5 . exon 1243062 1244357 . + . ID=Thaps5457.1;Parent=Thaps5457;constitutive=1;rank=1 chr5 . CDS 1244427 1244462 . + 0 ID=Thaps5457;Parent=Thaps5457;rank=2 chr5 . exon 1244427 1244462 . + . ID=Thaps5457.2;Parent=Thaps5457;constitutive=1;rank=2 chr5 . repeat_region 1254517 1254524 . ? . description=dust chr5 ensembl protein_coding_gene 1247989 1253033 . + . ID=Thaps22753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z2];external_name=Thaps22753;logic_name=jgi_thaps3 chr5 ensembl transcript 1247989 1253033 . + . ID=Thaps22753;Parent=Thaps22753;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1247989 1248471 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=1 chr5 . exon 1247989 1248471 . + . ID=Thaps22753.1;Parent=Thaps22753;constitutive=1;rank=1 chr5 . CDS 1248574 1250511 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=2 chr5 . exon 1248574 1250511 . + . ID=Thaps22753.2;Parent=Thaps22753;constitutive=1;rank=2 chr5 . CDS 1250597 1251568 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=3 chr5 . exon 1250597 1251568 . + . ID=Thaps22753.3;Parent=Thaps22753;constitutive=1;rank=3 chr5 . CDS 1251611 1251744 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=4 chr5 . exon 1251611 1251744 . + . ID=Thaps22753.4;Parent=Thaps22753;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1251828 1252100 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=5 chr5 . exon 1251828 1252100 . + . ID=Thaps22753.5;Parent=Thaps22753;constitutive=1;rank=5 chr5 . CDS 1252183 1252216 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=6 chr5 . exon 1252183 1252216 . + . ID=Thaps22753.6;Parent=Thaps22753;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 1252296 1252401 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=7 chr5 . exon 1252296 1252401 . + . ID=Thaps22753.7;Parent=Thaps22753;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 1252479 1252590 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=8 chr5 . exon 1252479 1252590 . + . ID=Thaps22753.8;Parent=Thaps22753;constitutive=1;ensembl_end_phase=1;rank=8 chr5 . CDS 1252674 1252816 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=9 chr5 . exon 1252674 1252816 . + . ID=Thaps22753.9;Parent=Thaps22753;constitutive=1;ensembl_end_phase=2;rank=9 chr5 . CDS 1252921 1253033 . + 0 ID=Thaps22753;Parent=Thaps22753;rank=10 chr5 . exon 1252921 1253033 . + . ID=Thaps22753.10;Parent=Thaps22753;constitutive=1;ensembl_end_phase=2;rank=10 chr5 ensembl protein_coding_gene 1256828 1259758 . + . ID=Thaps262535;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z4];external_name=Thaps262535;logic_name=jgi_thaps3 chr5 ensembl transcript 1256828 1259758 . + . ID=Thaps262535;Parent=Thaps262535;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1256828 1259040 . + 0 ID=Thaps262535;Parent=Thaps262535;rank=1 chr5 . exon 1256828 1259040 . + . ID=Thaps262535.1;Parent=Thaps262535;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1259203 1259758 . + 0 ID=Thaps262535;Parent=Thaps262535;rank=2 chr5 ensembl protein_coding_gene 1253207 1255410 . - . ID=Thaps268902;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z3];external_name=Thaps268902;logic_name=jgi_thaps3 chr5 ensembl transcript 1253207 1255410 . - . ID=Thaps268902;Parent=Thaps268902;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1253207 1253602 . - 0 ID=Thaps268902;Parent=Thaps268902;rank=4 chr5 . exon 1253207 1253602 . - . ID=Thaps268902.4;Parent=Thaps268902;constitutive=1;rank=4 chr5 . CDS 1253738 1253788 . - 0 ID=Thaps268902;Parent=Thaps268902;rank=3 chr5 . exon 1253738 1253788 . - . ID=Thaps268902.3;Parent=Thaps268902;constitutive=1;rank=3 chr5 . CDS 1254062 1254723 . - 0 ID=Thaps268902;Parent=Thaps268902;rank=2 chr5 . exon 1254062 1254723 . - . ID=Thaps268902.2;Parent=Thaps268902;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1254870 1255410 . - 0 ID=Thaps268902;Parent=Thaps268902;rank=1 chr5 . exon 1254870 1255410 . - . ID=Thaps268902.1;Parent=Thaps268902;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 1261669 1261707 . ? . description=trf chr5 . repeat_region 1262535 1262557 . ? . description=trf chr5 ensembl protein_coding_gene 1266868 1276503 . - . ID=Thaps22757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z7];external_name=Thaps22757;logic_name=jgi_thaps3 chr5 ensembl transcript 1266868 1276503 . - . ID=Thaps22757;Parent=Thaps22757;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1266868 1268910 . - 0 ID=Thaps22757;Parent=Thaps22757;rank=5 chr5 . exon 1266868 1268910 . - . ID=Thaps22757.5;Parent=Thaps22757;constitutive=1;rank=5 chr5 . CDS 1269002 1269165 . - 0 ID=Thaps22757;Parent=Thaps22757;rank=4 chr5 . CDS 1269245 1272079 . - 0 ID=Thaps22757;Parent=Thaps22757;rank=3 chr5 . CDS 1272163 1276004 . - 0 ID=Thaps22757;Parent=Thaps22757;rank=2 chr5 . CDS 1276175 1276503 . - 0 ID=Thaps22757;Parent=Thaps22757;rank=1 chr5 . exon 1259203 1259758 . + . ID=Thaps262535.2;Parent=Thaps262535;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1263170 1266262 . + . ID=Thaps262537;biotype=protein_coding;description=Selenocysteine-specific elongation factor SelB [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z6];external_name=SELB;logic_name=jgi_thaps3 chr5 ensembl transcript 1263170 1266262 . + . ID=Thaps262537;Parent=Thaps262537;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1263170 1263362 . + 0 ID=Thaps262537;Parent=Thaps262537;rank=1 chr5 . exon 1263170 1263362 . + . ID=Thaps262537.1;Parent=Thaps262537;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1263489 1263875 . + 0 ID=Thaps262537;Parent=Thaps262537;rank=2 chr5 . exon 1263489 1263875 . + . ID=Thaps262537.2;Parent=Thaps262537;constitutive=1;rank=2 chr5 . CDS 1263936 1264412 . + 0 ID=Thaps262537;Parent=Thaps262537;rank=3 chr5 . exon 1263936 1264412 . + . ID=Thaps262537.3;Parent=Thaps262537;constitutive=1;rank=3 chr5 . CDS 1264500 1264807 . + 0 ID=Thaps262537;Parent=Thaps262537;rank=4 chr5 . exon 1264500 1264807 . + . ID=Thaps262537.4;Parent=Thaps262537;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1264899 1265633 . + 0 ID=Thaps262537;Parent=Thaps262537;rank=5 chr5 . exon 1264899 1265633 . + . ID=Thaps262537.5;Parent=Thaps262537;constitutive=1;rank=5 chr5 . CDS 1265920 1266262 . + 0 ID=Thaps262537;Parent=Thaps262537;rank=6 chr5 . exon 1265920 1266262 . + . ID=Thaps262537.6;Parent=Thaps262537;constitutive=1;ensembl_end_phase=1;rank=6 chr5 ensembl protein_coding_gene 1259818 1260864 . - . ID=Thaps268904;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z5];external_name=Thaps268904;logic_name=jgi_thaps3 chr5 ensembl transcript 1259818 1260864 . - . ID=Thaps268904;Parent=Thaps268904;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1259818 1260464 . - 0 ID=Thaps268904;Parent=Thaps268904;rank=2 chr5 . exon 1259818 1260464 . - . ID=Thaps268904.2;Parent=Thaps268904;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1260576 1260864 . - 0 ID=Thaps268904;Parent=Thaps268904;rank=1 chr5 . exon 1260576 1260864 . - . ID=Thaps268904.1;Parent=Thaps268904;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 1275452 1275512 . ? . description=dust chr5 . exon 1269002 1269165 . - . ID=Thaps22757.4;Parent=Thaps22757;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . exon 1269245 1272079 . - . ID=Thaps22757.3;Parent=Thaps22757;constitutive=1;rank=3 chr5 . exon 1272163 1276004 . - . ID=Thaps22757.2;Parent=Thaps22757;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 1276175 1276503 . - . ID=Thaps22757.1;Parent=Thaps22757;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1277337 1279355 . - . ID=Thaps22758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z8];external_name=Thaps22758;logic_name=jgi_thaps3 chr5 ensembl transcript 1277337 1279355 . - . ID=Thaps22758;Parent=Thaps22758;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1277337 1277386 . - 0 ID=Thaps22758;Parent=Thaps22758;rank=3 chr5 . exon 1277337 1277386 . - . ID=Thaps22758.3;Parent=Thaps22758;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1277481 1277941 . - 0 ID=Thaps22758;Parent=Thaps22758;rank=2 chr5 . exon 1277481 1277941 . - . ID=Thaps22758.2;Parent=Thaps22758;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1278022 1279355 . - 0 ID=Thaps22758;Parent=Thaps22758;rank=1 chr5 . exon 1278022 1279355 . - . ID=Thaps22758.1;Parent=Thaps22758;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1295182 1295419 . - . ID=Thaps262538;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C2Z9];external_name=Thaps262538;logic_name=jgi_thaps3 chr5 ensembl transcript 1295182 1295419 . - . ID=Thaps262538;Parent=Thaps262538;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1295182 1295419 . - 0 ID=Thaps262538;Parent=Thaps262538;rank=1 chr5 . exon 1295182 1295419 . - . ID=Thaps262538.1;Parent=Thaps262538;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 1307157 1307211 . ? . description=trf chr5 ensembl protein_coding_gene 1300901 1302583 . + . ID=Thaps262540;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C301];external_name=Thaps262540;logic_name=jgi_thaps3 chr5 ensembl transcript 1300901 1302583 . + . ID=Thaps262540;Parent=Thaps262540;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1300901 1301598 . + 0 ID=Thaps262540;Parent=Thaps262540;rank=1 chr5 . exon 1300901 1301598 . + . ID=Thaps262540.1;Parent=Thaps262540;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1301642 1301693 . + 0 ID=Thaps262540;Parent=Thaps262540;rank=2 chr5 . exon 1301642 1301693 . + . ID=Thaps262540.2;Parent=Thaps262540;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1301857 1301868 . + 0 ID=Thaps262540;Parent=Thaps262540;rank=3 chr5 . exon 1301857 1301868 . + . ID=Thaps262540.3;Parent=Thaps262540;constitutive=1;rank=3 chr5 . CDS 1302041 1302139 . + 0 ID=Thaps262540;Parent=Thaps262540;rank=4 chr5 . exon 1302041 1302139 . + . ID=Thaps262540.4;Parent=Thaps262540;constitutive=1;rank=4 chr5 . CDS 1302203 1302288 . + 0 ID=Thaps262540;Parent=Thaps262540;rank=5 chr5 . exon 1302203 1302288 . + . ID=Thaps262540.5;Parent=Thaps262540;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 1302313 1302583 . + 0 ID=Thaps262540;Parent=Thaps262540;rank=6 chr5 . exon 1302313 1302583 . + . ID=Thaps262540.6;Parent=Thaps262540;constitutive=1;ensembl_end_phase=1;rank=6 chr5 ensembl protein_coding_gene 1298250 1300394 . - . ID=Thaps28330;biotype=protein_coding;description=Probable bifunctional purine synthesis protein [Source:UniProtKB/TrEMBL%3BAcc:B8C300];external_name=Thaps28330;logic_name=jgi_thaps3 chr5 ensembl transcript 1298250 1300394 . - . ID=Thaps28330;Parent=Thaps28330;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1298250 1299105 . - 0 ID=Thaps28330;Parent=Thaps28330;rank=4 chr5 . exon 1298250 1299105 . - . ID=Thaps28330.4;Parent=Thaps28330;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1299187 1299496 . - 0 ID=Thaps28330;Parent=Thaps28330;rank=3 chr5 . exon 1299187 1299496 . - . ID=Thaps28330.3;Parent=Thaps28330;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1299613 1300269 . - 0 ID=Thaps28330;Parent=Thaps28330;rank=2 chr5 . exon 1299613 1300269 . - . ID=Thaps28330.2;Parent=Thaps28330;constitutive=1;rank=2 chr5 . CDS 1300367 1300394 . - 0 ID=Thaps28330;Parent=Thaps28330;rank=1 chr5 . exon 1300367 1300394 . - . ID=Thaps28330.1;Parent=Thaps28330;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1304438 1305723 . + . ID=Thaps28334;biotype=protein_coding;description=Glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C303];external_name=GAPD4;logic_name=jgi_thaps3 chr5 ensembl transcript 1304438 1305723 . + . ID=Thaps28334;Parent=Thaps28334;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1304438 1304782 . + 0 ID=Thaps28334;Parent=Thaps28334;rank=1 chr5 . exon 1304438 1304782 . + . ID=Thaps28334.1;Parent=Thaps28334;constitutive=1;rank=1 chr5 . CDS 1304907 1305184 . + 0 ID=Thaps28334;Parent=Thaps28334;rank=2 chr5 . exon 1304907 1305184 . + . ID=Thaps28334.2;Parent=Thaps28334;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1305312 1305723 . + 0 ID=Thaps28334;Parent=Thaps28334;rank=3 chr5 . exon 1305312 1305723 . + . ID=Thaps28334.3;Parent=Thaps28334;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 1307236 1307720 . + . ID=Thaps34104;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C305];external_name=Thaps34104;logic_name=jgi_thaps3 chr5 ensembl transcript 1307236 1307720 . + . ID=Thaps34104;Parent=Thaps34104;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1307236 1307460 . + 0 ID=Thaps34104;Parent=Thaps34104;rank=1 chr5 . exon 1307236 1307460 . + . ID=Thaps34104.1;Parent=Thaps34104;constitutive=1;rank=1 chr5 . CDS 1307574 1307720 . + 0 ID=Thaps34104;Parent=Thaps34104;rank=2 chr5 . exon 1307574 1307720 . + . ID=Thaps34104.2;Parent=Thaps34104;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1306288 1306629 . - . ID=Thaps34554;biotype=protein_coding;description=Photosystem II reaction center psb28 protein [Source:UniProtKB/TrEMBL%3BAcc:B8C304];external_name=PSBW;logic_name=jgi_thaps3 chr5 ensembl transcript 1306288 1306629 . - . ID=Thaps34554;Parent=Thaps34554;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1306288 1306629 . - 0 ID=Thaps34554;Parent=Thaps34554;rank=1 chr5 . exon 1306288 1306629 . - . ID=Thaps34554.1;Parent=Thaps34554;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1302943 1304129 . - . ID=Thaps5470;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C302];external_name=Thaps5470;logic_name=jgi_thaps3 chr5 ensembl transcript 1302943 1304129 . - . ID=Thaps5470;Parent=Thaps5470;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1302943 1303644 . - 0 ID=Thaps5470;Parent=Thaps5470;rank=2 chr5 . exon 1302943 1303644 . - . ID=Thaps5470.2;Parent=Thaps5470;constitutive=1;rank=2 chr5 . CDS 1303722 1304129 . - 0 ID=Thaps5470;Parent=Thaps5470;rank=1 chr5 . exon 1303722 1304129 . - . ID=Thaps5470.1;Parent=Thaps5470;constitutive=1;rank=1 chr5 . repeat_region 1313161 1313211 . ? . description=dust chr5 ensembl protein_coding_gene 1308418 1310898 . + . ID=Thaps22763;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C306];external_name=Thaps22763;logic_name=jgi_thaps3 chr5 ensembl transcript 1308418 1310898 . + . ID=Thaps22763;Parent=Thaps22763;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1308418 1310898 . + 0 ID=Thaps22763;Parent=Thaps22763;rank=1 chr5 . exon 1308418 1310898 . + . ID=Thaps22763.1;Parent=Thaps22763;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1313015 1317160 . + . ID=Thaps22764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C308];external_name=Thaps22764;logic_name=jgi_thaps3 chr5 ensembl transcript 1313015 1317160 . + . ID=Thaps22764;Parent=Thaps22764;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1313015 1317160 . + 0 ID=Thaps22764;Parent=Thaps22764;rank=1 chr5 . exon 1313015 1317160 . + . ID=Thaps22764.1;Parent=Thaps22764;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1311219 1312676 . - . ID=Thaps34441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C307];external_name=Thaps34441;logic_name=jgi_thaps3 chr5 ensembl transcript 1311219 1312676 . - . ID=Thaps34441;Parent=Thaps34441;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1311219 1312225 . - 0 ID=Thaps34441;Parent=Thaps34441;rank=2 chr5 . exon 1311219 1312225 . - . ID=Thaps34441.2;Parent=Thaps34441;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1312304 1312676 . - 0 ID=Thaps34441;Parent=Thaps34441;rank=1 chr5 . exon 1312304 1312676 . - . ID=Thaps34441.1;Parent=Thaps34441;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1317294 1318491 . - . ID=Thaps5476;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C309];external_name=Thaps5476;logic_name=jgi_thaps3 chr5 ensembl transcript 1317294 1318491 . - . ID=Thaps5476;Parent=Thaps5476;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1317294 1317808 . - 0 ID=Thaps5476;Parent=Thaps5476;rank=2 chr5 . exon 1317294 1317808 . - . ID=Thaps5476.2;Parent=Thaps5476;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1317909 1318491 . - 0 ID=Thaps5476;Parent=Thaps5476;rank=1 chr5 . repeat_region 1322409 1322429 . ? . description=trf chr5 ensembl protein_coding_gene 1318795 1321077 . + . ID=Thaps22765;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C310];external_name=Thaps22765;logic_name=jgi_thaps3 chr5 ensembl transcript 1318795 1321077 . + . ID=Thaps22765;Parent=Thaps22765;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1318795 1321077 . + 0 ID=Thaps22765;Parent=Thaps22765;rank=1 chr5 . exon 1318795 1321077 . + . ID=Thaps22765.1;Parent=Thaps22765;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1321322 1323701 . - . ID=Thaps22766;biotype=protein_coding;description=Heat shock protein Hsp90 [Source:UniProtKB/TrEMBL%3BAcc:B8C311];external_name=Thaps22766;logic_name=jgi_thaps3 chr5 ensembl transcript 1321322 1323701 . - . ID=Thaps22766;Parent=Thaps22766;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1321322 1321381 . - 0 ID=Thaps22766;Parent=Thaps22766;rank=5 chr5 . exon 1321322 1321381 . - . ID=Thaps22766.5;Parent=Thaps22766;constitutive=1;rank=5 chr5 . CDS 1321406 1322331 . - 0 ID=Thaps22766;Parent=Thaps22766;rank=4 chr5 . exon 1321406 1322331 . - . ID=Thaps22766.4;Parent=Thaps22766;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1322374 1322654 . - 0 ID=Thaps22766;Parent=Thaps22766;rank=3 chr5 . exon 1322374 1322654 . - . ID=Thaps22766.3;Parent=Thaps22766;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1322750 1323099 . - 0 ID=Thaps22766;Parent=Thaps22766;rank=2 chr5 . exon 1322750 1323099 . - . ID=Thaps22766.2;Parent=Thaps22766;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1323186 1323701 . - 0 ID=Thaps22766;Parent=Thaps22766;rank=1 chr5 . exon 1323186 1323701 . - . ID=Thaps22766.1;Parent=Thaps22766;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1326102 1328825 . - . ID=Thaps22767;biotype=protein_coding;description=Sodium/hydrogen exchanger [Source:UniProtKB/TrEMBL%3BAcc:B8C313];external_name=Thaps22767;logic_name=jgi_thaps3 chr5 ensembl transcript 1326102 1328825 . - . ID=Thaps22767;Parent=Thaps22767;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1326102 1328825 . - 0 ID=Thaps22767;Parent=Thaps22767;rank=1 chr5 . exon 1326102 1328825 . - . ID=Thaps22767.1;Parent=Thaps22767;constitutive=1;rank=1 chr5 . exon 1317909 1318491 . - . ID=Thaps5476.1;Parent=Thaps5476;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1324521 1325861 . + . ID=Thaps5479;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C312];external_name=Thaps5479;logic_name=jgi_thaps3 chr5 ensembl transcript 1324521 1325861 . + . ID=Thaps5479;Parent=Thaps5479;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1324521 1325861 . + 0 ID=Thaps5479;Parent=Thaps5479;rank=1 chr5 . exon 1324521 1325861 . + . ID=Thaps5479.1;Parent=Thaps5479;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1336285 1339071 . - . ID=Thaps22770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C316];external_name=Thaps22770;logic_name=jgi_thaps3 chr5 ensembl transcript 1336285 1339071 . - . ID=Thaps22770;Parent=Thaps22770;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1336285 1337496 . - 0 ID=Thaps22770;Parent=Thaps22770;rank=4 chr5 . exon 1336285 1337496 . - . ID=Thaps22770.4;Parent=Thaps22770;constitutive=1;rank=4 chr5 . CDS 1337714 1338072 . - 0 ID=Thaps22770;Parent=Thaps22770;rank=3 chr5 . exon 1337714 1338072 . - . ID=Thaps22770.3;Parent=Thaps22770;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1338158 1338620 . - 0 ID=Thaps22770;Parent=Thaps22770;rank=2 chr5 . CDS 1338730 1339071 . - 0 ID=Thaps22770;Parent=Thaps22770;rank=1 chr5 ensembl protein_coding_gene 1330355 1331534 . - . ID=Thaps268908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C314];external_name=Thaps268908;logic_name=jgi_thaps3 chr5 ensembl transcript 1330355 1331534 . - . ID=Thaps268908;Parent=Thaps268908;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1330355 1330907 . - 0 ID=Thaps268908;Parent=Thaps268908;rank=2 chr5 . exon 1330355 1330907 . - . ID=Thaps268908.2;Parent=Thaps268908;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1330996 1331534 . - 0 ID=Thaps268908;Parent=Thaps268908;rank=1 chr5 . exon 1330996 1331534 . - . ID=Thaps268908.1;Parent=Thaps268908;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1333710 1335178 . - . ID=Thaps34059;biotype=protein_coding;description=Calcium-dependent protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C315];external_name=Thaps34059;logic_name=jgi_thaps3 chr5 ensembl transcript 1333710 1335178 . - . ID=Thaps34059;Parent=Thaps34059;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1333710 1334636 . - 0 ID=Thaps34059;Parent=Thaps34059;rank=2 chr5 . exon 1333710 1334636 . - . ID=Thaps34059.2;Parent=Thaps34059;constitutive=1;rank=2 chr5 . CDS 1334720 1335178 . - 0 ID=Thaps34059;Parent=Thaps34059;rank=1 chr5 . exon 1334720 1335178 . - . ID=Thaps34059.1;Parent=Thaps34059;constitutive=1;rank=1 chr5 . exon 1338158 1338620 . - . ID=Thaps22770.2;Parent=Thaps22770;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 1338730 1339071 . - . ID=Thaps22770.1;Parent=Thaps22770;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1342476 1346081 . - . ID=Thaps22771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C319];external_name=Thaps22771;logic_name=jgi_thaps3 chr5 ensembl transcript 1342476 1346081 . - . ID=Thaps22771;Parent=Thaps22771;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1342476 1343332 . - 0 ID=Thaps22771;Parent=Thaps22771;rank=3 chr5 . exon 1342476 1343332 . - . ID=Thaps22771.3;Parent=Thaps22771;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1343575 1343999 . - 0 ID=Thaps22771;Parent=Thaps22771;rank=2 chr5 . exon 1343575 1343999 . - . ID=Thaps22771.2;Parent=Thaps22771;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1344331 1346081 . - 0 ID=Thaps22771;Parent=Thaps22771;rank=1 chr5 . exon 1344331 1346081 . - . ID=Thaps22771.1;Parent=Thaps22771;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1339274 1339858 . - . ID=Thaps5484;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C317];external_name=Thaps5484;logic_name=jgi_thaps3 chr5 ensembl transcript 1339274 1339858 . - . ID=Thaps5484;Parent=Thaps5484;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1339274 1339858 . - 0 ID=Thaps5484;Parent=Thaps5484;rank=1 chr5 . exon 1339274 1339858 . - . ID=Thaps5484.1;Parent=Thaps5484;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1340723 1342054 . + . ID=Thaps5485;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C318];external_name=Thaps5485;logic_name=jgi_thaps3 chr5 ensembl transcript 1340723 1342054 . + . ID=Thaps5485;Parent=Thaps5485;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1340723 1340750 . + 0 ID=Thaps5485;Parent=Thaps5485;rank=1 chr5 . exon 1340723 1340750 . + . ID=Thaps5485.1;Parent=Thaps5485;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1340783 1340931 . + 0 ID=Thaps5485;Parent=Thaps5485;rank=2 chr5 . exon 1340783 1340931 . + . ID=Thaps5485.2;Parent=Thaps5485;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1340951 1342054 . + 0 ID=Thaps5485;Parent=Thaps5485;rank=3 chr5 . exon 1340951 1342054 . + . ID=Thaps5485.3;Parent=Thaps5485;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 1346792 1347657 . + . ID=Thaps5487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C320];external_name=Thaps5487;logic_name=jgi_thaps3 chr5 ensembl transcript 1346792 1347657 . + . ID=Thaps5487;Parent=Thaps5487;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1346792 1347591 . + 0 ID=Thaps5487;Parent=Thaps5487;rank=1 chr5 . exon 1346792 1347591 . + . ID=Thaps5487.1;Parent=Thaps5487;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1347633 1347657 . + 0 ID=Thaps5487;Parent=Thaps5487;rank=2 chr5 . exon 1347633 1347657 . + . ID=Thaps5487.2;Parent=Thaps5487;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . repeat_region 1353863 1353898 . ? . description=trf chr5 . repeat_region 1353949 1354009 . ? . description=trf chr5 . repeat_region 1354185 1354290 . ? . description=trf chr5 . repeat_region 1354220 1354310 . ? . description=trf chr5 . repeat_region 1354335 1354376 . ? . description=trf chr5 . repeat_region 1354383 1354447 . ? . description=trf chr5 . repeat_region 1354926 1355068 . ? . description=trf chr5 . repeat_region 1354938 1355080 . ? . description=trf chr5 . repeat_region 1356394 1356448 . ? . description=trf chr5 ensembl protein_coding_gene 1356777 1357245 . + . ID=Thaps19991;biotype=protein_coding;description=Thioredoxin [Source:UniProtKB/TrEMBL%3BAcc:B8C324];external_name=TRX3;logic_name=jgi_thaps3 chr5 ensembl transcript 1356777 1357245 . + . ID=Thaps19991;Parent=Thaps19991;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1356777 1356880 . + 0 ID=Thaps19991;Parent=Thaps19991;rank=1 chr5 . exon 1356777 1356880 . + . ID=Thaps19991.1;Parent=Thaps19991;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1357041 1357245 . + 0 ID=Thaps19991;Parent=Thaps19991;rank=2 chr5 . exon 1357041 1357245 . + . ID=Thaps19991.2;Parent=Thaps19991;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1353640 1355141 . + . ID=Thaps22772;biotype=protein_coding;description=Serine or glycine-rich protein with nucleotide binding motif [Source:UniProtKB/TrEMBL%3BAcc:B8C322];external_name=CINW1;logic_name=jgi_thaps3 chr5 ensembl transcript 1353640 1355141 . + . ID=Thaps22772;Parent=Thaps22772;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1353640 1353729 . + 0 ID=Thaps22772;Parent=Thaps22772;rank=1 chr5 . exon 1353640 1353729 . + . ID=Thaps22772.1;Parent=Thaps22772;constitutive=1;rank=1 chr5 . CDS 1353834 1354576 . + 0 ID=Thaps22772;Parent=Thaps22772;rank=2 chr5 . exon 1353834 1354576 . + . ID=Thaps22772.2;Parent=Thaps22772;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1354670 1355141 . + 0 ID=Thaps22772;Parent=Thaps22772;rank=3 chr5 . exon 1354670 1355141 . + . ID=Thaps22772.3;Parent=Thaps22772;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 1355566 1356384 . - . ID=Thaps268911;biotype=protein_coding;description=Methyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8C323];external_name=Thaps268911;logic_name=jgi_thaps3 chr5 ensembl transcript 1355566 1356384 . - . ID=Thaps268911;Parent=Thaps268911;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1355566 1355992 . - 0 ID=Thaps268911;Parent=Thaps268911;rank=2 chr5 . exon 1355566 1355992 . - . ID=Thaps268911.2;Parent=Thaps268911;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1356062 1356384 . - 0 ID=Thaps268911;Parent=Thaps268911;rank=1 chr5 . exon 1356062 1356384 . - . ID=Thaps268911.1;Parent=Thaps268911;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1347936 1350867 . - . ID=Thaps5488;biotype=protein_coding;description=Cyclic nucleotide and voltage-activated ion channel [Source:UniProtKB/TrEMBL%3BAcc:B8C321];external_name=Thaps5488;logic_name=jgi_thaps3 chr5 ensembl transcript 1347936 1350867 . - . ID=Thaps5488;Parent=Thaps5488;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1347936 1348355 . - 0 ID=Thaps5488;Parent=Thaps5488;rank=5 chr5 . exon 1347936 1348355 . - . ID=Thaps5488.5;Parent=Thaps5488;constitutive=1;rank=5 chr5 . CDS 1348430 1348988 . - 0 ID=Thaps5488;Parent=Thaps5488;rank=4 chr5 . exon 1348430 1348988 . - . ID=Thaps5488.4;Parent=Thaps5488;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1349085 1349473 . - 0 ID=Thaps5488;Parent=Thaps5488;rank=3 chr5 . exon 1349085 1349473 . - . ID=Thaps5488.3;Parent=Thaps5488;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1349560 1350429 . - 0 ID=Thaps5488;Parent=Thaps5488;rank=2 chr5 . exon 1349560 1350429 . - . ID=Thaps5488.2;Parent=Thaps5488;constitutive=1;rank=2 chr5 . CDS 1350496 1350867 . - 0 ID=Thaps5488;Parent=Thaps5488;rank=1 chr5 . exon 1350496 1350867 . - . ID=Thaps5488.1;Parent=Thaps5488;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1362471 1364156 . - . ID=Thaps22776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C326];external_name=Thaps22776;logic_name=jgi_thaps3 chr5 ensembl transcript 1362471 1364156 . - . ID=Thaps22776;Parent=Thaps22776;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1362471 1364156 . - 0 ID=Thaps22776;Parent=Thaps22776;rank=1 chr5 . exon 1362471 1364156 . - . ID=Thaps22776.1;Parent=Thaps22776;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1364470 1368725 . + . ID=Thaps22777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C327];external_name=Thaps22777;logic_name=jgi_thaps3 chr5 ensembl transcript 1364470 1368725 . + . ID=Thaps22777;Parent=Thaps22777;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1364470 1365422 . + 0 ID=Thaps22777;Parent=Thaps22777;rank=1 chr5 . exon 1364470 1365422 . + . ID=Thaps22777.1;Parent=Thaps22777;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1365539 1368303 . + 0 ID=Thaps22777;Parent=Thaps22777;rank=2 chr5 . exon 1365539 1368303 . + . ID=Thaps22777.2;Parent=Thaps22777;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1368391 1368725 . + 0 ID=Thaps22777;Parent=Thaps22777;rank=3 chr5 ensembl protein_coding_gene 1357853 1359825 . - . ID=Thaps40767;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C325];external_name=Thaps40767;logic_name=jgi_thaps3 chr5 ensembl transcript 1357853 1359825 . - . ID=Thaps40767;Parent=Thaps40767;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1357853 1358267 . - 0 ID=Thaps40767;Parent=Thaps40767;rank=5 chr5 . exon 1357853 1358267 . - . ID=Thaps40767.5;Parent=Thaps40767;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1358359 1358387 . - 0 ID=Thaps40767;Parent=Thaps40767;rank=4 chr5 . exon 1358359 1358387 . - . ID=Thaps40767.4;Parent=Thaps40767;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1358465 1358740 . - 0 ID=Thaps40767;Parent=Thaps40767;rank=3 chr5 . exon 1358465 1358740 . - . ID=Thaps40767.3;Parent=Thaps40767;constitutive=1;rank=3 chr5 . CDS 1358819 1359334 . - 0 ID=Thaps40767;Parent=Thaps40767;rank=2 chr5 . exon 1358819 1359334 . - . ID=Thaps40767.2;Parent=Thaps40767;constitutive=1;rank=2 chr5 . CDS 1359406 1359825 . - 0 ID=Thaps40767;Parent=Thaps40767;rank=1 chr5 . exon 1359406 1359825 . - . ID=Thaps40767.1;Parent=Thaps40767;constitutive=1;rank=1 chr5 . repeat_region 1373121 1373128 . ? . description=dust chr5 . repeat_region 1377093 1377118 . ? . description=trf chr5 . exon 1368391 1368725 . + . ID=Thaps22777.3;Parent=Thaps22777;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 1374069 1376141 . - . ID=Thaps22778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C330];external_name=Thaps22778;logic_name=jgi_thaps3 chr5 ensembl transcript 1374069 1376141 . - . ID=Thaps22778;Parent=Thaps22778;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1374069 1376141 . - 0 ID=Thaps22778;Parent=Thaps22778;rank=1 chr5 . exon 1374069 1376141 . - . ID=Thaps22778.1;Parent=Thaps22778;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1368810 1370240 . - . ID=Thaps5496;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C328];external_name=Thaps5496;logic_name=jgi_thaps3 chr5 ensembl transcript 1368810 1370240 . - . ID=Thaps5496;Parent=Thaps5496;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1368810 1370240 . - 0 ID=Thaps5496;Parent=Thaps5496;rank=1 chr5 . exon 1368810 1370240 . - . ID=Thaps5496.1;Parent=Thaps5496;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1370937 1373753 . + . ID=Thaps5497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C329];external_name=Thaps5497;logic_name=jgi_thaps3 chr5 ensembl transcript 1370937 1373753 . + . ID=Thaps5497;Parent=Thaps5497;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1370937 1373753 . + 0 ID=Thaps5497;Parent=Thaps5497;rank=1 chr5 . exon 1370937 1373753 . + . ID=Thaps5497.1;Parent=Thaps5497;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1376401 1376952 . + . ID=Thaps5499;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C331];external_name=Thaps5499;logic_name=jgi_thaps3 chr5 ensembl transcript 1376401 1376952 . + . ID=Thaps5499;Parent=Thaps5499;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1376401 1376952 . + 0 ID=Thaps5499;Parent=Thaps5499;rank=1 chr5 . exon 1376401 1376952 . + . ID=Thaps5499.1;Parent=Thaps5499;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1377134 1380283 . - . ID=Thaps5500;biotype=protein_coding;description=Pyruvate phosphate dikinase [Source:UniProtKB/TrEMBL%3BAcc:B8C332];external_name=PDK1_2;logic_name=jgi_thaps3 chr5 ensembl transcript 1377134 1380283 . - . ID=Thaps5500;Parent=Thaps5500;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1377134 1378206 . - 0 ID=Thaps5500;Parent=Thaps5500;rank=5 chr5 . exon 1377134 1378206 . - . ID=Thaps5500.5;Parent=Thaps5500;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 1378291 1378562 . - 0 ID=Thaps5500;Parent=Thaps5500;rank=4 chr5 . CDS 1378651 1378756 . - 0 ID=Thaps5500;Parent=Thaps5500;rank=3 chr5 . CDS 1378845 1379885 . - 0 ID=Thaps5500;Parent=Thaps5500;rank=2 chr5 . CDS 1379974 1380283 . - 0 ID=Thaps5500;Parent=Thaps5500;rank=1 chr5 ensembl protein_coding_gene 1380866 1382302 . + . ID=Thaps14147;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C333];external_name=Thaps14147;logic_name=jgi_thaps3 chr5 ensembl transcript 1380866 1382302 . + . ID=Thaps14147;Parent=Thaps14147;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1380866 1381132 . + 0 ID=Thaps14147;Parent=Thaps14147;rank=1 chr5 . exon 1380866 1381132 . + . ID=Thaps14147.1;Parent=Thaps14147;constitutive=1;rank=1 chr5 . CDS 1381222 1381290 . + 0 ID=Thaps14147;Parent=Thaps14147;rank=2 chr5 . exon 1381222 1381290 . + . ID=Thaps14147.2;Parent=Thaps14147;constitutive=1;rank=2 chr5 . CDS 1381381 1382161 . + 0 ID=Thaps14147;Parent=Thaps14147;rank=3 chr5 . exon 1381381 1382161 . + . ID=Thaps14147.3;Parent=Thaps14147;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1382232 1382302 . + 0 ID=Thaps14147;Parent=Thaps14147;rank=4 chr5 . exon 1382232 1382302 . + . ID=Thaps14147.4;Parent=Thaps14147;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 1387498 1388663 . + . ID=Thaps262553;biotype=protein_coding;description=Chloride channel protein [Source:UniProtKB/TrEMBL%3BAcc:B8C337];external_name=Thaps262553;logic_name=jgi_thaps3 chr5 ensembl transcript 1387498 1388663 . + . ID=Thaps262553;Parent=Thaps262553;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1387498 1387597 . + 0 ID=Thaps262553;Parent=Thaps262553;rank=1 chr5 . exon 1387498 1387597 . + . ID=Thaps262553.1;Parent=Thaps262553;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1387661 1387812 . + 0 ID=Thaps262553;Parent=Thaps262553;rank=2 chr5 . CDS 1387930 1388445 . + 0 ID=Thaps262553;Parent=Thaps262553;rank=3 chr5 . CDS 1388497 1388663 . + 0 ID=Thaps262553;Parent=Thaps262553;rank=4 chr5 . exon 1378291 1378562 . - . ID=Thaps5500.4;Parent=Thaps5500;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . exon 1378651 1378756 . - . ID=Thaps5500.3;Parent=Thaps5500;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . exon 1378845 1379885 . - . ID=Thaps5500.2;Parent=Thaps5500;constitutive=1;rank=2 chr5 . exon 1379974 1380283 . - . ID=Thaps5500.1;Parent=Thaps5500;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1382475 1383215 . - . ID=Thaps5502;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C334];external_name=Thaps5502;logic_name=jgi_thaps3 chr5 ensembl transcript 1382475 1383215 . - . ID=Thaps5502;Parent=Thaps5502;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1382475 1383215 . - 0 ID=Thaps5502;Parent=Thaps5502;rank=1 chr5 . exon 1382475 1383215 . - . ID=Thaps5502.1;Parent=Thaps5502;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1383652 1384617 . + . ID=Thaps5503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C335];external_name=Thaps5503;logic_name=jgi_thaps3 chr5 ensembl transcript 1383652 1384617 . + . ID=Thaps5503;Parent=Thaps5503;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1383652 1384617 . + 0 ID=Thaps5503;Parent=Thaps5503;rank=1 chr5 . exon 1383652 1384617 . + . ID=Thaps5503.1;Parent=Thaps5503;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1384820 1386329 . - . ID=Thaps5504;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C336];external_name=Thaps5504;logic_name=jgi_thaps3 chr5 ensembl transcript 1384820 1386329 . - . ID=Thaps5504;Parent=Thaps5504;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1384820 1385629 . - 0 ID=Thaps5504;Parent=Thaps5504;rank=3 chr5 . exon 1384820 1385629 . - . ID=Thaps5504.3;Parent=Thaps5504;constitutive=1;rank=3 chr5 . CDS 1385726 1385929 . - 0 ID=Thaps5504;Parent=Thaps5504;rank=2 chr5 . exon 1385726 1385929 . - . ID=Thaps5504.2;Parent=Thaps5504;constitutive=1;rank=2 chr5 . CDS 1386042 1386329 . - 0 ID=Thaps5504;Parent=Thaps5504;rank=1 chr5 . exon 1386042 1386329 . - . ID=Thaps5504.1;Parent=Thaps5504;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1392933 1395095 . + . ID=Thaps22780;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C340];external_name=Thaps22780;logic_name=jgi_thaps3 chr5 ensembl transcript 1392933 1395095 . + . ID=Thaps22780;Parent=Thaps22780;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1392933 1395095 . + 0 ID=Thaps22780;Parent=Thaps22780;rank=1 chr5 . exon 1392933 1395095 . + . ID=Thaps22780.1;Parent=Thaps22780;constitutive=1;rank=1 chr5 . exon 1387661 1387812 . + . ID=Thaps262553.2;Parent=Thaps262553;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 1387930 1388445 . + . ID=Thaps262553.3;Parent=Thaps262553;constitutive=1;rank=3 chr5 . exon 1388497 1388663 . + . ID=Thaps262553.4;Parent=Thaps262553;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 1390284 1391094 . + . ID=Thaps262554;biotype=protein_coding;description=Lipase/esterase [Source:UniProtKB/TrEMBL%3BAcc:B8C338];external_name=Thaps262554;logic_name=jgi_thaps3 chr5 ensembl transcript 1390284 1391094 . + . ID=Thaps262554;Parent=Thaps262554;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1390284 1390634 . + 0 ID=Thaps262554;Parent=Thaps262554;rank=1 chr5 . exon 1390284 1390634 . + . ID=Thaps262554.1;Parent=Thaps262554;constitutive=1;rank=1 chr5 . CDS 1390725 1390939 . + 0 ID=Thaps262554;Parent=Thaps262554;rank=2 chr5 . exon 1390725 1390939 . + . ID=Thaps262554.2;Parent=Thaps262554;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1391009 1391094 . + 0 ID=Thaps262554;Parent=Thaps262554;rank=3 chr5 . exon 1391009 1391094 . + . ID=Thaps262554.3;Parent=Thaps262554;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 1391206 1392733 . - . ID=Thaps262555;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C339];external_name=Thaps262555;logic_name=jgi_thaps3 chr5 ensembl transcript 1391206 1392733 . - . ID=Thaps262555;Parent=Thaps262555;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1391206 1391461 . - 0 ID=Thaps262555;Parent=Thaps262555;rank=4 chr5 . exon 1391206 1391461 . - . ID=Thaps262555.4;Parent=Thaps262555;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1391486 1391919 . - 0 ID=Thaps262555;Parent=Thaps262555;rank=3 chr5 . exon 1391486 1391919 . - . ID=Thaps262555.3;Parent=Thaps262555;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1391941 1392548 . - 0 ID=Thaps262555;Parent=Thaps262555;rank=2 chr5 . exon 1391941 1392548 . - . ID=Thaps262555.2;Parent=Thaps262555;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1392603 1392733 . - 0 ID=Thaps262555;Parent=Thaps262555;rank=1 chr5 . exon 1392603 1392733 . - . ID=Thaps262555.1;Parent=Thaps262555;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1395170 1396435 . - . ID=Thaps5509;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C341];external_name=Thaps5509;logic_name=jgi_thaps3 chr5 ensembl transcript 1395170 1396435 . - . ID=Thaps5509;Parent=Thaps5509;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1395170 1396030 . - 0 ID=Thaps5509;Parent=Thaps5509;rank=2 chr5 . exon 1395170 1396030 . - . ID=Thaps5509.2;Parent=Thaps5509;constitutive=1;rank=2 chr5 . CDS 1396106 1396435 . - 0 ID=Thaps5509;Parent=Thaps5509;rank=1 chr5 . exon 1396106 1396435 . - . ID=Thaps5509.1;Parent=Thaps5509;constitutive=1;rank=1 chr5 . repeat_region 1403478 1403533 . ? . description=dust chr5 ensembl protein_coding_gene 1401921 1405334 . - . ID=Thaps22781;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C344];external_name=Thaps22781;logic_name=jgi_thaps3 chr5 ensembl transcript 1401921 1405334 . - . ID=Thaps22781;Parent=Thaps22781;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1401921 1402871 . - 0 ID=Thaps22781;Parent=Thaps22781;rank=3 chr5 . exon 1401921 1402871 . - . ID=Thaps22781.3;Parent=Thaps22781;constitutive=1;rank=3 chr5 . CDS 1402952 1403441 . - 0 ID=Thaps22781;Parent=Thaps22781;rank=2 chr5 . exon 1402952 1403441 . - . ID=Thaps22781.2;Parent=Thaps22781;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1403527 1405334 . - 0 ID=Thaps22781;Parent=Thaps22781;rank=1 chr5 . exon 1403527 1405334 . - . ID=Thaps22781.1;Parent=Thaps22781;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1397936 1399056 . - . ID=Thaps5510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C342];external_name=Thaps5510;logic_name=jgi_thaps3 chr5 ensembl transcript 1397936 1399056 . - . ID=Thaps5510;Parent=Thaps5510;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1397936 1398517 . - 0 ID=Thaps5510;Parent=Thaps5510;rank=3 chr5 . exon 1397936 1398517 . - . ID=Thaps5510.3;Parent=Thaps5510;constitutive=1;rank=3 chr5 . CDS 1398629 1398676 . - 0 ID=Thaps5510;Parent=Thaps5510;rank=2 chr5 . exon 1398629 1398676 . - . ID=Thaps5510.2;Parent=Thaps5510;constitutive=1;rank=2 chr5 . CDS 1398757 1399056 . - 0 ID=Thaps5510;Parent=Thaps5510;rank=1 chr5 . exon 1398757 1399056 . - . ID=Thaps5510.1;Parent=Thaps5510;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1400081 1401703 . + . ID=Thaps5511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C343];external_name=Thaps5511;logic_name=jgi_thaps3 chr5 ensembl transcript 1400081 1401703 . + . ID=Thaps5511;Parent=Thaps5511;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1400081 1400731 . + 0 ID=Thaps5511;Parent=Thaps5511;rank=1 chr5 . exon 1400081 1400731 . + . ID=Thaps5511.1;Parent=Thaps5511;constitutive=1;rank=1 chr5 . CDS 1400813 1401252 . + 0 ID=Thaps5511;Parent=Thaps5511;rank=2 chr5 . exon 1400813 1401252 . + . ID=Thaps5511.2;Parent=Thaps5511;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1401286 1401703 . + 0 ID=Thaps5511;Parent=Thaps5511;rank=3 chr5 . exon 1401286 1401703 . + . ID=Thaps5511.3;Parent=Thaps5511;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 1405753 1408270 . + . ID=Thaps5513;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C345];external_name=Thaps5513;logic_name=jgi_thaps3 chr5 ensembl transcript 1405753 1408270 . + . ID=Thaps5513;Parent=Thaps5513;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1405753 1405759 . + 0 ID=Thaps5513;Parent=Thaps5513;rank=1 chr5 . exon 1405753 1405759 . + . ID=Thaps5513.1;Parent=Thaps5513;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1405858 1407462 . + 0 ID=Thaps5513;Parent=Thaps5513;rank=2 chr5 . exon 1405858 1407462 . + . ID=Thaps5513.2;Parent=Thaps5513;constitutive=1;rank=2 chr5 . CDS 1407540 1407784 . + 0 ID=Thaps5513;Parent=Thaps5513;rank=3 chr5 . exon 1407540 1407784 . + . ID=Thaps5513.3;Parent=Thaps5513;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1407866 1408270 . + 0 ID=Thaps5513;Parent=Thaps5513;rank=4 chr5 . repeat_region 1411987 1412028 . ? . description=trf chr5 ensembl protein_coding_gene 1412248 1413591 . - . ID=Thaps22782;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C348];external_name=Thaps22782;logic_name=jgi_thaps3 chr5 ensembl transcript 1412248 1413591 . - . ID=Thaps22782;Parent=Thaps22782;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1412248 1413591 . - 0 ID=Thaps22782;Parent=Thaps22782;rank=1 chr5 . exon 1412248 1413591 . - . ID=Thaps22782.1;Parent=Thaps22782;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1414043 1416751 . + . ID=Thaps22783;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C349];external_name=Thaps22783;logic_name=jgi_thaps3 chr5 ensembl transcript 1414043 1416751 . + . ID=Thaps22783;Parent=Thaps22783;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1414043 1414632 . + 0 ID=Thaps22783;Parent=Thaps22783;rank=1 chr5 . exon 1414043 1414632 . + . ID=Thaps22783.1;Parent=Thaps22783;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1414734 1415662 . + 0 ID=Thaps22783;Parent=Thaps22783;rank=2 chr5 . exon 1414734 1415662 . + . ID=Thaps22783.2;Parent=Thaps22783;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1415740 1415895 . + 0 ID=Thaps22783;Parent=Thaps22783;rank=3 chr5 . exon 1415740 1415895 . + . ID=Thaps22783.3;Parent=Thaps22783;constitutive=1;rank=3 chr5 . CDS 1415962 1416271 . + 0 ID=Thaps22783;Parent=Thaps22783;rank=4 chr5 . exon 1415962 1416271 . + . ID=Thaps22783.4;Parent=Thaps22783;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1416355 1416414 . + 0 ID=Thaps22783;Parent=Thaps22783;rank=5 chr5 . exon 1416355 1416414 . + . ID=Thaps22783.5;Parent=Thaps22783;constitutive=1;rank=5 chr5 . CDS 1416481 1416751 . + 0 ID=Thaps22783;Parent=Thaps22783;rank=6 chr5 . exon 1416481 1416751 . + . ID=Thaps22783.6;Parent=Thaps22783;constitutive=1;ensembl_end_phase=1;rank=6 chr5 ensembl protein_coding_gene 1416817 1418931 . - . ID=Thaps22784;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C350];external_name=Thaps22784;logic_name=jgi_thaps3 chr5 ensembl transcript 1416817 1418931 . - . ID=Thaps22784;Parent=Thaps22784;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1416817 1418931 . - 0 ID=Thaps22784;Parent=Thaps22784;rank=1 chr5 . exon 1416817 1418931 . - . ID=Thaps22784.1;Parent=Thaps22784;constitutive=1;rank=1 chr5 ensembl gene 1408735 1409527 . + . ID=Thaps262559;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr5 ensembl transcript 1408735 1409527 . + . ID=Thaps262559;Parent=Thaps262559;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr5 . exon 1408735 1408766 . + . ID=Thaps262559.1;Parent=Thaps262559;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 1408890 1409235 . + . ID=Thaps262559.2;Parent=Thaps262559;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 1409345 1409527 . + . ID=Thaps262559.3;Parent=Thaps262559;constitutive=1;rank=3 chr5 . exon 1407866 1408270 . + . ID=Thaps5513.4;Parent=Thaps5513;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 1409884 1410919 . - . ID=Thaps5514;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C346];external_name=Thaps5514;logic_name=jgi_thaps3 chr5 ensembl transcript 1409884 1410919 . - . ID=Thaps5514;Parent=Thaps5514;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1409884 1410519 . - 0 ID=Thaps5514;Parent=Thaps5514;rank=2 chr5 . exon 1409884 1410519 . - . ID=Thaps5514.2;Parent=Thaps5514;constitutive=1;rank=2 chr5 . CDS 1410641 1410919 . - 0 ID=Thaps5514;Parent=Thaps5514;rank=1 chr5 . exon 1410641 1410919 . - . ID=Thaps5514.1;Parent=Thaps5514;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1411223 1411980 . + . ID=Thaps5515;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C347];external_name=Thaps5515;logic_name=jgi_thaps3 chr5 ensembl transcript 1411223 1411980 . + . ID=Thaps5515;Parent=Thaps5515;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1411223 1411628 . + 0 ID=Thaps5515;Parent=Thaps5515;rank=1 chr5 . exon 1411223 1411628 . + . ID=Thaps5515.1;Parent=Thaps5515;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1411672 1411746 . + 0 ID=Thaps5515;Parent=Thaps5515;rank=2 chr5 . exon 1411672 1411746 . + . ID=Thaps5515.2;Parent=Thaps5515;constitutive=1;rank=2 chr5 . CDS 1411871 1411980 . + 0 ID=Thaps5515;Parent=Thaps5515;rank=3 chr5 . exon 1411871 1411980 . + . ID=Thaps5515.3;Parent=Thaps5515;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . repeat_region 1424823 1424853 . ? . description=dust chr5 ensembl protein_coding_gene 1420838 1422286 . + . ID=Thaps22785;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C352];external_name=Thaps22785;logic_name=jgi_thaps3 chr5 ensembl transcript 1420838 1422286 . + . ID=Thaps22785;Parent=Thaps22785;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1420838 1420847 . + 0 ID=Thaps22785;Parent=Thaps22785;rank=1 chr5 . exon 1420838 1420847 . + . ID=Thaps22785.1;Parent=Thaps22785;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1420911 1421197 . + 0 ID=Thaps22785;Parent=Thaps22785;rank=2 chr5 . exon 1420911 1421197 . + . ID=Thaps22785.2;Parent=Thaps22785;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1421333 1421836 . + 0 ID=Thaps22785;Parent=Thaps22785;rank=3 chr5 . exon 1421333 1421836 . + . ID=Thaps22785.3;Parent=Thaps22785;constitutive=1;rank=3 chr5 . CDS 1421873 1422286 . + 0 ID=Thaps22785;Parent=Thaps22785;rank=4 chr5 . exon 1421873 1422286 . + . ID=Thaps22785.4;Parent=Thaps22785;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 1423316 1424363 . - . ID=Thaps28350;biotype=protein_coding;description=Phosphoglycerate mutase [Source:UniProtKB/TrEMBL%3BAcc:B8C354];external_name=PGAM1;logic_name=jgi_thaps3 chr5 ensembl transcript 1423316 1424363 . - . ID=Thaps28350;Parent=Thaps28350;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1423316 1423846 . - 0 ID=Thaps28350;Parent=Thaps28350;rank=3 chr5 . exon 1423316 1423846 . - . ID=Thaps28350.3;Parent=Thaps28350;constitutive=1;rank=3 chr5 . CDS 1423924 1424243 . - 0 ID=Thaps28350;Parent=Thaps28350;rank=2 chr5 . exon 1423924 1424243 . - . ID=Thaps28350.2;Parent=Thaps28350;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1424333 1424363 . - 0 ID=Thaps28350;Parent=Thaps28350;rank=1 chr5 . exon 1424333 1424363 . - . ID=Thaps28350.1;Parent=Thaps28350;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1422505 1422951 . - . ID=Thaps34158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C353];external_name=Thaps34158;logic_name=jgi_thaps3 chr5 ensembl transcript 1422505 1422951 . - . ID=Thaps34158;Parent=Thaps34158;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1422505 1422951 . - 0 ID=Thaps34158;Parent=Thaps34158;rank=1 chr5 . exon 1422505 1422951 . - . ID=Thaps34158.1;Parent=Thaps34158;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1424972 1426571 . + . ID=Thaps40771;biotype=protein_coding;description=Enolase [Source:UniProtKB/TrEMBL%3BAcc:B8C355];external_name=ENO2;logic_name=jgi_thaps3 chr5 ensembl transcript 1424972 1426571 . + . ID=Thaps40771;Parent=Thaps40771;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1424972 1425037 . + 0 ID=Thaps40771;Parent=Thaps40771;rank=1 chr5 . exon 1424972 1425037 . + . ID=Thaps40771.1;Parent=Thaps40771;constitutive=1;rank=1 chr5 . CDS 1425244 1425499 . + 0 ID=Thaps40771;Parent=Thaps40771;rank=2 chr5 . exon 1425244 1425499 . + . ID=Thaps40771.2;Parent=Thaps40771;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1425583 1426571 . + 0 ID=Thaps40771;Parent=Thaps40771;rank=3 chr5 . exon 1425583 1426571 . + . ID=Thaps40771.3;Parent=Thaps40771;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 1426993 1430071 . + . ID=Thaps40774;biotype=protein_coding;description=Alanine-trna ligase [Source:UniProtKB/TrEMBL%3BAcc:B8C356];external_name=ALATS2;logic_name=jgi_thaps3 chr5 ensembl transcript 1426993 1430071 . + . ID=Thaps40774;Parent=Thaps40774;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1426993 1427316 . + 0 ID=Thaps40774;Parent=Thaps40774;rank=1 chr5 . exon 1426993 1427316 . + . ID=Thaps40774.1;Parent=Thaps40774;constitutive=1;rank=1 chr5 . CDS 1427405 1427662 . + 0 ID=Thaps40774;Parent=Thaps40774;rank=2 chr5 . exon 1427405 1427662 . + . ID=Thaps40774.2;Parent=Thaps40774;constitutive=1;rank=2 chr5 . CDS 1427753 1430071 . + 0 ID=Thaps40774;Parent=Thaps40774;rank=3 chr5 ensembl protein_coding_gene 1419235 1420692 . - . ID=Thaps5519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C351];external_name=Thaps5519;logic_name=jgi_thaps3 chr5 ensembl transcript 1419235 1420692 . - . ID=Thaps5519;Parent=Thaps5519;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1419235 1420003 . - 0 ID=Thaps5519;Parent=Thaps5519;rank=3 chr5 . exon 1419235 1420003 . - . ID=Thaps5519.3;Parent=Thaps5519;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1420080 1420342 . - 0 ID=Thaps5519;Parent=Thaps5519;rank=2 chr5 . exon 1420080 1420342 . - . ID=Thaps5519.2;Parent=Thaps5519;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1420549 1420692 . - 0 ID=Thaps5519;Parent=Thaps5519;rank=1 chr5 . exon 1420549 1420692 . - . ID=Thaps5519.1;Parent=Thaps5519;constitutive=1;rank=1 chr5 . repeat_region 1430910 1430937 . ? . description=trf chr5 . repeat_region 1433009 1433042 . ? . description=trf chr5 . repeat_region 1433255 1433275 . ? . description=trf chr5 ensembl protein_coding_gene 1436707 1437454 . - . ID=Thaps262564;biotype=protein_coding;description=V-type h-atpase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C360];external_name=Thaps262564;logic_name=jgi_thaps3 chr5 ensembl transcript 1436707 1437454 . - . ID=Thaps262564;Parent=Thaps262564;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1436707 1437454 . - 0 ID=Thaps262564;Parent=Thaps262564;rank=1 chr5 . exon 1436707 1437454 . - . ID=Thaps262564.1;Parent=Thaps262564;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1434158 1436335 . - . ID=Thaps34187;biotype=protein_coding;description=Acetyl-coenzyme a synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C359];external_name=ACAS2;logic_name=jgi_thaps3 chr5 ensembl transcript 1434158 1436335 . - . ID=Thaps34187;Parent=Thaps34187;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1434158 1434871 . - 0 ID=Thaps34187;Parent=Thaps34187;rank=4 chr5 . exon 1434158 1434871 . - . ID=Thaps34187.4;Parent=Thaps34187;constitutive=1;rank=4 chr5 . CDS 1434962 1435266 . - 0 ID=Thaps34187;Parent=Thaps34187;rank=3 chr5 . exon 1434962 1435266 . - . ID=Thaps34187.3;Parent=Thaps34187;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1435335 1435491 . - 0 ID=Thaps34187;Parent=Thaps34187;rank=2 chr5 . exon 1435335 1435491 . - . ID=Thaps34187.2;Parent=Thaps34187;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1435574 1436335 . - 0 ID=Thaps34187;Parent=Thaps34187;rank=1 chr5 . exon 1435574 1436335 . - . ID=Thaps34187.1;Parent=Thaps34187;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1433352 1433926 . - . ID=Thaps34447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C358];external_name=Thaps34447;logic_name=jgi_thaps3 chr5 ensembl transcript 1433352 1433926 . - . ID=Thaps34447;Parent=Thaps34447;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1433352 1433512 . - 0 ID=Thaps34447;Parent=Thaps34447;rank=2 chr5 . exon 1433352 1433512 . - . ID=Thaps34447.2;Parent=Thaps34447;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1433827 1433926 . - 0 ID=Thaps34447;Parent=Thaps34447;rank=1 chr5 . exon 1433827 1433926 . - . ID=Thaps34447.1;Parent=Thaps34447;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . exon 1427753 1430071 . + . ID=Thaps40774.3;Parent=Thaps40774;constitutive=1;rank=3 chr5 . repeat_region 1439250 1439309 . ? . description=dust chr5 . repeat_region 1444331 1444351 . ? . description=dust chr5 . repeat_region 1446048 1446080 . ? . description=dust chr5 ensembl protein_coding_gene 1438950 1441368 . + . ID=Thaps22790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C361];external_name=Thaps22790;logic_name=jgi_thaps3 chr5 ensembl transcript 1438950 1441368 . + . ID=Thaps22790;Parent=Thaps22790;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1438950 1439823 . + 0 ID=Thaps22790;Parent=Thaps22790;rank=1 chr5 . exon 1438950 1439823 . + . ID=Thaps22790.1;Parent=Thaps22790;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1439924 1441368 . + 0 ID=Thaps22790;Parent=Thaps22790;rank=2 chr5 . exon 1439924 1441368 . + . ID=Thaps22790.2;Parent=Thaps22790;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1443569 1445076 . + . ID=Thaps22792;biotype=protein_coding;description=Ypt1-like rab-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B8C362];external_name=Thaps22792;logic_name=jgi_thaps3 chr5 ensembl transcript 1443569 1445076 . + . ID=Thaps22792;Parent=Thaps22792;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1443569 1443582 . + 0 ID=Thaps22792;Parent=Thaps22792;rank=1 chr5 . exon 1443569 1443582 . + . ID=Thaps22792.1;Parent=Thaps22792;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1444123 1444243 . + 0 ID=Thaps22792;Parent=Thaps22792;rank=2 chr5 . exon 1444123 1444243 . + . ID=Thaps22792.2;Parent=Thaps22792;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1444606 1445076 . + 0 ID=Thaps22792;Parent=Thaps22792;rank=3 chr5 . exon 1444606 1445076 . + . ID=Thaps22792.3;Parent=Thaps22792;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 1447379 1448521 . + . ID=Thaps22794;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C365];external_name=Thaps22794;logic_name=jgi_thaps3 chr5 ensembl transcript 1447379 1448521 . + . ID=Thaps22794;Parent=Thaps22794;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1447379 1448521 . + 0 ID=Thaps22794;Parent=Thaps22794;rank=1 chr5 . exon 1447379 1448521 . + . ID=Thaps22794.1;Parent=Thaps22794;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1445309 1445983 . - . ID=Thaps5532;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C363];external_name=Thaps5532;logic_name=jgi_thaps3 chr5 ensembl transcript 1445309 1445983 . - . ID=Thaps5532;Parent=Thaps5532;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1445309 1445983 . - 0 ID=Thaps5532;Parent=Thaps5532;rank=1 chr5 . exon 1445309 1445983 . - . ID=Thaps5532.1;Parent=Thaps5532;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1446340 1447035 . - . ID=Thaps5533;biotype=protein_coding;external_name=Thaps5533;logic_name=jgi_thaps3 chr5 ensembl transcript 1446340 1447035 . - . ID=Thaps5533;Parent=Thaps5533;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1446340 1446861 . - 0 ID=Thaps5533;Parent=Thaps5533;rank=2 chr5 . exon 1446340 1446861 . - . ID=Thaps5533.2;Parent=Thaps5533;constitutive=1;rank=2 chr5 . CDS 1446940 1447035 . - 0 ID=Thaps5533;Parent=Thaps5533;rank=1 chr5 . exon 1446940 1447035 . - . ID=Thaps5533.1;Parent=Thaps5533;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1448718 1449424 . - . ID=Thaps22795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C366];external_name=Thaps22795;logic_name=jgi_thaps3 chr5 ensembl transcript 1448718 1449424 . - . ID=Thaps22795;Parent=Thaps22795;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1448718 1448997 . - 0 ID=Thaps22795;Parent=Thaps22795;rank=2 chr5 . exon 1448718 1448997 . - . ID=Thaps22795.2;Parent=Thaps22795;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1449102 1449424 . - 0 ID=Thaps22795;Parent=Thaps22795;rank=1 chr5 . exon 1449102 1449424 . - . ID=Thaps22795.1;Parent=Thaps22795;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1449947 1451470 . - . ID=Thaps22796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C367];external_name=Thaps22796;logic_name=jgi_thaps3 chr5 ensembl transcript 1449947 1451470 . - . ID=Thaps22796;Parent=Thaps22796;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1449947 1451470 . - 0 ID=Thaps22796;Parent=Thaps22796;rank=1 chr5 . exon 1449947 1451470 . - . ID=Thaps22796.1;Parent=Thaps22796;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1454568 1458748 . + . ID=Thaps22799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C370];external_name=Thaps22799;logic_name=jgi_thaps3 chr5 ensembl transcript 1454568 1458748 . + . ID=Thaps22799;Parent=Thaps22799;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1454568 1454608 . + 0 ID=Thaps22799;Parent=Thaps22799;rank=1 chr5 . exon 1454568 1454608 . + . ID=Thaps22799.1;Parent=Thaps22799;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1454747 1457091 . + 0 ID=Thaps22799;Parent=Thaps22799;rank=2 chr5 . exon 1454747 1457091 . + . ID=Thaps22799.2;Parent=Thaps22799;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1457183 1457203 . + 0 ID=Thaps22799;Parent=Thaps22799;rank=3 chr5 . exon 1457183 1457203 . + . ID=Thaps22799.3;Parent=Thaps22799;constitutive=1;rank=3 chr5 . CDS 1457295 1458061 . + 0 ID=Thaps22799;Parent=Thaps22799;rank=4 chr5 . exon 1457295 1458061 . + . ID=Thaps22799.4;Parent=Thaps22799;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1458134 1458417 . + 0 ID=Thaps22799;Parent=Thaps22799;rank=5 chr5 . CDS 1458499 1458629 . + 0 ID=Thaps22799;Parent=Thaps22799;rank=6 chr5 . CDS 1458708 1458748 . + 0 ID=Thaps22799;Parent=Thaps22799;rank=7 chr5 ensembl protein_coding_gene 1451997 1452972 . + . ID=Thaps262567;biotype=protein_coding;description=Aldo-keto reductase [Source:UniProtKB/TrEMBL%3BAcc:B8C368];external_name=Thaps262567;logic_name=jgi_thaps3 chr5 ensembl transcript 1451997 1452972 . + . ID=Thaps262567;Parent=Thaps262567;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1451997 1452095 . + 0 ID=Thaps262567;Parent=Thaps262567;rank=1 chr5 . exon 1451997 1452095 . + . ID=Thaps262567.1;Parent=Thaps262567;constitutive=1;rank=1 chr5 . CDS 1452156 1452972 . + 0 ID=Thaps262567;Parent=Thaps262567;rank=2 chr5 . exon 1452156 1452972 . + . ID=Thaps262567.2;Parent=Thaps262567;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1453046 1454140 . - . ID=Thaps5538;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C369];external_name=Thaps5538;logic_name=jgi_thaps3 chr5 ensembl transcript 1453046 1454140 . - . ID=Thaps5538;Parent=Thaps5538;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1453046 1454140 . - 0 ID=Thaps5538;Parent=Thaps5538;rank=1 chr5 . exon 1453046 1454140 . - . ID=Thaps5538.1;Parent=Thaps5538;constitutive=1;rank=1 chr5 . exon 1458134 1458417 . + . ID=Thaps22799.5;Parent=Thaps22799;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . exon 1458499 1458629 . + . ID=Thaps22799.6;Parent=Thaps22799;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . exon 1458708 1458748 . + . ID=Thaps22799.7;Parent=Thaps22799;constitutive=1;ensembl_end_phase=2;rank=7 chr5 ensembl protein_coding_gene 1459966 1460769 . - . ID=Thaps22801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C372];external_name=Thaps22801;logic_name=jgi_thaps3 chr5 ensembl transcript 1459966 1460769 . - . ID=Thaps22801;Parent=Thaps22801;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1459966 1460769 . - 0 ID=Thaps22801;Parent=Thaps22801;rank=1 chr5 . exon 1459966 1460769 . - . ID=Thaps22801.1;Parent=Thaps22801;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1461000 1463871 . - . ID=Thaps262568;biotype=protein_coding;description=Transitional endoplasmic reticulum [Source:UniProtKB/TrEMBL%3BAcc:B8C373];external_name=Thaps262568;logic_name=jgi_thaps3 chr5 ensembl transcript 1461000 1463871 . - . ID=Thaps262568;Parent=Thaps262568;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1461000 1461336 . - 0 ID=Thaps262568;Parent=Thaps262568;rank=6 chr5 . exon 1461000 1461336 . - . ID=Thaps262568.6;Parent=Thaps262568;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 1461423 1461720 . - 0 ID=Thaps262568;Parent=Thaps262568;rank=5 chr5 . exon 1461423 1461720 . - . ID=Thaps262568.5;Parent=Thaps262568;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1461794 1461996 . - 0 ID=Thaps262568;Parent=Thaps262568;rank=4 chr5 . exon 1461794 1461996 . - . ID=Thaps262568.4;Parent=Thaps262568;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1462082 1462736 . - 0 ID=Thaps262568;Parent=Thaps262568;rank=3 chr5 . exon 1462082 1462736 . - . ID=Thaps262568.3;Parent=Thaps262568;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1462828 1463283 . - 0 ID=Thaps262568;Parent=Thaps262568;rank=2 chr5 . exon 1462828 1463283 . - . ID=Thaps262568.2;Parent=Thaps262568;constitutive=1;rank=2 chr5 . CDS 1463365 1463871 . - 0 ID=Thaps262568;Parent=Thaps262568;rank=1 chr5 . exon 1463365 1463871 . - . ID=Thaps262568.1;Parent=Thaps262568;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1458782 1459819 . - . ID=Thaps5540;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C371];external_name=Thaps5540;logic_name=jgi_thaps3 chr5 ensembl transcript 1458782 1459819 . - . ID=Thaps5540;Parent=Thaps5540;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1458782 1459819 . - 0 ID=Thaps5540;Parent=Thaps5540;rank=1 chr5 . exon 1458782 1459819 . - . ID=Thaps5540.1;Parent=Thaps5540;constitutive=1;rank=1 chr5 . repeat_region 1477277 1477284 . ? . description=dust chr5 ensembl protein_coding_gene 1470961 1471221 . + . ID=Thaps262570;biotype=protein_coding;description=Intraflagellar transport protein [Source:UniProtKB/TrEMBL%3BAcc:B8C375];external_name=Thaps262570;logic_name=jgi_thaps3 chr5 ensembl transcript 1470961 1471221 . + . ID=Thaps262570;Parent=Thaps262570;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1470961 1471221 . + 0 ID=Thaps262570;Parent=Thaps262570;rank=1 chr5 . exon 1470961 1471221 . + . ID=Thaps262570.1;Parent=Thaps262570;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1468806 1469939 . + . ID=Thaps34403;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C374];external_name=Thaps34403;logic_name=jgi_thaps3 chr5 ensembl transcript 1468806 1469939 . + . ID=Thaps34403;Parent=Thaps34403;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1468806 1469541 . + 0 ID=Thaps34403;Parent=Thaps34403;rank=1 chr5 . exon 1468806 1469541 . + . ID=Thaps34403.1;Parent=Thaps34403;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1469632 1469939 . + 0 ID=Thaps34403;Parent=Thaps34403;rank=2 chr5 . exon 1469632 1469939 . + . ID=Thaps34403.2;Parent=Thaps34403;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . repeat_region 1484319 1484354 . ? . description=trf chr5 ensembl protein_coding_gene 1479836 1481141 . + . ID=Thaps22802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C378];external_name=Thaps22802;logic_name=jgi_thaps3 chr5 ensembl transcript 1479836 1481141 . + . ID=Thaps22802;Parent=Thaps22802;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1479836 1480138 . + 0 ID=Thaps22802;Parent=Thaps22802;rank=1 chr5 . exon 1479836 1480138 . + . ID=Thaps22802.1;Parent=Thaps22802;constitutive=1;rank=1 chr5 . CDS 1480203 1481141 . + 0 ID=Thaps22802;Parent=Thaps22802;rank=2 chr5 . exon 1480203 1481141 . + . ID=Thaps22802.2;Parent=Thaps22802;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1485398 1487185 . - . ID=Thaps22804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C381];external_name=DESA;logic_name=jgi_thaps3 chr5 ensembl transcript 1485398 1487185 . - . ID=Thaps22804;Parent=Thaps22804;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1485398 1485538 . - 0 ID=Thaps22804;Parent=Thaps22804;rank=4 chr5 . exon 1485398 1485538 . - . ID=Thaps22804.4;Parent=Thaps22804;constitutive=1;rank=4 chr5 . CDS 1485607 1485932 . - 0 ID=Thaps22804;Parent=Thaps22804;rank=3 chr5 . exon 1485607 1485932 . - . ID=Thaps22804.3;Parent=Thaps22804;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1486021 1486195 . - 0 ID=Thaps22804;Parent=Thaps22804;rank=2 chr5 . exon 1486021 1486195 . - . ID=Thaps22804.2;Parent=Thaps22804;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1486280 1487185 . - 0 ID=Thaps22804;Parent=Thaps22804;rank=1 chr5 . exon 1486280 1487185 . - . ID=Thaps22804.1;Parent=Thaps22804;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1477704 1478597 . + . ID=Thaps34283;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C376];external_name=Thaps34283;logic_name=jgi_thaps3 chr5 ensembl transcript 1477704 1478597 . + . ID=Thaps34283;Parent=Thaps34283;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1477704 1478597 . + 0 ID=Thaps34283;Parent=Thaps34283;rank=1 chr5 . exon 1477704 1478597 . + . ID=Thaps34283.1;Parent=Thaps34283;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1482046 1482525 . - . ID=Thaps34412;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C379];external_name=Thaps34412;logic_name=jgi_thaps3 chr5 ensembl transcript 1482046 1482525 . - . ID=Thaps34412;Parent=Thaps34412;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1482046 1482257 . - 0 ID=Thaps34412;Parent=Thaps34412;rank=2 chr5 . exon 1482046 1482257 . - . ID=Thaps34412.2;Parent=Thaps34412;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1482315 1482525 . - 0 ID=Thaps34412;Parent=Thaps34412;rank=1 chr5 . exon 1482315 1482525 . - . ID=Thaps34412.1;Parent=Thaps34412;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1478822 1479535 . - . ID=Thaps5545;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C377];external_name=Thaps5545;logic_name=jgi_thaps3 chr5 ensembl transcript 1478822 1479535 . - . ID=Thaps5545;Parent=Thaps5545;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1478822 1479535 . - 0 ID=Thaps5545;Parent=Thaps5545;rank=1 chr5 . exon 1478822 1479535 . - . ID=Thaps5545.1;Parent=Thaps5545;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1484747 1485175 . + . ID=Thaps5548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C380];external_name=Thaps5548;logic_name=jgi_thaps3 chr5 ensembl transcript 1484747 1485175 . + . ID=Thaps5548;Parent=Thaps5548;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1484747 1485175 . + 0 ID=Thaps5548;Parent=Thaps5548;rank=1 chr5 . exon 1484747 1485175 . + . ID=Thaps5548.1;Parent=Thaps5548;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1487352 1488175 . - . ID=Thaps5551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C382];external_name=Thaps5551;logic_name=jgi_thaps3 chr5 ensembl transcript 1487352 1488175 . - . ID=Thaps5551;Parent=Thaps5551;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1487352 1487378 . - 0 ID=Thaps5551;Parent=Thaps5551;rank=2 chr5 . exon 1487352 1487378 . - . ID=Thaps5551.2;Parent=Thaps5551;constitutive=1;rank=2 chr5 . CDS 1487447 1488175 . - 0 ID=Thaps5551;Parent=Thaps5551;rank=1 chr5 . exon 1487447 1488175 . - . ID=Thaps5551.1;Parent=Thaps5551;constitutive=1;rank=1 chr5 . biological_region 1490382 1490384 0.999 + . logic_name=eponine chr5 . repeat_region 1493905 1493939 . ? . description=dust chr5 ensembl protein_coding_gene 1492173 1493481 . - . ID=Thaps262572;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C385];external_name=Thaps262572;logic_name=jgi_thaps3 chr5 ensembl transcript 1492173 1493481 . - . ID=Thaps262572;Parent=Thaps262572;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1492173 1492853 . - 0 ID=Thaps262572;Parent=Thaps262572;rank=4 chr5 . exon 1492173 1492853 . - . ID=Thaps262572.4;Parent=Thaps262572;constitutive=1;rank=4 chr5 . CDS 1492884 1493007 . - 0 ID=Thaps262572;Parent=Thaps262572;rank=3 chr5 . exon 1492884 1493007 . - . ID=Thaps262572.3;Parent=Thaps262572;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1493056 1493151 . - 0 ID=Thaps262572;Parent=Thaps262572;rank=2 chr5 . exon 1493056 1493151 . - . ID=Thaps262572.2;Parent=Thaps262572;constitutive=1;rank=2 chr5 . CDS 1493191 1493481 . - 0 ID=Thaps262572;Parent=Thaps262572;rank=1 chr5 . exon 1493191 1493481 . - . ID=Thaps262572.1;Parent=Thaps262572;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1493866 1496400 . + . ID=Thaps262573;biotype=protein_coding;description=Gamma-glutamyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C386];external_name=Thaps262573;logic_name=jgi_thaps3 chr5 ensembl transcript 1493866 1496400 . + . ID=Thaps262573;Parent=Thaps262573;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1493866 1493959 . + 0 ID=Thaps262573;Parent=Thaps262573;rank=1 chr5 . exon 1493866 1493959 . + . ID=Thaps262573.1;Parent=Thaps262573;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1494438 1494613 . + 0 ID=Thaps262573;Parent=Thaps262573;rank=2 chr5 . exon 1494438 1494613 . + . ID=Thaps262573.2;Parent=Thaps262573;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1494671 1495204 . + 0 ID=Thaps262573;Parent=Thaps262573;rank=3 chr5 . exon 1494671 1495204 . + . ID=Thaps262573.3;Parent=Thaps262573;constitutive=1;rank=3 chr5 . CDS 1495288 1495654 . + 0 ID=Thaps262573;Parent=Thaps262573;rank=4 chr5 . exon 1495288 1495654 . + . ID=Thaps262573.4;Parent=Thaps262573;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1495769 1496209 . + 0 ID=Thaps262573;Parent=Thaps262573;rank=5 chr5 . exon 1495769 1496209 . + . ID=Thaps262573.5;Parent=Thaps262573;constitutive=1;rank=5 chr5 . CDS 1496249 1496400 . + 0 ID=Thaps262573;Parent=Thaps262573;rank=6 chr5 . exon 1496249 1496400 . + . ID=Thaps262573.6;Parent=Thaps262573;constitutive=1;ensembl_end_phase=2;rank=6 chr5 ensembl protein_coding_gene 1488825 1489928 . + . ID=Thaps5552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C383];external_name=Thaps5552;logic_name=jgi_thaps3 chr5 ensembl transcript 1488825 1489928 . + . ID=Thaps5552;Parent=Thaps5552;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1488825 1489928 . + 0 ID=Thaps5552;Parent=Thaps5552;rank=1 chr5 . exon 1488825 1489928 . + . ID=Thaps5552.1;Parent=Thaps5552;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1490358 1492046 . + . ID=Thaps5553;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C384];external_name=Thaps5553;logic_name=jgi_thaps3 chr5 ensembl transcript 1490358 1492046 . + . ID=Thaps5553;Parent=Thaps5553;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1490358 1492046 . + 0 ID=Thaps5553;Parent=Thaps5553;rank=1 chr5 . exon 1490358 1492046 . + . ID=Thaps5553.1;Parent=Thaps5553;constitutive=1;rank=1 chr5 . repeat_region 1499838 1499876 . ? . description=trf chr5 ensembl protein_coding_gene 1505017 1509384 . + . ID=Thaps22807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C390];external_name=Thaps22807;logic_name=jgi_thaps3 chr5 ensembl transcript 1505017 1509384 . + . ID=Thaps22807;Parent=Thaps22807;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1505017 1505165 . + 0 ID=Thaps22807;Parent=Thaps22807;rank=1 chr5 . exon 1505017 1505165 . + . ID=Thaps22807.1;Parent=Thaps22807;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1505299 1506189 . + 0 ID=Thaps22807;Parent=Thaps22807;rank=2 chr5 . exon 1505299 1506189 . + . ID=Thaps22807.2;Parent=Thaps22807;constitutive=1;rank=2 chr5 . CDS 1506494 1507527 . + 0 ID=Thaps22807;Parent=Thaps22807;rank=3 chr5 . exon 1506494 1507527 . + . ID=Thaps22807.3;Parent=Thaps22807;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1507874 1509384 . + 0 ID=Thaps22807;Parent=Thaps22807;rank=4 chr5 ensembl protein_coding_gene 1498836 1501607 . - . ID=Thaps262574;biotype=protein_coding;description=Structure specific recognition protein 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C388];external_name=SSRP1;logic_name=jgi_thaps3 chr5 ensembl transcript 1498836 1501607 . - . ID=Thaps262574;Parent=Thaps262574;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1498836 1499123 . - 0 ID=Thaps262574;Parent=Thaps262574;rank=7 chr5 . exon 1498836 1499123 . - . ID=Thaps262574.7;Parent=Thaps262574;constitutive=1;rank=7 chr5 . CDS 1499209 1499295 . - 0 ID=Thaps262574;Parent=Thaps262574;rank=6 chr5 . exon 1499209 1499295 . - . ID=Thaps262574.6;Parent=Thaps262574;constitutive=1;rank=6 chr5 . CDS 1499388 1499702 . - 0 ID=Thaps262574;Parent=Thaps262574;rank=5 chr5 . exon 1499388 1499702 . - . ID=Thaps262574.5;Parent=Thaps262574;constitutive=1;rank=5 chr5 . CDS 1499781 1500378 . - 0 ID=Thaps262574;Parent=Thaps262574;rank=4 chr5 . exon 1499781 1500378 . - . ID=Thaps262574.4;Parent=Thaps262574;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1500460 1500689 . - 0 ID=Thaps262574;Parent=Thaps262574;rank=3 chr5 . exon 1500460 1500689 . - . ID=Thaps262574.3;Parent=Thaps262574;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1500780 1501268 . - 0 ID=Thaps262574;Parent=Thaps262574;rank=2 chr5 . exon 1500780 1501268 . - . ID=Thaps262574.2;Parent=Thaps262574;constitutive=1;rank=2 chr5 . CDS 1501317 1501607 . - 0 ID=Thaps262574;Parent=Thaps262574;rank=1 chr5 . exon 1501317 1501607 . - . ID=Thaps262574.1;Parent=Thaps262574;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1497815 1498606 . + . ID=Thaps5555;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C387];external_name=Thaps5555;logic_name=jgi_thaps3 chr5 ensembl transcript 1497815 1498606 . + . ID=Thaps5555;Parent=Thaps5555;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1497815 1498606 . + 0 ID=Thaps5555;Parent=Thaps5555;rank=1 chr5 . exon 1497815 1498606 . + . ID=Thaps5555.1;Parent=Thaps5555;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1502676 1504764 . - . ID=Thaps5557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C389];external_name=Thaps5557;logic_name=jgi_thaps3 chr5 ensembl transcript 1502676 1504764 . - . ID=Thaps5557;Parent=Thaps5557;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1502676 1502722 . - 0 ID=Thaps5557;Parent=Thaps5557;rank=5 chr5 . exon 1502676 1502722 . - . ID=Thaps5557.5;Parent=Thaps5557;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 1502768 1503814 . - 0 ID=Thaps5557;Parent=Thaps5557;rank=4 chr5 . exon 1502768 1503814 . - . ID=Thaps5557.4;Parent=Thaps5557;constitutive=1;rank=4 chr5 . CDS 1503908 1504062 . - 0 ID=Thaps5557;Parent=Thaps5557;rank=3 chr5 . exon 1503908 1504062 . - . ID=Thaps5557.3;Parent=Thaps5557;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1504142 1504307 . - 0 ID=Thaps5557;Parent=Thaps5557;rank=2 chr5 . exon 1504142 1504307 . - . ID=Thaps5557.2;Parent=Thaps5557;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1504332 1504764 . - 0 ID=Thaps5557;Parent=Thaps5557;rank=1 chr5 . exon 1504332 1504764 . - . ID=Thaps5557.1;Parent=Thaps5557;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 1508021 1508029 . ? . description=dust chr5 . exon 1507874 1509384 . + . ID=Thaps22807.4;Parent=Thaps22807;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 1511498 1517595 . - . ID=Thaps22808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C392];external_name=Thaps22808;logic_name=jgi_thaps3 chr5 ensembl transcript 1511498 1517595 . - . ID=Thaps22808;Parent=Thaps22808;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1511498 1512641 . - 0 ID=Thaps22808;Parent=Thaps22808;rank=4 chr5 . exon 1511498 1512641 . - . ID=Thaps22808.4;Parent=Thaps22808;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1512721 1513728 . - 0 ID=Thaps22808;Parent=Thaps22808;rank=3 chr5 . exon 1512721 1513728 . - . ID=Thaps22808.3;Parent=Thaps22808;constitutive=1;rank=3 chr5 . CDS 1513807 1516131 . - 0 ID=Thaps22808;Parent=Thaps22808;rank=2 chr5 . exon 1513807 1516131 . - . ID=Thaps22808.2;Parent=Thaps22808;constitutive=1;rank=2 chr5 . CDS 1516229 1517595 . - 0 ID=Thaps22808;Parent=Thaps22808;rank=1 chr5 . exon 1516229 1517595 . - . ID=Thaps22808.1;Parent=Thaps22808;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1510662 1510853 . + . ID=Thaps34476;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C391];external_name=Thaps34476;logic_name=jgi_thaps3 chr5 ensembl transcript 1510662 1510853 . + . ID=Thaps34476;Parent=Thaps34476;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1510662 1510853 . + 0 ID=Thaps34476;Parent=Thaps34476;rank=1 chr5 . exon 1510662 1510853 . + . ID=Thaps34476.1;Parent=Thaps34476;constitutive=1;rank=1 chr5 . repeat_region 1521960 1521983 . ? . description=trf chr5 ensembl protein_coding_gene 1523477 1524742 . - . ID=Thaps15138;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C394];external_name=Thaps15138;logic_name=jgi_thaps3 chr5 ensembl transcript 1523477 1524742 . - . ID=Thaps15138;Parent=Thaps15138;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1523477 1524447 . - 0 ID=Thaps15138;Parent=Thaps15138;rank=2 chr5 . exon 1523477 1524447 . - . ID=Thaps15138.2;Parent=Thaps15138;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1524583 1524742 . - 0 ID=Thaps15138;Parent=Thaps15138;rank=1 chr5 . exon 1524583 1524742 . - . ID=Thaps15138.1;Parent=Thaps15138;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1519015 1522235 . - . ID=Thaps22809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C393];external_name=Thaps22809;logic_name=jgi_thaps3 chr5 ensembl transcript 1519015 1522235 . - . ID=Thaps22809;Parent=Thaps22809;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1519015 1519961 . - 0 ID=Thaps22809;Parent=Thaps22809;rank=3 chr5 . exon 1519015 1519961 . - . ID=Thaps22809.3;Parent=Thaps22809;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1520034 1520680 . - 0 ID=Thaps22809;Parent=Thaps22809;rank=2 chr5 . exon 1520034 1520680 . - . ID=Thaps22809.2;Parent=Thaps22809;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1520824 1522235 . - 0 ID=Thaps22809;Parent=Thaps22809;rank=1 chr5 . exon 1520824 1522235 . - . ID=Thaps22809.1;Parent=Thaps22809;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1526402 1528045 . - . ID=Thaps22810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C396];external_name=Thaps22810;logic_name=jgi_thaps3 chr5 ensembl transcript 1526402 1528045 . - . ID=Thaps22810;Parent=Thaps22810;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1526402 1528045 . - 0 ID=Thaps22810;Parent=Thaps22810;rank=1 chr5 . exon 1526402 1528045 . - . ID=Thaps22810.1;Parent=Thaps22810;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1525541 1526175 . + . ID=Thaps5563;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C395];external_name=Thaps5563;logic_name=jgi_thaps3 chr5 ensembl transcript 1525541 1526175 . + . ID=Thaps5563;Parent=Thaps5563;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1525541 1526013 . + 0 ID=Thaps5563;Parent=Thaps5563;rank=1 chr5 . exon 1525541 1526013 . + . ID=Thaps5563.1;Parent=Thaps5563;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1526157 1526175 . + 0 ID=Thaps5563;Parent=Thaps5563;rank=2 chr5 . exon 1526157 1526175 . + . ID=Thaps5563.2;Parent=Thaps5563;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1528365 1530696 . + . ID=Thaps22811;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C397];external_name=Thaps22811;logic_name=jgi_thaps3 chr5 ensembl transcript 1528365 1530696 . + . ID=Thaps22811;Parent=Thaps22811;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1528365 1529516 . + 0 ID=Thaps22811;Parent=Thaps22811;rank=1 chr5 . exon 1528365 1529516 . + . ID=Thaps22811.1;Parent=Thaps22811;constitutive=1;rank=1 chr5 . CDS 1529626 1529682 . + 0 ID=Thaps22811;Parent=Thaps22811;rank=2 chr5 . exon 1529626 1529682 . + . ID=Thaps22811.2;Parent=Thaps22811;constitutive=1;rank=2 chr5 . CDS 1529761 1529808 . + 0 ID=Thaps22811;Parent=Thaps22811;rank=3 chr5 . exon 1529761 1529808 . + . ID=Thaps22811.3;Parent=Thaps22811;constitutive=1;rank=3 chr5 . CDS 1529886 1530080 . + 0 ID=Thaps22811;Parent=Thaps22811;rank=4 chr5 . exon 1529886 1530080 . + . ID=Thaps22811.4;Parent=Thaps22811;constitutive=1;rank=4 chr5 . CDS 1530166 1530696 . + 0 ID=Thaps22811;Parent=Thaps22811;rank=5 chr5 . exon 1530166 1530696 . + . ID=Thaps22811.5;Parent=Thaps22811;constitutive=1;rank=5 chr5 ensembl protein_coding_gene 1531141 1532262 . - . ID=Thaps262575;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C398];external_name=Thaps262575;logic_name=jgi_thaps3 chr5 ensembl transcript 1531141 1532262 . - . ID=Thaps262575;Parent=Thaps262575;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1531141 1531688 . - 0 ID=Thaps262575;Parent=Thaps262575;rank=3 chr5 . exon 1531141 1531688 . - . ID=Thaps262575.3;Parent=Thaps262575;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1531762 1532021 . - 0 ID=Thaps262575;Parent=Thaps262575;rank=2 chr5 . exon 1531762 1532021 . - . ID=Thaps262575.2;Parent=Thaps262575;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1532096 1532262 . - 0 ID=Thaps262575;Parent=Thaps262575;rank=1 chr5 . exon 1532096 1532262 . - . ID=Thaps262575.1;Parent=Thaps262575;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1534577 1536396 . + . ID=Thaps34498;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C399];external_name=Thaps34498;logic_name=jgi_thaps3 chr5 ensembl transcript 1534577 1536396 . + . ID=Thaps34498;Parent=Thaps34498;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1534577 1534600 . + 0 ID=Thaps34498;Parent=Thaps34498;rank=1 chr5 . exon 1534577 1534600 . + . ID=Thaps34498.1;Parent=Thaps34498;constitutive=1;rank=1 chr5 . CDS 1536082 1536396 . + 0 ID=Thaps34498;Parent=Thaps34498;rank=2 chr5 . exon 1536082 1536396 . + . ID=Thaps34498.2;Parent=Thaps34498;constitutive=1;rank=2 chr5 . biological_region 1542052 1542055 0.999 + . logic_name=eponine chr5 . biological_region 1542118 1542120 0.999 + . logic_name=eponine chr5 . biological_region 1542131 1542135 0.999 - . logic_name=eponine chr5 . repeat_region 1542926 1542935 . ? . description=dust chr5 ensembl protein_coding_gene 1543418 1543789 . - . ID=Thaps19435;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3A2];external_name=Thaps19435;logic_name=jgi_thaps3 chr5 ensembl transcript 1543418 1543789 . - . ID=Thaps19435;Parent=Thaps19435;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1543418 1543789 . - 0 ID=Thaps19435;Parent=Thaps19435;rank=1 chr5 . exon 1543418 1543789 . - . ID=Thaps19435.1;Parent=Thaps19435;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1539879 1541291 . + . ID=Thaps34303;biotype=protein_coding;description=Translation elongation factor-1-alpha [Source:UniProtKB/TrEMBL%3BAcc:B8C3A0];external_name=Thaps34303;logic_name=jgi_thaps3 chr5 ensembl transcript 1539879 1541291 . + . ID=Thaps34303;Parent=Thaps34303;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1539879 1541291 . + 0 ID=Thaps34303;Parent=Thaps34303;rank=1 chr5 . exon 1539879 1541291 . + . ID=Thaps34303.1;Parent=Thaps34303;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1541955 1542905 . + . ID=Thaps40788;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3A1];external_name=Thaps40788;logic_name=jgi_thaps3 chr5 ensembl transcript 1541955 1542905 . + . ID=Thaps40788;Parent=Thaps40788;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1541955 1542905 . + 0 ID=Thaps40788;Parent=Thaps40788;rank=1 chr5 . exon 1541955 1542905 . + . ID=Thaps40788.1;Parent=Thaps40788;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1546355 1547209 . + . ID=Thaps5573;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3A3];external_name=Thaps5573;logic_name=jgi_thaps3 chr5 ensembl transcript 1546355 1547209 . + . ID=Thaps5573;Parent=Thaps5573;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1546355 1547209 . + 0 ID=Thaps5573;Parent=Thaps5573;rank=1 chr5 . exon 1546355 1547209 . + . ID=Thaps5573.1;Parent=Thaps5573;constitutive=1;rank=1 chr5 . repeat_region 1553619 1553655 . ? . description=trf chr5 ensembl protein_coding_gene 1553747 1555031 . + . ID=Thaps22816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3A5];external_name=Thaps22816;logic_name=jgi_thaps3 chr5 ensembl transcript 1553747 1555031 . + . ID=Thaps22816;Parent=Thaps22816;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1553747 1554044 . + 0 ID=Thaps22816;Parent=Thaps22816;rank=1 chr5 . exon 1553747 1554044 . + . ID=Thaps22816.1;Parent=Thaps22816;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1554187 1555031 . + 0 ID=Thaps22816;Parent=Thaps22816;rank=2 chr5 . exon 1554187 1555031 . + . ID=Thaps22816.2;Parent=Thaps22816;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1556727 1558127 . + . ID=Thaps34077;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3A7];external_name=Thaps34077;logic_name=jgi_thaps3 chr5 ensembl transcript 1556727 1558127 . + . ID=Thaps34077;Parent=Thaps34077;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1556727 1556937 . + 0 ID=Thaps34077;Parent=Thaps34077;rank=1 chr5 . exon 1556727 1556937 . + . ID=Thaps34077.1;Parent=Thaps34077;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1557295 1557539 . + 0 ID=Thaps34077;Parent=Thaps34077;rank=2 chr5 . exon 1557295 1557539 . + . ID=Thaps34077.2;Parent=Thaps34077;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1557621 1558127 . + 0 ID=Thaps34077;Parent=Thaps34077;rank=3 chr5 ensembl protein_coding_gene 1547780 1553454 . - . ID=Thaps5574;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3A4];external_name=Thaps5574;logic_name=jgi_thaps3 chr5 ensembl transcript 1547780 1553454 . - . ID=Thaps5574;Parent=Thaps5574;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1547780 1548300 . - 0 ID=Thaps5574;Parent=Thaps5574;rank=7 chr5 . exon 1547780 1548300 . - . ID=Thaps5574.7;Parent=Thaps5574;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 1548529 1551792 . - 0 ID=Thaps5574;Parent=Thaps5574;rank=6 chr5 . exon 1548529 1551792 . - . ID=Thaps5574.6;Parent=Thaps5574;constitutive=1;rank=6 chr5 . CDS 1552020 1552283 . - 0 ID=Thaps5574;Parent=Thaps5574;rank=5 chr5 . exon 1552020 1552283 . - . ID=Thaps5574.5;Parent=Thaps5574;constitutive=1;rank=5 chr5 . CDS 1552306 1552579 . - 0 ID=Thaps5574;Parent=Thaps5574;rank=4 chr5 . exon 1552306 1552579 . - . ID=Thaps5574.4;Parent=Thaps5574;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1552660 1552764 . - 0 ID=Thaps5574;Parent=Thaps5574;rank=3 chr5 . exon 1552660 1552764 . - . ID=Thaps5574.3;Parent=Thaps5574;constitutive=1;rank=3 chr5 . CDS 1552849 1553106 . - 0 ID=Thaps5574;Parent=Thaps5574;rank=2 chr5 . exon 1552849 1553106 . - . ID=Thaps5574.2;Parent=Thaps5574;constitutive=1;rank=2 chr5 . CDS 1553209 1553454 . - 0 ID=Thaps5574;Parent=Thaps5574;rank=1 chr5 . exon 1553209 1553454 . - . ID=Thaps5574.1;Parent=Thaps5574;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1555330 1555938 . - . ID=Thaps5576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3A6];external_name=Thaps5576;logic_name=jgi_thaps3 chr5 ensembl transcript 1555330 1555938 . - . ID=Thaps5576;Parent=Thaps5576;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1555330 1555938 . - 0 ID=Thaps5576;Parent=Thaps5576;rank=1 chr5 . exon 1555330 1555938 . - . ID=Thaps5576.1;Parent=Thaps5576;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1565520 1566037 . - . ID=Thaps262580;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B0];external_name=Thaps262580;logic_name=jgi_thaps3 chr5 ensembl transcript 1565520 1566037 . - . ID=Thaps262580;Parent=Thaps262580;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1565520 1565679 . - 0 ID=Thaps262580;Parent=Thaps262580;rank=3 chr5 . exon 1565520 1565679 . - . ID=Thaps262580.3;Parent=Thaps262580;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1565704 1565771 . - 0 ID=Thaps262580;Parent=Thaps262580;rank=2 chr5 . exon 1565704 1565771 . - . ID=Thaps262580.2;Parent=Thaps262580;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1565799 1566037 . - 0 ID=Thaps262580;Parent=Thaps262580;rank=1 chr5 . exon 1565799 1566037 . - . ID=Thaps262580.1;Parent=Thaps262580;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 1557621 1558127 . + . ID=Thaps34077.3;Parent=Thaps34077;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 1566407 1566646 . - . ID=Thaps34233;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B1];external_name=Thaps34233;logic_name=jgi_thaps3 chr5 ensembl transcript 1566407 1566646 . - . ID=Thaps34233;Parent=Thaps34233;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1566407 1566646 . - 0 ID=Thaps34233;Parent=Thaps34233;rank=1 chr5 . exon 1566407 1566646 . - . ID=Thaps34233.1;Parent=Thaps34233;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1560698 1561417 . - . ID=Thaps5579;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3A8];external_name=Thaps5579;logic_name=jgi_thaps3 chr5 ensembl transcript 1560698 1561417 . - . ID=Thaps5579;Parent=Thaps5579;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1560698 1561417 . - 0 ID=Thaps5579;Parent=Thaps5579;rank=1 chr5 . exon 1560698 1561417 . - . ID=Thaps5579.1;Parent=Thaps5579;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1562093 1563767 . + . ID=Thaps5580;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3A9];external_name=Thaps5580;logic_name=jgi_thaps3 chr5 ensembl transcript 1562093 1563767 . + . ID=Thaps5580;Parent=Thaps5580;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1562093 1562482 . + 0 ID=Thaps5580;Parent=Thaps5580;rank=1 chr5 . exon 1562093 1562482 . + . ID=Thaps5580.1;Parent=Thaps5580;constitutive=1;rank=1 chr5 . CDS 1562599 1562639 . + 0 ID=Thaps5580;Parent=Thaps5580;rank=2 chr5 . exon 1562599 1562639 . + . ID=Thaps5580.2;Parent=Thaps5580;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1562747 1563767 . + 0 ID=Thaps5580;Parent=Thaps5580;rank=3 chr5 . exon 1562747 1563767 . + . ID=Thaps5580.3;Parent=Thaps5580;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . repeat_region 1569967 1570026 . ? . description=trf chr5 . repeat_region 1571158 1571198 . ? . description=trf chr5 ensembl protein_coding_gene 1568453 1570183 . - . ID=Thaps22820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B3];external_name=Thaps22820;logic_name=jgi_thaps3 chr5 ensembl transcript 1568453 1570183 . - . ID=Thaps22820;Parent=Thaps22820;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1568453 1568854 . - 0 ID=Thaps22820;Parent=Thaps22820;rank=4 chr5 . exon 1568453 1568854 . - . ID=Thaps22820.4;Parent=Thaps22820;constitutive=1;rank=4 chr5 . CDS 1568933 1568981 . - 0 ID=Thaps22820;Parent=Thaps22820;rank=3 chr5 . exon 1568933 1568981 . - . ID=Thaps22820.3;Parent=Thaps22820;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1569069 1569929 . - 0 ID=Thaps22820;Parent=Thaps22820;rank=2 chr5 . exon 1569069 1569929 . - . ID=Thaps22820.2;Parent=Thaps22820;constitutive=1;rank=2 chr5 . CDS 1570038 1570183 . - 0 ID=Thaps22820;Parent=Thaps22820;rank=1 chr5 . exon 1570038 1570183 . - . ID=Thaps22820.1;Parent=Thaps22820;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1576936 1580432 . + . ID=Thaps22821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B7];external_name=Thaps22821;logic_name=jgi_thaps3 chr5 ensembl transcript 1576936 1580432 . + . ID=Thaps22821;Parent=Thaps22821;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1576936 1577872 . + 0 ID=Thaps22821;Parent=Thaps22821;rank=1 chr5 . exon 1576936 1577872 . + . ID=Thaps22821.1;Parent=Thaps22821;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1577896 1580432 . + 0 ID=Thaps22821;Parent=Thaps22821;rank=2 chr5 ensembl protein_coding_gene 1567735 1568295 . + . ID=Thaps5582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B2];external_name=Thaps5582;logic_name=jgi_thaps3 chr5 ensembl transcript 1567735 1568295 . + . ID=Thaps5582;Parent=Thaps5582;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1567735 1568295 . + 0 ID=Thaps5582;Parent=Thaps5582;rank=1 chr5 . exon 1567735 1568295 . + . ID=Thaps5582.1;Parent=Thaps5582;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1570332 1571998 . + . ID=Thaps5584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B4];external_name=Thaps5584;logic_name=jgi_thaps3 chr5 ensembl transcript 1570332 1571998 . + . ID=Thaps5584;Parent=Thaps5584;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1570332 1570507 . + 0 ID=Thaps5584;Parent=Thaps5584;rank=1 chr5 . exon 1570332 1570507 . + . ID=Thaps5584.1;Parent=Thaps5584;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1570723 1571998 . + 0 ID=Thaps5584;Parent=Thaps5584;rank=2 chr5 . exon 1570723 1571998 . + . ID=Thaps5584.2;Parent=Thaps5584;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1572151 1573639 . - . ID=Thaps5585;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B5];external_name=Thaps5585;logic_name=jgi_thaps3 chr5 ensembl transcript 1572151 1573639 . - . ID=Thaps5585;Parent=Thaps5585;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1572151 1572202 . - 0 ID=Thaps5585;Parent=Thaps5585;rank=4 chr5 . exon 1572151 1572202 . - . ID=Thaps5585.4;Parent=Thaps5585;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1572241 1572927 . - 0 ID=Thaps5585;Parent=Thaps5585;rank=3 chr5 . exon 1572241 1572927 . - . ID=Thaps5585.3;Parent=Thaps5585;constitutive=1;rank=3 chr5 . CDS 1573066 1573186 . - 0 ID=Thaps5585;Parent=Thaps5585;rank=2 chr5 . exon 1573066 1573186 . - . ID=Thaps5585.2;Parent=Thaps5585;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1573270 1573639 . - 0 ID=Thaps5585;Parent=Thaps5585;rank=1 chr5 . exon 1573270 1573639 . - . ID=Thaps5585.1;Parent=Thaps5585;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1574459 1576520 . - . ID=Thaps5586;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B6];external_name=Thaps5586;logic_name=jgi_thaps3 chr5 ensembl transcript 1574459 1576520 . - . ID=Thaps5586;Parent=Thaps5586;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1574459 1575438 . - 0 ID=Thaps5586;Parent=Thaps5586;rank=2 chr5 . exon 1574459 1575438 . - . ID=Thaps5586.2;Parent=Thaps5586;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1575515 1576520 . - 0 ID=Thaps5586;Parent=Thaps5586;rank=1 chr5 . exon 1575515 1576520 . - . ID=Thaps5586.1;Parent=Thaps5586;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . biological_region 1581910 1581913 0.999 + . logic_name=eponine chr5 . repeat_region 1583892 1583899 . ? . description=dust chr5 . repeat_region 1585005 1585034 . ? . description=dust chr5 . exon 1577896 1580432 . + . ID=Thaps22821.2;Parent=Thaps22821;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1585489 1586118 . + . ID=Thaps22822;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3C1];external_name=Thaps22822;logic_name=jgi_thaps3 chr5 ensembl transcript 1585489 1586118 . + . ID=Thaps22822;Parent=Thaps22822;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1585489 1585575 . + 0 ID=Thaps22822;Parent=Thaps22822;rank=1 chr5 . exon 1585489 1585575 . + . ID=Thaps22822.1;Parent=Thaps22822;constitutive=1;rank=1 chr5 . CDS 1585840 1586118 . + 0 ID=Thaps22822;Parent=Thaps22822;rank=2 chr5 . exon 1585840 1586118 . + . ID=Thaps22822.2;Parent=Thaps22822;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1586606 1588576 . - . ID=Thaps22823;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3C2];external_name=Thaps22823;logic_name=jgi_thaps3 chr5 ensembl transcript 1586606 1588576 . - . ID=Thaps22823;Parent=Thaps22823;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1586606 1588576 . - 0 ID=Thaps22823;Parent=Thaps22823;rank=1 chr5 . exon 1586606 1588576 . - . ID=Thaps22823.1;Parent=Thaps22823;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1581383 1581982 . - . ID=Thaps5588;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B8];external_name=Thaps5588;logic_name=jgi_thaps3 chr5 ensembl transcript 1581383 1581982 . - . ID=Thaps5588;Parent=Thaps5588;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1581383 1581982 . - 0 ID=Thaps5588;Parent=Thaps5588;rank=1 chr5 . exon 1581383 1581982 . - . ID=Thaps5588.1;Parent=Thaps5588;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1582216 1583792 . + . ID=Thaps5589;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3B9];external_name=Thaps5589;logic_name=jgi_thaps3 chr5 ensembl transcript 1582216 1583792 . + . ID=Thaps5589;Parent=Thaps5589;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1582216 1583239 . + 0 ID=Thaps5589;Parent=Thaps5589;rank=1 chr5 . exon 1582216 1583239 . + . ID=Thaps5589.1;Parent=Thaps5589;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1583344 1583792 . + 0 ID=Thaps5589;Parent=Thaps5589;rank=2 chr5 . exon 1583344 1583792 . + . ID=Thaps5589.2;Parent=Thaps5589;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1584027 1584992 . - . ID=Thaps5590;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3C0];external_name=Thaps5590;logic_name=jgi_thaps3 chr5 ensembl transcript 1584027 1584992 . - . ID=Thaps5590;Parent=Thaps5590;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1584027 1584992 . - 0 ID=Thaps5590;Parent=Thaps5590;rank=1 chr5 . exon 1584027 1584992 . - . ID=Thaps5590.1;Parent=Thaps5590;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1595604 1595793 . + . ID=Thaps262585;biotype=protein_coding;description=Polyamine oxidase [Source:UniProtKB/TrEMBL%3BAcc:B8C3C5];external_name=Thaps262585;logic_name=jgi_thaps3 chr5 ensembl transcript 1595604 1595793 . + . ID=Thaps262585;Parent=Thaps262585;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1595604 1595793 . + 0 ID=Thaps262585;Parent=Thaps262585;rank=1 chr5 . exon 1595604 1595793 . + . ID=Thaps262585.1;Parent=Thaps262585;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1590519 1591614 . - . ID=Thaps34043;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3C3];external_name=Thaps34043;logic_name=jgi_thaps3 chr5 ensembl transcript 1590519 1591614 . - . ID=Thaps34043;Parent=Thaps34043;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1590519 1590809 . - 0 ID=Thaps34043;Parent=Thaps34043;rank=3 chr5 . exon 1590519 1590809 . - . ID=Thaps34043.3;Parent=Thaps34043;constitutive=1;rank=3 chr5 . CDS 1590891 1590965 . - 0 ID=Thaps34043;Parent=Thaps34043;rank=2 chr5 . exon 1590891 1590965 . - . ID=Thaps34043.2;Parent=Thaps34043;constitutive=1;rank=2 chr5 . CDS 1591057 1591614 . - 0 ID=Thaps34043;Parent=Thaps34043;rank=1 chr5 . exon 1591057 1591614 . - . ID=Thaps34043.1;Parent=Thaps34043;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1591787 1592578 . - . ID=Thaps34442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3C4];external_name=Thaps34442;logic_name=jgi_thaps3 chr5 ensembl transcript 1591787 1592578 . - . ID=Thaps34442;Parent=Thaps34442;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1591787 1592578 . - 0 ID=Thaps34442;Parent=Thaps34442;rank=1 chr5 . exon 1591787 1592578 . - . ID=Thaps34442.1;Parent=Thaps34442;constitutive=1;rank=1 chr5 . repeat_region 1600108 1600121 . ? . description=dust chr5 ensembl protein_coding_gene 1607032 1610643 . + . ID=Thaps22826;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3C8];external_name=Thaps22826;logic_name=jgi_thaps3 chr5 ensembl transcript 1607032 1610643 . + . ID=Thaps22826;Parent=Thaps22826;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1607032 1610643 . + 0 ID=Thaps22826;Parent=Thaps22826;rank=1 chr5 . exon 1607032 1610643 . + . ID=Thaps22826.1;Parent=Thaps22826;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1604863 1606617 . - . ID=Thaps268929;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3C7];external_name=Thaps268929;logic_name=jgi_thaps3 chr5 ensembl transcript 1604863 1606617 . - . ID=Thaps268929;Parent=Thaps268929;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1604863 1605797 . - 0 ID=Thaps268929;Parent=Thaps268929;rank=4 chr5 . exon 1604863 1605797 . - . ID=Thaps268929.4;Parent=Thaps268929;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1605822 1606014 . - 0 ID=Thaps268929;Parent=Thaps268929;rank=3 chr5 . exon 1605822 1606014 . - . ID=Thaps268929.3;Parent=Thaps268929;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1606083 1606098 . - 0 ID=Thaps268929;Parent=Thaps268929;rank=2 chr5 . exon 1606083 1606098 . - . ID=Thaps268929.2;Parent=Thaps268929;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1606199 1606617 . - 0 ID=Thaps268929;Parent=Thaps268929;rank=1 chr5 . exon 1606199 1606617 . - . ID=Thaps268929.1;Parent=Thaps268929;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1600216 1604725 . + . ID=Thaps5595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3C6];external_name=Thaps5595;logic_name=jgi_thaps3 chr5 ensembl transcript 1600216 1604725 . + . ID=Thaps5595;Parent=Thaps5595;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1600216 1602153 . + 0 ID=Thaps5595;Parent=Thaps5595;rank=1 chr5 . exon 1600216 1602153 . + . ID=Thaps5595.1;Parent=Thaps5595;constitutive=1;rank=1 chr5 . CDS 1602239 1602428 . + 0 ID=Thaps5595;Parent=Thaps5595;rank=2 chr5 . exon 1602239 1602428 . + . ID=Thaps5595.2;Parent=Thaps5595;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1602509 1604171 . + 0 ID=Thaps5595;Parent=Thaps5595;rank=3 chr5 . exon 1602509 1604171 . + . ID=Thaps5595.3;Parent=Thaps5595;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1604278 1604725 . + 0 ID=Thaps5595;Parent=Thaps5595;rank=4 chr5 . exon 1604278 1604725 . + . ID=Thaps5595.4;Parent=Thaps5595;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 1615293 1615976 . + . ID=Thaps16295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3D2];external_name=Thaps16295;logic_name=jgi_thaps3 chr5 ensembl transcript 1615293 1615976 . + . ID=Thaps16295;Parent=Thaps16295;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1615293 1615976 . + 0 ID=Thaps16295;Parent=Thaps16295;rank=1 chr5 . exon 1615293 1615976 . + . ID=Thaps16295.1;Parent=Thaps16295;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1610917 1611359 . - . ID=Thaps262589;biotype=protein_coding;description=RM47%2C ribosomal protein 47 mitochondrial large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C3C9];external_name=RM47;logic_name=jgi_thaps3 chr5 ensembl transcript 1610917 1611359 . - . ID=Thaps262589;Parent=Thaps262589;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1610917 1611058 . - 0 ID=Thaps262589;Parent=Thaps262589;rank=2 chr5 . exon 1610917 1611058 . - . ID=Thaps262589.2;Parent=Thaps262589;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1611235 1611359 . - 0 ID=Thaps262589;Parent=Thaps262589;rank=1 chr5 . exon 1611235 1611359 . - . ID=Thaps262589.1;Parent=Thaps262589;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1611945 1613411 . + . ID=Thaps5599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3D0];external_name=Thaps5599;logic_name=jgi_thaps3 chr5 ensembl transcript 1611945 1613411 . + . ID=Thaps5599;Parent=Thaps5599;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1611945 1613411 . + 0 ID=Thaps5599;Parent=Thaps5599;rank=1 chr5 . exon 1611945 1613411 . + . ID=Thaps5599.1;Parent=Thaps5599;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1613506 1614070 . - . ID=Thaps5600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3D1];external_name=Thaps5600;logic_name=jgi_thaps3 chr5 ensembl transcript 1613506 1614070 . - . ID=Thaps5600;Parent=Thaps5600;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1613506 1613887 . - 0 ID=Thaps5600;Parent=Thaps5600;rank=2 chr5 . exon 1613506 1613887 . - . ID=Thaps5600.2;Parent=Thaps5600;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1613958 1614070 . - 0 ID=Thaps5600;Parent=Thaps5600;rank=1 chr5 . exon 1613958 1614070 . - . ID=Thaps5600.1;Parent=Thaps5600;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1616188 1617735 . - . ID=Thaps5602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3D3];external_name=Thaps5602;logic_name=jgi_thaps3 chr5 ensembl transcript 1616188 1617735 . - . ID=Thaps5602;Parent=Thaps5602;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1616188 1616561 . - 0 ID=Thaps5602;Parent=Thaps5602;rank=4 chr5 . exon 1616188 1616561 . - . ID=Thaps5602.4;Parent=Thaps5602;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1616647 1616808 . - 0 ID=Thaps5602;Parent=Thaps5602;rank=3 chr5 . exon 1616647 1616808 . - . ID=Thaps5602.3;Parent=Thaps5602;constitutive=1;rank=3 chr5 . CDS 1616892 1617129 . - 0 ID=Thaps5602;Parent=Thaps5602;rank=2 chr5 . exon 1616892 1617129 . - . ID=Thaps5602.2;Parent=Thaps5602;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1617319 1617735 . - 0 ID=Thaps5602;Parent=Thaps5602;rank=1 chr5 . repeat_region 1618639 1618675 . ? . description=trf chr5 ensembl protein_coding_gene 1625066 1626568 . + . ID=Thaps268931;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3D7];external_name=Thaps268931;logic_name=jgi_thaps3 chr5 ensembl transcript 1625066 1626568 . + . ID=Thaps268931;Parent=Thaps268931;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1625066 1626568 . + 0 ID=Thaps268931;Parent=Thaps268931;rank=1 chr5 . exon 1625066 1626568 . + . ID=Thaps268931.1;Parent=Thaps268931;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1618830 1619514 . - . ID=Thaps40798;biotype=protein_coding;description=Eukaryotic translation initiation factor 4E [Source:UniProtKB/TrEMBL%3BAcc:B8C3D4];external_name=Thaps40798;logic_name=jgi_thaps3 chr5 ensembl transcript 1618830 1619514 . - . ID=Thaps40798;Parent=Thaps40798;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1618830 1618879 . - 0 ID=Thaps40798;Parent=Thaps40798;rank=2 chr5 . exon 1618830 1618879 . - . ID=Thaps40798.2;Parent=Thaps40798;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1618992 1619514 . - 0 ID=Thaps40798;Parent=Thaps40798;rank=1 chr5 . exon 1618992 1619514 . - . ID=Thaps40798.1;Parent=Thaps40798;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . exon 1617319 1617735 . - . ID=Thaps5602.1;Parent=Thaps5602;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1619916 1622737 . + . ID=Thaps5604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3D5];external_name=Thaps5604;logic_name=jgi_thaps3 chr5 ensembl transcript 1619916 1622737 . + . ID=Thaps5604;Parent=Thaps5604;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1619916 1620612 . + 0 ID=Thaps5604;Parent=Thaps5604;rank=1 chr5 . exon 1619916 1620612 . + . ID=Thaps5604.1;Parent=Thaps5604;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1620717 1622737 . + 0 ID=Thaps5604;Parent=Thaps5604;rank=2 chr5 . exon 1620717 1622737 . + . ID=Thaps5604.2;Parent=Thaps5604;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1622882 1624102 . - . ID=Thaps5605;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3D6];external_name=Thaps5605;logic_name=jgi_thaps3 chr5 ensembl transcript 1622882 1624102 . - . ID=Thaps5605;Parent=Thaps5605;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1622882 1624102 . - 0 ID=Thaps5605;Parent=Thaps5605;rank=1 chr5 . exon 1622882 1624102 . - . ID=Thaps5605.1;Parent=Thaps5605;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1626908 1628930 . - . ID=Thaps5607;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3D8];external_name=Thaps5607;logic_name=jgi_thaps3 chr5 ensembl transcript 1626908 1628930 . - . ID=Thaps5607;Parent=Thaps5607;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1626908 1626953 . - 0 ID=Thaps5607;Parent=Thaps5607;rank=6 chr5 . exon 1626908 1626953 . - . ID=Thaps5607.6;Parent=Thaps5607;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 1627144 1627508 . - 0 ID=Thaps5607;Parent=Thaps5607;rank=5 chr5 . exon 1627144 1627508 . - . ID=Thaps5607.5;Parent=Thaps5607;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 1627579 1627794 . - 0 ID=Thaps5607;Parent=Thaps5607;rank=4 chr5 . CDS 1627866 1627955 . - 0 ID=Thaps5607;Parent=Thaps5607;rank=3 chr5 . CDS 1628034 1628507 . - 0 ID=Thaps5607;Parent=Thaps5607;rank=2 chr5 . CDS 1628595 1628930 . - 0 ID=Thaps5607;Parent=Thaps5607;rank=1 chr5 ensembl protein_coding_gene 1629195 1631203 . + . ID=Thaps22830;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3D9];external_name=Thaps22830;logic_name=jgi_thaps3 chr5 ensembl transcript 1629195 1631203 . + . ID=Thaps22830;Parent=Thaps22830;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1629195 1629891 . + 0 ID=Thaps22830;Parent=Thaps22830;rank=1 chr5 . exon 1629195 1629891 . + . ID=Thaps22830.1;Parent=Thaps22830;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1629911 1630326 . + 0 ID=Thaps22830;Parent=Thaps22830;rank=2 chr5 . exon 1629911 1630326 . + . ID=Thaps22830.2;Parent=Thaps22830;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1630459 1630940 . + 0 ID=Thaps22830;Parent=Thaps22830;rank=3 chr5 . exon 1630459 1630940 . + . ID=Thaps22830.3;Parent=Thaps22830;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1631020 1631203 . + 0 ID=Thaps22830;Parent=Thaps22830;rank=4 chr5 . exon 1631020 1631203 . + . ID=Thaps22830.4;Parent=Thaps22830;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 1632027 1633548 . - . ID=Thaps262593;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3E0];external_name=MTH1_2;logic_name=jgi_thaps3 chr5 ensembl transcript 1632027 1633548 . - . ID=Thaps262593;Parent=Thaps262593;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1632027 1633548 . - 0 ID=Thaps262593;Parent=Thaps262593;rank=1 chr5 . exon 1632027 1633548 . - . ID=Thaps262593.1;Parent=Thaps262593;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1633830 1634699 . + . ID=Thaps34559;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3E1];external_name=Thaps34559;logic_name=jgi_thaps3 chr5 ensembl transcript 1633830 1634699 . + . ID=Thaps34559;Parent=Thaps34559;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1633830 1634309 . + 0 ID=Thaps34559;Parent=Thaps34559;rank=1 chr5 . exon 1633830 1634309 . + . ID=Thaps34559.1;Parent=Thaps34559;constitutive=1;rank=1 chr5 . CDS 1634403 1634699 . + 0 ID=Thaps34559;Parent=Thaps34559;rank=2 chr5 . exon 1634403 1634699 . + . ID=Thaps34559.2;Parent=Thaps34559;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1636104 1637249 . + . ID=Thaps40801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3E2];external_name=Thaps40801;logic_name=jgi_thaps3 chr5 ensembl transcript 1636104 1637249 . + . ID=Thaps40801;Parent=Thaps40801;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1636104 1636256 . + 0 ID=Thaps40801;Parent=Thaps40801;rank=1 chr5 . exon 1636104 1636256 . + . ID=Thaps40801.1;Parent=Thaps40801;constitutive=1;rank=1 chr5 . CDS 1636356 1637066 . + 0 ID=Thaps40801;Parent=Thaps40801;rank=2 chr5 . exon 1636356 1637066 . + . ID=Thaps40801.2;Parent=Thaps40801;constitutive=1;rank=2 chr5 . CDS 1637157 1637249 . + 0 ID=Thaps40801;Parent=Thaps40801;rank=3 chr5 . exon 1637157 1637249 . + . ID=Thaps40801.3;Parent=Thaps40801;constitutive=1;rank=3 chr5 . exon 1627579 1627794 . - . ID=Thaps5607.4;Parent=Thaps5607;constitutive=1;rank=4 chr5 . exon 1627866 1627955 . - . ID=Thaps5607.3;Parent=Thaps5607;constitutive=1;rank=3 chr5 . exon 1628034 1628507 . - . ID=Thaps5607.2;Parent=Thaps5607;constitutive=1;rank=2 chr5 . exon 1628595 1628930 . - . ID=Thaps5607.1;Parent=Thaps5607;constitutive=1;rank=1 chr5 . repeat_region 1637822 1637924 . - . description=TE1A_TP chr5 . repeat_region 1639560 1639586 . ? . description=dust chr5 . repeat_region 1641520 1641580 . ? . description=dust chr5 ensembl protein_coding_gene 1638932 1639138 . + . ID=Thaps20285;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3E3];external_name=Thaps20285;logic_name=jgi_thaps3 chr5 ensembl transcript 1638932 1639138 . + . ID=Thaps20285;Parent=Thaps20285;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1638932 1639138 . + 0 ID=Thaps20285;Parent=Thaps20285;rank=1 chr5 . exon 1638932 1639138 . + . ID=Thaps20285.1;Parent=Thaps20285;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1643586 1643939 . - . ID=Thaps34266;biotype=protein_coding;description=RM17%2C ribosomal protein 17 mitochondrial large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C3E6];external_name=RM17;logic_name=jgi_thaps3 chr5 ensembl transcript 1643586 1643939 . - . ID=Thaps34266;Parent=Thaps34266;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1643586 1643939 . - 0 ID=Thaps34266;Parent=Thaps34266;rank=1 chr5 . exon 1643586 1643939 . - . ID=Thaps34266.1;Parent=Thaps34266;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1645539 1647208 . - . ID=Thaps34514;biotype=protein_coding;description=Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C3E7];external_name=Thaps34514;logic_name=jgi_thaps3 chr5 ensembl transcript 1645539 1647208 . - . ID=Thaps34514;Parent=Thaps34514;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1645539 1646254 . - 0 ID=Thaps34514;Parent=Thaps34514;rank=3 chr5 . exon 1645539 1646254 . - . ID=Thaps34514.3;Parent=Thaps34514;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1646352 1646433 . - 0 ID=Thaps34514;Parent=Thaps34514;rank=2 chr5 . exon 1646352 1646433 . - . ID=Thaps34514.2;Parent=Thaps34514;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1646516 1647208 . - 0 ID=Thaps34514;Parent=Thaps34514;rank=1 chr5 . exon 1646516 1647208 . - . ID=Thaps34514.1;Parent=Thaps34514;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1639418 1641418 . - . ID=Thaps5614;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3E4];external_name=Thaps5614;logic_name=jgi_thaps3 chr5 ensembl transcript 1639418 1641418 . - . ID=Thaps5614;Parent=Thaps5614;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1639418 1641418 . - 0 ID=Thaps5614;Parent=Thaps5614;rank=1 chr5 . exon 1639418 1641418 . - . ID=Thaps5614.1;Parent=Thaps5614;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1641719 1643299 . + . ID=Thaps5615;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3E5];external_name=Thaps5615;logic_name=jgi_thaps3 chr5 ensembl transcript 1641719 1643299 . + . ID=Thaps5615;Parent=Thaps5615;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1641719 1643299 . + 0 ID=Thaps5615;Parent=Thaps5615;rank=1 chr5 . exon 1641719 1643299 . + . ID=Thaps5615.1;Parent=Thaps5615;constitutive=1;rank=1 chr5 . repeat_region 1651041 1651087 . ? . description=trf chr5 . biological_region 1654032 1654033 0.999 - . logic_name=eponine chr5 ensembl protein_coding_gene 1647596 1648390 . - . ID=Thaps22835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3E8];external_name=Thaps22835;logic_name=jgi_thaps3 chr5 ensembl transcript 1647596 1648390 . - . ID=Thaps22835;Parent=Thaps22835;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1647596 1648390 . - 0 ID=Thaps22835;Parent=Thaps22835;rank=1 chr5 . exon 1647596 1648390 . - . ID=Thaps22835.1;Parent=Thaps22835;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1655274 1659798 . + . ID=Thaps22837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3F1];external_name=Thaps22837;logic_name=jgi_thaps3 chr5 ensembl transcript 1655274 1659798 . + . ID=Thaps22837;Parent=Thaps22837;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1655274 1656392 . + 0 ID=Thaps22837;Parent=Thaps22837;rank=1 chr5 . exon 1655274 1656392 . + . ID=Thaps22837.1;Parent=Thaps22837;constitutive=1;rank=1 chr5 . CDS 1656535 1659798 . + 0 ID=Thaps22837;Parent=Thaps22837;rank=2 chr5 . exon 1656535 1659798 . + . ID=Thaps22837.2;Parent=Thaps22837;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1650882 1651372 . + . ID=Thaps262597;biotype=protein_coding;description=Putative uncharacterized protein FRU2 [Source:UniProtKB/TrEMBL%3BAcc:B8C3E9];external_name=FRU2;logic_name=jgi_thaps3 chr5 ensembl transcript 1650882 1651372 . + . ID=Thaps262597;Parent=Thaps262597;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1650882 1651260 . + 0 ID=Thaps262597;Parent=Thaps262597;rank=1 chr5 . exon 1650882 1651260 . + . ID=Thaps262597.1;Parent=Thaps262597;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1651350 1651372 . + 0 ID=Thaps262597;Parent=Thaps262597;rank=2 chr5 . exon 1651350 1651372 . + . ID=Thaps262597.2;Parent=Thaps262597;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1654342 1654854 . + . ID=Thaps34306;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3F0];external_name=Thaps34306;logic_name=jgi_thaps3 chr5 ensembl transcript 1654342 1654854 . + . ID=Thaps34306;Parent=Thaps34306;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1654342 1654854 . + 0 ID=Thaps34306;Parent=Thaps34306;rank=1 chr5 . exon 1654342 1654854 . + . ID=Thaps34306.1;Parent=Thaps34306;constitutive=1;rank=1 chr5 . repeat_region 1661438 1661445 . ? . description=dust chr5 . repeat_region 1664737 1664745 . ? . description=dust chr5 . repeat_region 1665653 1665660 . ? . description=dust chr5 ensembl protein_coding_gene 1665157 1665387 . + . ID=Thaps262598;biotype=protein_coding;description=Dna-directed RNA polymerase i [Source:UniProtKB/TrEMBL%3BAcc:B8C3F5];external_name=Thaps262598;logic_name=jgi_thaps3 chr5 ensembl transcript 1665157 1665387 . + . ID=Thaps262598;Parent=Thaps262598;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1665157 1665387 . + 0 ID=Thaps262598;Parent=Thaps262598;rank=1 chr5 . exon 1665157 1665387 . + . ID=Thaps262598.1;Parent=Thaps262598;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1659839 1660918 . - . ID=Thaps5622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3F2];external_name=Thaps5622;logic_name=jgi_thaps3 chr5 ensembl transcript 1659839 1660918 . - . ID=Thaps5622;Parent=Thaps5622;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1659839 1660918 . - 0 ID=Thaps5622;Parent=Thaps5622;rank=1 chr5 . exon 1659839 1660918 . - . ID=Thaps5622.1;Parent=Thaps5622;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1662185 1663162 . - . ID=Thaps5623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3F3];external_name=Thaps5623;logic_name=jgi_thaps3 chr5 ensembl transcript 1662185 1663162 . - . ID=Thaps5623;Parent=Thaps5623;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1662185 1663162 . - 0 ID=Thaps5623;Parent=Thaps5623;rank=1 chr5 . exon 1662185 1663162 . - . ID=Thaps5623.1;Parent=Thaps5623;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1663498 1664586 . + . ID=Thaps5624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3F4];external_name=Thaps5624;logic_name=jgi_thaps3 chr5 ensembl transcript 1663498 1664586 . + . ID=Thaps5624;Parent=Thaps5624;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1663498 1664586 . + 0 ID=Thaps5624;Parent=Thaps5624;rank=1 chr5 . exon 1663498 1664586 . + . ID=Thaps5624.1;Parent=Thaps5624;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1665839 1666846 . + . ID=Thaps5626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3F6];external_name=Thaps5626;logic_name=jgi_thaps3 chr5 ensembl transcript 1665839 1666846 . + . ID=Thaps5626;Parent=Thaps5626;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1665839 1666846 . + 0 ID=Thaps5626;Parent=Thaps5626;rank=1 chr5 . exon 1665839 1666846 . + . ID=Thaps5626.1;Parent=Thaps5626;constitutive=1;rank=1 chr5 . repeat_region 1667510 1667540 . ? . description=trf chr5 . repeat_region 1667950 1667969 . ? . description=trf chr5 ensembl protein_coding_gene 1670277 1671467 . - . ID=Thaps22840;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3F8];external_name=Thaps22840;logic_name=jgi_thaps3 chr5 ensembl transcript 1670277 1671467 . - . ID=Thaps22840;Parent=Thaps22840;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1670277 1671109 . - 0 ID=Thaps22840;Parent=Thaps22840;rank=2 chr5 . exon 1670277 1671109 . - . ID=Thaps22840.2;Parent=Thaps22840;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1671182 1671467 . - 0 ID=Thaps22840;Parent=Thaps22840;rank=1 chr5 . exon 1671182 1671467 . - . ID=Thaps22840.1;Parent=Thaps22840;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1674521 1676248 . - . ID=Thaps22841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3F9];external_name=Thaps22841;logic_name=jgi_thaps3 chr5 ensembl transcript 1674521 1676248 . - . ID=Thaps22841;Parent=Thaps22841;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1674521 1676248 . - 0 ID=Thaps22841;Parent=Thaps22841;rank=1 chr5 . exon 1674521 1676248 . - . ID=Thaps22841.1;Parent=Thaps22841;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1668433 1669316 . + . ID=Thaps262599;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3F7];external_name=Thaps262599;logic_name=jgi_thaps3 chr5 ensembl transcript 1668433 1669316 . + . ID=Thaps262599;Parent=Thaps262599;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1668433 1669074 . + 0 ID=Thaps262599;Parent=Thaps262599;rank=1 chr5 . exon 1668433 1669074 . + . ID=Thaps262599.1;Parent=Thaps262599;constitutive=1;rank=1 chr5 . CDS 1669149 1669316 . + 0 ID=Thaps262599;Parent=Thaps262599;rank=2 chr5 . exon 1669149 1669316 . + . ID=Thaps262599.2;Parent=Thaps262599;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1676693 1679872 . + . ID=Thaps5630;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3G0];external_name=Thaps5630;logic_name=jgi_thaps3 chr5 ensembl transcript 1676693 1679872 . + . ID=Thaps5630;Parent=Thaps5630;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1676693 1679872 . + 0 ID=Thaps5630;Parent=Thaps5630;rank=1 chr5 . exon 1676693 1679872 . + . ID=Thaps5630.1;Parent=Thaps5630;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1681865 1682323 . + . ID=Thaps19301;biotype=protein_coding;description=Signal peptidase [Source:UniProtKB/TrEMBL%3BAcc:B8C3G1];external_name=Thaps19301;logic_name=jgi_thaps3 chr5 ensembl transcript 1681865 1682323 . + . ID=Thaps19301;Parent=Thaps19301;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1681865 1682062 . + 0 ID=Thaps19301;Parent=Thaps19301;rank=1 chr5 . exon 1681865 1682062 . + . ID=Thaps19301.1;Parent=Thaps19301;constitutive=1;rank=1 chr5 . CDS 1682150 1682323 . + 0 ID=Thaps19301;Parent=Thaps19301;rank=2 chr5 . exon 1682150 1682323 . + . ID=Thaps19301.2;Parent=Thaps19301;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1682628 1683275 . - . ID=Thaps5631;biotype=protein_coding;description=Sigma subunit of clathrin adaptor complex AP4 [Source:UniProtKB/TrEMBL%3BAcc:B8C3G2];external_name=APS4;logic_name=jgi_thaps3 chr5 ensembl transcript 1682628 1683275 . - . ID=Thaps5631;Parent=Thaps5631;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1682628 1682864 . - 0 ID=Thaps5631;Parent=Thaps5631;rank=3 chr5 . exon 1682628 1682864 . - . ID=Thaps5631.3;Parent=Thaps5631;constitutive=1;rank=3 chr5 . CDS 1682904 1683108 . - 0 ID=Thaps5631;Parent=Thaps5631;rank=2 chr5 . exon 1682904 1683108 . - . ID=Thaps5631.2;Parent=Thaps5631;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1683253 1683275 . - 0 ID=Thaps5631;Parent=Thaps5631;rank=1 chr5 . exon 1683253 1683275 . - . ID=Thaps5631.1;Parent=Thaps5631;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1684194 1686235 . - . ID=Thaps5632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3G3];external_name=Thaps5632;logic_name=jgi_thaps3 chr5 ensembl transcript 1684194 1686235 . - . ID=Thaps5632;Parent=Thaps5632;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1684194 1684756 . - 0 ID=Thaps5632;Parent=Thaps5632;rank=4 chr5 . exon 1684194 1684756 . - . ID=Thaps5632.4;Parent=Thaps5632;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1684842 1685455 . - 0 ID=Thaps5632;Parent=Thaps5632;rank=3 chr5 . exon 1684842 1685455 . - . ID=Thaps5632.3;Parent=Thaps5632;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1685535 1685828 . - 0 ID=Thaps5632;Parent=Thaps5632;rank=2 chr5 . exon 1685535 1685828 . - . ID=Thaps5632.2;Parent=Thaps5632;constitutive=1;rank=2 chr5 . CDS 1685922 1686235 . - 0 ID=Thaps5632;Parent=Thaps5632;rank=1 chr5 . exon 1685922 1686235 . - . ID=Thaps5632.1;Parent=Thaps5632;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . repeat_region 1693078 1693085 . ? . description=dust chr5 ensembl protein_coding_gene 1687215 1687751 . - . ID=Thaps22842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3G4];external_name=Thaps22842;logic_name=jgi_thaps3 chr5 ensembl transcript 1687215 1687751 . - . ID=Thaps22842;Parent=Thaps22842;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1687215 1687751 . - 0 ID=Thaps22842;Parent=Thaps22842;rank=1 chr5 . exon 1687215 1687751 . - . ID=Thaps22842.1;Parent=Thaps22842;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1687999 1696262 . - . ID=Thaps22843;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3G5];external_name=Thaps22843;logic_name=jgi_thaps3 chr5 ensembl transcript 1687999 1696262 . - . ID=Thaps22843;Parent=Thaps22843;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1687999 1689827 . - 0 ID=Thaps22843;Parent=Thaps22843;rank=9 chr5 . exon 1687999 1689827 . - . ID=Thaps22843.9;Parent=Thaps22843;constitutive=1;ensembl_end_phase=2;rank=9 chr5 . CDS 1689897 1690090 . - 0 ID=Thaps22843;Parent=Thaps22843;rank=8 chr5 . exon 1689897 1690090 . - . ID=Thaps22843.8;Parent=Thaps22843;constitutive=1;ensembl_end_phase=2;rank=8 chr5 . CDS 1690190 1690242 . - 0 ID=Thaps22843;Parent=Thaps22843;rank=7 chr5 . exon 1690190 1690242 . - . ID=Thaps22843.7;Parent=Thaps22843;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 1690289 1690900 . - 0 ID=Thaps22843;Parent=Thaps22843;rank=6 chr5 . exon 1690289 1690900 . - . ID=Thaps22843.6;Parent=Thaps22843;constitutive=1;rank=6 chr5 . CDS 1690999 1691852 . - 0 ID=Thaps22843;Parent=Thaps22843;rank=5 chr5 . exon 1690999 1691852 . - . ID=Thaps22843.5;Parent=Thaps22843;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 1691942 1692345 . - 0 ID=Thaps22843;Parent=Thaps22843;rank=4 chr5 . exon 1691942 1692345 . - . ID=Thaps22843.4;Parent=Thaps22843;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1692529 1693572 . - 0 ID=Thaps22843;Parent=Thaps22843;rank=3 chr5 . exon 1692529 1693572 . - . ID=Thaps22843.3;Parent=Thaps22843;constitutive=1;rank=3 chr5 . CDS 1693661 1695731 . - 0 ID=Thaps22843;Parent=Thaps22843;rank=2 chr5 . exon 1693661 1695731 . - . ID=Thaps22843.2;Parent=Thaps22843;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1695902 1696262 . - 0 ID=Thaps22843;Parent=Thaps22843;rank=1 chr5 . exon 1695902 1696262 . - . ID=Thaps22843.1;Parent=Thaps22843;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1696543 1697517 . + . ID=Thaps5635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3G6];external_name=Thaps5635;logic_name=jgi_thaps3 chr5 ensembl transcript 1696543 1697517 . + . ID=Thaps5635;Parent=Thaps5635;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1696543 1697517 . + 0 ID=Thaps5635;Parent=Thaps5635;rank=1 chr5 . exon 1696543 1697517 . + . ID=Thaps5635.1;Parent=Thaps5635;constitutive=1;rank=1 chr5 . repeat_region 1698707 1698754 . ? . description=trf chr5 . repeat_region 1698709 1698776 . ? . description=trf chr5 . repeat_region 1698709 1698778 . ? . description=trf chr5 ensembl protein_coding_gene 1698795 1700443 . + . ID=Thaps22844;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3G8];external_name=Thaps22844;logic_name=jgi_thaps3 chr5 ensembl transcript 1698795 1700443 . + . ID=Thaps22844;Parent=Thaps22844;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1698795 1699525 . + 0 ID=Thaps22844;Parent=Thaps22844;rank=1 chr5 . exon 1698795 1699525 . + . ID=Thaps22844.1;Parent=Thaps22844;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1699622 1699955 . + 0 ID=Thaps22844;Parent=Thaps22844;rank=2 chr5 . exon 1699622 1699955 . + . ID=Thaps22844.2;Parent=Thaps22844;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1700036 1700443 . + 0 ID=Thaps22844;Parent=Thaps22844;rank=3 chr5 . exon 1700036 1700443 . + . ID=Thaps22844.3;Parent=Thaps22844;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 1705599 1706723 . + . ID=Thaps22846;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H1];external_name=Thaps22846;logic_name=jgi_thaps3 chr5 ensembl transcript 1705599 1706723 . + . ID=Thaps22846;Parent=Thaps22846;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1705599 1706723 . + 0 ID=Thaps22846;Parent=Thaps22846;rank=1 chr5 . exon 1705599 1706723 . + . ID=Thaps22846.1;Parent=Thaps22846;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1703135 1704959 . - . ID=Thaps34332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H0];external_name=Thaps34332;logic_name=jgi_thaps3 chr5 ensembl transcript 1703135 1704959 . - . ID=Thaps34332;Parent=Thaps34332;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1703135 1703386 . - 0 ID=Thaps34332;Parent=Thaps34332;rank=5 chr5 . exon 1703135 1703386 . - . ID=Thaps34332.5;Parent=Thaps34332;constitutive=1;rank=5 chr5 . CDS 1703477 1703588 . - 0 ID=Thaps34332;Parent=Thaps34332;rank=4 chr5 . exon 1703477 1703588 . - . ID=Thaps34332.4;Parent=Thaps34332;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1703750 1704125 . - 0 ID=Thaps34332;Parent=Thaps34332;rank=3 chr5 . exon 1703750 1704125 . - . ID=Thaps34332.3;Parent=Thaps34332;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1704230 1704298 . - 0 ID=Thaps34332;Parent=Thaps34332;rank=2 chr5 . exon 1704230 1704298 . - . ID=Thaps34332.2;Parent=Thaps34332;constitutive=1;rank=2 chr5 . CDS 1704350 1704959 . - 0 ID=Thaps34332;Parent=Thaps34332;rank=1 chr5 . exon 1704350 1704959 . - . ID=Thaps34332.1;Parent=Thaps34332;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1697567 1698496 . - . ID=Thaps5636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3G7];external_name=Thaps5636;logic_name=jgi_thaps3 chr5 ensembl transcript 1697567 1698496 . - . ID=Thaps5636;Parent=Thaps5636;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1697567 1698496 . - 0 ID=Thaps5636;Parent=Thaps5636;rank=1 chr5 . exon 1697567 1698496 . - . ID=Thaps5636.1;Parent=Thaps5636;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1700633 1702063 . + . ID=Thaps5638;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3G9];external_name=Thaps5638;logic_name=jgi_thaps3 chr5 ensembl transcript 1700633 1702063 . + . ID=Thaps5638;Parent=Thaps5638;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1700633 1702063 . + 0 ID=Thaps5638;Parent=Thaps5638;rank=1 chr5 . exon 1700633 1702063 . + . ID=Thaps5638.1;Parent=Thaps5638;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1706815 1707898 . - . ID=Thaps5641;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H2];external_name=Thaps5641;logic_name=jgi_thaps3 chr5 ensembl transcript 1706815 1707898 . - . ID=Thaps5641;Parent=Thaps5641;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1706815 1707050 . - 0 ID=Thaps5641;Parent=Thaps5641;rank=3 chr5 . exon 1706815 1707050 . - . ID=Thaps5641.3;Parent=Thaps5641;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1707123 1707795 . - 0 ID=Thaps5641;Parent=Thaps5641;rank=2 chr5 . CDS 1707851 1707898 . - 0 ID=Thaps5641;Parent=Thaps5641;rank=1 chr5 ensembl protein_coding_gene 1708685 1710289 . + . ID=Thaps22847;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H3];external_name=Thaps22847;logic_name=jgi_thaps3 chr5 ensembl transcript 1708685 1710289 . + . ID=Thaps22847;Parent=Thaps22847;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1708685 1710289 . + 0 ID=Thaps22847;Parent=Thaps22847;rank=1 chr5 . exon 1708685 1710289 . + . ID=Thaps22847.1;Parent=Thaps22847;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1712180 1715953 . - . ID=Thaps22848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H5];external_name=Thaps22848;logic_name=jgi_thaps3 chr5 ensembl transcript 1712180 1715953 . - . ID=Thaps22848;Parent=Thaps22848;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1712180 1712244 . - 0 ID=Thaps22848;Parent=Thaps22848;rank=7 chr5 . exon 1712180 1712244 . - . ID=Thaps22848.7;Parent=Thaps22848;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 1712345 1712923 . - 0 ID=Thaps22848;Parent=Thaps22848;rank=6 chr5 . exon 1712345 1712923 . - . ID=Thaps22848.6;Parent=Thaps22848;constitutive=1;rank=6 chr5 . CDS 1713011 1713278 . - 0 ID=Thaps22848;Parent=Thaps22848;rank=5 chr5 . exon 1713011 1713278 . - . ID=Thaps22848.5;Parent=Thaps22848;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1713357 1713731 . - 0 ID=Thaps22848;Parent=Thaps22848;rank=4 chr5 . exon 1713357 1713731 . - . ID=Thaps22848.4;Parent=Thaps22848;constitutive=1;rank=4 chr5 . CDS 1713825 1714078 . - 0 ID=Thaps22848;Parent=Thaps22848;rank=3 chr5 . exon 1713825 1714078 . - . ID=Thaps22848.3;Parent=Thaps22848;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1714160 1715757 . - 0 ID=Thaps22848;Parent=Thaps22848;rank=2 chr5 . exon 1714160 1715757 . - . ID=Thaps22848.2;Parent=Thaps22848;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1715868 1715953 . - 0 ID=Thaps22848;Parent=Thaps22848;rank=1 chr5 . exon 1715868 1715953 . - . ID=Thaps22848.1;Parent=Thaps22848;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 1707123 1707795 . - . ID=Thaps5641.2;Parent=Thaps5641;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 1707851 1707898 . - . ID=Thaps5641.1;Parent=Thaps5641;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1710689 1711162 . + . ID=Thaps5643;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H4];external_name=Thaps5643;logic_name=jgi_thaps3 chr5 ensembl transcript 1710689 1711162 . + . ID=Thaps5643;Parent=Thaps5643;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1710689 1710898 . + 0 ID=Thaps5643;Parent=Thaps5643;rank=1 chr5 . exon 1710689 1710898 . + . ID=Thaps5643.1;Parent=Thaps5643;constitutive=1;rank=1 chr5 . CDS 1711031 1711162 . + 0 ID=Thaps5643;Parent=Thaps5643;rank=2 chr5 . exon 1711031 1711162 . + . ID=Thaps5643.2;Parent=Thaps5643;constitutive=1;rank=2 chr5 . repeat_region 1717966 1717995 . ? . description=dust chr5 . repeat_region 1718369 1718388 . ? . description=dust chr5 . repeat_region 1725056 1725150 . ? . description=trf chr5 . repeat_region 1725271 1725303 . ? . description=trf chr5 . repeat_region 1725271 1725305 . ? . description=dust chr5 ensembl protein_coding_gene 1726392 1729250 . - . ID=Thaps22850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H7];external_name=Thaps22850;logic_name=jgi_thaps3 chr5 ensembl transcript 1726392 1729250 . - . ID=Thaps22850;Parent=Thaps22850;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1726392 1726805 . - 0 ID=Thaps22850;Parent=Thaps22850;rank=4 chr5 . exon 1726392 1726805 . - . ID=Thaps22850.4;Parent=Thaps22850;constitutive=1;rank=4 chr5 . CDS 1726845 1727600 . - 0 ID=Thaps22850;Parent=Thaps22850;rank=3 chr5 . exon 1726845 1727600 . - . ID=Thaps22850.3;Parent=Thaps22850;constitutive=1;rank=3 chr5 . CDS 1727653 1727776 . - 0 ID=Thaps22850;Parent=Thaps22850;rank=2 chr5 . CDS 1727827 1729250 . - 0 ID=Thaps22850;Parent=Thaps22850;rank=1 chr5 ensembl protein_coding_gene 1720517 1722659 . + . ID=Thaps262607;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H6];external_name=Thaps262607;logic_name=jgi_thaps3 chr5 ensembl transcript 1720517 1722659 . + . ID=Thaps262607;Parent=Thaps262607;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1720517 1720604 . + 0 ID=Thaps262607;Parent=Thaps262607;rank=1 chr5 . exon 1720517 1720604 . + . ID=Thaps262607.1;Parent=Thaps262607;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1720671 1720868 . + 0 ID=Thaps262607;Parent=Thaps262607;rank=2 chr5 . exon 1720671 1720868 . + . ID=Thaps262607.2;Parent=Thaps262607;constitutive=1;rank=2 chr5 . CDS 1721299 1721506 . + 0 ID=Thaps262607;Parent=Thaps262607;rank=3 chr5 . exon 1721299 1721506 . + . ID=Thaps262607.3;Parent=Thaps262607;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1721744 1722014 . + 0 ID=Thaps262607;Parent=Thaps262607;rank=4 chr5 . exon 1721744 1722014 . + . ID=Thaps262607.4;Parent=Thaps262607;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1722162 1722659 . + 0 ID=Thaps262607;Parent=Thaps262607;rank=5 chr5 . exon 1722162 1722659 . + . ID=Thaps262607.5;Parent=Thaps262607;constitutive=1;rank=5 chr5 . exon 1727653 1727776 . - . ID=Thaps22850.2;Parent=Thaps22850;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 1727827 1729250 . - . ID=Thaps22850.1;Parent=Thaps22850;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1733103 1734563 . - . ID=Thaps22851;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H9];external_name=Thaps22851;logic_name=jgi_thaps3 chr5 ensembl transcript 1733103 1734563 . - . ID=Thaps22851;Parent=Thaps22851;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1733103 1734563 . - 0 ID=Thaps22851;Parent=Thaps22851;rank=1 chr5 . exon 1733103 1734563 . - . ID=Thaps22851.1;Parent=Thaps22851;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1734867 1735892 . - . ID=Thaps22852;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I0];external_name=Thaps22852;logic_name=jgi_thaps3 chr5 ensembl transcript 1734867 1735892 . - . ID=Thaps22852;Parent=Thaps22852;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1734867 1735892 . - 0 ID=Thaps22852;Parent=Thaps22852;rank=1 chr5 . exon 1734867 1735892 . - . ID=Thaps22852.1;Parent=Thaps22852;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1729577 1732921 . + . ID=Thaps5647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3H8];external_name=Thaps5647;logic_name=jgi_thaps3 chr5 ensembl transcript 1729577 1732921 . + . ID=Thaps5647;Parent=Thaps5647;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1729577 1730755 . + 0 ID=Thaps5647;Parent=Thaps5647;rank=1 chr5 . exon 1729577 1730755 . + . ID=Thaps5647.1;Parent=Thaps5647;constitutive=1;rank=1 chr5 . CDS 1731151 1731513 . + 0 ID=Thaps5647;Parent=Thaps5647;rank=2 chr5 . exon 1731151 1731513 . + . ID=Thaps5647.2;Parent=Thaps5647;constitutive=1;rank=2 chr5 . CDS 1731611 1731643 . + 0 ID=Thaps5647;Parent=Thaps5647;rank=3 chr5 . exon 1731611 1731643 . + . ID=Thaps5647.3;Parent=Thaps5647;constitutive=1;rank=3 chr5 . CDS 1731736 1732064 . + 0 ID=Thaps5647;Parent=Thaps5647;rank=4 chr5 . exon 1731736 1732064 . + . ID=Thaps5647.4;Parent=Thaps5647;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1732243 1732921 . + 0 ID=Thaps5647;Parent=Thaps5647;rank=5 chr5 . exon 1732243 1732921 . + . ID=Thaps5647.5;Parent=Thaps5647;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . repeat_region 1737855 1737870 . ? . description=dust chr5 . repeat_region 1738006 1738014 . ? . description=dust chr5 . repeat_region 1739994 1740004 . ? . description=dust chr5 ensembl protein_coding_gene 1738097 1738471 . + . ID=Thaps19374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I2];external_name=Thaps19374;logic_name=jgi_thaps3 chr5 ensembl transcript 1738097 1738471 . + . ID=Thaps19374;Parent=Thaps19374;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1738097 1738471 . + 0 ID=Thaps19374;Parent=Thaps19374;rank=1 chr5 . exon 1738097 1738471 . + . ID=Thaps19374.1;Parent=Thaps19374;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1737159 1737356 . - . ID=Thaps20461;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I1];external_name=Thaps20461;logic_name=jgi_thaps3 chr5 ensembl transcript 1737159 1737356 . - . ID=Thaps20461;Parent=Thaps20461;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1737159 1737356 . - 0 ID=Thaps20461;Parent=Thaps20461;rank=1 chr5 . exon 1737159 1737356 . - . ID=Thaps20461.1;Parent=Thaps20461;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1738972 1739943 . - . ID=Thaps22854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I3];external_name=Thaps22854;logic_name=jgi_thaps3 chr5 ensembl transcript 1738972 1739943 . - . ID=Thaps22854;Parent=Thaps22854;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1738972 1739943 . - 0 ID=Thaps22854;Parent=Thaps22854;rank=1 chr5 . exon 1738972 1739943 . - . ID=Thaps22854.1;Parent=Thaps22854;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1741796 1744138 . - . ID=Thaps22855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I5];external_name=Thaps22855;logic_name=jgi_thaps3 chr5 ensembl transcript 1741796 1744138 . - . ID=Thaps22855;Parent=Thaps22855;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1741796 1744138 . - 0 ID=Thaps22855;Parent=Thaps22855;rank=1 chr5 . exon 1741796 1744138 . - . ID=Thaps22855.1;Parent=Thaps22855;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1740120 1741685 . + . ID=Thaps5653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I4];external_name=Thaps5653;logic_name=jgi_thaps3 chr5 ensembl transcript 1740120 1741685 . + . ID=Thaps5653;Parent=Thaps5653;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1740120 1741685 . + 0 ID=Thaps5653;Parent=Thaps5653;rank=1 chr5 . exon 1740120 1741685 . + . ID=Thaps5653.1;Parent=Thaps5653;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1745051 1745896 . - . ID=Thaps5655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I6];external_name=Thaps5655;logic_name=jgi_thaps3 chr5 ensembl transcript 1745051 1745896 . - . ID=Thaps5655;Parent=Thaps5655;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1745051 1745896 . - 0 ID=Thaps5655;Parent=Thaps5655;rank=1 chr5 . exon 1745051 1745896 . - . ID=Thaps5655.1;Parent=Thaps5655;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1746078 1747062 . + . ID=Thaps5656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I7];external_name=Thaps5656;logic_name=jgi_thaps3 chr5 ensembl transcript 1746078 1747062 . + . ID=Thaps5656;Parent=Thaps5656;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1746078 1746698 . + 0 ID=Thaps5656;Parent=Thaps5656;rank=1 chr5 . exon 1746078 1746698 . + . ID=Thaps5656.1;Parent=Thaps5656;constitutive=1;rank=1 chr5 . CDS 1746841 1747062 . + 0 ID=Thaps5656;Parent=Thaps5656;rank=2 chr5 . exon 1746841 1747062 . + . ID=Thaps5656.2;Parent=Thaps5656;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1747671 1748711 . + . ID=Thaps5657;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I8];external_name=Thaps5657;logic_name=jgi_thaps3 chr5 ensembl transcript 1747671 1748711 . + . ID=Thaps5657;Parent=Thaps5657;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1747671 1748711 . + 0 ID=Thaps5657;Parent=Thaps5657;rank=1 chr5 . exon 1747671 1748711 . + . ID=Thaps5657.1;Parent=Thaps5657;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1748969 1749894 . - . ID=Thaps5658;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3I9];external_name=Thaps5658;logic_name=jgi_thaps3 chr5 ensembl transcript 1748969 1749894 . - . ID=Thaps5658;Parent=Thaps5658;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1748969 1749662 . - 0 ID=Thaps5658;Parent=Thaps5658;rank=2 chr5 . exon 1748969 1749662 . - . ID=Thaps5658.2;Parent=Thaps5658;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1749710 1749894 . - 0 ID=Thaps5658;Parent=Thaps5658;rank=1 chr5 . exon 1749710 1749894 . - . ID=Thaps5658.1;Parent=Thaps5658;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1750391 1751835 . + . ID=Thaps5659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J0];external_name=Thaps5659;logic_name=jgi_thaps3 chr5 ensembl transcript 1750391 1751835 . + . ID=Thaps5659;Parent=Thaps5659;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1750391 1751161 . + 0 ID=Thaps5659;Parent=Thaps5659;rank=1 chr5 . exon 1750391 1751161 . + . ID=Thaps5659.1;Parent=Thaps5659;constitutive=1;rank=1 chr5 . CDS 1751257 1751835 . + 0 ID=Thaps5659;Parent=Thaps5659;rank=2 chr5 . exon 1751257 1751835 . + . ID=Thaps5659.2;Parent=Thaps5659;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1753242 1756802 . + . ID=Thaps5660;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J1];external_name=Thaps5660;logic_name=jgi_thaps3 chr5 ensembl transcript 1753242 1756802 . + . ID=Thaps5660;Parent=Thaps5660;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1753242 1754800 . + 0 ID=Thaps5660;Parent=Thaps5660;rank=1 chr5 . exon 1753242 1754800 . + . ID=Thaps5660.1;Parent=Thaps5660;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1754897 1755134 . + 0 ID=Thaps5660;Parent=Thaps5660;rank=2 chr5 . exon 1754897 1755134 . + . ID=Thaps5660.2;Parent=Thaps5660;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1755294 1756802 . + 0 ID=Thaps5660;Parent=Thaps5660;rank=3 chr5 . exon 1755294 1756802 . + . ID=Thaps5660.3;Parent=Thaps5660;constitutive=1;rank=3 chr5 ensembl protein_coding_gene 1761984 1764479 . - . ID=Thaps22857;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J4];external_name=Thaps22857;logic_name=jgi_thaps3 chr5 ensembl transcript 1761984 1764479 . - . ID=Thaps22857;Parent=Thaps22857;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1761984 1764479 . - 0 ID=Thaps22857;Parent=Thaps22857;rank=1 chr5 . exon 1761984 1764479 . - . ID=Thaps22857.1;Parent=Thaps22857;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1757110 1757628 . - . ID=Thaps40817;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J2];external_name=Thaps40817;logic_name=jgi_thaps3 chr5 ensembl transcript 1757110 1757628 . - . ID=Thaps40817;Parent=Thaps40817;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1757110 1757373 . - 0 ID=Thaps40817;Parent=Thaps40817;rank=2 chr5 . exon 1757110 1757373 . - . ID=Thaps40817.2;Parent=Thaps40817;constitutive=1;rank=2 chr5 . CDS 1757524 1757628 . - 0 ID=Thaps40817;Parent=Thaps40817;rank=1 chr5 . exon 1757524 1757628 . - . ID=Thaps40817.1;Parent=Thaps40817;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1758359 1761737 . + . ID=Thaps5662;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J3];external_name=Thaps5662;logic_name=jgi_thaps3 chr5 ensembl transcript 1758359 1761737 . + . ID=Thaps5662;Parent=Thaps5662;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1758359 1759095 . + 0 ID=Thaps5662;Parent=Thaps5662;rank=1 chr5 . exon 1758359 1759095 . + . ID=Thaps5662.1;Parent=Thaps5662;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1759187 1761737 . + 0 ID=Thaps5662;Parent=Thaps5662;rank=2 chr5 . exon 1759187 1761737 . + . ID=Thaps5662.2;Parent=Thaps5662;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1764863 1766482 . - . ID=Thaps5664;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J5];external_name=Thaps5664;logic_name=jgi_thaps3 chr5 ensembl transcript 1764863 1766482 . - . ID=Thaps5664;Parent=Thaps5664;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1764863 1766482 . - 0 ID=Thaps5664;Parent=Thaps5664;rank=1 chr5 . exon 1764863 1766482 . - . ID=Thaps5664.1;Parent=Thaps5664;constitutive=1;rank=1 chr5 . repeat_region 1770668 1770698 . ? . description=dust chr5 . repeat_region 1775791 1775840 . ? . description=trf chr5 ensembl protein_coding_gene 1767406 1769124 . - . ID=Thaps22858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J6];external_name=Thaps22858;logic_name=jgi_thaps3 chr5 ensembl transcript 1767406 1769124 . - . ID=Thaps22858;Parent=Thaps22858;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1767406 1767641 . - 0 ID=Thaps22858;Parent=Thaps22858;rank=4 chr5 . exon 1767406 1767641 . - . ID=Thaps22858.4;Parent=Thaps22858;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1767834 1768720 . - 0 ID=Thaps22858;Parent=Thaps22858;rank=3 chr5 . exon 1767834 1768720 . - . ID=Thaps22858.3;Parent=Thaps22858;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1768811 1768999 . - 0 ID=Thaps22858;Parent=Thaps22858;rank=2 chr5 . exon 1768811 1768999 . - . ID=Thaps22858.2;Parent=Thaps22858;constitutive=1;rank=2 chr5 . CDS 1769072 1769124 . - 0 ID=Thaps22858;Parent=Thaps22858;rank=1 chr5 . exon 1769072 1769124 . - . ID=Thaps22858.1;Parent=Thaps22858;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1770572 1773007 . + . ID=Thaps5666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J7];external_name=Thaps5666;logic_name=jgi_thaps3 chr5 ensembl transcript 1770572 1773007 . + . ID=Thaps5666;Parent=Thaps5666;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1770572 1773007 . + 0 ID=Thaps5666;Parent=Thaps5666;rank=1 chr5 . exon 1770572 1773007 . + . ID=Thaps5666.1;Parent=Thaps5666;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1773104 1774284 . - . ID=Thaps5667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J8];external_name=Thaps5667;logic_name=jgi_thaps3 chr5 ensembl transcript 1773104 1774284 . - . ID=Thaps5667;Parent=Thaps5667;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1773104 1773866 . - 0 ID=Thaps5667;Parent=Thaps5667;rank=2 chr5 . exon 1773104 1773866 . - . ID=Thaps5667.2;Parent=Thaps5667;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1774121 1774284 . - 0 ID=Thaps5667;Parent=Thaps5667;rank=1 chr5 . exon 1774121 1774284 . - . ID=Thaps5667.1;Parent=Thaps5667;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1775232 1775576 . - . ID=Thaps5668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3J9];external_name=Thaps5668;logic_name=jgi_thaps3 chr5 ensembl transcript 1775232 1775576 . - . ID=Thaps5668;Parent=Thaps5668;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1775232 1775576 . - 0 ID=Thaps5668;Parent=Thaps5668;rank=1 chr5 . exon 1775232 1775576 . - . ID=Thaps5668.1;Parent=Thaps5668;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1776621 1777997 . + . ID=Thaps5669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K0];external_name=Thaps5669;logic_name=jgi_thaps3 chr5 ensembl transcript 1776621 1777997 . + . ID=Thaps5669;Parent=Thaps5669;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1776621 1777997 . + 0 ID=Thaps5669;Parent=Thaps5669;rank=1 chr5 . exon 1776621 1777997 . + . ID=Thaps5669.1;Parent=Thaps5669;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1778392 1782651 . - . ID=Thaps22859;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K1];external_name=Thaps22859;logic_name=jgi_thaps3 chr5 ensembl transcript 1778392 1782651 . - . ID=Thaps22859;Parent=Thaps22859;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1778392 1778711 . - 0 ID=Thaps22859;Parent=Thaps22859;rank=3 chr5 . exon 1778392 1778711 . - . ID=Thaps22859.3;Parent=Thaps22859;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1778876 1780439 . - 0 ID=Thaps22859;Parent=Thaps22859;rank=2 chr5 . exon 1778876 1780439 . - . ID=Thaps22859.2;Parent=Thaps22859;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1780534 1782651 . - 0 ID=Thaps22859;Parent=Thaps22859;rank=1 chr5 . exon 1780534 1782651 . - . ID=Thaps22859.1;Parent=Thaps22859;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1782972 1785055 . + . ID=Thaps5671;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K2];external_name=Thaps5671;logic_name=jgi_thaps3 chr5 ensembl transcript 1782972 1785055 . + . ID=Thaps5671;Parent=Thaps5671;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1782972 1784800 . + 0 ID=Thaps5671;Parent=Thaps5671;rank=1 chr5 . exon 1782972 1784800 . + . ID=Thaps5671.1;Parent=Thaps5671;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1785046 1785055 . + 0 ID=Thaps5671;Parent=Thaps5671;rank=2 chr5 . exon 1785046 1785055 . + . ID=Thaps5671.2;Parent=Thaps5671;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1785494 1786597 . - . ID=Thaps5672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K3];external_name=Thaps5672;logic_name=jgi_thaps3 chr5 ensembl transcript 1785494 1786597 . - . ID=Thaps5672;Parent=Thaps5672;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1785494 1786597 . - 0 ID=Thaps5672;Parent=Thaps5672;rank=1 chr5 . exon 1785494 1786597 . - . ID=Thaps5672.1;Parent=Thaps5672;constitutive=1;rank=1 chr5 . repeat_region 1790508 1790517 . ? . description=dust chr5 . repeat_region 1793543 1793626 . ? . description=dust chr5 . repeat_region 1793584 1793625 . ? . description=trf chr5 ensembl protein_coding_gene 1790692 1791359 . + . ID=Thaps22860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K6];external_name=Thaps22860;logic_name=jgi_thaps3 chr5 ensembl transcript 1790692 1791359 . + . ID=Thaps22860;Parent=Thaps22860;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1790692 1790775 . + 0 ID=Thaps22860;Parent=Thaps22860;rank=1 chr5 . exon 1790692 1790775 . + . ID=Thaps22860.1;Parent=Thaps22860;constitutive=1;rank=1 chr5 . CDS 1790985 1791359 . + 0 ID=Thaps22860;Parent=Thaps22860;rank=2 chr5 . exon 1790985 1791359 . + . ID=Thaps22860.2;Parent=Thaps22860;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1793166 1794274 . + . ID=Thaps22861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K8];external_name=Thaps22861;logic_name=jgi_thaps3 chr5 ensembl transcript 1793166 1794274 . + . ID=Thaps22861;Parent=Thaps22861;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1793166 1793910 . + 0 ID=Thaps22861;Parent=Thaps22861;rank=1 chr5 . exon 1793166 1793910 . + . ID=Thaps22861.1;Parent=Thaps22861;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1794007 1794075 . + 0 ID=Thaps22861;Parent=Thaps22861;rank=2 chr5 . exon 1794007 1794075 . + . ID=Thaps22861.2;Parent=Thaps22861;constitutive=1;rank=2 chr5 . CDS 1794183 1794274 . + 0 ID=Thaps22861;Parent=Thaps22861;rank=3 chr5 . exon 1794183 1794274 . + . ID=Thaps22861.3;Parent=Thaps22861;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 1789583 1790286 . - . ID=Thaps262610;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K5];external_name=Thaps262610;logic_name=jgi_thaps3 chr5 ensembl transcript 1789583 1790286 . - . ID=Thaps262610;Parent=Thaps262610;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1789583 1790286 . - 0 ID=Thaps262610;Parent=Thaps262610;rank=1 chr5 . exon 1789583 1790286 . - . ID=Thaps262610.1;Parent=Thaps262610;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1788143 1788448 . + . ID=Thaps34340;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K4];external_name=Thaps34340;logic_name=jgi_thaps3 chr5 ensembl transcript 1788143 1788448 . + . ID=Thaps34340;Parent=Thaps34340;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1788143 1788448 . + 0 ID=Thaps34340;Parent=Thaps34340;rank=1 chr5 . exon 1788143 1788448 . + . ID=Thaps34340.1;Parent=Thaps34340;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1791993 1792590 . - . ID=Thaps5675;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K7];external_name=Thaps5675;logic_name=jgi_thaps3 chr5 ensembl transcript 1791993 1792590 . - . ID=Thaps5675;Parent=Thaps5675;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1791993 1792112 . - 0 ID=Thaps5675;Parent=Thaps5675;rank=2 chr5 . exon 1791993 1792112 . - . ID=Thaps5675.2;Parent=Thaps5675;constitutive=1;rank=2 chr5 . CDS 1792243 1792590 . - 0 ID=Thaps5675;Parent=Thaps5675;rank=1 chr5 . exon 1792243 1792590 . - . ID=Thaps5675.1;Parent=Thaps5675;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1794688 1797442 . - . ID=Thaps5677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3K9];external_name=Thaps5677;logic_name=jgi_thaps3 chr5 ensembl transcript 1794688 1797442 . - . ID=Thaps5677;Parent=Thaps5677;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1794688 1795436 . - 0 ID=Thaps5677;Parent=Thaps5677;rank=6 chr5 . exon 1794688 1795436 . - . ID=Thaps5677.6;Parent=Thaps5677;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 1795510 1795840 . - 0 ID=Thaps5677;Parent=Thaps5677;rank=5 chr5 . exon 1795510 1795840 . - . ID=Thaps5677.5;Parent=Thaps5677;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1795927 1796043 . - 0 ID=Thaps5677;Parent=Thaps5677;rank=4 chr5 . exon 1795927 1796043 . - . ID=Thaps5677.4;Parent=Thaps5677;constitutive=1;rank=4 chr5 . CDS 1796127 1796654 . - 0 ID=Thaps5677;Parent=Thaps5677;rank=3 chr5 . exon 1796127 1796654 . - . ID=Thaps5677.3;Parent=Thaps5677;constitutive=1;rank=3 chr5 . CDS 1796925 1797203 . - 0 ID=Thaps5677;Parent=Thaps5677;rank=2 chr5 . exon 1796925 1797203 . - . ID=Thaps5677.2;Parent=Thaps5677;constitutive=1;rank=2 chr5 . CDS 1797296 1797442 . - 0 ID=Thaps5677;Parent=Thaps5677;rank=1 chr5 ensembl protein_coding_gene 1798350 1799513 . + . ID=Thaps22862;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3L0];external_name=Thaps22862;logic_name=jgi_thaps3 chr5 ensembl transcript 1798350 1799513 . + . ID=Thaps22862;Parent=Thaps22862;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1798350 1799513 . + 0 ID=Thaps22862;Parent=Thaps22862;rank=1 chr5 . exon 1798350 1799513 . + . ID=Thaps22862.1;Parent=Thaps22862;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1803111 1806960 . + . ID=Thaps22863;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3L2];external_name=Thaps22863;logic_name=jgi_thaps3 chr5 ensembl transcript 1803111 1806960 . + . ID=Thaps22863;Parent=Thaps22863;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1803111 1803355 . + 0 ID=Thaps22863;Parent=Thaps22863;rank=1 chr5 . exon 1803111 1803355 . + . ID=Thaps22863.1;Parent=Thaps22863;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1803482 1804925 . + 0 ID=Thaps22863;Parent=Thaps22863;rank=2 chr5 . exon 1803482 1804925 . + . ID=Thaps22863.2;Parent=Thaps22863;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1805013 1805267 . + 0 ID=Thaps22863;Parent=Thaps22863;rank=3 chr5 . exon 1805013 1805267 . + . ID=Thaps22863.3;Parent=Thaps22863;constitutive=1;rank=3 chr5 . CDS 1805344 1806960 . + 0 ID=Thaps22863;Parent=Thaps22863;rank=4 chr5 . exon 1805344 1806960 . + . ID=Thaps22863.4;Parent=Thaps22863;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 1801284 1802604 . - . ID=Thaps262611;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3L1];external_name=Thaps262611;logic_name=jgi_thaps3 chr5 ensembl transcript 1801284 1802604 . - . ID=Thaps262611;Parent=Thaps262611;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1801284 1801692 . - 0 ID=Thaps262611;Parent=Thaps262611;rank=6 chr5 . exon 1801284 1801692 . - . ID=Thaps262611.6;Parent=Thaps262611;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 1801831 1801882 . - 0 ID=Thaps262611;Parent=Thaps262611;rank=5 chr5 . exon 1801831 1801882 . - . ID=Thaps262611.5;Parent=Thaps262611;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1801955 1802004 . - 0 ID=Thaps262611;Parent=Thaps262611;rank=4 chr5 . exon 1801955 1802004 . - . ID=Thaps262611.4;Parent=Thaps262611;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1802050 1802157 . - 0 ID=Thaps262611;Parent=Thaps262611;rank=3 chr5 . exon 1802050 1802157 . - . ID=Thaps262611.3;Parent=Thaps262611;constitutive=1;rank=3 chr5 . CDS 1802282 1802350 . - 0 ID=Thaps262611;Parent=Thaps262611;rank=2 chr5 . exon 1802282 1802350 . - . ID=Thaps262611.2;Parent=Thaps262611;constitutive=1;rank=2 chr5 . CDS 1802511 1802604 . - 0 ID=Thaps262611;Parent=Thaps262611;rank=1 chr5 . exon 1802511 1802604 . - . ID=Thaps262611.1;Parent=Thaps262611;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . exon 1797296 1797442 . - . ID=Thaps5677.1;Parent=Thaps5677;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1807211 1810247 . + . ID=Thaps22864;biotype=protein_coding;description=Sarcosine dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C3L3];external_name=SDH;logic_name=jgi_thaps3 chr5 ensembl transcript 1807211 1810247 . + . ID=Thaps22864;Parent=Thaps22864;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1807211 1807565 . + 0 ID=Thaps22864;Parent=Thaps22864;rank=1 chr5 . exon 1807211 1807565 . + . ID=Thaps22864.1;Parent=Thaps22864;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1807670 1807716 . + 0 ID=Thaps22864;Parent=Thaps22864;rank=2 chr5 . exon 1807670 1807716 . + . ID=Thaps22864.2;Parent=Thaps22864;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1807809 1808031 . + 0 ID=Thaps22864;Parent=Thaps22864;rank=3 chr5 . exon 1807809 1808031 . + . ID=Thaps22864.3;Parent=Thaps22864;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1808123 1808644 . + 0 ID=Thaps22864;Parent=Thaps22864;rank=4 chr5 . exon 1808123 1808644 . + . ID=Thaps22864.4;Parent=Thaps22864;constitutive=1;rank=4 chr5 . CDS 1808707 1810247 . + 0 ID=Thaps22864;Parent=Thaps22864;rank=5 chr5 . exon 1808707 1810247 . + . ID=Thaps22864.5;Parent=Thaps22864;constitutive=1;ensembl_end_phase=2;rank=5 chr5 ensembl protein_coding_gene 1810655 1812049 . - . ID=Thaps262613;biotype=protein_coding;description=Phosphotyrosyl phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8C3L4];external_name=Thaps262613;logic_name=jgi_thaps3 chr5 ensembl transcript 1810655 1812049 . - . ID=Thaps262613;Parent=Thaps262613;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1810655 1810943 . - 0 ID=Thaps262613;Parent=Thaps262613;rank=5 chr5 . exon 1810655 1810943 . - . ID=Thaps262613.5;Parent=Thaps262613;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1811070 1811252 . - 0 ID=Thaps262613;Parent=Thaps262613;rank=4 chr5 . exon 1811070 1811252 . - . ID=Thaps262613.4;Parent=Thaps262613;constitutive=1;rank=4 chr5 . CDS 1811307 1811443 . - 0 ID=Thaps262613;Parent=Thaps262613;rank=3 chr5 . exon 1811307 1811443 . - . ID=Thaps262613.3;Parent=Thaps262613;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 1811609 1811815 . - 0 ID=Thaps262613;Parent=Thaps262613;rank=2 chr5 . exon 1811609 1811815 . - . ID=Thaps262613.2;Parent=Thaps262613;constitutive=1;rank=2 chr5 . CDS 1811897 1812049 . - 0 ID=Thaps262613;Parent=Thaps262613;rank=1 chr5 . exon 1811897 1812049 . - . ID=Thaps262613.1;Parent=Thaps262613;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1812738 1816447 . + . ID=Thaps268943;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3L5];external_name=Thaps268943;logic_name=jgi_thaps3 chr5 ensembl transcript 1812738 1816447 . + . ID=Thaps268943;Parent=Thaps268943;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1812738 1815648 . + 0 ID=Thaps268943;Parent=Thaps268943;rank=1 chr5 . exon 1812738 1815648 . + . ID=Thaps268943.1;Parent=Thaps268943;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1815709 1815915 . + 0 ID=Thaps268943;Parent=Thaps268943;rank=2 chr5 . exon 1815709 1815915 . + . ID=Thaps268943.2;Parent=Thaps268943;constitutive=1;rank=2 chr5 . CDS 1815996 1816447 . + 0 ID=Thaps268943;Parent=Thaps268943;rank=3 chr5 . exon 1815996 1816447 . + . ID=Thaps268943.3;Parent=Thaps268943;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . repeat_region 1819868 1819900 . ? . description=trf chr5 . repeat_region 1819868 1819900 . ? . description=dust chr5 ensembl protein_coding_gene 1816952 1817590 . - . ID=Thaps22867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3L6];external_name=Thaps22867;logic_name=jgi_thaps3 chr5 ensembl transcript 1816952 1817590 . - . ID=Thaps22867;Parent=Thaps22867;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1816952 1817590 . - 0 ID=Thaps22867;Parent=Thaps22867;rank=1 chr5 . exon 1816952 1817590 . - . ID=Thaps22867.1;Parent=Thaps22867;constitutive=1;rank=1 chr5 ensembl gene 1820628 1821976 . + . ID=Thaps262615;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr5 ensembl transcript 1820628 1821976 . + . ID=Thaps262615;Parent=Thaps262615;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr5 . exon 1820628 1820700 . + . ID=Thaps262615.1;Parent=Thaps262615;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . exon 1820764 1821065 . + . ID=Thaps262615.2;Parent=Thaps262615;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 1821159 1821308 . + . ID=Thaps262615.3;Parent=Thaps262615;constitutive=1;rank=3 chr5 . exon 1821369 1821717 . + . ID=Thaps262615.4;Parent=Thaps262615;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . exon 1821769 1821976 . + . ID=Thaps262615.5;Parent=Thaps262615;constitutive=1;ensembl_end_phase=1;rank=5 chr5 ensembl protein_coding_gene 1824104 1825593 . - . ID=Thaps5686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3L7];external_name=Thaps5686;logic_name=jgi_thaps3 chr5 ensembl transcript 1824104 1825593 . - . ID=Thaps5686;Parent=Thaps5686;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1824104 1824748 . - 0 ID=Thaps5686;Parent=Thaps5686;rank=4 chr5 . exon 1824104 1824748 . - . ID=Thaps5686.4;Parent=Thaps5686;constitutive=1;rank=4 chr5 . CDS 1824834 1824912 . - 0 ID=Thaps5686;Parent=Thaps5686;rank=3 chr5 . exon 1824834 1824912 . - . ID=Thaps5686.3;Parent=Thaps5686;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1825009 1825272 . - 0 ID=Thaps5686;Parent=Thaps5686;rank=2 chr5 . exon 1825009 1825272 . - . ID=Thaps5686.2;Parent=Thaps5686;constitutive=1;rank=2 chr5 . CDS 1825418 1825593 . - 0 ID=Thaps5686;Parent=Thaps5686;rank=1 chr5 . exon 1825418 1825593 . - . ID=Thaps5686.1;Parent=Thaps5686;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1826583 1828203 . + . ID=Thaps5687;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3L8];external_name=Thaps5687;logic_name=jgi_thaps3 chr5 ensembl transcript 1826583 1828203 . + . ID=Thaps5687;Parent=Thaps5687;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1826583 1827356 . + 0 ID=Thaps5687;Parent=Thaps5687;rank=1 chr5 . exon 1826583 1827356 . + . ID=Thaps5687.1;Parent=Thaps5687;constitutive=1;rank=1 chr5 . CDS 1827442 1828203 . + 0 ID=Thaps5687;Parent=Thaps5687;rank=2 chr5 . biological_region 1833495 1833495 0.999 + . logic_name=eponine chr5 ensembl gene 1835655 1836472 . - . ID=Thaps262616;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr5 ensembl transcript 1835655 1836472 . - . ID=Thaps262616;Parent=Thaps262616;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr5 . exon 1835655 1836307 . - . ID=Thaps262616.2;Parent=Thaps262616;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 1836392 1836472 . - . ID=Thaps262616.1;Parent=Thaps262616;constitutive=1;rank=1 chr5 . exon 1827442 1828203 . + . ID=Thaps5687.2;Parent=Thaps5687;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1829287 1830810 . + . ID=Thaps5688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3L9];external_name=Thaps5688;logic_name=jgi_thaps3 chr5 ensembl transcript 1829287 1830810 . + . ID=Thaps5688;Parent=Thaps5688;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1829287 1830810 . + 0 ID=Thaps5688;Parent=Thaps5688;rank=1 chr5 . exon 1829287 1830810 . + . ID=Thaps5688.1;Parent=Thaps5688;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1831751 1833649 . - . ID=Thaps5689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M0];external_name=Thaps5689;logic_name=jgi_thaps3 chr5 ensembl transcript 1831751 1833649 . - . ID=Thaps5689;Parent=Thaps5689;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1831751 1833649 . - 0 ID=Thaps5689;Parent=Thaps5689;rank=1 chr5 . exon 1831751 1833649 . - . ID=Thaps5689.1;Parent=Thaps5689;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1833968 1835119 . + . ID=Thaps5690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M1];external_name=Thaps5690;logic_name=jgi_thaps3 chr5 ensembl transcript 1833968 1835119 . + . ID=Thaps5690;Parent=Thaps5690;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1833968 1834275 . + 0 ID=Thaps5690;Parent=Thaps5690;rank=1 chr5 . exon 1833968 1834275 . + . ID=Thaps5690.1;Parent=Thaps5690;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1834352 1834529 . + 0 ID=Thaps5690;Parent=Thaps5690;rank=2 chr5 . exon 1834352 1834529 . + . ID=Thaps5690.2;Parent=Thaps5690;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1834622 1835119 . + 0 ID=Thaps5690;Parent=Thaps5690;rank=3 chr5 . exon 1834622 1835119 . + . ID=Thaps5690.3;Parent=Thaps5690;constitutive=1;rank=3 chr5 . repeat_region 1838794 1838813 . ? . description=trf chr5 . repeat_region 1838794 1838813 . ? . description=dust chr5 . repeat_region 1840279 1840296 . ? . description=dust chr5 . repeat_region 1844023 1844130 . + . description=TE1_TP chr5 ensembl protein_coding_gene 1841561 1852988 . - . ID=Thaps22869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M4];external_name=Thaps22869;logic_name=jgi_thaps3 chr5 ensembl transcript 1841561 1852988 . - . ID=Thaps22869;Parent=Thaps22869;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1841561 1843829 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=11 chr5 . exon 1841561 1843829 . - . ID=Thaps22869.11;Parent=Thaps22869;constitutive=1;ensembl_end_phase=1;rank=11 chr5 . CDS 1844164 1844262 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=10 chr5 . exon 1844164 1844262 . - . ID=Thaps22869.10;Parent=Thaps22869;constitutive=1;rank=10 chr5 . CDS 1844339 1845102 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=9 chr5 . exon 1844339 1845102 . - . ID=Thaps22869.9;Parent=Thaps22869;constitutive=1;ensembl_end_phase=2;rank=9 chr5 . CDS 1845180 1847814 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=8 chr5 . exon 1845180 1847814 . - . ID=Thaps22869.8;Parent=Thaps22869;constitutive=1;ensembl_end_phase=1;rank=8 chr5 . CDS 1848133 1848343 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=7 chr5 . CDS 1848432 1848771 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=6 chr5 . CDS 1848870 1850260 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=5 chr5 . CDS 1850340 1850727 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=4 chr5 . CDS 1850888 1851461 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=3 chr5 . CDS 1851509 1851886 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=2 chr5 . CDS 1852015 1852988 . - 0 ID=Thaps22869;Parent=Thaps22869;rank=1 chr5 ensembl protein_coding_gene 1836897 1837271 . - . ID=Thaps262617;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M2];external_name=MYB21;logic_name=jgi_thaps3 chr5 ensembl transcript 1836897 1837271 . - . ID=Thaps262617;Parent=Thaps262617;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1836897 1837271 . - 0 ID=Thaps262617;Parent=Thaps262617;rank=1 chr5 . exon 1836897 1837271 . - . ID=Thaps262617.1;Parent=Thaps262617;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1840905 1841486 . + . ID=Thaps5692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M3];external_name=Thaps5692;logic_name=jgi_thaps3 chr5 ensembl transcript 1840905 1841486 . + . ID=Thaps5692;Parent=Thaps5692;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1840905 1841486 . + 0 ID=Thaps5692;Parent=Thaps5692;rank=1 chr5 . exon 1840905 1841486 . + . ID=Thaps5692.1;Parent=Thaps5692;constitutive=1;rank=1 chr5 . exon 1848133 1848343 . - . ID=Thaps22869.7;Parent=Thaps22869;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . exon 1848432 1848771 . - . ID=Thaps22869.6;Parent=Thaps22869;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . exon 1848870 1850260 . - . ID=Thaps22869.5;Parent=Thaps22869;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . exon 1850340 1850727 . - . ID=Thaps22869.4;Parent=Thaps22869;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . exon 1850888 1851461 . - . ID=Thaps22869.3;Parent=Thaps22869;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . exon 1851509 1851886 . - . ID=Thaps22869.2;Parent=Thaps22869;constitutive=1;rank=2 chr5 . exon 1852015 1852988 . - . ID=Thaps22869.1;Parent=Thaps22869;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1854244 1855897 . - . ID=Thaps5694;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M5];external_name=Thaps5694;logic_name=jgi_thaps3 chr5 ensembl transcript 1854244 1855897 . - . ID=Thaps5694;Parent=Thaps5694;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1854244 1854696 . - 0 ID=Thaps5694;Parent=Thaps5694;rank=2 chr5 . exon 1854244 1854696 . - . ID=Thaps5694.2;Parent=Thaps5694;constitutive=1;rank=2 chr5 . CDS 1854788 1855897 . - 0 ID=Thaps5694;Parent=Thaps5694;rank=1 chr5 . exon 1854788 1855897 . - . ID=Thaps5694.1;Parent=Thaps5694;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1856396 1857391 . + . ID=Thaps5695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M6];external_name=Thaps5695;logic_name=jgi_thaps3 chr5 ensembl transcript 1856396 1857391 . + . ID=Thaps5695;Parent=Thaps5695;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1856396 1857391 . + 0 ID=Thaps5695;Parent=Thaps5695;rank=1 chr5 . exon 1856396 1857391 . + . ID=Thaps5695.1;Parent=Thaps5695;constitutive=1;rank=1 chr5 . repeat_region 1863398 1863436 . ? . description=dust chr5 . repeat_region 1863398 1863440 . ? . description=trf chr5 . repeat_region 1864252 1864275 . ? . description=trf chr5 . repeat_region 1864252 1864275 . ? . description=dust chr5 . repeat_region 1864515 1864595 . ? . description=dust chr5 . repeat_region 1864524 1864580 . ? . description=trf chr5 . repeat_region 1864524 1864580 . ? . description=trf chr5 . repeat_region 1864552 1864580 . ? . description=trf chr5 . repeat_region 1864613 1864645 . ? . description=dust chr5 . repeat_region 1866323 1866393 . ? . description=trf chr5 ensembl protein_coding_gene 1859963 1861099 . + . ID=Thaps22871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M8];external_name=Thaps22871;logic_name=jgi_thaps3 chr5 ensembl transcript 1859963 1861099 . + . ID=Thaps22871;Parent=Thaps22871;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1859963 1861099 . + 0 ID=Thaps22871;Parent=Thaps22871;rank=1 chr5 . exon 1859963 1861099 . + . ID=Thaps22871.1;Parent=Thaps22871;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1858037 1858876 . - . ID=Thaps40826;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M7];external_name=Thaps40826;logic_name=jgi_thaps3 chr5 ensembl transcript 1858037 1858876 . - . ID=Thaps40826;Parent=Thaps40826;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1858037 1858876 . - 0 ID=Thaps40826;Parent=Thaps40826;rank=1 chr5 . exon 1858037 1858876 . - . ID=Thaps40826.1;Parent=Thaps40826;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1861579 1864611 . - . ID=Thaps5698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3M9];external_name=Thaps5698;logic_name=jgi_thaps3 chr5 ensembl transcript 1861579 1864611 . - . ID=Thaps5698;Parent=Thaps5698;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1861579 1861750 . - 0 ID=Thaps5698;Parent=Thaps5698;rank=4 chr5 . exon 1861579 1861750 . - . ID=Thaps5698.4;Parent=Thaps5698;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1861789 1862748 . - 0 ID=Thaps5698;Parent=Thaps5698;rank=3 chr5 . exon 1861789 1862748 . - . ID=Thaps5698.3;Parent=Thaps5698;constitutive=1;rank=3 chr5 . CDS 1862843 1862883 . - 0 ID=Thaps5698;Parent=Thaps5698;rank=2 chr5 . exon 1862843 1862883 . - . ID=Thaps5698.2;Parent=Thaps5698;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1862977 1864611 . - 0 ID=Thaps5698;Parent=Thaps5698;rank=1 chr5 . exon 1862977 1864611 . - . ID=Thaps5698.1;Parent=Thaps5698;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1864871 1866415 . + . ID=Thaps5699;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N0];external_name=Thaps5699;logic_name=jgi_thaps3 chr5 ensembl transcript 1864871 1866415 . + . ID=Thaps5699;Parent=Thaps5699;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1864871 1865805 . + 0 ID=Thaps5699;Parent=Thaps5699;rank=1 chr5 . exon 1864871 1865805 . + . ID=Thaps5699.1;Parent=Thaps5699;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1866190 1866415 . + 0 ID=Thaps5699;Parent=Thaps5699;rank=2 chr5 . exon 1866190 1866415 . + . ID=Thaps5699.2;Parent=Thaps5699;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1875033 1878290 . - . ID=Thaps22874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N3];external_name=Thaps22874;logic_name=jgi_thaps3 chr5 ensembl transcript 1875033 1878290 . - . ID=Thaps22874;Parent=Thaps22874;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1875033 1878290 . - 0 ID=Thaps22874;Parent=Thaps22874;rank=1 chr5 . exon 1875033 1878290 . - . ID=Thaps22874.1;Parent=Thaps22874;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1869476 1871546 . + . ID=Thaps262619;biotype=protein_coding;description=Spindle pole component spc97-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N1];external_name=Thaps262619;logic_name=jgi_thaps3 chr5 ensembl transcript 1869476 1871546 . + . ID=Thaps262619;Parent=Thaps262619;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1869476 1869967 . + 0 ID=Thaps262619;Parent=Thaps262619;rank=1 chr5 . exon 1869476 1869967 . + . ID=Thaps262619.1;Parent=Thaps262619;constitutive=1;rank=1 chr5 . CDS 1870010 1871546 . + 0 ID=Thaps262619;Parent=Thaps262619;rank=2 chr5 . exon 1870010 1871546 . + . ID=Thaps262619.2;Parent=Thaps262619;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1871866 1872381 . - . ID=Thaps5701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N2];external_name=Thaps5701;logic_name=jgi_thaps3 chr5 ensembl transcript 1871866 1872381 . - . ID=Thaps5701;Parent=Thaps5701;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1871866 1872381 . - 0 ID=Thaps5701;Parent=Thaps5701;rank=1 chr5 . exon 1871866 1872381 . - . ID=Thaps5701.1;Parent=Thaps5701;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1879099 1880007 . + . ID=Thaps22875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N4];external_name=Thaps22875;logic_name=jgi_thaps3 chr5 ensembl transcript 1879099 1880007 . + . ID=Thaps22875;Parent=Thaps22875;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1879099 1880007 . + 0 ID=Thaps22875;Parent=Thaps22875;rank=1 chr5 . exon 1879099 1880007 . + . ID=Thaps22875.1;Parent=Thaps22875;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1880218 1881807 . - . ID=Thaps22876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N5];external_name=Thaps22876;logic_name=jgi_thaps3 chr5 ensembl transcript 1880218 1881807 . - . ID=Thaps22876;Parent=Thaps22876;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1880218 1881807 . - 0 ID=Thaps22876;Parent=Thaps22876;rank=1 chr5 . exon 1880218 1881807 . - . ID=Thaps22876.1;Parent=Thaps22876;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1886506 1886925 . + . ID=Thaps262620;biotype=protein_coding;description=Ankyrin domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N7];external_name=Thaps262620;logic_name=jgi_thaps3 chr5 ensembl transcript 1886506 1886925 . + . ID=Thaps262620;Parent=Thaps262620;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1886506 1886925 . + 0 ID=Thaps262620;Parent=Thaps262620;rank=1 chr5 . exon 1886506 1886925 . + . ID=Thaps262620.1;Parent=Thaps262620;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1882206 1885479 . + . ID=Thaps5706;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N6];external_name=Thaps5706;logic_name=jgi_thaps3 chr5 ensembl transcript 1882206 1885479 . + . ID=Thaps5706;Parent=Thaps5706;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1882206 1883269 . + 0 ID=Thaps5706;Parent=Thaps5706;rank=1 chr5 . exon 1882206 1883269 . + . ID=Thaps5706.1;Parent=Thaps5706;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1883397 1883505 . + 0 ID=Thaps5706;Parent=Thaps5706;rank=2 chr5 . exon 1883397 1883505 . + . ID=Thaps5706.2;Parent=Thaps5706;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1883616 1883919 . + 0 ID=Thaps5706;Parent=Thaps5706;rank=3 chr5 . exon 1883616 1883919 . + . ID=Thaps5706.3;Parent=Thaps5706;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1884083 1884678 . + 0 ID=Thaps5706;Parent=Thaps5706;rank=4 chr5 . exon 1884083 1884678 . + . ID=Thaps5706.4;Parent=Thaps5706;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 1884751 1885479 . + 0 ID=Thaps5706;Parent=Thaps5706;rank=5 chr5 . exon 1884751 1885479 . + . ID=Thaps5706.5;Parent=Thaps5706;constitutive=1;rank=5 chr5 . repeat_region 1888926 1888971 . + . description=TE2c_TP chr5 . repeat_region 1888949 1889005 . - . description=TE2c_TP chr5 ensembl protein_coding_gene 1889166 1890142 . - . ID=Thaps22877;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N9];external_name=Thaps22877;logic_name=jgi_thaps3 chr5 ensembl transcript 1889166 1890142 . - . ID=Thaps22877;Parent=Thaps22877;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1889166 1889577 . - 0 ID=Thaps22877;Parent=Thaps22877;rank=3 chr5 . exon 1889166 1889577 . - . ID=Thaps22877.3;Parent=Thaps22877;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1889650 1889713 . - 0 ID=Thaps22877;Parent=Thaps22877;rank=2 chr5 . exon 1889650 1889713 . - . ID=Thaps22877.2;Parent=Thaps22877;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1889815 1890142 . - 0 ID=Thaps22877;Parent=Thaps22877;rank=1 chr5 . exon 1889815 1890142 . - . ID=Thaps22877.1;Parent=Thaps22877;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1894115 1895902 . + . ID=Thaps22879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3P2];external_name=Thaps22879;logic_name=jgi_thaps3 chr5 ensembl transcript 1894115 1895902 . + . ID=Thaps22879;Parent=Thaps22879;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1894115 1895902 . + 0 ID=Thaps22879;Parent=Thaps22879;rank=1 chr5 . exon 1894115 1895902 . + . ID=Thaps22879.1;Parent=Thaps22879;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1890778 1891996 . + . ID=Thaps28410;biotype=protein_coding;description=Phospholipase [Source:UniProtKB/TrEMBL%3BAcc:B8C3P0];external_name=Thaps28410;logic_name=jgi_thaps3 chr5 ensembl transcript 1890778 1891996 . + . ID=Thaps28410;Parent=Thaps28410;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1890778 1891125 . + 0 ID=Thaps28410;Parent=Thaps28410;rank=1 chr5 . exon 1890778 1891125 . + . ID=Thaps28410.1;Parent=Thaps28410;constitutive=1;rank=1 chr5 . CDS 1891215 1891316 . + 0 ID=Thaps28410;Parent=Thaps28410;rank=2 chr5 . exon 1891215 1891316 . + . ID=Thaps28410.2;Parent=Thaps28410;constitutive=1;rank=2 chr5 . CDS 1891394 1891600 . + 0 ID=Thaps28410;Parent=Thaps28410;rank=3 chr5 . exon 1891394 1891600 . + . ID=Thaps28410.3;Parent=Thaps28410;constitutive=1;rank=3 chr5 . CDS 1891676 1891829 . + 0 ID=Thaps28410;Parent=Thaps28410;rank=4 chr5 . exon 1891676 1891829 . + . ID=Thaps28410.4;Parent=Thaps28410;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1891905 1891996 . + 0 ID=Thaps28410;Parent=Thaps28410;rank=5 chr5 . exon 1891905 1891996 . + . ID=Thaps28410.5;Parent=Thaps28410;constitutive=1;ensembl_end_phase=2;rank=5 chr5 ensembl protein_coding_gene 1887134 1888633 . - . ID=Thaps5708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3N8];external_name=Thaps5708;logic_name=jgi_thaps3 chr5 ensembl transcript 1887134 1888633 . - . ID=Thaps5708;Parent=Thaps5708;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1887134 1888633 . - 0 ID=Thaps5708;Parent=Thaps5708;rank=1 chr5 . exon 1887134 1888633 . - . ID=Thaps5708.1;Parent=Thaps5708;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1892819 1893582 . + . ID=Thaps5711;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3P1];external_name=Thaps5711;logic_name=jgi_thaps3 chr5 ensembl transcript 1892819 1893582 . + . ID=Thaps5711;Parent=Thaps5711;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1892819 1893451 . + 0 ID=Thaps5711;Parent=Thaps5711;rank=1 chr5 . exon 1892819 1893451 . + . ID=Thaps5711.1;Parent=Thaps5711;constitutive=1;rank=1 chr5 . CDS 1893544 1893582 . + 0 ID=Thaps5711;Parent=Thaps5711;rank=2 chr5 . exon 1893544 1893582 . + . ID=Thaps5711.2;Parent=Thaps5711;constitutive=1;rank=2 chr5 . repeat_region 1897153 1897249 . ? . description=trf chr5 . biological_region 1902622 1902624 0.999 + . logic_name=eponine chr5 . repeat_region 1902634 1902675 . ? . description=trf chr5 ensembl protein_coding_gene 1898109 1898720 . - . ID=Thaps22880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3P4];external_name=Thaps22880;logic_name=jgi_thaps3 chr5 ensembl transcript 1898109 1898720 . - . ID=Thaps22880;Parent=Thaps22880;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1898109 1898720 . - 0 ID=Thaps22880;Parent=Thaps22880;rank=1 chr5 . exon 1898109 1898720 . - . ID=Thaps22880.1;Parent=Thaps22880;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1904738 1911416 . - . ID=Thaps22882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3P9];external_name=Thaps22882;logic_name=jgi_thaps3 chr5 ensembl transcript 1904738 1911416 . - . ID=Thaps22882;Parent=Thaps22882;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1904738 1904846 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=10 chr5 . exon 1904738 1904846 . - . ID=Thaps22882.10;Parent=Thaps22882;constitutive=1;ensembl_end_phase=1;rank=10 chr5 . CDS 1904933 1905000 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=9 chr5 . exon 1904933 1905000 . - . ID=Thaps22882.9;Parent=Thaps22882;constitutive=1;ensembl_end_phase=2;rank=9 chr5 . CDS 1905082 1905428 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=8 chr5 . exon 1905082 1905428 . - . ID=Thaps22882.8;Parent=Thaps22882;constitutive=1;ensembl_end_phase=2;rank=8 chr5 . CDS 1905513 1906367 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=7 chr5 . exon 1905513 1906367 . - . ID=Thaps22882.7;Parent=Thaps22882;constitutive=1;rank=7 chr5 . CDS 1906531 1906958 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=6 chr5 . exon 1906531 1906958 . - . ID=Thaps22882.6;Parent=Thaps22882;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 1907048 1907875 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=5 chr5 . CDS 1907955 1908117 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=4 chr5 . CDS 1908187 1908328 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=3 chr5 . CDS 1908450 1909393 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=2 chr5 . CDS 1909496 1911416 . - 0 ID=Thaps22882;Parent=Thaps22882;rank=1 chr5 ensembl protein_coding_gene 1900575 1902042 . + . ID=Thaps28413;biotype=protein_coding;description=Glycosyl hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8C3P6];external_name=Thaps28413;logic_name=jgi_thaps3 chr5 ensembl transcript 1900575 1902042 . + . ID=Thaps28413;Parent=Thaps28413;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1900575 1900772 . + 0 ID=Thaps28413;Parent=Thaps28413;rank=1 chr5 . exon 1900575 1900772 . + . ID=Thaps28413.1;Parent=Thaps28413;constitutive=1;rank=1 chr5 . CDS 1900809 1901827 . + 0 ID=Thaps28413;Parent=Thaps28413;rank=2 chr5 . exon 1900809 1901827 . + . ID=Thaps28413.2;Parent=Thaps28413;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1901907 1902042 . + 0 ID=Thaps28413;Parent=Thaps28413;rank=3 chr5 . exon 1901907 1902042 . + . ID=Thaps28413.3;Parent=Thaps28413;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 1903391 1904453 . + . ID=Thaps34042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3P8];external_name=Thaps34042;logic_name=jgi_thaps3 chr5 ensembl transcript 1903391 1904453 . + . ID=Thaps34042;Parent=Thaps34042;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1903391 1904029 . + 0 ID=Thaps34042;Parent=Thaps34042;rank=1 chr5 . exon 1903391 1904029 . + . ID=Thaps34042.1;Parent=Thaps34042;constitutive=1;rank=1 chr5 . CDS 1904116 1904269 . + 0 ID=Thaps34042;Parent=Thaps34042;rank=2 chr5 . exon 1904116 1904269 . + . ID=Thaps34042.2;Parent=Thaps34042;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1904362 1904453 . + 0 ID=Thaps34042;Parent=Thaps34042;rank=3 chr5 . exon 1904362 1904453 . + . ID=Thaps34042.3;Parent=Thaps34042;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 1897084 1897803 . + . ID=Thaps5713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3P3];external_name=Thaps5713;logic_name=jgi_thaps3 chr5 ensembl transcript 1897084 1897803 . + . ID=Thaps5713;Parent=Thaps5713;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1897084 1897803 . + 0 ID=Thaps5713;Parent=Thaps5713;rank=1 chr5 . exon 1897084 1897803 . + . ID=Thaps5713.1;Parent=Thaps5713;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1898861 1899992 . + . ID=Thaps5715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3P5];external_name=Thaps5715;logic_name=jgi_thaps3 chr5 ensembl transcript 1898861 1899992 . + . ID=Thaps5715;Parent=Thaps5715;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1898861 1898974 . + 0 ID=Thaps5715;Parent=Thaps5715;rank=1 chr5 . exon 1898861 1898974 . + . ID=Thaps5715.1;Parent=Thaps5715;constitutive=1;rank=1 chr5 . CDS 1899111 1899218 . + 0 ID=Thaps5715;Parent=Thaps5715;rank=2 chr5 . exon 1899111 1899218 . + . ID=Thaps5715.2;Parent=Thaps5715;constitutive=1;rank=2 chr5 . CDS 1899391 1899502 . + 0 ID=Thaps5715;Parent=Thaps5715;rank=3 chr5 . exon 1899391 1899502 . + . ID=Thaps5715.3;Parent=Thaps5715;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1899588 1899642 . + 0 ID=Thaps5715;Parent=Thaps5715;rank=4 chr5 . exon 1899588 1899642 . + . ID=Thaps5715.4;Parent=Thaps5715;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1899710 1899992 . + 0 ID=Thaps5715;Parent=Thaps5715;rank=5 chr5 . exon 1899710 1899992 . + . ID=Thaps5715.5;Parent=Thaps5715;constitutive=1;ensembl_end_phase=1;rank=5 chr5 ensembl protein_coding_gene 1902174 1902836 . - . ID=Thaps5717;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3P7];external_name=Thaps5717;logic_name=jgi_thaps3 chr5 ensembl transcript 1902174 1902836 . - . ID=Thaps5717;Parent=Thaps5717;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1902174 1902836 . - 0 ID=Thaps5717;Parent=Thaps5717;rank=1 chr5 . exon 1902174 1902836 . - . ID=Thaps5717.1;Parent=Thaps5717;constitutive=1;rank=1 chr5 . exon 1907048 1907875 . - . ID=Thaps22882.5;Parent=Thaps22882;constitutive=1;rank=5 chr5 . exon 1907955 1908117 . - . ID=Thaps22882.4;Parent=Thaps22882;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . exon 1908187 1908328 . - . ID=Thaps22882.3;Parent=Thaps22882;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . exon 1908450 1909393 . - . ID=Thaps22882.2;Parent=Thaps22882;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 1909496 1911416 . - . ID=Thaps22882.1;Parent=Thaps22882;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1911703 1917061 . + . ID=Thaps22883;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q0];external_name=Thaps22883;logic_name=jgi_thaps3 chr5 ensembl transcript 1911703 1917061 . + . ID=Thaps22883;Parent=Thaps22883;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1911703 1912662 . + 0 ID=Thaps22883;Parent=Thaps22883;rank=1 chr5 . exon 1911703 1912662 . + . ID=Thaps22883.1;Parent=Thaps22883;constitutive=1;rank=1 chr5 . CDS 1912699 1913065 . + 0 ID=Thaps22883;Parent=Thaps22883;rank=2 chr5 . exon 1912699 1913065 . + . ID=Thaps22883.2;Parent=Thaps22883;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1913673 1913834 . + 0 ID=Thaps22883;Parent=Thaps22883;rank=3 chr5 . exon 1913673 1913834 . + . ID=Thaps22883.3;Parent=Thaps22883;constitutive=1;rank=3 chr5 . CDS 1913908 1915869 . + 0 ID=Thaps22883;Parent=Thaps22883;rank=4 chr5 . exon 1913908 1915869 . + . ID=Thaps22883.4;Parent=Thaps22883;constitutive=1;rank=4 chr5 . CDS 1915947 1916829 . + 0 ID=Thaps22883;Parent=Thaps22883;rank=5 chr5 . exon 1915947 1916829 . + . ID=Thaps22883.5;Parent=Thaps22883;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1916902 1917061 . + 0 ID=Thaps22883;Parent=Thaps22883;rank=6 chr5 . repeat_region 1917826 1917833 . ? . description=dust chr5 ensembl protein_coding_gene 1921291 1924350 . + . ID=Thaps12403;biotype=protein_coding;description=Atpase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q3];external_name=Thaps12403;logic_name=jgi_thaps3 chr5 ensembl transcript 1921291 1924350 . + . ID=Thaps12403;Parent=Thaps12403;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1921291 1922155 . + 0 ID=Thaps12403;Parent=Thaps12403;rank=1 chr5 . exon 1921291 1922155 . + . ID=Thaps12403.1;Parent=Thaps12403;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1922237 1922594 . + 0 ID=Thaps12403;Parent=Thaps12403;rank=2 chr5 . exon 1922237 1922594 . + . ID=Thaps12403.2;Parent=Thaps12403;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1922679 1923368 . + 0 ID=Thaps12403;Parent=Thaps12403;rank=3 chr5 . exon 1922679 1923368 . + . ID=Thaps12403.3;Parent=Thaps12403;constitutive=1;rank=3 chr5 . CDS 1923423 1923726 . + 0 ID=Thaps12403;Parent=Thaps12403;rank=4 chr5 . exon 1923423 1923726 . + . ID=Thaps12403.4;Parent=Thaps12403;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1923806 1923859 . + 0 ID=Thaps12403;Parent=Thaps12403;rank=5 chr5 . exon 1923806 1923859 . + . ID=Thaps12403.5;Parent=Thaps12403;constitutive=1;rank=5 chr5 . CDS 1923932 1924174 . + 0 ID=Thaps12403;Parent=Thaps12403;rank=6 chr5 . exon 1923932 1924174 . + . ID=Thaps12403.6;Parent=Thaps12403;constitutive=1;rank=6 chr5 . CDS 1924246 1924350 . + 0 ID=Thaps12403;Parent=Thaps12403;rank=7 chr5 . exon 1924246 1924350 . + . ID=Thaps12403.7;Parent=Thaps12403;constitutive=1;rank=7 chr5 . exon 1916902 1917061 . + . ID=Thaps22883.6;Parent=Thaps22883;constitutive=1;ensembl_end_phase=1;rank=6 chr5 ensembl protein_coding_gene 1918592 1919884 . - . ID=Thaps40831;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q1];external_name=Thaps40831;logic_name=jgi_thaps3 chr5 ensembl transcript 1918592 1919884 . - . ID=Thaps40831;Parent=Thaps40831;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1918592 1918600 . - 0 ID=Thaps40831;Parent=Thaps40831;rank=4 chr5 . exon 1918592 1918600 . - . ID=Thaps40831.4;Parent=Thaps40831;constitutive=1;rank=4 chr5 . CDS 1918687 1918761 . - 0 ID=Thaps40831;Parent=Thaps40831;rank=3 chr5 . exon 1918687 1918761 . - . ID=Thaps40831.3;Parent=Thaps40831;constitutive=1;rank=3 chr5 . CDS 1918852 1919625 . - 0 ID=Thaps40831;Parent=Thaps40831;rank=2 chr5 . exon 1918852 1919625 . - . ID=Thaps40831.2;Parent=Thaps40831;constitutive=1;rank=2 chr5 . CDS 1919768 1919884 . - 0 ID=Thaps40831;Parent=Thaps40831;rank=1 chr5 . exon 1919768 1919884 . - . ID=Thaps40831.1;Parent=Thaps40831;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1920056 1920993 . + . ID=Thaps5722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q2];external_name=Thaps5722;logic_name=jgi_thaps3 chr5 ensembl transcript 1920056 1920993 . + . ID=Thaps5722;Parent=Thaps5722;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1920056 1920161 . + 0 ID=Thaps5722;Parent=Thaps5722;rank=1 chr5 . exon 1920056 1920161 . + . ID=Thaps5722.1;Parent=Thaps5722;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1920303 1920735 . + 0 ID=Thaps5722;Parent=Thaps5722;rank=2 chr5 . exon 1920303 1920735 . + . ID=Thaps5722.2;Parent=Thaps5722;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1920846 1920993 . + 0 ID=Thaps5722;Parent=Thaps5722;rank=3 chr5 . exon 1920846 1920993 . + . ID=Thaps5722.3;Parent=Thaps5722;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 1924906 1927619 . + . ID=Thaps5725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q4];external_name=Thaps5725;logic_name=jgi_thaps3 chr5 ensembl transcript 1924906 1927619 . + . ID=Thaps5725;Parent=Thaps5725;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1924906 1926012 . + 0 ID=Thaps5725;Parent=Thaps5725;rank=1 chr5 . exon 1924906 1926012 . + . ID=Thaps5725.1;Parent=Thaps5725;constitutive=1;rank=1 chr5 . CDS 1926097 1926722 . + 0 ID=Thaps5725;Parent=Thaps5725;rank=2 chr5 . exon 1926097 1926722 . + . ID=Thaps5725.2;Parent=Thaps5725;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1926865 1927006 . + 0 ID=Thaps5725;Parent=Thaps5725;rank=3 chr5 . CDS 1927080 1927619 . + 0 ID=Thaps5725;Parent=Thaps5725;rank=4 chr5 . repeat_region 1934193 1934220 . ? . description=trf chr5 ensembl protein_coding_gene 1927744 1932832 . - . ID=Thaps22886;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q5];external_name=Thaps22886;logic_name=jgi_thaps3 chr5 ensembl transcript 1927744 1932832 . - . ID=Thaps22886;Parent=Thaps22886;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1927744 1927938 . - 0 ID=Thaps22886;Parent=Thaps22886;rank=5 chr5 . exon 1927744 1927938 . - . ID=Thaps22886.5;Parent=Thaps22886;constitutive=1;rank=5 chr5 . CDS 1928025 1930109 . - 0 ID=Thaps22886;Parent=Thaps22886;rank=4 chr5 . exon 1928025 1930109 . - . ID=Thaps22886.4;Parent=Thaps22886;constitutive=1;rank=4 chr5 . CDS 1930198 1931733 . - 0 ID=Thaps22886;Parent=Thaps22886;rank=3 chr5 . exon 1930198 1931733 . - . ID=Thaps22886.3;Parent=Thaps22886;constitutive=1;rank=3 chr5 . CDS 1931825 1931975 . - 0 ID=Thaps22886;Parent=Thaps22886;rank=2 chr5 . exon 1931825 1931975 . - . ID=Thaps22886.2;Parent=Thaps22886;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 1932012 1932832 . - 0 ID=Thaps22886;Parent=Thaps22886;rank=1 chr5 . exon 1932012 1932832 . - . ID=Thaps22886.1;Parent=Thaps22886;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 1933401 1934123 . - . ID=Thaps34379;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q6];external_name=Thaps34379;logic_name=jgi_thaps3 chr5 ensembl transcript 1933401 1934123 . - . ID=Thaps34379;Parent=Thaps34379;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1933401 1933702 . - 0 ID=Thaps34379;Parent=Thaps34379;rank=2 chr5 . exon 1933401 1933702 . - . ID=Thaps34379.2;Parent=Thaps34379;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1933835 1934123 . - 0 ID=Thaps34379;Parent=Thaps34379;rank=1 chr5 . exon 1933835 1934123 . - . ID=Thaps34379.1;Parent=Thaps34379;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . exon 1926865 1927006 . + . ID=Thaps5725.3;Parent=Thaps5725;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . exon 1927080 1927619 . + . ID=Thaps5725.4;Parent=Thaps5725;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 1936196 1938981 . + . ID=Thaps5728;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q7];external_name=Thaps5728;logic_name=jgi_thaps3 chr5 ensembl transcript 1936196 1938981 . + . ID=Thaps5728;Parent=Thaps5728;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1936196 1938098 . + 0 ID=Thaps5728;Parent=Thaps5728;rank=1 chr5 . exon 1936196 1938098 . + . ID=Thaps5728.1;Parent=Thaps5728;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1938178 1938615 . + 0 ID=Thaps5728;Parent=Thaps5728;rank=2 chr5 . CDS 1938693 1938763 . + 0 ID=Thaps5728;Parent=Thaps5728;rank=3 chr5 . CDS 1938844 1938981 . + 0 ID=Thaps5728;Parent=Thaps5728;rank=4 chr5 . repeat_region 1940247 1940255 . ? . description=dust chr5 ensembl protein_coding_gene 1942289 1944370 . - . ID=Thaps22887;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3R0];external_name=Thaps22887;logic_name=jgi_thaps3 chr5 ensembl transcript 1942289 1944370 . - . ID=Thaps22887;Parent=Thaps22887;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1942289 1944370 . - 0 ID=Thaps22887;Parent=Thaps22887;rank=1 chr5 . exon 1942289 1944370 . - . ID=Thaps22887.1;Parent=Thaps22887;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1944918 1945803 . + . ID=Thaps34219;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3R1];external_name=Thaps34219;logic_name=jgi_thaps3 chr5 ensembl transcript 1944918 1945803 . + . ID=Thaps34219;Parent=Thaps34219;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1944918 1945102 . + 0 ID=Thaps34219;Parent=Thaps34219;rank=1 chr5 . exon 1944918 1945102 . + . ID=Thaps34219.1;Parent=Thaps34219;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1945443 1945803 . + 0 ID=Thaps34219;Parent=Thaps34219;rank=2 chr5 . exon 1945443 1945803 . + . ID=Thaps34219.2;Parent=Thaps34219;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1939630 1940028 . + . ID=Thaps34560;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q8];external_name=Thaps34560;logic_name=jgi_thaps3 chr5 ensembl transcript 1939630 1940028 . + . ID=Thaps34560;Parent=Thaps34560;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1939630 1940028 . + 0 ID=Thaps34560;Parent=Thaps34560;rank=1 chr5 . exon 1939630 1940028 . + . ID=Thaps34560.1;Parent=Thaps34560;constitutive=1;rank=1 chr5 . exon 1938178 1938615 . + . ID=Thaps5728.2;Parent=Thaps5728;constitutive=1;rank=2 chr5 . exon 1938693 1938763 . + . ID=Thaps5728.3;Parent=Thaps5728;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . exon 1938844 1938981 . + . ID=Thaps5728.4;Parent=Thaps5728;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 1941221 1941860 . + . ID=Thaps5729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Q9];external_name=Thaps5729;logic_name=jgi_thaps3 chr5 ensembl transcript 1941221 1941860 . + . ID=Thaps5729;Parent=Thaps5729;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1941221 1941579 . + 0 ID=Thaps5729;Parent=Thaps5729;rank=1 chr5 . exon 1941221 1941579 . + . ID=Thaps5729.1;Parent=Thaps5729;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1941677 1941860 . + 0 ID=Thaps5729;Parent=Thaps5729;rank=2 chr5 . exon 1941677 1941860 . + . ID=Thaps5729.2;Parent=Thaps5729;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . repeat_region 1947238 1947286 . ? . description=trf chr5 ensembl protein_coding_gene 1947599 1949053 . - . ID=Thaps22888;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3R2];external_name=Thaps22888;logic_name=jgi_thaps3 chr5 ensembl transcript 1947599 1949053 . - . ID=Thaps22888;Parent=Thaps22888;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1947599 1949053 . - 0 ID=Thaps22888;Parent=Thaps22888;rank=1 chr5 . exon 1947599 1949053 . - . ID=Thaps22888.1;Parent=Thaps22888;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1949515 1951141 . - . ID=Thaps22889;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3R3];external_name=Thaps22889;logic_name=jgi_thaps3 chr5 ensembl transcript 1949515 1951141 . - . ID=Thaps22889;Parent=Thaps22889;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1949515 1949717 . - 0 ID=Thaps22889;Parent=Thaps22889;rank=2 chr5 . exon 1949515 1949717 . - . ID=Thaps22889.2;Parent=Thaps22889;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1949809 1951141 . - 0 ID=Thaps22889;Parent=Thaps22889;rank=1 chr5 . exon 1949809 1951141 . - . ID=Thaps22889.1;Parent=Thaps22889;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1952661 1953935 . - . ID=Thaps22890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3R5];external_name=Thaps22890;logic_name=jgi_thaps3 chr5 ensembl transcript 1952661 1953935 . - . ID=Thaps22890;Parent=Thaps22890;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1952661 1953935 . - 0 ID=Thaps22890;Parent=Thaps22890;rank=1 chr5 . exon 1952661 1953935 . - . ID=Thaps22890.1;Parent=Thaps22890;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1956532 1958961 . + . ID=Thaps22891;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3R7];external_name=Thaps22891;logic_name=jgi_thaps3 chr5 ensembl transcript 1956532 1958961 . + . ID=Thaps22891;Parent=Thaps22891;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1956532 1957705 . + 0 ID=Thaps22891;Parent=Thaps22891;rank=1 chr5 . exon 1956532 1957705 . + . ID=Thaps22891.1;Parent=Thaps22891;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1957790 1958961 . + 0 ID=Thaps22891;Parent=Thaps22891;rank=2 chr5 ensembl protein_coding_gene 1954317 1956169 . + . ID=Thaps262625;biotype=protein_coding;description=Glutamyl-trna amidotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C3R6];external_name=Thaps262625;logic_name=jgi_thaps3 chr5 ensembl transcript 1954317 1956169 . + . ID=Thaps262625;Parent=Thaps262625;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1954317 1954680 . + 0 ID=Thaps262625;Parent=Thaps262625;rank=1 chr5 . exon 1954317 1954680 . + . ID=Thaps262625.1;Parent=Thaps262625;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1954825 1954883 . + 0 ID=Thaps262625;Parent=Thaps262625;rank=2 chr5 . exon 1954825 1954883 . + . ID=Thaps262625.2;Parent=Thaps262625;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1954932 1955105 . + 0 ID=Thaps262625;Parent=Thaps262625;rank=3 chr5 . exon 1954932 1955105 . + . ID=Thaps262625.3;Parent=Thaps262625;constitutive=1;rank=3 chr5 . CDS 1955162 1955621 . + 0 ID=Thaps262625;Parent=Thaps262625;rank=4 chr5 . exon 1955162 1955621 . + . ID=Thaps262625.4;Parent=Thaps262625;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1955664 1955744 . + 0 ID=Thaps262625;Parent=Thaps262625;rank=5 chr5 . exon 1955664 1955744 . + . ID=Thaps262625.5;Parent=Thaps262625;constitutive=1;rank=5 chr5 . CDS 1955793 1956169 . + 0 ID=Thaps262625;Parent=Thaps262625;rank=6 chr5 . exon 1955793 1956169 . + . ID=Thaps262625.6;Parent=Thaps262625;constitutive=1;ensembl_end_phase=2;rank=6 chr5 ensembl protein_coding_gene 1951380 1952265 . + . ID=Thaps5734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3R4];external_name=Thaps5734;logic_name=jgi_thaps3 chr5 ensembl transcript 1951380 1952265 . + . ID=Thaps5734;Parent=Thaps5734;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1951380 1951719 . + 0 ID=Thaps5734;Parent=Thaps5734;rank=1 chr5 . exon 1951380 1951719 . + . ID=Thaps5734.1;Parent=Thaps5734;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1951884 1952095 . + 0 ID=Thaps5734;Parent=Thaps5734;rank=2 chr5 . exon 1951884 1952095 . + . ID=Thaps5734.2;Parent=Thaps5734;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1952239 1952265 . + 0 ID=Thaps5734;Parent=Thaps5734;rank=3 chr5 . exon 1952239 1952265 . + . ID=Thaps5734.3;Parent=Thaps5734;constitutive=1;rank=3 chr5 . biological_region 1964613 1964614 0.999 + . logic_name=eponine chr5 ensembl protein_coding_gene 1960231 1960605 . + . ID=Thaps19793;biotype=protein_coding;description=Histone H2A [Source:UniProtKB/TrEMBL%3BAcc:B8C3R9];external_name=Thaps19793;logic_name=jgi_thaps3 chr5 ensembl transcript 1960231 1960605 . + . ID=Thaps19793;Parent=Thaps19793;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1960231 1960605 . + 0 ID=Thaps19793;Parent=Thaps19793;rank=1 chr5 . exon 1960231 1960605 . + . ID=Thaps19793.1;Parent=Thaps19793;constitutive=1;rank=1 chr5 . exon 1957790 1958961 . + . ID=Thaps22891.2;Parent=Thaps22891;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 1961151 1961752 . - . ID=Thaps262630;biotype=protein_coding;description=Dnaj-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3S0];external_name=Thaps262630;logic_name=jgi_thaps3 chr5 ensembl transcript 1961151 1961752 . - . ID=Thaps262630;Parent=Thaps262630;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1961151 1961330 . - 0 ID=Thaps262630;Parent=Thaps262630;rank=4 chr5 . exon 1961151 1961330 . - . ID=Thaps262630.4;Parent=Thaps262630;constitutive=1;rank=4 chr5 . CDS 1961446 1961455 . - 0 ID=Thaps262630;Parent=Thaps262630;rank=3 chr5 . exon 1961446 1961455 . - . ID=Thaps262630.3;Parent=Thaps262630;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1961548 1961577 . - 0 ID=Thaps262630;Parent=Thaps262630;rank=2 chr5 . exon 1961548 1961577 . - . ID=Thaps262630.2;Parent=Thaps262630;constitutive=1;rank=2 chr5 . CDS 1961687 1961752 . - 0 ID=Thaps262630;Parent=Thaps262630;rank=1 chr5 . exon 1961687 1961752 . - . ID=Thaps262630.1;Parent=Thaps262630;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1962676 1963170 . - . ID=Thaps262632;biotype=protein_coding;description=Beta-1%2C4-galactosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C3S1];external_name=Thaps262632;logic_name=jgi_thaps3 chr5 ensembl transcript 1962676 1963170 . - . ID=Thaps262632;Parent=Thaps262632;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1962676 1963053 . - 0 ID=Thaps262632;Parent=Thaps262632;rank=2 chr5 . exon 1962676 1963053 . - . ID=Thaps262632.2;Parent=Thaps262632;constitutive=1;rank=2 chr5 . CDS 1963069 1963170 . - 0 ID=Thaps262632;Parent=Thaps262632;rank=1 chr5 . exon 1963069 1963170 . - . ID=Thaps262632.1;Parent=Thaps262632;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1959534 1959896 . - . ID=Thaps34210;biotype=protein_coding;description=Histone H2B [Source:UniProtKB/TrEMBL%3BAcc:B5YMW8];external_name=Thaps34210;logic_name=jgi_thaps3 chr5 ensembl transcript 1959534 1959896 . - . ID=Thaps34210;Parent=Thaps34210;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1959534 1959896 . - 0 ID=Thaps34210;Parent=Thaps34210;rank=1 chr5 . exon 1959534 1959896 . - . ID=Thaps34210.1;Parent=Thaps34210;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1966400 1967839 . - . ID=Thaps34333;biotype=protein_coding;description=Amino acid permease [Source:UniProtKB/TrEMBL%3BAcc:B8C3S3];external_name=Thaps34333;logic_name=jgi_thaps3 chr5 ensembl transcript 1966400 1967839 . - . ID=Thaps34333;Parent=Thaps34333;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1966400 1966593 . - 0 ID=Thaps34333;Parent=Thaps34333;rank=2 chr5 . exon 1966400 1966593 . - . ID=Thaps34333.2;Parent=Thaps34333;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1966672 1967839 . - 0 ID=Thaps34333;Parent=Thaps34333;rank=1 chr5 ensembl protein_coding_gene 1963602 1966272 . + . ID=Thaps5743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3S2];external_name=Thaps5743;logic_name=jgi_thaps3 chr5 ensembl transcript 1963602 1966272 . + . ID=Thaps5743;Parent=Thaps5743;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1963602 1964048 . + 0 ID=Thaps5743;Parent=Thaps5743;rank=1 chr5 . exon 1963602 1964048 . + . ID=Thaps5743.1;Parent=Thaps5743;constitutive=1;rank=1 chr5 . CDS 1964140 1966272 . + 0 ID=Thaps5743;Parent=Thaps5743;rank=2 chr5 . exon 1964140 1966272 . + . ID=Thaps5743.2;Parent=Thaps5743;constitutive=1;rank=2 chr5 . repeat_region 1968471 1968506 . ? . description=trf chr5 . repeat_region 1970355 1970382 . ? . description=trf chr5 . repeat_region 1975145 1975152 . ? . description=dust chr5 ensembl protein_coding_gene 1970774 1974357 . - . ID=Thaps22897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3S5];external_name=Thaps22897;logic_name=jgi_thaps3 chr5 ensembl transcript 1970774 1974357 . - . ID=Thaps22897;Parent=Thaps22897;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1970774 1970810 . - 0 ID=Thaps22897;Parent=Thaps22897;rank=6 chr5 . exon 1970774 1970810 . - . ID=Thaps22897.6;Parent=Thaps22897;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 1970854 1971733 . - 0 ID=Thaps22897;Parent=Thaps22897;rank=5 chr5 . exon 1970854 1971733 . - . ID=Thaps22897.5;Parent=Thaps22897;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 1971803 1971914 . - 0 ID=Thaps22897;Parent=Thaps22897;rank=4 chr5 . exon 1971803 1971914 . - . ID=Thaps22897.4;Parent=Thaps22897;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 1971989 1972249 . - 0 ID=Thaps22897;Parent=Thaps22897;rank=3 chr5 . exon 1971989 1972249 . - . ID=Thaps22897.3;Parent=Thaps22897;constitutive=1;rank=3 chr5 . CDS 1972329 1972424 . - 0 ID=Thaps22897;Parent=Thaps22897;rank=2 chr5 . exon 1972329 1972424 . - . ID=Thaps22897.2;Parent=Thaps22897;constitutive=1;rank=2 chr5 . CDS 1972507 1974357 . - 0 ID=Thaps22897;Parent=Thaps22897;rank=1 chr5 . exon 1972507 1974357 . - . ID=Thaps22897.1;Parent=Thaps22897;constitutive=1;rank=1 chr5 . exon 1966672 1967839 . - . ID=Thaps34333.1;Parent=Thaps34333;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1968876 1970178 . + . ID=Thaps34507;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3S4];external_name=Thaps34507;logic_name=jgi_thaps3 chr5 ensembl transcript 1968876 1970178 . + . ID=Thaps34507;Parent=Thaps34507;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1968876 1968912 . + 0 ID=Thaps34507;Parent=Thaps34507;rank=1 chr5 . exon 1968876 1968912 . + . ID=Thaps34507.1;Parent=Thaps34507;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1969058 1969329 . + 0 ID=Thaps34507;Parent=Thaps34507;rank=2 chr5 . exon 1969058 1969329 . + . ID=Thaps34507.2;Parent=Thaps34507;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1969471 1969575 . + 0 ID=Thaps34507;Parent=Thaps34507;rank=3 chr5 . exon 1969471 1969575 . + . ID=Thaps34507.3;Parent=Thaps34507;constitutive=1;rank=3 chr5 . CDS 1969666 1970178 . + 0 ID=Thaps34507;Parent=Thaps34507;rank=4 chr5 . exon 1969666 1970178 . + . ID=Thaps34507.4;Parent=Thaps34507;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 1974625 1975059 . + . ID=Thaps5747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3S6];external_name=Thaps5747;logic_name=jgi_thaps3 chr5 ensembl transcript 1974625 1975059 . + . ID=Thaps5747;Parent=Thaps5747;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1974625 1975059 . + 0 ID=Thaps5747;Parent=Thaps5747;rank=1 chr5 . exon 1974625 1975059 . + . ID=Thaps5747.1;Parent=Thaps5747;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1980321 1984685 . - . ID=Thaps22898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3S9];external_name=Thaps22898;logic_name=jgi_thaps3 chr5 ensembl transcript 1980321 1984685 . - . ID=Thaps22898;Parent=Thaps22898;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1980321 1983793 . - 0 ID=Thaps22898;Parent=Thaps22898;rank=2 chr5 . exon 1980321 1983793 . - . ID=Thaps22898.2;Parent=Thaps22898;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 1983890 1984685 . - 0 ID=Thaps22898;Parent=Thaps22898;rank=1 chr5 . exon 1983890 1984685 . - . ID=Thaps22898.1;Parent=Thaps22898;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 1979337 1979860 . + . ID=Thaps262635;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3S8];external_name=MYB20;logic_name=jgi_thaps3 chr5 ensembl transcript 1979337 1979860 . + . ID=Thaps262635;Parent=Thaps262635;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1979337 1979471 . + 0 ID=Thaps262635;Parent=Thaps262635;rank=1 chr5 . exon 1979337 1979471 . + . ID=Thaps262635.1;Parent=Thaps262635;constitutive=1;rank=1 chr5 . CDS 1979561 1979860 . + 0 ID=Thaps262635;Parent=Thaps262635;rank=2 chr5 . exon 1979561 1979860 . + . ID=Thaps262635.2;Parent=Thaps262635;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1985073 1985441 . + . ID=Thaps262636;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3T0];external_name=Thaps262636;logic_name=jgi_thaps3 chr5 ensembl transcript 1985073 1985441 . + . ID=Thaps262636;Parent=Thaps262636;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1985073 1985203 . + 0 ID=Thaps262636;Parent=Thaps262636;rank=1 chr5 . exon 1985073 1985203 . + . ID=Thaps262636.1;Parent=Thaps262636;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 1985336 1985441 . + 0 ID=Thaps262636;Parent=Thaps262636;rank=2 chr5 . exon 1985336 1985441 . + . ID=Thaps262636.2;Parent=Thaps262636;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 1985642 1986256 . + . ID=Thaps262637;biotype=protein_coding;description=Prolyl 4-hydroxylase alpha subunit-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3T1];external_name=Thaps262637;logic_name=jgi_thaps3 chr5 ensembl transcript 1985642 1986256 . + . ID=Thaps262637;Parent=Thaps262637;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1985642 1985969 . + 0 ID=Thaps262637;Parent=Thaps262637;rank=1 chr5 . exon 1985642 1985969 . + . ID=Thaps262637.1;Parent=Thaps262637;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1986044 1986256 . + 0 ID=Thaps262637;Parent=Thaps262637;rank=2 chr5 . exon 1986044 1986256 . + . ID=Thaps262637.2;Parent=Thaps262637;constitutive=1;rank=2 chr5 ensembl protein_coding_gene 1977316 1977805 . + . ID=Thaps5748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3S7];external_name=Thaps5748;logic_name=jgi_thaps3 chr5 ensembl transcript 1977316 1977805 . + . ID=Thaps5748;Parent=Thaps5748;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1977316 1977433 . + 0 ID=Thaps5748;Parent=Thaps5748;rank=1 chr5 . exon 1977316 1977433 . + . ID=Thaps5748.1;Parent=Thaps5748;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 1977546 1977805 . + 0 ID=Thaps5748;Parent=Thaps5748;rank=2 chr5 . exon 1977546 1977805 . + . ID=Thaps5748.2;Parent=Thaps5748;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . repeat_region 1989455 1989467 . ? . description=dust chr5 . repeat_region 1989473 1989530 . ? . description=trf chr5 . repeat_region 1995455 1995516 . ? . description=dust chr5 ensembl protein_coding_gene 1986827 1987869 . + . ID=Thaps22899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3T2];external_name=Thaps22899;logic_name=jgi_thaps3 chr5 ensembl transcript 1986827 1987869 . + . ID=Thaps22899;Parent=Thaps22899;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1986827 1986877 . + 0 ID=Thaps22899;Parent=Thaps22899;rank=1 chr5 . exon 1986827 1986877 . + . ID=Thaps22899.1;Parent=Thaps22899;constitutive=1;rank=1 chr5 . CDS 1986991 1987101 . + 0 ID=Thaps22899;Parent=Thaps22899;rank=2 chr5 . exon 1986991 1987101 . + . ID=Thaps22899.2;Parent=Thaps22899;constitutive=1;rank=2 chr5 . CDS 1987239 1987575 . + 0 ID=Thaps22899;Parent=Thaps22899;rank=3 chr5 . exon 1987239 1987575 . + . ID=Thaps22899.3;Parent=Thaps22899;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 1987697 1987869 . + 0 ID=Thaps22899;Parent=Thaps22899;rank=4 chr5 . exon 1987697 1987869 . + . ID=Thaps22899.4;Parent=Thaps22899;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 1989522 1990697 . - . ID=Thaps22900;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3T3];external_name=Thaps22900;logic_name=jgi_thaps3 chr5 ensembl transcript 1989522 1990697 . - . ID=Thaps22900;Parent=Thaps22900;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1989522 1990697 . - 0 ID=Thaps22900;Parent=Thaps22900;rank=1 chr5 . exon 1989522 1990697 . - . ID=Thaps22900.1;Parent=Thaps22900;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1991695 1993287 . + . ID=Thaps22901;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3T4];external_name=Thaps22901;logic_name=jgi_thaps3 chr5 ensembl transcript 1991695 1993287 . + . ID=Thaps22901;Parent=Thaps22901;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1991695 1993287 . + 0 ID=Thaps22901;Parent=Thaps22901;rank=1 chr5 . exon 1991695 1993287 . + . ID=Thaps22901.1;Parent=Thaps22901;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 1993401 1995491 . - . ID=Thaps22902;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3T5];external_name=Thaps22902;logic_name=jgi_thaps3 chr5 ensembl transcript 1993401 1995491 . - . ID=Thaps22902;Parent=Thaps22902;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 1993401 1995491 . - 0 ID=Thaps22902;Parent=Thaps22902;rank=1 chr5 . exon 1993401 1995491 . - . ID=Thaps22902.1;Parent=Thaps22902;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2002056 2003327 . - . ID=Thaps268958;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3T7];external_name=Thaps268958;logic_name=jgi_thaps3 chr5 ensembl transcript 2002056 2003327 . - . ID=Thaps268958;Parent=Thaps268958;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2002056 2003327 . - 0 ID=Thaps268958;Parent=Thaps268958;rank=1 chr5 . exon 2002056 2003327 . - . ID=Thaps268958.1;Parent=Thaps268958;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2003787 2004233 . + . ID=Thaps28425;biotype=protein_coding;description=RS19%2C ribosomal protein 19 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C3T8];external_name=RS19;logic_name=jgi_thaps3 chr5 ensembl transcript 2003787 2004233 . + . ID=Thaps28425;Parent=Thaps28425;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2003787 2004233 . + 0 ID=Thaps28425;Parent=Thaps28425;rank=1 chr5 . exon 2003787 2004233 . + . ID=Thaps28425.1;Parent=Thaps28425;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2000195 2001223 . - . ID=Thaps5757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3T6];external_name=Thaps5757;logic_name=jgi_thaps3 chr5 ensembl transcript 2000195 2001223 . - . ID=Thaps5757;Parent=Thaps5757;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2000195 2001223 . - 0 ID=Thaps5757;Parent=Thaps5757;rank=1 chr5 . exon 2000195 2001223 . - . ID=Thaps5757.1;Parent=Thaps5757;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2005068 2007679 . - . ID=Thaps5760;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3T9];external_name=Thaps5760;logic_name=jgi_thaps3 chr5 ensembl transcript 2005068 2007679 . - . ID=Thaps5760;Parent=Thaps5760;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2005068 2007499 . - 0 ID=Thaps5760;Parent=Thaps5760;rank=2 chr5 . exon 2005068 2007499 . - . ID=Thaps5760.2;Parent=Thaps5760;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2007598 2007679 . - 0 ID=Thaps5760;Parent=Thaps5760;rank=1 chr5 . repeat_region 2006706 2006769 . ? . description=dust chr5 . repeat_region 2007294 2007327 . ? . description=trf chr5 . repeat_region 2009061 2009204 . ? . description=trf chr5 . repeat_region 2013573 2013640 . ? . description=trf chr5 . repeat_region 2013666 2013687 . ? . description=trf chr5 . repeat_region 2015233 2015242 . ? . description=dust chr5 ensembl protein_coding_gene 2008022 2010609 . + . ID=Thaps22907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U0];external_name=Thaps22907;logic_name=jgi_thaps3 chr5 ensembl transcript 2008022 2010609 . + . ID=Thaps22907;Parent=Thaps22907;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2008022 2008047 . + 0 ID=Thaps22907;Parent=Thaps22907;rank=1 chr5 . exon 2008022 2008047 . + . ID=Thaps22907.1;Parent=Thaps22907;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 2008263 2010609 . + 0 ID=Thaps22907;Parent=Thaps22907;rank=2 chr5 . exon 2008263 2010609 . + . ID=Thaps22907.2;Parent=Thaps22907;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 2011999 2013223 . - . ID=Thaps34237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U1];external_name=Thaps34237;logic_name=jgi_thaps3 chr5 ensembl transcript 2011999 2013223 . - . ID=Thaps34237;Parent=Thaps34237;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2011999 2012084 . - 0 ID=Thaps34237;Parent=Thaps34237;rank=3 chr5 . exon 2011999 2012084 . - . ID=Thaps34237.3;Parent=Thaps34237;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2012170 2012372 . - 0 ID=Thaps34237;Parent=Thaps34237;rank=2 chr5 . exon 2012170 2012372 . - . ID=Thaps34237.2;Parent=Thaps34237;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2012466 2013223 . - 0 ID=Thaps34237;Parent=Thaps34237;rank=1 chr5 . exon 2012466 2013223 . - . ID=Thaps34237.1;Parent=Thaps34237;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 2007598 2007679 . - . ID=Thaps5760.1;Parent=Thaps5760;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2014903 2019259 . + . ID=Thaps5763;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U2];external_name=Thaps5763;logic_name=jgi_thaps3 chr5 ensembl transcript 2014903 2019259 . + . ID=Thaps5763;Parent=Thaps5763;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2014903 2014956 . + 0 ID=Thaps5763;Parent=Thaps5763;rank=1 chr5 . exon 2014903 2014956 . + . ID=Thaps5763.1;Parent=Thaps5763;constitutive=1;rank=1 chr5 . CDS 2015347 2018392 . + 0 ID=Thaps5763;Parent=Thaps5763;rank=2 chr5 . exon 2015347 2018392 . + . ID=Thaps5763.2;Parent=Thaps5763;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2018481 2019259 . + 0 ID=Thaps5763;Parent=Thaps5763;rank=3 chr5 ensembl protein_coding_gene 2022233 2026043 . - . ID=Thaps22908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U4];external_name=Thaps22908;logic_name=jgi_thaps3 chr5 ensembl transcript 2022233 2026043 . - . ID=Thaps22908;Parent=Thaps22908;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2022233 2023383 . - 0 ID=Thaps22908;Parent=Thaps22908;rank=9 chr5 . exon 2022233 2023383 . - . ID=Thaps22908.9;Parent=Thaps22908;constitutive=1;ensembl_end_phase=2;rank=9 chr5 . CDS 2023457 2024170 . - 0 ID=Thaps22908;Parent=Thaps22908;rank=8 chr5 . exon 2023457 2024170 . - . ID=Thaps22908.8;Parent=Thaps22908;constitutive=1;rank=8 chr5 . CDS 2024204 2024255 . - 0 ID=Thaps22908;Parent=Thaps22908;rank=7 chr5 . exon 2024204 2024255 . - . ID=Thaps22908.7;Parent=Thaps22908;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 2024407 2024475 . - 0 ID=Thaps22908;Parent=Thaps22908;rank=6 chr5 . exon 2024407 2024475 . - . ID=Thaps22908.6;Parent=Thaps22908;constitutive=1;rank=6 chr5 . CDS 2024552 2024641 . - 0 ID=Thaps22908;Parent=Thaps22908;rank=5 chr5 . exon 2024552 2024641 . - . ID=Thaps22908.5;Parent=Thaps22908;constitutive=1;rank=5 chr5 . CDS 2024722 2024779 . - 0 ID=Thaps22908;Parent=Thaps22908;rank=4 chr5 . exon 2024722 2024779 . - . ID=Thaps22908.4;Parent=Thaps22908;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 2024819 2025111 . - 0 ID=Thaps22908;Parent=Thaps22908;rank=3 chr5 . exon 2024819 2025111 . - . ID=Thaps22908.3;Parent=Thaps22908;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2025295 2025600 . - 0 ID=Thaps22908;Parent=Thaps22908;rank=2 chr5 . exon 2025295 2025600 . - . ID=Thaps22908.2;Parent=Thaps22908;constitutive=1;rank=2 chr5 . CDS 2025705 2026043 . - 0 ID=Thaps22908;Parent=Thaps22908;rank=1 chr5 . exon 2025705 2026043 . - . ID=Thaps22908.1;Parent=Thaps22908;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2021504 2022028 . + . ID=Thaps262644;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U3];external_name=Thaps262644;logic_name=jgi_thaps3 chr5 ensembl transcript 2021504 2022028 . + . ID=Thaps262644;Parent=Thaps262644;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2021504 2022028 . + 0 ID=Thaps262644;Parent=Thaps262644;rank=1 chr5 . exon 2021504 2022028 . + . ID=Thaps262644.1;Parent=Thaps262644;constitutive=1;rank=1 chr5 . exon 2018481 2019259 . + . ID=Thaps5763.3;Parent=Thaps5763;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 2026562 2039651 . - . ID=Thaps5766;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U5];external_name=Thaps5766;logic_name=jgi_thaps3 chr5 ensembl transcript 2026562 2039651 . - . ID=Thaps5766;Parent=Thaps5766;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2026562 2027401 . - 0 ID=Thaps5766;Parent=Thaps5766;rank=8 chr5 . exon 2026562 2027401 . - . ID=Thaps5766.8;Parent=Thaps5766;constitutive=1;rank=8 chr5 . CDS 2027520 2027647 . - 0 ID=Thaps5766;Parent=Thaps5766;rank=7 chr5 . exon 2027520 2027647 . - . ID=Thaps5766.7;Parent=Thaps5766;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 2028069 2035520 . - 0 ID=Thaps5766;Parent=Thaps5766;rank=6 chr5 . exon 2028069 2035520 . - . ID=Thaps5766.6;Parent=Thaps5766;constitutive=1;rank=6 chr5 . CDS 2035600 2036220 . - 0 ID=Thaps5766;Parent=Thaps5766;rank=5 chr5 . exon 2035600 2036220 . - . ID=Thaps5766.5;Parent=Thaps5766;constitutive=1;rank=5 chr5 . CDS 2036313 2037041 . - 0 ID=Thaps5766;Parent=Thaps5766;rank=4 chr5 . exon 2036313 2037041 . - . ID=Thaps5766.4;Parent=Thaps5766;constitutive=1;rank=4 chr5 . CDS 2037123 2037548 . - 0 ID=Thaps5766;Parent=Thaps5766;rank=3 chr5 . CDS 2037632 2038167 . - 0 ID=Thaps5766;Parent=Thaps5766;rank=2 chr5 . CDS 2038483 2039651 . - 0 ID=Thaps5766;Parent=Thaps5766;rank=1 chr5 . repeat_region 2040174 2040189 . ? . description=dust chr5 . repeat_region 2041840 2041870 . ? . description=trf chr5 ensembl protein_coding_gene 2042321 2043900 . + . ID=Thaps262645;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U6];external_name=Thaps262645;logic_name=jgi_thaps3 chr5 ensembl transcript 2042321 2043900 . + . ID=Thaps262645;Parent=Thaps262645;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2042321 2042467 . + 0 ID=Thaps262645;Parent=Thaps262645;rank=1 chr5 . exon 2042321 2042467 . + . ID=Thaps262645.1;Parent=Thaps262645;constitutive=1;rank=1 chr5 . CDS 2042702 2042938 . + 0 ID=Thaps262645;Parent=Thaps262645;rank=2 chr5 . exon 2042702 2042938 . + . ID=Thaps262645.2;Parent=Thaps262645;constitutive=1;rank=2 chr5 . CDS 2043037 2043043 . + 0 ID=Thaps262645;Parent=Thaps262645;rank=3 chr5 . exon 2043037 2043043 . + . ID=Thaps262645.3;Parent=Thaps262645;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 2043062 2043208 . + 0 ID=Thaps262645;Parent=Thaps262645;rank=4 chr5 . exon 2043062 2043208 . + . ID=Thaps262645.4;Parent=Thaps262645;constitutive=1;rank=4 chr5 . CDS 2043283 2043499 . + 0 ID=Thaps262645;Parent=Thaps262645;rank=5 chr5 . exon 2043283 2043499 . + . ID=Thaps262645.5;Parent=Thaps262645;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 2043583 2043900 . + 0 ID=Thaps262645;Parent=Thaps262645;rank=6 chr5 . exon 2043583 2043900 . + . ID=Thaps262645.6;Parent=Thaps262645;constitutive=1;rank=6 chr5 ensembl protein_coding_gene 2044238 2049147 . + . ID=Thaps262646;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U7];external_name=Thaps262646;logic_name=jgi_thaps3 chr5 ensembl transcript 2044238 2049147 . + . ID=Thaps262646;Parent=Thaps262646;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2044238 2044766 . + 0 ID=Thaps262646;Parent=Thaps262646;rank=1 chr5 . exon 2044238 2044766 . + . ID=Thaps262646.1;Parent=Thaps262646;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2044945 2045124 . + 0 ID=Thaps262646;Parent=Thaps262646;rank=2 chr5 . exon 2044945 2045124 . + . ID=Thaps262646.2;Parent=Thaps262646;constitutive=1;rank=2 chr5 . CDS 2045639 2046543 . + 0 ID=Thaps262646;Parent=Thaps262646;rank=3 chr5 . exon 2045639 2046543 . + . ID=Thaps262646.3;Parent=Thaps262646;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2046832 2047032 . + 0 ID=Thaps262646;Parent=Thaps262646;rank=4 chr5 . CDS 2047291 2047396 . + 0 ID=Thaps262646;Parent=Thaps262646;rank=5 chr5 . CDS 2047637 2047956 . + 0 ID=Thaps262646;Parent=Thaps262646;rank=6 chr5 . CDS 2048113 2048343 . + 0 ID=Thaps262646;Parent=Thaps262646;rank=7 chr5 . CDS 2048710 2049147 . + 0 ID=Thaps262646;Parent=Thaps262646;rank=8 chr5 . exon 2037123 2037548 . - . ID=Thaps5766.3;Parent=Thaps5766;constitutive=1;rank=3 chr5 . exon 2037632 2038167 . - . ID=Thaps5766.2;Parent=Thaps5766;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 2038483 2039651 . - . ID=Thaps5766.1;Parent=Thaps5766;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 2046832 2047032 . + . ID=Thaps262646.4;Parent=Thaps262646;constitutive=1;rank=4 chr5 . exon 2047291 2047396 . + . ID=Thaps262646.5;Parent=Thaps262646;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . exon 2047637 2047956 . + . ID=Thaps262646.6;Parent=Thaps262646;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . exon 2048113 2048343 . + . ID=Thaps262646.7;Parent=Thaps262646;constitutive=1;rank=7 chr5 . exon 2048710 2049147 . + . ID=Thaps262646.8;Parent=Thaps262646;constitutive=1;rank=8 chr5 ensembl protein_coding_gene 2050741 2053501 . + . ID=Thaps5768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U8];external_name=Thaps5768;logic_name=jgi_thaps3 chr5 ensembl transcript 2050741 2053501 . + . ID=Thaps5768;Parent=Thaps5768;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2050741 2051151 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=1 chr5 . exon 2050741 2051151 . + . ID=Thaps5768.1;Parent=Thaps5768;constitutive=1;rank=1 chr5 . CDS 2051280 2051665 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=2 chr5 . exon 2051280 2051665 . + . ID=Thaps5768.2;Parent=Thaps5768;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2051759 2051918 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=3 chr5 . exon 2051759 2051918 . + . ID=Thaps5768.3;Parent=Thaps5768;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 2052243 2052448 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=4 chr5 . exon 2052243 2052448 . + . ID=Thaps5768.4;Parent=Thaps5768;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 2052496 2052548 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=5 chr5 . exon 2052496 2052548 . + . ID=Thaps5768.5;Parent=Thaps5768;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 2052641 2052725 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=6 chr5 . exon 2052641 2052725 . + . ID=Thaps5768.6;Parent=Thaps5768;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 2052830 2052842 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=7 chr5 . exon 2052830 2052842 . + . ID=Thaps5768.7;Parent=Thaps5768;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 2052941 2052959 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=8 chr5 . exon 2052941 2052959 . + . ID=Thaps5768.8;Parent=Thaps5768;constitutive=1;ensembl_end_phase=1;rank=8 chr5 . CDS 2053057 2053346 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=9 chr5 . exon 2053057 2053346 . + . ID=Thaps5768.9;Parent=Thaps5768;constitutive=1;ensembl_end_phase=2;rank=9 chr5 . CDS 2053454 2053501 . + 0 ID=Thaps5768;Parent=Thaps5768;rank=10 chr5 . exon 2053454 2053501 . + . ID=Thaps5768.10;Parent=Thaps5768;constitutive=1;rank=10 chr5 ensembl protein_coding_gene 2054188 2056458 . + . ID=Thaps5769;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3U9];external_name=Thaps5769;logic_name=jgi_thaps3 chr5 ensembl transcript 2054188 2056458 . + . ID=Thaps5769;Parent=Thaps5769;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2054188 2054893 . + 0 ID=Thaps5769;Parent=Thaps5769;rank=1 chr5 . exon 2054188 2054893 . + . ID=Thaps5769.1;Parent=Thaps5769;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2055005 2056458 . + 0 ID=Thaps5769;Parent=Thaps5769;rank=2 chr5 . exon 2055005 2056458 . + . ID=Thaps5769.2;Parent=Thaps5769;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . repeat_region 2065597 2065616 . ? . description=trf chr5 ensembl protein_coding_gene 2058932 2065077 . - . ID=Thaps268963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3V1];external_name=Thaps268963;logic_name=jgi_thaps3 chr5 ensembl transcript 2058932 2065077 . - . ID=Thaps268963;Parent=Thaps268963;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2058932 2059056 . - 0 ID=Thaps268963;Parent=Thaps268963;rank=7 chr5 . exon 2058932 2059056 . - . ID=Thaps268963.7;Parent=Thaps268963;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 2059609 2060086 . - 0 ID=Thaps268963;Parent=Thaps268963;rank=6 chr5 . exon 2059609 2060086 . - . ID=Thaps268963.6;Parent=Thaps268963;constitutive=1;ensembl_end_phase=1;rank=6 chr5 . CDS 2063823 2063897 . - 0 ID=Thaps268963;Parent=Thaps268963;rank=5 chr5 . exon 2063823 2063897 . - . ID=Thaps268963.5;Parent=Thaps268963;constitutive=1;rank=5 chr5 . CDS 2063997 2064357 . - 0 ID=Thaps268963;Parent=Thaps268963;rank=4 chr5 . exon 2063997 2064357 . - . ID=Thaps268963.4;Parent=Thaps268963;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 2064415 2064561 . - 0 ID=Thaps268963;Parent=Thaps268963;rank=3 chr5 . exon 2064415 2064561 . - . ID=Thaps268963.3;Parent=Thaps268963;constitutive=1;rank=3 chr5 . CDS 2064676 2064928 . - 0 ID=Thaps268963;Parent=Thaps268963;rank=2 chr5 . exon 2064676 2064928 . - . ID=Thaps268963.2;Parent=Thaps268963;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2065023 2065077 . - 0 ID=Thaps268963;Parent=Thaps268963;rank=1 chr5 . exon 2065023 2065077 . - . ID=Thaps268963.1;Parent=Thaps268963;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2056953 2057971 . + . ID=Thaps5770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3V0];external_name=Thaps5770;logic_name=jgi_thaps3 chr5 ensembl transcript 2056953 2057971 . + . ID=Thaps5770;Parent=Thaps5770;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2056953 2057161 . + 0 ID=Thaps5770;Parent=Thaps5770;rank=1 chr5 . exon 2056953 2057161 . + . ID=Thaps5770.1;Parent=Thaps5770;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 2057256 2057268 . + 0 ID=Thaps5770;Parent=Thaps5770;rank=2 chr5 . exon 2057256 2057268 . + . ID=Thaps5770.2;Parent=Thaps5770;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2057441 2057971 . + 0 ID=Thaps5770;Parent=Thaps5770;rank=3 chr5 . exon 2057441 2057971 . + . ID=Thaps5770.3;Parent=Thaps5770;constitutive=1;rank=3 chr5 . repeat_region 2066840 2066928 . + . description=Gypsy1ALTR_TP chr5 . repeat_region 2066931 2066962 . + . description=Gypsy1ALTR_TP chr5 . repeat_region 2072205 2072250 . ? . description=dust chr5 . repeat_region 2072799 2072843 . ? . description=dust chr5 . repeat_region 2073277 2073329 . ? . description=dust chr5 . repeat_region 2073885 2073931 . ? . description=dust chr5 . repeat_region 2074359 2074392 . ? . description=dust chr5 . repeat_region 2074659 2074676 . ? . description=dust chr5 . repeat_region 2075489 2075498 . ? . description=dust chr5 . repeat_region 2076042 2076055 . ? . description=dust chr5 ensembl protein_coding_gene 2067026 2068573 . + . ID=Thaps5774;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3V2];external_name=Thaps5774;logic_name=jgi_thaps3 chr5 ensembl transcript 2067026 2068573 . + . ID=Thaps5774;Parent=Thaps5774;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2067026 2067396 . + 0 ID=Thaps5774;Parent=Thaps5774;rank=1 chr5 . exon 2067026 2067396 . + . ID=Thaps5774.1;Parent=Thaps5774;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 2067570 2067589 . + 0 ID=Thaps5774;Parent=Thaps5774;rank=2 chr5 . exon 2067570 2067589 . + . ID=Thaps5774.2;Parent=Thaps5774;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2067915 2068573 . + 0 ID=Thaps5774;Parent=Thaps5774;rank=3 chr5 . exon 2067915 2068573 . + . ID=Thaps5774.3;Parent=Thaps5774;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 2068761 2069927 . - . ID=Thaps5775;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3V3];external_name=Thaps5775;logic_name=jgi_thaps3 chr5 ensembl transcript 2068761 2069927 . - . ID=Thaps5775;Parent=Thaps5775;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2068761 2069673 . - 0 ID=Thaps5775;Parent=Thaps5775;rank=2 chr5 . exon 2068761 2069673 . - . ID=Thaps5775.2;Parent=Thaps5775;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2069788 2069927 . - 0 ID=Thaps5775;Parent=Thaps5775;rank=1 chr5 . exon 2069788 2069927 . - . ID=Thaps5775.1;Parent=Thaps5775;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 2076057 2080925 . - . ID=Thaps5776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3V4];external_name=Thaps5776;logic_name=jgi_thaps3 chr5 ensembl transcript 2076057 2080925 . - . ID=Thaps5776;Parent=Thaps5776;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2076057 2077252 . - 0 ID=Thaps5776;Parent=Thaps5776;rank=7 chr5 . exon 2076057 2077252 . - . ID=Thaps5776.7;Parent=Thaps5776;constitutive=1;ensembl_end_phase=2;rank=7 chr5 . CDS 2077344 2077630 . - 0 ID=Thaps5776;Parent=Thaps5776;rank=6 chr5 . CDS 2077924 2078315 . - 0 ID=Thaps5776;Parent=Thaps5776;rank=5 chr5 . CDS 2078336 2078786 . - 0 ID=Thaps5776;Parent=Thaps5776;rank=4 chr5 . CDS 2078822 2079546 . - 0 ID=Thaps5776;Parent=Thaps5776;rank=3 chr5 . CDS 2079575 2080569 . - 0 ID=Thaps5776;Parent=Thaps5776;rank=2 chr5 . CDS 2080763 2080925 . - 0 ID=Thaps5776;Parent=Thaps5776;rank=1 chr5 . repeat_region 2076276 2076557 . ? . description=trf chr5 . repeat_region 2076388 2076474 . ? . description=trf chr5 . repeat_region 2076531 2077047 . ? . description=trf chr5 . repeat_region 2076783 2076836 . ? . description=trf chr5 . repeat_region 2077698 2077888 . + . description=TE2c_TP chr5 . repeat_region 2085172 2085199 . ? . description=trf chr5 . repeat_region 2085776 2085805 . ? . description=trf chr5 . exon 2077344 2077630 . - . ID=Thaps5776.6;Parent=Thaps5776;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . exon 2077924 2078315 . - . ID=Thaps5776.5;Parent=Thaps5776;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . exon 2078336 2078786 . - . ID=Thaps5776.4;Parent=Thaps5776;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . exon 2078822 2079546 . - . ID=Thaps5776.3;Parent=Thaps5776;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . exon 2079575 2080569 . - . ID=Thaps5776.2;Parent=Thaps5776;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 2080763 2080925 . - . ID=Thaps5776.1;Parent=Thaps5776;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2081194 2084514 . - . ID=Thaps5777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3V5];external_name=Thaps5777;logic_name=jgi_thaps3 chr5 ensembl transcript 2081194 2084514 . - . ID=Thaps5777;Parent=Thaps5777;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2081194 2081468 . - 0 ID=Thaps5777;Parent=Thaps5777;rank=5 chr5 . exon 2081194 2081468 . - . ID=Thaps5777.5;Parent=Thaps5777;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 2081573 2082886 . - 0 ID=Thaps5777;Parent=Thaps5777;rank=4 chr5 . exon 2081573 2082886 . - . ID=Thaps5777.4;Parent=Thaps5777;constitutive=1;rank=4 chr5 . CDS 2082923 2083738 . - 0 ID=Thaps5777;Parent=Thaps5777;rank=3 chr5 . exon 2082923 2083738 . - . ID=Thaps5777.3;Parent=Thaps5777;constitutive=1;rank=3 chr5 . CDS 2083860 2084238 . - 0 ID=Thaps5777;Parent=Thaps5777;rank=2 chr5 . exon 2083860 2084238 . - . ID=Thaps5777.2;Parent=Thaps5777;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2084377 2084514 . - 0 ID=Thaps5777;Parent=Thaps5777;rank=1 chr5 . exon 2084377 2084514 . - . ID=Thaps5777.1;Parent=Thaps5777;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2084690 2085001 . + . ID=Thaps5778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3V6];external_name=Thaps5778;logic_name=jgi_thaps3 chr5 ensembl transcript 2084690 2085001 . + . ID=Thaps5778;Parent=Thaps5778;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2084690 2085001 . + 0 ID=Thaps5778;Parent=Thaps5778;rank=1 chr5 . exon 2084690 2085001 . + . ID=Thaps5778.1;Parent=Thaps5778;constitutive=1;rank=1 chr5 . repeat_region 2086947 2086996 . ? . description=dust chr5 . repeat_region 2087368 2087395 . ? . description=dust chr5 . repeat_region 2088208 2088215 . ? . description=dust chr5 . repeat_region 2093645 2093701 . ? . description=dust chr5 ensembl protein_coding_gene 2095181 2097820 . - . ID=Thaps268965;biotype=protein_coding;description=Aconitase hydratase 2 [Source:UniProtKB/TrEMBL%3BAcc:B8C3V9];external_name=ACNB;logic_name=jgi_thaps3 chr5 ensembl transcript 2095181 2097820 . - . ID=Thaps268965;Parent=Thaps268965;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2095181 2097393 . - 0 ID=Thaps268965;Parent=Thaps268965;rank=2 chr5 . exon 2095181 2097393 . - . ID=Thaps268965.2;Parent=Thaps268965;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2097409 2097820 . - 0 ID=Thaps268965;Parent=Thaps268965;rank=1 chr5 ensembl protein_coding_gene 2088773 2090048 . - . ID=Thaps5779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3V7];external_name=Thaps5779;logic_name=jgi_thaps3 chr5 ensembl transcript 2088773 2090048 . - . ID=Thaps5779;Parent=Thaps5779;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2088773 2089575 . - 0 ID=Thaps5779;Parent=Thaps5779;rank=3 chr5 . exon 2088773 2089575 . - . ID=Thaps5779.3;Parent=Thaps5779;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2089667 2089788 . - 0 ID=Thaps5779;Parent=Thaps5779;rank=2 chr5 . exon 2089667 2089788 . - . ID=Thaps5779.2;Parent=Thaps5779;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2089921 2090048 . - 0 ID=Thaps5779;Parent=Thaps5779;rank=1 chr5 . exon 2089921 2090048 . - . ID=Thaps5779.1;Parent=Thaps5779;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 2090764 2094179 . - . ID=Thaps5780;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3V8];external_name=Thaps5780;logic_name=jgi_thaps3 chr5 ensembl transcript 2090764 2094179 . - . ID=Thaps5780;Parent=Thaps5780;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2090764 2092853 . - 0 ID=Thaps5780;Parent=Thaps5780;rank=3 chr5 . exon 2090764 2092853 . - . ID=Thaps5780.3;Parent=Thaps5780;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2092884 2093763 . - 0 ID=Thaps5780;Parent=Thaps5780;rank=2 chr5 . exon 2092884 2093763 . - . ID=Thaps5780.2;Parent=Thaps5780;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2093910 2094179 . - 0 ID=Thaps5780;Parent=Thaps5780;rank=1 chr5 . exon 2093910 2094179 . - . ID=Thaps5780.1;Parent=Thaps5780;constitutive=1;rank=1 chr5 . repeat_region 2099025 2099049 . ? . description=trf chr5 . exon 2097409 2097820 . - . ID=Thaps268965.1;Parent=Thaps268965;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2101734 2103465 . - . ID=Thaps268966;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W0];external_name=Thaps268966;logic_name=jgi_thaps3 chr5 ensembl transcript 2101734 2103465 . - . ID=Thaps268966;Parent=Thaps268966;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2101734 2102094 . - 0 ID=Thaps268966;Parent=Thaps268966;rank=7 chr5 . exon 2101734 2102094 . - . ID=Thaps268966.7;Parent=Thaps268966;constitutive=1;ensembl_end_phase=1;rank=7 chr5 . CDS 2102171 2102370 . - 0 ID=Thaps268966;Parent=Thaps268966;rank=6 chr5 . exon 2102171 2102370 . - . ID=Thaps268966.6;Parent=Thaps268966;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . CDS 2102461 2102564 . - 0 ID=Thaps268966;Parent=Thaps268966;rank=5 chr5 . exon 2102461 2102564 . - . ID=Thaps268966.5;Parent=Thaps268966;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 2102633 2102737 . - 0 ID=Thaps268966;Parent=Thaps268966;rank=4 chr5 . exon 2102633 2102737 . - . ID=Thaps268966.4;Parent=Thaps268966;constitutive=1;rank=4 chr5 . CDS 2102814 2102837 . - 0 ID=Thaps268966;Parent=Thaps268966;rank=3 chr5 . exon 2102814 2102837 . - . ID=Thaps268966.3;Parent=Thaps268966;constitutive=1;rank=3 chr5 . CDS 2102908 2103117 . - 0 ID=Thaps268966;Parent=Thaps268966;rank=2 chr5 . exon 2102908 2103117 . - . ID=Thaps268966.2;Parent=Thaps268966;constitutive=1;rank=2 chr5 . CDS 2103207 2103465 . - 0 ID=Thaps268966;Parent=Thaps268966;rank=1 chr5 . exon 2103207 2103465 . - . ID=Thaps268966.1;Parent=Thaps268966;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2106650 2114986 . + . ID=Thaps22916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W1];external_name=Thaps22916;logic_name=jgi_thaps3 chr5 ensembl transcript 2106650 2114986 . + . ID=Thaps22916;Parent=Thaps22916;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2106650 2108028 . + 0 ID=Thaps22916;Parent=Thaps22916;rank=1 chr5 . exon 2106650 2108028 . + . ID=Thaps22916.1;Parent=Thaps22916;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 2108236 2108578 . + 0 ID=Thaps22916;Parent=Thaps22916;rank=2 chr5 . exon 2108236 2108578 . + . ID=Thaps22916.2;Parent=Thaps22916;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2108663 2110110 . + 0 ID=Thaps22916;Parent=Thaps22916;rank=3 chr5 . exon 2108663 2110110 . + . ID=Thaps22916.3;Parent=Thaps22916;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2110205 2114381 . + 0 ID=Thaps22916;Parent=Thaps22916;rank=4 chr5 . exon 2110205 2114381 . + . ID=Thaps22916.4;Parent=Thaps22916;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 2114516 2114986 . + 0 ID=Thaps22916;Parent=Thaps22916;rank=5 chr5 . exon 2114516 2114986 . + . ID=Thaps22916.5;Parent=Thaps22916;constitutive=1;rank=5 chr5 . repeat_region 2120374 2120410 . ? . description=trf chr5 . repeat_region 2120376 2120411 . ? . description=trf chr5 . repeat_region 2120634 2120713 . ? . description=trf chr5 ensembl protein_coding_gene 2123782 2124056 . + . ID=Thaps20232;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W5];external_name=Thaps20232;logic_name=jgi_thaps3 chr5 ensembl transcript 2123782 2124056 . + . ID=Thaps20232;Parent=Thaps20232;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2123782 2123891 . + 0 ID=Thaps20232;Parent=Thaps20232;rank=1 chr5 . exon 2123782 2123891 . + . ID=Thaps20232.1;Parent=Thaps20232;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 2123978 2124056 . + 0 ID=Thaps20232;Parent=Thaps20232;rank=2 chr5 . exon 2123978 2124056 . + . ID=Thaps20232.2;Parent=Thaps20232;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 2124716 2126413 . - . ID=Thaps22918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W6];external_name=Thaps22918;logic_name=jgi_thaps3 chr5 ensembl transcript 2124716 2126413 . - . ID=Thaps22918;Parent=Thaps22918;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2124716 2126413 . - 0 ID=Thaps22918;Parent=Thaps22918;rank=1 chr5 . exon 2124716 2126413 . - . ID=Thaps22918.1;Parent=Thaps22918;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2122771 2123022 . + . ID=Thaps34533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W4];external_name=Thaps34533;logic_name=jgi_thaps3 chr5 ensembl transcript 2122771 2123022 . + . ID=Thaps34533;Parent=Thaps34533;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2122771 2123022 . + 0 ID=Thaps34533;Parent=Thaps34533;rank=1 chr5 . exon 2122771 2123022 . + . ID=Thaps34533.1;Parent=Thaps34533;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2117200 2118039 . - . ID=Thaps5784;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W2];external_name=Thaps5784;logic_name=jgi_thaps3 chr5 ensembl transcript 2117200 2118039 . - . ID=Thaps5784;Parent=Thaps5784;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2117200 2118039 . - 0 ID=Thaps5784;Parent=Thaps5784;rank=1 chr5 . exon 2117200 2118039 . - . ID=Thaps5784.1;Parent=Thaps5784;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2118626 2119498 . - . ID=Thaps5785;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W3];external_name=Thaps5785;logic_name=jgi_thaps3 chr5 ensembl transcript 2118626 2119498 . - . ID=Thaps5785;Parent=Thaps5785;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2118626 2119498 . - 0 ID=Thaps5785;Parent=Thaps5785;rank=1 chr5 . exon 2118626 2119498 . - . ID=Thaps5785.1;Parent=Thaps5785;constitutive=1;rank=1 chr5 . repeat_region 2126652 2126721 . - . description=TE2c_TP chr5 ensembl protein_coding_gene 2127137 2134927 . - . ID=Thaps5788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W7];external_name=Thaps5788;logic_name=jgi_thaps3 chr5 ensembl transcript 2127137 2134927 . - . ID=Thaps5788;Parent=Thaps5788;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2127137 2128329 . - 0 ID=Thaps5788;Parent=Thaps5788;rank=5 chr5 . exon 2127137 2128329 . - . ID=Thaps5788.5;Parent=Thaps5788;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 2128410 2129562 . - 0 ID=Thaps5788;Parent=Thaps5788;rank=4 chr5 . exon 2128410 2129562 . - . ID=Thaps5788.4;Parent=Thaps5788;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 2129669 2131601 . - 0 ID=Thaps5788;Parent=Thaps5788;rank=3 chr5 . exon 2129669 2131601 . - . ID=Thaps5788.3;Parent=Thaps5788;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 2131709 2131869 . - 0 ID=Thaps5788;Parent=Thaps5788;rank=2 chr5 . exon 2131709 2131869 . - . ID=Thaps5788.2;Parent=Thaps5788;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2131958 2134927 . - 0 ID=Thaps5788;Parent=Thaps5788;rank=1 chr5 . exon 2131958 2134927 . - . ID=Thaps5788.1;Parent=Thaps5788;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2135178 2135942 . + . ID=Thaps5789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W8];external_name=Thaps5789;logic_name=jgi_thaps3 chr5 ensembl transcript 2135178 2135942 . + . ID=Thaps5789;Parent=Thaps5789;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2135178 2135942 . + 0 ID=Thaps5789;Parent=Thaps5789;rank=1 chr5 . exon 2135178 2135942 . + . ID=Thaps5789.1;Parent=Thaps5789;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2136329 2137543 . - . ID=Thaps5790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3W9];external_name=Thaps5790;logic_name=jgi_thaps3 chr5 ensembl transcript 2136329 2137543 . - . ID=Thaps5790;Parent=Thaps5790;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2136329 2137543 . - 0 ID=Thaps5790;Parent=Thaps5790;rank=1 chr5 . exon 2136329 2137543 . - . ID=Thaps5790.1;Parent=Thaps5790;constitutive=1;rank=1 chr5 . repeat_region 2140814 2140822 . ? . description=dust chr5 ensembl protein_coding_gene 2141014 2142930 . + . ID=Thaps268970;biotype=protein_coding;description=D-3-phosphoglycerate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C3X1];external_name=Thaps268970;logic_name=jgi_thaps3 chr5 ensembl transcript 2141014 2142930 . + . ID=Thaps268970;Parent=Thaps268970;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2141014 2141238 . + 0 ID=Thaps268970;Parent=Thaps268970;rank=1 chr5 . exon 2141014 2141238 . + . ID=Thaps268970.1;Parent=Thaps268970;constitutive=1;rank=1 chr5 . CDS 2141630 2142086 . + 0 ID=Thaps268970;Parent=Thaps268970;rank=2 chr5 . exon 2141630 2142086 . + . ID=Thaps268970.2;Parent=Thaps268970;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2142173 2142930 . + 0 ID=Thaps268970;Parent=Thaps268970;rank=3 chr5 . exon 2142173 2142930 . + . ID=Thaps268970.3;Parent=Thaps268970;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 2138274 2140182 . + . ID=Thaps34044;biotype=protein_coding;description=DNA-binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3X0];external_name=Thaps34044;logic_name=jgi_thaps3 chr5 ensembl transcript 2138274 2140182 . + . ID=Thaps34044;Parent=Thaps34044;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2138274 2138402 . + 0 ID=Thaps34044;Parent=Thaps34044;rank=1 chr5 . exon 2138274 2138402 . + . ID=Thaps34044.1;Parent=Thaps34044;constitutive=1;rank=1 chr5 . CDS 2138586 2138636 . + 0 ID=Thaps34044;Parent=Thaps34044;rank=2 chr5 . exon 2138586 2138636 . + . ID=Thaps34044.2;Parent=Thaps34044;constitutive=1;rank=2 chr5 . CDS 2138760 2138868 . + 0 ID=Thaps34044;Parent=Thaps34044;rank=3 chr5 . exon 2138760 2138868 . + . ID=Thaps34044.3;Parent=Thaps34044;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 2139464 2140182 . + 0 ID=Thaps34044;Parent=Thaps34044;rank=4 chr5 . exon 2139464 2140182 . + . ID=Thaps34044.4;Parent=Thaps34044;constitutive=1;ensembl_end_phase=2;rank=4 chr5 ensembl protein_coding_gene 2143176 2143758 . - . ID=Thaps5793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3X2];external_name=Thaps5793;logic_name=jgi_thaps3 chr5 ensembl transcript 2143176 2143758 . - . ID=Thaps5793;Parent=Thaps5793;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2143176 2143385 . - 0 ID=Thaps5793;Parent=Thaps5793;rank=2 chr5 . exon 2143176 2143385 . - . ID=Thaps5793.2;Parent=Thaps5793;constitutive=1;rank=2 chr5 . CDS 2143477 2143758 . - 0 ID=Thaps5793;Parent=Thaps5793;rank=1 chr5 . exon 2143477 2143758 . - . ID=Thaps5793.1;Parent=Thaps5793;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2144344 2146113 . + . ID=Thaps5794;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3X3];external_name=Thaps5794;logic_name=jgi_thaps3 chr5 ensembl transcript 2144344 2146113 . + . ID=Thaps5794;Parent=Thaps5794;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2144344 2145135 . + 0 ID=Thaps5794;Parent=Thaps5794;rank=1 chr5 . exon 2144344 2145135 . + . ID=Thaps5794.1;Parent=Thaps5794;constitutive=1;rank=1 chr5 . CDS 2145253 2146113 . + 0 ID=Thaps5794;Parent=Thaps5794;rank=2 chr5 . exon 2145253 2146113 . + . ID=Thaps5794.2;Parent=Thaps5794;constitutive=1;rank=2 chr5 . repeat_region 2154535 2154581 . ? . description=trf chr5 ensembl protein_coding_gene 2152048 2162769 . - . ID=Thaps22922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3X7];external_name=Thaps22922;logic_name=jgi_thaps3 chr5 ensembl transcript 2152048 2162769 . - . ID=Thaps22922;Parent=Thaps22922;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2152048 2152498 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=16 chr5 . exon 2152048 2152498 . - . ID=Thaps22922.16;Parent=Thaps22922;constitutive=1;ensembl_end_phase=1;rank=16 chr5 . CDS 2152583 2152619 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=15 chr5 . exon 2152583 2152619 . - . ID=Thaps22922.15;Parent=Thaps22922;constitutive=1;ensembl_end_phase=1;rank=15 chr5 . CDS 2152681 2152881 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=14 chr5 . exon 2152681 2152881 . - . ID=Thaps22922.14;Parent=Thaps22922;constitutive=1;rank=14 chr5 . CDS 2152950 2153128 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=13 chr5 . exon 2152950 2153128 . - . ID=Thaps22922.13;Parent=Thaps22922;constitutive=1;ensembl_end_phase=2;rank=13 chr5 . CDS 2153211 2153307 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=12 chr5 . exon 2153211 2153307 . - . ID=Thaps22922.12;Parent=Thaps22922;constitutive=1;ensembl_end_phase=1;rank=12 chr5 . CDS 2153382 2153753 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=11 chr5 . exon 2153382 2153753 . - . ID=Thaps22922.11;Parent=Thaps22922;constitutive=1;rank=11 chr5 . CDS 2153825 2154088 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=10 chr5 . exon 2153825 2154088 . - . ID=Thaps22922.10;Parent=Thaps22922;constitutive=1;rank=10 chr5 . CDS 2154171 2154525 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=9 chr5 . exon 2154171 2154525 . - . ID=Thaps22922.9;Parent=Thaps22922;constitutive=1;ensembl_end_phase=1;rank=9 chr5 . CDS 2154620 2155885 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=8 chr5 . exon 2154620 2155885 . - . ID=Thaps22922.8;Parent=Thaps22922;constitutive=1;rank=8 chr5 . CDS 2156025 2156408 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=7 chr5 . exon 2156025 2156408 . - . ID=Thaps22922.7;Parent=Thaps22922;constitutive=1;rank=7 chr5 . CDS 2156473 2158271 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=6 chr5 . CDS 2158370 2158938 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=5 chr5 . CDS 2159030 2160414 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=4 chr5 . CDS 2160504 2161945 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=3 chr5 . CDS 2162074 2162603 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=2 chr5 . CDS 2162702 2162769 . - 0 ID=Thaps22922;Parent=Thaps22922;rank=1 chr5 ensembl protein_coding_gene 2146647 2147114 . + . ID=Thaps5795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3X4];external_name=Thaps5795;logic_name=jgi_thaps3 chr5 ensembl transcript 2146647 2147114 . + . ID=Thaps5795;Parent=Thaps5795;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2146647 2147114 . + 0 ID=Thaps5795;Parent=Thaps5795;rank=1 chr5 . exon 2146647 2147114 . + . ID=Thaps5795.1;Parent=Thaps5795;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2147864 2149228 . + . ID=Thaps5796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3X5];external_name=Thaps5796;logic_name=jgi_thaps3 chr5 ensembl transcript 2147864 2149228 . + . ID=Thaps5796;Parent=Thaps5796;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2147864 2149228 . + 0 ID=Thaps5796;Parent=Thaps5796;rank=1 chr5 . exon 2147864 2149228 . + . ID=Thaps5796.1;Parent=Thaps5796;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2150607 2151521 . - . ID=Thaps5797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3X6];external_name=Thaps5797;logic_name=jgi_thaps3 chr5 ensembl transcript 2150607 2151521 . - . ID=Thaps5797;Parent=Thaps5797;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2150607 2151521 . - 0 ID=Thaps5797;Parent=Thaps5797;rank=1 chr5 . exon 2150607 2151521 . - . ID=Thaps5797.1;Parent=Thaps5797;constitutive=1;rank=1 chr5 . repeat_region 2163043 2163079 . ? . description=dust chr5 . exon 2156473 2158271 . - . ID=Thaps22922.6;Parent=Thaps22922;constitutive=1;ensembl_end_phase=2;rank=6 chr5 . exon 2158370 2158938 . - . ID=Thaps22922.5;Parent=Thaps22922;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . exon 2159030 2160414 . - . ID=Thaps22922.4;Parent=Thaps22922;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . exon 2160504 2161945 . - . ID=Thaps22922.3;Parent=Thaps22922;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . exon 2162074 2162603 . - . ID=Thaps22922.2;Parent=Thaps22922;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 2162702 2162769 . - . ID=Thaps22922.1;Parent=Thaps22922;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 2166048 2167086 . - . ID=Thaps262659;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3X9];external_name=Thaps262659;logic_name=jgi_thaps3 chr5 ensembl transcript 2166048 2167086 . - . ID=Thaps262659;Parent=Thaps262659;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2166048 2166217 . - 0 ID=Thaps262659;Parent=Thaps262659;rank=3 chr5 . exon 2166048 2166217 . - . ID=Thaps262659.3;Parent=Thaps262659;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2166328 2166883 . - 0 ID=Thaps262659;Parent=Thaps262659;rank=2 chr5 . CDS 2167003 2167086 . - 0 ID=Thaps262659;Parent=Thaps262659;rank=1 chr5 ensembl protein_coding_gene 2163101 2164546 . + . ID=Thaps5799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3X8];external_name=Thaps5799;logic_name=jgi_thaps3 chr5 ensembl transcript 2163101 2164546 . + . ID=Thaps5799;Parent=Thaps5799;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2163101 2164546 . + 0 ID=Thaps5799;Parent=Thaps5799;rank=1 chr5 . exon 2163101 2164546 . + . ID=Thaps5799.1;Parent=Thaps5799;constitutive=1;rank=1 chr5 . repeat_region 2174611 2174630 . ? . description=trf chr5 . repeat_region 2175063 2175094 . ? . description=trf chr5 ensembl snoRNA_gene 2175660 2175760 . + . ID=EPrTPOG00000000067;biotype=snoRNA;description=Small nucleolar RNA SNORD14 [Source:RFAM%3BAcc:RF00016];external_name=SNORD14;logic_name=ncrna_eg chr5 ensembl snoRNA 2175660 2175760 . + . ID=EPrTPOT00000000067;Parent=EPrTPOG00000000067;biotype=snoRNA;logic_name=ncrna_eg chr5 . exon 2175660 2175760 . + . ID=EPrTPOE00000000067;Parent=EPrTPOT00000000067;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 2166328 2166883 . - . ID=Thaps262659.2;Parent=Thaps262659;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 2167003 2167086 . - . ID=Thaps262659.1;Parent=Thaps262659;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2172412 2175859 . - . ID=Thaps28441;biotype=protein_coding;description=Eukaryotic translation initiation factor 3 subunit 8 [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y2];external_name=Thaps28441;logic_name=jgi_thaps3 chr5 ensembl transcript 2172412 2175859 . - . ID=Thaps28441;Parent=Thaps28441;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2172412 2173733 . - 0 ID=Thaps28441;Parent=Thaps28441;rank=4 chr5 . exon 2172412 2173733 . - . ID=Thaps28441.4;Parent=Thaps28441;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 2173981 2174415 . - 0 ID=Thaps28441;Parent=Thaps28441;rank=3 chr5 . exon 2173981 2174415 . - . ID=Thaps28441.3;Parent=Thaps28441;constitutive=1;rank=3 chr5 . CDS 2175091 2175522 . - 0 ID=Thaps28441;Parent=Thaps28441;rank=2 chr5 . exon 2175091 2175522 . - . ID=Thaps28441.2;Parent=Thaps28441;constitutive=1;rank=2 chr5 . CDS 2175844 2175859 . - 0 ID=Thaps28441;Parent=Thaps28441;rank=1 chr5 . exon 2175844 2175859 . - . ID=Thaps28441.1;Parent=Thaps28441;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2168699 2169854 . + . ID=Thaps5801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y0];external_name=Thaps5801;logic_name=jgi_thaps3 chr5 ensembl transcript 2168699 2169854 . + . ID=Thaps5801;Parent=Thaps5801;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2168699 2169854 . + 0 ID=Thaps5801;Parent=Thaps5801;rank=1 chr5 . exon 2168699 2169854 . + . ID=Thaps5801.1;Parent=Thaps5801;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2169977 2171046 . + . ID=Thaps5802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y1];external_name=Thaps5802;logic_name=jgi_thaps3 chr5 ensembl transcript 2169977 2171046 . + . ID=Thaps5802;Parent=Thaps5802;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2169977 2170007 . + 0 ID=Thaps5802;Parent=Thaps5802;rank=1 chr5 . exon 2169977 2170007 . + . ID=Thaps5802.1;Parent=Thaps5802;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2170133 2171046 . + 0 ID=Thaps5802;Parent=Thaps5802;rank=2 chr5 . exon 2170133 2171046 . + . ID=Thaps5802.2;Parent=Thaps5802;constitutive=1;ensembl_end_phase=2;rank=2 chr5 ensembl protein_coding_gene 2181678 2183404 . - . ID=Thaps268976;biotype=protein_coding;description=Presenilin [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y7];external_name=Thaps268976;logic_name=jgi_thaps3 chr5 ensembl transcript 2181678 2183404 . - . ID=Thaps268976;Parent=Thaps268976;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2181678 2181991 . - 0 ID=Thaps268976;Parent=Thaps268976;rank=5 chr5 . exon 2181678 2181991 . - . ID=Thaps268976.5;Parent=Thaps268976;constitutive=1;ensembl_end_phase=2;rank=5 chr5 . CDS 2182310 2182425 . - 0 ID=Thaps268976;Parent=Thaps268976;rank=4 chr5 . exon 2182310 2182425 . - . ID=Thaps268976.4;Parent=Thaps268976;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 2182538 2182556 . - 0 ID=Thaps268976;Parent=Thaps268976;rank=3 chr5 . exon 2182538 2182556 . - . ID=Thaps268976.3;Parent=Thaps268976;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 2182610 2183058 . - 0 ID=Thaps268976;Parent=Thaps268976;rank=2 chr5 . exon 2182610 2183058 . - . ID=Thaps268976.2;Parent=Thaps268976;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2183193 2183404 . - 0 ID=Thaps268976;Parent=Thaps268976;rank=1 chr5 . exon 2183193 2183404 . - . ID=Thaps268976.1;Parent=Thaps268976;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 2176707 2177360 . + . ID=Thaps28443;biotype=protein_coding;description=RL10%2C ribosomal protein 10 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y3];external_name=RL10;logic_name=jgi_thaps3 chr5 ensembl transcript 2176707 2177360 . + . ID=Thaps28443;Parent=Thaps28443;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2176707 2177360 . + 0 ID=Thaps28443;Parent=Thaps28443;rank=1 chr5 . exon 2176707 2177360 . + . ID=Thaps28443.1;Parent=Thaps28443;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2178114 2178849 . + . ID=Thaps5805;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y4];external_name=Thaps5805;logic_name=jgi_thaps3 chr5 ensembl transcript 2178114 2178849 . + . ID=Thaps5805;Parent=Thaps5805;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2178114 2178383 . + 0 ID=Thaps5805;Parent=Thaps5805;rank=1 chr5 . exon 2178114 2178383 . + . ID=Thaps5805.1;Parent=Thaps5805;constitutive=1;rank=1 chr5 . CDS 2178491 2178527 . + 0 ID=Thaps5805;Parent=Thaps5805;rank=2 chr5 . exon 2178491 2178527 . + . ID=Thaps5805.2;Parent=Thaps5805;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2178567 2178627 . + 0 ID=Thaps5805;Parent=Thaps5805;rank=3 chr5 . exon 2178567 2178627 . + . ID=Thaps5805.3;Parent=Thaps5805;constitutive=1;ensembl_end_phase=1;rank=3 chr5 . CDS 2178702 2178849 . + 0 ID=Thaps5805;Parent=Thaps5805;rank=4 chr5 . exon 2178702 2178849 . + . ID=Thaps5805.4;Parent=Thaps5805;constitutive=1;ensembl_end_phase=1;rank=4 chr5 ensembl protein_coding_gene 2179025 2180035 . - . ID=Thaps5806;biotype=protein_coding;description=Component II%2C glutamine amidotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y5];external_name=Thaps5806;logic_name=jgi_thaps3 chr5 ensembl transcript 2179025 2180035 . - . ID=Thaps5806;Parent=Thaps5806;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2179025 2180035 . - 0 ID=Thaps5806;Parent=Thaps5806;rank=1 chr5 . exon 2179025 2180035 . - . ID=Thaps5806.1;Parent=Thaps5806;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2180582 2181433 . + . ID=Thaps5807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y6];external_name=Thaps5807;logic_name=jgi_thaps3 chr5 ensembl transcript 2180582 2181433 . + . ID=Thaps5807;Parent=Thaps5807;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2180582 2180741 . + 0 ID=Thaps5807;Parent=Thaps5807;rank=1 chr5 . exon 2180582 2180741 . + . ID=Thaps5807.1;Parent=Thaps5807;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2180830 2181062 . + 0 ID=Thaps5807;Parent=Thaps5807;rank=2 chr5 . exon 2180830 2181062 . + . ID=Thaps5807.2;Parent=Thaps5807;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2181395 2181433 . + 0 ID=Thaps5807;Parent=Thaps5807;rank=3 chr5 . exon 2181395 2181433 . + . ID=Thaps5807.3;Parent=Thaps5807;constitutive=1;rank=3 chr5 . repeat_region 2189011 2189125 . ? . description=trf chr5 . repeat_region 2189073 2189125 . ? . description=trf chr5 . repeat_region 2189976 2190008 . ? . description=trf chr5 . repeat_region 2191142 2191150 . ? . description=dust chr5 ensembl protein_coding_gene 2191291 2191548 . - . ID=Thaps20267;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y9];external_name=Thaps20267;logic_name=jgi_thaps3 chr5 ensembl transcript 2191291 2191548 . - . ID=Thaps20267;Parent=Thaps20267;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2191291 2191548 . - 0 ID=Thaps20267;Parent=Thaps20267;rank=1 chr5 . exon 2191291 2191548 . - . ID=Thaps20267.1;Parent=Thaps20267;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2191760 2194021 . + . ID=Thaps22928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z0];external_name=Thaps22928;logic_name=jgi_thaps3 chr5 ensembl transcript 2191760 2194021 . + . ID=Thaps22928;Parent=Thaps22928;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2191760 2194021 . + 0 ID=Thaps22928;Parent=Thaps22928;rank=1 chr5 . exon 2191760 2194021 . + . ID=Thaps22928.1;Parent=Thaps22928;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2189336 2190247 . + . ID=Thaps5809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Y8];external_name=Thaps5809;logic_name=jgi_thaps3 chr5 ensembl transcript 2189336 2190247 . + . ID=Thaps5809;Parent=Thaps5809;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2189336 2190247 . + 0 ID=Thaps5809;Parent=Thaps5809;rank=1 chr5 . exon 2189336 2190247 . + . ID=Thaps5809.1;Parent=Thaps5809;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2194058 2194549 . - . ID=Thaps5812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z1];external_name=Thaps5812;logic_name=jgi_thaps3 chr5 ensembl transcript 2194058 2194549 . - . ID=Thaps5812;Parent=Thaps5812;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2194058 2194549 . - 0 ID=Thaps5812;Parent=Thaps5812;rank=1 chr5 . exon 2194058 2194549 . - . ID=Thaps5812.1;Parent=Thaps5812;constitutive=1;rank=1 chr5 ensembl tRNA_gene 2200260 2200341 . + . ID=EPrTPOG00000000071;biotype=tRNA;description=tRNA-Leu for anticodon AAG [Source:TRNASCAN_SE%3BAcc:tRNA-Leu];external_name=tRNA-Leu;logic_name=ncrna_eg chr5 ensembl transcript 2200260 2200341 . + . ID=EPrTPOT00000000071;Parent=EPrTPOG00000000071;biotype=tRNA;logic_name=ncrna_eg chr5 . exon 2200260 2200341 . + . ID=EPrTPOE00000000071;Parent=EPrTPOT00000000071;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2196633 2200105 . - . ID=Thaps22929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z2];external_name=Thaps22929;logic_name=jgi_thaps3 chr5 ensembl transcript 2196633 2200105 . - . ID=Thaps22929;Parent=Thaps22929;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2196633 2196844 . - 0 ID=Thaps22929;Parent=Thaps22929;rank=2 chr5 . exon 2196633 2196844 . - . ID=Thaps22929.2;Parent=Thaps22929;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2196985 2200105 . - 0 ID=Thaps22929;Parent=Thaps22929;rank=1 chr5 . exon 2196985 2200105 . - . ID=Thaps22929.1;Parent=Thaps22929;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2204671 2207562 . + . ID=Thaps22931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z5];external_name=Thaps22931;logic_name=jgi_thaps3 chr5 ensembl transcript 2204671 2207562 . + . ID=Thaps22931;Parent=Thaps22931;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2204671 2207562 . + 0 ID=Thaps22931;Parent=Thaps22931;rank=1 chr5 . exon 2204671 2207562 . + . ID=Thaps22931.1;Parent=Thaps22931;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2201394 2202233 . - . ID=Thaps34348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z3];external_name=Thaps34348;logic_name=jgi_thaps3 chr5 ensembl transcript 2201394 2202233 . - . ID=Thaps34348;Parent=Thaps34348;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2201394 2201651 . - 0 ID=Thaps34348;Parent=Thaps34348;rank=2 chr5 . exon 2201394 2201651 . - . ID=Thaps34348.2;Parent=Thaps34348;constitutive=1;rank=2 chr5 . CDS 2201706 2202233 . - 0 ID=Thaps34348;Parent=Thaps34348;rank=1 chr5 . exon 2201706 2202233 . - . ID=Thaps34348.1;Parent=Thaps34348;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2203680 2204461 . + . ID=Thaps5815;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z4];external_name=Thaps5815;logic_name=jgi_thaps3 chr5 ensembl transcript 2203680 2204461 . + . ID=Thaps5815;Parent=Thaps5815;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2203680 2203827 . + 0 ID=Thaps5815;Parent=Thaps5815;rank=1 chr5 . exon 2203680 2203827 . + . ID=Thaps5815.1;Parent=Thaps5815;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2203968 2204461 . + 0 ID=Thaps5815;Parent=Thaps5815;rank=2 chr5 . exon 2203968 2204461 . + . ID=Thaps5815.2;Parent=Thaps5815;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . repeat_region 2213457 2213464 . ? . description=dust chr5 ensembl protein_coding_gene 2207768 2210220 . - . ID=Thaps22932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z6];external_name=Thaps22932;logic_name=jgi_thaps3 chr5 ensembl transcript 2207768 2210220 . - . ID=Thaps22932;Parent=Thaps22932;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2207768 2209579 . - 0 ID=Thaps22932;Parent=Thaps22932;rank=2 chr5 . exon 2207768 2209579 . - . ID=Thaps22932.2;Parent=Thaps22932;constitutive=1;rank=2 chr5 . CDS 2209711 2210220 . - 0 ID=Thaps22932;Parent=Thaps22932;rank=1 chr5 . exon 2209711 2210220 . - . ID=Thaps22932.1;Parent=Thaps22932;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2211521 2211779 . + . ID=Thaps262668;biotype=protein_coding;description=Putative uncharacterized protein HSF24 [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z7];external_name=HSF24;logic_name=jgi_thaps3 chr5 ensembl transcript 2211521 2211779 . + . ID=Thaps262668;Parent=Thaps262668;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2211521 2211779 . + 0 ID=Thaps262668;Parent=Thaps262668;rank=1 chr5 . exon 2211521 2211779 . + . ID=Thaps262668.1;Parent=Thaps262668;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2216524 2218193 . + . ID=Thaps13427;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z8];external_name=Thaps13427;logic_name=jgi_thaps3 chr5 ensembl transcript 2216524 2218193 . + . ID=Thaps13427;Parent=Thaps13427;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2216524 2216653 . + 0 ID=Thaps13427;Parent=Thaps13427;rank=1 chr5 . exon 2216524 2216653 . + . ID=Thaps13427.1;Parent=Thaps13427;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2216739 2217428 . + 0 ID=Thaps13427;Parent=Thaps13427;rank=2 chr5 . exon 2216739 2217428 . + . ID=Thaps13427.2;Parent=Thaps13427;constitutive=1;rank=2 chr5 . CDS 2217520 2218193 . + 0 ID=Thaps13427;Parent=Thaps13427;rank=3 chr5 . exon 2217520 2218193 . + . ID=Thaps13427.3;Parent=Thaps13427;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 2226166 2226719 . + . ID=Thaps20469;biotype=protein_coding;description=DNA directed RNA polymerase II subunit%2C 8.2kDa%2C rpb10-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C402];external_name=Thaps20469;logic_name=jgi_thaps3 chr5 ensembl transcript 2226166 2226719 . + . ID=Thaps20469;Parent=Thaps20469;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2226166 2226260 . + 0 ID=Thaps20469;Parent=Thaps20469;rank=1 chr5 . exon 2226166 2226260 . + . ID=Thaps20469.1;Parent=Thaps20469;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 2226623 2226719 . + 0 ID=Thaps20469;Parent=Thaps20469;rank=2 chr5 ensembl protein_coding_gene 2220544 2223735 . + . ID=Thaps22935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C400];external_name=Thaps22935;logic_name=jgi_thaps3 chr5 ensembl transcript 2220544 2223735 . + . ID=Thaps22935;Parent=Thaps22935;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2220544 2223735 . + 0 ID=Thaps22935;Parent=Thaps22935;rank=1 chr5 . exon 2220544 2223735 . + . ID=Thaps22935.1;Parent=Thaps22935;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2224628 2225317 . - . ID=Thaps268980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C401];external_name=Thaps268980;logic_name=jgi_thaps3 chr5 ensembl transcript 2224628 2225317 . - . ID=Thaps268980;Parent=Thaps268980;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2224628 2225317 . - 0 ID=Thaps268980;Parent=Thaps268980;rank=1 chr5 . exon 2224628 2225317 . - . ID=Thaps268980.1;Parent=Thaps268980;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2218737 2220156 . - . ID=Thaps5820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C3Z9];external_name=Thaps5820;logic_name=jgi_thaps3 chr5 ensembl transcript 2218737 2220156 . - . ID=Thaps5820;Parent=Thaps5820;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2218737 2219623 . - 0 ID=Thaps5820;Parent=Thaps5820;rank=2 chr5 . exon 2218737 2219623 . - . ID=Thaps5820.2;Parent=Thaps5820;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2219742 2220156 . - 0 ID=Thaps5820;Parent=Thaps5820;rank=1 chr5 . exon 2219742 2220156 . - . ID=Thaps5820.1;Parent=Thaps5820;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . repeat_region 2226464 2226477 . ? . description=dust chr5 . repeat_region 2226755 2226777 . ? . description=dust chr5 . repeat_region 2230719 2230770 . ? . description=dust chr5 . repeat_region 2231553 2231583 . ? . description=trf chr5 . repeat_region 2231553 2231583 . ? . description=dust chr5 . repeat_region 2235128 2235273 . ? . description=trf chr5 . repeat_region 2235550 2236162 . ? . description=trf chr5 . exon 2226623 2226719 . + . ID=Thaps20469.2;Parent=Thaps20469;constitutive=1;ensembl_end_phase=1;rank=2 chr5 ensembl protein_coding_gene 2232357 2234315 . + . ID=Thaps22939;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C405];external_name=Thaps22939;logic_name=jgi_thaps3 chr5 ensembl transcript 2232357 2234315 . + . ID=Thaps22939;Parent=Thaps22939;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2232357 2232501 . + 0 ID=Thaps22939;Parent=Thaps22939;rank=1 chr5 . exon 2232357 2232501 . + . ID=Thaps22939.1;Parent=Thaps22939;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2232649 2233792 . + 0 ID=Thaps22939;Parent=Thaps22939;rank=2 chr5 . exon 2232649 2233792 . + . ID=Thaps22939.2;Parent=Thaps22939;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2234069 2234315 . + 0 ID=Thaps22939;Parent=Thaps22939;rank=3 chr5 . exon 2234069 2234315 . + . ID=Thaps22939.3;Parent=Thaps22939;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 2234455 2239963 . - . ID=Thaps22940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C406];external_name=Thaps22940;logic_name=jgi_thaps3 chr5 ensembl transcript 2234455 2239963 . - . ID=Thaps22940;Parent=Thaps22940;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2234455 2236282 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=13 chr5 . exon 2234455 2236282 . - . ID=Thaps22940.13;Parent=Thaps22940;constitutive=1;ensembl_end_phase=1;rank=13 chr5 . CDS 2236303 2236387 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=12 chr5 . CDS 2236474 2237581 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=11 chr5 . CDS 2237661 2237723 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=10 chr5 . CDS 2237808 2237879 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=9 chr5 . CDS 2237970 2238029 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=8 chr5 . CDS 2238115 2238174 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=7 chr5 . CDS 2238424 2238480 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=6 chr5 . CDS 2238596 2238637 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=5 chr5 . CDS 2238731 2238787 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=4 chr5 . CDS 2238921 2239358 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=3 chr5 . CDS 2239451 2239574 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=2 chr5 . CDS 2239692 2239963 . - 0 ID=Thaps22940;Parent=Thaps22940;rank=1 chr5 ensembl protein_coding_gene 2229595 2230290 . - . ID=Thaps262671;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C404];external_name=Thaps262671;logic_name=jgi_thaps3 chr5 ensembl transcript 2229595 2230290 . - . ID=Thaps262671;Parent=Thaps262671;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2229595 2230290 . - 0 ID=Thaps262671;Parent=Thaps262671;rank=1 chr5 . exon 2229595 2230290 . - . ID=Thaps262671.1;Parent=Thaps262671;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2227037 2229201 . - . ID=Thaps5824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C403];external_name=Thaps5824;logic_name=jgi_thaps3 chr5 ensembl transcript 2227037 2229201 . - . ID=Thaps5824;Parent=Thaps5824;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2227037 2227116 . - 0 ID=Thaps5824;Parent=Thaps5824;rank=3 chr5 . exon 2227037 2227116 . - . ID=Thaps5824.3;Parent=Thaps5824;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2227269 2228428 . - 0 ID=Thaps5824;Parent=Thaps5824;rank=2 chr5 . exon 2227269 2228428 . - . ID=Thaps5824.2;Parent=Thaps5824;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2228519 2229201 . - 0 ID=Thaps5824;Parent=Thaps5824;rank=1 chr5 . exon 2228519 2229201 . - . ID=Thaps5824.1;Parent=Thaps5824;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . exon 2236303 2236387 . - . ID=Thaps22940.12;Parent=Thaps22940;constitutive=1;ensembl_end_phase=1;rank=12 chr5 . exon 2236474 2237581 . - . ID=Thaps22940.11;Parent=Thaps22940;constitutive=1;ensembl_end_phase=1;rank=11 chr5 . exon 2237661 2237723 . - . ID=Thaps22940.10;Parent=Thaps22940;constitutive=1;rank=10 chr5 . exon 2237808 2237879 . - . ID=Thaps22940.9;Parent=Thaps22940;constitutive=1;rank=9 chr5 . exon 2237970 2238029 . - . ID=Thaps22940.8;Parent=Thaps22940;constitutive=1;rank=8 chr5 . exon 2238115 2238174 . - . ID=Thaps22940.7;Parent=Thaps22940;constitutive=1;rank=7 chr5 . exon 2238424 2238480 . - . ID=Thaps22940.6;Parent=Thaps22940;constitutive=1;rank=6 chr5 . exon 2238596 2238637 . - . ID=Thaps22940.5;Parent=Thaps22940;constitutive=1;rank=5 chr5 . exon 2238731 2238787 . - . ID=Thaps22940.4;Parent=Thaps22940;constitutive=1;rank=4 chr5 . exon 2238921 2239358 . - . ID=Thaps22940.3;Parent=Thaps22940;constitutive=1;rank=3 chr5 . exon 2239451 2239574 . - . ID=Thaps22940.2;Parent=Thaps22940;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . exon 2239692 2239963 . - . ID=Thaps22940.1;Parent=Thaps22940;constitutive=1;ensembl_end_phase=2;rank=1 chr5 ensembl protein_coding_gene 2241278 2242759 . + . ID=Thaps5828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C407];external_name=Thaps5828;logic_name=jgi_thaps3 chr5 ensembl transcript 2241278 2242759 . + . ID=Thaps5828;Parent=Thaps5828;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2241278 2242759 . + 0 ID=Thaps5828;Parent=Thaps5828;rank=1 chr5 . exon 2241278 2242759 . + . ID=Thaps5828.1;Parent=Thaps5828;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2243443 2254835 . + . ID=Thaps5829;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C408];external_name=Thaps5829;logic_name=jgi_thaps3 chr5 ensembl transcript 2243443 2254835 . + . ID=Thaps5829;Parent=Thaps5829;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2243443 2244472 . + 0 ID=Thaps5829;Parent=Thaps5829;rank=1 chr5 . exon 2243443 2244472 . + . ID=Thaps5829.1;Parent=Thaps5829;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2244563 2252534 . + 0 ID=Thaps5829;Parent=Thaps5829;rank=2 chr5 . exon 2244563 2252534 . + . ID=Thaps5829.2;Parent=Thaps5829;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2252576 2253484 . + 0 ID=Thaps5829;Parent=Thaps5829;rank=3 chr5 . CDS 2253534 2254800 . + 0 ID=Thaps5829;Parent=Thaps5829;rank=4 chr5 . CDS 2254821 2254835 . + 0 ID=Thaps5829;Parent=Thaps5829;rank=5 chr5 . exon 2252576 2253484 . + . ID=Thaps5829.3;Parent=Thaps5829;constitutive=1;rank=3 chr5 . exon 2253534 2254800 . + . ID=Thaps5829.4;Parent=Thaps5829;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . exon 2254821 2254835 . + . ID=Thaps5829.5;Parent=Thaps5829;constitutive=1;rank=5 chr5 ensembl protein_coding_gene 2255038 2255679 . - . ID=Thaps5830;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C409];external_name=Thaps5830;logic_name=jgi_thaps3 chr5 ensembl transcript 2255038 2255679 . - . ID=Thaps5830;Parent=Thaps5830;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2255038 2255679 . - 0 ID=Thaps5830;Parent=Thaps5830;rank=1 chr5 . exon 2255038 2255679 . - . ID=Thaps5830.1;Parent=Thaps5830;constitutive=1;rank=1 chr5 . repeat_region 2258680 2258687 . ? . description=dust chr5 . repeat_region 2258961 2258980 . ? . description=trf chr5 . repeat_region 2259498 2259524 . ? . description=dust chr5 . repeat_region 2260865 2260898 . ? . description=trf chr5 . repeat_region 2260865 2260901 . ? . description=dust chr5 . repeat_region 2260867 2260901 . ? . description=trf chr5 ensembl protein_coding_gene 2256792 2258810 . + . ID=Thaps22941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C410];external_name=Thaps22941;logic_name=jgi_thaps3 chr5 ensembl transcript 2256792 2258810 . + . ID=Thaps22941;Parent=Thaps22941;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2256792 2257008 . + 0 ID=Thaps22941;Parent=Thaps22941;rank=1 chr5 . exon 2256792 2257008 . + . ID=Thaps22941.1;Parent=Thaps22941;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2257094 2257135 . + 0 ID=Thaps22941;Parent=Thaps22941;rank=2 chr5 . exon 2257094 2257135 . + . ID=Thaps22941.2;Parent=Thaps22941;constitutive=1;rank=2 chr5 . CDS 2257219 2257310 . + 0 ID=Thaps22941;Parent=Thaps22941;rank=3 chr5 . exon 2257219 2257310 . + . ID=Thaps22941.3;Parent=Thaps22941;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2257416 2257598 . + 0 ID=Thaps22941;Parent=Thaps22941;rank=4 chr5 . exon 2257416 2257598 . + . ID=Thaps22941.4;Parent=Thaps22941;constitutive=1;rank=4 chr5 . CDS 2257710 2258810 . + 0 ID=Thaps22941;Parent=Thaps22941;rank=5 chr5 . exon 2257710 2258810 . + . ID=Thaps22941.5;Parent=Thaps22941;constitutive=1;rank=5 chr5 ensembl protein_coding_gene 2259548 2260647 . - . ID=Thaps5832;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C411];external_name=Thaps5832;logic_name=jgi_thaps3 chr5 ensembl transcript 2259548 2260647 . - . ID=Thaps5832;Parent=Thaps5832;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2259548 2259801 . - 0 ID=Thaps5832;Parent=Thaps5832;rank=4 chr5 . exon 2259548 2259801 . - . ID=Thaps5832.4;Parent=Thaps5832;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 2259985 2260116 . - 0 ID=Thaps5832;Parent=Thaps5832;rank=3 chr5 . exon 2259985 2260116 . - . ID=Thaps5832.3;Parent=Thaps5832;constitutive=1;rank=3 chr5 . CDS 2260203 2260250 . - 0 ID=Thaps5832;Parent=Thaps5832;rank=2 chr5 . exon 2260203 2260250 . - . ID=Thaps5832.2;Parent=Thaps5832;constitutive=1;rank=2 chr5 . CDS 2260503 2260647 . - 0 ID=Thaps5832;Parent=Thaps5832;rank=1 chr5 . exon 2260503 2260647 . - . ID=Thaps5832.1;Parent=Thaps5832;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2264947 2265866 . + . ID=Thaps5833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C412];external_name=Thaps5833;logic_name=jgi_thaps3 chr5 ensembl transcript 2264947 2265866 . + . ID=Thaps5833;Parent=Thaps5833;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2264947 2265351 . + 0 ID=Thaps5833;Parent=Thaps5833;rank=1 chr5 . exon 2264947 2265351 . + . ID=Thaps5833.1;Parent=Thaps5833;constitutive=1;rank=1 chr5 . CDS 2265546 2265592 . + 0 ID=Thaps5833;Parent=Thaps5833;rank=2 chr5 . exon 2265546 2265592 . + . ID=Thaps5833.2;Parent=Thaps5833;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . CDS 2265764 2265866 . + 0 ID=Thaps5833;Parent=Thaps5833;rank=3 chr5 . exon 2265764 2265866 . + . ID=Thaps5833.3;Parent=Thaps5833;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 2273183 2276134 . + . ID=Thaps22943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C416];external_name=Thaps22943;logic_name=jgi_thaps3 chr5 ensembl transcript 2273183 2276134 . + . ID=Thaps22943;Parent=Thaps22943;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2273183 2273691 . + 0 ID=Thaps22943;Parent=Thaps22943;rank=1 chr5 . exon 2273183 2273691 . + . ID=Thaps22943.1;Parent=Thaps22943;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 2273779 2274597 . + 0 ID=Thaps22943;Parent=Thaps22943;rank=2 chr5 . exon 2273779 2274597 . + . ID=Thaps22943.2;Parent=Thaps22943;constitutive=1;rank=2 chr5 . CDS 2274703 2276134 . + 0 ID=Thaps22943;Parent=Thaps22943;rank=3 chr5 . exon 2274703 2276134 . + . ID=Thaps22943.3;Parent=Thaps22943;constitutive=1;ensembl_end_phase=1;rank=3 chr5 ensembl protein_coding_gene 2267302 2267529 . + . ID=Thaps34289;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C413];external_name=Thaps34289;logic_name=jgi_thaps3 chr5 ensembl transcript 2267302 2267529 . + . ID=Thaps34289;Parent=Thaps34289;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2267302 2267529 . + 0 ID=Thaps34289;Parent=Thaps34289;rank=1 chr5 . exon 2267302 2267529 . + . ID=Thaps34289.1;Parent=Thaps34289;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2270308 2272877 . - . ID=Thaps40868;biotype=protein_coding;description=Endomembrane protein EMP70 precusor [Source:UniProtKB/TrEMBL%3BAcc:B8C415];external_name=Thaps40868;logic_name=jgi_thaps3 chr5 ensembl transcript 2270308 2272877 . - . ID=Thaps40868;Parent=Thaps40868;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2270308 2271049 . - 0 ID=Thaps40868;Parent=Thaps40868;rank=5 chr5 . exon 2270308 2271049 . - . ID=Thaps40868.5;Parent=Thaps40868;constitutive=1;ensembl_end_phase=1;rank=5 chr5 . CDS 2271095 2271377 . - 0 ID=Thaps40868;Parent=Thaps40868;rank=4 chr5 . exon 2271095 2271377 . - . ID=Thaps40868.4;Parent=Thaps40868;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 2271474 2271803 . - 0 ID=Thaps40868;Parent=Thaps40868;rank=3 chr5 . exon 2271474 2271803 . - . ID=Thaps40868.3;Parent=Thaps40868;constitutive=1;rank=3 chr5 . CDS 2271873 2272239 . - 0 ID=Thaps40868;Parent=Thaps40868;rank=2 chr5 . exon 2271873 2272239 . - . ID=Thaps40868.2;Parent=Thaps40868;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2272767 2272877 . - 0 ID=Thaps40868;Parent=Thaps40868;rank=1 chr5 . exon 2272767 2272877 . - . ID=Thaps40868.1;Parent=Thaps40868;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2269241 2270047 . + . ID=Thaps5835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C414];external_name=Thaps5835;logic_name=jgi_thaps3 chr5 ensembl transcript 2269241 2270047 . + . ID=Thaps5835;Parent=Thaps5835;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2269241 2270047 . + 0 ID=Thaps5835;Parent=Thaps5835;rank=1 chr5 . exon 2269241 2270047 . + . ID=Thaps5835.1;Parent=Thaps5835;constitutive=1;rank=1 chr5 . repeat_region 2281024 2281049 . ? . description=trf chr5 . repeat_region 2281024 2281049 . ? . description=dust chr5 ensembl protein_coding_gene 2280265 2284086 . + . ID=Thaps22944;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C420];external_name=Thaps22944;logic_name=jgi_thaps3 chr5 ensembl transcript 2280265 2284086 . + . ID=Thaps22944;Parent=Thaps22944;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2280265 2282774 . + 0 ID=Thaps22944;Parent=Thaps22944;rank=1 chr5 . exon 2280265 2282774 . + . ID=Thaps22944.1;Parent=Thaps22944;constitutive=1;ensembl_end_phase=2;rank=1 chr5 . CDS 2282850 2283090 . + 0 ID=Thaps22944;Parent=Thaps22944;rank=2 chr5 . exon 2282850 2283090 . + . ID=Thaps22944.2;Parent=Thaps22944;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2283175 2283759 . + 0 ID=Thaps22944;Parent=Thaps22944;rank=3 chr5 . exon 2283175 2283759 . + . ID=Thaps22944.3;Parent=Thaps22944;constitutive=1;rank=3 chr5 . CDS 2283841 2284086 . + 0 ID=Thaps22944;Parent=Thaps22944;rank=4 chr5 . exon 2283841 2284086 . + . ID=Thaps22944.4;Parent=Thaps22944;constitutive=1;rank=4 chr5 ensembl protein_coding_gene 2277554 2278381 . + . ID=Thaps262674;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C418];external_name=Thaps262674;logic_name=jgi_thaps3 chr5 ensembl transcript 2277554 2278381 . + . ID=Thaps262674;Parent=Thaps262674;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2277554 2278381 . + 0 ID=Thaps262674;Parent=Thaps262674;rank=1 chr5 . exon 2277554 2278381 . + . ID=Thaps262674.1;Parent=Thaps262674;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2284901 2285950 . - . ID=Thaps262675;biotype=protein_coding;external_name=Thaps262675;logic_name=jgi_thaps3 chr5 ensembl transcript 2284901 2285950 . - . ID=Thaps262675;Parent=Thaps262675;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2284901 2285136 . - 0 ID=Thaps262675;Parent=Thaps262675;rank=4 chr5 . exon 2284901 2285136 . - . ID=Thaps262675.4;Parent=Thaps262675;constitutive=1;ensembl_end_phase=2;rank=4 chr5 . CDS 2285203 2285258 . - 0 ID=Thaps262675;Parent=Thaps262675;rank=3 chr5 . exon 2285203 2285258 . - . ID=Thaps262675.3;Parent=Thaps262675;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2285341 2285448 . - 0 ID=Thaps262675;Parent=Thaps262675;rank=2 chr5 . exon 2285341 2285448 . - . ID=Thaps262675.2;Parent=Thaps262675;constitutive=1;rank=2 chr5 . CDS 2285464 2285950 . - 0 ID=Thaps262675;Parent=Thaps262675;rank=1 chr5 . exon 2285464 2285950 . - . ID=Thaps262675.1;Parent=Thaps262675;constitutive=1;ensembl_end_phase=1;rank=1 chr5 ensembl protein_coding_gene 2276733 2277236 . + . ID=Thaps5838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C417];external_name=Thaps5838;logic_name=jgi_thaps3 chr5 ensembl transcript 2276733 2277236 . + . ID=Thaps5838;Parent=Thaps5838;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2276733 2277236 . + 0 ID=Thaps5838;Parent=Thaps5838;rank=1 chr5 . exon 2276733 2277236 . + . ID=Thaps5838.1;Parent=Thaps5838;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2278703 2279266 . - . ID=Thaps5840;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C419];external_name=Thaps5840;logic_name=jgi_thaps3 chr5 ensembl transcript 2278703 2279266 . - . ID=Thaps5840;Parent=Thaps5840;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2278703 2279266 . - 0 ID=Thaps5840;Parent=Thaps5840;rank=1 chr5 . exon 2278703 2279266 . - . ID=Thaps5840.1;Parent=Thaps5840;constitutive=1;rank=1 chr5 ensembl protein_coding_gene 2289974 2291541 . + . ID=Thaps22946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C421];external_name=Thaps22946;logic_name=jgi_thaps3 chr5 ensembl transcript 2289974 2291541 . + . ID=Thaps22946;Parent=Thaps22946;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2289974 2290661 . + 0 ID=Thaps22946;Parent=Thaps22946;rank=1 chr5 . exon 2289974 2290661 . + . ID=Thaps22946.1;Parent=Thaps22946;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2291066 2291541 . + 0 ID=Thaps22946;Parent=Thaps22946;rank=2 chr5 . exon 2291066 2291541 . + . ID=Thaps22946.2;Parent=Thaps22946;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . repeat_region 2295995 2296279 . ? . description=trf chr5 . repeat_region 2296278 2296345 . ? . description=trf chr5 . repeat_region 2296403 2296419 . ? . description=dust chr5 . repeat_region 2297476 2297560 . + . description=SAT1_TP chr5 . repeat_region 2297561 2297713 . + . description=SAT1_TP chr5 . repeat_region 2297711 2297878 . + . description=SAT1_TP chr5 . repeat_region 2297722 2298601 . ? . description=trf chr5 . repeat_region 2297893 2298048 . + . description=SAT1_TP chr5 . repeat_region 2298050 2298223 . + . description=SAT1_TP chr5 . repeat_region 2298224 2298396 . + . description=SAT1_TP chr5 . repeat_region 2298398 2298571 . + . description=SAT1_TP chr5 . repeat_region 2299370 2299411 . ? . description=trf chr5 . repeat_region 2301020 2301120 . ? . description=trf chr5 . repeat_region 2301179 2301316 . ? . description=trf chr5 . repeat_region 2301342 2301367 . ? . description=trf chr5 . repeat_region 2301486 2301557 . + . description=Harbinger2_TP chr5 . repeat_region 2301517 2301564 . ? . description=trf chr5 . repeat_region 2301647 2301654 . ? . description=dust chr5 . repeat_region 2304935 2304962 . ? . description=trf chr5 . repeat_region 2304990 2305550 . ? . description=dust chr5 . repeat_region 2304998 2305549 . ? . description=trf chr5 . repeat_region 2305571 2305972 . ? . description=trf chr5 . repeat_region 2305571 2305972 . ? . description=dust chr5 ensembl gene 2297476 2298465 . + . ID=Thaps262676;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr5 ensembl transcript 2297476 2298465 . + . ID=Thaps262676;Parent=Thaps262676;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr5 . exon 2297476 2297568 . + . ID=Thaps262676.1;Parent=Thaps262676;constitutive=1;rank=1 chr5 . exon 2297896 2298065 . + . ID=Thaps262676.2;Parent=Thaps262676;constitutive=1;ensembl_end_phase=2;rank=2 chr5 . exon 2298413 2298465 . + . ID=Thaps262676.3;Parent=Thaps262676;constitutive=1;ensembl_end_phase=2;rank=3 chr5 ensembl protein_coding_gene 2299668 2300555 . + . ID=Thaps5844;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C422];external_name=Thaps5844;logic_name=jgi_thaps3 chr5 ensembl transcript 2299668 2300555 . + . ID=Thaps5844;Parent=Thaps5844;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2299668 2299797 . + 0 ID=Thaps5844;Parent=Thaps5844;rank=1 chr5 . exon 2299668 2299797 . + . ID=Thaps5844.1;Parent=Thaps5844;constitutive=1;ensembl_end_phase=1;rank=1 chr5 . CDS 2299881 2299968 . + 0 ID=Thaps5844;Parent=Thaps5844;rank=2 chr5 . exon 2299881 2299968 . + . ID=Thaps5844.2;Parent=Thaps5844;constitutive=1;ensembl_end_phase=1;rank=2 chr5 . CDS 2300061 2300092 . + 0 ID=Thaps5844;Parent=Thaps5844;rank=3 chr5 . exon 2300061 2300092 . + . ID=Thaps5844.3;Parent=Thaps5844;constitutive=1;ensembl_end_phase=2;rank=3 chr5 . CDS 2300172 2300253 . + 0 ID=Thaps5844;Parent=Thaps5844;rank=4 chr5 . exon 2300172 2300253 . + . ID=Thaps5844.4;Parent=Thaps5844;constitutive=1;ensembl_end_phase=1;rank=4 chr5 . CDS 2300351 2300555 . + 0 ID=Thaps5844;Parent=Thaps5844;rank=5 chr5 . exon 2300351 2300555 . + . ID=Thaps5844.5;Parent=Thaps5844;constitutive=1;ensembl_end_phase=1;rank=5 chr5 ensembl protein_coding_gene 2301607 2303220 . + . ID=Thaps5845;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C423];external_name=Thaps5845;logic_name=jgi_thaps3 chr5 ensembl transcript 2301607 2303220 . + . ID=Thaps5845;Parent=Thaps5845;biotype=protein_coding;logic_name=jgi_thaps3 chr5 . CDS 2301607 2303220 . + 0 ID=Thaps5845;Parent=Thaps5845;rank=1 chr5 . exon 2301607 2303220 . + . ID=Thaps5845.1;Parent=Thaps5845;constitutive=1;rank=1 ##gff-version 3 ##sequence-region 4 1 2402323 chr4 . repeat_region 1 293 . ? . description=trf chr4 . repeat_region 1 293 . ? . description=dust chr4 . repeat_region 847 914 . ? . description=trf chr4 . repeat_region 853 914 . ? . description=trf chr4 . repeat_region 865 925 . ? . description=dust chr4 . repeat_region 1001 1040 . ? . description=trf chr4 . repeat_region 1094 1342 . ? . description=trf chr4 . repeat_region 1101 1135 . ? . description=trf chr4 . repeat_region 1555 1574 . ? . description=trf chr4 . repeat_region 8836 8876 . + . description=TE1A_TP chr4 ensembl protein_coding_gene 4485 8729 . + . ID=Thaps22059;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0T1];external_name=Thaps22059;logic_name=jgi_thaps3 chr4 ensembl transcript 4485 8729 . + . ID=Thaps22059;Parent=Thaps22059;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 4485 4672 . + 0 ID=Thaps22059;Parent=Thaps22059;rank=1 chr4 . exon 4485 4672 . + . ID=Thaps22059.1;Parent=Thaps22059;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 4820 8729 . + 0 ID=Thaps22059;Parent=Thaps22059;rank=2 chr4 . exon 4820 8729 . + . ID=Thaps22059.2;Parent=Thaps22059;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 2304 3877 . - . ID=Thaps261991;biotype=protein_coding;description=Quinolinate synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C0T0];external_name=Thaps261991;logic_name=jgi_thaps3 chr4 ensembl transcript 2304 3877 . - . ID=Thaps261991;Parent=Thaps261991;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2304 3654 . - 0 ID=Thaps261991;Parent=Thaps261991;rank=2 chr4 . exon 2304 3654 . - . ID=Thaps261991.2;Parent=Thaps261991;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 3682 3877 . - 0 ID=Thaps261991;Parent=Thaps261991;rank=1 chr4 . exon 3682 3877 . - . ID=Thaps261991.1;Parent=Thaps261991;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 9271 10517 . + . ID=Thaps33589;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0T2];external_name=Thaps33589;logic_name=jgi_thaps3 chr4 ensembl transcript 9271 10517 . + . ID=Thaps33589;Parent=Thaps33589;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 9271 9547 . + 0 ID=Thaps33589;Parent=Thaps33589;rank=1 chr4 . exon 9271 9547 . + . ID=Thaps33589.1;Parent=Thaps33589;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 9675 9925 . + 0 ID=Thaps33589;Parent=Thaps33589;rank=2 chr4 . exon 9675 9925 . + . ID=Thaps33589.2;Parent=Thaps33589;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 10182 10517 . + 0 ID=Thaps33589;Parent=Thaps33589;rank=3 chr4 ensembl protein_coding_gene 1523 1981 . + . ID=Thaps4051;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0S9];external_name=Thaps4051;logic_name=jgi_thaps3 chr4 ensembl transcript 1523 1981 . + . ID=Thaps4051;Parent=Thaps4051;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1523 1981 . + 0 ID=Thaps4051;Parent=Thaps4051;rank=1 chr4 . exon 1523 1981 . + . ID=Thaps4051.1;Parent=Thaps4051;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 11126 14056 . - . ID=Thaps22062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0T3];external_name=Thaps22062;logic_name=jgi_thaps3 chr4 ensembl transcript 11126 14056 . - . ID=Thaps22062;Parent=Thaps22062;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 11126 14056 . - 0 ID=Thaps22062;Parent=Thaps22062;rank=1 chr4 . exon 11126 14056 . - . ID=Thaps22062.1;Parent=Thaps22062;constitutive=1;rank=1 chr4 . exon 10182 10517 . + . ID=Thaps33589.3;Parent=Thaps33589;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 25449 27039 . + . ID=Thaps22064;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0T5];external_name=Thaps22064;logic_name=jgi_thaps3 chr4 ensembl transcript 25449 27039 . + . ID=Thaps22064;Parent=Thaps22064;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 25449 25893 . + 0 ID=Thaps22064;Parent=Thaps22064;rank=1 chr4 . exon 25449 25893 . + . ID=Thaps22064.1;Parent=Thaps22064;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 25990 26403 . + 0 ID=Thaps22064;Parent=Thaps22064;rank=2 chr4 . exon 25990 26403 . + . ID=Thaps22064.2;Parent=Thaps22064;constitutive=1;rank=2 chr4 . CDS 26501 27039 . + 0 ID=Thaps22064;Parent=Thaps22064;rank=3 chr4 . exon 26501 27039 . + . ID=Thaps22064.3;Parent=Thaps22064;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 23995 24960 . - . ID=Thaps4058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0T4];external_name=Thaps4058;logic_name=jgi_thaps3 chr4 ensembl transcript 23995 24960 . - . ID=Thaps4058;Parent=Thaps4058;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 23995 24960 . - 0 ID=Thaps4058;Parent=Thaps4058;rank=1 chr4 . exon 23995 24960 . - . ID=Thaps4058.1;Parent=Thaps4058;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 31417 31829 . - . ID=Thaps261998;biotype=protein_coding;description=Frustulin protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0T6];external_name=FRU3;logic_name=jgi_thaps3 chr4 ensembl transcript 31417 31829 . - . ID=Thaps261998;Parent=Thaps261998;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 31417 31829 . - 0 ID=Thaps261998;Parent=Thaps261998;rank=1 chr4 . exon 31417 31829 . - . ID=Thaps261998.1;Parent=Thaps261998;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 39115 40160 . + . ID=Thaps262000;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0T7];external_name=Thaps262000;logic_name=jgi_thaps3 chr4 ensembl transcript 39115 40160 . + . ID=Thaps262000;Parent=Thaps262000;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 39115 39340 . + 0 ID=Thaps262000;Parent=Thaps262000;rank=1 chr4 . exon 39115 39340 . + . ID=Thaps262000.1;Parent=Thaps262000;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 39826 40160 . + 0 ID=Thaps262000;Parent=Thaps262000;rank=2 chr4 . exon 39826 40160 . + . ID=Thaps262000.2;Parent=Thaps262000;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . repeat_region 40162 40216 . ? . description=dust chr4 . repeat_region 42339 42396 . ? . description=trf chr4 . repeat_region 47644 47831 . ? . description=trf chr4 . repeat_region 48897 48945 . ? . description=dust chr4 ensembl protein_coding_gene 48356 49835 . - . ID=Thaps33726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0U0];external_name=Thaps33726;logic_name=jgi_thaps3 chr4 ensembl transcript 48356 49835 . - . ID=Thaps33726;Parent=Thaps33726;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 48356 48756 . - 0 ID=Thaps33726;Parent=Thaps33726;rank=4 chr4 . exon 48356 48756 . - . ID=Thaps33726.4;Parent=Thaps33726;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 48937 48967 . - 0 ID=Thaps33726;Parent=Thaps33726;rank=3 chr4 . exon 48937 48967 . - . ID=Thaps33726.3;Parent=Thaps33726;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 49053 49258 . - 0 ID=Thaps33726;Parent=Thaps33726;rank=2 chr4 . exon 49053 49258 . - . ID=Thaps33726.2;Parent=Thaps33726;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 49562 49835 . - 0 ID=Thaps33726;Parent=Thaps33726;rank=1 chr4 . exon 49562 49835 . - . ID=Thaps33726.1;Parent=Thaps33726;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 43027 44496 . - . ID=Thaps4061;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0T8];external_name=Thaps4061;logic_name=jgi_thaps3 chr4 ensembl transcript 43027 44496 . - . ID=Thaps4061;Parent=Thaps4061;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 43027 44196 . - 0 ID=Thaps4061;Parent=Thaps4061;rank=2 chr4 . exon 43027 44196 . - . ID=Thaps4061.2;Parent=Thaps4061;constitutive=1;rank=2 chr4 . CDS 44275 44496 . - 0 ID=Thaps4061;Parent=Thaps4061;rank=1 chr4 . exon 44275 44496 . - . ID=Thaps4061.1;Parent=Thaps4061;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 44766 45185 . + . ID=Thaps4062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0T9];external_name=Thaps4062;logic_name=jgi_thaps3 chr4 ensembl transcript 44766 45185 . + . ID=Thaps4062;Parent=Thaps4062;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 44766 45185 . + 0 ID=Thaps4062;Parent=Thaps4062;rank=1 chr4 . exon 44766 45185 . + . ID=Thaps4062.1;Parent=Thaps4062;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 50809 51972 . - . ID=Thaps4064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0U1];external_name=Thaps4064;logic_name=jgi_thaps3 chr4 ensembl transcript 50809 51972 . - . ID=Thaps4064;Parent=Thaps4064;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 50809 51972 . - 0 ID=Thaps4064;Parent=Thaps4064;rank=1 chr4 . exon 50809 51972 . - . ID=Thaps4064.1;Parent=Thaps4064;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 52895 53701 . - . ID=Thaps4065;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0U2];external_name=Thaps4065;logic_name=jgi_thaps3 chr4 ensembl transcript 52895 53701 . - . ID=Thaps4065;Parent=Thaps4065;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 52895 53701 . - 0 ID=Thaps4065;Parent=Thaps4065;rank=1 chr4 . exon 52895 53701 . - . ID=Thaps4065.1;Parent=Thaps4065;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 53964 56117 . + . ID=Thaps4066;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0U3];external_name=Thaps4066;logic_name=jgi_thaps3 chr4 ensembl transcript 53964 56117 . + . ID=Thaps4066;Parent=Thaps4066;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 53964 56117 . + 0 ID=Thaps4066;Parent=Thaps4066;rank=1 chr4 . exon 53964 56117 . + . ID=Thaps4066.1;Parent=Thaps4066;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 56285 57115 . - . ID=Thaps4067;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0U4];external_name=Thaps4067;logic_name=jgi_thaps3 chr4 ensembl transcript 56285 57115 . - . ID=Thaps4067;Parent=Thaps4067;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 56285 57115 . - 0 ID=Thaps4067;Parent=Thaps4067;rank=1 chr4 . exon 56285 57115 . - . ID=Thaps4067.1;Parent=Thaps4067;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 59379 60374 . + . ID=Thaps4068;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0U5];external_name=Thaps4068;logic_name=jgi_thaps3 chr4 ensembl transcript 59379 60374 . + . ID=Thaps4068;Parent=Thaps4068;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 59379 60374 . + 0 ID=Thaps4068;Parent=Thaps4068;rank=1 chr4 . exon 59379 60374 . + . ID=Thaps4068.1;Parent=Thaps4068;constitutive=1;rank=1 chr4 . repeat_region 60407 60802 . ? . description=trf chr4 . repeat_region 61004 61016 . ? . description=dust chr4 . repeat_region 65075 65082 . ? . description=dust chr4 . repeat_region 65549 65576 . ? . description=trf chr4 . repeat_region 66669 67627 . ? . description=trf chr4 . repeat_region 66669 67627 . ? . description=trf chr4 ensembl protein_coding_gene 64126 65021 . + . ID=Thaps18530;biotype=protein_coding;description=Ribonuclease [Source:UniProtKB/TrEMBL%3BAcc:B8C0U6];external_name=Thaps18530;logic_name=jgi_thaps3 chr4 ensembl transcript 64126 65021 . + . ID=Thaps18530;Parent=Thaps18530;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 64126 64166 . + 0 ID=Thaps18530;Parent=Thaps18530;rank=1 chr4 . exon 64126 64166 . + . ID=Thaps18530.1;Parent=Thaps18530;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 64289 64522 . + 0 ID=Thaps18530;Parent=Thaps18530;rank=2 chr4 . exon 64289 64522 . + . ID=Thaps18530.2;Parent=Thaps18530;constitutive=1;rank=2 chr4 . CDS 64646 64835 . + 0 ID=Thaps18530;Parent=Thaps18530;rank=3 chr4 . exon 64646 64835 . + . ID=Thaps18530.3;Parent=Thaps18530;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 64938 65021 . + 0 ID=Thaps18530;Parent=Thaps18530;rank=4 chr4 . exon 64938 65021 . + . ID=Thaps18530.4;Parent=Thaps18530;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 65858 66688 . + . ID=Thaps4070;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0U7];external_name=Thaps4070;logic_name=jgi_thaps3 chr4 ensembl transcript 65858 66688 . + . ID=Thaps4070;Parent=Thaps4070;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 65858 66688 . + 0 ID=Thaps4070;Parent=Thaps4070;rank=1 chr4 . exon 65858 66688 . + . ID=Thaps4070.1;Parent=Thaps4070;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 66757 72061 . - . ID=Thaps4071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0U8];external_name=Thaps4071;logic_name=jgi_thaps3 chr4 ensembl transcript 66757 72061 . - . ID=Thaps4071;Parent=Thaps4071;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 66757 66827 . - 0 ID=Thaps4071;Parent=Thaps4071;rank=7 chr4 . exon 66757 66827 . - . ID=Thaps4071.7;Parent=Thaps4071;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . CDS 66973 67020 . - 0 ID=Thaps4071;Parent=Thaps4071;rank=6 chr4 . exon 66973 67020 . - . ID=Thaps4071.6;Parent=Thaps4071;constitutive=1;rank=6 chr4 . CDS 67163 67210 . - 0 ID=Thaps4071;Parent=Thaps4071;rank=5 chr4 . exon 67163 67210 . - . ID=Thaps4071.5;Parent=Thaps4071;constitutive=1;rank=5 chr4 . CDS 67353 67400 . - 0 ID=Thaps4071;Parent=Thaps4071;rank=4 chr4 . exon 67353 67400 . - . ID=Thaps4071.4;Parent=Thaps4071;constitutive=1;rank=4 chr4 . CDS 67546 67593 . - 0 ID=Thaps4071;Parent=Thaps4071;rank=3 chr4 . exon 67546 67593 . - . ID=Thaps4071.3;Parent=Thaps4071;constitutive=1;rank=3 chr4 . CDS 67935 69357 . - 0 ID=Thaps4071;Parent=Thaps4071;rank=2 chr4 . exon 67935 69357 . - . ID=Thaps4071.2;Parent=Thaps4071;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 69446 72061 . - 0 ID=Thaps4071;Parent=Thaps4071;rank=1 chr4 . exon 69446 72061 . - . ID=Thaps4071.1;Parent=Thaps4071;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 76357 77681 . - . ID=Thaps262004;biotype=protein_coding;description=Cation channel [Source:UniProtKB/TrEMBL%3BAcc:B8C0V0];external_name=Thaps262004;logic_name=jgi_thaps3 chr4 ensembl transcript 76357 77681 . - . ID=Thaps262004;Parent=Thaps262004;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 76357 76893 . - 0 ID=Thaps262004;Parent=Thaps262004;rank=4 chr4 . exon 76357 76893 . - . ID=Thaps262004.4;Parent=Thaps262004;constitutive=1;rank=4 chr4 . CDS 76974 77119 . - 0 ID=Thaps262004;Parent=Thaps262004;rank=3 chr4 . exon 76974 77119 . - . ID=Thaps262004.3;Parent=Thaps262004;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 77153 77255 . - 0 ID=Thaps262004;Parent=Thaps262004;rank=2 chr4 . exon 77153 77255 . - . ID=Thaps262004.2;Parent=Thaps262004;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 77289 77681 . - 0 ID=Thaps262004;Parent=Thaps262004;rank=1 chr4 . exon 77289 77681 . - . ID=Thaps262004.1;Parent=Thaps262004;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 73034 73642 . - . ID=Thaps40148;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0U9];external_name=UBC2;logic_name=jgi_thaps3 chr4 ensembl transcript 73034 73642 . - . ID=Thaps40148;Parent=Thaps40148;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 73034 73468 . - 0 ID=Thaps40148;Parent=Thaps40148;rank=2 chr4 . exon 73034 73468 . - . ID=Thaps40148.2;Parent=Thaps40148;constitutive=1;rank=2 chr4 . CDS 73601 73642 . - 0 ID=Thaps40148;Parent=Thaps40148;rank=1 chr4 . exon 73601 73642 . - . ID=Thaps40148.1;Parent=Thaps40148;constitutive=1;rank=1 chr4 . repeat_region 82756 82764 . ? . description=dust chr4 . repeat_region 85137 85165 . ? . description=trf chr4 . repeat_region 87216 87244 . ? . description=trf chr4 ensembl protein_coding_gene 89470 90111 . - . ID=Thaps262006;biotype=protein_coding;description=Alpha carbonic anhydrase of nostoc-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0V5];external_name=Thaps262006;logic_name=jgi_thaps3 chr4 ensembl transcript 89470 90111 . - . ID=Thaps262006;Parent=Thaps262006;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 89470 89493 . - 0 ID=Thaps262006;Parent=Thaps262006;rank=3 chr4 . exon 89470 89493 . - . ID=Thaps262006.3;Parent=Thaps262006;constitutive=1;rank=3 chr4 . CDS 89539 89723 . - 0 ID=Thaps262006;Parent=Thaps262006;rank=2 chr4 . exon 89539 89723 . - . ID=Thaps262006.2;Parent=Thaps262006;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 89928 90111 . - 0 ID=Thaps262006;Parent=Thaps262006;rank=1 chr4 ensembl protein_coding_gene 82327 82901 . + . ID=Thaps4074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0V1];external_name=Thaps4074;logic_name=jgi_thaps3 chr4 ensembl transcript 82327 82901 . + . ID=Thaps4074;Parent=Thaps4074;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 82327 82395 . + 0 ID=Thaps4074;Parent=Thaps4074;rank=1 chr4 . exon 82327 82395 . + . ID=Thaps4074.1;Parent=Thaps4074;constitutive=1;rank=1 chr4 . CDS 82587 82901 . + 0 ID=Thaps4074;Parent=Thaps4074;rank=2 chr4 . exon 82587 82901 . + . ID=Thaps4074.2;Parent=Thaps4074;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 83285 84439 . + . ID=Thaps4075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0V2];external_name=Thaps4075;logic_name=jgi_thaps3 chr4 ensembl transcript 83285 84439 . + . ID=Thaps4075;Parent=Thaps4075;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 83285 84439 . + 0 ID=Thaps4075;Parent=Thaps4075;rank=1 chr4 . exon 83285 84439 . + . ID=Thaps4075.1;Parent=Thaps4075;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 85414 86568 . + . ID=Thaps4076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0V3];external_name=Thaps4076;logic_name=jgi_thaps3 chr4 ensembl transcript 85414 86568 . + . ID=Thaps4076;Parent=Thaps4076;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 85414 86568 . + 0 ID=Thaps4076;Parent=Thaps4076;rank=1 chr4 . exon 85414 86568 . + . ID=Thaps4076.1;Parent=Thaps4076;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 88012 88974 . + . ID=Thaps4077;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0V4];external_name=Thaps4077;logic_name=jgi_thaps3 chr4 ensembl transcript 88012 88974 . + . ID=Thaps4077;Parent=Thaps4077;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 88012 88974 . + 0 ID=Thaps4077;Parent=Thaps4077;rank=1 chr4 . exon 88012 88974 . + . ID=Thaps4077.1;Parent=Thaps4077;constitutive=1;rank=1 chr4 . exon 89928 90111 . - . ID=Thaps262006.1;Parent=Thaps262006;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 101998 102039 . ? . description=trf chr4 ensembl protein_coding_gene 108302 111604 . - . ID=Thaps22070;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0V7];external_name=Thaps22070;logic_name=jgi_thaps3 chr4 ensembl transcript 108302 111604 . - . ID=Thaps22070;Parent=Thaps22070;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 108302 110761 . - 0 ID=Thaps22070;Parent=Thaps22070;rank=2 chr4 . exon 108302 110761 . - . ID=Thaps22070.2;Parent=Thaps22070;constitutive=1;rank=2 chr4 . CDS 110927 111604 . - 0 ID=Thaps22070;Parent=Thaps22070;rank=1 chr4 ensembl protein_coding_gene 106402 107550 . + . ID=Thaps33759;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0V6];external_name=Thaps33759;logic_name=jgi_thaps3 chr4 ensembl transcript 106402 107550 . + . ID=Thaps33759;Parent=Thaps33759;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 106402 106770 . + 0 ID=Thaps33759;Parent=Thaps33759;rank=1 chr4 . exon 106402 106770 . + . ID=Thaps33759.1;Parent=Thaps33759;constitutive=1;rank=1 chr4 . CDS 106846 107550 . + 0 ID=Thaps33759;Parent=Thaps33759;rank=2 chr4 . exon 106846 107550 . + . ID=Thaps33759.2;Parent=Thaps33759;constitutive=1;rank=2 chr4 . repeat_region 112268 112275 . ? . description=dust chr4 . repeat_region 114587 114981 . + . description=Copia5LTR_TP chr4 . repeat_region 118112 118121 . ? . description=dust chr4 . exon 110927 111604 . - . ID=Thaps22070.1;Parent=Thaps22070;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 118642 123455 . + . ID=Thaps22071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0W0];external_name=Thaps22071;logic_name=jgi_thaps3 chr4 ensembl transcript 118642 123455 . + . ID=Thaps22071;Parent=Thaps22071;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 118642 118949 . + 0 ID=Thaps22071;Parent=Thaps22071;rank=1 chr4 . exon 118642 118949 . + . ID=Thaps22071.1;Parent=Thaps22071;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 119040 120194 . + 0 ID=Thaps22071;Parent=Thaps22071;rank=2 chr4 . exon 119040 120194 . + . ID=Thaps22071.2;Parent=Thaps22071;constitutive=1;rank=2 chr4 . CDS 120280 121421 . + 0 ID=Thaps22071;Parent=Thaps22071;rank=3 chr4 . CDS 121525 121719 . + 0 ID=Thaps22071;Parent=Thaps22071;rank=4 chr4 . CDS 121780 123455 . + 0 ID=Thaps22071;Parent=Thaps22071;rank=5 chr4 ensembl protein_coding_gene 113394 113810 . + . ID=Thaps262009;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0V8];external_name=Thaps262009;logic_name=jgi_thaps3 chr4 ensembl transcript 113394 113810 . + . ID=Thaps262009;Parent=Thaps262009;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 113394 113810 . + 0 ID=Thaps262009;Parent=Thaps262009;rank=1 chr4 . exon 113394 113810 . + . ID=Thaps262009.1;Parent=Thaps262009;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 115859 117244 . + . ID=Thaps4082;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0V9];external_name=Thaps4082;logic_name=jgi_thaps3 chr4 ensembl transcript 115859 117244 . + . ID=Thaps4082;Parent=Thaps4082;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 115859 117244 . + 0 ID=Thaps4082;Parent=Thaps4082;rank=1 chr4 . exon 115859 117244 . + . ID=Thaps4082.1;Parent=Thaps4082;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 126810 127850 . - . ID=Thaps17623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0W2];external_name=Thaps17623;logic_name=jgi_thaps3 chr4 ensembl transcript 126810 127850 . - . ID=Thaps17623;Parent=Thaps17623;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 126810 127175 . - 0 ID=Thaps17623;Parent=Thaps17623;rank=3 chr4 . exon 126810 127175 . - . ID=Thaps17623.3;Parent=Thaps17623;constitutive=1;rank=3 chr4 . CDS 127356 127435 . - 0 ID=Thaps17623;Parent=Thaps17623;rank=2 chr4 . exon 127356 127435 . - . ID=Thaps17623.2;Parent=Thaps17623;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 127598 127850 . - 0 ID=Thaps17623;Parent=Thaps17623;rank=1 chr4 . exon 127598 127850 . - . ID=Thaps17623.1;Parent=Thaps17623;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 120280 121421 . + . ID=Thaps22071.3;Parent=Thaps22071;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . exon 121525 121719 . + . ID=Thaps22071.4;Parent=Thaps22071;constitutive=1;rank=4 chr4 . exon 121780 123455 . + . ID=Thaps22071.5;Parent=Thaps22071;constitutive=1;ensembl_end_phase=2;rank=5 chr4 ensembl protein_coding_gene 125365 126355 . - . ID=Thaps4084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0W1];external_name=Thaps4084;logic_name=jgi_thaps3 chr4 ensembl transcript 125365 126355 . - . ID=Thaps4084;Parent=Thaps4084;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 125365 125631 . - 0 ID=Thaps4084;Parent=Thaps4084;rank=3 chr4 . exon 125365 125631 . - . ID=Thaps4084.3;Parent=Thaps4084;constitutive=1;rank=3 chr4 . CDS 125715 125949 . - 0 ID=Thaps4084;Parent=Thaps4084;rank=2 chr4 . exon 125715 125949 . - . ID=Thaps4084.2;Parent=Thaps4084;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 126069 126355 . - 0 ID=Thaps4084;Parent=Thaps4084;rank=1 chr4 . exon 126069 126355 . - . ID=Thaps4084.1;Parent=Thaps4084;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 129322 130878 . + . ID=Thaps4086;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0W3];external_name=Thaps4086;logic_name=jgi_thaps3 chr4 ensembl transcript 129322 130878 . + . ID=Thaps4086;Parent=Thaps4086;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 129322 130236 . + 0 ID=Thaps4086;Parent=Thaps4086;rank=1 chr4 . exon 129322 130236 . + . ID=Thaps4086.1;Parent=Thaps4086;constitutive=1;rank=1 chr4 . CDS 130600 130878 . + 0 ID=Thaps4086;Parent=Thaps4086;rank=2 chr4 . repeat_region 135462 135540 . ? . description=trf chr4 ensembl protein_coding_gene 134427 136004 . - . ID=Thaps22074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0W5];external_name=Thaps22074;logic_name=jgi_thaps3 chr4 ensembl transcript 134427 136004 . - . ID=Thaps22074;Parent=Thaps22074;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 134427 134595 . - 0 ID=Thaps22074;Parent=Thaps22074;rank=6 chr4 . exon 134427 134595 . - . ID=Thaps22074.6;Parent=Thaps22074;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 134682 134792 . - 0 ID=Thaps22074;Parent=Thaps22074;rank=5 chr4 . exon 134682 134792 . - . ID=Thaps22074.5;Parent=Thaps22074;constitutive=1;rank=5 chr4 . CDS 134888 135019 . - 0 ID=Thaps22074;Parent=Thaps22074;rank=4 chr4 . exon 134888 135019 . - . ID=Thaps22074.4;Parent=Thaps22074;constitutive=1;rank=4 chr4 . CDS 135117 135281 . - 0 ID=Thaps22074;Parent=Thaps22074;rank=3 chr4 . exon 135117 135281 . - . ID=Thaps22074.3;Parent=Thaps22074;constitutive=1;rank=3 chr4 . CDS 135411 135671 . - 0 ID=Thaps22074;Parent=Thaps22074;rank=2 chr4 . exon 135411 135671 . - . ID=Thaps22074.2;Parent=Thaps22074;constitutive=1;rank=2 chr4 . CDS 135805 136004 . - 0 ID=Thaps22074;Parent=Thaps22074;rank=1 chr4 . exon 135805 136004 . - . ID=Thaps22074.1;Parent=Thaps22074;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 136704 141493 . + . ID=Thaps22075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0W6];external_name=Thaps22075;logic_name=jgi_thaps3 chr4 ensembl transcript 136704 141493 . + . ID=Thaps22075;Parent=Thaps22075;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 136704 136996 . + 0 ID=Thaps22075;Parent=Thaps22075;rank=1 chr4 . exon 136704 136996 . + . ID=Thaps22075.1;Parent=Thaps22075;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 137122 137584 . + 0 ID=Thaps22075;Parent=Thaps22075;rank=2 chr4 . exon 137122 137584 . + . ID=Thaps22075.2;Parent=Thaps22075;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 137682 140929 . + 0 ID=Thaps22075;Parent=Thaps22075;rank=3 chr4 . exon 137682 140929 . + . ID=Thaps22075.3;Parent=Thaps22075;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 141022 141493 . + 0 ID=Thaps22075;Parent=Thaps22075;rank=4 chr4 ensembl protein_coding_gene 132447 133786 . + . ID=Thaps40156;biotype=protein_coding;description=ATP synthase gamma chain [Source:UniProtKB/TrEMBL%3BAcc:B8C0W4];external_name=Thaps40156;logic_name=jgi_thaps3 chr4 ensembl transcript 132447 133786 . + . ID=Thaps40156;Parent=Thaps40156;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 132447 132618 . + 0 ID=Thaps40156;Parent=Thaps40156;rank=1 chr4 . exon 132447 132618 . + . ID=Thaps40156.1;Parent=Thaps40156;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 132855 133786 . + 0 ID=Thaps40156;Parent=Thaps40156;rank=2 chr4 . exon 132855 133786 . + . ID=Thaps40156.2;Parent=Thaps40156;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . exon 130600 130878 . + . ID=Thaps4086.2;Parent=Thaps4086;constitutive=1;rank=2 chr4 . repeat_region 139810 139822 . ? . description=dust chr4 . repeat_region 148821 148828 . ? . description=dust chr4 . exon 141022 141493 . + . ID=Thaps22075.4;Parent=Thaps22075;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 142156 143207 . + . ID=Thaps268592;biotype=protein_coding;description=Violaxanthin de-epoxidase-like 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C0W7];external_name=Thaps268592;logic_name=jgi_thaps3 chr4 ensembl transcript 142156 143207 . + . ID=Thaps268592;Parent=Thaps268592;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 142156 142931 . + 0 ID=Thaps268592;Parent=Thaps268592;rank=1 chr4 . exon 142156 142931 . + . ID=Thaps268592.1;Parent=Thaps268592;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 143069 143207 . + 0 ID=Thaps268592;Parent=Thaps268592;rank=2 chr4 . exon 143069 143207 . + . ID=Thaps268592.2;Parent=Thaps268592;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 145704 147819 . - . ID=Thaps268593;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0W9];external_name=Thaps268593;logic_name=jgi_thaps3 chr4 ensembl transcript 145704 147819 . - . ID=Thaps268593;Parent=Thaps268593;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 145704 145820 . - 0 ID=Thaps268593;Parent=Thaps268593;rank=4 chr4 . exon 145704 145820 . - . ID=Thaps268593.4;Parent=Thaps268593;constitutive=1;rank=4 chr4 . CDS 145895 146532 . - 0 ID=Thaps268593;Parent=Thaps268593;rank=3 chr4 . exon 145895 146532 . - . ID=Thaps268593.3;Parent=Thaps268593;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 146624 147674 . - 0 ID=Thaps268593;Parent=Thaps268593;rank=2 chr4 . exon 146624 147674 . - . ID=Thaps268593.2;Parent=Thaps268593;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 147748 147819 . - 0 ID=Thaps268593;Parent=Thaps268593;rank=1 chr4 . exon 147748 147819 . - . ID=Thaps268593.1;Parent=Thaps268593;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 143429 144529 . + . ID=Thaps4091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0W8];external_name=Thaps4091;logic_name=jgi_thaps3 chr4 ensembl transcript 143429 144529 . + . ID=Thaps4091;Parent=Thaps4091;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 143429 144529 . + 0 ID=Thaps4091;Parent=Thaps4091;rank=1 chr4 . exon 143429 144529 . + . ID=Thaps4091.1;Parent=Thaps4091;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 155206 156720 . - . ID=Thaps22079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0X1];external_name=Thaps22079;logic_name=jgi_thaps3 chr4 ensembl transcript 155206 156720 . - . ID=Thaps22079;Parent=Thaps22079;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 155206 155975 . - 0 ID=Thaps22079;Parent=Thaps22079;rank=2 chr4 . exon 155206 155975 . - . ID=Thaps22079.2;Parent=Thaps22079;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 156072 156720 . - 0 ID=Thaps22079;Parent=Thaps22079;rank=1 chr4 . exon 156072 156720 . - . ID=Thaps22079.1;Parent=Thaps22079;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 151938 153804 . - . ID=Thaps268594;biotype=protein_coding;description=Tyrosine aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C0X0];external_name=Thaps268594;logic_name=jgi_thaps3 chr4 ensembl transcript 151938 153804 . - . ID=Thaps268594;Parent=Thaps268594;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 151938 152488 . - 0 ID=Thaps268594;Parent=Thaps268594;rank=3 chr4 . exon 151938 152488 . - . ID=Thaps268594.3;Parent=Thaps268594;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 152563 153262 . - 0 ID=Thaps268594;Parent=Thaps268594;rank=2 chr4 . exon 152563 153262 . - . ID=Thaps268594.2;Parent=Thaps268594;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 153370 153804 . - 0 ID=Thaps268594;Parent=Thaps268594;rank=1 chr4 . exon 153370 153804 . - . ID=Thaps268594.1;Parent=Thaps268594;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 157702 160981 . + . ID=Thaps4095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0X2];external_name=Thaps4095;logic_name=jgi_thaps3 chr4 ensembl transcript 157702 160981 . + . ID=Thaps4095;Parent=Thaps4095;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 157702 158370 . + 0 ID=Thaps4095;Parent=Thaps4095;rank=1 chr4 . exon 157702 158370 . + . ID=Thaps4095.1;Parent=Thaps4095;constitutive=1;rank=1 chr4 . CDS 158472 159752 . + 0 ID=Thaps4095;Parent=Thaps4095;rank=2 chr4 . exon 158472 159752 . + . ID=Thaps4095.2;Parent=Thaps4095;constitutive=1;rank=2 chr4 . CDS 159820 160272 . + 0 ID=Thaps4095;Parent=Thaps4095;rank=3 chr4 . CDS 160367 160981 . + 0 ID=Thaps4095;Parent=Thaps4095;rank=4 chr4 . repeat_region 166395 166413 . ? . description=dust chr4 ensembl protein_coding_gene 162904 164233 . + . ID=Thaps262016;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C0X4];external_name=Thaps262016;logic_name=jgi_thaps3 chr4 ensembl transcript 162904 164233 . + . ID=Thaps262016;Parent=Thaps262016;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 162904 163040 . + 0 ID=Thaps262016;Parent=Thaps262016;rank=1 chr4 . exon 162904 163040 . + . ID=Thaps262016.1;Parent=Thaps262016;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 163098 163450 . + 0 ID=Thaps262016;Parent=Thaps262016;rank=2 chr4 . exon 163098 163450 . + . ID=Thaps262016.2;Parent=Thaps262016;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 163505 163763 . + 0 ID=Thaps262016;Parent=Thaps262016;rank=3 chr4 . exon 163505 163763 . + . ID=Thaps262016.3;Parent=Thaps262016;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 163830 164233 . + 0 ID=Thaps262016;Parent=Thaps262016;rank=4 chr4 . exon 163830 164233 . + . ID=Thaps262016.4;Parent=Thaps262016;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 168073 168881 . + . ID=Thaps262018;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0X6];external_name=Thaps262018;logic_name=jgi_thaps3 chr4 ensembl transcript 168073 168881 . + . ID=Thaps262018;Parent=Thaps262018;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 168073 168265 . + 0 ID=Thaps262018;Parent=Thaps262018;rank=1 chr4 . exon 168073 168265 . + . ID=Thaps262018.1;Parent=Thaps262018;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 168338 168881 . + 0 ID=Thaps262018;Parent=Thaps262018;rank=2 chr4 . exon 168338 168881 . + . ID=Thaps262018.2;Parent=Thaps262018;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 164328 165455 . - . ID=Thaps268596;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0X5];external_name=Thaps268596;logic_name=jgi_thaps3 chr4 ensembl transcript 164328 165455 . - . ID=Thaps268596;Parent=Thaps268596;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 164328 165063 . - 0 ID=Thaps268596;Parent=Thaps268596;rank=3 chr4 . exon 164328 165063 . - . ID=Thaps268596.3;Parent=Thaps268596;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 165118 165292 . - 0 ID=Thaps268596;Parent=Thaps268596;rank=2 chr4 . exon 165118 165292 . - . ID=Thaps268596.2;Parent=Thaps268596;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 165437 165455 . - 0 ID=Thaps268596;Parent=Thaps268596;rank=1 chr4 . exon 165437 165455 . - . ID=Thaps268596.1;Parent=Thaps268596;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 159820 160272 . + . ID=Thaps4095.3;Parent=Thaps4095;constitutive=1;rank=3 chr4 . exon 160367 160981 . + . ID=Thaps4095.4;Parent=Thaps4095;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 161077 162078 . - . ID=Thaps4096;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0X3];external_name=Thaps4096;logic_name=jgi_thaps3 chr4 ensembl transcript 161077 162078 . - . ID=Thaps4096;Parent=Thaps4096;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 161077 162078 . - 0 ID=Thaps4096;Parent=Thaps4096;rank=1 chr4 . exon 161077 162078 . - . ID=Thaps4096.1;Parent=Thaps4096;constitutive=1;rank=1 chr4 . repeat_region 177268 177295 . ? . description=trf chr4 ensembl protein_coding_gene 177583 178626 . - . ID=Thaps13794;biotype=protein_coding;description=Pre-mrna splicing factor splicing factor hprp17-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0X9];external_name=Thaps13794;logic_name=jgi_thaps3 chr4 ensembl transcript 177583 178626 . - . ID=Thaps13794;Parent=Thaps13794;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 177583 178626 . - 0 ID=Thaps13794;Parent=Thaps13794;rank=1 chr4 . exon 177583 178626 . - . ID=Thaps13794.1;Parent=Thaps13794;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 175996 177309 . + . ID=Thaps268598;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0X8];external_name=Thaps268598;logic_name=jgi_thaps3 chr4 ensembl transcript 175996 177309 . + . ID=Thaps268598;Parent=Thaps268598;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 175996 176790 . + 0 ID=Thaps268598;Parent=Thaps268598;rank=1 chr4 . exon 175996 176790 . + . ID=Thaps268598.1;Parent=Thaps268598;constitutive=1;rank=1 chr4 . CDS 176866 177309 . + 0 ID=Thaps268598;Parent=Thaps268598;rank=2 chr4 . exon 176866 177309 . + . ID=Thaps268598.2;Parent=Thaps268598;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 172571 174411 . + . ID=Thaps4100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0X7];external_name=Thaps4100;logic_name=jgi_thaps3 chr4 ensembl transcript 172571 174411 . + . ID=Thaps4100;Parent=Thaps4100;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 172571 174000 . + 0 ID=Thaps4100;Parent=Thaps4100;rank=1 chr4 . exon 172571 174000 . + . ID=Thaps4100.1;Parent=Thaps4100;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 174201 174411 . + 0 ID=Thaps4100;Parent=Thaps4100;rank=2 chr4 . exon 174201 174411 . + . ID=Thaps4100.2;Parent=Thaps4100;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . repeat_region 182158 182201 . ? . description=dust chr4 . repeat_region 182295 182306 . ? . description=dust chr4 . repeat_region 183555 183607 . ? . description=dust chr4 . repeat_region 186552 186581 . ? . description=dust chr4 . repeat_region 187123 187163 . ? . description=dust chr4 ensembl protein_coding_gene 188026 191075 . - . ID=Thaps13335;biotype=protein_coding;description=U5 small nuclear ribonucleoprotein%2C RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y3];external_name=Thaps13335;logic_name=jgi_thaps3 chr4 ensembl transcript 188026 191075 . - . ID=Thaps13335;Parent=Thaps13335;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 188026 189389 . - 0 ID=Thaps13335;Parent=Thaps13335;rank=2 chr4 . exon 188026 189389 . - . ID=Thaps13335.2;Parent=Thaps13335;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 190937 191075 . - 0 ID=Thaps13335;Parent=Thaps13335;rank=1 chr4 ensembl protein_coding_gene 179827 181146 . + . ID=Thaps33348;biotype=protein_coding;description=Imidazoleglycerol-phosphate dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y0];external_name=Thaps33348;logic_name=jgi_thaps3 chr4 ensembl transcript 179827 181146 . + . ID=Thaps33348;Parent=Thaps33348;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 179827 179895 . + 0 ID=Thaps33348;Parent=Thaps33348;rank=1 chr4 . exon 179827 179895 . + . ID=Thaps33348.1;Parent=Thaps33348;constitutive=1;rank=1 chr4 . CDS 180691 181146 . + 0 ID=Thaps33348;Parent=Thaps33348;rank=2 chr4 . exon 180691 181146 . + . ID=Thaps33348.2;Parent=Thaps33348;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 182289 184968 . + . ID=Thaps4104;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y1];external_name=Thaps4104;logic_name=jgi_thaps3 chr4 ensembl transcript 182289 184968 . + . ID=Thaps4104;Parent=Thaps4104;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 182289 182456 . + 0 ID=Thaps4104;Parent=Thaps4104;rank=1 chr4 . exon 182289 182456 . + . ID=Thaps4104.1;Parent=Thaps4104;constitutive=1;rank=1 chr4 . CDS 182570 183033 . + 0 ID=Thaps4104;Parent=Thaps4104;rank=2 chr4 . exon 182570 183033 . + . ID=Thaps4104.2;Parent=Thaps4104;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 183148 183518 . + 0 ID=Thaps4104;Parent=Thaps4104;rank=3 chr4 . exon 183148 183518 . + . ID=Thaps4104.3;Parent=Thaps4104;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 183674 184968 . + 0 ID=Thaps4104;Parent=Thaps4104;rank=4 chr4 . exon 183674 184968 . + . ID=Thaps4104.4;Parent=Thaps4104;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 185757 187888 . + . ID=Thaps4105;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y2];external_name=Thaps4105;logic_name=jgi_thaps3 chr4 ensembl transcript 185757 187888 . + . ID=Thaps4105;Parent=Thaps4105;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 185757 186408 . + 0 ID=Thaps4105;Parent=Thaps4105;rank=1 chr4 . exon 185757 186408 . + . ID=Thaps4105.1;Parent=Thaps4105;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 186611 187888 . + 0 ID=Thaps4105;Parent=Thaps4105;rank=2 chr4 . exon 186611 187888 . + . ID=Thaps4105.2;Parent=Thaps4105;constitutive=1;rank=2 chr4 . repeat_region 192456 193249 . ? . description=trf chr4 . repeat_region 194197 194607 . ? . description=trf chr4 . repeat_region 196138 196169 . ? . description=trf chr4 . exon 190937 191075 . - . ID=Thaps13335.1;Parent=Thaps13335;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 197112 199396 . - . ID=Thaps22087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y5];external_name=Thaps22087;logic_name=jgi_thaps3 chr4 ensembl transcript 197112 199396 . - . ID=Thaps22087;Parent=Thaps22087;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 197112 197519 . - 0 ID=Thaps22087;Parent=Thaps22087;rank=3 chr4 . exon 197112 197519 . - . ID=Thaps22087.3;Parent=Thaps22087;constitutive=1;rank=3 chr4 . CDS 197593 198463 . - 0 ID=Thaps22087;Parent=Thaps22087;rank=2 chr4 . exon 197593 198463 . - . ID=Thaps22087.2;Parent=Thaps22087;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 198552 199396 . - 0 ID=Thaps22087;Parent=Thaps22087;rank=1 chr4 . exon 198552 199396 . - . ID=Thaps22087.1;Parent=Thaps22087;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 191443 193806 . + . ID=Thaps4108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y4];external_name=Thaps4108;logic_name=jgi_thaps3 chr4 ensembl transcript 191443 193806 . + . ID=Thaps4108;Parent=Thaps4108;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 191443 193806 . + 0 ID=Thaps4108;Parent=Thaps4108;rank=1 chr4 . exon 191443 193806 . + . ID=Thaps4108.1;Parent=Thaps4108;constitutive=1;rank=1 chr4 . repeat_region 205811 205819 . ? . description=dust chr4 . repeat_region 207602 207630 . ? . description=dust chr4 ensembl protein_coding_gene 202181 203200 . - . ID=Thaps262025;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y6];external_name=Thaps262025;logic_name=jgi_thaps3 chr4 ensembl transcript 202181 203200 . - . ID=Thaps262025;Parent=Thaps262025;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 202181 202262 . - 0 ID=Thaps262025;Parent=Thaps262025;rank=6 chr4 . exon 202181 202262 . - . ID=Thaps262025.6;Parent=Thaps262025;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 202341 202484 . - 0 ID=Thaps262025;Parent=Thaps262025;rank=5 chr4 . exon 202341 202484 . - . ID=Thaps262025.5;Parent=Thaps262025;constitutive=1;rank=5 chr4 . CDS 202568 202640 . - 0 ID=Thaps262025;Parent=Thaps262025;rank=4 chr4 . exon 202568 202640 . - . ID=Thaps262025.4;Parent=Thaps262025;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 202727 202812 . - 0 ID=Thaps262025;Parent=Thaps262025;rank=3 chr4 . exon 202727 202812 . - . ID=Thaps262025.3;Parent=Thaps262025;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 202946 202981 . - 0 ID=Thaps262025;Parent=Thaps262025;rank=2 chr4 . exon 202946 202981 . - . ID=Thaps262025.2;Parent=Thaps262025;constitutive=1;rank=2 chr4 . CDS 203070 203200 . - 0 ID=Thaps262025;Parent=Thaps262025;rank=1 chr4 . exon 203070 203200 . - . ID=Thaps262025.1;Parent=Thaps262025;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 205891 207159 . + . ID=Thaps268601;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y7];external_name=Thaps268601;logic_name=jgi_thaps3 chr4 ensembl transcript 205891 207159 . + . ID=Thaps268601;Parent=Thaps268601;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 205891 207159 . + 0 ID=Thaps268601;Parent=Thaps268601;rank=1 chr4 . exon 205891 207159 . + . ID=Thaps268601.1;Parent=Thaps268601;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 208817 210899 . - . ID=Thaps33970;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y9];external_name=Thaps33970;logic_name=jgi_thaps3 chr4 ensembl transcript 208817 210899 . - . ID=Thaps33970;Parent=Thaps33970;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 208817 209111 . - 0 ID=Thaps33970;Parent=Thaps33970;rank=4 chr4 . exon 208817 209111 . - . ID=Thaps33970.4;Parent=Thaps33970;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 209193 210019 . - 0 ID=Thaps33970;Parent=Thaps33970;rank=3 chr4 . exon 209193 210019 . - . ID=Thaps33970.3;Parent=Thaps33970;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 210105 210334 . - 0 ID=Thaps33970;Parent=Thaps33970;rank=2 chr4 . CDS 210377 210899 . - 0 ID=Thaps33970;Parent=Thaps33970;rank=1 chr4 ensembl protein_coding_gene 207951 208416 . + . ID=Thaps4111;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Y8];external_name=Thaps4111;logic_name=jgi_thaps3 chr4 ensembl transcript 207951 208416 . + . ID=Thaps4111;Parent=Thaps4111;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 207951 208416 . + 0 ID=Thaps4111;Parent=Thaps4111;rank=1 chr4 . exon 207951 208416 . + . ID=Thaps4111.1;Parent=Thaps4111;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 216579 216608 . ? . description=trf chr4 ensembl protein_coding_gene 212020 212295 . - . ID=Thaps262028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z0];external_name=Thaps262028;logic_name=jgi_thaps3 chr4 ensembl transcript 212020 212295 . - . ID=Thaps262028;Parent=Thaps262028;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 212020 212295 . - 0 ID=Thaps262028;Parent=Thaps262028;rank=1 chr4 . exon 212020 212295 . - . ID=Thaps262028.1;Parent=Thaps262028;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 212292 212479 . - . ID=Thaps262029;biotype=protein_coding;description=Acyl-coa binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z1];external_name=ACBP1;logic_name=jgi_thaps3 chr4 ensembl transcript 212292 212479 . - . ID=Thaps262029;Parent=Thaps262029;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 212292 212479 . - 0 ID=Thaps262029;Parent=Thaps262029;rank=1 chr4 . exon 212292 212479 . - . ID=Thaps262029.1;Parent=Thaps262029;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . exon 210105 210334 . - . ID=Thaps33970.2;Parent=Thaps33970;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . exon 210377 210899 . - . ID=Thaps33970.1;Parent=Thaps33970;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 213191 213859 . + . ID=Thaps4114;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z2];external_name=Thaps4114;logic_name=jgi_thaps3 chr4 ensembl transcript 213191 213859 . + . ID=Thaps4114;Parent=Thaps4114;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 213191 213859 . + 0 ID=Thaps4114;Parent=Thaps4114;rank=1 chr4 . exon 213191 213859 . + . ID=Thaps4114.1;Parent=Thaps4114;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 215029 216279 . - . ID=Thaps4115;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z3];external_name=Thaps4115;logic_name=jgi_thaps3 chr4 ensembl transcript 215029 216279 . - . ID=Thaps4115;Parent=Thaps4115;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 215029 216279 . - 0 ID=Thaps4115;Parent=Thaps4115;rank=1 chr4 . exon 215029 216279 . - . ID=Thaps4115.1;Parent=Thaps4115;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 216924 218318 . + . ID=Thaps4116;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z4];external_name=Thaps4116;logic_name=jgi_thaps3 chr4 ensembl transcript 216924 218318 . + . ID=Thaps4116;Parent=Thaps4116;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 216924 218318 . + 0 ID=Thaps4116;Parent=Thaps4116;rank=1 chr4 . exon 216924 218318 . + . ID=Thaps4116.1;Parent=Thaps4116;constitutive=1;rank=1 chr4 . repeat_region 224858 224865 . ? . description=dust chr4 ensembl protein_coding_gene 227245 228639 . + . ID=Thaps262031;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z6];external_name=Thaps262031;logic_name=jgi_thaps3 chr4 ensembl transcript 227245 228639 . + . ID=Thaps262031;Parent=Thaps262031;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 227245 227519 . + 0 ID=Thaps262031;Parent=Thaps262031;rank=1 chr4 . exon 227245 227519 . + . ID=Thaps262031.1;Parent=Thaps262031;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 227613 227687 . + 0 ID=Thaps262031;Parent=Thaps262031;rank=2 chr4 . exon 227613 227687 . + . ID=Thaps262031.2;Parent=Thaps262031;constitutive=1;rank=2 chr4 . CDS 227712 227860 . + 0 ID=Thaps262031;Parent=Thaps262031;rank=3 chr4 . exon 227712 227860 . + . ID=Thaps262031.3;Parent=Thaps262031;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 227947 228319 . + 0 ID=Thaps262031;Parent=Thaps262031;rank=4 chr4 . exon 227947 228319 . + . ID=Thaps262031.4;Parent=Thaps262031;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 228392 228639 . + 0 ID=Thaps262031;Parent=Thaps262031;rank=5 chr4 . exon 228392 228639 . + . ID=Thaps262031.5;Parent=Thaps262031;constitutive=1;ensembl_end_phase=2;rank=5 chr4 ensembl protein_coding_gene 220002 220538 . - . ID=Thaps4117;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z5];external_name=Thaps4117;logic_name=jgi_thaps3 chr4 ensembl transcript 220002 220538 . - . ID=Thaps4117;Parent=Thaps4117;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 220002 220538 . - 0 ID=Thaps4117;Parent=Thaps4117;rank=1 chr4 . exon 220002 220538 . - . ID=Thaps4117.1;Parent=Thaps4117;constitutive=1;rank=1 chr4 . repeat_region 232262 232297 . ? . description=trf chr4 . repeat_region 232493 232546 . ? . description=trf chr4 . repeat_region 232965 233009 . ? . description=trf chr4 . repeat_region 232967 233005 . ? . description=trf chr4 . repeat_region 233382 233410 . ? . description=trf chr4 ensembl protein_coding_gene 234271 237414 . + . ID=Thaps22092;biotype=protein_coding;description=Coatomer protein subunit beta2 [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z9];external_name=COP3;logic_name=jgi_thaps3 chr4 ensembl transcript 234271 237414 . + . ID=Thaps22092;Parent=Thaps22092;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 234271 237414 . + 0 ID=Thaps22092;Parent=Thaps22092;rank=1 chr4 . exon 234271 237414 . + . ID=Thaps22092.1;Parent=Thaps22092;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 231226 232944 . + . ID=Thaps262032;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z7];external_name=Thaps262032;logic_name=jgi_thaps3 chr4 ensembl transcript 231226 232944 . + . ID=Thaps262032;Parent=Thaps262032;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 231226 231493 . + 0 ID=Thaps262032;Parent=Thaps262032;rank=1 chr4 . exon 231226 231493 . + . ID=Thaps262032.1;Parent=Thaps262032;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 231616 231870 . + 0 ID=Thaps262032;Parent=Thaps262032;rank=2 chr4 . exon 231616 231870 . + . ID=Thaps262032.2;Parent=Thaps262032;constitutive=1;rank=2 chr4 . CDS 231965 232051 . + 0 ID=Thaps262032;Parent=Thaps262032;rank=3 chr4 . exon 231965 232051 . + . ID=Thaps262032.3;Parent=Thaps262032;constitutive=1;rank=3 chr4 . CDS 232224 232714 . + 0 ID=Thaps262032;Parent=Thaps262032;rank=4 chr4 . exon 232224 232714 . + . ID=Thaps262032.4;Parent=Thaps262032;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 232806 232944 . + 0 ID=Thaps262032;Parent=Thaps262032;rank=5 chr4 . exon 232806 232944 . + . ID=Thaps262032.5;Parent=Thaps262032;constitutive=1;ensembl_end_phase=1;rank=5 chr4 ensembl protein_coding_gene 237628 239124 . - . ID=Thaps262034;biotype=protein_coding;description=Allantoicase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C100];external_name=Thaps262034;logic_name=jgi_thaps3 chr4 ensembl transcript 237628 239124 . - . ID=Thaps262034;Parent=Thaps262034;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 237628 238052 . - 0 ID=Thaps262034;Parent=Thaps262034;rank=4 chr4 . exon 237628 238052 . - . ID=Thaps262034.4;Parent=Thaps262034;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 238132 238351 . - 0 ID=Thaps262034;Parent=Thaps262034;rank=3 chr4 . exon 238132 238351 . - . ID=Thaps262034.3;Parent=Thaps262034;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 238427 238595 . - 0 ID=Thaps262034;Parent=Thaps262034;rank=2 chr4 . exon 238427 238595 . - . ID=Thaps262034.2;Parent=Thaps262034;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 238695 239124 . - 0 ID=Thaps262034;Parent=Thaps262034;rank=1 chr4 . exon 238695 239124 . - . ID=Thaps262034.1;Parent=Thaps262034;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 233297 234073 . - . ID=Thaps4121;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Z8];external_name=Thaps4121;logic_name=jgi_thaps3 chr4 ensembl transcript 233297 234073 . - . ID=Thaps4121;Parent=Thaps4121;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 233297 234073 . - 0 ID=Thaps4121;Parent=Thaps4121;rank=1 chr4 . exon 233297 234073 . - . ID=Thaps4121.1;Parent=Thaps4121;constitutive=1;rank=1 chr4 . repeat_region 243855 243862 . ? . description=dust chr4 . repeat_region 248266 248299 . ? . description=dust chr4 ensembl protein_coding_gene 244488 246059 . - . ID=Thaps268606;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C101];external_name=Thaps268606;logic_name=jgi_thaps3 chr4 ensembl transcript 244488 246059 . - . ID=Thaps268606;Parent=Thaps268606;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 244488 245049 . - 0 ID=Thaps268606;Parent=Thaps268606;rank=2 chr4 . exon 244488 245049 . - . ID=Thaps268606.2;Parent=Thaps268606;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 245140 246059 . - 0 ID=Thaps268606;Parent=Thaps268606;rank=1 chr4 . exon 245140 246059 . - . ID=Thaps268606.1;Parent=Thaps268606;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 248493 249884 . + . ID=Thaps4126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C102];external_name=Thaps4126;logic_name=jgi_thaps3 chr4 ensembl transcript 248493 249884 . + . ID=Thaps4126;Parent=Thaps4126;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 248493 249884 . + 0 ID=Thaps4126;Parent=Thaps4126;rank=1 chr4 . exon 248493 249884 . + . ID=Thaps4126.1;Parent=Thaps4126;constitutive=1;rank=1 chr4 . repeat_region 252625 252711 . ? . description=trf chr4 ensembl tRNA_gene 252716 252787 . - . ID=EPrTPOG00000000107;biotype=tRNA;description=tRNA-Pro for anticodon AGG [Source:TRNASCAN_SE%3BAcc:tRNA-Pro];external_name=tRNA-Pro;logic_name=ncrna_eg chr4 ensembl transcript 252716 252787 . - . ID=EPrTPOT00000000107;Parent=EPrTPOG00000000107;biotype=tRNA;logic_name=ncrna_eg chr4 . exon 252716 252787 . - . ID=EPrTPOE00000000107;Parent=EPrTPOT00000000107;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 254082 258364 . - . ID=Thaps22095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C105];external_name=Thaps22095;logic_name=jgi_thaps3 chr4 ensembl transcript 254082 258364 . - . ID=Thaps22095;Parent=Thaps22095;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 254082 254226 . - 0 ID=Thaps22095;Parent=Thaps22095;rank=5 chr4 . exon 254082 254226 . - . ID=Thaps22095.5;Parent=Thaps22095;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 254310 255531 . - 0 ID=Thaps22095;Parent=Thaps22095;rank=4 chr4 . exon 254310 255531 . - . ID=Thaps22095.4;Parent=Thaps22095;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 255609 255897 . - 0 ID=Thaps22095;Parent=Thaps22095;rank=3 chr4 . exon 255609 255897 . - . ID=Thaps22095.3;Parent=Thaps22095;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 255980 258223 . - 0 ID=Thaps22095;Parent=Thaps22095;rank=2 chr4 . exon 255980 258223 . - . ID=Thaps22095.2;Parent=Thaps22095;constitutive=1;rank=2 chr4 . CDS 258251 258364 . - 0 ID=Thaps22095;Parent=Thaps22095;rank=1 chr4 . exon 258251 258364 . - . ID=Thaps22095.1;Parent=Thaps22095;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 250516 250770 . + . ID=Thaps33574;biotype=protein_coding;description=Acyl carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8C103];external_name=Thaps33574;logic_name=jgi_thaps3 chr4 ensembl transcript 250516 250770 . + . ID=Thaps33574;Parent=Thaps33574;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 250516 250770 . + 0 ID=Thaps33574;Parent=Thaps33574;rank=1 chr4 . exon 250516 250770 . + . ID=Thaps33574.1;Parent=Thaps33574;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 253349 253919 . + . ID=Thaps33601;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C104];external_name=Thaps33601;logic_name=jgi_thaps3 chr4 ensembl transcript 253349 253919 . + . ID=Thaps33601;Parent=Thaps33601;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 253349 253578 . + 0 ID=Thaps33601;Parent=Thaps33601;rank=1 chr4 . exon 253349 253578 . + . ID=Thaps33601.1;Parent=Thaps33601;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 253688 253919 . + 0 ID=Thaps33601;Parent=Thaps33601;rank=2 chr4 . exon 253688 253919 . + . ID=Thaps33601.2;Parent=Thaps33601;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 262830 264343 . - . ID=Thaps22096;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C108];external_name=Thaps22096;logic_name=jgi_thaps3 chr4 ensembl transcript 262830 264343 . - . ID=Thaps22096;Parent=Thaps22096;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 262830 263807 . - 0 ID=Thaps22096;Parent=Thaps22096;rank=2 chr4 . exon 262830 263807 . - . ID=Thaps22096.2;Parent=Thaps22096;constitutive=1;rank=2 chr4 . CDS 263939 264343 . - 0 ID=Thaps22096;Parent=Thaps22096;rank=1 chr4 . exon 263939 264343 . - . ID=Thaps22096.1;Parent=Thaps22096;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 264655 266265 . + . ID=Thaps22097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C109];external_name=Thaps22097;logic_name=jgi_thaps3 chr4 ensembl transcript 264655 266265 . + . ID=Thaps22097;Parent=Thaps22097;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 264655 266265 . + 0 ID=Thaps22097;Parent=Thaps22097;rank=1 chr4 . exon 264655 266265 . + . ID=Thaps22097.1;Parent=Thaps22097;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 268258 269724 . + . ID=Thaps262041;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C110];external_name=Thaps262041;logic_name=jgi_thaps3 chr4 ensembl transcript 268258 269724 . + . ID=Thaps262041;Parent=Thaps262041;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 268258 268729 . + 0 ID=Thaps262041;Parent=Thaps262041;rank=1 chr4 . exon 268258 268729 . + . ID=Thaps262041.1;Parent=Thaps262041;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 268805 269125 . + 0 ID=Thaps262041;Parent=Thaps262041;rank=2 chr4 . exon 268805 269125 . + . ID=Thaps262041.2;Parent=Thaps262041;constitutive=1;rank=2 chr4 . CDS 269220 269724 . + 0 ID=Thaps262041;Parent=Thaps262041;rank=3 chr4 ensembl protein_coding_gene 259974 260291 . - . ID=Thaps4130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C106];external_name=Thaps4130;logic_name=jgi_thaps3 chr4 ensembl transcript 259974 260291 . - . ID=Thaps4130;Parent=Thaps4130;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 259974 260291 . - 0 ID=Thaps4130;Parent=Thaps4130;rank=1 chr4 . exon 259974 260291 . - . ID=Thaps4130.1;Parent=Thaps4130;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 261679 262653 . + . ID=Thaps4131;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C107];external_name=Thaps4131;logic_name=jgi_thaps3 chr4 ensembl transcript 261679 262653 . + . ID=Thaps4131;Parent=Thaps4131;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 261679 262653 . + 0 ID=Thaps4131;Parent=Thaps4131;rank=1 chr4 . exon 261679 262653 . + . ID=Thaps4131.1;Parent=Thaps4131;constitutive=1;rank=1 chr4 . repeat_region 271820 271859 . ? . description=trf chr4 ensembl protein_coding_gene 271046 272089 . + . ID=Thaps22099;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C111];external_name=Thaps22099;logic_name=jgi_thaps3 chr4 ensembl transcript 271046 272089 . + . ID=Thaps22099;Parent=Thaps22099;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 271046 272089 . + 0 ID=Thaps22099;Parent=Thaps22099;rank=1 chr4 . exon 271046 272089 . + . ID=Thaps22099.1;Parent=Thaps22099;constitutive=1;rank=1 chr4 . exon 269220 269724 . + . ID=Thaps262041.3;Parent=Thaps262041;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 273127 274373 . - . ID=Thaps33316;biotype=protein_coding;description=Dtdp-glucose 4%2C6-dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8C113];external_name=DGD1;logic_name=jgi_thaps3 chr4 ensembl transcript 273127 274373 . - . ID=Thaps33316;Parent=Thaps33316;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 273127 273687 . - 0 ID=Thaps33316;Parent=Thaps33316;rank=4 chr4 . exon 273127 273687 . - . ID=Thaps33316.4;Parent=Thaps33316;constitutive=1;rank=4 chr4 . CDS 273771 273820 . - 0 ID=Thaps33316;Parent=Thaps33316;rank=3 chr4 . exon 273771 273820 . - . ID=Thaps33316.3;Parent=Thaps33316;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 273923 274183 . - 0 ID=Thaps33316;Parent=Thaps33316;rank=2 chr4 . exon 273923 274183 . - . ID=Thaps33316.2;Parent=Thaps33316;constitutive=1;rank=2 chr4 . CDS 274304 274373 . - 0 ID=Thaps33316;Parent=Thaps33316;rank=1 chr4 . exon 274304 274373 . - . ID=Thaps33316.1;Parent=Thaps33316;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 278771 279823 . - . ID=Thaps33777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C115];external_name=Thaps33777;logic_name=jgi_thaps3 chr4 ensembl transcript 278771 279823 . - . ID=Thaps33777;Parent=Thaps33777;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 278771 279123 . - 0 ID=Thaps33777;Parent=Thaps33777;rank=4 chr4 . exon 278771 279123 . - . ID=Thaps33777.4;Parent=Thaps33777;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 279163 279226 . - 0 ID=Thaps33777;Parent=Thaps33777;rank=3 chr4 . CDS 279310 279585 . - 0 ID=Thaps33777;Parent=Thaps33777;rank=2 chr4 . CDS 279677 279823 . - 0 ID=Thaps33777;Parent=Thaps33777;rank=1 chr4 ensembl protein_coding_gene 272342 272785 . - . ID=Thaps4136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C112];external_name=Thaps4136;logic_name=jgi_thaps3 chr4 ensembl transcript 272342 272785 . - . ID=Thaps4136;Parent=Thaps4136;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 272342 272785 . - 0 ID=Thaps4136;Parent=Thaps4136;rank=1 chr4 . exon 272342 272785 . - . ID=Thaps4136.1;Parent=Thaps4136;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 275408 276610 . + . ID=Thaps4138;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C114];external_name=Thaps4138;logic_name=jgi_thaps3 chr4 ensembl transcript 275408 276610 . + . ID=Thaps4138;Parent=Thaps4138;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 275408 276610 . + 0 ID=Thaps4138;Parent=Thaps4138;rank=1 chr4 . exon 275408 276610 . + . ID=Thaps4138.1;Parent=Thaps4138;constitutive=1;rank=1 chr4 . repeat_region 284729 284769 . ? . description=dust chr4 ensembl protein_coding_gene 288721 289251 . - . ID=Thaps262046;biotype=protein_coding;description=Magnesium transporter protein [Source:UniProtKB/TrEMBL%3BAcc:B8C119];external_name=MGT1;logic_name=jgi_thaps3 chr4 ensembl transcript 288721 289251 . - . ID=Thaps262046;Parent=Thaps262046;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 288721 289251 . - 0 ID=Thaps262046;Parent=Thaps262046;rank=1 chr4 . exon 288721 289251 . - . ID=Thaps262046.1;Parent=Thaps262046;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 281824 283908 . - . ID=Thaps268610;biotype=protein_coding;description=Membrane spanning protein of the nonaspanin family [Source:UniProtKB/TrEMBL%3BAcc:B8C116];external_name=Thaps268610;logic_name=jgi_thaps3 chr4 ensembl transcript 281824 283908 . - . ID=Thaps268610;Parent=Thaps268610;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 281824 283706 . - 0 ID=Thaps268610;Parent=Thaps268610;rank=2 chr4 . exon 281824 283706 . - . ID=Thaps268610.2;Parent=Thaps268610;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 283833 283908 . - 0 ID=Thaps268610;Parent=Thaps268610;rank=1 chr4 . exon 283833 283908 . - . ID=Thaps268610.1;Parent=Thaps268610;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 279163 279226 . - . ID=Thaps33777.3;Parent=Thaps33777;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . exon 279310 279585 . - . ID=Thaps33777.2;Parent=Thaps33777;constitutive=1;rank=2 chr4 . exon 279677 279823 . - . ID=Thaps33777.1;Parent=Thaps33777;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 285267 286715 . + . ID=Thaps4142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C117];external_name=Thaps4142;logic_name=jgi_thaps3 chr4 ensembl transcript 285267 286715 . + . ID=Thaps4142;Parent=Thaps4142;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 285267 286715 . + 0 ID=Thaps4142;Parent=Thaps4142;rank=1 chr4 . exon 285267 286715 . + . ID=Thaps4142.1;Parent=Thaps4142;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 286872 288111 . - . ID=Thaps4143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C118];external_name=Thaps4143;logic_name=jgi_thaps3 chr4 ensembl transcript 286872 288111 . - . ID=Thaps4143;Parent=Thaps4143;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 286872 287816 . - 0 ID=Thaps4143;Parent=Thaps4143;rank=2 chr4 . exon 286872 287816 . - . ID=Thaps4143.2;Parent=Thaps4143;constitutive=1;rank=2 chr4 . CDS 287920 288111 . - 0 ID=Thaps4143;Parent=Thaps4143;rank=1 chr4 . exon 287920 288111 . - . ID=Thaps4143.1;Parent=Thaps4143;constitutive=1;rank=1 chr4 . repeat_region 297696 297717 . ? . description=trf chr4 ensembl protein_coding_gene 290752 294296 . + . ID=Thaps262047;biotype=protein_coding;description=Ubiquitin activating enzyme [Source:UniProtKB/TrEMBL%3BAcc:B8C120];external_name=Thaps262047;logic_name=jgi_thaps3 chr4 ensembl transcript 290752 294296 . + . ID=Thaps262047;Parent=Thaps262047;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 290752 290836 . + 0 ID=Thaps262047;Parent=Thaps262047;rank=1 chr4 . exon 290752 290836 . + . ID=Thaps262047.1;Parent=Thaps262047;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 290987 291201 . + 0 ID=Thaps262047;Parent=Thaps262047;rank=2 chr4 . exon 290987 291201 . + . ID=Thaps262047.2;Parent=Thaps262047;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 291394 291481 . + 0 ID=Thaps262047;Parent=Thaps262047;rank=3 chr4 . exon 291394 291481 . + . ID=Thaps262047.3;Parent=Thaps262047;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 291500 291792 . + 0 ID=Thaps262047;Parent=Thaps262047;rank=4 chr4 . exon 291500 291792 . + . ID=Thaps262047.4;Parent=Thaps262047;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 291847 291965 . + 0 ID=Thaps262047;Parent=Thaps262047;rank=5 chr4 . exon 291847 291965 . + . ID=Thaps262047.5;Parent=Thaps262047;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 292050 293115 . + 0 ID=Thaps262047;Parent=Thaps262047;rank=6 chr4 . exon 292050 293115 . + . ID=Thaps262047.6;Parent=Thaps262047;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 293176 293277 . + 0 ID=Thaps262047;Parent=Thaps262047;rank=7 chr4 . exon 293176 293277 . + . ID=Thaps262047.7;Parent=Thaps262047;constitutive=1;rank=7 chr4 . CDS 293293 293472 . + 0 ID=Thaps262047;Parent=Thaps262047;rank=8 chr4 . exon 293293 293472 . + . ID=Thaps262047.8;Parent=Thaps262047;constitutive=1;rank=8 chr4 . CDS 293515 294296 . + 0 ID=Thaps262047;Parent=Thaps262047;rank=9 chr4 . exon 293515 294296 . + . ID=Thaps262047.9;Parent=Thaps262047;constitutive=1;ensembl_end_phase=2;rank=9 chr4 ensembl protein_coding_gene 297967 299376 . + . ID=Thaps268614;biotype=protein_coding;description=Pseudouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C122];external_name=Thaps268614;logic_name=jgi_thaps3 chr4 ensembl transcript 297967 299376 . + . ID=Thaps268614;Parent=Thaps268614;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 297967 299376 . + 0 ID=Thaps268614;Parent=Thaps268614;rank=1 chr4 . exon 297967 299376 . + . ID=Thaps268614.1;Parent=Thaps268614;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 294676 297526 . - . ID=Thaps4146;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C121];external_name=Thaps4146;logic_name=jgi_thaps3 chr4 ensembl transcript 294676 297526 . - . ID=Thaps4146;Parent=Thaps4146;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 294676 296735 . - 0 ID=Thaps4146;Parent=Thaps4146;rank=2 chr4 . exon 294676 296735 . - . ID=Thaps4146.2;Parent=Thaps4146;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 297073 297526 . - 0 ID=Thaps4146;Parent=Thaps4146;rank=1 chr4 . exon 297073 297526 . - . ID=Thaps4146.1;Parent=Thaps4146;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 306138 310436 . - . ID=Thaps22107;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C125];external_name=Thaps22107;logic_name=jgi_thaps3 chr4 ensembl transcript 306138 310436 . - . ID=Thaps22107;Parent=Thaps22107;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 306138 310436 . - 0 ID=Thaps22107;Parent=Thaps22107;rank=1 chr4 . exon 306138 310436 . - . ID=Thaps22107.1;Parent=Thaps22107;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 303786 306016 . + . ID=Thaps268615;biotype=protein_coding;description=Dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C124];external_name=Thaps268615;logic_name=jgi_thaps3 chr4 ensembl transcript 303786 306016 . + . ID=Thaps268615;Parent=Thaps268615;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 303786 304563 . + 0 ID=Thaps268615;Parent=Thaps268615;rank=1 chr4 . exon 303786 304563 . + . ID=Thaps268615.1;Parent=Thaps268615;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 304960 305111 . + 0 ID=Thaps268615;Parent=Thaps268615;rank=2 chr4 . exon 304960 305111 . + . ID=Thaps268615.2;Parent=Thaps268615;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 305189 306016 . + 0 ID=Thaps268615;Parent=Thaps268615;rank=3 chr4 . exon 305189 306016 . + . ID=Thaps268615.3;Parent=Thaps268615;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 299720 303349 . - . ID=Thaps4147;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C123];external_name=Thaps4147;logic_name=jgi_thaps3 chr4 ensembl transcript 299720 303349 . - . ID=Thaps4147;Parent=Thaps4147;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 299720 303349 . - 0 ID=Thaps4147;Parent=Thaps4147;rank=1 chr4 . exon 299720 303349 . - . ID=Thaps4147.1;Parent=Thaps4147;constitutive=1;rank=1 chr4 . repeat_region 310289 310308 . ? . description=trf chr4 . repeat_region 310289 310308 . ? . description=dust chr4 . repeat_region 311192 311251 . ? . description=trf chr4 . repeat_region 311398 311407 . ? . description=dust chr4 . repeat_region 311441 311455 . ? . description=dust chr4 ensembl protein_coding_gene 311635 315956 . - . ID=Thaps22108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C127];external_name=Thaps22108;logic_name=jgi_thaps3 chr4 ensembl transcript 311635 315956 . - . ID=Thaps22108;Parent=Thaps22108;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 311635 312155 . - 0 ID=Thaps22108;Parent=Thaps22108;rank=3 chr4 . exon 311635 312155 . - . ID=Thaps22108.3;Parent=Thaps22108;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 312255 315895 . - 0 ID=Thaps22108;Parent=Thaps22108;rank=2 chr4 . exon 312255 315895 . - . ID=Thaps22108.2;Parent=Thaps22108;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 315931 315956 . - 0 ID=Thaps22108;Parent=Thaps22108;rank=1 chr4 . exon 315931 315956 . - . ID=Thaps22108.1;Parent=Thaps22108;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 316815 318443 . + . ID=Thaps22109;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C128];external_name=Thaps22109;logic_name=jgi_thaps3 chr4 ensembl transcript 316815 318443 . + . ID=Thaps22109;Parent=Thaps22109;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 316815 317060 . + 0 ID=Thaps22109;Parent=Thaps22109;rank=1 chr4 . exon 316815 317060 . + . ID=Thaps22109.1;Parent=Thaps22109;constitutive=1;rank=1 chr4 . CDS 317197 317217 . + 0 ID=Thaps22109;Parent=Thaps22109;rank=2 chr4 . exon 317197 317217 . + . ID=Thaps22109.2;Parent=Thaps22109;constitutive=1;rank=2 chr4 . CDS 317313 317948 . + 0 ID=Thaps22109;Parent=Thaps22109;rank=3 chr4 . exon 317313 317948 . + . ID=Thaps22109.3;Parent=Thaps22109;constitutive=1;rank=3 chr4 . CDS 318027 318443 . + 0 ID=Thaps22109;Parent=Thaps22109;rank=4 chr4 . exon 318027 318443 . + . ID=Thaps22109.4;Parent=Thaps22109;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 318760 322363 . - . ID=Thaps268616;biotype=protein_coding;description=Exportin1 [Source:UniProtKB/TrEMBL%3BAcc:B8C129];external_name=Thaps268616;logic_name=jgi_thaps3 chr4 ensembl transcript 318760 322363 . - . ID=Thaps268616;Parent=Thaps268616;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 318760 319308 . - 0 ID=Thaps268616;Parent=Thaps268616;rank=4 chr4 . exon 318760 319308 . - . ID=Thaps268616.4;Parent=Thaps268616;constitutive=1;rank=4 chr4 . CDS 319397 319513 . - 0 ID=Thaps268616;Parent=Thaps268616;rank=3 chr4 . CDS 319607 321938 . - 0 ID=Thaps268616;Parent=Thaps268616;rank=2 chr4 . CDS 322107 322363 . - 0 ID=Thaps268616;Parent=Thaps268616;rank=1 chr4 ensembl protein_coding_gene 310660 311337 . + . ID=Thaps4150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C126];external_name=Thaps4150;logic_name=jgi_thaps3 chr4 ensembl transcript 310660 311337 . + . ID=Thaps4150;Parent=Thaps4150;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 310660 311337 . + 0 ID=Thaps4150;Parent=Thaps4150;rank=1 chr4 . exon 310660 311337 . + . ID=Thaps4150.1;Parent=Thaps4150;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 324858 329553 . - . ID=Thaps22112;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C131];external_name=Thaps22112;logic_name=jgi_thaps3 chr4 ensembl transcript 324858 329553 . - . ID=Thaps22112;Parent=Thaps22112;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 324858 327959 . - 0 ID=Thaps22112;Parent=Thaps22112;rank=2 chr4 . exon 324858 327959 . - . ID=Thaps22112.2;Parent=Thaps22112;constitutive=1;rank=2 chr4 . CDS 327979 329553 . - 0 ID=Thaps22112;Parent=Thaps22112;rank=1 chr4 . exon 327979 329553 . - . ID=Thaps22112.1;Parent=Thaps22112;constitutive=1;rank=1 chr4 . exon 319397 319513 . - . ID=Thaps268616.3;Parent=Thaps268616;constitutive=1;rank=3 chr4 . exon 319607 321938 . - . ID=Thaps268616.2;Parent=Thaps268616;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 322107 322363 . - . ID=Thaps268616.1;Parent=Thaps268616;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 323618 324720 . + . ID=Thaps33682;biotype=protein_coding;description=RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8C130];external_name=Thaps33682;logic_name=jgi_thaps3 chr4 ensembl transcript 323618 324720 . + . ID=Thaps33682;Parent=Thaps33682;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 323618 323757 . + 0 ID=Thaps33682;Parent=Thaps33682;rank=1 chr4 . exon 323618 323757 . + . ID=Thaps33682.1;Parent=Thaps33682;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 323853 324355 . + 0 ID=Thaps33682;Parent=Thaps33682;rank=2 chr4 . exon 323853 324355 . + . ID=Thaps33682.2;Parent=Thaps33682;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 324407 324720 . + 0 ID=Thaps33682;Parent=Thaps33682;rank=3 chr4 . exon 324407 324720 . + . ID=Thaps33682.3;Parent=Thaps33682;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . repeat_region 329958 330018 . ? . description=dust chr4 . repeat_region 336962 336984 . ? . description=dust chr4 . repeat_region 338387 338394 . ? . description=dust chr4 ensembl protein_coding_gene 334935 336275 . - . ID=Thaps33851;biotype=protein_coding;description=Transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B8C133];external_name=Thaps33851;logic_name=jgi_thaps3 chr4 ensembl transcript 334935 336275 . - . ID=Thaps33851;Parent=Thaps33851;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 334935 336002 . - 0 ID=Thaps33851;Parent=Thaps33851;rank=2 chr4 . exon 334935 336002 . - . ID=Thaps33851.2;Parent=Thaps33851;constitutive=1;rank=2 chr4 . CDS 336099 336275 . - 0 ID=Thaps33851;Parent=Thaps33851;rank=1 chr4 . exon 336099 336275 . - . ID=Thaps33851.1;Parent=Thaps33851;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 329892 334534 . + . ID=Thaps4157;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C132];external_name=Thaps4157;logic_name=jgi_thaps3 chr4 ensembl transcript 329892 334534 . + . ID=Thaps4157;Parent=Thaps4157;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 329892 330300 . + 0 ID=Thaps4157;Parent=Thaps4157;rank=1 chr4 . exon 329892 330300 . + . ID=Thaps4157.1;Parent=Thaps4157;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 330415 330544 . + 0 ID=Thaps4157;Parent=Thaps4157;rank=2 chr4 . exon 330415 330544 . + . ID=Thaps4157.2;Parent=Thaps4157;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 330864 330898 . + 0 ID=Thaps4157;Parent=Thaps4157;rank=3 chr4 . exon 330864 330898 . + . ID=Thaps4157.3;Parent=Thaps4157;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 330963 331122 . + 0 ID=Thaps4157;Parent=Thaps4157;rank=4 chr4 . exon 330963 331122 . + . ID=Thaps4157.4;Parent=Thaps4157;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 331205 331395 . + 0 ID=Thaps4157;Parent=Thaps4157;rank=5 chr4 . exon 331205 331395 . + . ID=Thaps4157.5;Parent=Thaps4157;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 331622 331908 . + 0 ID=Thaps4157;Parent=Thaps4157;rank=6 chr4 . exon 331622 331908 . + . ID=Thaps4157.6;Parent=Thaps4157;constitutive=1;ensembl_end_phase=2;rank=6 chr4 . CDS 332028 333169 . + 0 ID=Thaps4157;Parent=Thaps4157;rank=7 chr4 . exon 332028 333169 . + . ID=Thaps4157.7;Parent=Thaps4157;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . CDS 333256 334534 . + 0 ID=Thaps4157;Parent=Thaps4157;rank=8 chr4 . exon 333256 334534 . + . ID=Thaps4157.8;Parent=Thaps4157;constitutive=1;ensembl_end_phase=1;rank=8 chr4 ensembl protein_coding_gene 337683 340401 . + . ID=Thaps4159;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C134];external_name=Thaps4159;logic_name=jgi_thaps3 chr4 ensembl transcript 337683 340401 . + . ID=Thaps4159;Parent=Thaps4159;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 337683 337827 . + 0 ID=Thaps4159;Parent=Thaps4159;rank=1 chr4 . exon 337683 337827 . + . ID=Thaps4159.1;Parent=Thaps4159;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 338017 340355 . + 0 ID=Thaps4159;Parent=Thaps4159;rank=2 chr4 . exon 338017 340355 . + . ID=Thaps4159.2;Parent=Thaps4159;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 340390 340401 . + 0 ID=Thaps4159;Parent=Thaps4159;rank=3 chr4 . repeat_region 340419 340493 . + . description=scaffold_16_176_2_467304_468103 chr4 ensembl protein_coding_gene 346286 348763 . + . ID=Thaps22114;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C137];external_name=Thaps22114;logic_name=jgi_thaps3 chr4 ensembl transcript 346286 348763 . + . ID=Thaps22114;Parent=Thaps22114;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 346286 346666 . + 0 ID=Thaps22114;Parent=Thaps22114;rank=1 chr4 . exon 346286 346666 . + . ID=Thaps22114.1;Parent=Thaps22114;constitutive=1;rank=1 chr4 . CDS 346818 347837 . + 0 ID=Thaps22114;Parent=Thaps22114;rank=2 chr4 . exon 346818 347837 . + . ID=Thaps22114.2;Parent=Thaps22114;constitutive=1;rank=2 chr4 . CDS 347969 348763 . + 0 ID=Thaps22114;Parent=Thaps22114;rank=3 chr4 . exon 347969 348763 . + . ID=Thaps22114.3;Parent=Thaps22114;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 344084 345759 . - . ID=Thaps268619;biotype=protein_coding;description=Adp-ribosylation factor-related protein [Source:UniProtKB/TrEMBL%3BAcc:B8C136];external_name=Thaps268619;logic_name=jgi_thaps3 chr4 ensembl transcript 344084 345759 . - . ID=Thaps268619;Parent=Thaps268619;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 344084 344181 . - 0 ID=Thaps268619;Parent=Thaps268619;rank=3 chr4 . exon 344084 344181 . - . ID=Thaps268619.3;Parent=Thaps268619;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 344437 344824 . - 0 ID=Thaps268619;Parent=Thaps268619;rank=2 chr4 . exon 344437 344824 . - . ID=Thaps268619.2;Parent=Thaps268619;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 345646 345759 . - 0 ID=Thaps268619;Parent=Thaps268619;rank=1 chr4 . exon 345646 345759 . - . ID=Thaps268619.1;Parent=Thaps268619;constitutive=1;rank=1 chr4 . exon 340390 340401 . + . ID=Thaps4159.3;Parent=Thaps4159;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 340747 343790 . - . ID=Thaps4160;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C135];external_name=Thaps4160;logic_name=jgi_thaps3 chr4 ensembl transcript 340747 343790 . - . ID=Thaps4160;Parent=Thaps4160;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 340747 341460 . - 0 ID=Thaps4160;Parent=Thaps4160;rank=3 chr4 . exon 340747 341460 . - . ID=Thaps4160.3;Parent=Thaps4160;constitutive=1;rank=3 chr4 . CDS 341549 343398 . - 0 ID=Thaps4160;Parent=Thaps4160;rank=2 chr4 . exon 341549 343398 . - . ID=Thaps4160.2;Parent=Thaps4160;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 343499 343790 . - 0 ID=Thaps4160;Parent=Thaps4160;rank=1 chr4 . exon 343499 343790 . - . ID=Thaps4160.1;Parent=Thaps4160;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 350348 351352 . + . ID=Thaps22115;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C139];external_name=Thaps22115;logic_name=jgi_thaps3 chr4 ensembl transcript 350348 351352 . + . ID=Thaps22115;Parent=Thaps22115;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 350348 351352 . + 0 ID=Thaps22115;Parent=Thaps22115;rank=1 chr4 . exon 350348 351352 . + . ID=Thaps22115.1;Parent=Thaps22115;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 349186 349697 . - . ID=Thaps262056;biotype=protein_coding;description=RS20%2C ribosomal protein 20 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C138];external_name=RS20;logic_name=jgi_thaps3 chr4 ensembl transcript 349186 349697 . - . ID=Thaps262056;Parent=Thaps262056;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 349186 349312 . - 0 ID=Thaps262056;Parent=Thaps262056;rank=2 chr4 . exon 349186 349312 . - . ID=Thaps262056.2;Parent=Thaps262056;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 349452 349697 . - 0 ID=Thaps262056;Parent=Thaps262056;rank=1 chr4 . exon 349452 349697 . - . ID=Thaps262056.1;Parent=Thaps262056;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 353468 354916 . - . ID=Thaps262059;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C141];external_name=Thaps262059;logic_name=jgi_thaps3 chr4 ensembl transcript 353468 354916 . - . ID=Thaps262059;Parent=Thaps262059;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 353468 354345 . - 0 ID=Thaps262059;Parent=Thaps262059;rank=2 chr4 . exon 353468 354345 . - . ID=Thaps262059.2;Parent=Thaps262059;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 354500 354916 . - 0 ID=Thaps262059;Parent=Thaps262059;rank=1 chr4 . exon 354500 354916 . - . ID=Thaps262059.1;Parent=Thaps262059;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 351682 353355 . - . ID=Thaps268621;biotype=protein_coding;description=Phosphoglucomutase [Source:UniProtKB/TrEMBL%3BAcc:B8C140];external_name=PGM2;logic_name=jgi_thaps3 chr4 ensembl transcript 351682 353355 . - . ID=Thaps268621;Parent=Thaps268621;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 351682 353355 . - 0 ID=Thaps268621;Parent=Thaps268621;rank=1 chr4 . exon 351682 353355 . - . ID=Thaps268621.1;Parent=Thaps268621;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 357706 360042 . - . ID=Thaps4166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C142];external_name=Thaps4166;logic_name=jgi_thaps3 chr4 ensembl transcript 357706 360042 . - . ID=Thaps4166;Parent=Thaps4166;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 357706 360042 . - 0 ID=Thaps4166;Parent=Thaps4166;rank=1 chr4 . exon 357706 360042 . - . ID=Thaps4166.1;Parent=Thaps4166;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 365231 366075 . + . ID=Thaps18091;biotype=protein_coding;description=Phospholipase [Source:UniProtKB/TrEMBL%3BAcc:B8C145];external_name=Thaps18091;logic_name=jgi_thaps3 chr4 ensembl transcript 365231 366075 . + . ID=Thaps18091;Parent=Thaps18091;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 365231 365296 . + 0 ID=Thaps18091;Parent=Thaps18091;rank=1 chr4 . exon 365231 365296 . + . ID=Thaps18091.1;Parent=Thaps18091;constitutive=1;rank=1 chr4 . CDS 365434 365479 . + 0 ID=Thaps18091;Parent=Thaps18091;rank=2 chr4 . exon 365434 365479 . + . ID=Thaps18091.2;Parent=Thaps18091;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 365564 366075 . + 0 ID=Thaps18091;Parent=Thaps18091;rank=3 chr4 . exon 365564 366075 . + . ID=Thaps18091.3;Parent=Thaps18091;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 360403 362715 . + . ID=Thaps4167;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C143];external_name=Thaps4167;logic_name=jgi_thaps3 chr4 ensembl transcript 360403 362715 . + . ID=Thaps4167;Parent=Thaps4167;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 360403 362715 . + 0 ID=Thaps4167;Parent=Thaps4167;rank=1 chr4 . exon 360403 362715 . + . ID=Thaps4167.1;Parent=Thaps4167;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 363014 364934 . - . ID=Thaps4168;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C144];external_name=Thaps4168;logic_name=jgi_thaps3 chr4 ensembl transcript 363014 364934 . - . ID=Thaps4168;Parent=Thaps4168;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 363014 363903 . - 0 ID=Thaps4168;Parent=Thaps4168;rank=2 chr4 . exon 363014 363903 . - . ID=Thaps4168.2;Parent=Thaps4168;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 363980 364934 . - 0 ID=Thaps4168;Parent=Thaps4168;rank=1 chr4 . exon 363980 364934 . - . ID=Thaps4168.1;Parent=Thaps4168;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 366437 367580 . - . ID=Thaps4170;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C146];external_name=Thaps4170;logic_name=jgi_thaps3 chr4 ensembl transcript 366437 367580 . - . ID=Thaps4170;Parent=Thaps4170;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 366437 367355 . - 0 ID=Thaps4170;Parent=Thaps4170;rank=2 chr4 . exon 366437 367355 . - . ID=Thaps4170.2;Parent=Thaps4170;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 367483 367580 . - 0 ID=Thaps4170;Parent=Thaps4170;rank=1 chr4 . exon 367483 367580 . - . ID=Thaps4170.1;Parent=Thaps4170;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 368421 370452 . - . ID=Thaps4171;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C147];external_name=Thaps4171;logic_name=jgi_thaps3 chr4 ensembl transcript 368421 370452 . - . ID=Thaps4171;Parent=Thaps4171;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 368421 369608 . - 0 ID=Thaps4171;Parent=Thaps4171;rank=2 chr4 . exon 368421 369608 . - . ID=Thaps4171.2;Parent=Thaps4171;constitutive=1;rank=2 chr4 . CDS 369676 370452 . - 0 ID=Thaps4171;Parent=Thaps4171;rank=1 chr4 . repeat_region 375081 375124 . ? . description=dust chr4 ensembl protein_coding_gene 372261 373249 . - . ID=Thaps22117;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C148];external_name=Thaps22117;logic_name=jgi_thaps3 chr4 ensembl transcript 372261 373249 . - . ID=Thaps22117;Parent=Thaps22117;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 372261 372747 . - 0 ID=Thaps22117;Parent=Thaps22117;rank=2 chr4 . exon 372261 372747 . - . ID=Thaps22117.2;Parent=Thaps22117;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 373140 373249 . - 0 ID=Thaps22117;Parent=Thaps22117;rank=1 chr4 . exon 373140 373249 . - . ID=Thaps22117.1;Parent=Thaps22117;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 373619 374924 . + . ID=Thaps22118;biotype=protein_coding;description=Casein kinase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C149];external_name=Thaps22118;logic_name=jgi_thaps3 chr4 ensembl transcript 373619 374924 . + . ID=Thaps22118;Parent=Thaps22118;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 373619 373636 . + 0 ID=Thaps22118;Parent=Thaps22118;rank=1 chr4 . exon 373619 373636 . + . ID=Thaps22118.1;Parent=Thaps22118;constitutive=1;rank=1 chr4 . CDS 373728 373805 . + 0 ID=Thaps22118;Parent=Thaps22118;rank=2 chr4 . exon 373728 373805 . + . ID=Thaps22118.2;Parent=Thaps22118;constitutive=1;rank=2 chr4 . CDS 374034 374924 . + 0 ID=Thaps22118;Parent=Thaps22118;rank=3 chr4 . exon 374034 374924 . + . ID=Thaps22118.3;Parent=Thaps22118;constitutive=1;rank=3 chr4 . exon 369676 370452 . - . ID=Thaps4171.1;Parent=Thaps4171;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 375503 377257 . + . ID=Thaps4174;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C150];external_name=Thaps4174;logic_name=jgi_thaps3 chr4 ensembl transcript 375503 377257 . + . ID=Thaps4174;Parent=Thaps4174;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 375503 375751 . + 0 ID=Thaps4174;Parent=Thaps4174;rank=1 chr4 . exon 375503 375751 . + . ID=Thaps4174.1;Parent=Thaps4174;constitutive=1;rank=1 chr4 . CDS 375865 377000 . + 0 ID=Thaps4174;Parent=Thaps4174;rank=2 chr4 . exon 375865 377000 . + . ID=Thaps4174.2;Parent=Thaps4174;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 377062 377257 . + 0 ID=Thaps4174;Parent=Thaps4174;rank=3 chr4 . exon 377062 377257 . + . ID=Thaps4174.3;Parent=Thaps4174;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 377294 378476 . - . ID=Thaps4175;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C151];external_name=Thaps4175;logic_name=jgi_thaps3 chr4 ensembl transcript 377294 378476 . - . ID=Thaps4175;Parent=Thaps4175;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 377294 377699 . - 0 ID=Thaps4175;Parent=Thaps4175;rank=4 chr4 . exon 377294 377699 . - . ID=Thaps4175.4;Parent=Thaps4175;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 377776 377902 . - 0 ID=Thaps4175;Parent=Thaps4175;rank=3 chr4 . exon 377776 377902 . - . ID=Thaps4175.3;Parent=Thaps4175;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 377993 378237 . - 0 ID=Thaps4175;Parent=Thaps4175;rank=2 chr4 . exon 377993 378237 . - . ID=Thaps4175.2;Parent=Thaps4175;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 378331 378476 . - 0 ID=Thaps4175;Parent=Thaps4175;rank=1 chr4 . exon 378331 378476 . - . ID=Thaps4175.1;Parent=Thaps4175;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . biological_region 380812 380813 0.999 - . logic_name=eponine chr4 . repeat_region 382042 382090 . ? . description=trf chr4 . repeat_region 387618 387644 . ? . description=trf chr4 . repeat_region 387680 387727 . ? . description=trf chr4 ensembl protein_coding_gene 380038 380439 . + . ID=Thaps19058;biotype=protein_coding;description=Phosphatidate cytidylyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C152];external_name=Thaps19058;logic_name=jgi_thaps3 chr4 ensembl transcript 380038 380439 . + . ID=Thaps19058;Parent=Thaps19058;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 380038 380439 . + 0 ID=Thaps19058;Parent=Thaps19058;rank=1 chr4 . exon 380038 380439 . + . ID=Thaps19058.1;Parent=Thaps19058;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 380701 384505 . + . ID=Thaps22120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C153];external_name=Thaps22120;logic_name=jgi_thaps3 chr4 ensembl transcript 380701 384505 . + . ID=Thaps22120;Parent=Thaps22120;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 380701 381863 . + 0 ID=Thaps22120;Parent=Thaps22120;rank=1 chr4 . exon 380701 381863 . + . ID=Thaps22120.1;Parent=Thaps22120;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 382036 382116 . + 0 ID=Thaps22120;Parent=Thaps22120;rank=2 chr4 . exon 382036 382116 . + . ID=Thaps22120.2;Parent=Thaps22120;constitutive=1;rank=2 chr4 . CDS 382230 382391 . + 0 ID=Thaps22120;Parent=Thaps22120;rank=3 chr4 . exon 382230 382391 . + . ID=Thaps22120.3;Parent=Thaps22120;constitutive=1;rank=3 chr4 . CDS 382536 382759 . + 0 ID=Thaps22120;Parent=Thaps22120;rank=4 chr4 . exon 382536 382759 . + . ID=Thaps22120.4;Parent=Thaps22120;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 382882 383166 . + 0 ID=Thaps22120;Parent=Thaps22120;rank=5 chr4 . exon 382882 383166 . + . ID=Thaps22120.5;Parent=Thaps22120;constitutive=1;rank=5 chr4 . CDS 383390 383686 . + 0 ID=Thaps22120;Parent=Thaps22120;rank=6 chr4 . exon 383390 383686 . + . ID=Thaps22120.6;Parent=Thaps22120;constitutive=1;rank=6 chr4 . CDS 383733 384505 . + 0 ID=Thaps22120;Parent=Thaps22120;rank=7 chr4 . exon 383733 384505 . + . ID=Thaps22120.7;Parent=Thaps22120;constitutive=1;ensembl_end_phase=2;rank=7 chr4 ensembl protein_coding_gene 385048 386571 . - . ID=Thaps22121;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C154];external_name=Thaps22121;logic_name=jgi_thaps3 chr4 ensembl transcript 385048 386571 . - . ID=Thaps22121;Parent=Thaps22121;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 385048 386571 . - 0 ID=Thaps22121;Parent=Thaps22121;rank=1 chr4 . exon 385048 386571 . - . ID=Thaps22121.1;Parent=Thaps22121;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 386919 388232 . + . ID=Thaps4179;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C155];external_name=Thaps4179;logic_name=jgi_thaps3 chr4 ensembl transcript 386919 388232 . + . ID=Thaps4179;Parent=Thaps4179;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 386919 388232 . + 0 ID=Thaps4179;Parent=Thaps4179;rank=1 chr4 . exon 386919 388232 . + . ID=Thaps4179.1;Parent=Thaps4179;constitutive=1;rank=1 chr4 . repeat_region 393920 393982 . ? . description=dust chr4 ensembl protein_coding_gene 389108 391067 . + . ID=Thaps22122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C156];external_name=Thaps22122;logic_name=jgi_thaps3 chr4 ensembl transcript 389108 391067 . + . ID=Thaps22122;Parent=Thaps22122;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 389108 389302 . + 0 ID=Thaps22122;Parent=Thaps22122;rank=1 chr4 . exon 389108 389302 . + . ID=Thaps22122.1;Parent=Thaps22122;constitutive=1;rank=1 chr4 . CDS 389396 389470 . + 0 ID=Thaps22122;Parent=Thaps22122;rank=2 chr4 . exon 389396 389470 . + . ID=Thaps22122.2;Parent=Thaps22122;constitutive=1;rank=2 chr4 . CDS 389567 390185 . + 0 ID=Thaps22122;Parent=Thaps22122;rank=3 chr4 . exon 389567 390185 . + . ID=Thaps22122.3;Parent=Thaps22122;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 390271 391067 . + 0 ID=Thaps22122;Parent=Thaps22122;rank=4 chr4 . exon 390271 391067 . + . ID=Thaps22122.4;Parent=Thaps22122;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 395694 397324 . - . ID=Thaps22124;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C159];external_name=Thaps22124;logic_name=jgi_thaps3 chr4 ensembl transcript 395694 397324 . - . ID=Thaps22124;Parent=Thaps22124;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 395694 396247 . - 0 ID=Thaps22124;Parent=Thaps22124;rank=5 chr4 . exon 395694 396247 . - . ID=Thaps22124.5;Parent=Thaps22124;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 396274 396678 . - 0 ID=Thaps22124;Parent=Thaps22124;rank=4 chr4 . exon 396274 396678 . - . ID=Thaps22124.4;Parent=Thaps22124;constitutive=1;rank=4 chr4 . CDS 396767 396835 . - 0 ID=Thaps22124;Parent=Thaps22124;rank=3 chr4 . exon 396767 396835 . - . ID=Thaps22124.3;Parent=Thaps22124;constitutive=1;rank=3 chr4 . CDS 396890 396935 . - 0 ID=Thaps22124;Parent=Thaps22124;rank=2 chr4 . exon 396890 396935 . - . ID=Thaps22124.2;Parent=Thaps22124;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 397025 397324 . - 0 ID=Thaps22124;Parent=Thaps22124;rank=1 chr4 . exon 397025 397324 . - . ID=Thaps22124.1;Parent=Thaps22124;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 392725 393424 . - . ID=Thaps268625;biotype=protein_coding;description=V-snare protein%2C Vti1 C-terminal half-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C157];external_name=Thaps268625;logic_name=jgi_thaps3 chr4 ensembl transcript 392725 393424 . - . ID=Thaps268625;Parent=Thaps268625;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 392725 392971 . - 0 ID=Thaps268625;Parent=Thaps268625;rank=3 chr4 . exon 392725 392971 . - . ID=Thaps268625.3;Parent=Thaps268625;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 393075 393097 . - 0 ID=Thaps268625;Parent=Thaps268625;rank=2 chr4 . exon 393075 393097 . - . ID=Thaps268625.2;Parent=Thaps268625;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 393344 393424 . - 0 ID=Thaps268625;Parent=Thaps268625;rank=1 chr4 . exon 393344 393424 . - . ID=Thaps268625.1;Parent=Thaps268625;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 394110 395573 . + . ID=Thaps4182;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C158];external_name=Thaps4182;logic_name=jgi_thaps3 chr4 ensembl transcript 394110 395573 . + . ID=Thaps4182;Parent=Thaps4182;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 394110 395573 . + 0 ID=Thaps4182;Parent=Thaps4182;rank=1 chr4 . exon 394110 395573 . + . ID=Thaps4182.1;Parent=Thaps4182;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 397798 400884 . + . ID=Thaps4184;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C160];external_name=Thaps4184;logic_name=jgi_thaps3 chr4 ensembl transcript 397798 400884 . + . ID=Thaps4184;Parent=Thaps4184;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 397798 398572 . + 0 ID=Thaps4184;Parent=Thaps4184;rank=1 chr4 . exon 397798 398572 . + . ID=Thaps4184.1;Parent=Thaps4184;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 398656 398804 . + 0 ID=Thaps4184;Parent=Thaps4184;rank=2 chr4 . exon 398656 398804 . + . ID=Thaps4184.2;Parent=Thaps4184;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 398899 400884 . + 0 ID=Thaps4184;Parent=Thaps4184;rank=3 chr4 . repeat_region 400589 400674 . ? . description=trf chr4 ensembl protein_coding_gene 401631 404297 . + . ID=Thaps370;biotype=protein_coding;description=Ribonucleoside-diphosphate reductase [Source:UniProtKB/TrEMBL%3BAcc:B8C161];external_name=RIR1_1;logic_name=jgi_thaps3 chr4 ensembl transcript 401631 404297 . + . ID=Thaps370;Parent=Thaps370;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 401631 401726 . + 0 ID=Thaps370;Parent=Thaps370;rank=1 chr4 . exon 401631 401726 . + . ID=Thaps370.1;Parent=Thaps370;constitutive=1;rank=1 chr4 . CDS 401867 403368 . + 0 ID=Thaps370;Parent=Thaps370;rank=2 chr4 . exon 401867 403368 . + . ID=Thaps370.2;Parent=Thaps370;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 403454 404297 . + 0 ID=Thaps370;Parent=Thaps370;rank=3 chr4 . exon 403454 404297 . + . ID=Thaps370.3;Parent=Thaps370;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 406495 407547 . + . ID=Thaps40193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C163];external_name=Thaps40193;logic_name=jgi_thaps3 chr4 ensembl transcript 406495 407547 . + . ID=Thaps40193;Parent=Thaps40193;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 406495 406531 . + 0 ID=Thaps40193;Parent=Thaps40193;rank=1 chr4 . exon 406495 406531 . + . ID=Thaps40193.1;Parent=Thaps40193;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 406649 407547 . + 0 ID=Thaps40193;Parent=Thaps40193;rank=2 chr4 . exon 406649 407547 . + . ID=Thaps40193.2;Parent=Thaps40193;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . exon 398899 400884 . + . ID=Thaps4184.3;Parent=Thaps4184;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 404494 405588 . - . ID=Thaps4186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C162];external_name=Thaps4186;logic_name=jgi_thaps3 chr4 ensembl transcript 404494 405588 . - . ID=Thaps4186;Parent=Thaps4186;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 404494 405588 . - 0 ID=Thaps4186;Parent=Thaps4186;rank=1 chr4 . exon 404494 405588 . - . ID=Thaps4186.1;Parent=Thaps4186;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 407959 409113 . - . ID=Thaps4189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C164];external_name=Thaps4189;logic_name=jgi_thaps3 chr4 ensembl transcript 407959 409113 . - . ID=Thaps4189;Parent=Thaps4189;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 407959 408348 . - 0 ID=Thaps4189;Parent=Thaps4189;rank=3 chr4 . exon 407959 408348 . - . ID=Thaps4189.3;Parent=Thaps4189;constitutive=1;rank=3 chr4 . CDS 408465 408728 . - 0 ID=Thaps4189;Parent=Thaps4189;rank=2 chr4 . exon 408465 408728 . - . ID=Thaps4189.2;Parent=Thaps4189;constitutive=1;rank=2 chr4 . CDS 408832 409113 . - 0 ID=Thaps4189;Parent=Thaps4189;rank=1 chr4 . repeat_region 410497 410504 . ? . description=dust chr4 . repeat_region 417861 417881 . ? . description=dust chr4 . repeat_region 417898 417917 . ? . description=dust chr4 . biological_region 417954 417960 0.999 + . logic_name=eponine chr4 ensembl protein_coding_gene 418491 420737 . + . ID=Thaps13117;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C169];external_name=Thaps13117;logic_name=jgi_thaps3 chr4 ensembl transcript 418491 420737 . + . ID=Thaps13117;Parent=Thaps13117;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 418491 418634 . + 0 ID=Thaps13117;Parent=Thaps13117;rank=1 chr4 . exon 418491 418634 . + . ID=Thaps13117.1;Parent=Thaps13117;constitutive=1;rank=1 chr4 . CDS 419200 419859 . + 0 ID=Thaps13117;Parent=Thaps13117;rank=2 chr4 . CDS 419937 420554 . + 0 ID=Thaps13117;Parent=Thaps13117;rank=3 chr4 . CDS 420600 420737 . + 0 ID=Thaps13117;Parent=Thaps13117;rank=4 chr4 . exon 408832 409113 . - . ID=Thaps4189.1;Parent=Thaps4189;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 409772 410326 . - . ID=Thaps4190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C165];external_name=Thaps4190;logic_name=jgi_thaps3 chr4 ensembl transcript 409772 410326 . - . ID=Thaps4190;Parent=Thaps4190;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 409772 410326 . - 0 ID=Thaps4190;Parent=Thaps4190;rank=1 chr4 . exon 409772 410326 . - . ID=Thaps4190.1;Parent=Thaps4190;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 411042 412025 . + . ID=Thaps4191;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C166];external_name=Thaps4191;logic_name=jgi_thaps3 chr4 ensembl transcript 411042 412025 . + . ID=Thaps4191;Parent=Thaps4191;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 411042 412025 . + 0 ID=Thaps4191;Parent=Thaps4191;rank=1 chr4 . exon 411042 412025 . + . ID=Thaps4191.1;Parent=Thaps4191;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 414176 416188 . + . ID=Thaps4192;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C167];external_name=Thaps4192;logic_name=jgi_thaps3 chr4 ensembl transcript 414176 416188 . + . ID=Thaps4192;Parent=Thaps4192;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 414176 416080 . + 0 ID=Thaps4192;Parent=Thaps4192;rank=1 chr4 . exon 414176 416080 . + . ID=Thaps4192.1;Parent=Thaps4192;constitutive=1;rank=1 chr4 . CDS 416153 416188 . + 0 ID=Thaps4192;Parent=Thaps4192;rank=2 chr4 . exon 416153 416188 . + . ID=Thaps4192.2;Parent=Thaps4192;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 416478 417828 . - . ID=Thaps4193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C168];external_name=Thaps4193;logic_name=jgi_thaps3 chr4 ensembl transcript 416478 417828 . - . ID=Thaps4193;Parent=Thaps4193;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 416478 416974 . - 0 ID=Thaps4193;Parent=Thaps4193;rank=2 chr4 . exon 416478 416974 . - . ID=Thaps4193.2;Parent=Thaps4193;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 417075 417828 . - 0 ID=Thaps4193;Parent=Thaps4193;rank=1 chr4 . exon 417075 417828 . - . ID=Thaps4193.1;Parent=Thaps4193;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 419200 419859 . + . ID=Thaps13117.2;Parent=Thaps13117;constitutive=1;rank=2 chr4 . exon 419937 420554 . + . ID=Thaps13117.3;Parent=Thaps13117;constitutive=1;rank=3 chr4 . exon 420600 420737 . + . ID=Thaps13117.4;Parent=Thaps13117;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 421921 423148 . - . ID=Thaps22127;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C170];external_name=Thaps22127;logic_name=jgi_thaps3 chr4 ensembl transcript 421921 423148 . - . ID=Thaps22127;Parent=Thaps22127;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 421921 422152 . - 0 ID=Thaps22127;Parent=Thaps22127;rank=6 chr4 . exon 421921 422152 . - . ID=Thaps22127.6;Parent=Thaps22127;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 422255 422311 . - 0 ID=Thaps22127;Parent=Thaps22127;rank=5 chr4 . exon 422255 422311 . - . ID=Thaps22127.5;Parent=Thaps22127;constitutive=1;rank=5 chr4 . CDS 422406 422421 . - 0 ID=Thaps22127;Parent=Thaps22127;rank=4 chr4 . exon 422406 422421 . - . ID=Thaps22127.4;Parent=Thaps22127;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 422506 422643 . - 0 ID=Thaps22127;Parent=Thaps22127;rank=3 chr4 . exon 422506 422643 . - . ID=Thaps22127.3;Parent=Thaps22127;constitutive=1;rank=3 chr4 . CDS 422744 422867 . - 0 ID=Thaps22127;Parent=Thaps22127;rank=2 chr4 . exon 422744 422867 . - . ID=Thaps22127.2;Parent=Thaps22127;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 423023 423148 . - 0 ID=Thaps22127;Parent=Thaps22127;rank=1 chr4 . exon 423023 423148 . - . ID=Thaps22127.1;Parent=Thaps22127;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 427898 428287 . + . ID=Thaps262068;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C171];external_name=Thaps262068;logic_name=jgi_thaps3 chr4 ensembl transcript 427898 428287 . + . ID=Thaps262068;Parent=Thaps262068;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 427898 428287 . + 0 ID=Thaps262068;Parent=Thaps262068;rank=1 chr4 . exon 427898 428287 . + . ID=Thaps262068.1;Parent=Thaps262068;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 428290 430573 . - . ID=Thaps262069;biotype=protein_coding;description=Na+/H+ exchanger [Source:UniProtKB/TrEMBL%3BAcc:B8C172];external_name=Thaps262069;logic_name=jgi_thaps3 chr4 ensembl transcript 428290 430573 . - . ID=Thaps262069;Parent=Thaps262069;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 428290 428958 . - 0 ID=Thaps262069;Parent=Thaps262069;rank=3 chr4 . exon 428290 428958 . - . ID=Thaps262069.3;Parent=Thaps262069;constitutive=1;rank=3 chr4 . CDS 429035 429277 . - 0 ID=Thaps262069;Parent=Thaps262069;rank=2 chr4 . CDS 429361 430573 . - 0 ID=Thaps262069;Parent=Thaps262069;rank=1 chr4 . repeat_region 430858 431014 . + . description=TE2a_TP chr4 . repeat_region 433034 433041 . ? . description=dust chr4 ensembl protein_coding_gene 431577 434557 . + . ID=Thaps22128;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C173];external_name=Thaps22128;logic_name=jgi_thaps3 chr4 ensembl transcript 431577 434557 . + . ID=Thaps22128;Parent=Thaps22128;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 431577 431632 . + 0 ID=Thaps22128;Parent=Thaps22128;rank=1 chr4 . exon 431577 431632 . + . ID=Thaps22128.1;Parent=Thaps22128;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 431738 433014 . + 0 ID=Thaps22128;Parent=Thaps22128;rank=2 chr4 . exon 431738 433014 . + . ID=Thaps22128.2;Parent=Thaps22128;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 433196 433340 . + 0 ID=Thaps22128;Parent=Thaps22128;rank=3 chr4 . exon 433196 433340 . + . ID=Thaps22128.3;Parent=Thaps22128;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 433433 433470 . + 0 ID=Thaps22128;Parent=Thaps22128;rank=4 chr4 . exon 433433 433470 . + . ID=Thaps22128.4;Parent=Thaps22128;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 433620 433816 . + 0 ID=Thaps22128;Parent=Thaps22128;rank=5 chr4 . exon 433620 433816 . + . ID=Thaps22128.5;Parent=Thaps22128;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 433904 434557 . + 0 ID=Thaps22128;Parent=Thaps22128;rank=6 chr4 . exon 433904 434557 . + . ID=Thaps22128.6;Parent=Thaps22128;constitutive=1;rank=6 chr4 . exon 429035 429277 . - . ID=Thaps262069.2;Parent=Thaps262069;constitutive=1;rank=2 chr4 . exon 429361 430573 . - . ID=Thaps262069.1;Parent=Thaps262069;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 437640 439495 . + . ID=Thaps262070;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C175];external_name=Thaps262070;logic_name=jgi_thaps3 chr4 ensembl transcript 437640 439495 . + . ID=Thaps262070;Parent=Thaps262070;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 437640 438492 . + 0 ID=Thaps262070;Parent=Thaps262070;rank=1 chr4 . exon 437640 438492 . + . ID=Thaps262070.1;Parent=Thaps262070;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 438597 438778 . + 0 ID=Thaps262070;Parent=Thaps262070;rank=2 chr4 . exon 438597 438778 . + . ID=Thaps262070.2;Parent=Thaps262070;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 438849 439074 . + 0 ID=Thaps262070;Parent=Thaps262070;rank=3 chr4 . CDS 439132 439495 . + 0 ID=Thaps262070;Parent=Thaps262070;rank=4 chr4 ensembl protein_coding_gene 434793 436400 . - . ID=Thaps4199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C174];external_name=Thaps4199;logic_name=jgi_thaps3 chr4 ensembl transcript 434793 436400 . - . ID=Thaps4199;Parent=Thaps4199;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 434793 435359 . - 0 ID=Thaps4199;Parent=Thaps4199;rank=4 chr4 . exon 434793 435359 . - . ID=Thaps4199.4;Parent=Thaps4199;constitutive=1;rank=4 chr4 . CDS 435479 435969 . - 0 ID=Thaps4199;Parent=Thaps4199;rank=3 chr4 . exon 435479 435969 . - . ID=Thaps4199.3;Parent=Thaps4199;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 436021 436036 . - 0 ID=Thaps4199;Parent=Thaps4199;rank=2 chr4 . exon 436021 436036 . - . ID=Thaps4199.2;Parent=Thaps4199;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 436107 436400 . - 0 ID=Thaps4199;Parent=Thaps4199;rank=1 chr4 . exon 436107 436400 . - . ID=Thaps4199.1;Parent=Thaps4199;constitutive=1;rank=1 chr4 . repeat_region 439882 439903 . ? . description=trf chr4 . repeat_region 448217 448263 . ? . description=trf chr4 . exon 438849 439074 . + . ID=Thaps262070.3;Parent=Thaps262070;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . exon 439132 439495 . + . ID=Thaps262070.4;Parent=Thaps262070;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 439921 440175 . + . ID=Thaps33699;biotype=protein_coding;external_name=Thaps33699;logic_name=jgi_thaps3 chr4 ensembl transcript 439921 440175 . + . ID=Thaps33699;Parent=Thaps33699;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 439921 440175 . + 0 ID=Thaps33699;Parent=Thaps33699;rank=1 chr4 . exon 439921 440175 . + . ID=Thaps33699.1;Parent=Thaps33699;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 440572 441890 . + . ID=Thaps40200;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C176];external_name=Thaps40200;logic_name=jgi_thaps3 chr4 ensembl transcript 440572 441890 . + . ID=Thaps40200;Parent=Thaps40200;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 440572 441168 . + 0 ID=Thaps40200;Parent=Thaps40200;rank=1 chr4 . exon 440572 441168 . + . ID=Thaps40200.1;Parent=Thaps40200;constitutive=1;rank=1 chr4 . CDS 441252 441890 . + 0 ID=Thaps40200;Parent=Thaps40200;rank=2 chr4 . exon 441252 441890 . + . ID=Thaps40200.2;Parent=Thaps40200;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 445547 448180 . - . ID=Thaps4202;biotype=protein_coding;description=Pas-domain protein [Source:UniProtKB/TrEMBL%3BAcc:B8C177];external_name=Thaps4202;logic_name=jgi_thaps3 chr4 ensembl transcript 445547 448180 . - . ID=Thaps4202;Parent=Thaps4202;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 445547 446546 . - 0 ID=Thaps4202;Parent=Thaps4202;rank=2 chr4 . exon 445547 446546 . - . ID=Thaps4202.2;Parent=Thaps4202;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 446643 448180 . - 0 ID=Thaps4202;Parent=Thaps4202;rank=1 chr4 . exon 446643 448180 . - . ID=Thaps4202.1;Parent=Thaps4202;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . repeat_region 449771 449802 . ? . description=dust chr4 . repeat_region 450455 450463 . ? . description=dust chr4 . repeat_region 455906 455913 . ? . description=dust chr4 . repeat_region 457164 457195 . ? . description=dust chr4 ensembl protein_coding_gene 452507 452818 . + . ID=Thaps19501;biotype=protein_coding;description=RS10%2C ribosomal protein 10 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C179];external_name=RS10;logic_name=jgi_thaps3 chr4 ensembl transcript 452507 452818 . + . ID=Thaps19501;Parent=Thaps19501;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 452507 452818 . + 0 ID=Thaps19501;Parent=Thaps19501;rank=1 chr4 . exon 452507 452818 . + . ID=Thaps19501.1;Parent=Thaps19501;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 453715 455233 . - . ID=Thaps22134;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C180];external_name=Thaps22134;logic_name=jgi_thaps3 chr4 ensembl transcript 453715 455233 . - . ID=Thaps22134;Parent=Thaps22134;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 453715 453768 . - 0 ID=Thaps22134;Parent=Thaps22134;rank=2 chr4 . exon 453715 453768 . - . ID=Thaps22134.2;Parent=Thaps22134;constitutive=1;rank=2 chr4 . CDS 453866 455233 . - 0 ID=Thaps22134;Parent=Thaps22134;rank=1 chr4 . exon 453866 455233 . - . ID=Thaps22134.1;Parent=Thaps22134;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 457773 459685 . - . ID=Thaps22135;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C182];external_name=Thaps22135;logic_name=jgi_thaps3 chr4 ensembl transcript 457773 459685 . - . ID=Thaps22135;Parent=Thaps22135;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 457773 458713 . - 0 ID=Thaps22135;Parent=Thaps22135;rank=6 chr4 . exon 457773 458713 . - . ID=Thaps22135.6;Parent=Thaps22135;constitutive=1;ensembl_end_phase=2;rank=6 chr4 . CDS 458808 458856 . - 0 ID=Thaps22135;Parent=Thaps22135;rank=5 chr4 . CDS 458951 459028 . - 0 ID=Thaps22135;Parent=Thaps22135;rank=4 chr4 . CDS 459122 459157 . - 0 ID=Thaps22135;Parent=Thaps22135;rank=3 chr4 . CDS 459271 459358 . - 0 ID=Thaps22135;Parent=Thaps22135;rank=2 chr4 . CDS 459444 459685 . - 0 ID=Thaps22135;Parent=Thaps22135;rank=1 chr4 ensembl protein_coding_gene 450583 451994 . - . ID=Thaps268629;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C178];external_name=Thaps268629;logic_name=jgi_thaps3 chr4 ensembl transcript 450583 451994 . - . ID=Thaps268629;Parent=Thaps268629;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 450583 450605 . - 0 ID=Thaps268629;Parent=Thaps268629;rank=3 chr4 . exon 450583 450605 . - . ID=Thaps268629.3;Parent=Thaps268629;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 450721 451084 . - 0 ID=Thaps268629;Parent=Thaps268629;rank=2 chr4 . exon 450721 451084 . - . ID=Thaps268629.2;Parent=Thaps268629;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 451167 451994 . - 0 ID=Thaps268629;Parent=Thaps268629;rank=1 chr4 . exon 451167 451994 . - . ID=Thaps268629.1;Parent=Thaps268629;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 456091 457306 . - . ID=Thaps4207;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C181];external_name=Thaps4207;logic_name=jgi_thaps3 chr4 ensembl transcript 456091 457306 . - . ID=Thaps4207;Parent=Thaps4207;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 456091 456724 . - 0 ID=Thaps4207;Parent=Thaps4207;rank=2 chr4 . exon 456091 456724 . - . ID=Thaps4207.2;Parent=Thaps4207;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 456915 457306 . - 0 ID=Thaps4207;Parent=Thaps4207;rank=1 chr4 . exon 456915 457306 . - . ID=Thaps4207.1;Parent=Thaps4207;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . repeat_region 463628 463655 . ? . description=trf chr4 ensembl protein_coding_gene 461162 462565 . + . ID=Thaps15114;biotype=protein_coding;description=Aminoacylase 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C183];external_name=Thaps15114;logic_name=jgi_thaps3 chr4 ensembl transcript 461162 462565 . + . ID=Thaps15114;Parent=Thaps15114;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 461162 461294 . + 0 ID=Thaps15114;Parent=Thaps15114;rank=1 chr4 . exon 461162 461294 . + . ID=Thaps15114.1;Parent=Thaps15114;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 461367 461495 . + 0 ID=Thaps15114;Parent=Thaps15114;rank=2 chr4 . exon 461367 461495 . + . ID=Thaps15114.2;Parent=Thaps15114;constitutive=1;rank=2 chr4 . CDS 461592 461807 . + 0 ID=Thaps15114;Parent=Thaps15114;rank=3 chr4 . exon 461592 461807 . + . ID=Thaps15114.3;Parent=Thaps15114;constitutive=1;rank=3 chr4 . CDS 461898 462565 . + 0 ID=Thaps15114;Parent=Thaps15114;rank=4 chr4 . exon 461898 462565 . + . ID=Thaps15114.4;Parent=Thaps15114;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . exon 458808 458856 . - . ID=Thaps22135.5;Parent=Thaps22135;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . exon 458951 459028 . - . ID=Thaps22135.4;Parent=Thaps22135;constitutive=1;rank=4 chr4 . exon 459122 459157 . - . ID=Thaps22135.3;Parent=Thaps22135;constitutive=1;rank=3 chr4 . exon 459271 459358 . - . ID=Thaps22135.2;Parent=Thaps22135;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 459444 459685 . - . ID=Thaps22135.1;Parent=Thaps22135;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 464085 465203 . - . ID=Thaps262078;biotype=protein_coding;description=Amino acid transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C185];external_name=Thaps262078;logic_name=jgi_thaps3 chr4 ensembl transcript 464085 465203 . - . ID=Thaps262078;Parent=Thaps262078;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 464085 464212 . - 0 ID=Thaps262078;Parent=Thaps262078;rank=4 chr4 . exon 464085 464212 . - . ID=Thaps262078.4;Parent=Thaps262078;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 464244 464280 . - 0 ID=Thaps262078;Parent=Thaps262078;rank=3 chr4 . exon 464244 464280 . - . ID=Thaps262078.3;Parent=Thaps262078;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 464292 464998 . - 0 ID=Thaps262078;Parent=Thaps262078;rank=2 chr4 . exon 464292 464998 . - . ID=Thaps262078.2;Parent=Thaps262078;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 465029 465203 . - 0 ID=Thaps262078;Parent=Thaps262078;rank=1 chr4 . exon 465029 465203 . - . ID=Thaps262078.1;Parent=Thaps262078;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 463075 463617 . - . ID=Thaps33578;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C184];external_name=Thaps33578;logic_name=jgi_thaps3 chr4 ensembl transcript 463075 463617 . - . ID=Thaps33578;Parent=Thaps33578;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 463075 463617 . - 0 ID=Thaps33578;Parent=Thaps33578;rank=1 chr4 . exon 463075 463617 . - . ID=Thaps33578.1;Parent=Thaps33578;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 466318 467337 . + . ID=Thaps40206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C186];external_name=Thaps40206;logic_name=jgi_thaps3 chr4 ensembl transcript 466318 467337 . + . ID=Thaps40206;Parent=Thaps40206;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 466318 466592 . + 0 ID=Thaps40206;Parent=Thaps40206;rank=1 chr4 . exon 466318 466592 . + . ID=Thaps40206.1;Parent=Thaps40206;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 466698 467337 . + 0 ID=Thaps40206;Parent=Thaps40206;rank=2 chr4 . exon 466698 467337 . + . ID=Thaps40206.2;Parent=Thaps40206;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . repeat_region 477787 477796 . ? . description=dust chr4 ensembl protein_coding_gene 469693 474210 . + . ID=Thaps22138;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C187];external_name=Thaps22138;logic_name=jgi_thaps3 chr4 ensembl transcript 469693 474210 . + . ID=Thaps22138;Parent=Thaps22138;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 469693 472470 . + 0 ID=Thaps22138;Parent=Thaps22138;rank=1 chr4 . exon 469693 472470 . + . ID=Thaps22138.1;Parent=Thaps22138;constitutive=1;rank=1 chr4 . CDS 472553 472918 . + 0 ID=Thaps22138;Parent=Thaps22138;rank=2 chr4 . exon 472553 472918 . + . ID=Thaps22138.2;Parent=Thaps22138;constitutive=1;rank=2 chr4 . CDS 472999 474210 . + 0 ID=Thaps22138;Parent=Thaps22138;rank=3 chr4 . exon 472999 474210 . + . ID=Thaps22138.3;Parent=Thaps22138;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 474318 475682 . - . ID=Thaps4214;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C188];external_name=Thaps4214;logic_name=jgi_thaps3 chr4 ensembl transcript 474318 475682 . - . ID=Thaps4214;Parent=Thaps4214;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 474318 475682 . - 0 ID=Thaps4214;Parent=Thaps4214;rank=1 chr4 . exon 474318 475682 . - . ID=Thaps4214.1;Parent=Thaps4214;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 476537 477592 . - . ID=Thaps4215;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C189];external_name=Thaps4215;logic_name=jgi_thaps3 chr4 ensembl transcript 476537 477592 . - . ID=Thaps4215;Parent=Thaps4215;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 476537 477592 . - 0 ID=Thaps4215;Parent=Thaps4215;rank=1 chr4 . exon 476537 477592 . - . ID=Thaps4215.1;Parent=Thaps4215;constitutive=1;rank=1 chr4 . repeat_region 484703 484782 . ? . description=trf chr4 ensembl protein_coding_gene 478623 480224 . - . ID=Thaps22139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C190];external_name=Thaps22139;logic_name=jgi_thaps3 chr4 ensembl transcript 478623 480224 . - . ID=Thaps22139;Parent=Thaps22139;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 478623 480224 . - 0 ID=Thaps22139;Parent=Thaps22139;rank=1 chr4 . exon 478623 480224 . - . ID=Thaps22139.1;Parent=Thaps22139;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 483270 484235 . - . ID=Thaps22140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C193];external_name=Thaps22140;logic_name=jgi_thaps3 chr4 ensembl transcript 483270 484235 . - . ID=Thaps22140;Parent=Thaps22140;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 483270 484235 . - 0 ID=Thaps22140;Parent=Thaps22140;rank=1 chr4 . exon 483270 484235 . - . ID=Thaps22140.1;Parent=Thaps22140;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 484664 488425 . - . ID=Thaps22141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C194];external_name=Thaps22141;logic_name=jgi_thaps3 chr4 ensembl transcript 484664 488425 . - . ID=Thaps22141;Parent=Thaps22141;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 484664 488425 . - 0 ID=Thaps22141;Parent=Thaps22141;rank=1 chr4 . exon 484664 488425 . - . ID=Thaps22141.1;Parent=Thaps22141;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 480588 481865 . + . ID=Thaps4217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C191];external_name=Thaps4217;logic_name=jgi_thaps3 chr4 ensembl transcript 480588 481865 . + . ID=Thaps4217;Parent=Thaps4217;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 480588 481865 . + 0 ID=Thaps4217;Parent=Thaps4217;rank=1 chr4 . exon 480588 481865 . + . ID=Thaps4217.1;Parent=Thaps4217;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 482180 483088 . + . ID=Thaps4218;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C192];external_name=Thaps4218;logic_name=jgi_thaps3 chr4 ensembl transcript 482180 483088 . + . ID=Thaps4218;Parent=Thaps4218;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 482180 483088 . + 0 ID=Thaps4218;Parent=Thaps4218;rank=1 chr4 . exon 482180 483088 . + . ID=Thaps4218.1;Parent=Thaps4218;constitutive=1;rank=1 chr4 . repeat_region 494794 494819 . ? . description=dust chr4 ensembl protein_coding_gene 488928 490810 . - . ID=Thaps22142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C195];external_name=Thaps22142;logic_name=jgi_thaps3 chr4 ensembl transcript 488928 490810 . - . ID=Thaps22142;Parent=Thaps22142;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 488928 489515 . - 0 ID=Thaps22142;Parent=Thaps22142;rank=4 chr4 . exon 488928 489515 . - . ID=Thaps22142.4;Parent=Thaps22142;constitutive=1;rank=4 chr4 . CDS 489936 490307 . - 0 ID=Thaps22142;Parent=Thaps22142;rank=3 chr4 . exon 489936 490307 . - . ID=Thaps22142.3;Parent=Thaps22142;constitutive=1;rank=3 chr4 . CDS 490380 490421 . - 0 ID=Thaps22142;Parent=Thaps22142;rank=2 chr4 . exon 490380 490421 . - . ID=Thaps22142.2;Parent=Thaps22142;constitutive=1;rank=2 chr4 . CDS 490514 490810 . - 0 ID=Thaps22142;Parent=Thaps22142;rank=1 chr4 . exon 490514 490810 . - . ID=Thaps22142.1;Parent=Thaps22142;constitutive=1;rank=1 chr4 ensembl gene 495709 496843 . + . ID=Thaps262079;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr4 ensembl transcript 495709 496843 . + . ID=Thaps262079;Parent=Thaps262079;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr4 . exon 495709 495751 . + . ID=Thaps262079.1;Parent=Thaps262079;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 495862 496029 . + . ID=Thaps262079.2;Parent=Thaps262079;constitutive=1;rank=2 chr4 . exon 496093 496454 . + . ID=Thaps262079.3;Parent=Thaps262079;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . exon 496482 496843 . + . ID=Thaps262079.4;Parent=Thaps262079;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 497133 497758 . + . ID=Thaps27773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C196];external_name=Thaps27773;logic_name=jgi_thaps3 chr4 ensembl transcript 497133 497758 . + . ID=Thaps27773;Parent=Thaps27773;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 497133 497667 . + 0 ID=Thaps27773;Parent=Thaps27773;rank=1 chr4 . exon 497133 497667 . + . ID=Thaps27773.1;Parent=Thaps27773;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 497757 497758 . + 0 ID=Thaps27773;Parent=Thaps27773;rank=2 chr4 . exon 497757 497758 . + . ID=Thaps27773.2;Parent=Thaps27773;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . repeat_region 499044 499108 . + . description=Harbinger2N_TP chr4 . repeat_region 499049 499099 . ? . description=trf chr4 . repeat_region 502973 502997 . ? . description=trf chr4 . repeat_region 503408 503432 . ? . description=trf chr4 . repeat_region 507135 507162 . ? . description=trf chr4 ensembl protein_coding_gene 505193 506266 . - . ID=Thaps27776;biotype=protein_coding;description=Probable dihydroorotase [Source:UniProtKB/TrEMBL%3BAcc:B8C1A0];external_name=Thaps27776;logic_name=jgi_thaps3 chr4 ensembl transcript 505193 506266 . - . ID=Thaps27776;Parent=Thaps27776;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 505193 506266 . - 0 ID=Thaps27776;Parent=Thaps27776;rank=1 chr4 . exon 505193 506266 . - . ID=Thaps27776.1;Parent=Thaps27776;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 500419 501420 . - . ID=Thaps4223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C197];external_name=Thaps4223;logic_name=jgi_thaps3 chr4 ensembl transcript 500419 501420 . - . ID=Thaps4223;Parent=Thaps4223;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 500419 501420 . - 0 ID=Thaps4223;Parent=Thaps4223;rank=1 chr4 . exon 500419 501420 . - . ID=Thaps4223.1;Parent=Thaps4223;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 501970 503497 . + . ID=Thaps4224;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C198];external_name=Thaps4224;logic_name=jgi_thaps3 chr4 ensembl transcript 501970 503497 . + . ID=Thaps4224;Parent=Thaps4224;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 501970 502884 . + 0 ID=Thaps4224;Parent=Thaps4224;rank=1 chr4 . exon 501970 502884 . + . ID=Thaps4224.1;Parent=Thaps4224;constitutive=1;rank=1 chr4 . CDS 503015 503497 . + 0 ID=Thaps4224;Parent=Thaps4224;rank=2 chr4 . exon 503015 503497 . + . ID=Thaps4224.2;Parent=Thaps4224;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 503754 504995 . + . ID=Thaps4225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C199];external_name=Thaps4225;logic_name=jgi_thaps3 chr4 ensembl transcript 503754 504995 . + . ID=Thaps4225;Parent=Thaps4225;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 503754 504179 . + 0 ID=Thaps4225;Parent=Thaps4225;rank=1 chr4 . exon 503754 504179 . + . ID=Thaps4225.1;Parent=Thaps4225;constitutive=1;rank=1 chr4 . CDS 504283 504995 . + 0 ID=Thaps4225;Parent=Thaps4225;rank=2 chr4 . exon 504283 504995 . + . ID=Thaps4225.2;Parent=Thaps4225;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 513026 518833 . - . ID=Thaps26190;biotype=protein_coding;description=Serine hydroxymethyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C1A2];external_name=Thaps26190;logic_name=jgi_thaps3 chr4 ensembl transcript 513026 518833 . - . ID=Thaps26190;Parent=Thaps26190;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 513026 514389 . - 0 ID=Thaps26190;Parent=Thaps26190;rank=3 chr4 . exon 513026 514389 . - . ID=Thaps26190.3;Parent=Thaps26190;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 515137 515140 . - 0 ID=Thaps26190;Parent=Thaps26190;rank=2 chr4 . exon 515137 515140 . - . ID=Thaps26190.2;Parent=Thaps26190;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 518795 518833 . - 0 ID=Thaps26190;Parent=Thaps26190;rank=1 chr4 ensembl protein_coding_gene 512185 512925 . + . ID=Thaps33330;biotype=protein_coding;description=Dolichyl-phosphate beta-mannosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C1A1];external_name=Thaps33330;logic_name=jgi_thaps3 chr4 ensembl transcript 512185 512925 . + . ID=Thaps33330;Parent=Thaps33330;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 512185 512925 . + 0 ID=Thaps33330;Parent=Thaps33330;rank=1 chr4 . exon 512185 512925 . + . ID=Thaps33330.1;Parent=Thaps33330;constitutive=1;rank=1 chr4 . repeat_region 520809 520829 . ? . description=dust chr4 . exon 518795 518833 . - . ID=Thaps26190.1;Parent=Thaps26190;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 523317 526258 . + . ID=Thaps262083;biotype=protein_coding;description=ABC cassette-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1A4];external_name=Thaps262083;logic_name=jgi_thaps3 chr4 ensembl transcript 523317 526258 . + . ID=Thaps262083;Parent=Thaps262083;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 523317 524549 . + 0 ID=Thaps262083;Parent=Thaps262083;rank=1 chr4 . exon 523317 524549 . + . ID=Thaps262083.1;Parent=Thaps262083;constitutive=1;rank=1 chr4 . CDS 524562 524752 . + 0 ID=Thaps262083;Parent=Thaps262083;rank=2 chr4 . exon 524562 524752 . + . ID=Thaps262083.2;Parent=Thaps262083;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 524842 525547 . + 0 ID=Thaps262083;Parent=Thaps262083;rank=3 chr4 . exon 524842 525547 . + . ID=Thaps262083.3;Parent=Thaps262083;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 525584 526258 . + 0 ID=Thaps262083;Parent=Thaps262083;rank=4 chr4 . exon 525584 526258 . + . ID=Thaps262083.4;Parent=Thaps262083;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 526596 527691 . + . ID=Thaps33497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1A5];external_name=Thaps33497;logic_name=jgi_thaps3 chr4 ensembl transcript 526596 527691 . + . ID=Thaps33497;Parent=Thaps33497;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 526596 526713 . + 0 ID=Thaps33497;Parent=Thaps33497;rank=1 chr4 . exon 526596 526713 . + . ID=Thaps33497.1;Parent=Thaps33497;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 526804 526962 . + 0 ID=Thaps33497;Parent=Thaps33497;rank=2 chr4 . exon 526804 526962 . + . ID=Thaps33497.2;Parent=Thaps33497;constitutive=1;rank=2 chr4 . CDS 527033 527691 . + 0 ID=Thaps33497;Parent=Thaps33497;rank=3 chr4 . exon 527033 527691 . + . ID=Thaps33497.3;Parent=Thaps33497;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 527767 528594 . - . ID=Thaps40218;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1A6];external_name=Thaps40218;logic_name=jgi_thaps3 chr4 ensembl transcript 527767 528594 . - . ID=Thaps40218;Parent=Thaps40218;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 527767 528594 . - 0 ID=Thaps40218;Parent=Thaps40218;rank=1 chr4 . exon 527767 528594 . - . ID=Thaps40218.1;Parent=Thaps40218;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 519297 521950 . + . ID=Thaps4229;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1A3];external_name=Thaps4229;logic_name=jgi_thaps3 chr4 ensembl transcript 519297 521950 . + . ID=Thaps4229;Parent=Thaps4229;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 519297 519820 . + 0 ID=Thaps4229;Parent=Thaps4229;rank=1 chr4 . exon 519297 519820 . + . ID=Thaps4229.1;Parent=Thaps4229;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 520009 521133 . + 0 ID=Thaps4229;Parent=Thaps4229;rank=2 chr4 . exon 520009 521133 . + . ID=Thaps4229.2;Parent=Thaps4229;constitutive=1;rank=2 chr4 . CDS 521230 521950 . + 0 ID=Thaps4229;Parent=Thaps4229;rank=3 chr4 . exon 521230 521950 . + . ID=Thaps4229.3;Parent=Thaps4229;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 533901 534492 . - . ID=Thaps18841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1B0];external_name=Thaps18841;logic_name=jgi_thaps3 chr4 ensembl transcript 533901 534492 . - . ID=Thaps18841;Parent=Thaps18841;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 533901 533996 . - 0 ID=Thaps18841;Parent=Thaps18841;rank=3 chr4 . exon 533901 533996 . - . ID=Thaps18841.3;Parent=Thaps18841;constitutive=1;rank=3 chr4 . CDS 534067 534188 . - 0 ID=Thaps18841;Parent=Thaps18841;rank=2 chr4 . exon 534067 534188 . - . ID=Thaps18841.2;Parent=Thaps18841;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 534333 534492 . - 0 ID=Thaps18841;Parent=Thaps18841;rank=1 chr4 . exon 534333 534492 . - . ID=Thaps18841.1;Parent=Thaps18841;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 529087 530034 . + . ID=Thaps22148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1A7];external_name=Thaps22148;logic_name=jgi_thaps3 chr4 ensembl transcript 529087 530034 . + . ID=Thaps22148;Parent=Thaps22148;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 529087 530034 . + 0 ID=Thaps22148;Parent=Thaps22148;rank=1 chr4 . exon 529087 530034 . + . ID=Thaps22148.1;Parent=Thaps22148;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 530173 532229 . - . ID=Thaps22149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1A8];external_name=Thaps22149;logic_name=jgi_thaps3 chr4 ensembl transcript 530173 532229 . - . ID=Thaps22149;Parent=Thaps22149;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 530173 531208 . - 0 ID=Thaps22149;Parent=Thaps22149;rank=3 chr4 . exon 530173 531208 . - . ID=Thaps22149.3;Parent=Thaps22149;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 531254 532091 . - 0 ID=Thaps22149;Parent=Thaps22149;rank=2 chr4 . exon 531254 532091 . - . ID=Thaps22149.2;Parent=Thaps22149;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 532130 532229 . - 0 ID=Thaps22149;Parent=Thaps22149;rank=1 chr4 . exon 532130 532229 . - . ID=Thaps22149.1;Parent=Thaps22149;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 532563 533768 . + . ID=Thaps22150;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1A9];external_name=Thaps22150;logic_name=jgi_thaps3 chr4 ensembl transcript 532563 533768 . + . ID=Thaps22150;Parent=Thaps22150;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 532563 533768 . + 0 ID=Thaps22150;Parent=Thaps22150;rank=1 chr4 . exon 532563 533768 . + . ID=Thaps22150.1;Parent=Thaps22150;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 537984 538899 . - . ID=Thaps33603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1B2];external_name=Thaps33603;logic_name=jgi_thaps3 chr4 ensembl transcript 537984 538899 . - . ID=Thaps33603;Parent=Thaps33603;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 537984 538237 . - 0 ID=Thaps33603;Parent=Thaps33603;rank=3 chr4 . exon 537984 538237 . - . ID=Thaps33603.3;Parent=Thaps33603;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 538320 538621 . - 0 ID=Thaps33603;Parent=Thaps33603;rank=2 chr4 . exon 538320 538621 . - . ID=Thaps33603.2;Parent=Thaps33603;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 538718 538899 . - 0 ID=Thaps33603;Parent=Thaps33603;rank=1 chr4 ensembl protein_coding_gene 536432 537824 . + . ID=Thaps4237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1B1];external_name=Thaps4237;logic_name=jgi_thaps3 chr4 ensembl transcript 536432 537824 . + . ID=Thaps4237;Parent=Thaps4237;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 536432 536489 . + 0 ID=Thaps4237;Parent=Thaps4237;rank=1 chr4 . exon 536432 536489 . + . ID=Thaps4237.1;Parent=Thaps4237;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 536566 536882 . + 0 ID=Thaps4237;Parent=Thaps4237;rank=2 chr4 . exon 536566 536882 . + . ID=Thaps4237.2;Parent=Thaps4237;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 537033 537538 . + 0 ID=Thaps4237;Parent=Thaps4237;rank=3 chr4 . exon 537033 537538 . + . ID=Thaps4237.3;Parent=Thaps4237;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 537641 537824 . + 0 ID=Thaps4237;Parent=Thaps4237;rank=4 chr4 . exon 537641 537824 . + . ID=Thaps4237.4;Parent=Thaps4237;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . repeat_region 539484 539511 . ? . description=dust chr4 . repeat_region 539662 539686 . ? . description=dust chr4 . repeat_region 547151 547158 . ? . description=dust chr4 ensembl protein_coding_gene 545864 546490 . + . ID=Thaps17865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1B5];external_name=Thaps17865;logic_name=jgi_thaps3 chr4 ensembl transcript 545864 546490 . + . ID=Thaps17865;Parent=Thaps17865;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 545864 546490 . + 0 ID=Thaps17865;Parent=Thaps17865;rank=1 chr4 . exon 545864 546490 . + . ID=Thaps17865.1;Parent=Thaps17865;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 547144 547491 . - . ID=Thaps18462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1B6];external_name=Thaps18462;logic_name=jgi_thaps3 chr4 ensembl transcript 547144 547491 . - . ID=Thaps18462;Parent=Thaps18462;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 547144 547491 . - 0 ID=Thaps18462;Parent=Thaps18462;rank=1 chr4 . exon 547144 547491 . - . ID=Thaps18462.1;Parent=Thaps18462;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 542969 544944 . - . ID=Thaps22153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1B4];external_name=Thaps22153;logic_name=jgi_thaps3 chr4 ensembl transcript 542969 544944 . - . ID=Thaps22153;Parent=Thaps22153;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 542969 543007 . - 0 ID=Thaps22153;Parent=Thaps22153;rank=3 chr4 . exon 542969 543007 . - . ID=Thaps22153.3;Parent=Thaps22153;constitutive=1;rank=3 chr4 . CDS 543092 544735 . - 0 ID=Thaps22153;Parent=Thaps22153;rank=2 chr4 . exon 543092 544735 . - . ID=Thaps22153.2;Parent=Thaps22153;constitutive=1;rank=2 chr4 . CDS 544843 544944 . - 0 ID=Thaps22153;Parent=Thaps22153;rank=1 chr4 . exon 544843 544944 . - . ID=Thaps22153.1;Parent=Thaps22153;constitutive=1;rank=1 chr4 . exon 538718 538899 . - . ID=Thaps33603.1;Parent=Thaps33603;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 540910 542819 . + . ID=Thaps40223;biotype=protein_coding;description=GMP synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C1B3];external_name=Thaps40223;logic_name=jgi_thaps3 chr4 ensembl transcript 540910 542819 . + . ID=Thaps40223;Parent=Thaps40223;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 540910 540965 . + 0 ID=Thaps40223;Parent=Thaps40223;rank=1 chr4 . exon 540910 540965 . + . ID=Thaps40223.1;Parent=Thaps40223;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 541077 541338 . + 0 ID=Thaps40223;Parent=Thaps40223;rank=2 chr4 . exon 541077 541338 . + . ID=Thaps40223.2;Parent=Thaps40223;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 541423 541606 . + 0 ID=Thaps40223;Parent=Thaps40223;rank=3 chr4 . exon 541423 541606 . + . ID=Thaps40223.3;Parent=Thaps40223;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 541702 542819 . + 0 ID=Thaps40223;Parent=Thaps40223;rank=4 chr4 . exon 541702 542819 . + . ID=Thaps40223.4;Parent=Thaps40223;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 550580 551822 . - . ID=Thaps22155;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1B8];external_name=Thaps22155;logic_name=jgi_thaps3 chr4 ensembl transcript 550580 551822 . - . ID=Thaps22155;Parent=Thaps22155;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 550580 550618 . - 0 ID=Thaps22155;Parent=Thaps22155;rank=3 chr4 . exon 550580 550618 . - . ID=Thaps22155.3;Parent=Thaps22155;constitutive=1;rank=3 chr4 . CDS 550695 551406 . - 0 ID=Thaps22155;Parent=Thaps22155;rank=2 chr4 . exon 550695 551406 . - . ID=Thaps22155.2;Parent=Thaps22155;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 551500 551822 . - 0 ID=Thaps22155;Parent=Thaps22155;rank=1 chr4 . exon 551500 551822 . - . ID=Thaps22155.1;Parent=Thaps22155;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 554432 555392 . + . ID=Thaps262088;biotype=protein_coding;description=Adenylate cyclase [Source:UniProtKB/TrEMBL%3BAcc:B8C1B9];external_name=Thaps262088;logic_name=jgi_thaps3 chr4 ensembl transcript 554432 555392 . + . ID=Thaps262088;Parent=Thaps262088;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 554432 554501 . + 0 ID=Thaps262088;Parent=Thaps262088;rank=1 chr4 . exon 554432 554501 . + . ID=Thaps262088.1;Parent=Thaps262088;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 554595 555392 . + 0 ID=Thaps262088;Parent=Thaps262088;rank=2 chr4 . exon 554595 555392 . + . ID=Thaps262088.2;Parent=Thaps262088;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 555536 556876 . - . ID=Thaps268640;biotype=protein_coding;description=Mannosyloligosaccharid alpha-mannosidase [Source:UniProtKB/TrEMBL%3BAcc:B8C1C0];external_name=Thaps268640;logic_name=jgi_thaps3 chr4 ensembl transcript 555536 556876 . - . ID=Thaps268640;Parent=Thaps268640;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 555536 556876 . - 0 ID=Thaps268640;Parent=Thaps268640;rank=1 chr4 . exon 555536 556876 . - . ID=Thaps268640.1;Parent=Thaps268640;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 557600 559026 . - . ID=Thaps40232;biotype=protein_coding;description=Mannosyl-oligosaccharide 1%2C2-alpha-mannosidase [Source:UniProtKB/TrEMBL%3BAcc:B8C1C1];external_name=OAM1;logic_name=jgi_thaps3 chr4 ensembl transcript 557600 559026 . - . ID=Thaps40232;Parent=Thaps40232;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 557600 558498 . - 0 ID=Thaps40232;Parent=Thaps40232;rank=2 chr4 . exon 557600 558498 . - . ID=Thaps40232.2;Parent=Thaps40232;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 558588 559026 . - 0 ID=Thaps40232;Parent=Thaps40232;rank=1 chr4 ensembl protein_coding_gene 548496 550311 . + . ID=Thaps4243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1B7];external_name=Thaps4243;logic_name=jgi_thaps3 chr4 ensembl transcript 548496 550311 . + . ID=Thaps4243;Parent=Thaps4243;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 548496 549109 . + 0 ID=Thaps4243;Parent=Thaps4243;rank=1 chr4 . exon 548496 549109 . + . ID=Thaps4243.1;Parent=Thaps4243;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 549195 549505 . + 0 ID=Thaps4243;Parent=Thaps4243;rank=2 chr4 . exon 549195 549505 . + . ID=Thaps4243.2;Parent=Thaps4243;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 549596 550311 . + 0 ID=Thaps4243;Parent=Thaps4243;rank=3 chr4 . exon 549596 550311 . + . ID=Thaps4243.3;Parent=Thaps4243;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . repeat_region 560460 560477 . ? . description=dust chr4 ensembl protein_coding_gene 560534 563664 . + . ID=Thaps262091;biotype=protein_coding;description=Eukaryotic translation initiation factor 3%2C subunit 10 [Source:UniProtKB/TrEMBL%3BAcc:B8C1C2];external_name=Thaps262091;logic_name=jgi_thaps3 chr4 ensembl transcript 560534 563664 . + . ID=Thaps262091;Parent=Thaps262091;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 560534 560804 . + 0 ID=Thaps262091;Parent=Thaps262091;rank=1 chr4 . exon 560534 560804 . + . ID=Thaps262091.1;Parent=Thaps262091;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 560832 560896 . + 0 ID=Thaps262091;Parent=Thaps262091;rank=2 chr4 . exon 560832 560896 . + . ID=Thaps262091.2;Parent=Thaps262091;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 560927 561226 . + 0 ID=Thaps262091;Parent=Thaps262091;rank=3 chr4 . exon 560927 561226 . + . ID=Thaps262091.3;Parent=Thaps262091;constitutive=1;rank=3 chr4 . CDS 561367 561520 . + 0 ID=Thaps262091;Parent=Thaps262091;rank=4 chr4 . exon 561367 561520 . + . ID=Thaps262091.4;Parent=Thaps262091;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 561539 561777 . + 0 ID=Thaps262091;Parent=Thaps262091;rank=5 chr4 . exon 561539 561777 . + . ID=Thaps262091.5;Parent=Thaps262091;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 561811 562708 . + 0 ID=Thaps262091;Parent=Thaps262091;rank=6 chr4 . exon 561811 562708 . + . ID=Thaps262091.6;Parent=Thaps262091;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 562800 563311 . + 0 ID=Thaps262091;Parent=Thaps262091;rank=7 chr4 . exon 562800 563311 . + . ID=Thaps262091.7;Parent=Thaps262091;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . CDS 563386 563664 . + 0 ID=Thaps262091;Parent=Thaps262091;rank=8 chr4 . exon 563386 563664 . + . ID=Thaps262091.8;Parent=Thaps262091;constitutive=1;rank=8 chr4 . exon 558588 559026 . - . ID=Thaps40232.1;Parent=Thaps40232;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 567180 567710 . - . ID=Thaps40233;biotype=protein_coding;description=Cold-shock DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1C4];external_name=Thaps40233;logic_name=jgi_thaps3 chr4 ensembl transcript 567180 567710 . - . ID=Thaps40233;Parent=Thaps40233;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 567180 567342 . - 0 ID=Thaps40233;Parent=Thaps40233;rank=2 chr4 . exon 567180 567342 . - . ID=Thaps40233.2;Parent=Thaps40233;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 567463 567710 . - 0 ID=Thaps40233;Parent=Thaps40233;rank=1 chr4 . exon 567463 567710 . - . ID=Thaps40233.1;Parent=Thaps40233;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 563905 565136 . - . ID=Thaps4249;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1C3];external_name=Thaps4249;logic_name=jgi_thaps3 chr4 ensembl transcript 563905 565136 . - . ID=Thaps4249;Parent=Thaps4249;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 563905 564776 . - 0 ID=Thaps4249;Parent=Thaps4249;rank=2 chr4 . exon 563905 564776 . - . ID=Thaps4249.2;Parent=Thaps4249;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 564881 565136 . - 0 ID=Thaps4249;Parent=Thaps4249;rank=1 chr4 . exon 564881 565136 . - . ID=Thaps4249.1;Parent=Thaps4249;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 573492 573534 . ? . description=trf chr4 ensembl protein_coding_gene 574182 578676 . + . ID=Thaps22162;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1C6];external_name=Thaps22162;logic_name=jgi_thaps3 chr4 ensembl transcript 574182 578676 . + . ID=Thaps22162;Parent=Thaps22162;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 574182 575638 . + 0 ID=Thaps22162;Parent=Thaps22162;rank=1 chr4 . exon 574182 575638 . + . ID=Thaps22162.1;Parent=Thaps22162;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 575762 578027 . + 0 ID=Thaps22162;Parent=Thaps22162;rank=2 chr4 . exon 575762 578027 . + . ID=Thaps22162.2;Parent=Thaps22162;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 578110 578676 . + 0 ID=Thaps22162;Parent=Thaps22162;rank=3 chr4 . exon 578110 578676 . + . ID=Thaps22162.3;Parent=Thaps22162;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 570914 573311 . - . ID=Thaps268644;biotype=protein_coding;description=Polyribonucleotide nucleotidyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C1C5];external_name=Thaps268644;logic_name=jgi_thaps3 chr4 ensembl transcript 570914 573311 . - . ID=Thaps268644;Parent=Thaps268644;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 570914 571104 . - 0 ID=Thaps268644;Parent=Thaps268644;rank=4 chr4 . exon 570914 571104 . - . ID=Thaps268644.4;Parent=Thaps268644;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 571191 571407 . - 0 ID=Thaps268644;Parent=Thaps268644;rank=3 chr4 . exon 571191 571407 . - . ID=Thaps268644.3;Parent=Thaps268644;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 571474 572104 . - 0 ID=Thaps268644;Parent=Thaps268644;rank=2 chr4 . exon 571474 572104 . - . ID=Thaps268644.2;Parent=Thaps268644;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 572185 573311 . - 0 ID=Thaps268644;Parent=Thaps268644;rank=1 chr4 . exon 572185 573311 . - . ID=Thaps268644.1;Parent=Thaps268644;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . repeat_region 582767 582798 . ? . description=dust chr4 ensembl protein_coding_gene 582142 582816 . + . ID=Thaps22163;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1C9];external_name=Thaps22163;logic_name=jgi_thaps3 chr4 ensembl transcript 582142 582816 . + . ID=Thaps22163;Parent=Thaps22163;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 582142 582816 . + 0 ID=Thaps22163;Parent=Thaps22163;rank=1 chr4 . exon 582142 582816 . + . ID=Thaps22163.1;Parent=Thaps22163;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 584365 585828 . - . ID=Thaps26191;biotype=protein_coding;description=Asparaginyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C1D1];external_name=Thaps26191;logic_name=jgi_thaps3 chr4 ensembl transcript 584365 585828 . - . ID=Thaps26191;Parent=Thaps26191;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 584365 585828 . - 0 ID=Thaps26191;Parent=Thaps26191;rank=1 chr4 . exon 584365 585828 . - . ID=Thaps26191.1;Parent=Thaps26191;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 578847 579623 . + . ID=Thaps4253;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1C7];external_name=Thaps4253;logic_name=jgi_thaps3 chr4 ensembl transcript 578847 579623 . + . ID=Thaps4253;Parent=Thaps4253;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 578847 579623 . + 0 ID=Thaps4253;Parent=Thaps4253;rank=1 chr4 . exon 578847 579623 . + . ID=Thaps4253.1;Parent=Thaps4253;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 579687 581708 . - . ID=Thaps4254;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1C8];external_name=Thaps4254;logic_name=jgi_thaps3 chr4 ensembl transcript 579687 581708 . - . ID=Thaps4254;Parent=Thaps4254;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 579687 580278 . - 0 ID=Thaps4254;Parent=Thaps4254;rank=3 chr4 . exon 579687 580278 . - . ID=Thaps4254.3;Parent=Thaps4254;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 580374 580915 . - 0 ID=Thaps4254;Parent=Thaps4254;rank=2 chr4 . exon 580374 580915 . - . ID=Thaps4254.2;Parent=Thaps4254;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 581277 581708 . - 0 ID=Thaps4254;Parent=Thaps4254;rank=1 chr4 . exon 581277 581708 . - . ID=Thaps4254.1;Parent=Thaps4254;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 583232 584212 . - . ID=Thaps4256;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1D0];external_name=Thaps4256;logic_name=jgi_thaps3 chr4 ensembl transcript 583232 584212 . - . ID=Thaps4256;Parent=Thaps4256;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 583232 584212 . - 0 ID=Thaps4256;Parent=Thaps4256;rank=1 chr4 . exon 583232 584212 . - . ID=Thaps4256.1;Parent=Thaps4256;constitutive=1;rank=1 chr4 . repeat_region 589002 589025 . ? . description=trf chr4 . repeat_region 590931 590962 . ? . description=trf chr4 . repeat_region 596190 596210 . ? . description=trf chr4 ensembl protein_coding_gene 596698 597692 . + . ID=Thaps22166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1D5];external_name=Thaps22166;logic_name=jgi_thaps3 chr4 ensembl transcript 596698 597692 . + . ID=Thaps22166;Parent=Thaps22166;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 596698 597492 . + 0 ID=Thaps22166;Parent=Thaps22166;rank=1 chr4 . exon 596698 597492 . + . ID=Thaps22166.1;Parent=Thaps22166;constitutive=1;rank=1 chr4 . CDS 597582 597692 . + 0 ID=Thaps22166;Parent=Thaps22166;rank=2 chr4 . exon 597582 597692 . + . ID=Thaps22166.2;Parent=Thaps22166;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 588324 588686 . - . ID=Thaps33995;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1D2];external_name=Thaps33995;logic_name=jgi_thaps3 chr4 ensembl transcript 588324 588686 . - . ID=Thaps33995;Parent=Thaps33995;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 588324 588686 . - 0 ID=Thaps33995;Parent=Thaps33995;rank=1 chr4 . exon 588324 588686 . - . ID=Thaps33995.1;Parent=Thaps33995;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 589107 590607 . + . ID=Thaps4260;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1D3];external_name=Thaps4260;logic_name=jgi_thaps3 chr4 ensembl transcript 589107 590607 . + . ID=Thaps4260;Parent=Thaps4260;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 589107 589109 . + 0 ID=Thaps4260;Parent=Thaps4260;rank=1 chr4 . exon 589107 589109 . + . ID=Thaps4260.1;Parent=Thaps4260;constitutive=1;rank=1 chr4 . CDS 589395 589539 . + 0 ID=Thaps4260;Parent=Thaps4260;rank=2 chr4 . exon 589395 589539 . + . ID=Thaps4260.2;Parent=Thaps4260;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 589675 589953 . + 0 ID=Thaps4260;Parent=Thaps4260;rank=3 chr4 . exon 589675 589953 . + . ID=Thaps4260.3;Parent=Thaps4260;constitutive=1;rank=3 chr4 . CDS 590051 590607 . + 0 ID=Thaps4260;Parent=Thaps4260;rank=4 chr4 . exon 590051 590607 . + . ID=Thaps4260.4;Parent=Thaps4260;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 591955 596259 . - . ID=Thaps4261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1D4];external_name=Thaps4261;logic_name=jgi_thaps3 chr4 ensembl transcript 591955 596259 . - . ID=Thaps4261;Parent=Thaps4261;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 591955 596259 . - 0 ID=Thaps4261;Parent=Thaps4261;rank=1 chr4 . exon 591955 596259 . - . ID=Thaps4261.1;Parent=Thaps4261;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 597948 599222 . + . ID=Thaps4263;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1D6];external_name=Thaps4263;logic_name=jgi_thaps3 chr4 ensembl transcript 597948 599222 . + . ID=Thaps4263;Parent=Thaps4263;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 597948 599222 . + 0 ID=Thaps4263;Parent=Thaps4263;rank=1 chr4 . exon 597948 599222 . + . ID=Thaps4263.1;Parent=Thaps4263;constitutive=1;rank=1 chr4 . repeat_region 604021 604045 . ? . description=dust chr4 ensembl protein_coding_gene 601887 604124 . - . ID=Thaps22167;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1D8];external_name=Thaps22167;logic_name=jgi_thaps3 chr4 ensembl transcript 601887 604124 . - . ID=Thaps22167;Parent=Thaps22167;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 601887 603290 . - 0 ID=Thaps22167;Parent=Thaps22167;rank=4 chr4 . exon 601887 603290 . - . ID=Thaps22167.4;Parent=Thaps22167;constitutive=1;rank=4 chr4 . CDS 603375 603491 . - 0 ID=Thaps22167;Parent=Thaps22167;rank=3 chr4 . exon 603375 603491 . - . ID=Thaps22167.3;Parent=Thaps22167;constitutive=1;rank=3 chr4 . CDS 603582 603906 . - 0 ID=Thaps22167;Parent=Thaps22167;rank=2 chr4 . exon 603582 603906 . - . ID=Thaps22167.2;Parent=Thaps22167;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 604063 604124 . - 0 ID=Thaps22167;Parent=Thaps22167;rank=1 chr4 . exon 604063 604124 . - . ID=Thaps22167.1;Parent=Thaps22167;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 604668 608551 . + . ID=Thaps22168;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1D9];external_name=Thaps22168;logic_name=jgi_thaps3 chr4 ensembl transcript 604668 608551 . + . ID=Thaps22168;Parent=Thaps22168;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 604668 606247 . + 0 ID=Thaps22168;Parent=Thaps22168;rank=1 chr4 . exon 604668 606247 . + . ID=Thaps22168.1;Parent=Thaps22168;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 606284 606921 . + 0 ID=Thaps22168;Parent=Thaps22168;rank=2 chr4 . exon 606284 606921 . + . ID=Thaps22168.2;Parent=Thaps22168;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 607027 607820 . + 0 ID=Thaps22168;Parent=Thaps22168;rank=3 chr4 . exon 607027 607820 . + . ID=Thaps22168.3;Parent=Thaps22168;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 607906 608160 . + 0 ID=Thaps22168;Parent=Thaps22168;rank=4 chr4 . exon 607906 608160 . + . ID=Thaps22168.4;Parent=Thaps22168;constitutive=1;rank=4 chr4 . CDS 608249 608551 . + 0 ID=Thaps22168;Parent=Thaps22168;rank=5 chr4 ensembl protein_coding_gene 599775 600641 . + . ID=Thaps4264;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1D7];external_name=Thaps4264;logic_name=jgi_thaps3 chr4 ensembl transcript 599775 600641 . + . ID=Thaps4264;Parent=Thaps4264;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 599775 600641 . + 0 ID=Thaps4264;Parent=Thaps4264;rank=1 chr4 . exon 599775 600641 . + . ID=Thaps4264.1;Parent=Thaps4264;constitutive=1;rank=1 chr4 . exon 608249 608551 . + . ID=Thaps22168.5;Parent=Thaps22168;constitutive=1;rank=5 chr4 ensembl protein_coding_gene 611801 613392 . + . ID=Thaps26192;biotype=protein_coding;description=Glutamate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C1E2];external_name=GDH_2;logic_name=jgi_thaps3 chr4 ensembl transcript 611801 613392 . + . ID=Thaps26192;Parent=Thaps26192;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 611801 612625 . + 0 ID=Thaps26192;Parent=Thaps26192;rank=1 chr4 . exon 611801 612625 . + . ID=Thaps26192.1;Parent=Thaps26192;constitutive=1;rank=1 chr4 . CDS 612703 613392 . + 0 ID=Thaps26192;Parent=Thaps26192;rank=2 chr4 . exon 612703 613392 . + . ID=Thaps26192.2;Parent=Thaps26192;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 617562 619831 . + . ID=Thaps262099;biotype=protein_coding;description=Alanine racemase [Source:UniProtKB/TrEMBL%3BAcc:B8C1E5];external_name=Thaps262099;logic_name=jgi_thaps3 chr4 ensembl transcript 617562 619831 . + . ID=Thaps262099;Parent=Thaps262099;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 617562 617799 . + 0 ID=Thaps262099;Parent=Thaps262099;rank=1 chr4 . exon 617562 617799 . + . ID=Thaps262099.1;Parent=Thaps262099;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 617938 618002 . + 0 ID=Thaps262099;Parent=Thaps262099;rank=2 chr4 . exon 617938 618002 . + . ID=Thaps262099.2;Parent=Thaps262099;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 618070 618101 . + 0 ID=Thaps262099;Parent=Thaps262099;rank=3 chr4 . exon 618070 618101 . + . ID=Thaps262099.3;Parent=Thaps262099;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 618697 618726 . + 0 ID=Thaps262099;Parent=Thaps262099;rank=4 chr4 . CDS 618818 618929 . + 0 ID=Thaps262099;Parent=Thaps262099;rank=5 chr4 . CDS 619131 619321 . + 0 ID=Thaps262099;Parent=Thaps262099;rank=6 chr4 . CDS 619337 619831 . + 0 ID=Thaps262099;Parent=Thaps262099;rank=7 chr4 ensembl protein_coding_gene 608580 609483 . - . ID=Thaps4267;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1E0];external_name=Thaps4267;logic_name=jgi_thaps3 chr4 ensembl transcript 608580 609483 . - . ID=Thaps4267;Parent=Thaps4267;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 608580 608923 . - 0 ID=Thaps4267;Parent=Thaps4267;rank=2 chr4 . exon 608580 608923 . - . ID=Thaps4267.2;Parent=Thaps4267;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 609000 609483 . - 0 ID=Thaps4267;Parent=Thaps4267;rank=1 chr4 . exon 609000 609483 . - . ID=Thaps4267.1;Parent=Thaps4267;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 609769 611484 . - . ID=Thaps4268;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1E1];external_name=Thaps4268;logic_name=jgi_thaps3 chr4 ensembl transcript 609769 611484 . - . ID=Thaps4268;Parent=Thaps4268;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 609769 609789 . - 0 ID=Thaps4268;Parent=Thaps4268;rank=3 chr4 . exon 609769 609789 . - . ID=Thaps4268.3;Parent=Thaps4268;constitutive=1;rank=3 chr4 . CDS 610054 610880 . - 0 ID=Thaps4268;Parent=Thaps4268;rank=2 chr4 . exon 610054 610880 . - . ID=Thaps4268.2;Parent=Thaps4268;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 611355 611484 . - 0 ID=Thaps4268;Parent=Thaps4268;rank=1 chr4 . exon 611355 611484 . - . ID=Thaps4268.1;Parent=Thaps4268;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 613631 614143 . - . ID=Thaps4270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1E3];external_name=Thaps4270;logic_name=jgi_thaps3 chr4 ensembl transcript 613631 614143 . - . ID=Thaps4270;Parent=Thaps4270;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 613631 614143 . - 0 ID=Thaps4270;Parent=Thaps4270;rank=1 chr4 . exon 613631 614143 . - . ID=Thaps4270.1;Parent=Thaps4270;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 614884 615966 . + . ID=Thaps4271;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1E4];external_name=Thaps4271;logic_name=jgi_thaps3 chr4 ensembl transcript 614884 615966 . + . ID=Thaps4271;Parent=Thaps4271;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 614884 615966 . + 0 ID=Thaps4271;Parent=Thaps4271;rank=1 chr4 . exon 614884 615966 . + . ID=Thaps4271.1;Parent=Thaps4271;constitutive=1;rank=1 chr4 . repeat_region 622926 622951 . ? . description=dust chr4 . repeat_region 622929 622951 . ? . description=trf chr4 ensembl protein_coding_gene 620365 622045 . - . ID=Thaps22170;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1E6];external_name=Thaps22170;logic_name=jgi_thaps3 chr4 ensembl transcript 620365 622045 . - . ID=Thaps22170;Parent=Thaps22170;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 620365 620372 . - 0 ID=Thaps22170;Parent=Thaps22170;rank=3 chr4 . exon 620365 620372 . - . ID=Thaps22170.3;Parent=Thaps22170;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 620503 621082 . - 0 ID=Thaps22170;Parent=Thaps22170;rank=2 chr4 . exon 620503 621082 . - . ID=Thaps22170.2;Parent=Thaps22170;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 621254 622045 . - 0 ID=Thaps22170;Parent=Thaps22170;rank=1 chr4 . exon 621254 622045 . - . ID=Thaps22170.1;Parent=Thaps22170;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 622336 623554 . + . ID=Thaps22171;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1E7];external_name=Thaps22171;logic_name=jgi_thaps3 chr4 ensembl transcript 622336 623554 . + . ID=Thaps22171;Parent=Thaps22171;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 622336 622381 . + 0 ID=Thaps22171;Parent=Thaps22171;rank=1 chr4 . exon 622336 622381 . + . ID=Thaps22171.1;Parent=Thaps22171;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 622531 622601 . + 0 ID=Thaps22171;Parent=Thaps22171;rank=2 chr4 . exon 622531 622601 . + . ID=Thaps22171.2;Parent=Thaps22171;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 622777 622856 . + 0 ID=Thaps22171;Parent=Thaps22171;rank=3 chr4 . exon 622777 622856 . + . ID=Thaps22171.3;Parent=Thaps22171;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 622954 623554 . + 0 ID=Thaps22171;Parent=Thaps22171;rank=4 chr4 . exon 622954 623554 . + . ID=Thaps22171.4;Parent=Thaps22171;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . exon 618697 618726 . + . ID=Thaps262099.4;Parent=Thaps262099;constitutive=1;rank=4 chr4 . exon 618818 618929 . + . ID=Thaps262099.5;Parent=Thaps262099;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . exon 619131 619321 . + . ID=Thaps262099.6;Parent=Thaps262099;constitutive=1;ensembl_end_phase=2;rank=6 chr4 . exon 619337 619831 . + . ID=Thaps262099.7;Parent=Thaps262099;constitutive=1;rank=7 chr4 ensembl protein_coding_gene 623712 625217 . - . ID=Thaps27811;biotype=protein_coding;description=Aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C1E8];external_name=Thaps27811;logic_name=jgi_thaps3 chr4 ensembl transcript 623712 625217 . - . ID=Thaps27811;Parent=Thaps27811;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 623712 624130 . - 0 ID=Thaps27811;Parent=Thaps27811;rank=5 chr4 . exon 623712 624130 . - . ID=Thaps27811.5;Parent=Thaps27811;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 624203 624237 . - 0 ID=Thaps27811;Parent=Thaps27811;rank=4 chr4 . exon 624203 624237 . - . ID=Thaps27811.4;Parent=Thaps27811;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 624324 624450 . - 0 ID=Thaps27811;Parent=Thaps27811;rank=3 chr4 . exon 624324 624450 . - . ID=Thaps27811.3;Parent=Thaps27811;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 624515 624970 . - 0 ID=Thaps27811;Parent=Thaps27811;rank=2 chr4 . exon 624515 624970 . - . ID=Thaps27811.2;Parent=Thaps27811;constitutive=1;rank=2 chr4 . CDS 625076 625217 . - 0 ID=Thaps27811;Parent=Thaps27811;rank=1 chr4 . exon 625076 625217 . - . ID=Thaps27811.1;Parent=Thaps27811;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 625601 626440 . - . ID=Thaps4276;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1E9];external_name=Thaps4276;logic_name=jgi_thaps3 chr4 ensembl transcript 625601 626440 . - . ID=Thaps4276;Parent=Thaps4276;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 625601 626440 . - 0 ID=Thaps4276;Parent=Thaps4276;rank=1 chr4 . exon 625601 626440 . - . ID=Thaps4276.1;Parent=Thaps4276;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 626895 629432 . - . ID=Thaps4277;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1F0];external_name=Thaps4277;logic_name=jgi_thaps3 chr4 ensembl transcript 626895 629432 . - . ID=Thaps4277;Parent=Thaps4277;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 626895 629432 . - 0 ID=Thaps4277;Parent=Thaps4277;rank=1 chr4 . exon 626895 629432 . - . ID=Thaps4277.1;Parent=Thaps4277;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 632378 633682 . + . ID=Thaps14597;biotype=protein_coding;description=Atp-depedent helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C1F2];external_name=Thaps14597;logic_name=jgi_thaps3 chr4 ensembl transcript 632378 633682 . + . ID=Thaps14597;Parent=Thaps14597;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 632378 633682 . + 0 ID=Thaps14597;Parent=Thaps14597;rank=1 chr4 . exon 632378 633682 . + . ID=Thaps14597.1;Parent=Thaps14597;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 636463 636954 . + . ID=Thaps33676;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1F3];external_name=Thaps33676;logic_name=jgi_thaps3 chr4 ensembl transcript 636463 636954 . + . ID=Thaps33676;Parent=Thaps33676;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 636463 636954 . + 0 ID=Thaps33676;Parent=Thaps33676;rank=1 chr4 . exon 636463 636954 . + . ID=Thaps33676.1;Parent=Thaps33676;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 630648 631361 . - . ID=Thaps4278;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1F1];external_name=Thaps4278;logic_name=jgi_thaps3 chr4 ensembl transcript 630648 631361 . - . ID=Thaps4278;Parent=Thaps4278;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 630648 630861 . - 0 ID=Thaps4278;Parent=Thaps4278;rank=3 chr4 . exon 630648 630861 . - . ID=Thaps4278.3;Parent=Thaps4278;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 630950 631188 . - 0 ID=Thaps4278;Parent=Thaps4278;rank=2 chr4 . exon 630950 631188 . - . ID=Thaps4278.2;Parent=Thaps4278;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 631275 631361 . - 0 ID=Thaps4278;Parent=Thaps4278;rank=1 chr4 . exon 631275 631361 . - . ID=Thaps4278.1;Parent=Thaps4278;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 637428 639056 . + . ID=Thaps4282;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1F4];external_name=Thaps4282;logic_name=jgi_thaps3 chr4 ensembl transcript 637428 639056 . + . ID=Thaps4282;Parent=Thaps4282;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 637428 638308 . + 0 ID=Thaps4282;Parent=Thaps4282;rank=1 chr4 . exon 637428 638308 . + . ID=Thaps4282.1;Parent=Thaps4282;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 638329 638448 . + 0 ID=Thaps4282;Parent=Thaps4282;rank=2 chr4 . CDS 638528 639056 . + 0 ID=Thaps4282;Parent=Thaps4282;rank=3 chr4 ensembl protein_coding_gene 639310 641814 . - . ID=Thaps262102;biotype=protein_coding;description=Kinesin motor subunit-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1F5];external_name=Thaps262102;logic_name=jgi_thaps3 chr4 ensembl transcript 639310 641814 . - . ID=Thaps262102;Parent=Thaps262102;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 639310 639801 . - 0 ID=Thaps262102;Parent=Thaps262102;rank=4 chr4 . exon 639310 639801 . - . ID=Thaps262102.4;Parent=Thaps262102;constitutive=1;rank=4 chr4 . CDS 639934 640168 . - 0 ID=Thaps262102;Parent=Thaps262102;rank=3 chr4 . exon 639934 640168 . - . ID=Thaps262102.3;Parent=Thaps262102;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 640442 640782 . - 0 ID=Thaps262102;Parent=Thaps262102;rank=2 chr4 . exon 640442 640782 . - . ID=Thaps262102.2;Parent=Thaps262102;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 640849 641814 . - 0 ID=Thaps262102;Parent=Thaps262102;rank=1 chr4 . exon 640849 641814 . - . ID=Thaps262102.1;Parent=Thaps262102;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 643048 643807 . - . ID=Thaps262103;biotype=protein_coding;description=PIP2 phosphodiesterase [Source:UniProtKB/TrEMBL%3BAcc:B8C1F6];external_name=Thaps262103;logic_name=jgi_thaps3 chr4 ensembl transcript 643048 643807 . - . ID=Thaps262103;Parent=Thaps262103;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 643048 643807 . - 0 ID=Thaps262103;Parent=Thaps262103;rank=1 chr4 . exon 643048 643807 . - . ID=Thaps262103.1;Parent=Thaps262103;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 645865 646388 . - . ID=Thaps262104;biotype=protein_coding;description=PIP2 phosphodiesterase [Source:UniProtKB/TrEMBL%3BAcc:B8C1F7];external_name=Thaps262104;logic_name=jgi_thaps3 chr4 ensembl transcript 645865 646388 . - . ID=Thaps262104;Parent=Thaps262104;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 645865 646125 . - 0 ID=Thaps262104;Parent=Thaps262104;rank=2 chr4 . exon 645865 646125 . - . ID=Thaps262104.2;Parent=Thaps262104;constitutive=1;rank=2 chr4 . CDS 646174 646388 . - 0 ID=Thaps262104;Parent=Thaps262104;rank=1 chr4 . exon 646174 646388 . - . ID=Thaps262104.1;Parent=Thaps262104;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . exon 638329 638448 . + . ID=Thaps4282.2;Parent=Thaps4282;constitutive=1;rank=2 chr4 . exon 638528 639056 . + . ID=Thaps4282.3;Parent=Thaps4282;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . repeat_region 655277 655284 . ? . description=dust chr4 ensembl protein_coding_gene 651700 653580 . - . ID=Thaps12859;biotype=protein_coding;description=Ribonuclease [Source:UniProtKB/TrEMBL%3BAcc:B8C1F9];external_name=Thaps12859;logic_name=jgi_thaps3 chr4 ensembl transcript 651700 653580 . - . ID=Thaps12859;Parent=Thaps12859;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 651700 652384 . - 0 ID=Thaps12859;Parent=Thaps12859;rank=2 chr4 . exon 651700 652384 . - . ID=Thaps12859.2;Parent=Thaps12859;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 652466 653580 . - 0 ID=Thaps12859;Parent=Thaps12859;rank=1 chr4 . exon 652466 653580 . - . ID=Thaps12859.1;Parent=Thaps12859;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 649343 651341 . + . ID=Thaps27813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1F8];external_name=Thaps27813;logic_name=jgi_thaps3 chr4 ensembl transcript 649343 651341 . + . ID=Thaps27813;Parent=Thaps27813;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 649343 649394 . + 0 ID=Thaps27813;Parent=Thaps27813;rank=1 chr4 . exon 649343 649394 . + . ID=Thaps27813.1;Parent=Thaps27813;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 649572 649874 . + 0 ID=Thaps27813;Parent=Thaps27813;rank=2 chr4 . exon 649572 649874 . + . ID=Thaps27813.2;Parent=Thaps27813;constitutive=1;rank=2 chr4 . CDS 649926 650494 . + 0 ID=Thaps27813;Parent=Thaps27813;rank=3 chr4 . exon 649926 650494 . + . ID=Thaps27813.3;Parent=Thaps27813;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 650580 651341 . + 0 ID=Thaps27813;Parent=Thaps27813;rank=4 chr4 . exon 650580 651341 . + . ID=Thaps27813.4;Parent=Thaps27813;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 655155 657955 . + . ID=Thaps4287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1G0];external_name=Thaps4287;logic_name=jgi_thaps3 chr4 ensembl transcript 655155 657955 . + . ID=Thaps4287;Parent=Thaps4287;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 655155 656309 . + 0 ID=Thaps4287;Parent=Thaps4287;rank=1 chr4 . exon 655155 656309 . + . ID=Thaps4287.1;Parent=Thaps4287;constitutive=1;rank=1 chr4 . CDS 656389 657226 . + 0 ID=Thaps4287;Parent=Thaps4287;rank=2 chr4 . exon 656389 657226 . + . ID=Thaps4287.2;Parent=Thaps4287;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 657254 657548 . + 0 ID=Thaps4287;Parent=Thaps4287;rank=3 chr4 . exon 657254 657548 . + . ID=Thaps4287.3;Parent=Thaps4287;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 657628 657955 . + 0 ID=Thaps4287;Parent=Thaps4287;rank=4 chr4 . exon 657628 657955 . + . ID=Thaps4287.4;Parent=Thaps4287;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . repeat_region 661566 661595 . ? . description=trf chr4 . repeat_region 664162 664181 . ? . description=trf chr4 ensembl protein_coding_gene 665544 666734 . - . ID=Thaps22177;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1G2];external_name=Thaps22177;logic_name=jgi_thaps3 chr4 ensembl transcript 665544 666734 . - . ID=Thaps22177;Parent=Thaps22177;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 665544 666734 . - 0 ID=Thaps22177;Parent=Thaps22177;rank=1 chr4 . exon 665544 666734 . - . ID=Thaps22177.1;Parent=Thaps22177;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 658006 664409 . - . ID=Thaps4288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1G1];external_name=Thaps4288;logic_name=jgi_thaps3 chr4 ensembl transcript 658006 664409 . - . ID=Thaps4288;Parent=Thaps4288;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 658006 659070 . - 0 ID=Thaps4288;Parent=Thaps4288;rank=4 chr4 . exon 658006 659070 . - . ID=Thaps4288.4;Parent=Thaps4288;constitutive=1;rank=4 chr4 . CDS 659124 659868 . - 0 ID=Thaps4288;Parent=Thaps4288;rank=3 chr4 . exon 659124 659868 . - . ID=Thaps4288.3;Parent=Thaps4288;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 659943 660546 . - 0 ID=Thaps4288;Parent=Thaps4288;rank=2 chr4 . exon 659943 660546 . - . ID=Thaps4288.2;Parent=Thaps4288;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 660617 664409 . - 0 ID=Thaps4288;Parent=Thaps4288;rank=1 chr4 . exon 660617 664409 . - . ID=Thaps4288.1;Parent=Thaps4288;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 667178 668420 . + . ID=Thaps4290;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1G3];external_name=Thaps4290;logic_name=jgi_thaps3 chr4 ensembl transcript 667178 668420 . + . ID=Thaps4290;Parent=Thaps4290;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 667178 668254 . + 0 ID=Thaps4290;Parent=Thaps4290;rank=1 chr4 . exon 667178 668254 . + . ID=Thaps4290.1;Parent=Thaps4290;constitutive=1;rank=1 chr4 . CDS 668319 668420 . + 0 ID=Thaps4290;Parent=Thaps4290;rank=2 chr4 ensembl protein_coding_gene 668534 671095 . - . ID=Thaps268650;biotype=protein_coding;description=Beta subunit of clathrin adaptor complex AP2 [Source:UniProtKB/TrEMBL%3BAcc:B8C1G4];external_name=APB2;logic_name=jgi_thaps3 chr4 ensembl transcript 668534 671095 . - . ID=Thaps268650;Parent=Thaps268650;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 668534 671095 . - 0 ID=Thaps268650;Parent=Thaps268650;rank=1 chr4 . exon 668534 671095 . - . ID=Thaps268650.1;Parent=Thaps268650;constitutive=1;rank=1 chr4 . exon 668319 668420 . + . ID=Thaps4290.2;Parent=Thaps4290;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 671744 672523 . + . ID=Thaps4292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1G5];external_name=Thaps4292;logic_name=jgi_thaps3 chr4 ensembl transcript 671744 672523 . + . ID=Thaps4292;Parent=Thaps4292;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 671744 672523 . + 0 ID=Thaps4292;Parent=Thaps4292;rank=1 chr4 . exon 671744 672523 . + . ID=Thaps4292.1;Parent=Thaps4292;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 673256 674623 . - . ID=Thaps4293;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1G6];external_name=Thaps4293;logic_name=jgi_thaps3 chr4 ensembl transcript 673256 674623 . - . ID=Thaps4293;Parent=Thaps4293;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 673256 674623 . - 0 ID=Thaps4293;Parent=Thaps4293;rank=1 chr4 . exon 673256 674623 . - . ID=Thaps4293.1;Parent=Thaps4293;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 674995 676748 . + . ID=Thaps4294;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1G7];external_name=Thaps4294;logic_name=jgi_thaps3 chr4 ensembl transcript 674995 676748 . + . ID=Thaps4294;Parent=Thaps4294;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 674995 675103 . + 0 ID=Thaps4294;Parent=Thaps4294;rank=1 chr4 . exon 674995 675103 . + . ID=Thaps4294.1;Parent=Thaps4294;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 675323 676155 . + 0 ID=Thaps4294;Parent=Thaps4294;rank=2 chr4 . exon 675323 676155 . + . ID=Thaps4294.2;Parent=Thaps4294;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 676476 676748 . + 0 ID=Thaps4294;Parent=Thaps4294;rank=3 chr4 . exon 676476 676748 . + . ID=Thaps4294.3;Parent=Thaps4294;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 677106 678698 . - . ID=Thaps4295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1G8];external_name=Thaps4295;logic_name=jgi_thaps3 chr4 ensembl transcript 677106 678698 . - . ID=Thaps4295;Parent=Thaps4295;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 677106 678698 . - 0 ID=Thaps4295;Parent=Thaps4295;rank=1 chr4 . exon 677106 678698 . - . ID=Thaps4295.1;Parent=Thaps4295;constitutive=1;rank=1 chr4 . repeat_region 686452 686508 . ? . description=dust chr4 . repeat_region 687289 687318 . ? . description=dust chr4 ensembl protein_coding_gene 683459 684304 . + . ID=Thaps22180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1H1];external_name=Thaps22180;logic_name=jgi_thaps3 chr4 ensembl transcript 683459 684304 . + . ID=Thaps22180;Parent=Thaps22180;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 683459 684304 . + 0 ID=Thaps22180;Parent=Thaps22180;rank=1 chr4 . exon 683459 684304 . + . ID=Thaps22180.1;Parent=Thaps22180;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 684984 685556 . - . ID=Thaps268651;biotype=protein_coding;description=RS9%2C ribosomal protein 9 [Source:UniProtKB/TrEMBL%3BAcc:B8C1H2];external_name=RS9;logic_name=jgi_thaps3 chr4 ensembl transcript 684984 685556 . - . ID=Thaps268651;Parent=Thaps268651;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 684984 685556 . - 0 ID=Thaps268651;Parent=Thaps268651;rank=1 chr4 . exon 684984 685556 . - . ID=Thaps268651.1;Parent=Thaps268651;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 682538 683108 . - . ID=Thaps33667;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1H0];external_name=Thaps33667;logic_name=jgi_thaps3 chr4 ensembl transcript 682538 683108 . - . ID=Thaps33667;Parent=Thaps33667;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 682538 682689 . - 0 ID=Thaps33667;Parent=Thaps33667;rank=2 chr4 . exon 682538 682689 . - . ID=Thaps33667.2;Parent=Thaps33667;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 682826 683108 . - 0 ID=Thaps33667;Parent=Thaps33667;rank=1 chr4 . exon 682826 683108 . - . ID=Thaps33667.1;Parent=Thaps33667;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 680819 682054 . + . ID=Thaps4296;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1G9];external_name=Thaps4296;logic_name=jgi_thaps3 chr4 ensembl transcript 680819 682054 . + . ID=Thaps4296;Parent=Thaps4296;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 680819 682054 . + 0 ID=Thaps4296;Parent=Thaps4296;rank=1 chr4 . exon 680819 682054 . + . ID=Thaps4296.1;Parent=Thaps4296;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 687564 688958 . + . ID=Thaps4300;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1H3];external_name=Thaps4300;logic_name=jgi_thaps3 chr4 ensembl transcript 687564 688958 . + . ID=Thaps4300;Parent=Thaps4300;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 687564 688958 . + 0 ID=Thaps4300;Parent=Thaps4300;rank=1 chr4 . exon 687564 688958 . + . ID=Thaps4300.1;Parent=Thaps4300;constitutive=1;rank=1 chr4 . repeat_region 691948 691977 . ? . description=trf chr4 ensembl protein_coding_gene 691599 695143 . + . ID=Thaps22183;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1H5];external_name=Thaps22183;logic_name=jgi_thaps3 chr4 ensembl transcript 691599 695143 . + . ID=Thaps22183;Parent=Thaps22183;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 691599 693221 . + 0 ID=Thaps22183;Parent=Thaps22183;rank=1 chr4 . exon 691599 693221 . + . ID=Thaps22183.1;Parent=Thaps22183;constitutive=1;rank=1 chr4 . CDS 693299 693637 . + 0 ID=Thaps22183;Parent=Thaps22183;rank=2 chr4 . exon 693299 693637 . + . ID=Thaps22183.2;Parent=Thaps22183;constitutive=1;rank=2 chr4 . CDS 693699 694374 . + 0 ID=Thaps22183;Parent=Thaps22183;rank=3 chr4 . exon 693699 694374 . + . ID=Thaps22183.3;Parent=Thaps22183;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 694507 695047 . + 0 ID=Thaps22183;Parent=Thaps22183;rank=4 chr4 . exon 694507 695047 . + . ID=Thaps22183.4;Parent=Thaps22183;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 695131 695143 . + 0 ID=Thaps22183;Parent=Thaps22183;rank=5 chr4 . exon 695131 695143 . + . ID=Thaps22183.5;Parent=Thaps22183;constitutive=1;ensembl_end_phase=1;rank=5 chr4 ensembl protein_coding_gene 696377 699298 . + . ID=Thaps22184;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1H7];external_name=Thaps22184;logic_name=jgi_thaps3 chr4 ensembl transcript 696377 699298 . + . ID=Thaps22184;Parent=Thaps22184;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 696377 699298 . + 0 ID=Thaps22184;Parent=Thaps22184;rank=1 chr4 . exon 696377 699298 . + . ID=Thaps22184.1;Parent=Thaps22184;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 690248 690436 . - . ID=Thaps27822;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1H4];external_name=Thaps27822;logic_name=jgi_thaps3 chr4 ensembl transcript 690248 690436 . - . ID=Thaps27822;Parent=Thaps27822;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 690248 690436 . - 0 ID=Thaps27822;Parent=Thaps27822;rank=1 chr4 . exon 690248 690436 . - . ID=Thaps27822.1;Parent=Thaps27822;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 695363 696089 . - . ID=Thaps4302;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1H6];external_name=Thaps4302;logic_name=jgi_thaps3 chr4 ensembl transcript 695363 696089 . - . ID=Thaps4302;Parent=Thaps4302;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 695363 695850 . - 0 ID=Thaps4302;Parent=Thaps4302;rank=2 chr4 . exon 695363 695850 . - . ID=Thaps4302.2;Parent=Thaps4302;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 695963 696089 . - 0 ID=Thaps4302;Parent=Thaps4302;rank=1 chr4 . exon 695963 696089 . - . ID=Thaps4302.1;Parent=Thaps4302;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 699407 699416 . ? . description=dust chr4 ensembl protein_coding_gene 699546 704237 . + . ID=Thaps22185;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1H8];external_name=Thaps22185;logic_name=jgi_thaps3 chr4 ensembl transcript 699546 704237 . + . ID=Thaps22185;Parent=Thaps22185;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 699546 704237 . + 0 ID=Thaps22185;Parent=Thaps22185;rank=1 chr4 . exon 699546 704237 . + . ID=Thaps22185.1;Parent=Thaps22185;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 705365 707768 . + . ID=Thaps33979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1H9];external_name=Thaps33979;logic_name=jgi_thaps3 chr4 ensembl transcript 705365 707768 . + . ID=Thaps33979;Parent=Thaps33979;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 705365 705520 . + 0 ID=Thaps33979;Parent=Thaps33979;rank=1 chr4 . exon 705365 705520 . + . ID=Thaps33979.1;Parent=Thaps33979;constitutive=1;rank=1 chr4 . CDS 705650 706251 . + 0 ID=Thaps33979;Parent=Thaps33979;rank=2 chr4 . exon 705650 706251 . + . ID=Thaps33979.2;Parent=Thaps33979;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 706346 706665 . + 0 ID=Thaps33979;Parent=Thaps33979;rank=3 chr4 . exon 706346 706665 . + . ID=Thaps33979.3;Parent=Thaps33979;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 707080 707152 . + 0 ID=Thaps33979;Parent=Thaps33979;rank=4 chr4 . exon 707080 707152 . + . ID=Thaps33979.4;Parent=Thaps33979;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 707231 707768 . + 0 ID=Thaps33979;Parent=Thaps33979;rank=5 chr4 . exon 707231 707768 . + . ID=Thaps33979.5;Parent=Thaps33979;constitutive=1;ensembl_end_phase=1;rank=5 chr4 ensembl protein_coding_gene 709941 710738 . - . ID=Thaps22186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I1];external_name=Thaps22186;logic_name=jgi_thaps3 chr4 ensembl transcript 709941 710738 . - . ID=Thaps22186;Parent=Thaps22186;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 709941 710738 . - 0 ID=Thaps22186;Parent=Thaps22186;rank=1 chr4 . exon 709941 710738 . - . ID=Thaps22186.1;Parent=Thaps22186;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 715350 716060 . + . ID=Thaps268652;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I3];external_name=Thaps268652;logic_name=jgi_thaps3 chr4 ensembl transcript 715350 716060 . + . ID=Thaps268652;Parent=Thaps268652;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 715350 716060 . + 0 ID=Thaps268652;Parent=Thaps268652;rank=1 chr4 . exon 715350 716060 . + . ID=Thaps268652.1;Parent=Thaps268652;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 709107 709739 . + . ID=Thaps4306;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I0];external_name=Thaps4306;logic_name=jgi_thaps3 chr4 ensembl transcript 709107 709739 . + . ID=Thaps4306;Parent=Thaps4306;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 709107 709739 . + 0 ID=Thaps4306;Parent=Thaps4306;rank=1 chr4 . exon 709107 709739 . + . ID=Thaps4306.1;Parent=Thaps4306;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 711139 712552 . + . ID=Thaps4308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I2];external_name=Thaps4308;logic_name=jgi_thaps3 chr4 ensembl transcript 711139 712552 . + . ID=Thaps4308;Parent=Thaps4308;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 711139 711266 . + 0 ID=Thaps4308;Parent=Thaps4308;rank=1 chr4 . exon 711139 711266 . + . ID=Thaps4308.1;Parent=Thaps4308;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 711691 711866 . + 0 ID=Thaps4308;Parent=Thaps4308;rank=2 chr4 . exon 711691 711866 . + . ID=Thaps4308.2;Parent=Thaps4308;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 711915 712552 . + 0 ID=Thaps4308;Parent=Thaps4308;rank=3 chr4 . exon 711915 712552 . + . ID=Thaps4308.3;Parent=Thaps4308;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . repeat_region 718193 718248 . ? . description=trf chr4 . repeat_region 719815 719824 . ? . description=dust chr4 ensembl protein_coding_gene 718659 719510 . - . ID=Thaps22187;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I4];external_name=Thaps22187;logic_name=jgi_thaps3 chr4 ensembl transcript 718659 719510 . - . ID=Thaps22187;Parent=Thaps22187;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 718659 719510 . - 0 ID=Thaps22187;Parent=Thaps22187;rank=1 chr4 . exon 718659 719510 . - . ID=Thaps22187.1;Parent=Thaps22187;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 726222 726566 . + . ID=Thaps262112;biotype=protein_coding;description=Ankyrin repeat-rich vertebrate like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I6];external_name=Thaps262112;logic_name=jgi_thaps3 chr4 ensembl transcript 726222 726566 . + . ID=Thaps262112;Parent=Thaps262112;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 726222 726566 . + 0 ID=Thaps262112;Parent=Thaps262112;rank=1 chr4 . exon 726222 726566 . + . ID=Thaps262112.1;Parent=Thaps262112;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 720135 722504 . + . ID=Thaps268653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I5];external_name=Thaps268653;logic_name=jgi_thaps3 chr4 ensembl transcript 720135 722504 . + . ID=Thaps268653;Parent=Thaps268653;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 720135 722504 . + 0 ID=Thaps268653;Parent=Thaps268653;rank=1 chr4 . exon 720135 722504 . + . ID=Thaps268653.1;Parent=Thaps268653;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 726944 727216 . + . ID=Thaps33437;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I7];external_name=Thaps33437;logic_name=jgi_thaps3 chr4 ensembl transcript 726944 727216 . + . ID=Thaps33437;Parent=Thaps33437;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 726944 727216 . + 0 ID=Thaps33437;Parent=Thaps33437;rank=1 chr4 . exon 726944 727216 . + . ID=Thaps33437.1;Parent=Thaps33437;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 727648 728714 . - . ID=Thaps4312;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I8];external_name=Thaps4312;logic_name=jgi_thaps3 chr4 ensembl transcript 727648 728714 . - . ID=Thaps4312;Parent=Thaps4312;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 727648 728107 . - 0 ID=Thaps4312;Parent=Thaps4312;rank=2 chr4 . exon 727648 728107 . - . ID=Thaps4312.2;Parent=Thaps4312;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 728278 728714 . - 0 ID=Thaps4312;Parent=Thaps4312;rank=1 chr4 ensembl protein_coding_gene 729223 732460 . - . ID=Thaps22189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1I9];external_name=Thaps22189;logic_name=jgi_thaps3 chr4 ensembl transcript 729223 732460 . - . ID=Thaps22189;Parent=Thaps22189;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 729223 729326 . - 0 ID=Thaps22189;Parent=Thaps22189;rank=5 chr4 . exon 729223 729326 . - . ID=Thaps22189.5;Parent=Thaps22189;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 729429 729932 . - 0 ID=Thaps22189;Parent=Thaps22189;rank=4 chr4 . exon 729429 729932 . - . ID=Thaps22189.4;Parent=Thaps22189;constitutive=1;rank=4 chr4 . CDS 730095 730780 . - 0 ID=Thaps22189;Parent=Thaps22189;rank=3 chr4 . exon 730095 730780 . - . ID=Thaps22189.3;Parent=Thaps22189;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 731048 732205 . - 0 ID=Thaps22189;Parent=Thaps22189;rank=2 chr4 . exon 731048 732205 . - . ID=Thaps22189.2;Parent=Thaps22189;constitutive=1;rank=2 chr4 . CDS 732285 732460 . - 0 ID=Thaps22189;Parent=Thaps22189;rank=1 chr4 . exon 732285 732460 . - . ID=Thaps22189.1;Parent=Thaps22189;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 733842 737503 . + . ID=Thaps33859;biotype=protein_coding;description=NNT NAD transhydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8C1J0];external_name=Thaps33859;logic_name=jgi_thaps3 chr4 ensembl transcript 733842 737503 . + . ID=Thaps33859;Parent=Thaps33859;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 733842 733977 . + 0 ID=Thaps33859;Parent=Thaps33859;rank=1 chr4 . exon 733842 733977 . + . ID=Thaps33859.1;Parent=Thaps33859;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 734081 734529 . + 0 ID=Thaps33859;Parent=Thaps33859;rank=2 chr4 . exon 734081 734529 . + . ID=Thaps33859.2;Parent=Thaps33859;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 734615 734737 . + 0 ID=Thaps33859;Parent=Thaps33859;rank=3 chr4 . exon 734615 734737 . + . ID=Thaps33859.3;Parent=Thaps33859;constitutive=1;rank=3 chr4 . CDS 734809 734962 . + 0 ID=Thaps33859;Parent=Thaps33859;rank=4 chr4 . exon 734809 734962 . + . ID=Thaps33859.4;Parent=Thaps33859;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 735049 735327 . + 0 ID=Thaps33859;Parent=Thaps33859;rank=5 chr4 . exon 735049 735327 . + . ID=Thaps33859.5;Parent=Thaps33859;constitutive=1;rank=5 chr4 . CDS 735420 736043 . + 0 ID=Thaps33859;Parent=Thaps33859;rank=6 chr4 . exon 735420 736043 . + . ID=Thaps33859.6;Parent=Thaps33859;constitutive=1;rank=6 chr4 . CDS 736125 737503 . + 0 ID=Thaps33859;Parent=Thaps33859;rank=7 chr4 . exon 736125 737503 . + . ID=Thaps33859.7;Parent=Thaps33859;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . exon 728278 728714 . - . ID=Thaps4312.1;Parent=Thaps4312;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 737669 738905 . - . ID=Thaps4315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1J1];external_name=Thaps4315;logic_name=jgi_thaps3 chr4 ensembl transcript 737669 738905 . - . ID=Thaps4315;Parent=Thaps4315;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 737669 737771 . - 0 ID=Thaps4315;Parent=Thaps4315;rank=7 chr4 . exon 737669 737771 . - . ID=Thaps4315.7;Parent=Thaps4315;constitutive=1;ensembl_end_phase=1;rank=7 chr4 . CDS 737792 738019 . - 0 ID=Thaps4315;Parent=Thaps4315;rank=6 chr4 . CDS 738105 738262 . - 0 ID=Thaps4315;Parent=Thaps4315;rank=5 chr4 . CDS 738324 738348 . - 0 ID=Thaps4315;Parent=Thaps4315;rank=4 chr4 . CDS 738426 738506 . - 0 ID=Thaps4315;Parent=Thaps4315;rank=3 chr4 . CDS 738584 738629 . - 0 ID=Thaps4315;Parent=Thaps4315;rank=2 chr4 . CDS 738710 738905 . - 0 ID=Thaps4315;Parent=Thaps4315;rank=1 chr4 . repeat_region 737716 737742 . ? . description=trf chr4 . repeat_region 738757 738764 . ? . description=dust chr4 . repeat_region 742732 742739 . ? . description=dust chr4 . repeat_region 745228 745307 . ? . description=trf chr4 ensembl protein_coding_gene 745683 747263 . - . ID=Thaps22192;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1J5];external_name=Thaps22192;logic_name=jgi_thaps3 chr4 ensembl transcript 745683 747263 . - . ID=Thaps22192;Parent=Thaps22192;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 745683 746738 . - 0 ID=Thaps22192;Parent=Thaps22192;rank=2 chr4 . exon 745683 746738 . - . ID=Thaps22192.2;Parent=Thaps22192;constitutive=1;rank=2 chr4 . CDS 746982 747263 . - 0 ID=Thaps22192;Parent=Thaps22192;rank=1 chr4 . exon 746982 747263 . - . ID=Thaps22192.1;Parent=Thaps22192;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 740813 743431 . - . ID=Thaps268655;biotype=protein_coding;description=Histone deacetylase 1 HDAC Hda1p [Source:UniProtKB/TrEMBL%3BAcc:B8C1J3];external_name=Thaps268655;logic_name=jgi_thaps3 chr4 ensembl transcript 740813 743431 . - . ID=Thaps268655;Parent=Thaps268655;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 740813 741122 . - 0 ID=Thaps268655;Parent=Thaps268655;rank=6 chr4 . exon 740813 741122 . - . ID=Thaps268655.6;Parent=Thaps268655;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 741225 741478 . - 0 ID=Thaps268655;Parent=Thaps268655;rank=5 chr4 . exon 741225 741478 . - . ID=Thaps268655.5;Parent=Thaps268655;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 741668 741727 . - 0 ID=Thaps268655;Parent=Thaps268655;rank=4 chr4 . exon 741668 741727 . - . ID=Thaps268655.4;Parent=Thaps268655;constitutive=1;rank=4 chr4 . CDS 741821 742260 . - 0 ID=Thaps268655;Parent=Thaps268655;rank=3 chr4 . exon 741821 742260 . - . ID=Thaps268655.3;Parent=Thaps268655;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 742489 743168 . - 0 ID=Thaps268655;Parent=Thaps268655;rank=2 chr4 . exon 742489 743168 . - . ID=Thaps268655.2;Parent=Thaps268655;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 743262 743431 . - 0 ID=Thaps268655;Parent=Thaps268655;rank=1 chr4 . exon 743262 743431 . - . ID=Thaps268655.1;Parent=Thaps268655;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 739944 740687 . + . ID=Thaps33312;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1J2];external_name=Thaps33312;logic_name=jgi_thaps3 chr4 ensembl transcript 739944 740687 . + . ID=Thaps33312;Parent=Thaps33312;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 739944 740687 . + 0 ID=Thaps33312;Parent=Thaps33312;rank=1 chr4 . exon 739944 740687 . + . ID=Thaps33312.1;Parent=Thaps33312;constitutive=1;rank=1 chr4 . exon 737792 738019 . - . ID=Thaps4315.6;Parent=Thaps4315;constitutive=1;rank=6 chr4 . exon 738105 738262 . - . ID=Thaps4315.5;Parent=Thaps4315;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . exon 738324 738348 . - . ID=Thaps4315.4;Parent=Thaps4315;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . exon 738426 738506 . - . ID=Thaps4315.3;Parent=Thaps4315;constitutive=1;rank=3 chr4 . exon 738584 738629 . - . ID=Thaps4315.2;Parent=Thaps4315;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 738710 738905 . - . ID=Thaps4315.1;Parent=Thaps4315;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 744275 745165 . + . ID=Thaps4318;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1J4];external_name=Thaps4318;logic_name=jgi_thaps3 chr4 ensembl transcript 744275 745165 . + . ID=Thaps4318;Parent=Thaps4318;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 744275 745165 . + 0 ID=Thaps4318;Parent=Thaps4318;rank=1 chr4 . exon 744275 745165 . + . ID=Thaps4318.1;Parent=Thaps4318;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 747515 751169 . + . ID=Thaps4320;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1J6];external_name=Thaps4320;logic_name=jgi_thaps3 chr4 ensembl transcript 747515 751169 . + . ID=Thaps4320;Parent=Thaps4320;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 747515 749272 . + 0 ID=Thaps4320;Parent=Thaps4320;rank=1 chr4 . exon 747515 749272 . + . ID=Thaps4320.1;Parent=Thaps4320;constitutive=1;rank=1 chr4 . CDS 749364 749564 . + 0 ID=Thaps4320;Parent=Thaps4320;rank=2 chr4 . CDS 749813 749978 . + 0 ID=Thaps4320;Parent=Thaps4320;rank=3 chr4 . CDS 749998 751169 . + 0 ID=Thaps4320;Parent=Thaps4320;rank=4 chr4 ensembl protein_coding_gene 757583 758719 . + . ID=Thaps262116;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K0];external_name=Thaps262116;logic_name=jgi_thaps3 chr4 ensembl transcript 757583 758719 . + . ID=Thaps262116;Parent=Thaps262116;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 757583 757799 . + 0 ID=Thaps262116;Parent=Thaps262116;rank=1 chr4 . exon 757583 757799 . + . ID=Thaps262116.1;Parent=Thaps262116;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 757821 758719 . + 0 ID=Thaps262116;Parent=Thaps262116;rank=2 chr4 . exon 749364 749564 . + . ID=Thaps4320.2;Parent=Thaps4320;constitutive=1;rank=2 chr4 . exon 749813 749978 . + . ID=Thaps4320.3;Parent=Thaps4320;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . exon 749998 751169 . + . ID=Thaps4320.4;Parent=Thaps4320;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 751482 752637 . + . ID=Thaps4321;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1J7];external_name=Thaps4321;logic_name=jgi_thaps3 chr4 ensembl transcript 751482 752637 . + . ID=Thaps4321;Parent=Thaps4321;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 751482 751586 . + 0 ID=Thaps4321;Parent=Thaps4321;rank=1 chr4 . exon 751482 751586 . + . ID=Thaps4321.1;Parent=Thaps4321;constitutive=1;rank=1 chr4 . CDS 752011 752637 . + 0 ID=Thaps4321;Parent=Thaps4321;rank=2 chr4 . exon 752011 752637 . + . ID=Thaps4321.2;Parent=Thaps4321;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 752839 755882 . + . ID=Thaps4322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1J8];external_name=Thaps4322;logic_name=jgi_thaps3 chr4 ensembl transcript 752839 755882 . + . ID=Thaps4322;Parent=Thaps4322;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 752839 754555 . + 0 ID=Thaps4322;Parent=Thaps4322;rank=1 chr4 . exon 752839 754555 . + . ID=Thaps4322.1;Parent=Thaps4322;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 754663 755087 . + 0 ID=Thaps4322;Parent=Thaps4322;rank=2 chr4 . exon 754663 755087 . + . ID=Thaps4322.2;Parent=Thaps4322;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 755214 755504 . + 0 ID=Thaps4322;Parent=Thaps4322;rank=3 chr4 . exon 755214 755504 . + . ID=Thaps4322.3;Parent=Thaps4322;constitutive=1;rank=3 chr4 . CDS 755583 755882 . + 0 ID=Thaps4322;Parent=Thaps4322;rank=4 chr4 . exon 755583 755882 . + . ID=Thaps4322.4;Parent=Thaps4322;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 756087 757002 . - . ID=Thaps4323;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1J9];external_name=Thaps4323;logic_name=jgi_thaps3 chr4 ensembl transcript 756087 757002 . - . ID=Thaps4323;Parent=Thaps4323;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 756087 756137 . - 0 ID=Thaps4323;Parent=Thaps4323;rank=2 chr4 . exon 756087 756137 . - . ID=Thaps4323.2;Parent=Thaps4323;constitutive=1;rank=2 chr4 . CDS 756196 757002 . - 0 ID=Thaps4323;Parent=Thaps4323;rank=1 chr4 . exon 756196 757002 . - . ID=Thaps4323.1;Parent=Thaps4323;constitutive=1;rank=1 chr4 . repeat_region 761421 761433 . ? . description=dust chr4 . repeat_region 763633 763668 . ? . description=trf chr4 . repeat_region 764553 764614 . ? . description=dust chr4 . exon 757821 758719 . + . ID=Thaps262116.2;Parent=Thaps262116;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 761580 763067 . - . ID=Thaps268657;biotype=protein_coding;description=Probable SOLUBLE pyridine nucleotide transhydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BYY9];external_name=Thaps268657;logic_name=jgi_thaps3 chr4 ensembl transcript 761580 763067 . - . ID=Thaps268657;Parent=Thaps268657;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 761580 762023 . - 0 ID=Thaps268657;Parent=Thaps268657;rank=2 chr4 . exon 761580 762023 . - . ID=Thaps268657.2;Parent=Thaps268657;constitutive=1;rank=2 chr4 . CDS 762111 763067 . - 0 ID=Thaps268657;Parent=Thaps268657;rank=1 chr4 . exon 762111 763067 . - . ID=Thaps268657.1;Parent=Thaps268657;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 764957 766818 . - . ID=Thaps33389;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ1];external_name=Thaps33389;logic_name=jgi_thaps3 chr4 ensembl transcript 764957 766818 . - . ID=Thaps33389;Parent=Thaps33389;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 764957 765268 . - 0 ID=Thaps33389;Parent=Thaps33389;rank=3 chr4 . exon 764957 765268 . - . ID=Thaps33389.3;Parent=Thaps33389;constitutive=1;rank=3 chr4 . CDS 765360 766619 . - 0 ID=Thaps33389;Parent=Thaps33389;rank=2 chr4 . exon 765360 766619 . - . ID=Thaps33389.2;Parent=Thaps33389;constitutive=1;rank=2 chr4 . CDS 766711 766818 . - 0 ID=Thaps33389;Parent=Thaps33389;rank=1 chr4 . exon 766711 766818 . - . ID=Thaps33389.1;Parent=Thaps33389;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 759734 760954 . - . ID=Thaps33794;biotype=protein_coding;description=Sterol delta7 reductase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C1K1];external_name=Thaps33794;logic_name=jgi_thaps3 chr4 ensembl transcript 759734 760954 . - . ID=Thaps33794;Parent=Thaps33794;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 759734 760681 . - 0 ID=Thaps33794;Parent=Thaps33794;rank=2 chr4 . exon 759734 760681 . - . ID=Thaps33794.2;Parent=Thaps33794;constitutive=1;rank=2 chr4 . CDS 760754 760954 . - 0 ID=Thaps33794;Parent=Thaps33794;rank=1 chr4 . exon 760754 760954 . - . ID=Thaps33794.1;Parent=Thaps33794;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 763718 764632 . + . ID=Thaps4326;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ0];external_name=Thaps4326;logic_name=jgi_thaps3 chr4 ensembl transcript 763718 764632 . + . ID=Thaps4326;Parent=Thaps4326;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 763718 763867 . + 0 ID=Thaps4326;Parent=Thaps4326;rank=1 chr4 . exon 763718 763867 . + . ID=Thaps4326.1;Parent=Thaps4326;constitutive=1;rank=1 chr4 . CDS 763975 764046 . + 0 ID=Thaps4326;Parent=Thaps4326;rank=2 chr4 . exon 763975 764046 . + . ID=Thaps4326.2;Parent=Thaps4326;constitutive=1;rank=2 chr4 . CDS 764219 764632 . + 0 ID=Thaps4326;Parent=Thaps4326;rank=3 chr4 . exon 764219 764632 . + . ID=Thaps4326.3;Parent=Thaps4326;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 773182 774149 . + . ID=Thaps22194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ5];external_name=Thaps22194;logic_name=jgi_thaps3 chr4 ensembl transcript 773182 774149 . + . ID=Thaps22194;Parent=Thaps22194;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 773182 773290 . + 0 ID=Thaps22194;Parent=Thaps22194;rank=1 chr4 . exon 773182 773290 . + . ID=Thaps22194.1;Parent=Thaps22194;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 773377 774149 . + 0 ID=Thaps22194;Parent=Thaps22194;rank=2 chr4 . exon 773377 774149 . + . ID=Thaps22194.2;Parent=Thaps22194;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 768150 768977 . - . ID=Thaps385;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ2];external_name=Thaps385;logic_name=jgi_thaps3 chr4 ensembl transcript 768150 768977 . - . ID=Thaps385;Parent=Thaps385;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 768150 768469 . - 0 ID=Thaps385;Parent=Thaps385;rank=2 chr4 . exon 768150 768469 . - . ID=Thaps385.2;Parent=Thaps385;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 768767 768977 . - 0 ID=Thaps385;Parent=Thaps385;rank=1 chr4 . exon 768767 768977 . - . ID=Thaps385.1;Parent=Thaps385;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 769228 769923 . + . ID=Thaps4330;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ3];external_name=Thaps4330;logic_name=jgi_thaps3 chr4 ensembl transcript 769228 769923 . + . ID=Thaps4330;Parent=Thaps4330;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 769228 769923 . + 0 ID=Thaps4330;Parent=Thaps4330;rank=1 chr4 . exon 769228 769923 . + . ID=Thaps4330.1;Parent=Thaps4330;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 771955 772903 . - . ID=Thaps4331;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ4];external_name=Thaps4331;logic_name=jgi_thaps3 chr4 ensembl transcript 771955 772903 . - . ID=Thaps4331;Parent=Thaps4331;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 771955 772237 . - 0 ID=Thaps4331;Parent=Thaps4331;rank=2 chr4 . exon 771955 772237 . - . ID=Thaps4331.2;Parent=Thaps4331;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 772386 772903 . - 0 ID=Thaps4331;Parent=Thaps4331;rank=1 chr4 . exon 772386 772903 . - . ID=Thaps4331.1;Parent=Thaps4331;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 774259 776496 . - . ID=Thaps4333;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ6];external_name=Thaps4333;logic_name=jgi_thaps3 chr4 ensembl transcript 774259 776496 . - . ID=Thaps4333;Parent=Thaps4333;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 774259 776496 . - 0 ID=Thaps4333;Parent=Thaps4333;rank=1 chr4 . exon 774259 776496 . - . ID=Thaps4333.1;Parent=Thaps4333;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 776851 778566 . + . ID=Thaps4334;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ7];external_name=Thaps4334;logic_name=jgi_thaps3 chr4 ensembl transcript 776851 778566 . + . ID=Thaps4334;Parent=Thaps4334;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 776851 778566 . + 0 ID=Thaps4334;Parent=Thaps4334;rank=1 chr4 . exon 776851 778566 . + . ID=Thaps4334.1;Parent=Thaps4334;constitutive=1;rank=1 chr4 . repeat_region 778264 778271 . ? . description=dust chr4 . repeat_region 781398 781436 . ? . description=trf chr4 ensembl protein_coding_gene 779508 780630 . - . ID=Thaps262120;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ8];external_name=Thaps262120;logic_name=jgi_thaps3 chr4 ensembl transcript 779508 780630 . - . ID=Thaps262120;Parent=Thaps262120;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 779508 779916 . - 0 ID=Thaps262120;Parent=Thaps262120;rank=4 chr4 . exon 779508 779916 . - . ID=Thaps262120.4;Parent=Thaps262120;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 779998 780226 . - 0 ID=Thaps262120;Parent=Thaps262120;rank=3 chr4 . exon 779998 780226 . - . ID=Thaps262120.3;Parent=Thaps262120;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 780315 780377 . - 0 ID=Thaps262120;Parent=Thaps262120;rank=2 chr4 . exon 780315 780377 . - . ID=Thaps262120.2;Parent=Thaps262120;constitutive=1;rank=2 chr4 . CDS 780396 780630 . - 0 ID=Thaps262120;Parent=Thaps262120;rank=1 chr4 . exon 780396 780630 . - . ID=Thaps262120.1;Parent=Thaps262120;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 784669 785481 . + . ID=Thaps33377;biotype=protein_coding;description=Putative uncharacterized protein cycB [Source:UniProtKB/TrEMBL%3BAcc:B8BZ00];external_name=CYCB;logic_name=jgi_thaps3 chr4 ensembl transcript 784669 785481 . + . ID=Thaps33377;Parent=Thaps33377;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 784669 785481 . + 0 ID=Thaps33377;Parent=Thaps33377;rank=1 chr4 . exon 784669 785481 . + . ID=Thaps33377.1;Parent=Thaps33377;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 782342 783934 . + . ID=Thaps4336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYZ9];external_name=Thaps4336;logic_name=jgi_thaps3 chr4 ensembl transcript 782342 783934 . + . ID=Thaps4336;Parent=Thaps4336;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 782342 783161 . + 0 ID=Thaps4336;Parent=Thaps4336;rank=1 chr4 . exon 782342 783161 . + . ID=Thaps4336.1;Parent=Thaps4336;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 783231 783934 . + 0 ID=Thaps4336;Parent=Thaps4336;rank=2 chr4 . exon 783231 783934 . + . ID=Thaps4336.2;Parent=Thaps4336;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 785708 787582 . - . ID=Thaps4338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ01];external_name=Thaps4338;logic_name=jgi_thaps3 chr4 ensembl transcript 785708 787582 . - . ID=Thaps4338;Parent=Thaps4338;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 785708 787582 . - 0 ID=Thaps4338;Parent=Thaps4338;rank=1 chr4 . exon 785708 787582 . - . ID=Thaps4338.1;Parent=Thaps4338;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 795965 797811 . + . ID=Thaps262125;biotype=protein_coding;description=Nitrite reductase-ferredoxin dependent [Source:UniProtKB/TrEMBL%3BAcc:B8BZ06];external_name=NIR_2;logic_name=jgi_thaps3 chr4 ensembl transcript 795965 797811 . + . ID=Thaps262125;Parent=Thaps262125;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 795965 796153 . + 0 ID=Thaps262125;Parent=Thaps262125;rank=1 chr4 . exon 795965 796153 . + . ID=Thaps262125.1;Parent=Thaps262125;constitutive=1;rank=1 chr4 . CDS 796267 797486 . + 0 ID=Thaps262125;Parent=Thaps262125;rank=2 chr4 . exon 796267 797486 . + . ID=Thaps262125.2;Parent=Thaps262125;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 797568 797631 . + 0 ID=Thaps262125;Parent=Thaps262125;rank=3 chr4 . CDS 797644 797811 . + 0 ID=Thaps262125;Parent=Thaps262125;rank=4 chr4 ensembl protein_coding_gene 789760 790693 . + . ID=Thaps33883;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ02];external_name=Thaps33883;logic_name=jgi_thaps3 chr4 ensembl transcript 789760 790693 . + . ID=Thaps33883;Parent=Thaps33883;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 789760 790191 . + 0 ID=Thaps33883;Parent=Thaps33883;rank=1 chr4 . exon 789760 790191 . + . ID=Thaps33883.1;Parent=Thaps33883;constitutive=1;rank=1 chr4 . CDS 790280 790693 . + 0 ID=Thaps33883;Parent=Thaps33883;rank=2 chr4 . exon 790280 790693 . + . ID=Thaps33883.2;Parent=Thaps33883;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 794025 794580 . - . ID=Thaps33968;biotype=protein_coding;description=Centrin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ05];external_name=CEN2;logic_name=jgi_thaps3 chr4 ensembl transcript 794025 794580 . - . ID=Thaps33968;Parent=Thaps33968;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 794025 794377 . - 0 ID=Thaps33968;Parent=Thaps33968;rank=2 chr4 . exon 794025 794377 . - . ID=Thaps33968.2;Parent=Thaps33968;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 794463 794580 . - 0 ID=Thaps33968;Parent=Thaps33968;rank=1 chr4 . exon 794463 794580 . - . ID=Thaps33968.1;Parent=Thaps33968;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 791144 792235 . - . ID=Thaps4340;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ03];external_name=Thaps4340;logic_name=jgi_thaps3 chr4 ensembl transcript 791144 792235 . - . ID=Thaps4340;Parent=Thaps4340;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 791144 792235 . - 0 ID=Thaps4340;Parent=Thaps4340;rank=1 chr4 . exon 791144 792235 . - . ID=Thaps4340.1;Parent=Thaps4340;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 792587 793902 . + . ID=Thaps4341;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ04];external_name=Thaps4341;logic_name=jgi_thaps3 chr4 ensembl transcript 792587 793902 . + . ID=Thaps4341;Parent=Thaps4341;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 792587 793902 . + 0 ID=Thaps4341;Parent=Thaps4341;rank=1 chr4 . exon 792587 793902 . + . ID=Thaps4341.1;Parent=Thaps4341;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 797987 799189 . - . ID=Thaps22197;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ07];external_name=Thaps22197;logic_name=jgi_thaps3 chr4 ensembl transcript 797987 799189 . - . ID=Thaps22197;Parent=Thaps22197;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 797987 798652 . - 0 ID=Thaps22197;Parent=Thaps22197;rank=3 chr4 . exon 797987 798652 . - . ID=Thaps22197.3;Parent=Thaps22197;constitutive=1;rank=3 chr4 . CDS 798755 798795 . - 0 ID=Thaps22197;Parent=Thaps22197;rank=2 chr4 . exon 798755 798795 . - . ID=Thaps22197.2;Parent=Thaps22197;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 798895 799189 . - 0 ID=Thaps22197;Parent=Thaps22197;rank=1 chr4 . exon 798895 799189 . - . ID=Thaps22197.1;Parent=Thaps22197;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 799507 799908 . + . ID=Thaps22198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ08];external_name=Thaps22198;logic_name=jgi_thaps3 chr4 ensembl transcript 799507 799908 . + . ID=Thaps22198;Parent=Thaps22198;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 799507 799908 . + 0 ID=Thaps22198;Parent=Thaps22198;rank=1 chr4 . exon 799507 799908 . + . ID=Thaps22198.1;Parent=Thaps22198;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 800972 801709 . + . ID=Thaps22199;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ09];external_name=Thaps22199;logic_name=jgi_thaps3 chr4 ensembl transcript 800972 801709 . + . ID=Thaps22199;Parent=Thaps22199;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 800972 801709 . + 0 ID=Thaps22199;Parent=Thaps22199;rank=1 chr4 . exon 800972 801709 . + . ID=Thaps22199.1;Parent=Thaps22199;constitutive=1;rank=1 chr4 . exon 797568 797631 . + . ID=Thaps262125.3;Parent=Thaps262125;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . exon 797644 797811 . + . ID=Thaps262125.4;Parent=Thaps262125;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 801886 805038 . - . ID=Thaps4347;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ10];external_name=Thaps4347;logic_name=jgi_thaps3 chr4 ensembl transcript 801886 805038 . - . ID=Thaps4347;Parent=Thaps4347;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 801886 805038 . - 0 ID=Thaps4347;Parent=Thaps4347;rank=1 chr4 . exon 801886 805038 . - . ID=Thaps4347.1;Parent=Thaps4347;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 806086 806681 . + . ID=Thaps4348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ11];external_name=Thaps4348;logic_name=jgi_thaps3 chr4 ensembl transcript 806086 806681 . + . ID=Thaps4348;Parent=Thaps4348;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 806086 806096 . + 0 ID=Thaps4348;Parent=Thaps4348;rank=1 chr4 . exon 806086 806096 . + . ID=Thaps4348.1;Parent=Thaps4348;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 806162 806681 . + 0 ID=Thaps4348;Parent=Thaps4348;rank=2 chr4 . exon 806162 806681 . + . ID=Thaps4348.2;Parent=Thaps4348;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 807421 808767 . - . ID=Thaps4349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ12];external_name=Thaps4349;logic_name=jgi_thaps3 chr4 ensembl transcript 807421 808767 . - . ID=Thaps4349;Parent=Thaps4349;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 807421 808767 . - 0 ID=Thaps4349;Parent=Thaps4349;rank=1 chr4 . exon 807421 808767 . - . ID=Thaps4349.1;Parent=Thaps4349;constitutive=1;rank=1 chr4 . repeat_region 809072 809102 . ? . description=dust chr4 . repeat_region 809073 809102 . ? . description=trf chr4 . repeat_region 809076 809102 . ? . description=trf chr4 . repeat_region 812387 812395 . ? . description=dust chr4 ensembl protein_coding_gene 811108 812232 . - . ID=Thaps22200;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ14];external_name=Thaps22200;logic_name=jgi_thaps3 chr4 ensembl transcript 811108 812232 . - . ID=Thaps22200;Parent=Thaps22200;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 811108 812232 . - 0 ID=Thaps22200;Parent=Thaps22200;rank=1 chr4 . exon 811108 812232 . - . ID=Thaps22200.1;Parent=Thaps22200;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 815720 819206 . + . ID=Thaps22202;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ17];external_name=Thaps22202;logic_name=jgi_thaps3 chr4 ensembl transcript 815720 819206 . + . ID=Thaps22202;Parent=Thaps22202;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 815720 816367 . + 0 ID=Thaps22202;Parent=Thaps22202;rank=1 chr4 . exon 815720 816367 . + . ID=Thaps22202.1;Parent=Thaps22202;constitutive=1;rank=1 chr4 . CDS 816429 819206 . + 0 ID=Thaps22202;Parent=Thaps22202;rank=2 chr4 . exon 816429 819206 . + . ID=Thaps22202.2;Parent=Thaps22202;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 809550 810980 . + . ID=Thaps4350;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ13];external_name=Thaps4350;logic_name=jgi_thaps3 chr4 ensembl transcript 809550 810980 . + . ID=Thaps4350;Parent=Thaps4350;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 809550 810980 . + 0 ID=Thaps4350;Parent=Thaps4350;rank=1 chr4 . exon 809550 810980 . + . ID=Thaps4350.1;Parent=Thaps4350;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 812798 813256 . + . ID=Thaps4352;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ15];external_name=Thaps4352;logic_name=jgi_thaps3 chr4 ensembl transcript 812798 813256 . + . ID=Thaps4352;Parent=Thaps4352;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 812798 813256 . + 0 ID=Thaps4352;Parent=Thaps4352;rank=1 chr4 . exon 812798 813256 . + . ID=Thaps4352.1;Parent=Thaps4352;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 813351 815338 . - . ID=Thaps4353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ16];external_name=Thaps4353;logic_name=jgi_thaps3 chr4 ensembl transcript 813351 815338 . - . ID=Thaps4353;Parent=Thaps4353;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 813351 813838 . - 0 ID=Thaps4353;Parent=Thaps4353;rank=2 chr4 . exon 813351 813838 . - . ID=Thaps4353.2;Parent=Thaps4353;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 813916 815338 . - 0 ID=Thaps4353;Parent=Thaps4353;rank=1 chr4 . exon 813916 815338 . - . ID=Thaps4353.1;Parent=Thaps4353;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 822573 824926 . + . ID=Thaps262126;biotype=protein_coding;description=Narf-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ19];external_name=Thaps262126;logic_name=jgi_thaps3 chr4 ensembl transcript 822573 824926 . + . ID=Thaps262126;Parent=Thaps262126;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 822573 822695 . + 0 ID=Thaps262126;Parent=Thaps262126;rank=1 chr4 . exon 822573 822695 . + . ID=Thaps262126.1;Parent=Thaps262126;constitutive=1;rank=1 chr4 . CDS 822957 823067 . + 0 ID=Thaps262126;Parent=Thaps262126;rank=2 chr4 . exon 822957 823067 . + . ID=Thaps262126.2;Parent=Thaps262126;constitutive=1;rank=2 chr4 . CDS 823140 823247 . + 0 ID=Thaps262126;Parent=Thaps262126;rank=3 chr4 . exon 823140 823247 . + . ID=Thaps262126.3;Parent=Thaps262126;constitutive=1;rank=3 chr4 . CDS 823287 823419 . + 0 ID=Thaps262126;Parent=Thaps262126;rank=4 chr4 . exon 823287 823419 . + . ID=Thaps262126.4;Parent=Thaps262126;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 823663 823812 . + 0 ID=Thaps262126;Parent=Thaps262126;rank=5 chr4 . exon 823663 823812 . + . ID=Thaps262126.5;Parent=Thaps262126;constitutive=1;rank=5 chr4 . CDS 823864 824008 . + 0 ID=Thaps262126;Parent=Thaps262126;rank=6 chr4 . exon 823864 824008 . + . ID=Thaps262126.6;Parent=Thaps262126;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 824042 824144 . + 0 ID=Thaps262126;Parent=Thaps262126;rank=7 chr4 . exon 824042 824144 . + . ID=Thaps262126.7;Parent=Thaps262126;constitutive=1;ensembl_end_phase=1;rank=7 chr4 . CDS 824289 824460 . + 0 ID=Thaps262126;Parent=Thaps262126;rank=8 chr4 . exon 824289 824460 . + . ID=Thaps262126.8;Parent=Thaps262126;constitutive=1;ensembl_end_phase=1;rank=8 chr4 . CDS 824569 824926 . + 0 ID=Thaps262126;Parent=Thaps262126;rank=9 chr4 . exon 824569 824926 . + . ID=Thaps262126.9;Parent=Thaps262126;constitutive=1;ensembl_end_phase=1;rank=9 chr4 ensembl protein_coding_gene 819694 821010 . - . ID=Thaps4355;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ18];external_name=Thaps4355;logic_name=jgi_thaps3 chr4 ensembl transcript 819694 821010 . - . ID=Thaps4355;Parent=Thaps4355;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 819694 819956 . - 0 ID=Thaps4355;Parent=Thaps4355;rank=5 chr4 . exon 819694 819956 . - . ID=Thaps4355.5;Parent=Thaps4355;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 820073 820281 . - 0 ID=Thaps4355;Parent=Thaps4355;rank=4 chr4 . exon 820073 820281 . - . ID=Thaps4355.4;Parent=Thaps4355;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 820356 820480 . - 0 ID=Thaps4355;Parent=Thaps4355;rank=3 chr4 . exon 820356 820480 . - . ID=Thaps4355.3;Parent=Thaps4355;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 820560 820604 . - 0 ID=Thaps4355;Parent=Thaps4355;rank=2 chr4 . exon 820560 820604 . - . ID=Thaps4355.2;Parent=Thaps4355;constitutive=1;rank=2 chr4 . CDS 820684 821010 . - 0 ID=Thaps4355;Parent=Thaps4355;rank=1 chr4 . exon 820684 821010 . - . ID=Thaps4355.1;Parent=Thaps4355;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 825206 826027 . - . ID=Thaps4357;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ20];external_name=Thaps4357;logic_name=jgi_thaps3 chr4 ensembl transcript 825206 826027 . - . ID=Thaps4357;Parent=Thaps4357;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 825206 826027 . - 0 ID=Thaps4357;Parent=Thaps4357;rank=1 chr4 . exon 825206 826027 . - . ID=Thaps4357.1;Parent=Thaps4357;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 826339 828222 . - . ID=Thaps4358;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ21];external_name=Thaps4358;logic_name=jgi_thaps3 chr4 ensembl transcript 826339 828222 . - . ID=Thaps4358;Parent=Thaps4358;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 826339 828222 . - 0 ID=Thaps4358;Parent=Thaps4358;rank=1 chr4 . exon 826339 828222 . - . ID=Thaps4358.1;Parent=Thaps4358;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 832344 832864 . - . ID=Thaps262127;biotype=protein_coding;description=L glycerol 3-phosphate acyltransferase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ24];external_name=Thaps262127;logic_name=jgi_thaps3 chr4 ensembl transcript 832344 832864 . - . ID=Thaps262127;Parent=Thaps262127;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 832344 832864 . - 0 ID=Thaps262127;Parent=Thaps262127;rank=1 chr4 . exon 832344 832864 . - . ID=Thaps262127.1;Parent=Thaps262127;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 829769 831538 . - . ID=Thaps33895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ23];external_name=Thaps33895;logic_name=jgi_thaps3 chr4 ensembl transcript 829769 831538 . - . ID=Thaps33895;Parent=Thaps33895;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 829769 831538 . - 0 ID=Thaps33895;Parent=Thaps33895;rank=1 chr4 . exon 829769 831538 . - . ID=Thaps33895.1;Parent=Thaps33895;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 828517 829709 . + . ID=Thaps4359;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ22];external_name=Thaps4359;logic_name=jgi_thaps3 chr4 ensembl transcript 828517 829709 . + . ID=Thaps4359;Parent=Thaps4359;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 828517 828996 . + 0 ID=Thaps4359;Parent=Thaps4359;rank=1 chr4 . exon 828517 828996 . + . ID=Thaps4359.1;Parent=Thaps4359;constitutive=1;rank=1 chr4 . CDS 829068 829709 . + 0 ID=Thaps4359;Parent=Thaps4359;rank=2 chr4 . exon 829068 829709 . + . ID=Thaps4359.2;Parent=Thaps4359;constitutive=1;rank=2 chr4 . repeat_region 843948 843968 . ? . description=trf chr4 . repeat_region 843948 843968 . ? . description=dust chr4 . repeat_region 845084 845124 . ? . description=trf chr4 . repeat_region 845084 845124 . ? . description=dust chr4 ensembl protein_coding_gene 842916 844469 . - . ID=Thaps22203;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ28];external_name=Thaps22203;logic_name=jgi_thaps3 chr4 ensembl transcript 842916 844469 . - . ID=Thaps22203;Parent=Thaps22203;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 842916 844469 . - 0 ID=Thaps22203;Parent=Thaps22203;rank=1 chr4 . exon 842916 844469 . - . ID=Thaps22203.1;Parent=Thaps22203;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 844705 847989 . + . ID=Thaps22204;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ29];external_name=Thaps22204;logic_name=jgi_thaps3 chr4 ensembl transcript 844705 847989 . + . ID=Thaps22204;Parent=Thaps22204;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 844705 847454 . + 0 ID=Thaps22204;Parent=Thaps22204;rank=1 chr4 . exon 844705 847454 . + . ID=Thaps22204.1;Parent=Thaps22204;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 847551 847989 . + 0 ID=Thaps22204;Parent=Thaps22204;rank=2 chr4 ensembl protein_coding_gene 837533 837708 . - . ID=Thaps262129;biotype=protein_coding;description=Putative uncharacterized protein ZFP18 [Source:UniProtKB/TrEMBL%3BAcc:B8BZ25];external_name=ZFP18;logic_name=jgi_thaps3 chr4 ensembl transcript 837533 837708 . - . ID=Thaps262129;Parent=Thaps262129;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 837533 837629 . - 0 ID=Thaps262129;Parent=Thaps262129;rank=2 chr4 . exon 837533 837629 . - . ID=Thaps262129.2;Parent=Thaps262129;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 837648 837708 . - 0 ID=Thaps262129;Parent=Thaps262129;rank=1 chr4 . exon 837648 837708 . - . ID=Thaps262129.1;Parent=Thaps262129;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 840276 841382 . + . ID=Thaps4362;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ26];external_name=Thaps4362;logic_name=jgi_thaps3 chr4 ensembl transcript 840276 841382 . + . ID=Thaps4362;Parent=Thaps4362;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 840276 841016 . + 0 ID=Thaps4362;Parent=Thaps4362;rank=1 chr4 . exon 840276 841016 . + . ID=Thaps4362.1;Parent=Thaps4362;constitutive=1;rank=1 chr4 . CDS 841110 841382 . + 0 ID=Thaps4362;Parent=Thaps4362;rank=2 chr4 . exon 841110 841382 . + . ID=Thaps4362.2;Parent=Thaps4362;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 841709 842602 . - . ID=Thaps4363;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ27];external_name=Thaps4363;logic_name=jgi_thaps3 chr4 ensembl transcript 841709 842602 . - . ID=Thaps4363;Parent=Thaps4363;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 841709 842602 . - 0 ID=Thaps4363;Parent=Thaps4363;rank=1 chr4 . exon 841709 842602 . - . ID=Thaps4363.1;Parent=Thaps4363;constitutive=1;rank=1 chr4 . exon 847551 847989 . + . ID=Thaps22204.2;Parent=Thaps22204;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 851525 852617 . + . ID=Thaps268661;biotype=protein_coding;description=Poly-a binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ31];external_name=PAB1;logic_name=jgi_thaps3 chr4 ensembl transcript 851525 852617 . + . ID=Thaps268661;Parent=Thaps268661;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 851525 851736 . + 0 ID=Thaps268661;Parent=Thaps268661;rank=1 chr4 . exon 851525 851736 . + . ID=Thaps268661.1;Parent=Thaps268661;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 851964 852091 . + 0 ID=Thaps268661;Parent=Thaps268661;rank=2 chr4 . exon 851964 852091 . + . ID=Thaps268661.2;Parent=Thaps268661;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 852194 852216 . + 0 ID=Thaps268661;Parent=Thaps268661;rank=3 chr4 . exon 852194 852216 . + . ID=Thaps268661.3;Parent=Thaps268661;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 852558 852617 . + 0 ID=Thaps268661;Parent=Thaps268661;rank=4 chr4 . exon 852558 852617 . + . ID=Thaps268661.4;Parent=Thaps268661;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 849240 850113 . - . ID=Thaps27834;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ30];external_name=Thaps27834;logic_name=jgi_thaps3 chr4 ensembl transcript 849240 850113 . - . ID=Thaps27834;Parent=Thaps27834;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 849240 849778 . - 0 ID=Thaps27834;Parent=Thaps27834;rank=2 chr4 . exon 849240 849778 . - . ID=Thaps27834.2;Parent=Thaps27834;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 849999 850113 . - 0 ID=Thaps27834;Parent=Thaps27834;rank=1 chr4 . exon 849999 850113 . - . ID=Thaps27834.1;Parent=Thaps27834;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 853019 854590 . - . ID=Thaps27836;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ32];external_name=Thaps27836;logic_name=jgi_thaps3 chr4 ensembl transcript 853019 854590 . - . ID=Thaps27836;Parent=Thaps27836;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 853019 854590 . - 0 ID=Thaps27836;Parent=Thaps27836;rank=1 chr4 . exon 853019 854590 . - . ID=Thaps27836.1;Parent=Thaps27836;constitutive=1;rank=1 chr4 . repeat_region 857613 857622 . ? . description=dust chr4 . biological_region 858199 858199 0.999 + . logic_name=eponine chr4 ensembl protein_coding_gene 861917 863508 . + . ID=Thaps22208;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ35];external_name=Thaps22208;logic_name=jgi_thaps3 chr4 ensembl transcript 861917 863508 . + . ID=Thaps22208;Parent=Thaps22208;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 861917 862248 . + 0 ID=Thaps22208;Parent=Thaps22208;rank=1 chr4 . exon 861917 862248 . + . ID=Thaps22208.1;Parent=Thaps22208;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 862341 863189 . + 0 ID=Thaps22208;Parent=Thaps22208;rank=2 chr4 . exon 862341 863189 . + . ID=Thaps22208.2;Parent=Thaps22208;constitutive=1;rank=2 chr4 . CDS 863271 863508 . + 0 ID=Thaps22208;Parent=Thaps22208;rank=3 chr4 . exon 863271 863508 . + . ID=Thaps22208.3;Parent=Thaps22208;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 865404 866549 . + . ID=Thaps22211;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ38];external_name=Thaps22211;logic_name=jgi_thaps3 chr4 ensembl transcript 865404 866549 . + . ID=Thaps22211;Parent=Thaps22211;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 865404 866549 . + 0 ID=Thaps22211;Parent=Thaps22211;rank=1 chr4 . exon 865404 866549 . + . ID=Thaps22211.1;Parent=Thaps22211;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 866793 869632 . + . ID=Thaps22212;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ39];external_name=Thaps22212;logic_name=jgi_thaps3 chr4 ensembl transcript 866793 869632 . + . ID=Thaps22212;Parent=Thaps22212;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 866793 867798 . + 0 ID=Thaps22212;Parent=Thaps22212;rank=1 chr4 . exon 866793 867798 . + . ID=Thaps22212.1;Parent=Thaps22212;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 867834 869078 . + 0 ID=Thaps22212;Parent=Thaps22212;rank=2 chr4 . CDS 869172 869632 . + 0 ID=Thaps22212;Parent=Thaps22212;rank=3 chr4 ensembl protein_coding_gene 858380 859261 . + . ID=Thaps33941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ33];external_name=Thaps33941;logic_name=jgi_thaps3 chr4 ensembl transcript 858380 859261 . + . ID=Thaps33941;Parent=Thaps33941;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 858380 859261 . + 0 ID=Thaps33941;Parent=Thaps33941;rank=1 chr4 . exon 858380 859261 . + . ID=Thaps33941.1;Parent=Thaps33941;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 864457 865002 . - . ID=Thaps40265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ37];external_name=Thaps40265;logic_name=jgi_thaps3 chr4 ensembl transcript 864457 865002 . - . ID=Thaps40265;Parent=Thaps40265;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 864457 865002 . - 0 ID=Thaps40265;Parent=Thaps40265;rank=1 chr4 . exon 864457 865002 . - . ID=Thaps40265.1;Parent=Thaps40265;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 859858 861558 . - . ID=Thaps4370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ34];external_name=Thaps4370;logic_name=jgi_thaps3 chr4 ensembl transcript 859858 861558 . - . ID=Thaps4370;Parent=Thaps4370;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 859858 860283 . - 0 ID=Thaps4370;Parent=Thaps4370;rank=3 chr4 . exon 859858 860283 . - . ID=Thaps4370.3;Parent=Thaps4370;constitutive=1;rank=3 chr4 . CDS 860369 860995 . - 0 ID=Thaps4370;Parent=Thaps4370;rank=2 chr4 . exon 860369 860995 . - . ID=Thaps4370.2;Parent=Thaps4370;constitutive=1;rank=2 chr4 . CDS 861076 861558 . - 0 ID=Thaps4370;Parent=Thaps4370;rank=1 chr4 . exon 861076 861558 . - . ID=Thaps4370.1;Parent=Thaps4370;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 863644 864378 . - . ID=Thaps4372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ36];external_name=Thaps4372;logic_name=jgi_thaps3 chr4 ensembl transcript 863644 864378 . - . ID=Thaps4372;Parent=Thaps4372;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 863644 864378 . - 0 ID=Thaps4372;Parent=Thaps4372;rank=1 chr4 . exon 863644 864378 . - . ID=Thaps4372.1;Parent=Thaps4372;constitutive=1;rank=1 chr4 . exon 867834 869078 . + . ID=Thaps22212.2;Parent=Thaps22212;constitutive=1;rank=2 chr4 . exon 869172 869632 . + . ID=Thaps22212.3;Parent=Thaps22212;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 872285 873682 . + . ID=Thaps22213;biotype=protein_coding;description=Phosphofructokinase [Source:UniProtKB/TrEMBL%3BAcc:B8BZ41];external_name=PFK2;logic_name=jgi_thaps3 chr4 ensembl transcript 872285 873682 . + . ID=Thaps22213;Parent=Thaps22213;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 872285 872542 . + 0 ID=Thaps22213;Parent=Thaps22213;rank=1 chr4 . exon 872285 872542 . + . ID=Thaps22213.1;Parent=Thaps22213;constitutive=1;rank=1 chr4 . CDS 872717 873682 . + 0 ID=Thaps22213;Parent=Thaps22213;rank=2 chr4 . exon 872717 873682 . + . ID=Thaps22213.2;Parent=Thaps22213;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 874186 874694 . - . ID=Thaps22214;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ42];external_name=Thaps22214;logic_name=jgi_thaps3 chr4 ensembl transcript 874186 874694 . - . ID=Thaps22214;Parent=Thaps22214;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 874186 874330 . - 0 ID=Thaps22214;Parent=Thaps22214;rank=3 chr4 . exon 874186 874330 . - . ID=Thaps22214.3;Parent=Thaps22214;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 874459 874566 . - 0 ID=Thaps22214;Parent=Thaps22214;rank=2 chr4 . exon 874459 874566 . - . ID=Thaps22214.2;Parent=Thaps22214;constitutive=1;rank=2 chr4 . CDS 874627 874694 . - 0 ID=Thaps22214;Parent=Thaps22214;rank=1 chr4 . exon 874627 874694 . - . ID=Thaps22214.1;Parent=Thaps22214;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 870636 871805 . + . ID=Thaps4376;biotype=protein_coding;description=Phosphoribulokinase [Source:UniProtKB/TrEMBL%3BAcc:B8BZ40];external_name=PRK1;logic_name=jgi_thaps3 chr4 ensembl transcript 870636 871805 . + . ID=Thaps4376;Parent=Thaps4376;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 870636 871805 . + 0 ID=Thaps4376;Parent=Thaps4376;rank=1 chr4 . exon 870636 871805 . + . ID=Thaps4376.1;Parent=Thaps4376;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 875382 877895 . + . ID=Thaps4379;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ43];external_name=Thaps4379;logic_name=jgi_thaps3 chr4 ensembl transcript 875382 877895 . + . ID=Thaps4379;Parent=Thaps4379;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 875382 877895 . + 0 ID=Thaps4379;Parent=Thaps4379;rank=1 chr4 . exon 875382 877895 . + . ID=Thaps4379.1;Parent=Thaps4379;constitutive=1;rank=1 chr4 . repeat_region 885174 885210 . ? . description=trf chr4 ensembl protein_coding_gene 878030 880390 . - . ID=Thaps22215;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ44];external_name=Thaps22215;logic_name=jgi_thaps3 chr4 ensembl transcript 878030 880390 . - . ID=Thaps22215;Parent=Thaps22215;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 878030 878483 . - 0 ID=Thaps22215;Parent=Thaps22215;rank=5 chr4 . exon 878030 878483 . - . ID=Thaps22215.5;Parent=Thaps22215;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 878581 879081 . - 0 ID=Thaps22215;Parent=Thaps22215;rank=4 chr4 . exon 878581 879081 . - . ID=Thaps22215.4;Parent=Thaps22215;constitutive=1;rank=4 chr4 . CDS 879160 879931 . - 0 ID=Thaps22215;Parent=Thaps22215;rank=3 chr4 . exon 879160 879931 . - . ID=Thaps22215.3;Parent=Thaps22215;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 880143 880183 . - 0 ID=Thaps22215;Parent=Thaps22215;rank=2 chr4 . exon 880143 880183 . - . ID=Thaps22215.2;Parent=Thaps22215;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 880308 880390 . - 0 ID=Thaps22215;Parent=Thaps22215;rank=1 chr4 . exon 880308 880390 . - . ID=Thaps22215.1;Parent=Thaps22215;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 885495 886643 . + . ID=Thaps33868;biotype=protein_coding;description=Probable eh domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ45];external_name=Thaps33868;logic_name=jgi_thaps3 chr4 ensembl transcript 885495 886643 . + . ID=Thaps33868;Parent=Thaps33868;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 885495 886643 . + 0 ID=Thaps33868;Parent=Thaps33868;rank=1 chr4 . exon 885495 886643 . + . ID=Thaps33868.1;Parent=Thaps33868;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 889675 891727 . - . ID=Thaps22218;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ48];external_name=Thaps22218;logic_name=jgi_thaps3 chr4 ensembl transcript 889675 891727 . - . ID=Thaps22218;Parent=Thaps22218;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 889675 891041 . - 0 ID=Thaps22218;Parent=Thaps22218;rank=2 chr4 . exon 889675 891041 . - . ID=Thaps22218.2;Parent=Thaps22218;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 891127 891727 . - 0 ID=Thaps22218;Parent=Thaps22218;rank=1 chr4 . exon 891127 891727 . - . ID=Thaps22218.1;Parent=Thaps22218;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 888912 889325 . + . ID=Thaps33576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ47];external_name=Thaps33576;logic_name=jgi_thaps3 chr4 ensembl transcript 888912 889325 . + . ID=Thaps33576;Parent=Thaps33576;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 888912 889325 . + 0 ID=Thaps33576;Parent=Thaps33576;rank=1 chr4 . exon 888912 889325 . + . ID=Thaps33576.1;Parent=Thaps33576;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 887252 888313 . - . ID=Thaps4382;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ46];external_name=Thaps4382;logic_name=jgi_thaps3 chr4 ensembl transcript 887252 888313 . - . ID=Thaps4382;Parent=Thaps4382;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 887252 887944 . - 0 ID=Thaps4382;Parent=Thaps4382;rank=2 chr4 . exon 887252 887944 . - . ID=Thaps4382.2;Parent=Thaps4382;constitutive=1;rank=2 chr4 . CDS 888152 888313 . - 0 ID=Thaps4382;Parent=Thaps4382;rank=1 chr4 . exon 888152 888313 . - . ID=Thaps4382.1;Parent=Thaps4382;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 893273 894559 . + . ID=Thaps4385;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ49];external_name=Thaps4385;logic_name=jgi_thaps3 chr4 ensembl transcript 893273 894559 . + . ID=Thaps4385;Parent=Thaps4385;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 893273 894436 . + 0 ID=Thaps4385;Parent=Thaps4385;rank=1 chr4 . exon 893273 894436 . + . ID=Thaps4385.1;Parent=Thaps4385;constitutive=1;rank=1 chr4 . CDS 894479 894559 . + 0 ID=Thaps4385;Parent=Thaps4385;rank=2 chr4 . exon 894479 894559 . + . ID=Thaps4385.2;Parent=Thaps4385;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 895027 896151 . + . ID=Thaps4386;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ50];external_name=Thaps4386;logic_name=jgi_thaps3 chr4 ensembl transcript 895027 896151 . + . ID=Thaps4386;Parent=Thaps4386;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 895027 896151 . + 0 ID=Thaps4386;Parent=Thaps4386;rank=1 chr4 . exon 895027 896151 . + . ID=Thaps4386.1;Parent=Thaps4386;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 896445 897690 . + . ID=Thaps4387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ51];external_name=Thaps4387;logic_name=jgi_thaps3 chr4 ensembl transcript 896445 897690 . + . ID=Thaps4387;Parent=Thaps4387;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 896445 896632 . + 0 ID=Thaps4387;Parent=Thaps4387;rank=1 chr4 . exon 896445 896632 . + . ID=Thaps4387.1;Parent=Thaps4387;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 896718 897141 . + 0 ID=Thaps4387;Parent=Thaps4387;rank=2 chr4 . exon 896718 897141 . + . ID=Thaps4387.2;Parent=Thaps4387;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 897217 897690 . + 0 ID=Thaps4387;Parent=Thaps4387;rank=3 chr4 . repeat_region 901526 901581 . ? . description=trf chr4 ensembl tRNA_gene 905361 905445 . - . ID=EPrTPOG00000000077;biotype=tRNA;description=tRNA-Thr for anticodon UGU [Source:TRNASCAN_SE%3BAcc:tRNA-Thr];external_name=tRNA-Thr;logic_name=ncrna_eg chr4 ensembl transcript 905361 905445 . - . ID=EPrTPOT00000000077;Parent=EPrTPOG00000000077;biotype=tRNA;logic_name=ncrna_eg chr4 . exon 905361 905445 . - . ID=EPrTPOE00000000077;Parent=EPrTPOT00000000077;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 899664 901292 . + . ID=Thaps22220;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ53];external_name=Thaps22220;logic_name=jgi_thaps3 chr4 ensembl transcript 899664 901292 . + . ID=Thaps22220;Parent=Thaps22220;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 899664 900084 . + 0 ID=Thaps22220;Parent=Thaps22220;rank=1 chr4 . exon 899664 900084 . + . ID=Thaps22220.1;Parent=Thaps22220;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 900187 901292 . + 0 ID=Thaps22220;Parent=Thaps22220;rank=2 chr4 . exon 900187 901292 . + . ID=Thaps22220.2;Parent=Thaps22220;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 902190 903191 . - . ID=Thaps22221;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ54];external_name=Thaps22221;logic_name=jgi_thaps3 chr4 ensembl transcript 902190 903191 . - . ID=Thaps22221;Parent=Thaps22221;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 902190 903191 . - 0 ID=Thaps22221;Parent=Thaps22221;rank=1 chr4 . exon 902190 903191 . - . ID=Thaps22221.1;Parent=Thaps22221;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 906019 907281 . - . ID=Thaps22223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ56];external_name=Thaps22223;logic_name=jgi_thaps3 chr4 ensembl transcript 906019 907281 . - . ID=Thaps22223;Parent=Thaps22223;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 906019 907281 . - 0 ID=Thaps22223;Parent=Thaps22223;rank=1 chr4 . exon 906019 907281 . - . ID=Thaps22223.1;Parent=Thaps22223;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 897797 898758 . - . ID=Thaps262136;biotype=protein_coding;description=Tim44-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ52];external_name=Thaps262136;logic_name=jgi_thaps3 chr4 ensembl transcript 897797 898758 . - . ID=Thaps262136;Parent=Thaps262136;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 897797 897936 . - 0 ID=Thaps262136;Parent=Thaps262136;rank=3 chr4 . exon 897797 897936 . - . ID=Thaps262136.3;Parent=Thaps262136;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 898051 898590 . - 0 ID=Thaps262136;Parent=Thaps262136;rank=2 chr4 . exon 898051 898590 . - . ID=Thaps262136.2;Parent=Thaps262136;constitutive=1;rank=2 chr4 . CDS 898680 898758 . - 0 ID=Thaps262136;Parent=Thaps262136;rank=1 chr4 . exon 898680 898758 . - . ID=Thaps262136.1;Parent=Thaps262136;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 903859 904616 . - . ID=Thaps33701;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ55];external_name=Thaps33701;logic_name=jgi_thaps3 chr4 ensembl transcript 903859 904616 . - . ID=Thaps33701;Parent=Thaps33701;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 903859 904104 . - 0 ID=Thaps33701;Parent=Thaps33701;rank=3 chr4 . exon 903859 904104 . - . ID=Thaps33701.3;Parent=Thaps33701;constitutive=1;rank=3 chr4 . CDS 904194 904304 . - 0 ID=Thaps33701;Parent=Thaps33701;rank=2 chr4 . exon 904194 904304 . - . ID=Thaps33701.2;Parent=Thaps33701;constitutive=1;rank=2 chr4 . CDS 904344 904616 . - 0 ID=Thaps33701;Parent=Thaps33701;rank=1 chr4 . exon 904344 904616 . - . ID=Thaps33701.1;Parent=Thaps33701;constitutive=1;rank=1 chr4 . exon 897217 897690 . + . ID=Thaps4387.3;Parent=Thaps4387;constitutive=1;rank=3 chr4 . repeat_region 907639 907689 . ? . description=dust chr4 . biological_region 908048 908050 0.999 - . logic_name=eponine chr4 ensembl protein_coding_gene 907914 908612 . + . ID=Thaps268668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ57];external_name=Thaps268668;logic_name=jgi_thaps3 chr4 ensembl transcript 907914 908612 . + . ID=Thaps268668;Parent=Thaps268668;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 907914 908612 . + 0 ID=Thaps268668;Parent=Thaps268668;rank=1 chr4 . exon 907914 908612 . + . ID=Thaps268668.1;Parent=Thaps268668;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 910207 910983 . - . ID=Thaps268669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ58];external_name=Thaps268669;logic_name=jgi_thaps3 chr4 ensembl transcript 910207 910983 . - . ID=Thaps268669;Parent=Thaps268669;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 910207 910983 . - 0 ID=Thaps268669;Parent=Thaps268669;rank=1 chr4 . exon 910207 910983 . - . ID=Thaps268669.1;Parent=Thaps268669;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 914572 915539 . - . ID=Thaps33955;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ60];external_name=Thaps33955;logic_name=jgi_thaps3 chr4 ensembl transcript 914572 915539 . - . ID=Thaps33955;Parent=Thaps33955;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 914572 914790 . - 0 ID=Thaps33955;Parent=Thaps33955;rank=3 chr4 . exon 914572 914790 . - . ID=Thaps33955.3;Parent=Thaps33955;constitutive=1;rank=3 chr4 . CDS 914887 915036 . - 0 ID=Thaps33955;Parent=Thaps33955;rank=2 chr4 . exon 914887 915036 . - . ID=Thaps33955.2;Parent=Thaps33955;constitutive=1;rank=2 chr4 . CDS 915114 915539 . - 0 ID=Thaps33955;Parent=Thaps33955;rank=1 chr4 . exon 915114 915539 . - . ID=Thaps33955.1;Parent=Thaps33955;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 912113 913453 . + . ID=Thaps4395;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ59];external_name=Thaps4395;logic_name=jgi_thaps3 chr4 ensembl transcript 912113 913453 . + . ID=Thaps4395;Parent=Thaps4395;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 912113 913453 . + 0 ID=Thaps4395;Parent=Thaps4395;rank=1 chr4 . exon 912113 913453 . + . ID=Thaps4395.1;Parent=Thaps4395;constitutive=1;rank=1 chr4 . repeat_region 918184 918206 . ? . description=trf chr4 . repeat_region 920681 920709 . ? . description=trf chr4 . repeat_region 926068 926107 . ? . description=trf chr4 ensembl protein_coding_gene 917242 919253 . - . ID=Thaps22227;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ61];external_name=Thaps22227;logic_name=jgi_thaps3 chr4 ensembl transcript 917242 919253 . - . ID=Thaps22227;Parent=Thaps22227;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 917242 918562 . - 0 ID=Thaps22227;Parent=Thaps22227;rank=2 chr4 . exon 917242 918562 . - . ID=Thaps22227.2;Parent=Thaps22227;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 918694 919253 . - 0 ID=Thaps22227;Parent=Thaps22227;rank=1 chr4 . exon 918694 919253 . - . ID=Thaps22227.1;Parent=Thaps22227;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 921845 922060 . + . ID=Thaps262141;biotype=protein_coding;description=Pathogenesis-related transcription factor [Source:UniProtKB/TrEMBL%3BAcc:B8BZ62];external_name=Thaps262141;logic_name=jgi_thaps3 chr4 ensembl transcript 921845 922060 . + . ID=Thaps262141;Parent=Thaps262141;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 921845 922060 . + 0 ID=Thaps262141;Parent=Thaps262141;rank=1 chr4 . exon 921845 922060 . + . ID=Thaps262141.1;Parent=Thaps262141;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 924267 925561 . + . ID=Thaps4399;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ63];external_name=Thaps4399;logic_name=jgi_thaps3 chr4 ensembl transcript 924267 925561 . + . ID=Thaps4399;Parent=Thaps4399;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 924267 924594 . + 0 ID=Thaps4399;Parent=Thaps4399;rank=1 chr4 . exon 924267 924594 . + . ID=Thaps4399.1;Parent=Thaps4399;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 924676 924876 . + 0 ID=Thaps4399;Parent=Thaps4399;rank=2 chr4 . exon 924676 924876 . + . ID=Thaps4399.2;Parent=Thaps4399;constitutive=1;rank=2 chr4 . CDS 924933 925042 . + 0 ID=Thaps4399;Parent=Thaps4399;rank=3 chr4 . exon 924933 925042 . + . ID=Thaps4399.3;Parent=Thaps4399;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 925127 925561 . + 0 ID=Thaps4399;Parent=Thaps4399;rank=4 chr4 . exon 925127 925561 . + . ID=Thaps4399.4;Parent=Thaps4399;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 930181 931130 . - . ID=Thaps268671;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ64];external_name=Thaps268671;logic_name=jgi_thaps3 chr4 ensembl transcript 930181 931130 . - . ID=Thaps268671;Parent=Thaps268671;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 930181 930709 . - 0 ID=Thaps268671;Parent=Thaps268671;rank=3 chr4 . exon 930181 930709 . - . ID=Thaps268671.3;Parent=Thaps268671;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 930811 930879 . - 0 ID=Thaps268671;Parent=Thaps268671;rank=2 chr4 . exon 930811 930879 . - . ID=Thaps268671.2;Parent=Thaps268671;constitutive=1;rank=2 chr4 . CDS 930922 931130 . - 0 ID=Thaps268671;Parent=Thaps268671;rank=1 chr4 . exon 930922 931130 . - . ID=Thaps268671.1;Parent=Thaps268671;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 933262 933727 . + . ID=Thaps4402;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ65];external_name=Thaps4402;logic_name=jgi_thaps3 chr4 ensembl transcript 933262 933727 . + . ID=Thaps4402;Parent=Thaps4402;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 933262 933501 . + 0 ID=Thaps4402;Parent=Thaps4402;rank=1 chr4 . exon 933262 933501 . + . ID=Thaps4402.1;Parent=Thaps4402;constitutive=1;rank=1 chr4 . CDS 933611 933727 . + 0 ID=Thaps4402;Parent=Thaps4402;rank=2 chr4 . exon 933611 933727 . + . ID=Thaps4402.2;Parent=Thaps4402;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 933837 935321 . - . ID=Thaps4403;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ66];external_name=Thaps4403;logic_name=jgi_thaps3 chr4 ensembl transcript 933837 935321 . - . ID=Thaps4403;Parent=Thaps4403;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 933837 935321 . - 0 ID=Thaps4403;Parent=Thaps4403;rank=1 chr4 . exon 933837 935321 . - . ID=Thaps4403.1;Parent=Thaps4403;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 937067 937678 . - . ID=Thaps4404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ67];external_name=Thaps4404;logic_name=jgi_thaps3 chr4 ensembl transcript 937067 937678 . - . ID=Thaps4404;Parent=Thaps4404;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 937067 937678 . - 0 ID=Thaps4404;Parent=Thaps4404;rank=1 chr4 . exon 937067 937678 . - . ID=Thaps4404.1;Parent=Thaps4404;constitutive=1;rank=1 chr4 . repeat_region 940320 940328 . ? . description=dust chr4 ensembl protein_coding_gene 939272 940165 . - . ID=Thaps22231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ69];external_name=Thaps22231;logic_name=jgi_thaps3 chr4 ensembl transcript 939272 940165 . - . ID=Thaps22231;Parent=Thaps22231;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 939272 940165 . - 0 ID=Thaps22231;Parent=Thaps22231;rank=1 chr4 . exon 939272 940165 . - . ID=Thaps22231.1;Parent=Thaps22231;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 940569 941706 . - . ID=Thaps27850;biotype=protein_coding;description=Phosphoglycerate mutase [Source:UniProtKB/TrEMBL%3BAcc:B8BZ70];external_name=PGAM2;logic_name=jgi_thaps3 chr4 ensembl transcript 940569 941706 . - . ID=Thaps27850;Parent=Thaps27850;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 940569 941358 . - 0 ID=Thaps27850;Parent=Thaps27850;rank=2 chr4 . exon 940569 941358 . - . ID=Thaps27850.2;Parent=Thaps27850;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 941624 941706 . - 0 ID=Thaps27850;Parent=Thaps27850;rank=1 chr4 . exon 941624 941706 . - . ID=Thaps27850.1;Parent=Thaps27850;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 944169 944762 . - . ID=Thaps27852;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ73];external_name=Thaps27852;logic_name=jgi_thaps3 chr4 ensembl transcript 944169 944762 . - . ID=Thaps27852;Parent=Thaps27852;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 944169 944762 . - 0 ID=Thaps27852;Parent=Thaps27852;rank=1 chr4 . exon 944169 944762 . - . ID=Thaps27852.1;Parent=Thaps27852;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 938523 938963 . + . ID=Thaps4405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ68];external_name=Thaps4405;logic_name=jgi_thaps3 chr4 ensembl transcript 938523 938963 . + . ID=Thaps4405;Parent=Thaps4405;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 938523 938667 . + 0 ID=Thaps4405;Parent=Thaps4405;rank=1 chr4 . exon 938523 938667 . + . ID=Thaps4405.1;Parent=Thaps4405;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 938764 938963 . + 0 ID=Thaps4405;Parent=Thaps4405;rank=2 chr4 . exon 938764 938963 . + . ID=Thaps4405.2;Parent=Thaps4405;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 941973 943058 . + . ID=Thaps4408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ71];external_name=Thaps4408;logic_name=jgi_thaps3 chr4 ensembl transcript 941973 943058 . + . ID=Thaps4408;Parent=Thaps4408;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 941973 943058 . + 0 ID=Thaps4408;Parent=Thaps4408;rank=1 chr4 . exon 941973 943058 . + . ID=Thaps4408.1;Parent=Thaps4408;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 943124 943951 . - . ID=Thaps4409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ72];external_name=Thaps4409;logic_name=jgi_thaps3 chr4 ensembl transcript 943124 943951 . - . ID=Thaps4409;Parent=Thaps4409;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 943124 943709 . - 0 ID=Thaps4409;Parent=Thaps4409;rank=2 chr4 . exon 943124 943709 . - . ID=Thaps4409.2;Parent=Thaps4409;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 943788 943951 . - 0 ID=Thaps4409;Parent=Thaps4409;rank=1 chr4 . exon 943788 943951 . - . ID=Thaps4409.1;Parent=Thaps4409;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 946104 947150 . + . ID=Thaps4411;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ74];external_name=Thaps4411;logic_name=jgi_thaps3 chr4 ensembl transcript 946104 947150 . + . ID=Thaps4411;Parent=Thaps4411;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 946104 947150 . + 0 ID=Thaps4411;Parent=Thaps4411;rank=1 chr4 . exon 946104 947150 . + . ID=Thaps4411.1;Parent=Thaps4411;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 947797 949146 . - . ID=Thaps22234;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ75];external_name=Thaps22234;logic_name=jgi_thaps3 chr4 ensembl transcript 947797 949146 . - . ID=Thaps22234;Parent=Thaps22234;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 947797 949146 . - 0 ID=Thaps22234;Parent=Thaps22234;rank=1 chr4 . exon 947797 949146 . - . ID=Thaps22234.1;Parent=Thaps22234;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 949853 950820 . - . ID=Thaps262146;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ76];external_name=Thaps262146;logic_name=jgi_thaps3 chr4 ensembl transcript 949853 950820 . - . ID=Thaps262146;Parent=Thaps262146;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 949853 950820 . - 0 ID=Thaps262146;Parent=Thaps262146;rank=1 chr4 . exon 949853 950820 . - . ID=Thaps262146.1;Parent=Thaps262146;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 951923 952191 . - . ID=Thaps262148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ77];external_name=Thaps262148;logic_name=jgi_thaps3 chr4 ensembl transcript 951923 952191 . - . ID=Thaps262148;Parent=Thaps262148;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 951923 951978 . - 0 ID=Thaps262148;Parent=Thaps262148;rank=2 chr4 . exon 951923 951978 . - . ID=Thaps262148.2;Parent=Thaps262148;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 952062 952191 . - 0 ID=Thaps262148;Parent=Thaps262148;rank=1 chr4 . exon 952062 952191 . - . ID=Thaps262148.1;Parent=Thaps262148;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 953932 954200 . + . ID=Thaps262149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ77];external_name=Thaps262149;logic_name=jgi_thaps3 chr4 ensembl transcript 953932 954200 . + . ID=Thaps262149;Parent=Thaps262149;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 953932 954061 . + 0 ID=Thaps262149;Parent=Thaps262149;rank=1 chr4 . exon 953932 954061 . + . ID=Thaps262149.1;Parent=Thaps262149;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 954145 954200 . + 0 ID=Thaps262149;Parent=Thaps262149;rank=2 chr4 . exon 954145 954200 . + . ID=Thaps262149.2;Parent=Thaps262149;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 955303 956273 . + . ID=Thaps262151;biotype=protein_coding;description=Chitin synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BZ79];external_name=Thaps262151;logic_name=jgi_thaps3 chr4 ensembl transcript 955303 956273 . + . ID=Thaps262151;Parent=Thaps262151;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 955303 956273 . + 0 ID=Thaps262151;Parent=Thaps262151;rank=1 chr4 . exon 955303 956273 . + . ID=Thaps262151.1;Parent=Thaps262151;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 956751 957806 . - . ID=Thaps4415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ80];external_name=Thaps4415;logic_name=jgi_thaps3 chr4 ensembl transcript 956751 957806 . - . ID=Thaps4415;Parent=Thaps4415;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 956751 957806 . - 0 ID=Thaps4415;Parent=Thaps4415;rank=1 chr4 . exon 956751 957806 . - . ID=Thaps4415.1;Parent=Thaps4415;constitutive=1;rank=1 chr4 . repeat_region 960348 960392 . ? . description=dust chr4 . repeat_region 966165 966211 . ? . description=trf chr4 ensembl protein_coding_gene 958071 959839 . - . ID=Thaps22237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ81];external_name=Thaps22237;logic_name=jgi_thaps3 chr4 ensembl transcript 958071 959839 . - . ID=Thaps22237;Parent=Thaps22237;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 958071 958536 . - 0 ID=Thaps22237;Parent=Thaps22237;rank=2 chr4 . exon 958071 958536 . - . ID=Thaps22237.2;Parent=Thaps22237;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 958656 959839 . - 0 ID=Thaps22237;Parent=Thaps22237;rank=1 chr4 . exon 958656 959839 . - . ID=Thaps22237.1;Parent=Thaps22237;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 961681 962000 . + . ID=Thaps262152;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ82];external_name=Thaps262152;logic_name=jgi_thaps3 chr4 ensembl transcript 961681 962000 . + . ID=Thaps262152;Parent=Thaps262152;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 961681 961789 . + 0 ID=Thaps262152;Parent=Thaps262152;rank=1 chr4 . exon 961681 961789 . + . ID=Thaps262152.1;Parent=Thaps262152;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 961880 962000 . + 0 ID=Thaps262152;Parent=Thaps262152;rank=2 chr4 . exon 961880 962000 . + . ID=Thaps262152.2;Parent=Thaps262152;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . biological_region 967831 967831 0.999 + . logic_name=eponine chr4 . biological_region 967940 967943 0.999 - . logic_name=eponine chr4 ensembl protein_coding_gene 974987 976530 . + . ID=Thaps22240;biotype=protein_coding;description=Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/TrEMBL%3BAcc:B8BZ85];external_name=Thaps22240;logic_name=jgi_thaps3 chr4 ensembl transcript 974987 976530 . + . ID=Thaps22240;Parent=Thaps22240;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 974987 975265 . + 0 ID=Thaps22240;Parent=Thaps22240;rank=1 chr4 . exon 974987 975265 . + . ID=Thaps22240.1;Parent=Thaps22240;constitutive=1;rank=1 chr4 . CDS 975427 976530 . + 0 ID=Thaps22240;Parent=Thaps22240;rank=2 chr4 . exon 975427 976530 . + . ID=Thaps22240.2;Parent=Thaps22240;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 969330 970349 . + . ID=Thaps262153;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ83];external_name=Thaps262153;logic_name=jgi_thaps3 chr4 ensembl transcript 969330 970349 . + . ID=Thaps262153;Parent=Thaps262153;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 969330 970349 . + 0 ID=Thaps262153;Parent=Thaps262153;rank=1 chr4 . exon 969330 970349 . + . ID=Thaps262153.1;Parent=Thaps262153;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 972513 974402 . - . ID=Thaps268678;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ84];external_name=Thaps268678;logic_name=jgi_thaps3 chr4 ensembl transcript 972513 974402 . - . ID=Thaps268678;Parent=Thaps268678;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 972513 973322 . - 0 ID=Thaps268678;Parent=Thaps268678;rank=5 chr4 . exon 972513 973322 . - . ID=Thaps268678.5;Parent=Thaps268678;constitutive=1;rank=5 chr4 . CDS 973443 973518 . - 0 ID=Thaps268678;Parent=Thaps268678;rank=4 chr4 . exon 973443 973518 . - . ID=Thaps268678.4;Parent=Thaps268678;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 973597 973951 . - 0 ID=Thaps268678;Parent=Thaps268678;rank=3 chr4 . exon 973597 973951 . - . ID=Thaps268678.3;Parent=Thaps268678;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 974033 974047 . - 0 ID=Thaps268678;Parent=Thaps268678;rank=2 chr4 . exon 974033 974047 . - . ID=Thaps268678.2;Parent=Thaps268678;constitutive=1;rank=2 chr4 . CDS 974090 974402 . - 0 ID=Thaps268678;Parent=Thaps268678;rank=1 chr4 . exon 974090 974402 . - . ID=Thaps268678.1;Parent=Thaps268678;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 985801 987227 . + . ID=Thaps22243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ90];external_name=Thaps22243;logic_name=jgi_thaps3 chr4 ensembl transcript 985801 987227 . + . ID=Thaps22243;Parent=Thaps22243;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 985801 985870 . + 0 ID=Thaps22243;Parent=Thaps22243;rank=1 chr4 . exon 985801 985870 . + . ID=Thaps22243.1;Parent=Thaps22243;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 985974 987109 . + 0 ID=Thaps22243;Parent=Thaps22243;rank=2 chr4 . exon 985974 987109 . + . ID=Thaps22243.2;Parent=Thaps22243;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 987186 987227 . + 0 ID=Thaps22243;Parent=Thaps22243;rank=3 chr4 ensembl protein_coding_gene 977170 977703 . - . ID=Thaps25949;biotype=protein_coding;description=RL11A%2C ribosomal protein 11A 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BZ86];external_name=RL11A;logic_name=jgi_thaps3 chr4 ensembl transcript 977170 977703 . - . ID=Thaps25949;Parent=Thaps25949;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 977170 977703 . - 0 ID=Thaps25949;Parent=Thaps25949;rank=1 chr4 . exon 977170 977703 . - . ID=Thaps25949.1;Parent=Thaps25949;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 978648 979511 . + . ID=Thaps4422;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ87];external_name=Thaps4422;logic_name=jgi_thaps3 chr4 ensembl transcript 978648 979511 . + . ID=Thaps4422;Parent=Thaps4422;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 978648 979511 . + 0 ID=Thaps4422;Parent=Thaps4422;rank=1 chr4 . exon 978648 979511 . + . ID=Thaps4422.1;Parent=Thaps4422;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 980679 982155 . + . ID=Thaps4423;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ88];external_name=Thaps4423;logic_name=jgi_thaps3 chr4 ensembl transcript 980679 982155 . + . ID=Thaps4423;Parent=Thaps4423;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 980679 982023 . + 0 ID=Thaps4423;Parent=Thaps4423;rank=1 chr4 . exon 980679 982023 . + . ID=Thaps4423.1;Parent=Thaps4423;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 982124 982155 . + 0 ID=Thaps4423;Parent=Thaps4423;rank=2 chr4 . exon 982124 982155 . + . ID=Thaps4423.2;Parent=Thaps4423;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 982759 985120 . - . ID=Thaps4424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ89];external_name=Thaps4424;logic_name=jgi_thaps3 chr4 ensembl transcript 982759 985120 . - . ID=Thaps4424;Parent=Thaps4424;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 982759 984306 . - 0 ID=Thaps4424;Parent=Thaps4424;rank=3 chr4 . exon 982759 984306 . - . ID=Thaps4424.3;Parent=Thaps4424;constitutive=1;rank=3 chr4 . CDS 984371 984425 . - 0 ID=Thaps4424;Parent=Thaps4424;rank=2 chr4 . exon 984371 984425 . - . ID=Thaps4424.2;Parent=Thaps4424;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 984516 985120 . - 0 ID=Thaps4424;Parent=Thaps4424;rank=1 chr4 . exon 984516 985120 . - . ID=Thaps4424.1;Parent=Thaps4424;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . repeat_region 987056 987094 . ? . description=trf chr4 . repeat_region 990310 990345 . ? . description=trf chr4 . repeat_region 990310 990345 . ? . description=dust chr4 . exon 987186 987227 . + . ID=Thaps22243.3;Parent=Thaps22243;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 987821 989964 . - . ID=Thaps22244;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ91];external_name=Thaps22244;logic_name=jgi_thaps3 chr4 ensembl transcript 987821 989964 . - . ID=Thaps22244;Parent=Thaps22244;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 987821 989364 . - 0 ID=Thaps22244;Parent=Thaps22244;rank=2 chr4 . exon 987821 989364 . - . ID=Thaps22244.2;Parent=Thaps22244;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 989391 989964 . - 0 ID=Thaps22244;Parent=Thaps22244;rank=1 chr4 . exon 989391 989964 . - . ID=Thaps22244.1;Parent=Thaps22244;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 996294 999790 . - . ID=Thaps22245;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ92];external_name=Thaps22245;logic_name=jgi_thaps3 chr4 ensembl transcript 996294 999790 . - . ID=Thaps22245;Parent=Thaps22245;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 996294 996426 . - 0 ID=Thaps22245;Parent=Thaps22245;rank=8 chr4 . exon 996294 996426 . - . ID=Thaps22245.8;Parent=Thaps22245;constitutive=1;ensembl_end_phase=1;rank=8 chr4 . CDS 996510 996625 . - 0 ID=Thaps22245;Parent=Thaps22245;rank=7 chr4 . exon 996510 996625 . - . ID=Thaps22245.7;Parent=Thaps22245;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . CDS 996702 996941 . - 0 ID=Thaps22245;Parent=Thaps22245;rank=6 chr4 . exon 996702 996941 . - . ID=Thaps22245.6;Parent=Thaps22245;constitutive=1;rank=6 chr4 . CDS 997023 997223 . - 0 ID=Thaps22245;Parent=Thaps22245;rank=5 chr4 . CDS 997310 997668 . - 0 ID=Thaps22245;Parent=Thaps22245;rank=4 chr4 . CDS 997755 998318 . - 0 ID=Thaps22245;Parent=Thaps22245;rank=3 chr4 . CDS 998460 998469 . - 0 ID=Thaps22245;Parent=Thaps22245;rank=2 chr4 . CDS 998549 999790 . - 0 ID=Thaps22245;Parent=Thaps22245;rank=1 chr4 . exon 997023 997223 . - . ID=Thaps22245.5;Parent=Thaps22245;constitutive=1;rank=5 chr4 . exon 997310 997668 . - . ID=Thaps22245.4;Parent=Thaps22245;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . exon 997755 998318 . - . ID=Thaps22245.3;Parent=Thaps22245;constitutive=1;rank=3 chr4 . exon 998460 998469 . - . ID=Thaps22245.2;Parent=Thaps22245;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 998549 999790 . - . ID=Thaps22245.1;Parent=Thaps22245;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1000828 1001571 . + . ID=Thaps22246;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ93];external_name=Thaps22246;logic_name=jgi_thaps3 chr4 ensembl transcript 1000828 1001571 . + . ID=Thaps22246;Parent=Thaps22246;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1000828 1001571 . + 0 ID=Thaps22246;Parent=Thaps22246;rank=1 chr4 . exon 1000828 1001571 . + . ID=Thaps22246.1;Parent=Thaps22246;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1002173 1004461 . + . ID=Thaps262157;biotype=protein_coding;description=Ubiquitin activating enzyme e1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ94];external_name=Thaps262157;logic_name=jgi_thaps3 chr4 ensembl transcript 1002173 1004461 . + . ID=Thaps262157;Parent=Thaps262157;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1002173 1002637 . + 0 ID=Thaps262157;Parent=Thaps262157;rank=1 chr4 . exon 1002173 1002637 . + . ID=Thaps262157.1;Parent=Thaps262157;constitutive=1;rank=1 chr4 . CDS 1002707 1003075 . + 0 ID=Thaps262157;Parent=Thaps262157;rank=2 chr4 . exon 1002707 1003075 . + . ID=Thaps262157.2;Parent=Thaps262157;constitutive=1;rank=2 chr4 . CDS 1003160 1004102 . + 0 ID=Thaps262157;Parent=Thaps262157;rank=3 chr4 . exon 1003160 1004102 . + . ID=Thaps262157.3;Parent=Thaps262157;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1004130 1004461 . + 0 ID=Thaps262157;Parent=Thaps262157;rank=4 chr4 . exon 1004130 1004461 . + . ID=Thaps262157.4;Parent=Thaps262157;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 1004587 1005480 . - . ID=Thaps4431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ95];external_name=Thaps4431;logic_name=jgi_thaps3 chr4 ensembl transcript 1004587 1005480 . - . ID=Thaps4431;Parent=Thaps4431;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1004587 1005480 . - 0 ID=Thaps4431;Parent=Thaps4431;rank=1 chr4 . exon 1004587 1005480 . - . ID=Thaps4431.1;Parent=Thaps4431;constitutive=1;rank=1 chr4 . repeat_region 1007898 1007953 . ? . description=dust chr4 ensembl protein_coding_gene 1007859 1010617 . - . ID=Thaps22248;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ96];external_name=Thaps22248;logic_name=jgi_thaps3 chr4 ensembl transcript 1007859 1010617 . - . ID=Thaps22248;Parent=Thaps22248;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1007859 1007884 . - 0 ID=Thaps22248;Parent=Thaps22248;rank=8 chr4 . exon 1007859 1007884 . - . ID=Thaps22248.8;Parent=Thaps22248;constitutive=1;ensembl_end_phase=2;rank=8 chr4 . CDS 1007973 1008731 . - 0 ID=Thaps22248;Parent=Thaps22248;rank=7 chr4 . exon 1007973 1008731 . - . ID=Thaps22248.7;Parent=Thaps22248;constitutive=1;rank=7 chr4 . CDS 1008798 1008894 . - 0 ID=Thaps22248;Parent=Thaps22248;rank=6 chr4 . exon 1008798 1008894 . - . ID=Thaps22248.6;Parent=Thaps22248;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 1008965 1009326 . - 0 ID=Thaps22248;Parent=Thaps22248;rank=5 chr4 . exon 1008965 1009326 . - . ID=Thaps22248.5;Parent=Thaps22248;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1009399 1009768 . - 0 ID=Thaps22248;Parent=Thaps22248;rank=4 chr4 . exon 1009399 1009768 . - . ID=Thaps22248.4;Parent=Thaps22248;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1009791 1009795 . - 0 ID=Thaps22248;Parent=Thaps22248;rank=3 chr4 . exon 1009791 1009795 . - . ID=Thaps22248.3;Parent=Thaps22248;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1009873 1010116 . - 0 ID=Thaps22248;Parent=Thaps22248;rank=2 chr4 . exon 1009873 1010116 . - . ID=Thaps22248.2;Parent=Thaps22248;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1010207 1010617 . - 0 ID=Thaps22248;Parent=Thaps22248;rank=1 chr4 . exon 1010207 1010617 . - . ID=Thaps22248.1;Parent=Thaps22248;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1013260 1014486 . - . ID=Thaps22249;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ98];external_name=Thaps22249;logic_name=jgi_thaps3 chr4 ensembl transcript 1013260 1014486 . - . ID=Thaps22249;Parent=Thaps22249;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1013260 1014486 . - 0 ID=Thaps22249;Parent=Thaps22249;rank=1 chr4 . exon 1013260 1014486 . - . ID=Thaps22249.1;Parent=Thaps22249;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1011402 1013202 . + . ID=Thaps4433;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ97];external_name=Thaps4433;logic_name=jgi_thaps3 chr4 ensembl transcript 1011402 1013202 . + . ID=Thaps4433;Parent=Thaps4433;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1011402 1011424 . + 0 ID=Thaps4433;Parent=Thaps4433;rank=1 chr4 . exon 1011402 1011424 . + . ID=Thaps4433.1;Parent=Thaps4433;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1011516 1011859 . + 0 ID=Thaps4433;Parent=Thaps4433;rank=2 chr4 . exon 1011516 1011859 . + . ID=Thaps4433.2;Parent=Thaps4433;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1011926 1013202 . + 0 ID=Thaps4433;Parent=Thaps4433;rank=3 chr4 . exon 1011926 1013202 . + . ID=Thaps4433.3;Parent=Thaps4433;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1020171 1021334 . + . ID=Thaps22251;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZA0];external_name=Thaps22251;logic_name=jgi_thaps3 chr4 ensembl transcript 1020171 1021334 . + . ID=Thaps22251;Parent=Thaps22251;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1020171 1020538 . + 0 ID=Thaps22251;Parent=Thaps22251;rank=1 chr4 . exon 1020171 1020538 . + . ID=Thaps22251.1;Parent=Thaps22251;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1020656 1021334 . + 0 ID=Thaps22251;Parent=Thaps22251;rank=2 chr4 . exon 1020656 1021334 . + . ID=Thaps22251.2;Parent=Thaps22251;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1017272 1017724 . + . ID=Thaps33929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZ99];external_name=Thaps33929;logic_name=jgi_thaps3 chr4 ensembl transcript 1017272 1017724 . + . ID=Thaps33929;Parent=Thaps33929;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1017272 1017429 . + 0 ID=Thaps33929;Parent=Thaps33929;rank=1 chr4 . exon 1017272 1017429 . + . ID=Thaps33929.1;Parent=Thaps33929;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1017517 1017724 . + 0 ID=Thaps33929;Parent=Thaps33929;rank=2 chr4 . exon 1017517 1017724 . + . ID=Thaps33929.2;Parent=Thaps33929;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1021479 1024157 . - . ID=Thaps4438;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZA1];external_name=Thaps4438;logic_name=jgi_thaps3 chr4 ensembl transcript 1021479 1024157 . - . ID=Thaps4438;Parent=Thaps4438;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1021479 1024157 . - 0 ID=Thaps4438;Parent=Thaps4438;rank=1 chr4 . exon 1021479 1024157 . - . ID=Thaps4438.1;Parent=Thaps4438;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1024579 1027941 . - . ID=Thaps4439;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZA2];external_name=Thaps4439;logic_name=jgi_thaps3 chr4 ensembl transcript 1024579 1027941 . - . ID=Thaps4439;Parent=Thaps4439;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1024579 1026014 . - 0 ID=Thaps4439;Parent=Thaps4439;rank=5 chr4 . exon 1024579 1026014 . - . ID=Thaps4439.5;Parent=Thaps4439;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1026105 1026585 . - 0 ID=Thaps4439;Parent=Thaps4439;rank=4 chr4 . exon 1026105 1026585 . - . ID=Thaps4439.4;Parent=Thaps4439;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1026670 1026767 . - 0 ID=Thaps4439;Parent=Thaps4439;rank=3 chr4 . exon 1026670 1026767 . - . ID=Thaps4439.3;Parent=Thaps4439;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1026855 1027308 . - 0 ID=Thaps4439;Parent=Thaps4439;rank=2 chr4 . CDS 1027414 1027941 . - 0 ID=Thaps4439;Parent=Thaps4439;rank=1 chr4 . repeat_region 1033265 1033302 . ? . description=trf chr4 . repeat_region 1033283 1033302 . ? . description=dust chr4 ensembl protein_coding_gene 1033668 1038980 . + . ID=Thaps22252;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZA5];external_name=Thaps22252;logic_name=jgi_thaps3 chr4 ensembl transcript 1033668 1038980 . + . ID=Thaps22252;Parent=Thaps22252;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1033668 1038980 . + 0 ID=Thaps22252;Parent=Thaps22252;rank=1 chr4 . exon 1033668 1038980 . + . ID=Thaps22252.1;Parent=Thaps22252;constitutive=1;rank=1 chr4 . exon 1026855 1027308 . - . ID=Thaps4439.2;Parent=Thaps4439;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 1027414 1027941 . - . ID=Thaps4439.1;Parent=Thaps4439;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1028241 1031022 . + . ID=Thaps4440;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZA3];external_name=Thaps4440;logic_name=jgi_thaps3 chr4 ensembl transcript 1028241 1031022 . + . ID=Thaps4440;Parent=Thaps4440;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1028241 1028759 . + 0 ID=Thaps4440;Parent=Thaps4440;rank=1 chr4 . exon 1028241 1028759 . + . ID=Thaps4440.1;Parent=Thaps4440;constitutive=1;rank=1 chr4 . CDS 1028782 1029560 . + 0 ID=Thaps4440;Parent=Thaps4440;rank=2 chr4 . exon 1028782 1029560 . + . ID=Thaps4440.2;Parent=Thaps4440;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1029686 1029804 . + 0 ID=Thaps4440;Parent=Thaps4440;rank=3 chr4 . exon 1029686 1029804 . + . ID=Thaps4440.3;Parent=Thaps4440;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1029889 1030200 . + 0 ID=Thaps4440;Parent=Thaps4440;rank=4 chr4 . exon 1029889 1030200 . + . ID=Thaps4440.4;Parent=Thaps4440;constitutive=1;rank=4 chr4 . CDS 1030288 1030334 . + 0 ID=Thaps4440;Parent=Thaps4440;rank=5 chr4 . exon 1030288 1030334 . + . ID=Thaps4440.5;Parent=Thaps4440;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1030429 1031022 . + 0 ID=Thaps4440;Parent=Thaps4440;rank=6 chr4 . exon 1030429 1031022 . + . ID=Thaps4440.6;Parent=Thaps4440;constitutive=1;rank=6 chr4 ensembl protein_coding_gene 1031124 1033461 . - . ID=Thaps4441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZA4];external_name=Thaps4441;logic_name=jgi_thaps3 chr4 ensembl transcript 1031124 1033461 . - . ID=Thaps4441;Parent=Thaps4441;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1031124 1031971 . - 0 ID=Thaps4441;Parent=Thaps4441;rank=2 chr4 . exon 1031124 1031971 . - . ID=Thaps4441.2;Parent=Thaps4441;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1032054 1033461 . - 0 ID=Thaps4441;Parent=Thaps4441;rank=1 chr4 . exon 1032054 1033461 . - . ID=Thaps4441.1;Parent=Thaps4441;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1039088 1042232 . - . ID=Thaps22253;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZA6];external_name=Thaps22253;logic_name=jgi_thaps3 chr4 ensembl transcript 1039088 1042232 . - . ID=Thaps22253;Parent=Thaps22253;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1039088 1039495 . - 0 ID=Thaps22253;Parent=Thaps22253;rank=3 chr4 . exon 1039088 1039495 . - . ID=Thaps22253.3;Parent=Thaps22253;constitutive=1;rank=3 chr4 . CDS 1039608 1041185 . - 0 ID=Thaps22253;Parent=Thaps22253;rank=2 chr4 . exon 1039608 1041185 . - . ID=Thaps22253.2;Parent=Thaps22253;constitutive=1;rank=2 chr4 . CDS 1041339 1042232 . - 0 ID=Thaps22253;Parent=Thaps22253;rank=1 chr4 . exon 1041339 1042232 . - . ID=Thaps22253.1;Parent=Thaps22253;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1042923 1043324 . - . ID=Thaps40293;biotype=protein_coding;description=Thioredoxin [Source:UniProtKB/TrEMBL%3BAcc:B8BZA7];external_name=Thaps40293;logic_name=jgi_thaps3 chr4 ensembl transcript 1042923 1043324 . - . ID=Thaps40293;Parent=Thaps40293;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1042923 1043324 . - 0 ID=Thaps40293;Parent=Thaps40293;rank=1 chr4 . exon 1042923 1043324 . - . ID=Thaps40293.1;Parent=Thaps40293;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1043899 1047799 . + . ID=Thaps4445;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZA8];external_name=Thaps4445;logic_name=jgi_thaps3 chr4 ensembl transcript 1043899 1047799 . + . ID=Thaps4445;Parent=Thaps4445;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1043899 1047696 . + 0 ID=Thaps4445;Parent=Thaps4445;rank=1 chr4 . exon 1043899 1047696 . + . ID=Thaps4445.1;Parent=Thaps4445;constitutive=1;rank=1 chr4 . CDS 1047782 1047799 . + 0 ID=Thaps4445;Parent=Thaps4445;rank=2 chr4 ensembl protein_coding_gene 1048037 1049852 . - . ID=Thaps13021;biotype=protein_coding;description=Probable amp deaminase [Source:UniProtKB/TrEMBL%3BAcc:B8BZA9];external_name=Thaps13021;logic_name=jgi_thaps3 chr4 ensembl transcript 1048037 1049852 . - . ID=Thaps13021;Parent=Thaps13021;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1048037 1048260 . - 0 ID=Thaps13021;Parent=Thaps13021;rank=4 chr4 . exon 1048037 1048260 . - . ID=Thaps13021.4;Parent=Thaps13021;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1048341 1048494 . - 0 ID=Thaps13021;Parent=Thaps13021;rank=3 chr4 . exon 1048341 1048494 . - . ID=Thaps13021.3;Parent=Thaps13021;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1048567 1048836 . - 0 ID=Thaps13021;Parent=Thaps13021;rank=2 chr4 . exon 1048567 1048836 . - . ID=Thaps13021.2;Parent=Thaps13021;constitutive=1;rank=2 chr4 . CDS 1048911 1049852 . - 0 ID=Thaps13021;Parent=Thaps13021;rank=1 chr4 . exon 1048911 1049852 . - . ID=Thaps13021.1;Parent=Thaps13021;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1056114 1057638 . + . ID=Thaps22257;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB3];external_name=Thaps22257;logic_name=jgi_thaps3 chr4 ensembl transcript 1056114 1057638 . + . ID=Thaps22257;Parent=Thaps22257;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1056114 1056932 . + 0 ID=Thaps22257;Parent=Thaps22257;rank=1 chr4 . exon 1056114 1056932 . + . ID=Thaps22257.1;Parent=Thaps22257;constitutive=1;rank=1 chr4 . CDS 1057067 1057459 . + 0 ID=Thaps22257;Parent=Thaps22257;rank=2 chr4 . CDS 1057564 1057638 . + 0 ID=Thaps22257;Parent=Thaps22257;rank=3 chr4 ensembl protein_coding_gene 1051549 1052137 . + . ID=Thaps262163;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB0];external_name=Thaps262163;logic_name=jgi_thaps3 chr4 ensembl transcript 1051549 1052137 . + . ID=Thaps262163;Parent=Thaps262163;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1051549 1052137 . + 0 ID=Thaps262163;Parent=Thaps262163;rank=1 chr4 . exon 1051549 1052137 . + . ID=Thaps262163.1;Parent=Thaps262163;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1054610 1055554 . - . ID=Thaps33915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB2];external_name=Thaps33915;logic_name=jgi_thaps3 chr4 ensembl transcript 1054610 1055554 . - . ID=Thaps33915;Parent=Thaps33915;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1054610 1055554 . - 0 ID=Thaps33915;Parent=Thaps33915;rank=1 chr4 . exon 1054610 1055554 . - . ID=Thaps33915.1;Parent=Thaps33915;constitutive=1;rank=1 chr4 . exon 1047782 1047799 . + . ID=Thaps4445.2;Parent=Thaps4445;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1053041 1054543 . + . ID=Thaps4448;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB1];external_name=Thaps4448;logic_name=jgi_thaps3 chr4 ensembl transcript 1053041 1054543 . + . ID=Thaps4448;Parent=Thaps4448;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1053041 1054543 . + 0 ID=Thaps4448;Parent=Thaps4448;rank=1 chr4 . exon 1053041 1054543 . + . ID=Thaps4448.1;Parent=Thaps4448;constitutive=1;rank=1 chr4 . repeat_region 1060107 1060147 . ? . description=trf chr4 . repeat_region 1063756 1063763 . ? . description=dust chr4 . repeat_region 1063958 1063979 . ? . description=trf chr4 . repeat_region 1063958 1063980 . ? . description=dust chr4 ensembl protein_coding_gene 1061783 1062424 . - . ID=Thaps17095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB6];external_name=Thaps17095;logic_name=jgi_thaps3 chr4 ensembl transcript 1061783 1062424 . - . ID=Thaps17095;Parent=Thaps17095;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1061783 1062196 . - 0 ID=Thaps17095;Parent=Thaps17095;rank=2 chr4 . exon 1061783 1062196 . - . ID=Thaps17095.2;Parent=Thaps17095;constitutive=1;rank=2 chr4 . CDS 1062302 1062424 . - 0 ID=Thaps17095;Parent=Thaps17095;rank=1 chr4 . exon 1062302 1062424 . - . ID=Thaps17095.1;Parent=Thaps17095;constitutive=1;rank=1 chr4 . exon 1057067 1057459 . + . ID=Thaps22257.2;Parent=Thaps22257;constitutive=1;rank=2 chr4 . exon 1057564 1057638 . + . ID=Thaps22257.3;Parent=Thaps22257;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 1057999 1060026 . - . ID=Thaps22258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB4];external_name=Thaps22258;logic_name=jgi_thaps3 chr4 ensembl transcript 1057999 1060026 . - . ID=Thaps22258;Parent=Thaps22258;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1057999 1058155 . - 0 ID=Thaps22258;Parent=Thaps22258;rank=3 chr4 . exon 1057999 1058155 . - . ID=Thaps22258.3;Parent=Thaps22258;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1058183 1059395 . - 0 ID=Thaps22258;Parent=Thaps22258;rank=2 chr4 . exon 1058183 1059395 . - . ID=Thaps22258.2;Parent=Thaps22258;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1059537 1060026 . - 0 ID=Thaps22258;Parent=Thaps22258;rank=1 chr4 . exon 1059537 1060026 . - . ID=Thaps22258.1;Parent=Thaps22258;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1060283 1061491 . + . ID=Thaps4452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB5];external_name=Thaps4452;logic_name=jgi_thaps3 chr4 ensembl transcript 1060283 1061491 . + . ID=Thaps4452;Parent=Thaps4452;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1060283 1061491 . + 0 ID=Thaps4452;Parent=Thaps4452;rank=1 chr4 . exon 1060283 1061491 . + . ID=Thaps4452.1;Parent=Thaps4452;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1064333 1065359 . - . ID=Thaps4454;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB7];external_name=Thaps4454;logic_name=jgi_thaps3 chr4 ensembl transcript 1064333 1065359 . - . ID=Thaps4454;Parent=Thaps4454;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1064333 1064475 . - 0 ID=Thaps4454;Parent=Thaps4454;rank=2 chr4 . exon 1064333 1064475 . - . ID=Thaps4454.2;Parent=Thaps4454;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1064561 1065359 . - 0 ID=Thaps4454;Parent=Thaps4454;rank=1 chr4 . exon 1064561 1065359 . - . ID=Thaps4454.1;Parent=Thaps4454;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1065637 1069212 . - . ID=Thaps4455;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB8];external_name=Thaps4455;logic_name=jgi_thaps3 chr4 ensembl transcript 1065637 1069212 . - . ID=Thaps4455;Parent=Thaps4455;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1065637 1069212 . - 0 ID=Thaps4455;Parent=Thaps4455;rank=1 chr4 . exon 1065637 1069212 . - . ID=Thaps4455.1;Parent=Thaps4455;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1075228 1075806 . - . ID=Thaps22261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZC1];external_name=Thaps22261;logic_name=jgi_thaps3 chr4 ensembl transcript 1075228 1075806 . - . ID=Thaps22261;Parent=Thaps22261;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1075228 1075806 . - 0 ID=Thaps22261;Parent=Thaps22261;rank=1 chr4 . exon 1075228 1075806 . - . ID=Thaps22261.1;Parent=Thaps22261;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1071771 1073572 . - . ID=Thaps268687;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZC0];external_name=Thaps268687;logic_name=jgi_thaps3 chr4 ensembl transcript 1071771 1073572 . - . ID=Thaps268687;Parent=Thaps268687;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1071771 1072017 . - 0 ID=Thaps268687;Parent=Thaps268687;rank=7 chr4 . exon 1071771 1072017 . - . ID=Thaps268687.7;Parent=Thaps268687;constitutive=1;ensembl_end_phase=1;rank=7 chr4 . CDS 1072105 1072171 . - 0 ID=Thaps268687;Parent=Thaps268687;rank=6 chr4 . exon 1072105 1072171 . - . ID=Thaps268687.6;Parent=Thaps268687;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 1072248 1072921 . - 0 ID=Thaps268687;Parent=Thaps268687;rank=5 chr4 . exon 1072248 1072921 . - . ID=Thaps268687.5;Parent=Thaps268687;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1073001 1073085 . - 0 ID=Thaps268687;Parent=Thaps268687;rank=4 chr4 . exon 1073001 1073085 . - . ID=Thaps268687.4;Parent=Thaps268687;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1073158 1073212 . - 0 ID=Thaps268687;Parent=Thaps268687;rank=3 chr4 . exon 1073158 1073212 . - . ID=Thaps268687.3;Parent=Thaps268687;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1073270 1073385 . - 0 ID=Thaps268687;Parent=Thaps268687;rank=2 chr4 . exon 1073270 1073385 . - . ID=Thaps268687.2;Parent=Thaps268687;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1073476 1073572 . - 0 ID=Thaps268687;Parent=Thaps268687;rank=1 chr4 . exon 1073476 1073572 . - . ID=Thaps268687.1;Parent=Thaps268687;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1076639 1078120 . + . ID=Thaps27873;biotype=protein_coding;description=Inosine-5'-monophosphate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BZC2];external_name=Thaps27873;logic_name=jgi_thaps3 chr4 ensembl transcript 1076639 1078120 . + . ID=Thaps27873;Parent=Thaps27873;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1076639 1078120 . + 0 ID=Thaps27873;Parent=Thaps27873;rank=1 chr4 . exon 1076639 1078120 . + . ID=Thaps27873.1;Parent=Thaps27873;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1069583 1071646 . + . ID=Thaps4456;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZB9];external_name=Thaps4456;logic_name=jgi_thaps3 chr4 ensembl transcript 1069583 1071646 . + . ID=Thaps4456;Parent=Thaps4456;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1069583 1070286 . + 0 ID=Thaps4456;Parent=Thaps4456;rank=1 chr4 . exon 1069583 1070286 . + . ID=Thaps4456.1;Parent=Thaps4456;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1070658 1071566 . + 0 ID=Thaps4456;Parent=Thaps4456;rank=2 chr4 . exon 1070658 1071566 . + . ID=Thaps4456.2;Parent=Thaps4456;constitutive=1;rank=2 chr4 . CDS 1071610 1071646 . + 0 ID=Thaps4456;Parent=Thaps4456;rank=3 chr4 . exon 1071610 1071646 . + . ID=Thaps4456.3;Parent=Thaps4456;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl tRNA_gene 1078353 1078424 . + . ID=EPrTPOG00000000048;biotype=tRNA;description=tRNA-Pro for anticodon AGG [Source:TRNASCAN_SE%3BAcc:tRNA-Pro];external_name=tRNA-Pro;logic_name=ncrna_eg chr4 ensembl transcript 1078353 1078424 . + . ID=EPrTPOT00000000048;Parent=EPrTPOG00000000048;biotype=tRNA;logic_name=ncrna_eg chr4 . exon 1078353 1078424 . + . ID=EPrTPOE00000000048;Parent=EPrTPOT00000000048;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1080328 1083101 . - . ID=Thaps268689;biotype=protein_coding;description=Potential RNA bindin g protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZC4];external_name=Thaps268689;logic_name=jgi_thaps3 chr4 ensembl transcript 1080328 1083101 . - . ID=Thaps268689;Parent=Thaps268689;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1080328 1082784 . - 0 ID=Thaps268689;Parent=Thaps268689;rank=2 chr4 . exon 1080328 1082784 . - . ID=Thaps268689.2;Parent=Thaps268689;constitutive=1;rank=2 chr4 . CDS 1082898 1083101 . - 0 ID=Thaps268689;Parent=Thaps268689;rank=1 chr4 . exon 1082898 1083101 . - . ID=Thaps268689.1;Parent=Thaps268689;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1078918 1080261 . + . ID=Thaps4460;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZC3];external_name=Thaps4460;logic_name=jgi_thaps3 chr4 ensembl transcript 1078918 1080261 . + . ID=Thaps4460;Parent=Thaps4460;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1078918 1080261 . + 0 ID=Thaps4460;Parent=Thaps4460;rank=1 chr4 . exon 1078918 1080261 . + . ID=Thaps4460.1;Parent=Thaps4460;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1083285 1084414 . + . ID=Thaps4462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZC5];external_name=Thaps4462;logic_name=jgi_thaps3 chr4 ensembl transcript 1083285 1084414 . + . ID=Thaps4462;Parent=Thaps4462;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1083285 1083509 . + 0 ID=Thaps4462;Parent=Thaps4462;rank=1 chr4 . exon 1083285 1083509 . + . ID=Thaps4462.1;Parent=Thaps4462;constitutive=1;rank=1 chr4 . CDS 1083644 1084414 . + 0 ID=Thaps4462;Parent=Thaps4462;rank=2 chr4 . exon 1083644 1084414 . + . ID=Thaps4462.2;Parent=Thaps4462;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1084552 1085388 . + . ID=Thaps4463;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZC6];external_name=Thaps4463;logic_name=jgi_thaps3 chr4 ensembl transcript 1084552 1085388 . + . ID=Thaps4463;Parent=Thaps4463;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1084552 1085388 . + 0 ID=Thaps4463;Parent=Thaps4463;rank=1 chr4 . exon 1084552 1085388 . + . ID=Thaps4463.1;Parent=Thaps4463;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1086698 1090154 . + . ID=Thaps22265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZC7];external_name=Thaps22265;logic_name=jgi_thaps3 chr4 ensembl transcript 1086698 1090154 . + . ID=Thaps22265;Parent=Thaps22265;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1086698 1088122 . + 0 ID=Thaps22265;Parent=Thaps22265;rank=1 chr4 . exon 1086698 1088122 . + . ID=Thaps22265.1;Parent=Thaps22265;constitutive=1;rank=1 chr4 . CDS 1088219 1089112 . + 0 ID=Thaps22265;Parent=Thaps22265;rank=2 chr4 . exon 1088219 1089112 . + . ID=Thaps22265.2;Parent=Thaps22265;constitutive=1;rank=2 chr4 . CDS 1089213 1090154 . + 0 ID=Thaps22265;Parent=Thaps22265;rank=3 chr4 . exon 1089213 1090154 . + . ID=Thaps22265.3;Parent=Thaps22265;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 1090208 1091731 . - . ID=Thaps4465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZC8];external_name=Thaps4465;logic_name=jgi_thaps3 chr4 ensembl transcript 1090208 1091731 . - . ID=Thaps4465;Parent=Thaps4465;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1090208 1091731 . - 0 ID=Thaps4465;Parent=Thaps4465;rank=1 chr4 . exon 1090208 1091731 . - . ID=Thaps4465.1;Parent=Thaps4465;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1092281 1093217 . + . ID=Thaps4466;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZC9];external_name=Thaps4466;logic_name=jgi_thaps3 chr4 ensembl transcript 1092281 1093217 . + . ID=Thaps4466;Parent=Thaps4466;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1092281 1092708 . + 0 ID=Thaps4466;Parent=Thaps4466;rank=1 chr4 . exon 1092281 1092708 . + . ID=Thaps4466.1;Parent=Thaps4466;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1092830 1093217 . + 0 ID=Thaps4466;Parent=Thaps4466;rank=2 chr4 . exon 1092830 1093217 . + . ID=Thaps4466.2;Parent=Thaps4466;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1093796 1101989 . + . ID=Thaps4467;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZD0];external_name=Thaps4467;logic_name=jgi_thaps3 chr4 ensembl transcript 1093796 1101989 . + . ID=Thaps4467;Parent=Thaps4467;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1093796 1093833 . + 0 ID=Thaps4467;Parent=Thaps4467;rank=1 chr4 . exon 1093796 1093833 . + . ID=Thaps4467.1;Parent=Thaps4467;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1093908 1096152 . + 0 ID=Thaps4467;Parent=Thaps4467;rank=2 chr4 . exon 1093908 1096152 . + . ID=Thaps4467.2;Parent=Thaps4467;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1096238 1098709 . + 0 ID=Thaps4467;Parent=Thaps4467;rank=3 chr4 . exon 1096238 1098709 . + . ID=Thaps4467.3;Parent=Thaps4467;constitutive=1;rank=3 chr4 . CDS 1098785 1101884 . + 0 ID=Thaps4467;Parent=Thaps4467;rank=4 chr4 . CDS 1101910 1101989 . + 0 ID=Thaps4467;Parent=Thaps4467;rank=5 chr4 ensembl protein_coding_gene 1102337 1105724 . - . ID=Thaps22266;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZD1];external_name=Thaps22266;logic_name=jgi_thaps3 chr4 ensembl transcript 1102337 1105724 . - . ID=Thaps22266;Parent=Thaps22266;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1102337 1102455 . - 0 ID=Thaps22266;Parent=Thaps22266;rank=5 chr4 . exon 1102337 1102455 . - . ID=Thaps22266.5;Parent=Thaps22266;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1102540 1102822 . - 0 ID=Thaps22266;Parent=Thaps22266;rank=4 chr4 . exon 1102540 1102822 . - . ID=Thaps22266.4;Parent=Thaps22266;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1102905 1103516 . - 0 ID=Thaps22266;Parent=Thaps22266;rank=3 chr4 . exon 1102905 1103516 . - . ID=Thaps22266.3;Parent=Thaps22266;constitutive=1;rank=3 chr4 . CDS 1103604 1105455 . - 0 ID=Thaps22266;Parent=Thaps22266;rank=2 chr4 . exon 1103604 1105455 . - . ID=Thaps22266.2;Parent=Thaps22266;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1105558 1105724 . - 0 ID=Thaps22266;Parent=Thaps22266;rank=1 chr4 . exon 1105558 1105724 . - . ID=Thaps22266.1;Parent=Thaps22266;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1106180 1107278 . - . ID=Thaps33670;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZD2];external_name=Thaps33670;logic_name=jgi_thaps3 chr4 ensembl transcript 1106180 1107278 . - . ID=Thaps33670;Parent=Thaps33670;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1106180 1106343 . - 0 ID=Thaps33670;Parent=Thaps33670;rank=2 chr4 . exon 1106180 1106343 . - . ID=Thaps33670.2;Parent=Thaps33670;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1106435 1107278 . - 0 ID=Thaps33670;Parent=Thaps33670;rank=1 chr4 . exon 1106435 1107278 . - . ID=Thaps33670.1;Parent=Thaps33670;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 1098785 1101884 . + . ID=Thaps4467.4;Parent=Thaps4467;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . exon 1101910 1101989 . + . ID=Thaps4467.5;Parent=Thaps4467;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . repeat_region 1113507 1113514 . ? . description=dust chr4 ensembl protein_coding_gene 1116118 1122501 . - . ID=Thaps22269;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZD4];external_name=Thaps22269;logic_name=jgi_thaps3 chr4 ensembl transcript 1116118 1122501 . - . ID=Thaps22269;Parent=Thaps22269;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1116118 1116463 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=10 chr4 . exon 1116118 1116463 . - . ID=Thaps22269.10;Parent=Thaps22269;constitutive=1;ensembl_end_phase=1;rank=10 chr4 . CDS 1116572 1116937 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=9 chr4 . CDS 1117012 1117394 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=8 chr4 . CDS 1117474 1117866 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=7 chr4 . CDS 1117957 1118127 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=6 chr4 . CDS 1118206 1118838 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=5 chr4 . CDS 1119110 1119669 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=4 chr4 . CDS 1119721 1120089 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=3 chr4 . CDS 1120215 1121921 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=2 chr4 . CDS 1121967 1122501 . - 0 ID=Thaps22269;Parent=Thaps22269;rank=1 chr4 ensembl protein_coding_gene 1108986 1111286 . - . ID=Thaps4470;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZD3];external_name=Thaps4470;logic_name=jgi_thaps3 chr4 ensembl transcript 1108986 1111286 . - . ID=Thaps4470;Parent=Thaps4470;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1108986 1109561 . - 0 ID=Thaps4470;Parent=Thaps4470;rank=3 chr4 . exon 1108986 1109561 . - . ID=Thaps4470.3;Parent=Thaps4470;constitutive=1;rank=3 chr4 . CDS 1109635 1109737 . - 0 ID=Thaps4470;Parent=Thaps4470;rank=2 chr4 . exon 1109635 1109737 . - . ID=Thaps4470.2;Parent=Thaps4470;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1109827 1111286 . - 0 ID=Thaps4470;Parent=Thaps4470;rank=1 chr4 . exon 1109827 1111286 . - . ID=Thaps4470.1;Parent=Thaps4470;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . exon 1116572 1116937 . - . ID=Thaps22269.9;Parent=Thaps22269;constitutive=1;rank=9 chr4 . exon 1117012 1117394 . - . ID=Thaps22269.8;Parent=Thaps22269;constitutive=1;ensembl_end_phase=2;rank=8 chr4 . exon 1117474 1117866 . - . ID=Thaps22269.7;Parent=Thaps22269;constitutive=1;rank=7 chr4 . exon 1117957 1118127 . - . ID=Thaps22269.6;Parent=Thaps22269;constitutive=1;rank=6 chr4 . exon 1118206 1118838 . - . ID=Thaps22269.5;Parent=Thaps22269;constitutive=1;rank=5 chr4 . exon 1119110 1119669 . - . ID=Thaps22269.4;Parent=Thaps22269;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . exon 1119721 1120089 . - . ID=Thaps22269.3;Parent=Thaps22269;constitutive=1;rank=3 chr4 . exon 1120215 1121921 . - . ID=Thaps22269.2;Parent=Thaps22269;constitutive=1;rank=2 chr4 . exon 1121967 1122501 . - . ID=Thaps22269.1;Parent=Thaps22269;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1123988 1124302 . - . ID=Thaps33417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZD5];external_name=Thaps33417;logic_name=jgi_thaps3 chr4 ensembl transcript 1123988 1124302 . - . ID=Thaps33417;Parent=Thaps33417;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1123988 1124302 . - 0 ID=Thaps33417;Parent=Thaps33417;rank=1 chr4 . exon 1123988 1124302 . - . ID=Thaps33417.1;Parent=Thaps33417;constitutive=1;rank=1 chr4 ensembl gene 1126751 1127727 . + . ID=Thaps262171;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr4 ensembl transcript 1126751 1127727 . + . ID=Thaps262171;Parent=Thaps262171;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr4 . exon 1126751 1127282 . + . ID=Thaps262171.1;Parent=Thaps262171;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 1127392 1127727 . + . ID=Thaps262171.2;Parent=Thaps262171;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1133252 1136209 . - . ID=Thaps33558;biotype=protein_coding;description=Protein translocase subunit secA [Source:UniProtKB/TrEMBL%3BAcc:B8BZD8];external_name=Thaps33558;logic_name=jgi_thaps3 chr4 ensembl transcript 1133252 1136209 . - . ID=Thaps33558;Parent=Thaps33558;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1133252 1134925 . - 0 ID=Thaps33558;Parent=Thaps33558;rank=3 chr4 . exon 1133252 1134925 . - . ID=Thaps33558.3;Parent=Thaps33558;constitutive=1;rank=3 chr4 . CDS 1135009 1135891 . - 0 ID=Thaps33558;Parent=Thaps33558;rank=2 chr4 . exon 1135009 1135891 . - . ID=Thaps33558.2;Parent=Thaps33558;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1135983 1136209 . - 0 ID=Thaps33558;Parent=Thaps33558;rank=1 chr4 . exon 1135983 1136209 . - . ID=Thaps33558.1;Parent=Thaps33558;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1127898 1128972 . + . ID=Thaps33984;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZD6];external_name=Thaps33984;logic_name=jgi_thaps3 chr4 ensembl transcript 1127898 1128972 . + . ID=Thaps33984;Parent=Thaps33984;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1127898 1128368 . + 0 ID=Thaps33984;Parent=Thaps33984;rank=1 chr4 . exon 1127898 1128368 . + . ID=Thaps33984.1;Parent=Thaps33984;constitutive=1;rank=1 chr4 . CDS 1128455 1128550 . + 0 ID=Thaps33984;Parent=Thaps33984;rank=2 chr4 . exon 1128455 1128550 . + . ID=Thaps33984.2;Parent=Thaps33984;constitutive=1;rank=2 chr4 . CDS 1128643 1128972 . + 0 ID=Thaps33984;Parent=Thaps33984;rank=3 chr4 . exon 1128643 1128972 . + . ID=Thaps33984.3;Parent=Thaps33984;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 1132214 1132989 . - . ID=Thaps40312;biotype=protein_coding;description=RS16%2C ribosomal protein 16 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BZD7];external_name=RS16;logic_name=jgi_thaps3 chr4 ensembl transcript 1132214 1132989 . - . ID=Thaps40312;Parent=Thaps40312;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1132214 1132610 . - 0 ID=Thaps40312;Parent=Thaps40312;rank=2 chr4 . exon 1132214 1132610 . - . ID=Thaps40312.2;Parent=Thaps40312;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1132955 1132989 . - 0 ID=Thaps40312;Parent=Thaps40312;rank=1 chr4 . exon 1132955 1132989 . - . ID=Thaps40312.1;Parent=Thaps40312;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . repeat_region 1136689 1136703 . ? . description=dust chr4 . repeat_region 1140216 1140240 . ? . description=dust chr4 . repeat_region 1144614 1144635 . ? . description=trf chr4 ensembl protein_coding_gene 1137757 1139382 . - . ID=Thaps22272;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZE0];external_name=Thaps22272;logic_name=jgi_thaps3 chr4 ensembl transcript 1137757 1139382 . - . ID=Thaps22272;Parent=Thaps22272;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1137757 1139382 . - 0 ID=Thaps22272;Parent=Thaps22272;rank=1 chr4 . exon 1137757 1139382 . - . ID=Thaps22272.1;Parent=Thaps22272;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1141580 1143120 . - . ID=Thaps268695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZE2];external_name=Thaps268695;logic_name=jgi_thaps3 chr4 ensembl transcript 1141580 1143120 . - . ID=Thaps268695;Parent=Thaps268695;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1141580 1142208 . - 0 ID=Thaps268695;Parent=Thaps268695;rank=3 chr4 . exon 1141580 1142208 . - . ID=Thaps268695.3;Parent=Thaps268695;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1142286 1142352 . - 0 ID=Thaps268695;Parent=Thaps268695;rank=2 chr4 . exon 1142286 1142352 . - . ID=Thaps268695.2;Parent=Thaps268695;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1142449 1143120 . - 0 ID=Thaps268695;Parent=Thaps268695;rank=1 chr4 . exon 1142449 1143120 . - . ID=Thaps268695.1;Parent=Thaps268695;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1136908 1137462 . + . ID=Thaps33480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZD9];external_name=Thaps33480;logic_name=jgi_thaps3 chr4 ensembl transcript 1136908 1137462 . + . ID=Thaps33480;Parent=Thaps33480;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1136908 1137462 . + 0 ID=Thaps33480;Parent=Thaps33480;rank=1 chr4 . exon 1136908 1137462 . + . ID=Thaps33480.1;Parent=Thaps33480;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1140393 1141346 . + . ID=Thaps33871;biotype=protein_coding;description=Serine threonine protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BZE1];external_name=Thaps33871;logic_name=jgi_thaps3 chr4 ensembl transcript 1140393 1141346 . + . ID=Thaps33871;Parent=Thaps33871;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1140393 1141346 . + 0 ID=Thaps33871;Parent=Thaps33871;rank=1 chr4 . exon 1140393 1141346 . + . ID=Thaps33871.1;Parent=Thaps33871;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1143521 1144426 . - . ID=Thaps4481;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZE3];external_name=Thaps4481;logic_name=jgi_thaps3 chr4 ensembl transcript 1143521 1144426 . - . ID=Thaps4481;Parent=Thaps4481;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1143521 1144426 . - 0 ID=Thaps4481;Parent=Thaps4481;rank=1 chr4 . exon 1143521 1144426 . - . ID=Thaps4481.1;Parent=Thaps4481;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1144991 1146530 . + . ID=Thaps4482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZE4];external_name=Thaps4482;logic_name=jgi_thaps3 chr4 ensembl transcript 1144991 1146530 . + . ID=Thaps4482;Parent=Thaps4482;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1144991 1145941 . + 0 ID=Thaps4482;Parent=Thaps4482;rank=1 chr4 . exon 1144991 1145941 . + . ID=Thaps4482.1;Parent=Thaps4482;constitutive=1;rank=1 chr4 . CDS 1146024 1146530 . + 0 ID=Thaps4482;Parent=Thaps4482;rank=2 chr4 . exon 1146024 1146530 . + . ID=Thaps4482.2;Parent=Thaps4482;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1149312 1150004 . + . ID=Thaps17468;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZE6];external_name=Thaps17468;logic_name=jgi_thaps3 chr4 ensembl transcript 1149312 1150004 . + . ID=Thaps17468;Parent=Thaps17468;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1149312 1149560 . + 0 ID=Thaps17468;Parent=Thaps17468;rank=1 chr4 . exon 1149312 1149560 . + . ID=Thaps17468.1;Parent=Thaps17468;constitutive=1;rank=1 chr4 . CDS 1149663 1149822 . + 0 ID=Thaps17468;Parent=Thaps17468;rank=2 chr4 . exon 1149663 1149822 . + . ID=Thaps17468.2;Parent=Thaps17468;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1149859 1150004 . + 0 ID=Thaps17468;Parent=Thaps17468;rank=3 chr4 . exon 1149859 1150004 . + . ID=Thaps17468.3;Parent=Thaps17468;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1152974 1154209 . - . ID=Thaps22276;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZE8];external_name=Thaps22276;logic_name=jgi_thaps3 chr4 ensembl transcript 1152974 1154209 . - . ID=Thaps22276;Parent=Thaps22276;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1152974 1153100 . - 0 ID=Thaps22276;Parent=Thaps22276;rank=5 chr4 . exon 1152974 1153100 . - . ID=Thaps22276.5;Parent=Thaps22276;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 1153208 1153231 . - 0 ID=Thaps22276;Parent=Thaps22276;rank=4 chr4 . exon 1153208 1153231 . - . ID=Thaps22276.4;Parent=Thaps22276;constitutive=1;rank=4 chr4 . CDS 1153323 1153365 . - 0 ID=Thaps22276;Parent=Thaps22276;rank=3 chr4 . exon 1153323 1153365 . - . ID=Thaps22276.3;Parent=Thaps22276;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1153589 1153861 . - 0 ID=Thaps22276;Parent=Thaps22276;rank=2 chr4 . exon 1153589 1153861 . - . ID=Thaps22276.2;Parent=Thaps22276;constitutive=1;rank=2 chr4 . CDS 1154083 1154209 . - 0 ID=Thaps22276;Parent=Thaps22276;rank=1 chr4 . exon 1154083 1154209 . - . ID=Thaps22276.1;Parent=Thaps22276;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1156174 1161159 . + . ID=Thaps22277;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF0];external_name=Thaps22277;logic_name=jgi_thaps3 chr4 ensembl transcript 1156174 1161159 . + . ID=Thaps22277;Parent=Thaps22277;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1156174 1156219 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=1 chr4 . exon 1156174 1156219 . + . ID=Thaps22277.1;Parent=Thaps22277;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1156325 1156437 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=2 chr4 . exon 1156325 1156437 . + . ID=Thaps22277.2;Parent=Thaps22277;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1156509 1157612 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=3 chr4 . CDS 1157684 1157987 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=4 chr4 . CDS 1158074 1158293 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=5 chr4 . CDS 1158385 1159063 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=6 chr4 . CDS 1159137 1159738 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=7 chr4 . CDS 1159835 1160032 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=8 chr4 . CDS 1160102 1160130 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=9 chr4 . CDS 1160219 1160294 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=10 chr4 . CDS 1160374 1160558 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=11 chr4 . CDS 1160646 1160986 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=12 chr4 . CDS 1161070 1161159 . + 0 ID=Thaps22277;Parent=Thaps22277;rank=13 chr4 ensembl protein_coding_gene 1150758 1152536 . - . ID=Thaps27892;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZE7];external_name=Thaps27892;logic_name=jgi_thaps3 chr4 ensembl transcript 1150758 1152536 . - . ID=Thaps27892;Parent=Thaps27892;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1150758 1151228 . - 0 ID=Thaps27892;Parent=Thaps27892;rank=5 chr4 . exon 1150758 1151228 . - . ID=Thaps27892.5;Parent=Thaps27892;constitutive=1;rank=5 chr4 . CDS 1151310 1151549 . - 0 ID=Thaps27892;Parent=Thaps27892;rank=4 chr4 . exon 1151310 1151549 . - . ID=Thaps27892.4;Parent=Thaps27892;constitutive=1;rank=4 chr4 . CDS 1151640 1152031 . - 0 ID=Thaps27892;Parent=Thaps27892;rank=3 chr4 . exon 1151640 1152031 . - . ID=Thaps27892.3;Parent=Thaps27892;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1152151 1152201 . - 0 ID=Thaps27892;Parent=Thaps27892;rank=2 chr4 . exon 1152151 1152201 . - . ID=Thaps27892.2;Parent=Thaps27892;constitutive=1;rank=2 chr4 . CDS 1152323 1152536 . - 0 ID=Thaps27892;Parent=Thaps27892;rank=1 chr4 . exon 1152323 1152536 . - . ID=Thaps27892.1;Parent=Thaps27892;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1146983 1148380 . - . ID=Thaps4483;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZE5];external_name=Thaps4483;logic_name=jgi_thaps3 chr4 ensembl transcript 1146983 1148380 . - . ID=Thaps4483;Parent=Thaps4483;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1146983 1147686 . - 0 ID=Thaps4483;Parent=Thaps4483;rank=2 chr4 . exon 1146983 1147686 . - . ID=Thaps4483.2;Parent=Thaps4483;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1147732 1148380 . - 0 ID=Thaps4483;Parent=Thaps4483;rank=1 chr4 . exon 1147732 1148380 . - . ID=Thaps4483.1;Parent=Thaps4483;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1154425 1155477 . + . ID=Thaps4487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZE9];external_name=Thaps4487;logic_name=jgi_thaps3 chr4 ensembl transcript 1154425 1155477 . + . ID=Thaps4487;Parent=Thaps4487;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1154425 1154855 . + 0 ID=Thaps4487;Parent=Thaps4487;rank=1 chr4 . exon 1154425 1154855 . + . ID=Thaps4487.1;Parent=Thaps4487;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1155087 1155477 . + 0 ID=Thaps4487;Parent=Thaps4487;rank=2 chr4 . exon 1155087 1155477 . + . ID=Thaps4487.2;Parent=Thaps4487;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . repeat_region 1156723 1156756 . ? . description=trf chr4 . repeat_region 1156723 1156756 . ? . description=dust chr4 . repeat_region 1165840 1165900 . ? . description=dust chr4 . exon 1156509 1157612 . + . ID=Thaps22277.3;Parent=Thaps22277;constitutive=1;rank=3 chr4 . exon 1157684 1157987 . + . ID=Thaps22277.4;Parent=Thaps22277;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . exon 1158074 1158293 . + . ID=Thaps22277.5;Parent=Thaps22277;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . exon 1158385 1159063 . + . ID=Thaps22277.6;Parent=Thaps22277;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . exon 1159137 1159738 . + . ID=Thaps22277.7;Parent=Thaps22277;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . exon 1159835 1160032 . + . ID=Thaps22277.8;Parent=Thaps22277;constitutive=1;rank=8 chr4 . exon 1160102 1160130 . + . ID=Thaps22277.9;Parent=Thaps22277;constitutive=1;ensembl_end_phase=2;rank=9 chr4 . exon 1160219 1160294 . + . ID=Thaps22277.10;Parent=Thaps22277;constitutive=1;ensembl_end_phase=1;rank=10 chr4 . exon 1160374 1160558 . + . ID=Thaps22277.11;Parent=Thaps22277;constitutive=1;ensembl_end_phase=2;rank=11 chr4 . exon 1160646 1160986 . + . ID=Thaps22277.12;Parent=Thaps22277;constitutive=1;ensembl_end_phase=2;rank=12 chr4 . exon 1161070 1161159 . + . ID=Thaps22277.13;Parent=Thaps22277;constitutive=1;rank=13 chr4 ensembl protein_coding_gene 1164113 1165204 . - . ID=Thaps262179;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF1];external_name=Thaps262179;logic_name=jgi_thaps3 chr4 ensembl transcript 1164113 1165204 . - . ID=Thaps262179;Parent=Thaps262179;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1164113 1165204 . - 0 ID=Thaps262179;Parent=Thaps262179;rank=1 chr4 . exon 1164113 1165204 . - . ID=Thaps262179.1;Parent=Thaps262179;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1165862 1166827 . + . ID=Thaps4490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF2];external_name=Thaps4490;logic_name=jgi_thaps3 chr4 ensembl transcript 1165862 1166827 . + . ID=Thaps4490;Parent=Thaps4490;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1165862 1166827 . + 0 ID=Thaps4490;Parent=Thaps4490;rank=1 chr4 . exon 1165862 1166827 . + . ID=Thaps4490.1;Parent=Thaps4490;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1173976 1174908 . - . ID=Thaps22279;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF5];external_name=Thaps22279;logic_name=jgi_thaps3 chr4 ensembl transcript 1173976 1174908 . - . ID=Thaps22279;Parent=Thaps22279;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1173976 1174739 . - 0 ID=Thaps22279;Parent=Thaps22279;rank=2 chr4 . exon 1173976 1174739 . - . ID=Thaps22279.2;Parent=Thaps22279;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1174878 1174908 . - 0 ID=Thaps22279;Parent=Thaps22279;rank=1 chr4 . exon 1174878 1174908 . - . ID=Thaps22279.1;Parent=Thaps22279;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1175715 1176814 . - . ID=Thaps22280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF6];external_name=Thaps22280;logic_name=jgi_thaps3 chr4 ensembl transcript 1175715 1176814 . - . ID=Thaps22280;Parent=Thaps22280;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1175715 1176460 . - 0 ID=Thaps22280;Parent=Thaps22280;rank=2 chr4 . exon 1175715 1176460 . - . ID=Thaps22280.2;Parent=Thaps22280;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1176553 1176814 . - 0 ID=Thaps22280;Parent=Thaps22280;rank=1 chr4 ensembl protein_coding_gene 1171350 1171770 . + . ID=Thaps262180;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF4];external_name=Thaps262180;logic_name=jgi_thaps3 chr4 ensembl transcript 1171350 1171770 . + . ID=Thaps262180;Parent=Thaps262180;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1171350 1171627 . + 0 ID=Thaps262180;Parent=Thaps262180;rank=1 chr4 . exon 1171350 1171627 . + . ID=Thaps262180.1;Parent=Thaps262180;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1171744 1171770 . + 0 ID=Thaps262180;Parent=Thaps262180;rank=2 chr4 . exon 1171744 1171770 . + . ID=Thaps262180.2;Parent=Thaps262180;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1167966 1169069 . - . ID=Thaps4491;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF3];external_name=Thaps4491;logic_name=jgi_thaps3 chr4 ensembl transcript 1167966 1169069 . - . ID=Thaps4491;Parent=Thaps4491;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1167966 1169069 . - 0 ID=Thaps4491;Parent=Thaps4491;rank=1 chr4 . exon 1167966 1169069 . - . ID=Thaps4491.1;Parent=Thaps4491;constitutive=1;rank=1 chr4 . exon 1176553 1176814 . - . ID=Thaps22280.1;Parent=Thaps22280;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1178897 1180251 . + . ID=Thaps22281;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF8];external_name=Thaps22281;logic_name=jgi_thaps3 chr4 ensembl transcript 1178897 1180251 . + . ID=Thaps22281;Parent=Thaps22281;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1178897 1179309 . + 0 ID=Thaps22281;Parent=Thaps22281;rank=1 chr4 . exon 1178897 1179309 . + . ID=Thaps22281.1;Parent=Thaps22281;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1179390 1180251 . + 0 ID=Thaps22281;Parent=Thaps22281;rank=2 chr4 . exon 1179390 1180251 . + . ID=Thaps22281.2;Parent=Thaps22281;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1180661 1182636 . - . ID=Thaps33973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF9];external_name=Thaps33973;logic_name=jgi_thaps3 chr4 ensembl transcript 1180661 1182636 . - . ID=Thaps33973;Parent=Thaps33973;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1180661 1180998 . - 0 ID=Thaps33973;Parent=Thaps33973;rank=4 chr4 . exon 1180661 1180998 . - . ID=Thaps33973.4;Parent=Thaps33973;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1181087 1181407 . - 0 ID=Thaps33973;Parent=Thaps33973;rank=3 chr4 . exon 1181087 1181407 . - . ID=Thaps33973.3;Parent=Thaps33973;constitutive=1;rank=3 chr4 . CDS 1181502 1181868 . - 0 ID=Thaps33973;Parent=Thaps33973;rank=2 chr4 . exon 1181502 1181868 . - . ID=Thaps33973.2;Parent=Thaps33973;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1182166 1182636 . - 0 ID=Thaps33973;Parent=Thaps33973;rank=1 chr4 . exon 1182166 1182636 . - . ID=Thaps33973.1;Parent=Thaps33973;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1183906 1188712 . + . ID=Thaps40323;biotype=protein_coding;description=CPSase [Source:UniProtKB/TrEMBL%3BAcc:B8BZG0];external_name=Thaps40323;logic_name=jgi_thaps3 chr4 ensembl transcript 1183906 1188712 . + . ID=Thaps40323;Parent=Thaps40323;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1183906 1184025 . + 0 ID=Thaps40323;Parent=Thaps40323;rank=1 chr4 . exon 1183906 1184025 . + . ID=Thaps40323.1;Parent=Thaps40323;constitutive=1;rank=1 chr4 . CDS 1184142 1184207 . + 0 ID=Thaps40323;Parent=Thaps40323;rank=2 chr4 . exon 1184142 1184207 . + . ID=Thaps40323.2;Parent=Thaps40323;constitutive=1;rank=2 chr4 . CDS 1184285 1186090 . + 0 ID=Thaps40323;Parent=Thaps40323;rank=3 chr4 . exon 1184285 1186090 . + . ID=Thaps40323.3;Parent=Thaps40323;constitutive=1;rank=3 chr4 . CDS 1186166 1187471 . + 0 ID=Thaps40323;Parent=Thaps40323;rank=4 chr4 . exon 1186166 1187471 . + . ID=Thaps40323.4;Parent=Thaps40323;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1187553 1188712 . + 0 ID=Thaps40323;Parent=Thaps40323;rank=5 chr4 ensembl protein_coding_gene 1177570 1178499 . - . ID=Thaps4495;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZF7];external_name=Thaps4495;logic_name=jgi_thaps3 chr4 ensembl transcript 1177570 1178499 . - . ID=Thaps4495;Parent=Thaps4495;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1177570 1177951 . - 0 ID=Thaps4495;Parent=Thaps4495;rank=2 chr4 . exon 1177570 1177951 . - . ID=Thaps4495.2;Parent=Thaps4495;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1178033 1178499 . - 0 ID=Thaps4495;Parent=Thaps4495;rank=1 chr4 . exon 1178033 1178499 . - . ID=Thaps4495.1;Parent=Thaps4495;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1188857 1189696 . - . ID=Thaps22283;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZG1];external_name=Thaps22283;logic_name=jgi_thaps3 chr4 ensembl transcript 1188857 1189696 . - . ID=Thaps22283;Parent=Thaps22283;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1188857 1189696 . - 0 ID=Thaps22283;Parent=Thaps22283;rank=1 chr4 . exon 1188857 1189696 . - . ID=Thaps22283.1;Parent=Thaps22283;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1190513 1192624 . - . ID=Thaps22284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZG2];external_name=Thaps22284;logic_name=jgi_thaps3 chr4 ensembl transcript 1190513 1192624 . - . ID=Thaps22284;Parent=Thaps22284;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1190513 1192624 . - 0 ID=Thaps22284;Parent=Thaps22284;rank=1 chr4 . exon 1190513 1192624 . - . ID=Thaps22284.1;Parent=Thaps22284;constitutive=1;rank=1 chr4 . exon 1187553 1188712 . + . ID=Thaps40323.5;Parent=Thaps40323;constitutive=1;ensembl_end_phase=2;rank=5 chr4 ensembl protein_coding_gene 1192906 1193753 . + . ID=Thaps4501;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZG3];external_name=Thaps4501;logic_name=jgi_thaps3 chr4 ensembl transcript 1192906 1193753 . + . ID=Thaps4501;Parent=Thaps4501;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1192906 1193063 . + 0 ID=Thaps4501;Parent=Thaps4501;rank=1 chr4 . exon 1192906 1193063 . + . ID=Thaps4501.1;Parent=Thaps4501;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1193213 1193753 . + 0 ID=Thaps4501;Parent=Thaps4501;rank=2 chr4 . exon 1193213 1193753 . + . ID=Thaps4501.2;Parent=Thaps4501;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1194123 1196275 . + . ID=Thaps4502;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZG4];external_name=Thaps4502;logic_name=jgi_thaps3 chr4 ensembl transcript 1194123 1196275 . + . ID=Thaps4502;Parent=Thaps4502;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1194123 1194985 . + 0 ID=Thaps4502;Parent=Thaps4502;rank=1 chr4 . exon 1194123 1194985 . + . ID=Thaps4502.1;Parent=Thaps4502;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1195069 1195429 . + 0 ID=Thaps4502;Parent=Thaps4502;rank=2 chr4 . exon 1195069 1195429 . + . ID=Thaps4502.2;Parent=Thaps4502;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1195511 1196275 . + 0 ID=Thaps4502;Parent=Thaps4502;rank=3 chr4 . exon 1195511 1196275 . + . ID=Thaps4502.3;Parent=Thaps4502;constitutive=1;rank=3 chr4 . repeat_region 1197058 1197087 . ? . description=trf chr4 . repeat_region 1198441 1198488 . ? . description=trf chr4 . repeat_region 1202792 1202861 . + . description=Copia9LTR_TP chr4 . repeat_region 1204114 1204126 . ? . description=dust chr4 ensembl protein_coding_gene 1198993 1200594 . - . ID=Thaps13254;biotype=protein_coding;description=RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BZG6];external_name=Thaps13254;logic_name=jgi_thaps3 chr4 ensembl transcript 1198993 1200594 . - . ID=Thaps13254;Parent=Thaps13254;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1198993 1199646 . - 0 ID=Thaps13254;Parent=Thaps13254;rank=3 chr4 . exon 1198993 1199646 . - . ID=Thaps13254.3;Parent=Thaps13254;constitutive=1;rank=3 chr4 . CDS 1199782 1200177 . - 0 ID=Thaps13254;Parent=Thaps13254;rank=2 chr4 . exon 1199782 1200177 . - . ID=Thaps13254.2;Parent=Thaps13254;constitutive=1;rank=2 chr4 . CDS 1200247 1200594 . - 0 ID=Thaps13254;Parent=Thaps13254;rank=1 chr4 . exon 1200247 1200594 . - . ID=Thaps13254.1;Parent=Thaps13254;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1206099 1208159 . + . ID=Thaps22288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZH0];external_name=Thaps22288;logic_name=jgi_thaps3 chr4 ensembl transcript 1206099 1208159 . + . ID=Thaps22288;Parent=Thaps22288;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1206099 1208159 . + 0 ID=Thaps22288;Parent=Thaps22288;rank=1 chr4 . exon 1206099 1208159 . + . ID=Thaps22288.1;Parent=Thaps22288;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1203318 1203533 . - . ID=Thaps33780;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZG8];external_name=Thaps33780;logic_name=jgi_thaps3 chr4 ensembl transcript 1203318 1203533 . - . ID=Thaps33780;Parent=Thaps33780;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1203318 1203533 . - 0 ID=Thaps33780;Parent=Thaps33780;rank=1 chr4 . exon 1203318 1203533 . - . ID=Thaps33780.1;Parent=Thaps33780;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1201809 1202360 . - . ID=Thaps40329;biotype=protein_coding;description=RL18a%2C ribosomal protein 18a 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BZG7];external_name=RL18A;logic_name=jgi_thaps3 chr4 ensembl transcript 1201809 1202360 . - . ID=Thaps40329;Parent=Thaps40329;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1201809 1202360 . - 0 ID=Thaps40329;Parent=Thaps40329;rank=1 chr4 . exon 1201809 1202360 . - . ID=Thaps40329.1;Parent=Thaps40329;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1196348 1197563 . - . ID=Thaps4503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZG5];external_name=Thaps4503;logic_name=jgi_thaps3 chr4 ensembl transcript 1196348 1197563 . - . ID=Thaps4503;Parent=Thaps4503;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1196348 1196526 . - 0 ID=Thaps4503;Parent=Thaps4503;rank=3 chr4 . exon 1196348 1196526 . - . ID=Thaps4503.3;Parent=Thaps4503;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1196608 1197225 . - 0 ID=Thaps4503;Parent=Thaps4503;rank=2 chr4 . exon 1196608 1197225 . - . ID=Thaps4503.2;Parent=Thaps4503;constitutive=1;rank=2 chr4 . CDS 1197308 1197563 . - 0 ID=Thaps4503;Parent=Thaps4503;rank=1 chr4 . exon 1197308 1197563 . - . ID=Thaps4503.1;Parent=Thaps4503;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1204368 1205753 . - . ID=Thaps4507;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZG9];external_name=Thaps4507;logic_name=jgi_thaps3 chr4 ensembl transcript 1204368 1205753 . - . ID=Thaps4507;Parent=Thaps4507;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1204368 1204387 . - 0 ID=Thaps4507;Parent=Thaps4507;rank=4 chr4 . exon 1204368 1204387 . - . ID=Thaps4507.4;Parent=Thaps4507;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1204452 1204614 . - 0 ID=Thaps4507;Parent=Thaps4507;rank=3 chr4 . exon 1204452 1204614 . - . ID=Thaps4507.3;Parent=Thaps4507;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1204705 1205460 . - 0 ID=Thaps4507;Parent=Thaps4507;rank=2 chr4 . exon 1204705 1205460 . - . ID=Thaps4507.2;Parent=Thaps4507;constitutive=1;rank=2 chr4 . CDS 1205574 1205753 . - 0 ID=Thaps4507;Parent=Thaps4507;rank=1 chr4 . exon 1205574 1205753 . - . ID=Thaps4507.1;Parent=Thaps4507;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1208522 1210327 . - . ID=Thaps33476;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZH1];external_name=Thaps33476;logic_name=jgi_thaps3 chr4 ensembl transcript 1208522 1210327 . - . ID=Thaps33476;Parent=Thaps33476;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1208522 1208627 . - 0 ID=Thaps33476;Parent=Thaps33476;rank=6 chr4 . exon 1208522 1208627 . - . ID=Thaps33476.6;Parent=Thaps33476;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 1208679 1208974 . - 0 ID=Thaps33476;Parent=Thaps33476;rank=5 chr4 . exon 1208679 1208974 . - . ID=Thaps33476.5;Parent=Thaps33476;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1209128 1209354 . - 0 ID=Thaps33476;Parent=Thaps33476;rank=4 chr4 . exon 1209128 1209354 . - . ID=Thaps33476.4;Parent=Thaps33476;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1209424 1209554 . - 0 ID=Thaps33476;Parent=Thaps33476;rank=3 chr4 . exon 1209424 1209554 . - . ID=Thaps33476.3;Parent=Thaps33476;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1209669 1209917 . - 0 ID=Thaps33476;Parent=Thaps33476;rank=2 chr4 . exon 1209669 1209917 . - . ID=Thaps33476.2;Parent=Thaps33476;constitutive=1;rank=2 chr4 . CDS 1210011 1210327 . - 0 ID=Thaps33476;Parent=Thaps33476;rank=1 chr4 . exon 1210011 1210327 . - . ID=Thaps33476.1;Parent=Thaps33476;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1214094 1216418 . + . ID=Thaps40335;biotype=protein_coding;description=Topoisomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BZH3];external_name=Thaps40335;logic_name=jgi_thaps3 chr4 ensembl transcript 1214094 1216418 . + . ID=Thaps40335;Parent=Thaps40335;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1214094 1214687 . + 0 ID=Thaps40335;Parent=Thaps40335;rank=1 chr4 . exon 1214094 1214687 . + . ID=Thaps40335.1;Parent=Thaps40335;constitutive=1;rank=1 chr4 . CDS 1214872 1215453 . + 0 ID=Thaps40335;Parent=Thaps40335;rank=2 chr4 . exon 1214872 1215453 . + . ID=Thaps40335.2;Parent=Thaps40335;constitutive=1;rank=2 chr4 . CDS 1215555 1216068 . + 0 ID=Thaps40335;Parent=Thaps40335;rank=3 chr4 . exon 1215555 1216068 . + . ID=Thaps40335.3;Parent=Thaps40335;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1216156 1216418 . + 0 ID=Thaps40335;Parent=Thaps40335;rank=4 chr4 . exon 1216156 1216418 . + . ID=Thaps40335.4;Parent=Thaps40335;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 1210932 1213149 . + . ID=Thaps4510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZH2];external_name=Thaps4510;logic_name=jgi_thaps3 chr4 ensembl transcript 1210932 1213149 . + . ID=Thaps4510;Parent=Thaps4510;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1210932 1211046 . + 0 ID=Thaps4510;Parent=Thaps4510;rank=1 chr4 . exon 1210932 1211046 . + . ID=Thaps4510.1;Parent=Thaps4510;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1211264 1211817 . + 0 ID=Thaps4510;Parent=Thaps4510;rank=2 chr4 . exon 1211264 1211817 . + . ID=Thaps4510.2;Parent=Thaps4510;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1211897 1212384 . + 0 ID=Thaps4510;Parent=Thaps4510;rank=3 chr4 . exon 1211897 1212384 . + . ID=Thaps4510.3;Parent=Thaps4510;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1212456 1213149 . + 0 ID=Thaps4510;Parent=Thaps4510;rank=4 chr4 . exon 1212456 1213149 . + . ID=Thaps4510.4;Parent=Thaps4510;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . repeat_region 1221895 1221904 . ? . description=dust chr4 . repeat_region 1224424 1224463 . ? . description=trf chr4 ensembl protein_coding_gene 1220021 1221638 . - . ID=Thaps22291;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZH5];external_name=Thaps22291;logic_name=jgi_thaps3 chr4 ensembl transcript 1220021 1221638 . - . ID=Thaps22291;Parent=Thaps22291;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1220021 1221494 . - 0 ID=Thaps22291;Parent=Thaps22291;rank=2 chr4 . exon 1220021 1221494 . - . ID=Thaps22291.2;Parent=Thaps22291;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1221604 1221638 . - 0 ID=Thaps22291;Parent=Thaps22291;rank=1 chr4 . exon 1221604 1221638 . - . ID=Thaps22291.1;Parent=Thaps22291;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1222361 1223833 . - . ID=Thaps33343;biotype=protein_coding;description=6-phosphogluconate dehydrogenase%2C decarboxylating [Source:UniProtKB/TrEMBL%3BAcc:B8BZH6];external_name=PGD1;logic_name=jgi_thaps3 chr4 ensembl transcript 1222361 1223833 . - . ID=Thaps33343;Parent=Thaps33343;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1222361 1223833 . - 0 ID=Thaps33343;Parent=Thaps33343;rank=1 chr4 . exon 1222361 1223833 . - . ID=Thaps33343.1;Parent=Thaps33343;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1216512 1218313 . - . ID=Thaps4512;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZH4];external_name=Thaps4512;logic_name=jgi_thaps3 chr4 ensembl transcript 1216512 1218313 . - . ID=Thaps4512;Parent=Thaps4512;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1216512 1217152 . - 0 ID=Thaps4512;Parent=Thaps4512;rank=4 chr4 . exon 1216512 1217152 . - . ID=Thaps4512.4;Parent=Thaps4512;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1217242 1217496 . - 0 ID=Thaps4512;Parent=Thaps4512;rank=3 chr4 . exon 1217242 1217496 . - . ID=Thaps4512.3;Parent=Thaps4512;constitutive=1;rank=3 chr4 . CDS 1217579 1217666 . - 0 ID=Thaps4512;Parent=Thaps4512;rank=2 chr4 . exon 1217579 1217666 . - . ID=Thaps4512.2;Parent=Thaps4512;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1217780 1218313 . - 0 ID=Thaps4512;Parent=Thaps4512;rank=1 chr4 . exon 1217780 1218313 . - . ID=Thaps4512.1;Parent=Thaps4512;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1232504 1233914 . + . ID=Thaps262186;biotype=protein_coding;description=Kinesin motor protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZH7];external_name=Thaps262186;logic_name=jgi_thaps3 chr4 ensembl transcript 1232504 1233914 . + . ID=Thaps262186;Parent=Thaps262186;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1232504 1233132 . + 0 ID=Thaps262186;Parent=Thaps262186;rank=1 chr4 . exon 1232504 1233132 . + . ID=Thaps262186.1;Parent=Thaps262186;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1233211 1233914 . + 0 ID=Thaps262186;Parent=Thaps262186;rank=2 chr4 . exon 1233211 1233914 . + . ID=Thaps262186.2;Parent=Thaps262186;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1235251 1236396 . - . ID=Thaps4516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZH8];external_name=Thaps4516;logic_name=jgi_thaps3 chr4 ensembl transcript 1235251 1236396 . - . ID=Thaps4516;Parent=Thaps4516;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1235251 1235995 . - 0 ID=Thaps4516;Parent=Thaps4516;rank=3 chr4 . exon 1235251 1235995 . - . ID=Thaps4516.3;Parent=Thaps4516;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1236055 1236176 . - 0 ID=Thaps4516;Parent=Thaps4516;rank=2 chr4 . exon 1236055 1236176 . - . ID=Thaps4516.2;Parent=Thaps4516;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1236298 1236396 . - 0 ID=Thaps4516;Parent=Thaps4516;rank=1 chr4 . repeat_region 1236916 1236966 . ? . description=dust chr4 . repeat_region 1239585 1239604 . ? . description=dust chr4 ensembl protein_coding_gene 1242759 1246679 . + . ID=Thaps22292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZI2];external_name=Thaps22292;logic_name=jgi_thaps3 chr4 ensembl transcript 1242759 1246679 . + . ID=Thaps22292;Parent=Thaps22292;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1242759 1244891 . + 0 ID=Thaps22292;Parent=Thaps22292;rank=1 chr4 . exon 1242759 1244891 . + . ID=Thaps22292.1;Parent=Thaps22292;constitutive=1;rank=1 chr4 . CDS 1244973 1245148 . + 0 ID=Thaps22292;Parent=Thaps22292;rank=2 chr4 . exon 1244973 1245148 . + . ID=Thaps22292.2;Parent=Thaps22292;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1245230 1246679 . + 0 ID=Thaps22292;Parent=Thaps22292;rank=3 chr4 . exon 1245230 1246679 . + . ID=Thaps22292.3;Parent=Thaps22292;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 1240706 1242204 . - . ID=Thaps33926;biotype=protein_coding;description=Obtusifoliol 14-alpha demethylase [Source:UniProtKB/TrEMBL%3BAcc:B8BZI1];external_name=Thaps33926;logic_name=jgi_thaps3 chr4 ensembl transcript 1240706 1242204 . - . ID=Thaps33926;Parent=Thaps33926;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1240706 1241947 . - 0 ID=Thaps33926;Parent=Thaps33926;rank=2 chr4 . exon 1240706 1241947 . - . ID=Thaps33926.2;Parent=Thaps33926;constitutive=1;rank=2 chr4 . CDS 1242109 1242204 . - 0 ID=Thaps33926;Parent=Thaps33926;rank=1 chr4 . exon 1242109 1242204 . - . ID=Thaps33926.1;Parent=Thaps33926;constitutive=1;rank=1 chr4 . exon 1236298 1236396 . - . ID=Thaps4516.1;Parent=Thaps4516;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1237352 1238083 . + . ID=Thaps4517;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZH9];external_name=Thaps4517;logic_name=jgi_thaps3 chr4 ensembl transcript 1237352 1238083 . + . ID=Thaps4517;Parent=Thaps4517;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1237352 1238083 . + 0 ID=Thaps4517;Parent=Thaps4517;rank=1 chr4 . exon 1237352 1238083 . + . ID=Thaps4517.1;Parent=Thaps4517;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1238219 1239361 . - . ID=Thaps4518;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZI0];external_name=Thaps4518;logic_name=jgi_thaps3 chr4 ensembl transcript 1238219 1239361 . - . ID=Thaps4518;Parent=Thaps4518;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1238219 1239361 . - 0 ID=Thaps4518;Parent=Thaps4518;rank=1 chr4 . exon 1238219 1239361 . - . ID=Thaps4518.1;Parent=Thaps4518;constitutive=1;rank=1 chr4 . repeat_region 1248398 1248681 . + . description=Harbinger3_TP chr4 . repeat_region 1248404 1248450 . ? . description=trf chr4 . repeat_region 1248443 1248570 . ? . description=trf chr4 . repeat_region 1248696 1248779 . - . description=Harbinger3_TP chr4 . repeat_region 1248888 1248976 . ? . description=trf chr4 . repeat_region 1248911 1249633 . - . description=Harbinger3_TP chr4 . repeat_region 1249636 1249754 . - . description=Harbinger3_TP chr4 . repeat_region 1249729 1249782 . ? . description=trf chr4 . repeat_region 1250089 1250137 . ? . description=trf chr4 . repeat_region 1250163 1251226 . - . description=Harbinger4_TP chr4 . repeat_region 1251221 1251959 . - . description=Harbinger4_TP chr4 . repeat_region 1251962 1252095 . - . description=Harbinger3_TP chr4 ensembl protein_coding_gene 1246725 1247945 . - . ID=Thaps33774;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZI3];external_name=Thaps33774;logic_name=jgi_thaps3 chr4 ensembl transcript 1246725 1247945 . - . ID=Thaps33774;Parent=Thaps33774;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1246725 1246854 . - 0 ID=Thaps33774;Parent=Thaps33774;rank=3 chr4 . exon 1246725 1246854 . - . ID=Thaps33774.3;Parent=Thaps33774;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1246957 1247410 . - 0 ID=Thaps33774;Parent=Thaps33774;rank=2 chr4 . exon 1246957 1247410 . - . ID=Thaps33774.2;Parent=Thaps33774;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1247471 1247945 . - 0 ID=Thaps33774;Parent=Thaps33774;rank=1 chr4 . exon 1247471 1247945 . - . ID=Thaps33774.1;Parent=Thaps33774;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1253111 1253491 . - . ID=Thaps33950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZI4];external_name=Thaps33950;logic_name=jgi_thaps3 chr4 ensembl transcript 1253111 1253491 . - . ID=Thaps33950;Parent=Thaps33950;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1253111 1253491 . - 0 ID=Thaps33950;Parent=Thaps33950;rank=1 chr4 . exon 1253111 1253491 . - . ID=Thaps33950.1;Parent=Thaps33950;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1254221 1256932 . + . ID=Thaps4523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZI5];external_name=Thaps4523;logic_name=jgi_thaps3 chr4 ensembl transcript 1254221 1256932 . + . ID=Thaps4523;Parent=Thaps4523;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1254221 1254700 . + 0 ID=Thaps4523;Parent=Thaps4523;rank=1 chr4 . exon 1254221 1254700 . + . ID=Thaps4523.1;Parent=Thaps4523;constitutive=1;rank=1 chr4 . CDS 1254781 1254900 . + 0 ID=Thaps4523;Parent=Thaps4523;rank=2 chr4 . exon 1254781 1254900 . + . ID=Thaps4523.2;Parent=Thaps4523;constitutive=1;rank=2 chr4 . CDS 1254949 1256523 . + 0 ID=Thaps4523;Parent=Thaps4523;rank=3 chr4 . exon 1254949 1256523 . + . ID=Thaps4523.3;Parent=Thaps4523;constitutive=1;rank=3 chr4 . CDS 1256615 1256932 . + 0 ID=Thaps4523;Parent=Thaps4523;rank=4 chr4 . repeat_region 1257046 1257054 . ? . description=dust chr4 ensembl protein_coding_gene 1260633 1262537 . - . ID=Thaps22293;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZI8];external_name=Thaps22293;logic_name=jgi_thaps3 chr4 ensembl transcript 1260633 1262537 . - . ID=Thaps22293;Parent=Thaps22293;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1260633 1262537 . - 0 ID=Thaps22293;Parent=Thaps22293;rank=1 chr4 . exon 1260633 1262537 . - . ID=Thaps22293.1;Parent=Thaps22293;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1263117 1264592 . + . ID=Thaps40341;biotype=protein_coding;description=U3 snornp-associated 55-kDa protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZI9];external_name=Thaps40341;logic_name=jgi_thaps3 chr4 ensembl transcript 1263117 1264592 . + . ID=Thaps40341;Parent=Thaps40341;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1263117 1263171 . + 0 ID=Thaps40341;Parent=Thaps40341;rank=1 chr4 . exon 1263117 1263171 . + . ID=Thaps40341.1;Parent=Thaps40341;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1263394 1264295 . + 0 ID=Thaps40341;Parent=Thaps40341;rank=2 chr4 . exon 1263394 1264295 . + . ID=Thaps40341.2;Parent=Thaps40341;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1264380 1264592 . + 0 ID=Thaps40341;Parent=Thaps40341;rank=3 chr4 . exon 1264380 1264592 . + . ID=Thaps40341.3;Parent=Thaps40341;constitutive=1;rank=3 chr4 . exon 1256615 1256932 . + . ID=Thaps4523.4;Parent=Thaps4523;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 1257255 1258621 . - . ID=Thaps4524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZI6];external_name=Thaps4524;logic_name=jgi_thaps3 chr4 ensembl transcript 1257255 1258621 . - . ID=Thaps4524;Parent=Thaps4524;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1257255 1257983 . - 0 ID=Thaps4524;Parent=Thaps4524;rank=2 chr4 . exon 1257255 1257983 . - . ID=Thaps4524.2;Parent=Thaps4524;constitutive=1;rank=2 chr4 . CDS 1258142 1258621 . - 0 ID=Thaps4524;Parent=Thaps4524;rank=1 chr4 . exon 1258142 1258621 . - . ID=Thaps4524.1;Parent=Thaps4524;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1259040 1260530 . + . ID=Thaps4525;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZI7];external_name=Thaps4525;logic_name=jgi_thaps3 chr4 ensembl transcript 1259040 1260530 . + . ID=Thaps4525;Parent=Thaps4525;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1259040 1259650 . + 0 ID=Thaps4525;Parent=Thaps4525;rank=1 chr4 . exon 1259040 1259650 . + . ID=Thaps4525.1;Parent=Thaps4525;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1259703 1260078 . + 0 ID=Thaps4525;Parent=Thaps4525;rank=2 chr4 . exon 1259703 1260078 . + . ID=Thaps4525.2;Parent=Thaps4525;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1260156 1260269 . + 0 ID=Thaps4525;Parent=Thaps4525;rank=3 chr4 . exon 1260156 1260269 . + . ID=Thaps4525.3;Parent=Thaps4525;constitutive=1;rank=3 chr4 . CDS 1260384 1260530 . + 0 ID=Thaps4525;Parent=Thaps4525;rank=4 chr4 . exon 1260384 1260530 . + . ID=Thaps4525.4;Parent=Thaps4525;constitutive=1;rank=4 chr4 . repeat_region 1266556 1266682 . - . description=PtCopiaLikeTe2 chr4 . repeat_region 1266822 1267026 . - . description=Copia6I_TP chr4 . repeat_region 1267253 1268746 . + . description=Harbinger4_TP chr4 . repeat_region 1267263 1267305 . ? . description=trf chr4 ensembl protein_coding_gene 1275278 1280796 . + . ID=Thaps22296;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ4];external_name=Thaps22296;logic_name=jgi_thaps3 chr4 ensembl transcript 1275278 1280796 . + . ID=Thaps22296;Parent=Thaps22296;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1275278 1275470 . + 0 ID=Thaps22296;Parent=Thaps22296;rank=1 chr4 . exon 1275278 1275470 . + . ID=Thaps22296.1;Parent=Thaps22296;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1275587 1276877 . + 0 ID=Thaps22296;Parent=Thaps22296;rank=2 chr4 . exon 1275587 1276877 . + . ID=Thaps22296.2;Parent=Thaps22296;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1277040 1278435 . + 0 ID=Thaps22296;Parent=Thaps22296;rank=3 chr4 . CDS 1278526 1280796 . + 0 ID=Thaps22296;Parent=Thaps22296;rank=4 chr4 ensembl gene 1266456 1266977 . - . ID=Thaps262191;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr4 ensembl transcript 1266456 1266977 . - . ID=Thaps262191;Parent=Thaps262191;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr4 . exon 1266456 1266977 . - . ID=Thaps262191.1;Parent=Thaps262191;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1271116 1271811 . + . ID=Thaps262193;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ1];external_name=Thaps262193;logic_name=jgi_thaps3 chr4 ensembl transcript 1271116 1271811 . + . ID=Thaps262193;Parent=Thaps262193;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1271116 1271185 . + 0 ID=Thaps262193;Parent=Thaps262193;rank=1 chr4 . exon 1271116 1271185 . + . ID=Thaps262193.1;Parent=Thaps262193;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1271267 1271434 . + 0 ID=Thaps262193;Parent=Thaps262193;rank=2 chr4 . exon 1271267 1271434 . + . ID=Thaps262193.2;Parent=Thaps262193;constitutive=1;rank=2 chr4 . CDS 1271477 1271811 . + 0 ID=Thaps262193;Parent=Thaps262193;rank=3 chr4 . exon 1271477 1271811 . + . ID=Thaps262193.3;Parent=Thaps262193;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1269946 1270500 . + . ID=Thaps33566;biotype=protein_coding;description=Thylakoidal processing peptidase [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ0];external_name=TPP1;logic_name=jgi_thaps3 chr4 ensembl transcript 1269946 1270500 . + . ID=Thaps33566;Parent=Thaps33566;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1269946 1270500 . + 0 ID=Thaps33566;Parent=Thaps33566;rank=1 chr4 . exon 1269946 1270500 . + . ID=Thaps33566.1;Parent=Thaps33566;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1272063 1272728 . - . ID=Thaps33911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ2];external_name=Thaps33911;logic_name=jgi_thaps3 chr4 ensembl transcript 1272063 1272728 . - . ID=Thaps33911;Parent=Thaps33911;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1272063 1272728 . - 0 ID=Thaps33911;Parent=Thaps33911;rank=1 chr4 . exon 1272063 1272728 . - . ID=Thaps33911.1;Parent=Thaps33911;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1273290 1274822 . + . ID=Thaps4531;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ3];external_name=Thaps4531;logic_name=jgi_thaps3 chr4 ensembl transcript 1273290 1274822 . + . ID=Thaps4531;Parent=Thaps4531;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1273290 1274822 . + 0 ID=Thaps4531;Parent=Thaps4531;rank=1 chr4 . exon 1273290 1274822 . + . ID=Thaps4531.1;Parent=Thaps4531;constitutive=1;rank=1 chr4 . repeat_region 1276827 1276857 . ? . description=dust chr4 . repeat_region 1277355 1277405 . ? . description=dust chr4 . exon 1277040 1278435 . + . ID=Thaps22296.3;Parent=Thaps22296;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . exon 1278526 1280796 . + . ID=Thaps22296.4;Parent=Thaps22296;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 1280871 1283225 . - . ID=Thaps22297;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ5];external_name=Thaps22297;logic_name=jgi_thaps3 chr4 ensembl transcript 1280871 1283225 . - . ID=Thaps22297;Parent=Thaps22297;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1280871 1283225 . - 0 ID=Thaps22297;Parent=Thaps22297;rank=1 chr4 . exon 1280871 1283225 . - . ID=Thaps22297.1;Parent=Thaps22297;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1284507 1286718 . + . ID=Thaps40348;biotype=protein_coding;description=Cell division cycle protein 48 [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ6];external_name=CDC48;logic_name=jgi_thaps3 chr4 ensembl transcript 1284507 1286718 . + . ID=Thaps40348;Parent=Thaps40348;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1284507 1284675 . + 0 ID=Thaps40348;Parent=Thaps40348;rank=1 chr4 . exon 1284507 1284675 . + . ID=Thaps40348.1;Parent=Thaps40348;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1284759 1285805 . + 0 ID=Thaps40348;Parent=Thaps40348;rank=2 chr4 . exon 1284759 1285805 . + . ID=Thaps40348.2;Parent=Thaps40348;constitutive=1;rank=2 chr4 . CDS 1285898 1286718 . + 0 ID=Thaps40348;Parent=Thaps40348;rank=3 chr4 . exon 1285898 1286718 . + . ID=Thaps40348.3;Parent=Thaps40348;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . repeat_region 1289312 1289337 . ? . description=trf chr4 ensembl protein_coding_gene 1290966 1291961 . + . ID=Thaps27922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ9];external_name=Thaps27922;logic_name=jgi_thaps3 chr4 ensembl transcript 1290966 1291961 . + . ID=Thaps27922;Parent=Thaps27922;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1290966 1291453 . + 0 ID=Thaps27922;Parent=Thaps27922;rank=1 chr4 . exon 1290966 1291453 . + . ID=Thaps27922.1;Parent=Thaps27922;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1291631 1291961 . + 0 ID=Thaps27922;Parent=Thaps27922;rank=2 chr4 . exon 1291631 1291961 . + . ID=Thaps27922.2;Parent=Thaps27922;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1294458 1295426 . - . ID=Thaps33985;biotype=protein_coding;description=Pseudouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BZK0];external_name=Thaps33985;logic_name=jgi_thaps3 chr4 ensembl transcript 1294458 1295426 . - . ID=Thaps33985;Parent=Thaps33985;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1294458 1295426 . - 0 ID=Thaps33985;Parent=Thaps33985;rank=1 chr4 . exon 1294458 1295426 . - . ID=Thaps33985.1;Parent=Thaps33985;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1288041 1288733 . + . ID=Thaps4535;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ7];external_name=Thaps4535;logic_name=jgi_thaps3 chr4 ensembl transcript 1288041 1288733 . + . ID=Thaps4535;Parent=Thaps4535;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1288041 1288733 . + 0 ID=Thaps4535;Parent=Thaps4535;rank=1 chr4 . exon 1288041 1288733 . + . ID=Thaps4535.1;Parent=Thaps4535;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1289066 1290413 . + . ID=Thaps4536;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZJ8];external_name=Thaps4536;logic_name=jgi_thaps3 chr4 ensembl transcript 1289066 1290413 . + . ID=Thaps4536;Parent=Thaps4536;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1289066 1289699 . + 0 ID=Thaps4536;Parent=Thaps4536;rank=1 chr4 . exon 1289066 1289699 . + . ID=Thaps4536.1;Parent=Thaps4536;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1289797 1290413 . + 0 ID=Thaps4536;Parent=Thaps4536;rank=2 chr4 . exon 1289797 1290413 . + . ID=Thaps4536.2;Parent=Thaps4536;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . repeat_region 1300714 1300722 . ? . description=dust chr4 ensembl protein_coding_gene 1296554 1297458 . + . ID=Thaps22301;biotype=protein_coding;description=Phosphomannomutase [Source:UniProtKB/TrEMBL%3BAcc:B8BZK1];external_name=PMM1;logic_name=jgi_thaps3 chr4 ensembl transcript 1296554 1297458 . + . ID=Thaps22301;Parent=Thaps22301;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1296554 1296904 . + 0 ID=Thaps22301;Parent=Thaps22301;rank=1 chr4 . exon 1296554 1296904 . + . ID=Thaps22301.1;Parent=Thaps22301;constitutive=1;rank=1 chr4 . CDS 1297060 1297458 . + 0 ID=Thaps22301;Parent=Thaps22301;rank=2 chr4 . exon 1297060 1297458 . + . ID=Thaps22301.2;Parent=Thaps22301;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1305141 1307784 . - . ID=Thaps22302;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZK4];external_name=Thaps22302;logic_name=jgi_thaps3 chr4 ensembl transcript 1305141 1307784 . - . ID=Thaps22302;Parent=Thaps22302;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1305141 1306816 . - 0 ID=Thaps22302;Parent=Thaps22302;rank=2 chr4 . exon 1305141 1306816 . - . ID=Thaps22302.2;Parent=Thaps22302;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1306842 1307784 . - 0 ID=Thaps22302;Parent=Thaps22302;rank=1 chr4 ensembl protein_coding_gene 1301138 1304428 . + . ID=Thaps33287;biotype=protein_coding;description=Ubiquitin activating enzyme 2 [Source:UniProtKB/TrEMBL%3BAcc:B8BZK3];external_name=UBA2;logic_name=jgi_thaps3 chr4 ensembl transcript 1301138 1304428 . + . ID=Thaps33287;Parent=Thaps33287;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1301138 1301683 . + 0 ID=Thaps33287;Parent=Thaps33287;rank=1 chr4 . exon 1301138 1301683 . + . ID=Thaps33287.1;Parent=Thaps33287;constitutive=1;rank=1 chr4 . CDS 1301729 1301860 . + 0 ID=Thaps33287;Parent=Thaps33287;rank=2 chr4 . exon 1301729 1301860 . + . ID=Thaps33287.2;Parent=Thaps33287;constitutive=1;rank=2 chr4 . CDS 1302101 1303296 . + 0 ID=Thaps33287;Parent=Thaps33287;rank=3 chr4 . exon 1302101 1303296 . + . ID=Thaps33287.3;Parent=Thaps33287;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1303381 1303988 . + 0 ID=Thaps33287;Parent=Thaps33287;rank=4 chr4 . exon 1303381 1303988 . + . ID=Thaps33287.4;Parent=Thaps33287;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1304070 1304428 . + 0 ID=Thaps33287;Parent=Thaps33287;rank=5 chr4 . exon 1304070 1304428 . + . ID=Thaps33287.5;Parent=Thaps33287;constitutive=1;ensembl_end_phase=2;rank=5 chr4 ensembl protein_coding_gene 1298545 1300181 . + . ID=Thaps4540;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZK2];external_name=Thaps4540;logic_name=jgi_thaps3 chr4 ensembl transcript 1298545 1300181 . + . ID=Thaps4540;Parent=Thaps4540;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1298545 1299077 . + 0 ID=Thaps4540;Parent=Thaps4540;rank=1 chr4 . exon 1298545 1299077 . + . ID=Thaps4540.1;Parent=Thaps4540;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1299245 1300181 . + 0 ID=Thaps4540;Parent=Thaps4540;rank=2 chr4 . exon 1299245 1300181 . + . ID=Thaps4540.2;Parent=Thaps4540;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . repeat_region 1309632 1309658 . ? . description=trf chr4 . exon 1306842 1307784 . - . ID=Thaps22302.1;Parent=Thaps22302;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1310612 1312710 . + . ID=Thaps22303;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZK6];external_name=Thaps22303;logic_name=jgi_thaps3 chr4 ensembl transcript 1310612 1312710 . + . ID=Thaps22303;Parent=Thaps22303;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1310612 1310634 . + 0 ID=Thaps22303;Parent=Thaps22303;rank=1 chr4 . exon 1310612 1310634 . + . ID=Thaps22303.1;Parent=Thaps22303;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1310712 1310731 . + 0 ID=Thaps22303;Parent=Thaps22303;rank=2 chr4 . exon 1310712 1310731 . + . ID=Thaps22303.2;Parent=Thaps22303;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1310771 1312710 . + 0 ID=Thaps22303;Parent=Thaps22303;rank=3 chr4 . exon 1310771 1312710 . + . ID=Thaps22303.3;Parent=Thaps22303;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1313131 1315090 . - . ID=Thaps22304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZK7];external_name=Thaps22304;logic_name=jgi_thaps3 chr4 ensembl transcript 1313131 1315090 . - . ID=Thaps22304;Parent=Thaps22304;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1313131 1314017 . - 0 ID=Thaps22304;Parent=Thaps22304;rank=2 chr4 . exon 1313131 1314017 . - . ID=Thaps22304.2;Parent=Thaps22304;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1314043 1315090 . - 0 ID=Thaps22304;Parent=Thaps22304;rank=1 chr4 . exon 1314043 1315090 . - . ID=Thaps22304.1;Parent=Thaps22304;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1315325 1318219 . + . ID=Thaps22305;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZK8];external_name=Thaps22305;logic_name=jgi_thaps3 chr4 ensembl transcript 1315325 1318219 . + . ID=Thaps22305;Parent=Thaps22305;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1315325 1315388 . + 0 ID=Thaps22305;Parent=Thaps22305;rank=1 chr4 . exon 1315325 1315388 . + . ID=Thaps22305.1;Parent=Thaps22305;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1315409 1317727 . + 0 ID=Thaps22305;Parent=Thaps22305;rank=2 chr4 . exon 1315409 1317727 . + . ID=Thaps22305.2;Parent=Thaps22305;constitutive=1;rank=2 chr4 . CDS 1317867 1318219 . + 0 ID=Thaps22305;Parent=Thaps22305;rank=3 chr4 ensembl protein_coding_gene 1309251 1310192 . - . ID=Thaps4543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZK5];external_name=Thaps4543;logic_name=jgi_thaps3 chr4 ensembl transcript 1309251 1310192 . - . ID=Thaps4543;Parent=Thaps4543;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1309251 1309619 . - 0 ID=Thaps4543;Parent=Thaps4543;rank=2 chr4 . exon 1309251 1309619 . - . ID=Thaps4543.2;Parent=Thaps4543;constitutive=1;rank=2 chr4 . CDS 1309746 1310192 . - 0 ID=Thaps4543;Parent=Thaps4543;rank=1 chr4 . exon 1309746 1310192 . - . ID=Thaps4543.1;Parent=Thaps4543;constitutive=1;rank=1 chr4 . repeat_region 1321660 1321693 . ? . description=dust chr4 ensembl protein_coding_gene 1323724 1323984 . + . ID=Thaps19764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZL1];external_name=Thaps19764;logic_name=jgi_thaps3 chr4 ensembl transcript 1323724 1323984 . + . ID=Thaps19764;Parent=Thaps19764;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1323724 1323984 . + 0 ID=Thaps19764;Parent=Thaps19764;rank=1 chr4 . exon 1323724 1323984 . + . ID=Thaps19764.1;Parent=Thaps19764;constitutive=1;rank=1 chr4 . exon 1317867 1318219 . + . ID=Thaps22305.3;Parent=Thaps22305;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1324731 1325339 . + . ID=Thaps22307;biotype=protein_coding;description=Vesicle-transport protein Bet3 [Source:UniProtKB/TrEMBL%3BAcc:B8BZL3];external_name=Thaps22307;logic_name=jgi_thaps3 chr4 ensembl transcript 1324731 1325339 . + . ID=Thaps22307;Parent=Thaps22307;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1324731 1325339 . + 0 ID=Thaps22307;Parent=Thaps22307;rank=1 chr4 . exon 1324731 1325339 . + . ID=Thaps22307.1;Parent=Thaps22307;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1321188 1322348 . - . ID=Thaps262201;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZL0];external_name=Thaps262201;logic_name=jgi_thaps3 chr4 ensembl transcript 1321188 1322348 . - . ID=Thaps262201;Parent=Thaps262201;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1321188 1321271 . - 0 ID=Thaps262201;Parent=Thaps262201;rank=5 chr4 . exon 1321188 1321271 . - . ID=Thaps262201.5;Parent=Thaps262201;constitutive=1;rank=5 chr4 . CDS 1321314 1321418 . - 0 ID=Thaps262201;Parent=Thaps262201;rank=4 chr4 . exon 1321314 1321418 . - . ID=Thaps262201.4;Parent=Thaps262201;constitutive=1;rank=4 chr4 . CDS 1321473 1321695 . - 0 ID=Thaps262201;Parent=Thaps262201;rank=3 chr4 . exon 1321473 1321695 . - . ID=Thaps262201.3;Parent=Thaps262201;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1321768 1322007 . - 0 ID=Thaps262201;Parent=Thaps262201;rank=2 chr4 . exon 1321768 1322007 . - . ID=Thaps262201.2;Parent=Thaps262201;constitutive=1;rank=2 chr4 . CDS 1322140 1322348 . - 0 ID=Thaps262201;Parent=Thaps262201;rank=1 chr4 . exon 1322140 1322348 . - . ID=Thaps262201.1;Parent=Thaps262201;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1324120 1324505 . + . ID=Thaps33919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZL2];external_name=Thaps33919;logic_name=jgi_thaps3 chr4 ensembl transcript 1324120 1324505 . + . ID=Thaps33919;Parent=Thaps33919;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1324120 1324304 . + 0 ID=Thaps33919;Parent=Thaps33919;rank=1 chr4 . exon 1324120 1324304 . + . ID=Thaps33919.1;Parent=Thaps33919;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1324418 1324505 . + 0 ID=Thaps33919;Parent=Thaps33919;rank=2 chr4 . exon 1324418 1324505 . + . ID=Thaps33919.2;Parent=Thaps33919;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1318338 1320668 . - . ID=Thaps4547;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZK9];external_name=Thaps4547;logic_name=jgi_thaps3 chr4 ensembl transcript 1318338 1320668 . - . ID=Thaps4547;Parent=Thaps4547;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1318338 1320668 . - 0 ID=Thaps4547;Parent=Thaps4547;rank=1 chr4 . exon 1318338 1320668 . - . ID=Thaps4547.1;Parent=Thaps4547;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1330875 1335530 . - . ID=Thaps22308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZL7];external_name=Thaps22308;logic_name=jgi_thaps3 chr4 ensembl transcript 1330875 1335530 . - . ID=Thaps22308;Parent=Thaps22308;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1330875 1335530 . - 0 ID=Thaps22308;Parent=Thaps22308;rank=1 chr4 . exon 1330875 1335530 . - . ID=Thaps22308.1;Parent=Thaps22308;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1328333 1328650 . + . ID=Thaps262203;biotype=protein_coding;description=Triacylglycerol lipase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZL5];external_name=TAL1_2;logic_name=jgi_thaps3 chr4 ensembl transcript 1328333 1328650 . + . ID=Thaps262203;Parent=Thaps262203;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1328333 1328650 . + 0 ID=Thaps262203;Parent=Thaps262203;rank=1 chr4 . exon 1328333 1328650 . + . ID=Thaps262203.1;Parent=Thaps262203;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1326263 1328303 . + . ID=Thaps4551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZL4];external_name=Thaps4551;logic_name=jgi_thaps3 chr4 ensembl transcript 1326263 1328303 . + . ID=Thaps4551;Parent=Thaps4551;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1326263 1327805 . + 0 ID=Thaps4551;Parent=Thaps4551;rank=1 chr4 . exon 1326263 1327805 . + . ID=Thaps4551.1;Parent=Thaps4551;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1327899 1328079 . + 0 ID=Thaps4551;Parent=Thaps4551;rank=2 chr4 . exon 1327899 1328079 . + . ID=Thaps4551.2;Parent=Thaps4551;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1328150 1328182 . + 0 ID=Thaps4551;Parent=Thaps4551;rank=3 chr4 . exon 1328150 1328182 . + . ID=Thaps4551.3;Parent=Thaps4551;constitutive=1;rank=3 chr4 . CDS 1328213 1328303 . + 0 ID=Thaps4551;Parent=Thaps4551;rank=4 chr4 . exon 1328213 1328303 . + . ID=Thaps4551.4;Parent=Thaps4551;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 1329243 1330451 . - . ID=Thaps4552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZL6];external_name=Thaps4552;logic_name=jgi_thaps3 chr4 ensembl transcript 1329243 1330451 . - . ID=Thaps4552;Parent=Thaps4552;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1329243 1330451 . - 0 ID=Thaps4552;Parent=Thaps4552;rank=1 chr4 . exon 1329243 1330451 . - . ID=Thaps4552.1;Parent=Thaps4552;constitutive=1;rank=1 chr4 . repeat_region 1338456 1338469 . ? . description=dust chr4 ensembl protein_coding_gene 1343081 1346396 . + . ID=Thaps22311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZM2];external_name=Thaps22311;logic_name=jgi_thaps3 chr4 ensembl transcript 1343081 1346396 . + . ID=Thaps22311;Parent=Thaps22311;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1343081 1344002 . + 0 ID=Thaps22311;Parent=Thaps22311;rank=1 chr4 . exon 1343081 1344002 . + . ID=Thaps22311.1;Parent=Thaps22311;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1344109 1346396 . + 0 ID=Thaps22311;Parent=Thaps22311;rank=2 chr4 . exon 1344109 1346396 . + . ID=Thaps22311.2;Parent=Thaps22311;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1336083 1336558 . + . ID=Thaps262204;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZL8];external_name=Thaps262204;logic_name=jgi_thaps3 chr4 ensembl transcript 1336083 1336558 . + . ID=Thaps262204;Parent=Thaps262204;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1336083 1336558 . + 0 ID=Thaps262204;Parent=Thaps262204;rank=1 chr4 . exon 1336083 1336558 . + . ID=Thaps262204.1;Parent=Thaps262204;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1342072 1342608 . - . ID=Thaps33653;biotype=protein_coding;description=GrpE protein homolog [Source:UniProtKB/TrEMBL%3BAcc:B8BZM1];external_name=Thaps33653;logic_name=jgi_thaps3 chr4 ensembl transcript 1342072 1342608 . - . ID=Thaps33653;Parent=Thaps33653;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1342072 1342608 . - 0 ID=Thaps33653;Parent=Thaps33653;rank=1 chr4 . exon 1342072 1342608 . - . ID=Thaps33653.1;Parent=Thaps33653;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1336712 1337846 . - . ID=Thaps4555;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZL9];external_name=Thaps4555;logic_name=jgi_thaps3 chr4 ensembl transcript 1336712 1337846 . - . ID=Thaps4555;Parent=Thaps4555;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1336712 1337239 . - 0 ID=Thaps4555;Parent=Thaps4555;rank=2 chr4 . exon 1336712 1337239 . - . ID=Thaps4555.2;Parent=Thaps4555;constitutive=1;rank=2 chr4 . CDS 1337364 1337846 . - 0 ID=Thaps4555;Parent=Thaps4555;rank=1 chr4 . exon 1337364 1337846 . - . ID=Thaps4555.1;Parent=Thaps4555;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1338219 1341834 . + . ID=Thaps4556;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZM0];external_name=Thaps4556;logic_name=jgi_thaps3 chr4 ensembl transcript 1338219 1341834 . + . ID=Thaps4556;Parent=Thaps4556;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1338219 1341272 . + 0 ID=Thaps4556;Parent=Thaps4556;rank=1 chr4 . exon 1338219 1341272 . + . ID=Thaps4556.1;Parent=Thaps4556;constitutive=1;rank=1 chr4 . CDS 1341352 1341834 . + 0 ID=Thaps4556;Parent=Thaps4556;rank=2 chr4 . exon 1341352 1341834 . + . ID=Thaps4556.2;Parent=Thaps4556;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1346557 1348422 . - . ID=Thaps22312;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZM3];external_name=Thaps22312;logic_name=jgi_thaps3 chr4 ensembl transcript 1346557 1348422 . - . ID=Thaps22312;Parent=Thaps22312;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1346557 1347094 . - 0 ID=Thaps22312;Parent=Thaps22312;rank=3 chr4 . exon 1346557 1347094 . - . ID=Thaps22312.3;Parent=Thaps22312;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1347184 1347906 . - 0 ID=Thaps22312;Parent=Thaps22312;rank=2 chr4 . exon 1347184 1347906 . - . ID=Thaps22312.2;Parent=Thaps22312;constitutive=1;rank=2 chr4 . CDS 1347992 1348422 . - 0 ID=Thaps22312;Parent=Thaps22312;rank=1 chr4 . exon 1347992 1348422 . - . ID=Thaps22312.1;Parent=Thaps22312;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1348636 1350537 . + . ID=Thaps22313;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZM4];external_name=Thaps22313;logic_name=jgi_thaps3 chr4 ensembl transcript 1348636 1350537 . + . ID=Thaps22313;Parent=Thaps22313;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1348636 1349150 . + 0 ID=Thaps22313;Parent=Thaps22313;rank=1 chr4 . exon 1348636 1349150 . + . ID=Thaps22313.1;Parent=Thaps22313;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1349262 1350537 . + 0 ID=Thaps22313;Parent=Thaps22313;rank=2 chr4 . exon 1349262 1350537 . + . ID=Thaps22313.2;Parent=Thaps22313;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1352234 1353088 . - . ID=Thaps22315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZM6];external_name=Thaps22315;logic_name=jgi_thaps3 chr4 ensembl transcript 1352234 1353088 . - . ID=Thaps22315;Parent=Thaps22315;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1352234 1353088 . - 0 ID=Thaps22315;Parent=Thaps22315;rank=1 chr4 . exon 1352234 1353088 . - . ID=Thaps22315.1;Parent=Thaps22315;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1351326 1351816 . - . ID=Thaps40;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZM5];external_name=Thaps40;logic_name=jgi_thaps3 chr4 ensembl transcript 1351326 1351816 . - . ID=Thaps40;Parent=Thaps40;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1351326 1351584 . - 0 ID=Thaps40;Parent=Thaps40;rank=2 chr4 . exon 1351326 1351584 . - . ID=Thaps40.2;Parent=Thaps40;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1351701 1351816 . - 0 ID=Thaps40;Parent=Thaps40;rank=1 chr4 . exon 1351701 1351816 . - . ID=Thaps40.1;Parent=Thaps40;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1353398 1355203 . + . ID=Thaps4563;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZM7];external_name=Thaps4563;logic_name=jgi_thaps3 chr4 ensembl transcript 1353398 1355203 . + . ID=Thaps4563;Parent=Thaps4563;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1353398 1354633 . + 0 ID=Thaps4563;Parent=Thaps4563;rank=1 chr4 . exon 1353398 1354633 . + . ID=Thaps4563.1;Parent=Thaps4563;constitutive=1;rank=1 chr4 . CDS 1354724 1354844 . + 0 ID=Thaps4563;Parent=Thaps4563;rank=2 chr4 . exon 1354724 1354844 . + . ID=Thaps4563.2;Parent=Thaps4563;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1354923 1355203 . + 0 ID=Thaps4563;Parent=Thaps4563;rank=3 chr4 . exon 1354923 1355203 . + . ID=Thaps4563.3;Parent=Thaps4563;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . repeat_region 1364079 1364122 . ? . description=trf chr4 ensembl protein_coding_gene 1356021 1357725 . + . ID=Thaps22316;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZM8];external_name=Thaps22316;logic_name=jgi_thaps3 chr4 ensembl transcript 1356021 1357725 . + . ID=Thaps22316;Parent=Thaps22316;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1356021 1356172 . + 0 ID=Thaps22316;Parent=Thaps22316;rank=1 chr4 . exon 1356021 1356172 . + . ID=Thaps22316.1;Parent=Thaps22316;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1356246 1357725 . + 0 ID=Thaps22316;Parent=Thaps22316;rank=2 chr4 . exon 1356246 1357725 . + . ID=Thaps22316.2;Parent=Thaps22316;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1362938 1363759 . - . ID=Thaps33337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZN1];external_name=Thaps33337;logic_name=jgi_thaps3 chr4 ensembl transcript 1362938 1363759 . - . ID=Thaps33337;Parent=Thaps33337;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1362938 1363759 . - 0 ID=Thaps33337;Parent=Thaps33337;rank=1 chr4 . exon 1362938 1363759 . - . ID=Thaps33337.1;Parent=Thaps33337;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1361337 1362472 . - . ID=Thaps33798;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZN0];external_name=Thaps33798;logic_name=jgi_thaps3 chr4 ensembl transcript 1361337 1362472 . - . ID=Thaps33798;Parent=Thaps33798;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1361337 1361603 . - 0 ID=Thaps33798;Parent=Thaps33798;rank=4 chr4 . exon 1361337 1361603 . - . ID=Thaps33798.4;Parent=Thaps33798;constitutive=1;rank=4 chr4 . CDS 1361685 1361832 . - 0 ID=Thaps33798;Parent=Thaps33798;rank=3 chr4 . exon 1361685 1361832 . - . ID=Thaps33798.3;Parent=Thaps33798;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1361902 1362203 . - 0 ID=Thaps33798;Parent=Thaps33798;rank=2 chr4 . exon 1361902 1362203 . - . ID=Thaps33798.2;Parent=Thaps33798;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1362290 1362472 . - 0 ID=Thaps33798;Parent=Thaps33798;rank=1 chr4 . exon 1362290 1362472 . - . ID=Thaps33798.1;Parent=Thaps33798;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1359051 1361023 . + . ID=Thaps4565;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZM9];external_name=Thaps4565;logic_name=jgi_thaps3 chr4 ensembl transcript 1359051 1361023 . + . ID=Thaps4565;Parent=Thaps4565;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1359051 1359114 . + 0 ID=Thaps4565;Parent=Thaps4565;rank=1 chr4 . exon 1359051 1359114 . + . ID=Thaps4565.1;Parent=Thaps4565;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1359242 1360997 . + 0 ID=Thaps4565;Parent=Thaps4565;rank=2 chr4 . exon 1359242 1360997 . + . ID=Thaps4565.2;Parent=Thaps4565;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1361020 1361023 . + 0 ID=Thaps4565;Parent=Thaps4565;rank=3 chr4 . exon 1361020 1361023 . + . ID=Thaps4565.3;Parent=Thaps4565;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 1364596 1366624 . + . ID=Thaps4567;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZN2];external_name=Thaps4567;logic_name=jgi_thaps3 chr4 ensembl transcript 1364596 1366624 . + . ID=Thaps4567;Parent=Thaps4567;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1364596 1365339 . + 0 ID=Thaps4567;Parent=Thaps4567;rank=1 chr4 . exon 1364596 1365339 . + . ID=Thaps4567.1;Parent=Thaps4567;constitutive=1;rank=1 chr4 . CDS 1365428 1366624 . + 0 ID=Thaps4567;Parent=Thaps4567;rank=2 chr4 . exon 1365428 1366624 . + . ID=Thaps4567.2;Parent=Thaps4567;constitutive=1;rank=2 chr4 . repeat_region 1373826 1373876 . ? . description=dust chr4 ensembl protein_coding_gene 1374224 1375468 . + . ID=Thaps262207;biotype=protein_coding;description=Serine/threonine deaminase [Source:UniProtKB/TrEMBL%3BAcc:B8BZN7];external_name=Thaps262207;logic_name=jgi_thaps3 chr4 ensembl transcript 1374224 1375468 . + . ID=Thaps262207;Parent=Thaps262207;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1374224 1374589 . + 0 ID=Thaps262207;Parent=Thaps262207;rank=1 chr4 . exon 1374224 1374589 . + . ID=Thaps262207.1;Parent=Thaps262207;constitutive=1;rank=1 chr4 . CDS 1374671 1375038 . + 0 ID=Thaps262207;Parent=Thaps262207;rank=2 chr4 . exon 1374671 1375038 . + . ID=Thaps262207.2;Parent=Thaps262207;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1375081 1375468 . + 0 ID=Thaps262207;Parent=Thaps262207;rank=3 chr4 . exon 1375081 1375468 . + . ID=Thaps262207.3;Parent=Thaps262207;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 1366714 1368150 . + . ID=Thaps4568;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZN3];external_name=Thaps4568;logic_name=jgi_thaps3 chr4 ensembl transcript 1366714 1368150 . + . ID=Thaps4568;Parent=Thaps4568;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1366714 1368150 . + 0 ID=Thaps4568;Parent=Thaps4568;rank=1 chr4 . exon 1366714 1368150 . + . ID=Thaps4568.1;Parent=Thaps4568;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1368598 1369367 . - . ID=Thaps4569;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZN4];external_name=Thaps4569;logic_name=jgi_thaps3 chr4 ensembl transcript 1368598 1369367 . - . ID=Thaps4569;Parent=Thaps4569;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1368598 1369162 . - 0 ID=Thaps4569;Parent=Thaps4569;rank=2 chr4 . exon 1368598 1369162 . - . ID=Thaps4569.2;Parent=Thaps4569;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1369264 1369367 . - 0 ID=Thaps4569;Parent=Thaps4569;rank=1 chr4 . exon 1369264 1369367 . - . ID=Thaps4569.1;Parent=Thaps4569;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1369801 1372266 . + . ID=Thaps4570;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZN5];external_name=Thaps4570;logic_name=jgi_thaps3 chr4 ensembl transcript 1369801 1372266 . + . ID=Thaps4570;Parent=Thaps4570;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1369801 1371119 . + 0 ID=Thaps4570;Parent=Thaps4570;rank=1 chr4 . exon 1369801 1371119 . + . ID=Thaps4570.1;Parent=Thaps4570;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1371153 1372266 . + 0 ID=Thaps4570;Parent=Thaps4570;rank=2 chr4 . exon 1371153 1372266 . + . ID=Thaps4570.2;Parent=Thaps4570;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1372522 1373517 . - . ID=Thaps4571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZN6];external_name=Thaps4571;logic_name=jgi_thaps3 chr4 ensembl transcript 1372522 1373517 . - . ID=Thaps4571;Parent=Thaps4571;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1372522 1373517 . - 0 ID=Thaps4571;Parent=Thaps4571;rank=1 chr4 . exon 1372522 1373517 . - . ID=Thaps4571.1;Parent=Thaps4571;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1376836 1379245 . + . ID=Thaps4573;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZN8];external_name=Thaps4573;logic_name=jgi_thaps3 chr4 ensembl transcript 1376836 1379245 . + . ID=Thaps4573;Parent=Thaps4573;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1376836 1378526 . + 0 ID=Thaps4573;Parent=Thaps4573;rank=1 chr4 . exon 1376836 1378526 . + . ID=Thaps4573.1;Parent=Thaps4573;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1378623 1378837 . + 0 ID=Thaps4573;Parent=Thaps4573;rank=2 chr4 . exon 1378623 1378837 . + . ID=Thaps4573.2;Parent=Thaps4573;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1378914 1379245 . + 0 ID=Thaps4573;Parent=Thaps4573;rank=3 chr4 . exon 1378914 1379245 . + . ID=Thaps4573.3;Parent=Thaps4573;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1380018 1382993 . + . ID=Thaps4574;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZN9];external_name=Thaps4574;logic_name=jgi_thaps3 chr4 ensembl transcript 1380018 1382993 . + . ID=Thaps4574;Parent=Thaps4574;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1380018 1380594 . + 0 ID=Thaps4574;Parent=Thaps4574;rank=1 chr4 . exon 1380018 1380594 . + . ID=Thaps4574.1;Parent=Thaps4574;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1380697 1382993 . + 0 ID=Thaps4574;Parent=Thaps4574;rank=2 chr4 . exon 1380697 1382993 . + . ID=Thaps4574.2;Parent=Thaps4574;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1383341 1384394 . + . ID=Thaps4575;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP0];external_name=Thaps4575;logic_name=jgi_thaps3 chr4 ensembl transcript 1383341 1384394 . + . ID=Thaps4575;Parent=Thaps4575;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1383341 1383423 . + 0 ID=Thaps4575;Parent=Thaps4575;rank=1 chr4 . exon 1383341 1383423 . + . ID=Thaps4575.1;Parent=Thaps4575;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1383501 1383695 . + 0 ID=Thaps4575;Parent=Thaps4575;rank=2 chr4 . exon 1383501 1383695 . + . ID=Thaps4575.2;Parent=Thaps4575;constitutive=1;rank=2 chr4 . CDS 1383773 1383937 . + 0 ID=Thaps4575;Parent=Thaps4575;rank=3 chr4 . exon 1383773 1383937 . + . ID=Thaps4575.3;Parent=Thaps4575;constitutive=1;rank=3 chr4 . CDS 1384025 1384394 . + 0 ID=Thaps4575;Parent=Thaps4575;rank=4 chr4 . exon 1384025 1384394 . + . ID=Thaps4575.4;Parent=Thaps4575;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 1384580 1386394 . - . ID=Thaps4576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP1];external_name=Thaps4576;logic_name=jgi_thaps3 chr4 ensembl transcript 1384580 1386394 . - . ID=Thaps4576;Parent=Thaps4576;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1384580 1385935 . - 0 ID=Thaps4576;Parent=Thaps4576;rank=3 chr4 . exon 1384580 1385935 . - . ID=Thaps4576.3;Parent=Thaps4576;constitutive=1;rank=3 chr4 . CDS 1386026 1386071 . - 0 ID=Thaps4576;Parent=Thaps4576;rank=2 chr4 . CDS 1386153 1386394 . - 0 ID=Thaps4576;Parent=Thaps4576;rank=1 chr4 . repeat_region 1390135 1390166 . ? . description=dust chr4 . repeat_region 1393811 1393859 . ? . description=trf chr4 ensembl protein_coding_gene 1386703 1389550 . + . ID=Thaps22318;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP2];external_name=Thaps22318;logic_name=jgi_thaps3 chr4 ensembl transcript 1386703 1389550 . + . ID=Thaps22318;Parent=Thaps22318;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1386703 1386821 . + 0 ID=Thaps22318;Parent=Thaps22318;rank=1 chr4 . exon 1386703 1386821 . + . ID=Thaps22318.1;Parent=Thaps22318;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1386867 1388798 . + 0 ID=Thaps22318;Parent=Thaps22318;rank=2 chr4 . exon 1386867 1388798 . + . ID=Thaps22318.2;Parent=Thaps22318;constitutive=1;rank=2 chr4 . CDS 1388907 1389042 . + 0 ID=Thaps22318;Parent=Thaps22318;rank=3 chr4 . exon 1388907 1389042 . + . ID=Thaps22318.3;Parent=Thaps22318;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1389089 1389550 . + 0 ID=Thaps22318;Parent=Thaps22318;rank=4 chr4 . exon 1389089 1389550 . + . ID=Thaps22318.4;Parent=Thaps22318;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 1391145 1393682 . - . ID=Thaps22319;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP4];external_name=Thaps22319;logic_name=jgi_thaps3 chr4 ensembl transcript 1391145 1393682 . - . ID=Thaps22319;Parent=Thaps22319;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1391145 1393682 . - 0 ID=Thaps22319;Parent=Thaps22319;rank=1 chr4 . exon 1391145 1393682 . - . ID=Thaps22319.1;Parent=Thaps22319;constitutive=1;rank=1 chr4 . exon 1386026 1386071 . - . ID=Thaps4576.2;Parent=Thaps4576;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 1386153 1386394 . - . ID=Thaps4576.1;Parent=Thaps4576;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1390442 1390912 . + . ID=Thaps4578;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP3];external_name=Thaps4578;logic_name=jgi_thaps3 chr4 ensembl transcript 1390442 1390912 . + . ID=Thaps4578;Parent=Thaps4578;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1390442 1390912 . + 0 ID=Thaps4578;Parent=Thaps4578;rank=1 chr4 . exon 1390442 1390912 . + . ID=Thaps4578.1;Parent=Thaps4578;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1393968 1395443 . + . ID=Thaps4580;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP5];external_name=Thaps4580;logic_name=jgi_thaps3 chr4 ensembl transcript 1393968 1395443 . + . ID=Thaps4580;Parent=Thaps4580;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1393968 1395443 . + 0 ID=Thaps4580;Parent=Thaps4580;rank=1 chr4 . exon 1393968 1395443 . + . ID=Thaps4580.1;Parent=Thaps4580;constitutive=1;rank=1 chr4 . repeat_region 1402886 1402937 . - . description=TE2a_TP chr4 . repeat_region 1402942 1403004 . - . description=TE2_TP chr4 . repeat_region 1403022 1403260 . - . description=TE2_TP chr4 . repeat_region 1403281 1403393 . - . description=TE2_TP chr4 . repeat_region 1403366 1403416 . + . description=TE2c_TP chr4 . repeat_region 1403420 1404314 . - . description=TE2c_TP chr4 . repeat_region 1405301 1405386 . - . description=Gypsy1I_TP chr4 . repeat_region 1405432 1405517 . - . description=Gypsy1I_TP chr4 ensembl protein_coding_gene 1398506 1400245 . - . ID=Thaps22321;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP7];external_name=Thaps22321;logic_name=jgi_thaps3 chr4 ensembl transcript 1398506 1400245 . - . ID=Thaps22321;Parent=Thaps22321;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1398506 1400245 . - 0 ID=Thaps22321;Parent=Thaps22321;rank=1 chr4 . exon 1398506 1400245 . - . ID=Thaps22321.1;Parent=Thaps22321;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1400682 1401446 . + . ID=Thaps22322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP8];external_name=Thaps22322;logic_name=jgi_thaps3 chr4 ensembl transcript 1400682 1401446 . + . ID=Thaps22322;Parent=Thaps22322;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1400682 1401446 . + 0 ID=Thaps22322;Parent=Thaps22322;rank=1 chr4 . exon 1400682 1401446 . + . ID=Thaps22322.1;Parent=Thaps22322;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1401907 1402711 . + . ID=Thaps22323;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP9];external_name=Thaps22323;logic_name=jgi_thaps3 chr4 ensembl transcript 1401907 1402711 . + . ID=Thaps22323;Parent=Thaps22323;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1401907 1402066 . + 0 ID=Thaps22323;Parent=Thaps22323;rank=1 chr4 . exon 1401907 1402066 . + . ID=Thaps22323.1;Parent=Thaps22323;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1402146 1402711 . + 0 ID=Thaps22323;Parent=Thaps22323;rank=2 chr4 . exon 1402146 1402711 . + . ID=Thaps22323.2;Parent=Thaps22323;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1396299 1396661 . - . ID=Thaps4581;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZP6];external_name=Thaps4581;logic_name=jgi_thaps3 chr4 ensembl transcript 1396299 1396661 . - . ID=Thaps4581;Parent=Thaps4581;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1396299 1396661 . - 0 ID=Thaps4581;Parent=Thaps4581;rank=1 chr4 . exon 1396299 1396661 . - . ID=Thaps4581.1;Parent=Thaps4581;constitutive=1;rank=1 chr4 . repeat_region 1405829 1405907 . - . description=Copia9I_TP chr4 . repeat_region 1409412 1409420 . ? . description=dust chr4 . repeat_region 1410822 1410829 . ? . description=dust chr4 . repeat_region 1413268 1413277 . ? . description=dust chr4 ensembl protein_coding_gene 1407550 1409325 . + . ID=Thaps22324;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ0];external_name=Thaps22324;logic_name=jgi_thaps3 chr4 ensembl transcript 1407550 1409325 . + . ID=Thaps22324;Parent=Thaps22324;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1407550 1409325 . + 0 ID=Thaps22324;Parent=Thaps22324;rank=1 chr4 . exon 1407550 1409325 . + . ID=Thaps22324.1;Parent=Thaps22324;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1411848 1413031 . - . ID=Thaps22325;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ2];external_name=Thaps22325;logic_name=jgi_thaps3 chr4 ensembl transcript 1411848 1413031 . - . ID=Thaps22325;Parent=Thaps22325;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1411848 1412594 . - 0 ID=Thaps22325;Parent=Thaps22325;rank=2 chr4 . exon 1411848 1412594 . - . ID=Thaps22325.2;Parent=Thaps22325;constitutive=1;rank=2 chr4 . CDS 1412681 1413031 . - 0 ID=Thaps22325;Parent=Thaps22325;rank=1 chr4 . exon 1412681 1413031 . - . ID=Thaps22325.1;Parent=Thaps22325;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1413366 1414515 . + . ID=Thaps268713;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ3];external_name=Thaps268713;logic_name=jgi_thaps3 chr4 ensembl transcript 1413366 1414515 . + . ID=Thaps268713;Parent=Thaps268713;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1413366 1413704 . + 0 ID=Thaps268713;Parent=Thaps268713;rank=1 chr4 . exon 1413366 1413704 . + . ID=Thaps268713.1;Parent=Thaps268713;constitutive=1;rank=1 chr4 . CDS 1413785 1414031 . + 0 ID=Thaps268713;Parent=Thaps268713;rank=2 chr4 . exon 1413785 1414031 . + . ID=Thaps268713.2;Parent=Thaps268713;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1414118 1414515 . + 0 ID=Thaps268713;Parent=Thaps268713;rank=3 chr4 . exon 1414118 1414515 . + . ID=Thaps268713.3;Parent=Thaps268713;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1409614 1410138 . - . ID=Thaps33466;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ1];external_name=Thaps33466;logic_name=jgi_thaps3 chr4 ensembl transcript 1409614 1410138 . - . ID=Thaps33466;Parent=Thaps33466;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1409614 1409890 . - 0 ID=Thaps33466;Parent=Thaps33466;rank=2 chr4 . exon 1409614 1409890 . - . ID=Thaps33466.2;Parent=Thaps33466;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1409975 1410138 . - 0 ID=Thaps33466;Parent=Thaps33466;rank=1 chr4 . exon 1409975 1410138 . - . ID=Thaps33466.1;Parent=Thaps33466;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1415087 1416127 . - . ID=Thaps4589;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ4];external_name=Thaps4589;logic_name=jgi_thaps3 chr4 ensembl transcript 1415087 1416127 . - . ID=Thaps4589;Parent=Thaps4589;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1415087 1416127 . - 0 ID=Thaps4589;Parent=Thaps4589;rank=1 chr4 . exon 1415087 1416127 . - . ID=Thaps4589.1;Parent=Thaps4589;constitutive=1;rank=1 chr4 . repeat_region 1416486 1416520 . ? . description=trf chr4 ensembl protein_coding_gene 1422609 1424811 . + . ID=Thaps268714;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ7];external_name=Thaps268714;logic_name=jgi_thaps3 chr4 ensembl transcript 1422609 1424811 . + . ID=Thaps268714;Parent=Thaps268714;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1422609 1422726 . + 0 ID=Thaps268714;Parent=Thaps268714;rank=1 chr4 . exon 1422609 1422726 . + . ID=Thaps268714.1;Parent=Thaps268714;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1422830 1423152 . + 0 ID=Thaps268714;Parent=Thaps268714;rank=2 chr4 . exon 1422830 1423152 . + . ID=Thaps268714.2;Parent=Thaps268714;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1423192 1423268 . + 0 ID=Thaps268714;Parent=Thaps268714;rank=3 chr4 . exon 1423192 1423268 . + . ID=Thaps268714.3;Parent=Thaps268714;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1423320 1423471 . + 0 ID=Thaps268714;Parent=Thaps268714;rank=4 chr4 . exon 1423320 1423471 . + . ID=Thaps268714.4;Parent=Thaps268714;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1423490 1423794 . + 0 ID=Thaps268714;Parent=Thaps268714;rank=5 chr4 . exon 1423490 1423794 . + . ID=Thaps268714.5;Parent=Thaps268714;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1423901 1424524 . + 0 ID=Thaps268714;Parent=Thaps268714;rank=6 chr4 . exon 1423901 1424524 . + . ID=Thaps268714.6;Parent=Thaps268714;constitutive=1;rank=6 chr4 . CDS 1424617 1424811 . + 0 ID=Thaps268714;Parent=Thaps268714;rank=7 chr4 . exon 1424617 1424811 . + . ID=Thaps268714.7;Parent=Thaps268714;constitutive=1;rank=7 chr4 ensembl protein_coding_gene 1418414 1418896 . - . ID=Thaps33513;biotype=protein_coding;description=Cyclin putative cyclin [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ6];external_name=Thaps33513;logic_name=jgi_thaps3 chr4 ensembl transcript 1418414 1418896 . - . ID=Thaps33513;Parent=Thaps33513;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1418414 1418896 . - 0 ID=Thaps33513;Parent=Thaps33513;rank=1 chr4 . exon 1418414 1418896 . - . ID=Thaps33513.1;Parent=Thaps33513;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1416605 1417558 . + . ID=Thaps4590;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ5];external_name=Thaps4590;logic_name=jgi_thaps3 chr4 ensembl transcript 1416605 1417558 . + . ID=Thaps4590;Parent=Thaps4590;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1416605 1417558 . + 0 ID=Thaps4590;Parent=Thaps4590;rank=1 chr4 . exon 1416605 1417558 . + . ID=Thaps4590.1;Parent=Thaps4590;constitutive=1;rank=1 chr4 . repeat_region 1427552 1427614 . ? . description=dust chr4 ensembl protein_coding_gene 1425866 1427311 . + . ID=Thaps22328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ8];external_name=Thaps22328;logic_name=jgi_thaps3 chr4 ensembl transcript 1425866 1427311 . + . ID=Thaps22328;Parent=Thaps22328;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1425866 1427311 . + 0 ID=Thaps22328;Parent=Thaps22328;rank=1 chr4 . exon 1425866 1427311 . + . ID=Thaps22328.1;Parent=Thaps22328;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1428324 1432011 . + . ID=Thaps33425;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZQ9];external_name=Thaps33425;logic_name=jgi_thaps3 chr4 ensembl transcript 1428324 1432011 . + . ID=Thaps33425;Parent=Thaps33425;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1428324 1429262 . + 0 ID=Thaps33425;Parent=Thaps33425;rank=1 chr4 . exon 1428324 1429262 . + . ID=Thaps33425.1;Parent=Thaps33425;constitutive=1;rank=1 chr4 . CDS 1429341 1429516 . + 0 ID=Thaps33425;Parent=Thaps33425;rank=2 chr4 . exon 1429341 1429516 . + . ID=Thaps33425.2;Parent=Thaps33425;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1429574 1429840 . + 0 ID=Thaps33425;Parent=Thaps33425;rank=3 chr4 . exon 1429574 1429840 . + . ID=Thaps33425.3;Parent=Thaps33425;constitutive=1;rank=3 chr4 . CDS 1429892 1430201 . + 0 ID=Thaps33425;Parent=Thaps33425;rank=4 chr4 . exon 1429892 1430201 . + . ID=Thaps33425.4;Parent=Thaps33425;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1430265 1431387 . + 0 ID=Thaps33425;Parent=Thaps33425;rank=5 chr4 . exon 1430265 1431387 . + . ID=Thaps33425.5;Parent=Thaps33425;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 1431464 1432011 . + 0 ID=Thaps33425;Parent=Thaps33425;rank=6 chr4 . exon 1431464 1432011 . + . ID=Thaps33425.6;Parent=Thaps33425;constitutive=1;ensembl_end_phase=2;rank=6 chr4 ensembl protein_coding_gene 1432607 1435645 . - . ID=Thaps4596;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZR0];external_name=Thaps4596;logic_name=jgi_thaps3 chr4 ensembl transcript 1432607 1435645 . - . ID=Thaps4596;Parent=Thaps4596;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1432607 1435645 . - 0 ID=Thaps4596;Parent=Thaps4596;rank=1 chr4 . exon 1432607 1435645 . - . ID=Thaps4596.1;Parent=Thaps4596;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1440317 1441575 . + . ID=Thaps22332;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZR2];external_name=Thaps22332;logic_name=jgi_thaps3 chr4 ensembl transcript 1440317 1441575 . + . ID=Thaps22332;Parent=Thaps22332;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1440317 1440873 . + 0 ID=Thaps22332;Parent=Thaps22332;rank=1 chr4 . exon 1440317 1440873 . + . ID=Thaps22332.1;Parent=Thaps22332;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1440978 1441575 . + 0 ID=Thaps22332;Parent=Thaps22332;rank=2 chr4 . exon 1440978 1441575 . + . ID=Thaps22332.2;Parent=Thaps22332;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1444632 1451674 . + . ID=Thaps22333;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZR4];external_name=Thaps22333;logic_name=jgi_thaps3 chr4 ensembl transcript 1444632 1451674 . + . ID=Thaps22333;Parent=Thaps22333;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1444632 1444730 . + 0 ID=Thaps22333;Parent=Thaps22333;rank=1 chr4 . exon 1444632 1444730 . + . ID=Thaps22333.1;Parent=Thaps22333;constitutive=1;rank=1 chr4 . CDS 1444806 1446749 . + 0 ID=Thaps22333;Parent=Thaps22333;rank=2 chr4 . exon 1444806 1446749 . + . ID=Thaps22333.2;Parent=Thaps22333;constitutive=1;rank=2 chr4 . CDS 1446817 1450984 . + 0 ID=Thaps22333;Parent=Thaps22333;rank=3 chr4 . CDS 1451070 1451674 . + 0 ID=Thaps22333;Parent=Thaps22333;rank=4 chr4 ensembl protein_coding_gene 1437640 1439093 . + . ID=Thaps25953;biotype=protein_coding;description=Malate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BZR1];external_name=MDH2;logic_name=jgi_thaps3 chr4 ensembl transcript 1437640 1439093 . + . ID=Thaps25953;Parent=Thaps25953;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1437640 1437859 . + 0 ID=Thaps25953;Parent=Thaps25953;rank=1 chr4 . exon 1437640 1437859 . + . ID=Thaps25953.1;Parent=Thaps25953;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1437956 1438078 . + 0 ID=Thaps25953;Parent=Thaps25953;rank=2 chr4 . exon 1437956 1438078 . + . ID=Thaps25953.2;Parent=Thaps25953;constitutive=1;rank=2 chr4 . CDS 1438172 1438205 . + 0 ID=Thaps25953;Parent=Thaps25953;rank=3 chr4 . exon 1438172 1438205 . + . ID=Thaps25953.3;Parent=Thaps25953;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1438298 1438858 . + 0 ID=Thaps25953;Parent=Thaps25953;rank=4 chr4 . exon 1438298 1438858 . + . ID=Thaps25953.4;Parent=Thaps25953;constitutive=1;rank=4 chr4 . CDS 1438937 1439093 . + 0 ID=Thaps25953;Parent=Thaps25953;rank=5 chr4 . exon 1438937 1439093 . + . ID=Thaps25953.5;Parent=Thaps25953;constitutive=1;ensembl_end_phase=1;rank=5 chr4 ensembl protein_coding_gene 1441956 1442756 . - . ID=Thaps4599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZR3];external_name=Thaps4599;logic_name=jgi_thaps3 chr4 ensembl transcript 1441956 1442756 . - . ID=Thaps4599;Parent=Thaps4599;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1441956 1442756 . - 0 ID=Thaps4599;Parent=Thaps4599;rank=1 chr4 . exon 1441956 1442756 . - . ID=Thaps4599.1;Parent=Thaps4599;constitutive=1;rank=1 chr4 . exon 1446817 1450984 . + . ID=Thaps22333.3;Parent=Thaps22333;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . exon 1451070 1451674 . + . ID=Thaps22333.4;Parent=Thaps22333;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 1451825 1452692 . - . ID=Thaps262215;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZR5];external_name=Thaps262215;logic_name=jgi_thaps3 chr4 ensembl transcript 1451825 1452692 . - . ID=Thaps262215;Parent=Thaps262215;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1451825 1452295 . - 0 ID=Thaps262215;Parent=Thaps262215;rank=2 chr4 . exon 1451825 1452295 . - . ID=Thaps262215.2;Parent=Thaps262215;constitutive=1;rank=2 chr4 . CDS 1452393 1452692 . - 0 ID=Thaps262215;Parent=Thaps262215;rank=1 chr4 . exon 1452393 1452692 . - . ID=Thaps262215.1;Parent=Thaps262215;constitutive=1;rank=1 chr4 . repeat_region 1457551 1457558 . ? . description=dust chr4 . repeat_region 1459847 1459871 . ? . description=trf chr4 ensembl protein_coding_gene 1456813 1458102 . + . ID=Thaps22334;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZR6];external_name=Thaps22334;logic_name=jgi_thaps3 chr4 ensembl transcript 1456813 1458102 . + . ID=Thaps22334;Parent=Thaps22334;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1456813 1458102 . + 0 ID=Thaps22334;Parent=Thaps22334;rank=1 chr4 . exon 1456813 1458102 . + . ID=Thaps22334.1;Parent=Thaps22334;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1463046 1464959 . + . ID=Thaps268718;biotype=protein_coding;description=Asparagine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BZR9];external_name=ANS1;logic_name=jgi_thaps3 chr4 ensembl transcript 1463046 1464959 . + . ID=Thaps268718;Parent=Thaps268718;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1463046 1463726 . + 0 ID=Thaps268718;Parent=Thaps268718;rank=1 chr4 . exon 1463046 1463726 . + . ID=Thaps268718.1;Parent=Thaps268718;constitutive=1;rank=1 chr4 . CDS 1463844 1464464 . + 0 ID=Thaps268718;Parent=Thaps268718;rank=2 chr4 . exon 1463844 1464464 . + . ID=Thaps268718.2;Parent=Thaps268718;constitutive=1;rank=2 chr4 . CDS 1464489 1464959 . + 0 ID=Thaps268718;Parent=Thaps268718;rank=3 chr4 . exon 1464489 1464959 . + . ID=Thaps268718.3;Parent=Thaps268718;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 1458207 1459223 . - . ID=Thaps4603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZR7];external_name=Thaps4603;logic_name=jgi_thaps3 chr4 ensembl transcript 1458207 1459223 . - . ID=Thaps4603;Parent=Thaps4603;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1458207 1459223 . - 0 ID=Thaps4603;Parent=Thaps4603;rank=1 chr4 . exon 1458207 1459223 . - . ID=Thaps4603.1;Parent=Thaps4603;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1459498 1460766 . + . ID=Thaps4604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZR8];external_name=Thaps4604;logic_name=jgi_thaps3 chr4 ensembl transcript 1459498 1460766 . + . ID=Thaps4604;Parent=Thaps4604;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1459498 1460766 . + 0 ID=Thaps4604;Parent=Thaps4604;rank=1 chr4 . exon 1459498 1460766 . + . ID=Thaps4604.1;Parent=Thaps4604;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1467517 1468839 . + . ID=Thaps262217;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS0];external_name=Thaps262217;logic_name=jgi_thaps3 chr4 ensembl transcript 1467517 1468839 . + . ID=Thaps262217;Parent=Thaps262217;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1467517 1467571 . + 0 ID=Thaps262217;Parent=Thaps262217;rank=1 chr4 . exon 1467517 1467571 . + . ID=Thaps262217.1;Parent=Thaps262217;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1467644 1467846 . + 0 ID=Thaps262217;Parent=Thaps262217;rank=2 chr4 . exon 1467644 1467846 . + . ID=Thaps262217.2;Parent=Thaps262217;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1467919 1468570 . + 0 ID=Thaps262217;Parent=Thaps262217;rank=3 chr4 . exon 1467919 1468570 . + . ID=Thaps262217.3;Parent=Thaps262217;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1468654 1468839 . + 0 ID=Thaps262217;Parent=Thaps262217;rank=4 chr4 . exon 1468654 1468839 . + . ID=Thaps262217.4;Parent=Thaps262217;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 1474645 1474995 . + . ID=Thaps33855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS4];external_name=Thaps33855;logic_name=jgi_thaps3 chr4 ensembl transcript 1474645 1474995 . + . ID=Thaps33855;Parent=Thaps33855;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1474645 1474995 . + 0 ID=Thaps33855;Parent=Thaps33855;rank=1 chr4 . exon 1474645 1474995 . + . ID=Thaps33855.1;Parent=Thaps33855;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1469409 1470452 . - . ID=Thaps4607;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS1];external_name=Thaps4607;logic_name=jgi_thaps3 chr4 ensembl transcript 1469409 1470452 . - . ID=Thaps4607;Parent=Thaps4607;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1469409 1470452 . - 0 ID=Thaps4607;Parent=Thaps4607;rank=1 chr4 . exon 1469409 1470452 . - . ID=Thaps4607.1;Parent=Thaps4607;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1471258 1471680 . - . ID=Thaps4608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS2];external_name=Thaps4608;logic_name=jgi_thaps3 chr4 ensembl transcript 1471258 1471680 . - . ID=Thaps4608;Parent=Thaps4608;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1471258 1471680 . - 0 ID=Thaps4608;Parent=Thaps4608;rank=1 chr4 . exon 1471258 1471680 . - . ID=Thaps4608.1;Parent=Thaps4608;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1471977 1472906 . + . ID=Thaps4609;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS3];external_name=Thaps4609;logic_name=jgi_thaps3 chr4 ensembl transcript 1471977 1472906 . + . ID=Thaps4609;Parent=Thaps4609;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1471977 1472906 . + 0 ID=Thaps4609;Parent=Thaps4609;rank=1 chr4 . exon 1471977 1472906 . + . ID=Thaps4609.1;Parent=Thaps4609;constitutive=1;rank=1 chr4 . repeat_region 1477025 1477071 . ? . description=trf chr4 . repeat_region 1477037 1477077 . ? . description=trf chr4 . repeat_region 1477044 1477087 . ? . description=trf chr4 . repeat_region 1479942 1480090 . ? . description=trf chr4 ensembl protein_coding_gene 1475639 1477558 . + . ID=Thaps22336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS5];external_name=Thaps22336;logic_name=jgi_thaps3 chr4 ensembl transcript 1475639 1477558 . + . ID=Thaps22336;Parent=Thaps22336;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1475639 1477558 . + 0 ID=Thaps22336;Parent=Thaps22336;rank=1 chr4 . exon 1475639 1477558 . + . ID=Thaps22336.1;Parent=Thaps22336;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1479705 1480549 . - . ID=Thaps22337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS7];external_name=Thaps22337;logic_name=jgi_thaps3 chr4 ensembl transcript 1479705 1480549 . - . ID=Thaps22337;Parent=Thaps22337;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1479705 1480270 . - 0 ID=Thaps22337;Parent=Thaps22337;rank=2 chr4 . exon 1479705 1480270 . - . ID=Thaps22337.2;Parent=Thaps22337;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1480471 1480549 . - 0 ID=Thaps22337;Parent=Thaps22337;rank=1 chr4 . exon 1480471 1480549 . - . ID=Thaps22337.1;Parent=Thaps22337;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1480921 1481541 . + . ID=Thaps22338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS8];external_name=Thaps22338;logic_name=jgi_thaps3 chr4 ensembl transcript 1480921 1481541 . + . ID=Thaps22338;Parent=Thaps22338;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1480921 1481541 . + 0 ID=Thaps22338;Parent=Thaps22338;rank=1 chr4 . exon 1480921 1481541 . + . ID=Thaps22338.1;Parent=Thaps22338;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1482200 1484142 . + . ID=Thaps22339;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS9];external_name=Thaps22339;logic_name=jgi_thaps3 chr4 ensembl transcript 1482200 1484142 . + . ID=Thaps22339;Parent=Thaps22339;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1482200 1483451 . + 0 ID=Thaps22339;Parent=Thaps22339;rank=1 chr4 . exon 1482200 1483451 . + . ID=Thaps22339.1;Parent=Thaps22339;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1483550 1484142 . + 0 ID=Thaps22339;Parent=Thaps22339;rank=2 chr4 . exon 1483550 1484142 . + . ID=Thaps22339.2;Parent=Thaps22339;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1477722 1479281 . - . ID=Thaps4612;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZS6];external_name=Thaps4612;logic_name=jgi_thaps3 chr4 ensembl transcript 1477722 1479281 . - . ID=Thaps4612;Parent=Thaps4612;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1477722 1478273 . - 0 ID=Thaps4612;Parent=Thaps4612;rank=3 chr4 . exon 1477722 1478273 . - . ID=Thaps4612.3;Parent=Thaps4612;constitutive=1;rank=3 chr4 . CDS 1478347 1478785 . - 0 ID=Thaps4612;Parent=Thaps4612;rank=2 chr4 . exon 1478347 1478785 . - . ID=Thaps4612.2;Parent=Thaps4612;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1478824 1479281 . - 0 ID=Thaps4612;Parent=Thaps4612;rank=1 chr4 . exon 1478824 1479281 . - . ID=Thaps4612.1;Parent=Thaps4612;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1484349 1485573 . - . ID=Thaps4616;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZT0];external_name=Thaps4616;logic_name=jgi_thaps3 chr4 ensembl transcript 1484349 1485573 . - . ID=Thaps4616;Parent=Thaps4616;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1484349 1484526 . - 0 ID=Thaps4616;Parent=Thaps4616;rank=3 chr4 . exon 1484349 1484526 . - . ID=Thaps4616.3;Parent=Thaps4616;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1484656 1485319 . - 0 ID=Thaps4616;Parent=Thaps4616;rank=2 chr4 . exon 1484656 1485319 . - . ID=Thaps4616.2;Parent=Thaps4616;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1485417 1485573 . - 0 ID=Thaps4616;Parent=Thaps4616;rank=1 chr4 . repeat_region 1490538 1490548 . ? . description=dust chr4 ensembl protein_coding_gene 1493546 1495870 . - . ID=Thaps33454;biotype=protein_coding;description=Acetyl-coenzyme a synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BZT4];external_name=ACS2_2;logic_name=jgi_thaps3 chr4 ensembl transcript 1493546 1495870 . - . ID=Thaps33454;Parent=Thaps33454;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1493546 1493704 . - 0 ID=Thaps33454;Parent=Thaps33454;rank=4 chr4 . exon 1493546 1493704 . - . ID=Thaps33454.4;Parent=Thaps33454;constitutive=1;rank=4 chr4 . CDS 1493792 1493922 . - 0 ID=Thaps33454;Parent=Thaps33454;rank=3 chr4 . exon 1493792 1493922 . - . ID=Thaps33454.3;Parent=Thaps33454;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1494038 1494904 . - 0 ID=Thaps33454;Parent=Thaps33454;rank=2 chr4 . exon 1494038 1494904 . - . ID=Thaps33454.2;Parent=Thaps33454;constitutive=1;rank=2 chr4 . CDS 1495000 1495870 . - 0 ID=Thaps33454;Parent=Thaps33454;rank=1 chr4 . exon 1495000 1495870 . - . ID=Thaps33454.1;Parent=Thaps33454;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1492595 1493272 . + . ID=Thaps33977;biotype=protein_coding;description=60S ribosomal protein L36 [Source:UniProtKB/TrEMBL%3BAcc:B8BZT3];external_name=RL36;logic_name=jgi_thaps3 chr4 ensembl transcript 1492595 1493272 . + . ID=Thaps33977;Parent=Thaps33977;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1492595 1492684 . + 0 ID=Thaps33977;Parent=Thaps33977;rank=1 chr4 . exon 1492595 1492684 . + . ID=Thaps33977.1;Parent=Thaps33977;constitutive=1;rank=1 chr4 . CDS 1493042 1493272 . + 0 ID=Thaps33977;Parent=Thaps33977;rank=2 chr4 . exon 1493042 1493272 . + . ID=Thaps33977.2;Parent=Thaps33977;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1486590 1490280 . + . ID=Thaps40385;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BZT1];external_name=Thaps40385;logic_name=jgi_thaps3 chr4 ensembl transcript 1486590 1490280 . + . ID=Thaps40385;Parent=Thaps40385;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1486590 1487288 . + 0 ID=Thaps40385;Parent=Thaps40385;rank=1 chr4 . exon 1486590 1487288 . + . ID=Thaps40385.1;Parent=Thaps40385;constitutive=1;rank=1 chr4 . CDS 1487475 1489917 . + 0 ID=Thaps40385;Parent=Thaps40385;rank=2 chr4 . exon 1487475 1489917 . + . ID=Thaps40385.2;Parent=Thaps40385;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1489991 1490280 . + 0 ID=Thaps40385;Parent=Thaps40385;rank=3 chr4 . exon 1489991 1490280 . + . ID=Thaps40385.3;Parent=Thaps40385;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1491563 1491904 . - . ID=Thaps40387;biotype=protein_coding;description=RL34%2C ribosomal protein 34 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BZT2];external_name=RL34;logic_name=jgi_thaps3 chr4 ensembl transcript 1491563 1491904 . - . ID=Thaps40387;Parent=Thaps40387;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1491563 1491904 . - 0 ID=Thaps40387;Parent=Thaps40387;rank=1 chr4 . exon 1491563 1491904 . - . ID=Thaps40387.1;Parent=Thaps40387;constitutive=1;rank=1 chr4 . exon 1485417 1485573 . - . ID=Thaps4616.1;Parent=Thaps4616;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1500512 1502122 . + . ID=Thaps22345;biotype=protein_coding;description=Pyruvate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BZT7];external_name=PYK2;logic_name=jgi_thaps3 chr4 ensembl transcript 1500512 1502122 . + . ID=Thaps22345;Parent=Thaps22345;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1500512 1502122 . + 0 ID=Thaps22345;Parent=Thaps22345;rank=1 chr4 . exon 1500512 1502122 . + . ID=Thaps22345.1;Parent=Thaps22345;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1504764 1507509 . - . ID=Thaps22347;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZT9];external_name=Thaps22347;logic_name=jgi_thaps3 chr4 ensembl transcript 1504764 1507509 . - . ID=Thaps22347;Parent=Thaps22347;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1504764 1506218 . - 0 ID=Thaps22347;Parent=Thaps22347;rank=3 chr4 . exon 1504764 1506218 . - . ID=Thaps22347.3;Parent=Thaps22347;constitutive=1;rank=3 chr4 . CDS 1506246 1506691 . - 0 ID=Thaps22347;Parent=Thaps22347;rank=2 chr4 . CDS 1506786 1507509 . - 0 ID=Thaps22347;Parent=Thaps22347;rank=1 chr4 ensembl protein_coding_gene 1496391 1497986 . - . ID=Thaps40391;biotype=protein_coding;description=Enolase [Source:UniProtKB/TrEMBL%3BAcc:B8BZT5];external_name=ENO1;logic_name=jgi_thaps3 chr4 ensembl transcript 1496391 1497986 . - . ID=Thaps40391;Parent=Thaps40391;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1496391 1497180 . - 0 ID=Thaps40391;Parent=Thaps40391;rank=3 chr4 . exon 1496391 1497180 . - . ID=Thaps40391.3;Parent=Thaps40391;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1497273 1497471 . - 0 ID=Thaps40391;Parent=Thaps40391;rank=2 chr4 . exon 1497273 1497471 . - . ID=Thaps40391.2;Parent=Thaps40391;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1497653 1497986 . - 0 ID=Thaps40391;Parent=Thaps40391;rank=1 chr4 . exon 1497653 1497986 . - . ID=Thaps40391.1;Parent=Thaps40391;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1498539 1500176 . - . ID=Thaps40393;biotype=protein_coding;description=Pyruvate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BZT6];external_name=PYK1;logic_name=jgi_thaps3 chr4 ensembl transcript 1498539 1500176 . - . ID=Thaps40393;Parent=Thaps40393;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1498539 1499800 . - 0 ID=Thaps40393;Parent=Thaps40393;rank=2 chr4 . exon 1498539 1499800 . - . ID=Thaps40393.2;Parent=Thaps40393;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1499906 1500176 . - 0 ID=Thaps40393;Parent=Thaps40393;rank=1 chr4 . exon 1499906 1500176 . - . ID=Thaps40393.1;Parent=Thaps40393;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1502670 1504680 . + . ID=Thaps4624;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZT8];external_name=Thaps4624;logic_name=jgi_thaps3 chr4 ensembl transcript 1502670 1504680 . + . ID=Thaps4624;Parent=Thaps4624;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1502670 1504412 . + 0 ID=Thaps4624;Parent=Thaps4624;rank=1 chr4 . exon 1502670 1504412 . + . ID=Thaps4624.1;Parent=Thaps4624;constitutive=1;rank=1 chr4 . CDS 1504465 1504680 . + 0 ID=Thaps4624;Parent=Thaps4624;rank=2 chr4 . exon 1504465 1504680 . + . ID=Thaps4624.2;Parent=Thaps4624;constitutive=1;rank=2 chr4 . repeat_region 1508678 1508732 . ? . description=dust chr4 . repeat_region 1509090 1509172 . ? . description=dust chr4 . repeat_region 1509105 1509154 . ? . description=trf chr4 . repeat_region 1509122 1509172 . ? . description=trf chr4 . exon 1506246 1506691 . - . ID=Thaps22347.2;Parent=Thaps22347;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . exon 1506786 1507509 . - . ID=Thaps22347.1;Parent=Thaps22347;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1511490 1512779 . + . ID=Thaps22348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZU2];external_name=Thaps22348;logic_name=jgi_thaps3 chr4 ensembl transcript 1511490 1512779 . + . ID=Thaps22348;Parent=Thaps22348;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1511490 1512779 . + 0 ID=Thaps22348;Parent=Thaps22348;rank=1 chr4 . exon 1511490 1512779 . + . ID=Thaps22348.1;Parent=Thaps22348;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1513691 1514619 . - . ID=Thaps262229;biotype=protein_coding;description=Probable trans-2-enoyl-coa reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BZU4];external_name=ECR1;logic_name=jgi_thaps3 chr4 ensembl transcript 1513691 1514619 . - . ID=Thaps262229;Parent=Thaps262229;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1513691 1513818 . - 0 ID=Thaps262229;Parent=Thaps262229;rank=5 chr4 . exon 1513691 1513818 . - . ID=Thaps262229.5;Parent=Thaps262229;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1513834 1514212 . - 0 ID=Thaps262229;Parent=Thaps262229;rank=4 chr4 . exon 1513834 1514212 . - . ID=Thaps262229.4;Parent=Thaps262229;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1514289 1514407 . - 0 ID=Thaps262229;Parent=Thaps262229;rank=3 chr4 . exon 1514289 1514407 . - . ID=Thaps262229.3;Parent=Thaps262229;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1514444 1514515 . - 0 ID=Thaps262229;Parent=Thaps262229;rank=2 chr4 . exon 1514444 1514515 . - . ID=Thaps262229.2;Parent=Thaps262229;constitutive=1;rank=2 chr4 . CDS 1514580 1514619 . - 0 ID=Thaps262229;Parent=Thaps262229;rank=1 chr4 . exon 1514580 1514619 . - . ID=Thaps262229.1;Parent=Thaps262229;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1507917 1508225 . - . ID=Thaps33340;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZU0];external_name=Thaps33340;logic_name=jgi_thaps3 chr4 ensembl transcript 1507917 1508225 . - . ID=Thaps33340;Parent=Thaps33340;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1507917 1508225 . - 0 ID=Thaps33340;Parent=Thaps33340;rank=1 chr4 . exon 1507917 1508225 . - . ID=Thaps33340.1;Parent=Thaps33340;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1509835 1511106 . - . ID=Thaps33937;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZU1];external_name=Thaps33937;logic_name=jgi_thaps3 chr4 ensembl transcript 1509835 1511106 . - . ID=Thaps33937;Parent=Thaps33937;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1509835 1510313 . - 0 ID=Thaps33937;Parent=Thaps33937;rank=2 chr4 . exon 1509835 1510313 . - . ID=Thaps33937.2;Parent=Thaps33937;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1510644 1511106 . - 0 ID=Thaps33937;Parent=Thaps33937;rank=1 chr4 . exon 1510644 1511106 . - . ID=Thaps33937.1;Parent=Thaps33937;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1512941 1513486 . + . ID=Thaps4629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZU3];external_name=Thaps4629;logic_name=jgi_thaps3 chr4 ensembl transcript 1512941 1513486 . + . ID=Thaps4629;Parent=Thaps4629;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1512941 1513486 . + 0 ID=Thaps4629;Parent=Thaps4629;rank=1 chr4 . exon 1512941 1513486 . + . ID=Thaps4629.1;Parent=Thaps4629;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1514953 1515294 . - . ID=Thaps4630;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZU5];external_name=Thaps4630;logic_name=jgi_thaps3 chr4 ensembl transcript 1514953 1515294 . - . ID=Thaps4630;Parent=Thaps4630;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1514953 1515294 . - 0 ID=Thaps4630;Parent=Thaps4630;rank=1 chr4 . exon 1514953 1515294 . - . ID=Thaps4630.1;Parent=Thaps4630;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1515989 1519024 . - . ID=Thaps22349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZU6];external_name=Thaps22349;logic_name=jgi_thaps3 chr4 ensembl transcript 1515989 1519024 . - . ID=Thaps22349;Parent=Thaps22349;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1515989 1516842 . - 0 ID=Thaps22349;Parent=Thaps22349;rank=3 chr4 . exon 1515989 1516842 . - . ID=Thaps22349.3;Parent=Thaps22349;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1516943 1518434 . - 0 ID=Thaps22349;Parent=Thaps22349;rank=2 chr4 . exon 1516943 1518434 . - . ID=Thaps22349.2;Parent=Thaps22349;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1518953 1519024 . - 0 ID=Thaps22349;Parent=Thaps22349;rank=1 chr4 . exon 1518953 1519024 . - . ID=Thaps22349.1;Parent=Thaps22349;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1520676 1523998 . + . ID=Thaps4632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZU7];external_name=Thaps4632;logic_name=jgi_thaps3 chr4 ensembl transcript 1520676 1523998 . + . ID=Thaps4632;Parent=Thaps4632;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1520676 1522599 . + 0 ID=Thaps4632;Parent=Thaps4632;rank=1 chr4 . exon 1520676 1522599 . + . ID=Thaps4632.1;Parent=Thaps4632;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1522687 1522928 . + 0 ID=Thaps4632;Parent=Thaps4632;rank=2 chr4 . exon 1522687 1522928 . + . ID=Thaps4632.2;Parent=Thaps4632;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1523013 1523201 . + 0 ID=Thaps4632;Parent=Thaps4632;rank=3 chr4 . exon 1523013 1523201 . + . ID=Thaps4632.3;Parent=Thaps4632;constitutive=1;rank=3 chr4 . CDS 1523276 1523998 . + 0 ID=Thaps4632;Parent=Thaps4632;rank=4 chr4 . exon 1523276 1523998 . + . ID=Thaps4632.4;Parent=Thaps4632;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 1524663 1525331 . + . ID=Thaps4633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZU8];external_name=Thaps4633;logic_name=jgi_thaps3 chr4 ensembl transcript 1524663 1525331 . + . ID=Thaps4633;Parent=Thaps4633;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1524663 1525331 . + 0 ID=Thaps4633;Parent=Thaps4633;rank=1 chr4 . exon 1524663 1525331 . + . ID=Thaps4633.1;Parent=Thaps4633;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1526371 1526625 . + . ID=Thaps22350;biotype=protein_coding;description=40S ribosomal protein S21 [Source:UniProtKB/TrEMBL%3BAcc:B8BZU9];external_name=RS21;logic_name=jgi_thaps3 chr4 ensembl transcript 1526371 1526625 . + . ID=Thaps22350;Parent=Thaps22350;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1526371 1526625 . + 0 ID=Thaps22350;Parent=Thaps22350;rank=1 chr4 . exon 1526371 1526625 . + . ID=Thaps22350.1;Parent=Thaps22350;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1529303 1530625 . + . ID=Thaps22351;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZV1];external_name=Thaps22351;logic_name=jgi_thaps3 chr4 ensembl transcript 1529303 1530625 . + . ID=Thaps22351;Parent=Thaps22351;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1529303 1530625 . + 0 ID=Thaps22351;Parent=Thaps22351;rank=1 chr4 . exon 1529303 1530625 . + . ID=Thaps22351.1;Parent=Thaps22351;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1534048 1536546 . - . ID=Thaps22354;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZV3];external_name=Thaps22354;logic_name=jgi_thaps3 chr4 ensembl transcript 1534048 1536546 . - . ID=Thaps22354;Parent=Thaps22354;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1534048 1536546 . - 0 ID=Thaps22354;Parent=Thaps22354;rank=1 chr4 . exon 1534048 1536546 . - . ID=Thaps22354.1;Parent=Thaps22354;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1532215 1534008 . + . ID=Thaps40402;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BZV2];external_name=Thaps40402;logic_name=jgi_thaps3 chr4 ensembl transcript 1532215 1534008 . + . ID=Thaps40402;Parent=Thaps40402;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1532215 1532544 . + 0 ID=Thaps40402;Parent=Thaps40402;rank=1 chr4 . exon 1532215 1532544 . + . ID=Thaps40402.1;Parent=Thaps40402;constitutive=1;rank=1 chr4 . CDS 1532689 1532942 . + 0 ID=Thaps40402;Parent=Thaps40402;rank=2 chr4 . exon 1532689 1532942 . + . ID=Thaps40402.2;Parent=Thaps40402;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1533054 1533232 . + 0 ID=Thaps40402;Parent=Thaps40402;rank=3 chr4 . exon 1533054 1533232 . + . ID=Thaps40402.3;Parent=Thaps40402;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1533287 1534008 . + 0 ID=Thaps40402;Parent=Thaps40402;rank=4 chr4 . exon 1533287 1534008 . + . ID=Thaps40402.4;Parent=Thaps40402;constitutive=1;ensembl_end_phase=2;rank=4 chr4 ensembl protein_coding_gene 1526857 1528121 . + . ID=Thaps406;biotype=protein_coding;description=Glycolate oxidase [Source:UniProtKB/TrEMBL%3BAcc:B8BZV0];external_name=GOX;logic_name=jgi_thaps3 chr4 ensembl transcript 1526857 1528121 . + . ID=Thaps406;Parent=Thaps406;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1526857 1527322 . + 0 ID=Thaps406;Parent=Thaps406;rank=1 chr4 . exon 1526857 1527322 . + . ID=Thaps406.1;Parent=Thaps406;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1527391 1528121 . + 0 ID=Thaps406;Parent=Thaps406;rank=2 chr4 . exon 1527391 1528121 . + . ID=Thaps406.2;Parent=Thaps406;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . repeat_region 1542545 1542570 . ? . description=trf chr4 . repeat_region 1542545 1542570 . ? . description=dust chr4 ensembl protein_coding_gene 1538396 1542953 . - . ID=Thaps22355;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZV5];external_name=Thaps22355;logic_name=jgi_thaps3 chr4 ensembl transcript 1538396 1542953 . - . ID=Thaps22355;Parent=Thaps22355;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1538396 1539830 . - 0 ID=Thaps22355;Parent=Thaps22355;rank=3 chr4 . exon 1538396 1539830 . - . ID=Thaps22355.3;Parent=Thaps22355;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1539954 1540126 . - 0 ID=Thaps22355;Parent=Thaps22355;rank=2 chr4 . exon 1539954 1540126 . - . ID=Thaps22355.2;Parent=Thaps22355;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1540158 1542953 . - 0 ID=Thaps22355;Parent=Thaps22355;rank=1 chr4 . exon 1540158 1542953 . - . ID=Thaps22355.1;Parent=Thaps22355;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1537543 1538070 . + . ID=Thaps4640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZV4];external_name=Thaps4640;logic_name=jgi_thaps3 chr4 ensembl transcript 1537543 1538070 . + . ID=Thaps4640;Parent=Thaps4640;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1537543 1538070 . + 0 ID=Thaps4640;Parent=Thaps4640;rank=1 chr4 . exon 1537543 1538070 . + . ID=Thaps4640.1;Parent=Thaps4640;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1545657 1547933 . - . ID=Thaps22356;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZV6];external_name=Thaps22356;logic_name=jgi_thaps3 chr4 ensembl transcript 1545657 1547933 . - . ID=Thaps22356;Parent=Thaps22356;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1545657 1546288 . - 0 ID=Thaps22356;Parent=Thaps22356;rank=3 chr4 . exon 1545657 1546288 . - . ID=Thaps22356.3;Parent=Thaps22356;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1546349 1547719 . - 0 ID=Thaps22356;Parent=Thaps22356;rank=2 chr4 . exon 1546349 1547719 . - . ID=Thaps22356.2;Parent=Thaps22356;constitutive=1;rank=2 chr4 . CDS 1547816 1547933 . - 0 ID=Thaps22356;Parent=Thaps22356;rank=1 chr4 . exon 1547816 1547933 . - . ID=Thaps22356.1;Parent=Thaps22356;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1552629 1554355 . - . ID=Thaps262236;biotype=protein_coding;description=Amino acid transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BZV9];external_name=Thaps262236;logic_name=jgi_thaps3 chr4 ensembl transcript 1552629 1554355 . - . ID=Thaps262236;Parent=Thaps262236;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1552629 1553313 . - 0 ID=Thaps262236;Parent=Thaps262236;rank=2 chr4 . exon 1552629 1553313 . - . ID=Thaps262236.2;Parent=Thaps262236;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1553414 1554355 . - 0 ID=Thaps262236;Parent=Thaps262236;rank=1 chr4 . exon 1553414 1554355 . - . ID=Thaps262236.1;Parent=Thaps262236;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1550196 1550858 . + . ID=Thaps33717;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZV8];external_name=Thaps33717;logic_name=jgi_thaps3 chr4 ensembl transcript 1550196 1550858 . + . ID=Thaps33717;Parent=Thaps33717;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1550196 1550858 . + 0 ID=Thaps33717;Parent=Thaps33717;rank=1 chr4 . exon 1550196 1550858 . + . ID=Thaps33717.1;Parent=Thaps33717;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1548552 1550123 . + . ID=Thaps33724;biotype=protein_coding;description=Fumarylacetoacetase [Source:UniProtKB/TrEMBL%3BAcc:B8BZV7];external_name=Thaps33724;logic_name=jgi_thaps3 chr4 ensembl transcript 1548552 1550123 . + . ID=Thaps33724;Parent=Thaps33724;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1548552 1549617 . + 0 ID=Thaps33724;Parent=Thaps33724;rank=1 chr4 . exon 1548552 1549617 . + . ID=Thaps33724.1;Parent=Thaps33724;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1549726 1550123 . + 0 ID=Thaps33724;Parent=Thaps33724;rank=2 chr4 . exon 1549726 1550123 . + . ID=Thaps33724.2;Parent=Thaps33724;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . repeat_region 1555490 1555497 . ? . description=dust chr4 . repeat_region 1559663 1559746 . ? . description=trf chr4 . repeat_region 1560891 1560926 . ? . description=dust chr4 . repeat_region 1560903 1560926 . ? . description=trf chr4 ensembl protein_coding_gene 1557528 1560196 . + . ID=Thaps22359;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZW1];external_name=Thaps22359;logic_name=jgi_thaps3 chr4 ensembl transcript 1557528 1560196 . + . ID=Thaps22359;Parent=Thaps22359;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1557528 1557768 . + 0 ID=Thaps22359;Parent=Thaps22359;rank=1 chr4 . exon 1557528 1557768 . + . ID=Thaps22359.1;Parent=Thaps22359;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1557874 1557975 . + 0 ID=Thaps22359;Parent=Thaps22359;rank=2 chr4 . exon 1557874 1557975 . + . ID=Thaps22359.2;Parent=Thaps22359;constitutive=1;rank=2 chr4 . CDS 1558077 1559525 . + 0 ID=Thaps22359;Parent=Thaps22359;rank=3 chr4 . exon 1558077 1559525 . + . ID=Thaps22359.3;Parent=Thaps22359;constitutive=1;rank=3 chr4 . CDS 1559617 1559748 . + 0 ID=Thaps22359;Parent=Thaps22359;rank=4 chr4 . exon 1559617 1559748 . + . ID=Thaps22359.4;Parent=Thaps22359;constitutive=1;rank=4 chr4 . CDS 1559908 1559949 . + 0 ID=Thaps22359;Parent=Thaps22359;rank=5 chr4 . exon 1559908 1559949 . + . ID=Thaps22359.5;Parent=Thaps22359;constitutive=1;rank=5 chr4 . CDS 1560048 1560196 . + 0 ID=Thaps22359;Parent=Thaps22359;rank=6 chr4 . exon 1560048 1560196 . + . ID=Thaps22359.6;Parent=Thaps22359;constitutive=1;ensembl_end_phase=2;rank=6 chr4 ensembl protein_coding_gene 1562152 1564376 . - . ID=Thaps33685;biotype=protein_coding;description=Probable methylmalonyl-coa mutase [Source:UniProtKB/TrEMBL%3BAcc:B8BZW3];external_name=MCM1;logic_name=jgi_thaps3 chr4 ensembl transcript 1562152 1564376 . - . ID=Thaps33685;Parent=Thaps33685;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1562152 1563504 . - 0 ID=Thaps33685;Parent=Thaps33685;rank=2 chr4 . exon 1562152 1563504 . - . ID=Thaps33685.2;Parent=Thaps33685;constitutive=1;rank=2 chr4 . CDS 1563588 1564376 . - 0 ID=Thaps33685;Parent=Thaps33685;rank=1 chr4 . exon 1563588 1564376 . - . ID=Thaps33685.1;Parent=Thaps33685;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1555872 1556843 . + . ID=Thaps33728;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZW0];external_name=Thaps33728;logic_name=jgi_thaps3 chr4 ensembl transcript 1555872 1556843 . + . ID=Thaps33728;Parent=Thaps33728;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1555872 1555919 . + 0 ID=Thaps33728;Parent=Thaps33728;rank=1 chr4 . exon 1555872 1555919 . + . ID=Thaps33728.1;Parent=Thaps33728;constitutive=1;rank=1 chr4 . CDS 1556031 1556843 . + 0 ID=Thaps33728;Parent=Thaps33728;rank=2 chr4 . exon 1556031 1556843 . + . ID=Thaps33728.2;Parent=Thaps33728;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1560572 1561894 . + . ID=Thaps4646;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZW2];external_name=Thaps4646;logic_name=jgi_thaps3 chr4 ensembl transcript 1560572 1561894 . + . ID=Thaps4646;Parent=Thaps4646;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1560572 1561894 . + 0 ID=Thaps4646;Parent=Thaps4646;rank=1 chr4 . exon 1560572 1561894 . + . ID=Thaps4646.1;Parent=Thaps4646;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1565256 1567100 . + . ID=Thaps22362;biotype=protein_coding;description=3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BZW4];external_name=KCS1;logic_name=jgi_thaps3 chr4 ensembl transcript 1565256 1567100 . + . ID=Thaps22362;Parent=Thaps22362;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1565256 1565356 . + 0 ID=Thaps22362;Parent=Thaps22362;rank=1 chr4 . exon 1565256 1565356 . + . ID=Thaps22362.1;Parent=Thaps22362;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1565455 1566791 . + 0 ID=Thaps22362;Parent=Thaps22362;rank=2 chr4 . exon 1565455 1566791 . + . ID=Thaps22362.2;Parent=Thaps22362;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1566883 1567100 . + 0 ID=Thaps22362;Parent=Thaps22362;rank=3 chr4 . exon 1566883 1567100 . + . ID=Thaps22362.3;Parent=Thaps22362;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1568386 1570134 . + . ID=Thaps27986;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZW6];external_name=Thaps27986;logic_name=jgi_thaps3 chr4 ensembl transcript 1568386 1570134 . + . ID=Thaps27986;Parent=Thaps27986;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1568386 1568593 . + 0 ID=Thaps27986;Parent=Thaps27986;rank=1 chr4 . exon 1568386 1568593 . + . ID=Thaps27986.1;Parent=Thaps27986;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1568753 1570134 . + 0 ID=Thaps27986;Parent=Thaps27986;rank=2 chr4 . exon 1568753 1570134 . + . ID=Thaps27986.2;Parent=Thaps27986;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1570349 1570972 . - . ID=Thaps33649;biotype=protein_coding;description=20S proteasome subunit beta type 6 [Source:UniProtKB/TrEMBL%3BAcc:B8BZW7];external_name=PSB6;logic_name=jgi_thaps3 chr4 ensembl transcript 1570349 1570972 . - . ID=Thaps33649;Parent=Thaps33649;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1570349 1570972 . - 0 ID=Thaps33649;Parent=Thaps33649;rank=1 chr4 . exon 1570349 1570972 . - . ID=Thaps33649.1;Parent=Thaps33649;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1567359 1568084 . - . ID=Thaps4650;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZW5];external_name=Thaps4650;logic_name=jgi_thaps3 chr4 ensembl transcript 1567359 1568084 . - . ID=Thaps4650;Parent=Thaps4650;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1567359 1568084 . - 0 ID=Thaps4650;Parent=Thaps4650;rank=1 chr4 . exon 1567359 1568084 . - . ID=Thaps4650.1;Parent=Thaps4650;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1572610 1575228 . - . ID=Thaps4653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZW8];external_name=Thaps4653;logic_name=jgi_thaps3 chr4 ensembl transcript 1572610 1575228 . - . ID=Thaps4653;Parent=Thaps4653;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1572610 1574376 . - 0 ID=Thaps4653;Parent=Thaps4653;rank=5 chr4 . exon 1572610 1574376 . - . ID=Thaps4653.5;Parent=Thaps4653;constitutive=1;rank=5 chr4 . CDS 1574449 1574538 . - 0 ID=Thaps4653;Parent=Thaps4653;rank=4 chr4 . exon 1574449 1574538 . - . ID=Thaps4653.4;Parent=Thaps4653;constitutive=1;rank=4 chr4 . CDS 1574611 1574718 . - 0 ID=Thaps4653;Parent=Thaps4653;rank=3 chr4 . exon 1574611 1574718 . - . ID=Thaps4653.3;Parent=Thaps4653;constitutive=1;rank=3 chr4 . CDS 1574820 1574873 . - 0 ID=Thaps4653;Parent=Thaps4653;rank=2 chr4 . exon 1574820 1574873 . - . ID=Thaps4653.2;Parent=Thaps4653;constitutive=1;rank=2 chr4 . CDS 1574965 1575228 . - 0 ID=Thaps4653;Parent=Thaps4653;rank=1 chr4 . exon 1574965 1575228 . - . ID=Thaps4653.1;Parent=Thaps4653;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1583859 1585888 . - . ID=Thaps262242;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZX2];external_name=Thaps262242;logic_name=jgi_thaps3 chr4 ensembl transcript 1583859 1585888 . - . ID=Thaps262242;Parent=Thaps262242;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1583859 1584318 . - 0 ID=Thaps262242;Parent=Thaps262242;rank=5 chr4 . exon 1583859 1584318 . - . ID=Thaps262242.5;Parent=Thaps262242;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 1584394 1585033 . - 0 ID=Thaps262242;Parent=Thaps262242;rank=4 chr4 . exon 1584394 1585033 . - . ID=Thaps262242.4;Parent=Thaps262242;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1585102 1585275 . - 0 ID=Thaps262242;Parent=Thaps262242;rank=3 chr4 . CDS 1585353 1585724 . - 0 ID=Thaps262242;Parent=Thaps262242;rank=2 chr4 . CDS 1585804 1585888 . - 0 ID=Thaps262242;Parent=Thaps262242;rank=1 chr4 ensembl protein_coding_gene 1580581 1582650 . + . ID=Thaps33625;biotype=protein_coding;description=DNA topoisomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BZX1];external_name=TOP3A;logic_name=jgi_thaps3 chr4 ensembl transcript 1580581 1582650 . + . ID=Thaps33625;Parent=Thaps33625;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1580581 1581393 . + 0 ID=Thaps33625;Parent=Thaps33625;rank=1 chr4 . exon 1580581 1581393 . + . ID=Thaps33625.1;Parent=Thaps33625;constitutive=1;rank=1 chr4 . CDS 1581448 1582650 . + 0 ID=Thaps33625;Parent=Thaps33625;rank=2 chr4 . exon 1581448 1582650 . + . ID=Thaps33625.2;Parent=Thaps33625;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1577252 1577718 . + . ID=Thaps4654;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZW9];external_name=Thaps4654;logic_name=jgi_thaps3 chr4 ensembl transcript 1577252 1577718 . + . ID=Thaps4654;Parent=Thaps4654;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1577252 1577558 . + 0 ID=Thaps4654;Parent=Thaps4654;rank=1 chr4 . exon 1577252 1577558 . + . ID=Thaps4654.1;Parent=Thaps4654;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1577636 1577718 . + 0 ID=Thaps4654;Parent=Thaps4654;rank=2 chr4 . exon 1577636 1577718 . + . ID=Thaps4654.2;Parent=Thaps4654;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1578246 1580308 . - . ID=Thaps4655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZX0];external_name=Thaps4655;logic_name=jgi_thaps3 chr4 ensembl transcript 1578246 1580308 . - . ID=Thaps4655;Parent=Thaps4655;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1578246 1578562 . - 0 ID=Thaps4655;Parent=Thaps4655;rank=3 chr4 . exon 1578246 1578562 . - . ID=Thaps4655.3;Parent=Thaps4655;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1578641 1579399 . - 0 ID=Thaps4655;Parent=Thaps4655;rank=2 chr4 . exon 1578641 1579399 . - . ID=Thaps4655.2;Parent=Thaps4655;constitutive=1;rank=2 chr4 . CDS 1579480 1580308 . - 0 ID=Thaps4655;Parent=Thaps4655;rank=1 chr4 . exon 1579480 1580308 . - . ID=Thaps4655.1;Parent=Thaps4655;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 1587539 1587546 . ? . description=dust chr4 . repeat_region 1589999 1590022 . ? . description=trf chr4 . repeat_region 1590084 1590141 . ? . description=dust chr4 ensembl protein_coding_gene 1588538 1589332 . - . ID=Thaps22365;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZX3];external_name=Thaps22365;logic_name=jgi_thaps3 chr4 ensembl transcript 1588538 1589332 . - . ID=Thaps22365;Parent=Thaps22365;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1588538 1589332 . - 0 ID=Thaps22365;Parent=Thaps22365;rank=1 chr4 . exon 1588538 1589332 . - . ID=Thaps22365.1;Parent=Thaps22365;constitutive=1;rank=1 chr4 . exon 1585102 1585275 . - . ID=Thaps262242.3;Parent=Thaps262242;constitutive=1;rank=3 chr4 . exon 1585353 1585724 . - . ID=Thaps262242.2;Parent=Thaps262242;constitutive=1;rank=2 chr4 . exon 1585804 1585888 . - . ID=Thaps262242.1;Parent=Thaps262242;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1589890 1592565 . + . ID=Thaps4659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZX4];external_name=Thaps4659;logic_name=jgi_thaps3 chr4 ensembl transcript 1589890 1592565 . + . ID=Thaps4659;Parent=Thaps4659;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1589890 1592565 . + 0 ID=Thaps4659;Parent=Thaps4659;rank=1 chr4 . exon 1589890 1592565 . + . ID=Thaps4659.1;Parent=Thaps4659;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1593158 1595677 . + . ID=Thaps4660;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZX5];external_name=Thaps4660;logic_name=jgi_thaps3 chr4 ensembl transcript 1593158 1595677 . + . ID=Thaps4660;Parent=Thaps4660;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1593158 1595677 . + 0 ID=Thaps4660;Parent=Thaps4660;rank=1 chr4 . exon 1593158 1595677 . + . ID=Thaps4660.1;Parent=Thaps4660;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1600045 1601622 . - . ID=Thaps22367;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZX7];external_name=Thaps22367;logic_name=jgi_thaps3 chr4 ensembl transcript 1600045 1601622 . - . ID=Thaps22367;Parent=Thaps22367;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1600045 1601622 . - 0 ID=Thaps22367;Parent=Thaps22367;rank=1 chr4 . exon 1600045 1601622 . - . ID=Thaps22367.1;Parent=Thaps22367;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1602357 1603505 . + . ID=Thaps22368;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZX8];external_name=Thaps22368;logic_name=jgi_thaps3 chr4 ensembl transcript 1602357 1603505 . + . ID=Thaps22368;Parent=Thaps22368;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1602357 1603505 . + 0 ID=Thaps22368;Parent=Thaps22368;rank=1 chr4 . exon 1602357 1603505 . + . ID=Thaps22368.1;Parent=Thaps22368;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1595739 1599575 . - . ID=Thaps268735;biotype=protein_coding;description=Heterotrimeric G protein beta subunit 1 [Source:UniProtKB/TrEMBL%3BAcc:B8BZX6];external_name=GPB1;logic_name=jgi_thaps3 chr4 ensembl transcript 1595739 1599575 . - . ID=Thaps268735;Parent=Thaps268735;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1595739 1596284 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=10 chr4 . exon 1595739 1596284 . - . ID=Thaps268735.10;Parent=Thaps268735;constitutive=1;rank=10 chr4 . CDS 1596382 1596702 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=9 chr4 . exon 1596382 1596702 . - . ID=Thaps268735.9;Parent=Thaps268735;constitutive=1;rank=9 chr4 . CDS 1596784 1597074 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=8 chr4 . exon 1596784 1597074 . - . ID=Thaps268735.8;Parent=Thaps268735;constitutive=1;rank=8 chr4 . CDS 1597155 1597297 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=7 chr4 . exon 1597155 1597297 . - . ID=Thaps268735.7;Parent=Thaps268735;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . CDS 1597334 1597519 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=6 chr4 . exon 1597334 1597519 . - . ID=Thaps268735.6;Parent=Thaps268735;constitutive=1;rank=6 chr4 . CDS 1597571 1598141 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=5 chr4 . exon 1597571 1598141 . - . ID=Thaps268735.5;Parent=Thaps268735;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 1598232 1598281 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=4 chr4 . exon 1598232 1598281 . - . ID=Thaps268735.4;Parent=Thaps268735;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1598321 1598701 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=3 chr4 . exon 1598321 1598701 . - . ID=Thaps268735.3;Parent=Thaps268735;constitutive=1;rank=3 chr4 . CDS 1598816 1598938 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=2 chr4 . exon 1598816 1598938 . - . ID=Thaps268735.2;Parent=Thaps268735;constitutive=1;rank=2 chr4 . CDS 1599008 1599575 . - 0 ID=Thaps268735;Parent=Thaps268735;rank=1 chr4 . exon 1599008 1599575 . - . ID=Thaps268735.1;Parent=Thaps268735;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1604848 1605221 . + . ID=Thaps33709;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZX9];external_name=Thaps33709;logic_name=jgi_thaps3 chr4 ensembl transcript 1604848 1605221 . + . ID=Thaps33709;Parent=Thaps33709;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1604848 1604875 . + 0 ID=Thaps33709;Parent=Thaps33709;rank=1 chr4 . exon 1604848 1604875 . + . ID=Thaps33709.1;Parent=Thaps33709;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1605007 1605221 . + 0 ID=Thaps33709;Parent=Thaps33709;rank=2 chr4 . exon 1605007 1605221 . + . ID=Thaps33709.2;Parent=Thaps33709;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . biological_region 1608101 1608103 0.999 + . logic_name=eponine chr4 . repeat_region 1608124 1608181 . ? . description=trf chr4 . biological_region 1608171 1608174 0.999 - . logic_name=eponine chr4 . repeat_region 1609458 1609478 . ? . description=trf chr4 . repeat_region 1609458 1609478 . ? . description=dust chr4 . biological_region 1613172 1613176 0.999 - . logic_name=eponine chr4 . repeat_region 1613388 1613425 . ? . description=trf chr4 . repeat_region 1613388 1613425 . ? . description=dust chr4 ensembl protein_coding_gene 1605721 1605951 . + . ID=Thaps20266;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY0];external_name=Thaps20266;logic_name=jgi_thaps3 chr4 ensembl transcript 1605721 1605951 . + . ID=Thaps20266;Parent=Thaps20266;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1605721 1605951 . + 0 ID=Thaps20266;Parent=Thaps20266;rank=1 chr4 . exon 1605721 1605951 . + . ID=Thaps20266.1;Parent=Thaps20266;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1606199 1608231 . - . ID=Thaps22370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY1];external_name=Thaps22370;logic_name=jgi_thaps3 chr4 ensembl transcript 1606199 1608231 . - . ID=Thaps22370;Parent=Thaps22370;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1606199 1606664 . - 0 ID=Thaps22370;Parent=Thaps22370;rank=4 chr4 . exon 1606199 1606664 . - . ID=Thaps22370.4;Parent=Thaps22370;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1606744 1606763 . - 0 ID=Thaps22370;Parent=Thaps22370;rank=3 chr4 . exon 1606744 1606763 . - . ID=Thaps22370.3;Parent=Thaps22370;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1606853 1607172 . - 0 ID=Thaps22370;Parent=Thaps22370;rank=2 chr4 . exon 1606853 1607172 . - . ID=Thaps22370.2;Parent=Thaps22370;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1607259 1608231 . - 0 ID=Thaps22370;Parent=Thaps22370;rank=1 chr4 . exon 1607259 1608231 . - . ID=Thaps22370.1;Parent=Thaps22370;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1612979 1615789 . + . ID=Thaps22371;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY3];external_name=Thaps22371;logic_name=jgi_thaps3 chr4 ensembl transcript 1612979 1615789 . + . ID=Thaps22371;Parent=Thaps22371;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1612979 1614996 . + 0 ID=Thaps22371;Parent=Thaps22371;rank=1 chr4 . exon 1612979 1614996 . + . ID=Thaps22371.1;Parent=Thaps22371;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1615077 1615277 . + 0 ID=Thaps22371;Parent=Thaps22371;rank=2 chr4 . CDS 1615370 1615424 . + 0 ID=Thaps22371;Parent=Thaps22371;rank=3 chr4 . CDS 1615499 1615789 . + 0 ID=Thaps22371;Parent=Thaps22371;rank=4 chr4 ensembl protein_coding_gene 1608902 1612583 . + . ID=Thaps4666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY2];external_name=Thaps4666;logic_name=jgi_thaps3 chr4 ensembl transcript 1608902 1612583 . + . ID=Thaps4666;Parent=Thaps4666;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1608902 1609300 . + 0 ID=Thaps4666;Parent=Thaps4666;rank=1 chr4 . exon 1608902 1609300 . + . ID=Thaps4666.1;Parent=Thaps4666;constitutive=1;rank=1 chr4 . CDS 1609540 1609603 . + 0 ID=Thaps4666;Parent=Thaps4666;rank=2 chr4 . exon 1609540 1609603 . + . ID=Thaps4666.2;Parent=Thaps4666;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1609987 1610081 . + 0 ID=Thaps4666;Parent=Thaps4666;rank=3 chr4 . exon 1609987 1610081 . + . ID=Thaps4666.3;Parent=Thaps4666;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1610153 1610322 . + 0 ID=Thaps4666;Parent=Thaps4666;rank=4 chr4 . exon 1610153 1610322 . + . ID=Thaps4666.4;Parent=Thaps4666;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1610363 1612362 . + 0 ID=Thaps4666;Parent=Thaps4666;rank=5 chr4 . exon 1610363 1612362 . + . ID=Thaps4666.5;Parent=Thaps4666;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1612420 1612583 . + 0 ID=Thaps4666;Parent=Thaps4666;rank=6 chr4 . exon 1612420 1612583 . + . ID=Thaps4666.6;Parent=Thaps4666;constitutive=1;ensembl_end_phase=2;rank=6 chr4 ensembl protein_coding_gene 1617866 1618466 . - . ID=Thaps18469;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY5];external_name=Thaps18469;logic_name=jgi_thaps3 chr4 ensembl transcript 1617866 1618466 . - . ID=Thaps18469;Parent=Thaps18469;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1617866 1617950 . - 0 ID=Thaps18469;Parent=Thaps18469;rank=3 chr4 . exon 1617866 1617950 . - . ID=Thaps18469.3;Parent=Thaps18469;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1618082 1618229 . - 0 ID=Thaps18469;Parent=Thaps18469;rank=2 chr4 . exon 1618082 1618229 . - . ID=Thaps18469.2;Parent=Thaps18469;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1618328 1618466 . - 0 ID=Thaps18469;Parent=Thaps18469;rank=1 chr4 . exon 1618328 1618466 . - . ID=Thaps18469.1;Parent=Thaps18469;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 1615077 1615277 . + . ID=Thaps22371.2;Parent=Thaps22371;constitutive=1;rank=2 chr4 . exon 1615370 1615424 . + . ID=Thaps22371.3;Parent=Thaps22371;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . exon 1615499 1615789 . + . ID=Thaps22371.4;Parent=Thaps22371;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 1620212 1621306 . - . ID=Thaps22372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY6];external_name=Thaps22372;logic_name=jgi_thaps3 chr4 ensembl transcript 1620212 1621306 . - . ID=Thaps22372;Parent=Thaps22372;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1620212 1621306 . - 0 ID=Thaps22372;Parent=Thaps22372;rank=1 chr4 . exon 1620212 1621306 . - . ID=Thaps22372.1;Parent=Thaps22372;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1621910 1623940 . - . ID=Thaps268737;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY7];external_name=Thaps268737;logic_name=jgi_thaps3 chr4 ensembl transcript 1621910 1623940 . - . ID=Thaps268737;Parent=Thaps268737;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1621910 1622511 . - 0 ID=Thaps268737;Parent=Thaps268737;rank=5 chr4 . exon 1621910 1622511 . - . ID=Thaps268737.5;Parent=Thaps268737;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1622575 1622715 . - 0 ID=Thaps268737;Parent=Thaps268737;rank=4 chr4 . exon 1622575 1622715 . - . ID=Thaps268737.4;Parent=Thaps268737;constitutive=1;rank=4 chr4 . CDS 1623125 1623505 . - 0 ID=Thaps268737;Parent=Thaps268737;rank=3 chr4 . exon 1623125 1623505 . - . ID=Thaps268737.3;Parent=Thaps268737;constitutive=1;rank=3 chr4 . CDS 1623539 1623733 . - 0 ID=Thaps268737;Parent=Thaps268737;rank=2 chr4 . exon 1623539 1623733 . - . ID=Thaps268737.2;Parent=Thaps268737;constitutive=1;rank=2 chr4 . CDS 1623889 1623940 . - 0 ID=Thaps268737;Parent=Thaps268737;rank=1 chr4 . exon 1623889 1623940 . - . ID=Thaps268737.1;Parent=Thaps268737;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1616008 1617039 . - . ID=Thaps4668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY4];external_name=Thaps4668;logic_name=jgi_thaps3 chr4 ensembl transcript 1616008 1617039 . - . ID=Thaps4668;Parent=Thaps4668;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1616008 1617039 . - 0 ID=Thaps4668;Parent=Thaps4668;rank=1 chr4 . exon 1616008 1617039 . - . ID=Thaps4668.1;Parent=Thaps4668;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1624396 1627257 . + . ID=Thaps4672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY8];external_name=Thaps4672;logic_name=jgi_thaps3 chr4 ensembl transcript 1624396 1627257 . + . ID=Thaps4672;Parent=Thaps4672;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1624396 1627257 . + 0 ID=Thaps4672;Parent=Thaps4672;rank=1 chr4 . exon 1624396 1627257 . + . ID=Thaps4672.1;Parent=Thaps4672;constitutive=1;rank=1 chr4 . repeat_region 1629590 1629597 . ? . description=dust chr4 . repeat_region 1630543 1630579 . ? . description=trf chr4 . repeat_region 1630552 1630579 . ? . description=dust chr4 ensembl protein_coding_gene 1632472 1633134 . - . ID=Thaps17735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ2];external_name=Thaps17735;logic_name=jgi_thaps3 chr4 ensembl transcript 1632472 1633134 . - . ID=Thaps17735;Parent=Thaps17735;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1632472 1633134 . - 0 ID=Thaps17735;Parent=Thaps17735;rank=1 chr4 . exon 1632472 1633134 . - . ID=Thaps17735.1;Parent=Thaps17735;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1627467 1628245 . - . ID=Thaps22374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZY9];external_name=Thaps22374;logic_name=jgi_thaps3 chr4 ensembl transcript 1627467 1628245 . - . ID=Thaps22374;Parent=Thaps22374;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1627467 1627559 . - 0 ID=Thaps22374;Parent=Thaps22374;rank=2 chr4 . exon 1627467 1627559 . - . ID=Thaps22374.2;Parent=Thaps22374;constitutive=1;rank=2 chr4 . CDS 1627658 1628245 . - 0 ID=Thaps22374;Parent=Thaps22374;rank=1 chr4 . exon 1627658 1628245 . - . ID=Thaps22374.1;Parent=Thaps22374;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1630590 1632023 . + . ID=Thaps22375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ1];external_name=Thaps22375;logic_name=jgi_thaps3 chr4 ensembl transcript 1630590 1632023 . + . ID=Thaps22375;Parent=Thaps22375;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1630590 1631183 . + 0 ID=Thaps22375;Parent=Thaps22375;rank=1 chr4 . exon 1630590 1631183 . + . ID=Thaps22375.1;Parent=Thaps22375;constitutive=1;rank=1 chr4 . CDS 1631217 1631351 . + 0 ID=Thaps22375;Parent=Thaps22375;rank=2 chr4 . exon 1631217 1631351 . + . ID=Thaps22375.2;Parent=Thaps22375;constitutive=1;rank=2 chr4 . CDS 1631451 1632023 . + 0 ID=Thaps22375;Parent=Thaps22375;rank=3 chr4 . exon 1631451 1632023 . + . ID=Thaps22375.3;Parent=Thaps22375;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 1628539 1629921 . - . ID=Thaps4674;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ0];external_name=Thaps4674;logic_name=jgi_thaps3 chr4 ensembl transcript 1628539 1629921 . - . ID=Thaps4674;Parent=Thaps4674;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1628539 1629921 . - 0 ID=Thaps4674;Parent=Thaps4674;rank=1 chr4 . exon 1628539 1629921 . - . ID=Thaps4674.1;Parent=Thaps4674;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1633209 1633541 . + . ID=Thaps4676;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ3];external_name=Thaps4676;logic_name=jgi_thaps3 chr4 ensembl transcript 1633209 1633541 . + . ID=Thaps4676;Parent=Thaps4676;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1633209 1633541 . + 0 ID=Thaps4676;Parent=Thaps4676;rank=1 chr4 . exon 1633209 1633541 . + . ID=Thaps4676.1;Parent=Thaps4676;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1633795 1634927 . - . ID=Thaps4677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ4];external_name=Thaps4677;logic_name=jgi_thaps3 chr4 ensembl transcript 1633795 1634927 . - . ID=Thaps4677;Parent=Thaps4677;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1633795 1634670 . - 0 ID=Thaps4677;Parent=Thaps4677;rank=3 chr4 . exon 1633795 1634670 . - . ID=Thaps4677.3;Parent=Thaps4677;constitutive=1;rank=3 chr4 . CDS 1634712 1634731 . - 0 ID=Thaps4677;Parent=Thaps4677;rank=2 chr4 . exon 1634712 1634731 . - . ID=Thaps4677.2;Parent=Thaps4677;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1634759 1634927 . - 0 ID=Thaps4677;Parent=Thaps4677;rank=1 chr4 . exon 1634759 1634927 . - . ID=Thaps4677.1;Parent=Thaps4677;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1640631 1641059 . - . ID=Thaps22378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ8];external_name=Thaps22378;logic_name=jgi_thaps3 chr4 ensembl transcript 1640631 1641059 . - . ID=Thaps22378;Parent=Thaps22378;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1640631 1641059 . - 0 ID=Thaps22378;Parent=Thaps22378;rank=1 chr4 . exon 1640631 1641059 . - . ID=Thaps22378.1;Parent=Thaps22378;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1641809 1644163 . + . ID=Thaps22379;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ9];external_name=Thaps22379;logic_name=jgi_thaps3 chr4 ensembl transcript 1641809 1644163 . + . ID=Thaps22379;Parent=Thaps22379;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1641809 1644163 . + 0 ID=Thaps22379;Parent=Thaps22379;rank=1 chr4 . exon 1641809 1644163 . + . ID=Thaps22379.1;Parent=Thaps22379;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1636585 1638268 . + . ID=Thaps262247;biotype=protein_coding;description=Chitinase [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ5];external_name=CHT2;logic_name=jgi_thaps3 chr4 ensembl transcript 1636585 1638268 . + . ID=Thaps262247;Parent=Thaps262247;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1636585 1636686 . + 0 ID=Thaps262247;Parent=Thaps262247;rank=1 chr4 . exon 1636585 1636686 . + . ID=Thaps262247.1;Parent=Thaps262247;constitutive=1;rank=1 chr4 . CDS 1636769 1637483 . + 0 ID=Thaps262247;Parent=Thaps262247;rank=2 chr4 . exon 1636769 1637483 . + . ID=Thaps262247.2;Parent=Thaps262247;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1637610 1638268 . + 0 ID=Thaps262247;Parent=Thaps262247;rank=3 chr4 . exon 1637610 1638268 . + . ID=Thaps262247.3;Parent=Thaps262247;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1638379 1639113 . - . ID=Thaps4679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ6];external_name=Thaps4679;logic_name=jgi_thaps3 chr4 ensembl transcript 1638379 1639113 . - . ID=Thaps4679;Parent=Thaps4679;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1638379 1638770 . - 0 ID=Thaps4679;Parent=Thaps4679;rank=2 chr4 . exon 1638379 1638770 . - . ID=Thaps4679.2;Parent=Thaps4679;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1638948 1639113 . - 0 ID=Thaps4679;Parent=Thaps4679;rank=1 chr4 . exon 1638948 1639113 . - . ID=Thaps4679.1;Parent=Thaps4679;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1639837 1640226 . + . ID=Thaps4680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BZZ7];external_name=Thaps4680;logic_name=jgi_thaps3 chr4 ensembl transcript 1639837 1640226 . + . ID=Thaps4680;Parent=Thaps4680;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1639837 1640226 . + 0 ID=Thaps4680;Parent=Thaps4680;rank=1 chr4 . exon 1639837 1640226 . + . ID=Thaps4680.1;Parent=Thaps4680;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1645871 1646092 . + . ID=Thaps262248;biotype=protein_coding;description=Proline-rich protein [Source:UniProtKB/TrEMBL%3BAcc:B8C000];external_name=Thaps262248;logic_name=jgi_thaps3 chr4 ensembl transcript 1645871 1646092 . + . ID=Thaps262248;Parent=Thaps262248;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1645871 1646092 . + 0 ID=Thaps262248;Parent=Thaps262248;rank=1 chr4 . exon 1645871 1646092 . + . ID=Thaps262248.1;Parent=Thaps262248;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1646471 1647293 . + . ID=Thaps262249;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C001];external_name=Thaps262249;logic_name=jgi_thaps3 chr4 ensembl transcript 1646471 1647293 . + . ID=Thaps262249;Parent=Thaps262249;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1646471 1646621 . + 0 ID=Thaps262249;Parent=Thaps262249;rank=1 chr4 . exon 1646471 1646621 . + . ID=Thaps262249.1;Parent=Thaps262249;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1646709 1646783 . + 0 ID=Thaps262249;Parent=Thaps262249;rank=2 chr4 . exon 1646709 1646783 . + . ID=Thaps262249.2;Parent=Thaps262249;constitutive=1;rank=2 chr4 . CDS 1646861 1647096 . + 0 ID=Thaps262249;Parent=Thaps262249;rank=3 chr4 . exon 1646861 1647096 . + . ID=Thaps262249.3;Parent=Thaps262249;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1647176 1647293 . + 0 ID=Thaps262249;Parent=Thaps262249;rank=4 chr4 . exon 1647176 1647293 . + . ID=Thaps262249.4;Parent=Thaps262249;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 1648974 1649837 . - . ID=Thaps262250;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C002];external_name=Thaps262250;logic_name=jgi_thaps3 chr4 ensembl transcript 1648974 1649837 . - . ID=Thaps262250;Parent=Thaps262250;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1648974 1649124 . - 0 ID=Thaps262250;Parent=Thaps262250;rank=2 chr4 . exon 1648974 1649124 . - . ID=Thaps262250.2;Parent=Thaps262250;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1649149 1649837 . - 0 ID=Thaps262250;Parent=Thaps262250;rank=1 chr4 . exon 1649149 1649837 . - . ID=Thaps262250.1;Parent=Thaps262250;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1652510 1653644 . - . ID=Thaps262251;biotype=protein_coding;description=Soluble adenylyl cyclase [Source:UniProtKB/TrEMBL%3BAcc:B8C003];external_name=Thaps262251;logic_name=jgi_thaps3 chr4 ensembl transcript 1652510 1653644 . - . ID=Thaps262251;Parent=Thaps262251;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1652510 1653397 . - 0 ID=Thaps262251;Parent=Thaps262251;rank=2 chr4 . exon 1652510 1653397 . - . ID=Thaps262251.2;Parent=Thaps262251;constitutive=1;rank=2 chr4 . CDS 1653458 1653644 . - 0 ID=Thaps262251;Parent=Thaps262251;rank=1 chr4 . exon 1653458 1653644 . - . ID=Thaps262251.1;Parent=Thaps262251;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 1660027 1660034 . ? . description=dust chr4 ensembl protein_coding_gene 1660479 1663868 . - . ID=Thaps22382;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C006];external_name=Thaps22382;logic_name=jgi_thaps3 chr4 ensembl transcript 1660479 1663868 . - . ID=Thaps22382;Parent=Thaps22382;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1660479 1662743 . - 0 ID=Thaps22382;Parent=Thaps22382;rank=2 chr4 . exon 1660479 1662743 . - . ID=Thaps22382.2;Parent=Thaps22382;constitutive=1;rank=2 chr4 . CDS 1662849 1663868 . - 0 ID=Thaps22382;Parent=Thaps22382;rank=1 chr4 . exon 1662849 1663868 . - . ID=Thaps22382.1;Parent=Thaps22382;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1657830 1658680 . + . ID=Thaps262253;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C005];external_name=Thaps262253;logic_name=jgi_thaps3 chr4 ensembl transcript 1657830 1658680 . + . ID=Thaps262253;Parent=Thaps262253;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1657830 1658680 . + 0 ID=Thaps262253;Parent=Thaps262253;rank=1 chr4 . exon 1657830 1658680 . + . ID=Thaps262253.1;Parent=Thaps262253;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1655439 1657352 . + . ID=Thaps268740;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C004];external_name=Thaps268740;logic_name=jgi_thaps3 chr4 ensembl transcript 1655439 1657352 . + . ID=Thaps268740;Parent=Thaps268740;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1655439 1656203 . + 0 ID=Thaps268740;Parent=Thaps268740;rank=1 chr4 . exon 1655439 1656203 . + . ID=Thaps268740.1;Parent=Thaps268740;constitutive=1;rank=1 chr4 . CDS 1656411 1656698 . + 0 ID=Thaps268740;Parent=Thaps268740;rank=2 chr4 . exon 1656411 1656698 . + . ID=Thaps268740.2;Parent=Thaps268740;constitutive=1;rank=2 chr4 . CDS 1656975 1657352 . + 0 ID=Thaps268740;Parent=Thaps268740;rank=3 chr4 . exon 1656975 1657352 . + . ID=Thaps268740.3;Parent=Thaps268740;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 1664271 1668895 . + . ID=Thaps4688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C007];external_name=Thaps4688;logic_name=jgi_thaps3 chr4 ensembl transcript 1664271 1668895 . + . ID=Thaps4688;Parent=Thaps4688;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1664271 1664689 . + 0 ID=Thaps4688;Parent=Thaps4688;rank=1 chr4 . exon 1664271 1664689 . + . ID=Thaps4688.1;Parent=Thaps4688;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1664730 1666607 . + 0 ID=Thaps4688;Parent=Thaps4688;rank=2 chr4 . exon 1664730 1666607 . + . ID=Thaps4688.2;Parent=Thaps4688;constitutive=1;rank=2 chr4 . CDS 1666692 1667614 . + 0 ID=Thaps4688;Parent=Thaps4688;rank=3 chr4 . CDS 1667699 1668127 . + 0 ID=Thaps4688;Parent=Thaps4688;rank=4 chr4 . CDS 1668208 1668383 . + 0 ID=Thaps4688;Parent=Thaps4688;rank=5 chr4 . CDS 1668461 1668895 . + 0 ID=Thaps4688;Parent=Thaps4688;rank=6 chr4 . repeat_region 1674637 1674680 . ? . description=trf chr4 ensembl protein_coding_gene 1671989 1672627 . + . ID=Thaps22383;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C009];external_name=Thaps22383;logic_name=jgi_thaps3 chr4 ensembl transcript 1671989 1672627 . + . ID=Thaps22383;Parent=Thaps22383;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1671989 1672627 . + 0 ID=Thaps22383;Parent=Thaps22383;rank=1 chr4 . exon 1671989 1672627 . + . ID=Thaps22383.1;Parent=Thaps22383;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1669035 1671003 . - . ID=Thaps262254;biotype=protein_coding;description=ABC transporter protein family [Source:UniProtKB/TrEMBL%3BAcc:B8C008];external_name=Thaps262254;logic_name=jgi_thaps3 chr4 ensembl transcript 1669035 1671003 . - . ID=Thaps262254;Parent=Thaps262254;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1669035 1669242 . - 0 ID=Thaps262254;Parent=Thaps262254;rank=5 chr4 . exon 1669035 1669242 . - . ID=Thaps262254.5;Parent=Thaps262254;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 1669330 1669872 . - 0 ID=Thaps262254;Parent=Thaps262254;rank=4 chr4 . exon 1669330 1669872 . - . ID=Thaps262254.4;Parent=Thaps262254;constitutive=1;rank=4 chr4 . CDS 1669903 1670287 . - 0 ID=Thaps262254;Parent=Thaps262254;rank=3 chr4 . exon 1669903 1670287 . - . ID=Thaps262254.3;Parent=Thaps262254;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1670373 1670601 . - 0 ID=Thaps262254;Parent=Thaps262254;rank=2 chr4 . exon 1670373 1670601 . - . ID=Thaps262254.2;Parent=Thaps262254;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1670770 1671003 . - 0 ID=Thaps262254;Parent=Thaps262254;rank=1 chr4 . exon 1670770 1671003 . - . ID=Thaps262254.1;Parent=Thaps262254;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1674765 1676935 . - . ID=Thaps27997;biotype=protein_coding;description=Probable dihydroxyacid dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8C011];external_name=DAD1;logic_name=jgi_thaps3 chr4 ensembl transcript 1674765 1676935 . - . ID=Thaps27997;Parent=Thaps27997;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1674765 1675328 . - 0 ID=Thaps27997;Parent=Thaps27997;rank=4 chr4 . exon 1674765 1675328 . - . ID=Thaps27997.4;Parent=Thaps27997;constitutive=1;rank=4 chr4 . CDS 1675415 1675732 . - 0 ID=Thaps27997;Parent=Thaps27997;rank=3 chr4 . CDS 1675816 1676707 . - 0 ID=Thaps27997;Parent=Thaps27997;rank=2 chr4 . CDS 1676787 1676935 . - 0 ID=Thaps27997;Parent=Thaps27997;rank=1 chr4 . exon 1666692 1667614 . + . ID=Thaps4688.3;Parent=Thaps4688;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . exon 1667699 1668127 . + . ID=Thaps4688.4;Parent=Thaps4688;constitutive=1;rank=4 chr4 . exon 1668208 1668383 . + . ID=Thaps4688.5;Parent=Thaps4688;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . exon 1668461 1668895 . + . ID=Thaps4688.6;Parent=Thaps4688;constitutive=1;rank=6 chr4 ensembl protein_coding_gene 1673133 1674608 . + . ID=Thaps4691;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C010];external_name=Thaps4691;logic_name=jgi_thaps3 chr4 ensembl transcript 1673133 1674608 . + . ID=Thaps4691;Parent=Thaps4691;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1673133 1674608 . + 0 ID=Thaps4691;Parent=Thaps4691;rank=1 chr4 . exon 1673133 1674608 . + . ID=Thaps4691.1;Parent=Thaps4691;constitutive=1;rank=1 chr4 . repeat_region 1684753 1684854 . - . description=Harbinger1_TP chr4 ensembl protein_coding_gene 1677355 1679418 . + . ID=Thaps22385;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C012];external_name=Thaps22385;logic_name=jgi_thaps3 chr4 ensembl transcript 1677355 1679418 . + . ID=Thaps22385;Parent=Thaps22385;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1677355 1679418 . + 0 ID=Thaps22385;Parent=Thaps22385;rank=1 chr4 . exon 1677355 1679418 . + . ID=Thaps22385.1;Parent=Thaps22385;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1682419 1682843 . + . ID=Thaps262257;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C015];external_name=Thaps262257;logic_name=jgi_thaps3 chr4 ensembl transcript 1682419 1682843 . + . ID=Thaps262257;Parent=Thaps262257;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1682419 1682682 . + 0 ID=Thaps262257;Parent=Thaps262257;rank=1 chr4 . exon 1682419 1682682 . + . ID=Thaps262257.1;Parent=Thaps262257;constitutive=1;rank=1 chr4 . CDS 1682789 1682843 . + 0 ID=Thaps262257;Parent=Thaps262257;rank=2 chr4 . exon 1682789 1682843 . + . ID=Thaps262257.2;Parent=Thaps262257;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 1675415 1675732 . - . ID=Thaps27997.3;Parent=Thaps27997;constitutive=1;rank=3 chr4 . exon 1675816 1676707 . - . ID=Thaps27997.2;Parent=Thaps27997;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 1676787 1676935 . - . ID=Thaps27997.1;Parent=Thaps27997;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1679905 1680910 . + . ID=Thaps411;biotype=protein_coding;description=Precursor of synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8C013];external_name=SCS2;logic_name=jgi_thaps3 chr4 ensembl transcript 1679905 1680910 . + . ID=Thaps411;Parent=Thaps411;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1679905 1679974 . + 0 ID=Thaps411;Parent=Thaps411;rank=1 chr4 . exon 1679905 1679974 . + . ID=Thaps411.1;Parent=Thaps411;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1680081 1680910 . + 0 ID=Thaps411;Parent=Thaps411;rank=2 chr4 . exon 1680081 1680910 . + . ID=Thaps411.2;Parent=Thaps411;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1681134 1682070 . - . ID=Thaps4696;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C014];external_name=Thaps4696;logic_name=jgi_thaps3 chr4 ensembl transcript 1681134 1682070 . - . ID=Thaps4696;Parent=Thaps4696;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1681134 1681573 . - 0 ID=Thaps4696;Parent=Thaps4696;rank=2 chr4 . exon 1681134 1681573 . - . ID=Thaps4696.2;Parent=Thaps4696;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1681776 1682070 . - 0 ID=Thaps4696;Parent=Thaps4696;rank=1 chr4 . exon 1681776 1682070 . - . ID=Thaps4696.1;Parent=Thaps4696;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 1686802 1686849 . ? . description=trf chr4 ensembl protein_coding_gene 1694180 1694800 . + . ID=Thaps22388;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C020];external_name=Thaps22388;logic_name=jgi_thaps3 chr4 ensembl transcript 1694180 1694800 . + . ID=Thaps22388;Parent=Thaps22388;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1694180 1694800 . + 0 ID=Thaps22388;Parent=Thaps22388;rank=1 chr4 . exon 1694180 1694800 . + . ID=Thaps22388.1;Parent=Thaps22388;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1686963 1688661 . + . ID=Thaps262258;biotype=protein_coding;description=Transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C016];external_name=Thaps262258;logic_name=jgi_thaps3 chr4 ensembl transcript 1686963 1688661 . + . ID=Thaps262258;Parent=Thaps262258;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1686963 1687322 . + 0 ID=Thaps262258;Parent=Thaps262258;rank=1 chr4 . exon 1686963 1687322 . + . ID=Thaps262258.1;Parent=Thaps262258;constitutive=1;rank=1 chr4 . CDS 1687395 1687509 . + 0 ID=Thaps262258;Parent=Thaps262258;rank=2 chr4 . exon 1687395 1687509 . + . ID=Thaps262258.2;Parent=Thaps262258;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1687580 1687890 . + 0 ID=Thaps262258;Parent=Thaps262258;rank=3 chr4 . exon 1687580 1687890 . + . ID=Thaps262258.3;Parent=Thaps262258;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1687969 1687985 . + 0 ID=Thaps262258;Parent=Thaps262258;rank=4 chr4 . exon 1687969 1687985 . + . ID=Thaps262258.4;Parent=Thaps262258;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1688066 1688085 . + 0 ID=Thaps262258;Parent=Thaps262258;rank=5 chr4 . exon 1688066 1688085 . + . ID=Thaps262258.5;Parent=Thaps262258;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 1688168 1688661 . + 0 ID=Thaps262258;Parent=Thaps262258;rank=6 chr4 . exon 1688168 1688661 . + . ID=Thaps262258.6;Parent=Thaps262258;constitutive=1;ensembl_end_phase=2;rank=6 chr4 ensembl protein_coding_gene 1688811 1690523 . - . ID=Thaps412;biotype=protein_coding;description=Alanine aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C017];external_name=ALAT_1;logic_name=jgi_thaps3 chr4 ensembl transcript 1688811 1690523 . - . ID=Thaps412;Parent=Thaps412;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1688811 1688948 . - 0 ID=Thaps412;Parent=Thaps412;rank=5 chr4 . exon 1688811 1688948 . - . ID=Thaps412.5;Parent=Thaps412;constitutive=1;rank=5 chr4 . CDS 1689053 1689672 . - 0 ID=Thaps412;Parent=Thaps412;rank=4 chr4 . exon 1689053 1689672 . - . ID=Thaps412.4;Parent=Thaps412;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1689759 1689824 . - 0 ID=Thaps412;Parent=Thaps412;rank=3 chr4 . exon 1689759 1689824 . - . ID=Thaps412.3;Parent=Thaps412;constitutive=1;rank=3 chr4 . CDS 1689934 1690398 . - 0 ID=Thaps412;Parent=Thaps412;rank=2 chr4 . exon 1689934 1690398 . - . ID=Thaps412.2;Parent=Thaps412;constitutive=1;rank=2 chr4 . CDS 1690478 1690523 . - 0 ID=Thaps412;Parent=Thaps412;rank=1 chr4 . exon 1690478 1690523 . - . ID=Thaps412.1;Parent=Thaps412;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1691454 1692446 . + . ID=Thaps4700;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C018];external_name=Thaps4700;logic_name=jgi_thaps3 chr4 ensembl transcript 1691454 1692446 . + . ID=Thaps4700;Parent=Thaps4700;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1691454 1692446 . + 0 ID=Thaps4700;Parent=Thaps4700;rank=1 chr4 . exon 1691454 1692446 . + . ID=Thaps4700.1;Parent=Thaps4700;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1692765 1693673 . - . ID=Thaps4701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C019];external_name=Thaps4701;logic_name=jgi_thaps3 chr4 ensembl transcript 1692765 1693673 . - . ID=Thaps4701;Parent=Thaps4701;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1692765 1693673 . - 0 ID=Thaps4701;Parent=Thaps4701;rank=1 chr4 . exon 1692765 1693673 . - . ID=Thaps4701.1;Parent=Thaps4701;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1695379 1696511 . + . ID=Thaps22389;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C021];external_name=Thaps22389;logic_name=jgi_thaps3 chr4 ensembl transcript 1695379 1696511 . + . ID=Thaps22389;Parent=Thaps22389;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1695379 1695624 . + 0 ID=Thaps22389;Parent=Thaps22389;rank=1 chr4 . exon 1695379 1695624 . + . ID=Thaps22389.1;Parent=Thaps22389;constitutive=1;rank=1 chr4 . CDS 1695738 1696511 . + 0 ID=Thaps22389;Parent=Thaps22389;rank=2 chr4 . exon 1695738 1696511 . + . ID=Thaps22389.2;Parent=Thaps22389;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1701649 1703973 . - . ID=Thaps262261;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C024];external_name=Thaps262261;logic_name=jgi_thaps3 chr4 ensembl transcript 1701649 1703973 . - . ID=Thaps262261;Parent=Thaps262261;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1701649 1701933 . - 0 ID=Thaps262261;Parent=Thaps262261;rank=5 chr4 . exon 1701649 1701933 . - . ID=Thaps262261.5;Parent=Thaps262261;constitutive=1;rank=5 chr4 . CDS 1702107 1702464 . - 0 ID=Thaps262261;Parent=Thaps262261;rank=4 chr4 . exon 1702107 1702464 . - . ID=Thaps262261.4;Parent=Thaps262261;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1702543 1702629 . - 0 ID=Thaps262261;Parent=Thaps262261;rank=3 chr4 . exon 1702543 1702629 . - . ID=Thaps262261.3;Parent=Thaps262261;constitutive=1;rank=3 chr4 . CDS 1702729 1702873 . - 0 ID=Thaps262261;Parent=Thaps262261;rank=2 chr4 . exon 1702729 1702873 . - . ID=Thaps262261.2;Parent=Thaps262261;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1703290 1703973 . - 0 ID=Thaps262261;Parent=Thaps262261;rank=1 chr4 . exon 1703290 1703973 . - . ID=Thaps262261.1;Parent=Thaps262261;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1696615 1699362 . - . ID=Thaps4704;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C022];external_name=Thaps4704;logic_name=jgi_thaps3 chr4 ensembl transcript 1696615 1699362 . - . ID=Thaps4704;Parent=Thaps4704;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1696615 1698663 . - 0 ID=Thaps4704;Parent=Thaps4704;rank=3 chr4 . exon 1696615 1698663 . - . ID=Thaps4704.3;Parent=Thaps4704;constitutive=1;rank=3 chr4 . CDS 1698691 1698773 . - 0 ID=Thaps4704;Parent=Thaps4704;rank=2 chr4 . exon 1698691 1698773 . - . ID=Thaps4704.2;Parent=Thaps4704;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1699161 1699362 . - 0 ID=Thaps4704;Parent=Thaps4704;rank=1 chr4 . exon 1699161 1699362 . - . ID=Thaps4704.1;Parent=Thaps4704;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1700283 1701143 . - . ID=Thaps4705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C023];external_name=Thaps4705;logic_name=jgi_thaps3 chr4 ensembl transcript 1700283 1701143 . - . ID=Thaps4705;Parent=Thaps4705;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1700283 1701143 . - 0 ID=Thaps4705;Parent=Thaps4705;rank=1 chr4 . exon 1700283 1701143 . - . ID=Thaps4705.1;Parent=Thaps4705;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1704754 1706582 . + . ID=Thaps22391;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C025];external_name=Thaps22391;logic_name=jgi_thaps3 chr4 ensembl transcript 1704754 1706582 . + . ID=Thaps22391;Parent=Thaps22391;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1704754 1705440 . + 0 ID=Thaps22391;Parent=Thaps22391;rank=1 chr4 . exon 1704754 1705440 . + . ID=Thaps22391.1;Parent=Thaps22391;constitutive=1;rank=1 chr4 . CDS 1705551 1705824 . + 0 ID=Thaps22391;Parent=Thaps22391;rank=2 chr4 . exon 1705551 1705824 . + . ID=Thaps22391.2;Parent=Thaps22391;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1705915 1706582 . + 0 ID=Thaps22391;Parent=Thaps22391;rank=3 chr4 . exon 1705915 1706582 . + . ID=Thaps22391.3;Parent=Thaps22391;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1709480 1711174 . + . ID=Thaps4708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C026];external_name=Thaps4708;logic_name=jgi_thaps3 chr4 ensembl transcript 1709480 1711174 . + . ID=Thaps4708;Parent=Thaps4708;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1709480 1711174 . + 0 ID=Thaps4708;Parent=Thaps4708;rank=1 chr4 . exon 1709480 1711174 . + . ID=Thaps4708.1;Parent=Thaps4708;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1712789 1714993 . - . ID=Thaps4709;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C027];external_name=Thaps4709;logic_name=jgi_thaps3 chr4 ensembl transcript 1712789 1714993 . - . ID=Thaps4709;Parent=Thaps4709;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1712789 1714993 . - 0 ID=Thaps4709;Parent=Thaps4709;rank=1 chr4 . exon 1712789 1714993 . - . ID=Thaps4709.1;Parent=Thaps4709;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1718620 1720029 . - . ID=Thaps268744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C029];external_name=Thaps268744;logic_name=jgi_thaps3 chr4 ensembl transcript 1718620 1720029 . - . ID=Thaps268744;Parent=Thaps268744;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1718620 1719192 . - 0 ID=Thaps268744;Parent=Thaps268744;rank=4 chr4 . exon 1718620 1719192 . - . ID=Thaps268744.4;Parent=Thaps268744;constitutive=1;rank=4 chr4 . CDS 1719226 1719273 . - 0 ID=Thaps268744;Parent=Thaps268744;rank=3 chr4 . exon 1719226 1719273 . - . ID=Thaps268744.3;Parent=Thaps268744;constitutive=1;rank=3 chr4 . CDS 1719343 1719642 . - 0 ID=Thaps268744;Parent=Thaps268744;rank=2 chr4 . exon 1719343 1719642 . - . ID=Thaps268744.2;Parent=Thaps268744;constitutive=1;rank=2 chr4 . CDS 1719718 1720029 . - 0 ID=Thaps268744;Parent=Thaps268744;rank=1 chr4 . exon 1719718 1720029 . - . ID=Thaps268744.1;Parent=Thaps268744;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1723292 1726360 . - . ID=Thaps28004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C032];external_name=Thaps28004;logic_name=jgi_thaps3 chr4 ensembl transcript 1723292 1726360 . - . ID=Thaps28004;Parent=Thaps28004;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1723292 1724980 . - 0 ID=Thaps28004;Parent=Thaps28004;rank=5 chr4 . exon 1723292 1724980 . - . ID=Thaps28004.5;Parent=Thaps28004;constitutive=1;rank=5 chr4 . CDS 1725092 1725298 . - 0 ID=Thaps28004;Parent=Thaps28004;rank=4 chr4 . CDS 1725473 1725718 . - 0 ID=Thaps28004;Parent=Thaps28004;rank=3 chr4 . CDS 1725923 1726187 . - 0 ID=Thaps28004;Parent=Thaps28004;rank=2 chr4 . CDS 1726269 1726360 . - 0 ID=Thaps28004;Parent=Thaps28004;rank=1 chr4 ensembl protein_coding_gene 1715742 1718553 . + . ID=Thaps4710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C028];external_name=Thaps4710;logic_name=jgi_thaps3 chr4 ensembl transcript 1715742 1718553 . + . ID=Thaps4710;Parent=Thaps4710;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1715742 1717785 . + 0 ID=Thaps4710;Parent=Thaps4710;rank=1 chr4 . exon 1715742 1717785 . + . ID=Thaps4710.1;Parent=Thaps4710;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1717874 1718553 . + 0 ID=Thaps4710;Parent=Thaps4710;rank=2 chr4 . exon 1717874 1718553 . + . ID=Thaps4710.2;Parent=Thaps4710;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1720552 1721400 . - . ID=Thaps4712;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C030];external_name=Thaps4712;logic_name=jgi_thaps3 chr4 ensembl transcript 1720552 1721400 . - . ID=Thaps4712;Parent=Thaps4712;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1720552 1721151 . - 0 ID=Thaps4712;Parent=Thaps4712;rank=2 chr4 . exon 1720552 1721151 . - . ID=Thaps4712.2;Parent=Thaps4712;constitutive=1;rank=2 chr4 . CDS 1721236 1721400 . - 0 ID=Thaps4712;Parent=Thaps4712;rank=1 chr4 . exon 1721236 1721400 . - . ID=Thaps4712.1;Parent=Thaps4712;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1721719 1723221 . + . ID=Thaps4713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C031];external_name=Thaps4713;logic_name=jgi_thaps3 chr4 ensembl transcript 1721719 1723221 . + . ID=Thaps4713;Parent=Thaps4713;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1721719 1722250 . + 0 ID=Thaps4713;Parent=Thaps4713;rank=1 chr4 . exon 1721719 1722250 . + . ID=Thaps4713.1;Parent=Thaps4713;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1722341 1723221 . + 0 ID=Thaps4713;Parent=Thaps4713;rank=2 chr4 . exon 1722341 1723221 . + . ID=Thaps4713.2;Parent=Thaps4713;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . repeat_region 1732549 1732578 . ? . description=trf chr4 . repeat_region 1733402 1733425 . ? . description=trf chr4 ensembl protein_coding_gene 1727233 1729260 . + . ID=Thaps22394;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C033];external_name=Thaps22394;logic_name=jgi_thaps3 chr4 ensembl transcript 1727233 1729260 . + . ID=Thaps22394;Parent=Thaps22394;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1727233 1729260 . + 0 ID=Thaps22394;Parent=Thaps22394;rank=1 chr4 . exon 1727233 1729260 . + . ID=Thaps22394.1;Parent=Thaps22394;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1729673 1732183 . - . ID=Thaps22395;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C034];external_name=Thaps22395;logic_name=jgi_thaps3 chr4 ensembl transcript 1729673 1732183 . - . ID=Thaps22395;Parent=Thaps22395;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1729673 1732183 . - 0 ID=Thaps22395;Parent=Thaps22395;rank=1 chr4 . exon 1729673 1732183 . - . ID=Thaps22395.1;Parent=Thaps22395;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1733691 1734256 . + . ID=Thaps22396;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C035];external_name=Thaps22396;logic_name=jgi_thaps3 chr4 ensembl transcript 1733691 1734256 . + . ID=Thaps22396;Parent=Thaps22396;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1733691 1733787 . + 0 ID=Thaps22396;Parent=Thaps22396;rank=1 chr4 . exon 1733691 1733787 . + . ID=Thaps22396.1;Parent=Thaps22396;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1733964 1734256 . + 0 ID=Thaps22396;Parent=Thaps22396;rank=2 chr4 . exon 1733964 1734256 . + . ID=Thaps22396.2;Parent=Thaps22396;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . exon 1725092 1725298 . - . ID=Thaps28004.4;Parent=Thaps28004;constitutive=1;rank=4 chr4 . exon 1725473 1725718 . - . ID=Thaps28004.3;Parent=Thaps28004;constitutive=1;rank=3 chr4 . exon 1725923 1726187 . - . ID=Thaps28004.2;Parent=Thaps28004;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 1726269 1726360 . - . ID=Thaps28004.1;Parent=Thaps28004;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . repeat_region 1735042 1735084 . ? . description=dust chr4 ensembl protein_coding_gene 1736112 1737486 . - . ID=Thaps268745;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C037];external_name=Thaps268745;logic_name=jgi_thaps3 chr4 ensembl transcript 1736112 1737486 . - . ID=Thaps268745;Parent=Thaps268745;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1736112 1737046 . - 0 ID=Thaps268745;Parent=Thaps268745;rank=3 chr4 . exon 1736112 1737046 . - . ID=Thaps268745.3;Parent=Thaps268745;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1737125 1737184 . - 0 ID=Thaps268745;Parent=Thaps268745;rank=2 chr4 . exon 1737125 1737184 . - . ID=Thaps268745.2;Parent=Thaps268745;constitutive=1;rank=2 chr4 . CDS 1737258 1737486 . - 0 ID=Thaps268745;Parent=Thaps268745;rank=1 chr4 . exon 1737258 1737486 . - . ID=Thaps268745.1;Parent=Thaps268745;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1739420 1742839 . - . ID=Thaps268746;biotype=protein_coding;description=Ran binding protein 7 [Source:UniProtKB/TrEMBL%3BAcc:B8C038];external_name=Thaps268746;logic_name=jgi_thaps3 chr4 ensembl transcript 1739420 1742839 . - . ID=Thaps268746;Parent=Thaps268746;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1739420 1740910 . - 0 ID=Thaps268746;Parent=Thaps268746;rank=3 chr4 . exon 1739420 1740910 . - . ID=Thaps268746.3;Parent=Thaps268746;constitutive=1;rank=3 chr4 . CDS 1740989 1742548 . - 0 ID=Thaps268746;Parent=Thaps268746;rank=2 chr4 . exon 1740989 1742548 . - . ID=Thaps268746.2;Parent=Thaps268746;constitutive=1;rank=2 chr4 . CDS 1742669 1742839 . - 0 ID=Thaps268746;Parent=Thaps268746;rank=1 chr4 . exon 1742669 1742839 . - . ID=Thaps268746.1;Parent=Thaps268746;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1735084 1736025 . + . ID=Thaps4718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C036];external_name=Thaps4718;logic_name=jgi_thaps3 chr4 ensembl transcript 1735084 1736025 . + . ID=Thaps4718;Parent=Thaps4718;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1735084 1735600 . + 0 ID=Thaps4718;Parent=Thaps4718;rank=1 chr4 . exon 1735084 1735600 . + . ID=Thaps4718.1;Parent=Thaps4718;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1735712 1736025 . + 0 ID=Thaps4718;Parent=Thaps4718;rank=2 chr4 . exon 1735712 1736025 . + . ID=Thaps4718.2;Parent=Thaps4718;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 1753112 1754086 . - . ID=Thaps22399;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C041];external_name=Thaps22399;logic_name=jgi_thaps3 chr4 ensembl transcript 1753112 1754086 . - . ID=Thaps22399;Parent=Thaps22399;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1753112 1754086 . - 0 ID=Thaps22399;Parent=Thaps22399;rank=1 chr4 . exon 1753112 1754086 . - . ID=Thaps22399.1;Parent=Thaps22399;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1750649 1750852 . - . ID=Thaps262266;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C040];external_name=MYB1;logic_name=jgi_thaps3 chr4 ensembl transcript 1750649 1750852 . - . ID=Thaps262266;Parent=Thaps262266;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1750649 1750852 . - 0 ID=Thaps262266;Parent=Thaps262266;rank=1 chr4 . exon 1750649 1750852 . - . ID=Thaps262266.1;Parent=Thaps262266;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1749596 1750554 . + . ID=Thaps4722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C039];external_name=Thaps4722;logic_name=jgi_thaps3 chr4 ensembl transcript 1749596 1750554 . + . ID=Thaps4722;Parent=Thaps4722;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1749596 1749877 . + 0 ID=Thaps4722;Parent=Thaps4722;rank=1 chr4 . exon 1749596 1749877 . + . ID=Thaps4722.1;Parent=Thaps4722;constitutive=1;rank=1 chr4 . CDS 1749983 1750019 . + 0 ID=Thaps4722;Parent=Thaps4722;rank=2 chr4 . exon 1749983 1750019 . + . ID=Thaps4722.2;Parent=Thaps4722;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1750112 1750178 . + 0 ID=Thaps4722;Parent=Thaps4722;rank=3 chr4 . exon 1750112 1750178 . + . ID=Thaps4722.3;Parent=Thaps4722;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1750317 1750554 . + 0 ID=Thaps4722;Parent=Thaps4722;rank=4 chr4 . exon 1750317 1750554 . + . ID=Thaps4722.4;Parent=Thaps4722;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 1762564 1762869 . - . ID=Thaps33407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C044];external_name=Thaps33407;logic_name=jgi_thaps3 chr4 ensembl transcript 1762564 1762869 . - . ID=Thaps33407;Parent=Thaps33407;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1762564 1762869 . - 0 ID=Thaps33407;Parent=Thaps33407;rank=1 chr4 . exon 1762564 1762869 . - . ID=Thaps33407.1;Parent=Thaps33407;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1754627 1755823 . + . ID=Thaps4725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C042];external_name=Thaps4725;logic_name=jgi_thaps3 chr4 ensembl transcript 1754627 1755823 . + . ID=Thaps4725;Parent=Thaps4725;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1754627 1754854 . + 0 ID=Thaps4725;Parent=Thaps4725;rank=1 chr4 . exon 1754627 1754854 . + . ID=Thaps4725.1;Parent=Thaps4725;constitutive=1;rank=1 chr4 . CDS 1754933 1755823 . + 0 ID=Thaps4725;Parent=Thaps4725;rank=2 chr4 . exon 1754933 1755823 . + . ID=Thaps4725.2;Parent=Thaps4725;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1756099 1761899 . - . ID=Thaps4726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C043];external_name=Thaps4726;logic_name=jgi_thaps3 chr4 ensembl transcript 1756099 1761899 . - . ID=Thaps4726;Parent=Thaps4726;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1756099 1756119 . - 0 ID=Thaps4726;Parent=Thaps4726;rank=2 chr4 . exon 1756099 1756119 . - . ID=Thaps4726.2;Parent=Thaps4726;constitutive=1;rank=2 chr4 . CDS 1756221 1761899 . - 0 ID=Thaps4726;Parent=Thaps4726;rank=1 chr4 . exon 1756221 1761899 . - . ID=Thaps4726.1;Parent=Thaps4726;constitutive=1;rank=1 chr4 . repeat_region 1768594 1768646 . ? . description=dust chr4 . repeat_region 1769933 1769953 . ? . description=trf chr4 . repeat_region 1769933 1769953 . ? . description=dust chr4 . repeat_region 1770339 1770399 . ? . description=dust chr4 ensembl protein_coding_gene 1766068 1769422 . - . ID=Thaps22401;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C045];external_name=Thaps22401;logic_name=jgi_thaps3 chr4 ensembl transcript 1766068 1769422 . - . ID=Thaps22401;Parent=Thaps22401;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1766068 1766094 . - 0 ID=Thaps22401;Parent=Thaps22401;rank=4 chr4 . exon 1766068 1766094 . - . ID=Thaps22401.4;Parent=Thaps22401;constitutive=1;rank=4 chr4 . CDS 1766155 1767803 . - 0 ID=Thaps22401;Parent=Thaps22401;rank=3 chr4 . exon 1766155 1767803 . - . ID=Thaps22401.3;Parent=Thaps22401;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1767910 1768573 . - 0 ID=Thaps22401;Parent=Thaps22401;rank=2 chr4 . exon 1767910 1768573 . - . ID=Thaps22401.2;Parent=Thaps22401;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1768709 1769422 . - 0 ID=Thaps22401;Parent=Thaps22401;rank=1 chr4 . exon 1768709 1769422 . - . ID=Thaps22401.1;Parent=Thaps22401;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1770618 1771370 . - . ID=Thaps33310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C046];external_name=Thaps33310;logic_name=jgi_thaps3 chr4 ensembl transcript 1770618 1771370 . - . ID=Thaps33310;Parent=Thaps33310;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1770618 1770867 . - 0 ID=Thaps33310;Parent=Thaps33310;rank=3 chr4 . exon 1770618 1770867 . - . ID=Thaps33310.3;Parent=Thaps33310;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1770952 1771148 . - 0 ID=Thaps33310;Parent=Thaps33310;rank=2 chr4 . exon 1770952 1771148 . - . ID=Thaps33310.2;Parent=Thaps33310;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1771242 1771370 . - 0 ID=Thaps33310;Parent=Thaps33310;rank=1 chr4 . exon 1771242 1771370 . - . ID=Thaps33310.1;Parent=Thaps33310;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1771951 1774233 . + . ID=Thaps4729;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C047];external_name=Thaps4729;logic_name=jgi_thaps3 chr4 ensembl transcript 1771951 1774233 . + . ID=Thaps4729;Parent=Thaps4729;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1771951 1774233 . + 0 ID=Thaps4729;Parent=Thaps4729;rank=1 chr4 . exon 1771951 1774233 . + . ID=Thaps4729.1;Parent=Thaps4729;constitutive=1;rank=1 chr4 ensembl gene 1777370 1778542 . + . ID=Thaps262271;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr4 ensembl transcript 1777370 1778542 . + . ID=Thaps262271;Parent=Thaps262271;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr4 . exon 1777370 1777735 . + . ID=Thaps262271.1;Parent=Thaps262271;constitutive=1;rank=1 chr4 . exon 1777823 1778005 . + . ID=Thaps262271.2;Parent=Thaps262271;constitutive=1;rank=2 chr4 . exon 1778072 1778542 . + . ID=Thaps262271.3;Parent=Thaps262271;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 1782244 1783055 . + . ID=Thaps262272;biotype=protein_coding;description=Oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8C050];external_name=Thaps262272;logic_name=jgi_thaps3 chr4 ensembl transcript 1782244 1783055 . + . ID=Thaps262272;Parent=Thaps262272;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1782244 1782322 . + 0 ID=Thaps262272;Parent=Thaps262272;rank=1 chr4 . exon 1782244 1782322 . + . ID=Thaps262272.1;Parent=Thaps262272;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1782371 1783055 . + 0 ID=Thaps262272;Parent=Thaps262272;rank=2 chr4 . exon 1782371 1783055 . + . ID=Thaps262272.2;Parent=Thaps262272;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1783668 1785272 . + . ID=Thaps33946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C051];external_name=Thaps33946;logic_name=jgi_thaps3 chr4 ensembl transcript 1783668 1785272 . + . ID=Thaps33946;Parent=Thaps33946;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1783668 1784544 . + 0 ID=Thaps33946;Parent=Thaps33946;rank=1 chr4 . exon 1783668 1784544 . + . ID=Thaps33946.1;Parent=Thaps33946;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1784632 1784832 . + 0 ID=Thaps33946;Parent=Thaps33946;rank=2 chr4 . CDS 1785082 1785272 . + 0 ID=Thaps33946;Parent=Thaps33946;rank=3 chr4 ensembl protein_coding_gene 1774564 1776027 . - . ID=Thaps4730;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C048];external_name=Thaps4730;logic_name=jgi_thaps3 chr4 ensembl transcript 1774564 1776027 . - . ID=Thaps4730;Parent=Thaps4730;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1774564 1776027 . - 0 ID=Thaps4730;Parent=Thaps4730;rank=1 chr4 . exon 1774564 1776027 . - . ID=Thaps4730.1;Parent=Thaps4730;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1778629 1780671 . - . ID=Thaps4732;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C049];external_name=Thaps4732;logic_name=jgi_thaps3 chr4 ensembl transcript 1778629 1780671 . - . ID=Thaps4732;Parent=Thaps4732;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1778629 1780671 . - 0 ID=Thaps4732;Parent=Thaps4732;rank=1 chr4 . exon 1778629 1780671 . - . ID=Thaps4732.1;Parent=Thaps4732;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1791943 1792449 . + . ID=Thaps18796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C055];external_name=Thaps18796;logic_name=jgi_thaps3 chr4 ensembl transcript 1791943 1792449 . + . ID=Thaps18796;Parent=Thaps18796;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1791943 1792449 . + 0 ID=Thaps18796;Parent=Thaps18796;rank=1 chr4 . exon 1791943 1792449 . + . ID=Thaps18796.1;Parent=Thaps18796;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1793607 1795499 . - . ID=Thaps22404;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C057];external_name=Thaps22404;logic_name=jgi_thaps3 chr4 ensembl transcript 1793607 1795499 . - . ID=Thaps22404;Parent=Thaps22404;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1793607 1795143 . - 0 ID=Thaps22404;Parent=Thaps22404;rank=2 chr4 . exon 1793607 1795143 . - . ID=Thaps22404.2;Parent=Thaps22404;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1795213 1795499 . - 0 ID=Thaps22404;Parent=Thaps22404;rank=1 chr4 ensembl protein_coding_gene 1792986 1793533 . + . ID=Thaps262275;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C056];external_name=Thaps262275;logic_name=jgi_thaps3 chr4 ensembl transcript 1792986 1793533 . + . ID=Thaps262275;Parent=Thaps262275;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1792986 1793533 . + 0 ID=Thaps262275;Parent=Thaps262275;rank=1 chr4 . exon 1792986 1793533 . + . ID=Thaps262275.1;Parent=Thaps262275;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1785325 1785969 . - . ID=Thaps33511;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C052];external_name=Thaps33511;logic_name=jgi_thaps3 chr4 ensembl transcript 1785325 1785969 . - . ID=Thaps33511;Parent=Thaps33511;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1785325 1785969 . - 0 ID=Thaps33511;Parent=Thaps33511;rank=1 chr4 . exon 1785325 1785969 . - . ID=Thaps33511.1;Parent=Thaps33511;constitutive=1;rank=1 chr4 . exon 1784632 1784832 . + . ID=Thaps33946.2;Parent=Thaps33946;constitutive=1;rank=2 chr4 . exon 1785082 1785272 . + . ID=Thaps33946.3;Parent=Thaps33946;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1788363 1789903 . + . ID=Thaps4736;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C053];external_name=Thaps4736;logic_name=jgi_thaps3 chr4 ensembl transcript 1788363 1789903 . + . ID=Thaps4736;Parent=Thaps4736;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1788363 1789445 . + 0 ID=Thaps4736;Parent=Thaps4736;rank=1 chr4 . exon 1788363 1789445 . + . ID=Thaps4736.1;Parent=Thaps4736;constitutive=1;rank=1 chr4 . CDS 1789640 1789903 . + 0 ID=Thaps4736;Parent=Thaps4736;rank=2 chr4 . exon 1789640 1789903 . + . ID=Thaps4736.2;Parent=Thaps4736;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1790150 1791297 . - . ID=Thaps4737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C054];external_name=Thaps4737;logic_name=jgi_thaps3 chr4 ensembl transcript 1790150 1791297 . - . ID=Thaps4737;Parent=Thaps4737;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1790150 1790965 . - 0 ID=Thaps4737;Parent=Thaps4737;rank=2 chr4 . exon 1790150 1790965 . - . ID=Thaps4737.2;Parent=Thaps4737;constitutive=1;rank=2 chr4 . CDS 1791106 1791297 . - 0 ID=Thaps4737;Parent=Thaps4737;rank=1 chr4 . exon 1791106 1791297 . - . ID=Thaps4737.1;Parent=Thaps4737;constitutive=1;rank=1 chr4 . exon 1795213 1795499 . - . ID=Thaps22404.1;Parent=Thaps22404;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1800377 1802232 . + . ID=Thaps22405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C059];external_name=Thaps22405;logic_name=jgi_thaps3 chr4 ensembl transcript 1800377 1802232 . + . ID=Thaps22405;Parent=Thaps22405;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1800377 1800692 . + 0 ID=Thaps22405;Parent=Thaps22405;rank=1 chr4 . exon 1800377 1800692 . + . ID=Thaps22405.1;Parent=Thaps22405;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1800804 1801295 . + 0 ID=Thaps22405;Parent=Thaps22405;rank=2 chr4 . exon 1800804 1801295 . + . ID=Thaps22405.2;Parent=Thaps22405;constitutive=1;rank=2 chr4 . CDS 1801389 1801869 . + 0 ID=Thaps22405;Parent=Thaps22405;rank=3 chr4 . exon 1801389 1801869 . + . ID=Thaps22405.3;Parent=Thaps22405;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1801989 1802232 . + 0 ID=Thaps22405;Parent=Thaps22405;rank=4 chr4 . exon 1801989 1802232 . + . ID=Thaps22405.4;Parent=Thaps22405;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 1797876 1799444 . + . ID=Thaps4740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C058];external_name=Thaps4740;logic_name=jgi_thaps3 chr4 ensembl transcript 1797876 1799444 . + . ID=Thaps4740;Parent=Thaps4740;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1797876 1799444 . + 0 ID=Thaps4740;Parent=Thaps4740;rank=1 chr4 . exon 1797876 1799444 . + . ID=Thaps4740.1;Parent=Thaps4740;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1802773 1805814 . - . ID=Thaps4742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C060];external_name=Thaps4742;logic_name=jgi_thaps3 chr4 ensembl transcript 1802773 1805814 . - . ID=Thaps4742;Parent=Thaps4742;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1802773 1804853 . - 0 ID=Thaps4742;Parent=Thaps4742;rank=3 chr4 . exon 1802773 1804853 . - . ID=Thaps4742.3;Parent=Thaps4742;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1805015 1805063 . - 0 ID=Thaps4742;Parent=Thaps4742;rank=2 chr4 . CDS 1805155 1805814 . - 0 ID=Thaps4742;Parent=Thaps4742;rank=1 chr4 . repeat_region 1806270 1806277 . ? . description=dust chr4 . repeat_region 1807446 1807485 . ? . description=dust chr4 . repeat_region 1807446 1807486 . ? . description=trf chr4 . repeat_region 1812700 1812731 . ? . description=trf chr4 . repeat_region 1812700 1812731 . ? . description=dust chr4 ensembl protein_coding_gene 1813161 1813868 . + . ID=Thaps33376;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C064];external_name=Thaps33376;logic_name=jgi_thaps3 chr4 ensembl transcript 1813161 1813868 . + . ID=Thaps33376;Parent=Thaps33376;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1813161 1813868 . + 0 ID=Thaps33376;Parent=Thaps33376;rank=1 chr4 . exon 1813161 1813868 . + . ID=Thaps33376.1;Parent=Thaps33376;constitutive=1;rank=1 chr4 . exon 1805015 1805063 . - . ID=Thaps4742.2;Parent=Thaps4742;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 1805155 1805814 . - . ID=Thaps4742.1;Parent=Thaps4742;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1806396 1807447 . + . ID=Thaps4743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C061];external_name=Thaps4743;logic_name=jgi_thaps3 chr4 ensembl transcript 1806396 1807447 . + . ID=Thaps4743;Parent=Thaps4743;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1806396 1806398 . + 0 ID=Thaps4743;Parent=Thaps4743;rank=1 chr4 . exon 1806396 1806398 . + . ID=Thaps4743.1;Parent=Thaps4743;constitutive=1;rank=1 chr4 . CDS 1806515 1807447 . + 0 ID=Thaps4743;Parent=Thaps4743;rank=2 chr4 . exon 1806515 1807447 . + . ID=Thaps4743.2;Parent=Thaps4743;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1807925 1810555 . + . ID=Thaps4744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C062];external_name=Thaps4744;logic_name=jgi_thaps3 chr4 ensembl transcript 1807925 1810555 . + . ID=Thaps4744;Parent=Thaps4744;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1807925 1807963 . + 0 ID=Thaps4744;Parent=Thaps4744;rank=1 chr4 . exon 1807925 1807963 . + . ID=Thaps4744.1;Parent=Thaps4744;constitutive=1;rank=1 chr4 . CDS 1808231 1808500 . + 0 ID=Thaps4744;Parent=Thaps4744;rank=2 chr4 . exon 1808231 1808500 . + . ID=Thaps4744.2;Parent=Thaps4744;constitutive=1;rank=2 chr4 . CDS 1808612 1808722 . + 0 ID=Thaps4744;Parent=Thaps4744;rank=3 chr4 . exon 1808612 1808722 . + . ID=Thaps4744.3;Parent=Thaps4744;constitutive=1;rank=3 chr4 . CDS 1808878 1808900 . + 0 ID=Thaps4744;Parent=Thaps4744;rank=4 chr4 . exon 1808878 1808900 . + . ID=Thaps4744.4;Parent=Thaps4744;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1809016 1809076 . + 0 ID=Thaps4744;Parent=Thaps4744;rank=5 chr4 . exon 1809016 1809076 . + . ID=Thaps4744.5;Parent=Thaps4744;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 1809172 1809444 . + 0 ID=Thaps4744;Parent=Thaps4744;rank=6 chr4 . exon 1809172 1809444 . + . ID=Thaps4744.6;Parent=Thaps4744;constitutive=1;rank=6 chr4 . CDS 1809660 1809781 . + 0 ID=Thaps4744;Parent=Thaps4744;rank=7 chr4 . exon 1809660 1809781 . + . ID=Thaps4744.7;Parent=Thaps4744;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . CDS 1809826 1810555 . + 0 ID=Thaps4744;Parent=Thaps4744;rank=8 chr4 . exon 1809826 1810555 . + . ID=Thaps4744.8;Parent=Thaps4744;constitutive=1;ensembl_end_phase=1;rank=8 chr4 ensembl protein_coding_gene 1810937 1812228 . + . ID=Thaps4745;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C063];external_name=Thaps4745;logic_name=jgi_thaps3 chr4 ensembl transcript 1810937 1812228 . + . ID=Thaps4745;Parent=Thaps4745;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1810937 1811230 . + 0 ID=Thaps4745;Parent=Thaps4745;rank=1 chr4 . exon 1810937 1811230 . + . ID=Thaps4745.1;Parent=Thaps4745;constitutive=1;rank=1 chr4 . CDS 1811251 1812228 . + 0 ID=Thaps4745;Parent=Thaps4745;rank=2 chr4 . exon 1811251 1812228 . + . ID=Thaps4745.2;Parent=Thaps4745;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1814568 1827800 . + . ID=Thaps40445;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C065];external_name=Thaps40445;logic_name=jgi_thaps3 chr4 ensembl transcript 1814568 1827800 . + . ID=Thaps40445;Parent=Thaps40445;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1814568 1827800 . + 0 ID=Thaps40445;Parent=Thaps40445;rank=1 chr4 . exon 1814568 1827800 . + . ID=Thaps40445.1;Parent=Thaps40445;constitutive=1;rank=1 chr4 . repeat_region 1831753 1831788 . ? . description=trf chr4 ensembl protein_coding_gene 1832188 1833216 . - . ID=Thaps22407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C068];external_name=Thaps22407;logic_name=jgi_thaps3 chr4 ensembl transcript 1832188 1833216 . - . ID=Thaps22407;Parent=Thaps22407;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1832188 1833216 . - 0 ID=Thaps22407;Parent=Thaps22407;rank=1 chr4 . exon 1832188 1833216 . - . ID=Thaps22407.1;Parent=Thaps22407;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1829979 1831273 . + . ID=Thaps262279;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C067];external_name=Thaps262279;logic_name=jgi_thaps3 chr4 ensembl transcript 1829979 1831273 . + . ID=Thaps262279;Parent=Thaps262279;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1829979 1830706 . + 0 ID=Thaps262279;Parent=Thaps262279;rank=1 chr4 . exon 1829979 1830706 . + . ID=Thaps262279.1;Parent=Thaps262279;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1830901 1831273 . + 0 ID=Thaps262279;Parent=Thaps262279;rank=2 chr4 . exon 1830901 1831273 . + . ID=Thaps262279.2;Parent=Thaps262279;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1833682 1834638 . + . ID=Thaps413;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C069];external_name=Thaps413;logic_name=jgi_thaps3 chr4 ensembl transcript 1833682 1834638 . + . ID=Thaps413;Parent=Thaps413;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1833682 1834638 . + 0 ID=Thaps413;Parent=Thaps413;rank=1 chr4 . exon 1833682 1834638 . + . ID=Thaps413.1;Parent=Thaps413;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1827888 1829552 . - . ID=Thaps4747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C066];external_name=Thaps4747;logic_name=jgi_thaps3 chr4 ensembl transcript 1827888 1829552 . - . ID=Thaps4747;Parent=Thaps4747;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1827888 1828422 . - 0 ID=Thaps4747;Parent=Thaps4747;rank=3 chr4 . exon 1827888 1828422 . - . ID=Thaps4747.3;Parent=Thaps4747;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1828505 1829254 . - 0 ID=Thaps4747;Parent=Thaps4747;rank=2 chr4 . exon 1828505 1829254 . - . ID=Thaps4747.2;Parent=Thaps4747;constitutive=1;rank=2 chr4 . CDS 1829332 1829552 . - 0 ID=Thaps4747;Parent=Thaps4747;rank=1 chr4 . exon 1829332 1829552 . - . ID=Thaps4747.1;Parent=Thaps4747;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1843171 1846182 . + . ID=Thaps26212;biotype=protein_coding;description=Coatomer protein subunit beta 1 [Source:UniProtKB/TrEMBL%3BAcc:B8C072];external_name=COP2;logic_name=jgi_thaps3 chr4 ensembl transcript 1843171 1846182 . + . ID=Thaps26212;Parent=Thaps26212;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1843171 1843281 . + 0 ID=Thaps26212;Parent=Thaps26212;rank=1 chr4 . exon 1843171 1843281 . + . ID=Thaps26212.1;Parent=Thaps26212;constitutive=1;rank=1 chr4 . CDS 1843354 1844932 . + 0 ID=Thaps26212;Parent=Thaps26212;rank=2 chr4 . exon 1843354 1844932 . + . ID=Thaps26212.2;Parent=Thaps26212;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1845083 1845773 . + 0 ID=Thaps26212;Parent=Thaps26212;rank=3 chr4 . CDS 1846023 1846182 . + 0 ID=Thaps26212;Parent=Thaps26212;rank=4 chr4 ensembl protein_coding_gene 1834785 1836012 . - . ID=Thaps4751;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C070];external_name=Thaps4751;logic_name=jgi_thaps3 chr4 ensembl transcript 1834785 1836012 . - . ID=Thaps4751;Parent=Thaps4751;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1834785 1836012 . - 0 ID=Thaps4751;Parent=Thaps4751;rank=1 chr4 . exon 1834785 1836012 . - . ID=Thaps4751.1;Parent=Thaps4751;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1836392 1838685 . - . ID=Thaps4752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C071];external_name=Thaps4752;logic_name=jgi_thaps3 chr4 ensembl transcript 1836392 1838685 . - . ID=Thaps4752;Parent=Thaps4752;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1836392 1837462 . - 0 ID=Thaps4752;Parent=Thaps4752;rank=5 chr4 . exon 1836392 1837462 . - . ID=Thaps4752.5;Parent=Thaps4752;constitutive=1;rank=5 chr4 . CDS 1837499 1837771 . - 0 ID=Thaps4752;Parent=Thaps4752;rank=4 chr4 . exon 1837499 1837771 . - . ID=Thaps4752.4;Parent=Thaps4752;constitutive=1;rank=4 chr4 . CDS 1837867 1837911 . - 0 ID=Thaps4752;Parent=Thaps4752;rank=3 chr4 . exon 1837867 1837911 . - . ID=Thaps4752.3;Parent=Thaps4752;constitutive=1;rank=3 chr4 . CDS 1838221 1838331 . - 0 ID=Thaps4752;Parent=Thaps4752;rank=2 chr4 . exon 1838221 1838331 . - . ID=Thaps4752.2;Parent=Thaps4752;constitutive=1;rank=2 chr4 . CDS 1838443 1838685 . - 0 ID=Thaps4752;Parent=Thaps4752;rank=1 chr4 . exon 1838443 1838685 . - . ID=Thaps4752.1;Parent=Thaps4752;constitutive=1;rank=1 chr4 . repeat_region 1851671 1851690 . ? . description=trf chr4 . repeat_region 1851671 1851690 . ? . description=dust chr4 ensembl protein_coding_gene 1846435 1847463 . - . ID=Thaps22409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C073];external_name=Thaps22409;logic_name=jgi_thaps3 chr4 ensembl transcript 1846435 1847463 . - . ID=Thaps22409;Parent=Thaps22409;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1846435 1846775 . - 0 ID=Thaps22409;Parent=Thaps22409;rank=3 chr4 . exon 1846435 1846775 . - . ID=Thaps22409.3;Parent=Thaps22409;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1846862 1847335 . - 0 ID=Thaps22409;Parent=Thaps22409;rank=2 chr4 . exon 1846862 1847335 . - . ID=Thaps22409.2;Parent=Thaps22409;constitutive=1;rank=2 chr4 . CDS 1847415 1847463 . - 0 ID=Thaps22409;Parent=Thaps22409;rank=1 chr4 . exon 1847415 1847463 . - . ID=Thaps22409.1;Parent=Thaps22409;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 1845083 1845773 . + . ID=Thaps26212.3;Parent=Thaps26212;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . exon 1846023 1846182 . + . ID=Thaps26212.4;Parent=Thaps26212;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 1848642 1849635 . - . ID=Thaps4755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C074];external_name=Thaps4755;logic_name=jgi_thaps3 chr4 ensembl transcript 1848642 1849635 . - . ID=Thaps4755;Parent=Thaps4755;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1848642 1848903 . - 0 ID=Thaps4755;Parent=Thaps4755;rank=3 chr4 . exon 1848642 1848903 . - . ID=Thaps4755.3;Parent=Thaps4755;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1849015 1849328 . - 0 ID=Thaps4755;Parent=Thaps4755;rank=2 chr4 . exon 1849015 1849328 . - . ID=Thaps4755.2;Parent=Thaps4755;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1849438 1849635 . - 0 ID=Thaps4755;Parent=Thaps4755;rank=1 chr4 . exon 1849438 1849635 . - . ID=Thaps4755.1;Parent=Thaps4755;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1850200 1852080 . - . ID=Thaps4756;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C075];external_name=Thaps4756;logic_name=jgi_thaps3 chr4 ensembl transcript 1850200 1852080 . - . ID=Thaps4756;Parent=Thaps4756;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1850200 1852080 . - 0 ID=Thaps4756;Parent=Thaps4756;rank=1 chr4 . exon 1850200 1852080 . - . ID=Thaps4756.1;Parent=Thaps4756;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1852265 1854025 . + . ID=Thaps4757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C076];external_name=Thaps4757;logic_name=jgi_thaps3 chr4 ensembl transcript 1852265 1854025 . + . ID=Thaps4757;Parent=Thaps4757;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1852265 1854025 . + 0 ID=Thaps4757;Parent=Thaps4757;rank=1 chr4 . exon 1852265 1854025 . + . ID=Thaps4757.1;Parent=Thaps4757;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1854148 1855881 . - . ID=Thaps4758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C077];external_name=Thaps4758;logic_name=jgi_thaps3 chr4 ensembl transcript 1854148 1855881 . - . ID=Thaps4758;Parent=Thaps4758;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1854148 1854957 . - 0 ID=Thaps4758;Parent=Thaps4758;rank=2 chr4 . exon 1854148 1854957 . - . ID=Thaps4758.2;Parent=Thaps4758;constitutive=1;rank=2 chr4 . CDS 1855051 1855881 . - 0 ID=Thaps4758;Parent=Thaps4758;rank=1 chr4 ensembl protein_coding_gene 1858267 1860072 . - . ID=Thaps262283;biotype=protein_coding;description=4-coumarate-coa ligase [Source:UniProtKB/TrEMBL%3BAcc:B8C078];external_name=Thaps262283;logic_name=jgi_thaps3 chr4 ensembl transcript 1858267 1860072 . - . ID=Thaps262283;Parent=Thaps262283;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1858267 1858562 . - 0 ID=Thaps262283;Parent=Thaps262283;rank=7 chr4 . exon 1858267 1858562 . - . ID=Thaps262283.7;Parent=Thaps262283;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . CDS 1858631 1858781 . - 0 ID=Thaps262283;Parent=Thaps262283;rank=6 chr4 . exon 1858631 1858781 . - . ID=Thaps262283.6;Parent=Thaps262283;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 1858863 1858967 . - 0 ID=Thaps262283;Parent=Thaps262283;rank=5 chr4 . exon 1858863 1858967 . - . ID=Thaps262283.5;Parent=Thaps262283;constitutive=1;rank=5 chr4 . CDS 1859040 1859417 . - 0 ID=Thaps262283;Parent=Thaps262283;rank=4 chr4 . exon 1859040 1859417 . - . ID=Thaps262283.4;Parent=Thaps262283;constitutive=1;rank=4 chr4 . CDS 1859500 1859588 . - 0 ID=Thaps262283;Parent=Thaps262283;rank=3 chr4 . exon 1859500 1859588 . - . ID=Thaps262283.3;Parent=Thaps262283;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1859661 1859737 . - 0 ID=Thaps262283;Parent=Thaps262283;rank=2 chr4 . exon 1859661 1859737 . - . ID=Thaps262283.2;Parent=Thaps262283;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1859768 1860072 . - 0 ID=Thaps262283;Parent=Thaps262283;rank=1 chr4 . exon 1859768 1860072 . - . ID=Thaps262283.1;Parent=Thaps262283;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1863331 1864359 . + . ID=Thaps28025;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C081];external_name=Thaps28025;logic_name=jgi_thaps3 chr4 ensembl transcript 1863331 1864359 . + . ID=Thaps28025;Parent=Thaps28025;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1863331 1864359 . + 0 ID=Thaps28025;Parent=Thaps28025;rank=1 chr4 . exon 1863331 1864359 . + . ID=Thaps28025.1;Parent=Thaps28025;constitutive=1;rank=1 chr4 . exon 1855051 1855881 . - . ID=Thaps4758.1;Parent=Thaps4758;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1860760 1861698 . + . ID=Thaps4760;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C079];external_name=Thaps4760;logic_name=jgi_thaps3 chr4 ensembl transcript 1860760 1861698 . + . ID=Thaps4760;Parent=Thaps4760;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1860760 1861698 . + 0 ID=Thaps4760;Parent=Thaps4760;rank=1 chr4 . exon 1860760 1861698 . + . ID=Thaps4760.1;Parent=Thaps4760;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1861850 1862785 . - . ID=Thaps4761;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C080];external_name=Thaps4761;logic_name=jgi_thaps3 chr4 ensembl transcript 1861850 1862785 . - . ID=Thaps4761;Parent=Thaps4761;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1861850 1861879 . - 0 ID=Thaps4761;Parent=Thaps4761;rank=3 chr4 . exon 1861850 1861879 . - . ID=Thaps4761.3;Parent=Thaps4761;constitutive=1;rank=3 chr4 . CDS 1862022 1862468 . - 0 ID=Thaps4761;Parent=Thaps4761;rank=2 chr4 . exon 1862022 1862468 . - . ID=Thaps4761.2;Parent=Thaps4761;constitutive=1;rank=2 chr4 . CDS 1862546 1862785 . - 0 ID=Thaps4761;Parent=Thaps4761;rank=1 chr4 . exon 1862546 1862785 . - . ID=Thaps4761.1;Parent=Thaps4761;constitutive=1;rank=1 chr4 . repeat_region 1871635 1871679 . ? . description=trf chr4 ensembl protein_coding_gene 1866768 1868699 . + . ID=Thaps22413;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C082];external_name=Thaps22413;logic_name=jgi_thaps3 chr4 ensembl transcript 1866768 1868699 . + . ID=Thaps22413;Parent=Thaps22413;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1866768 1868699 . + 0 ID=Thaps22413;Parent=Thaps22413;rank=1 chr4 . exon 1866768 1868699 . + . ID=Thaps22413.1;Parent=Thaps22413;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1868996 1870573 . - . ID=Thaps22414;biotype=protein_coding;description=Putative uncharacterized protein HSF2 [Source:UniProtKB/TrEMBL%3BAcc:B8C083];external_name=HSF2;logic_name=jgi_thaps3 chr4 ensembl transcript 1868996 1870573 . - . ID=Thaps22414;Parent=Thaps22414;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1868996 1870074 . - 0 ID=Thaps22414;Parent=Thaps22414;rank=2 chr4 . exon 1868996 1870074 . - . ID=Thaps22414.2;Parent=Thaps22414;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1870231 1870573 . - 0 ID=Thaps22414;Parent=Thaps22414;rank=1 chr4 . exon 1870231 1870573 . - . ID=Thaps22414.1;Parent=Thaps22414;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1874096 1875121 . - . ID=Thaps28028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C085];external_name=Thaps28028;logic_name=jgi_thaps3 chr4 ensembl transcript 1874096 1875121 . - . ID=Thaps28028;Parent=Thaps28028;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1874096 1874583 . - 0 ID=Thaps28028;Parent=Thaps28028;rank=2 chr4 . exon 1874096 1874583 . - . ID=Thaps28028.2;Parent=Thaps28028;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1874650 1875121 . - 0 ID=Thaps28028;Parent=Thaps28028;rank=1 chr4 ensembl protein_coding_gene 1870882 1873979 . + . ID=Thaps4765;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C084];external_name=Thaps4765;logic_name=jgi_thaps3 chr4 ensembl transcript 1870882 1873979 . + . ID=Thaps4765;Parent=Thaps4765;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1870882 1872617 . + 0 ID=Thaps4765;Parent=Thaps4765;rank=1 chr4 . exon 1870882 1872617 . + . ID=Thaps4765.1;Parent=Thaps4765;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1872700 1872765 . + 0 ID=Thaps4765;Parent=Thaps4765;rank=2 chr4 . exon 1872700 1872765 . + . ID=Thaps4765.2;Parent=Thaps4765;constitutive=1;rank=2 chr4 . CDS 1873316 1873979 . + 0 ID=Thaps4765;Parent=Thaps4765;rank=3 chr4 . exon 1873316 1873979 . + . ID=Thaps4765.3;Parent=Thaps4765;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 1879455 1880662 . + . ID=Thaps262287;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C087];external_name=Thaps262287;logic_name=jgi_thaps3 chr4 ensembl transcript 1879455 1880662 . + . ID=Thaps262287;Parent=Thaps262287;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1879455 1879769 . + 0 ID=Thaps262287;Parent=Thaps262287;rank=1 chr4 . exon 1879455 1879769 . + . ID=Thaps262287.1;Parent=Thaps262287;constitutive=1;rank=1 chr4 . CDS 1879853 1879874 . + 0 ID=Thaps262287;Parent=Thaps262287;rank=2 chr4 . exon 1879853 1879874 . + . ID=Thaps262287.2;Parent=Thaps262287;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1880035 1880082 . + 0 ID=Thaps262287;Parent=Thaps262287;rank=3 chr4 . exon 1880035 1880082 . + . ID=Thaps262287.3;Parent=Thaps262287;constitutive=1;rank=3 chr4 . CDS 1880137 1880336 . + 0 ID=Thaps262287;Parent=Thaps262287;rank=4 chr4 . exon 1880137 1880336 . + . ID=Thaps262287.4;Parent=Thaps262287;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1880435 1880662 . + 0 ID=Thaps262287;Parent=Thaps262287;rank=5 chr4 . exon 1880435 1880662 . + . ID=Thaps262287.5;Parent=Thaps262287;constitutive=1;rank=5 chr4 ensembl protein_coding_gene 1881714 1884173 . + . ID=Thaps268761;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C088];external_name=Thaps268761;logic_name=jgi_thaps3 chr4 ensembl transcript 1881714 1884173 . + . ID=Thaps268761;Parent=Thaps268761;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1881714 1881771 . + 0 ID=Thaps268761;Parent=Thaps268761;rank=1 chr4 . exon 1881714 1881771 . + . ID=Thaps268761.1;Parent=Thaps268761;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1881841 1882215 . + 0 ID=Thaps268761;Parent=Thaps268761;rank=2 chr4 . exon 1881841 1882215 . + . ID=Thaps268761.2;Parent=Thaps268761;constitutive=1;rank=2 chr4 . CDS 1882303 1882448 . + 0 ID=Thaps268761;Parent=Thaps268761;rank=3 chr4 . exon 1882303 1882448 . + . ID=Thaps268761.3;Parent=Thaps268761;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1882521 1882874 . + 0 ID=Thaps268761;Parent=Thaps268761;rank=4 chr4 . exon 1882521 1882874 . + . ID=Thaps268761.4;Parent=Thaps268761;constitutive=1;rank=4 chr4 . CDS 1882955 1883147 . + 0 ID=Thaps268761;Parent=Thaps268761;rank=5 chr4 . exon 1882955 1883147 . + . ID=Thaps268761.5;Parent=Thaps268761;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 1883531 1883740 . + 0 ID=Thaps268761;Parent=Thaps268761;rank=6 chr4 . exon 1883531 1883740 . + . ID=Thaps268761.6;Parent=Thaps268761;constitutive=1;rank=6 chr4 . CDS 1883827 1884173 . + 0 ID=Thaps268761;Parent=Thaps268761;rank=7 chr4 . exon 1883827 1884173 . + . ID=Thaps268761.7;Parent=Thaps268761;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . exon 1874650 1875121 . - . ID=Thaps28028.1;Parent=Thaps28028;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1875908 1877120 . - . ID=Thaps4767;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C086];external_name=Thaps4767;logic_name=jgi_thaps3 chr4 ensembl transcript 1875908 1877120 . - . ID=Thaps4767;Parent=Thaps4767;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1875908 1876296 . - 0 ID=Thaps4767;Parent=Thaps4767;rank=2 chr4 . exon 1875908 1876296 . - . ID=Thaps4767.2;Parent=Thaps4767;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1876466 1877120 . - 0 ID=Thaps4767;Parent=Thaps4767;rank=1 chr4 . exon 1876466 1877120 . - . ID=Thaps4767.1;Parent=Thaps4767;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 1885282 1885289 . ? . description=dust chr4 ensembl protein_coding_gene 1885417 1887255 . + . ID=Thaps22417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C089];external_name=Thaps22417;logic_name=jgi_thaps3 chr4 ensembl transcript 1885417 1887255 . + . ID=Thaps22417;Parent=Thaps22417;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1885417 1887255 . + 0 ID=Thaps22417;Parent=Thaps22417;rank=1 chr4 . exon 1885417 1887255 . + . ID=Thaps22417.1;Parent=Thaps22417;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1888376 1889101 . - . ID=Thaps4771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C090];external_name=Thaps4771;logic_name=jgi_thaps3 chr4 ensembl transcript 1888376 1889101 . - . ID=Thaps4771;Parent=Thaps4771;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1888376 1889101 . - 0 ID=Thaps4771;Parent=Thaps4771;rank=1 chr4 . exon 1888376 1889101 . - . ID=Thaps4771.1;Parent=Thaps4771;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1892925 1894077 . + . ID=Thaps4772;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C091];external_name=Thaps4772;logic_name=jgi_thaps3 chr4 ensembl transcript 1892925 1894077 . + . ID=Thaps4772;Parent=Thaps4772;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1892925 1893587 . + 0 ID=Thaps4772;Parent=Thaps4772;rank=1 chr4 . exon 1892925 1893587 . + . ID=Thaps4772.1;Parent=Thaps4772;constitutive=1;rank=1 chr4 . CDS 1893700 1894077 . + 0 ID=Thaps4772;Parent=Thaps4772;rank=2 chr4 . exon 1893700 1894077 . + . ID=Thaps4772.2;Parent=Thaps4772;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1899722 1900888 . - . ID=Thaps22418;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C095];external_name=Thaps22418;logic_name=jgi_thaps3 chr4 ensembl transcript 1899722 1900888 . - . ID=Thaps22418;Parent=Thaps22418;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1899722 1900888 . - 0 ID=Thaps22418;Parent=Thaps22418;rank=1 chr4 . exon 1899722 1900888 . - . ID=Thaps22418.1;Parent=Thaps22418;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1902130 1903170 . - . ID=Thaps33775;biotype=protein_coding;description=Methionine aminopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8C096];external_name=Thaps33775;logic_name=jgi_thaps3 chr4 ensembl transcript 1902130 1903170 . - . ID=Thaps33775;Parent=Thaps33775;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1902130 1902330 . - 0 ID=Thaps33775;Parent=Thaps33775;rank=3 chr4 . exon 1902130 1902330 . - . ID=Thaps33775.3;Parent=Thaps33775;constitutive=1;rank=3 chr4 . CDS 1902463 1902660 . - 0 ID=Thaps33775;Parent=Thaps33775;rank=2 chr4 . exon 1902463 1902660 . - . ID=Thaps33775.2;Parent=Thaps33775;constitutive=1;rank=2 chr4 . CDS 1902814 1903170 . - 0 ID=Thaps33775;Parent=Thaps33775;rank=1 chr4 . exon 1902814 1903170 . - . ID=Thaps33775.1;Parent=Thaps33775;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1895956 1896717 . + . ID=Thaps33806;biotype=protein_coding;description=Mago nashi-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C092];external_name=Thaps33806;logic_name=jgi_thaps3 chr4 ensembl transcript 1895956 1896717 . + . ID=Thaps33806;Parent=Thaps33806;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1895956 1896006 . + 0 ID=Thaps33806;Parent=Thaps33806;rank=1 chr4 . exon 1895956 1896006 . + . ID=Thaps33806.1;Parent=Thaps33806;constitutive=1;rank=1 chr4 . CDS 1896102 1896113 . + 0 ID=Thaps33806;Parent=Thaps33806;rank=2 chr4 . exon 1896102 1896113 . + . ID=Thaps33806.2;Parent=Thaps33806;constitutive=1;rank=2 chr4 . CDS 1896200 1896217 . + 0 ID=Thaps33806;Parent=Thaps33806;rank=3 chr4 . exon 1896200 1896217 . + . ID=Thaps33806.3;Parent=Thaps33806;constitutive=1;rank=3 chr4 . CDS 1896337 1896717 . + 0 ID=Thaps33806;Parent=Thaps33806;rank=4 chr4 . exon 1896337 1896717 . + . ID=Thaps33806.4;Parent=Thaps33806;constitutive=1;rank=4 chr4 ensembl protein_coding_gene 1897180 1897898 . + . ID=Thaps4774;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C093];external_name=Thaps4774;logic_name=jgi_thaps3 chr4 ensembl transcript 1897180 1897898 . + . ID=Thaps4774;Parent=Thaps4774;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1897180 1897635 . + 0 ID=Thaps4774;Parent=Thaps4774;rank=1 chr4 . exon 1897180 1897635 . + . ID=Thaps4774.1;Parent=Thaps4774;constitutive=1;rank=1 chr4 . CDS 1897728 1897898 . + 0 ID=Thaps4774;Parent=Thaps4774;rank=2 chr4 . exon 1897728 1897898 . + . ID=Thaps4774.2;Parent=Thaps4774;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1898190 1899023 . - . ID=Thaps4775;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C094];external_name=Thaps4775;logic_name=jgi_thaps3 chr4 ensembl transcript 1898190 1899023 . - . ID=Thaps4775;Parent=Thaps4775;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1898190 1899023 . - 0 ID=Thaps4775;Parent=Thaps4775;rank=1 chr4 . exon 1898190 1899023 . - . ID=Thaps4775.1;Parent=Thaps4775;constitutive=1;rank=1 chr4 . repeat_region 1909724 1909764 . ? . description=trf chr4 . repeat_region 1911577 1911636 . ? . description=trf chr4 . repeat_region 1913243 1913283 . ? . description=trf chr4 ensembl protein_coding_gene 1913317 1914258 . + . ID=Thaps262296;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0A3];external_name=Thaps262296;logic_name=jgi_thaps3 chr4 ensembl transcript 1913317 1914258 . + . ID=Thaps262296;Parent=Thaps262296;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1913317 1913518 . + 0 ID=Thaps262296;Parent=Thaps262296;rank=1 chr4 . exon 1913317 1913518 . + . ID=Thaps262296.1;Parent=Thaps262296;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1913732 1914130 . + 0 ID=Thaps262296;Parent=Thaps262296;rank=2 chr4 . exon 1913732 1914130 . + . ID=Thaps262296.2;Parent=Thaps262296;constitutive=1;rank=2 chr4 . CDS 1914164 1914258 . + 0 ID=Thaps262296;Parent=Thaps262296;rank=3 chr4 ensembl protein_coding_gene 1906266 1906841 . + . ID=Thaps33357;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C098];external_name=Thaps33357;logic_name=jgi_thaps3 chr4 ensembl transcript 1906266 1906841 . + . ID=Thaps33357;Parent=Thaps33357;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1906266 1906841 . + 0 ID=Thaps33357;Parent=Thaps33357;rank=1 chr4 . exon 1906266 1906841 . + . ID=Thaps33357.1;Parent=Thaps33357;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1904304 1905437 . + . ID=Thaps40463;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C097];external_name=Thaps40463;logic_name=jgi_thaps3 chr4 ensembl transcript 1904304 1905437 . + . ID=Thaps40463;Parent=Thaps40463;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1904304 1904900 . + 0 ID=Thaps40463;Parent=Thaps40463;rank=1 chr4 . exon 1904304 1904900 . + . ID=Thaps40463.1;Parent=Thaps40463;constitutive=1;rank=1 chr4 . CDS 1904961 1905035 . + 0 ID=Thaps40463;Parent=Thaps40463;rank=2 chr4 . exon 1904961 1905035 . + . ID=Thaps40463.2;Parent=Thaps40463;constitutive=1;rank=2 chr4 . CDS 1905078 1905437 . + 0 ID=Thaps40463;Parent=Thaps40463;rank=3 chr4 . exon 1905078 1905437 . + . ID=Thaps40463.3;Parent=Thaps40463;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 1907051 1908291 . - . ID=Thaps416;biotype=protein_coding;description=Replication factor C 37 KD subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C099];external_name=RFC_3;logic_name=jgi_thaps3 chr4 ensembl transcript 1907051 1908291 . - . ID=Thaps416;Parent=Thaps416;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1907051 1907766 . - 0 ID=Thaps416;Parent=Thaps416;rank=3 chr4 . exon 1907051 1907766 . - . ID=Thaps416.3;Parent=Thaps416;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1907845 1907991 . - 0 ID=Thaps416;Parent=Thaps416;rank=2 chr4 . exon 1907845 1907991 . - . ID=Thaps416.2;Parent=Thaps416;constitutive=1;rank=2 chr4 . CDS 1908114 1908291 . - 0 ID=Thaps416;Parent=Thaps416;rank=1 chr4 . exon 1908114 1908291 . - . ID=Thaps416.1;Parent=Thaps416;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1908708 1909973 . - . ID=Thaps4781;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0A0];external_name=Thaps4781;logic_name=jgi_thaps3 chr4 ensembl transcript 1908708 1909973 . - . ID=Thaps4781;Parent=Thaps4781;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1908708 1909973 . - 0 ID=Thaps4781;Parent=Thaps4781;rank=1 chr4 . exon 1908708 1909973 . - . ID=Thaps4781.1;Parent=Thaps4781;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1910281 1911706 . + . ID=Thaps4782;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0A1];external_name=Thaps4782;logic_name=jgi_thaps3 chr4 ensembl transcript 1910281 1911706 . + . ID=Thaps4782;Parent=Thaps4782;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1910281 1910739 . + 0 ID=Thaps4782;Parent=Thaps4782;rank=1 chr4 . exon 1910281 1910739 . + . ID=Thaps4782.1;Parent=Thaps4782;constitutive=1;rank=1 chr4 . CDS 1910821 1911157 . + 0 ID=Thaps4782;Parent=Thaps4782;rank=2 chr4 . exon 1910821 1911157 . + . ID=Thaps4782.2;Parent=Thaps4782;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1911204 1911706 . + 0 ID=Thaps4782;Parent=Thaps4782;rank=3 chr4 . exon 1911204 1911706 . + . ID=Thaps4782.3;Parent=Thaps4782;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1911903 1912505 . - . ID=Thaps4783;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0A2];external_name=Thaps4783;logic_name=jgi_thaps3 chr4 ensembl transcript 1911903 1912505 . - . ID=Thaps4783;Parent=Thaps4783;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1911903 1912505 . - 0 ID=Thaps4783;Parent=Thaps4783;rank=1 chr4 . exon 1911903 1912505 . - . ID=Thaps4783.1;Parent=Thaps4783;constitutive=1;rank=1 chr4 . exon 1914164 1914258 . + . ID=Thaps262296.3;Parent=Thaps262296;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1915424 1916413 . - . ID=Thaps262298;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0A5];external_name=Thaps262298;logic_name=jgi_thaps3 chr4 ensembl transcript 1915424 1916413 . - . ID=Thaps262298;Parent=Thaps262298;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1915424 1915649 . - 0 ID=Thaps262298;Parent=Thaps262298;rank=3 chr4 . exon 1915424 1915649 . - . ID=Thaps262298.3;Parent=Thaps262298;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1915695 1916100 . - 0 ID=Thaps262298;Parent=Thaps262298;rank=2 chr4 . exon 1915695 1916100 . - . ID=Thaps262298.2;Parent=Thaps262298;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1916188 1916413 . - 0 ID=Thaps262298;Parent=Thaps262298;rank=1 chr4 . exon 1916188 1916413 . - . ID=Thaps262298.1;Parent=Thaps262298;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1914792 1915307 . + . ID=Thaps33600;biotype=protein_coding;description=EF hand-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0A4];external_name=Thaps33600;logic_name=jgi_thaps3 chr4 ensembl transcript 1914792 1915307 . + . ID=Thaps33600;Parent=Thaps33600;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1914792 1914938 . + 0 ID=Thaps33600;Parent=Thaps33600;rank=1 chr4 . exon 1914792 1914938 . + . ID=Thaps33600.1;Parent=Thaps33600;constitutive=1;rank=1 chr4 . CDS 1915005 1915307 . + 0 ID=Thaps33600;Parent=Thaps33600;rank=2 chr4 . exon 1915005 1915307 . + . ID=Thaps33600.2;Parent=Thaps33600;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1917960 1918805 . + . ID=Thaps33718;biotype=protein_coding;description=Methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C0A6];external_name=Thaps33718;logic_name=jgi_thaps3 chr4 ensembl transcript 1917960 1918805 . + . ID=Thaps33718;Parent=Thaps33718;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1917960 1918138 . + 0 ID=Thaps33718;Parent=Thaps33718;rank=1 chr4 . exon 1917960 1918138 . + . ID=Thaps33718.1;Parent=Thaps33718;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1918223 1918805 . + 0 ID=Thaps33718;Parent=Thaps33718;rank=2 chr4 . exon 1918223 1918805 . + . ID=Thaps33718.2;Parent=Thaps33718;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1920746 1923738 . - . ID=Thaps33766;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0A7];external_name=Thaps33766;logic_name=jgi_thaps3 chr4 ensembl transcript 1920746 1923738 . - . ID=Thaps33766;Parent=Thaps33766;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1920746 1921038 . - 0 ID=Thaps33766;Parent=Thaps33766;rank=6 chr4 . exon 1920746 1921038 . - . ID=Thaps33766.6;Parent=Thaps33766;constitutive=1;ensembl_end_phase=2;rank=6 chr4 . CDS 1921120 1921555 . - 0 ID=Thaps33766;Parent=Thaps33766;rank=5 chr4 . exon 1921120 1921555 . - . ID=Thaps33766.5;Parent=Thaps33766;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 1921627 1921801 . - 0 ID=Thaps33766;Parent=Thaps33766;rank=4 chr4 . exon 1921627 1921801 . - . ID=Thaps33766.4;Parent=Thaps33766;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 1921931 1922346 . - 0 ID=Thaps33766;Parent=Thaps33766;rank=3 chr4 . exon 1921931 1922346 . - . ID=Thaps33766.3;Parent=Thaps33766;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1922416 1922669 . - 0 ID=Thaps33766;Parent=Thaps33766;rank=2 chr4 . exon 1922416 1922669 . - . ID=Thaps33766.2;Parent=Thaps33766;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1922778 1923738 . - 0 ID=Thaps33766;Parent=Thaps33766;rank=1 chr4 . exon 1922778 1923738 . - . ID=Thaps33766.1;Parent=Thaps33766;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 1924111 1924166 . ? . description=dust chr4 . repeat_region 1925542 1925549 . ? . description=dust chr4 . repeat_region 1928447 1928484 . ? . description=trf chr4 . repeat_region 1928450 1928501 . ? . description=trf chr4 . repeat_region 1928834 1928864 . ? . description=dust chr4 ensembl protein_coding_gene 1926705 1927496 . - . ID=Thaps22424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0A9];external_name=Thaps22424;logic_name=jgi_thaps3 chr4 ensembl transcript 1926705 1927496 . - . ID=Thaps22424;Parent=Thaps22424;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1926705 1927496 . - 0 ID=Thaps22424;Parent=Thaps22424;rank=1 chr4 . exon 1926705 1927496 . - . ID=Thaps22424.1;Parent=Thaps22424;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1927899 1933384 . + . ID=Thaps22425;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0B0];external_name=Thaps22425;logic_name=jgi_thaps3 chr4 ensembl transcript 1927899 1933384 . + . ID=Thaps22425;Parent=Thaps22425;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1927899 1929289 . + 0 ID=Thaps22425;Parent=Thaps22425;rank=1 chr4 . exon 1927899 1929289 . + . ID=Thaps22425.1;Parent=Thaps22425;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1929588 1931007 . + 0 ID=Thaps22425;Parent=Thaps22425;rank=2 chr4 . exon 1929588 1931007 . + . ID=Thaps22425.2;Parent=Thaps22425;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1931094 1931209 . + 0 ID=Thaps22425;Parent=Thaps22425;rank=3 chr4 . exon 1931094 1931209 . + . ID=Thaps22425.3;Parent=Thaps22425;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1931300 1931340 . + 0 ID=Thaps22425;Parent=Thaps22425;rank=4 chr4 . exon 1931300 1931340 . + . ID=Thaps22425.4;Parent=Thaps22425;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1931616 1933384 . + 0 ID=Thaps22425;Parent=Thaps22425;rank=5 chr4 . exon 1931616 1933384 . + . ID=Thaps22425.5;Parent=Thaps22425;constitutive=1;ensembl_end_phase=2;rank=5 chr4 ensembl protein_coding_gene 1933496 1935583 . - . ID=Thaps22426;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0B1];external_name=Thaps22426;logic_name=jgi_thaps3 chr4 ensembl transcript 1933496 1935583 . - . ID=Thaps22426;Parent=Thaps22426;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1933496 1934707 . - 0 ID=Thaps22426;Parent=Thaps22426;rank=4 chr4 . exon 1933496 1934707 . - . ID=Thaps22426.4;Parent=Thaps22426;constitutive=1;rank=4 chr4 . CDS 1934795 1934905 . - 0 ID=Thaps22426;Parent=Thaps22426;rank=3 chr4 . CDS 1934973 1935242 . - 0 ID=Thaps22426;Parent=Thaps22426;rank=2 chr4 . CDS 1935329 1935583 . - 0 ID=Thaps22426;Parent=Thaps22426;rank=1 chr4 ensembl protein_coding_gene 1924804 1926510 . + . ID=Thaps28038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0A8];external_name=Thaps28038;logic_name=jgi_thaps3 chr4 ensembl transcript 1924804 1926510 . + . ID=Thaps28038;Parent=Thaps28038;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1924804 1925521 . + 0 ID=Thaps28038;Parent=Thaps28038;rank=1 chr4 . exon 1924804 1925521 . + . ID=Thaps28038.1;Parent=Thaps28038;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1925604 1926274 . + 0 ID=Thaps28038;Parent=Thaps28038;rank=2 chr4 . exon 1925604 1926274 . + . ID=Thaps28038.2;Parent=Thaps28038;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1926367 1926510 . + 0 ID=Thaps28038;Parent=Thaps28038;rank=3 chr4 . exon 1926367 1926510 . + . ID=Thaps28038.3;Parent=Thaps28038;constitutive=1;rank=3 chr4 . exon 1934795 1934905 . - . ID=Thaps22426.3;Parent=Thaps22426;constitutive=1;rank=3 chr4 . exon 1934973 1935242 . - . ID=Thaps22426.2;Parent=Thaps22426;constitutive=1;rank=2 chr4 . exon 1935329 1935583 . - . ID=Thaps22426.1;Parent=Thaps22426;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1938031 1940364 . + . ID=Thaps22427;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0B3];external_name=Thaps22427;logic_name=jgi_thaps3 chr4 ensembl transcript 1938031 1940364 . + . ID=Thaps22427;Parent=Thaps22427;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1938031 1940364 . + 0 ID=Thaps22427;Parent=Thaps22427;rank=1 chr4 . exon 1938031 1940364 . + . ID=Thaps22427.1;Parent=Thaps22427;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1941252 1941755 . - . ID=Thaps22428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0B4];external_name=Thaps22428;logic_name=jgi_thaps3 chr4 ensembl transcript 1941252 1941755 . - . ID=Thaps22428;Parent=Thaps22428;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1941252 1941755 . - 0 ID=Thaps22428;Parent=Thaps22428;rank=1 chr4 . exon 1941252 1941755 . - . ID=Thaps22428.1;Parent=Thaps22428;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1942785 1945190 . - . ID=Thaps22429;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0B6];external_name=Thaps22429;logic_name=jgi_thaps3 chr4 ensembl transcript 1942785 1945190 . - . ID=Thaps22429;Parent=Thaps22429;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1942785 1945190 . - 0 ID=Thaps22429;Parent=Thaps22429;rank=1 chr4 . exon 1942785 1945190 . - . ID=Thaps22429.1;Parent=Thaps22429;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1936202 1936450 . + . ID=Thaps33353;biotype=protein_coding;external_name=Thaps33353;logic_name=jgi_thaps3 chr4 ensembl transcript 1936202 1936450 . + . ID=Thaps33353;Parent=Thaps33353;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1936202 1936450 . + 0 ID=Thaps33353;Parent=Thaps33353;rank=1 chr4 . exon 1936202 1936450 . + . ID=Thaps33353.1;Parent=Thaps33353;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1937088 1937435 . + . ID=Thaps4793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0B2];external_name=Thaps4793;logic_name=jgi_thaps3 chr4 ensembl transcript 1937088 1937435 . + . ID=Thaps4793;Parent=Thaps4793;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1937088 1937435 . + 0 ID=Thaps4793;Parent=Thaps4793;rank=1 chr4 . exon 1937088 1937435 . + . ID=Thaps4793.1;Parent=Thaps4793;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1942073 1942477 . + . ID=Thaps4796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0B5];external_name=Thaps4796;logic_name=jgi_thaps3 chr4 ensembl transcript 1942073 1942477 . + . ID=Thaps4796;Parent=Thaps4796;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1942073 1942477 . + 0 ID=Thaps4796;Parent=Thaps4796;rank=1 chr4 . exon 1942073 1942477 . + . ID=Thaps4796.1;Parent=Thaps4796;constitutive=1;rank=1 chr4 . repeat_region 1945266 1945309 . ? . description=dust chr4 ensembl snoRNA_gene 1948341 1948440 . + . ID=EPrTPOG00000000108;biotype=snoRNA;description=Small nucleolar RNA SNORD14 [Source:RFAM%3BAcc:RF00016];external_name=SNORD14;logic_name=ncrna_eg chr4 ensembl snoRNA 1948341 1948440 . + . ID=EPrTPOT00000000108;Parent=EPrTPOG00000000108;biotype=snoRNA;logic_name=ncrna_eg chr4 . exon 1948341 1948440 . + . ID=EPrTPOE00000000108;Parent=EPrTPOT00000000108;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1946323 1947053 . - . ID=Thaps22430;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0B7];external_name=Thaps22430;logic_name=jgi_thaps3 chr4 ensembl transcript 1946323 1947053 . - . ID=Thaps22430;Parent=Thaps22430;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1946323 1946853 . - 0 ID=Thaps22430;Parent=Thaps22430;rank=2 chr4 . exon 1946323 1946853 . - . ID=Thaps22430.2;Parent=Thaps22430;constitutive=1;rank=2 chr4 . CDS 1946934 1947053 . - 0 ID=Thaps22430;Parent=Thaps22430;rank=1 chr4 . exon 1946934 1947053 . - . ID=Thaps22430.1;Parent=Thaps22430;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1952606 1954579 . + . ID=Thaps268766;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C0B8];external_name=Thaps268766;logic_name=jgi_thaps3 chr4 ensembl transcript 1952606 1954579 . + . ID=Thaps268766;Parent=Thaps268766;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1952606 1953029 . + 0 ID=Thaps268766;Parent=Thaps268766;rank=1 chr4 . exon 1952606 1953029 . + . ID=Thaps268766.1;Parent=Thaps268766;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1953111 1953794 . + 0 ID=Thaps268766;Parent=Thaps268766;rank=2 chr4 . exon 1953111 1953794 . + . ID=Thaps268766.2;Parent=Thaps268766;constitutive=1;rank=2 chr4 . CDS 1953825 1954579 . + 0 ID=Thaps268766;Parent=Thaps268766;rank=3 chr4 . exon 1953825 1954579 . + . ID=Thaps268766.3;Parent=Thaps268766;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 1957589 1958154 . - . ID=Thaps22432;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0C0];external_name=Thaps22432;logic_name=jgi_thaps3 chr4 ensembl transcript 1957589 1958154 . - . ID=Thaps22432;Parent=Thaps22432;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1957589 1958007 . - 0 ID=Thaps22432;Parent=Thaps22432;rank=2 chr4 . exon 1957589 1958007 . - . ID=Thaps22432.2;Parent=Thaps22432;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1958130 1958154 . - 0 ID=Thaps22432;Parent=Thaps22432;rank=1 chr4 . exon 1958130 1958154 . - . ID=Thaps22432.1;Parent=Thaps22432;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1959164 1961187 . + . ID=Thaps22433;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0C1];external_name=Thaps22433;logic_name=jgi_thaps3 chr4 ensembl transcript 1959164 1961187 . + . ID=Thaps22433;Parent=Thaps22433;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1959164 1960854 . + 0 ID=Thaps22433;Parent=Thaps22433;rank=1 chr4 . exon 1959164 1960854 . + . ID=Thaps22433.1;Parent=Thaps22433;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1960935 1961187 . + 0 ID=Thaps22433;Parent=Thaps22433;rank=2 chr4 . exon 1960935 1961187 . + . ID=Thaps22433.2;Parent=Thaps22433;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1954660 1956270 . - . ID=Thaps4800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0B9];external_name=Thaps4800;logic_name=jgi_thaps3 chr4 ensembl transcript 1954660 1956270 . - . ID=Thaps4800;Parent=Thaps4800;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1954660 1956270 . - 0 ID=Thaps4800;Parent=Thaps4800;rank=1 chr4 . exon 1954660 1956270 . - . ID=Thaps4800.1;Parent=Thaps4800;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1961616 1962611 . - . ID=Thaps4803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0C2];external_name=Thaps4803;logic_name=jgi_thaps3 chr4 ensembl transcript 1961616 1962611 . - . ID=Thaps4803;Parent=Thaps4803;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1961616 1962611 . - 0 ID=Thaps4803;Parent=Thaps4803;rank=1 chr4 . exon 1961616 1962611 . - . ID=Thaps4803.1;Parent=Thaps4803;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1962858 1963856 . + . ID=Thaps4804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0C3];external_name=Thaps4804;logic_name=jgi_thaps3 chr4 ensembl transcript 1962858 1963856 . + . ID=Thaps4804;Parent=Thaps4804;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1962858 1963856 . + 0 ID=Thaps4804;Parent=Thaps4804;rank=1 chr4 . exon 1962858 1963856 . + . ID=Thaps4804.1;Parent=Thaps4804;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1965052 1967701 . - . ID=Thaps262303;biotype=protein_coding;description=UVRD/Rep like helicase [Source:UniProtKB/TrEMBL%3BAcc:B8C0C4];external_name=HELICASE_2;logic_name=jgi_thaps3 chr4 ensembl transcript 1965052 1967701 . - . ID=Thaps262303;Parent=Thaps262303;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1965052 1965919 . - 0 ID=Thaps262303;Parent=Thaps262303;rank=5 chr4 . exon 1965052 1965919 . - . ID=Thaps262303.5;Parent=Thaps262303;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 1966099 1966230 . - 0 ID=Thaps262303;Parent=Thaps262303;rank=4 chr4 . exon 1966099 1966230 . - . ID=Thaps262303.4;Parent=Thaps262303;constitutive=1;rank=4 chr4 . CDS 1966339 1966931 . - 0 ID=Thaps262303;Parent=Thaps262303;rank=3 chr4 . exon 1966339 1966931 . - . ID=Thaps262303.3;Parent=Thaps262303;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1967070 1967120 . - 0 ID=Thaps262303;Parent=Thaps262303;rank=2 chr4 . exon 1967070 1967120 . - . ID=Thaps262303.2;Parent=Thaps262303;constitutive=1;rank=2 chr4 . CDS 1967250 1967701 . - 0 ID=Thaps262303;Parent=Thaps262303;rank=1 chr4 . exon 1967250 1967701 . - . ID=Thaps262303.1;Parent=Thaps262303;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 1968610 1969350 . + . ID=Thaps40473;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0C5];external_name=Thaps40473;logic_name=jgi_thaps3 chr4 ensembl transcript 1968610 1969350 . + . ID=Thaps40473;Parent=Thaps40473;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1968610 1968833 . + 0 ID=Thaps40473;Parent=Thaps40473;rank=1 chr4 . exon 1968610 1968833 . + . ID=Thaps40473.1;Parent=Thaps40473;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 1968918 1969350 . + 0 ID=Thaps40473;Parent=Thaps40473;rank=2 chr4 . exon 1968918 1969350 . + . ID=Thaps40473.2;Parent=Thaps40473;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 1969566 1970591 . - . ID=Thaps4807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0C6];external_name=Thaps4807;logic_name=jgi_thaps3 chr4 ensembl transcript 1969566 1970591 . - . ID=Thaps4807;Parent=Thaps4807;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1969566 1970591 . - 0 ID=Thaps4807;Parent=Thaps4807;rank=1 chr4 . exon 1969566 1970591 . - . ID=Thaps4807.1;Parent=Thaps4807;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1971012 1974275 . - . ID=Thaps4808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0C7];external_name=Thaps4808;logic_name=jgi_thaps3 chr4 ensembl transcript 1971012 1974275 . - . ID=Thaps4808;Parent=Thaps4808;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1971012 1974275 . - 0 ID=Thaps4808;Parent=Thaps4808;rank=1 chr4 . exon 1971012 1974275 . - . ID=Thaps4808.1;Parent=Thaps4808;constitutive=1;rank=1 chr4 . repeat_region 1974158 1974182 . ? . description=trf chr4 . repeat_region 1974158 1974182 . ? . description=dust chr4 . repeat_region 1975794 1975801 . ? . description=dust chr4 . repeat_region 1983329 1983358 . ? . description=trf chr4 . repeat_region 1983772 1983856 . ? . description=trf chr4 . repeat_region 1983772 1983856 . ? . description=dust chr4 . repeat_region 1983797 1983856 . ? . description=trf chr4 ensembl protein_coding_gene 1977892 1980242 . - . ID=Thaps22437;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0C9];external_name=Thaps22437;logic_name=jgi_thaps3 chr4 ensembl transcript 1977892 1980242 . - . ID=Thaps22437;Parent=Thaps22437;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1977892 1977980 . - 0 ID=Thaps22437;Parent=Thaps22437;rank=3 chr4 . exon 1977892 1977980 . - . ID=Thaps22437.3;Parent=Thaps22437;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 1978066 1978333 . - 0 ID=Thaps22437;Parent=Thaps22437;rank=2 chr4 . exon 1978066 1978333 . - . ID=Thaps22437.2;Parent=Thaps22437;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1978422 1980242 . - 0 ID=Thaps22437;Parent=Thaps22437;rank=1 chr4 . exon 1978422 1980242 . - . ID=Thaps22437.1;Parent=Thaps22437;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1981735 1983032 . - . ID=Thaps262305;biotype=protein_coding;description=Dnaj-like protein subfamily B member 1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0D1];external_name=Thaps262305;logic_name=jgi_thaps3 chr4 ensembl transcript 1981735 1983032 . - . ID=Thaps262305;Parent=Thaps262305;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1981735 1981741 . - 0 ID=Thaps262305;Parent=Thaps262305;rank=3 chr4 . exon 1981735 1981741 . - . ID=Thaps262305.3;Parent=Thaps262305;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1981839 1982476 . - 0 ID=Thaps262305;Parent=Thaps262305;rank=2 chr4 . exon 1981839 1982476 . - . ID=Thaps262305.2;Parent=Thaps262305;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1982636 1983032 . - 0 ID=Thaps262305;Parent=Thaps262305;rank=1 chr4 . exon 1982636 1983032 . - . ID=Thaps262305.1;Parent=Thaps262305;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1980619 1981551 . + . ID=Thaps33725;biotype=protein_coding;description=26S proteasome regulatory subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C0D0];external_name=RPN11;logic_name=jgi_thaps3 chr4 ensembl transcript 1980619 1981551 . + . ID=Thaps33725;Parent=Thaps33725;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1980619 1981551 . + 0 ID=Thaps33725;Parent=Thaps33725;rank=1 chr4 . exon 1980619 1981551 . + . ID=Thaps33725.1;Parent=Thaps33725;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1977137 1977710 . + . ID=Thaps33772;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0C8];external_name=Thaps33772;logic_name=jgi_thaps3 chr4 ensembl transcript 1977137 1977710 . + . ID=Thaps33772;Parent=Thaps33772;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1977137 1977229 . + 0 ID=Thaps33772;Parent=Thaps33772;rank=1 chr4 . exon 1977137 1977229 . + . ID=Thaps33772.1;Parent=Thaps33772;constitutive=1;rank=1 chr4 . CDS 1977318 1977710 . + 0 ID=Thaps33772;Parent=Thaps33772;rank=2 chr4 . exon 1977318 1977710 . + . ID=Thaps33772.2;Parent=Thaps33772;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1983595 1987896 . + . ID=Thaps4813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0D2];external_name=Thaps4813;logic_name=jgi_thaps3 chr4 ensembl transcript 1983595 1987896 . + . ID=Thaps4813;Parent=Thaps4813;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1983595 1987896 . + 0 ID=Thaps4813;Parent=Thaps4813;rank=1 chr4 . exon 1983595 1987896 . + . ID=Thaps4813.1;Parent=Thaps4813;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1990513 1991325 . + . ID=Thaps28049;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0D4];external_name=Thaps28049;logic_name=jgi_thaps3 chr4 ensembl transcript 1990513 1991325 . + . ID=Thaps28049;Parent=Thaps28049;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1990513 1991325 . + 0 ID=Thaps28049;Parent=Thaps28049;rank=1 chr4 . exon 1990513 1991325 . + . ID=Thaps28049.1;Parent=Thaps28049;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 1988060 1989268 . - . ID=Thaps4814;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0D3];external_name=Thaps4814;logic_name=jgi_thaps3 chr4 ensembl transcript 1988060 1989268 . - . ID=Thaps4814;Parent=Thaps4814;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1988060 1988673 . - 0 ID=Thaps4814;Parent=Thaps4814;rank=2 chr4 . exon 1988060 1988673 . - . ID=Thaps4814.2;Parent=Thaps4814;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 1988770 1989268 . - 0 ID=Thaps4814;Parent=Thaps4814;rank=1 chr4 . exon 1988770 1989268 . - . ID=Thaps4814.1;Parent=Thaps4814;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 1991752 1996468 . + . ID=Thaps4816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0D5];external_name=Thaps4816;logic_name=jgi_thaps3 chr4 ensembl transcript 1991752 1996468 . + . ID=Thaps4816;Parent=Thaps4816;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1991752 1995714 . + 0 ID=Thaps4816;Parent=Thaps4816;rank=1 chr4 . exon 1991752 1995714 . + . ID=Thaps4816.1;Parent=Thaps4816;constitutive=1;rank=1 chr4 . CDS 1995794 1996468 . + 0 ID=Thaps4816;Parent=Thaps4816;rank=2 chr4 . biological_region 1997931 1997933 0.999 + . logic_name=eponine chr4 . repeat_region 1998553 1998567 . ? . description=dust chr4 ensembl protein_coding_gene 1996612 1998538 . - . ID=Thaps33432;biotype=protein_coding;description=The t-complex beta chaperonin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0D6];external_name=Thaps33432;logic_name=jgi_thaps3 chr4 ensembl transcript 1996612 1998538 . - . ID=Thaps33432;Parent=Thaps33432;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1996612 1996655 . - 0 ID=Thaps33432;Parent=Thaps33432;rank=4 chr4 . exon 1996612 1996655 . - . ID=Thaps33432.4;Parent=Thaps33432;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 1996726 1997464 . - 0 ID=Thaps33432;Parent=Thaps33432;rank=3 chr4 . exon 1996726 1997464 . - . ID=Thaps33432.3;Parent=Thaps33432;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 1997564 1998050 . - 0 ID=Thaps33432;Parent=Thaps33432;rank=2 chr4 . exon 1997564 1998050 . - . ID=Thaps33432.2;Parent=Thaps33432;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 1998264 1998538 . - 0 ID=Thaps33432;Parent=Thaps33432;rank=1 chr4 . exon 1998264 1998538 . - . ID=Thaps33432.1;Parent=Thaps33432;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . exon 1995794 1996468 . + . ID=Thaps4816.2;Parent=Thaps4816;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 1998869 2002157 . + . ID=Thaps4818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0D7];external_name=Thaps4818;logic_name=jgi_thaps3 chr4 ensembl transcript 1998869 2002157 . + . ID=Thaps4818;Parent=Thaps4818;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 1998869 1999883 . + 0 ID=Thaps4818;Parent=Thaps4818;rank=1 chr4 . exon 1998869 1999883 . + . ID=Thaps4818.1;Parent=Thaps4818;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 1999956 2000021 . + 0 ID=Thaps4818;Parent=Thaps4818;rank=2 chr4 . exon 1999956 2000021 . + . ID=Thaps4818.2;Parent=Thaps4818;constitutive=1;rank=2 chr4 . CDS 2000097 2000618 . + 0 ID=Thaps4818;Parent=Thaps4818;rank=3 chr4 . exon 2000097 2000618 . + . ID=Thaps4818.3;Parent=Thaps4818;constitutive=1;rank=3 chr4 . CDS 2000837 2001157 . + 0 ID=Thaps4818;Parent=Thaps4818;rank=4 chr4 . exon 2000837 2001157 . + . ID=Thaps4818.4;Parent=Thaps4818;constitutive=1;rank=4 chr4 . CDS 2001231 2001629 . + 0 ID=Thaps4818;Parent=Thaps4818;rank=5 chr4 . exon 2001231 2001629 . + . ID=Thaps4818.5;Parent=Thaps4818;constitutive=1;rank=5 chr4 . CDS 2001704 2001972 . + 0 ID=Thaps4818;Parent=Thaps4818;rank=6 chr4 . exon 2001704 2001972 . + . ID=Thaps4818.6;Parent=Thaps4818;constitutive=1;ensembl_end_phase=2;rank=6 chr4 . CDS 2002044 2002157 . + 0 ID=Thaps4818;Parent=Thaps4818;rank=7 chr4 . exon 2002044 2002157 . + . ID=Thaps4818.7;Parent=Thaps4818;constitutive=1;rank=7 chr4 ensembl protein_coding_gene 2002825 2004095 . - . ID=Thaps4819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0D8];external_name=Thaps4819;logic_name=jgi_thaps3 chr4 ensembl transcript 2002825 2004095 . - . ID=Thaps4819;Parent=Thaps4819;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2002825 2003639 . - 0 ID=Thaps4819;Parent=Thaps4819;rank=2 chr4 . exon 2002825 2003639 . - . ID=Thaps4819.2;Parent=Thaps4819;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2003738 2004095 . - 0 ID=Thaps4819;Parent=Thaps4819;rank=1 chr4 . exon 2003738 2004095 . - . ID=Thaps4819.1;Parent=Thaps4819;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 2009085 2009108 . ? . description=trf chr4 ensembl protein_coding_gene 2013229 2014774 . - . ID=Thaps22441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0E2];external_name=Thaps22441;logic_name=jgi_thaps3 chr4 ensembl transcript 2013229 2014774 . - . ID=Thaps22441;Parent=Thaps22441;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2013229 2013713 . - 0 ID=Thaps22441;Parent=Thaps22441;rank=3 chr4 . exon 2013229 2013713 . - . ID=Thaps22441.3;Parent=Thaps22441;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2013780 2014461 . - 0 ID=Thaps22441;Parent=Thaps22441;rank=2 chr4 . CDS 2014583 2014774 . - 0 ID=Thaps22441;Parent=Thaps22441;rank=1 chr4 ensembl protein_coding_gene 2009695 2011092 . + . ID=Thaps262307;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0E1];external_name=Thaps262307;logic_name=jgi_thaps3 chr4 ensembl transcript 2009695 2011092 . + . ID=Thaps262307;Parent=Thaps262307;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2009695 2009836 . + 0 ID=Thaps262307;Parent=Thaps262307;rank=1 chr4 . exon 2009695 2009836 . + . ID=Thaps262307.1;Parent=Thaps262307;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2009924 2010022 . + 0 ID=Thaps262307;Parent=Thaps262307;rank=2 chr4 . exon 2009924 2010022 . + . ID=Thaps262307.2;Parent=Thaps262307;constitutive=1;rank=2 chr4 . CDS 2010133 2010189 . + 0 ID=Thaps262307;Parent=Thaps262307;rank=3 chr4 . exon 2010133 2010189 . + . ID=Thaps262307.3;Parent=Thaps262307;constitutive=1;rank=3 chr4 . CDS 2010285 2011092 . + 0 ID=Thaps262307;Parent=Thaps262307;rank=4 chr4 . exon 2010285 2011092 . + . ID=Thaps262307.4;Parent=Thaps262307;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 2004595 2005934 . + . ID=Thaps4820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0D9];external_name=Thaps4820;logic_name=jgi_thaps3 chr4 ensembl transcript 2004595 2005934 . + . ID=Thaps4820;Parent=Thaps4820;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2004595 2005084 . + 0 ID=Thaps4820;Parent=Thaps4820;rank=1 chr4 . exon 2004595 2005084 . + . ID=Thaps4820.1;Parent=Thaps4820;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2005198 2005934 . + 0 ID=Thaps4820;Parent=Thaps4820;rank=2 chr4 . exon 2005198 2005934 . + . ID=Thaps4820.2;Parent=Thaps4820;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 2006810 2008255 . + . ID=Thaps4821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0E0];external_name=Thaps4821;logic_name=jgi_thaps3 chr4 ensembl transcript 2006810 2008255 . + . ID=Thaps4821;Parent=Thaps4821;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2006810 2007378 . + 0 ID=Thaps4821;Parent=Thaps4821;rank=1 chr4 . exon 2006810 2007378 . + . ID=Thaps4821.1;Parent=Thaps4821;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 2007463 2008255 . + 0 ID=Thaps4821;Parent=Thaps4821;rank=2 chr4 . exon 2007463 2008255 . + . ID=Thaps4821.2;Parent=Thaps4821;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 2013780 2014461 . - . ID=Thaps22441.2;Parent=Thaps22441;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 2014583 2014774 . - . ID=Thaps22441.1;Parent=Thaps22441;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2017462 2023009 . + . ID=Thaps22442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0E5];external_name=Thaps22442;logic_name=jgi_thaps3 chr4 ensembl transcript 2017462 2023009 . + . ID=Thaps22442;Parent=Thaps22442;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2017462 2017572 . + 0 ID=Thaps22442;Parent=Thaps22442;rank=1 chr4 . exon 2017462 2017572 . + . ID=Thaps22442.1;Parent=Thaps22442;constitutive=1;rank=1 chr4 . CDS 2017606 2020007 . + 0 ID=Thaps22442;Parent=Thaps22442;rank=2 chr4 . exon 2017606 2020007 . + . ID=Thaps22442.2;Parent=Thaps22442;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2020103 2020901 . + 0 ID=Thaps22442;Parent=Thaps22442;rank=3 chr4 . exon 2020103 2020901 . + . ID=Thaps22442.3;Parent=Thaps22442;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2020999 2021704 . + 0 ID=Thaps22442;Parent=Thaps22442;rank=4 chr4 . exon 2020999 2021704 . + . ID=Thaps22442.4;Parent=Thaps22442;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 2021787 2021926 . + 0 ID=Thaps22442;Parent=Thaps22442;rank=5 chr4 . exon 2021787 2021926 . + . ID=Thaps22442.5;Parent=Thaps22442;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 2022023 2023009 . + 0 ID=Thaps22442;Parent=Thaps22442;rank=6 chr4 . exon 2022023 2023009 . + . ID=Thaps22442.6;Parent=Thaps22442;constitutive=1;rank=6 chr4 ensembl protein_coding_gene 2023056 2024810 . - . ID=Thaps22443;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0E6];external_name=Thaps22443;logic_name=jgi_thaps3 chr4 ensembl transcript 2023056 2024810 . - . ID=Thaps22443;Parent=Thaps22443;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2023056 2024810 . - 0 ID=Thaps22443;Parent=Thaps22443;rank=1 chr4 . exon 2023056 2024810 . - . ID=Thaps22443.1;Parent=Thaps22443;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2015105 2015584 . + . ID=Thaps4824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0E3];external_name=Thaps4824;logic_name=jgi_thaps3 chr4 ensembl transcript 2015105 2015584 . + . ID=Thaps4824;Parent=Thaps4824;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2015105 2015584 . + 0 ID=Thaps4824;Parent=Thaps4824;rank=1 chr4 . exon 2015105 2015584 . + . ID=Thaps4824.1;Parent=Thaps4824;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2015986 2017214 . - . ID=Thaps4825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0E4];external_name=Thaps4825;logic_name=jgi_thaps3 chr4 ensembl transcript 2015986 2017214 . - . ID=Thaps4825;Parent=Thaps4825;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2015986 2016386 . - 0 ID=Thaps4825;Parent=Thaps4825;rank=3 chr4 . exon 2015986 2016386 . - . ID=Thaps4825.3;Parent=Thaps4825;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2016474 2016516 . - 0 ID=Thaps4825;Parent=Thaps4825;rank=2 chr4 . exon 2016474 2016516 . - . ID=Thaps4825.2;Parent=Thaps4825;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2016585 2017214 . - 0 ID=Thaps4825;Parent=Thaps4825;rank=1 chr4 . exon 2016585 2017214 . - . ID=Thaps4825.1;Parent=Thaps4825;constitutive=1;rank=1 chr4 . repeat_region 2024092 2024126 . ? . description=trf chr4 . repeat_region 2024096 2024129 . ? . description=dust chr4 . repeat_region 2024598 2024632 . ? . description=dust chr4 . repeat_region 2024599 2024634 . ? . description=trf chr4 . repeat_region 2024847 2024855 . ? . description=dust chr4 . repeat_region 2025219 2025234 . ? . description=dust chr4 . repeat_region 2025339 2025420 . ? . description=dust chr4 ensembl protein_coding_gene 2028965 2030595 . + . ID=Thaps268773;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0F0];external_name=Thaps268773;logic_name=jgi_thaps3 chr4 ensembl transcript 2028965 2030595 . + . ID=Thaps268773;Parent=Thaps268773;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2028965 2029142 . + 0 ID=Thaps268773;Parent=Thaps268773;rank=1 chr4 . exon 2028965 2029142 . + . ID=Thaps268773.1;Parent=Thaps268773;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2029226 2029582 . + 0 ID=Thaps268773;Parent=Thaps268773;rank=2 chr4 . exon 2029226 2029582 . + . ID=Thaps268773.2;Parent=Thaps268773;constitutive=1;rank=2 chr4 . CDS 2029628 2030595 . + 0 ID=Thaps268773;Parent=Thaps268773;rank=3 chr4 . exon 2029628 2030595 . + . ID=Thaps268773.3;Parent=Thaps268773;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 2025015 2026031 . + . ID=Thaps40483;biotype=protein_coding;description=Proteasome subunit alpha type [Source:UniProtKB/TrEMBL%3BAcc:B8C0E7];external_name=PSA4;logic_name=jgi_thaps3 chr4 ensembl transcript 2025015 2026031 . + . ID=Thaps40483;Parent=Thaps40483;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2025015 2025194 . + 0 ID=Thaps40483;Parent=Thaps40483;rank=1 chr4 . exon 2025015 2025194 . + . ID=Thaps40483.1;Parent=Thaps40483;constitutive=1;rank=1 chr4 . CDS 2025399 2026031 . + 0 ID=Thaps40483;Parent=Thaps40483;rank=2 chr4 . exon 2025399 2026031 . + . ID=Thaps40483.2;Parent=Thaps40483;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 2030796 2031758 . - . ID=Thaps40489;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0F1];external_name=Thaps40489;logic_name=jgi_thaps3 chr4 ensembl transcript 2030796 2031758 . - . ID=Thaps40489;Parent=Thaps40489;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2030796 2031758 . - 0 ID=Thaps40489;Parent=Thaps40489;rank=1 chr4 . exon 2030796 2031758 . - . ID=Thaps40489.1;Parent=Thaps40489;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2026519 2027496 . + . ID=Thaps4829;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0E8];external_name=Thaps4829;logic_name=jgi_thaps3 chr4 ensembl transcript 2026519 2027496 . + . ID=Thaps4829;Parent=Thaps4829;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2026519 2027496 . + 0 ID=Thaps4829;Parent=Thaps4829;rank=1 chr4 . exon 2026519 2027496 . + . ID=Thaps4829.1;Parent=Thaps4829;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2027866 2028666 . - . ID=Thaps4830;biotype=protein_coding;description=The actin binding protein cofilin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0E9];external_name=Thaps4830;logic_name=jgi_thaps3 chr4 ensembl transcript 2027866 2028666 . - . ID=Thaps4830;Parent=Thaps4830;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2027866 2028291 . - 0 ID=Thaps4830;Parent=Thaps4830;rank=2 chr4 . exon 2027866 2028291 . - . ID=Thaps4830.2;Parent=Thaps4830;constitutive=1;rank=2 chr4 . CDS 2028664 2028666 . - 0 ID=Thaps4830;Parent=Thaps4830;rank=1 chr4 . exon 2028664 2028666 . - . ID=Thaps4830.1;Parent=Thaps4830;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2035946 2036521 . + . ID=Thaps17859;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0F2];external_name=Thaps17859;logic_name=jgi_thaps3 chr4 ensembl transcript 2035946 2036521 . + . ID=Thaps17859;Parent=Thaps17859;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2035946 2036311 . + 0 ID=Thaps17859;Parent=Thaps17859;rank=1 chr4 . exon 2035946 2036311 . + . ID=Thaps17859.1;Parent=Thaps17859;constitutive=1;rank=1 chr4 . CDS 2036396 2036521 . + 0 ID=Thaps17859;Parent=Thaps17859;rank=2 chr4 . exon 2036396 2036521 . + . ID=Thaps17859.2;Parent=Thaps17859;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 2037727 2040212 . + . ID=Thaps22448;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0F4];external_name=Thaps22448;logic_name=jgi_thaps3 chr4 ensembl transcript 2037727 2040212 . + . ID=Thaps22448;Parent=Thaps22448;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2037727 2039729 . + 0 ID=Thaps22448;Parent=Thaps22448;rank=1 chr4 . exon 2037727 2039729 . + . ID=Thaps22448.1;Parent=Thaps22448;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 2039813 2040212 . + 0 ID=Thaps22448;Parent=Thaps22448;rank=2 chr4 . exon 2039813 2040212 . + . ID=Thaps22448.2;Parent=Thaps22448;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 2040256 2042634 . - . ID=Thaps22449;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0F5];external_name=Thaps22449;logic_name=jgi_thaps3 chr4 ensembl transcript 2040256 2042634 . - . ID=Thaps22449;Parent=Thaps22449;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2040256 2042634 . - 0 ID=Thaps22449;Parent=Thaps22449;rank=1 chr4 . exon 2040256 2042634 . - . ID=Thaps22449.1;Parent=Thaps22449;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2043005 2044894 . + . ID=Thaps22450;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0F6];external_name=Thaps22450;logic_name=jgi_thaps3 chr4 ensembl transcript 2043005 2044894 . + . ID=Thaps22450;Parent=Thaps22450;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2043005 2044894 . + 0 ID=Thaps22450;Parent=Thaps22450;rank=1 chr4 . exon 2043005 2044894 . + . ID=Thaps22450.1;Parent=Thaps22450;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2036849 2037427 . - . ID=Thaps4834;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0F3];external_name=Thaps4834;logic_name=jgi_thaps3 chr4 ensembl transcript 2036849 2037427 . - . ID=Thaps4834;Parent=Thaps4834;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2036849 2037427 . - 0 ID=Thaps4834;Parent=Thaps4834;rank=1 chr4 . exon 2036849 2037427 . - . ID=Thaps4834.1;Parent=Thaps4834;constitutive=1;rank=1 chr4 . repeat_region 2046456 2046491 . ? . description=trf chr4 . repeat_region 2047825 2047849 . ? . description=trf chr4 . repeat_region 2047825 2047863 . ? . description=dust chr4 . repeat_region 2053372 2053379 . ? . description=dust chr4 ensembl protein_coding_gene 2045129 2047455 . - . ID=Thaps22451;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0F7];external_name=Thaps22451;logic_name=jgi_thaps3 chr4 ensembl transcript 2045129 2047455 . - . ID=Thaps22451;Parent=Thaps22451;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2045129 2046440 . - 0 ID=Thaps22451;Parent=Thaps22451;rank=3 chr4 . exon 2045129 2046440 . - . ID=Thaps22451.3;Parent=Thaps22451;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2046526 2047164 . - 0 ID=Thaps22451;Parent=Thaps22451;rank=2 chr4 . exon 2046526 2047164 . - . ID=Thaps22451.2;Parent=Thaps22451;constitutive=1;rank=2 chr4 . CDS 2047280 2047455 . - 0 ID=Thaps22451;Parent=Thaps22451;rank=1 chr4 . exon 2047280 2047455 . - . ID=Thaps22451.1;Parent=Thaps22451;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 2053536 2055264 . + . ID=Thaps262312;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0F9];external_name=Thaps262312;logic_name=jgi_thaps3 chr4 ensembl transcript 2053536 2055264 . + . ID=Thaps262312;Parent=Thaps262312;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2053536 2053601 . + 0 ID=Thaps262312;Parent=Thaps262312;rank=1 chr4 . exon 2053536 2053601 . + . ID=Thaps262312.1;Parent=Thaps262312;constitutive=1;rank=1 chr4 . CDS 2053678 2053727 . + 0 ID=Thaps262312;Parent=Thaps262312;rank=2 chr4 . CDS 2053782 2053877 . + 0 ID=Thaps262312;Parent=Thaps262312;rank=3 chr4 . CDS 2053958 2054093 . + 0 ID=Thaps262312;Parent=Thaps262312;rank=4 chr4 . CDS 2054167 2054215 . + 0 ID=Thaps262312;Parent=Thaps262312;rank=5 chr4 . CDS 2054303 2054558 . + 0 ID=Thaps262312;Parent=Thaps262312;rank=6 chr4 . CDS 2054645 2055264 . + 0 ID=Thaps262312;Parent=Thaps262312;rank=7 chr4 ensembl protein_coding_gene 2048291 2052158 . + . ID=Thaps33580;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C0F8];external_name=Thaps33580;logic_name=jgi_thaps3 chr4 ensembl transcript 2048291 2052158 . + . ID=Thaps33580;Parent=Thaps33580;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2048291 2049076 . + 0 ID=Thaps33580;Parent=Thaps33580;rank=1 chr4 . exon 2048291 2049076 . + . ID=Thaps33580.1;Parent=Thaps33580;constitutive=1;rank=1 chr4 . CDS 2049239 2049598 . + 0 ID=Thaps33580;Parent=Thaps33580;rank=2 chr4 . exon 2049239 2049598 . + . ID=Thaps33580.2;Parent=Thaps33580;constitutive=1;rank=2 chr4 . CDS 2049688 2049713 . + 0 ID=Thaps33580;Parent=Thaps33580;rank=3 chr4 . exon 2049688 2049713 . + . ID=Thaps33580.3;Parent=Thaps33580;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2049790 2051409 . + 0 ID=Thaps33580;Parent=Thaps33580;rank=4 chr4 . exon 2049790 2051409 . + . ID=Thaps33580.4;Parent=Thaps33580;constitutive=1;rank=4 chr4 . CDS 2051495 2052158 . + 0 ID=Thaps33580;Parent=Thaps33580;rank=5 chr4 . exon 2051495 2052158 . + . ID=Thaps33580.5;Parent=Thaps33580;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . exon 2053678 2053727 . + . ID=Thaps262312.2;Parent=Thaps262312;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . exon 2053782 2053877 . + . ID=Thaps262312.3;Parent=Thaps262312;constitutive=1;rank=3 chr4 . exon 2053958 2054093 . + . ID=Thaps262312.4;Parent=Thaps262312;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . exon 2054167 2054215 . + . ID=Thaps262312.5;Parent=Thaps262312;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . exon 2054303 2054558 . + . ID=Thaps262312.6;Parent=Thaps262312;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . exon 2054645 2055264 . + . ID=Thaps262312.7;Parent=Thaps262312;constitutive=1;ensembl_end_phase=2;rank=7 chr4 ensembl protein_coding_gene 2059580 2060377 . + . ID=Thaps262313;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0G1];external_name=FCP2;logic_name=jgi_thaps3 chr4 ensembl transcript 2059580 2060377 . + . ID=Thaps262313;Parent=Thaps262313;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2059580 2059757 . + 0 ID=Thaps262313;Parent=Thaps262313;rank=1 chr4 . exon 2059580 2059757 . + . ID=Thaps262313.1;Parent=Thaps262313;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2059835 2059934 . + 0 ID=Thaps262313;Parent=Thaps262313;rank=2 chr4 . exon 2059835 2059934 . + . ID=Thaps262313.2;Parent=Thaps262313;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2060192 2060377 . + 0 ID=Thaps262313;Parent=Thaps262313;rank=3 chr4 . exon 2060192 2060377 . + . ID=Thaps262313.3;Parent=Thaps262313;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 2055408 2059387 . - . ID=Thaps4842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0G0];external_name=Thaps4842;logic_name=jgi_thaps3 chr4 ensembl transcript 2055408 2059387 . - . ID=Thaps4842;Parent=Thaps4842;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2055408 2057371 . - 0 ID=Thaps4842;Parent=Thaps4842;rank=5 chr4 . exon 2055408 2057371 . - . ID=Thaps4842.5;Parent=Thaps4842;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 2057402 2057516 . - 0 ID=Thaps4842;Parent=Thaps4842;rank=4 chr4 . exon 2057402 2057516 . - . ID=Thaps4842.4;Parent=Thaps4842;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 2057608 2058657 . - 0 ID=Thaps4842;Parent=Thaps4842;rank=3 chr4 . exon 2057608 2058657 . - . ID=Thaps4842.3;Parent=Thaps4842;constitutive=1;rank=3 chr4 . CDS 2058842 2059047 . - 0 ID=Thaps4842;Parent=Thaps4842;rank=2 chr4 . exon 2058842 2059047 . - . ID=Thaps4842.2;Parent=Thaps4842;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2059207 2059387 . - 0 ID=Thaps4842;Parent=Thaps4842;rank=1 chr4 . exon 2059207 2059387 . - . ID=Thaps4842.1;Parent=Thaps4842;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2060703 2061338 . - . ID=Thaps4844;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0G2];external_name=Thaps4844;logic_name=jgi_thaps3 chr4 ensembl transcript 2060703 2061338 . - . ID=Thaps4844;Parent=Thaps4844;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2060703 2061338 . - 0 ID=Thaps4844;Parent=Thaps4844;rank=1 chr4 . exon 2060703 2061338 . - . ID=Thaps4844.1;Parent=Thaps4844;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2063225 2064184 . + . ID=Thaps4845;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0G3];external_name=Thaps4845;logic_name=jgi_thaps3 chr4 ensembl transcript 2063225 2064184 . + . ID=Thaps4845;Parent=Thaps4845;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2063225 2064184 . + 0 ID=Thaps4845;Parent=Thaps4845;rank=1 chr4 . exon 2063225 2064184 . + . ID=Thaps4845.1;Parent=Thaps4845;constitutive=1;rank=1 chr4 . repeat_region 2066933 2066953 . ? . description=trf chr4 . repeat_region 2066933 2066953 . ? . description=dust chr4 ensembl protein_coding_gene 2064416 2065807 . - . ID=Thaps22454;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0G4];external_name=Thaps22454;logic_name=jgi_thaps3 chr4 ensembl transcript 2064416 2065807 . - . ID=Thaps22454;Parent=Thaps22454;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2064416 2065807 . - 0 ID=Thaps22454;Parent=Thaps22454;rank=1 chr4 . exon 2064416 2065807 . - . ID=Thaps22454.1;Parent=Thaps22454;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2066527 2070721 . + . ID=Thaps22455;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0G5];external_name=Thaps22455;logic_name=jgi_thaps3 chr4 ensembl transcript 2066527 2070721 . + . ID=Thaps22455;Parent=Thaps22455;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2066527 2067406 . + 0 ID=Thaps22455;Parent=Thaps22455;rank=1 chr4 . exon 2066527 2067406 . + . ID=Thaps22455.1;Parent=Thaps22455;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2067491 2068324 . + 0 ID=Thaps22455;Parent=Thaps22455;rank=2 chr4 . exon 2067491 2068324 . + . ID=Thaps22455.2;Parent=Thaps22455;constitutive=1;rank=2 chr4 . CDS 2068424 2068701 . + 0 ID=Thaps22455;Parent=Thaps22455;rank=3 chr4 . exon 2068424 2068701 . + . ID=Thaps22455.3;Parent=Thaps22455;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2068778 2069531 . + 0 ID=Thaps22455;Parent=Thaps22455;rank=4 chr4 . exon 2068778 2069531 . + . ID=Thaps22455.4;Parent=Thaps22455;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 2069602 2070062 . + 0 ID=Thaps22455;Parent=Thaps22455;rank=5 chr4 . exon 2069602 2070062 . + . ID=Thaps22455.5;Parent=Thaps22455;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 2070149 2070721 . + 0 ID=Thaps22455;Parent=Thaps22455;rank=6 chr4 . exon 2070149 2070721 . + . ID=Thaps22455.6;Parent=Thaps22455;constitutive=1;rank=6 chr4 ensembl protein_coding_gene 2073255 2075387 . - . ID=Thaps40496;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0G6];external_name=Thaps40496;logic_name=jgi_thaps3 chr4 ensembl transcript 2073255 2075387 . - . ID=Thaps40496;Parent=Thaps40496;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2073255 2075387 . - 0 ID=Thaps40496;Parent=Thaps40496;rank=1 chr4 . exon 2073255 2075387 . - . ID=Thaps40496.1;Parent=Thaps40496;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2082843 2085245 . - . ID=Thaps12810;biotype=protein_coding;description=Importin beta-1 subunit-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0H0];external_name=Thaps12810;logic_name=jgi_thaps3 chr4 ensembl transcript 2082843 2085245 . - . ID=Thaps12810;Parent=Thaps12810;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2082843 2085245 . - 0 ID=Thaps12810;Parent=Thaps12810;rank=1 chr4 . exon 2082843 2085245 . - . ID=Thaps12810.1;Parent=Thaps12810;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2076210 2078081 . + . ID=Thaps268775;biotype=protein_coding;description=Membrane spanning protein of the nonaspanin family [Source:UniProtKB/TrEMBL%3BAcc:B8C0G7];external_name=Thaps268775;logic_name=jgi_thaps3 chr4 ensembl transcript 2076210 2078081 . + . ID=Thaps268775;Parent=Thaps268775;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2076210 2076844 . + 0 ID=Thaps268775;Parent=Thaps268775;rank=1 chr4 . exon 2076210 2076844 . + . ID=Thaps268775.1;Parent=Thaps268775;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 2076872 2078081 . + 0 ID=Thaps268775;Parent=Thaps268775;rank=2 chr4 . exon 2076872 2078081 . + . ID=Thaps268775.2;Parent=Thaps268775;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 2079017 2080039 . - . ID=Thaps33696;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0G8];external_name=Thaps33696;logic_name=jgi_thaps3 chr4 ensembl transcript 2079017 2080039 . - . ID=Thaps33696;Parent=Thaps33696;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2079017 2079566 . - 0 ID=Thaps33696;Parent=Thaps33696;rank=3 chr4 . exon 2079017 2079566 . - . ID=Thaps33696.3;Parent=Thaps33696;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2079657 2079741 . - 0 ID=Thaps33696;Parent=Thaps33696;rank=2 chr4 . exon 2079657 2079741 . - . ID=Thaps33696.2;Parent=Thaps33696;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2079958 2080039 . - 0 ID=Thaps33696;Parent=Thaps33696;rank=1 chr4 . exon 2079958 2080039 . - . ID=Thaps33696.1;Parent=Thaps33696;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2080836 2082171 . + . ID=Thaps4853;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0G9];external_name=Thaps4853;logic_name=jgi_thaps3 chr4 ensembl transcript 2080836 2082171 . + . ID=Thaps4853;Parent=Thaps4853;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2080836 2081480 . + 0 ID=Thaps4853;Parent=Thaps4853;rank=1 chr4 . exon 2080836 2081480 . + . ID=Thaps4853.1;Parent=Thaps4853;constitutive=1;rank=1 chr4 . CDS 2081722 2082171 . + 0 ID=Thaps4853;Parent=Thaps4853;rank=2 chr4 . exon 2081722 2082171 . + . ID=Thaps4853.2;Parent=Thaps4853;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 2086165 2087775 . - . ID=Thaps22462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0H1];external_name=Thaps22462;logic_name=jgi_thaps3 chr4 ensembl transcript 2086165 2087775 . - . ID=Thaps22462;Parent=Thaps22462;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2086165 2087775 . - 0 ID=Thaps22462;Parent=Thaps22462;rank=1 chr4 . exon 2086165 2087775 . - . ID=Thaps22462.1;Parent=Thaps22462;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2088957 2090837 . + . ID=Thaps22464;biotype=protein_coding;description=Fumarate hydratase [Source:UniProtKB/TrEMBL%3BAcc:B8C0H3];external_name=FUM1;logic_name=jgi_thaps3 chr4 ensembl transcript 2088957 2090837 . + . ID=Thaps22464;Parent=Thaps22464;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2088957 2090837 . + 0 ID=Thaps22464;Parent=Thaps22464;rank=1 chr4 . exon 2088957 2090837 . + . ID=Thaps22464.1;Parent=Thaps22464;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2093294 2094551 . - . ID=Thaps22465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0H5];external_name=Thaps22465;logic_name=jgi_thaps3 chr4 ensembl transcript 2093294 2094551 . - . ID=Thaps22465;Parent=Thaps22465;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2093294 2093536 . - 0 ID=Thaps22465;Parent=Thaps22465;rank=4 chr4 . exon 2093294 2093536 . - . ID=Thaps22465.4;Parent=Thaps22465;constitutive=1;rank=4 chr4 . CDS 2093633 2094084 . - 0 ID=Thaps22465;Parent=Thaps22465;rank=3 chr4 . CDS 2094176 2094223 . - 0 ID=Thaps22465;Parent=Thaps22465;rank=2 chr4 . CDS 2094329 2094551 . - 0 ID=Thaps22465;Parent=Thaps22465;rank=1 chr4 ensembl protein_coding_gene 2088066 2088599 . + . ID=Thaps40509;biotype=protein_coding;description=RL30%2C ribosomal protein 30 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C0H2];external_name=RL30;logic_name=jgi_thaps3 chr4 ensembl transcript 2088066 2088599 . + . ID=Thaps40509;Parent=Thaps40509;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2088066 2088599 . + 0 ID=Thaps40509;Parent=Thaps40509;rank=1 chr4 . exon 2088066 2088599 . + . ID=Thaps40509.1;Parent=Thaps40509;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2092097 2093125 . + . ID=Thaps4858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0H4];external_name=Thaps4858;logic_name=jgi_thaps3 chr4 ensembl transcript 2092097 2093125 . + . ID=Thaps4858;Parent=Thaps4858;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2092097 2093125 . + 0 ID=Thaps4858;Parent=Thaps4858;rank=1 chr4 . exon 2092097 2093125 . + . ID=Thaps4858.1;Parent=Thaps4858;constitutive=1;rank=1 chr4 . exon 2093633 2094084 . - . ID=Thaps22465.3;Parent=Thaps22465;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . exon 2094176 2094223 . - . ID=Thaps22465.2;Parent=Thaps22465;constitutive=1;rank=2 chr4 . exon 2094329 2094551 . - . ID=Thaps22465.1;Parent=Thaps22465;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2099596 2100986 . - . ID=Thaps262318;biotype=protein_coding;description=Glycosylase [Source:UniProtKB/TrEMBL%3BAcc:B8C0H8];external_name=FPG;logic_name=jgi_thaps3 chr4 ensembl transcript 2099596 2100986 . - . ID=Thaps262318;Parent=Thaps262318;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2099596 2100562 . - 0 ID=Thaps262318;Parent=Thaps262318;rank=2 chr4 . exon 2099596 2100562 . - . ID=Thaps262318.2;Parent=Thaps262318;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2100611 2100986 . - 0 ID=Thaps262318;Parent=Thaps262318;rank=1 chr4 . exon 2100611 2100986 . - . ID=Thaps262318.1;Parent=Thaps262318;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2101386 2102318 . + . ID=Thaps33288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0H9];external_name=Thaps33288;logic_name=jgi_thaps3 chr4 ensembl transcript 2101386 2102318 . + . ID=Thaps33288;Parent=Thaps33288;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2101386 2101466 . + 0 ID=Thaps33288;Parent=Thaps33288;rank=1 chr4 . exon 2101386 2101466 . + . ID=Thaps33288.1;Parent=Thaps33288;constitutive=1;rank=1 chr4 . CDS 2101560 2101832 . + 0 ID=Thaps33288;Parent=Thaps33288;rank=2 chr4 . exon 2101560 2101832 . + . ID=Thaps33288.2;Parent=Thaps33288;constitutive=1;rank=2 chr4 . CDS 2102046 2102318 . + 0 ID=Thaps33288;Parent=Thaps33288;rank=3 chr4 . exon 2102046 2102318 . + . ID=Thaps33288.3;Parent=Thaps33288;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 2098996 2099394 . + . ID=Thaps33829;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0H7];external_name=Thaps33829;logic_name=jgi_thaps3 chr4 ensembl transcript 2098996 2099394 . + . ID=Thaps33829;Parent=Thaps33829;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2098996 2099151 . + 0 ID=Thaps33829;Parent=Thaps33829;rank=1 chr4 . exon 2098996 2099151 . + . ID=Thaps33829.1;Parent=Thaps33829;constitutive=1;rank=1 chr4 . CDS 2099260 2099394 . + 0 ID=Thaps33829;Parent=Thaps33829;rank=2 chr4 . exon 2099260 2099394 . + . ID=Thaps33829.2;Parent=Thaps33829;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 2096743 2097471 . + . ID=Thaps4860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0H6];external_name=Thaps4860;logic_name=jgi_thaps3 chr4 ensembl transcript 2096743 2097471 . + . ID=Thaps4860;Parent=Thaps4860;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2096743 2097471 . + 0 ID=Thaps4860;Parent=Thaps4860;rank=1 chr4 . exon 2096743 2097471 . + . ID=Thaps4860.1;Parent=Thaps4860;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2102371 2105902 . - . ID=Thaps4862;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0I0];external_name=Thaps4862;logic_name=jgi_thaps3 chr4 ensembl transcript 2102371 2105902 . - . ID=Thaps4862;Parent=Thaps4862;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2102371 2102706 . - 0 ID=Thaps4862;Parent=Thaps4862;rank=4 chr4 . exon 2102371 2102706 . - . ID=Thaps4862.4;Parent=Thaps4862;constitutive=1;rank=4 chr4 . CDS 2102848 2103939 . - 0 ID=Thaps4862;Parent=Thaps4862;rank=3 chr4 . exon 2102848 2103939 . - . ID=Thaps4862.3;Parent=Thaps4862;constitutive=1;rank=3 chr4 . CDS 2104028 2104165 . - 0 ID=Thaps4862;Parent=Thaps4862;rank=2 chr4 . CDS 2104253 2105902 . - 0 ID=Thaps4862;Parent=Thaps4862;rank=1 chr4 . repeat_region 2111498 2111526 . ? . description=trf chr4 . repeat_region 2112079 2112106 . ? . description=dust chr4 . repeat_region 2112665 2112684 . ? . description=dust chr4 . repeat_region 2113143 2113547 . ? . description=trf chr4 . repeat_region 2113246 2113273 . ? . description=trf chr4 . repeat_region 2113246 2113273 . ? . description=dust chr4 ensembl protein_coding_gene 2108108 2109476 . + . ID=Thaps262320;biotype=protein_coding;description=Triose or hexose phosphate translocator [Source:UniProtKB/TrEMBL%3BAcc:B8C0I2];external_name=Thaps262320;logic_name=jgi_thaps3 chr4 ensembl transcript 2108108 2109476 . + . ID=Thaps262320;Parent=Thaps262320;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2108108 2108147 . + 0 ID=Thaps262320;Parent=Thaps262320;rank=1 chr4 . exon 2108108 2108147 . + . ID=Thaps262320.1;Parent=Thaps262320;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2108256 2108311 . + 0 ID=Thaps262320;Parent=Thaps262320;rank=2 chr4 . exon 2108256 2108311 . + . ID=Thaps262320.2;Parent=Thaps262320;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2108384 2108517 . + 0 ID=Thaps262320;Parent=Thaps262320;rank=3 chr4 . exon 2108384 2108517 . + . ID=Thaps262320.3;Parent=Thaps262320;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2108641 2108937 . + 0 ID=Thaps262320;Parent=Thaps262320;rank=4 chr4 . exon 2108641 2108937 . + . ID=Thaps262320.4;Parent=Thaps262320;constitutive=1;rank=4 chr4 . CDS 2109043 2109476 . + 0 ID=Thaps262320;Parent=Thaps262320;rank=5 chr4 . exon 2109043 2109476 . + . ID=Thaps262320.5;Parent=Thaps262320;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . exon 2104028 2104165 . - . ID=Thaps4862.2;Parent=Thaps4862;constitutive=1;rank=2 chr4 . exon 2104253 2105902 . - . ID=Thaps4862.1;Parent=Thaps4862;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2106238 2107773 . - . ID=Thaps4863;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0I1];external_name=Thaps4863;logic_name=jgi_thaps3 chr4 ensembl transcript 2106238 2107773 . - . ID=Thaps4863;Parent=Thaps4863;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2106238 2107773 . - 0 ID=Thaps4863;Parent=Thaps4863;rank=1 chr4 . exon 2106238 2107773 . - . ID=Thaps4863.1;Parent=Thaps4863;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2110325 2110816 . + . ID=Thaps4864;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0I3];external_name=Thaps4864;logic_name=jgi_thaps3 chr4 ensembl transcript 2110325 2110816 . + . ID=Thaps4864;Parent=Thaps4864;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2110325 2110816 . + 0 ID=Thaps4864;Parent=Thaps4864;rank=1 chr4 . exon 2110325 2110816 . + . ID=Thaps4864.1;Parent=Thaps4864;constitutive=1;rank=1 chr4 . repeat_region 2116458 2116596 . + . description=TE2c_TP chr4 . repeat_region 2122579 2122689 . - . description=Copia8I_TP chr4 . repeat_region 2122773 2122892 . - . description=Copia8I_TP chr4 ensembl protein_coding_gene 2122984 2123191 . - . ID=Thaps262322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0I6];external_name=Thaps262322;logic_name=jgi_thaps3 chr4 ensembl transcript 2122984 2123191 . - . ID=Thaps262322;Parent=Thaps262322;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2122984 2123191 . - 0 ID=Thaps262322;Parent=Thaps262322;rank=1 chr4 . exon 2122984 2123191 . - . ID=Thaps262322.1;Parent=Thaps262322;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2114850 2116317 . - . ID=Thaps4865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0I4];external_name=Thaps4865;logic_name=jgi_thaps3 chr4 ensembl transcript 2114850 2116317 . - . ID=Thaps4865;Parent=Thaps4865;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2114850 2115844 . - 0 ID=Thaps4865;Parent=Thaps4865;rank=3 chr4 . exon 2114850 2115844 . - . ID=Thaps4865.3;Parent=Thaps4865;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2115936 2116057 . - 0 ID=Thaps4865;Parent=Thaps4865;rank=2 chr4 . exon 2115936 2116057 . - . ID=Thaps4865.2;Parent=Thaps4865;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2116190 2116317 . - 0 ID=Thaps4865;Parent=Thaps4865;rank=1 chr4 . exon 2116190 2116317 . - . ID=Thaps4865.1;Parent=Thaps4865;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 2116858 2122394 . - . ID=Thaps4866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0I5];external_name=Thaps4866;logic_name=jgi_thaps3 chr4 ensembl transcript 2116858 2122394 . - . ID=Thaps4866;Parent=Thaps4866;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2116858 2117478 . - 0 ID=Thaps4866;Parent=Thaps4866;rank=7 chr4 . exon 2116858 2117478 . - . ID=Thaps4866.7;Parent=Thaps4866;constitutive=1;rank=7 chr4 . CDS 2117619 2118014 . - 0 ID=Thaps4866;Parent=Thaps4866;rank=6 chr4 . exon 2117619 2118014 . - . ID=Thaps4866.6;Parent=Thaps4866;constitutive=1;rank=6 chr4 . CDS 2118283 2118512 . - 0 ID=Thaps4866;Parent=Thaps4866;rank=5 chr4 . exon 2118283 2118512 . - . ID=Thaps4866.5;Parent=Thaps4866;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 2118548 2119763 . - 0 ID=Thaps4866;Parent=Thaps4866;rank=4 chr4 . exon 2118548 2119763 . - . ID=Thaps4866.4;Parent=Thaps4866;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 2119919 2120178 . - 0 ID=Thaps4866;Parent=Thaps4866;rank=3 chr4 . exon 2119919 2120178 . - . ID=Thaps4866.3;Parent=Thaps4866;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2120283 2121467 . - 0 ID=Thaps4866;Parent=Thaps4866;rank=2 chr4 . exon 2120283 2121467 . - . ID=Thaps4866.2;Parent=Thaps4866;constitutive=1;rank=2 chr4 . CDS 2121629 2122394 . - 0 ID=Thaps4866;Parent=Thaps4866;rank=1 chr4 . exon 2121629 2122394 . - . ID=Thaps4866.1;Parent=Thaps4866;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . repeat_region 2123411 2123769 . ? . description=trf chr4 . repeat_region 2123416 2123825 . ? . description=dust chr4 . repeat_region 2123744 2123818 . ? . description=trf chr4 . repeat_region 2123784 2123825 . ? . description=trf chr4 . repeat_region 2124244 2124253 . ? . description=dust chr4 . repeat_region 2124326 2124334 . ? . description=dust chr4 . repeat_region 2124525 2124544 . ? . description=trf chr4 . repeat_region 2124994 2125082 . + . description=Harbinger3_TP chr4 . repeat_region 2125339 2125368 . ? . description=trf chr4 ensembl protein_coding_gene 2127304 2131687 . - . ID=Thaps22467;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0I8];external_name=Thaps22467;logic_name=jgi_thaps3 chr4 ensembl transcript 2127304 2131687 . - . ID=Thaps22467;Parent=Thaps22467;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2127304 2128104 . - 0 ID=Thaps22467;Parent=Thaps22467;rank=4 chr4 . exon 2127304 2128104 . - . ID=Thaps22467.4;Parent=Thaps22467;constitutive=1;rank=4 chr4 . CDS 2128181 2129238 . - 0 ID=Thaps22467;Parent=Thaps22467;rank=3 chr4 . exon 2128181 2129238 . - . ID=Thaps22467.3;Parent=Thaps22467;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2129367 2130660 . - 0 ID=Thaps22467;Parent=Thaps22467;rank=2 chr4 . exon 2129367 2130660 . - . ID=Thaps22467.2;Parent=Thaps22467;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2130755 2131687 . - 0 ID=Thaps22467;Parent=Thaps22467;rank=1 chr4 . exon 2130755 2131687 . - . ID=Thaps22467.1;Parent=Thaps22467;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2132351 2133889 . + . ID=Thaps22468;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0I9];external_name=Thaps22468;logic_name=jgi_thaps3 chr4 ensembl transcript 2132351 2133889 . + . ID=Thaps22468;Parent=Thaps22468;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2132351 2133889 . + 0 ID=Thaps22468;Parent=Thaps22468;rank=1 chr4 . exon 2132351 2133889 . + . ID=Thaps22468.1;Parent=Thaps22468;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2125475 2127187 . + . ID=Thaps4867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0I7];external_name=Thaps4867;logic_name=jgi_thaps3 chr4 ensembl transcript 2125475 2127187 . + . ID=Thaps4867;Parent=Thaps4867;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2125475 2127187 . + 0 ID=Thaps4867;Parent=Thaps4867;rank=1 chr4 . exon 2125475 2127187 . + . ID=Thaps4867.1;Parent=Thaps4867;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2138897 2139988 . - . ID=Thaps262325;biotype=protein_coding;description=rRNA methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8C0J2];external_name=Thaps262325;logic_name=jgi_thaps3 chr4 ensembl transcript 2138897 2139988 . - . ID=Thaps262325;Parent=Thaps262325;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2138897 2139525 . - 0 ID=Thaps262325;Parent=Thaps262325;rank=3 chr4 . exon 2138897 2139525 . - . ID=Thaps262325.3;Parent=Thaps262325;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2139580 2139711 . - 0 ID=Thaps262325;Parent=Thaps262325;rank=2 chr4 . exon 2139580 2139711 . - . ID=Thaps262325.2;Parent=Thaps262325;constitutive=1;rank=2 chr4 . CDS 2139841 2139988 . - 0 ID=Thaps262325;Parent=Thaps262325;rank=1 chr4 . exon 2139841 2139988 . - . ID=Thaps262325.1;Parent=Thaps262325;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2140622 2143925 . - . ID=Thaps262326;biotype=protein_coding;description=Ran binding protein 4-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0J3];external_name=Thaps262326;logic_name=jgi_thaps3 chr4 ensembl transcript 2140622 2143925 . - . ID=Thaps262326;Parent=Thaps262326;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2140622 2141753 . - 0 ID=Thaps262326;Parent=Thaps262326;rank=4 chr4 . exon 2140622 2141753 . - . ID=Thaps262326.4;Parent=Thaps262326;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 2141833 2142791 . - 0 ID=Thaps262326;Parent=Thaps262326;rank=3 chr4 . exon 2141833 2142791 . - . ID=Thaps262326.3;Parent=Thaps262326;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2142828 2143626 . - 0 ID=Thaps262326;Parent=Thaps262326;rank=2 chr4 . exon 2142828 2143626 . - . ID=Thaps262326.2;Parent=Thaps262326;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2143788 2143925 . - 0 ID=Thaps262326;Parent=Thaps262326;rank=1 chr4 ensembl protein_coding_gene 2133952 2135454 . - . ID=Thaps33891;biotype=protein_coding;description=Plastid RNA polymerase sigma factor [Source:UniProtKB/TrEMBL%3BAcc:B8C0J0];external_name=RPOD_2;logic_name=jgi_thaps3 chr4 ensembl transcript 2133952 2135454 . - . ID=Thaps33891;Parent=Thaps33891;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2133952 2134173 . - 0 ID=Thaps33891;Parent=Thaps33891;rank=4 chr4 . exon 2133952 2134173 . - . ID=Thaps33891.4;Parent=Thaps33891;constitutive=1;rank=4 chr4 . CDS 2134264 2134648 . - 0 ID=Thaps33891;Parent=Thaps33891;rank=3 chr4 . exon 2134264 2134648 . - . ID=Thaps33891.3;Parent=Thaps33891;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2134742 2134961 . - 0 ID=Thaps33891;Parent=Thaps33891;rank=2 chr4 . exon 2134742 2134961 . - . ID=Thaps33891.2;Parent=Thaps33891;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2135316 2135454 . - 0 ID=Thaps33891;Parent=Thaps33891;rank=1 chr4 . exon 2135316 2135454 . - . ID=Thaps33891.1;Parent=Thaps33891;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2137295 2138691 . + . ID=Thaps4871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0J1];external_name=Thaps4871;logic_name=jgi_thaps3 chr4 ensembl transcript 2137295 2138691 . + . ID=Thaps4871;Parent=Thaps4871;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2137295 2138528 . + 0 ID=Thaps4871;Parent=Thaps4871;rank=1 chr4 . exon 2137295 2138528 . + . ID=Thaps4871.1;Parent=Thaps4871;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2138603 2138691 . + 0 ID=Thaps4871;Parent=Thaps4871;rank=2 chr4 . exon 2138603 2138691 . + . ID=Thaps4871.2;Parent=Thaps4871;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . repeat_region 2147121 2147129 . ? . description=dust chr4 . exon 2143788 2143925 . - . ID=Thaps262326.1;Parent=Thaps262326;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2144407 2145741 . - . ID=Thaps4873;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0J4];external_name=Thaps4873;logic_name=jgi_thaps3 chr4 ensembl transcript 2144407 2145741 . - . ID=Thaps4873;Parent=Thaps4873;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2144407 2145741 . - 0 ID=Thaps4873;Parent=Thaps4873;rank=1 chr4 . exon 2144407 2145741 . - . ID=Thaps4873.1;Parent=Thaps4873;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2159586 2161563 . - . ID=Thaps12982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0J5];external_name=Thaps12982;logic_name=jgi_thaps3 chr4 ensembl transcript 2159586 2161563 . - . ID=Thaps12982;Parent=Thaps12982;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2159586 2159724 . - 0 ID=Thaps12982;Parent=Thaps12982;rank=4 chr4 . exon 2159586 2159724 . - . ID=Thaps12982.4;Parent=Thaps12982;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 2159767 2160004 . - 0 ID=Thaps12982;Parent=Thaps12982;rank=3 chr4 . exon 2159767 2160004 . - . ID=Thaps12982.3;Parent=Thaps12982;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2160098 2160383 . - 0 ID=Thaps12982;Parent=Thaps12982;rank=2 chr4 . exon 2160098 2160383 . - . ID=Thaps12982.2;Parent=Thaps12982;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2160460 2161563 . - 0 ID=Thaps12982;Parent=Thaps12982;rank=1 chr4 . exon 2160460 2161563 . - . ID=Thaps12982.1;Parent=Thaps12982;constitutive=1;rank=1 chr4 . repeat_region 2166096 2166103 . ? . description=dust chr4 ensembl protein_coding_gene 2170669 2173349 . + . ID=Thaps22472;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0J8];external_name=Thaps22472;logic_name=jgi_thaps3 chr4 ensembl transcript 2170669 2173349 . + . ID=Thaps22472;Parent=Thaps22472;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2170669 2170987 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=1 chr4 . exon 2170669 2170987 . + . ID=Thaps22472.1;Parent=Thaps22472;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2171134 2171764 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=2 chr4 . exon 2171134 2171764 . + . ID=Thaps22472.2;Parent=Thaps22472;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2171886 2171985 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=3 chr4 . exon 2171886 2171985 . + . ID=Thaps22472.3;Parent=Thaps22472;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2172061 2172135 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=4 chr4 . exon 2172061 2172135 . + . ID=Thaps22472.4;Parent=Thaps22472;constitutive=1;rank=4 chr4 . CDS 2172225 2172282 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=5 chr4 . exon 2172225 2172282 . + . ID=Thaps22472.5;Parent=Thaps22472;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . CDS 2172362 2172387 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=6 chr4 . exon 2172362 2172387 . + . ID=Thaps22472.6;Parent=Thaps22472;constitutive=1;ensembl_end_phase=2;rank=6 chr4 . CDS 2172467 2172554 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=7 chr4 . exon 2172467 2172554 . + . ID=Thaps22472.7;Parent=Thaps22472;constitutive=1;ensembl_end_phase=1;rank=7 chr4 . CDS 2172641 2172928 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=8 chr4 . exon 2172641 2172928 . + . ID=Thaps22472.8;Parent=Thaps22472;constitutive=1;rank=8 chr4 . CDS 2173014 2173048 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=9 chr4 . exon 2173014 2173048 . + . ID=Thaps22472.9;Parent=Thaps22472;constitutive=1;ensembl_end_phase=2;rank=9 chr4 . CDS 2173137 2173349 . + 0 ID=Thaps22472;Parent=Thaps22472;rank=10 chr4 . exon 2173137 2173349 . + . ID=Thaps22472.10;Parent=Thaps22472;constitutive=1;rank=10 chr4 ensembl protein_coding_gene 2167176 2169354 . + . ID=Thaps4875;biotype=protein_coding;description=Pyruvate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8C0J6];external_name=Thaps4875;logic_name=jgi_thaps3 chr4 ensembl transcript 2167176 2169354 . + . ID=Thaps4875;Parent=Thaps4875;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2167176 2167949 . + 0 ID=Thaps4875;Parent=Thaps4875;rank=1 chr4 . exon 2167176 2167949 . + . ID=Thaps4875.1;Parent=Thaps4875;constitutive=1;rank=1 chr4 . CDS 2168026 2168529 . + 0 ID=Thaps4875;Parent=Thaps4875;rank=2 chr4 . exon 2168026 2168529 . + . ID=Thaps4875.2;Parent=Thaps4875;constitutive=1;rank=2 chr4 . CDS 2168608 2168908 . + 0 ID=Thaps4875;Parent=Thaps4875;rank=3 chr4 . exon 2168608 2168908 . + . ID=Thaps4875.3;Parent=Thaps4875;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2168985 2169050 . + 0 ID=Thaps4875;Parent=Thaps4875;rank=4 chr4 . exon 2168985 2169050 . + . ID=Thaps4875.4;Parent=Thaps4875;constitutive=1;rank=4 chr4 . CDS 2169146 2169354 . + 0 ID=Thaps4875;Parent=Thaps4875;rank=5 chr4 . exon 2169146 2169354 . + . ID=Thaps4875.5;Parent=Thaps4875;constitutive=1;ensembl_end_phase=2;rank=5 chr4 ensembl protein_coding_gene 2169783 2170280 . - . ID=Thaps4876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0J7];external_name=Thaps4876;logic_name=jgi_thaps3 chr4 ensembl transcript 2169783 2170280 . - . ID=Thaps4876;Parent=Thaps4876;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2169783 2170280 . - 0 ID=Thaps4876;Parent=Thaps4876;rank=1 chr4 . exon 2169783 2170280 . - . ID=Thaps4876.1;Parent=Thaps4876;constitutive=1;rank=1 chr4 . repeat_region 2173396 2173446 . ? . description=trf chr4 . repeat_region 2173404 2173446 . ? . description=trf chr4 . repeat_region 2173434 2173485 . ? . description=trf chr4 . repeat_region 2178129 2178183 . ? . description=trf chr4 ensembl protein_coding_gene 2175357 2176607 . - . ID=Thaps22473;biotype=protein_coding;description=Aliphatic amidase [Source:UniProtKB/TrEMBL%3BAcc:B8C0K1];external_name=Thaps22473;logic_name=jgi_thaps3 chr4 ensembl transcript 2175357 2176607 . - . ID=Thaps22473;Parent=Thaps22473;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2175357 2175519 . - 0 ID=Thaps22473;Parent=Thaps22473;rank=3 chr4 . exon 2175357 2175519 . - . ID=Thaps22473.3;Parent=Thaps22473;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2175609 2175810 . - 0 ID=Thaps22473;Parent=Thaps22473;rank=2 chr4 . exon 2175609 2175810 . - . ID=Thaps22473.2;Parent=Thaps22473;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2175893 2176607 . - 0 ID=Thaps22473;Parent=Thaps22473;rank=1 chr4 . exon 2175893 2176607 . - . ID=Thaps22473.1;Parent=Thaps22473;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2177080 2178666 . + . ID=Thaps22474;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0K2];external_name=Thaps22474;logic_name=jgi_thaps3 chr4 ensembl transcript 2177080 2178666 . + . ID=Thaps22474;Parent=Thaps22474;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2177080 2178666 . + 0 ID=Thaps22474;Parent=Thaps22474;rank=1 chr4 . exon 2177080 2178666 . + . ID=Thaps22474.1;Parent=Thaps22474;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2182205 2182660 . - . ID=Thaps26221;biotype=protein_coding;description=RS13%2C ribosomal protein 13 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C0K5];external_name=RS13;logic_name=jgi_thaps3 chr4 ensembl transcript 2182205 2182660 . - . ID=Thaps26221;Parent=Thaps26221;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2182205 2182660 . - 0 ID=Thaps26221;Parent=Thaps26221;rank=1 chr4 . exon 2182205 2182660 . - . ID=Thaps26221.1;Parent=Thaps26221;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2180778 2181352 . + . ID=Thaps262332;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c light-harvesting protein%2C lhcr type [Source:UniProtKB/TrEMBL%3BAcc:B8C0K4];external_name=LHCR14;logic_name=jgi_thaps3 chr4 ensembl transcript 2180778 2181352 . + . ID=Thaps262332;Parent=Thaps262332;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2180778 2181216 . + 0 ID=Thaps262332;Parent=Thaps262332;rank=1 chr4 . exon 2180778 2181216 . + . ID=Thaps262332.1;Parent=Thaps262332;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2181304 2181352 . + 0 ID=Thaps262332;Parent=Thaps262332;rank=2 chr4 . exon 2181304 2181352 . + . ID=Thaps262332.2;Parent=Thaps262332;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 2179165 2179677 . - . ID=Thaps33606;biotype=protein_coding;description=Fucoxanthin chl a/c light-harvesting protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0K3];external_name=LHCR4;logic_name=jgi_thaps3 chr4 ensembl transcript 2179165 2179677 . - . ID=Thaps33606;Parent=Thaps33606;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2179165 2179677 . - 0 ID=Thaps33606;Parent=Thaps33606;rank=1 chr4 . exon 2179165 2179677 . - . ID=Thaps33606.1;Parent=Thaps33606;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2173581 2173883 . - . ID=Thaps4878;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0J9];external_name=Thaps4878;logic_name=jgi_thaps3 chr4 ensembl transcript 2173581 2173883 . - . ID=Thaps4878;Parent=Thaps4878;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2173581 2173883 . - 0 ID=Thaps4878;Parent=Thaps4878;rank=1 chr4 . exon 2173581 2173883 . - . ID=Thaps4878.1;Parent=Thaps4878;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2174196 2174963 . + . ID=Thaps4879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0K0];external_name=Thaps4879;logic_name=jgi_thaps3 chr4 ensembl transcript 2174196 2174963 . + . ID=Thaps4879;Parent=Thaps4879;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2174196 2174963 . + 0 ID=Thaps4879;Parent=Thaps4879;rank=1 chr4 . exon 2174196 2174963 . + . ID=Thaps4879.1;Parent=Thaps4879;constitutive=1;rank=1 chr4 . biological_region 2183462 2183463 0.999 + . logic_name=eponine chr4 . repeat_region 2185085 2185108 . ? . description=dust chr4 ensembl protein_coding_gene 2185928 2186275 . + . ID=Thaps17006;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0K7];external_name=Thaps17006;logic_name=jgi_thaps3 chr4 ensembl transcript 2185928 2186275 . + . ID=Thaps17006;Parent=Thaps17006;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2185928 2186275 . + 0 ID=Thaps17006;Parent=Thaps17006;rank=1 chr4 . exon 2185928 2186275 . + . ID=Thaps17006.1;Parent=Thaps17006;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2183849 2184469 . + . ID=Thaps22476;biotype=protein_coding;description=60S ribosomal protein L13 [Source:UniProtKB/TrEMBL%3BAcc:B8C0K6];external_name=RL13E;logic_name=jgi_thaps3 chr4 ensembl transcript 2183849 2184469 . + . ID=Thaps22476;Parent=Thaps22476;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2183849 2184469 . + 0 ID=Thaps22476;Parent=Thaps22476;rank=1 chr4 . exon 2183849 2184469 . + . ID=Thaps22476.1;Parent=Thaps22476;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2187020 2191540 . + . ID=Thaps22477;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0K8];external_name=Thaps22477;logic_name=jgi_thaps3 chr4 ensembl transcript 2187020 2191540 . + . ID=Thaps22477;Parent=Thaps22477;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2187020 2187129 . + 0 ID=Thaps22477;Parent=Thaps22477;rank=1 chr4 . exon 2187020 2187129 . + . ID=Thaps22477.1;Parent=Thaps22477;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 2187328 2187366 . + 0 ID=Thaps22477;Parent=Thaps22477;rank=2 chr4 . exon 2187328 2187366 . + . ID=Thaps22477.2;Parent=Thaps22477;constitutive=1;rank=2 chr4 . CDS 2187691 2191540 . + 0 ID=Thaps22477;Parent=Thaps22477;rank=3 chr4 . exon 2187691 2191540 . + . ID=Thaps22477.3;Parent=Thaps22477;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 2191697 2192460 . + . ID=Thaps4888;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0K9];external_name=Thaps4888;logic_name=jgi_thaps3 chr4 ensembl transcript 2191697 2192460 . + . ID=Thaps4888;Parent=Thaps4888;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2191697 2191757 . + 0 ID=Thaps4888;Parent=Thaps4888;rank=1 chr4 . exon 2191697 2191757 . + . ID=Thaps4888.1;Parent=Thaps4888;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2191909 2192187 . + 0 ID=Thaps4888;Parent=Thaps4888;rank=2 chr4 . exon 2191909 2192187 . + . ID=Thaps4888.2;Parent=Thaps4888;constitutive=1;rank=2 chr4 . CDS 2192282 2192460 . + 0 ID=Thaps4888;Parent=Thaps4888;rank=3 chr4 . exon 2192282 2192460 . + . ID=Thaps4888.3;Parent=Thaps4888;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 2194002 2194763 . + . ID=Thaps262335;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0L0];external_name=Thaps262335;logic_name=jgi_thaps3 chr4 ensembl transcript 2194002 2194763 . + . ID=Thaps262335;Parent=Thaps262335;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2194002 2194763 . + 0 ID=Thaps262335;Parent=Thaps262335;rank=1 chr4 . exon 2194002 2194763 . + . ID=Thaps262335.1;Parent=Thaps262335;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2198862 2199922 . + . ID=Thaps268788;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0L3];external_name=MYB18;logic_name=jgi_thaps3 chr4 ensembl transcript 2198862 2199922 . + . ID=Thaps268788;Parent=Thaps268788;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2198862 2199062 . + 0 ID=Thaps268788;Parent=Thaps268788;rank=1 chr4 . exon 2198862 2199062 . + . ID=Thaps268788.1;Parent=Thaps268788;constitutive=1;rank=1 chr4 . CDS 2199140 2199922 . + 0 ID=Thaps268788;Parent=Thaps268788;rank=2 chr4 . exon 2199140 2199922 . + . ID=Thaps268788.2;Parent=Thaps268788;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 2200342 2201112 . - . ID=Thaps28100;biotype=protein_coding;description=3%2C4-dihydroxy-2-butanone 4-phosphate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8C0L4];external_name=Thaps28100;logic_name=jgi_thaps3 chr4 ensembl transcript 2200342 2201112 . - . ID=Thaps28100;Parent=Thaps28100;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2200342 2200682 . - 0 ID=Thaps28100;Parent=Thaps28100;rank=2 chr4 . exon 2200342 2200682 . - . ID=Thaps28100.2;Parent=Thaps28100;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2200776 2201112 . - 0 ID=Thaps28100;Parent=Thaps28100;rank=1 chr4 . exon 2200776 2201112 . - . ID=Thaps28100.1;Parent=Thaps28100;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2201287 2201676 . - . ID=Thaps33619;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0L5];external_name=Thaps33619;logic_name=jgi_thaps3 chr4 ensembl transcript 2201287 2201676 . - . ID=Thaps33619;Parent=Thaps33619;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2201287 2201676 . - 0 ID=Thaps33619;Parent=Thaps33619;rank=1 chr4 . exon 2201287 2201676 . - . ID=Thaps33619.1;Parent=Thaps33619;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2195037 2196832 . - . ID=Thaps40522;biotype=protein_coding;description=Vacuolar ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8C0L1];external_name=VAT1;logic_name=jgi_thaps3 chr4 ensembl transcript 2195037 2196832 . - . ID=Thaps40522;Parent=Thaps40522;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2195037 2195503 . - 0 ID=Thaps40522;Parent=Thaps40522;rank=3 chr4 . exon 2195037 2195503 . - . ID=Thaps40522.3;Parent=Thaps40522;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2195611 2196563 . - 0 ID=Thaps40522;Parent=Thaps40522;rank=2 chr4 . exon 2195611 2196563 . - . ID=Thaps40522.2;Parent=Thaps40522;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2196732 2196832 . - 0 ID=Thaps40522;Parent=Thaps40522;rank=1 chr4 . exon 2196732 2196832 . - . ID=Thaps40522.1;Parent=Thaps40522;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 2197136 2198298 . - . ID=Thaps4891;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0L2];external_name=Thaps4891;logic_name=jgi_thaps3 chr4 ensembl transcript 2197136 2198298 . - . ID=Thaps4891;Parent=Thaps4891;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2197136 2197200 . - 0 ID=Thaps4891;Parent=Thaps4891;rank=2 chr4 . exon 2197136 2197200 . - . ID=Thaps4891.2;Parent=Thaps4891;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2197332 2198298 . - 0 ID=Thaps4891;Parent=Thaps4891;rank=1 chr4 . exon 2197332 2198298 . - . ID=Thaps4891.1;Parent=Thaps4891;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2202973 2203545 . + . ID=Thaps4894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0L6];external_name=Thaps4894;logic_name=jgi_thaps3 chr4 ensembl transcript 2202973 2203545 . + . ID=Thaps4894;Parent=Thaps4894;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2202973 2203545 . + 0 ID=Thaps4894;Parent=Thaps4894;rank=1 chr4 . exon 2202973 2203545 . + . ID=Thaps4894.1;Parent=Thaps4894;constitutive=1;rank=1 chr4 . repeat_region 2208909 2208928 . ? . description=trf chr4 . repeat_region 2208909 2208928 . ? . description=dust chr4 . repeat_region 2209011 2209042 . ? . description=trf chr4 . repeat_region 2209011 2209042 . ? . description=dust chr4 . repeat_region 2210113 2210142 . ? . description=trf chr4 ensembl protein_coding_gene 2208109 2210557 . + . ID=Thaps22481;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0L9];external_name=Thaps22481;logic_name=jgi_thaps3 chr4 ensembl transcript 2208109 2210557 . + . ID=Thaps22481;Parent=Thaps22481;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2208109 2208457 . + 0 ID=Thaps22481;Parent=Thaps22481;rank=1 chr4 . exon 2208109 2208457 . + . ID=Thaps22481.1;Parent=Thaps22481;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2208494 2208637 . + 0 ID=Thaps22481;Parent=Thaps22481;rank=2 chr4 . exon 2208494 2208637 . + . ID=Thaps22481.2;Parent=Thaps22481;constitutive=1;rank=2 chr4 . CDS 2208722 2209587 . + 0 ID=Thaps22481;Parent=Thaps22481;rank=3 chr4 . exon 2208722 2209587 . + . ID=Thaps22481.3;Parent=Thaps22481;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2209618 2209939 . + 0 ID=Thaps22481;Parent=Thaps22481;rank=4 chr4 . exon 2209618 2209939 . + . ID=Thaps22481.4;Parent=Thaps22481;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 2210028 2210557 . + 0 ID=Thaps22481;Parent=Thaps22481;rank=5 chr4 . exon 2210028 2210557 . + . ID=Thaps22481.5;Parent=Thaps22481;constitutive=1;ensembl_end_phase=2;rank=5 chr4 ensembl protein_coding_gene 2212531 2216256 . - . ID=Thaps22482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0M1];external_name=Thaps22482;logic_name=jgi_thaps3 chr4 ensembl transcript 2212531 2216256 . - . ID=Thaps22482;Parent=Thaps22482;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2212531 2216256 . - 0 ID=Thaps22482;Parent=Thaps22482;rank=1 chr4 . exon 2212531 2216256 . - . ID=Thaps22482.1;Parent=Thaps22482;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2203842 2205103 . - . ID=Thaps428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0L7];external_name=Thaps428;logic_name=jgi_thaps3 chr4 ensembl transcript 2203842 2205103 . - . ID=Thaps428;Parent=Thaps428;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2203842 2204930 . - 0 ID=Thaps428;Parent=Thaps428;rank=2 chr4 . exon 2203842 2204930 . - . ID=Thaps428.2;Parent=Thaps428;constitutive=1;rank=2 chr4 . CDS 2205080 2205103 . - 0 ID=Thaps428;Parent=Thaps428;rank=1 chr4 . exon 2205080 2205103 . - . ID=Thaps428.1;Parent=Thaps428;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2205673 2207187 . + . ID=Thaps4896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0L8];external_name=Thaps4896;logic_name=jgi_thaps3 chr4 ensembl transcript 2205673 2207187 . + . ID=Thaps4896;Parent=Thaps4896;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2205673 2207187 . + 0 ID=Thaps4896;Parent=Thaps4896;rank=1 chr4 . exon 2205673 2207187 . + . ID=Thaps4896.1;Parent=Thaps4896;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2210788 2211987 . - . ID=Thaps4898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0M0];external_name=Thaps4898;logic_name=jgi_thaps3 chr4 ensembl transcript 2210788 2211987 . - . ID=Thaps4898;Parent=Thaps4898;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2210788 2211987 . - 0 ID=Thaps4898;Parent=Thaps4898;rank=1 chr4 . exon 2210788 2211987 . - . ID=Thaps4898.1;Parent=Thaps4898;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2218588 2223025 . - . ID=Thaps22483;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0M3];external_name=Thaps22483;logic_name=jgi_thaps3 chr4 ensembl transcript 2218588 2223025 . - . ID=Thaps22483;Parent=Thaps22483;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2218588 2220752 . - 0 ID=Thaps22483;Parent=Thaps22483;rank=5 chr4 . exon 2218588 2220752 . - . ID=Thaps22483.5;Parent=Thaps22483;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 2220846 2222102 . - 0 ID=Thaps22483;Parent=Thaps22483;rank=4 chr4 . exon 2220846 2222102 . - . ID=Thaps22483.4;Parent=Thaps22483;constitutive=1;rank=4 chr4 . CDS 2222235 2222634 . - 0 ID=Thaps22483;Parent=Thaps22483;rank=3 chr4 . exon 2222235 2222634 . - . ID=Thaps22483.3;Parent=Thaps22483;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2222698 2222960 . - 0 ID=Thaps22483;Parent=Thaps22483;rank=2 chr4 . exon 2222698 2222960 . - . ID=Thaps22483.2;Parent=Thaps22483;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2222989 2223025 . - 0 ID=Thaps22483;Parent=Thaps22483;rank=1 chr4 . exon 2222989 2223025 . - . ID=Thaps22483.1;Parent=Thaps22483;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2216754 2217560 . + . ID=Thaps4900;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0M2];external_name=Thaps4900;logic_name=jgi_thaps3 chr4 ensembl transcript 2216754 2217560 . + . ID=Thaps4900;Parent=Thaps4900;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2216754 2217560 . + 0 ID=Thaps4900;Parent=Thaps4900;rank=1 chr4 . exon 2216754 2217560 . + . ID=Thaps4900.1;Parent=Thaps4900;constitutive=1;rank=1 chr4 . repeat_region 2223634 2223697 . ? . description=dust chr4 . repeat_region 2226739 2226771 . ? . description=trf chr4 ensembl tRNA_gene 2223710 2223781 . - . ID=EPrTPOG00000000045;biotype=tRNA;description=tRNA-Gln for anticodon CUG [Source:TRNASCAN_SE%3BAcc:tRNA-Gln];external_name=tRNA-Gln;logic_name=ncrna_eg chr4 ensembl transcript 2223710 2223781 . - . ID=EPrTPOT00000000045;Parent=EPrTPOG00000000045;biotype=tRNA;logic_name=ncrna_eg chr4 . exon 2223710 2223781 . - . ID=EPrTPOE00000000045;Parent=EPrTPOT00000000045;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2224899 2225204 . + . ID=Thaps19099;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0M4];external_name=Thaps19099;logic_name=jgi_thaps3 chr4 ensembl transcript 2224899 2225204 . + . ID=Thaps19099;Parent=Thaps19099;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2224899 2225204 . + 0 ID=Thaps19099;Parent=Thaps19099;rank=1 chr4 . exon 2224899 2225204 . + . ID=Thaps19099.1;Parent=Thaps19099;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2230399 2233707 . + . ID=Thaps22484;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0M6];external_name=Thaps22484;logic_name=jgi_thaps3 chr4 ensembl transcript 2230399 2233707 . + . ID=Thaps22484;Parent=Thaps22484;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2230399 2233333 . + 0 ID=Thaps22484;Parent=Thaps22484;rank=1 chr4 . exon 2230399 2233333 . + . ID=Thaps22484.1;Parent=Thaps22484;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2233415 2233707 . + 0 ID=Thaps22484;Parent=Thaps22484;rank=2 chr4 ensembl protein_coding_gene 2227103 2229157 . - . ID=Thaps4903;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0M5];external_name=Thaps4903;logic_name=jgi_thaps3 chr4 ensembl transcript 2227103 2229157 . - . ID=Thaps4903;Parent=Thaps4903;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2227103 2229157 . - 0 ID=Thaps4903;Parent=Thaps4903;rank=1 chr4 . exon 2227103 2229157 . - . ID=Thaps4903.1;Parent=Thaps4903;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2237735 2238491 . - . ID=Thaps18557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0M8];external_name=Thaps18557;logic_name=jgi_thaps3 chr4 ensembl transcript 2237735 2238491 . - . ID=Thaps18557;Parent=Thaps18557;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2237735 2238051 . - 0 ID=Thaps18557;Parent=Thaps18557;rank=3 chr4 . exon 2237735 2238051 . - . ID=Thaps18557.3;Parent=Thaps18557;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2238118 2238327 . - 0 ID=Thaps18557;Parent=Thaps18557;rank=2 chr4 . exon 2238118 2238327 . - . ID=Thaps18557.2;Parent=Thaps18557;constitutive=1;rank=2 chr4 . CDS 2238410 2238491 . - 0 ID=Thaps18557;Parent=Thaps18557;rank=1 chr4 . exon 2238410 2238491 . - . ID=Thaps18557.1;Parent=Thaps18557;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . exon 2233415 2233707 . + . ID=Thaps22484.2;Parent=Thaps22484;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 2242465 2244559 . + . ID=Thaps262343;biotype=protein_coding;description=Beta-mannosidase [Source:UniProtKB/TrEMBL%3BAcc:B8C0M9];external_name=Thaps262343;logic_name=jgi_thaps3 chr4 ensembl transcript 2242465 2244559 . + . ID=Thaps262343;Parent=Thaps262343;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2242465 2243212 . + 0 ID=Thaps262343;Parent=Thaps262343;rank=1 chr4 . exon 2242465 2243212 . + . ID=Thaps262343.1;Parent=Thaps262343;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2243294 2244559 . + 0 ID=Thaps262343;Parent=Thaps262343;rank=2 chr4 ensembl protein_coding_gene 2234111 2235949 . - . ID=Thaps40529;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0M7];external_name=Thaps40529;logic_name=jgi_thaps3 chr4 ensembl transcript 2234111 2235949 . - . ID=Thaps40529;Parent=Thaps40529;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2234111 2235253 . - 0 ID=Thaps40529;Parent=Thaps40529;rank=2 chr4 . exon 2234111 2235253 . - . ID=Thaps40529.2;Parent=Thaps40529;constitutive=1;rank=2 chr4 . CDS 2235347 2235949 . - 0 ID=Thaps40529;Parent=Thaps40529;rank=1 chr4 . exon 2235347 2235949 . - . ID=Thaps40529.1;Parent=Thaps40529;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2250422 2252170 . - . ID=Thaps22486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0N3];external_name=Thaps22486;logic_name=jgi_thaps3 chr4 ensembl transcript 2250422 2252170 . - . ID=Thaps22486;Parent=Thaps22486;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2250422 2252170 . - 0 ID=Thaps22486;Parent=Thaps22486;rank=1 chr4 . exon 2250422 2252170 . - . ID=Thaps22486.1;Parent=Thaps22486;constitutive=1;rank=1 chr4 . exon 2243294 2244559 . + . ID=Thaps262343.2;Parent=Thaps262343;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 2245608 2246957 . - . ID=Thaps4907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0N0];external_name=Thaps4907;logic_name=jgi_thaps3 chr4 ensembl transcript 2245608 2246957 . - . ID=Thaps4907;Parent=Thaps4907;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2245608 2245613 . - 0 ID=Thaps4907;Parent=Thaps4907;rank=3 chr4 . exon 2245608 2245613 . - . ID=Thaps4907.3;Parent=Thaps4907;constitutive=1;rank=3 chr4 . CDS 2245646 2246793 . - 0 ID=Thaps4907;Parent=Thaps4907;rank=2 chr4 . exon 2245646 2246793 . - . ID=Thaps4907.2;Parent=Thaps4907;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2246834 2246957 . - 0 ID=Thaps4907;Parent=Thaps4907;rank=1 chr4 . exon 2246834 2246957 . - . ID=Thaps4907.1;Parent=Thaps4907;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2247161 2248855 . + . ID=Thaps4908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0N1];external_name=Thaps4908;logic_name=jgi_thaps3 chr4 ensembl transcript 2247161 2248855 . + . ID=Thaps4908;Parent=Thaps4908;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2247161 2248855 . + 0 ID=Thaps4908;Parent=Thaps4908;rank=1 chr4 . exon 2247161 2248855 . + . ID=Thaps4908.1;Parent=Thaps4908;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2249089 2250328 . + . ID=Thaps4909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0N2];external_name=Thaps4909;logic_name=jgi_thaps3 chr4 ensembl transcript 2249089 2250328 . + . ID=Thaps4909;Parent=Thaps4909;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2249089 2249518 . + 0 ID=Thaps4909;Parent=Thaps4909;rank=1 chr4 . exon 2249089 2249518 . + . ID=Thaps4909.1;Parent=Thaps4909;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2249555 2249690 . + 0 ID=Thaps4909;Parent=Thaps4909;rank=2 chr4 . exon 2249555 2249690 . + . ID=Thaps4909.2;Parent=Thaps4909;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2249726 2249756 . + 0 ID=Thaps4909;Parent=Thaps4909;rank=3 chr4 . exon 2249726 2249756 . + . ID=Thaps4909.3;Parent=Thaps4909;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2249804 2250328 . + 0 ID=Thaps4909;Parent=Thaps4909;rank=4 chr4 . exon 2249804 2250328 . + . ID=Thaps4909.4;Parent=Thaps4909;constitutive=1;rank=4 chr4 . repeat_region 2253330 2253383 . ? . description=trf chr4 . repeat_region 2256996 2257035 . ? . description=dust chr4 . repeat_region 2257511 2257520 . ? . description=dust chr4 ensembl protein_coding_gene 2253258 2255794 . - . ID=Thaps22487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0N4];external_name=Thaps22487;logic_name=jgi_thaps3 chr4 ensembl transcript 2253258 2255794 . - . ID=Thaps22487;Parent=Thaps22487;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2253258 2253500 . - 0 ID=Thaps22487;Parent=Thaps22487;rank=2 chr4 . exon 2253258 2253500 . - . ID=Thaps22487.2;Parent=Thaps22487;constitutive=1;rank=2 chr4 . CDS 2253656 2255794 . - 0 ID=Thaps22487;Parent=Thaps22487;rank=1 chr4 . exon 2253656 2255794 . - . ID=Thaps22487.1;Parent=Thaps22487;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2256369 2257100 . + . ID=Thaps22488;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0N5];external_name=Thaps22488;logic_name=jgi_thaps3 chr4 ensembl transcript 2256369 2257100 . + . ID=Thaps22488;Parent=Thaps22488;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2256369 2257100 . + 0 ID=Thaps22488;Parent=Thaps22488;rank=1 chr4 . exon 2256369 2257100 . + . ID=Thaps22488.1;Parent=Thaps22488;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2257620 2258611 . - . ID=Thaps33500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0N6];external_name=Thaps33500;logic_name=jgi_thaps3 chr4 ensembl transcript 2257620 2258611 . - . ID=Thaps33500;Parent=Thaps33500;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2257620 2257898 . - 0 ID=Thaps33500;Parent=Thaps33500;rank=2 chr4 . exon 2257620 2257898 . - . ID=Thaps33500.2;Parent=Thaps33500;constitutive=1;rank=2 chr4 . CDS 2258030 2258611 . - 0 ID=Thaps33500;Parent=Thaps33500;rank=1 chr4 . exon 2258030 2258611 . - . ID=Thaps33500.1;Parent=Thaps33500;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2260019 2262148 . - . ID=Thaps4914;biotype=protein_coding;description=Ferredoxin--NADP reductase [Source:UniProtKB/TrEMBL%3BAcc:B8C0N7];external_name=Thaps4914;logic_name=jgi_thaps3 chr4 ensembl transcript 2260019 2262148 . - . ID=Thaps4914;Parent=Thaps4914;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2260019 2260774 . - 0 ID=Thaps4914;Parent=Thaps4914;rank=3 chr4 . exon 2260019 2260774 . - . ID=Thaps4914.3;Parent=Thaps4914;constitutive=1;rank=3 chr4 . CDS 2260887 2261180 . - 0 ID=Thaps4914;Parent=Thaps4914;rank=2 chr4 . exon 2260887 2261180 . - . ID=Thaps4914.2;Parent=Thaps4914;constitutive=1;rank=2 chr4 . CDS 2262113 2262148 . - 0 ID=Thaps4914;Parent=Thaps4914;rank=1 chr4 . exon 2262113 2262148 . - . ID=Thaps4914.1;Parent=Thaps4914;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2262318 2263215 . + . ID=Thaps4915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0N8];external_name=Thaps4915;logic_name=jgi_thaps3 chr4 ensembl transcript 2262318 2263215 . + . ID=Thaps4915;Parent=Thaps4915;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2262318 2262673 . + 0 ID=Thaps4915;Parent=Thaps4915;rank=1 chr4 . exon 2262318 2262673 . + . ID=Thaps4915.1;Parent=Thaps4915;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 2262777 2263215 . + 0 ID=Thaps4915;Parent=Thaps4915;rank=2 chr4 . exon 2262777 2263215 . + . ID=Thaps4915.2;Parent=Thaps4915;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . repeat_region 2264557 2264643 . + . description=TE2c_TP chr4 . repeat_region 2264950 2265349 . + . description=TE2c_TP chr4 . repeat_region 2272283 2275273 . - . description=Harbinger4_TP chr4 ensembl tRNA_gene 2265458 2265529 . - . ID=EPrTPOG00000000074;biotype=tRNA;description=tRNA-Asp for anticodon GUC [Source:TRNASCAN_SE%3BAcc:tRNA-Asp];external_name=tRNA-Asp;logic_name=ncrna_eg chr4 ensembl transcript 2265458 2265529 . - . ID=EPrTPOT00000000074;Parent=EPrTPOG00000000074;biotype=tRNA;logic_name=ncrna_eg chr4 . exon 2265458 2265529 . - . ID=EPrTPOE00000000074;Parent=EPrTPOT00000000074;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2268500 2270388 . - . ID=Thaps22490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0P1];external_name=Thaps22490;logic_name=jgi_thaps3 chr4 ensembl transcript 2268500 2270388 . - . ID=Thaps22490;Parent=Thaps22490;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2268500 2269403 . - 0 ID=Thaps22490;Parent=Thaps22490;rank=2 chr4 . exon 2268500 2269403 . - . ID=Thaps22490.2;Parent=Thaps22490;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2269487 2270388 . - 0 ID=Thaps22490;Parent=Thaps22490;rank=1 chr4 . exon 2269487 2270388 . - . ID=Thaps22490.1;Parent=Thaps22490;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 2263280 2264945 . - . ID=Thaps4916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0N9];external_name=Thaps4916;logic_name=jgi_thaps3 chr4 ensembl transcript 2263280 2264945 . - . ID=Thaps4916;Parent=Thaps4916;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2263280 2264268 . - 0 ID=Thaps4916;Parent=Thaps4916;rank=2 chr4 . exon 2263280 2264268 . - . ID=Thaps4916.2;Parent=Thaps4916;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2264693 2264945 . - 0 ID=Thaps4916;Parent=Thaps4916;rank=1 chr4 . exon 2264693 2264945 . - . ID=Thaps4916.1;Parent=Thaps4916;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2265767 2267530 . + . ID=Thaps4917;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0P0];external_name=Thaps4917;logic_name=jgi_thaps3 chr4 ensembl transcript 2265767 2267530 . + . ID=Thaps4917;Parent=Thaps4917;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2265767 2267530 . + 0 ID=Thaps4917;Parent=Thaps4917;rank=1 chr4 . exon 2265767 2267530 . + . ID=Thaps4917.1;Parent=Thaps4917;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2271269 2271853 . + . ID=Thaps4919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0P2];external_name=Thaps4919;logic_name=jgi_thaps3 chr4 ensembl transcript 2271269 2271853 . + . ID=Thaps4919;Parent=Thaps4919;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2271269 2271853 . + 0 ID=Thaps4919;Parent=Thaps4919;rank=1 chr4 . exon 2271269 2271853 . + . ID=Thaps4919.1;Parent=Thaps4919;constitutive=1;rank=1 chr4 . repeat_region 2273974 2274015 . ? . description=trf chr4 . repeat_region 2282510 2282540 . ? . description=trf chr4 ensembl protein_coding_gene 2275917 2281499 . + . ID=Thaps4920;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0P3];external_name=Thaps4920;logic_name=jgi_thaps3 chr4 ensembl transcript 2275917 2281499 . + . ID=Thaps4920;Parent=Thaps4920;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2275917 2281499 . + 0 ID=Thaps4920;Parent=Thaps4920;rank=1 chr4 . exon 2275917 2281499 . + . ID=Thaps4920.1;Parent=Thaps4920;constitutive=1;rank=1 chr4 . repeat_region 2292341 2292366 . ? . description=dust chr4 . repeat_region 2292798 2292823 . ? . description=dust chr4 ensembl protein_coding_gene 2283797 2285899 . - . ID=Thaps4921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0P4];external_name=Thaps4921;logic_name=jgi_thaps3 chr4 ensembl transcript 2283797 2285899 . - . ID=Thaps4921;Parent=Thaps4921;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2283797 2285899 . - 0 ID=Thaps4921;Parent=Thaps4921;rank=1 chr4 . exon 2283797 2285899 . - . ID=Thaps4921.1;Parent=Thaps4921;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2286639 2291378 . + . ID=Thaps4922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0P5];external_name=Thaps4922;logic_name=jgi_thaps3 chr4 ensembl transcript 2286639 2291378 . + . ID=Thaps4922;Parent=Thaps4922;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2286639 2288476 . + 0 ID=Thaps4922;Parent=Thaps4922;rank=1 chr4 . exon 2286639 2288476 . + . ID=Thaps4922.1;Parent=Thaps4922;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 2288550 2288602 . + 0 ID=Thaps4922;Parent=Thaps4922;rank=2 chr4 . exon 2288550 2288602 . + . ID=Thaps4922.2;Parent=Thaps4922;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2288682 2289266 . + 0 ID=Thaps4922;Parent=Thaps4922;rank=3 chr4 . exon 2288682 2289266 . + . ID=Thaps4922.3;Parent=Thaps4922;constitutive=1;rank=3 chr4 . CDS 2289353 2290704 . + 0 ID=Thaps4922;Parent=Thaps4922;rank=4 chr4 . exon 2289353 2290704 . + . ID=Thaps4922.4;Parent=Thaps4922;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . CDS 2290782 2291378 . + 0 ID=Thaps4922;Parent=Thaps4922;rank=5 chr4 . exon 2290782 2291378 . + . ID=Thaps4922.5;Parent=Thaps4922;constitutive=1;rank=5 chr4 ensembl protein_coding_gene 2302078 2302917 . + . ID=Thaps262348;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0P9];external_name=Thaps262348;logic_name=jgi_thaps3 chr4 ensembl transcript 2302078 2302917 . + . ID=Thaps262348;Parent=Thaps262348;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2302078 2302508 . + 0 ID=Thaps262348;Parent=Thaps262348;rank=1 chr4 . exon 2302078 2302508 . + . ID=Thaps262348.1;Parent=Thaps262348;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 2302602 2302917 . + 0 ID=Thaps262348;Parent=Thaps262348;rank=2 chr4 . exon 2302602 2302917 . + . ID=Thaps262348.2;Parent=Thaps262348;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 2293792 2295870 . + . ID=Thaps268793;biotype=protein_coding;description=Ammonium transporter [Source:UniProtKB/TrEMBL%3BAcc:B8C0P7];external_name=AMT6;logic_name=jgi_thaps3 chr4 ensembl transcript 2293792 2295870 . + . ID=Thaps268793;Parent=Thaps268793;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2293792 2294586 . + 0 ID=Thaps268793;Parent=Thaps268793;rank=1 chr4 . exon 2293792 2294586 . + . ID=Thaps268793.1;Parent=Thaps268793;constitutive=1;rank=1 chr4 . CDS 2294695 2294935 . + 0 ID=Thaps268793;Parent=Thaps268793;rank=2 chr4 . exon 2294695 2294935 . + . ID=Thaps268793.2;Parent=Thaps268793;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2295032 2295395 . + 0 ID=Thaps268793;Parent=Thaps268793;rank=3 chr4 . exon 2295032 2295395 . + . ID=Thaps268793.3;Parent=Thaps268793;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2295480 2295870 . + 0 ID=Thaps268793;Parent=Thaps268793;rank=4 chr4 . exon 2295480 2295870 . + . ID=Thaps268793.4;Parent=Thaps268793;constitutive=1;ensembl_end_phase=1;rank=4 chr4 ensembl protein_coding_gene 2297185 2298938 . + . ID=Thaps33663;biotype=protein_coding;description=Glucose-6-phosphate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8C0P8];external_name=Thaps33663;logic_name=jgi_thaps3 chr4 ensembl transcript 2297185 2298938 . + . ID=Thaps33663;Parent=Thaps33663;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2297185 2298093 . + 0 ID=Thaps33663;Parent=Thaps33663;rank=1 chr4 . exon 2297185 2298093 . + . ID=Thaps33663.1;Parent=Thaps33663;constitutive=1;rank=1 chr4 . CDS 2298180 2298938 . + 0 ID=Thaps33663;Parent=Thaps33663;rank=2 chr4 . exon 2298180 2298938 . + . ID=Thaps33663.2;Parent=Thaps33663;constitutive=1;rank=2 chr4 ensembl protein_coding_gene 2293028 2293462 . - . ID=Thaps4923;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0P6];external_name=Thaps4923;logic_name=jgi_thaps3 chr4 ensembl transcript 2293028 2293462 . - . ID=Thaps4923;Parent=Thaps4923;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2293028 2293462 . - 0 ID=Thaps4923;Parent=Thaps4923;rank=1 chr4 . exon 2293028 2293462 . - . ID=Thaps4923.1;Parent=Thaps4923;constitutive=1;rank=1 chr4 . repeat_region 2303484 2303496 . ? . description=dust chr4 . repeat_region 2312741 2312762 . ? . description=trf chr4 . repeat_region 2312741 2312762 . ? . description=dust chr4 ensembl protein_coding_gene 2306899 2308296 . - . ID=Thaps40537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q0];external_name=Thaps40537;logic_name=jgi_thaps3 chr4 ensembl transcript 2306899 2308296 . - . ID=Thaps40537;Parent=Thaps40537;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2306899 2307266 . - 0 ID=Thaps40537;Parent=Thaps40537;rank=3 chr4 . exon 2306899 2307266 . - . ID=Thaps40537.3;Parent=Thaps40537;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2307348 2307588 . - 0 ID=Thaps40537;Parent=Thaps40537;rank=2 chr4 . exon 2307348 2307588 . - . ID=Thaps40537.2;Parent=Thaps40537;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2307697 2308296 . - 0 ID=Thaps40537;Parent=Thaps40537;rank=1 chr4 . exon 2307697 2308296 . - . ID=Thaps40537.1;Parent=Thaps40537;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2313995 2316082 . + . ID=Thaps22494;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q1];external_name=Thaps22494;logic_name=jgi_thaps3 chr4 ensembl transcript 2313995 2316082 . + . ID=Thaps22494;Parent=Thaps22494;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2313995 2316082 . + 0 ID=Thaps22494;Parent=Thaps22494;rank=1 chr4 . exon 2313995 2316082 . + . ID=Thaps22494.1;Parent=Thaps22494;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2316752 2318224 . + . ID=Thaps22495;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q2];external_name=Thaps22495;logic_name=jgi_thaps3 chr4 ensembl transcript 2316752 2318224 . + . ID=Thaps22495;Parent=Thaps22495;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2316752 2317078 . + 0 ID=Thaps22495;Parent=Thaps22495;rank=1 chr4 . exon 2316752 2317078 . + . ID=Thaps22495.1;Parent=Thaps22495;constitutive=1;rank=1 chr4 . CDS 2317159 2317923 . + 0 ID=Thaps22495;Parent=Thaps22495;rank=2 chr4 . exon 2317159 2317923 . + . ID=Thaps22495.2;Parent=Thaps22495;constitutive=1;rank=2 chr4 . CDS 2317952 2318224 . + 0 ID=Thaps22495;Parent=Thaps22495;rank=3 chr4 . exon 2317952 2318224 . + . ID=Thaps22495.3;Parent=Thaps22495;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 2322191 2322952 . - . ID=Thaps22497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q4];external_name=Thaps22497;logic_name=jgi_thaps3 chr4 ensembl transcript 2322191 2322952 . - . ID=Thaps22497;Parent=Thaps22497;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2322191 2322952 . - 0 ID=Thaps22497;Parent=Thaps22497;rank=1 chr4 . exon 2322191 2322952 . - . ID=Thaps22497.1;Parent=Thaps22497;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2318582 2319436 . + . ID=Thaps26224;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q3];external_name=Thaps26224;logic_name=jgi_thaps3 chr4 ensembl transcript 2318582 2319436 . + . ID=Thaps26224;Parent=Thaps26224;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2318582 2319436 . + 0 ID=Thaps26224;Parent=Thaps26224;rank=1 chr4 . exon 2318582 2319436 . + . ID=Thaps26224.1;Parent=Thaps26224;constitutive=1;rank=1 chr4 . repeat_region 2327250 2327258 . ? . description=dust chr4 . repeat_region 2332605 2332632 . ? . description=trf chr4 . repeat_region 2332605 2332632 . ? . description=dust chr4 ensembl protein_coding_gene 2328589 2329599 . + . ID=Thaps22498;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q6];external_name=Thaps22498;logic_name=jgi_thaps3 chr4 ensembl transcript 2328589 2329599 . + . ID=Thaps22498;Parent=Thaps22498;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2328589 2329599 . + 0 ID=Thaps22498;Parent=Thaps22498;rank=1 chr4 . exon 2328589 2329599 . + . ID=Thaps22498.1;Parent=Thaps22498;constitutive=1;rank=1 chr4 ensembl gene 2326460 2327932 . - . ID=Thaps262350;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr4 ensembl transcript 2326460 2327932 . - . ID=Thaps262350;Parent=Thaps262350;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr4 . exon 2326460 2326995 . - . ID=Thaps262350.3;Parent=Thaps262350;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . exon 2327050 2327464 . - . ID=Thaps262350.2;Parent=Thaps262350;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . exon 2327574 2327932 . - . ID=Thaps262350.1;Parent=Thaps262350;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 2323547 2323762 . + . ID=Thaps33906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q5];external_name=Thaps33906;logic_name=jgi_thaps3 chr4 ensembl transcript 2323547 2323762 . + . ID=Thaps33906;Parent=Thaps33906;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2323547 2323762 . + 0 ID=Thaps33906;Parent=Thaps33906;rank=1 chr4 . exon 2323547 2323762 . + . ID=Thaps33906.1;Parent=Thaps33906;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2330109 2331319 . + . ID=Thaps4936;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q7];external_name=Thaps4936;logic_name=jgi_thaps3 chr4 ensembl transcript 2330109 2331319 . + . ID=Thaps4936;Parent=Thaps4936;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2330109 2330244 . + 0 ID=Thaps4936;Parent=Thaps4936;rank=1 chr4 . exon 2330109 2330244 . + . ID=Thaps4936.1;Parent=Thaps4936;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2330340 2331319 . + 0 ID=Thaps4936;Parent=Thaps4936;rank=2 chr4 . exon 2330340 2331319 . + . ID=Thaps4936.2;Parent=Thaps4936;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 2331568 2334949 . + . ID=Thaps4937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q8];external_name=Thaps4937;logic_name=jgi_thaps3 chr4 ensembl transcript 2331568 2334949 . + . ID=Thaps4937;Parent=Thaps4937;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2331568 2334276 . + 0 ID=Thaps4937;Parent=Thaps4937;rank=1 chr4 . exon 2331568 2334276 . + . ID=Thaps4937.1;Parent=Thaps4937;constitutive=1;rank=1 chr4 . CDS 2334353 2334565 . + 0 ID=Thaps4937;Parent=Thaps4937;rank=2 chr4 . CDS 2334641 2334949 . + 0 ID=Thaps4937;Parent=Thaps4937;rank=3 chr4 ensembl protein_coding_gene 2337603 2339783 . + . ID=Thaps22499;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0R0];external_name=Thaps22499;logic_name=jgi_thaps3 chr4 ensembl transcript 2337603 2339783 . + . ID=Thaps22499;Parent=Thaps22499;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2337603 2337749 . + 0 ID=Thaps22499;Parent=Thaps22499;rank=1 chr4 . exon 2337603 2337749 . + . ID=Thaps22499.1;Parent=Thaps22499;constitutive=1;rank=1 chr4 . CDS 2337850 2338076 . + 0 ID=Thaps22499;Parent=Thaps22499;rank=2 chr4 . exon 2337850 2338076 . + . ID=Thaps22499.2;Parent=Thaps22499;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2338115 2339783 . + 0 ID=Thaps22499;Parent=Thaps22499;rank=3 chr4 . exon 2338115 2339783 . + . ID=Thaps22499.3;Parent=Thaps22499;constitutive=1;ensembl_end_phase=1;rank=3 chr4 ensembl protein_coding_gene 2342290 2346519 . - . ID=Thaps262352;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0R2];external_name=Thaps262352;logic_name=jgi_thaps3 chr4 ensembl transcript 2342290 2346519 . - . ID=Thaps262352;Parent=Thaps262352;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2342290 2343219 . - 0 ID=Thaps262352;Parent=Thaps262352;rank=7 chr4 . exon 2342290 2343219 . - . ID=Thaps262352.7;Parent=Thaps262352;constitutive=1;rank=7 chr4 . CDS 2343429 2343619 . - 0 ID=Thaps262352;Parent=Thaps262352;rank=6 chr4 . CDS 2343758 2344316 . - 0 ID=Thaps262352;Parent=Thaps262352;rank=5 chr4 . CDS 2344404 2344854 . - 0 ID=Thaps262352;Parent=Thaps262352;rank=4 chr4 . CDS 2344942 2345021 . - 0 ID=Thaps262352;Parent=Thaps262352;rank=3 chr4 . CDS 2345101 2345814 . - 0 ID=Thaps262352;Parent=Thaps262352;rank=2 chr4 . CDS 2345977 2346519 . - 0 ID=Thaps262352;Parent=Thaps262352;rank=1 chr4 . exon 2334353 2334565 . + . ID=Thaps4937.2;Parent=Thaps4937;constitutive=1;rank=2 chr4 . exon 2334641 2334949 . + . ID=Thaps4937.3;Parent=Thaps4937;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 2335091 2336509 . - . ID=Thaps4938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0Q9];external_name=Thaps4938;logic_name=jgi_thaps3 chr4 ensembl transcript 2335091 2336509 . - . ID=Thaps4938;Parent=Thaps4938;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2335091 2335643 . - 0 ID=Thaps4938;Parent=Thaps4938;rank=2 chr4 . exon 2335091 2335643 . - . ID=Thaps4938.2;Parent=Thaps4938;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2335686 2336509 . - 0 ID=Thaps4938;Parent=Thaps4938;rank=1 chr4 . exon 2335686 2336509 . - . ID=Thaps4938.1;Parent=Thaps4938;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 2340576 2342222 . + . ID=Thaps4940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0R1];external_name=Thaps4940;logic_name=jgi_thaps3 chr4 ensembl transcript 2340576 2342222 . + . ID=Thaps4940;Parent=Thaps4940;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2340576 2342222 . + 0 ID=Thaps4940;Parent=Thaps4940;rank=1 chr4 . exon 2340576 2342222 . + . ID=Thaps4940.1;Parent=Thaps4940;constitutive=1;rank=1 chr4 . repeat_region 2347320 2347343 . ? . description=trf chr4 . repeat_region 2347320 2347343 . ? . description=dust chr4 . exon 2343429 2343619 . - . ID=Thaps262352.6;Parent=Thaps262352;constitutive=1;ensembl_end_phase=2;rank=6 chr4 . exon 2343758 2344316 . - . ID=Thaps262352.5;Parent=Thaps262352;constitutive=1;ensembl_end_phase=1;rank=5 chr4 . exon 2344404 2344854 . - . ID=Thaps262352.4;Parent=Thaps262352;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . exon 2344942 2345021 . - . ID=Thaps262352.3;Parent=Thaps262352;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . exon 2345101 2345814 . - . ID=Thaps262352.2;Parent=Thaps262352;constitutive=1;rank=2 chr4 . exon 2345977 2346519 . - . ID=Thaps262352.1;Parent=Thaps262352;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2351634 2353431 . - . ID=Thaps28125;biotype=protein_coding;description=Glutamyl-tRNA reductase [Source:UniProtKB/TrEMBL%3BAcc:B8C0R5];external_name=Thaps28125;logic_name=jgi_thaps3 chr4 ensembl transcript 2351634 2353431 . - . ID=Thaps28125;Parent=Thaps28125;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2351634 2352071 . - 0 ID=Thaps28125;Parent=Thaps28125;rank=3 chr4 . exon 2351634 2352071 . - . ID=Thaps28125.3;Parent=Thaps28125;constitutive=1;rank=3 chr4 . CDS 2352159 2353082 . - 0 ID=Thaps28125;Parent=Thaps28125;rank=2 chr4 . exon 2352159 2353082 . - . ID=Thaps28125.2;Parent=Thaps28125;constitutive=1;rank=2 chr4 . CDS 2353348 2353431 . - 0 ID=Thaps28125;Parent=Thaps28125;rank=1 chr4 ensembl protein_coding_gene 2350119 2351349 . + . ID=Thaps33680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0R4];external_name=Thaps33680;logic_name=jgi_thaps3 chr4 ensembl transcript 2350119 2351349 . + . ID=Thaps33680;Parent=Thaps33680;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2350119 2350285 . + 0 ID=Thaps33680;Parent=Thaps33680;rank=1 chr4 . exon 2350119 2350285 . + . ID=Thaps33680.1;Parent=Thaps33680;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 2350410 2351349 . + 0 ID=Thaps33680;Parent=Thaps33680;rank=2 chr4 . exon 2350410 2351349 . + . ID=Thaps33680.2;Parent=Thaps33680;constitutive=1;ensembl_end_phase=1;rank=2 chr4 ensembl protein_coding_gene 2347735 2348340 . - . ID=Thaps46;biotype=protein_coding;description=RL13A%2C ribosomal protein 13A 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8C0R3];external_name=RL13A;logic_name=jgi_thaps3 chr4 ensembl transcript 2347735 2348340 . - . ID=Thaps46;Parent=Thaps46;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2347735 2348340 . - 0 ID=Thaps46;Parent=Thaps46;rank=1 chr4 . exon 2347735 2348340 . - . ID=Thaps46.1;Parent=Thaps46;constitutive=1;rank=1 chr4 . exon 2353348 2353431 . - . ID=Thaps28125.1;Parent=Thaps28125;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2354671 2356931 . + . ID=Thaps4946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0R6];external_name=Thaps4946;logic_name=jgi_thaps3 chr4 ensembl transcript 2354671 2356931 . + . ID=Thaps4946;Parent=Thaps4946;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2354671 2355604 . + 0 ID=Thaps4946;Parent=Thaps4946;rank=1 chr4 . exon 2354671 2355604 . + . ID=Thaps4946.1;Parent=Thaps4946;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2355890 2355943 . + 0 ID=Thaps4946;Parent=Thaps4946;rank=2 chr4 . exon 2355890 2355943 . + . ID=Thaps4946.2;Parent=Thaps4946;constitutive=1;rank=2 chr4 . CDS 2356279 2356931 . + 0 ID=Thaps4946;Parent=Thaps4946;rank=3 chr4 . exon 2356279 2356931 . + . ID=Thaps4946.3;Parent=Thaps4946;constitutive=1;ensembl_end_phase=2;rank=3 chr4 ensembl protein_coding_gene 2357365 2360527 . - . ID=Thaps4947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0R7];external_name=Thaps4947;logic_name=jgi_thaps3 chr4 ensembl transcript 2357365 2360527 . - . ID=Thaps4947;Parent=Thaps4947;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2357365 2358270 . - 0 ID=Thaps4947;Parent=Thaps4947;rank=3 chr4 . exon 2357365 2358270 . - . ID=Thaps4947.3;Parent=Thaps4947;constitutive=1;rank=3 chr4 . CDS 2358357 2358484 . - 0 ID=Thaps4947;Parent=Thaps4947;rank=2 chr4 . exon 2358357 2358484 . - . ID=Thaps4947.2;Parent=Thaps4947;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2358562 2360527 . - 0 ID=Thaps4947;Parent=Thaps4947;rank=1 chr4 . exon 2358562 2360527 . - . ID=Thaps4947.1;Parent=Thaps4947;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2360950 2362392 . + . ID=Thaps4948;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0R8];external_name=Thaps4948;logic_name=jgi_thaps3 chr4 ensembl transcript 2360950 2362392 . + . ID=Thaps4948;Parent=Thaps4948;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2360950 2362135 . + 0 ID=Thaps4948;Parent=Thaps4948;rank=1 chr4 . exon 2360950 2362135 . + . ID=Thaps4948.1;Parent=Thaps4948;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2362223 2362392 . + 0 ID=Thaps4948;Parent=Thaps4948;rank=2 chr4 . exon 2362223 2362392 . + . ID=Thaps4948.2;Parent=Thaps4948;constitutive=1;ensembl_end_phase=2;rank=2 chr4 ensembl protein_coding_gene 2362848 2368831 . - . ID=Thaps22505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0R9];external_name=Thaps22505;logic_name=jgi_thaps3 chr4 ensembl transcript 2362848 2368831 . - . ID=Thaps22505;Parent=Thaps22505;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2362848 2363715 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=15 chr4 . exon 2362848 2363715 . - . ID=Thaps22505.15;Parent=Thaps22505;constitutive=1;ensembl_end_phase=1;rank=15 chr4 . CDS 2363786 2364172 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=14 chr4 . exon 2363786 2364172 . - . ID=Thaps22505.14;Parent=Thaps22505;constitutive=1;rank=14 chr4 . CDS 2364252 2365194 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=13 chr4 . exon 2364252 2365194 . - . ID=Thaps22505.13;Parent=Thaps22505;constitutive=1;ensembl_end_phase=1;rank=13 chr4 . CDS 2365296 2365458 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=12 chr4 . exon 2365296 2365458 . - . ID=Thaps22505.12;Parent=Thaps22505;constitutive=1;ensembl_end_phase=1;rank=12 chr4 . CDS 2365539 2365690 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=11 chr4 . exon 2365539 2365690 . - . ID=Thaps22505.11;Parent=Thaps22505;constitutive=1;ensembl_end_phase=2;rank=11 chr4 . CDS 2365990 2366037 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=10 chr4 . exon 2365990 2366037 . - . ID=Thaps22505.10;Parent=Thaps22505;constitutive=1;rank=10 chr4 . CDS 2366130 2366177 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=9 chr4 . exon 2366130 2366177 . - . ID=Thaps22505.9;Parent=Thaps22505;constitutive=1;rank=9 chr4 . CDS 2366448 2366495 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=8 chr4 . exon 2366448 2366495 . - . ID=Thaps22505.8;Parent=Thaps22505;constitutive=1;rank=8 chr4 . CDS 2366842 2366871 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=7 chr4 . exon 2366842 2366871 . - . ID=Thaps22505.7;Parent=Thaps22505;constitutive=1;rank=7 chr4 . CDS 2367272 2367305 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=6 chr4 . exon 2367272 2367305 . - . ID=Thaps22505.6;Parent=Thaps22505;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 2367588 2367635 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=5 chr4 . exon 2367588 2367635 . - . ID=Thaps22505.5;Parent=Thaps22505;constitutive=1;rank=5 chr4 . CDS 2367731 2367826 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=4 chr4 . exon 2367731 2367826 . - . ID=Thaps22505.4;Parent=Thaps22505;constitutive=1;rank=4 chr4 . CDS 2368012 2368055 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=3 chr4 . exon 2368012 2368055 . - . ID=Thaps22505.3;Parent=Thaps22505;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2368138 2368287 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=2 chr4 . exon 2368138 2368287 . - . ID=Thaps22505.2;Parent=Thaps22505;constitutive=1;rank=2 chr4 . CDS 2368321 2368831 . - 0 ID=Thaps22505;Parent=Thaps22505;rank=1 chr4 . exon 2368321 2368831 . - . ID=Thaps22505.1;Parent=Thaps22505;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2369500 2374124 . - . ID=Thaps22506;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0S0];external_name=Thaps22506;logic_name=jgi_thaps3 chr4 ensembl transcript 2369500 2374124 . - . ID=Thaps22506;Parent=Thaps22506;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2369500 2369550 . - 0 ID=Thaps22506;Parent=Thaps22506;rank=5 chr4 . exon 2369500 2369550 . - . ID=Thaps22506.5;Parent=Thaps22506;constitutive=1;rank=5 chr4 . CDS 2369649 2370299 . - 0 ID=Thaps22506;Parent=Thaps22506;rank=4 chr4 . exon 2369649 2370299 . - . ID=Thaps22506.4;Parent=Thaps22506;constitutive=1;rank=4 chr4 . CDS 2370383 2371116 . - 0 ID=Thaps22506;Parent=Thaps22506;rank=3 chr4 . exon 2370383 2371116 . - . ID=Thaps22506.3;Parent=Thaps22506;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2371195 2373790 . - 0 ID=Thaps22506;Parent=Thaps22506;rank=2 chr4 . exon 2371195 2373790 . - . ID=Thaps22506.2;Parent=Thaps22506;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2373891 2374124 . - 0 ID=Thaps22506;Parent=Thaps22506;rank=1 chr4 . repeat_region 2373497 2373547 . ? . description=dust chr4 . repeat_region 2375217 2375267 . ? . description=dust chr4 . repeat_region 2379725 2379788 . ? . description=dust chr4 . repeat_region 2382469 2382482 . ? . description=dust chr4 . exon 2373891 2374124 . - . ID=Thaps22506.1;Parent=Thaps22506;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2375316 2377742 . + . ID=Thaps22507;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0S1];external_name=Thaps22507;logic_name=jgi_thaps3 chr4 ensembl transcript 2375316 2377742 . + . ID=Thaps22507;Parent=Thaps22507;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2375316 2376716 . + 0 ID=Thaps22507;Parent=Thaps22507;rank=1 chr4 . exon 2375316 2376716 . + . ID=Thaps22507.1;Parent=Thaps22507;constitutive=1;rank=1 chr4 . CDS 2376805 2376963 . + 0 ID=Thaps22507;Parent=Thaps22507;rank=2 chr4 . exon 2376805 2376963 . + . ID=Thaps22507.2;Parent=Thaps22507;constitutive=1;rank=2 chr4 . CDS 2377041 2377742 . + 0 ID=Thaps22507;Parent=Thaps22507;rank=3 chr4 . exon 2377041 2377742 . + . ID=Thaps22507.3;Parent=Thaps22507;constitutive=1;rank=3 chr4 ensembl protein_coding_gene 2378513 2379382 . - . ID=Thaps22508;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0S2];external_name=Thaps22508;logic_name=jgi_thaps3 chr4 ensembl transcript 2378513 2379382 . - . ID=Thaps22508;Parent=Thaps22508;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2378513 2379382 . - 0 ID=Thaps22508;Parent=Thaps22508;rank=1 chr4 . exon 2378513 2379382 . - . ID=Thaps22508.1;Parent=Thaps22508;constitutive=1;rank=1 chr4 ensembl protein_coding_gene 2381312 2384740 . + . ID=Thaps262359;biotype=protein_coding;description=Guanyl nucleotide exchange factor [Source:UniProtKB/TrEMBL%3BAcc:B8C0S3];external_name=Thaps262359;logic_name=jgi_thaps3 chr4 ensembl transcript 2381312 2384740 . + . ID=Thaps262359;Parent=Thaps262359;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2381312 2381649 . + 0 ID=Thaps262359;Parent=Thaps262359;rank=1 chr4 . exon 2381312 2381649 . + . ID=Thaps262359.1;Parent=Thaps262359;constitutive=1;ensembl_end_phase=2;rank=1 chr4 . CDS 2381747 2381903 . + 0 ID=Thaps262359;Parent=Thaps262359;rank=2 chr4 . exon 2381747 2381903 . + . ID=Thaps262359.2;Parent=Thaps262359;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2382077 2382219 . + 0 ID=Thaps262359;Parent=Thaps262359;rank=3 chr4 . exon 2382077 2382219 . + . ID=Thaps262359.3;Parent=Thaps262359;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2382406 2382483 . + 0 ID=Thaps262359;Parent=Thaps262359;rank=4 chr4 . exon 2382406 2382483 . + . ID=Thaps262359.4;Parent=Thaps262359;constitutive=1;rank=4 chr4 . CDS 2382566 2382913 . + 0 ID=Thaps262359;Parent=Thaps262359;rank=5 chr4 . exon 2382566 2382913 . + . ID=Thaps262359.5;Parent=Thaps262359;constitutive=1;rank=5 chr4 . CDS 2382980 2382984 . + 0 ID=Thaps262359;Parent=Thaps262359;rank=6 chr4 . CDS 2383048 2383598 . + 0 ID=Thaps262359;Parent=Thaps262359;rank=7 chr4 . CDS 2383767 2384083 . + 0 ID=Thaps262359;Parent=Thaps262359;rank=8 chr4 . CDS 2384171 2384740 . + 0 ID=Thaps262359;Parent=Thaps262359;rank=9 chr4 . repeat_region 2390199 2390234 . ? . description=trf chr4 . exon 2382980 2382984 . + . ID=Thaps262359.6;Parent=Thaps262359;constitutive=1;ensembl_end_phase=2;rank=6 chr4 . exon 2383048 2383598 . + . ID=Thaps262359.7;Parent=Thaps262359;constitutive=1;ensembl_end_phase=2;rank=7 chr4 . exon 2383767 2384083 . + . ID=Thaps262359.8;Parent=Thaps262359;constitutive=1;ensembl_end_phase=2;rank=8 chr4 . exon 2384171 2384740 . + . ID=Thaps262359.9;Parent=Thaps262359;constitutive=1;rank=9 chr4 ensembl protein_coding_gene 2387241 2389419 . - . ID=Thaps40554;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0S4];external_name=Thaps40554;logic_name=jgi_thaps3 chr4 ensembl transcript 2387241 2389419 . - . ID=Thaps40554;Parent=Thaps40554;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2387241 2387585 . - 0 ID=Thaps40554;Parent=Thaps40554;rank=4 chr4 . exon 2387241 2387585 . - . ID=Thaps40554.4;Parent=Thaps40554;constitutive=1;rank=4 chr4 . CDS 2387678 2387734 . - 0 ID=Thaps40554;Parent=Thaps40554;rank=3 chr4 . exon 2387678 2387734 . - . ID=Thaps40554.3;Parent=Thaps40554;constitutive=1;rank=3 chr4 . CDS 2387823 2388682 . - 0 ID=Thaps40554;Parent=Thaps40554;rank=2 chr4 . exon 2387823 2388682 . - . ID=Thaps40554.2;Parent=Thaps40554;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2388837 2389419 . - 0 ID=Thaps40554;Parent=Thaps40554;rank=1 chr4 . exon 2388837 2389419 . - . ID=Thaps40554.1;Parent=Thaps40554;constitutive=1;ensembl_end_phase=1;rank=1 chr4 ensembl protein_coding_gene 2391825 2392378 . + . ID=Thaps4955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0S5];external_name=Thaps4955;logic_name=jgi_thaps3 chr4 ensembl transcript 2391825 2392378 . + . ID=Thaps4955;Parent=Thaps4955;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2391825 2391869 . + 0 ID=Thaps4955;Parent=Thaps4955;rank=1 chr4 . exon 2391825 2391869 . + . ID=Thaps4955.1;Parent=Thaps4955;constitutive=1;rank=1 chr4 . CDS 2391902 2392027 . + 0 ID=Thaps4955;Parent=Thaps4955;rank=2 chr4 . exon 2391902 2392027 . + . ID=Thaps4955.2;Parent=Thaps4955;constitutive=1;rank=2 chr4 . CDS 2392130 2392313 . + 0 ID=Thaps4955;Parent=Thaps4955;rank=3 chr4 . exon 2392130 2392313 . + . ID=Thaps4955.3;Parent=Thaps4955;constitutive=1;ensembl_end_phase=1;rank=3 chr4 . CDS 2392350 2392378 . + 0 ID=Thaps4955;Parent=Thaps4955;rank=4 chr4 . exon 2392350 2392378 . + . ID=Thaps4955.4;Parent=Thaps4955;constitutive=1;ensembl_end_phase=2;rank=4 chr4 . repeat_region 2392877 2392900 . ? . description=dust chr4 . repeat_region 2394875 2394890 . ? . description=dust chr4 . repeat_region 2402128 2402188 . + . description=Copia6LTR_TP chr4 ensembl protein_coding_gene 2393313 2394755 . + . ID=Thaps262361;biotype=protein_coding;description=Beta-glycan assembly-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0S6];external_name=Thaps262361;logic_name=jgi_thaps3 chr4 ensembl transcript 2393313 2394755 . + . ID=Thaps262361;Parent=Thaps262361;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2393313 2393478 . + 0 ID=Thaps262361;Parent=Thaps262361;rank=1 chr4 . exon 2393313 2393478 . + . ID=Thaps262361.1;Parent=Thaps262361;constitutive=1;ensembl_end_phase=1;rank=1 chr4 . CDS 2393530 2393894 . + 0 ID=Thaps262361;Parent=Thaps262361;rank=2 chr4 . exon 2393530 2393894 . + . ID=Thaps262361.2;Parent=Thaps262361;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2393916 2394094 . + 0 ID=Thaps262361;Parent=Thaps262361;rank=3 chr4 . exon 2393916 2394094 . + . ID=Thaps262361.3;Parent=Thaps262361;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2394146 2394233 . + 0 ID=Thaps262361;Parent=Thaps262361;rank=4 chr4 . exon 2394146 2394233 . + . ID=Thaps262361.4;Parent=Thaps262361;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 2394264 2394412 . + 0 ID=Thaps262361;Parent=Thaps262361;rank=5 chr4 . exon 2394264 2394412 . + . ID=Thaps262361.5;Parent=Thaps262361;constitutive=1;ensembl_end_phase=2;rank=5 chr4 . CDS 2394437 2394446 . + 0 ID=Thaps262361;Parent=Thaps262361;rank=6 chr4 . exon 2394437 2394446 . + . ID=Thaps262361.6;Parent=Thaps262361;constitutive=1;ensembl_end_phase=1;rank=6 chr4 . CDS 2394597 2394755 . + 0 ID=Thaps262361;Parent=Thaps262361;rank=7 chr4 . exon 2394597 2394755 . + . ID=Thaps262361.7;Parent=Thaps262361;constitutive=1;rank=7 chr4 ensembl protein_coding_gene 2395093 2399781 . - . ID=Thaps4957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0S7];external_name=Thaps4957;logic_name=jgi_thaps3 chr4 ensembl transcript 2395093 2399781 . - . ID=Thaps4957;Parent=Thaps4957;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2395093 2395337 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=10 chr4 . exon 2395093 2395337 . - . ID=Thaps4957.10;Parent=Thaps4957;constitutive=1;ensembl_end_phase=2;rank=10 chr4 . CDS 2395909 2396452 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=9 chr4 . exon 2395909 2396452 . - . ID=Thaps4957.9;Parent=Thaps4957;constitutive=1;ensembl_end_phase=1;rank=9 chr4 . CDS 2396538 2396612 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=8 chr4 . exon 2396538 2396612 . - . ID=Thaps4957.8;Parent=Thaps4957;constitutive=1;rank=8 chr4 . CDS 2396764 2396862 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=7 chr4 . exon 2396764 2396862 . - . ID=Thaps4957.7;Parent=Thaps4957;constitutive=1;rank=7 chr4 . CDS 2396947 2397036 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=6 chr4 . exon 2396947 2397036 . - . ID=Thaps4957.6;Parent=Thaps4957;constitutive=1;rank=6 chr4 . CDS 2397119 2397328 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=5 chr4 . exon 2397119 2397328 . - . ID=Thaps4957.5;Parent=Thaps4957;constitutive=1;rank=5 chr4 . CDS 2397462 2397525 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=4 chr4 . exon 2397462 2397525 . - . ID=Thaps4957.4;Parent=Thaps4957;constitutive=1;ensembl_end_phase=1;rank=4 chr4 . CDS 2397579 2397625 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=3 chr4 . exon 2397579 2397625 . - . ID=Thaps4957.3;Parent=Thaps4957;constitutive=1;ensembl_end_phase=2;rank=3 chr4 . CDS 2397710 2398202 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=2 chr4 . exon 2397710 2398202 . - . ID=Thaps4957.2;Parent=Thaps4957;constitutive=1;ensembl_end_phase=1;rank=2 chr4 . CDS 2398235 2399781 . - 0 ID=Thaps4957;Parent=Thaps4957;rank=1 chr4 . exon 2398235 2399781 . - . ID=Thaps4957.1;Parent=Thaps4957;constitutive=1;ensembl_end_phase=2;rank=1 chr4 ensembl protein_coding_gene 2400411 2401268 . - . ID=Thaps4958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8C0S8];external_name=Thaps4958;logic_name=jgi_thaps3 chr4 ensembl transcript 2400411 2401268 . - . ID=Thaps4958;Parent=Thaps4958;biotype=protein_coding;logic_name=jgi_thaps3 chr4 . CDS 2400411 2400643 . - 0 ID=Thaps4958;Parent=Thaps4958;rank=2 chr4 . exon 2400411 2400643 . - . ID=Thaps4958.2;Parent=Thaps4958;constitutive=1;ensembl_end_phase=2;rank=2 chr4 . CDS 2400755 2401268 . - 0 ID=Thaps4958;Parent=Thaps4958;rank=1 chr4 . exon 2400755 2401268 . - . ID=Thaps4958.1;Parent=Thaps4958;constitutive=1;ensembl_end_phase=1;rank=1 ##gff-version 3 ##sequence-region 3 1 2440052 chr3 . repeat_region 1 105 . ? . description=trf chr3 . repeat_region 1 105 . ? . description=dust chr3 . repeat_region 725 732 . ? . description=dust chr3 . repeat_region 857 864 . ? . description=dust chr3 . repeat_region 999 1059 . ? . description=trf chr3 . repeat_region 1210 1353 . ? . description=trf chr3 . repeat_region 1398 1573 . - . description=Copia9I_TP chr3 . repeat_region 1499 1543 . ? . description=trf chr3 . repeat_region 2127 2191 . ? . description=trf chr3 . repeat_region 2155 2228 . ? . description=trf chr3 . repeat_region 2446 3436 . ? . description=trf chr3 . repeat_region 2476 2649 . - . description=SAT1_TP chr3 . repeat_region 2650 2823 . - . description=SAT1_TP chr3 . repeat_region 2824 2997 . - . description=SAT1_TP chr3 . repeat_region 2998 3171 . - . description=SAT1_TP chr3 . repeat_region 3173 3345 . - . description=SAT1_TP chr3 . repeat_region 3346 3504 . - . description=SAT1_TP chr3 . repeat_region 4728 4740 . ? . description=dust chr3 . repeat_region 4818 4851 . ? . description=trf chr3 . repeat_region 4938 4993 . ? . description=trf chr3 . repeat_region 5241 5275 . ? . description=dust chr3 . repeat_region 5341 5960 . - . description=tp16_ASNotSingleton chr3 . repeat_region 6058 6677 . - . description=scaffold_32_80_4_242182_244563 chr3 . repeat_region 6841 7021 . - . description=TE2c_TP chr3 . repeat_region 7782 7819 . ? . description=trf chr3 ensembl protein_coding_gene 7335 8939 . + . ID=Thaps261623;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ4];external_name=Thaps261623;logic_name=jgi_thaps3 chr3 ensembl transcript 7335 8939 . + . ID=Thaps261623;Parent=Thaps261623;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 7335 7452 . + 0 ID=Thaps261623;Parent=Thaps261623;rank=1 chr3 . exon 7335 7452 . + . ID=Thaps261623.1;Parent=Thaps261623;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 7921 8066 . + 0 ID=Thaps261623;Parent=Thaps261623;rank=2 chr3 . exon 7921 8066 . + . ID=Thaps261623.2;Parent=Thaps261623;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 8202 8306 . + 0 ID=Thaps261623;Parent=Thaps261623;rank=3 chr3 . exon 8202 8306 . + . ID=Thaps261623.3;Parent=Thaps261623;constitutive=1;rank=3 chr3 . CDS 8340 8580 . + 0 ID=Thaps261623;Parent=Thaps261623;rank=4 chr3 . exon 8340 8580 . + . ID=Thaps261623.4;Parent=Thaps261623;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 8617 8939 . + 0 ID=Thaps261623;Parent=Thaps261623;rank=5 chr3 . exon 8617 8939 . + . ID=Thaps261623.5;Parent=Thaps261623;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 312 770 . + . ID=Thaps3067;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ3];external_name=Thaps3067;logic_name=jgi_thaps3 chr3 ensembl transcript 312 770 . + . ID=Thaps3067;Parent=Thaps3067;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 312 770 . + 0 ID=Thaps3067;Parent=Thaps3067;rank=1 chr3 . exon 312 770 . + . ID=Thaps3067.1;Parent=Thaps3067;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 9945 10537 . - . ID=Thaps3069;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ5];external_name=Thaps3069;logic_name=jgi_thaps3 chr3 ensembl transcript 9945 10537 . - . ID=Thaps3069;Parent=Thaps3069;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 9945 10129 . - 0 ID=Thaps3069;Parent=Thaps3069;rank=3 chr3 . exon 9945 10129 . - . ID=Thaps3069.3;Parent=Thaps3069;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 10176 10348 . - 0 ID=Thaps3069;Parent=Thaps3069;rank=2 chr3 . CDS 10389 10537 . - 0 ID=Thaps3069;Parent=Thaps3069;rank=1 chr3 . repeat_region 15202 15632 . + . description=Copia5ALTR_TP chr3 . repeat_region 15633 21727 . + . description=Copia5I_TP chr3 . exon 10176 10348 . - . ID=Thaps3069.2;Parent=Thaps3069;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 10389 10537 . - . ID=Thaps3069.1;Parent=Thaps3069;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 12831 13626 . + . ID=Thaps3071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ7];external_name=Thaps3071;logic_name=jgi_thaps3 chr3 ensembl transcript 12831 13626 . + . ID=Thaps3071;Parent=Thaps3071;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 12831 12958 . + 0 ID=Thaps3071;Parent=Thaps3071;rank=1 chr3 . exon 12831 12958 . + . ID=Thaps3071.1;Parent=Thaps3071;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 13150 13190 . + 0 ID=Thaps3071;Parent=Thaps3071;rank=2 chr3 . exon 13150 13190 . + . ID=Thaps3071.2;Parent=Thaps3071;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 13355 13626 . + 0 ID=Thaps3071;Parent=Thaps3071;rank=3 chr3 . exon 13355 13626 . + . ID=Thaps3071.3;Parent=Thaps3071;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 11396 12193 . + . ID=Thaps33228;biotype=protein_coding;description=Syntaxin%2C epimorphin family [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ6];external_name=Thaps33228;logic_name=jgi_thaps3 chr3 ensembl transcript 11396 12193 . + . ID=Thaps33228;Parent=Thaps33228;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 11396 12193 . + 0 ID=Thaps33228;Parent=Thaps33228;rank=1 chr3 . exon 11396 12193 . + . ID=Thaps33228.1;Parent=Thaps33228;constitutive=1;rank=1 chr3 . repeat_region 23577 23584 . ? . description=dust chr3 . repeat_region 24244 24263 . ? . description=trf chr3 . repeat_region 24244 24263 . ? . description=dust chr3 ensembl protein_coding_gene 23014 25458 . + . ID=Thaps21583;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ8];external_name=Thaps21583;logic_name=jgi_thaps3 chr3 ensembl transcript 23014 25458 . + . ID=Thaps21583;Parent=Thaps21583;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 23014 25458 . + 0 ID=Thaps21583;Parent=Thaps21583;rank=1 chr3 . exon 23014 25458 . + . ID=Thaps21583.1;Parent=Thaps21583;constitutive=1;rank=1 chr3 ensembl gene 28581 29034 . + . ID=Thaps261627;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 28581 29034 . + . ID=Thaps261627;Parent=Thaps261627;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 28581 29034 . + . ID=Thaps261627.1;Parent=Thaps261627;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 25630 26781 . - . ID=Thaps3073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ9];external_name=Thaps3073;logic_name=jgi_thaps3 chr3 ensembl transcript 25630 26781 . - . ID=Thaps3073;Parent=Thaps3073;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 25630 26781 . - 0 ID=Thaps3073;Parent=Thaps3073;rank=1 chr3 . exon 25630 26781 . - . ID=Thaps3073.1;Parent=Thaps3073;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 35588 41212 . - . ID=Thaps21584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR1];external_name=Thaps21584;logic_name=jgi_thaps3 chr3 ensembl transcript 35588 41212 . - . ID=Thaps21584;Parent=Thaps21584;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 35588 37127 . - 0 ID=Thaps21584;Parent=Thaps21584;rank=7 chr3 . exon 35588 37127 . - . ID=Thaps21584.7;Parent=Thaps21584;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . CDS 37219 38497 . - 0 ID=Thaps21584;Parent=Thaps21584;rank=6 chr3 . exon 37219 38497 . - . ID=Thaps21584.6;Parent=Thaps21584;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 38597 39727 . - 0 ID=Thaps21584;Parent=Thaps21584;rank=5 chr3 . exon 38597 39727 . - . ID=Thaps21584.5;Parent=Thaps21584;constitutive=1;rank=5 chr3 . CDS 39805 39962 . - 0 ID=Thaps21584;Parent=Thaps21584;rank=4 chr3 . exon 39805 39962 . - . ID=Thaps21584.4;Parent=Thaps21584;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 40167 40299 . - 0 ID=Thaps21584;Parent=Thaps21584;rank=3 chr3 . CDS 40328 40368 . - 0 ID=Thaps21584;Parent=Thaps21584;rank=2 chr3 . CDS 40401 41212 . - 0 ID=Thaps21584;Parent=Thaps21584;rank=1 chr3 ensembl protein_coding_gene 31348 32748 . + . ID=Thaps3075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR0];external_name=Thaps3075;logic_name=jgi_thaps3 chr3 ensembl transcript 31348 32748 . + . ID=Thaps3075;Parent=Thaps3075;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 31348 32748 . + 0 ID=Thaps3075;Parent=Thaps3075;rank=1 chr3 . exon 31348 32748 . + . ID=Thaps3075.1;Parent=Thaps3075;constitutive=1;rank=1 chr3 . repeat_region 39977 40024 . ? . description=dust chr3 . repeat_region 43337 43396 . ? . description=dust chr3 . repeat_region 43337 43415 . ? . description=trf chr3 . repeat_region 43342 43408 . ? . description=trf chr3 . exon 40167 40299 . - . ID=Thaps21584.3;Parent=Thaps21584;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 40328 40368 . - . ID=Thaps21584.2;Parent=Thaps21584;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 40401 41212 . - . ID=Thaps21584.1;Parent=Thaps21584;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 41780 43936 . - . ID=Thaps21585;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR2];external_name=Thaps21585;logic_name=jgi_thaps3 chr3 ensembl transcript 41780 43936 . - . ID=Thaps21585;Parent=Thaps21585;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 41780 43142 . - 0 ID=Thaps21585;Parent=Thaps21585;rank=2 chr3 . exon 41780 43142 . - . ID=Thaps21585.2;Parent=Thaps21585;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 43230 43936 . - 0 ID=Thaps21585;Parent=Thaps21585;rank=1 chr3 . exon 43230 43936 . - . ID=Thaps21585.1;Parent=Thaps21585;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 44766 50848 . + . ID=Thaps3078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR3];external_name=Thaps3078;logic_name=jgi_thaps3 chr3 ensembl transcript 44766 50848 . + . ID=Thaps3078;Parent=Thaps3078;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 44766 45070 . + 0 ID=Thaps3078;Parent=Thaps3078;rank=1 chr3 . exon 44766 45070 . + . ID=Thaps3078.1;Parent=Thaps3078;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 45157 45183 . + 0 ID=Thaps3078;Parent=Thaps3078;rank=2 chr3 . exon 45157 45183 . + . ID=Thaps3078.2;Parent=Thaps3078;constitutive=1;rank=2 chr3 . CDS 45281 46477 . + 0 ID=Thaps3078;Parent=Thaps3078;rank=3 chr3 . exon 45281 46477 . + . ID=Thaps3078.3;Parent=Thaps3078;constitutive=1;rank=3 chr3 . CDS 46852 47579 . + 0 ID=Thaps3078;Parent=Thaps3078;rank=4 chr3 . exon 46852 47579 . + . ID=Thaps3078.4;Parent=Thaps3078;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 47735 50342 . + 0 ID=Thaps3078;Parent=Thaps3078;rank=5 chr3 . exon 47735 50342 . + . ID=Thaps3078.5;Parent=Thaps3078;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 50422 50848 . + 0 ID=Thaps3078;Parent=Thaps3078;rank=6 chr3 ensembl protein_coding_gene 50950 55271 . - . ID=Thaps21586;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR4];external_name=Thaps21586;logic_name=jgi_thaps3 chr3 ensembl transcript 50950 55271 . - . ID=Thaps21586;Parent=Thaps21586;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 50950 51326 . - 0 ID=Thaps21586;Parent=Thaps21586;rank=7 chr3 . exon 50950 51326 . - . ID=Thaps21586.7;Parent=Thaps21586;constitutive=1;ensembl_end_phase=2;rank=7 chr3 . CDS 51407 51784 . - 0 ID=Thaps21586;Parent=Thaps21586;rank=6 chr3 . exon 51407 51784 . - . ID=Thaps21586.6;Parent=Thaps21586;constitutive=1;rank=6 chr3 . CDS 51864 51988 . - 0 ID=Thaps21586;Parent=Thaps21586;rank=5 chr3 . exon 51864 51988 . - . ID=Thaps21586.5;Parent=Thaps21586;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 52071 52605 . - 0 ID=Thaps21586;Parent=Thaps21586;rank=4 chr3 . exon 52071 52605 . - . ID=Thaps21586.4;Parent=Thaps21586;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 52685 52845 . - 0 ID=Thaps21586;Parent=Thaps21586;rank=3 chr3 . exon 52685 52845 . - . ID=Thaps21586.3;Parent=Thaps21586;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 52925 53600 . - 0 ID=Thaps21586;Parent=Thaps21586;rank=2 chr3 . exon 52925 53600 . - . ID=Thaps21586.2;Parent=Thaps21586;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 53687 55271 . - 0 ID=Thaps21586;Parent=Thaps21586;rank=1 chr3 . exon 53687 55271 . - . ID=Thaps21586.1;Parent=Thaps21586;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 55705 57665 . - . ID=Thaps21587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR5];external_name=Thaps21587;logic_name=jgi_thaps3 chr3 ensembl transcript 55705 57665 . - . ID=Thaps21587;Parent=Thaps21587;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 55705 56651 . - 0 ID=Thaps21587;Parent=Thaps21587;rank=2 chr3 . exon 55705 56651 . - . ID=Thaps21587.2;Parent=Thaps21587;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 56741 57665 . - 0 ID=Thaps21587;Parent=Thaps21587;rank=1 chr3 . exon 56741 57665 . - . ID=Thaps21587.1;Parent=Thaps21587;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . exon 50422 50848 . + . ID=Thaps3078.6;Parent=Thaps3078;constitutive=1;ensembl_end_phase=1;rank=6 chr3 ensembl protein_coding_gene 58229 59522 . - . ID=Thaps3081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR6];external_name=Thaps3081;logic_name=jgi_thaps3 chr3 ensembl transcript 58229 59522 . - . ID=Thaps3081;Parent=Thaps3081;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 58229 59103 . - 0 ID=Thaps3081;Parent=Thaps3081;rank=2 chr3 . exon 58229 59103 . - . ID=Thaps3081.2;Parent=Thaps3081;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 59186 59522 . - 0 ID=Thaps3081;Parent=Thaps3081;rank=1 chr3 . exon 59186 59522 . - . ID=Thaps3081.1;Parent=Thaps3081;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 60892 60899 . ? . description=dust chr3 ensembl protein_coding_gene 66020 71373 . - . ID=Thaps21589;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR7];external_name=Thaps21589;logic_name=jgi_thaps3 chr3 ensembl transcript 66020 71373 . - . ID=Thaps21589;Parent=Thaps21589;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 66020 66126 . - 0 ID=Thaps21589;Parent=Thaps21589;rank=9 chr3 . exon 66020 66126 . - . ID=Thaps21589.9;Parent=Thaps21589;constitutive=1;ensembl_end_phase=2;rank=9 chr3 . CDS 66209 66247 . - 0 ID=Thaps21589;Parent=Thaps21589;rank=8 chr3 . exon 66209 66247 . - . ID=Thaps21589.8;Parent=Thaps21589;constitutive=1;rank=8 chr3 . CDS 66372 66473 . - 0 ID=Thaps21589;Parent=Thaps21589;rank=7 chr3 . exon 66372 66473 . - . ID=Thaps21589.7;Parent=Thaps21589;constitutive=1;rank=7 chr3 . CDS 66559 66611 . - 0 ID=Thaps21589;Parent=Thaps21589;rank=6 chr3 . exon 66559 66611 . - . ID=Thaps21589.6;Parent=Thaps21589;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 66821 67414 . - 0 ID=Thaps21589;Parent=Thaps21589;rank=5 chr3 . exon 66821 67414 . - . ID=Thaps21589.5;Parent=Thaps21589;constitutive=1;rank=5 chr3 . CDS 67492 67538 . - 0 ID=Thaps21589;Parent=Thaps21589;rank=4 chr3 . exon 67492 67538 . - . ID=Thaps21589.4;Parent=Thaps21589;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 67631 69587 . - 0 ID=Thaps21589;Parent=Thaps21589;rank=3 chr3 . exon 67631 69587 . - . ID=Thaps21589.3;Parent=Thaps21589;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 69864 70578 . - 0 ID=Thaps21589;Parent=Thaps21589;rank=2 chr3 . CDS 70680 71373 . - 0 ID=Thaps21589;Parent=Thaps21589;rank=1 chr3 . repeat_region 78803 78850 . ? . description=trf chr3 . repeat_region 78924 78968 . ? . description=trf chr3 . exon 69864 70578 . - . ID=Thaps21589.2;Parent=Thaps21589;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . exon 70680 71373 . - . ID=Thaps21589.1;Parent=Thaps21589;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 72336 74479 . + . ID=Thaps21590;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR8];external_name=Thaps21590;logic_name=jgi_thaps3 chr3 ensembl transcript 72336 74479 . + . ID=Thaps21590;Parent=Thaps21590;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 72336 73398 . + 0 ID=Thaps21590;Parent=Thaps21590;rank=1 chr3 . exon 72336 73398 . + . ID=Thaps21590.1;Parent=Thaps21590;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 73527 74479 . + 0 ID=Thaps21590;Parent=Thaps21590;rank=2 chr3 . exon 73527 74479 . + . ID=Thaps21590.2;Parent=Thaps21590;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 75497 78891 . - . ID=Thaps3085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWR9];external_name=Thaps3085;logic_name=jgi_thaps3 chr3 ensembl transcript 75497 78891 . - . ID=Thaps3085;Parent=Thaps3085;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 75497 75618 . - 0 ID=Thaps3085;Parent=Thaps3085;rank=5 chr3 . exon 75497 75618 . - . ID=Thaps3085.5;Parent=Thaps3085;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 75706 76683 . - 0 ID=Thaps3085;Parent=Thaps3085;rank=4 chr3 . exon 75706 76683 . - . ID=Thaps3085.4;Parent=Thaps3085;constitutive=1;rank=4 chr3 . CDS 76768 76904 . - 0 ID=Thaps3085;Parent=Thaps3085;rank=3 chr3 . exon 76768 76904 . - . ID=Thaps3085.3;Parent=Thaps3085;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 76976 78401 . - 0 ID=Thaps3085;Parent=Thaps3085;rank=2 chr3 . exon 76976 78401 . - . ID=Thaps3085.2;Parent=Thaps3085;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 78492 78891 . - 0 ID=Thaps3085;Parent=Thaps3085;rank=1 chr3 . exon 78492 78891 . - . ID=Thaps3085.1;Parent=Thaps3085;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 82260 82267 . ? . description=dust chr3 . repeat_region 86135 86162 . ? . description=dust chr3 ensembl protein_coding_gene 79923 80816 . + . ID=Thaps21591;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS0];external_name=Thaps21591;logic_name=jgi_thaps3 chr3 ensembl transcript 79923 80816 . + . ID=Thaps21591;Parent=Thaps21591;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 79923 80816 . + 0 ID=Thaps21591;Parent=Thaps21591;rank=1 chr3 . exon 79923 80816 . + . ID=Thaps21591.1;Parent=Thaps21591;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 82378 83061 . + . ID=Thaps21592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS1];external_name=Thaps21592;logic_name=jgi_thaps3 chr3 ensembl transcript 82378 83061 . + . ID=Thaps21592;Parent=Thaps21592;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 82378 83061 . + 0 ID=Thaps21592;Parent=Thaps21592;rank=1 chr3 . exon 82378 83061 . + . ID=Thaps21592.1;Parent=Thaps21592;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 85106 90453 . + . ID=Thaps21593;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS2];external_name=Thaps21593;logic_name=jgi_thaps3 chr3 ensembl transcript 85106 90453 . + . ID=Thaps21593;Parent=Thaps21593;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 85106 86389 . + 0 ID=Thaps21593;Parent=Thaps21593;rank=1 chr3 . exon 85106 86389 . + . ID=Thaps21593.1;Parent=Thaps21593;constitutive=1;rank=1 chr3 . CDS 86461 87404 . + 0 ID=Thaps21593;Parent=Thaps21593;rank=2 chr3 . exon 86461 87404 . + . ID=Thaps21593.2;Parent=Thaps21593;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 87657 88086 . + 0 ID=Thaps21593;Parent=Thaps21593;rank=3 chr3 . exon 87657 88086 . + . ID=Thaps21593.3;Parent=Thaps21593;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 88166 88649 . + 0 ID=Thaps21593;Parent=Thaps21593;rank=4 chr3 . exon 88166 88649 . + . ID=Thaps21593.4;Parent=Thaps21593;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 88755 89066 . + 0 ID=Thaps21593;Parent=Thaps21593;rank=5 chr3 . exon 88755 89066 . + . ID=Thaps21593.5;Parent=Thaps21593;constitutive=1;rank=5 chr3 . CDS 89142 89420 . + 0 ID=Thaps21593;Parent=Thaps21593;rank=6 chr3 . exon 89142 89420 . + . ID=Thaps21593.6;Parent=Thaps21593;constitutive=1;rank=6 chr3 . CDS 89776 89977 . + 0 ID=Thaps21593;Parent=Thaps21593;rank=7 chr3 . CDS 90289 90355 . + 0 ID=Thaps21593;Parent=Thaps21593;rank=8 chr3 . CDS 90391 90453 . + 0 ID=Thaps21593;Parent=Thaps21593;rank=9 chr3 . repeat_region 93615 93667 . ? . description=trf chr3 . repeat_region 93624 93652 . ? . description=trf chr3 . repeat_region 94109 94246 . ? . description=trf chr3 . repeat_region 98835 99271 . ? . description=trf chr3 . repeat_region 99398 99477 . ? . description=trf chr3 . repeat_region 99402 99802 . + . description=TE2c_TP chr3 . repeat_region 99542 99836 . - . description=TE2c_TP chr3 . exon 89776 89977 . + . ID=Thaps21593.7;Parent=Thaps21593;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . exon 90289 90355 . + . ID=Thaps21593.8;Parent=Thaps21593;constitutive=1;ensembl_end_phase=1;rank=8 chr3 . exon 90391 90453 . + . ID=Thaps21593.9;Parent=Thaps21593;constitutive=1;rank=9 chr3 ensembl protein_coding_gene 91736 92935 . + . ID=Thaps21594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS3];external_name=Thaps21594;logic_name=jgi_thaps3 chr3 ensembl transcript 91736 92935 . + . ID=Thaps21594;Parent=Thaps21594;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 91736 92935 . + 0 ID=Thaps21594;Parent=Thaps21594;rank=1 chr3 . exon 91736 92935 . + . ID=Thaps21594.1;Parent=Thaps21594;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 93677 97449 . + . ID=Thaps21595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS4];external_name=Thaps21595;logic_name=jgi_thaps3 chr3 ensembl transcript 93677 97449 . + . ID=Thaps21595;Parent=Thaps21595;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 93677 94256 . + 0 ID=Thaps21595;Parent=Thaps21595;rank=1 chr3 . exon 93677 94256 . + . ID=Thaps21595.1;Parent=Thaps21595;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 94362 94739 . + 0 ID=Thaps21595;Parent=Thaps21595;rank=2 chr3 . exon 94362 94739 . + . ID=Thaps21595.2;Parent=Thaps21595;constitutive=1;rank=2 chr3 . CDS 94856 95722 . + 0 ID=Thaps21595;Parent=Thaps21595;rank=3 chr3 . exon 94856 95722 . + . ID=Thaps21595.3;Parent=Thaps21595;constitutive=1;rank=3 chr3 . CDS 95802 96568 . + 0 ID=Thaps21595;Parent=Thaps21595;rank=4 chr3 . exon 95802 96568 . + . ID=Thaps21595.4;Parent=Thaps21595;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 96652 97449 . + 0 ID=Thaps21595;Parent=Thaps21595;rank=5 chr3 . exon 96652 97449 . + . ID=Thaps21595.5;Parent=Thaps21595;constitutive=1;rank=5 chr3 ensembl protein_coding_gene 97920 98075 . - . ID=Thaps261629;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS5];external_name=Thaps261629;logic_name=jgi_thaps3 chr3 ensembl transcript 97920 98075 . - . ID=Thaps261629;Parent=Thaps261629;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 97920 98075 . - 0 ID=Thaps261629;Parent=Thaps261629;rank=1 chr3 . exon 97920 98075 . - . ID=Thaps261629.1;Parent=Thaps261629;constitutive=1;rank=1 chr3 . repeat_region 100748 101255 . - . description=Harbinger2N_TP chr3 . repeat_region 100765 101383 . ? . description=dust chr3 . repeat_region 101258 101403 . - . description=Harbinger2N_TP chr3 . repeat_region 107625 107632 . ? . description=dust chr3 ensembl protein_coding_gene 104693 105394 . + . ID=Thaps3091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS6];external_name=Thaps3091;logic_name=jgi_thaps3 chr3 ensembl transcript 104693 105394 . + . ID=Thaps3091;Parent=Thaps3091;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 104693 105394 . + 0 ID=Thaps3091;Parent=Thaps3091;rank=1 chr3 . exon 104693 105394 . + . ID=Thaps3091.1;Parent=Thaps3091;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 105803 108642 . - . ID=Thaps3092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS7];external_name=Thaps3092;logic_name=jgi_thaps3 chr3 ensembl transcript 105803 108642 . - . ID=Thaps3092;Parent=Thaps3092;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 105803 105876 . - 0 ID=Thaps3092;Parent=Thaps3092;rank=5 chr3 . exon 105803 105876 . - . ID=Thaps3092.5;Parent=Thaps3092;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 106190 106412 . - 0 ID=Thaps3092;Parent=Thaps3092;rank=4 chr3 . exon 106190 106412 . - . ID=Thaps3092.4;Parent=Thaps3092;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 106433 107337 . - 0 ID=Thaps3092;Parent=Thaps3092;rank=3 chr3 . exon 106433 107337 . - . ID=Thaps3092.3;Parent=Thaps3092;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 107443 107712 . - 0 ID=Thaps3092;Parent=Thaps3092;rank=2 chr3 . exon 107443 107712 . - . ID=Thaps3092.2;Parent=Thaps3092;constitutive=1;rank=2 chr3 . CDS 108180 108642 . - 0 ID=Thaps3092;Parent=Thaps3092;rank=1 chr3 . exon 108180 108642 . - . ID=Thaps3092.1;Parent=Thaps3092;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 108957 109844 . - . ID=Thaps3093;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS8];external_name=Thaps3093;logic_name=jgi_thaps3 chr3 ensembl transcript 108957 109844 . - . ID=Thaps3093;Parent=Thaps3093;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 108957 109844 . - 0 ID=Thaps3093;Parent=Thaps3093;rank=1 chr3 . exon 108957 109844 . - . ID=Thaps3093.1;Parent=Thaps3093;constitutive=1;rank=1 chr3 . biological_region 118060 118065 0.999 + . logic_name=eponine chr3 ensembl protein_coding_gene 111879 112414 . - . ID=Thaps261631;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWT0];external_name=Thaps261631;logic_name=jgi_thaps3 chr3 ensembl transcript 111879 112414 . - . ID=Thaps261631;Parent=Thaps261631;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 111879 112047 . - 0 ID=Thaps261631;Parent=Thaps261631;rank=2 chr3 . exon 111879 112047 . - . ID=Thaps261631.2;Parent=Thaps261631;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 112133 112414 . - 0 ID=Thaps261631;Parent=Thaps261631;rank=1 chr3 . exon 112133 112414 . - . ID=Thaps261631.1;Parent=Thaps261631;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 115283 116847 . + . ID=Thaps261633;biotype=protein_coding;description=Probable cysteinyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BWT2];external_name=CTS2;logic_name=jgi_thaps3 chr3 ensembl transcript 115283 116847 . + . ID=Thaps261633;Parent=Thaps261633;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 115283 115784 . + 0 ID=Thaps261633;Parent=Thaps261633;rank=1 chr3 . exon 115283 115784 . + . ID=Thaps261633.1;Parent=Thaps261633;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 115806 115927 . + 0 ID=Thaps261633;Parent=Thaps261633;rank=2 chr3 . exon 115806 115927 . + . ID=Thaps261633.2;Parent=Thaps261633;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 115943 116402 . + 0 ID=Thaps261633;Parent=Thaps261633;rank=3 chr3 . exon 115943 116402 . + . ID=Thaps261633.3;Parent=Thaps261633;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 116430 116633 . + 0 ID=Thaps261633;Parent=Thaps261633;rank=4 chr3 . exon 116430 116633 . + . ID=Thaps261633.4;Parent=Thaps261633;constitutive=1;rank=4 chr3 . CDS 116712 116847 . + 0 ID=Thaps261633;Parent=Thaps261633;rank=5 chr3 . exon 116712 116847 . + . ID=Thaps261633.5;Parent=Thaps261633;constitutive=1;ensembl_end_phase=1;rank=5 chr3 ensembl protein_coding_gene 110946 111364 . + . ID=Thaps33193;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWS9];external_name=Thaps33193;logic_name=jgi_thaps3 chr3 ensembl transcript 110946 111364 . + . ID=Thaps33193;Parent=Thaps33193;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 110946 111215 . + 0 ID=Thaps33193;Parent=Thaps33193;rank=1 chr3 . exon 110946 111215 . + . ID=Thaps33193.1;Parent=Thaps33193;constitutive=1;rank=1 chr3 . CDS 111296 111364 . + 0 ID=Thaps33193;Parent=Thaps33193;rank=2 chr3 . exon 111296 111364 . + . ID=Thaps33193.2;Parent=Thaps33193;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 113463 114482 . - . ID=Thaps39767;biotype=protein_coding;description=5-hydroxyisourate hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8BWT1];external_name=Thaps39767;logic_name=jgi_thaps3 chr3 ensembl transcript 113463 114482 . - . ID=Thaps39767;Parent=Thaps39767;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 113463 114482 . - 0 ID=Thaps39767;Parent=Thaps39767;rank=1 chr3 . exon 113463 114482 . - . ID=Thaps39767.1;Parent=Thaps39767;constitutive=1;rank=1 chr3 . repeat_region 119715 119747 . ? . description=dust chr3 . repeat_region 123622 123629 . ? . description=dust chr3 . repeat_region 125519 125528 . ? . description=dust chr3 ensembl protein_coding_gene 120080 120910 . - . ID=Thaps21598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWT3];external_name=Thaps21598;logic_name=jgi_thaps3 chr3 ensembl transcript 120080 120910 . - . ID=Thaps21598;Parent=Thaps21598;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 120080 120910 . - 0 ID=Thaps21598;Parent=Thaps21598;rank=1 chr3 . exon 120080 120910 . - . ID=Thaps21598.1;Parent=Thaps21598;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 123660 124600 . + . ID=Thaps21599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWT6];external_name=Thaps21599;logic_name=jgi_thaps3 chr3 ensembl transcript 123660 124600 . + . ID=Thaps21599;Parent=Thaps21599;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 123660 123743 . + 0 ID=Thaps21599;Parent=Thaps21599;rank=1 chr3 . exon 123660 123743 . + . ID=Thaps21599.1;Parent=Thaps21599;constitutive=1;rank=1 chr3 . CDS 123950 124600 . + 0 ID=Thaps21599;Parent=Thaps21599;rank=2 chr3 . exon 123950 124600 . + . ID=Thaps21599.2;Parent=Thaps21599;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 126201 126915 . + . ID=Thaps21600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWT8];external_name=Thaps21600;logic_name=jgi_thaps3 chr3 ensembl transcript 126201 126915 . + . ID=Thaps21600;Parent=Thaps21600;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 126201 126282 . + 0 ID=Thaps21600;Parent=Thaps21600;rank=1 chr3 . exon 126201 126282 . + . ID=Thaps21600.1;Parent=Thaps21600;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 126494 126915 . + 0 ID=Thaps21600;Parent=Thaps21600;rank=2 chr3 . exon 126494 126915 . + . ID=Thaps21600.2;Parent=Thaps21600;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 128910 130100 . + . ID=Thaps21601;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWU0];external_name=Thaps21601;logic_name=jgi_thaps3 chr3 ensembl transcript 128910 130100 . + . ID=Thaps21601;Parent=Thaps21601;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 128910 130100 . + 0 ID=Thaps21601;Parent=Thaps21601;rank=1 chr3 . exon 128910 130100 . + . ID=Thaps21601.1;Parent=Thaps21601;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 121196 121984 . + . ID=Thaps3098;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWT4];external_name=Thaps3098;logic_name=jgi_thaps3 chr3 ensembl transcript 121196 121984 . + . ID=Thaps3098;Parent=Thaps3098;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 121196 121574 . + 0 ID=Thaps3098;Parent=Thaps3098;rank=1 chr3 . exon 121196 121574 . + . ID=Thaps3098.1;Parent=Thaps3098;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 121776 121984 . + 0 ID=Thaps3098;Parent=Thaps3098;rank=2 chr3 . exon 121776 121984 . + . ID=Thaps3098.2;Parent=Thaps3098;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 122571 123158 . - . ID=Thaps3099;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWT5];external_name=Thaps3099;logic_name=jgi_thaps3 chr3 ensembl transcript 122571 123158 . - . ID=Thaps3099;Parent=Thaps3099;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 122571 123158 . - 0 ID=Thaps3099;Parent=Thaps3099;rank=1 chr3 . exon 122571 123158 . - . ID=Thaps3099.1;Parent=Thaps3099;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 125318 125950 . - . ID=Thaps3101;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWT7];external_name=Thaps3101;logic_name=jgi_thaps3 chr3 ensembl transcript 125318 125950 . - . ID=Thaps3101;Parent=Thaps3101;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 125318 125471 . - 0 ID=Thaps3101;Parent=Thaps3101;rank=3 chr3 . exon 125318 125471 . - . ID=Thaps3101.3;Parent=Thaps3101;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 125502 125753 . - 0 ID=Thaps3101;Parent=Thaps3101;rank=2 chr3 . exon 125502 125753 . - . ID=Thaps3101.2;Parent=Thaps3101;constitutive=1;rank=2 chr3 . CDS 125868 125950 . - 0 ID=Thaps3101;Parent=Thaps3101;rank=1 chr3 . exon 125868 125950 . - . ID=Thaps3101.1;Parent=Thaps3101;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 127668 128486 . + . ID=Thaps3103;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWT9];external_name=Thaps3103;logic_name=jgi_thaps3 chr3 ensembl transcript 127668 128486 . + . ID=Thaps3103;Parent=Thaps3103;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 127668 128486 . + 0 ID=Thaps3103;Parent=Thaps3103;rank=1 chr3 . exon 127668 128486 . + . ID=Thaps3103.1;Parent=Thaps3103;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 138038 145965 . + . ID=Thaps21602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWU5];external_name=Thaps21602;logic_name=jgi_thaps3 chr3 ensembl transcript 138038 145965 . + . ID=Thaps21602;Parent=Thaps21602;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 138038 138611 . + 0 ID=Thaps21602;Parent=Thaps21602;rank=1 chr3 . exon 138038 138611 . + . ID=Thaps21602.1;Parent=Thaps21602;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 138751 140741 . + 0 ID=Thaps21602;Parent=Thaps21602;rank=2 chr3 . exon 138751 140741 . + . ID=Thaps21602.2;Parent=Thaps21602;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 140818 141564 . + 0 ID=Thaps21602;Parent=Thaps21602;rank=3 chr3 . CDS 141603 143005 . + 0 ID=Thaps21602;Parent=Thaps21602;rank=4 chr3 . CDS 143306 145443 . + 0 ID=Thaps21602;Parent=Thaps21602;rank=5 chr3 . CDS 145535 145965 . + 0 ID=Thaps21602;Parent=Thaps21602;rank=6 chr3 ensembl protein_coding_gene 133281 134163 . + . ID=Thaps261635;biotype=protein_coding;description=Proliferating cell nuclear antigen [Source:UniProtKB/TrEMBL%3BAcc:B8BWU2];external_name=PCNA;logic_name=jgi_thaps3 chr3 ensembl transcript 133281 134163 . + . ID=Thaps261635;Parent=Thaps261635;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 133281 133623 . + 0 ID=Thaps261635;Parent=Thaps261635;rank=1 chr3 . exon 133281 133623 . + . ID=Thaps261635.1;Parent=Thaps261635;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 133721 134163 . + 0 ID=Thaps261635;Parent=Thaps261635;rank=2 chr3 . exon 133721 134163 . + . ID=Thaps261635.2;Parent=Thaps261635;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 130440 132823 . - . ID=Thaps3105;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWU1];external_name=Thaps3105;logic_name=jgi_thaps3 chr3 ensembl transcript 130440 132823 . - . ID=Thaps3105;Parent=Thaps3105;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 130440 131104 . - 0 ID=Thaps3105;Parent=Thaps3105;rank=5 chr3 . exon 130440 131104 . - . ID=Thaps3105.5;Parent=Thaps3105;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 131183 131546 . - 0 ID=Thaps3105;Parent=Thaps3105;rank=4 chr3 . exon 131183 131546 . - . ID=Thaps3105.4;Parent=Thaps3105;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 131682 132250 . - 0 ID=Thaps3105;Parent=Thaps3105;rank=3 chr3 . exon 131682 132250 . - . ID=Thaps3105.3;Parent=Thaps3105;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 132393 132519 . - 0 ID=Thaps3105;Parent=Thaps3105;rank=2 chr3 . exon 132393 132519 . - . ID=Thaps3105.2;Parent=Thaps3105;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 132602 132823 . - 0 ID=Thaps3105;Parent=Thaps3105;rank=1 chr3 . exon 132602 132823 . - . ID=Thaps3105.1;Parent=Thaps3105;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 134590 135504 . - . ID=Thaps3107;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWU3];external_name=Thaps3107;logic_name=jgi_thaps3 chr3 ensembl transcript 134590 135504 . - . ID=Thaps3107;Parent=Thaps3107;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 134590 135504 . - 0 ID=Thaps3107;Parent=Thaps3107;rank=1 chr3 . exon 134590 135504 . - . ID=Thaps3107.1;Parent=Thaps3107;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 136130 137032 . + . ID=Thaps3108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWU4];external_name=Thaps3108;logic_name=jgi_thaps3 chr3 ensembl transcript 136130 137032 . + . ID=Thaps3108;Parent=Thaps3108;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 136130 137032 . + 0 ID=Thaps3108;Parent=Thaps3108;rank=1 chr3 . exon 136130 137032 . + . ID=Thaps3108.1;Parent=Thaps3108;constitutive=1;rank=1 chr3 . repeat_region 148178 148233 . ? . description=dust chr3 . exon 140818 141564 . + . ID=Thaps21602.3;Parent=Thaps21602;constitutive=1;rank=3 chr3 . exon 141603 143005 . + . ID=Thaps21602.4;Parent=Thaps21602;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . exon 143306 145443 . + . ID=Thaps21602.5;Parent=Thaps21602;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . exon 145535 145965 . + . ID=Thaps21602.6;Parent=Thaps21602;constitutive=1;ensembl_end_phase=2;rank=6 chr3 ensembl protein_coding_gene 146156 148951 . - . ID=Thaps3110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWU6];external_name=Thaps3110;logic_name=jgi_thaps3 chr3 ensembl transcript 146156 148951 . - . ID=Thaps3110;Parent=Thaps3110;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 146156 146247 . - 0 ID=Thaps3110;Parent=Thaps3110;rank=6 chr3 . exon 146156 146247 . - . ID=Thaps3110.6;Parent=Thaps3110;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 146381 146425 . - 0 ID=Thaps3110;Parent=Thaps3110;rank=5 chr3 . exon 146381 146425 . - . ID=Thaps3110.5;Parent=Thaps3110;constitutive=1;rank=5 chr3 . CDS 146538 147230 . - 0 ID=Thaps3110;Parent=Thaps3110;rank=4 chr3 . exon 146538 147230 . - . ID=Thaps3110.4;Parent=Thaps3110;constitutive=1;rank=4 chr3 . CDS 148058 148108 . - 0 ID=Thaps3110;Parent=Thaps3110;rank=3 chr3 . exon 148058 148108 . - . ID=Thaps3110.3;Parent=Thaps3110;constitutive=1;rank=3 chr3 . CDS 148135 148582 . - 0 ID=Thaps3110;Parent=Thaps3110;rank=2 chr3 . exon 148135 148582 . - . ID=Thaps3110.2;Parent=Thaps3110;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 148796 148951 . - 0 ID=Thaps3110;Parent=Thaps3110;rank=1 chr3 . exon 148796 148951 . - . ID=Thaps3110.1;Parent=Thaps3110;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 149390 151045 . + . ID=Thaps3111;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWU7];external_name=Thaps3111;logic_name=jgi_thaps3 chr3 ensembl transcript 149390 151045 . + . ID=Thaps3111;Parent=Thaps3111;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 149390 149588 . + 0 ID=Thaps3111;Parent=Thaps3111;rank=1 chr3 . exon 149390 149588 . + . ID=Thaps3111.1;Parent=Thaps3111;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 149679 150074 . + 0 ID=Thaps3111;Parent=Thaps3111;rank=2 chr3 . CDS 150168 151045 . + 0 ID=Thaps3111;Parent=Thaps3111;rank=3 chr3 . repeat_region 158115 158134 . ? . description=trf chr3 ensembl protein_coding_gene 158022 160259 . + . ID=Thaps21603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWV1];external_name=Thaps21603;logic_name=jgi_thaps3 chr3 ensembl transcript 158022 160259 . + . ID=Thaps21603;Parent=Thaps21603;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 158022 160259 . + 0 ID=Thaps21603;Parent=Thaps21603;rank=1 chr3 . exon 158022 160259 . + . ID=Thaps21603.1;Parent=Thaps21603;constitutive=1;rank=1 chr3 ensembl gene 152280 152678 . - . ID=Thaps261636;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 152280 152678 . - . ID=Thaps261636;Parent=Thaps261636;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 152280 152678 . - . ID=Thaps261636.1;Parent=Thaps261636;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 152852 153624 . - . ID=Thaps261637;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWU8];external_name=Thaps261637;logic_name=jgi_thaps3 chr3 ensembl transcript 152852 153624 . - . ID=Thaps261637;Parent=Thaps261637;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 152852 153081 . - 0 ID=Thaps261637;Parent=Thaps261637;rank=3 chr3 . exon 152852 153081 . - . ID=Thaps261637.3;Parent=Thaps261637;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 153112 153281 . - 0 ID=Thaps261637;Parent=Thaps261637;rank=2 chr3 . exon 153112 153281 . - . ID=Thaps261637.2;Parent=Thaps261637;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 153369 153624 . - 0 ID=Thaps261637;Parent=Thaps261637;rank=1 chr3 . exon 153369 153624 . - . ID=Thaps261637.1;Parent=Thaps261637;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . exon 149679 150074 . + . ID=Thaps3111.2;Parent=Thaps3111;constitutive=1;rank=2 chr3 . exon 150168 151045 . + . ID=Thaps3111.3;Parent=Thaps3111;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 154589 155249 . + . ID=Thaps3113;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWU9];external_name=Thaps3113;logic_name=jgi_thaps3 chr3 ensembl transcript 154589 155249 . + . ID=Thaps3113;Parent=Thaps3113;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 154589 154733 . + 0 ID=Thaps3113;Parent=Thaps3113;rank=1 chr3 . exon 154589 154733 . + . ID=Thaps3113.1;Parent=Thaps3113;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 154879 155249 . + 0 ID=Thaps3113;Parent=Thaps3113;rank=2 chr3 . exon 154879 155249 . + . ID=Thaps3113.2;Parent=Thaps3113;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 155744 156438 . - . ID=Thaps3114;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWV0];external_name=Thaps3114;logic_name=jgi_thaps3 chr3 ensembl transcript 155744 156438 . - . ID=Thaps3114;Parent=Thaps3114;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 155744 156036 . - 0 ID=Thaps3114;Parent=Thaps3114;rank=2 chr3 . exon 155744 156036 . - . ID=Thaps3114.2;Parent=Thaps3114;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 156147 156438 . - 0 ID=Thaps3114;Parent=Thaps3114;rank=1 chr3 . exon 156147 156438 . - . ID=Thaps3114.1;Parent=Thaps3114;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 162355 164073 . + . ID=Thaps21604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWV3];external_name=Thaps21604;logic_name=jgi_thaps3 chr3 ensembl transcript 162355 164073 . + . ID=Thaps21604;Parent=Thaps21604;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 162355 163127 . + 0 ID=Thaps21604;Parent=Thaps21604;rank=1 chr3 . exon 162355 163127 . + . ID=Thaps21604.1;Parent=Thaps21604;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 163193 163227 . + 0 ID=Thaps21604;Parent=Thaps21604;rank=2 chr3 . exon 163193 163227 . + . ID=Thaps21604.2;Parent=Thaps21604;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 163457 164073 . + 0 ID=Thaps21604;Parent=Thaps21604;rank=3 chr3 . exon 163457 164073 . + . ID=Thaps21604.3;Parent=Thaps21604;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 168078 171199 . + . ID=Thaps261639;biotype=protein_coding;description=DNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BWV6];external_name=HELICASE_1;logic_name=jgi_thaps3 chr3 ensembl transcript 168078 171199 . + . ID=Thaps261639;Parent=Thaps261639;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 168078 168176 . + 0 ID=Thaps261639;Parent=Thaps261639;rank=1 chr3 . exon 168078 168176 . + . ID=Thaps261639.1;Parent=Thaps261639;constitutive=1;rank=1 chr3 . CDS 168282 168626 . + 0 ID=Thaps261639;Parent=Thaps261639;rank=2 chr3 . exon 168282 168626 . + . ID=Thaps261639.2;Parent=Thaps261639;constitutive=1;rank=2 chr3 . CDS 168813 168954 . + 0 ID=Thaps261639;Parent=Thaps261639;rank=3 chr3 . exon 168813 168954 . + . ID=Thaps261639.3;Parent=Thaps261639;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 169177 170264 . + 0 ID=Thaps261639;Parent=Thaps261639;rank=4 chr3 . exon 169177 170264 . + . ID=Thaps261639.4;Parent=Thaps261639;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 170289 170357 . + 0 ID=Thaps261639;Parent=Thaps261639;rank=5 chr3 . CDS 170424 171199 . + 0 ID=Thaps261639;Parent=Thaps261639;rank=6 chr3 ensembl protein_coding_gene 160744 161601 . - . ID=Thaps3116;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWV2];external_name=Thaps3116;logic_name=jgi_thaps3 chr3 ensembl transcript 160744 161601 . - . ID=Thaps3116;Parent=Thaps3116;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 160744 161601 . - 0 ID=Thaps3116;Parent=Thaps3116;rank=1 chr3 . exon 160744 161601 . - . ID=Thaps3116.1;Parent=Thaps3116;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 165332 166345 . - . ID=Thaps3118;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWV4];external_name=Thaps3118;logic_name=jgi_thaps3 chr3 ensembl transcript 165332 166345 . - . ID=Thaps3118;Parent=Thaps3118;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 165332 166345 . - 0 ID=Thaps3118;Parent=Thaps3118;rank=1 chr3 . exon 165332 166345 . - . ID=Thaps3118.1;Parent=Thaps3118;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 166496 166828 . + . ID=Thaps3119;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWV5];external_name=Thaps3119;logic_name=jgi_thaps3 chr3 ensembl transcript 166496 166828 . + . ID=Thaps3119;Parent=Thaps3119;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 166496 166828 . + 0 ID=Thaps3119;Parent=Thaps3119;rank=1 chr3 . exon 166496 166828 . + . ID=Thaps3119.1;Parent=Thaps3119;constitutive=1;rank=1 chr3 . repeat_region 173105 173131 . ? . description=trf chr3 . repeat_region 174472 174516 . ? . description=trf chr3 . repeat_region 174472 174517 . ? . description=dust chr3 . repeat_region 174473 174525 . ? . description=trf chr3 . repeat_region 174476 174525 . ? . description=trf chr3 ensembl protein_coding_gene 175279 176646 . - . ID=Thaps21605;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWV8];external_name=Thaps21605;logic_name=jgi_thaps3 chr3 ensembl transcript 175279 176646 . - . ID=Thaps21605;Parent=Thaps21605;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 175279 176646 . - 0 ID=Thaps21605;Parent=Thaps21605;rank=1 chr3 . exon 175279 176646 . - . ID=Thaps21605.1;Parent=Thaps21605;constitutive=1;rank=1 chr3 . exon 170289 170357 . + . ID=Thaps261639.5;Parent=Thaps261639;constitutive=1;rank=5 chr3 . exon 170424 171199 . + . ID=Thaps261639.6;Parent=Thaps261639;constitutive=1;ensembl_end_phase=2;rank=6 chr3 ensembl protein_coding_gene 172528 173804 . + . ID=Thaps261640;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWV7];external_name=Thaps261640;logic_name=jgi_thaps3 chr3 ensembl transcript 172528 173804 . + . ID=Thaps261640;Parent=Thaps261640;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 172528 173394 . + 0 ID=Thaps261640;Parent=Thaps261640;rank=1 chr3 . exon 172528 173394 . + . ID=Thaps261640.1;Parent=Thaps261640;constitutive=1;rank=1 chr3 . CDS 173467 173804 . + 0 ID=Thaps261640;Parent=Thaps261640;rank=2 chr3 . exon 173467 173804 . + . ID=Thaps261640.2;Parent=Thaps261640;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 177179 180601 . + . ID=Thaps3123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWV9];external_name=Thaps3123;logic_name=jgi_thaps3 chr3 ensembl transcript 177179 180601 . + . ID=Thaps3123;Parent=Thaps3123;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 177179 180601 . + 0 ID=Thaps3123;Parent=Thaps3123;rank=1 chr3 . exon 177179 180601 . + . ID=Thaps3123.1;Parent=Thaps3123;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 180825 183996 . - . ID=Thaps3124;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW0];external_name=Thaps3124;logic_name=jgi_thaps3 chr3 ensembl transcript 180825 183996 . - . ID=Thaps3124;Parent=Thaps3124;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 180825 182833 . - 0 ID=Thaps3124;Parent=Thaps3124;rank=4 chr3 . exon 180825 182833 . - . ID=Thaps3124.4;Parent=Thaps3124;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 182937 183282 . - 0 ID=Thaps3124;Parent=Thaps3124;rank=3 chr3 . exon 182937 183282 . - . ID=Thaps3124.3;Parent=Thaps3124;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 183392 183495 . - 0 ID=Thaps3124;Parent=Thaps3124;rank=2 chr3 . exon 183392 183495 . - . ID=Thaps3124.2;Parent=Thaps3124;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 183522 183996 . - 0 ID=Thaps3124;Parent=Thaps3124;rank=1 chr3 . exon 183522 183996 . - . ID=Thaps3124.1;Parent=Thaps3124;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 186315 189556 . - . ID=Thaps3126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW2];external_name=Thaps3126;logic_name=jgi_thaps3 chr3 ensembl transcript 186315 189556 . - . ID=Thaps3126;Parent=Thaps3126;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 186315 186875 . - 0 ID=Thaps3126;Parent=Thaps3126;rank=4 chr3 . exon 186315 186875 . - . ID=Thaps3126.4;Parent=Thaps3126;constitutive=1;rank=4 chr3 . CDS 186961 187379 . - 0 ID=Thaps3126;Parent=Thaps3126;rank=3 chr3 . exon 186961 187379 . - . ID=Thaps3126.3;Parent=Thaps3126;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 187847 188261 . - 0 ID=Thaps3126;Parent=Thaps3126;rank=2 chr3 . exon 187847 188261 . - . ID=Thaps3126.2;Parent=Thaps3126;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 188354 189556 . - 0 ID=Thaps3126;Parent=Thaps3126;rank=1 chr3 . exon 188354 189556 . - . ID=Thaps3126.1;Parent=Thaps3126;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 184326 185411 . + . ID=Thaps33109;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW1];external_name=Thaps33109;logic_name=jgi_thaps3 chr3 ensembl transcript 184326 185411 . + . ID=Thaps33109;Parent=Thaps33109;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 184326 184560 . + 0 ID=Thaps33109;Parent=Thaps33109;rank=1 chr3 . exon 184326 184560 . + . ID=Thaps33109.1;Parent=Thaps33109;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 184616 184860 . + 0 ID=Thaps33109;Parent=Thaps33109;rank=2 chr3 . exon 184616 184860 . + . ID=Thaps33109.2;Parent=Thaps33109;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 184899 185411 . + 0 ID=Thaps33109;Parent=Thaps33109;rank=3 chr3 . exon 184899 185411 . + . ID=Thaps33109.3;Parent=Thaps33109;constitutive=1;rank=3 chr3 . repeat_region 189738 189779 . ? . description=trf chr3 . repeat_region 192549 192571 . ? . description=trf chr3 . repeat_region 192549 192598 . ? . description=dust chr3 . repeat_region 193251 193365 . + . description=SAT1_TP chr3 . repeat_region 193252 193707 . ? . description=trf chr3 . repeat_region 193414 193523 . + . description=SAT1_TP chr3 . repeat_region 193579 193694 . + . description=SAT1_TP chr3 . repeat_region 193728 193891 . + . description=SAT1_TP chr3 . repeat_region 193915 194219 . ? . description=trf chr3 . repeat_region 194067 194195 . + . description=SAT1_TP chr3 . repeat_region 194844 194882 . ? . description=dust chr3 . repeat_region 194857 194879 . ? . description=trf chr3 ensembl protein_coding_gene 189873 191981 . - . ID=Thaps21606;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW3];external_name=Thaps21606;logic_name=jgi_thaps3 chr3 ensembl transcript 189873 191981 . - . ID=Thaps21606;Parent=Thaps21606;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 189873 191981 . - 0 ID=Thaps21606;Parent=Thaps21606;rank=1 chr3 . exon 189873 191981 . - . ID=Thaps21606.1;Parent=Thaps21606;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 196144 198450 . + . ID=Thaps21607;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW4];external_name=Thaps21607;logic_name=jgi_thaps3 chr3 ensembl transcript 196144 198450 . + . ID=Thaps21607;Parent=Thaps21607;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 196144 198450 . + 0 ID=Thaps21607;Parent=Thaps21607;rank=1 chr3 . exon 196144 198450 . + . ID=Thaps21607.1;Parent=Thaps21607;constitutive=1;rank=1 chr3 . repeat_region 202459 202554 . - . description=TE2c_TP chr3 ensembl protein_coding_gene 200966 202275 . + . ID=Thaps261641;biotype=protein_coding;description=Ferric reductase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW5];external_name=Thaps261641;logic_name=jgi_thaps3 chr3 ensembl transcript 200966 202275 . + . ID=Thaps261641;Parent=Thaps261641;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 200966 201360 . + 0 ID=Thaps261641;Parent=Thaps261641;rank=1 chr3 . exon 200966 201360 . + . ID=Thaps261641.1;Parent=Thaps261641;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 201484 201594 . + 0 ID=Thaps261641;Parent=Thaps261641;rank=2 chr3 . exon 201484 201594 . + . ID=Thaps261641.2;Parent=Thaps261641;constitutive=1;rank=2 chr3 . CDS 201684 202275 . + 0 ID=Thaps261641;Parent=Thaps261641;rank=3 chr3 . exon 201684 202275 . + . ID=Thaps261641.3;Parent=Thaps261641;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 208160 209933 . + . ID=Thaps3131;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW7];external_name=Thaps3131;logic_name=jgi_thaps3 chr3 ensembl transcript 208160 209933 . + . ID=Thaps3131;Parent=Thaps3131;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 208160 208659 . + 0 ID=Thaps3131;Parent=Thaps3131;rank=1 chr3 . exon 208160 208659 . + . ID=Thaps3131.1;Parent=Thaps3131;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 208731 209031 . + 0 ID=Thaps3131;Parent=Thaps3131;rank=2 chr3 . exon 208731 209031 . + . ID=Thaps3131.2;Parent=Thaps3131;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 209119 209179 . + 0 ID=Thaps3131;Parent=Thaps3131;rank=3 chr3 . exon 209119 209179 . + . ID=Thaps3131.3;Parent=Thaps3131;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 209260 209373 . + 0 ID=Thaps3131;Parent=Thaps3131;rank=4 chr3 . CDS 209451 209597 . + 0 ID=Thaps3131;Parent=Thaps3131;rank=5 chr3 . CDS 209707 209933 . + 0 ID=Thaps3131;Parent=Thaps3131;rank=6 chr3 ensembl protein_coding_gene 203646 204800 . + . ID=Thaps32555;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW6];external_name=Thaps32555;logic_name=jgi_thaps3 chr3 ensembl transcript 203646 204800 . + . ID=Thaps32555;Parent=Thaps32555;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 203646 203750 . + 0 ID=Thaps32555;Parent=Thaps32555;rank=1 chr3 . exon 203646 203750 . + . ID=Thaps32555.1;Parent=Thaps32555;constitutive=1;rank=1 chr3 . CDS 203898 204800 . + 0 ID=Thaps32555;Parent=Thaps32555;rank=2 chr3 . exon 203898 204800 . + . ID=Thaps32555.2;Parent=Thaps32555;constitutive=1;rank=2 chr3 . repeat_region 211391 211400 . ? . description=dust chr3 ensembl protein_coding_gene 214806 216255 . + . ID=Thaps21611;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWX0];external_name=Thaps21611;logic_name=jgi_thaps3 chr3 ensembl transcript 214806 216255 . + . ID=Thaps21611;Parent=Thaps21611;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 214806 215210 . + 0 ID=Thaps21611;Parent=Thaps21611;rank=1 chr3 . exon 214806 215210 . + . ID=Thaps21611.1;Parent=Thaps21611;constitutive=1;rank=1 chr3 . CDS 215310 215541 . + 0 ID=Thaps21611;Parent=Thaps21611;rank=2 chr3 . exon 215310 215541 . + . ID=Thaps21611.2;Parent=Thaps21611;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 215651 216255 . + 0 ID=Thaps21611;Parent=Thaps21611;rank=3 chr3 . exon 215651 216255 . + . ID=Thaps21611.3;Parent=Thaps21611;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 212762 213346 . + . ID=Thaps268408;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW9];external_name=Thaps268408;logic_name=jgi_thaps3 chr3 ensembl transcript 212762 213346 . + . ID=Thaps268408;Parent=Thaps268408;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 212762 213220 . + 0 ID=Thaps268408;Parent=Thaps268408;rank=1 chr3 . exon 212762 213220 . + . ID=Thaps268408.1;Parent=Thaps268408;constitutive=1;rank=1 chr3 . CDS 213296 213346 . + 0 ID=Thaps268408;Parent=Thaps268408;rank=2 chr3 . exon 213296 213346 . + . ID=Thaps268408.2;Parent=Thaps268408;constitutive=1;rank=2 chr3 . exon 209260 209373 . + . ID=Thaps3131.4;Parent=Thaps3131;constitutive=1;rank=4 chr3 . exon 209451 209597 . + . ID=Thaps3131.5;Parent=Thaps3131;constitutive=1;rank=5 chr3 . exon 209707 209933 . + . ID=Thaps3131.6;Parent=Thaps3131;constitutive=1;ensembl_end_phase=2;rank=6 chr3 ensembl protein_coding_gene 210281 210958 . - . ID=Thaps3132;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWW8];external_name=Thaps3132;logic_name=jgi_thaps3 chr3 ensembl transcript 210281 210958 . - . ID=Thaps3132;Parent=Thaps3132;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 210281 210958 . - 0 ID=Thaps3132;Parent=Thaps3132;rank=1 chr3 . exon 210281 210958 . - . ID=Thaps3132.1;Parent=Thaps3132;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 216352 217860 . - . ID=Thaps3135;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWX1];external_name=Thaps3135;logic_name=jgi_thaps3 chr3 ensembl transcript 216352 217860 . - . ID=Thaps3135;Parent=Thaps3135;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 216352 217298 . - 0 ID=Thaps3135;Parent=Thaps3135;rank=2 chr3 . exon 216352 217298 . - . ID=Thaps3135.2;Parent=Thaps3135;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 217443 217860 . - 0 ID=Thaps3135;Parent=Thaps3135;rank=1 chr3 . exon 217443 217860 . - . ID=Thaps3135.1;Parent=Thaps3135;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 218052 219113 . + . ID=Thaps3136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWX2];external_name=Thaps3136;logic_name=jgi_thaps3 chr3 ensembl transcript 218052 219113 . + . ID=Thaps3136;Parent=Thaps3136;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 218052 219113 . + 0 ID=Thaps3136;Parent=Thaps3136;rank=1 chr3 . exon 218052 219113 . + . ID=Thaps3136.1;Parent=Thaps3136;constitutive=1;rank=1 chr3 . repeat_region 223176 223217 . ? . description=trf chr3 ensembl protein_coding_gene 221292 224836 . + . ID=Thaps21612;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWX4];external_name=Thaps21612;logic_name=jgi_thaps3 chr3 ensembl transcript 221292 224836 . + . ID=Thaps21612;Parent=Thaps21612;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 221292 221399 . + 0 ID=Thaps21612;Parent=Thaps21612;rank=1 chr3 . exon 221292 221399 . + . ID=Thaps21612.1;Parent=Thaps21612;constitutive=1;rank=1 chr3 . CDS 221485 221749 . + 0 ID=Thaps21612;Parent=Thaps21612;rank=2 chr3 . exon 221485 221749 . + . ID=Thaps21612.2;Parent=Thaps21612;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 221852 222150 . + 0 ID=Thaps21612;Parent=Thaps21612;rank=3 chr3 . exon 221852 222150 . + . ID=Thaps21612.3;Parent=Thaps21612;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 222229 223153 . + 0 ID=Thaps21612;Parent=Thaps21612;rank=4 chr3 . exon 222229 223153 . + . ID=Thaps21612.4;Parent=Thaps21612;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 223245 223665 . + 0 ID=Thaps21612;Parent=Thaps21612;rank=5 chr3 . exon 223245 223665 . + . ID=Thaps21612.5;Parent=Thaps21612;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 223748 223865 . + 0 ID=Thaps21612;Parent=Thaps21612;rank=6 chr3 . exon 223748 223865 . + . ID=Thaps21612.6;Parent=Thaps21612;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 223945 224141 . + 0 ID=Thaps21612;Parent=Thaps21612;rank=7 chr3 . exon 223945 224141 . + . ID=Thaps21612.7;Parent=Thaps21612;constitutive=1;ensembl_end_phase=2;rank=7 chr3 . CDS 224220 224288 . + 0 ID=Thaps21612;Parent=Thaps21612;rank=8 chr3 . exon 224220 224288 . + . ID=Thaps21612.8;Parent=Thaps21612;constitutive=1;rank=8 chr3 . CDS 224365 224836 . + 0 ID=Thaps21612;Parent=Thaps21612;rank=9 chr3 . exon 224365 224836 . + . ID=Thaps21612.9;Parent=Thaps21612;constitutive=1;ensembl_end_phase=1;rank=9 chr3 ensembl protein_coding_gene 228839 230844 . + . ID=Thaps21613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWX6];external_name=Thaps21613;logic_name=jgi_thaps3 chr3 ensembl transcript 228839 230844 . + . ID=Thaps21613;Parent=Thaps21613;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 228839 229081 . + 0 ID=Thaps21613;Parent=Thaps21613;rank=1 chr3 . exon 228839 229081 . + . ID=Thaps21613.1;Parent=Thaps21613;constitutive=1;rank=1 chr3 . CDS 229189 230844 . + 0 ID=Thaps21613;Parent=Thaps21613;rank=2 chr3 ensembl protein_coding_gene 219533 219898 . - . ID=Thaps3137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWX3];external_name=Thaps3137;logic_name=jgi_thaps3 chr3 ensembl transcript 219533 219898 . - . ID=Thaps3137;Parent=Thaps3137;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 219533 219898 . - 0 ID=Thaps3137;Parent=Thaps3137;rank=1 chr3 . exon 219533 219898 . - . ID=Thaps3137.1;Parent=Thaps3137;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 225407 228255 . - . ID=Thaps3139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWX5];external_name=Thaps3139;logic_name=jgi_thaps3 chr3 ensembl transcript 225407 228255 . - . ID=Thaps3139;Parent=Thaps3139;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 225407 225443 . - 0 ID=Thaps3139;Parent=Thaps3139;rank=4 chr3 . exon 225407 225443 . - . ID=Thaps3139.4;Parent=Thaps3139;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 225515 226153 . - 0 ID=Thaps3139;Parent=Thaps3139;rank=3 chr3 . exon 225515 226153 . - . ID=Thaps3139.3;Parent=Thaps3139;constitutive=1;rank=3 chr3 . CDS 226244 226363 . - 0 ID=Thaps3139;Parent=Thaps3139;rank=2 chr3 . exon 226244 226363 . - . ID=Thaps3139.2;Parent=Thaps3139;constitutive=1;rank=2 chr3 . CDS 226475 228255 . - 0 ID=Thaps3139;Parent=Thaps3139;rank=1 chr3 . exon 226475 228255 . - . ID=Thaps3139.1;Parent=Thaps3139;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . repeat_region 235784 235841 . ? . description=dust chr3 . repeat_region 236218 236264 . ? . description=dust chr3 . exon 229189 230844 . + . ID=Thaps21613.2;Parent=Thaps21613;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 233893 234648 . + . ID=Thaps3141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWX7];external_name=Thaps3141;logic_name=jgi_thaps3 chr3 ensembl transcript 233893 234648 . + . ID=Thaps3141;Parent=Thaps3141;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 233893 234648 . + 0 ID=Thaps3141;Parent=Thaps3141;rank=1 chr3 . exon 233893 234648 . + . ID=Thaps3141.1;Parent=Thaps3141;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 234915 236123 . - . ID=Thaps3142;biotype=protein_coding;description=Mitochondrial carrier-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWX8];external_name=Thaps3142;logic_name=jgi_thaps3 chr3 ensembl transcript 234915 236123 . - . ID=Thaps3142;Parent=Thaps3142;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 234915 236123 . - 0 ID=Thaps3142;Parent=Thaps3142;rank=1 chr3 . exon 234915 236123 . - . ID=Thaps3142.1;Parent=Thaps3142;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 236456 237989 . + . ID=Thaps3143;biotype=protein_coding;description=Microsomal omega-6 fatty acid desaturase [Source:UniProtKB/TrEMBL%3BAcc:B8BWX9];external_name=DES9;logic_name=jgi_thaps3 chr3 ensembl transcript 236456 237989 . + . ID=Thaps3143;Parent=Thaps3143;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 236456 237516 . + 0 ID=Thaps3143;Parent=Thaps3143;rank=1 chr3 . exon 236456 237516 . + . ID=Thaps3143.1;Parent=Thaps3143;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 237629 237989 . + 0 ID=Thaps3143;Parent=Thaps3143;rank=2 chr3 . exon 237629 237989 . + . ID=Thaps3143.2;Parent=Thaps3143;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 241572 242549 . + . ID=Thaps261650;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWY1];external_name=Thaps261650;logic_name=jgi_thaps3 chr3 ensembl transcript 241572 242549 . + . ID=Thaps261650;Parent=Thaps261650;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 241572 241901 . + 0 ID=Thaps261650;Parent=Thaps261650;rank=1 chr3 . exon 241572 241901 . + . ID=Thaps261650.1;Parent=Thaps261650;constitutive=1;rank=1 chr3 . CDS 241953 242144 . + 0 ID=Thaps261650;Parent=Thaps261650;rank=2 chr3 . exon 241953 242144 . + . ID=Thaps261650.2;Parent=Thaps261650;constitutive=1;rank=2 chr3 . CDS 242256 242549 . + 0 ID=Thaps261650;Parent=Thaps261650;rank=3 chr3 . exon 242256 242549 . + . ID=Thaps261650.3;Parent=Thaps261650;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 239172 240484 . - . ID=Thaps268410;biotype=protein_coding;description=Cyclin dependent kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BWY0];external_name=CDK1;logic_name=jgi_thaps3 chr3 ensembl transcript 239172 240484 . - . ID=Thaps268410;Parent=Thaps268410;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 239172 239499 . - 0 ID=Thaps268410;Parent=Thaps268410;rank=4 chr3 . exon 239172 239499 . - . ID=Thaps268410.4;Parent=Thaps268410;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 239588 239772 . - 0 ID=Thaps268410;Parent=Thaps268410;rank=3 chr3 . exon 239588 239772 . - . ID=Thaps268410.3;Parent=Thaps268410;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 239872 240121 . - 0 ID=Thaps268410;Parent=Thaps268410;rank=2 chr3 . exon 239872 240121 . - . ID=Thaps268410.2;Parent=Thaps268410;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 240324 240484 . - 0 ID=Thaps268410;Parent=Thaps268410;rank=1 chr3 . exon 240324 240484 . - . ID=Thaps268410.1;Parent=Thaps268410;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 245305 246101 . + . ID=Thaps268412;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWY4];external_name=Thaps268412;logic_name=jgi_thaps3 chr3 ensembl transcript 245305 246101 . + . ID=Thaps268412;Parent=Thaps268412;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 245305 245565 . + 0 ID=Thaps268412;Parent=Thaps268412;rank=1 chr3 . exon 245305 245565 . + . ID=Thaps268412.1;Parent=Thaps268412;constitutive=1;rank=1 chr3 . CDS 245743 245893 . + 0 ID=Thaps268412;Parent=Thaps268412;rank=2 chr3 . exon 245743 245893 . + . ID=Thaps268412.2;Parent=Thaps268412;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 245986 246101 . + 0 ID=Thaps268412;Parent=Thaps268412;rank=3 chr3 . exon 245986 246101 . + . ID=Thaps268412.3;Parent=Thaps268412;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 243421 244155 . + . ID=Thaps3146;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWY3];external_name=Thaps3146;logic_name=jgi_thaps3 chr3 ensembl transcript 243421 244155 . + . ID=Thaps3146;Parent=Thaps3146;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 243421 244155 . + 0 ID=Thaps3146;Parent=Thaps3146;rank=1 chr3 . exon 243421 244155 . + . ID=Thaps3146.1;Parent=Thaps3146;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 246179 247633 . - . ID=Thaps3148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWY5];external_name=Thaps3148;logic_name=jgi_thaps3 chr3 ensembl transcript 246179 247633 . - . ID=Thaps3148;Parent=Thaps3148;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 246179 246774 . - 0 ID=Thaps3148;Parent=Thaps3148;rank=3 chr3 . exon 246179 246774 . - . ID=Thaps3148.3;Parent=Thaps3148;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 246884 247115 . - 0 ID=Thaps3148;Parent=Thaps3148;rank=2 chr3 . exon 246884 247115 . - . ID=Thaps3148.2;Parent=Thaps3148;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 247214 247633 . - 0 ID=Thaps3148;Parent=Thaps3148;rank=1 chr3 . exon 247214 247633 . - . ID=Thaps3148.1;Parent=Thaps3148;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 248142 249473 . + . ID=Thaps3149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWY6];external_name=Thaps3149;logic_name=jgi_thaps3 chr3 ensembl transcript 248142 249473 . + . ID=Thaps3149;Parent=Thaps3149;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 248142 248308 . + 0 ID=Thaps3149;Parent=Thaps3149;rank=1 chr3 . exon 248142 248308 . + . ID=Thaps3149.1;Parent=Thaps3149;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 248398 249400 . + 0 ID=Thaps3149;Parent=Thaps3149;rank=2 chr3 . exon 248398 249400 . + . ID=Thaps3149.2;Parent=Thaps3149;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 249435 249473 . + 0 ID=Thaps3149;Parent=Thaps3149;rank=3 chr3 ensembl protein_coding_gene 242740 243039 . - . ID=Thaps32668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWY2];external_name=Thaps32668;logic_name=jgi_thaps3 chr3 ensembl transcript 242740 243039 . - . ID=Thaps32668;Parent=Thaps32668;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 242740 243039 . - 0 ID=Thaps32668;Parent=Thaps32668;rank=1 chr3 . exon 242740 243039 . - . ID=Thaps32668.1;Parent=Thaps32668;constitutive=1;rank=1 chr3 . repeat_region 255752 255786 . ? . description=trf chr3 . repeat_region 255752 255786 . ? . description=dust chr3 . biological_region 256764 256766 0.999 + . logic_name=eponine chr3 . repeat_region 256951 256985 . ? . description=dust chr3 ensembl protein_coding_gene 250088 250957 . + . ID=Thaps21617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWY7];external_name=Thaps21617;logic_name=jgi_thaps3 chr3 ensembl transcript 250088 250957 . + . ID=Thaps21617;Parent=Thaps21617;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 250088 250957 . + 0 ID=Thaps21617;Parent=Thaps21617;rank=1 chr3 . exon 250088 250957 . + . ID=Thaps21617.1;Parent=Thaps21617;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 253751 255986 . - . ID=Thaps21619;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWY9];external_name=Thaps21619;logic_name=jgi_thaps3 chr3 ensembl transcript 253751 255986 . - . ID=Thaps21619;Parent=Thaps21619;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 253751 254393 . - 0 ID=Thaps21619;Parent=Thaps21619;rank=2 chr3 . exon 253751 254393 . - . ID=Thaps21619.2;Parent=Thaps21619;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 254485 255986 . - 0 ID=Thaps21619;Parent=Thaps21619;rank=1 chr3 . exon 254485 255986 . - . ID=Thaps21619.1;Parent=Thaps21619;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . exon 249435 249473 . + . ID=Thaps3149.3;Parent=Thaps3149;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 256824 257246 . + . ID=Thaps3153;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ0];external_name=Thaps3153;logic_name=jgi_thaps3 chr3 ensembl transcript 256824 257246 . + . ID=Thaps3153;Parent=Thaps3153;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 256824 257246 . + 0 ID=Thaps3153;Parent=Thaps3153;rank=1 chr3 . exon 256824 257246 . + . ID=Thaps3153.1;Parent=Thaps3153;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 257904 259893 . - . ID=Thaps3154;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ1];external_name=Thaps3154;logic_name=jgi_thaps3 chr3 ensembl transcript 257904 259893 . - . ID=Thaps3154;Parent=Thaps3154;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 257904 259334 . - 0 ID=Thaps3154;Parent=Thaps3154;rank=2 chr3 . exon 257904 259334 . - . ID=Thaps3154.2;Parent=Thaps3154;constitutive=1;rank=2 chr3 . CDS 259768 259893 . - 0 ID=Thaps3154;Parent=Thaps3154;rank=1 chr3 ensembl protein_coding_gene 251742 252728 . - . ID=Thaps33088;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWY8];external_name=Thaps33088;logic_name=jgi_thaps3 chr3 ensembl transcript 251742 252728 . - . ID=Thaps33088;Parent=Thaps33088;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 251742 252728 . - 0 ID=Thaps33088;Parent=Thaps33088;rank=1 chr3 . exon 251742 252728 . - . ID=Thaps33088.1;Parent=Thaps33088;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 260848 261828 . - . ID=Thaps21620;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ2];external_name=Thaps21620;logic_name=jgi_thaps3 chr3 ensembl transcript 260848 261828 . - . ID=Thaps21620;Parent=Thaps21620;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 260848 261828 . - 0 ID=Thaps21620;Parent=Thaps21620;rank=1 chr3 . exon 260848 261828 . - . ID=Thaps21620.1;Parent=Thaps21620;constitutive=1;rank=1 chr3 . exon 259768 259893 . - . ID=Thaps3154.1;Parent=Thaps3154;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 265017 266159 . - . ID=Thaps3157;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ4];external_name=Thaps3157;logic_name=jgi_thaps3 chr3 ensembl transcript 265017 266159 . - . ID=Thaps3157;Parent=Thaps3157;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 265017 266159 . - 0 ID=Thaps3157;Parent=Thaps3157;rank=1 chr3 . exon 265017 266159 . - . ID=Thaps3157.1;Parent=Thaps3157;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 268378 276418 . + . ID=Thaps3158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ5];external_name=Thaps3158;logic_name=jgi_thaps3 chr3 ensembl transcript 268378 276418 . + . ID=Thaps3158;Parent=Thaps3158;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 268378 270186 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=1 chr3 . exon 268378 270186 . + . ID=Thaps3158.1;Parent=Thaps3158;constitutive=1;rank=1 chr3 . CDS 270259 270827 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=2 chr3 . CDS 270914 271087 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=3 chr3 . CDS 271166 271486 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=4 chr3 . CDS 271574 271914 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=5 chr3 . CDS 272011 272636 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=6 chr3 . CDS 272719 273952 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=7 chr3 . CDS 274030 274220 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=8 chr3 . CDS 274317 274509 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=9 chr3 . CDS 274583 274627 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=10 chr3 . CDS 274710 274779 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=11 chr3 . CDS 274863 275061 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=12 chr3 . CDS 275139 275211 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=13 chr3 . CDS 275288 275505 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=14 chr3 . CDS 275585 275809 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=15 chr3 . CDS 275891 276418 . + 0 ID=Thaps3158;Parent=Thaps3158;rank=16 chr3 ensembl protein_coding_gene 263040 264494 . + . ID=Thaps33252;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ3];external_name=Thaps33252;logic_name=jgi_thaps3 chr3 ensembl transcript 263040 264494 . + . ID=Thaps33252;Parent=Thaps33252;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 263040 263237 . + 0 ID=Thaps33252;Parent=Thaps33252;rank=1 chr3 . exon 263040 263237 . + . ID=Thaps33252.1;Parent=Thaps33252;constitutive=1;rank=1 chr3 . CDS 263346 263668 . + 0 ID=Thaps33252;Parent=Thaps33252;rank=2 chr3 . exon 263346 263668 . + . ID=Thaps33252.2;Parent=Thaps33252;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 263789 264494 . + 0 ID=Thaps33252;Parent=Thaps33252;rank=3 chr3 . exon 263789 264494 . + . ID=Thaps33252.3;Parent=Thaps33252;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . repeat_region 269391 269454 . ? . description=dust chr3 . repeat_region 269506 269525 . ? . description=trf chr3 . exon 270259 270827 . + . ID=Thaps3158.2;Parent=Thaps3158;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 270914 271087 . + . ID=Thaps3158.3;Parent=Thaps3158;constitutive=1;rank=3 chr3 . exon 271166 271486 . + . ID=Thaps3158.4;Parent=Thaps3158;constitutive=1;rank=4 chr3 . exon 271574 271914 . + . ID=Thaps3158.5;Parent=Thaps3158;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . exon 272011 272636 . + . ID=Thaps3158.6;Parent=Thaps3158;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . exon 272719 273952 . + . ID=Thaps3158.7;Parent=Thaps3158;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . exon 274030 274220 . + . ID=Thaps3158.8;Parent=Thaps3158;constitutive=1;ensembl_end_phase=2;rank=8 chr3 . exon 274317 274509 . + . ID=Thaps3158.9;Parent=Thaps3158;constitutive=1;ensembl_end_phase=1;rank=9 chr3 . exon 274583 274627 . + . ID=Thaps3158.10;Parent=Thaps3158;constitutive=1;rank=10 chr3 . exon 274710 274779 . + . ID=Thaps3158.11;Parent=Thaps3158;constitutive=1;ensembl_end_phase=1;rank=11 chr3 . exon 274863 275061 . + . ID=Thaps3158.12;Parent=Thaps3158;constitutive=1;ensembl_end_phase=1;rank=12 chr3 . exon 275139 275211 . + . ID=Thaps3158.13;Parent=Thaps3158;constitutive=1;ensembl_end_phase=1;rank=13 chr3 . exon 275288 275505 . + . ID=Thaps3158.14;Parent=Thaps3158;constitutive=1;ensembl_end_phase=2;rank=14 chr3 . exon 275585 275809 . + . ID=Thaps3158.15;Parent=Thaps3158;constitutive=1;rank=15 chr3 . exon 275891 276418 . + . ID=Thaps3158.16;Parent=Thaps3158;constitutive=1;rank=16 chr3 ensembl protein_coding_gene 276536 278146 . - . ID=Thaps3159;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ6];external_name=Thaps3159;logic_name=jgi_thaps3 chr3 ensembl transcript 276536 278146 . - . ID=Thaps3159;Parent=Thaps3159;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 276536 277976 . - 0 ID=Thaps3159;Parent=Thaps3159;rank=2 chr3 . exon 276536 277976 . - . ID=Thaps3159.2;Parent=Thaps3159;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 278052 278146 . - 0 ID=Thaps3159;Parent=Thaps3159;rank=1 chr3 . exon 278052 278146 . - . ID=Thaps3159.1;Parent=Thaps3159;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 278541 279730 . + . ID=Thaps3160;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ7];external_name=Thaps3160;logic_name=jgi_thaps3 chr3 ensembl transcript 278541 279730 . + . ID=Thaps3160;Parent=Thaps3160;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 278541 278587 . + 0 ID=Thaps3160;Parent=Thaps3160;rank=1 chr3 . exon 278541 278587 . + . ID=Thaps3160.1;Parent=Thaps3160;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 278638 279730 . + 0 ID=Thaps3160;Parent=Thaps3160;rank=2 chr3 . exon 278638 279730 . + . ID=Thaps3160.2;Parent=Thaps3160;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 282955 286482 . - . ID=Thaps21622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ9];external_name=Thaps21622;logic_name=jgi_thaps3 chr3 ensembl transcript 282955 286482 . - . ID=Thaps21622;Parent=Thaps21622;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 282955 283151 . - 0 ID=Thaps21622;Parent=Thaps21622;rank=5 chr3 . exon 282955 283151 . - . ID=Thaps21622.5;Parent=Thaps21622;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 283234 283948 . - 0 ID=Thaps21622;Parent=Thaps21622;rank=4 chr3 . exon 283234 283948 . - . ID=Thaps21622.4;Parent=Thaps21622;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 284027 284489 . - 0 ID=Thaps21622;Parent=Thaps21622;rank=3 chr3 . exon 284027 284489 . - . ID=Thaps21622.3;Parent=Thaps21622;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 284573 284751 . - 0 ID=Thaps21622;Parent=Thaps21622;rank=2 chr3 . exon 284573 284751 . - . ID=Thaps21622.2;Parent=Thaps21622;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 284827 286482 . - 0 ID=Thaps21622;Parent=Thaps21622;rank=1 chr3 . exon 284827 286482 . - . ID=Thaps21622.1;Parent=Thaps21622;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 281430 282848 . + . ID=Thaps3161;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWZ8];external_name=Thaps3161;logic_name=jgi_thaps3 chr3 ensembl transcript 281430 282848 . + . ID=Thaps3161;Parent=Thaps3161;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 281430 282848 . + 0 ID=Thaps3161;Parent=Thaps3161;rank=1 chr3 . exon 281430 282848 . + . ID=Thaps3161.1;Parent=Thaps3161;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 287018 288999 . + . ID=Thaps3163;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX00];external_name=Thaps3163;logic_name=jgi_thaps3 chr3 ensembl transcript 287018 288999 . + . ID=Thaps3163;Parent=Thaps3163;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 287018 287435 . + 0 ID=Thaps3163;Parent=Thaps3163;rank=1 chr3 . exon 287018 287435 . + . ID=Thaps3163.1;Parent=Thaps3163;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 287612 288999 . + 0 ID=Thaps3163;Parent=Thaps3163;rank=2 chr3 . exon 287612 288999 . + . ID=Thaps3163.2;Parent=Thaps3163;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . repeat_region 289451 289470 . ? . description=trf chr3 . biological_region 289589 289594 0.999 - . logic_name=eponine chr3 . biological_region 289651 289653 0.999 - . logic_name=eponine chr3 . repeat_region 290099 290107 . ? . description=dust chr3 . repeat_region 294776 294796 . ? . description=trf chr3 . repeat_region 294776 294796 . ? . description=dust chr3 . repeat_region 295445 295452 . ? . description=dust chr3 ensembl protein_coding_gene 290700 292088 . - . ID=Thaps21623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX02];external_name=Thaps21623;logic_name=jgi_thaps3 chr3 ensembl transcript 290700 292088 . - . ID=Thaps21623;Parent=Thaps21623;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 290700 291160 . - 0 ID=Thaps21623;Parent=Thaps21623;rank=2 chr3 . exon 290700 291160 . - . ID=Thaps21623.2;Parent=Thaps21623;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 291254 292088 . - 0 ID=Thaps21623;Parent=Thaps21623;rank=1 chr3 . exon 291254 292088 . - . ID=Thaps21623.1;Parent=Thaps21623;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 297600 300312 . - . ID=Thaps261657;biotype=protein_coding;description=Heavy-metal transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BX05];external_name=Thaps261657;logic_name=jgi_thaps3 chr3 ensembl transcript 297600 300312 . - . ID=Thaps261657;Parent=Thaps261657;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 297600 297936 . - 0 ID=Thaps261657;Parent=Thaps261657;rank=5 chr3 . exon 297600 297936 . - . ID=Thaps261657.5;Parent=Thaps261657;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 297979 298481 . - 0 ID=Thaps261657;Parent=Thaps261657;rank=4 chr3 . exon 297979 298481 . - . ID=Thaps261657.4;Parent=Thaps261657;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 298563 298675 . - 0 ID=Thaps261657;Parent=Thaps261657;rank=3 chr3 . exon 298563 298675 . - . ID=Thaps261657.3;Parent=Thaps261657;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 298744 299669 . - 0 ID=Thaps261657;Parent=Thaps261657;rank=2 chr3 . exon 298744 299669 . - . ID=Thaps261657.2;Parent=Thaps261657;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 300096 300312 . - 0 ID=Thaps261657;Parent=Thaps261657;rank=1 chr3 ensembl protein_coding_gene 294470 294799 . + . ID=Thaps3166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX03];external_name=Thaps3166;logic_name=jgi_thaps3 chr3 ensembl transcript 294470 294799 . + . ID=Thaps3166;Parent=Thaps3166;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 294470 294799 . + 0 ID=Thaps3166;Parent=Thaps3166;rank=1 chr3 . exon 294470 294799 . + . ID=Thaps3166.1;Parent=Thaps3166;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 295297 297084 . - . ID=Thaps3167;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX04];external_name=Thaps3167;logic_name=jgi_thaps3 chr3 ensembl transcript 295297 297084 . - . ID=Thaps3167;Parent=Thaps3167;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 295297 297084 . - 0 ID=Thaps3167;Parent=Thaps3167;rank=1 chr3 . exon 295297 297084 . - . ID=Thaps3167.1;Parent=Thaps3167;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 289473 289979 . + . ID=Thaps32914;biotype=protein_coding;description=Ubiquinol-cytochrome c reductase iron-sulfur subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BX01];external_name=RISP1;logic_name=jgi_thaps3 chr3 ensembl transcript 289473 289979 . + . ID=Thaps32914;Parent=Thaps32914;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 289473 289979 . + 0 ID=Thaps32914;Parent=Thaps32914;rank=1 chr3 . exon 289473 289979 . + . ID=Thaps32914.1;Parent=Thaps32914;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 303277 304020 . - . ID=Thaps26146;biotype=protein_coding;description=14-3-3-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX06];external_name=Thaps26146;logic_name=jgi_thaps3 chr3 ensembl transcript 303277 304020 . - . ID=Thaps26146;Parent=Thaps26146;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 303277 304020 . - 0 ID=Thaps26146;Parent=Thaps26146;rank=1 chr3 . exon 303277 304020 . - . ID=Thaps26146.1;Parent=Thaps26146;constitutive=1;rank=1 chr3 . exon 300096 300312 . - . ID=Thaps261657.1;Parent=Thaps261657;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 305137 305991 . + . ID=Thaps32760;biotype=protein_coding;description=3'%2C5'-cyclic amp phosphodiesterase [Source:UniProtKB/TrEMBL%3BAcc:B8BX07];external_name=Thaps32760;logic_name=jgi_thaps3 chr3 ensembl transcript 305137 305991 . + . ID=Thaps32760;Parent=Thaps32760;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 305137 305991 . + 0 ID=Thaps32760;Parent=Thaps32760;rank=1 chr3 . exon 305137 305991 . + . ID=Thaps32760.1;Parent=Thaps32760;constitutive=1;rank=1 chr3 . repeat_region 311800 311848 . ? . description=trf chr3 . repeat_region 313411 313440 . ? . description=trf chr3 . repeat_region 313411 313440 . ? . description=trf chr3 . repeat_region 318606 318625 . ? . description=trf chr3 ensembl protein_coding_gene 314834 316057 . - . ID=Thaps16241;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX11];external_name=Thaps16241;logic_name=jgi_thaps3 chr3 ensembl transcript 314834 316057 . - . ID=Thaps16241;Parent=Thaps16241;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 314834 315038 . - 0 ID=Thaps16241;Parent=Thaps16241;rank=4 chr3 . exon 314834 315038 . - . ID=Thaps16241.4;Parent=Thaps16241;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 315117 315477 . - 0 ID=Thaps16241;Parent=Thaps16241;rank=3 chr3 . exon 315117 315477 . - . ID=Thaps16241.3;Parent=Thaps16241;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 315592 315886 . - 0 ID=Thaps16241;Parent=Thaps16241;rank=2 chr3 . exon 315592 315886 . - . ID=Thaps16241.2;Parent=Thaps16241;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 315977 316057 . - 0 ID=Thaps16241;Parent=Thaps16241;rank=1 chr3 . exon 315977 316057 . - . ID=Thaps16241.1;Parent=Thaps16241;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 308947 310050 . - . ID=Thaps261660;biotype=protein_coding;description=Chitinase [Source:UniProtKB/TrEMBL%3BAcc:B8BX08];external_name=Thaps261660;logic_name=jgi_thaps3 chr3 ensembl transcript 308947 310050 . - . ID=Thaps261660;Parent=Thaps261660;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 308947 309592 . - 0 ID=Thaps261660;Parent=Thaps261660;rank=2 chr3 . exon 308947 309592 . - . ID=Thaps261660.2;Parent=Thaps261660;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 309693 310050 . - 0 ID=Thaps261660;Parent=Thaps261660;rank=1 chr3 . exon 309693 310050 . - . ID=Thaps261660.1;Parent=Thaps261660;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 311859 312560 . + . ID=Thaps261661;biotype=protein_coding;description=RM4%2C ribosomal protein 4 [Source:UniProtKB/TrEMBL%3BAcc:B8BX09];external_name=RM4;logic_name=jgi_thaps3 chr3 ensembl transcript 311859 312560 . + . ID=Thaps261661;Parent=Thaps261661;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 311859 312297 . + 0 ID=Thaps261661;Parent=Thaps261661;rank=1 chr3 . exon 311859 312297 . + . ID=Thaps261661.1;Parent=Thaps261661;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 312403 312560 . + 0 ID=Thaps261661;Parent=Thaps261661;rank=2 chr3 . exon 312403 312560 . + . ID=Thaps261661.2;Parent=Thaps261661;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 313494 314716 . - . ID=Thaps32983;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX10];external_name=Thaps32983;logic_name=jgi_thaps3 chr3 ensembl transcript 313494 314716 . - . ID=Thaps32983;Parent=Thaps32983;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 313494 314224 . - 0 ID=Thaps32983;Parent=Thaps32983;rank=3 chr3 . exon 313494 314224 . - . ID=Thaps32983.3;Parent=Thaps32983;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 314311 314505 . - 0 ID=Thaps32983;Parent=Thaps32983;rank=2 chr3 . exon 314311 314505 . - . ID=Thaps32983.2;Parent=Thaps32983;constitutive=1;rank=2 chr3 . CDS 314593 314716 . - 0 ID=Thaps32983;Parent=Thaps32983;rank=1 chr3 . exon 314593 314716 . - . ID=Thaps32983.1;Parent=Thaps32983;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 322028 322052 . ? . description=dust chr3 . repeat_region 323163 323182 . ? . description=dust chr3 ensembl protein_coding_gene 320596 321983 . - . ID=Thaps21629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX13];external_name=Thaps21629;logic_name=jgi_thaps3 chr3 ensembl transcript 320596 321983 . - . ID=Thaps21629;Parent=Thaps21629;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 320596 321044 . - 0 ID=Thaps21629;Parent=Thaps21629;rank=2 chr3 . exon 320596 321044 . - . ID=Thaps21629.2;Parent=Thaps21629;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 321149 321983 . - 0 ID=Thaps21629;Parent=Thaps21629;rank=1 chr3 . exon 321149 321983 . - . ID=Thaps21629.1;Parent=Thaps21629;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 327634 328980 . - . ID=Thaps268417;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX15];external_name=Thaps268417;logic_name=jgi_thaps3 chr3 ensembl transcript 327634 328980 . - . ID=Thaps268417;Parent=Thaps268417;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 327634 328980 . - 0 ID=Thaps268417;Parent=Thaps268417;rank=1 chr3 . exon 327634 328980 . - . ID=Thaps268417.1;Parent=Thaps268417;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 319318 319940 . + . ID=Thaps3174;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX12];external_name=Thaps3174;logic_name=jgi_thaps3 chr3 ensembl transcript 319318 319940 . + . ID=Thaps3174;Parent=Thaps3174;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 319318 319471 . + 0 ID=Thaps3174;Parent=Thaps3174;rank=1 chr3 . exon 319318 319471 . + . ID=Thaps3174.1;Parent=Thaps3174;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 319528 319940 . + 0 ID=Thaps3174;Parent=Thaps3174;rank=2 chr3 . exon 319528 319940 . + . ID=Thaps3174.2;Parent=Thaps3174;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 324380 327211 . - . ID=Thaps3176;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX14];external_name=Thaps3176;logic_name=jgi_thaps3 chr3 ensembl transcript 324380 327211 . - . ID=Thaps3176;Parent=Thaps3176;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 324380 327211 . - 0 ID=Thaps3176;Parent=Thaps3176;rank=1 chr3 . exon 324380 327211 . - . ID=Thaps3176.1;Parent=Thaps3176;constitutive=1;rank=1 chr3 . repeat_region 329397 329443 . ? . description=trf chr3 . repeat_region 337926 338649 . ? . description=trf chr3 ensembl protein_coding_gene 337206 337568 . + . ID=Thaps27352;biotype=protein_coding;description=Histone H2B [Source:UniProtKB/TrEMBL%3BAcc:B8BX20];external_name=Thaps27352;logic_name=jgi_thaps3 chr3 ensembl transcript 337206 337568 . + . ID=Thaps27352;Parent=Thaps27352;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 337206 337568 . + 0 ID=Thaps27352;Parent=Thaps27352;rank=1 chr3 . exon 337206 337568 . + . ID=Thaps27352.1;Parent=Thaps27352;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 332329 334443 . - . ID=Thaps3179;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX17];external_name=Thaps3179;logic_name=jgi_thaps3 chr3 ensembl transcript 332329 334443 . - . ID=Thaps3179;Parent=Thaps3179;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 332329 334443 . - 0 ID=Thaps3179;Parent=Thaps3179;rank=1 chr3 . exon 332329 334443 . - . ID=Thaps3179.1;Parent=Thaps3179;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 334847 336085 . + . ID=Thaps3180;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX18];external_name=Thaps3180;logic_name=jgi_thaps3 chr3 ensembl transcript 334847 336085 . + . ID=Thaps3180;Parent=Thaps3180;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 334847 336085 . + 0 ID=Thaps3180;Parent=Thaps3180;rank=1 chr3 . exon 334847 336085 . + . ID=Thaps3180.1;Parent=Thaps3180;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 329498 331148 . + . ID=Thaps32736;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX16];external_name=Thaps32736;logic_name=jgi_thaps3 chr3 ensembl transcript 329498 331148 . + . ID=Thaps32736;Parent=Thaps32736;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 329498 329583 . + 0 ID=Thaps32736;Parent=Thaps32736;rank=1 chr3 . exon 329498 329583 . + . ID=Thaps32736.1;Parent=Thaps32736;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 329867 331148 . + 0 ID=Thaps32736;Parent=Thaps32736;rank=2 chr3 . exon 329867 331148 . + . ID=Thaps32736.2;Parent=Thaps32736;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 336483 336857 . - . ID=Thaps33270;biotype=protein_coding;description=Histone H2A [Source:UniProtKB/TrEMBL%3BAcc:B8BX19];external_name=Thaps33270;logic_name=jgi_thaps3 chr3 ensembl transcript 336483 336857 . - . ID=Thaps33270;Parent=Thaps33270;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 336483 336857 . - 0 ID=Thaps33270;Parent=Thaps33270;rank=1 chr3 . exon 336483 336857 . - . ID=Thaps33270.1;Parent=Thaps33270;constitutive=1;rank=1 chr3 . repeat_region 340277 340307 . ? . description=dust chr3 ensembl protein_coding_gene 340251 341606 . - . ID=Thaps21633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX23];external_name=Thaps21633;logic_name=jgi_thaps3 chr3 ensembl transcript 340251 341606 . - . ID=Thaps21633;Parent=Thaps21633;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 340251 341606 . - 0 ID=Thaps21633;Parent=Thaps21633;rank=1 chr3 . exon 340251 341606 . - . ID=Thaps21633.1;Parent=Thaps21633;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 345827 346691 . + . ID=Thaps261678;biotype=protein_coding;description=Guanlylate cyclase [Source:UniProtKB/TrEMBL%3BAcc:B8BX25];external_name=Thaps261678;logic_name=jgi_thaps3 chr3 ensembl transcript 345827 346691 . + . ID=Thaps261678;Parent=Thaps261678;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 345827 346293 . + 0 ID=Thaps261678;Parent=Thaps261678;rank=1 chr3 . exon 345827 346293 . + . ID=Thaps261678.1;Parent=Thaps261678;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 346390 346691 . + 0 ID=Thaps261678;Parent=Thaps261678;rank=2 chr3 . exon 346390 346691 . + . ID=Thaps261678.2;Parent=Thaps261678;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 338700 339210 . - . ID=Thaps3183;biotype=protein_coding;description=Histone H3 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD6];external_name=H3-2;logic_name=jgi_thaps3 chr3 ensembl transcript 338700 339210 . - . ID=Thaps3183;Parent=Thaps3183;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 338700 338997 . - 0 ID=Thaps3183;Parent=Thaps3183;rank=2 chr3 . exon 338700 338997 . - . ID=Thaps3183.2;Parent=Thaps3183;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 339098 339210 . - 0 ID=Thaps3183;Parent=Thaps3183;rank=1 chr3 . exon 339098 339210 . - . ID=Thaps3183.1;Parent=Thaps3183;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 339536 339847 . + . ID=Thaps3184;biotype=protein_coding;description=Histone H4 [Source:UniProtKB/TrEMBL%3BAcc:B5YMD7];external_name=H4_2;logic_name=jgi_thaps3 chr3 ensembl transcript 339536 339847 . + . ID=Thaps3184;Parent=Thaps3184;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 339536 339847 . + 0 ID=Thaps3184;Parent=Thaps3184;rank=1 chr3 . exon 339536 339847 . + . ID=Thaps3184.1;Parent=Thaps3184;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 341813 342934 . + . ID=Thaps3186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX24];external_name=Thaps3186;logic_name=jgi_thaps3 chr3 ensembl transcript 341813 342934 . + . ID=Thaps3186;Parent=Thaps3186;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 341813 342934 . + 0 ID=Thaps3186;Parent=Thaps3186;rank=1 chr3 . exon 341813 342934 . + . ID=Thaps3186.1;Parent=Thaps3186;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 348490 348944 . - . ID=Thaps3189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX27];external_name=Thaps3189;logic_name=jgi_thaps3 chr3 ensembl transcript 348490 348944 . - . ID=Thaps3189;Parent=Thaps3189;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 348490 348944 . - 0 ID=Thaps3189;Parent=Thaps3189;rank=1 chr3 . exon 348490 348944 . - . ID=Thaps3189.1;Parent=Thaps3189;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 346821 348491 . - . ID=Thaps33044;biotype=protein_coding;description=Lysyl-tRNA synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BX26];external_name=Thaps33044;logic_name=jgi_thaps3 chr3 ensembl transcript 346821 348491 . - . ID=Thaps33044;Parent=Thaps33044;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 346821 347449 . - 0 ID=Thaps33044;Parent=Thaps33044;rank=3 chr3 . exon 346821 347449 . - . ID=Thaps33044.3;Parent=Thaps33044;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 347533 348100 . - 0 ID=Thaps33044;Parent=Thaps33044;rank=2 chr3 . exon 347533 348100 . - . ID=Thaps33044.2;Parent=Thaps33044;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 348180 348491 . - 0 ID=Thaps33044;Parent=Thaps33044;rank=1 chr3 . exon 348180 348491 . - . ID=Thaps33044.1;Parent=Thaps33044;constitutive=1;rank=1 chr3 . repeat_region 353432 353467 . ? . description=trf chr3 . repeat_region 357334 357354 . ? . description=trf chr3 ensembl protein_coding_gene 351555 353389 . - . ID=Thaps21636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX29];external_name=Thaps21636;logic_name=jgi_thaps3 chr3 ensembl transcript 351555 353389 . - . ID=Thaps21636;Parent=Thaps21636;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 351555 351722 . - 0 ID=Thaps21636;Parent=Thaps21636;rank=3 chr3 . exon 351555 351722 . - . ID=Thaps21636.3;Parent=Thaps21636;constitutive=1;rank=3 chr3 . CDS 351767 352377 . - 0 ID=Thaps21636;Parent=Thaps21636;rank=2 chr3 . exon 351767 352377 . - . ID=Thaps21636.2;Parent=Thaps21636;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 352402 353389 . - 0 ID=Thaps21636;Parent=Thaps21636;rank=1 chr3 . exon 352402 353389 . - . ID=Thaps21636.1;Parent=Thaps21636;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 349318 351114 . + . ID=Thaps3190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX28];external_name=Thaps3190;logic_name=jgi_thaps3 chr3 ensembl transcript 349318 351114 . + . ID=Thaps3190;Parent=Thaps3190;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 349318 351114 . + 0 ID=Thaps3190;Parent=Thaps3190;rank=1 chr3 . exon 349318 351114 . + . ID=Thaps3190.1;Parent=Thaps3190;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 353691 354771 . + . ID=Thaps3192;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX30];external_name=Thaps3192;logic_name=jgi_thaps3 chr3 ensembl transcript 353691 354771 . + . ID=Thaps3192;Parent=Thaps3192;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 353691 354254 . + 0 ID=Thaps3192;Parent=Thaps3192;rank=1 chr3 . exon 353691 354254 . + . ID=Thaps3192.1;Parent=Thaps3192;constitutive=1;rank=1 chr3 . CDS 354277 354771 . + 0 ID=Thaps3192;Parent=Thaps3192;rank=2 chr3 . exon 354277 354771 . + . ID=Thaps3192.2;Parent=Thaps3192;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 354898 358102 . - . ID=Thaps39799;biotype=protein_coding;description=Glycine decarboxylase p-protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX31];external_name=GDCP;logic_name=jgi_thaps3 chr3 ensembl transcript 354898 358102 . - . ID=Thaps39799;Parent=Thaps39799;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 354898 357791 . - 0 ID=Thaps39799;Parent=Thaps39799;rank=2 chr3 . exon 354898 357791 . - . ID=Thaps39799.2;Parent=Thaps39799;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 358075 358102 . - 0 ID=Thaps39799;Parent=Thaps39799;rank=1 chr3 . exon 358075 358102 . - . ID=Thaps39799.1;Parent=Thaps39799;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 359470 359515 . - . description=TE2c_TP chr3 ensembl protein_coding_gene 367401 368699 . - . ID=Thaps3196;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX33];external_name=Thaps3196;logic_name=jgi_thaps3 chr3 ensembl transcript 367401 368699 . - . ID=Thaps3196;Parent=Thaps3196;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 367401 368699 . - 0 ID=Thaps3196;Parent=Thaps3196;rank=1 chr3 . exon 367401 368699 . - . ID=Thaps3196.1;Parent=Thaps3196;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 359558 361261 . + . ID=Thaps39802;biotype=protein_coding;description=Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8BX32];external_name=Thaps39802;logic_name=jgi_thaps3 chr3 ensembl transcript 359558 361261 . + . ID=Thaps39802;Parent=Thaps39802;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 359558 360357 . + 0 ID=Thaps39802;Parent=Thaps39802;rank=1 chr3 . exon 359558 360357 . + . ID=Thaps39802.1;Parent=Thaps39802;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 360421 361079 . + 0 ID=Thaps39802;Parent=Thaps39802;rank=2 chr3 . exon 360421 361079 . + . ID=Thaps39802.2;Parent=Thaps39802;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 361134 361261 . + 0 ID=Thaps39802;Parent=Thaps39802;rank=3 chr3 . exon 361134 361261 . + . ID=Thaps39802.3;Parent=Thaps39802;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . repeat_region 370531 370556 . ? . description=trf chr3 . repeat_region 370531 370560 . ? . description=dust chr3 . repeat_region 371672 371749 . ? . description=trf chr3 . repeat_region 371672 371749 . ? . description=dust chr3 . repeat_region 375358 375366 . ? . description=dust chr3 ensembl protein_coding_gene 375534 377313 . + . ID=Thaps21640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX37];external_name=Thaps21640;logic_name=jgi_thaps3 chr3 ensembl transcript 375534 377313 . + . ID=Thaps21640;Parent=Thaps21640;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 375534 376469 . + 0 ID=Thaps21640;Parent=Thaps21640;rank=1 chr3 . exon 375534 376469 . + . ID=Thaps21640.1;Parent=Thaps21640;constitutive=1;rank=1 chr3 . CDS 376567 377313 . + 0 ID=Thaps21640;Parent=Thaps21640;rank=2 chr3 . exon 376567 377313 . + . ID=Thaps21640.2;Parent=Thaps21640;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 372132 375049 . - . ID=Thaps261684;biotype=protein_coding;description=Leucyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BX36];external_name=LEUS;logic_name=jgi_thaps3 chr3 ensembl transcript 372132 375049 . - . ID=Thaps261684;Parent=Thaps261684;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 372132 373298 . - 0 ID=Thaps261684;Parent=Thaps261684;rank=4 chr3 . exon 372132 373298 . - . ID=Thaps261684.4;Parent=Thaps261684;constitutive=1;rank=4 chr3 . CDS 373365 373988 . - 0 ID=Thaps261684;Parent=Thaps261684;rank=3 chr3 . exon 373365 373988 . - . ID=Thaps261684.3;Parent=Thaps261684;constitutive=1;rank=3 chr3 . CDS 374090 374736 . - 0 ID=Thaps261684;Parent=Thaps261684;rank=2 chr3 . exon 374090 374736 . - . ID=Thaps261684.2;Parent=Thaps261684;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 374764 375049 . - 0 ID=Thaps261684;Parent=Thaps261684;rank=1 chr3 . exon 374764 375049 . - . ID=Thaps261684.1;Parent=Thaps261684;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 377896 378840 . - . ID=Thaps27365;biotype=protein_coding;description=Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BX38];external_name=Thaps27365;logic_name=jgi_thaps3 chr3 ensembl transcript 377896 378840 . - . ID=Thaps27365;Parent=Thaps27365;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 377896 378840 . - 0 ID=Thaps27365;Parent=Thaps27365;rank=1 chr3 . exon 377896 378840 . - . ID=Thaps27365.1;Parent=Thaps27365;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 370385 371575 . - . ID=Thaps3197;biotype=protein_coding;description=Putative uncharacterized protein HSF29 [Source:UniProtKB/TrEMBL%3BAcc:B8BX35];external_name=HSF29;logic_name=jgi_thaps3 chr3 ensembl transcript 370385 371575 . - . ID=Thaps3197;Parent=Thaps3197;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 370385 371155 . - 0 ID=Thaps3197;Parent=Thaps3197;rank=2 chr3 . exon 370385 371155 . - . ID=Thaps3197.2;Parent=Thaps3197;constitutive=1;rank=2 chr3 . CDS 371252 371575 . - 0 ID=Thaps3197;Parent=Thaps3197;rank=1 chr3 . exon 371252 371575 . - . ID=Thaps3197.1;Parent=Thaps3197;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 369364 370292 . + . ID=Thaps32738;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX34];external_name=Thaps32738;logic_name=jgi_thaps3 chr3 ensembl transcript 369364 370292 . + . ID=Thaps32738;Parent=Thaps32738;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 369364 369865 . + 0 ID=Thaps32738;Parent=Thaps32738;rank=1 chr3 . exon 369364 369865 . + . ID=Thaps32738.1;Parent=Thaps32738;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 369958 370292 . + 0 ID=Thaps32738;Parent=Thaps32738;rank=2 chr3 . exon 369958 370292 . + . ID=Thaps32738.2;Parent=Thaps32738;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 384022 385393 . + . ID=Thaps261688;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX41];external_name=Thaps261688;logic_name=jgi_thaps3 chr3 ensembl transcript 384022 385393 . + . ID=Thaps261688;Parent=Thaps261688;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 384022 385393 . + 0 ID=Thaps261688;Parent=Thaps261688;rank=1 chr3 . exon 384022 385393 . + . ID=Thaps261688.1;Parent=Thaps261688;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 379522 382329 . + . ID=Thaps3201;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX39];external_name=Thaps3201;logic_name=jgi_thaps3 chr3 ensembl transcript 379522 382329 . + . ID=Thaps3201;Parent=Thaps3201;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 379522 382329 . + 0 ID=Thaps3201;Parent=Thaps3201;rank=1 chr3 . exon 379522 382329 . + . ID=Thaps3201.1;Parent=Thaps3201;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 382396 383659 . - . ID=Thaps3202;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX40];external_name=Thaps3202;logic_name=jgi_thaps3 chr3 ensembl transcript 382396 383659 . - . ID=Thaps3202;Parent=Thaps3202;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 382396 382751 . - 0 ID=Thaps3202;Parent=Thaps3202;rank=2 chr3 . exon 382396 382751 . - . ID=Thaps3202.2;Parent=Thaps3202;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 382771 383659 . - 0 ID=Thaps3202;Parent=Thaps3202;rank=1 chr3 . exon 382771 383659 . - . ID=Thaps3202.1;Parent=Thaps3202;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 386663 387607 . - . ID=Thaps3204;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX42];external_name=Thaps3204;logic_name=jgi_thaps3 chr3 ensembl transcript 386663 387607 . - . ID=Thaps3204;Parent=Thaps3204;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 386663 387607 . - 0 ID=Thaps3204;Parent=Thaps3204;rank=1 chr3 . exon 386663 387607 . - . ID=Thaps3204.1;Parent=Thaps3204;constitutive=1;rank=1 chr3 . repeat_region 392310 392318 . ? . description=dust chr3 ensembl protein_coding_gene 395743 398755 . + . ID=Thaps21645;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX46];external_name=Thaps21645;logic_name=jgi_thaps3 chr3 ensembl transcript 395743 398755 . + . ID=Thaps21645;Parent=Thaps21645;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 395743 396306 . + 0 ID=Thaps21645;Parent=Thaps21645;rank=1 chr3 . exon 395743 396306 . + . ID=Thaps21645.1;Parent=Thaps21645;constitutive=1;rank=1 chr3 . CDS 396422 398755 . + 0 ID=Thaps21645;Parent=Thaps21645;rank=2 chr3 . exon 396422 398755 . + . ID=Thaps21645.2;Parent=Thaps21645;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 388462 389153 . - . ID=Thaps261689;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX43];external_name=Thaps261689;logic_name=jgi_thaps3 chr3 ensembl transcript 388462 389153 . - . ID=Thaps261689;Parent=Thaps261689;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 388462 388598 . - 0 ID=Thaps261689;Parent=Thaps261689;rank=2 chr3 . exon 388462 388598 . - . ID=Thaps261689.2;Parent=Thaps261689;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 388817 389153 . - 0 ID=Thaps261689;Parent=Thaps261689;rank=1 chr3 . exon 388817 389153 . - . ID=Thaps261689.1;Parent=Thaps261689;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 393296 395411 . + . ID=Thaps261690;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BX45];external_name=Thaps261690;logic_name=jgi_thaps3 chr3 ensembl transcript 393296 395411 . + . ID=Thaps261690;Parent=Thaps261690;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 393296 393398 . + 0 ID=Thaps261690;Parent=Thaps261690;rank=1 chr3 . exon 393296 393398 . + . ID=Thaps261690.1;Parent=Thaps261690;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 393479 393845 . + 0 ID=Thaps261690;Parent=Thaps261690;rank=2 chr3 . exon 393479 393845 . + . ID=Thaps261690.2;Parent=Thaps261690;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 393921 394548 . + 0 ID=Thaps261690;Parent=Thaps261690;rank=3 chr3 . exon 393921 394548 . + . ID=Thaps261690.3;Parent=Thaps261690;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 394640 394759 . + 0 ID=Thaps261690;Parent=Thaps261690;rank=4 chr3 . exon 394640 394759 . + . ID=Thaps261690.4;Parent=Thaps261690;constitutive=1;rank=4 chr3 . CDS 394837 395411 . + 0 ID=Thaps261690;Parent=Thaps261690;rank=5 chr3 . exon 394837 395411 . + . ID=Thaps261690.5;Parent=Thaps261690;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 390291 392147 . - . ID=Thaps3206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX44];external_name=Thaps3206;logic_name=jgi_thaps3 chr3 ensembl transcript 390291 392147 . - . ID=Thaps3206;Parent=Thaps3206;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 390291 392147 . - 0 ID=Thaps3206;Parent=Thaps3206;rank=1 chr3 . exon 390291 392147 . - . ID=Thaps3206.1;Parent=Thaps3206;constitutive=1;rank=1 chr3 . repeat_region 402279 402309 . ? . description=trf chr3 ensembl protein_coding_gene 398948 399997 . - . ID=Thaps15464;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX47];external_name=Thaps15464;logic_name=jgi_thaps3 chr3 ensembl transcript 398948 399997 . - . ID=Thaps15464;Parent=Thaps15464;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 398948 399413 . - 0 ID=Thaps15464;Parent=Thaps15464;rank=2 chr3 . exon 398948 399413 . - . ID=Thaps15464.2;Parent=Thaps15464;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 399507 399997 . - 0 ID=Thaps15464;Parent=Thaps15464;rank=1 chr3 . exon 399507 399997 . - . ID=Thaps15464.1;Parent=Thaps15464;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 402322 403643 . + . ID=Thaps261692;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX48];external_name=Thaps261692;logic_name=jgi_thaps3 chr3 ensembl transcript 402322 403643 . + . ID=Thaps261692;Parent=Thaps261692;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 402322 402520 . + 0 ID=Thaps261692;Parent=Thaps261692;rank=1 chr3 . exon 402322 402520 . + . ID=Thaps261692.1;Parent=Thaps261692;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 402674 402916 . + 0 ID=Thaps261692;Parent=Thaps261692;rank=2 chr3 . exon 402674 402916 . + . ID=Thaps261692.2;Parent=Thaps261692;constitutive=1;rank=2 chr3 . CDS 403031 403643 . + 0 ID=Thaps261692;Parent=Thaps261692;rank=3 chr3 . exon 403031 403643 . + . ID=Thaps261692.3;Parent=Thaps261692;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 407185 408448 . - . ID=Thaps261694;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX51];external_name=Thaps261694;logic_name=jgi_thaps3 chr3 ensembl transcript 407185 408448 . - . ID=Thaps261694;Parent=Thaps261694;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 407185 407793 . - 0 ID=Thaps261694;Parent=Thaps261694;rank=4 chr3 . exon 407185 407793 . - . ID=Thaps261694.4;Parent=Thaps261694;constitutive=1;rank=4 chr3 . CDS 407875 408069 . - 0 ID=Thaps261694;Parent=Thaps261694;rank=3 chr3 . exon 407875 408069 . - . ID=Thaps261694.3;Parent=Thaps261694;constitutive=1;rank=3 chr3 . CDS 408115 408282 . - 0 ID=Thaps261694;Parent=Thaps261694;rank=2 chr3 . exon 408115 408282 . - . ID=Thaps261694.2;Parent=Thaps261694;constitutive=1;rank=2 chr3 . CDS 408376 408448 . - 0 ID=Thaps261694;Parent=Thaps261694;rank=1 chr3 ensembl protein_coding_gene 406172 406996 . + . ID=Thaps3212;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX50];external_name=Thaps3212;logic_name=jgi_thaps3 chr3 ensembl transcript 406172 406996 . + . ID=Thaps3212;Parent=Thaps3212;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 406172 406996 . + 0 ID=Thaps3212;Parent=Thaps3212;rank=1 chr3 . exon 406172 406996 . + . ID=Thaps3212.1;Parent=Thaps3212;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 404892 405134 . + . ID=Thaps32790;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX49];external_name=Thaps32790;logic_name=jgi_thaps3 chr3 ensembl transcript 404892 405134 . + . ID=Thaps32790;Parent=Thaps32790;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 404892 405134 . + 0 ID=Thaps32790;Parent=Thaps32790;rank=1 chr3 . exon 404892 405134 . + . ID=Thaps32790.1;Parent=Thaps32790;constitutive=1;rank=1 chr3 . repeat_region 413213 413220 . ? . description=dust chr3 . repeat_region 413563 413768 . + . description=Gypsy1ALTR_TP chr3 . repeat_region 413769 418441 . + . description=Gypsy1I_TP chr3 ensembl protein_coding_gene 409305 411164 . - . ID=Thaps21646;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX52];external_name=Thaps21646;logic_name=jgi_thaps3 chr3 ensembl transcript 409305 411164 . - . ID=Thaps21646;Parent=Thaps21646;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 409305 411164 . - 0 ID=Thaps21646;Parent=Thaps21646;rank=1 chr3 . exon 409305 411164 . - . ID=Thaps21646.1;Parent=Thaps21646;constitutive=1;rank=1 chr3 . exon 408376 408448 . - . ID=Thaps261694.1;Parent=Thaps261694;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl gene 416036 416836 . + . ID=Thaps261696;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 416036 416836 . + . ID=Thaps261696;Parent=Thaps261696;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 416036 416836 . + . ID=Thaps261696.1;Parent=Thaps261696;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 412024 413103 . + . ID=Thaps3215;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX53];external_name=Thaps3215;logic_name=jgi_thaps3 chr3 ensembl transcript 412024 413103 . + . ID=Thaps3215;Parent=Thaps3215;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 412024 413103 . + 0 ID=Thaps3215;Parent=Thaps3215;rank=1 chr3 . exon 412024 413103 . + . ID=Thaps3215.1;Parent=Thaps3215;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 418880 419836 . + . ID=Thaps21647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX54];external_name=Thaps21647;logic_name=jgi_thaps3 chr3 ensembl transcript 418880 419836 . + . ID=Thaps21647;Parent=Thaps21647;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 418880 419836 . + 0 ID=Thaps21647;Parent=Thaps21647;rank=1 chr3 . exon 418880 419836 . + . ID=Thaps21647.1;Parent=Thaps21647;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 427182 429738 . - . ID=Thaps21651;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX59];external_name=Thaps21651;logic_name=jgi_thaps3 chr3 ensembl transcript 427182 429738 . - . ID=Thaps21651;Parent=Thaps21651;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 427182 427283 . - 0 ID=Thaps21651;Parent=Thaps21651;rank=9 chr3 . exon 427182 427283 . - . ID=Thaps21651.9;Parent=Thaps21651;constitutive=1;rank=9 chr3 . CDS 427369 427536 . - 0 ID=Thaps21651;Parent=Thaps21651;rank=8 chr3 . exon 427369 427536 . - . ID=Thaps21651.8;Parent=Thaps21651;constitutive=1;rank=8 chr3 . CDS 427621 427644 . - 0 ID=Thaps21651;Parent=Thaps21651;rank=7 chr3 . exon 427621 427644 . - . ID=Thaps21651.7;Parent=Thaps21651;constitutive=1;rank=7 chr3 . CDS 427733 428381 . - 0 ID=Thaps21651;Parent=Thaps21651;rank=6 chr3 . exon 427733 428381 . - . ID=Thaps21651.6;Parent=Thaps21651;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 428462 428504 . - 0 ID=Thaps21651;Parent=Thaps21651;rank=5 chr3 . CDS 428615 428775 . - 0 ID=Thaps21651;Parent=Thaps21651;rank=4 chr3 . CDS 428852 429008 . - 0 ID=Thaps21651;Parent=Thaps21651;rank=3 chr3 . CDS 429092 429307 . - 0 ID=Thaps21651;Parent=Thaps21651;rank=2 chr3 . CDS 429438 429738 . - 0 ID=Thaps21651;Parent=Thaps21651;rank=1 chr3 ensembl protein_coding_gene 426311 426570 . + . ID=Thaps261702;biotype=protein_coding;description=Low molecular weight heat shock protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX58];external_name=Thaps261702;logic_name=jgi_thaps3 chr3 ensembl transcript 426311 426570 . + . ID=Thaps261702;Parent=Thaps261702;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 426311 426570 . + 0 ID=Thaps261702;Parent=Thaps261702;rank=1 chr3 . exon 426311 426570 . + . ID=Thaps261702.1;Parent=Thaps261702;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 419948 421204 . - . ID=Thaps268435;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX55];external_name=Thaps268435;logic_name=jgi_thaps3 chr3 ensembl transcript 419948 421204 . - . ID=Thaps268435;Parent=Thaps268435;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 419948 421204 . - 0 ID=Thaps268435;Parent=Thaps268435;rank=1 chr3 . exon 419948 421204 . - . ID=Thaps268435.1;Parent=Thaps268435;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 422571 423107 . + . ID=Thaps33075;biotype=protein_coding;description=N-acetyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BX56];external_name=Thaps33075;logic_name=jgi_thaps3 chr3 ensembl transcript 422571 423107 . + . ID=Thaps33075;Parent=Thaps33075;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 422571 422747 . + 0 ID=Thaps33075;Parent=Thaps33075;rank=1 chr3 . exon 422571 422747 . + . ID=Thaps33075.1;Parent=Thaps33075;constitutive=1;rank=1 chr3 . CDS 422799 423107 . + 0 ID=Thaps33075;Parent=Thaps33075;rank=2 chr3 . exon 422799 423107 . + . ID=Thaps33075.2;Parent=Thaps33075;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 423161 425455 . - . ID=Thaps33153;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX57];external_name=Thaps33153;logic_name=jgi_thaps3 chr3 ensembl transcript 423161 425455 . - . ID=Thaps33153;Parent=Thaps33153;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 423161 423350 . - 0 ID=Thaps33153;Parent=Thaps33153;rank=6 chr3 . exon 423161 423350 . - . ID=Thaps33153.6;Parent=Thaps33153;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 423447 423954 . - 0 ID=Thaps33153;Parent=Thaps33153;rank=5 chr3 . exon 423447 423954 . - . ID=Thaps33153.5;Parent=Thaps33153;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 423988 424181 . - 0 ID=Thaps33153;Parent=Thaps33153;rank=4 chr3 . exon 423988 424181 . - . ID=Thaps33153.4;Parent=Thaps33153;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 424218 424837 . - 0 ID=Thaps33153;Parent=Thaps33153;rank=3 chr3 . exon 424218 424837 . - . ID=Thaps33153.3;Parent=Thaps33153;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 424994 425233 . - 0 ID=Thaps33153;Parent=Thaps33153;rank=2 chr3 . exon 424994 425233 . - . ID=Thaps33153.2;Parent=Thaps33153;constitutive=1;rank=2 chr3 . CDS 425306 425455 . - 0 ID=Thaps33153;Parent=Thaps33153;rank=1 chr3 . exon 425306 425455 . - . ID=Thaps33153.1;Parent=Thaps33153;constitutive=1;rank=1 chr3 . repeat_region 430010 430206 . - . description=Gypsy1ALTR_TP chr3 . repeat_region 430207 432734 . - . description=Gypsy1I_TP chr3 . repeat_region 431510 431555 . ? . description=trf chr3 . repeat_region 432735 432930 . - . description=Gypsy1ALTR_TP chr3 . exon 428462 428504 . - . ID=Thaps21651.5;Parent=Thaps21651;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . exon 428615 428775 . - . ID=Thaps21651.4;Parent=Thaps21651;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . exon 428852 429008 . - . ID=Thaps21651.3;Parent=Thaps21651;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 429092 429307 . - . ID=Thaps21651.2;Parent=Thaps21651;constitutive=1;rank=2 chr3 . exon 429438 429738 . - . ID=Thaps21651.1;Parent=Thaps21651;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 437874 438659 . - . ID=Thaps21652;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX62];external_name=Thaps21652;logic_name=jgi_thaps3 chr3 ensembl transcript 437874 438659 . - . ID=Thaps21652;Parent=Thaps21652;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 437874 438659 . - 0 ID=Thaps21652;Parent=Thaps21652;rank=1 chr3 . exon 437874 438659 . - . ID=Thaps21652.1;Parent=Thaps21652;constitutive=1;rank=1 chr3 ensembl gene 431799 432737 . - . ID=Thaps261704;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 431799 432737 . - . ID=Thaps261704;Parent=Thaps261704;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 431799 432599 . - . ID=Thaps261704.2;Parent=Thaps261704;constitutive=1;rank=2 chr3 . exon 432630 432737 . - . ID=Thaps261704.1;Parent=Thaps261704;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 433876 435585 . + . ID=Thaps3222;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX60];external_name=Thaps3222;logic_name=jgi_thaps3 chr3 ensembl transcript 433876 435585 . + . ID=Thaps3222;Parent=Thaps3222;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 433876 434057 . + 0 ID=Thaps3222;Parent=Thaps3222;rank=1 chr3 . exon 433876 434057 . + . ID=Thaps3222.1;Parent=Thaps3222;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 434138 434321 . + 0 ID=Thaps3222;Parent=Thaps3222;rank=2 chr3 . exon 434138 434321 . + . ID=Thaps3222.2;Parent=Thaps3222;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 434423 434625 . + 0 ID=Thaps3222;Parent=Thaps3222;rank=3 chr3 . exon 434423 434625 . + . ID=Thaps3222.3;Parent=Thaps3222;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 434703 434908 . + 0 ID=Thaps3222;Parent=Thaps3222;rank=4 chr3 . exon 434703 434908 . + . ID=Thaps3222.4;Parent=Thaps3222;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 435080 435585 . + 0 ID=Thaps3222;Parent=Thaps3222;rank=5 chr3 . exon 435080 435585 . + . ID=Thaps3222.5;Parent=Thaps3222;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 435750 437101 . - . ID=Thaps3223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX61];external_name=Thaps3223;logic_name=jgi_thaps3 chr3 ensembl transcript 435750 437101 . - . ID=Thaps3223;Parent=Thaps3223;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 435750 436271 . - 0 ID=Thaps3223;Parent=Thaps3223;rank=2 chr3 . exon 435750 436271 . - . ID=Thaps3223.2;Parent=Thaps3223;constitutive=1;rank=2 chr3 . CDS 436355 437101 . - 0 ID=Thaps3223;Parent=Thaps3223;rank=1 chr3 . exon 436355 437101 . - . ID=Thaps3223.1;Parent=Thaps3223;constitutive=1;rank=1 chr3 . repeat_region 438937 438945 . ? . description=dust chr3 . repeat_region 439171 439185 . ? . description=dust chr3 . repeat_region 447590 447684 . ? . description=dust chr3 . repeat_region 448010 448063 . ? . description=dust chr3 ensembl protein_coding_gene 439277 443568 . + . ID=Thaps21653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX63];external_name=Thaps21653;logic_name=jgi_thaps3 chr3 ensembl transcript 439277 443568 . + . ID=Thaps21653;Parent=Thaps21653;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 439277 439998 . + 0 ID=Thaps21653;Parent=Thaps21653;rank=1 chr3 . exon 439277 439998 . + . ID=Thaps21653.1;Parent=Thaps21653;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 440090 442923 . + 0 ID=Thaps21653;Parent=Thaps21653;rank=2 chr3 . exon 440090 442923 . + . ID=Thaps21653.2;Parent=Thaps21653;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 443072 443568 . + 0 ID=Thaps21653;Parent=Thaps21653;rank=3 chr3 . exon 443072 443568 . + . ID=Thaps21653.3;Parent=Thaps21653;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 444136 446462 . + . ID=Thaps21654;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX64];external_name=Thaps21654;logic_name=jgi_thaps3 chr3 ensembl transcript 444136 446462 . + . ID=Thaps21654;Parent=Thaps21654;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 444136 445623 . + 0 ID=Thaps21654;Parent=Thaps21654;rank=1 chr3 . exon 444136 445623 . + . ID=Thaps21654.1;Parent=Thaps21654;constitutive=1;rank=1 chr3 . CDS 445719 446462 . + 0 ID=Thaps21654;Parent=Thaps21654;rank=2 chr3 . exon 445719 446462 . + . ID=Thaps21654.2;Parent=Thaps21654;constitutive=1;rank=2 chr3 . repeat_region 451720 451766 . ? . description=trf chr3 . repeat_region 452528 452569 . ? . description=trf chr3 ensembl protein_coding_gene 455528 458636 . - . ID=Thaps21655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX70];external_name=Thaps21655;logic_name=jgi_thaps3 chr3 ensembl transcript 455528 458636 . - . ID=Thaps21655;Parent=Thaps21655;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 455528 455843 . - 0 ID=Thaps21655;Parent=Thaps21655;rank=2 chr3 . exon 455528 455843 . - . ID=Thaps21655.2;Parent=Thaps21655;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 455923 458636 . - 0 ID=Thaps21655;Parent=Thaps21655;rank=1 chr3 . exon 455923 458636 . - . ID=Thaps21655.1;Parent=Thaps21655;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl gene 448310 448920 . + . ID=Thaps261705;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 448310 448920 . + . ID=Thaps261705;Parent=Thaps261705;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 448310 448359 . + . ID=Thaps261705.1;Parent=Thaps261705;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . exon 448459 448526 . + . ID=Thaps261705.2;Parent=Thaps261705;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 448612 448920 . + . ID=Thaps261705.3;Parent=Thaps261705;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 449611 451144 . + . ID=Thaps3228;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX66];external_name=Thaps3228;logic_name=jgi_thaps3 chr3 ensembl transcript 449611 451144 . + . ID=Thaps3228;Parent=Thaps3228;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 449611 450492 . + 0 ID=Thaps3228;Parent=Thaps3228;rank=1 chr3 . exon 449611 450492 . + . ID=Thaps3228.1;Parent=Thaps3228;constitutive=1;rank=1 chr3 . CDS 450519 450662 . + 0 ID=Thaps3228;Parent=Thaps3228;rank=2 chr3 . exon 450519 450662 . + . ID=Thaps3228.2;Parent=Thaps3228;constitutive=1;rank=2 chr3 . CDS 450701 451144 . + 0 ID=Thaps3228;Parent=Thaps3228;rank=3 chr3 . exon 450701 451144 . + . ID=Thaps3228.3;Parent=Thaps3228;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 452193 452582 . + . ID=Thaps3229;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX68];external_name=Thaps3229;logic_name=jgi_thaps3 chr3 ensembl transcript 452193 452582 . + . ID=Thaps3229;Parent=Thaps3229;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 452193 452582 . + 0 ID=Thaps3229;Parent=Thaps3229;rank=1 chr3 . exon 452193 452582 . + . ID=Thaps3229.1;Parent=Thaps3229;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 453313 454320 . - . ID=Thaps3230;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX69];external_name=Thaps3230;logic_name=jgi_thaps3 chr3 ensembl transcript 453313 454320 . - . ID=Thaps3230;Parent=Thaps3230;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 453313 454320 . - 0 ID=Thaps3230;Parent=Thaps3230;rank=1 chr3 . exon 453313 454320 . - . ID=Thaps3230.1;Parent=Thaps3230;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 451352 451954 . - . ID=Thaps32894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX67];external_name=Thaps32894;logic_name=jgi_thaps3 chr3 ensembl transcript 451352 451954 . - . ID=Thaps32894;Parent=Thaps32894;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 451352 451597 . - 0 ID=Thaps32894;Parent=Thaps32894;rank=2 chr3 . exon 451352 451597 . - . ID=Thaps32894.2;Parent=Thaps32894;constitutive=1;rank=2 chr3 . CDS 451781 451954 . - 0 ID=Thaps32894;Parent=Thaps32894;rank=1 chr3 . exon 451781 451954 . - . ID=Thaps32894.1;Parent=Thaps32894;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 449158 449334 . + . ID=Thaps32971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX65];external_name=Thaps32971;logic_name=jgi_thaps3 chr3 ensembl transcript 449158 449334 . + . ID=Thaps32971;Parent=Thaps32971;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 449158 449334 . + 0 ID=Thaps32971;Parent=Thaps32971;rank=1 chr3 . exon 449158 449334 . + . ID=Thaps32971.1;Parent=Thaps32971;constitutive=1;rank=1 chr3 . repeat_region 466849 466859 . ? . description=dust chr3 ensembl protein_coding_gene 460196 460879 . - . ID=Thaps17140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX71];external_name=Thaps17140;logic_name=jgi_thaps3 chr3 ensembl transcript 460196 460879 . - . ID=Thaps17140;Parent=Thaps17140;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 460196 460879 . - 0 ID=Thaps17140;Parent=Thaps17140;rank=1 chr3 . exon 460196 460879 . - . ID=Thaps17140.1;Parent=Thaps17140;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 463716 465995 . + . ID=Thaps21656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX73];external_name=Thaps21656;logic_name=jgi_thaps3 chr3 ensembl transcript 463716 465995 . + . ID=Thaps21656;Parent=Thaps21656;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 463716 465995 . + 0 ID=Thaps21656;Parent=Thaps21656;rank=1 chr3 . exon 463716 465995 . + . ID=Thaps21656.1;Parent=Thaps21656;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 461713 462899 . - . ID=Thaps3233;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX72];external_name=Thaps3233;logic_name=jgi_thaps3 chr3 ensembl transcript 461713 462899 . - . ID=Thaps3233;Parent=Thaps3233;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 461713 462172 . - 0 ID=Thaps3233;Parent=Thaps3233;rank=2 chr3 . exon 461713 462172 . - . ID=Thaps3233.2;Parent=Thaps3233;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 462304 462899 . - 0 ID=Thaps3233;Parent=Thaps3233;rank=1 chr3 . exon 462304 462899 . - . ID=Thaps3233.1;Parent=Thaps3233;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 466982 471210 . + . ID=Thaps3235;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX74];external_name=Thaps3235;logic_name=jgi_thaps3 chr3 ensembl transcript 466982 471210 . + . ID=Thaps3235;Parent=Thaps3235;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 466982 467677 . + 0 ID=Thaps3235;Parent=Thaps3235;rank=1 chr3 . exon 466982 467677 . + . ID=Thaps3235.1;Parent=Thaps3235;constitutive=1;rank=1 chr3 . CDS 467763 467912 . + 0 ID=Thaps3235;Parent=Thaps3235;rank=2 chr3 . exon 467763 467912 . + . ID=Thaps3235.2;Parent=Thaps3235;constitutive=1;rank=2 chr3 . CDS 467998 468561 . + 0 ID=Thaps3235;Parent=Thaps3235;rank=3 chr3 . exon 467998 468561 . + . ID=Thaps3235.3;Parent=Thaps3235;constitutive=1;rank=3 chr3 . CDS 468648 468759 . + 0 ID=Thaps3235;Parent=Thaps3235;rank=4 chr3 . CDS 468836 469632 . + 0 ID=Thaps3235;Parent=Thaps3235;rank=5 chr3 . CDS 469709 470165 . + 0 ID=Thaps3235;Parent=Thaps3235;rank=6 chr3 . CDS 470246 471210 . + 0 ID=Thaps3235;Parent=Thaps3235;rank=7 chr3 ensembl protein_coding_gene 475355 478225 . + . ID=Thaps261710;biotype=protein_coding;description=Oliosaccharyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BX76];external_name=STT3B;logic_name=jgi_thaps3 chr3 ensembl transcript 475355 478225 . + . ID=Thaps261710;Parent=Thaps261710;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 475355 475509 . + 0 ID=Thaps261710;Parent=Thaps261710;rank=1 chr3 . exon 475355 475509 . + . ID=Thaps261710.1;Parent=Thaps261710;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 475590 475671 . + 0 ID=Thaps261710;Parent=Thaps261710;rank=2 chr3 . exon 475590 475671 . + . ID=Thaps261710.2;Parent=Thaps261710;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 475825 475895 . + 0 ID=Thaps261710;Parent=Thaps261710;rank=3 chr3 . exon 475825 475895 . + . ID=Thaps261710.3;Parent=Thaps261710;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 476052 476236 . + 0 ID=Thaps261710;Parent=Thaps261710;rank=4 chr3 . exon 476052 476236 . + . ID=Thaps261710.4;Parent=Thaps261710;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 476324 477073 . + 0 ID=Thaps261710;Parent=Thaps261710;rank=5 chr3 . exon 476324 477073 . + . ID=Thaps261710.5;Parent=Thaps261710;constitutive=1;rank=5 chr3 . CDS 477158 477762 . + 0 ID=Thaps261710;Parent=Thaps261710;rank=6 chr3 . exon 477158 477762 . + . ID=Thaps261710.6;Parent=Thaps261710;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 477834 477964 . + 0 ID=Thaps261710;Parent=Thaps261710;rank=7 chr3 . exon 477834 477964 . + . ID=Thaps261710.7;Parent=Thaps261710;constitutive=1;ensembl_end_phase=2;rank=7 chr3 . CDS 478030 478225 . + 0 ID=Thaps261710;Parent=Thaps261710;rank=8 chr3 . exon 478030 478225 . + . ID=Thaps261710.8;Parent=Thaps261710;constitutive=1;ensembl_end_phase=1;rank=8 chr3 . exon 468648 468759 . + . ID=Thaps3235.4;Parent=Thaps3235;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . exon 468836 469632 . + . ID=Thaps3235.5;Parent=Thaps3235;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . exon 469709 470165 . + . ID=Thaps3235.6;Parent=Thaps3235;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . exon 470246 471210 . + . ID=Thaps3235.7;Parent=Thaps3235;constitutive=1;ensembl_end_phase=2;rank=7 chr3 ensembl protein_coding_gene 472862 473470 . - . ID=Thaps32723;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX75];external_name=Thaps32723;logic_name=jgi_thaps3 chr3 ensembl transcript 472862 473470 . - . ID=Thaps32723;Parent=Thaps32723;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 472862 473119 . - 0 ID=Thaps32723;Parent=Thaps32723;rank=2 chr3 . exon 472862 473119 . - . ID=Thaps32723.2;Parent=Thaps32723;constitutive=1;rank=2 chr3 . CDS 473186 473470 . - 0 ID=Thaps32723;Parent=Thaps32723;rank=1 chr3 . exon 473186 473470 . - . ID=Thaps32723.1;Parent=Thaps32723;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 483685 485343 . - . ID=Thaps21659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX79];external_name=Thaps21659;logic_name=jgi_thaps3 chr3 ensembl transcript 483685 485343 . - . ID=Thaps21659;Parent=Thaps21659;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 483685 485343 . - 0 ID=Thaps21659;Parent=Thaps21659;rank=1 chr3 . exon 483685 485343 . - . ID=Thaps21659.1;Parent=Thaps21659;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 479329 480124 . - . ID=Thaps3238;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX77];external_name=Thaps3238;logic_name=jgi_thaps3 chr3 ensembl transcript 479329 480124 . - . ID=Thaps3238;Parent=Thaps3238;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 479329 479745 . - 0 ID=Thaps3238;Parent=Thaps3238;rank=2 chr3 . exon 479329 479745 . - . ID=Thaps3238.2;Parent=Thaps3238;constitutive=1;rank=2 chr3 . CDS 479831 480124 . - 0 ID=Thaps3238;Parent=Thaps3238;rank=1 chr3 . exon 479831 480124 . - . ID=Thaps3238.1;Parent=Thaps3238;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 486886 488569 . + . ID=Thaps3241;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX80];external_name=Thaps3241;logic_name=jgi_thaps3 chr3 ensembl transcript 486886 488569 . + . ID=Thaps3241;Parent=Thaps3241;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 486886 486970 . + 0 ID=Thaps3241;Parent=Thaps3241;rank=1 chr3 . exon 486886 486970 . + . ID=Thaps3241.1;Parent=Thaps3241;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 487095 488569 . + 0 ID=Thaps3241;Parent=Thaps3241;rank=2 chr3 . exon 487095 488569 . + . ID=Thaps3241.2;Parent=Thaps3241;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 481196 482703 . + . ID=Thaps39812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX78];external_name=Thaps39812;logic_name=jgi_thaps3 chr3 ensembl transcript 481196 482703 . + . ID=Thaps39812;Parent=Thaps39812;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 481196 481908 . + 0 ID=Thaps39812;Parent=Thaps39812;rank=1 chr3 . exon 481196 481908 . + . ID=Thaps39812.1;Parent=Thaps39812;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 482004 482283 . + 0 ID=Thaps39812;Parent=Thaps39812;rank=2 chr3 . exon 482004 482283 . + . ID=Thaps39812.2;Parent=Thaps39812;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 482509 482703 . + 0 ID=Thaps39812;Parent=Thaps39812;rank=3 chr3 . exon 482509 482703 . + . ID=Thaps39812.3;Parent=Thaps39812;constitutive=1;rank=3 chr3 . repeat_region 489446 489480 . ? . description=trf chr3 . repeat_region 491366 491391 . ? . description=trf chr3 . repeat_region 496150 496240 . ? . description=trf chr3 . repeat_region 496945 496979 . - . description=Harbinger2N_TP chr3 ensembl protein_coding_gene 494292 495771 . + . ID=Thaps21661;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX84];external_name=Thaps21661;logic_name=jgi_thaps3 chr3 ensembl transcript 494292 495771 . + . ID=Thaps21661;Parent=Thaps21661;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 494292 495118 . + 0 ID=Thaps21661;Parent=Thaps21661;rank=1 chr3 . exon 494292 495118 . + . ID=Thaps21661.1;Parent=Thaps21661;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 495222 495771 . + 0 ID=Thaps21661;Parent=Thaps21661;rank=2 chr3 . exon 495222 495771 . + . ID=Thaps21661.2;Parent=Thaps21661;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 497134 497510 . - . ID=Thaps261711;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX85];external_name=Thaps261711;logic_name=jgi_thaps3 chr3 ensembl transcript 497134 497510 . - . ID=Thaps261711;Parent=Thaps261711;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 497134 497510 . - 0 ID=Thaps261711;Parent=Thaps261711;rank=1 chr3 . exon 497134 497510 . - . ID=Thaps261711.1;Parent=Thaps261711;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 489251 491257 . + . ID=Thaps3242;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX81];external_name=Thaps3242;logic_name=jgi_thaps3 chr3 ensembl transcript 489251 491257 . + . ID=Thaps3242;Parent=Thaps3242;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 489251 491257 . + 0 ID=Thaps3242;Parent=Thaps3242;rank=1 chr3 . exon 489251 491257 . + . ID=Thaps3242.1;Parent=Thaps3242;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 491485 492306 . - . ID=Thaps3243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX82];external_name=Thaps3243;logic_name=jgi_thaps3 chr3 ensembl transcript 491485 492306 . - . ID=Thaps3243;Parent=Thaps3243;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 491485 492306 . - 0 ID=Thaps3243;Parent=Thaps3243;rank=1 chr3 . exon 491485 492306 . - . ID=Thaps3243.1;Parent=Thaps3243;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 493232 494043 . - . ID=Thaps3244;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX83];external_name=Thaps3244;logic_name=jgi_thaps3 chr3 ensembl transcript 493232 494043 . - . ID=Thaps3244;Parent=Thaps3244;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 493232 493347 . - 0 ID=Thaps3244;Parent=Thaps3244;rank=2 chr3 . exon 493232 493347 . - . ID=Thaps3244.2;Parent=Thaps3244;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 493458 494043 . - 0 ID=Thaps3244;Parent=Thaps3244;rank=1 chr3 . exon 493458 494043 . - . ID=Thaps3244.1;Parent=Thaps3244;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 507319 507326 . ? . description=dust chr3 ensembl protein_coding_gene 500834 503461 . + . ID=Thaps21663;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX87];external_name=Thaps21663;logic_name=jgi_thaps3 chr3 ensembl transcript 500834 503461 . + . ID=Thaps21663;Parent=Thaps21663;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 500834 503461 . + 0 ID=Thaps21663;Parent=Thaps21663;rank=1 chr3 . exon 500834 503461 . + . ID=Thaps21663.1;Parent=Thaps21663;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 505566 506984 . - . ID=Thaps21664;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX88];external_name=Thaps21664;logic_name=jgi_thaps3 chr3 ensembl transcript 505566 506984 . - . ID=Thaps21664;Parent=Thaps21664;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 505566 506984 . - 0 ID=Thaps21664;Parent=Thaps21664;rank=1 chr3 . exon 505566 506984 . - . ID=Thaps21664.1;Parent=Thaps21664;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 507580 508731 . + . ID=Thaps21665;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX89];external_name=Thaps21665;logic_name=jgi_thaps3 chr3 ensembl transcript 507580 508731 . + . ID=Thaps21665;Parent=Thaps21665;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 507580 508731 . + 0 ID=Thaps21665;Parent=Thaps21665;rank=1 chr3 . exon 507580 508731 . + . ID=Thaps21665.1;Parent=Thaps21665;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 498808 499629 . - . ID=Thaps32706;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX86];external_name=Thaps32706;logic_name=jgi_thaps3 chr3 ensembl transcript 498808 499629 . - . ID=Thaps32706;Parent=Thaps32706;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 498808 499629 . - 0 ID=Thaps32706;Parent=Thaps32706;rank=1 chr3 . exon 498808 499629 . - . ID=Thaps32706.1;Parent=Thaps32706;constitutive=1;rank=1 chr3 . repeat_region 509132 509239 . ? . description=trf chr3 . repeat_region 515308 515343 . ? . description=trf chr3 ensembl protein_coding_gene 512149 514167 . + . ID=Thaps21666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX91];external_name=Thaps21666;logic_name=jgi_thaps3 chr3 ensembl transcript 512149 514167 . + . ID=Thaps21666;Parent=Thaps21666;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 512149 512794 . + 0 ID=Thaps21666;Parent=Thaps21666;rank=1 chr3 . exon 512149 512794 . + . ID=Thaps21666.1;Parent=Thaps21666;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 512910 513293 . + 0 ID=Thaps21666;Parent=Thaps21666;rank=2 chr3 . exon 512910 513293 . + . ID=Thaps21666.2;Parent=Thaps21666;constitutive=1;rank=2 chr3 . CDS 513377 514167 . + 0 ID=Thaps21666;Parent=Thaps21666;rank=3 chr3 . exon 513377 514167 . + . ID=Thaps21666.3;Parent=Thaps21666;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 509465 510616 . + . ID=Thaps3250;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX90];external_name=Thaps3250;logic_name=jgi_thaps3 chr3 ensembl transcript 509465 510616 . + . ID=Thaps3250;Parent=Thaps3250;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 509465 510616 . + 0 ID=Thaps3250;Parent=Thaps3250;rank=1 chr3 . exon 509465 510616 . + . ID=Thaps3250.1;Parent=Thaps3250;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 514857 515462 . - . ID=Thaps33018;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein 6 [Source:UniProtKB/TrEMBL%3BAcc:B8BX92];external_name=LHCF6;logic_name=jgi_thaps3 chr3 ensembl transcript 514857 515462 . - . ID=Thaps33018;Parent=Thaps33018;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 514857 515462 . - 0 ID=Thaps33018;Parent=Thaps33018;rank=1 chr3 . exon 514857 515462 . - . ID=Thaps33018.1;Parent=Thaps33018;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 515799 518488 . + . ID=Thaps39813;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c light-harvesting protein%2C major type [Source:UniProtKB/TrEMBL%3BAcc:B8BX93];external_name=LHCF7;logic_name=jgi_thaps3 chr3 ensembl transcript 515799 518488 . + . ID=Thaps39813;Parent=Thaps39813;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 515799 515909 . + 0 ID=Thaps39813;Parent=Thaps39813;rank=1 chr3 . exon 515799 515909 . + . ID=Thaps39813.1;Parent=Thaps39813;constitutive=1;rank=1 chr3 . CDS 515994 516035 . + 0 ID=Thaps39813;Parent=Thaps39813;rank=2 chr3 . exon 515994 516035 . + . ID=Thaps39813.2;Parent=Thaps39813;constitutive=1;rank=2 chr3 . CDS 517864 517912 . + 0 ID=Thaps39813;Parent=Thaps39813;rank=3 chr3 . exon 517864 517912 . + . ID=Thaps39813.3;Parent=Thaps39813;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 518007 518345 . + 0 ID=Thaps39813;Parent=Thaps39813;rank=4 chr3 . CDS 518445 518488 . + 0 ID=Thaps39813;Parent=Thaps39813;rank=5 chr3 ensembl protein_coding_gene 525785 526852 . - . ID=Thaps21668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX98];external_name=Thaps21668;logic_name=jgi_thaps3 chr3 ensembl transcript 525785 526852 . - . ID=Thaps21668;Parent=Thaps21668;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 525785 526255 . - 0 ID=Thaps21668;Parent=Thaps21668;rank=2 chr3 . exon 525785 526255 . - . ID=Thaps21668.2;Parent=Thaps21668;constitutive=1;rank=2 chr3 . CDS 526361 526852 . - 0 ID=Thaps21668;Parent=Thaps21668;rank=1 chr3 . exon 526361 526852 . - . ID=Thaps21668.1;Parent=Thaps21668;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 519302 520009 . + . ID=Thaps3255;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX94];external_name=Thaps3255;logic_name=jgi_thaps3 chr3 ensembl transcript 519302 520009 . + . ID=Thaps3255;Parent=Thaps3255;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 519302 520009 . + 0 ID=Thaps3255;Parent=Thaps3255;rank=1 chr3 . exon 519302 520009 . + . ID=Thaps3255.1;Parent=Thaps3255;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 520193 520634 . - . ID=Thaps3256;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX95];external_name=Thaps3256;logic_name=jgi_thaps3 chr3 ensembl transcript 520193 520634 . - . ID=Thaps3256;Parent=Thaps3256;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 520193 520308 . - 0 ID=Thaps3256;Parent=Thaps3256;rank=2 chr3 . exon 520193 520308 . - . ID=Thaps3256.2;Parent=Thaps3256;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 520382 520634 . - 0 ID=Thaps3256;Parent=Thaps3256;rank=1 chr3 . exon 520382 520634 . - . ID=Thaps3256.1;Parent=Thaps3256;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 520956 523758 . - . ID=Thaps3257;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX96];external_name=Thaps3257;logic_name=jgi_thaps3 chr3 ensembl transcript 520956 523758 . - . ID=Thaps3257;Parent=Thaps3257;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 520956 521266 . - 0 ID=Thaps3257;Parent=Thaps3257;rank=5 chr3 . exon 520956 521266 . - . ID=Thaps3257.5;Parent=Thaps3257;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 521353 521899 . - 0 ID=Thaps3257;Parent=Thaps3257;rank=4 chr3 . exon 521353 521899 . - . ID=Thaps3257.4;Parent=Thaps3257;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 521965 522363 . - 0 ID=Thaps3257;Parent=Thaps3257;rank=3 chr3 . exon 521965 522363 . - . ID=Thaps3257.3;Parent=Thaps3257;constitutive=1;rank=3 chr3 . CDS 522466 522900 . - 0 ID=Thaps3257;Parent=Thaps3257;rank=2 chr3 . exon 522466 522900 . - . ID=Thaps3257.2;Parent=Thaps3257;constitutive=1;rank=2 chr3 . CDS 523105 523758 . - 0 ID=Thaps3257;Parent=Thaps3257;rank=1 chr3 . exon 523105 523758 . - . ID=Thaps3257.1;Parent=Thaps3257;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 524202 525196 . + . ID=Thaps3258;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX97];external_name=Thaps3258;logic_name=jgi_thaps3 chr3 ensembl transcript 524202 525196 . + . ID=Thaps3258;Parent=Thaps3258;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 524202 524264 . + 0 ID=Thaps3258;Parent=Thaps3258;rank=1 chr3 . exon 524202 524264 . + . ID=Thaps3258.1;Parent=Thaps3258;constitutive=1;rank=1 chr3 . CDS 524735 525196 . + 0 ID=Thaps3258;Parent=Thaps3258;rank=2 chr3 . exon 524735 525196 . + . ID=Thaps3258.2;Parent=Thaps3258;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 527180 528598 . - . ID=Thaps3260;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BX99];external_name=Thaps3260;logic_name=jgi_thaps3 chr3 ensembl transcript 527180 528598 . - . ID=Thaps3260;Parent=Thaps3260;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 527180 528598 . - 0 ID=Thaps3260;Parent=Thaps3260;rank=1 chr3 . exon 527180 528598 . - . ID=Thaps3260.1;Parent=Thaps3260;constitutive=1;rank=1 chr3 . exon 518007 518345 . + . ID=Thaps39813.4;Parent=Thaps39813;constitutive=1;rank=4 chr3 . exon 518445 518488 . + . ID=Thaps39813.5;Parent=Thaps39813;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . repeat_region 529230 529272 . ? . description=trf chr3 ensembl protein_coding_gene 532653 533267 . - . ID=Thaps21669;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXA2];external_name=Thaps21669;logic_name=jgi_thaps3 chr3 ensembl transcript 532653 533267 . - . ID=Thaps21669;Parent=Thaps21669;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 532653 533267 . - 0 ID=Thaps21669;Parent=Thaps21669;rank=1 chr3 . exon 532653 533267 . - . ID=Thaps21669.1;Parent=Thaps21669;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 529228 529938 . + . ID=Thaps3261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXA0];external_name=Thaps3261;logic_name=jgi_thaps3 chr3 ensembl transcript 529228 529938 . + . ID=Thaps3261;Parent=Thaps3261;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 529228 529938 . + 0 ID=Thaps3261;Parent=Thaps3261;rank=1 chr3 . exon 529228 529938 . + . ID=Thaps3261.1;Parent=Thaps3261;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 533494 534432 . + . ID=Thaps3264;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXA3];external_name=Thaps3264;logic_name=jgi_thaps3 chr3 ensembl transcript 533494 534432 . + . ID=Thaps3264;Parent=Thaps3264;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 533494 534432 . + 0 ID=Thaps3264;Parent=Thaps3264;rank=1 chr3 . exon 533494 534432 . + . ID=Thaps3264.1;Parent=Thaps3264;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 534489 536091 . - . ID=Thaps3265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXA4];external_name=Thaps3265;logic_name=jgi_thaps3 chr3 ensembl transcript 534489 536091 . - . ID=Thaps3265;Parent=Thaps3265;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 534489 535458 . - 0 ID=Thaps3265;Parent=Thaps3265;rank=2 chr3 . exon 534489 535458 . - . ID=Thaps3265.2;Parent=Thaps3265;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 535787 536091 . - 0 ID=Thaps3265;Parent=Thaps3265;rank=1 chr3 . exon 535787 536091 . - . ID=Thaps3265.1;Parent=Thaps3265;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 536419 538570 . + . ID=Thaps3266;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXA5];external_name=Thaps3266;logic_name=jgi_thaps3 chr3 ensembl transcript 536419 538570 . + . ID=Thaps3266;Parent=Thaps3266;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 536419 536728 . + 0 ID=Thaps3266;Parent=Thaps3266;rank=1 chr3 . exon 536419 536728 . + . ID=Thaps3266.1;Parent=Thaps3266;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 536851 537122 . + 0 ID=Thaps3266;Parent=Thaps3266;rank=2 chr3 . exon 536851 537122 . + . ID=Thaps3266.2;Parent=Thaps3266;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 537229 537869 . + 0 ID=Thaps3266;Parent=Thaps3266;rank=3 chr3 . exon 537229 537869 . + . ID=Thaps3266.3;Parent=Thaps3266;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 537952 538073 . + 0 ID=Thaps3266;Parent=Thaps3266;rank=4 chr3 . CDS 538110 538570 . + 0 ID=Thaps3266;Parent=Thaps3266;rank=5 chr3 ensembl protein_coding_gene 531390 532328 . + . ID=Thaps32860;biotype=protein_coding;description=Enoyl-reductase [NADH] [Source:UniProtKB/TrEMBL%3BAcc:B8BXA1];external_name=EAR1;logic_name=jgi_thaps3 chr3 ensembl transcript 531390 532328 . + . ID=Thaps32860;Parent=Thaps32860;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 531390 532328 . + 0 ID=Thaps32860;Parent=Thaps32860;rank=1 chr3 . exon 531390 532328 . + . ID=Thaps32860.1;Parent=Thaps32860;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 540536 542408 . - . ID=Thaps13308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXA7];external_name=Thaps13308;logic_name=jgi_thaps3 chr3 ensembl transcript 540536 542408 . - . ID=Thaps13308;Parent=Thaps13308;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 540536 541224 . - 0 ID=Thaps13308;Parent=Thaps13308;rank=3 chr3 . exon 540536 541224 . - . ID=Thaps13308.3;Parent=Thaps13308;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 541294 541942 . - 0 ID=Thaps13308;Parent=Thaps13308;rank=2 chr3 . exon 541294 541942 . - . ID=Thaps13308.2;Parent=Thaps13308;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 542070 542408 . - 0 ID=Thaps13308;Parent=Thaps13308;rank=1 chr3 . exon 542070 542408 . - . ID=Thaps13308.1;Parent=Thaps13308;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 545645 546745 . + . ID=Thaps14923;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXB0];external_name=Thaps14923;logic_name=jgi_thaps3 chr3 ensembl transcript 545645 546745 . + . ID=Thaps14923;Parent=Thaps14923;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 545645 546745 . + 0 ID=Thaps14923;Parent=Thaps14923;rank=1 chr3 . exon 545645 546745 . + . ID=Thaps14923.1;Parent=Thaps14923;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 542949 544343 . + . ID=Thaps261716;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXA8];external_name=Thaps261716;logic_name=jgi_thaps3 chr3 ensembl transcript 542949 544343 . + . ID=Thaps261716;Parent=Thaps261716;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 542949 544343 . + 0 ID=Thaps261716;Parent=Thaps261716;rank=1 chr3 . exon 542949 544343 . + . ID=Thaps261716.1;Parent=Thaps261716;constitutive=1;rank=1 chr3 . exon 537952 538073 . + . ID=Thaps3266.4;Parent=Thaps3266;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . exon 538110 538570 . + . ID=Thaps3266.5;Parent=Thaps3266;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 539702 540022 . - . ID=Thaps3267;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXA6];external_name=Thaps3267;logic_name=jgi_thaps3 chr3 ensembl transcript 539702 540022 . - . ID=Thaps3267;Parent=Thaps3267;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 539702 540022 . - 0 ID=Thaps3267;Parent=Thaps3267;rank=1 chr3 . exon 539702 540022 . - . ID=Thaps3267.1;Parent=Thaps3267;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 544396 545079 . - . ID=Thaps3270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXA9];external_name=Thaps3270;logic_name=jgi_thaps3 chr3 ensembl transcript 544396 545079 . - . ID=Thaps3270;Parent=Thaps3270;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 544396 545079 . - 0 ID=Thaps3270;Parent=Thaps3270;rank=1 chr3 . exon 544396 545079 . - . ID=Thaps3270.1;Parent=Thaps3270;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 546863 547497 . - . ID=Thaps32776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXB1];external_name=Thaps32776;logic_name=jgi_thaps3 chr3 ensembl transcript 546863 547497 . - . ID=Thaps32776;Parent=Thaps32776;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 546863 546952 . - 0 ID=Thaps32776;Parent=Thaps32776;rank=3 chr3 . exon 546863 546952 . - . ID=Thaps32776.3;Parent=Thaps32776;constitutive=1;rank=3 chr3 . CDS 547042 547181 . - 0 ID=Thaps32776;Parent=Thaps32776;rank=2 chr3 . exon 547042 547181 . - . ID=Thaps32776.2;Parent=Thaps32776;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 547290 547497 . - 0 ID=Thaps32776;Parent=Thaps32776;rank=1 chr3 . exon 547290 547497 . - . ID=Thaps32776.1;Parent=Thaps32776;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 550696 551284 . - . ID=Thaps261719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXB2];external_name=Thaps261719;logic_name=jgi_thaps3 chr3 ensembl transcript 550696 551284 . - . ID=Thaps261719;Parent=Thaps261719;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 550696 550843 . - 0 ID=Thaps261719;Parent=Thaps261719;rank=3 chr3 . exon 550696 550843 . - . ID=Thaps261719.3;Parent=Thaps261719;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 550904 551115 . - 0 ID=Thaps261719;Parent=Thaps261719;rank=2 chr3 . exon 550904 551115 . - . ID=Thaps261719.2;Parent=Thaps261719;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 551152 551284 . - 0 ID=Thaps261719;Parent=Thaps261719;rank=1 chr3 . exon 551152 551284 . - . ID=Thaps261719.1;Parent=Thaps261719;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 553142 555208 . + . ID=Thaps27377;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXB3];external_name=Thaps27377;logic_name=jgi_thaps3 chr3 ensembl transcript 553142 555208 . + . ID=Thaps27377;Parent=Thaps27377;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 553142 553983 . + 0 ID=Thaps27377;Parent=Thaps27377;rank=1 chr3 . exon 553142 553983 . + . ID=Thaps27377.1;Parent=Thaps27377;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 554062 555208 . + 0 ID=Thaps27377;Parent=Thaps27377;rank=2 chr3 . exon 554062 555208 . + . ID=Thaps27377.2;Parent=Thaps27377;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 556382 557847 . - . ID=Thaps3275;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXB5];external_name=Thaps3275;logic_name=jgi_thaps3 chr3 ensembl transcript 556382 557847 . - . ID=Thaps3275;Parent=Thaps3275;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 556382 556984 . - 0 ID=Thaps3275;Parent=Thaps3275;rank=3 chr3 . exon 556382 556984 . - . ID=Thaps3275.3;Parent=Thaps3275;constitutive=1;rank=3 chr3 . CDS 557064 557458 . - 0 ID=Thaps3275;Parent=Thaps3275;rank=2 chr3 . exon 557064 557458 . - . ID=Thaps3275.2;Parent=Thaps3275;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 557565 557847 . - 0 ID=Thaps3275;Parent=Thaps3275;rank=1 chr3 . exon 557565 557847 . - . ID=Thaps3275.1;Parent=Thaps3275;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 555486 556331 . + . ID=Thaps32944;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXB4];external_name=Thaps32944;logic_name=jgi_thaps3 chr3 ensembl transcript 555486 556331 . + . ID=Thaps32944;Parent=Thaps32944;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 555486 555630 . + 0 ID=Thaps32944;Parent=Thaps32944;rank=1 chr3 . exon 555486 555630 . + . ID=Thaps32944.1;Parent=Thaps32944;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 555736 556331 . + 0 ID=Thaps32944;Parent=Thaps32944;rank=2 chr3 . exon 555736 556331 . + . ID=Thaps32944.2;Parent=Thaps32944;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . repeat_region 558207 558237 . ? . description=dust chr3 . repeat_region 563931 563990 . ? . description=dust chr3 ensembl protein_coding_gene 559582 563538 . - . ID=Thaps21673;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXB8];external_name=Thaps21673;logic_name=jgi_thaps3 chr3 ensembl transcript 559582 563538 . - . ID=Thaps21673;Parent=Thaps21673;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 559582 562719 . - 0 ID=Thaps21673;Parent=Thaps21673;rank=2 chr3 . exon 559582 562719 . - . ID=Thaps21673.2;Parent=Thaps21673;constitutive=1;rank=2 chr3 . CDS 562810 563538 . - 0 ID=Thaps21673;Parent=Thaps21673;rank=1 chr3 . exon 562810 563538 . - . ID=Thaps21673.1;Parent=Thaps21673;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 558248 559479 . + . ID=Thaps268443;biotype=protein_coding;description=Phosphoribosylaminoimidazole-succinocarboxamide synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BXB7];external_name=Thaps268443;logic_name=jgi_thaps3 chr3 ensembl transcript 558248 559479 . + . ID=Thaps268443;Parent=Thaps268443;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 558248 558606 . + 0 ID=Thaps268443;Parent=Thaps268443;rank=1 chr3 . exon 558248 558606 . + . ID=Thaps268443.1;Parent=Thaps268443;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 558693 558780 . + 0 ID=Thaps268443;Parent=Thaps268443;rank=2 chr3 . exon 558693 558780 . + . ID=Thaps268443.2;Parent=Thaps268443;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 558934 559479 . + 0 ID=Thaps268443;Parent=Thaps268443;rank=3 chr3 . exon 558934 559479 . + . ID=Thaps268443.3;Parent=Thaps268443;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 567031 569484 . - . ID=Thaps3279;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXC0];external_name=Thaps3279;logic_name=jgi_thaps3 chr3 ensembl transcript 567031 569484 . - . ID=Thaps3279;Parent=Thaps3279;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 567031 567057 . - 0 ID=Thaps3279;Parent=Thaps3279;rank=3 chr3 . exon 567031 567057 . - . ID=Thaps3279.3;Parent=Thaps3279;constitutive=1;rank=3 chr3 . CDS 567452 568012 . - 0 ID=Thaps3279;Parent=Thaps3279;rank=2 chr3 . exon 567452 568012 . - . ID=Thaps3279.2;Parent=Thaps3279;constitutive=1;rank=2 chr3 . CDS 568099 569484 . - 0 ID=Thaps3279;Parent=Thaps3279;rank=1 chr3 ensembl protein_coding_gene 564001 566781 . + . ID=Thaps39824;biotype=protein_coding;description=Member of the HSP104/clp superfamily [Source:UniProtKB/TrEMBL%3BAcc:B8BXB9];external_name=HSP104;logic_name=jgi_thaps3 chr3 ensembl transcript 564001 566781 . + . ID=Thaps39824;Parent=Thaps39824;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 564001 566781 . + 0 ID=Thaps39824;Parent=Thaps39824;rank=1 chr3 . exon 564001 566781 . + . ID=Thaps39824.1;Parent=Thaps39824;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 575812 578105 . + . ID=Thaps21676;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXC3];external_name=Thaps21676;logic_name=jgi_thaps3 chr3 ensembl transcript 575812 578105 . + . ID=Thaps21676;Parent=Thaps21676;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 575812 577815 . + 0 ID=Thaps21676;Parent=Thaps21676;rank=1 chr3 . exon 575812 577815 . + . ID=Thaps21676.1;Parent=Thaps21676;constitutive=1;rank=1 chr3 . CDS 577908 578105 . + 0 ID=Thaps21676;Parent=Thaps21676;rank=2 chr3 ensembl protein_coding_gene 571802 574023 . - . ID=Thaps32744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXC2];external_name=Thaps32744;logic_name=jgi_thaps3 chr3 ensembl transcript 571802 574023 . - . ID=Thaps32744;Parent=Thaps32744;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 571802 572813 . - 0 ID=Thaps32744;Parent=Thaps32744;rank=2 chr3 . exon 571802 572813 . - . ID=Thaps32744.2;Parent=Thaps32744;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 572900 574023 . - 0 ID=Thaps32744;Parent=Thaps32744;rank=1 chr3 . exon 572900 574023 . - . ID=Thaps32744.1;Parent=Thaps32744;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . exon 568099 569484 . - . ID=Thaps3279.1;Parent=Thaps3279;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 569797 571512 . + . ID=Thaps3280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXC1];external_name=Thaps3280;logic_name=jgi_thaps3 chr3 ensembl transcript 569797 571512 . + . ID=Thaps3280;Parent=Thaps3280;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 569797 571512 . + 0 ID=Thaps3280;Parent=Thaps3280;rank=1 chr3 . exon 569797 571512 . + . ID=Thaps3280.1;Parent=Thaps3280;constitutive=1;rank=1 chr3 . exon 577908 578105 . + . ID=Thaps21676.2;Parent=Thaps21676;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 578484 579701 . + . ID=Thaps21677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXC4];external_name=Thaps21677;logic_name=jgi_thaps3 chr3 ensembl transcript 578484 579701 . + . ID=Thaps21677;Parent=Thaps21677;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 578484 579701 . + 0 ID=Thaps21677;Parent=Thaps21677;rank=1 chr3 . exon 578484 579701 . + . ID=Thaps21677.1;Parent=Thaps21677;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 581821 585015 . - . ID=Thaps268446;biotype=protein_coding;description=Member of the clp superfamily%2C regulatory gamma subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BXC6];external_name=CLPC1;logic_name=jgi_thaps3 chr3 ensembl transcript 581821 585015 . - . ID=Thaps268446;Parent=Thaps268446;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 581821 582414 . - 0 ID=Thaps268446;Parent=Thaps268446;rank=7 chr3 . exon 581821 582414 . - . ID=Thaps268446.7;Parent=Thaps268446;constitutive=1;rank=7 chr3 . CDS 582523 582819 . - 0 ID=Thaps268446;Parent=Thaps268446;rank=6 chr3 . exon 582523 582819 . - . ID=Thaps268446.6;Parent=Thaps268446;constitutive=1;rank=6 chr3 . CDS 582892 583271 . - 0 ID=Thaps268446;Parent=Thaps268446;rank=5 chr3 . exon 582892 583271 . - . ID=Thaps268446.5;Parent=Thaps268446;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 583353 583831 . - 0 ID=Thaps268446;Parent=Thaps268446;rank=4 chr3 . exon 583353 583831 . - . ID=Thaps268446.4;Parent=Thaps268446;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 583937 584284 . - 0 ID=Thaps268446;Parent=Thaps268446;rank=3 chr3 . exon 583937 584284 . - . ID=Thaps268446.3;Parent=Thaps268446;constitutive=1;rank=3 chr3 . CDS 584384 584551 . - 0 ID=Thaps268446;Parent=Thaps268446;rank=2 chr3 . exon 584384 584551 . - . ID=Thaps268446.2;Parent=Thaps268446;constitutive=1;rank=2 chr3 . CDS 584609 585015 . - 0 ID=Thaps268446;Parent=Thaps268446;rank=1 chr3 . exon 584609 585015 . - . ID=Thaps268446.1;Parent=Thaps268446;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 579827 581569 . - . ID=Thaps3284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXC5];external_name=Thaps3284;logic_name=jgi_thaps3 chr3 ensembl transcript 579827 581569 . - . ID=Thaps3284;Parent=Thaps3284;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 579827 581569 . - 0 ID=Thaps3284;Parent=Thaps3284;rank=1 chr3 . exon 579827 581569 . - . ID=Thaps3284.1;Parent=Thaps3284;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 585800 589824 . + . ID=Thaps3286;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXC7];external_name=Thaps3286;logic_name=jgi_thaps3 chr3 ensembl transcript 585800 589824 . + . ID=Thaps3286;Parent=Thaps3286;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 585800 586413 . + 0 ID=Thaps3286;Parent=Thaps3286;rank=1 chr3 . exon 585800 586413 . + . ID=Thaps3286.1;Parent=Thaps3286;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 586566 586721 . + 0 ID=Thaps3286;Parent=Thaps3286;rank=2 chr3 . exon 586566 586721 . + . ID=Thaps3286.2;Parent=Thaps3286;constitutive=1;rank=2 chr3 . CDS 586784 587021 . + 0 ID=Thaps3286;Parent=Thaps3286;rank=3 chr3 . exon 586784 587021 . + . ID=Thaps3286.3;Parent=Thaps3286;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 587249 587720 . + 0 ID=Thaps3286;Parent=Thaps3286;rank=4 chr3 . exon 587249 587720 . + . ID=Thaps3286.4;Parent=Thaps3286;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 587798 589824 . + 0 ID=Thaps3286;Parent=Thaps3286;rank=5 chr3 ensembl protein_coding_gene 591231 593591 . + . ID=Thaps21679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXC9];external_name=Thaps21679;logic_name=jgi_thaps3 chr3 ensembl transcript 591231 593591 . + . ID=Thaps21679;Parent=Thaps21679;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 591231 592952 . + 0 ID=Thaps21679;Parent=Thaps21679;rank=1 chr3 . exon 591231 592952 . + . ID=Thaps21679.1;Parent=Thaps21679;constitutive=1;rank=1 chr3 . CDS 593056 593151 . + 0 ID=Thaps21679;Parent=Thaps21679;rank=2 chr3 . exon 593056 593151 . + . ID=Thaps21679.2;Parent=Thaps21679;constitutive=1;rank=2 chr3 . CDS 593226 593591 . + 0 ID=Thaps21679;Parent=Thaps21679;rank=3 chr3 . exon 593226 593591 . + . ID=Thaps21679.3;Parent=Thaps21679;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 594712 595707 . - . ID=Thaps21680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD0];external_name=Thaps21680;logic_name=jgi_thaps3 chr3 ensembl transcript 594712 595707 . - . ID=Thaps21680;Parent=Thaps21680;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 594712 595398 . - 0 ID=Thaps21680;Parent=Thaps21680;rank=2 chr3 . exon 594712 595398 . - . ID=Thaps21680.2;Parent=Thaps21680;constitutive=1;rank=2 chr3 . CDS 595495 595707 . - 0 ID=Thaps21680;Parent=Thaps21680;rank=1 chr3 . exon 595495 595707 . - . ID=Thaps21680.1;Parent=Thaps21680;constitutive=1;rank=1 chr3 . exon 587798 589824 . + . ID=Thaps3286.5;Parent=Thaps3286;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 589952 590716 . - . ID=Thaps3287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXC8];external_name=Thaps3287;logic_name=jgi_thaps3 chr3 ensembl transcript 589952 590716 . - . ID=Thaps3287;Parent=Thaps3287;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 589952 590716 . - 0 ID=Thaps3287;Parent=Thaps3287;rank=1 chr3 . exon 589952 590716 . - . ID=Thaps3287.1;Parent=Thaps3287;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 602676 604481 . - . ID=Thaps21681;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD2];external_name=Thaps21681;logic_name=jgi_thaps3 chr3 ensembl transcript 602676 604481 . - . ID=Thaps21681;Parent=Thaps21681;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 602676 604481 . - 0 ID=Thaps21681;Parent=Thaps21681;rank=1 chr3 . exon 602676 604481 . - . ID=Thaps21681.1;Parent=Thaps21681;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 597635 600803 . - . ID=Thaps261726;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD1];external_name=Thaps261726;logic_name=jgi_thaps3 chr3 ensembl transcript 597635 600803 . - . ID=Thaps261726;Parent=Thaps261726;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 597635 597837 . - 0 ID=Thaps261726;Parent=Thaps261726;rank=7 chr3 . exon 597635 597837 . - . ID=Thaps261726.7;Parent=Thaps261726;constitutive=1;ensembl_end_phase=2;rank=7 chr3 . CDS 597982 598144 . - 0 ID=Thaps261726;Parent=Thaps261726;rank=6 chr3 . exon 597982 598144 . - . ID=Thaps261726.6;Parent=Thaps261726;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 598223 598608 . - 0 ID=Thaps261726;Parent=Thaps261726;rank=5 chr3 . exon 598223 598608 . - . ID=Thaps261726.5;Parent=Thaps261726;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 598696 599117 . - 0 ID=Thaps261726;Parent=Thaps261726;rank=4 chr3 . exon 598696 599117 . - . ID=Thaps261726.4;Parent=Thaps261726;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 599198 599334 . - 0 ID=Thaps261726;Parent=Thaps261726;rank=3 chr3 . exon 599198 599334 . - . ID=Thaps261726.3;Parent=Thaps261726;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 599415 599940 . - 0 ID=Thaps261726;Parent=Thaps261726;rank=2 chr3 . exon 599415 599940 . - . ID=Thaps261726.2;Parent=Thaps261726;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 600040 600803 . - 0 ID=Thaps261726;Parent=Thaps261726;rank=1 chr3 . exon 600040 600803 . - . ID=Thaps261726.1;Parent=Thaps261726;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 604746 606101 . + . ID=Thaps3292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD3];external_name=Thaps3292;logic_name=jgi_thaps3 chr3 ensembl transcript 604746 606101 . + . ID=Thaps3292;Parent=Thaps3292;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 604746 606101 . + 0 ID=Thaps3292;Parent=Thaps3292;rank=1 chr3 . exon 604746 606101 . + . ID=Thaps3292.1;Parent=Thaps3292;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 606366 606635 . - . ID=Thaps33219;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD4];external_name=Thaps33219;logic_name=jgi_thaps3 chr3 ensembl transcript 606366 606635 . - . ID=Thaps33219;Parent=Thaps33219;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 606366 606635 . - 0 ID=Thaps33219;Parent=Thaps33219;rank=1 chr3 . exon 606366 606635 . - . ID=Thaps33219.1;Parent=Thaps33219;constitutive=1;rank=1 chr3 . repeat_region 611224 611243 . ? . description=trf chr3 ensembl protein_coding_gene 608338 610807 . - . ID=Thaps21682;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD5];external_name=Thaps21682;logic_name=jgi_thaps3 chr3 ensembl transcript 608338 610807 . - . ID=Thaps21682;Parent=Thaps21682;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 608338 609227 . - 0 ID=Thaps21682;Parent=Thaps21682;rank=2 chr3 . exon 608338 609227 . - . ID=Thaps21682.2;Parent=Thaps21682;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 609307 610807 . - 0 ID=Thaps21682;Parent=Thaps21682;rank=1 chr3 . exon 609307 610807 . - . ID=Thaps21682.1;Parent=Thaps21682;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 614603 616333 . + . ID=Thaps21683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD7];external_name=Thaps21683;logic_name=jgi_thaps3 chr3 ensembl transcript 614603 616333 . + . ID=Thaps21683;Parent=Thaps21683;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 614603 615673 . + 0 ID=Thaps21683;Parent=Thaps21683;rank=1 chr3 . exon 614603 615673 . + . ID=Thaps21683.1;Parent=Thaps21683;constitutive=1;rank=1 chr3 . CDS 615758 615938 . + 0 ID=Thaps21683;Parent=Thaps21683;rank=2 chr3 . exon 615758 615938 . + . ID=Thaps21683.2;Parent=Thaps21683;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 616044 616333 . + 0 ID=Thaps21683;Parent=Thaps21683;rank=3 chr3 . exon 616044 616333 . + . ID=Thaps21683.3;Parent=Thaps21683;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 612400 613821 . - . ID=Thaps261727;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD6];external_name=Thaps261727;logic_name=jgi_thaps3 chr3 ensembl transcript 612400 613821 . - . ID=Thaps261727;Parent=Thaps261727;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 612400 612510 . - 0 ID=Thaps261727;Parent=Thaps261727;rank=6 chr3 . exon 612400 612510 . - . ID=Thaps261727.6;Parent=Thaps261727;constitutive=1;rank=6 chr3 . CDS 612599 612794 . - 0 ID=Thaps261727;Parent=Thaps261727;rank=5 chr3 . exon 612599 612794 . - . ID=Thaps261727.5;Parent=Thaps261727;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 612991 613233 . - 0 ID=Thaps261727;Parent=Thaps261727;rank=4 chr3 . exon 612991 613233 . - . ID=Thaps261727.4;Parent=Thaps261727;constitutive=1;rank=4 chr3 . CDS 613287 613319 . - 0 ID=Thaps261727;Parent=Thaps261727;rank=3 chr3 . exon 613287 613319 . - . ID=Thaps261727.3;Parent=Thaps261727;constitutive=1;rank=3 chr3 . CDS 613441 613467 . - 0 ID=Thaps261727;Parent=Thaps261727;rank=2 chr3 . exon 613441 613467 . - . ID=Thaps261727.2;Parent=Thaps261727;constitutive=1;rank=2 chr3 . CDS 613552 613821 . - 0 ID=Thaps261727;Parent=Thaps261727;rank=1 chr3 . exon 613552 613821 . - . ID=Thaps261727.1;Parent=Thaps261727;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 616732 617550 . - . ID=Thaps268447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD8];external_name=Thaps268447;logic_name=jgi_thaps3 chr3 ensembl transcript 616732 617550 . - . ID=Thaps268447;Parent=Thaps268447;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 616732 617550 . - 0 ID=Thaps268447;Parent=Thaps268447;rank=1 chr3 . exon 616732 617550 . - . ID=Thaps268447.1;Parent=Thaps268447;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 623855 625372 . - . ID=Thaps21685;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXE3];external_name=Thaps21685;logic_name=jgi_thaps3 chr3 ensembl transcript 623855 625372 . - . ID=Thaps21685;Parent=Thaps21685;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 623855 625372 . - 0 ID=Thaps21685;Parent=Thaps21685;rank=1 chr3 . exon 623855 625372 . - . ID=Thaps21685.1;Parent=Thaps21685;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 627175 627986 . - . ID=Thaps21686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXE5];external_name=Thaps21686;logic_name=jgi_thaps3 chr3 ensembl transcript 627175 627986 . - . ID=Thaps21686;Parent=Thaps21686;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 627175 627297 . - 0 ID=Thaps21686;Parent=Thaps21686;rank=4 chr3 . exon 627175 627297 . - . ID=Thaps21686.4;Parent=Thaps21686;constitutive=1;rank=4 chr3 . CDS 627429 627482 . - 0 ID=Thaps21686;Parent=Thaps21686;rank=3 chr3 . exon 627429 627482 . - . ID=Thaps21686.3;Parent=Thaps21686;constitutive=1;rank=3 chr3 . CDS 627576 627645 . - 0 ID=Thaps21686;Parent=Thaps21686;rank=2 chr3 . CDS 627850 627986 . - 0 ID=Thaps21686;Parent=Thaps21686;rank=1 chr3 ensembl protein_coding_gene 618657 619592 . + . ID=Thaps32955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXD9];external_name=Thaps32955;logic_name=jgi_thaps3 chr3 ensembl transcript 618657 619592 . + . ID=Thaps32955;Parent=Thaps32955;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 618657 619592 . + 0 ID=Thaps32955;Parent=Thaps32955;rank=1 chr3 . exon 618657 619592 . + . ID=Thaps32955.1;Parent=Thaps32955;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 620902 621747 . + . ID=Thaps3298;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXE0];external_name=Thaps3298;logic_name=jgi_thaps3 chr3 ensembl transcript 620902 621747 . + . ID=Thaps3298;Parent=Thaps3298;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 620902 621747 . + 0 ID=Thaps3298;Parent=Thaps3298;rank=1 chr3 . exon 620902 621747 . + . ID=Thaps3298.1;Parent=Thaps3298;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 622110 622640 . - . ID=Thaps3299;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXE1];external_name=Thaps3299;logic_name=jgi_thaps3 chr3 ensembl transcript 622110 622640 . - . ID=Thaps3299;Parent=Thaps3299;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 622110 622265 . - 0 ID=Thaps3299;Parent=Thaps3299;rank=2 chr3 . exon 622110 622265 . - . ID=Thaps3299.2;Parent=Thaps3299;constitutive=1;rank=2 chr3 . CDS 622377 622640 . - 0 ID=Thaps3299;Parent=Thaps3299;rank=1 chr3 . exon 622377 622640 . - . ID=Thaps3299.1;Parent=Thaps3299;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 622970 623744 . + . ID=Thaps3300;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXE2];external_name=Thaps3300;logic_name=jgi_thaps3 chr3 ensembl transcript 622970 623744 . + . ID=Thaps3300;Parent=Thaps3300;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 622970 623102 . + 0 ID=Thaps3300;Parent=Thaps3300;rank=1 chr3 . exon 622970 623102 . + . ID=Thaps3300.1;Parent=Thaps3300;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 623188 623744 . + 0 ID=Thaps3300;Parent=Thaps3300;rank=2 chr3 . exon 623188 623744 . + . ID=Thaps3300.2;Parent=Thaps3300;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 626249 626740 . - . ID=Thaps3302;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXE4];external_name=Thaps3302;logic_name=jgi_thaps3 chr3 ensembl transcript 626249 626740 . - . ID=Thaps3302;Parent=Thaps3302;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 626249 626371 . - 0 ID=Thaps3302;Parent=Thaps3302;rank=2 chr3 . exon 626249 626371 . - . ID=Thaps3302.2;Parent=Thaps3302;constitutive=1;rank=2 chr3 . CDS 626474 626740 . - 0 ID=Thaps3302;Parent=Thaps3302;rank=1 chr3 . exon 626474 626740 . - . ID=Thaps3302.1;Parent=Thaps3302;constitutive=1;rank=1 chr3 . repeat_region 634416 634442 . ? . description=trf chr3 . repeat_region 634416 634457 . ? . description=dust chr3 ensembl protein_coding_gene 633474 633902 . - . ID=Thaps16828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXE8];external_name=Thaps16828;logic_name=jgi_thaps3 chr3 ensembl transcript 633474 633902 . - . ID=Thaps16828;Parent=Thaps16828;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 633474 633902 . - 0 ID=Thaps16828;Parent=Thaps16828;rank=1 chr3 . exon 633474 633902 . - . ID=Thaps16828.1;Parent=Thaps16828;constitutive=1;rank=1 chr3 . exon 627576 627645 . - . ID=Thaps21686.2;Parent=Thaps21686;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . exon 627850 627986 . - . ID=Thaps21686.1;Parent=Thaps21686;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 634592 635363 . + . ID=Thaps268449;biotype=protein_coding;description=Glutathione s-transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BXE9];external_name=Thaps268449;logic_name=jgi_thaps3 chr3 ensembl transcript 634592 635363 . + . ID=Thaps268449;Parent=Thaps268449;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 634592 634719 . + 0 ID=Thaps268449;Parent=Thaps268449;rank=1 chr3 . exon 634592 634719 . + . ID=Thaps268449.1;Parent=Thaps268449;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 634835 635363 . + 0 ID=Thaps268449;Parent=Thaps268449;rank=2 chr3 . exon 634835 635363 . + . ID=Thaps268449.2;Parent=Thaps268449;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 628744 629946 . + . ID=Thaps3304;biotype=protein_coding;description=Glycylpeptide N-tetradecanoyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BXE6];external_name=MNT1;logic_name=jgi_thaps3 chr3 ensembl transcript 628744 629946 . + . ID=Thaps3304;Parent=Thaps3304;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 628744 629946 . + 0 ID=Thaps3304;Parent=Thaps3304;rank=1 chr3 . exon 628744 629946 . + . ID=Thaps3304.1;Parent=Thaps3304;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 630246 631375 . + . ID=Thaps3305;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXE7];external_name=Thaps3305;logic_name=jgi_thaps3 chr3 ensembl transcript 630246 631375 . + . ID=Thaps3305;Parent=Thaps3305;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 630246 630377 . + 0 ID=Thaps3305;Parent=Thaps3305;rank=1 chr3 . exon 630246 630377 . + . ID=Thaps3305.1;Parent=Thaps3305;constitutive=1;rank=1 chr3 . CDS 630485 631375 . + 0 ID=Thaps3305;Parent=Thaps3305;rank=2 chr3 . exon 630485 631375 . + . ID=Thaps3305.2;Parent=Thaps3305;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 636794 637447 . - . ID=Thaps3308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXF0];external_name=Thaps3308;logic_name=jgi_thaps3 chr3 ensembl transcript 636794 637447 . - . ID=Thaps3308;Parent=Thaps3308;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 636794 637447 . - 0 ID=Thaps3308;Parent=Thaps3308;rank=1 chr3 . exon 636794 637447 . - . ID=Thaps3308.1;Parent=Thaps3308;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 637810 638930 . + . ID=Thaps21689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXF1];external_name=Thaps21689;logic_name=jgi_thaps3 chr3 ensembl transcript 637810 638930 . + . ID=Thaps21689;Parent=Thaps21689;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 637810 638529 . + 0 ID=Thaps21689;Parent=Thaps21689;rank=1 chr3 . exon 637810 638529 . + . ID=Thaps21689.1;Parent=Thaps21689;constitutive=1;rank=1 chr3 . CDS 638622 638687 . + 0 ID=Thaps21689;Parent=Thaps21689;rank=2 chr3 . exon 638622 638687 . + . ID=Thaps21689.2;Parent=Thaps21689;constitutive=1;rank=2 chr3 . CDS 638772 638930 . + 0 ID=Thaps21689;Parent=Thaps21689;rank=3 chr3 . exon 638772 638930 . + . ID=Thaps21689.3;Parent=Thaps21689;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 640616 641482 . + . ID=Thaps21690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXF3];external_name=Thaps21690;logic_name=jgi_thaps3 chr3 ensembl transcript 640616 641482 . + . ID=Thaps21690;Parent=Thaps21690;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 640616 640764 . + 0 ID=Thaps21690;Parent=Thaps21690;rank=1 chr3 . exon 640616 640764 . + . ID=Thaps21690.1;Parent=Thaps21690;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 640903 641020 . + 0 ID=Thaps21690;Parent=Thaps21690;rank=2 chr3 . exon 640903 641020 . + . ID=Thaps21690.2;Parent=Thaps21690;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 641132 641482 . + 0 ID=Thaps21690;Parent=Thaps21690;rank=3 chr3 . exon 641132 641482 . + . ID=Thaps21690.3;Parent=Thaps21690;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 639041 640447 . - . ID=Thaps3310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXF2];external_name=Thaps3310;logic_name=jgi_thaps3 chr3 ensembl transcript 639041 640447 . - . ID=Thaps3310;Parent=Thaps3310;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 639041 640447 . - 0 ID=Thaps3310;Parent=Thaps3310;rank=1 chr3 . exon 639041 640447 . - . ID=Thaps3310.1;Parent=Thaps3310;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 644520 645668 . - . ID=Thaps3313;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXF5];external_name=Thaps3313;logic_name=jgi_thaps3 chr3 ensembl transcript 644520 645668 . - . ID=Thaps3313;Parent=Thaps3313;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 644520 645002 . - 0 ID=Thaps3313;Parent=Thaps3313;rank=2 chr3 . exon 644520 645002 . - . ID=Thaps3313.2;Parent=Thaps3313;constitutive=1;rank=2 chr3 . CDS 645081 645668 . - 0 ID=Thaps3313;Parent=Thaps3313;rank=1 chr3 . exon 645081 645668 . - . ID=Thaps3313.1;Parent=Thaps3313;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 647186 647527 . - . ID=Thaps3314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXF6];external_name=Thaps3314;logic_name=jgi_thaps3 chr3 ensembl transcript 647186 647527 . - . ID=Thaps3314;Parent=Thaps3314;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 647186 647527 . - 0 ID=Thaps3314;Parent=Thaps3314;rank=1 chr3 . exon 647186 647527 . - . ID=Thaps3314.1;Parent=Thaps3314;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 641668 643128 . - . ID=Thaps39841;biotype=protein_coding;description=Anion-transporting ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8BXF4];external_name=Thaps39841;logic_name=jgi_thaps3 chr3 ensembl transcript 641668 643128 . - . ID=Thaps39841;Parent=Thaps39841;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 641668 641854 . - 0 ID=Thaps39841;Parent=Thaps39841;rank=3 chr3 . exon 641668 641854 . - . ID=Thaps39841.3;Parent=Thaps39841;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 641906 642591 . - 0 ID=Thaps39841;Parent=Thaps39841;rank=2 chr3 . exon 641906 642591 . - . ID=Thaps39841.2;Parent=Thaps39841;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 642961 643128 . - 0 ID=Thaps39841;Parent=Thaps39841;rank=1 chr3 . exon 642961 643128 . - . ID=Thaps39841.1;Parent=Thaps39841;constitutive=1;rank=1 chr3 . repeat_region 647904 647937 . ? . description=dust chr3 . repeat_region 647904 647942 . ? . description=trf chr3 . repeat_region 649172 649179 . ? . description=dust chr3 ensembl protein_coding_gene 652773 653831 . + . ID=Thaps21692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXF8];external_name=Thaps21692;logic_name=jgi_thaps3 chr3 ensembl transcript 652773 653831 . + . ID=Thaps21692;Parent=Thaps21692;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 652773 653831 . + 0 ID=Thaps21692;Parent=Thaps21692;rank=1 chr3 . exon 652773 653831 . + . ID=Thaps21692.1;Parent=Thaps21692;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 654280 655164 . + . ID=Thaps268451;biotype=protein_coding;description=Atp-dependant RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BXF9];external_name=Thaps268451;logic_name=jgi_thaps3 chr3 ensembl transcript 654280 655164 . + . ID=Thaps268451;Parent=Thaps268451;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 654280 655164 . + 0 ID=Thaps268451;Parent=Thaps268451;rank=1 chr3 . exon 654280 655164 . + . ID=Thaps268451.1;Parent=Thaps268451;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 648172 652368 . + . ID=Thaps3315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXF7];external_name=Thaps3315;logic_name=jgi_thaps3 chr3 ensembl transcript 648172 652368 . + . ID=Thaps3315;Parent=Thaps3315;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 648172 652368 . + 0 ID=Thaps3315;Parent=Thaps3315;rank=1 chr3 . exon 648172 652368 . + . ID=Thaps3315.1;Parent=Thaps3315;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 656929 657779 . + . ID=Thaps3318;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXG0];external_name=Thaps3318;logic_name=jgi_thaps3 chr3 ensembl transcript 656929 657779 . + . ID=Thaps3318;Parent=Thaps3318;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 656929 657111 . + 0 ID=Thaps3318;Parent=Thaps3318;rank=1 chr3 . exon 656929 657111 . + . ID=Thaps3318.1;Parent=Thaps3318;constitutive=1;rank=1 chr3 . CDS 657273 657779 . + 0 ID=Thaps3318;Parent=Thaps3318;rank=2 chr3 . exon 657273 657779 . + . ID=Thaps3318.2;Parent=Thaps3318;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 666139 666807 . + . ID=Thaps17480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXG4];external_name=Thaps17480;logic_name=jgi_thaps3 chr3 ensembl transcript 666139 666807 . + . ID=Thaps17480;Parent=Thaps17480;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 666139 666432 . + 0 ID=Thaps17480;Parent=Thaps17480;rank=1 chr3 . exon 666139 666432 . + . ID=Thaps17480.1;Parent=Thaps17480;constitutive=1;rank=1 chr3 . CDS 666484 666807 . + 0 ID=Thaps17480;Parent=Thaps17480;rank=2 chr3 . exon 666484 666807 . + . ID=Thaps17480.2;Parent=Thaps17480;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 657969 659175 . - . ID=Thaps261734;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXG1];external_name=Thaps261734;logic_name=jgi_thaps3 chr3 ensembl transcript 657969 659175 . - . ID=Thaps261734;Parent=Thaps261734;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 657969 659175 . - 0 ID=Thaps261734;Parent=Thaps261734;rank=1 chr3 . exon 657969 659175 . - . ID=Thaps261734.1;Parent=Thaps261734;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 661518 662864 . + . ID=Thaps3320;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXG2];external_name=Thaps3320;logic_name=jgi_thaps3 chr3 ensembl transcript 661518 662864 . + . ID=Thaps3320;Parent=Thaps3320;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 661518 662864 . + 0 ID=Thaps3320;Parent=Thaps3320;rank=1 chr3 . exon 661518 662864 . + . ID=Thaps3320.1;Parent=Thaps3320;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 663130 665582 . - . ID=Thaps3321;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXG3];external_name=Thaps3321;logic_name=jgi_thaps3 chr3 ensembl transcript 663130 665582 . - . ID=Thaps3321;Parent=Thaps3321;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 663130 663145 . - 0 ID=Thaps3321;Parent=Thaps3321;rank=3 chr3 . exon 663130 663145 . - . ID=Thaps3321.3;Parent=Thaps3321;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 663174 664441 . - 0 ID=Thaps3321;Parent=Thaps3321;rank=2 chr3 . exon 663174 664441 . - . ID=Thaps3321.2;Parent=Thaps3321;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 664479 665582 . - 0 ID=Thaps3321;Parent=Thaps3321;rank=1 chr3 . exon 664479 665582 . - . ID=Thaps3321.1;Parent=Thaps3321;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 667116 667889 . - . ID=Thaps3322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXG5];external_name=Thaps3322;logic_name=jgi_thaps3 chr3 ensembl transcript 667116 667889 . - . ID=Thaps3322;Parent=Thaps3322;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 667116 667889 . - 0 ID=Thaps3322;Parent=Thaps3322;rank=1 chr3 . exon 667116 667889 . - . ID=Thaps3322.1;Parent=Thaps3322;constitutive=1;rank=1 chr3 . repeat_region 673126 673154 . ? . description=trf chr3 ensembl protein_coding_gene 673371 675218 . + . ID=Thaps21695;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXG8];external_name=Thaps21695;logic_name=jgi_thaps3 chr3 ensembl transcript 673371 675218 . + . ID=Thaps21695;Parent=Thaps21695;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 673371 675218 . + 0 ID=Thaps21695;Parent=Thaps21695;rank=1 chr3 . exon 673371 675218 . + . ID=Thaps21695.1;Parent=Thaps21695;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 668185 669774 . + . ID=Thaps3323;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXG6];external_name=Thaps3323;logic_name=jgi_thaps3 chr3 ensembl transcript 668185 669774 . + . ID=Thaps3323;Parent=Thaps3323;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 668185 669528 . + 0 ID=Thaps3323;Parent=Thaps3323;rank=1 chr3 . exon 668185 669528 . + . ID=Thaps3323.1;Parent=Thaps3323;constitutive=1;rank=1 chr3 . CDS 669555 669699 . + 0 ID=Thaps3323;Parent=Thaps3323;rank=2 chr3 . exon 669555 669699 . + . ID=Thaps3323.2;Parent=Thaps3323;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 669743 669774 . + 0 ID=Thaps3323;Parent=Thaps3323;rank=3 chr3 . exon 669743 669774 . + . ID=Thaps3323.3;Parent=Thaps3323;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 675379 676800 . - . ID=Thaps3326;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXG9];external_name=Thaps3326;logic_name=jgi_thaps3 chr3 ensembl transcript 675379 676800 . - . ID=Thaps3326;Parent=Thaps3326;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 675379 676232 . - 0 ID=Thaps3326;Parent=Thaps3326;rank=2 chr3 . exon 675379 676232 . - . ID=Thaps3326.2;Parent=Thaps3326;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 676266 676800 . - 0 ID=Thaps3326;Parent=Thaps3326;rank=1 chr3 . exon 676266 676800 . - . ID=Thaps3326.1;Parent=Thaps3326;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 677111 677962 . + . ID=Thaps3327;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXH0];external_name=Thaps3327;logic_name=jgi_thaps3 chr3 ensembl transcript 677111 677962 . + . ID=Thaps3327;Parent=Thaps3327;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 677111 677672 . + 0 ID=Thaps3327;Parent=Thaps3327;rank=1 chr3 . exon 677111 677672 . + . ID=Thaps3327.1;Parent=Thaps3327;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 677751 677962 . + 0 ID=Thaps3327;Parent=Thaps3327;rank=2 chr3 ensembl protein_coding_gene 670058 672606 . - . ID=Thaps39845;biotype=protein_coding;description=DNA topoisomerase IV%2C ATP/GTP binding site [Source:UniProtKB/TrEMBL%3BAcc:B8BXG7];external_name=DNA_TOPOIV;logic_name=jgi_thaps3 chr3 ensembl transcript 670058 672606 . - . ID=Thaps39845;Parent=Thaps39845;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 670058 671911 . - 0 ID=Thaps39845;Parent=Thaps39845;rank=2 chr3 . exon 670058 671911 . - . ID=Thaps39845.2;Parent=Thaps39845;constitutive=1;rank=2 chr3 . CDS 671998 672606 . - 0 ID=Thaps39845;Parent=Thaps39845;rank=1 chr3 . exon 671998 672606 . - . ID=Thaps39845.1;Parent=Thaps39845;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 679933 682418 . - . ID=Thaps268453;biotype=protein_coding;description=D-lactate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BXH2];external_name=Thaps268453;logic_name=jgi_thaps3 chr3 ensembl transcript 679933 682418 . - . ID=Thaps268453;Parent=Thaps268453;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 679933 680795 . - 0 ID=Thaps268453;Parent=Thaps268453;rank=6 chr3 . exon 679933 680795 . - . ID=Thaps268453.6;Parent=Thaps268453;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 680870 680981 . - 0 ID=Thaps268453;Parent=Thaps268453;rank=5 chr3 . exon 680870 680981 . - . ID=Thaps268453.5;Parent=Thaps268453;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 681062 681214 . - 0 ID=Thaps268453;Parent=Thaps268453;rank=4 chr3 . exon 681062 681214 . - . ID=Thaps268453.4;Parent=Thaps268453;constitutive=1;rank=4 chr3 . CDS 681278 681674 . - 0 ID=Thaps268453;Parent=Thaps268453;rank=3 chr3 . exon 681278 681674 . - . ID=Thaps268453.3;Parent=Thaps268453;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 681753 681855 . - 0 ID=Thaps268453;Parent=Thaps268453;rank=2 chr3 . exon 681753 681855 . - . ID=Thaps268453.2;Parent=Thaps268453;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 681929 682418 . - 0 ID=Thaps268453;Parent=Thaps268453;rank=1 chr3 . exon 681929 682418 . - . ID=Thaps268453.1;Parent=Thaps268453;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . exon 677751 677962 . + . ID=Thaps3327.2;Parent=Thaps3327;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 678117 679394 . - . ID=Thaps3328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXH1];external_name=Thaps3328;logic_name=jgi_thaps3 chr3 ensembl transcript 678117 679394 . - . ID=Thaps3328;Parent=Thaps3328;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 678117 679394 . - 0 ID=Thaps3328;Parent=Thaps3328;rank=1 chr3 . exon 678117 679394 . - . ID=Thaps3328.1;Parent=Thaps3328;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 683679 685253 . + . ID=Thaps3330;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXH3];external_name=Thaps3330;logic_name=jgi_thaps3 chr3 ensembl transcript 683679 685253 . + . ID=Thaps3330;Parent=Thaps3330;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 683679 685136 . + 0 ID=Thaps3330;Parent=Thaps3330;rank=1 chr3 . exon 683679 685136 . + . ID=Thaps3330.1;Parent=Thaps3330;constitutive=1;rank=1 chr3 . CDS 685224 685253 . + 0 ID=Thaps3330;Parent=Thaps3330;rank=2 chr3 . exon 685224 685253 . + . ID=Thaps3330.2;Parent=Thaps3330;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 685648 689544 . - . ID=Thaps3331;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXH4];external_name=Thaps3331;logic_name=jgi_thaps3 chr3 ensembl transcript 685648 689544 . - . ID=Thaps3331;Parent=Thaps3331;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 685648 685718 . - 0 ID=Thaps3331;Parent=Thaps3331;rank=3 chr3 . exon 685648 685718 . - . ID=Thaps3331.3;Parent=Thaps3331;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 685754 689292 . - 0 ID=Thaps3331;Parent=Thaps3331;rank=2 chr3 . exon 685754 689292 . - . ID=Thaps3331.2;Parent=Thaps3331;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 689396 689544 . - 0 ID=Thaps3331;Parent=Thaps3331;rank=1 chr3 ensembl protein_coding_gene 690064 693815 . + . ID=Thaps21697;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXH5];external_name=Thaps21697;logic_name=jgi_thaps3 chr3 ensembl transcript 690064 693815 . + . ID=Thaps21697;Parent=Thaps21697;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 690064 693669 . + 0 ID=Thaps21697;Parent=Thaps21697;rank=1 chr3 . exon 690064 693669 . + . ID=Thaps21697.1;Parent=Thaps21697;constitutive=1;rank=1 chr3 . CDS 693759 693815 . + 0 ID=Thaps21697;Parent=Thaps21697;rank=2 chr3 . exon 693759 693815 . + . ID=Thaps21697.2;Parent=Thaps21697;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 694102 696465 . - . ID=Thaps21698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXH6];external_name=Thaps21698;logic_name=jgi_thaps3 chr3 ensembl transcript 694102 696465 . - . ID=Thaps21698;Parent=Thaps21698;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 694102 696465 . - 0 ID=Thaps21698;Parent=Thaps21698;rank=1 chr3 . exon 694102 696465 . - . ID=Thaps21698.1;Parent=Thaps21698;constitutive=1;rank=1 chr3 . exon 689396 689544 . - . ID=Thaps3331.1;Parent=Thaps3331;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . repeat_region 704413 704496 . ? . description=trf chr3 . repeat_region 704423 704483 . ? . description=dust chr3 . repeat_region 704874 704881 . ? . description=dust chr3 . repeat_region 704913 704959 . ? . description=trf chr3 . repeat_region 704913 704959 . ? . description=dust chr3 . biological_region 705080 705082 0.999 + . logic_name=eponine chr3 . repeat_region 705391 705453 . ? . description=dust chr3 . repeat_region 705402 705434 . ? . description=trf chr3 . repeat_region 705591 705619 . ? . description=dust chr3 . repeat_region 705593 705619 . ? . description=trf chr3 ensembl protein_coding_gene 705049 706689 . + . ID=Thaps21700;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXH8];external_name=Thaps21700;logic_name=jgi_thaps3 chr3 ensembl transcript 705049 706689 . + . ID=Thaps21700;Parent=Thaps21700;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 705049 705823 . + 0 ID=Thaps21700;Parent=Thaps21700;rank=1 chr3 . exon 705049 705823 . + . ID=Thaps21700.1;Parent=Thaps21700;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 705922 706548 . + 0 ID=Thaps21700;Parent=Thaps21700;rank=2 chr3 . exon 705922 706548 . + . ID=Thaps21700.2;Parent=Thaps21700;constitutive=1;rank=2 chr3 . CDS 706592 706689 . + 0 ID=Thaps21700;Parent=Thaps21700;rank=3 chr3 . exon 706592 706689 . + . ID=Thaps21700.3;Parent=Thaps21700;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 699848 704146 . - . ID=Thaps268454;biotype=protein_coding;description=Cyclic nucleotide-activated ion channel [Source:UniProtKB/TrEMBL%3BAcc:B8BXH7];external_name=Thaps268454;logic_name=jgi_thaps3 chr3 ensembl transcript 699848 704146 . - . ID=Thaps268454;Parent=Thaps268454;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 699848 700591 . - 0 ID=Thaps268454;Parent=Thaps268454;rank=4 chr3 . exon 699848 700591 . - . ID=Thaps268454.4;Parent=Thaps268454;constitutive=1;rank=4 chr3 . CDS 702017 702424 . - 0 ID=Thaps268454;Parent=Thaps268454;rank=3 chr3 . exon 702017 702424 . - . ID=Thaps268454.3;Parent=Thaps268454;constitutive=1;rank=3 chr3 . CDS 702665 703378 . - 0 ID=Thaps268454;Parent=Thaps268454;rank=2 chr3 . exon 702665 703378 . - . ID=Thaps268454.2;Parent=Thaps268454;constitutive=1;rank=2 chr3 . CDS 703466 704146 . - 0 ID=Thaps268454;Parent=Thaps268454;rank=1 chr3 . exon 703466 704146 . - . ID=Thaps268454.1;Parent=Thaps268454;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 707087 708424 . - . ID=Thaps32933;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXH9];external_name=Thaps32933;logic_name=jgi_thaps3 chr3 ensembl transcript 707087 708424 . - . ID=Thaps32933;Parent=Thaps32933;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 707087 707673 . - 0 ID=Thaps32933;Parent=Thaps32933;rank=2 chr3 . exon 707087 707673 . - . ID=Thaps32933.2;Parent=Thaps32933;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 707857 708424 . - 0 ID=Thaps32933;Parent=Thaps32933;rank=1 chr3 . repeat_region 711878 711934 . - . description=Copia9LTR_TP chr3 ensembl protein_coding_gene 709197 709361 . - . ID=Thaps20335;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXI0];external_name=Thaps20335;logic_name=jgi_thaps3 chr3 ensembl transcript 709197 709361 . - . ID=Thaps20335;Parent=Thaps20335;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 709197 709361 . - 0 ID=Thaps20335;Parent=Thaps20335;rank=1 chr3 . exon 709197 709361 . - . ID=Thaps20335.1;Parent=Thaps20335;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 714810 718932 . - . ID=Thaps268455;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXI2];external_name=Thaps268455;logic_name=jgi_thaps3 chr3 ensembl transcript 714810 718932 . - . ID=Thaps268455;Parent=Thaps268455;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 714810 716225 . - 0 ID=Thaps268455;Parent=Thaps268455;rank=6 chr3 . exon 714810 716225 . - . ID=Thaps268455.6;Parent=Thaps268455;constitutive=1;rank=6 chr3 . CDS 716320 716490 . - 0 ID=Thaps268455;Parent=Thaps268455;rank=5 chr3 . exon 716320 716490 . - . ID=Thaps268455.5;Parent=Thaps268455;constitutive=1;rank=5 chr3 . CDS 716563 717054 . - 0 ID=Thaps268455;Parent=Thaps268455;rank=4 chr3 . exon 716563 717054 . - . ID=Thaps268455.4;Parent=Thaps268455;constitutive=1;rank=4 chr3 . CDS 717268 717480 . - 0 ID=Thaps268455;Parent=Thaps268455;rank=3 chr3 . CDS 717526 718161 . - 0 ID=Thaps268455;Parent=Thaps268455;rank=2 chr3 . CDS 718192 718932 . - 0 ID=Thaps268455;Parent=Thaps268455;rank=1 chr3 . exon 707857 708424 . - . ID=Thaps32933.1;Parent=Thaps32933;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 710331 710996 . + . ID=Thaps33231;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXI1];external_name=Thaps33231;logic_name=jgi_thaps3 chr3 ensembl transcript 710331 710996 . + . ID=Thaps33231;Parent=Thaps33231;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 710331 710996 . + 0 ID=Thaps33231;Parent=Thaps33231;rank=1 chr3 . exon 710331 710996 . + . ID=Thaps33231.1;Parent=Thaps33231;constitutive=1;rank=1 chr3 . repeat_region 725177 725184 . ? . description=dust chr3 . exon 717268 717480 . - . ID=Thaps268455.3;Parent=Thaps268455;constitutive=1;rank=3 chr3 . exon 717526 718161 . - . ID=Thaps268455.2;Parent=Thaps268455;constitutive=1;rank=2 chr3 . exon 718192 718932 . - . ID=Thaps268455.1;Parent=Thaps268455;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 724710 725210 . + . ID=Thaps3341;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXI3];external_name=Thaps3341;logic_name=jgi_thaps3 chr3 ensembl transcript 724710 725210 . + . ID=Thaps3341;Parent=Thaps3341;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 724710 725210 . + 0 ID=Thaps3341;Parent=Thaps3341;rank=1 chr3 . exon 724710 725210 . + . ID=Thaps3341.1;Parent=Thaps3341;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 725551 727043 . - . ID=Thaps39847;biotype=protein_coding;description=Clathrin adaptor complex subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BXI4];external_name=APM2;logic_name=jgi_thaps3 chr3 ensembl transcript 725551 727043 . - . ID=Thaps39847;Parent=Thaps39847;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 725551 725950 . - 0 ID=Thaps39847;Parent=Thaps39847;rank=3 chr3 . exon 725551 725950 . - . ID=Thaps39847.3;Parent=Thaps39847;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 726028 726803 . - 0 ID=Thaps39847;Parent=Thaps39847;rank=2 chr3 . exon 726028 726803 . - . ID=Thaps39847.2;Parent=Thaps39847;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 726939 727043 . - 0 ID=Thaps39847;Parent=Thaps39847;rank=1 chr3 . exon 726939 727043 . - . ID=Thaps39847.1;Parent=Thaps39847;constitutive=1;rank=1 chr3 . repeat_region 731933 731966 . ? . description=trf chr3 ensembl protein_coding_gene 727454 729691 . - . ID=Thaps21705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXI5];external_name=Thaps21705;logic_name=jgi_thaps3 chr3 ensembl transcript 727454 729691 . - . ID=Thaps21705;Parent=Thaps21705;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 727454 729691 . - 0 ID=Thaps21705;Parent=Thaps21705;rank=1 chr3 . exon 727454 729691 . - . ID=Thaps21705.1;Parent=Thaps21705;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 730855 731799 . - . ID=Thaps3344;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXI6];external_name=Thaps3344;logic_name=jgi_thaps3 chr3 ensembl transcript 730855 731799 . - . ID=Thaps3344;Parent=Thaps3344;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 730855 731799 . - 0 ID=Thaps3344;Parent=Thaps3344;rank=1 chr3 . exon 730855 731799 . - . ID=Thaps3344.1;Parent=Thaps3344;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 732293 732799 . + . ID=Thaps3345;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXI7];external_name=Thaps3345;logic_name=jgi_thaps3 chr3 ensembl transcript 732293 732799 . + . ID=Thaps3345;Parent=Thaps3345;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 732293 732799 . + 0 ID=Thaps3345;Parent=Thaps3345;rank=1 chr3 . exon 732293 732799 . + . ID=Thaps3345.1;Parent=Thaps3345;constitutive=1;rank=1 chr3 . repeat_region 738044 738063 . ? . description=dust chr3 . repeat_region 745304 745337 . - . description=MuDR1_TP chr3 . repeat_region 746505 746529 . ? . description=dust chr3 ensembl protein_coding_gene 739223 740434 . - . ID=Thaps21706;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXI9];external_name=Thaps21706;logic_name=jgi_thaps3 chr3 ensembl transcript 739223 740434 . - . ID=Thaps21706;Parent=Thaps21706;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 739223 740434 . - 0 ID=Thaps21706;Parent=Thaps21706;rank=1 chr3 . exon 739223 740434 . - . ID=Thaps21706.1;Parent=Thaps21706;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 743569 744777 . - . ID=Thaps21707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ2];external_name=Thaps21707;logic_name=jgi_thaps3 chr3 ensembl transcript 743569 744777 . - . ID=Thaps21707;Parent=Thaps21707;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 743569 744777 . - 0 ID=Thaps21707;Parent=Thaps21707;rank=1 chr3 . exon 743569 744777 . - . ID=Thaps21707.1;Parent=Thaps21707;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 738518 739182 . + . ID=Thaps261744;biotype=protein_coding;description=Adenylate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BXI8];external_name=Thaps261744;logic_name=jgi_thaps3 chr3 ensembl transcript 738518 739182 . + . ID=Thaps261744;Parent=Thaps261744;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 738518 739182 . + 0 ID=Thaps261744;Parent=Thaps261744;rank=1 chr3 . exon 738518 739182 . + . ID=Thaps261744.1;Parent=Thaps261744;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 740879 741433 . + . ID=Thaps3348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ0];external_name=Thaps3348;logic_name=jgi_thaps3 chr3 ensembl transcript 740879 741433 . + . ID=Thaps3348;Parent=Thaps3348;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 740879 741090 . + 0 ID=Thaps3348;Parent=Thaps3348;rank=1 chr3 . exon 740879 741090 . + . ID=Thaps3348.1;Parent=Thaps3348;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 741160 741433 . + 0 ID=Thaps3348;Parent=Thaps3348;rank=2 chr3 . exon 741160 741433 . + . ID=Thaps3348.2;Parent=Thaps3348;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 741770 743066 . + . ID=Thaps3349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ1];external_name=Thaps3349;logic_name=jgi_thaps3 chr3 ensembl transcript 741770 743066 . + . ID=Thaps3349;Parent=Thaps3349;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 741770 742401 . + 0 ID=Thaps3349;Parent=Thaps3349;rank=1 chr3 . exon 741770 742401 . + . ID=Thaps3349.1;Parent=Thaps3349;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 742521 742963 . + 0 ID=Thaps3349;Parent=Thaps3349;rank=2 chr3 . exon 742521 742963 . + . ID=Thaps3349.2;Parent=Thaps3349;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 742996 743066 . + 0 ID=Thaps3349;Parent=Thaps3349;rank=3 chr3 . exon 742996 743066 . + . ID=Thaps3349.3;Parent=Thaps3349;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . repeat_region 751779 751812 . ? . description=trf chr3 ensembl protein_coding_gene 747051 748085 . - . ID=Thaps21708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ3];external_name=Thaps21708;logic_name=jgi_thaps3 chr3 ensembl transcript 747051 748085 . - . ID=Thaps21708;Parent=Thaps21708;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 747051 748085 . - 0 ID=Thaps21708;Parent=Thaps21708;rank=1 chr3 . exon 747051 748085 . - . ID=Thaps21708.1;Parent=Thaps21708;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 749329 751270 . - . ID=Thaps21709;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ4];external_name=Thaps21709;logic_name=jgi_thaps3 chr3 ensembl transcript 749329 751270 . - . ID=Thaps21709;Parent=Thaps21709;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 749329 750492 . - 0 ID=Thaps21709;Parent=Thaps21709;rank=2 chr3 . exon 749329 750492 . - . ID=Thaps21709.2;Parent=Thaps21709;constitutive=1;rank=2 chr3 . CDS 750590 751270 . - 0 ID=Thaps21709;Parent=Thaps21709;rank=1 chr3 . exon 750590 751270 . - . ID=Thaps21709.1;Parent=Thaps21709;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 755957 757378 . + . ID=Thaps21710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ7];external_name=Thaps21710;logic_name=jgi_thaps3 chr3 ensembl transcript 755957 757378 . + . ID=Thaps21710;Parent=Thaps21710;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 755957 756304 . + 0 ID=Thaps21710;Parent=Thaps21710;rank=1 chr3 . exon 755957 756304 . + . ID=Thaps21710.1;Parent=Thaps21710;constitutive=1;rank=1 chr3 . CDS 756444 757067 . + 0 ID=Thaps21710;Parent=Thaps21710;rank=2 chr3 . exon 756444 757067 . + . ID=Thaps21710.2;Parent=Thaps21710;constitutive=1;rank=2 chr3 . CDS 757151 757378 . + 0 ID=Thaps21710;Parent=Thaps21710;rank=3 chr3 ensembl protein_coding_gene 752234 753767 . + . ID=Thaps3353;biotype=protein_coding;description=L-lactate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ5];external_name=Thaps3353;logic_name=jgi_thaps3 chr3 ensembl transcript 752234 753767 . + . ID=Thaps3353;Parent=Thaps3353;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 752234 752383 . + 0 ID=Thaps3353;Parent=Thaps3353;rank=1 chr3 . exon 752234 752383 . + . ID=Thaps3353.1;Parent=Thaps3353;constitutive=1;rank=1 chr3 . CDS 752622 753767 . + 0 ID=Thaps3353;Parent=Thaps3353;rank=2 chr3 . exon 752622 753767 . + . ID=Thaps3353.2;Parent=Thaps3353;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 753982 755287 . - . ID=Thaps3354;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ6];external_name=Thaps3354;logic_name=jgi_thaps3 chr3 ensembl transcript 753982 755287 . - . ID=Thaps3354;Parent=Thaps3354;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 753982 754025 . - 0 ID=Thaps3354;Parent=Thaps3354;rank=2 chr3 . exon 753982 754025 . - . ID=Thaps3354.2;Parent=Thaps3354;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 754078 755287 . - 0 ID=Thaps3354;Parent=Thaps3354;rank=1 chr3 . exon 754078 755287 . - . ID=Thaps3354.1;Parent=Thaps3354;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . exon 757151 757378 . + . ID=Thaps21710.3;Parent=Thaps21710;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 765306 768241 . - . ID=Thaps21712;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXK1];external_name=Thaps21712;logic_name=jgi_thaps3 chr3 ensembl transcript 765306 768241 . - . ID=Thaps21712;Parent=Thaps21712;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 765306 766755 . - 0 ID=Thaps21712;Parent=Thaps21712;rank=2 chr3 . exon 765306 766755 . - . ID=Thaps21712.2;Parent=Thaps21712;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 766818 768241 . - 0 ID=Thaps21712;Parent=Thaps21712;rank=1 chr3 . exon 766818 768241 . - . ID=Thaps21712.1;Parent=Thaps21712;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 760303 761595 . - . ID=Thaps261746;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ8];external_name=Thaps261746;logic_name=jgi_thaps3 chr3 ensembl transcript 760303 761595 . - . ID=Thaps261746;Parent=Thaps261746;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 760303 760843 . - 0 ID=Thaps261746;Parent=Thaps261746;rank=3 chr3 . exon 760303 760843 . - . ID=Thaps261746.3;Parent=Thaps261746;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 760955 761453 . - 0 ID=Thaps261746;Parent=Thaps261746;rank=2 chr3 . exon 760955 761453 . - . ID=Thaps261746.2;Parent=Thaps261746;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 761484 761595 . - 0 ID=Thaps261746;Parent=Thaps261746;rank=1 chr3 . exon 761484 761595 . - . ID=Thaps261746.1;Parent=Thaps261746;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 761937 762138 . - . ID=Thaps261747;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXJ9];external_name=Thaps261747;logic_name=jgi_thaps3 chr3 ensembl transcript 761937 762138 . - . ID=Thaps261747;Parent=Thaps261747;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 761937 762138 . - 0 ID=Thaps261747;Parent=Thaps261747;rank=1 chr3 . exon 761937 762138 . - . ID=Thaps261747.1;Parent=Thaps261747;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 767322 767343 . ? . description=trf chr3 . repeat_region 767322 767343 . ? . description=dust chr3 . repeat_region 767921 767966 . ? . description=dust chr3 . repeat_region 767986 768046 . ? . description=dust chr3 . repeat_region 768379 768388 . ? . description=dust chr3 . repeat_region 772791 772799 . ? . description=dust chr3 . repeat_region 776501 776715 . ? . description=trf chr3 . repeat_region 776501 776760 . ? . description=trf chr3 ensembl protein_coding_gene 772838 774472 . + . ID=Thaps21713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXK3];external_name=Thaps21713;logic_name=jgi_thaps3 chr3 ensembl transcript 772838 774472 . + . ID=Thaps21713;Parent=Thaps21713;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 772838 774472 . + 0 ID=Thaps21713;Parent=Thaps21713;rank=1 chr3 . exon 772838 774472 . + . ID=Thaps21713.1;Parent=Thaps21713;constitutive=1;rank=1 chr3 ensembl gene 769131 771094 . + . ID=Thaps261748;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 769131 771094 . + . ID=Thaps261748;Parent=Thaps261748;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 769131 769296 . + . ID=Thaps261748.1;Parent=Thaps261748;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . exon 769318 769499 . + . ID=Thaps261748.2;Parent=Thaps261748;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 769584 769717 . + . ID=Thaps261748.3;Parent=Thaps261748;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . exon 769819 770001 . + . ID=Thaps261748.4;Parent=Thaps261748;constitutive=1;rank=4 chr3 . exon 770101 770138 . + . ID=Thaps261748.5;Parent=Thaps261748;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . exon 770525 770681 . + . ID=Thaps261748.6;Parent=Thaps261748;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . exon 770766 770793 . + . ID=Thaps261748.7;Parent=Thaps261748;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . exon 770824 771094 . + . ID=Thaps261748.8;Parent=Thaps261748;constitutive=1;ensembl_end_phase=1;rank=8 chr3 ensembl protein_coding_gene 771894 772625 . - . ID=Thaps3359;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXK2];external_name=Thaps3359;logic_name=jgi_thaps3 chr3 ensembl transcript 771894 772625 . - . ID=Thaps3359;Parent=Thaps3359;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 771894 772625 . - 0 ID=Thaps3359;Parent=Thaps3359;rank=1 chr3 . exon 771894 772625 . - . ID=Thaps3359.1;Parent=Thaps3359;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 774917 778096 . + . ID=Thaps3361;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXK4];external_name=Thaps3361;logic_name=jgi_thaps3 chr3 ensembl transcript 774917 778096 . + . ID=Thaps3361;Parent=Thaps3361;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 774917 778096 . + 0 ID=Thaps3361;Parent=Thaps3361;rank=1 chr3 . exon 774917 778096 . + . ID=Thaps3361.1;Parent=Thaps3361;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 782641 784845 . - . ID=Thaps21715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXK5];external_name=Thaps21715;logic_name=jgi_thaps3 chr3 ensembl transcript 782641 784845 . - . ID=Thaps21715;Parent=Thaps21715;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 782641 783438 . - 0 ID=Thaps21715;Parent=Thaps21715;rank=4 chr3 . exon 782641 783438 . - . ID=Thaps21715.4;Parent=Thaps21715;constitutive=1;rank=4 chr3 . CDS 783511 784116 . - 0 ID=Thaps21715;Parent=Thaps21715;rank=3 chr3 . exon 783511 784116 . - . ID=Thaps21715.3;Parent=Thaps21715;constitutive=1;rank=3 chr3 . CDS 784318 784434 . - 0 ID=Thaps21715;Parent=Thaps21715;rank=2 chr3 . exon 784318 784434 . - . ID=Thaps21715.2;Parent=Thaps21715;constitutive=1;rank=2 chr3 . CDS 784525 784845 . - 0 ID=Thaps21715;Parent=Thaps21715;rank=1 chr3 . exon 784525 784845 . - . ID=Thaps21715.1;Parent=Thaps21715;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 786419 790239 . + . ID=Thaps268458;biotype=protein_coding;description=Calcium transporting ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8BXK6];external_name=Thaps268458;logic_name=jgi_thaps3 chr3 ensembl transcript 786419 790239 . + . ID=Thaps268458;Parent=Thaps268458;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 786419 786533 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=1 chr3 . exon 786419 786533 . + . ID=Thaps268458.1;Parent=Thaps268458;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 786756 786877 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=2 chr3 . exon 786756 786877 . + . ID=Thaps268458.2;Parent=Thaps268458;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 786938 787156 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=3 chr3 . CDS 787208 787303 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=4 chr3 . CDS 787377 787739 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=5 chr3 . CDS 787817 788041 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=6 chr3 . CDS 788063 788486 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=7 chr3 . CDS 788514 788587 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=8 chr3 . CDS 788657 789030 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=9 chr3 . CDS 789107 789239 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=10 chr3 . CDS 789317 789564 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=11 chr3 . CDS 789639 790008 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=12 chr3 . CDS 790102 790239 . + 0 ID=Thaps268458;Parent=Thaps268458;rank=13 chr3 ensembl protein_coding_gene 794360 796960 . + . ID=Thaps21718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXK8];external_name=Thaps21718;logic_name=jgi_thaps3 chr3 ensembl transcript 794360 796960 . + . ID=Thaps21718;Parent=Thaps21718;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 794360 796273 . + 0 ID=Thaps21718;Parent=Thaps21718;rank=1 chr3 . exon 794360 796273 . + . ID=Thaps21718.1;Parent=Thaps21718;constitutive=1;rank=1 chr3 . CDS 796361 796960 . + 0 ID=Thaps21718;Parent=Thaps21718;rank=2 chr3 . exon 796361 796960 . + . ID=Thaps21718.2;Parent=Thaps21718;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 792112 793445 . - . ID=Thaps261750;biotype=protein_coding;description=Hydroxypyruvate reductase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXK7];external_name=Thaps261750;logic_name=jgi_thaps3 chr3 ensembl transcript 792112 793445 . - . ID=Thaps261750;Parent=Thaps261750;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 792112 792302 . - 0 ID=Thaps261750;Parent=Thaps261750;rank=3 chr3 . exon 792112 792302 . - . ID=Thaps261750.3;Parent=Thaps261750;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 792389 792835 . - 0 ID=Thaps261750;Parent=Thaps261750;rank=2 chr3 . exon 792389 792835 . - . ID=Thaps261750.2;Parent=Thaps261750;constitutive=1;rank=2 chr3 . CDS 792902 793445 . - 0 ID=Thaps261750;Parent=Thaps261750;rank=1 chr3 . exon 792902 793445 . - . ID=Thaps261750.1;Parent=Thaps261750;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . exon 786938 787156 . + . ID=Thaps268458.3;Parent=Thaps268458;constitutive=1;rank=3 chr3 . exon 787208 787303 . + . ID=Thaps268458.4;Parent=Thaps268458;constitutive=1;rank=4 chr3 . exon 787377 787739 . + . ID=Thaps268458.5;Parent=Thaps268458;constitutive=1;rank=5 chr3 . exon 787817 788041 . + . ID=Thaps268458.6;Parent=Thaps268458;constitutive=1;rank=6 chr3 . exon 788063 788486 . + . ID=Thaps268458.7;Parent=Thaps268458;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . exon 788514 788587 . + . ID=Thaps268458.8;Parent=Thaps268458;constitutive=1;ensembl_end_phase=2;rank=8 chr3 . exon 788657 789030 . + . ID=Thaps268458.9;Parent=Thaps268458;constitutive=1;ensembl_end_phase=2;rank=9 chr3 . exon 789107 789239 . + . ID=Thaps268458.10;Parent=Thaps268458;constitutive=1;ensembl_end_phase=1;rank=10 chr3 . exon 789317 789564 . + . ID=Thaps268458.11;Parent=Thaps268458;constitutive=1;ensembl_end_phase=2;rank=11 chr3 . exon 789639 790008 . + . ID=Thaps268458.12;Parent=Thaps268458;constitutive=1;ensembl_end_phase=1;rank=12 chr3 . exon 790102 790239 . + . ID=Thaps268458.13;Parent=Thaps268458;constitutive=1;rank=13 chr3 . repeat_region 800422 800429 . ? . description=dust chr3 . repeat_region 800824 800831 . ? . description=dust chr3 ensembl protein_coding_gene 797167 797883 . + . ID=Thaps21719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXK9];external_name=Thaps21719;logic_name=jgi_thaps3 chr3 ensembl transcript 797167 797883 . + . ID=Thaps21719;Parent=Thaps21719;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 797167 797341 . + 0 ID=Thaps21719;Parent=Thaps21719;rank=1 chr3 . exon 797167 797341 . + . ID=Thaps21719.1;Parent=Thaps21719;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 797432 797883 . + 0 ID=Thaps21719;Parent=Thaps21719;rank=2 chr3 . exon 797432 797883 . + . ID=Thaps21719.2;Parent=Thaps21719;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 798091 800633 . - . ID=Thaps21720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXL0];external_name=Thaps21720;logic_name=jgi_thaps3 chr3 ensembl transcript 798091 800633 . - . ID=Thaps21720;Parent=Thaps21720;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 798091 798739 . - 0 ID=Thaps21720;Parent=Thaps21720;rank=5 chr3 . exon 798091 798739 . - . ID=Thaps21720.5;Parent=Thaps21720;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 798817 799476 . - 0 ID=Thaps21720;Parent=Thaps21720;rank=4 chr3 . exon 798817 799476 . - . ID=Thaps21720.4;Parent=Thaps21720;constitutive=1;rank=4 chr3 . CDS 799560 800076 . - 0 ID=Thaps21720;Parent=Thaps21720;rank=3 chr3 . exon 799560 800076 . - . ID=Thaps21720.3;Parent=Thaps21720;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 800182 800253 . - 0 ID=Thaps21720;Parent=Thaps21720;rank=2 chr3 . exon 800182 800253 . - . ID=Thaps21720.2;Parent=Thaps21720;constitutive=1;rank=2 chr3 . CDS 800396 800633 . - 0 ID=Thaps21720;Parent=Thaps21720;rank=1 chr3 . exon 800396 800633 . - . ID=Thaps21720.1;Parent=Thaps21720;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 801305 804979 . + . ID=Thaps268460;biotype=protein_coding;description=REV1 protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXL1];external_name=Thaps268460;logic_name=jgi_thaps3 chr3 ensembl transcript 801305 804979 . + . ID=Thaps268460;Parent=Thaps268460;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 801305 802566 . + 0 ID=Thaps268460;Parent=Thaps268460;rank=1 chr3 . exon 801305 802566 . + . ID=Thaps268460.1;Parent=Thaps268460;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 802652 803270 . + 0 ID=Thaps268460;Parent=Thaps268460;rank=2 chr3 . exon 802652 803270 . + . ID=Thaps268460.2;Parent=Thaps268460;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 803341 803812 . + 0 ID=Thaps268460;Parent=Thaps268460;rank=3 chr3 . exon 803341 803812 . + . ID=Thaps268460.3;Parent=Thaps268460;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 803886 804979 . + 0 ID=Thaps268460;Parent=Thaps268460;rank=4 chr3 . exon 803886 804979 . + . ID=Thaps268460.4;Parent=Thaps268460;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 805135 806793 . - . ID=Thaps3370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXL2];external_name=Thaps3370;logic_name=jgi_thaps3 chr3 ensembl transcript 805135 806793 . - . ID=Thaps3370;Parent=Thaps3370;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 805135 805500 . - 0 ID=Thaps3370;Parent=Thaps3370;rank=3 chr3 . exon 805135 805500 . - . ID=Thaps3370.3;Parent=Thaps3370;constitutive=1;rank=3 chr3 . CDS 805588 806605 . - 0 ID=Thaps3370;Parent=Thaps3370;rank=2 chr3 . exon 805588 806605 . - . ID=Thaps3370.2;Parent=Thaps3370;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 806726 806793 . - 0 ID=Thaps3370;Parent=Thaps3370;rank=1 chr3 . exon 806726 806793 . - . ID=Thaps3370.1;Parent=Thaps3370;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 807519 809406 . + . ID=Thaps13551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXL3];external_name=Thaps13551;logic_name=jgi_thaps3 chr3 ensembl transcript 807519 809406 . + . ID=Thaps13551;Parent=Thaps13551;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 807519 807596 . + 0 ID=Thaps13551;Parent=Thaps13551;rank=1 chr3 . exon 807519 807596 . + . ID=Thaps13551.1;Parent=Thaps13551;constitutive=1;rank=1 chr3 . CDS 807676 808757 . + 0 ID=Thaps13551;Parent=Thaps13551;rank=2 chr3 . exon 807676 808757 . + . ID=Thaps13551.2;Parent=Thaps13551;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 808842 809406 . + 0 ID=Thaps13551;Parent=Thaps13551;rank=3 chr3 . exon 808842 809406 . + . ID=Thaps13551.3;Parent=Thaps13551;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 814564 815148 . - . ID=Thaps16796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXL6];external_name=Thaps16796;logic_name=jgi_thaps3 chr3 ensembl transcript 814564 815148 . - . ID=Thaps16796;Parent=Thaps16796;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 814564 815148 . - 0 ID=Thaps16796;Parent=Thaps16796;rank=1 chr3 . exon 814564 815148 . - . ID=Thaps16796.1;Parent=Thaps16796;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 809759 811159 . - . ID=Thaps21722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXL4];external_name=Thaps21722;logic_name=jgi_thaps3 chr3 ensembl transcript 809759 811159 . - . ID=Thaps21722;Parent=Thaps21722;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 809759 811159 . - 0 ID=Thaps21722;Parent=Thaps21722;rank=1 chr3 . exon 809759 811159 . - . ID=Thaps21722.1;Parent=Thaps21722;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 815595 817031 . + . ID=Thaps21723;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXL7];external_name=Thaps21723;logic_name=jgi_thaps3 chr3 ensembl transcript 815595 817031 . + . ID=Thaps21723;Parent=Thaps21723;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 815595 815846 . + 0 ID=Thaps21723;Parent=Thaps21723;rank=1 chr3 . exon 815595 815846 . + . ID=Thaps21723.1;Parent=Thaps21723;constitutive=1;rank=1 chr3 . CDS 815988 817031 . + 0 ID=Thaps21723;Parent=Thaps21723;rank=2 chr3 . exon 815988 817031 . + . ID=Thaps21723.2;Parent=Thaps21723;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 811895 813586 . + . ID=Thaps261754;biotype=protein_coding;description=Sulfate permease [Source:UniProtKB/TrEMBL%3BAcc:B8BXL5];external_name=Thaps261754;logic_name=jgi_thaps3 chr3 ensembl transcript 811895 813586 . + . ID=Thaps261754;Parent=Thaps261754;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 811895 811979 . + 0 ID=Thaps261754;Parent=Thaps261754;rank=1 chr3 . exon 811895 811979 . + . ID=Thaps261754.1;Parent=Thaps261754;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 812067 812691 . + 0 ID=Thaps261754;Parent=Thaps261754;rank=2 chr3 . exon 812067 812691 . + . ID=Thaps261754.2;Parent=Thaps261754;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 812722 813586 . + 0 ID=Thaps261754;Parent=Thaps261754;rank=3 chr3 . exon 812722 813586 . + . ID=Thaps261754.3;Parent=Thaps261754;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . repeat_region 822823 822830 . ? . description=dust chr3 ensembl protein_coding_gene 819831 822516 . + . ID=Thaps261756;biotype=protein_coding;description=Membrane alanine aminopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8BXM0];external_name=Thaps261756;logic_name=jgi_thaps3 chr3 ensembl transcript 819831 822516 . + . ID=Thaps261756;Parent=Thaps261756;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 819831 819984 . + 0 ID=Thaps261756;Parent=Thaps261756;rank=1 chr3 . exon 819831 819984 . + . ID=Thaps261756.1;Parent=Thaps261756;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 820000 822516 . + 0 ID=Thaps261756;Parent=Thaps261756;rank=2 chr3 . exon 820000 822516 . + . ID=Thaps261756.2;Parent=Thaps261756;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 824758 825891 . + . ID=Thaps268461;biotype=protein_coding;description=Ornithine cyclodeaminase [Source:UniProtKB/TrEMBL%3BAcc:B8BXM3];external_name=Thaps268461;logic_name=jgi_thaps3 chr3 ensembl transcript 824758 825891 . + . ID=Thaps268461;Parent=Thaps268461;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 824758 824951 . + 0 ID=Thaps268461;Parent=Thaps268461;rank=1 chr3 . exon 824758 824951 . + . ID=Thaps268461.1;Parent=Thaps268461;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 825021 825420 . + 0 ID=Thaps268461;Parent=Thaps268461;rank=2 chr3 . exon 825021 825420 . + . ID=Thaps268461.2;Parent=Thaps268461;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 825457 825891 . + 0 ID=Thaps268461;Parent=Thaps268461;rank=3 chr3 . exon 825457 825891 . + . ID=Thaps268461.3;Parent=Thaps268461;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 818780 819319 . - . ID=Thaps32795;biotype=protein_coding;description=ADP ribosylation factor-like protein 2 [Source:UniProtKB/TrEMBL%3BAcc:B8BXL9];external_name=Thaps32795;logic_name=jgi_thaps3 chr3 ensembl transcript 818780 819319 . - . ID=Thaps32795;Parent=Thaps32795;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 818780 819319 . - 0 ID=Thaps32795;Parent=Thaps32795;rank=1 chr3 . exon 818780 819319 . - . ID=Thaps32795.1;Parent=Thaps32795;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 817089 818459 . - . ID=Thaps3375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXL8];external_name=Thaps3375;logic_name=jgi_thaps3 chr3 ensembl transcript 817089 818459 . - . ID=Thaps3375;Parent=Thaps3375;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 817089 818459 . - 0 ID=Thaps3375;Parent=Thaps3375;rank=1 chr3 . exon 817089 818459 . - . ID=Thaps3375.1;Parent=Thaps3375;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 822848 823495 . + . ID=Thaps3378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXM1];external_name=Thaps3378;logic_name=jgi_thaps3 chr3 ensembl transcript 822848 823495 . + . ID=Thaps3378;Parent=Thaps3378;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 822848 823495 . + 0 ID=Thaps3378;Parent=Thaps3378;rank=1 chr3 . exon 822848 823495 . + . ID=Thaps3378.1;Parent=Thaps3378;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 823803 824551 . - . ID=Thaps3379;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXM2];external_name=Thaps3379;logic_name=jgi_thaps3 chr3 ensembl transcript 823803 824551 . - . ID=Thaps3379;Parent=Thaps3379;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 823803 824114 . - 0 ID=Thaps3379;Parent=Thaps3379;rank=2 chr3 . exon 823803 824114 . - . ID=Thaps3379.2;Parent=Thaps3379;constitutive=1;rank=2 chr3 . CDS 824270 824551 . - 0 ID=Thaps3379;Parent=Thaps3379;rank=1 chr3 . exon 824270 824551 . - . ID=Thaps3379.1;Parent=Thaps3379;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 827175 828326 . - . ID=Thaps21725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXM4];external_name=Thaps21725;logic_name=jgi_thaps3 chr3 ensembl transcript 827175 828326 . - . ID=Thaps21725;Parent=Thaps21725;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 827175 827483 . - 0 ID=Thaps21725;Parent=Thaps21725;rank=2 chr3 . exon 827175 827483 . - . ID=Thaps21725.2;Parent=Thaps21725;constitutive=1;rank=2 chr3 . CDS 827577 828326 . - 0 ID=Thaps21725;Parent=Thaps21725;rank=1 chr3 . exon 827577 828326 . - . ID=Thaps21725.1;Parent=Thaps21725;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 833391 834536 . - . ID=Thaps21726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXM8];external_name=Thaps21726;logic_name=jgi_thaps3 chr3 ensembl transcript 833391 834536 . - . ID=Thaps21726;Parent=Thaps21726;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 833391 833650 . - 0 ID=Thaps21726;Parent=Thaps21726;rank=4 chr3 . exon 833391 833650 . - . ID=Thaps21726.4;Parent=Thaps21726;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 833731 833910 . - 0 ID=Thaps21726;Parent=Thaps21726;rank=3 chr3 . exon 833731 833910 . - . ID=Thaps21726.3;Parent=Thaps21726;constitutive=1;rank=3 chr3 . CDS 834003 834177 . - 0 ID=Thaps21726;Parent=Thaps21726;rank=2 chr3 . exon 834003 834177 . - . ID=Thaps21726.2;Parent=Thaps21726;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 834372 834536 . - 0 ID=Thaps21726;Parent=Thaps21726;rank=1 chr3 . exon 834372 834536 . - . ID=Thaps21726.1;Parent=Thaps21726;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 834801 840459 . + . ID=Thaps21727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXM9];external_name=Thaps21727;logic_name=jgi_thaps3 chr3 ensembl transcript 834801 840459 . + . ID=Thaps21727;Parent=Thaps21727;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 834801 835014 . + 0 ID=Thaps21727;Parent=Thaps21727;rank=1 chr3 . exon 834801 835014 . + . ID=Thaps21727.1;Parent=Thaps21727;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 835191 838749 . + 0 ID=Thaps21727;Parent=Thaps21727;rank=2 chr3 . exon 835191 838749 . + . ID=Thaps21727.2;Parent=Thaps21727;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 838831 839587 . + 0 ID=Thaps21727;Parent=Thaps21727;rank=3 chr3 . CDS 839671 840459 . + 0 ID=Thaps21727;Parent=Thaps21727;rank=4 chr3 ensembl protein_coding_gene 829021 829464 . + . ID=Thaps32675;biotype=protein_coding;description=RS15B%2C ribosomal protein 15B 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BXM5];external_name=RS15B;logic_name=jgi_thaps3 chr3 ensembl transcript 829021 829464 . + . ID=Thaps32675;Parent=Thaps32675;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 829021 829464 . + 0 ID=Thaps32675;Parent=Thaps32675;rank=1 chr3 . exon 829021 829464 . + . ID=Thaps32675.1;Parent=Thaps32675;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 829576 831639 . - . ID=Thaps3383;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXM6];external_name=Thaps3383;logic_name=jgi_thaps3 chr3 ensembl transcript 829576 831639 . - . ID=Thaps3383;Parent=Thaps3383;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 829576 830647 . - 0 ID=Thaps3383;Parent=Thaps3383;rank=2 chr3 . exon 829576 830647 . - . ID=Thaps3383.2;Parent=Thaps3383;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 830726 831639 . - 0 ID=Thaps3383;Parent=Thaps3383;rank=1 chr3 . exon 830726 831639 . - . ID=Thaps3383.1;Parent=Thaps3383;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 831765 833040 . + . ID=Thaps3384;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXM7];external_name=Thaps3384;logic_name=jgi_thaps3 chr3 ensembl transcript 831765 833040 . + . ID=Thaps3384;Parent=Thaps3384;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 831765 832439 . + 0 ID=Thaps3384;Parent=Thaps3384;rank=1 chr3 . exon 831765 832439 . + . ID=Thaps3384.1;Parent=Thaps3384;constitutive=1;rank=1 chr3 . CDS 832528 833040 . + 0 ID=Thaps3384;Parent=Thaps3384;rank=2 chr3 . exon 832528 833040 . + . ID=Thaps3384.2;Parent=Thaps3384;constitutive=1;rank=2 chr3 . repeat_region 839592 839610 . ? . description=dust chr3 . exon 838831 839587 . + . ID=Thaps21727.3;Parent=Thaps21727;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 839671 840459 . + . ID=Thaps21727.4;Parent=Thaps21727;constitutive=1;rank=4 chr3 ensembl protein_coding_gene 844643 845059 . + . ID=Thaps33019;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXN1];external_name=Thaps33019;logic_name=jgi_thaps3 chr3 ensembl transcript 844643 845059 . + . ID=Thaps33019;Parent=Thaps33019;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 844643 845059 . + 0 ID=Thaps33019;Parent=Thaps33019;rank=1 chr3 . exon 844643 845059 . + . ID=Thaps33019.1;Parent=Thaps33019;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 842605 843376 . + . ID=Thaps3387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXN0];external_name=Thaps3387;logic_name=jgi_thaps3 chr3 ensembl transcript 842605 843376 . + . ID=Thaps3387;Parent=Thaps3387;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 842605 842827 . + 0 ID=Thaps3387;Parent=Thaps3387;rank=1 chr3 . exon 842605 842827 . + . ID=Thaps3387.1;Parent=Thaps3387;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 842958 843376 . + 0 ID=Thaps3387;Parent=Thaps3387;rank=2 chr3 . exon 842958 843376 . + . ID=Thaps3387.2;Parent=Thaps3387;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 845676 846412 . + . ID=Thaps3389;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXN2];external_name=Thaps3389;logic_name=jgi_thaps3 chr3 ensembl transcript 845676 846412 . + . ID=Thaps3389;Parent=Thaps3389;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 845676 845729 . + 0 ID=Thaps3389;Parent=Thaps3389;rank=1 chr3 . exon 845676 845729 . + . ID=Thaps3389.1;Parent=Thaps3389;constitutive=1;rank=1 chr3 . CDS 845804 846412 . + 0 ID=Thaps3389;Parent=Thaps3389;rank=2 chr3 . exon 845804 846412 . + . ID=Thaps3389.2;Parent=Thaps3389;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 852533 855712 . + . ID=Thaps21732;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXN6];external_name=Thaps21732;logic_name=jgi_thaps3 chr3 ensembl transcript 852533 855712 . + . ID=Thaps21732;Parent=Thaps21732;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 852533 855712 . + 0 ID=Thaps21732;Parent=Thaps21732;rank=1 chr3 . exon 852533 855712 . + . ID=Thaps21732.1;Parent=Thaps21732;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 855967 860055 . - . ID=Thaps21733;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXN7];external_name=Thaps21733;logic_name=jgi_thaps3 chr3 ensembl transcript 855967 860055 . - . ID=Thaps21733;Parent=Thaps21733;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 855967 856046 . - 0 ID=Thaps21733;Parent=Thaps21733;rank=5 chr3 . exon 855967 856046 . - . ID=Thaps21733.5;Parent=Thaps21733;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 856070 856849 . - 0 ID=Thaps21733;Parent=Thaps21733;rank=4 chr3 . exon 856070 856849 . - . ID=Thaps21733.4;Parent=Thaps21733;constitutive=1;rank=4 chr3 . CDS 856898 859499 . - 0 ID=Thaps21733;Parent=Thaps21733;rank=3 chr3 . CDS 859604 859636 . - 0 ID=Thaps21733;Parent=Thaps21733;rank=2 chr3 . CDS 859756 860055 . - 0 ID=Thaps21733;Parent=Thaps21733;rank=1 chr3 ensembl protein_coding_gene 846788 848326 . - . ID=Thaps27414;biotype=protein_coding;description=Nitrate transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BXN3];external_name=NRT1;logic_name=jgi_thaps3 chr3 ensembl transcript 846788 848326 . - . ID=Thaps27414;Parent=Thaps27414;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 846788 848212 . - 0 ID=Thaps27414;Parent=Thaps27414;rank=2 chr3 . exon 846788 848212 . - . ID=Thaps27414.2;Parent=Thaps27414;constitutive=1;rank=2 chr3 . CDS 848303 848326 . - 0 ID=Thaps27414;Parent=Thaps27414;rank=1 chr3 . exon 848303 848326 . - . ID=Thaps27414.1;Parent=Thaps27414;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 849220 850306 . + . ID=Thaps3393;biotype=protein_coding;description=Formate/nitrite transporter family member [Source:UniProtKB/TrEMBL%3BAcc:B8BXN4];external_name=Thaps3393;logic_name=jgi_thaps3 chr3 ensembl transcript 849220 850306 . + . ID=Thaps3393;Parent=Thaps3393;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 849220 849255 . + 0 ID=Thaps3393;Parent=Thaps3393;rank=1 chr3 . exon 849220 849255 . + . ID=Thaps3393.1;Parent=Thaps3393;constitutive=1;rank=1 chr3 . CDS 849367 849549 . + 0 ID=Thaps3393;Parent=Thaps3393;rank=2 chr3 . exon 849367 849549 . + . ID=Thaps3393.2;Parent=Thaps3393;constitutive=1;rank=2 chr3 . CDS 849632 850066 . + 0 ID=Thaps3393;Parent=Thaps3393;rank=3 chr3 . exon 849632 850066 . + . ID=Thaps3393.3;Parent=Thaps3393;constitutive=1;rank=3 chr3 . CDS 850145 850306 . + 0 ID=Thaps3393;Parent=Thaps3393;rank=4 chr3 . exon 850145 850306 . + . ID=Thaps3393.4;Parent=Thaps3393;constitutive=1;rank=4 chr3 ensembl protein_coding_gene 850555 851537 . + . ID=Thaps3394;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXN5];external_name=Thaps3394;logic_name=jgi_thaps3 chr3 ensembl transcript 850555 851537 . + . ID=Thaps3394;Parent=Thaps3394;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 850555 850789 . + 0 ID=Thaps3394;Parent=Thaps3394;rank=1 chr3 . exon 850555 850789 . + . ID=Thaps3394.1;Parent=Thaps3394;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 850870 851537 . + 0 ID=Thaps3394;Parent=Thaps3394;rank=2 chr3 . exon 850870 851537 . + . ID=Thaps3394.2;Parent=Thaps3394;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . repeat_region 865126 865133 . ? . description=dust chr3 . repeat_region 865304 865337 . ? . description=trf chr3 . repeat_region 865996 866028 . ? . description=trf chr3 ensembl protein_coding_gene 866065 866304 . + . ID=Thaps20420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXP0];external_name=Thaps20420;logic_name=jgi_thaps3 chr3 ensembl transcript 866065 866304 . + . ID=Thaps20420;Parent=Thaps20420;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 866065 866304 . + 0 ID=Thaps20420;Parent=Thaps20420;rank=1 chr3 . exon 866065 866304 . + . ID=Thaps20420.1;Parent=Thaps20420;constitutive=1;rank=1 chr3 . exon 856898 859499 . - . ID=Thaps21733.3;Parent=Thaps21733;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 859604 859636 . - . ID=Thaps21733.2;Parent=Thaps21733;constitutive=1;rank=2 chr3 . exon 859756 860055 . - . ID=Thaps21733.1;Parent=Thaps21733;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 861360 863378 . - . ID=Thaps3397;biotype=protein_coding;description=Electron transfer flavoprotein ubiquinone oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8BXN8];external_name=Thaps3397;logic_name=jgi_thaps3 chr3 ensembl transcript 861360 863378 . - . ID=Thaps3397;Parent=Thaps3397;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 861360 863378 . - 0 ID=Thaps3397;Parent=Thaps3397;rank=1 chr3 . exon 861360 863378 . - . ID=Thaps3397.1;Parent=Thaps3397;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 863629 864879 . + . ID=Thaps3398;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXN9];external_name=Thaps3398;logic_name=jgi_thaps3 chr3 ensembl transcript 863629 864879 . + . ID=Thaps3398;Parent=Thaps3398;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 863629 864879 . + 0 ID=Thaps3398;Parent=Thaps3398;rank=1 chr3 . exon 863629 864879 . + . ID=Thaps3398.1;Parent=Thaps3398;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 868306 870237 . - . ID=Thaps21734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXP2];external_name=Thaps21734;logic_name=jgi_thaps3 chr3 ensembl transcript 868306 870237 . - . ID=Thaps21734;Parent=Thaps21734;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 868306 870237 . - 0 ID=Thaps21734;Parent=Thaps21734;rank=1 chr3 . exon 868306 870237 . - . ID=Thaps21734.1;Parent=Thaps21734;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 866683 867527 . - . ID=Thaps261766;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXP1];external_name=Thaps261766;logic_name=jgi_thaps3 chr3 ensembl transcript 866683 867527 . - . ID=Thaps261766;Parent=Thaps261766;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 866683 867064 . - 0 ID=Thaps261766;Parent=Thaps261766;rank=3 chr3 . exon 866683 867064 . - . ID=Thaps261766.3;Parent=Thaps261766;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 867152 867271 . - 0 ID=Thaps261766;Parent=Thaps261766;rank=2 chr3 . exon 867152 867271 . - . ID=Thaps261766.2;Parent=Thaps261766;constitutive=1;rank=2 chr3 . CDS 867293 867527 . - 0 ID=Thaps261766;Parent=Thaps261766;rank=1 chr3 . exon 867293 867527 . - . ID=Thaps261766.1;Parent=Thaps261766;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 875868 876776 . - . ID=Thaps33096;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXP5];external_name=Thaps33096;logic_name=jgi_thaps3 chr3 ensembl transcript 875868 876776 . - . ID=Thaps33096;Parent=Thaps33096;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 875868 875947 . - 0 ID=Thaps33096;Parent=Thaps33096;rank=3 chr3 . exon 875868 875947 . - . ID=Thaps33096.3;Parent=Thaps33096;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 876057 876182 . - 0 ID=Thaps33096;Parent=Thaps33096;rank=2 chr3 . exon 876057 876182 . - . ID=Thaps33096.2;Parent=Thaps33096;constitutive=1;rank=2 chr3 . CDS 876335 876776 . - 0 ID=Thaps33096;Parent=Thaps33096;rank=1 chr3 . exon 876335 876776 . - . ID=Thaps33096.1;Parent=Thaps33096;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 872612 873970 . + . ID=Thaps3402;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXP4];external_name=Thaps3402;logic_name=jgi_thaps3 chr3 ensembl transcript 872612 873970 . + . ID=Thaps3402;Parent=Thaps3402;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 872612 873970 . + 0 ID=Thaps3402;Parent=Thaps3402;rank=1 chr3 . exon 872612 873970 . + . ID=Thaps3402.1;Parent=Thaps3402;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 871044 872262 . + . ID=Thaps39864;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BXP3];external_name=Thaps39864;logic_name=jgi_thaps3 chr3 ensembl transcript 871044 872262 . + . ID=Thaps39864;Parent=Thaps39864;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 871044 871631 . + 0 ID=Thaps39864;Parent=Thaps39864;rank=1 chr3 . exon 871044 871631 . + . ID=Thaps39864.1;Parent=Thaps39864;constitutive=1;rank=1 chr3 . CDS 871714 872262 . + 0 ID=Thaps39864;Parent=Thaps39864;rank=2 chr3 . exon 871714 872262 . + . ID=Thaps39864.2;Parent=Thaps39864;constitutive=1;rank=2 chr3 . repeat_region 878742 878750 . ? . description=dust chr3 ensembl protein_coding_gene 885498 886260 . - . ID=Thaps261769;biotype=protein_coding;description=Apyrase [Source:UniProtKB/TrEMBL%3BAcc:B8BXP9];external_name=Thaps261769;logic_name=jgi_thaps3 chr3 ensembl transcript 885498 886260 . - . ID=Thaps261769;Parent=Thaps261769;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 885498 885530 . - 0 ID=Thaps261769;Parent=Thaps261769;rank=4 chr3 . exon 885498 885530 . - . ID=Thaps261769.4;Parent=Thaps261769;constitutive=1;rank=4 chr3 . CDS 885594 885618 . - 0 ID=Thaps261769;Parent=Thaps261769;rank=3 chr3 . exon 885594 885618 . - . ID=Thaps261769.3;Parent=Thaps261769;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 885715 886054 . - 0 ID=Thaps261769;Parent=Thaps261769;rank=2 chr3 . exon 885715 886054 . - . ID=Thaps261769.2;Parent=Thaps261769;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 886190 886260 . - 0 ID=Thaps261769;Parent=Thaps261769;rank=1 chr3 . exon 886190 886260 . - . ID=Thaps261769.1;Parent=Thaps261769;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 877515 878405 . + . ID=Thaps32874;biotype=protein_coding;description=Superoxide dismutase [Source:UniProtKB/TrEMBL%3BAcc:B8BXP6];external_name=Thaps32874;logic_name=jgi_thaps3 chr3 ensembl transcript 877515 878405 . + . ID=Thaps32874;Parent=Thaps32874;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 877515 877830 . + 0 ID=Thaps32874;Parent=Thaps32874;rank=1 chr3 . exon 877515 877830 . + . ID=Thaps32874.1;Parent=Thaps32874;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 877990 878405 . + 0 ID=Thaps32874;Parent=Thaps32874;rank=2 chr3 . exon 877990 878405 . + . ID=Thaps32874.2;Parent=Thaps32874;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 878814 882472 . + . ID=Thaps3404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXP7];external_name=Thaps3404;logic_name=jgi_thaps3 chr3 ensembl transcript 878814 882472 . + . ID=Thaps3404;Parent=Thaps3404;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 878814 880701 . + 0 ID=Thaps3404;Parent=Thaps3404;rank=1 chr3 . exon 878814 880701 . + . ID=Thaps3404.1;Parent=Thaps3404;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 880765 880839 . + 0 ID=Thaps3404;Parent=Thaps3404;rank=2 chr3 . exon 880765 880839 . + . ID=Thaps3404.2;Parent=Thaps3404;constitutive=1;rank=2 chr3 . CDS 880980 882472 . + 0 ID=Thaps3404;Parent=Thaps3404;rank=3 chr3 . exon 880980 882472 . + . ID=Thaps3404.3;Parent=Thaps3404;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 882876 883562 . - . ID=Thaps3405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXP8];external_name=Thaps3405;logic_name=jgi_thaps3 chr3 ensembl transcript 882876 883562 . - . ID=Thaps3405;Parent=Thaps3405;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 882876 883562 . - 0 ID=Thaps3405;Parent=Thaps3405;rank=1 chr3 . exon 882876 883562 . - . ID=Thaps3405.1;Parent=Thaps3405;constitutive=1;rank=1 chr3 . repeat_region 888357 888396 . ? . description=trf chr3 . repeat_region 896359 896396 . ? . description=trf chr3 ensembl protein_coding_gene 894975 896626 . + . ID=Thaps14527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ5];external_name=Thaps14527;logic_name=jgi_thaps3 chr3 ensembl transcript 894975 896626 . + . ID=Thaps14527;Parent=Thaps14527;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 894975 895259 . + 0 ID=Thaps14527;Parent=Thaps14527;rank=1 chr3 . exon 894975 895259 . + . ID=Thaps14527.1;Parent=Thaps14527;constitutive=1;rank=1 chr3 . CDS 895343 895397 . + 0 ID=Thaps14527;Parent=Thaps14527;rank=2 chr3 . exon 895343 895397 . + . ID=Thaps14527.2;Parent=Thaps14527;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 895512 895598 . + 0 ID=Thaps14527;Parent=Thaps14527;rank=3 chr3 . exon 895512 895598 . + . ID=Thaps14527.3;Parent=Thaps14527;constitutive=1;rank=3 chr3 . CDS 895641 895904 . + 0 ID=Thaps14527;Parent=Thaps14527;rank=4 chr3 . exon 895641 895904 . + . ID=Thaps14527.4;Parent=Thaps14527;constitutive=1;rank=4 chr3 . CDS 896040 896626 . + 0 ID=Thaps14527;Parent=Thaps14527;rank=5 chr3 . exon 896040 896626 . + . ID=Thaps14527.5;Parent=Thaps14527;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 892384 893263 . + . ID=Thaps21739;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ3];external_name=Thaps21739;logic_name=jgi_thaps3 chr3 ensembl transcript 892384 893263 . + . ID=Thaps21739;Parent=Thaps21739;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 892384 892581 . + 0 ID=Thaps21739;Parent=Thaps21739;rank=1 chr3 . exon 892384 892581 . + . ID=Thaps21739.1;Parent=Thaps21739;constitutive=1;rank=1 chr3 . CDS 892699 893139 . + 0 ID=Thaps21739;Parent=Thaps21739;rank=2 chr3 . exon 892699 893139 . + . ID=Thaps21739.2;Parent=Thaps21739;constitutive=1;rank=2 chr3 . CDS 893222 893263 . + 0 ID=Thaps21739;Parent=Thaps21739;rank=3 chr3 . exon 893222 893263 . + . ID=Thaps21739.3;Parent=Thaps21739;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 893237 894277 . + . ID=Thaps261771;biotype=protein_coding;description=Adenylate-kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ4];external_name=Thaps261771;logic_name=jgi_thaps3 chr3 ensembl transcript 893237 894277 . + . ID=Thaps261771;Parent=Thaps261771;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 893237 893255 . + 0 ID=Thaps261771;Parent=Thaps261771;rank=1 chr3 . exon 893237 893255 . + . ID=Thaps261771.1;Parent=Thaps261771;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 893573 893955 . + 0 ID=Thaps261771;Parent=Thaps261771;rank=2 chr3 . exon 893573 893955 . + . ID=Thaps261771.2;Parent=Thaps261771;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 893986 894277 . + 0 ID=Thaps261771;Parent=Thaps261771;rank=3 chr3 . exon 893986 894277 . + . ID=Thaps261771.3;Parent=Thaps261771;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 886991 888160 . - . ID=Thaps268467;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ0];external_name=Thaps268467;logic_name=jgi_thaps3 chr3 ensembl transcript 886991 888160 . - . ID=Thaps268467;Parent=Thaps268467;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 886991 887868 . - 0 ID=Thaps268467;Parent=Thaps268467;rank=2 chr3 . exon 886991 887868 . - . ID=Thaps268467.2;Parent=Thaps268467;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 888046 888160 . - 0 ID=Thaps268467;Parent=Thaps268467;rank=1 chr3 . exon 888046 888160 . - . ID=Thaps268467.1;Parent=Thaps268467;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 888856 890586 . + . ID=Thaps3408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ1];external_name=Thaps3408;logic_name=jgi_thaps3 chr3 ensembl transcript 888856 890586 . + . ID=Thaps3408;Parent=Thaps3408;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 888856 890586 . + 0 ID=Thaps3408;Parent=Thaps3408;rank=1 chr3 . exon 888856 890586 . + . ID=Thaps3408.1;Parent=Thaps3408;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 890759 891358 . - . ID=Thaps3409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ2];external_name=Thaps3409;logic_name=jgi_thaps3 chr3 ensembl transcript 890759 891358 . - . ID=Thaps3409;Parent=Thaps3409;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 890759 891358 . - 0 ID=Thaps3409;Parent=Thaps3409;rank=1 chr3 . exon 890759 891358 . - . ID=Thaps3409.1;Parent=Thaps3409;constitutive=1;rank=1 chr3 . repeat_region 905382 905665 . - . description=scaffold_2_785_2_1857336_1859042 chr3 ensembl protein_coding_gene 906188 907918 . + . ID=Thaps21742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXR0];external_name=Thaps21742;logic_name=jgi_thaps3 chr3 ensembl transcript 906188 907918 . + . ID=Thaps21742;Parent=Thaps21742;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 906188 907918 . + 0 ID=Thaps21742;Parent=Thaps21742;rank=1 chr3 . exon 906188 907918 . + . ID=Thaps21742.1;Parent=Thaps21742;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 898082 900006 . - . ID=Thaps3413;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ6];external_name=Thaps3413;logic_name=jgi_thaps3 chr3 ensembl transcript 898082 900006 . - . ID=Thaps3413;Parent=Thaps3413;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 898082 899090 . - 0 ID=Thaps3413;Parent=Thaps3413;rank=2 chr3 . exon 898082 899090 . - . ID=Thaps3413.2;Parent=Thaps3413;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 899171 900006 . - 0 ID=Thaps3413;Parent=Thaps3413;rank=1 chr3 . exon 899171 900006 . - . ID=Thaps3413.1;Parent=Thaps3413;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 900350 902190 . + . ID=Thaps3414;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ7];external_name=Thaps3414;logic_name=jgi_thaps3 chr3 ensembl transcript 900350 902190 . + . ID=Thaps3414;Parent=Thaps3414;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 900350 900554 . + 0 ID=Thaps3414;Parent=Thaps3414;rank=1 chr3 . exon 900350 900554 . + . ID=Thaps3414.1;Parent=Thaps3414;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 900590 900814 . + 0 ID=Thaps3414;Parent=Thaps3414;rank=2 chr3 . exon 900590 900814 . + . ID=Thaps3414.2;Parent=Thaps3414;constitutive=1;rank=2 chr3 . CDS 901099 901150 . + 0 ID=Thaps3414;Parent=Thaps3414;rank=3 chr3 . exon 901099 901150 . + . ID=Thaps3414.3;Parent=Thaps3414;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 901323 901989 . + 0 ID=Thaps3414;Parent=Thaps3414;rank=4 chr3 . exon 901323 901989 . + . ID=Thaps3414.4;Parent=Thaps3414;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 902161 902190 . + 0 ID=Thaps3414;Parent=Thaps3414;rank=5 chr3 . exon 902161 902190 . + . ID=Thaps3414.5;Parent=Thaps3414;constitutive=1;rank=5 chr3 ensembl protein_coding_gene 902878 903744 . - . ID=Thaps3415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ8];external_name=Thaps3415;logic_name=jgi_thaps3 chr3 ensembl transcript 902878 903744 . - . ID=Thaps3415;Parent=Thaps3415;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 902878 903744 . - 0 ID=Thaps3415;Parent=Thaps3415;rank=1 chr3 . exon 902878 903744 . - . ID=Thaps3415.1;Parent=Thaps3415;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 903974 904933 . - . ID=Thaps3416;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXQ9];external_name=Thaps3416;logic_name=jgi_thaps3 chr3 ensembl transcript 903974 904933 . - . ID=Thaps3416;Parent=Thaps3416;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 903974 904933 . - 0 ID=Thaps3416;Parent=Thaps3416;rank=1 chr3 . exon 903974 904933 . - . ID=Thaps3416.1;Parent=Thaps3416;constitutive=1;rank=1 chr3 . repeat_region 907435 907474 . ? . description=trf chr3 . repeat_region 910195 910221 . ? . description=trf chr3 ensembl protein_coding_gene 911051 913293 . + . ID=Thaps12500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXR2];external_name=Thaps12500;logic_name=jgi_thaps3 chr3 ensembl transcript 911051 913293 . + . ID=Thaps12500;Parent=Thaps12500;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 911051 911189 . + 0 ID=Thaps12500;Parent=Thaps12500;rank=1 chr3 . exon 911051 911189 . + . ID=Thaps12500.1;Parent=Thaps12500;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 911300 911486 . + 0 ID=Thaps12500;Parent=Thaps12500;rank=2 chr3 . exon 911300 911486 . + . ID=Thaps12500.2;Parent=Thaps12500;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 911544 913293 . + 0 ID=Thaps12500;Parent=Thaps12500;rank=3 chr3 . exon 911544 913293 . + . ID=Thaps12500.3;Parent=Thaps12500;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 916268 917321 . - . ID=Thaps261777;biotype=protein_coding;description=Eukaryotic translation initiation factor eIF4G [Source:UniProtKB/TrEMBL%3BAcc:B8BXR3];external_name=Thaps261777;logic_name=jgi_thaps3 chr3 ensembl transcript 916268 917321 . - . ID=Thaps261777;Parent=Thaps261777;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 916268 916331 . - 0 ID=Thaps261777;Parent=Thaps261777;rank=4 chr3 . exon 916268 916331 . - . ID=Thaps261777.4;Parent=Thaps261777;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 916412 916511 . - 0 ID=Thaps261777;Parent=Thaps261777;rank=3 chr3 . CDS 916557 916642 . - 0 ID=Thaps261777;Parent=Thaps261777;rank=2 chr3 . CDS 916661 917321 . - 0 ID=Thaps261777;Parent=Thaps261777;rank=1 chr3 ensembl protein_coding_gene 908799 909783 . - . ID=Thaps3418;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXR1];external_name=Thaps3418;logic_name=jgi_thaps3 chr3 ensembl transcript 908799 909783 . - . ID=Thaps3418;Parent=Thaps3418;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 908799 909065 . - 0 ID=Thaps3418;Parent=Thaps3418;rank=2 chr3 . exon 908799 909065 . - . ID=Thaps3418.2;Parent=Thaps3418;constitutive=1;rank=2 chr3 . CDS 909112 909783 . - 0 ID=Thaps3418;Parent=Thaps3418;rank=1 chr3 . exon 909112 909783 . - . ID=Thaps3418.1;Parent=Thaps3418;constitutive=1;rank=1 chr3 . repeat_region 917794 917817 . ? . description=dust chr3 . exon 916412 916511 . - . ID=Thaps261777.3;Parent=Thaps261777;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 916557 916642 . - . ID=Thaps261777.2;Parent=Thaps261777;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 916661 917321 . - . ID=Thaps261777.1;Parent=Thaps261777;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 922006 922890 . + . ID=Thaps27435;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXR5];external_name=Thaps27435;logic_name=jgi_thaps3 chr3 ensembl transcript 922006 922890 . + . ID=Thaps27435;Parent=Thaps27435;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 922006 922249 . + 0 ID=Thaps27435;Parent=Thaps27435;rank=1 chr3 . exon 922006 922249 . + . ID=Thaps27435.1;Parent=Thaps27435;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 922667 922890 . + 0 ID=Thaps27435;Parent=Thaps27435;rank=2 chr3 . exon 922667 922890 . + . ID=Thaps27435.2;Parent=Thaps27435;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 920772 921272 . - . ID=Thaps3422;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXR4];external_name=Thaps3422;logic_name=jgi_thaps3 chr3 ensembl transcript 920772 921272 . - . ID=Thaps3422;Parent=Thaps3422;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 920772 921272 . - 0 ID=Thaps3422;Parent=Thaps3422;rank=1 chr3 . exon 920772 921272 . - . ID=Thaps3422.1;Parent=Thaps3422;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 925964 927733 . + . ID=Thaps3424;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXR6];external_name=Thaps3424;logic_name=jgi_thaps3 chr3 ensembl transcript 925964 927733 . + . ID=Thaps3424;Parent=Thaps3424;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 925964 926090 . + 0 ID=Thaps3424;Parent=Thaps3424;rank=1 chr3 . exon 925964 926090 . + . ID=Thaps3424.1;Parent=Thaps3424;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 926172 927733 . + 0 ID=Thaps3424;Parent=Thaps3424;rank=2 chr3 . exon 926172 927733 . + . ID=Thaps3424.2;Parent=Thaps3424;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 931872 934059 . + . ID=Thaps21747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXR9];external_name=Thaps21747;logic_name=jgi_thaps3 chr3 ensembl transcript 931872 934059 . + . ID=Thaps21747;Parent=Thaps21747;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 931872 933293 . + 0 ID=Thaps21747;Parent=Thaps21747;rank=1 chr3 . exon 931872 933293 . + . ID=Thaps21747.1;Parent=Thaps21747;constitutive=1;rank=1 chr3 . CDS 933382 934059 . + 0 ID=Thaps21747;Parent=Thaps21747;rank=2 chr3 . exon 933382 934059 . + . ID=Thaps21747.2;Parent=Thaps21747;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 936110 937870 . + . ID=Thaps21748;biotype=protein_coding;description=Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL%3BAcc:B8BXS1];external_name=ALDO2;logic_name=jgi_thaps3 chr3 ensembl transcript 936110 937870 . + . ID=Thaps21748;Parent=Thaps21748;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 936110 936350 . + 0 ID=Thaps21748;Parent=Thaps21748;rank=1 chr3 . exon 936110 936350 . + . ID=Thaps21748.1;Parent=Thaps21748;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 936493 936608 . + 0 ID=Thaps21748;Parent=Thaps21748;rank=2 chr3 . CDS 936716 937203 . + 0 ID=Thaps21748;Parent=Thaps21748;rank=3 chr3 . CDS 937321 937630 . + 0 ID=Thaps21748;Parent=Thaps21748;rank=4 chr3 . CDS 937718 937870 . + 0 ID=Thaps21748;Parent=Thaps21748;rank=5 chr3 ensembl protein_coding_gene 928087 929278 . - . ID=Thaps261778;biotype=protein_coding;description=Transporter belonging to the MFS superfamily [Source:UniProtKB/TrEMBL%3BAcc:B8BXR7];external_name=Thaps261778;logic_name=jgi_thaps3 chr3 ensembl transcript 928087 929278 . - . ID=Thaps261778;Parent=Thaps261778;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 928087 928518 . - 0 ID=Thaps261778;Parent=Thaps261778;rank=3 chr3 . exon 928087 928518 . - . ID=Thaps261778.3;Parent=Thaps261778;constitutive=1;rank=3 chr3 . CDS 928593 928661 . - 0 ID=Thaps261778;Parent=Thaps261778;rank=2 chr3 . exon 928593 928661 . - . ID=Thaps261778.2;Parent=Thaps261778;constitutive=1;rank=2 chr3 . CDS 928735 929278 . - 0 ID=Thaps261778;Parent=Thaps261778;rank=1 chr3 . exon 928735 929278 . - . ID=Thaps261778.1;Parent=Thaps261778;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 930757 931077 . - . ID=Thaps3426;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXR8];external_name=Thaps3426;logic_name=jgi_thaps3 chr3 ensembl transcript 930757 931077 . - . ID=Thaps3426;Parent=Thaps3426;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 930757 931077 . - 0 ID=Thaps3426;Parent=Thaps3426;rank=1 chr3 . exon 930757 931077 . - . ID=Thaps3426.1;Parent=Thaps3426;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 934641 935796 . + . ID=Thaps3428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXS0];external_name=Thaps3428;logic_name=jgi_thaps3 chr3 ensembl transcript 934641 935796 . + . ID=Thaps3428;Parent=Thaps3428;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 934641 934735 . + 0 ID=Thaps3428;Parent=Thaps3428;rank=1 chr3 . exon 934641 934735 . + . ID=Thaps3428.1;Parent=Thaps3428;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 934842 935796 . + 0 ID=Thaps3428;Parent=Thaps3428;rank=2 chr3 . exon 934842 935796 . + . ID=Thaps3428.2;Parent=Thaps3428;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . repeat_region 941326 941334 . ? . description=dust chr3 . repeat_region 941669 941719 . ? . description=trf chr3 . exon 936493 936608 . + . ID=Thaps21748.2;Parent=Thaps21748;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 936716 937203 . + . ID=Thaps21748.3;Parent=Thaps21748;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . exon 937321 937630 . + . ID=Thaps21748.4;Parent=Thaps21748;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . exon 937718 937870 . + . ID=Thaps21748.5;Parent=Thaps21748;constitutive=1;rank=5 chr3 ensembl protein_coding_gene 944085 947970 . - . ID=Thaps261781;biotype=protein_coding;description=MutS family [Source:UniProtKB/TrEMBL%3BAcc:B8BXS4];external_name=MUTS;logic_name=jgi_thaps3 chr3 ensembl transcript 944085 947970 . - . ID=Thaps261781;Parent=Thaps261781;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 944085 944635 . - 0 ID=Thaps261781;Parent=Thaps261781;rank=7 chr3 . exon 944085 944635 . - . ID=Thaps261781.7;Parent=Thaps261781;constitutive=1;ensembl_end_phase=2;rank=7 chr3 . CDS 944734 946032 . - 0 ID=Thaps261781;Parent=Thaps261781;rank=6 chr3 . exon 944734 946032 . - . ID=Thaps261781.6;Parent=Thaps261781;constitutive=1;rank=6 chr3 . CDS 946174 946245 . - 0 ID=Thaps261781;Parent=Thaps261781;rank=5 chr3 . exon 946174 946245 . - . ID=Thaps261781.5;Parent=Thaps261781;constitutive=1;rank=5 chr3 . CDS 946332 946613 . - 0 ID=Thaps261781;Parent=Thaps261781;rank=4 chr3 . CDS 946695 946872 . - 0 ID=Thaps261781;Parent=Thaps261781;rank=3 chr3 . CDS 946903 947649 . - 0 ID=Thaps261781;Parent=Thaps261781;rank=2 chr3 . CDS 947803 947970 . - 0 ID=Thaps261781;Parent=Thaps261781;rank=1 chr3 ensembl protein_coding_gene 938381 939432 . - . ID=Thaps33021;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXS2];external_name=Thaps33021;logic_name=jgi_thaps3 chr3 ensembl transcript 938381 939432 . - . ID=Thaps33021;Parent=Thaps33021;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 938381 938426 . - 0 ID=Thaps33021;Parent=Thaps33021;rank=2 chr3 . exon 938381 938426 . - . ID=Thaps33021.2;Parent=Thaps33021;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 938516 939432 . - 0 ID=Thaps33021;Parent=Thaps33021;rank=1 chr3 . exon 938516 939432 . - . ID=Thaps33021.1;Parent=Thaps33021;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 940098 940475 . - . ID=Thaps33067;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXS3];external_name=Thaps33067;logic_name=jgi_thaps3 chr3 ensembl transcript 940098 940475 . - . ID=Thaps33067;Parent=Thaps33067;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 940098 940475 . - 0 ID=Thaps33067;Parent=Thaps33067;rank=1 chr3 . exon 940098 940475 . - . ID=Thaps33067.1;Parent=Thaps33067;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 949520 949942 . - . ID=Thaps21749;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXS5];external_name=Thaps21749;logic_name=jgi_thaps3 chr3 ensembl transcript 949520 949942 . - . ID=Thaps21749;Parent=Thaps21749;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 949520 949942 . - 0 ID=Thaps21749;Parent=Thaps21749;rank=1 chr3 . exon 949520 949942 . - . ID=Thaps21749.1;Parent=Thaps21749;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 951038 952463 . + . ID=Thaps21750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXS6];external_name=Thaps21750;logic_name=jgi_thaps3 chr3 ensembl transcript 951038 952463 . + . ID=Thaps21750;Parent=Thaps21750;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 951038 951074 . + 0 ID=Thaps21750;Parent=Thaps21750;rank=1 chr3 . exon 951038 951074 . + . ID=Thaps21750.1;Parent=Thaps21750;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 951169 951685 . + 0 ID=Thaps21750;Parent=Thaps21750;rank=2 chr3 . exon 951169 951685 . + . ID=Thaps21750.2;Parent=Thaps21750;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 951761 952463 . + 0 ID=Thaps21750;Parent=Thaps21750;rank=3 chr3 . exon 951761 952463 . + . ID=Thaps21750.3;Parent=Thaps21750;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 952562 958552 . - . ID=Thaps21751;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXS7];external_name=Thaps21751;logic_name=jgi_thaps3 chr3 ensembl transcript 952562 958552 . - . ID=Thaps21751;Parent=Thaps21751;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 952562 952717 . - 0 ID=Thaps21751;Parent=Thaps21751;rank=6 chr3 . exon 952562 952717 . - . ID=Thaps21751.6;Parent=Thaps21751;constitutive=1;rank=6 chr3 . CDS 952817 953299 . - 0 ID=Thaps21751;Parent=Thaps21751;rank=5 chr3 . exon 952817 953299 . - . ID=Thaps21751.5;Parent=Thaps21751;constitutive=1;rank=5 chr3 . CDS 953373 955092 . - 0 ID=Thaps21751;Parent=Thaps21751;rank=4 chr3 . exon 953373 955092 . - . ID=Thaps21751.4;Parent=Thaps21751;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 955245 955567 . - 0 ID=Thaps21751;Parent=Thaps21751;rank=3 chr3 . exon 955245 955567 . - . ID=Thaps21751.3;Parent=Thaps21751;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 955645 956673 . - 0 ID=Thaps21751;Parent=Thaps21751;rank=2 chr3 . exon 955645 956673 . - . ID=Thaps21751.2;Parent=Thaps21751;constitutive=1;rank=2 chr3 . CDS 956756 958552 . - 0 ID=Thaps21751;Parent=Thaps21751;rank=1 chr3 . exon 946332 946613 . - . ID=Thaps261781.4;Parent=Thaps261781;constitutive=1;rank=4 chr3 . exon 946695 946872 . - . ID=Thaps261781.3;Parent=Thaps261781;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 946903 947649 . - . ID=Thaps261781.2;Parent=Thaps261781;constitutive=1;rank=2 chr3 . exon 947803 947970 . - . ID=Thaps261781.1;Parent=Thaps261781;constitutive=1;rank=1 chr3 . repeat_region 965918 965928 . ? . description=dust chr3 . exon 956756 958552 . - . ID=Thaps21751.1;Parent=Thaps21751;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 966085 968209 . - . ID=Thaps21752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT0];external_name=Thaps21752;logic_name=jgi_thaps3 chr3 ensembl transcript 966085 968209 . - . ID=Thaps21752;Parent=Thaps21752;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 966085 967467 . - 0 ID=Thaps21752;Parent=Thaps21752;rank=3 chr3 . exon 966085 967467 . - . ID=Thaps21752.3;Parent=Thaps21752;constitutive=1;rank=3 chr3 . CDS 967498 968041 . - 0 ID=Thaps21752;Parent=Thaps21752;rank=2 chr3 . CDS 968130 968209 . - 0 ID=Thaps21752;Parent=Thaps21752;rank=1 chr3 ensembl protein_coding_gene 960308 960670 . + . ID=Thaps3435;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXS8];external_name=Thaps3435;logic_name=jgi_thaps3 chr3 ensembl transcript 960308 960670 . + . ID=Thaps3435;Parent=Thaps3435;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 960308 960670 . + 0 ID=Thaps3435;Parent=Thaps3435;rank=1 chr3 . exon 960308 960670 . + . ID=Thaps3435.1;Parent=Thaps3435;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 961317 965210 . + . ID=Thaps3436;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXS9];external_name=Thaps3436;logic_name=jgi_thaps3 chr3 ensembl transcript 961317 965210 . + . ID=Thaps3436;Parent=Thaps3436;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 961317 961332 . + 0 ID=Thaps3436;Parent=Thaps3436;rank=1 chr3 . exon 961317 961332 . + . ID=Thaps3436.1;Parent=Thaps3436;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 961488 963879 . + 0 ID=Thaps3436;Parent=Thaps3436;rank=2 chr3 . exon 961488 963879 . + . ID=Thaps3436.2;Parent=Thaps3436;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 963945 964437 . + 0 ID=Thaps3436;Parent=Thaps3436;rank=3 chr3 . exon 963945 964437 . + . ID=Thaps3436.3;Parent=Thaps3436;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 964533 964607 . + 0 ID=Thaps3436;Parent=Thaps3436;rank=4 chr3 . exon 964533 964607 . + . ID=Thaps3436.4;Parent=Thaps3436;constitutive=1;rank=4 chr3 . CDS 964698 965210 . + 0 ID=Thaps3436;Parent=Thaps3436;rank=5 chr3 . exon 964698 965210 . + . ID=Thaps3436.5;Parent=Thaps3436;constitutive=1;rank=5 chr3 . repeat_region 969771 969797 . ? . description=trf chr3 . exon 967498 968041 . - . ID=Thaps21752.2;Parent=Thaps21752;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . exon 968130 968209 . - . ID=Thaps21752.1;Parent=Thaps21752;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 972303 973565 . - . ID=Thaps21753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT3];external_name=Thaps21753;logic_name=jgi_thaps3 chr3 ensembl transcript 972303 973565 . - . ID=Thaps21753;Parent=Thaps21753;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 972303 972427 . - 0 ID=Thaps21753;Parent=Thaps21753;rank=3 chr3 . exon 972303 972427 . - . ID=Thaps21753.3;Parent=Thaps21753;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 972518 972938 . - 0 ID=Thaps21753;Parent=Thaps21753;rank=2 chr3 . exon 972518 972938 . - . ID=Thaps21753.2;Parent=Thaps21753;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 973047 973565 . - 0 ID=Thaps21753;Parent=Thaps21753;rank=1 chr3 . exon 973047 973565 . - . ID=Thaps21753.1;Parent=Thaps21753;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 974251 974493 . + . ID=Thaps32741;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT4];external_name=Thaps32741;logic_name=jgi_thaps3 chr3 ensembl transcript 974251 974493 . + . ID=Thaps32741;Parent=Thaps32741;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 974251 974493 . + 0 ID=Thaps32741;Parent=Thaps32741;rank=1 chr3 . exon 974251 974493 . + . ID=Thaps32741.1;Parent=Thaps32741;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 975025 975967 . - . ID=Thaps33104;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT5];external_name=Thaps33104;logic_name=jgi_thaps3 chr3 ensembl transcript 975025 975967 . - . ID=Thaps33104;Parent=Thaps33104;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 975025 975633 . - 0 ID=Thaps33104;Parent=Thaps33104;rank=2 chr3 . exon 975025 975633 . - . ID=Thaps33104.2;Parent=Thaps33104;constitutive=1;rank=2 chr3 . CDS 975716 975967 . - 0 ID=Thaps33104;Parent=Thaps33104;rank=1 chr3 . exon 975716 975967 . - . ID=Thaps33104.1;Parent=Thaps33104;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 968794 969543 . + . ID=Thaps3438;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT1];external_name=Thaps3438;logic_name=jgi_thaps3 chr3 ensembl transcript 968794 969543 . + . ID=Thaps3438;Parent=Thaps3438;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 968794 969543 . + 0 ID=Thaps3438;Parent=Thaps3438;rank=1 chr3 . exon 968794 969543 . + . ID=Thaps3438.1;Parent=Thaps3438;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 969969 972150 . + . ID=Thaps3439;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT2];external_name=Thaps3439;logic_name=jgi_thaps3 chr3 ensembl transcript 969969 972150 . + . ID=Thaps3439;Parent=Thaps3439;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 969969 970549 . + 0 ID=Thaps3439;Parent=Thaps3439;rank=1 chr3 . exon 969969 970549 . + . ID=Thaps3439.1;Parent=Thaps3439;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 971105 971405 . + 0 ID=Thaps3439;Parent=Thaps3439;rank=2 chr3 . exon 971105 971405 . + . ID=Thaps3439.2;Parent=Thaps3439;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 971485 972150 . + 0 ID=Thaps3439;Parent=Thaps3439;rank=3 chr3 . exon 971485 972150 . + . ID=Thaps3439.3;Parent=Thaps3439;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 980236 982194 . - . ID=Thaps21756;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT6];external_name=Thaps21756;logic_name=jgi_thaps3 chr3 ensembl transcript 980236 982194 . - . ID=Thaps21756;Parent=Thaps21756;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 980236 980778 . - 0 ID=Thaps21756;Parent=Thaps21756;rank=3 chr3 . exon 980236 980778 . - . ID=Thaps21756.3;Parent=Thaps21756;constitutive=1;rank=3 chr3 . CDS 980871 981413 . - 0 ID=Thaps21756;Parent=Thaps21756;rank=2 chr3 . exon 980871 981413 . - . ID=Thaps21756.2;Parent=Thaps21756;constitutive=1;rank=2 chr3 . CDS 981502 982194 . - 0 ID=Thaps21756;Parent=Thaps21756;rank=1 chr3 . exon 981502 982194 . - . ID=Thaps21756.1;Parent=Thaps21756;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 983502 985713 . - . ID=Thaps21757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT7];external_name=Thaps21757;logic_name=jgi_thaps3 chr3 ensembl transcript 983502 985713 . - . ID=Thaps21757;Parent=Thaps21757;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 983502 983754 . - 0 ID=Thaps21757;Parent=Thaps21757;rank=2 chr3 . exon 983502 983754 . - . ID=Thaps21757.2;Parent=Thaps21757;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 983837 985713 . - 0 ID=Thaps21757;Parent=Thaps21757;rank=1 chr3 . exon 983837 985713 . - . ID=Thaps21757.1;Parent=Thaps21757;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . repeat_region 986194 986321 . + . description=Harbinger1_TP chr3 . repeat_region 986346 986356 . ? . description=dust chr3 . repeat_region 986661 986821 . + . description=Harbinger1_TP chr3 . repeat_region 987423 987430 . ? . description=dust chr3 . repeat_region 987703 987710 . ? . description=dust chr3 ensembl protein_coding_gene 992723 994404 . - . ID=Thaps268472;biotype=protein_coding;description=Sugar transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BXU0];external_name=Thaps268472;logic_name=jgi_thaps3 chr3 ensembl transcript 992723 994404 . - . ID=Thaps268472;Parent=Thaps268472;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 992723 993121 . - 0 ID=Thaps268472;Parent=Thaps268472;rank=3 chr3 . exon 992723 993121 . - . ID=Thaps268472.3;Parent=Thaps268472;constitutive=1;rank=3 chr3 . CDS 993202 993643 . - 0 ID=Thaps268472;Parent=Thaps268472;rank=2 chr3 . exon 993202 993643 . - . ID=Thaps268472.2;Parent=Thaps268472;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 993740 994404 . - 0 ID=Thaps268472;Parent=Thaps268472;rank=1 chr3 . exon 993740 994404 . - . ID=Thaps268472.1;Parent=Thaps268472;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 987160 988992 . + . ID=Thaps3447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT8];external_name=Thaps3447;logic_name=jgi_thaps3 chr3 ensembl transcript 987160 988992 . + . ID=Thaps3447;Parent=Thaps3447;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 987160 988992 . + 0 ID=Thaps3447;Parent=Thaps3447;rank=1 chr3 . exon 987160 988992 . + . ID=Thaps3447.1;Parent=Thaps3447;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 990903 991721 . + . ID=Thaps3448;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXT9];external_name=Thaps3448;logic_name=jgi_thaps3 chr3 ensembl transcript 990903 991721 . + . ID=Thaps3448;Parent=Thaps3448;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 990903 991078 . + 0 ID=Thaps3448;Parent=Thaps3448;rank=1 chr3 . exon 990903 991078 . + . ID=Thaps3448.1;Parent=Thaps3448;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 991166 991721 . + 0 ID=Thaps3448;Parent=Thaps3448;rank=2 chr3 . exon 991166 991721 . + . ID=Thaps3448.2;Parent=Thaps3448;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 995282 996041 . + . ID=Thaps3450;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXU1];external_name=Thaps3450;logic_name=jgi_thaps3 chr3 ensembl transcript 995282 996041 . + . ID=Thaps3450;Parent=Thaps3450;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 995282 995681 . + 0 ID=Thaps3450;Parent=Thaps3450;rank=1 chr3 . exon 995282 995681 . + . ID=Thaps3450.1;Parent=Thaps3450;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 995743 996041 . + 0 ID=Thaps3450;Parent=Thaps3450;rank=2 chr3 . exon 995743 996041 . + . ID=Thaps3450.2;Parent=Thaps3450;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . repeat_region 1000591 1000642 . ? . description=trf chr3 . repeat_region 1000595 1000633 . ? . description=trf chr3 ensembl protein_coding_gene 997740 998591 . + . ID=Thaps16612;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXU2];external_name=Thaps16612;logic_name=jgi_thaps3 chr3 ensembl transcript 997740 998591 . + . ID=Thaps16612;Parent=Thaps16612;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 997740 997841 . + 0 ID=Thaps16612;Parent=Thaps16612;rank=1 chr3 . exon 997740 997841 . + . ID=Thaps16612.1;Parent=Thaps16612;constitutive=1;rank=1 chr3 . CDS 997893 998292 . + 0 ID=Thaps16612;Parent=Thaps16612;rank=2 chr3 . exon 997893 998292 . + . ID=Thaps16612.2;Parent=Thaps16612;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 998335 998591 . + 0 ID=Thaps16612;Parent=Thaps16612;rank=3 chr3 . exon 998335 998591 . + . ID=Thaps16612.3;Parent=Thaps16612;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 998947 1000372 . - . ID=Thaps3452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXU3];external_name=Thaps3452;logic_name=jgi_thaps3 chr3 ensembl transcript 998947 1000372 . - . ID=Thaps3452;Parent=Thaps3452;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 998947 999465 . - 0 ID=Thaps3452;Parent=Thaps3452;rank=5 chr3 . exon 998947 999465 . - . ID=Thaps3452.5;Parent=Thaps3452;constitutive=1;rank=5 chr3 . CDS 999568 999679 . - 0 ID=Thaps3452;Parent=Thaps3452;rank=4 chr3 . exon 999568 999679 . - . ID=Thaps3452.4;Parent=Thaps3452;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 999770 999922 . - 0 ID=Thaps3452;Parent=Thaps3452;rank=3 chr3 . exon 999770 999922 . - . ID=Thaps3452.3;Parent=Thaps3452;constitutive=1;rank=3 chr3 . CDS 1000006 1000105 . - 0 ID=Thaps3452;Parent=Thaps3452;rank=2 chr3 . exon 1000006 1000105 . - . ID=Thaps3452.2;Parent=Thaps3452;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1000192 1000372 . - 0 ID=Thaps3452;Parent=Thaps3452;rank=1 chr3 . exon 1000192 1000372 . - . ID=Thaps3452.1;Parent=Thaps3452;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1004561 1005488 . + . ID=Thaps3453;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXU4];external_name=Thaps3453;logic_name=jgi_thaps3 chr3 ensembl transcript 1004561 1005488 . + . ID=Thaps3453;Parent=Thaps3453;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1004561 1005000 . + 0 ID=Thaps3453;Parent=Thaps3453;rank=1 chr3 . exon 1004561 1005000 . + . ID=Thaps3453.1;Parent=Thaps3453;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1005107 1005488 . + 0 ID=Thaps3453;Parent=Thaps3453;rank=2 chr3 . exon 1005107 1005488 . + . ID=Thaps3453.2;Parent=Thaps3453;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1005912 1006505 . + . ID=Thaps3454;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXU5];external_name=Thaps3454;logic_name=jgi_thaps3 chr3 ensembl transcript 1005912 1006505 . + . ID=Thaps3454;Parent=Thaps3454;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1005912 1006505 . + 0 ID=Thaps3454;Parent=Thaps3454;rank=1 chr3 . exon 1005912 1006505 . + . ID=Thaps3454.1;Parent=Thaps3454;constitutive=1;rank=1 chr3 . repeat_region 1009842 1009849 . ? . description=dust chr3 ensembl protein_coding_gene 1008389 1009331 . - . ID=Thaps17845;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXU6];external_name=Thaps17845;logic_name=jgi_thaps3 chr3 ensembl transcript 1008389 1009331 . - . ID=Thaps17845;Parent=Thaps17845;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1008389 1008571 . - 0 ID=Thaps17845;Parent=Thaps17845;rank=3 chr3 . exon 1008389 1008571 . - . ID=Thaps17845.3;Parent=Thaps17845;constitutive=1;rank=3 chr3 . CDS 1008657 1008947 . - 0 ID=Thaps17845;Parent=Thaps17845;rank=2 chr3 . exon 1008657 1008947 . - . ID=Thaps17845.2;Parent=Thaps17845;constitutive=1;rank=2 chr3 . CDS 1009164 1009331 . - 0 ID=Thaps17845;Parent=Thaps17845;rank=1 chr3 . exon 1009164 1009331 . - . ID=Thaps17845.1;Parent=Thaps17845;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1014305 1015002 . - . ID=Thaps261788;biotype=protein_coding;description=Methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BXU9];external_name=Thaps261788;logic_name=jgi_thaps3 chr3 ensembl transcript 1014305 1015002 . - . ID=Thaps261788;Parent=Thaps261788;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1014305 1015002 . - 0 ID=Thaps261788;Parent=Thaps261788;rank=1 chr3 . exon 1014305 1015002 . - . ID=Thaps261788.1;Parent=Thaps261788;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1010026 1011114 . - . ID=Thaps268474;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXU7];external_name=Thaps268474;logic_name=jgi_thaps3 chr3 ensembl transcript 1010026 1011114 . - . ID=Thaps268474;Parent=Thaps268474;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1010026 1011114 . - 0 ID=Thaps268474;Parent=Thaps268474;rank=1 chr3 . exon 1010026 1011114 . - . ID=Thaps268474.1;Parent=Thaps268474;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1012050 1014190 . + . ID=Thaps3456;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXU8];external_name=Thaps3456;logic_name=jgi_thaps3 chr3 ensembl transcript 1012050 1014190 . + . ID=Thaps3456;Parent=Thaps3456;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1012050 1013802 . + 0 ID=Thaps3456;Parent=Thaps3456;rank=1 chr3 . exon 1012050 1013802 . + . ID=Thaps3456.1;Parent=Thaps3456;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1013883 1014190 . + 0 ID=Thaps3456;Parent=Thaps3456;rank=2 chr3 . exon 1013883 1014190 . + . ID=Thaps3456.2;Parent=Thaps3456;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 1018290 1022599 . + . ID=Thaps268475;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXV2];external_name=Thaps268475;logic_name=jgi_thaps3 chr3 ensembl transcript 1018290 1022599 . + . ID=Thaps268475;Parent=Thaps268475;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1018290 1018307 . + 0 ID=Thaps268475;Parent=Thaps268475;rank=1 chr3 . exon 1018290 1018307 . + . ID=Thaps268475.1;Parent=Thaps268475;constitutive=1;rank=1 chr3 . CDS 1018425 1018603 . + 0 ID=Thaps268475;Parent=Thaps268475;rank=2 chr3 . exon 1018425 1018603 . + . ID=Thaps268475.2;Parent=Thaps268475;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1018696 1019095 . + 0 ID=Thaps268475;Parent=Thaps268475;rank=3 chr3 . exon 1018696 1019095 . + . ID=Thaps268475.3;Parent=Thaps268475;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1019174 1019587 . + 0 ID=Thaps268475;Parent=Thaps268475;rank=4 chr3 . exon 1019174 1019587 . + . ID=Thaps268475.4;Parent=Thaps268475;constitutive=1;rank=4 chr3 . CDS 1019688 1020386 . + 0 ID=Thaps268475;Parent=Thaps268475;rank=5 chr3 . exon 1019688 1020386 . + . ID=Thaps268475.5;Parent=Thaps268475;constitutive=1;rank=5 chr3 . CDS 1020627 1020846 . + 0 ID=Thaps268475;Parent=Thaps268475;rank=6 chr3 . exon 1020627 1020846 . + . ID=Thaps268475.6;Parent=Thaps268475;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 1020967 1021360 . + 0 ID=Thaps268475;Parent=Thaps268475;rank=7 chr3 . exon 1020967 1021360 . + . ID=Thaps268475.7;Parent=Thaps268475;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . CDS 1021940 1022135 . + 0 ID=Thaps268475;Parent=Thaps268475;rank=8 chr3 . exon 1021940 1022135 . + . ID=Thaps268475.8;Parent=Thaps268475;constitutive=1;ensembl_end_phase=1;rank=8 chr3 . CDS 1022324 1022599 . + 0 ID=Thaps268475;Parent=Thaps268475;rank=9 chr3 . exon 1022324 1022599 . + . ID=Thaps268475.9;Parent=Thaps268475;constitutive=1;rank=9 chr3 ensembl protein_coding_gene 1016294 1017061 . + . ID=Thaps3458;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXV0];external_name=Thaps3458;logic_name=jgi_thaps3 chr3 ensembl transcript 1016294 1017061 . + . ID=Thaps3458;Parent=Thaps3458;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1016294 1017061 . + 0 ID=Thaps3458;Parent=Thaps3458;rank=1 chr3 . exon 1016294 1017061 . + . ID=Thaps3458.1;Parent=Thaps3458;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1017257 1018033 . - . ID=Thaps3459;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXV1];external_name=Thaps3459;logic_name=jgi_thaps3 chr3 ensembl transcript 1017257 1018033 . - . ID=Thaps3459;Parent=Thaps3459;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1017257 1018033 . - 0 ID=Thaps3459;Parent=Thaps3459;rank=1 chr3 . exon 1017257 1018033 . - . ID=Thaps3459.1;Parent=Thaps3459;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1024287 1026414 . + . ID=Thaps3461;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXV3];external_name=Thaps3461;logic_name=jgi_thaps3 chr3 ensembl transcript 1024287 1026414 . + . ID=Thaps3461;Parent=Thaps3461;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1024287 1024297 . + 0 ID=Thaps3461;Parent=Thaps3461;rank=1 chr3 . exon 1024287 1024297 . + . ID=Thaps3461.1;Parent=Thaps3461;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1025168 1025240 . + 0 ID=Thaps3461;Parent=Thaps3461;rank=2 chr3 . exon 1025168 1025240 . + . ID=Thaps3461.2;Parent=Thaps3461;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1025340 1025442 . + 0 ID=Thaps3461;Parent=Thaps3461;rank=3 chr3 . exon 1025340 1025442 . + . ID=Thaps3461.3;Parent=Thaps3461;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1025567 1025838 . + 0 ID=Thaps3461;Parent=Thaps3461;rank=4 chr3 . exon 1025567 1025838 . + . ID=Thaps3461.4;Parent=Thaps3461;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1025899 1026414 . + 0 ID=Thaps3461;Parent=Thaps3461;rank=5 chr3 . repeat_region 1027683 1027742 . ? . description=dust chr3 . repeat_region 1029959 1030027 . ? . description=dust chr3 . repeat_region 1029960 1030014 . ? . description=trf chr3 . repeat_region 1029960 1030027 . ? . description=trf chr3 . repeat_region 1029969 1030020 . ? . description=trf chr3 . repeat_region 1030180 1030240 . ? . description=dust chr3 . repeat_region 1031840 1031877 . ? . description=trf chr3 . repeat_region 1031840 1031880 . ? . description=trf chr3 . repeat_region 1034310 1034331 . ? . description=trf chr3 . repeat_region 1034310 1034331 . ? . description=dust chr3 ensembl protein_coding_gene 1035291 1036927 . + . ID=Thaps27451;biotype=protein_coding;description=Ruvb-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXV8];external_name=Thaps27451;logic_name=jgi_thaps3 chr3 ensembl transcript 1035291 1036927 . + . ID=Thaps27451;Parent=Thaps27451;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1035291 1035494 . + 0 ID=Thaps27451;Parent=Thaps27451;rank=1 chr3 . exon 1035291 1035494 . + . ID=Thaps27451.1;Parent=Thaps27451;constitutive=1;rank=1 chr3 . CDS 1035647 1036927 . + 0 ID=Thaps27451;Parent=Thaps27451;rank=2 chr3 . exon 1035647 1036927 . + . ID=Thaps27451.2;Parent=Thaps27451;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 1033450 1034511 . - . ID=Thaps32564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXV7];external_name=Thaps32564;logic_name=jgi_thaps3 chr3 ensembl transcript 1033450 1034511 . - . ID=Thaps32564;Parent=Thaps32564;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1033450 1034054 . - 0 ID=Thaps32564;Parent=Thaps32564;rank=3 chr3 . exon 1033450 1034054 . - . ID=Thaps32564.3;Parent=Thaps32564;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1034097 1034273 . - 0 ID=Thaps32564;Parent=Thaps32564;rank=2 chr3 . exon 1034097 1034273 . - . ID=Thaps32564.2;Parent=Thaps32564;constitutive=1;rank=2 chr3 . CDS 1034340 1034511 . - 0 ID=Thaps32564;Parent=Thaps32564;rank=1 chr3 . exon 1034340 1034511 . - . ID=Thaps32564.1;Parent=Thaps32564;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1030255 1030839 . + . ID=Thaps33169;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXV6];external_name=Thaps33169;logic_name=jgi_thaps3 chr3 ensembl transcript 1030255 1030839 . + . ID=Thaps33169;Parent=Thaps33169;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1030255 1030839 . + 0 ID=Thaps33169;Parent=Thaps33169;rank=1 chr3 . exon 1030255 1030839 . + . ID=Thaps33169.1;Parent=Thaps33169;constitutive=1;rank=1 chr3 . exon 1025899 1026414 . + . ID=Thaps3461.5;Parent=Thaps3461;constitutive=1;rank=5 chr3 ensembl protein_coding_gene 1026550 1027972 . - . ID=Thaps3462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXV4];external_name=Thaps3462;logic_name=jgi_thaps3 chr3 ensembl transcript 1026550 1027972 . - . ID=Thaps3462;Parent=Thaps3462;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1026550 1026922 . - 0 ID=Thaps3462;Parent=Thaps3462;rank=3 chr3 . exon 1026550 1026922 . - . ID=Thaps3462.3;Parent=Thaps3462;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1026962 1027789 . - 0 ID=Thaps3462;Parent=Thaps3462;rank=2 chr3 . exon 1026962 1027789 . - . ID=Thaps3462.2;Parent=Thaps3462;constitutive=1;rank=2 chr3 . CDS 1027860 1027972 . - 0 ID=Thaps3462;Parent=Thaps3462;rank=1 chr3 . exon 1027860 1027972 . - . ID=Thaps3462.1;Parent=Thaps3462;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1028786 1029526 . - . ID=Thaps3463;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXV5];external_name=Thaps3463;logic_name=jgi_thaps3 chr3 ensembl transcript 1028786 1029526 . - . ID=Thaps3463;Parent=Thaps3463;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1028786 1029526 . - 0 ID=Thaps3463;Parent=Thaps3463;rank=1 chr3 . exon 1028786 1029526 . - . ID=Thaps3463.1;Parent=Thaps3463;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1041507 1041776 . - . ID=Thaps19818;biotype=protein_coding;description=30S ribosomal protein S15 [Source:UniProtKB/TrEMBL%3BAcc:B8BXW1];external_name=RT15;logic_name=jgi_thaps3 chr3 ensembl transcript 1041507 1041776 . - . ID=Thaps19818;Parent=Thaps19818;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1041507 1041776 . - 0 ID=Thaps19818;Parent=Thaps19818;rank=1 chr3 . exon 1041507 1041776 . - . ID=Thaps19818.1;Parent=Thaps19818;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1044134 1045965 . - . ID=Thaps21768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXW3];external_name=Thaps21768;logic_name=jgi_thaps3 chr3 ensembl transcript 1044134 1045965 . - . ID=Thaps21768;Parent=Thaps21768;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1044134 1045099 . - 0 ID=Thaps21768;Parent=Thaps21768;rank=4 chr3 . exon 1044134 1045099 . - . ID=Thaps21768.4;Parent=Thaps21768;constitutive=1;rank=4 chr3 . CDS 1045178 1045384 . - 0 ID=Thaps21768;Parent=Thaps21768;rank=3 chr3 . exon 1045178 1045384 . - . ID=Thaps21768.3;Parent=Thaps21768;constitutive=1;rank=3 chr3 . CDS 1045438 1045548 . - 0 ID=Thaps21768;Parent=Thaps21768;rank=2 chr3 . exon 1045438 1045548 . - . ID=Thaps21768.2;Parent=Thaps21768;constitutive=1;rank=2 chr3 . CDS 1045651 1045965 . - 0 ID=Thaps21768;Parent=Thaps21768;rank=1 chr3 . exon 1045651 1045965 . - . ID=Thaps21768.1;Parent=Thaps21768;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1037308 1038570 . + . ID=Thaps268480;biotype=protein_coding;description=Geranylgeranyl pyrophosphate synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BXV9];external_name=GGPS1;logic_name=jgi_thaps3 chr3 ensembl transcript 1037308 1038570 . + . ID=Thaps268480;Parent=Thaps268480;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1037308 1037745 . + 0 ID=Thaps268480;Parent=Thaps268480;rank=1 chr3 . exon 1037308 1037745 . + . ID=Thaps268480.1;Parent=Thaps268480;constitutive=1;rank=1 chr3 . CDS 1037989 1038570 . + 0 ID=Thaps268480;Parent=Thaps268480;rank=2 chr3 . exon 1037989 1038570 . + . ID=Thaps268480.2;Parent=Thaps268480;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 1039395 1041010 . + . ID=Thaps268481;biotype=protein_coding;description=Putative uncharacterized protein HSF11 [Source:UniProtKB/TrEMBL%3BAcc:B8BXW0];external_name=HSF11;logic_name=jgi_thaps3 chr3 ensembl transcript 1039395 1041010 . + . ID=Thaps268481;Parent=Thaps268481;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1039395 1039739 . + 0 ID=Thaps268481;Parent=Thaps268481;rank=1 chr3 . exon 1039395 1039739 . + . ID=Thaps268481.1;Parent=Thaps268481;constitutive=1;rank=1 chr3 . CDS 1039819 1040034 . + 0 ID=Thaps268481;Parent=Thaps268481;rank=2 chr3 . exon 1039819 1040034 . + . ID=Thaps268481.2;Parent=Thaps268481;constitutive=1;rank=2 chr3 . CDS 1040123 1041010 . + 0 ID=Thaps268481;Parent=Thaps268481;rank=3 chr3 . exon 1040123 1041010 . + . ID=Thaps268481.3;Parent=Thaps268481;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1042797 1043957 . + . ID=Thaps39901;biotype=protein_coding;description=Phosphoglycerate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BXW2];external_name=PGK1;logic_name=jgi_thaps3 chr3 ensembl transcript 1042797 1043957 . + . ID=Thaps39901;Parent=Thaps39901;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1042797 1043957 . + 0 ID=Thaps39901;Parent=Thaps39901;rank=1 chr3 . exon 1042797 1043957 . + . ID=Thaps39901.1;Parent=Thaps39901;constitutive=1;rank=1 chr3 . repeat_region 1046417 1046424 . ? . description=dust chr3 . repeat_region 1046817 1046838 . ? . description=trf chr3 . repeat_region 1046817 1046838 . ? . description=dust chr3 ensembl protein_coding_gene 1047029 1050961 . + . ID=Thaps21769;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXW4];external_name=Thaps21769;logic_name=jgi_thaps3 chr3 ensembl transcript 1047029 1050961 . + . ID=Thaps21769;Parent=Thaps21769;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1047029 1050961 . + 0 ID=Thaps21769;Parent=Thaps21769;rank=1 chr3 . exon 1047029 1050961 . + . ID=Thaps21769.1;Parent=Thaps21769;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1051547 1052863 . - . ID=Thaps21770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXW5];external_name=Thaps21770;logic_name=jgi_thaps3 chr3 ensembl transcript 1051547 1052863 . - . ID=Thaps21770;Parent=Thaps21770;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1051547 1052863 . - 0 ID=Thaps21770;Parent=Thaps21770;rank=1 chr3 . exon 1051547 1052863 . - . ID=Thaps21770.1;Parent=Thaps21770;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1053926 1055456 . - . ID=Thaps32546;biotype=protein_coding;description=Probable microsomal delta-5 desaturase [Source:UniProtKB/TrEMBL%3BAcc:B8BXW6];external_name=DES1;logic_name=jgi_thaps3 chr3 ensembl transcript 1053926 1055456 . - . ID=Thaps32546;Parent=Thaps32546;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1053926 1055045 . - 0 ID=Thaps32546;Parent=Thaps32546;rank=2 chr3 . exon 1053926 1055045 . - . ID=Thaps32546.2;Parent=Thaps32546;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1055146 1055456 . - 0 ID=Thaps32546;Parent=Thaps32546;rank=1 chr3 . exon 1055146 1055456 . - . ID=Thaps32546.1;Parent=Thaps32546;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1062664 1064267 . + . ID=Thaps21771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXX0];external_name=Thaps21771;logic_name=jgi_thaps3 chr3 ensembl transcript 1062664 1064267 . + . ID=Thaps21771;Parent=Thaps21771;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1062664 1062763 . + 0 ID=Thaps21771;Parent=Thaps21771;rank=1 chr3 . exon 1062664 1062763 . + . ID=Thaps21771.1;Parent=Thaps21771;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1062882 1062959 . + 0 ID=Thaps21771;Parent=Thaps21771;rank=2 chr3 . exon 1062882 1062959 . + . ID=Thaps21771.2;Parent=Thaps21771;constitutive=1;rank=2 chr3 . CDS 1063082 1063166 . + 0 ID=Thaps21771;Parent=Thaps21771;rank=3 chr3 . exon 1063082 1063166 . + . ID=Thaps21771.3;Parent=Thaps21771;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1063263 1063309 . + 0 ID=Thaps21771;Parent=Thaps21771;rank=4 chr3 . exon 1063263 1063309 . + . ID=Thaps21771.4;Parent=Thaps21771;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1063415 1063520 . + 0 ID=Thaps21771;Parent=Thaps21771;rank=5 chr3 . exon 1063415 1063520 . + . ID=Thaps21771.5;Parent=Thaps21771;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1063621 1063732 . + 0 ID=Thaps21771;Parent=Thaps21771;rank=6 chr3 . exon 1063621 1063732 . + . ID=Thaps21771.6;Parent=Thaps21771;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 1063833 1064267 . + 0 ID=Thaps21771;Parent=Thaps21771;rank=7 chr3 . exon 1063833 1064267 . + . ID=Thaps21771.7;Parent=Thaps21771;constitutive=1;rank=7 chr3 ensembl protein_coding_gene 1057467 1058444 . + . ID=Thaps261802;biotype=protein_coding;description=Aldo-keto oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8BXW8];external_name=Thaps261802;logic_name=jgi_thaps3 chr3 ensembl transcript 1057467 1058444 . + . ID=Thaps261802;Parent=Thaps261802;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1057467 1057821 . + 0 ID=Thaps261802;Parent=Thaps261802;rank=1 chr3 . exon 1057467 1057821 . + . ID=Thaps261802.1;Parent=Thaps261802;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1057954 1058187 . + 0 ID=Thaps261802;Parent=Thaps261802;rank=2 chr3 . exon 1057954 1058187 . + . ID=Thaps261802.2;Parent=Thaps261802;constitutive=1;rank=2 chr3 . CDS 1058218 1058444 . + 0 ID=Thaps261802;Parent=Thaps261802;rank=3 chr3 . exon 1058218 1058444 . + . ID=Thaps261802.3;Parent=Thaps261802;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1065270 1066445 . + . ID=Thaps261803;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXX1];external_name=Thaps261803;logic_name=jgi_thaps3 chr3 ensembl transcript 1065270 1066445 . + . ID=Thaps261803;Parent=Thaps261803;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1065270 1065528 . + 0 ID=Thaps261803;Parent=Thaps261803;rank=1 chr3 . exon 1065270 1065528 . + . ID=Thaps261803.1;Parent=Thaps261803;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1065721 1065913 . + 0 ID=Thaps261803;Parent=Thaps261803;rank=2 chr3 . CDS 1066187 1066445 . + 0 ID=Thaps261803;Parent=Thaps261803;rank=3 chr3 ensembl protein_coding_gene 1055832 1057138 . - . ID=Thaps3477;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXW7];external_name=Thaps3477;logic_name=jgi_thaps3 chr3 ensembl transcript 1055832 1057138 . - . ID=Thaps3477;Parent=Thaps3477;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1055832 1056063 . - 0 ID=Thaps3477;Parent=Thaps3477;rank=5 chr3 . exon 1055832 1056063 . - . ID=Thaps3477.5;Parent=Thaps3477;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1056152 1056291 . - 0 ID=Thaps3477;Parent=Thaps3477;rank=4 chr3 . exon 1056152 1056291 . - . ID=Thaps3477.4;Parent=Thaps3477;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1056374 1056644 . - 0 ID=Thaps3477;Parent=Thaps3477;rank=3 chr3 . exon 1056374 1056644 . - . ID=Thaps3477.3;Parent=Thaps3477;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1056742 1057055 . - 0 ID=Thaps3477;Parent=Thaps3477;rank=2 chr3 . exon 1056742 1057055 . - . ID=Thaps3477.2;Parent=Thaps3477;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1057136 1057138 . - 0 ID=Thaps3477;Parent=Thaps3477;rank=1 chr3 . exon 1057136 1057138 . - . ID=Thaps3477.1;Parent=Thaps3477;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1060993 1061862 . - . ID=Thaps3478;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXW9];external_name=Thaps3478;logic_name=jgi_thaps3 chr3 ensembl transcript 1060993 1061862 . - . ID=Thaps3478;Parent=Thaps3478;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1060993 1061862 . - 0 ID=Thaps3478;Parent=Thaps3478;rank=1 chr3 . exon 1060993 1061862 . - . ID=Thaps3478.1;Parent=Thaps3478;constitutive=1;rank=1 chr3 . repeat_region 1067029 1067099 . + . description=TE2c_TP chr3 . repeat_region 1067118 1067252 . + . description=TE2c_TP chr3 . repeat_region 1067899 1067942 . ? . description=trf chr3 . repeat_region 1068025 1068282 . ? . description=trf chr3 . repeat_region 1068139 1068197 . ? . description=trf chr3 . repeat_region 1068141 1068205 . ? . description=trf chr3 . repeat_region 1068283 1068517 . ? . description=trf chr3 . repeat_region 1068343 1068501 . ? . description=trf chr3 . repeat_region 1068382 1068472 . ? . description=trf chr3 . repeat_region 1069007 1069225 . - . description=tp13_ASNotSingleton chr3 . repeat_region 1069703 1069977 . + . description=TE2c_TP chr3 . exon 1065721 1065913 . + . ID=Thaps261803.2;Parent=Thaps261803;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . exon 1066187 1066445 . + . ID=Thaps261803.3;Parent=Thaps261803;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl gene 1068085 1069698 . - . ID=Thaps261804;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 1068085 1069698 . - . ID=Thaps261804;Parent=Thaps261804;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 1068085 1068104 . - . ID=Thaps261804.4;Parent=Thaps261804;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . exon 1068625 1068876 . - . ID=Thaps261804.3;Parent=Thaps261804;constitutive=1;rank=3 chr3 . exon 1069012 1069576 . - . ID=Thaps261804.2;Parent=Thaps261804;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . exon 1069577 1069698 . - . ID=Thaps261804.1;Parent=Thaps261804;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1075370 1075726 . + . ID=Thaps32752;biotype=protein_coding;description=RL24%2C ribosomal protein 24 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BXX5];external_name=RL24;logic_name=jgi_thaps3 chr3 ensembl transcript 1075370 1075726 . + . ID=Thaps32752;Parent=Thaps32752;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1075370 1075726 . + 0 ID=Thaps32752;Parent=Thaps32752;rank=1 chr3 . exon 1075370 1075726 . + . ID=Thaps32752.1;Parent=Thaps32752;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1070149 1071111 . + . ID=Thaps3481;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXX2];external_name=Thaps3481;logic_name=jgi_thaps3 chr3 ensembl transcript 1070149 1071111 . + . ID=Thaps3481;Parent=Thaps3481;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1070149 1070215 . + 0 ID=Thaps3481;Parent=Thaps3481;rank=1 chr3 . exon 1070149 1070215 . + . ID=Thaps3481.1;Parent=Thaps3481;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1070335 1070378 . + 0 ID=Thaps3481;Parent=Thaps3481;rank=2 chr3 . exon 1070335 1070378 . + . ID=Thaps3481.2;Parent=Thaps3481;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1070416 1070566 . + 0 ID=Thaps3481;Parent=Thaps3481;rank=3 chr3 . exon 1070416 1070566 . + . ID=Thaps3481.3;Parent=Thaps3481;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1070677 1070746 . + 0 ID=Thaps3481;Parent=Thaps3481;rank=4 chr3 . exon 1070677 1070746 . + . ID=Thaps3481.4;Parent=Thaps3481;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1070858 1070894 . + 0 ID=Thaps3481;Parent=Thaps3481;rank=5 chr3 . exon 1070858 1070894 . + . ID=Thaps3481.5;Parent=Thaps3481;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1070971 1071111 . + 0 ID=Thaps3481;Parent=Thaps3481;rank=6 chr3 . exon 1070971 1071111 . + . ID=Thaps3481.6;Parent=Thaps3481;constitutive=1;rank=6 chr3 ensembl protein_coding_gene 1072489 1073355 . + . ID=Thaps3482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXX3];external_name=Thaps3482;logic_name=jgi_thaps3 chr3 ensembl transcript 1072489 1073355 . + . ID=Thaps3482;Parent=Thaps3482;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1072489 1073355 . + 0 ID=Thaps3482;Parent=Thaps3482;rank=1 chr3 . exon 1072489 1073355 . + . ID=Thaps3482.1;Parent=Thaps3482;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1073499 1074251 . - . ID=Thaps3483;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXX4];external_name=Thaps3483;logic_name=jgi_thaps3 chr3 ensembl transcript 1073499 1074251 . - . ID=Thaps3483;Parent=Thaps3483;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1073499 1074251 . - 0 ID=Thaps3483;Parent=Thaps3483;rank=1 chr3 . exon 1073499 1074251 . - . ID=Thaps3483.1;Parent=Thaps3483;constitutive=1;rank=1 chr3 . repeat_region 1079078 1079138 . ? . description=dust chr3 . repeat_region 1081102 1081123 . ? . description=dust chr3 . repeat_region 1081804 1081827 . ? . description=dust chr3 ensembl protein_coding_gene 1076363 1077388 . + . ID=Thaps15161;biotype=protein_coding;description=Histone acetyl transferase%2C gcn5-related [Source:UniProtKB/TrEMBL%3BAcc:B8BXX6];external_name=Thaps15161;logic_name=jgi_thaps3 chr3 ensembl transcript 1076363 1077388 . + . ID=Thaps15161;Parent=Thaps15161;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1076363 1077388 . + 0 ID=Thaps15161;Parent=Thaps15161;rank=1 chr3 . exon 1076363 1077388 . + . ID=Thaps15161.1;Parent=Thaps15161;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1080116 1080304 . - . ID=Thaps32557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXX9];external_name=Thaps32557;logic_name=jgi_thaps3 chr3 ensembl transcript 1080116 1080304 . - . ID=Thaps32557;Parent=Thaps32557;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1080116 1080304 . - 0 ID=Thaps32557;Parent=Thaps32557;rank=1 chr3 . exon 1080116 1080304 . - . ID=Thaps32557.1;Parent=Thaps32557;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1077562 1079013 . - . ID=Thaps3486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXX7];external_name=Thaps3486;logic_name=jgi_thaps3 chr3 ensembl transcript 1077562 1079013 . - . ID=Thaps3486;Parent=Thaps3486;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1077562 1079013 . - 0 ID=Thaps3486;Parent=Thaps3486;rank=1 chr3 . exon 1077562 1079013 . - . ID=Thaps3486.1;Parent=Thaps3486;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1079254 1079770 . + . ID=Thaps3487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXX8];external_name=Thaps3487;logic_name=jgi_thaps3 chr3 ensembl transcript 1079254 1079770 . + . ID=Thaps3487;Parent=Thaps3487;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1079254 1079464 . + 0 ID=Thaps3487;Parent=Thaps3487;rank=1 chr3 . exon 1079254 1079464 . + . ID=Thaps3487.1;Parent=Thaps3487;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1079586 1079770 . + 0 ID=Thaps3487;Parent=Thaps3487;rank=2 chr3 . exon 1079586 1079770 . + . ID=Thaps3487.2;Parent=Thaps3487;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . repeat_region 1091429 1091455 . ? . description=trf chr3 ensembl protein_coding_gene 1086245 1090515 . + . ID=Thaps21774;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXY0];external_name=Thaps21774;logic_name=jgi_thaps3 chr3 ensembl transcript 1086245 1090515 . + . ID=Thaps21774;Parent=Thaps21774;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1086245 1086569 . + 0 ID=Thaps21774;Parent=Thaps21774;rank=1 chr3 . exon 1086245 1086569 . + . ID=Thaps21774.1;Parent=Thaps21774;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1086692 1086726 . + 0 ID=Thaps21774;Parent=Thaps21774;rank=2 chr3 . exon 1086692 1086726 . + . ID=Thaps21774.2;Parent=Thaps21774;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1086834 1086958 . + 0 ID=Thaps21774;Parent=Thaps21774;rank=3 chr3 . exon 1086834 1086958 . + . ID=Thaps21774.3;Parent=Thaps21774;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1087126 1087450 . + 0 ID=Thaps21774;Parent=Thaps21774;rank=4 chr3 . exon 1087126 1087450 . + . ID=Thaps21774.4;Parent=Thaps21774;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1087527 1087793 . + 0 ID=Thaps21774;Parent=Thaps21774;rank=5 chr3 . exon 1087527 1087793 . + . ID=Thaps21774.5;Parent=Thaps21774;constitutive=1;rank=5 chr3 . CDS 1087882 1090515 . + 0 ID=Thaps21774;Parent=Thaps21774;rank=6 chr3 . exon 1087882 1090515 . + . ID=Thaps21774.6;Parent=Thaps21774;constitutive=1;rank=6 chr3 ensembl protein_coding_gene 1093994 1094425 . - . ID=Thaps261808;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXY2];external_name=Thaps261808;logic_name=jgi_thaps3 chr3 ensembl transcript 1093994 1094425 . - . ID=Thaps261808;Parent=Thaps261808;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1093994 1094425 . - 0 ID=Thaps261808;Parent=Thaps261808;rank=1 chr3 . exon 1093994 1094425 . - . ID=Thaps261808.1;Parent=Thaps261808;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1091455 1093597 . + . ID=Thaps268486;biotype=protein_coding;description=Mannosyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BXY1];external_name=Thaps268486;logic_name=jgi_thaps3 chr3 ensembl transcript 1091455 1093597 . + . ID=Thaps268486;Parent=Thaps268486;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1091455 1091606 . + 0 ID=Thaps268486;Parent=Thaps268486;rank=1 chr3 . exon 1091455 1091606 . + . ID=Thaps268486.1;Parent=Thaps268486;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1091875 1091947 . + 0 ID=Thaps268486;Parent=Thaps268486;rank=2 chr3 . exon 1091875 1091947 . + . ID=Thaps268486.2;Parent=Thaps268486;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1092041 1092419 . + 0 ID=Thaps268486;Parent=Thaps268486;rank=3 chr3 . exon 1092041 1092419 . + . ID=Thaps268486.3;Parent=Thaps268486;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1092492 1093597 . + 0 ID=Thaps268486;Parent=Thaps268486;rank=4 chr3 . exon 1092492 1093597 . + . ID=Thaps268486.4;Parent=Thaps268486;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 1095054 1097795 . + . ID=Thaps3493;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXY3];external_name=Thaps3493;logic_name=jgi_thaps3 chr3 ensembl transcript 1095054 1097795 . + . ID=Thaps3493;Parent=Thaps3493;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1095054 1097795 . + 0 ID=Thaps3493;Parent=Thaps3493;rank=1 chr3 . exon 1095054 1097795 . + . ID=Thaps3493.1;Parent=Thaps3493;constitutive=1;rank=1 chr3 . repeat_region 1099708 1099758 . ? . description=dust chr3 . repeat_region 1100240 1100265 . ? . description=dust chr3 ensembl protein_coding_gene 1101393 1102793 . + . ID=Thaps21776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXY5];external_name=Thaps21776;logic_name=jgi_thaps3 chr3 ensembl transcript 1101393 1102793 . + . ID=Thaps21776;Parent=Thaps21776;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1101393 1102793 . + 0 ID=Thaps21776;Parent=Thaps21776;rank=1 chr3 . exon 1101393 1102793 . + . ID=Thaps21776.1;Parent=Thaps21776;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1104415 1105822 . + . ID=Thaps268488;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXY6];external_name=Thaps268488;logic_name=jgi_thaps3 chr3 ensembl transcript 1104415 1105822 . + . ID=Thaps268488;Parent=Thaps268488;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1104415 1104539 . + 0 ID=Thaps268488;Parent=Thaps268488;rank=1 chr3 . exon 1104415 1104539 . + . ID=Thaps268488.1;Parent=Thaps268488;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1104622 1105822 . + 0 ID=Thaps268488;Parent=Thaps268488;rank=2 chr3 . exon 1104622 1105822 . + . ID=Thaps268488.2;Parent=Thaps268488;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1097844 1100644 . - . ID=Thaps3494;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXY4];external_name=Thaps3494;logic_name=jgi_thaps3 chr3 ensembl transcript 1097844 1100644 . - . ID=Thaps3494;Parent=Thaps3494;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1097844 1098814 . - 0 ID=Thaps3494;Parent=Thaps3494;rank=2 chr3 . exon 1097844 1098814 . - . ID=Thaps3494.2;Parent=Thaps3494;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1098838 1100644 . - 0 ID=Thaps3494;Parent=Thaps3494;rank=1 chr3 . exon 1098838 1100644 . - . ID=Thaps3494.1;Parent=Thaps3494;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 1106238 1107613 . + . description=TE2_TP chr3 . repeat_region 1106529 1106558 . ? . description=trf chr3 . repeat_region 1107174 1107253 . ? . description=trf chr3 . repeat_region 1107188 1107259 . ? . description=trf chr3 . repeat_region 1107294 1107406 . ? . description=trf chr3 . repeat_region 1112644 1112679 . ? . description=trf chr3 . repeat_region 1114744 1114795 . ? . description=trf chr3 ensembl protein_coding_gene 1107682 1110348 . + . ID=Thaps21778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXY7];external_name=Thaps21778;logic_name=jgi_thaps3 chr3 ensembl transcript 1107682 1110348 . + . ID=Thaps21778;Parent=Thaps21778;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1107682 1110348 . + 0 ID=Thaps21778;Parent=Thaps21778;rank=1 chr3 . exon 1107682 1110348 . + . ID=Thaps21778.1;Parent=Thaps21778;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1110563 1113212 . + . ID=Thaps21779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXY8];external_name=Thaps21779;logic_name=jgi_thaps3 chr3 ensembl transcript 1110563 1113212 . + . ID=Thaps21779;Parent=Thaps21779;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1110563 1110984 . + 0 ID=Thaps21779;Parent=Thaps21779;rank=1 chr3 . exon 1110563 1110984 . + . ID=Thaps21779.1;Parent=Thaps21779;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1111069 1112637 . + 0 ID=Thaps21779;Parent=Thaps21779;rank=2 chr3 . exon 1111069 1112637 . + . ID=Thaps21779.2;Parent=Thaps21779;constitutive=1;rank=2 chr3 . CDS 1112741 1113003 . + 0 ID=Thaps21779;Parent=Thaps21779;rank=3 chr3 . exon 1112741 1113003 . + . ID=Thaps21779.3;Parent=Thaps21779;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1113088 1113212 . + 0 ID=Thaps21779;Parent=Thaps21779;rank=4 chr3 . exon 1113088 1113212 . + . ID=Thaps21779.4;Parent=Thaps21779;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 1114755 1116068 . + . ID=Thaps3500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ0];external_name=Thaps3500;logic_name=jgi_thaps3 chr3 ensembl transcript 1114755 1116068 . + . ID=Thaps3500;Parent=Thaps3500;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1114755 1115028 . + 0 ID=Thaps3500;Parent=Thaps3500;rank=1 chr3 . exon 1114755 1115028 . + . ID=Thaps3500.1;Parent=Thaps3500;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1115107 1116068 . + 0 ID=Thaps3500;Parent=Thaps3500;rank=2 chr3 . exon 1115107 1116068 . + . ID=Thaps3500.2;Parent=Thaps3500;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 1113462 1114373 . - . ID=Thaps39913;biotype=protein_coding;description=Coatomer protein subunit epsilon [Source:UniProtKB/TrEMBL%3BAcc:B8BXY9];external_name=COP6;logic_name=jgi_thaps3 chr3 ensembl transcript 1113462 1114373 . - . ID=Thaps39913;Parent=Thaps39913;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1113462 1114373 . - 0 ID=Thaps39913;Parent=Thaps39913;rank=1 chr3 . exon 1113462 1114373 . - . ID=Thaps39913.1;Parent=Thaps39913;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1116274 1117293 . - . ID=Thaps16656;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ1];external_name=Thaps16656;logic_name=jgi_thaps3 chr3 ensembl transcript 1116274 1117293 . - . ID=Thaps16656;Parent=Thaps16656;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1116274 1116792 . - 0 ID=Thaps16656;Parent=Thaps16656;rank=3 chr3 . exon 1116274 1116792 . - . ID=Thaps16656.3;Parent=Thaps16656;constitutive=1;rank=3 chr3 . CDS 1116883 1117062 . - 0 ID=Thaps16656;Parent=Thaps16656;rank=2 chr3 . exon 1116883 1117062 . - . ID=Thaps16656.2;Parent=Thaps16656;constitutive=1;rank=2 chr3 . CDS 1117102 1117293 . - 0 ID=Thaps16656;Parent=Thaps16656;rank=1 chr3 . exon 1117102 1117293 . - . ID=Thaps16656.1;Parent=Thaps16656;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1124234 1124689 . + . ID=Thaps21781;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ4];external_name=Thaps21781;logic_name=jgi_thaps3 chr3 ensembl transcript 1124234 1124689 . + . ID=Thaps21781;Parent=Thaps21781;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1124234 1124689 . + 0 ID=Thaps21781;Parent=Thaps21781;rank=1 chr3 . exon 1124234 1124689 . + . ID=Thaps21781.1;Parent=Thaps21781;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1125063 1125686 . - . ID=Thaps261817;biotype=protein_coding;description=1-acyl-sn-glycerol-3-phosphate acyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ5];external_name=Thaps261817;logic_name=jgi_thaps3 chr3 ensembl transcript 1125063 1125686 . - . ID=Thaps261817;Parent=Thaps261817;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1125063 1125587 . - 0 ID=Thaps261817;Parent=Thaps261817;rank=2 chr3 . exon 1125063 1125587 . - . ID=Thaps261817.2;Parent=Thaps261817;constitutive=1;rank=2 chr3 . CDS 1125609 1125686 . - 0 ID=Thaps261817;Parent=Thaps261817;rank=1 chr3 ensembl protein_coding_gene 1122197 1123312 . + . ID=Thaps33256;biotype=protein_coding;description=Anion transporting ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ3];external_name=Thaps33256;logic_name=jgi_thaps3 chr3 ensembl transcript 1122197 1123312 . + . ID=Thaps33256;Parent=Thaps33256;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1122197 1122471 . + 0 ID=Thaps33256;Parent=Thaps33256;rank=1 chr3 . exon 1122197 1122471 . + . ID=Thaps33256.1;Parent=Thaps33256;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1122529 1123046 . + 0 ID=Thaps33256;Parent=Thaps33256;rank=2 chr3 . exon 1122529 1123046 . + . ID=Thaps33256.2;Parent=Thaps33256;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1123137 1123312 . + 0 ID=Thaps33256;Parent=Thaps33256;rank=3 chr3 . exon 1123137 1123312 . + . ID=Thaps33256.3;Parent=Thaps33256;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1119183 1121827 . - . ID=Thaps3502;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ2];external_name=Thaps3502;logic_name=jgi_thaps3 chr3 ensembl transcript 1119183 1121827 . - . ID=Thaps3502;Parent=Thaps3502;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1119183 1119545 . - 0 ID=Thaps3502;Parent=Thaps3502;rank=3 chr3 . exon 1119183 1119545 . - . ID=Thaps3502.3;Parent=Thaps3502;constitutive=1;rank=3 chr3 . CDS 1119762 1119915 . - 0 ID=Thaps3502;Parent=Thaps3502;rank=2 chr3 . exon 1119762 1119915 . - . ID=Thaps3502.2;Parent=Thaps3502;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1119996 1121827 . - 0 ID=Thaps3502;Parent=Thaps3502;rank=1 chr3 . exon 1119996 1121827 . - . ID=Thaps3502.1;Parent=Thaps3502;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . exon 1125609 1125686 . - . ID=Thaps261817.1;Parent=Thaps261817;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1128099 1129207 . + . ID=Thaps268493;biotype=protein_coding;description=3-oxoacyl-reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ7];external_name=KAR1;logic_name=jgi_thaps3 chr3 ensembl transcript 1128099 1129207 . + . ID=Thaps268493;Parent=Thaps268493;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1128099 1128196 . + 0 ID=Thaps268493;Parent=Thaps268493;rank=1 chr3 . exon 1128099 1128196 . + . ID=Thaps268493.1;Parent=Thaps268493;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1128305 1128855 . + 0 ID=Thaps268493;Parent=Thaps268493;rank=2 chr3 . exon 1128305 1128855 . + . ID=Thaps268493.2;Parent=Thaps268493;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1129020 1129207 . + 0 ID=Thaps268493;Parent=Thaps268493;rank=3 chr3 . exon 1129020 1129207 . + . ID=Thaps268493.3;Parent=Thaps268493;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1133849 1134475 . - . ID=Thaps32899;biotype=protein_coding;description=Channel protein of hemolysin III family [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ9];external_name=Thaps32899;logic_name=jgi_thaps3 chr3 ensembl transcript 1133849 1134475 . - . ID=Thaps32899;Parent=Thaps32899;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1133849 1134475 . - 0 ID=Thaps32899;Parent=Thaps32899;rank=1 chr3 . exon 1133849 1134475 . - . ID=Thaps32899.1;Parent=Thaps32899;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1126610 1127851 . + . ID=Thaps3506;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ6];external_name=Thaps3506;logic_name=jgi_thaps3 chr3 ensembl transcript 1126610 1127851 . + . ID=Thaps3506;Parent=Thaps3506;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1126610 1127851 . + 0 ID=Thaps3506;Parent=Thaps3506;rank=1 chr3 . exon 1126610 1127851 . + . ID=Thaps3506.1;Parent=Thaps3506;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1129888 1133379 . - . ID=Thaps3508;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BXZ8];external_name=Thaps3508;logic_name=jgi_thaps3 chr3 ensembl transcript 1129888 1133379 . - . ID=Thaps3508;Parent=Thaps3508;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1129888 1129913 . - 0 ID=Thaps3508;Parent=Thaps3508;rank=3 chr3 . exon 1129888 1129913 . - . ID=Thaps3508.3;Parent=Thaps3508;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1130032 1132606 . - 0 ID=Thaps3508;Parent=Thaps3508;rank=2 chr3 . exon 1130032 1132606 . - . ID=Thaps3508.2;Parent=Thaps3508;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1132687 1133379 . - 0 ID=Thaps3508;Parent=Thaps3508;rank=1 chr3 . exon 1132687 1133379 . - . ID=Thaps3508.1;Parent=Thaps3508;constitutive=1;rank=1 chr3 . repeat_region 1135549 1135584 . ? . description=trf chr3 . repeat_region 1143100 1143108 . ? . description=dust chr3 . repeat_region 1144185 1144216 . ? . description=trf chr3 ensembl tRNA_gene 1135626 1135698 . - . ID=EPrTPOG00000000106;biotype=tRNA;description=tRNA-Glu for anticodon UUC [Source:TRNASCAN_SE%3BAcc:tRNA-Glu];external_name=tRNA-Glu;logic_name=ncrna_eg chr3 ensembl transcript 1135626 1135698 . - . ID=EPrTPOT00000000106;Parent=EPrTPOG00000000106;biotype=tRNA;logic_name=ncrna_eg chr3 . exon 1135626 1135698 . - . ID=EPrTPOE00000000106;Parent=EPrTPOT00000000106;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1139310 1141148 . + . ID=Thaps21784;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY01];external_name=Thaps21784;logic_name=jgi_thaps3 chr3 ensembl transcript 1139310 1141148 . + . ID=Thaps21784;Parent=Thaps21784;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1139310 1140601 . + 0 ID=Thaps21784;Parent=Thaps21784;rank=1 chr3 . exon 1139310 1140601 . + . ID=Thaps21784.1;Parent=Thaps21784;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1140683 1140951 . + 0 ID=Thaps21784;Parent=Thaps21784;rank=2 chr3 . exon 1140683 1140951 . + . ID=Thaps21784.2;Parent=Thaps21784;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1141024 1141148 . + 0 ID=Thaps21784;Parent=Thaps21784;rank=3 chr3 . exon 1141024 1141148 . + . ID=Thaps21784.3;Parent=Thaps21784;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1141596 1142907 . - . ID=Thaps21785;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY02];external_name=Thaps21785;logic_name=jgi_thaps3 chr3 ensembl transcript 1141596 1142907 . - . ID=Thaps21785;Parent=Thaps21785;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1141596 1142590 . - 0 ID=Thaps21785;Parent=Thaps21785;rank=3 chr3 . exon 1141596 1142590 . - . ID=Thaps21785.3;Parent=Thaps21785;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1142688 1142719 . - 0 ID=Thaps21785;Parent=Thaps21785;rank=2 chr3 . exon 1142688 1142719 . - . ID=Thaps21785.2;Parent=Thaps21785;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1142807 1142907 . - 0 ID=Thaps21785;Parent=Thaps21785;rank=1 chr3 . exon 1142807 1142907 . - . ID=Thaps21785.1;Parent=Thaps21785;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1137133 1138509 . - . ID=Thaps261820;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY00];external_name=Thaps261820;logic_name=jgi_thaps3 chr3 ensembl transcript 1137133 1138509 . - . ID=Thaps261820;Parent=Thaps261820;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1137133 1137176 . - 0 ID=Thaps261820;Parent=Thaps261820;rank=6 chr3 . exon 1137133 1137176 . - . ID=Thaps261820.6;Parent=Thaps261820;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 1137258 1137464 . - 0 ID=Thaps261820;Parent=Thaps261820;rank=5 chr3 . exon 1137258 1137464 . - . ID=Thaps261820.5;Parent=Thaps261820;constitutive=1;rank=5 chr3 . CDS 1137548 1137586 . - 0 ID=Thaps261820;Parent=Thaps261820;rank=4 chr3 . exon 1137548 1137586 . - . ID=Thaps261820.4;Parent=Thaps261820;constitutive=1;rank=4 chr3 . CDS 1137669 1137869 . - 0 ID=Thaps261820;Parent=Thaps261820;rank=3 chr3 . exon 1137669 1137869 . - . ID=Thaps261820.3;Parent=Thaps261820;constitutive=1;rank=3 chr3 . CDS 1137897 1138146 . - 0 ID=Thaps261820;Parent=Thaps261820;rank=2 chr3 . exon 1137897 1138146 . - . ID=Thaps261820.2;Parent=Thaps261820;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1138283 1138509 . - 0 ID=Thaps261820;Parent=Thaps261820;rank=1 chr3 . exon 1138283 1138509 . - . ID=Thaps261820.1;Parent=Thaps261820;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1143540 1146035 . + . ID=Thaps39924;biotype=protein_coding;description=DNA topoisomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BY03];external_name=TOPOII_1;logic_name=jgi_thaps3 chr3 ensembl transcript 1143540 1146035 . + . ID=Thaps39924;Parent=Thaps39924;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1143540 1144015 . + 0 ID=Thaps39924;Parent=Thaps39924;rank=1 chr3 . exon 1143540 1144015 . + . ID=Thaps39924.1;Parent=Thaps39924;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1144289 1144593 . + 0 ID=Thaps39924;Parent=Thaps39924;rank=2 chr3 . exon 1144289 1144593 . + . ID=Thaps39924.2;Parent=Thaps39924;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1144741 1145756 . + 0 ID=Thaps39924;Parent=Thaps39924;rank=3 chr3 . exon 1144741 1145756 . + . ID=Thaps39924.3;Parent=Thaps39924;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1145796 1146035 . + 0 ID=Thaps39924;Parent=Thaps39924;rank=4 chr3 ensembl protein_coding_gene 1146099 1147676 . - . ID=Thaps21788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY04];external_name=Thaps21788;logic_name=jgi_thaps3 chr3 ensembl transcript 1146099 1147676 . - . ID=Thaps21788;Parent=Thaps21788;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1146099 1147676 . - 0 ID=Thaps21788;Parent=Thaps21788;rank=1 chr3 . exon 1146099 1147676 . - . ID=Thaps21788.1;Parent=Thaps21788;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1151344 1152665 . + . ID=Thaps21789;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY07];external_name=Thaps21789;logic_name=jgi_thaps3 chr3 ensembl transcript 1151344 1152665 . + . ID=Thaps21789;Parent=Thaps21789;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1151344 1151384 . + 0 ID=Thaps21789;Parent=Thaps21789;rank=1 chr3 . exon 1151344 1151384 . + . ID=Thaps21789.1;Parent=Thaps21789;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1151514 1151576 . + 0 ID=Thaps21789;Parent=Thaps21789;rank=2 chr3 . exon 1151514 1151576 . + . ID=Thaps21789.2;Parent=Thaps21789;constitutive=1;rank=2 chr3 . CDS 1151663 1152665 . + 0 ID=Thaps21789;Parent=Thaps21789;rank=3 chr3 . exon 1151663 1152665 . + . ID=Thaps21789.3;Parent=Thaps21789;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 1152896 1153378 . + . ID=Thaps33241;biotype=protein_coding;description=RL17%2C ribosomal protein 17-like 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BY08];external_name=RL17;logic_name=jgi_thaps3 chr3 ensembl transcript 1152896 1153378 . + . ID=Thaps33241;Parent=Thaps33241;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1152896 1153378 . + 0 ID=Thaps33241;Parent=Thaps33241;rank=1 chr3 . exon 1152896 1153378 . + . ID=Thaps33241.1;Parent=Thaps33241;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1148183 1149088 . + . ID=Thaps3516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY05];external_name=Thaps3516;logic_name=jgi_thaps3 chr3 ensembl transcript 1148183 1149088 . + . ID=Thaps3516;Parent=Thaps3516;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1148183 1149088 . + 0 ID=Thaps3516;Parent=Thaps3516;rank=1 chr3 . exon 1148183 1149088 . + . ID=Thaps3516.1;Parent=Thaps3516;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1150423 1150923 . - . ID=Thaps3517;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY06];external_name=Thaps3517;logic_name=jgi_thaps3 chr3 ensembl transcript 1150423 1150923 . - . ID=Thaps3517;Parent=Thaps3517;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1150423 1150581 . - 0 ID=Thaps3517;Parent=Thaps3517;rank=2 chr3 . exon 1150423 1150581 . - . ID=Thaps3517.2;Parent=Thaps3517;constitutive=1;rank=2 chr3 . CDS 1150693 1150923 . - 0 ID=Thaps3517;Parent=Thaps3517;rank=1 chr3 . exon 1150693 1150923 . - . ID=Thaps3517.1;Parent=Thaps3517;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1153845 1155898 . - . ID=Thaps3520;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY09];external_name=Thaps3520;logic_name=jgi_thaps3 chr3 ensembl transcript 1153845 1155898 . - . ID=Thaps3520;Parent=Thaps3520;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1153845 1154027 . - 0 ID=Thaps3520;Parent=Thaps3520;rank=2 chr3 . exon 1153845 1154027 . - . ID=Thaps3520.2;Parent=Thaps3520;constitutive=1;rank=2 chr3 . CDS 1154120 1155898 . - 0 ID=Thaps3520;Parent=Thaps3520;rank=1 chr3 . exon 1154120 1155898 . - . ID=Thaps3520.1;Parent=Thaps3520;constitutive=1;rank=1 chr3 . exon 1145796 1146035 . + . ID=Thaps39924.4;Parent=Thaps39924;constitutive=1;rank=4 chr3 . repeat_region 1156149 1156171 . ? . description=dust chr3 . repeat_region 1159414 1159461 . ? . description=trf chr3 ensembl protein_coding_gene 1156256 1159381 . + . ID=Thaps21791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY10];external_name=Thaps21791;logic_name=jgi_thaps3 chr3 ensembl transcript 1156256 1159381 . + . ID=Thaps21791;Parent=Thaps21791;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1156256 1158058 . + 0 ID=Thaps21791;Parent=Thaps21791;rank=1 chr3 . exon 1156256 1158058 . + . ID=Thaps21791.1;Parent=Thaps21791;constitutive=1;rank=1 chr3 . CDS 1158158 1159381 . + 0 ID=Thaps21791;Parent=Thaps21791;rank=2 chr3 . exon 1158158 1159381 . + . ID=Thaps21791.2;Parent=Thaps21791;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 1160671 1162843 . - . ID=Thaps21792;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY11];external_name=Thaps21792;logic_name=jgi_thaps3 chr3 ensembl transcript 1160671 1162843 . - . ID=Thaps21792;Parent=Thaps21792;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1160671 1161814 . - 0 ID=Thaps21792;Parent=Thaps21792;rank=3 chr3 . exon 1160671 1161814 . - . ID=Thaps21792.3;Parent=Thaps21792;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1162063 1162214 . - 0 ID=Thaps21792;Parent=Thaps21792;rank=2 chr3 . exon 1162063 1162214 . - . ID=Thaps21792.2;Parent=Thaps21792;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1162322 1162843 . - 0 ID=Thaps21792;Parent=Thaps21792;rank=1 chr3 . exon 1162322 1162843 . - . ID=Thaps21792.1;Parent=Thaps21792;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1163499 1164325 . + . ID=Thaps261823;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY12];external_name=Thaps261823;logic_name=jgi_thaps3 chr3 ensembl transcript 1163499 1164325 . + . ID=Thaps261823;Parent=Thaps261823;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1163499 1163633 . + 0 ID=Thaps261823;Parent=Thaps261823;rank=1 chr3 . exon 1163499 1163633 . + . ID=Thaps261823.1;Parent=Thaps261823;constitutive=1;rank=1 chr3 . CDS 1163658 1163847 . + 0 ID=Thaps261823;Parent=Thaps261823;rank=2 chr3 . exon 1163658 1163847 . + . ID=Thaps261823.2;Parent=Thaps261823;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1163872 1164325 . + 0 ID=Thaps261823;Parent=Thaps261823;rank=3 chr3 . exon 1163872 1164325 . + . ID=Thaps261823.3;Parent=Thaps261823;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 1164429 1165186 . - . ID=Thaps3524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY13];external_name=Thaps3524;logic_name=jgi_thaps3 chr3 ensembl transcript 1164429 1165186 . - . ID=Thaps3524;Parent=Thaps3524;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1164429 1164783 . - 0 ID=Thaps3524;Parent=Thaps3524;rank=2 chr3 . exon 1164429 1164783 . - . ID=Thaps3524.2;Parent=Thaps3524;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1164861 1165186 . - 0 ID=Thaps3524;Parent=Thaps3524;rank=1 chr3 . exon 1164861 1165186 . - . ID=Thaps3524.1;Parent=Thaps3524;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1173279 1175535 . + . ID=Thaps21795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY17];external_name=Thaps21795;logic_name=jgi_thaps3 chr3 ensembl transcript 1173279 1175535 . + . ID=Thaps21795;Parent=Thaps21795;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1173279 1173542 . + 0 ID=Thaps21795;Parent=Thaps21795;rank=1 chr3 . exon 1173279 1173542 . + . ID=Thaps21795.1;Parent=Thaps21795;constitutive=1;rank=1 chr3 . CDS 1173686 1175056 . + 0 ID=Thaps21795;Parent=Thaps21795;rank=2 chr3 . exon 1173686 1175056 . + . ID=Thaps21795.2;Parent=Thaps21795;constitutive=1;rank=2 chr3 . CDS 1175139 1175227 . + 0 ID=Thaps21795;Parent=Thaps21795;rank=3 chr3 . exon 1175139 1175227 . + . ID=Thaps21795.3;Parent=Thaps21795;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1175311 1175393 . + 0 ID=Thaps21795;Parent=Thaps21795;rank=4 chr3 . CDS 1175501 1175535 . + 0 ID=Thaps21795;Parent=Thaps21795;rank=5 chr3 ensembl protein_coding_gene 1169235 1170204 . + . ID=Thaps261825;biotype=protein_coding;description=Trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8BY15];external_name=Thaps261825;logic_name=jgi_thaps3 chr3 ensembl transcript 1169235 1170204 . + . ID=Thaps261825;Parent=Thaps261825;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1169235 1169259 . + 0 ID=Thaps261825;Parent=Thaps261825;rank=1 chr3 . exon 1169235 1169259 . + . ID=Thaps261825.1;Parent=Thaps261825;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1169340 1169375 . + 0 ID=Thaps261825;Parent=Thaps261825;rank=2 chr3 . exon 1169340 1169375 . + . ID=Thaps261825.2;Parent=Thaps261825;constitutive=1;rank=2 chr3 . CDS 1169472 1169870 . + 0 ID=Thaps261825;Parent=Thaps261825;rank=3 chr3 . exon 1169472 1169870 . + . ID=Thaps261825.3;Parent=Thaps261825;constitutive=1;rank=3 chr3 . CDS 1169895 1169975 . + 0 ID=Thaps261825;Parent=Thaps261825;rank=4 chr3 . exon 1169895 1169975 . + . ID=Thaps261825.4;Parent=Thaps261825;constitutive=1;rank=4 chr3 . CDS 1170080 1170204 . + 0 ID=Thaps261825;Parent=Thaps261825;rank=5 chr3 . exon 1170080 1170204 . + . ID=Thaps261825.5;Parent=Thaps261825;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 1171783 1172429 . - . ID=Thaps261826;biotype=protein_coding;description=Sec14p-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY16];external_name=Thaps261826;logic_name=jgi_thaps3 chr3 ensembl transcript 1171783 1172429 . - . ID=Thaps261826;Parent=Thaps261826;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1171783 1172429 . - 0 ID=Thaps261826;Parent=Thaps261826;rank=1 chr3 . exon 1171783 1172429 . - . ID=Thaps261826.1;Parent=Thaps261826;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1165632 1167659 . + . ID=Thaps33194;biotype=protein_coding;description=Branched-chain amino acid aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BY14];external_name=BAT1;logic_name=jgi_thaps3 chr3 ensembl transcript 1165632 1167659 . + . ID=Thaps33194;Parent=Thaps33194;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1165632 1165939 . + 0 ID=Thaps33194;Parent=Thaps33194;rank=1 chr3 . exon 1165632 1165939 . + . ID=Thaps33194.1;Parent=Thaps33194;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1166135 1167333 . + 0 ID=Thaps33194;Parent=Thaps33194;rank=2 chr3 . exon 1166135 1167333 . + . ID=Thaps33194.2;Parent=Thaps33194;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1167397 1167659 . + 0 ID=Thaps33194;Parent=Thaps33194;rank=3 chr3 . exon 1167397 1167659 . + . ID=Thaps33194.3;Parent=Thaps33194;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . repeat_region 1184008 1184028 . ? . description=trf chr3 . exon 1175311 1175393 . + . ID=Thaps21795.4;Parent=Thaps21795;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . exon 1175501 1175535 . + . ID=Thaps21795.5;Parent=Thaps21795;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 1182009 1183505 . - . ID=Thaps21796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY20];external_name=Thaps21796;logic_name=jgi_thaps3 chr3 ensembl transcript 1182009 1183505 . - . ID=Thaps21796;Parent=Thaps21796;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1182009 1183505 . - 0 ID=Thaps21796;Parent=Thaps21796;rank=1 chr3 . exon 1182009 1183505 . - . ID=Thaps21796.1;Parent=Thaps21796;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1183984 1185372 . + . ID=Thaps21797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY21];external_name=Thaps21797;logic_name=jgi_thaps3 chr3 ensembl transcript 1183984 1185372 . + . ID=Thaps21797;Parent=Thaps21797;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1183984 1185372 . + 0 ID=Thaps21797;Parent=Thaps21797;rank=1 chr3 . exon 1183984 1185372 . + . ID=Thaps21797.1;Parent=Thaps21797;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1180870 1181232 . + . ID=Thaps261827;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY19];external_name=Thaps261827;logic_name=jgi_thaps3 chr3 ensembl transcript 1180870 1181232 . + . ID=Thaps261827;Parent=Thaps261827;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1180870 1181232 . + 0 ID=Thaps261827;Parent=Thaps261827;rank=1 chr3 . exon 1180870 1181232 . + . ID=Thaps261827.1;Parent=Thaps261827;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1177444 1179978 . + . ID=Thaps3529;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY18];external_name=Thaps3529;logic_name=jgi_thaps3 chr3 ensembl transcript 1177444 1179978 . + . ID=Thaps3529;Parent=Thaps3529;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1177444 1177658 . + 0 ID=Thaps3529;Parent=Thaps3529;rank=1 chr3 . exon 1177444 1177658 . + . ID=Thaps3529.1;Parent=Thaps3529;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1177788 1179505 . + 0 ID=Thaps3529;Parent=Thaps3529;rank=2 chr3 . exon 1177788 1179505 . + . ID=Thaps3529.2;Parent=Thaps3529;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1179563 1179978 . + 0 ID=Thaps3529;Parent=Thaps3529;rank=3 chr3 . exon 1179563 1179978 . + . ID=Thaps3529.3;Parent=Thaps3529;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . repeat_region 1185456 1185463 . ? . description=dust chr3 ensembl protein_coding_gene 1186117 1188498 . + . ID=Thaps21798;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY22];external_name=Thaps21798;logic_name=jgi_thaps3 chr3 ensembl transcript 1186117 1188498 . + . ID=Thaps21798;Parent=Thaps21798;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1186117 1186840 . + 0 ID=Thaps21798;Parent=Thaps21798;rank=1 chr3 . exon 1186117 1186840 . + . ID=Thaps21798.1;Parent=Thaps21798;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1186928 1188498 . + 0 ID=Thaps21798;Parent=Thaps21798;rank=2 chr3 . exon 1186928 1188498 . + . ID=Thaps21798.2;Parent=Thaps21798;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 1195118 1197343 . - . ID=Thaps21799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY25];external_name=Thaps21799;logic_name=jgi_thaps3 chr3 ensembl transcript 1195118 1197343 . - . ID=Thaps21799;Parent=Thaps21799;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1195118 1197343 . - 0 ID=Thaps21799;Parent=Thaps21799;rank=1 chr3 . exon 1195118 1197343 . - . ID=Thaps21799.1;Parent=Thaps21799;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1191369 1193214 . - . ID=Thaps261829;biotype=protein_coding;description=Probable atp-dependent DNA helicase Q5 [Source:UniProtKB/TrEMBL%3BAcc:B8BY24];external_name=DHC1_1;logic_name=jgi_thaps3 chr3 ensembl transcript 1191369 1193214 . - . ID=Thaps261829;Parent=Thaps261829;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1191369 1191434 . - 0 ID=Thaps261829;Parent=Thaps261829;rank=4 chr3 . exon 1191369 1191434 . - . ID=Thaps261829.4;Parent=Thaps261829;constitutive=1;rank=4 chr3 . CDS 1191528 1191580 . - 0 ID=Thaps261829;Parent=Thaps261829;rank=3 chr3 . exon 1191528 1191580 . - . ID=Thaps261829.3;Parent=Thaps261829;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1191673 1191716 . - 0 ID=Thaps261829;Parent=Thaps261829;rank=2 chr3 . exon 1191673 1191716 . - . ID=Thaps261829.2;Parent=Thaps261829;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1191833 1193214 . - 0 ID=Thaps261829;Parent=Thaps261829;rank=1 chr3 . exon 1191833 1193214 . - . ID=Thaps261829.1;Parent=Thaps261829;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1188595 1190336 . - . ID=Thaps32882;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY23];external_name=Thaps32882;logic_name=jgi_thaps3 chr3 ensembl transcript 1188595 1190336 . - . ID=Thaps32882;Parent=Thaps32882;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1188595 1188737 . - 0 ID=Thaps32882;Parent=Thaps32882;rank=4 chr3 . exon 1188595 1188737 . - . ID=Thaps32882.4;Parent=Thaps32882;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1188825 1189294 . - 0 ID=Thaps32882;Parent=Thaps32882;rank=3 chr3 . exon 1188825 1189294 . - . ID=Thaps32882.3;Parent=Thaps32882;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1189664 1189785 . - 0 ID=Thaps32882;Parent=Thaps32882;rank=2 chr3 . exon 1189664 1189785 . - . ID=Thaps32882.2;Parent=Thaps32882;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1189866 1190336 . - 0 ID=Thaps32882;Parent=Thaps32882;rank=1 chr3 . exon 1189866 1190336 . - . ID=Thaps32882.1;Parent=Thaps32882;constitutive=1;rank=1 chr3 . repeat_region 1198345 1198377 . ? . description=trf chr3 . repeat_region 1201316 1201339 . ? . description=trf chr3 ensembl protein_coding_gene 1204773 1208254 . + . ID=Thaps21800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY31];external_name=Thaps21800;logic_name=jgi_thaps3 chr3 ensembl transcript 1204773 1208254 . + . ID=Thaps21800;Parent=Thaps21800;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1204773 1204896 . + 0 ID=Thaps21800;Parent=Thaps21800;rank=1 chr3 . exon 1204773 1204896 . + . ID=Thaps21800.1;Parent=Thaps21800;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1204988 1206374 . + 0 ID=Thaps21800;Parent=Thaps21800;rank=2 chr3 . exon 1204988 1206374 . + . ID=Thaps21800.2;Parent=Thaps21800;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1206420 1206703 . + 0 ID=Thaps21800;Parent=Thaps21800;rank=3 chr3 . CDS 1206747 1207164 . + 0 ID=Thaps21800;Parent=Thaps21800;rank=4 chr3 . CDS 1207249 1208254 . + 0 ID=Thaps21800;Parent=Thaps21800;rank=5 chr3 ensembl protein_coding_gene 1202129 1203089 . - . ID=Thaps32827;biotype=protein_coding;description=Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BY29];external_name=Thaps32827;logic_name=jgi_thaps3 chr3 ensembl transcript 1202129 1203089 . - . ID=Thaps32827;Parent=Thaps32827;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1202129 1202623 . - 0 ID=Thaps32827;Parent=Thaps32827;rank=2 chr3 . exon 1202129 1202623 . - . ID=Thaps32827.2;Parent=Thaps32827;constitutive=1;rank=2 chr3 . CDS 1202721 1203089 . - 0 ID=Thaps32827;Parent=Thaps32827;rank=1 chr3 . exon 1202721 1203089 . - . ID=Thaps32827.1;Parent=Thaps32827;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1197919 1199279 . - . ID=Thaps3537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY26];external_name=Thaps3537;logic_name=jgi_thaps3 chr3 ensembl transcript 1197919 1199279 . - . ID=Thaps3537;Parent=Thaps3537;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1197919 1198149 . - 0 ID=Thaps3537;Parent=Thaps3537;rank=5 chr3 . exon 1197919 1198149 . - . ID=Thaps3537.5;Parent=Thaps3537;constitutive=1;rank=5 chr3 . CDS 1198212 1198323 . - 0 ID=Thaps3537;Parent=Thaps3537;rank=4 chr3 . exon 1198212 1198323 . - . ID=Thaps3537.4;Parent=Thaps3537;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1198410 1198698 . - 0 ID=Thaps3537;Parent=Thaps3537;rank=3 chr3 . exon 1198410 1198698 . - . ID=Thaps3537.3;Parent=Thaps3537;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1198803 1198832 . - 0 ID=Thaps3537;Parent=Thaps3537;rank=2 chr3 . exon 1198803 1198832 . - . ID=Thaps3537.2;Parent=Thaps3537;constitutive=1;rank=2 chr3 . CDS 1198940 1199279 . - 0 ID=Thaps3537;Parent=Thaps3537;rank=1 chr3 . exon 1198940 1199279 . - . ID=Thaps3537.1;Parent=Thaps3537;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1199805 1200600 . + . ID=Thaps3538;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY27];external_name=Thaps3538;logic_name=jgi_thaps3 chr3 ensembl transcript 1199805 1200600 . + . ID=Thaps3538;Parent=Thaps3538;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1199805 1200288 . + 0 ID=Thaps3538;Parent=Thaps3538;rank=1 chr3 . exon 1199805 1200288 . + . ID=Thaps3538.1;Parent=Thaps3538;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1200410 1200600 . + 0 ID=Thaps3538;Parent=Thaps3538;rank=2 chr3 . exon 1200410 1200600 . + . ID=Thaps3538.2;Parent=Thaps3538;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 1200759 1201799 . - . ID=Thaps3539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY28];external_name=Thaps3539;logic_name=jgi_thaps3 chr3 ensembl transcript 1200759 1201799 . - . ID=Thaps3539;Parent=Thaps3539;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1200759 1201799 . - 0 ID=Thaps3539;Parent=Thaps3539;rank=1 chr3 . exon 1200759 1201799 . - . ID=Thaps3539.1;Parent=Thaps3539;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1203466 1204068 . + . ID=Thaps3541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY30];external_name=Thaps3541;logic_name=jgi_thaps3 chr3 ensembl transcript 1203466 1204068 . + . ID=Thaps3541;Parent=Thaps3541;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1203466 1204068 . + 0 ID=Thaps3541;Parent=Thaps3541;rank=1 chr3 . exon 1203466 1204068 . + . ID=Thaps3541.1;Parent=Thaps3541;constitutive=1;rank=1 chr3 . exon 1206420 1206703 . + . ID=Thaps21800.3;Parent=Thaps21800;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . exon 1206747 1207164 . + . ID=Thaps21800.4;Parent=Thaps21800;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . exon 1207249 1208254 . + . ID=Thaps21800.5;Parent=Thaps21800;constitutive=1;ensembl_end_phase=1;rank=5 chr3 ensembl protein_coding_gene 1211202 1214635 . + . ID=Thaps21801;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY34];external_name=Thaps21801;logic_name=jgi_thaps3 chr3 ensembl transcript 1211202 1214635 . + . ID=Thaps21801;Parent=Thaps21801;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1211202 1211497 . + 0 ID=Thaps21801;Parent=Thaps21801;rank=1 chr3 . exon 1211202 1211497 . + . ID=Thaps21801.1;Parent=Thaps21801;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1211577 1213759 . + 0 ID=Thaps21801;Parent=Thaps21801;rank=2 chr3 . exon 1211577 1213759 . + . ID=Thaps21801.2;Parent=Thaps21801;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1213841 1214284 . + 0 ID=Thaps21801;Parent=Thaps21801;rank=3 chr3 . exon 1213841 1214284 . + . ID=Thaps21801.3;Parent=Thaps21801;constitutive=1;rank=3 chr3 . CDS 1214364 1214635 . + 0 ID=Thaps21801;Parent=Thaps21801;rank=4 chr3 . exon 1214364 1214635 . + . ID=Thaps21801.4;Parent=Thaps21801;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 1214711 1219461 . - . ID=Thaps21802;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY35];external_name=Thaps21802;logic_name=jgi_thaps3 chr3 ensembl transcript 1214711 1219461 . - . ID=Thaps21802;Parent=Thaps21802;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1214711 1215450 . - 0 ID=Thaps21802;Parent=Thaps21802;rank=4 chr3 . exon 1214711 1215450 . - . ID=Thaps21802.4;Parent=Thaps21802;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1215535 1215673 . - 0 ID=Thaps21802;Parent=Thaps21802;rank=3 chr3 . CDS 1215757 1216048 . - 0 ID=Thaps21802;Parent=Thaps21802;rank=2 chr3 . CDS 1216085 1219461 . - 0 ID=Thaps21802;Parent=Thaps21802;rank=1 chr3 ensembl protein_coding_gene 1209555 1210685 . - . ID=Thaps32610;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY33];external_name=Thaps32610;logic_name=jgi_thaps3 chr3 ensembl transcript 1209555 1210685 . - . ID=Thaps32610;Parent=Thaps32610;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1209555 1210108 . - 0 ID=Thaps32610;Parent=Thaps32610;rank=2 chr3 . exon 1209555 1210108 . - . ID=Thaps32610.2;Parent=Thaps32610;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1210190 1210685 . - 0 ID=Thaps32610;Parent=Thaps32610;rank=1 chr3 . exon 1210190 1210685 . - . ID=Thaps32610.1;Parent=Thaps32610;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1208489 1209359 . + . ID=Thaps32845;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY32];external_name=Thaps32845;logic_name=jgi_thaps3 chr3 ensembl transcript 1208489 1209359 . + . ID=Thaps32845;Parent=Thaps32845;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1208489 1208594 . + 0 ID=Thaps32845;Parent=Thaps32845;rank=1 chr3 . exon 1208489 1208594 . + . ID=Thaps32845.1;Parent=Thaps32845;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1208710 1209359 . + 0 ID=Thaps32845;Parent=Thaps32845;rank=2 chr3 . exon 1208710 1209359 . + . ID=Thaps32845.2;Parent=Thaps32845;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . repeat_region 1220990 1220997 . ? . description=dust chr3 . exon 1215535 1215673 . - . ID=Thaps21802.3;Parent=Thaps21802;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 1215757 1216048 . - . ID=Thaps21802.2;Parent=Thaps21802;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . exon 1216085 1219461 . - . ID=Thaps21802.1;Parent=Thaps21802;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1223647 1225566 . + . ID=Thaps21804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY37];external_name=Thaps21804;logic_name=jgi_thaps3 chr3 ensembl transcript 1223647 1225566 . + . ID=Thaps21804;Parent=Thaps21804;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1223647 1225566 . + 0 ID=Thaps21804;Parent=Thaps21804;rank=1 chr3 . exon 1223647 1225566 . + . ID=Thaps21804.1;Parent=Thaps21804;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1221012 1223411 . - . ID=Thaps268500;biotype=protein_coding;description=Heat shock protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY36];external_name=Thaps268500;logic_name=jgi_thaps3 chr3 ensembl transcript 1221012 1223411 . - . ID=Thaps268500;Parent=Thaps268500;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1221012 1223118 . - 0 ID=Thaps268500;Parent=Thaps268500;rank=2 chr3 . exon 1221012 1223118 . - . ID=Thaps268500.2;Parent=Thaps268500;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1223206 1223411 . - 0 ID=Thaps268500;Parent=Thaps268500;rank=1 chr3 . exon 1223206 1223411 . - . ID=Thaps268500.1;Parent=Thaps268500;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . repeat_region 1230213 1230254 . ? . description=trf chr3 ensembl protein_coding_gene 1230793 1233345 . + . ID=Thaps21805;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY40];external_name=Thaps21805;logic_name=jgi_thaps3 chr3 ensembl transcript 1230793 1233345 . + . ID=Thaps21805;Parent=Thaps21805;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1230793 1233345 . + 0 ID=Thaps21805;Parent=Thaps21805;rank=1 chr3 . exon 1230793 1233345 . + . ID=Thaps21805.1;Parent=Thaps21805;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1227022 1228656 . + . ID=Thaps261832;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY38];external_name=Thaps261832;logic_name=jgi_thaps3 chr3 ensembl transcript 1227022 1228656 . + . ID=Thaps261832;Parent=Thaps261832;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1227022 1227166 . + 0 ID=Thaps261832;Parent=Thaps261832;rank=1 chr3 . exon 1227022 1227166 . + . ID=Thaps261832.1;Parent=Thaps261832;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1227288 1227511 . + 0 ID=Thaps261832;Parent=Thaps261832;rank=2 chr3 . exon 1227288 1227511 . + . ID=Thaps261832.2;Parent=Thaps261832;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1227598 1227818 . + 0 ID=Thaps261832;Parent=Thaps261832;rank=3 chr3 . exon 1227598 1227818 . + . ID=Thaps261832.3;Parent=Thaps261832;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1227902 1228086 . + 0 ID=Thaps261832;Parent=Thaps261832;rank=4 chr3 . exon 1227902 1228086 . + . ID=Thaps261832.4;Parent=Thaps261832;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1228111 1228178 . + 0 ID=Thaps261832;Parent=Thaps261832;rank=5 chr3 . exon 1228111 1228178 . + . ID=Thaps261832.5;Parent=Thaps261832;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 1228227 1228656 . + 0 ID=Thaps261832;Parent=Thaps261832;rank=6 chr3 . exon 1228227 1228656 . + . ID=Thaps261832.6;Parent=Thaps261832;constitutive=1;ensembl_end_phase=1;rank=6 chr3 ensembl protein_coding_gene 1229399 1230217 . - . ID=Thaps3551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY39];external_name=Thaps3551;logic_name=jgi_thaps3 chr3 ensembl transcript 1229399 1230217 . - . ID=Thaps3551;Parent=Thaps3551;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1229399 1230217 . - 0 ID=Thaps3551;Parent=Thaps3551;rank=1 chr3 . exon 1229399 1230217 . - . ID=Thaps3551.1;Parent=Thaps3551;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1233592 1234514 . - . ID=Thaps3553;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY41];external_name=Thaps3553;logic_name=jgi_thaps3 chr3 ensembl transcript 1233592 1234514 . - . ID=Thaps3553;Parent=Thaps3553;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1233592 1234174 . - 0 ID=Thaps3553;Parent=Thaps3553;rank=3 chr3 . exon 1233592 1234174 . - . ID=Thaps3553.3;Parent=Thaps3553;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1234296 1234363 . - 0 ID=Thaps3553;Parent=Thaps3553;rank=2 chr3 . exon 1234296 1234363 . - . ID=Thaps3553.2;Parent=Thaps3553;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1234449 1234514 . - 0 ID=Thaps3553;Parent=Thaps3553;rank=1 chr3 . exon 1234449 1234514 . - . ID=Thaps3553.1;Parent=Thaps3553;constitutive=1;rank=1 chr3 . repeat_region 1237438 1237458 . ? . description=dust chr3 . repeat_region 1238199 1238294 . - . description=Harbinger2N_TP chr3 . repeat_region 1244655 1244662 . ? . description=dust chr3 ensembl protein_coding_gene 1241396 1241638 . + . ID=Thaps20146;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY44];external_name=Thaps20146;logic_name=jgi_thaps3 chr3 ensembl transcript 1241396 1241638 . + . ID=Thaps20146;Parent=Thaps20146;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1241396 1241638 . + 0 ID=Thaps20146;Parent=Thaps20146;rank=1 chr3 . exon 1241396 1241638 . + . ID=Thaps20146.1;Parent=Thaps20146;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1238469 1240293 . - . ID=Thaps21806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY43];external_name=Thaps21806;logic_name=jgi_thaps3 chr3 ensembl transcript 1238469 1240293 . - . ID=Thaps21806;Parent=Thaps21806;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1238469 1238962 . - 0 ID=Thaps21806;Parent=Thaps21806;rank=2 chr3 . exon 1238469 1238962 . - . ID=Thaps21806.2;Parent=Thaps21806;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1238982 1240293 . - 0 ID=Thaps21806;Parent=Thaps21806;rank=1 chr3 . exon 1238982 1240293 . - . ID=Thaps21806.1;Parent=Thaps21806;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1242161 1244518 . - . ID=Thaps21807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY45];external_name=Thaps21807;logic_name=jgi_thaps3 chr3 ensembl transcript 1242161 1244518 . - . ID=Thaps21807;Parent=Thaps21807;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1242161 1244518 . - 0 ID=Thaps21807;Parent=Thaps21807;rank=1 chr3 . exon 1242161 1244518 . - . ID=Thaps21807.1;Parent=Thaps21807;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1244859 1247463 . - . ID=Thaps21808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY46];external_name=Thaps21808;logic_name=jgi_thaps3 chr3 ensembl transcript 1244859 1247463 . - . ID=Thaps21808;Parent=Thaps21808;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1244859 1245752 . - 0 ID=Thaps21808;Parent=Thaps21808;rank=2 chr3 . exon 1244859 1245752 . - . ID=Thaps21808.2;Parent=Thaps21808;constitutive=1;rank=2 chr3 . CDS 1245847 1247463 . - 0 ID=Thaps21808;Parent=Thaps21808;rank=1 chr3 ensembl protein_coding_gene 1235237 1236549 . - . ID=Thaps3554;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY42];external_name=Thaps3554;logic_name=jgi_thaps3 chr3 ensembl transcript 1235237 1236549 . - . ID=Thaps3554;Parent=Thaps3554;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1235237 1235890 . - 0 ID=Thaps3554;Parent=Thaps3554;rank=4 chr3 . exon 1235237 1235890 . - . ID=Thaps3554.4;Parent=Thaps3554;constitutive=1;rank=4 chr3 . CDS 1235990 1236079 . - 0 ID=Thaps3554;Parent=Thaps3554;rank=3 chr3 . exon 1235990 1236079 . - . ID=Thaps3554.3;Parent=Thaps3554;constitutive=1;rank=3 chr3 . CDS 1236208 1236260 . - 0 ID=Thaps3554;Parent=Thaps3554;rank=2 chr3 . exon 1236208 1236260 . - . ID=Thaps3554.2;Parent=Thaps3554;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1236393 1236549 . - 0 ID=Thaps3554;Parent=Thaps3554;rank=1 chr3 . exon 1236393 1236549 . - . ID=Thaps3554.1;Parent=Thaps3554;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 1247048 1247075 . ? . description=trf chr3 . exon 1245847 1247463 . - . ID=Thaps21808.1;Parent=Thaps21808;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1248153 1252399 . + . ID=Thaps21809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY47];external_name=Thaps21809;logic_name=jgi_thaps3 chr3 ensembl transcript 1248153 1252399 . + . ID=Thaps21809;Parent=Thaps21809;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1248153 1249096 . + 0 ID=Thaps21809;Parent=Thaps21809;rank=1 chr3 . exon 1248153 1249096 . + . ID=Thaps21809.1;Parent=Thaps21809;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1249211 1250328 . + 0 ID=Thaps21809;Parent=Thaps21809;rank=2 chr3 . exon 1249211 1250328 . + . ID=Thaps21809.2;Parent=Thaps21809;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1250414 1250808 . + 0 ID=Thaps21809;Parent=Thaps21809;rank=3 chr3 . exon 1250414 1250808 . + . ID=Thaps21809.3;Parent=Thaps21809;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1250903 1252399 . + 0 ID=Thaps21809;Parent=Thaps21809;rank=4 chr3 . exon 1250903 1252399 . + . ID=Thaps21809.4;Parent=Thaps21809;constitutive=1;rank=4 chr3 ensembl protein_coding_gene 1254394 1255349 . - . ID=Thaps21811;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY49];external_name=Thaps21811;logic_name=jgi_thaps3 chr3 ensembl transcript 1254394 1255349 . - . ID=Thaps21811;Parent=Thaps21811;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1254394 1254840 . - 0 ID=Thaps21811;Parent=Thaps21811;rank=2 chr3 . exon 1254394 1254840 . - . ID=Thaps21811.2;Parent=Thaps21811;constitutive=1;rank=2 chr3 . CDS 1255311 1255349 . - 0 ID=Thaps21811;Parent=Thaps21811;rank=1 chr3 ensembl protein_coding_gene 1253029 1253883 . + . ID=Thaps3560;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY48];external_name=Thaps3560;logic_name=jgi_thaps3 chr3 ensembl transcript 1253029 1253883 . + . ID=Thaps3560;Parent=Thaps3560;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1253029 1253130 . + 0 ID=Thaps3560;Parent=Thaps3560;rank=1 chr3 . exon 1253029 1253130 . + . ID=Thaps3560.1;Parent=Thaps3560;constitutive=1;rank=1 chr3 . CDS 1253288 1253556 . + 0 ID=Thaps3560;Parent=Thaps3560;rank=2 chr3 . exon 1253288 1253556 . + . ID=Thaps3560.2;Parent=Thaps3560;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1253670 1253883 . + 0 ID=Thaps3560;Parent=Thaps3560;rank=3 chr3 . exon 1253670 1253883 . + . ID=Thaps3560.3;Parent=Thaps3560;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . repeat_region 1261736 1261759 . ? . description=dust chr3 . repeat_region 1264185 1264208 . ? . description=dust chr3 . exon 1255311 1255349 . - . ID=Thaps21811.1;Parent=Thaps21811;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1260124 1261458 . + . ID=Thaps3563;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY51];external_name=Thaps3563;logic_name=jgi_thaps3 chr3 ensembl transcript 1260124 1261458 . + . ID=Thaps3563;Parent=Thaps3563;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1260124 1261458 . + 0 ID=Thaps3563;Parent=Thaps3563;rank=1 chr3 . exon 1260124 1261458 . + . ID=Thaps3563.1;Parent=Thaps3563;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1261814 1263089 . + . ID=Thaps3564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY52];external_name=Thaps3564;logic_name=jgi_thaps3 chr3 ensembl transcript 1261814 1263089 . + . ID=Thaps3564;Parent=Thaps3564;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1261814 1261977 . + 0 ID=Thaps3564;Parent=Thaps3564;rank=1 chr3 . exon 1261814 1261977 . + . ID=Thaps3564.1;Parent=Thaps3564;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1262192 1262521 . + 0 ID=Thaps3564;Parent=Thaps3564;rank=2 chr3 . exon 1262192 1262521 . + . ID=Thaps3564.2;Parent=Thaps3564;constitutive=1;rank=2 chr3 . CDS 1262681 1263089 . + 0 ID=Thaps3564;Parent=Thaps3564;rank=3 chr3 . exon 1262681 1263089 . + . ID=Thaps3564.3;Parent=Thaps3564;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 1257780 1258957 . - . ID=Thaps39936;biotype=protein_coding;description=Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BY50];external_name=Thaps39936;logic_name=jgi_thaps3 chr3 ensembl transcript 1257780 1258957 . - . ID=Thaps39936;Parent=Thaps39936;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1257780 1258100 . - 0 ID=Thaps39936;Parent=Thaps39936;rank=3 chr3 . exon 1257780 1258100 . - . ID=Thaps39936.3;Parent=Thaps39936;constitutive=1;rank=3 chr3 . CDS 1258200 1258589 . - 0 ID=Thaps39936;Parent=Thaps39936;rank=2 chr3 . exon 1258200 1258589 . - . ID=Thaps39936.2;Parent=Thaps39936;constitutive=1;rank=2 chr3 . CDS 1258691 1258957 . - 0 ID=Thaps39936;Parent=Thaps39936;rank=1 chr3 . exon 1258691 1258957 . - . ID=Thaps39936.1;Parent=Thaps39936;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1263301 1264725 . - . ID=Thaps39941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY53];external_name=Thaps39941;logic_name=jgi_thaps3 chr3 ensembl transcript 1263301 1264725 . - . ID=Thaps39941;Parent=Thaps39941;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1263301 1263757 . - 0 ID=Thaps39941;Parent=Thaps39941;rank=4 chr3 . exon 1263301 1263757 . - . ID=Thaps39941.4;Parent=Thaps39941;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1263839 1264177 . - 0 ID=Thaps39941;Parent=Thaps39941;rank=3 chr3 . exon 1263839 1264177 . - . ID=Thaps39941.3;Parent=Thaps39941;constitutive=1;rank=3 chr3 . CDS 1264268 1264398 . - 0 ID=Thaps39941;Parent=Thaps39941;rank=2 chr3 . exon 1264268 1264398 . - . ID=Thaps39941.2;Parent=Thaps39941;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1264576 1264725 . - 0 ID=Thaps39941;Parent=Thaps39941;rank=1 chr3 . exon 1264576 1264725 . - . ID=Thaps39941.1;Parent=Thaps39941;constitutive=1;rank=1 chr3 . repeat_region 1269606 1269627 . ? . description=trf chr3 . repeat_region 1271882 1272270 . + . description=TE2c_TP chr3 . repeat_region 1271909 1271948 . ? . description=trf chr3 . repeat_region 1272497 1272682 . + . description=TE2c_TP chr3 . repeat_region 1272687 1272742 . - . description=TE2c_TP chr3 . repeat_region 1273368 1273834 . ? . description=trf chr3 . repeat_region 1273843 1274902 . + . description=TE1_TP chr3 ensembl protein_coding_gene 1266315 1267712 . - . ID=Thaps21815;biotype=protein_coding;description=S-adenosylmethionine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BY55];external_name=AMS1;logic_name=jgi_thaps3 chr3 ensembl transcript 1266315 1267712 . - . ID=Thaps21815;Parent=Thaps21815;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1266315 1267712 . - 0 ID=Thaps21815;Parent=Thaps21815;rank=1 chr3 . exon 1266315 1267712 . - . ID=Thaps21815.1;Parent=Thaps21815;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1265165 1265980 . + . ID=Thaps32758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY54];external_name=Thaps32758;logic_name=jgi_thaps3 chr3 ensembl transcript 1265165 1265980 . + . ID=Thaps32758;Parent=Thaps32758;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1265165 1265314 . + 0 ID=Thaps32758;Parent=Thaps32758;rank=1 chr3 . exon 1265165 1265314 . + . ID=Thaps32758.1;Parent=Thaps32758;constitutive=1;rank=1 chr3 . CDS 1265377 1265380 . + 0 ID=Thaps32758;Parent=Thaps32758;rank=2 chr3 . exon 1265377 1265380 . + . ID=Thaps32758.2;Parent=Thaps32758;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1265514 1265980 . + 0 ID=Thaps32758;Parent=Thaps32758;rank=3 chr3 . exon 1265514 1265980 . + . ID=Thaps32758.3;Parent=Thaps32758;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1269844 1271125 . + . ID=Thaps33161;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY57];external_name=Thaps33161;logic_name=jgi_thaps3 chr3 ensembl transcript 1269844 1271125 . + . ID=Thaps33161;Parent=Thaps33161;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1269844 1270011 . + 0 ID=Thaps33161;Parent=Thaps33161;rank=1 chr3 . exon 1269844 1270011 . + . ID=Thaps33161.1;Parent=Thaps33161;constitutive=1;rank=1 chr3 . CDS 1270096 1270330 . + 0 ID=Thaps33161;Parent=Thaps33161;rank=2 chr3 . exon 1270096 1270330 . + . ID=Thaps33161.2;Parent=Thaps33161;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1270428 1271125 . + 0 ID=Thaps33161;Parent=Thaps33161;rank=3 chr3 . exon 1270428 1271125 . + . ID=Thaps33161.3;Parent=Thaps33161;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1268112 1269464 . - . ID=Thaps39946;biotype=protein_coding;description=S-adenosylmethionine synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BY56];external_name=AMS2;logic_name=jgi_thaps3 chr3 ensembl transcript 1268112 1269464 . - . ID=Thaps39946;Parent=Thaps39946;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1268112 1269464 . - 0 ID=Thaps39946;Parent=Thaps39946;rank=1 chr3 . exon 1268112 1269464 . - . ID=Thaps39946.1;Parent=Thaps39946;constitutive=1;rank=1 chr3 . repeat_region 1275459 1275731 . + . description=Harbinger4_TP chr3 . repeat_region 1275729 1275757 . ? . description=dust chr3 . repeat_region 1278457 1278466 . ? . description=dust chr3 . repeat_region 1280354 1280412 . ? . description=dust chr3 ensembl protein_coding_gene 1284426 1286846 . + . ID=Thaps21819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY62];external_name=Thaps21819;logic_name=jgi_thaps3 chr3 ensembl transcript 1284426 1286846 . + . ID=Thaps21819;Parent=Thaps21819;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1284426 1286846 . + 0 ID=Thaps21819;Parent=Thaps21819;rank=1 chr3 . exon 1284426 1286846 . + . ID=Thaps21819.1;Parent=Thaps21819;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1279605 1280511 . + . ID=Thaps261839;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BY59];external_name=Thaps261839;logic_name=jgi_thaps3 chr3 ensembl transcript 1279605 1280511 . + . ID=Thaps261839;Parent=Thaps261839;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1279605 1280511 . + 0 ID=Thaps261839;Parent=Thaps261839;rank=1 chr3 . exon 1279605 1280511 . + . ID=Thaps261839.1;Parent=Thaps261839;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1281307 1282012 . + . ID=Thaps33024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY60];external_name=Thaps33024;logic_name=jgi_thaps3 chr3 ensembl transcript 1281307 1282012 . + . ID=Thaps33024;Parent=Thaps33024;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1281307 1281387 . + 0 ID=Thaps33024;Parent=Thaps33024;rank=1 chr3 . exon 1281307 1281387 . + . ID=Thaps33024.1;Parent=Thaps33024;constitutive=1;rank=1 chr3 . CDS 1281476 1282012 . + 0 ID=Thaps33024;Parent=Thaps33024;rank=2 chr3 . exon 1281476 1282012 . + . ID=Thaps33024.2;Parent=Thaps33024;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 1276082 1277237 . + . ID=Thaps3570;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY58];external_name=Thaps3570;logic_name=jgi_thaps3 chr3 ensembl transcript 1276082 1277237 . + . ID=Thaps3570;Parent=Thaps3570;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1276082 1276127 . + 0 ID=Thaps3570;Parent=Thaps3570;rank=1 chr3 . exon 1276082 1276127 . + . ID=Thaps3570.1;Parent=Thaps3570;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1276560 1276723 . + 0 ID=Thaps3570;Parent=Thaps3570;rank=2 chr3 . exon 1276560 1276723 . + . ID=Thaps3570.2;Parent=Thaps3570;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1276806 1277237 . + 0 ID=Thaps3570;Parent=Thaps3570;rank=3 chr3 . exon 1276806 1277237 . + . ID=Thaps3570.3;Parent=Thaps3570;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1282176 1283905 . - . ID=Thaps39953;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BY61];external_name=Thaps39953;logic_name=jgi_thaps3 chr3 ensembl transcript 1282176 1283905 . - . ID=Thaps39953;Parent=Thaps39953;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1282176 1282744 . - 0 ID=Thaps39953;Parent=Thaps39953;rank=3 chr3 . exon 1282176 1282744 . - . ID=Thaps39953.3;Parent=Thaps39953;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1282831 1283769 . - 0 ID=Thaps39953;Parent=Thaps39953;rank=2 chr3 . exon 1282831 1283769 . - . ID=Thaps39953.2;Parent=Thaps39953;constitutive=1;rank=2 chr3 . CDS 1283857 1283905 . - 0 ID=Thaps39953;Parent=Thaps39953;rank=1 chr3 . exon 1283857 1283905 . - . ID=Thaps39953.1;Parent=Thaps39953;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1287263 1289362 . - . ID=Thaps12899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY63];external_name=Thaps12899;logic_name=jgi_thaps3 chr3 ensembl transcript 1287263 1289362 . - . ID=Thaps12899;Parent=Thaps12899;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1287263 1287666 . - 0 ID=Thaps12899;Parent=Thaps12899;rank=4 chr3 . exon 1287263 1287666 . - . ID=Thaps12899.4;Parent=Thaps12899;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1287745 1288399 . - 0 ID=Thaps12899;Parent=Thaps12899;rank=3 chr3 . exon 1287745 1288399 . - . ID=Thaps12899.3;Parent=Thaps12899;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1288491 1288621 . - 0 ID=Thaps12899;Parent=Thaps12899;rank=2 chr3 . exon 1288491 1288621 . - . ID=Thaps12899.2;Parent=Thaps12899;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1288711 1289362 . - 0 ID=Thaps12899;Parent=Thaps12899;rank=1 chr3 . exon 1288711 1289362 . - . ID=Thaps12899.1;Parent=Thaps12899;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1289874 1291750 . + . ID=Thaps21820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY64];external_name=Thaps21820;logic_name=jgi_thaps3 chr3 ensembl transcript 1289874 1291750 . + . ID=Thaps21820;Parent=Thaps21820;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1289874 1290156 . + 0 ID=Thaps21820;Parent=Thaps21820;rank=1 chr3 . exon 1289874 1290156 . + . ID=Thaps21820.1;Parent=Thaps21820;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1290255 1291750 . + 0 ID=Thaps21820;Parent=Thaps21820;rank=2 chr3 . exon 1290255 1291750 . + . ID=Thaps21820.2;Parent=Thaps21820;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 1293050 1293562 . + . ID=Thaps21821;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY66];external_name=Thaps21821;logic_name=jgi_thaps3 chr3 ensembl transcript 1293050 1293562 . + . ID=Thaps21821;Parent=Thaps21821;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1293050 1293562 . + 0 ID=Thaps21821;Parent=Thaps21821;rank=1 chr3 . exon 1293050 1293562 . + . ID=Thaps21821.1;Parent=Thaps21821;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1292021 1292818 . - . ID=Thaps3577;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY65];external_name=Thaps3577;logic_name=jgi_thaps3 chr3 ensembl transcript 1292021 1292818 . - . ID=Thaps3577;Parent=Thaps3577;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1292021 1292818 . - 0 ID=Thaps3577;Parent=Thaps3577;rank=1 chr3 . exon 1292021 1292818 . - . ID=Thaps3577.1;Parent=Thaps3577;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1294079 1295045 . + . ID=Thaps3579;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY67];external_name=Thaps3579;logic_name=jgi_thaps3 chr3 ensembl transcript 1294079 1295045 . + . ID=Thaps3579;Parent=Thaps3579;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1294079 1294148 . + 0 ID=Thaps3579;Parent=Thaps3579;rank=1 chr3 . exon 1294079 1294148 . + . ID=Thaps3579.1;Parent=Thaps3579;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1294248 1294814 . + 0 ID=Thaps3579;Parent=Thaps3579;rank=2 chr3 . exon 1294248 1294814 . + . ID=Thaps3579.2;Parent=Thaps3579;constitutive=1;rank=2 chr3 . CDS 1294901 1294955 . + 0 ID=Thaps3579;Parent=Thaps3579;rank=3 chr3 . CDS 1294991 1295045 . + 0 ID=Thaps3579;Parent=Thaps3579;rank=4 chr3 . repeat_region 1297186 1297206 . ? . description=trf chr3 . repeat_region 1297186 1297206 . ? . description=dust chr3 . repeat_region 1302912 1302924 . ? . description=dust chr3 . exon 1294901 1294955 . + . ID=Thaps3579.3;Parent=Thaps3579;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 1294991 1295045 . + . ID=Thaps3579.4;Parent=Thaps3579;constitutive=1;ensembl_end_phase=1;rank=4 chr3 ensembl protein_coding_gene 1295593 1297750 . - . ID=Thaps3580;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY68];external_name=Thaps3580;logic_name=jgi_thaps3 chr3 ensembl transcript 1295593 1297750 . - . ID=Thaps3580;Parent=Thaps3580;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1295593 1296599 . - 0 ID=Thaps3580;Parent=Thaps3580;rank=2 chr3 . exon 1295593 1296599 . - . ID=Thaps3580.2;Parent=Thaps3580;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1296679 1297750 . - 0 ID=Thaps3580;Parent=Thaps3580;rank=1 chr3 . exon 1296679 1297750 . - . ID=Thaps3580.1;Parent=Thaps3580;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1298054 1299181 . + . ID=Thaps3581;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY69];external_name=Thaps3581;logic_name=jgi_thaps3 chr3 ensembl transcript 1298054 1299181 . + . ID=Thaps3581;Parent=Thaps3581;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1298054 1299181 . + 0 ID=Thaps3581;Parent=Thaps3581;rank=1 chr3 . exon 1298054 1299181 . + . ID=Thaps3581.1;Parent=Thaps3581;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1300062 1304769 . + . ID=Thaps3582;biotype=protein_coding;description=Rab-like rab-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY70];external_name=Thaps3582;logic_name=jgi_thaps3 chr3 ensembl transcript 1300062 1304769 . + . ID=Thaps3582;Parent=Thaps3582;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1300062 1300641 . + 0 ID=Thaps3582;Parent=Thaps3582;rank=1 chr3 . exon 1300062 1300641 . + . ID=Thaps3582.1;Parent=Thaps3582;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1304741 1304769 . + 0 ID=Thaps3582;Parent=Thaps3582;rank=2 chr3 . exon 1304741 1304769 . + . ID=Thaps3582.2;Parent=Thaps3582;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 1305748 1306537 . - . ID=Thaps21824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY72];external_name=Thaps21824;logic_name=jgi_thaps3 chr3 ensembl transcript 1305748 1306537 . - . ID=Thaps21824;Parent=Thaps21824;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1305748 1305785 . - 0 ID=Thaps21824;Parent=Thaps21824;rank=3 chr3 . exon 1305748 1305785 . - . ID=Thaps21824.3;Parent=Thaps21824;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1305867 1306057 . - 0 ID=Thaps21824;Parent=Thaps21824;rank=2 chr3 . exon 1305867 1306057 . - . ID=Thaps21824.2;Parent=Thaps21824;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1306146 1306537 . - 0 ID=Thaps21824;Parent=Thaps21824;rank=1 chr3 . exon 1306146 1306537 . - . ID=Thaps21824.1;Parent=Thaps21824;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1307323 1308690 . + . ID=Thaps21825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY73];external_name=Thaps21825;logic_name=jgi_thaps3 chr3 ensembl transcript 1307323 1308690 . + . ID=Thaps21825;Parent=Thaps21825;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1307323 1308690 . + 0 ID=Thaps21825;Parent=Thaps21825;rank=1 chr3 . exon 1307323 1308690 . + . ID=Thaps21825.1;Parent=Thaps21825;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1304886 1305649 . + . ID=Thaps3583;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY71];external_name=Thaps3583;logic_name=jgi_thaps3 chr3 ensembl transcript 1304886 1305649 . + . ID=Thaps3583;Parent=Thaps3583;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1304886 1304897 . + 0 ID=Thaps3583;Parent=Thaps3583;rank=1 chr3 . exon 1304886 1304897 . + . ID=Thaps3583.1;Parent=Thaps3583;constitutive=1;rank=1 chr3 . CDS 1305057 1305096 . + 0 ID=Thaps3583;Parent=Thaps3583;rank=2 chr3 . exon 1305057 1305096 . + . ID=Thaps3583.2;Parent=Thaps3583;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1305252 1305649 . + 0 ID=Thaps3583;Parent=Thaps3583;rank=3 chr3 . exon 1305252 1305649 . + . ID=Thaps3583.3;Parent=Thaps3583;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1312382 1313212 . + . ID=Thaps3587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY75];external_name=Thaps3587;logic_name=jgi_thaps3 chr3 ensembl transcript 1312382 1313212 . + . ID=Thaps3587;Parent=Thaps3587;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1312382 1313212 . + 0 ID=Thaps3587;Parent=Thaps3587;rank=1 chr3 . exon 1312382 1313212 . + . ID=Thaps3587.1;Parent=Thaps3587;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1309675 1310361 . - . ID=Thaps39955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY74];external_name=Thaps39955;logic_name=jgi_thaps3 chr3 ensembl transcript 1309675 1310361 . - . ID=Thaps39955;Parent=Thaps39955;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1309675 1310361 . - 0 ID=Thaps39955;Parent=Thaps39955;rank=1 chr3 . exon 1309675 1310361 . - . ID=Thaps39955.1;Parent=Thaps39955;constitutive=1;rank=1 chr3 . repeat_region 1318703 1318752 . ? . description=trf chr3 . repeat_region 1321516 1321610 . ? . description=dust chr3 ensembl protein_coding_gene 1322613 1324010 . + . ID=Thaps21827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY81];external_name=Thaps21827;logic_name=jgi_thaps3 chr3 ensembl transcript 1322613 1324010 . + . ID=Thaps21827;Parent=Thaps21827;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1322613 1324010 . + 0 ID=Thaps21827;Parent=Thaps21827;rank=1 chr3 . exon 1322613 1324010 . + . ID=Thaps21827.1;Parent=Thaps21827;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1317198 1317740 . - . ID=Thaps33199;biotype=protein_coding;description=Rab-type small G proteinRab-type small GTPase [Source:UniProtKB/TrEMBL%3BAcc:B8BY77];external_name=TPSEC4B;logic_name=jgi_thaps3 chr3 ensembl transcript 1317198 1317740 . - . ID=Thaps33199;Parent=Thaps33199;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1317198 1317740 . - 0 ID=Thaps33199;Parent=Thaps33199;rank=1 chr3 . exon 1317198 1317740 . - . ID=Thaps33199.1;Parent=Thaps33199;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1315320 1316621 . + . ID=Thaps3588;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY76];external_name=Thaps3588;logic_name=jgi_thaps3 chr3 ensembl transcript 1315320 1316621 . + . ID=Thaps3588;Parent=Thaps3588;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1315320 1316621 . + 0 ID=Thaps3588;Parent=Thaps3588;rank=1 chr3 . exon 1315320 1316621 . + . ID=Thaps3588.1;Parent=Thaps3588;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1318061 1319089 . - . ID=Thaps3590;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY78];external_name=Thaps3590;logic_name=jgi_thaps3 chr3 ensembl transcript 1318061 1319089 . - . ID=Thaps3590;Parent=Thaps3590;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1318061 1319089 . - 0 ID=Thaps3590;Parent=Thaps3590;rank=1 chr3 . exon 1318061 1319089 . - . ID=Thaps3590.1;Parent=Thaps3590;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1320100 1321032 . + . ID=Thaps3591;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY79];external_name=Thaps3591;logic_name=jgi_thaps3 chr3 ensembl transcript 1320100 1321032 . + . ID=Thaps3591;Parent=Thaps3591;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1320100 1321032 . + 0 ID=Thaps3591;Parent=Thaps3591;rank=1 chr3 . exon 1320100 1321032 . + . ID=Thaps3591.1;Parent=Thaps3591;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1321473 1322081 . - . ID=Thaps3592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY80];external_name=Thaps3592;logic_name=jgi_thaps3 chr3 ensembl transcript 1321473 1322081 . - . ID=Thaps3592;Parent=Thaps3592;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1321473 1322081 . - 0 ID=Thaps3592;Parent=Thaps3592;rank=1 chr3 . exon 1321473 1322081 . - . ID=Thaps3592.1;Parent=Thaps3592;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1324079 1326843 . - . ID=Thaps3594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY82];external_name=Thaps3594;logic_name=jgi_thaps3 chr3 ensembl transcript 1324079 1326843 . - . ID=Thaps3594;Parent=Thaps3594;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1324079 1324094 . - 0 ID=Thaps3594;Parent=Thaps3594;rank=2 chr3 . exon 1324079 1324094 . - . ID=Thaps3594.2;Parent=Thaps3594;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1324229 1326843 . - 0 ID=Thaps3594;Parent=Thaps3594;rank=1 chr3 . exon 1324229 1326843 . - . ID=Thaps3594.1;Parent=Thaps3594;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1330708 1333435 . + . ID=Thaps261844;biotype=protein_coding;description=Phospholipase [Source:UniProtKB/TrEMBL%3BAcc:B8BY84];external_name=Thaps261844;logic_name=jgi_thaps3 chr3 ensembl transcript 1330708 1333435 . + . ID=Thaps261844;Parent=Thaps261844;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1330708 1330853 . + 0 ID=Thaps261844;Parent=Thaps261844;rank=1 chr3 . exon 1330708 1330853 . + . ID=Thaps261844.1;Parent=Thaps261844;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1330939 1331107 . + 0 ID=Thaps261844;Parent=Thaps261844;rank=2 chr3 . exon 1330939 1331107 . + . ID=Thaps261844.2;Parent=Thaps261844;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1331150 1332032 . + 0 ID=Thaps261844;Parent=Thaps261844;rank=3 chr3 . exon 1331150 1332032 . + . ID=Thaps261844.3;Parent=Thaps261844;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1332117 1332301 . + 0 ID=Thaps261844;Parent=Thaps261844;rank=4 chr3 . exon 1332117 1332301 . + . ID=Thaps261844.4;Parent=Thaps261844;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1332431 1332595 . + 0 ID=Thaps261844;Parent=Thaps261844;rank=5 chr3 . exon 1332431 1332595 . + . ID=Thaps261844.5;Parent=Thaps261844;constitutive=1;rank=5 chr3 . CDS 1332684 1333435 . + 0 ID=Thaps261844;Parent=Thaps261844;rank=6 chr3 . exon 1332684 1333435 . + . ID=Thaps261844.6;Parent=Thaps261844;constitutive=1;ensembl_end_phase=2;rank=6 chr3 ensembl protein_coding_gene 1329676 1330275 . - . ID=Thaps32843;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY83];external_name=Thaps32843;logic_name=jgi_thaps3 chr3 ensembl transcript 1329676 1330275 . - . ID=Thaps32843;Parent=Thaps32843;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1329676 1330275 . - 0 ID=Thaps32843;Parent=Thaps32843;rank=1 chr3 . exon 1329676 1330275 . - . ID=Thaps32843.1;Parent=Thaps32843;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1333600 1334466 . - . ID=Thaps3598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY85];external_name=Thaps3598;logic_name=jgi_thaps3 chr3 ensembl transcript 1333600 1334466 . - . ID=Thaps3598;Parent=Thaps3598;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1333600 1334466 . - 0 ID=Thaps3598;Parent=Thaps3598;rank=1 chr3 . exon 1333600 1334466 . - . ID=Thaps3598.1;Parent=Thaps3598;constitutive=1;rank=1 chr3 . repeat_region 1335186 1335195 . ? . description=dust chr3 ensembl protein_coding_gene 1343918 1345171 . + . ID=Thaps21830;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY92];external_name=Thaps21830;logic_name=jgi_thaps3 chr3 ensembl transcript 1343918 1345171 . + . ID=Thaps21830;Parent=Thaps21830;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1343918 1345171 . + 0 ID=Thaps21830;Parent=Thaps21830;rank=1 chr3 . exon 1343918 1345171 . + . ID=Thaps21830.1;Parent=Thaps21830;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1340104 1340373 . - . ID=Thaps32691;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY89];external_name=Thaps32691;logic_name=jgi_thaps3 chr3 ensembl transcript 1340104 1340373 . - . ID=Thaps32691;Parent=Thaps32691;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1340104 1340373 . - 0 ID=Thaps32691;Parent=Thaps32691;rank=1 chr3 . exon 1340104 1340373 . - . ID=Thaps32691.1;Parent=Thaps32691;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1340608 1342653 . + . ID=Thaps33000;biotype=protein_coding;description=Formate-tetrahydrofolate ligase [Source:UniProtKB/TrEMBL%3BAcc:B8BY90];external_name=Thaps33000;logic_name=jgi_thaps3 chr3 ensembl transcript 1340608 1342653 . + . ID=Thaps33000;Parent=Thaps33000;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1340608 1341790 . + 0 ID=Thaps33000;Parent=Thaps33000;rank=1 chr3 . exon 1340608 1341790 . + . ID=Thaps33000.1;Parent=Thaps33000;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1341875 1342653 . + 0 ID=Thaps33000;Parent=Thaps33000;rank=2 chr3 . exon 1341875 1342653 . + . ID=Thaps33000.2;Parent=Thaps33000;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 1335336 1335878 . + . ID=Thaps33126;biotype=protein_coding;description=Rab-type small G proteinRab-type small GTPase [Source:UniProtKB/TrEMBL%3BAcc:B8BY77];external_name=TPSEC4B;logic_name=jgi_thaps3 chr3 ensembl transcript 1335336 1335878 . + . ID=Thaps33126;Parent=Thaps33126;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1335336 1335878 . + 0 ID=Thaps33126;Parent=Thaps33126;rank=1 chr3 . exon 1335336 1335878 . + . ID=Thaps33126.1;Parent=Thaps33126;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1336568 1337639 . - . ID=Thaps3600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY87];external_name=Thaps3600;logic_name=jgi_thaps3 chr3 ensembl transcript 1336568 1337639 . - . ID=Thaps3600;Parent=Thaps3600;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1336568 1337251 . - 0 ID=Thaps3600;Parent=Thaps3600;rank=2 chr3 . exon 1336568 1337251 . - . ID=Thaps3600.2;Parent=Thaps3600;constitutive=1;rank=2 chr3 . CDS 1337373 1337639 . - 0 ID=Thaps3600;Parent=Thaps3600;rank=1 chr3 . exon 1337373 1337639 . - . ID=Thaps3600.1;Parent=Thaps3600;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1338074 1339462 . + . ID=Thaps3601;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY88];external_name=Thaps3601;logic_name=jgi_thaps3 chr3 ensembl transcript 1338074 1339462 . + . ID=Thaps3601;Parent=Thaps3601;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1338074 1339462 . + 0 ID=Thaps3601;Parent=Thaps3601;rank=1 chr3 . exon 1338074 1339462 . + . ID=Thaps3601.1;Parent=Thaps3601;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1342768 1343589 . - . ID=Thaps3604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY91];external_name=Thaps3604;logic_name=jgi_thaps3 chr3 ensembl transcript 1342768 1343589 . - . ID=Thaps3604;Parent=Thaps3604;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1342768 1343589 . - 0 ID=Thaps3604;Parent=Thaps3604;rank=1 chr3 . exon 1342768 1343589 . - . ID=Thaps3604.1;Parent=Thaps3604;constitutive=1;rank=1 chr3 . repeat_region 1345590 1345659 . ? . description=trf chr3 . repeat_region 1347139 1347191 . ? . description=trf chr3 . repeat_region 1347139 1347191 . ? . description=trf chr3 . repeat_region 1348204 1349259 . - . description=TE1_TP chr3 . repeat_region 1348309 1348348 . ? . description=trf chr3 . repeat_region 1350636 1350741 . ? . description=trf chr3 . repeat_region 1350752 1350795 . ? . description=trf chr3 . repeat_region 1352993 1353020 . ? . description=trf chr3 ensembl protein_coding_gene 1345737 1346192 . + . ID=Thaps21831;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY93];external_name=Thaps21831;logic_name=jgi_thaps3 chr3 ensembl transcript 1345737 1346192 . + . ID=Thaps21831;Parent=Thaps21831;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1345737 1346192 . + 0 ID=Thaps21831;Parent=Thaps21831;rank=1 chr3 . exon 1345737 1346192 . + . ID=Thaps21831.1;Parent=Thaps21831;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1351647 1353353 . - . ID=Thaps21832;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY96];external_name=Thaps21832;logic_name=jgi_thaps3 chr3 ensembl transcript 1351647 1353353 . - . ID=Thaps21832;Parent=Thaps21832;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1351647 1353353 . - 0 ID=Thaps21832;Parent=Thaps21832;rank=1 chr3 . exon 1351647 1353353 . - . ID=Thaps21832.1;Parent=Thaps21832;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1353736 1355568 . + . ID=Thaps33033;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY97];external_name=Thaps33033;logic_name=jgi_thaps3 chr3 ensembl transcript 1353736 1355568 . + . ID=Thaps33033;Parent=Thaps33033;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1353736 1355085 . + 0 ID=Thaps33033;Parent=Thaps33033;rank=1 chr3 . exon 1353736 1355085 . + . ID=Thaps33033.1;Parent=Thaps33033;constitutive=1;rank=1 chr3 . CDS 1355197 1355301 . + 0 ID=Thaps33033;Parent=Thaps33033;rank=2 chr3 . CDS 1355353 1355568 . + 0 ID=Thaps33033;Parent=Thaps33033;rank=3 chr3 ensembl protein_coding_gene 1346354 1347931 . - . ID=Thaps3607;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY94];external_name=Thaps3607;logic_name=jgi_thaps3 chr3 ensembl transcript 1346354 1347931 . - . ID=Thaps3607;Parent=Thaps3607;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1346354 1347931 . - 0 ID=Thaps3607;Parent=Thaps3607;rank=1 chr3 . exon 1346354 1347931 . - . ID=Thaps3607.1;Parent=Thaps3607;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1349473 1350996 . + . ID=Thaps3608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY95];external_name=Thaps3608;logic_name=jgi_thaps3 chr3 ensembl transcript 1349473 1350996 . + . ID=Thaps3608;Parent=Thaps3608;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1349473 1350996 . + 0 ID=Thaps3608;Parent=Thaps3608;rank=1 chr3 . exon 1349473 1350996 . + . ID=Thaps3608.1;Parent=Thaps3608;constitutive=1;rank=1 chr3 . repeat_region 1358106 1358124 . ? . description=dust chr3 . repeat_region 1358323 1358343 . ? . description=dust chr3 . repeat_region 1359277 1359293 . ? . description=dust chr3 . repeat_region 1359697 1359723 . ? . description=dust chr3 . repeat_region 1363211 1363225 . ? . description=dust chr3 . repeat_region 1363578 1363585 . ? . description=dust chr3 . exon 1355197 1355301 . + . ID=Thaps33033.2;Parent=Thaps33033;constitutive=1;rank=2 chr3 . exon 1355353 1355568 . + . ID=Thaps33033.3;Parent=Thaps33033;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1357147 1357761 . - . ID=Thaps3611;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY98];external_name=Thaps3611;logic_name=jgi_thaps3 chr3 ensembl transcript 1357147 1357761 . - . ID=Thaps3611;Parent=Thaps3611;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1357147 1357761 . - 0 ID=Thaps3611;Parent=Thaps3611;rank=1 chr3 . exon 1357147 1357761 . - . ID=Thaps3611.1;Parent=Thaps3611;constitutive=1;rank=1 chr3 . repeat_region 1364966 1366018 . ? . description=trf chr3 . repeat_region 1364973 1366010 . ? . description=trf chr3 . repeat_region 1365003 1366083 . ? . description=trf chr3 . repeat_region 1366285 1366611 . ? . description=trf chr3 ensembl protein_coding_gene 1369582 1370918 . + . ID=Thaps21837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA1];external_name=Thaps21837;logic_name=jgi_thaps3 chr3 ensembl transcript 1369582 1370918 . + . ID=Thaps21837;Parent=Thaps21837;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1369582 1370072 . + 0 ID=Thaps21837;Parent=Thaps21837;rank=1 chr3 . exon 1369582 1370072 . + . ID=Thaps21837.1;Parent=Thaps21837;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1370153 1370918 . + 0 ID=Thaps21837;Parent=Thaps21837;rank=2 chr3 . exon 1370153 1370918 . + . ID=Thaps21837.2;Parent=Thaps21837;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1366770 1368344 . + . ID=Thaps268509;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BY99];external_name=Thaps268509;logic_name=jgi_thaps3 chr3 ensembl transcript 1366770 1368344 . + . ID=Thaps268509;Parent=Thaps268509;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1366770 1368344 . + 0 ID=Thaps268509;Parent=Thaps268509;rank=1 chr3 . exon 1366770 1368344 . + . ID=Thaps268509.1;Parent=Thaps268509;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1371504 1371971 . - . ID=Thaps32693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA2];external_name=Thaps32693;logic_name=jgi_thaps3 chr3 ensembl transcript 1371504 1371971 . - . ID=Thaps32693;Parent=Thaps32693;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1371504 1371971 . - 0 ID=Thaps32693;Parent=Thaps32693;rank=1 chr3 . exon 1371504 1371971 . - . ID=Thaps32693.1;Parent=Thaps32693;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1368477 1369040 . - . ID=Thaps3614;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA0];external_name=Thaps3614;logic_name=jgi_thaps3 chr3 ensembl transcript 1368477 1369040 . - . ID=Thaps3614;Parent=Thaps3614;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1368477 1369040 . - 0 ID=Thaps3614;Parent=Thaps3614;rank=1 chr3 . exon 1368477 1369040 . - . ID=Thaps3614.1;Parent=Thaps3614;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1374184 1375989 . + . ID=Thaps3617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA3];external_name=Thaps3617;logic_name=jgi_thaps3 chr3 ensembl transcript 1374184 1375989 . + . ID=Thaps3617;Parent=Thaps3617;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1374184 1375989 . + 0 ID=Thaps3617;Parent=Thaps3617;rank=1 chr3 . exon 1374184 1375989 . + . ID=Thaps3617.1;Parent=Thaps3617;constitutive=1;rank=1 chr3 . repeat_region 1377201 1377208 . ? . description=dust chr3 . repeat_region 1378996 1379034 . ? . description=dust chr3 . biological_region 1379708 1379709 0.999 - . logic_name=eponine chr3 ensembl protein_coding_gene 1379386 1383907 . + . ID=Thaps21839;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA6];external_name=Thaps21839;logic_name=jgi_thaps3 chr3 ensembl transcript 1379386 1383907 . + . ID=Thaps21839;Parent=Thaps21839;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1379386 1380199 . + 0 ID=Thaps21839;Parent=Thaps21839;rank=1 chr3 . exon 1379386 1380199 . + . ID=Thaps21839.1;Parent=Thaps21839;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1380224 1380438 . + 0 ID=Thaps21839;Parent=Thaps21839;rank=2 chr3 . exon 1380224 1380438 . + . ID=Thaps21839.2;Parent=Thaps21839;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1380535 1380771 . + 0 ID=Thaps21839;Parent=Thaps21839;rank=3 chr3 . exon 1380535 1380771 . + . ID=Thaps21839.3;Parent=Thaps21839;constitutive=1;rank=3 chr3 . CDS 1380850 1383019 . + 0 ID=Thaps21839;Parent=Thaps21839;rank=4 chr3 . exon 1380850 1383019 . + . ID=Thaps21839.4;Parent=Thaps21839;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1383108 1383907 . + 0 ID=Thaps21839;Parent=Thaps21839;rank=5 chr3 . exon 1383108 1383907 . + . ID=Thaps21839.5;Parent=Thaps21839;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 1377233 1377630 . + . ID=Thaps32816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA4];external_name=Thaps32816;logic_name=jgi_thaps3 chr3 ensembl transcript 1377233 1377630 . + . ID=Thaps32816;Parent=Thaps32816;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1377233 1377440 . + 0 ID=Thaps32816;Parent=Thaps32816;rank=1 chr3 . exon 1377233 1377440 . + . ID=Thaps32816.1;Parent=Thaps32816;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1377521 1377630 . + 0 ID=Thaps32816;Parent=Thaps32816;rank=2 chr3 . exon 1377521 1377630 . + . ID=Thaps32816.2;Parent=Thaps32816;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 1378104 1378925 . - . ID=Thaps33203;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA5];external_name=Thaps33203;logic_name=jgi_thaps3 chr3 ensembl transcript 1378104 1378925 . - . ID=Thaps33203;Parent=Thaps33203;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1378104 1378925 . - 0 ID=Thaps33203;Parent=Thaps33203;rank=1 chr3 . exon 1378104 1378925 . - . ID=Thaps33203.1;Parent=Thaps33203;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1384123 1386570 . - . ID=Thaps3621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA7];external_name=Thaps3621;logic_name=jgi_thaps3 chr3 ensembl transcript 1384123 1386570 . - . ID=Thaps3621;Parent=Thaps3621;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1384123 1386570 . - 0 ID=Thaps3621;Parent=Thaps3621;rank=1 chr3 . exon 1384123 1386570 . - . ID=Thaps3621.1;Parent=Thaps3621;constitutive=1;rank=1 chr3 . repeat_region 1384736 1385155 . ? . description=trf chr3 ensembl protein_coding_gene 1388080 1389691 . - . ID=Thaps21840;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA9];external_name=Thaps21840;logic_name=jgi_thaps3 chr3 ensembl transcript 1388080 1389691 . - . ID=Thaps21840;Parent=Thaps21840;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1388080 1389538 . - 0 ID=Thaps21840;Parent=Thaps21840;rank=2 chr3 . exon 1388080 1389538 . - . ID=Thaps21840.2;Parent=Thaps21840;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1389579 1389691 . - 0 ID=Thaps21840;Parent=Thaps21840;rank=1 chr3 . exon 1389579 1389691 . - . ID=Thaps21840.1;Parent=Thaps21840;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1389992 1392017 . + . ID=Thaps21841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYB0];external_name=Thaps21841;logic_name=jgi_thaps3 chr3 ensembl transcript 1389992 1392017 . + . ID=Thaps21841;Parent=Thaps21841;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1389992 1391760 . + 0 ID=Thaps21841;Parent=Thaps21841;rank=1 chr3 . exon 1389992 1391760 . + . ID=Thaps21841.1;Parent=Thaps21841;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1391828 1392017 . + 0 ID=Thaps21841;Parent=Thaps21841;rank=2 chr3 . exon 1391828 1392017 . + . ID=Thaps21841.2;Parent=Thaps21841;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1386903 1387844 . + . ID=Thaps3622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYA8];external_name=Thaps3622;logic_name=jgi_thaps3 chr3 ensembl transcript 1386903 1387844 . + . ID=Thaps3622;Parent=Thaps3622;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1386903 1387844 . + 0 ID=Thaps3622;Parent=Thaps3622;rank=1 chr3 . exon 1386903 1387844 . + . ID=Thaps3622.1;Parent=Thaps3622;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1392145 1394603 . - . ID=Thaps3625;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYB1];external_name=Thaps3625;logic_name=jgi_thaps3 chr3 ensembl transcript 1392145 1394603 . - . ID=Thaps3625;Parent=Thaps3625;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1392145 1392744 . - 0 ID=Thaps3625;Parent=Thaps3625;rank=4 chr3 . exon 1392145 1392744 . - . ID=Thaps3625.4;Parent=Thaps3625;constitutive=1;rank=4 chr3 . CDS 1392811 1393095 . - 0 ID=Thaps3625;Parent=Thaps3625;rank=3 chr3 . exon 1392811 1393095 . - . ID=Thaps3625.3;Parent=Thaps3625;constitutive=1;rank=3 chr3 . CDS 1393176 1394203 . - 0 ID=Thaps3625;Parent=Thaps3625;rank=2 chr3 . exon 1393176 1394203 . - . ID=Thaps3625.2;Parent=Thaps3625;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1394306 1394603 . - 0 ID=Thaps3625;Parent=Thaps3625;rank=1 chr3 . exon 1394306 1394603 . - . ID=Thaps3625.1;Parent=Thaps3625;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 1398228 1398235 . ? . description=dust chr3 ensembl protein_coding_gene 1400188 1401254 . - . ID=Thaps261852;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYB4];external_name=Thaps261852;logic_name=jgi_thaps3 chr3 ensembl transcript 1400188 1401254 . - . ID=Thaps261852;Parent=Thaps261852;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1400188 1400387 . - 0 ID=Thaps261852;Parent=Thaps261852;rank=3 chr3 . exon 1400188 1400387 . - . ID=Thaps261852.3;Parent=Thaps261852;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1400445 1400647 . - 0 ID=Thaps261852;Parent=Thaps261852;rank=2 chr3 . exon 1400445 1400647 . - . ID=Thaps261852.2;Parent=Thaps261852;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1400753 1401254 . - 0 ID=Thaps261852;Parent=Thaps261852;rank=1 chr3 . exon 1400753 1401254 . - . ID=Thaps261852.1;Parent=Thaps261852;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1394913 1396577 . + . ID=Thaps32716;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYB2];external_name=Thaps32716;logic_name=jgi_thaps3 chr3 ensembl transcript 1394913 1396577 . + . ID=Thaps32716;Parent=Thaps32716;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1394913 1396577 . + 0 ID=Thaps32716;Parent=Thaps32716;rank=1 chr3 . exon 1394913 1396577 . + . ID=Thaps32716.1;Parent=Thaps32716;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1398415 1400022 . + . ID=Thaps3627;biotype=protein_coding;description=Thiolase [Source:UniProtKB/TrEMBL%3BAcc:B8BYB3];external_name=Thaps3627;logic_name=jgi_thaps3 chr3 ensembl transcript 1398415 1400022 . + . ID=Thaps3627;Parent=Thaps3627;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1398415 1398822 . + 0 ID=Thaps3627;Parent=Thaps3627;rank=1 chr3 . exon 1398415 1398822 . + . ID=Thaps3627.1;Parent=Thaps3627;constitutive=1;rank=1 chr3 . CDS 1398912 1399250 . + 0 ID=Thaps3627;Parent=Thaps3627;rank=2 chr3 . exon 1398912 1399250 . + . ID=Thaps3627.2;Parent=Thaps3627;constitutive=1;rank=2 chr3 . CDS 1399351 1400022 . + 0 ID=Thaps3627;Parent=Thaps3627;rank=3 chr3 . exon 1399351 1400022 . + . ID=Thaps3627.3;Parent=Thaps3627;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1402103 1403996 . + . ID=Thaps3629;biotype=protein_coding;description=Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8BYB5];external_name=Thaps3629;logic_name=jgi_thaps3 chr3 ensembl transcript 1402103 1403996 . + . ID=Thaps3629;Parent=Thaps3629;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1402103 1402224 . + 0 ID=Thaps3629;Parent=Thaps3629;rank=1 chr3 . exon 1402103 1402224 . + . ID=Thaps3629.1;Parent=Thaps3629;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1402316 1403996 . + 0 ID=Thaps3629;Parent=Thaps3629;rank=2 chr3 . exon 1402316 1403996 . + . ID=Thaps3629.2;Parent=Thaps3629;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1409024 1411351 . - . ID=Thaps21843;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYB7];external_name=Thaps21843;logic_name=jgi_thaps3 chr3 ensembl transcript 1409024 1411351 . - . ID=Thaps21843;Parent=Thaps21843;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1409024 1411351 . - 0 ID=Thaps21843;Parent=Thaps21843;rank=1 chr3 . exon 1409024 1411351 . - . ID=Thaps21843.1;Parent=Thaps21843;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1413247 1414184 . - . ID=Thaps21844;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYB9];external_name=Thaps21844;logic_name=jgi_thaps3 chr3 ensembl transcript 1413247 1414184 . - . ID=Thaps21844;Parent=Thaps21844;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1413247 1413368 . - 0 ID=Thaps21844;Parent=Thaps21844;rank=2 chr3 . exon 1413247 1413368 . - . ID=Thaps21844.2;Parent=Thaps21844;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1413455 1414184 . - 0 ID=Thaps21844;Parent=Thaps21844;rank=1 chr3 . exon 1413455 1414184 . - . ID=Thaps21844.1;Parent=Thaps21844;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1405064 1408937 . + . ID=Thaps3630;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYB6];external_name=Thaps3630;logic_name=jgi_thaps3 chr3 ensembl transcript 1405064 1408937 . + . ID=Thaps3630;Parent=Thaps3630;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1405064 1405482 . + 0 ID=Thaps3630;Parent=Thaps3630;rank=1 chr3 . exon 1405064 1405482 . + . ID=Thaps3630.1;Parent=Thaps3630;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1405591 1406061 . + 0 ID=Thaps3630;Parent=Thaps3630;rank=2 chr3 . exon 1405591 1406061 . + . ID=Thaps3630.2;Parent=Thaps3630;constitutive=1;rank=2 chr3 . CDS 1406157 1406535 . + 0 ID=Thaps3630;Parent=Thaps3630;rank=3 chr3 . exon 1406157 1406535 . + . ID=Thaps3630.3;Parent=Thaps3630;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1406617 1407775 . + 0 ID=Thaps3630;Parent=Thaps3630;rank=4 chr3 . exon 1406617 1407775 . + . ID=Thaps3630.4;Parent=Thaps3630;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1407880 1408937 . + 0 ID=Thaps3630;Parent=Thaps3630;rank=5 chr3 . exon 1407880 1408937 . + . ID=Thaps3630.5;Parent=Thaps3630;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 1411988 1413010 . + . ID=Thaps3632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYB8];external_name=Thaps3632;logic_name=jgi_thaps3 chr3 ensembl transcript 1411988 1413010 . + . ID=Thaps3632;Parent=Thaps3632;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1411988 1412435 . + 0 ID=Thaps3632;Parent=Thaps3632;rank=1 chr3 . exon 1411988 1412435 . + . ID=Thaps3632.1;Parent=Thaps3632;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1412535 1413010 . + 0 ID=Thaps3632;Parent=Thaps3632;rank=2 chr3 . exon 1412535 1413010 . + . ID=Thaps3632.2;Parent=Thaps3632;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . repeat_region 1417846 1417909 . ? . description=dust chr3 ensembl protein_coding_gene 1423126 1424224 . - . ID=Thaps21846;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYC5];external_name=Thaps21846;logic_name=jgi_thaps3 chr3 ensembl transcript 1423126 1424224 . - . ID=Thaps21846;Parent=Thaps21846;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1423126 1423461 . - 0 ID=Thaps21846;Parent=Thaps21846;rank=2 chr3 . exon 1423126 1423461 . - . ID=Thaps21846.2;Parent=Thaps21846;constitutive=1;rank=2 chr3 . CDS 1423598 1424224 . - 0 ID=Thaps21846;Parent=Thaps21846;rank=1 chr3 . exon 1423598 1424224 . - . ID=Thaps21846.1;Parent=Thaps21846;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1420571 1421215 . - . ID=Thaps261857;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYC4];external_name=Thaps261857;logic_name=jgi_thaps3 chr3 ensembl transcript 1420571 1421215 . - . ID=Thaps261857;Parent=Thaps261857;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1420571 1421215 . - 0 ID=Thaps261857;Parent=Thaps261857;rank=1 chr3 . exon 1420571 1421215 . - . ID=Thaps261857.1;Parent=Thaps261857;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1414608 1415621 . - . ID=Thaps32661;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYC0];external_name=Thaps32661;logic_name=jgi_thaps3 chr3 ensembl transcript 1414608 1415621 . - . ID=Thaps32661;Parent=Thaps32661;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1414608 1415621 . - 0 ID=Thaps32661;Parent=Thaps32661;rank=1 chr3 . exon 1414608 1415621 . - . ID=Thaps32661.1;Parent=Thaps32661;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1418296 1419765 . + . ID=Thaps337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYC2];external_name=Thaps337;logic_name=jgi_thaps3 chr3 ensembl transcript 1418296 1419765 . + . ID=Thaps337;Parent=Thaps337;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1418296 1418653 . + 0 ID=Thaps337;Parent=Thaps337;rank=1 chr3 . exon 1418296 1418653 . + . ID=Thaps337.1;Parent=Thaps337;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1418732 1419198 . + 0 ID=Thaps337;Parent=Thaps337;rank=2 chr3 . exon 1418732 1419198 . + . ID=Thaps337.2;Parent=Thaps337;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1419304 1419765 . + 0 ID=Thaps337;Parent=Thaps337;rank=3 chr3 . exon 1419304 1419765 . + . ID=Thaps337.3;Parent=Thaps337;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1417816 1418143 . + . ID=Thaps3635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYC1];external_name=Thaps3635;logic_name=jgi_thaps3 chr3 ensembl transcript 1417816 1418143 . + . ID=Thaps3635;Parent=Thaps3635;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1417816 1418143 . + 0 ID=Thaps3635;Parent=Thaps3635;rank=1 chr3 . exon 1417816 1418143 . + . ID=Thaps3635.1;Parent=Thaps3635;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1419870 1420481 . - . ID=Thaps3637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYC3];external_name=Thaps3637;logic_name=jgi_thaps3 chr3 ensembl transcript 1419870 1420481 . - . ID=Thaps3637;Parent=Thaps3637;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1419870 1420481 . - 0 ID=Thaps3637;Parent=Thaps3637;rank=1 chr3 . exon 1419870 1420481 . - . ID=Thaps3637.1;Parent=Thaps3637;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1426089 1427975 . - . ID=Thaps21847;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYC7];external_name=Thaps21847;logic_name=jgi_thaps3 chr3 ensembl transcript 1426089 1427975 . - . ID=Thaps21847;Parent=Thaps21847;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1426089 1427975 . - 0 ID=Thaps21847;Parent=Thaps21847;rank=1 chr3 . exon 1426089 1427975 . - . ID=Thaps21847.1;Parent=Thaps21847;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1433188 1434195 . - . ID=Thaps21850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYD0];external_name=Thaps21850;logic_name=jgi_thaps3 chr3 ensembl transcript 1433188 1434195 . - . ID=Thaps21850;Parent=Thaps21850;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1433188 1433935 . - 0 ID=Thaps21850;Parent=Thaps21850;rank=2 chr3 . exon 1433188 1433935 . - . ID=Thaps21850.2;Parent=Thaps21850;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1434035 1434195 . - 0 ID=Thaps21850;Parent=Thaps21850;rank=1 chr3 . exon 1434035 1434195 . - . ID=Thaps21850.1;Parent=Thaps21850;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1431384 1432713 . + . ID=Thaps32577;biotype=protein_coding;description=Aspartate-semialdehyde dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BYC9];external_name=ASDH;logic_name=jgi_thaps3 chr3 ensembl transcript 1431384 1432713 . + . ID=Thaps32577;Parent=Thaps32577;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1431384 1431683 . + 0 ID=Thaps32577;Parent=Thaps32577;rank=1 chr3 . exon 1431384 1431683 . + . ID=Thaps32577.1;Parent=Thaps32577;constitutive=1;rank=1 chr3 . CDS 1431790 1431957 . + 0 ID=Thaps32577;Parent=Thaps32577;rank=2 chr3 . exon 1431790 1431957 . + . ID=Thaps32577.2;Parent=Thaps32577;constitutive=1;rank=2 chr3 . CDS 1432052 1432262 . + 0 ID=Thaps32577;Parent=Thaps32577;rank=3 chr3 . exon 1432052 1432262 . + . ID=Thaps32577.3;Parent=Thaps32577;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1432355 1432713 . + 0 ID=Thaps32577;Parent=Thaps32577;rank=4 chr3 . exon 1432355 1432713 . + . ID=Thaps32577.4;Parent=Thaps32577;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 1424674 1425960 . + . ID=Thaps3640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYC6];external_name=Thaps3640;logic_name=jgi_thaps3 chr3 ensembl transcript 1424674 1425960 . + . ID=Thaps3640;Parent=Thaps3640;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1424674 1425960 . + 0 ID=Thaps3640;Parent=Thaps3640;rank=1 chr3 . exon 1424674 1425960 . + . ID=Thaps3640.1;Parent=Thaps3640;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1428236 1430335 . + . ID=Thaps39973;biotype=protein_coding;description=Glucose-6-phosphate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BYC8];external_name=GPI3;logic_name=jgi_thaps3 chr3 ensembl transcript 1428236 1430335 . + . ID=Thaps39973;Parent=Thaps39973;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1428236 1429231 . + 0 ID=Thaps39973;Parent=Thaps39973;rank=1 chr3 . exon 1428236 1429231 . + . ID=Thaps39973.1;Parent=Thaps39973;constitutive=1;rank=1 chr3 . CDS 1429311 1429391 . + 0 ID=Thaps39973;Parent=Thaps39973;rank=2 chr3 . exon 1429311 1429391 . + . ID=Thaps39973.2;Parent=Thaps39973;constitutive=1;rank=2 chr3 . CDS 1429463 1430335 . + 0 ID=Thaps39973;Parent=Thaps39973;rank=3 chr3 . exon 1429463 1430335 . + . ID=Thaps39973.3;Parent=Thaps39973;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1438897 1443754 . - . ID=Thaps21852;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYD4];external_name=Thaps21852;logic_name=jgi_thaps3 chr3 ensembl transcript 1438897 1443754 . - . ID=Thaps21852;Parent=Thaps21852;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1438897 1439429 . - 0 ID=Thaps21852;Parent=Thaps21852;rank=4 chr3 . exon 1438897 1439429 . - . ID=Thaps21852.4;Parent=Thaps21852;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1439507 1439605 . - 0 ID=Thaps21852;Parent=Thaps21852;rank=3 chr3 . exon 1439507 1439605 . - . ID=Thaps21852.3;Parent=Thaps21852;constitutive=1;rank=3 chr3 . CDS 1439695 1439755 . - 0 ID=Thaps21852;Parent=Thaps21852;rank=2 chr3 . exon 1439695 1439755 . - . ID=Thaps21852.2;Parent=Thaps21852;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1439843 1443754 . - 0 ID=Thaps21852;Parent=Thaps21852;rank=1 chr3 . exon 1439843 1443754 . - . ID=Thaps21852.1;Parent=Thaps21852;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1435531 1435746 . - . ID=Thaps32858;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYD1];external_name=Thaps32858;logic_name=jgi_thaps3 chr3 ensembl transcript 1435531 1435746 . - . ID=Thaps32858;Parent=Thaps32858;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1435531 1435746 . - 0 ID=Thaps32858;Parent=Thaps32858;rank=1 chr3 . exon 1435531 1435746 . - . ID=Thaps32858.1;Parent=Thaps32858;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1436003 1437076 . + . ID=Thaps3646;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYD2];external_name=Thaps3646;logic_name=jgi_thaps3 chr3 ensembl transcript 1436003 1437076 . + . ID=Thaps3646;Parent=Thaps3646;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1436003 1437076 . + 0 ID=Thaps3646;Parent=Thaps3646;rank=1 chr3 . exon 1436003 1437076 . + . ID=Thaps3646.1;Parent=Thaps3646;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1437582 1438682 . + . ID=Thaps3647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYD3];external_name=Thaps3647;logic_name=jgi_thaps3 chr3 ensembl transcript 1437582 1438682 . + . ID=Thaps3647;Parent=Thaps3647;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1437582 1438682 . + 0 ID=Thaps3647;Parent=Thaps3647;rank=1 chr3 . exon 1437582 1438682 . + . ID=Thaps3647.1;Parent=Thaps3647;constitutive=1;rank=1 chr3 . repeat_region 1451912 1451921 . ? . description=dust chr3 ensembl protein_coding_gene 1454144 1456168 . + . ID=Thaps268516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYD8];external_name=Thaps268516;logic_name=jgi_thaps3 chr3 ensembl transcript 1454144 1456168 . + . ID=Thaps268516;Parent=Thaps268516;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1454144 1454396 . + 0 ID=Thaps268516;Parent=Thaps268516;rank=1 chr3 . exon 1454144 1454396 . + . ID=Thaps268516.1;Parent=Thaps268516;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1454479 1455258 . + 0 ID=Thaps268516;Parent=Thaps268516;rank=2 chr3 . CDS 1455338 1455835 . + 0 ID=Thaps268516;Parent=Thaps268516;rank=3 chr3 . CDS 1455933 1456168 . + 0 ID=Thaps268516;Parent=Thaps268516;rank=4 chr3 ensembl protein_coding_gene 1444448 1445908 . - . ID=Thaps3649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYD5];external_name=Thaps3649;logic_name=jgi_thaps3 chr3 ensembl transcript 1444448 1445908 . - . ID=Thaps3649;Parent=Thaps3649;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1444448 1445908 . - 0 ID=Thaps3649;Parent=Thaps3649;rank=1 chr3 . exon 1444448 1445908 . - . ID=Thaps3649.1;Parent=Thaps3649;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1446321 1447076 . + . ID=Thaps3650;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYD6];external_name=Thaps3650;logic_name=jgi_thaps3 chr3 ensembl transcript 1446321 1447076 . + . ID=Thaps3650;Parent=Thaps3650;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1446321 1447076 . + 0 ID=Thaps3650;Parent=Thaps3650;rank=1 chr3 . exon 1446321 1447076 . + . ID=Thaps3650.1;Parent=Thaps3650;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1447589 1451137 . - . ID=Thaps39979;biotype=protein_coding;description=Probable isoleucine-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BYD7];external_name=ITS3;logic_name=jgi_thaps3 chr3 ensembl transcript 1447589 1451137 . - . ID=Thaps39979;Parent=Thaps39979;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1447589 1448159 . - 0 ID=Thaps39979;Parent=Thaps39979;rank=3 chr3 . exon 1447589 1448159 . - . ID=Thaps39979.3;Parent=Thaps39979;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1448241 1450666 . - 0 ID=Thaps39979;Parent=Thaps39979;rank=2 chr3 . exon 1448241 1450666 . - . ID=Thaps39979.2;Parent=Thaps39979;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1450823 1451137 . - 0 ID=Thaps39979;Parent=Thaps39979;rank=1 chr3 . exon 1450823 1451137 . - . ID=Thaps39979.1;Parent=Thaps39979;constitutive=1;rank=1 chr3 . repeat_region 1458081 1458104 . ? . description=trf chr3 ensembl protein_coding_gene 1459108 1462386 . + . ID=Thaps21855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE0];external_name=Thaps21855;logic_name=jgi_thaps3 chr3 ensembl transcript 1459108 1462386 . + . ID=Thaps21855;Parent=Thaps21855;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1459108 1459465 . + 0 ID=Thaps21855;Parent=Thaps21855;rank=1 chr3 . exon 1459108 1459465 . + . ID=Thaps21855.1;Parent=Thaps21855;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1459628 1462386 . + 0 ID=Thaps21855;Parent=Thaps21855;rank=2 chr3 . exon 1459628 1462386 . + . ID=Thaps21855.2;Parent=Thaps21855;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 1454479 1455258 . + . ID=Thaps268516.2;Parent=Thaps268516;constitutive=1;rank=2 chr3 . exon 1455338 1455835 . + . ID=Thaps268516.3;Parent=Thaps268516;constitutive=1;rank=3 chr3 . exon 1455933 1456168 . + . ID=Thaps268516.4;Parent=Thaps268516;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 1456368 1458806 . - . ID=Thaps3653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYD9];external_name=Thaps3653;logic_name=jgi_thaps3 chr3 ensembl transcript 1456368 1458806 . - . ID=Thaps3653;Parent=Thaps3653;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1456368 1458806 . - 0 ID=Thaps3653;Parent=Thaps3653;rank=1 chr3 . exon 1456368 1458806 . - . ID=Thaps3653.1;Parent=Thaps3653;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1462918 1464866 . - . ID=Thaps3655;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE1];external_name=Thaps3655;logic_name=jgi_thaps3 chr3 ensembl transcript 1462918 1464866 . - . ID=Thaps3655;Parent=Thaps3655;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1462918 1463114 . - 0 ID=Thaps3655;Parent=Thaps3655;rank=6 chr3 . exon 1462918 1463114 . - . ID=Thaps3655.6;Parent=Thaps3655;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 1463199 1463242 . - 0 ID=Thaps3655;Parent=Thaps3655;rank=5 chr3 . exon 1463199 1463242 . - . ID=Thaps3655.5;Parent=Thaps3655;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 1463320 1463526 . - 0 ID=Thaps3655;Parent=Thaps3655;rank=4 chr3 . exon 1463320 1463526 . - . ID=Thaps3655.4;Parent=Thaps3655;constitutive=1;rank=4 chr3 . CDS 1463596 1463922 . - 0 ID=Thaps3655;Parent=Thaps3655;rank=3 chr3 . exon 1463596 1463922 . - . ID=Thaps3655.3;Parent=Thaps3655;constitutive=1;rank=3 chr3 . CDS 1463987 1464131 . - 0 ID=Thaps3655;Parent=Thaps3655;rank=2 chr3 . exon 1463987 1464131 . - . ID=Thaps3655.2;Parent=Thaps3655;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1464293 1464866 . - 0 ID=Thaps3655;Parent=Thaps3655;rank=1 chr3 . repeat_region 1468237 1468255 . ? . description=dust chr3 . repeat_region 1472576 1472583 . ? . description=dust chr3 ensembl protein_coding_gene 1466130 1469150 . - . ID=Thaps21856;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE2];external_name=Thaps21856;logic_name=jgi_thaps3 chr3 ensembl transcript 1466130 1469150 . - . ID=Thaps21856;Parent=Thaps21856;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1466130 1469150 . - 0 ID=Thaps21856;Parent=Thaps21856;rank=1 chr3 . exon 1466130 1469150 . - . ID=Thaps21856.1;Parent=Thaps21856;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1470042 1471391 . + . ID=Thaps21857;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE3];external_name=Thaps21857;logic_name=jgi_thaps3 chr3 ensembl transcript 1470042 1471391 . + . ID=Thaps21857;Parent=Thaps21857;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1470042 1471391 . + 0 ID=Thaps21857;Parent=Thaps21857;rank=1 chr3 . exon 1470042 1471391 . + . ID=Thaps21857.1;Parent=Thaps21857;constitutive=1;rank=1 chr3 . exon 1464293 1464866 . - . ID=Thaps3655.1;Parent=Thaps3655;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1475083 1476152 . + . ID=Thaps261863;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE4];external_name=Thaps261863;logic_name=jgi_thaps3 chr3 ensembl transcript 1475083 1476152 . + . ID=Thaps261863;Parent=Thaps261863;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1475083 1475715 . + 0 ID=Thaps261863;Parent=Thaps261863;rank=1 chr3 . exon 1475083 1475715 . + . ID=Thaps261863.1;Parent=Thaps261863;constitutive=1;rank=1 chr3 . CDS 1475802 1476152 . + 0 ID=Thaps261863;Parent=Thaps261863;rank=2 chr3 . exon 1475802 1476152 . + . ID=Thaps261863.2;Parent=Thaps261863;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 1483360 1484119 . - . ID=Thaps261864;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE8];external_name=Thaps261864;logic_name=jgi_thaps3 chr3 ensembl transcript 1483360 1484119 . - . ID=Thaps261864;Parent=Thaps261864;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1483360 1483923 . - 0 ID=Thaps261864;Parent=Thaps261864;rank=2 chr3 . exon 1483360 1483923 . - . ID=Thaps261864.2;Parent=Thaps261864;constitutive=1;rank=2 chr3 . CDS 1484027 1484119 . - 0 ID=Thaps261864;Parent=Thaps261864;rank=1 chr3 . exon 1484027 1484119 . - . ID=Thaps261864.1;Parent=Thaps261864;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1476476 1478143 . + . ID=Thaps3659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE5];external_name=Thaps3659;logic_name=jgi_thaps3 chr3 ensembl transcript 1476476 1478143 . + . ID=Thaps3659;Parent=Thaps3659;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1476476 1476813 . + 0 ID=Thaps3659;Parent=Thaps3659;rank=1 chr3 . exon 1476476 1476813 . + . ID=Thaps3659.1;Parent=Thaps3659;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1476853 1476947 . + 0 ID=Thaps3659;Parent=Thaps3659;rank=2 chr3 . exon 1476853 1476947 . + . ID=Thaps3659.2;Parent=Thaps3659;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1477029 1478143 . + 0 ID=Thaps3659;Parent=Thaps3659;rank=3 chr3 . exon 1477029 1478143 . + . ID=Thaps3659.3;Parent=Thaps3659;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1478478 1482022 . - . ID=Thaps3660;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE6];external_name=Thaps3660;logic_name=jgi_thaps3 chr3 ensembl transcript 1478478 1482022 . - . ID=Thaps3660;Parent=Thaps3660;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1478478 1478658 . - 0 ID=Thaps3660;Parent=Thaps3660;rank=5 chr3 . exon 1478478 1478658 . - . ID=Thaps3660.5;Parent=Thaps3660;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1478743 1478932 . - 0 ID=Thaps3660;Parent=Thaps3660;rank=4 chr3 . exon 1478743 1478932 . - . ID=Thaps3660.4;Parent=Thaps3660;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1479023 1481533 . - 0 ID=Thaps3660;Parent=Thaps3660;rank=3 chr3 . exon 1479023 1481533 . - . ID=Thaps3660.3;Parent=Thaps3660;constitutive=1;rank=3 chr3 . CDS 1481628 1481882 . - 0 ID=Thaps3660;Parent=Thaps3660;rank=2 chr3 . exon 1481628 1481882 . - . ID=Thaps3660.2;Parent=Thaps3660;constitutive=1;rank=2 chr3 . CDS 1482004 1482022 . - 0 ID=Thaps3660;Parent=Thaps3660;rank=1 chr3 . exon 1482004 1482022 . - . ID=Thaps3660.1;Parent=Thaps3660;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1482310 1482969 . + . ID=Thaps3661;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE7];external_name=Thaps3661;logic_name=jgi_thaps3 chr3 ensembl transcript 1482310 1482969 . + . ID=Thaps3661;Parent=Thaps3661;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1482310 1482969 . + 0 ID=Thaps3661;Parent=Thaps3661;rank=1 chr3 . exon 1482310 1482969 . + . ID=Thaps3661.1;Parent=Thaps3661;constitutive=1;rank=1 chr3 . repeat_region 1489044 1489072 . ? . description=trf chr3 . repeat_region 1489046 1489082 . ? . description=trf chr3 . repeat_region 1489089 1489131 . ? . description=trf chr3 . repeat_region 1493486 1493511 . ? . description=trf chr3 . repeat_region 1493486 1493511 . ? . description=dust chr3 . repeat_region 1493563 1493622 . ? . description=dust chr3 ensembl protein_coding_gene 1486211 1488485 . - . ID=Thaps21858;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BYF0];external_name=Thaps21858;logic_name=jgi_thaps3 chr3 ensembl transcript 1486211 1488485 . - . ID=Thaps21858;Parent=Thaps21858;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1486211 1487317 . - 0 ID=Thaps21858;Parent=Thaps21858;rank=4 chr3 . exon 1486211 1487317 . - . ID=Thaps21858.4;Parent=Thaps21858;constitutive=1;rank=4 chr3 . CDS 1487404 1487569 . - 0 ID=Thaps21858;Parent=Thaps21858;rank=3 chr3 . exon 1487404 1487569 . - . ID=Thaps21858.3;Parent=Thaps21858;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1487628 1487935 . - 0 ID=Thaps21858;Parent=Thaps21858;rank=2 chr3 . exon 1487628 1487935 . - . ID=Thaps21858.2;Parent=Thaps21858;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1488060 1488485 . - 0 ID=Thaps21858;Parent=Thaps21858;rank=1 chr3 . exon 1488060 1488485 . - . ID=Thaps21858.1;Parent=Thaps21858;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1491506 1494547 . - . ID=Thaps21860;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYF2];external_name=Thaps21860;logic_name=jgi_thaps3 chr3 ensembl transcript 1491506 1494547 . - . ID=Thaps21860;Parent=Thaps21860;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1491506 1492226 . - 0 ID=Thaps21860;Parent=Thaps21860;rank=3 chr3 . exon 1491506 1492226 . - . ID=Thaps21860.3;Parent=Thaps21860;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1492304 1493684 . - 0 ID=Thaps21860;Parent=Thaps21860;rank=2 chr3 . exon 1492304 1493684 . - . ID=Thaps21860.2;Parent=Thaps21860;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1493791 1494547 . - 0 ID=Thaps21860;Parent=Thaps21860;rank=1 chr3 . exon 1493791 1494547 . - . ID=Thaps21860.1;Parent=Thaps21860;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1489368 1490832 . + . ID=Thaps32807;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BYF1];external_name=Thaps32807;logic_name=jgi_thaps3 chr3 ensembl transcript 1489368 1490832 . + . ID=Thaps32807;Parent=Thaps32807;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1489368 1489403 . + 0 ID=Thaps32807;Parent=Thaps32807;rank=1 chr3 . exon 1489368 1489403 . + . ID=Thaps32807.1;Parent=Thaps32807;constitutive=1;rank=1 chr3 . CDS 1489513 1490407 . + 0 ID=Thaps32807;Parent=Thaps32807;rank=2 chr3 . exon 1489513 1490407 . + . ID=Thaps32807.2;Parent=Thaps32807;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1490498 1490832 . + 0 ID=Thaps32807;Parent=Thaps32807;rank=3 chr3 . exon 1490498 1490832 . + . ID=Thaps32807.3;Parent=Thaps32807;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1484596 1485661 . + . ID=Thaps3663;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYE9];external_name=Thaps3663;logic_name=jgi_thaps3 chr3 ensembl transcript 1484596 1485661 . + . ID=Thaps3663;Parent=Thaps3663;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1484596 1484738 . + 0 ID=Thaps3663;Parent=Thaps3663;rank=1 chr3 . exon 1484596 1484738 . + . ID=Thaps3663.1;Parent=Thaps3663;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1484767 1485661 . + 0 ID=Thaps3663;Parent=Thaps3663;rank=2 chr3 . exon 1484767 1485661 . + . ID=Thaps3663.2;Parent=Thaps3663;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1498572 1501610 . + . ID=Thaps15123;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYF3];external_name=Thaps15123;logic_name=jgi_thaps3 chr3 ensembl transcript 1498572 1501610 . + . ID=Thaps15123;Parent=Thaps15123;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1498572 1499177 . + 0 ID=Thaps15123;Parent=Thaps15123;rank=1 chr3 . exon 1498572 1499177 . + . ID=Thaps15123.1;Parent=Thaps15123;constitutive=1;rank=1 chr3 . CDS 1500936 1501158 . + 0 ID=Thaps15123;Parent=Thaps15123;rank=2 chr3 . exon 1500936 1501158 . + . ID=Thaps15123.2;Parent=Thaps15123;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1501417 1501610 . + 0 ID=Thaps15123;Parent=Thaps15123;rank=3 chr3 . exon 1501417 1501610 . + . ID=Thaps15123.3;Parent=Thaps15123;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1503622 1506864 . - . ID=Thaps21861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYF5];external_name=Thaps21861;logic_name=jgi_thaps3 chr3 ensembl transcript 1503622 1506864 . - . ID=Thaps21861;Parent=Thaps21861;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1503622 1506864 . - 0 ID=Thaps21861;Parent=Thaps21861;rank=1 chr3 . exon 1503622 1506864 . - . ID=Thaps21861.1;Parent=Thaps21861;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1502008 1503267 . - . ID=Thaps261867;biotype=protein_coding;description=Replication factor C 37 KD subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BYF4];external_name=RFC_2;logic_name=jgi_thaps3 chr3 ensembl transcript 1502008 1503267 . - . ID=Thaps261867;Parent=Thaps261867;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1502008 1502508 . - 0 ID=Thaps261867;Parent=Thaps261867;rank=3 chr3 . exon 1502008 1502508 . - . ID=Thaps261867.3;Parent=Thaps261867;constitutive=1;rank=3 chr3 . CDS 1502617 1502807 . - 0 ID=Thaps261867;Parent=Thaps261867;rank=2 chr3 . exon 1502617 1502807 . - . ID=Thaps261867.2;Parent=Thaps261867;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1502880 1503267 . - 0 ID=Thaps261867;Parent=Thaps261867;rank=1 chr3 . exon 1502880 1503267 . - . ID=Thaps261867.1;Parent=Thaps261867;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 1506144 1506185 . ? . description=trf chr3 . repeat_region 1507232 1507273 . ? . description=trf chr3 . biological_region 1512092 1512093 0.999 + . logic_name=eponine chr3 ensembl protein_coding_gene 1509443 1510627 . + . ID=Thaps21863;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYF7];external_name=Thaps21863;logic_name=jgi_thaps3 chr3 ensembl transcript 1509443 1510627 . + . ID=Thaps21863;Parent=Thaps21863;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1509443 1510627 . + 0 ID=Thaps21863;Parent=Thaps21863;rank=1 chr3 . exon 1509443 1510627 . + . ID=Thaps21863.1;Parent=Thaps21863;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1507411 1509204 . - . ID=Thaps268519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYF6];external_name=Thaps268519;logic_name=jgi_thaps3 chr3 ensembl transcript 1507411 1509204 . - . ID=Thaps268519;Parent=Thaps268519;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1507411 1508853 . - 0 ID=Thaps268519;Parent=Thaps268519;rank=2 chr3 . exon 1507411 1508853 . - . ID=Thaps268519.2;Parent=Thaps268519;constitutive=1;rank=2 chr3 . CDS 1509010 1509204 . - 0 ID=Thaps268519;Parent=Thaps268519;rank=1 chr3 . exon 1509010 1509204 . - . ID=Thaps268519.1;Parent=Thaps268519;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1512016 1513322 . + . ID=Thaps27550;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYF8];external_name=Thaps27550;logic_name=jgi_thaps3 chr3 ensembl transcript 1512016 1513322 . + . ID=Thaps27550;Parent=Thaps27550;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1512016 1512768 . + 0 ID=Thaps27550;Parent=Thaps27550;rank=1 chr3 . exon 1512016 1512768 . + . ID=Thaps27550.1;Parent=Thaps27550;constitutive=1;rank=1 chr3 . CDS 1512876 1513044 . + 0 ID=Thaps27550;Parent=Thaps27550;rank=2 chr3 . exon 1512876 1513044 . + . ID=Thaps27550.2;Parent=Thaps27550;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1513132 1513322 . + 0 ID=Thaps27550;Parent=Thaps27550;rank=3 chr3 . exon 1513132 1513322 . + . ID=Thaps27550.3;Parent=Thaps27550;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1513496 1514359 . - . ID=Thaps32880;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYF9];external_name=Thaps32880;logic_name=jgi_thaps3 chr3 ensembl transcript 1513496 1514359 . - . ID=Thaps32880;Parent=Thaps32880;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1513496 1514359 . - 0 ID=Thaps32880;Parent=Thaps32880;rank=1 chr3 . exon 1513496 1514359 . - . ID=Thaps32880.1;Parent=Thaps32880;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1516225 1517476 . - . ID=Thaps21865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG1];external_name=Thaps21865;logic_name=jgi_thaps3 chr3 ensembl transcript 1516225 1517476 . - . ID=Thaps21865;Parent=Thaps21865;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1516225 1516848 . - 0 ID=Thaps21865;Parent=Thaps21865;rank=2 chr3 . exon 1516225 1516848 . - . ID=Thaps21865.2;Parent=Thaps21865;constitutive=1;rank=2 chr3 . CDS 1516985 1517476 . - 0 ID=Thaps21865;Parent=Thaps21865;rank=1 chr3 . exon 1516985 1517476 . - . ID=Thaps21865.1;Parent=Thaps21865;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1520731 1522965 . + . ID=Thaps21866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG3];external_name=Thaps21866;logic_name=jgi_thaps3 chr3 ensembl transcript 1520731 1522965 . + . ID=Thaps21866;Parent=Thaps21866;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1520731 1522965 . + 0 ID=Thaps21866;Parent=Thaps21866;rank=1 chr3 . exon 1520731 1522965 . + . ID=Thaps21866.1;Parent=Thaps21866;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1523480 1524899 . + . ID=Thaps21867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG4];external_name=Thaps21867;logic_name=jgi_thaps3 chr3 ensembl transcript 1523480 1524899 . + . ID=Thaps21867;Parent=Thaps21867;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1523480 1523714 . + 0 ID=Thaps21867;Parent=Thaps21867;rank=1 chr3 . exon 1523480 1523714 . + . ID=Thaps21867.1;Parent=Thaps21867;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1523798 1523912 . + 0 ID=Thaps21867;Parent=Thaps21867;rank=2 chr3 . exon 1523798 1523912 . + . ID=Thaps21867.2;Parent=Thaps21867;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1524083 1524899 . + 0 ID=Thaps21867;Parent=Thaps21867;rank=3 chr3 ensembl protein_coding_gene 1514930 1516024 . - . ID=Thaps3674;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG0];external_name=Thaps3674;logic_name=jgi_thaps3 chr3 ensembl transcript 1514930 1516024 . - . ID=Thaps3674;Parent=Thaps3674;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1514930 1516024 . - 0 ID=Thaps3674;Parent=Thaps3674;rank=1 chr3 . exon 1514930 1516024 . - . ID=Thaps3674.1;Parent=Thaps3674;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1519183 1520413 . - . ID=Thaps3676;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG2];external_name=Thaps3676;logic_name=jgi_thaps3 chr3 ensembl transcript 1519183 1520413 . - . ID=Thaps3676;Parent=Thaps3676;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1519183 1519830 . - 0 ID=Thaps3676;Parent=Thaps3676;rank=2 chr3 . exon 1519183 1519830 . - . ID=Thaps3676.2;Parent=Thaps3676;constitutive=1;rank=2 chr3 . CDS 1519976 1520413 . - 0 ID=Thaps3676;Parent=Thaps3676;rank=1 chr3 . exon 1519976 1520413 . - . ID=Thaps3676.1;Parent=Thaps3676;constitutive=1;rank=1 chr3 . repeat_region 1525443 1525481 . ? . description=dust chr3 . repeat_region 1525449 1525481 . ? . description=trf chr3 . repeat_region 1531853 1531978 . ? . description=trf chr3 . exon 1524083 1524899 . + . ID=Thaps21867.3;Parent=Thaps21867;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 1525290 1527941 . - . ID=Thaps21868;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG5];external_name=Thaps21868;logic_name=jgi_thaps3 chr3 ensembl transcript 1525290 1527941 . - . ID=Thaps21868;Parent=Thaps21868;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1525290 1526027 . - 0 ID=Thaps21868;Parent=Thaps21868;rank=2 chr3 . exon 1525290 1526027 . - . ID=Thaps21868.2;Parent=Thaps21868;constitutive=1;rank=2 chr3 . CDS 1526127 1527941 . - 0 ID=Thaps21868;Parent=Thaps21868;rank=1 chr3 . exon 1526127 1527941 . - . ID=Thaps21868.1;Parent=Thaps21868;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1532649 1538475 . - . ID=Thaps21869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG7];external_name=Thaps21869;logic_name=jgi_thaps3 chr3 ensembl transcript 1532649 1538475 . - . ID=Thaps21869;Parent=Thaps21869;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1532649 1533268 . - 0 ID=Thaps21869;Parent=Thaps21869;rank=7 chr3 . exon 1532649 1533268 . - . ID=Thaps21869.7;Parent=Thaps21869;constitutive=1;ensembl_end_phase=2;rank=7 chr3 . CDS 1533373 1533863 . - 0 ID=Thaps21869;Parent=Thaps21869;rank=6 chr3 . exon 1533373 1533863 . - . ID=Thaps21869.6;Parent=Thaps21869;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 1533952 1535345 . - 0 ID=Thaps21869;Parent=Thaps21869;rank=5 chr3 . CDS 1535572 1536745 . - 0 ID=Thaps21869;Parent=Thaps21869;rank=4 chr3 . CDS 1536950 1537116 . - 0 ID=Thaps21869;Parent=Thaps21869;rank=3 chr3 . CDS 1537197 1537963 . - 0 ID=Thaps21869;Parent=Thaps21869;rank=2 chr3 . CDS 1538076 1538475 . - 0 ID=Thaps21869;Parent=Thaps21869;rank=1 chr3 ensembl protein_coding_gene 1528200 1530149 . + . ID=Thaps3680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG6];external_name=Thaps3680;logic_name=jgi_thaps3 chr3 ensembl transcript 1528200 1530149 . + . ID=Thaps3680;Parent=Thaps3680;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1528200 1530149 . + 0 ID=Thaps3680;Parent=Thaps3680;rank=1 chr3 . exon 1528200 1530149 . + . ID=Thaps3680.1;Parent=Thaps3680;constitutive=1;rank=1 chr3 . exon 1533952 1535345 . - . ID=Thaps21869.5;Parent=Thaps21869;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . exon 1535572 1536745 . - . ID=Thaps21869.4;Parent=Thaps21869;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . exon 1536950 1537116 . - . ID=Thaps21869.3;Parent=Thaps21869;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . exon 1537197 1537963 . - . ID=Thaps21869.2;Parent=Thaps21869;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 1538076 1538475 . - . ID=Thaps21869.1;Parent=Thaps21869;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1538969 1541767 . - . ID=Thaps21870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG8];external_name=Thaps21870;logic_name=jgi_thaps3 chr3 ensembl transcript 1538969 1541767 . - . ID=Thaps21870;Parent=Thaps21870;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1538969 1541767 . - 0 ID=Thaps21870;Parent=Thaps21870;rank=1 chr3 . exon 1538969 1541767 . - . ID=Thaps21870.1;Parent=Thaps21870;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1542376 1543541 . + . ID=Thaps21871;biotype=protein_coding;description=40S ribosomal protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYG9];external_name=RSP1;logic_name=jgi_thaps3 chr3 ensembl transcript 1542376 1543541 . + . ID=Thaps21871;Parent=Thaps21871;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1542376 1543059 . + 0 ID=Thaps21871;Parent=Thaps21871;rank=1 chr3 . exon 1542376 1543059 . + . ID=Thaps21871.1;Parent=Thaps21871;constitutive=1;rank=1 chr3 . CDS 1543494 1543541 . + 0 ID=Thaps21871;Parent=Thaps21871;rank=2 chr3 . exon 1543494 1543541 . + . ID=Thaps21871.2;Parent=Thaps21871;constitutive=1;rank=2 chr3 . repeat_region 1543939 1544001 . ? . description=trf chr3 . repeat_region 1544038 1544045 . ? . description=dust chr3 . repeat_region 1552966 1552973 . ? . description=dust chr3 ensembl protein_coding_gene 1544342 1547533 . + . ID=Thaps27556;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYH0];external_name=Thaps27556;logic_name=jgi_thaps3 chr3 ensembl transcript 1544342 1547533 . + . ID=Thaps27556;Parent=Thaps27556;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1544342 1544423 . + 0 ID=Thaps27556;Parent=Thaps27556;rank=1 chr3 . exon 1544342 1544423 . + . ID=Thaps27556.1;Parent=Thaps27556;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1544493 1544777 . + 0 ID=Thaps27556;Parent=Thaps27556;rank=2 chr3 . exon 1544493 1544777 . + . ID=Thaps27556.2;Parent=Thaps27556;constitutive=1;rank=2 chr3 . CDS 1544838 1546597 . + 0 ID=Thaps27556;Parent=Thaps27556;rank=3 chr3 . exon 1544838 1546597 . + . ID=Thaps27556.3;Parent=Thaps27556;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1546733 1547533 . + 0 ID=Thaps27556;Parent=Thaps27556;rank=4 chr3 . exon 1546733 1547533 . + . ID=Thaps27556.4;Parent=Thaps27556;constitutive=1;rank=4 chr3 ensembl protein_coding_gene 1547986 1550199 . + . ID=Thaps27557;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BYH1];external_name=Thaps27557;logic_name=jgi_thaps3 chr3 ensembl transcript 1547986 1550199 . + . ID=Thaps27557;Parent=Thaps27557;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1547986 1548090 . + 0 ID=Thaps27557;Parent=Thaps27557;rank=1 chr3 . exon 1547986 1548090 . + . ID=Thaps27557.1;Parent=Thaps27557;constitutive=1;rank=1 chr3 . CDS 1548179 1548668 . + 0 ID=Thaps27557;Parent=Thaps27557;rank=2 chr3 . exon 1548179 1548668 . + . ID=Thaps27557.2;Parent=Thaps27557;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1548766 1549349 . + 0 ID=Thaps27557;Parent=Thaps27557;rank=3 chr3 . exon 1548766 1549349 . + . ID=Thaps27557.3;Parent=Thaps27557;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1549447 1549650 . + 0 ID=Thaps27557;Parent=Thaps27557;rank=4 chr3 . exon 1549447 1549650 . + . ID=Thaps27557.4;Parent=Thaps27557;constitutive=1;rank=4 chr3 . CDS 1549741 1550199 . + 0 ID=Thaps27557;Parent=Thaps27557;rank=5 chr3 . exon 1549741 1550199 . + . ID=Thaps27557.5;Parent=Thaps27557;constitutive=1;rank=5 chr3 ensembl protein_coding_gene 1550739 1551386 . - . ID=Thaps32964;biotype=protein_coding;description=Photosystem II reaction center M protein%2C plastid [Source:UniProtKB/TrEMBL%3BAcc:B8BYH2];external_name=PSBM;logic_name=jgi_thaps3 chr3 ensembl transcript 1550739 1551386 . - . ID=Thaps32964;Parent=Thaps32964;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1550739 1550991 . - 0 ID=Thaps32964;Parent=Thaps32964;rank=2 chr3 . exon 1550739 1550991 . - . ID=Thaps32964.2;Parent=Thaps32964;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1551304 1551386 . - 0 ID=Thaps32964;Parent=Thaps32964;rank=1 chr3 . exon 1551304 1551386 . - . ID=Thaps32964.1;Parent=Thaps32964;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1551987 1554371 . + . ID=Thaps40001;biotype=protein_coding;description=Translation factor GUF1 homolog%2C mitochondrial [Source:UniProtKB/Swiss-Prot%3BAcc:B8BYH3];external_name=Thaps40001;logic_name=jgi_thaps3 chr3 ensembl transcript 1551987 1554371 . + . ID=Thaps40001;Parent=Thaps40001;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1551987 1552583 . + 0 ID=Thaps40001;Parent=Thaps40001;rank=1 chr3 . exon 1551987 1552583 . + . ID=Thaps40001.1;Parent=Thaps40001;constitutive=1;rank=1 chr3 . CDS 1552668 1552809 . + 0 ID=Thaps40001;Parent=Thaps40001;rank=2 chr3 . exon 1552668 1552809 . + . ID=Thaps40001.2;Parent=Thaps40001;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1552901 1553333 . + 0 ID=Thaps40001;Parent=Thaps40001;rank=3 chr3 . exon 1552901 1553333 . + . ID=Thaps40001.3;Parent=Thaps40001;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1553423 1554371 . + 0 ID=Thaps40001;Parent=Thaps40001;rank=4 chr3 . exon 1553423 1554371 . + . ID=Thaps40001.4;Parent=Thaps40001;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . repeat_region 1563292 1563504 . - . description=tp14_ASNotSingleton chr3 ensembl protein_coding_gene 1556846 1557772 . - . ID=Thaps32934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYH5];external_name=Thaps32934;logic_name=jgi_thaps3 chr3 ensembl transcript 1556846 1557772 . - . ID=Thaps32934;Parent=Thaps32934;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1556846 1557169 . - 0 ID=Thaps32934;Parent=Thaps32934;rank=3 chr3 . exon 1556846 1557169 . - . ID=Thaps32934.3;Parent=Thaps32934;constitutive=1;rank=3 chr3 . CDS 1557282 1557415 . - 0 ID=Thaps32934;Parent=Thaps32934;rank=2 chr3 . exon 1557282 1557415 . - . ID=Thaps32934.2;Parent=Thaps32934;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1557514 1557772 . - 0 ID=Thaps32934;Parent=Thaps32934;rank=1 chr3 . exon 1557514 1557772 . - . ID=Thaps32934.1;Parent=Thaps32934;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1554857 1556392 . + . ID=Thaps3688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYH4];external_name=Thaps3688;logic_name=jgi_thaps3 chr3 ensembl transcript 1554857 1556392 . + . ID=Thaps3688;Parent=Thaps3688;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1554857 1556392 . + 0 ID=Thaps3688;Parent=Thaps3688;rank=1 chr3 . exon 1554857 1556392 . + . ID=Thaps3688.1;Parent=Thaps3688;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1559744 1561106 . + . ID=Thaps3690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYH6];external_name=Thaps3690;logic_name=jgi_thaps3 chr3 ensembl transcript 1559744 1561106 . + . ID=Thaps3690;Parent=Thaps3690;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1559744 1560085 . + 0 ID=Thaps3690;Parent=Thaps3690;rank=1 chr3 . exon 1559744 1560085 . + . ID=Thaps3690.1;Parent=Thaps3690;constitutive=1;rank=1 chr3 . CDS 1560163 1560621 . + 0 ID=Thaps3690;Parent=Thaps3690;rank=2 chr3 . exon 1560163 1560621 . + . ID=Thaps3690.2;Parent=Thaps3690;constitutive=1;rank=2 chr3 . CDS 1560720 1561106 . + 0 ID=Thaps3690;Parent=Thaps3690;rank=3 chr3 . exon 1560720 1561106 . + . ID=Thaps3690.3;Parent=Thaps3690;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1561709 1562407 . + . ID=Thaps3691;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYH7];external_name=Thaps3691;logic_name=jgi_thaps3 chr3 ensembl transcript 1561709 1562407 . + . ID=Thaps3691;Parent=Thaps3691;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1561709 1562407 . + 0 ID=Thaps3691;Parent=Thaps3691;rank=1 chr3 . exon 1561709 1562407 . + . ID=Thaps3691.1;Parent=Thaps3691;constitutive=1;rank=1 chr3 . repeat_region 1563836 1564079 . - . description=TE2_TP chr3 . repeat_region 1565812 1565841 . ? . description=trf chr3 . repeat_region 1567559 1567566 . ? . description=dust chr3 . repeat_region 1569614 1569768 . + . description=Gypsy1I_TP chr3 . repeat_region 1569769 1569945 . - . description=Copia3LTR_TP chr3 . repeat_region 1569945 1570883 . + . description=Gypsy1I_TP chr3 . repeat_region 1570884 1571063 . + . description=Gypsy1ALTR_TP chr3 ensembl protein_coding_gene 1565252 1566452 . - . ID=Thaps21875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYH8];external_name=Thaps21875;logic_name=jgi_thaps3 chr3 ensembl transcript 1565252 1566452 . - . ID=Thaps21875;Parent=Thaps21875;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1565252 1565737 . - 0 ID=Thaps21875;Parent=Thaps21875;rank=2 chr3 . exon 1565252 1565737 . - . ID=Thaps21875.2;Parent=Thaps21875;constitutive=1;rank=2 chr3 . CDS 1565841 1566452 . - 0 ID=Thaps21875;Parent=Thaps21875;rank=1 chr3 . exon 1565841 1566452 . - . ID=Thaps21875.1;Parent=Thaps21875;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1568118 1569236 . - . ID=Thaps3693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYH9];external_name=Thaps3693;logic_name=jgi_thaps3 chr3 ensembl transcript 1568118 1569236 . - . ID=Thaps3693;Parent=Thaps3693;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1568118 1568241 . - 0 ID=Thaps3693;Parent=Thaps3693;rank=3 chr3 . exon 1568118 1568241 . - . ID=Thaps3693.3;Parent=Thaps3693;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1568327 1568424 . - 0 ID=Thaps3693;Parent=Thaps3693;rank=2 chr3 . exon 1568327 1568424 . - . ID=Thaps3693.2;Parent=Thaps3693;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1568544 1569236 . - 0 ID=Thaps3693;Parent=Thaps3693;rank=1 chr3 . exon 1568544 1569236 . - . ID=Thaps3693.1;Parent=Thaps3693;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1571148 1576796 . + . ID=Thaps3694;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYI0];external_name=Thaps3694;logic_name=jgi_thaps3 chr3 ensembl transcript 1571148 1576796 . + . ID=Thaps3694;Parent=Thaps3694;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1571148 1571380 . + 0 ID=Thaps3694;Parent=Thaps3694;rank=1 chr3 . exon 1571148 1571380 . + . ID=Thaps3694.1;Parent=Thaps3694;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1571611 1571669 . + 0 ID=Thaps3694;Parent=Thaps3694;rank=2 chr3 . exon 1571611 1571669 . + . ID=Thaps3694.2;Parent=Thaps3694;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1571768 1572622 . + 0 ID=Thaps3694;Parent=Thaps3694;rank=3 chr3 . exon 1571768 1572622 . + . ID=Thaps3694.3;Parent=Thaps3694;constitutive=1;rank=3 chr3 . CDS 1572689 1573074 . + 0 ID=Thaps3694;Parent=Thaps3694;rank=4 chr3 . exon 1572689 1573074 . + . ID=Thaps3694.4;Parent=Thaps3694;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1573153 1574352 . + 0 ID=Thaps3694;Parent=Thaps3694;rank=5 chr3 . exon 1573153 1574352 . + . ID=Thaps3694.5;Parent=Thaps3694;constitutive=1;rank=5 chr3 . CDS 1574427 1574857 . + 0 ID=Thaps3694;Parent=Thaps3694;rank=6 chr3 . CDS 1575028 1575211 . + 0 ID=Thaps3694;Parent=Thaps3694;rank=7 chr3 . CDS 1575271 1576496 . + 0 ID=Thaps3694;Parent=Thaps3694;rank=8 chr3 . CDS 1576595 1576796 . + 0 ID=Thaps3694;Parent=Thaps3694;rank=9 chr3 ensembl protein_coding_gene 1582237 1583656 . - . ID=Thaps21877;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYI2];external_name=Thaps21877;logic_name=jgi_thaps3 chr3 ensembl transcript 1582237 1583656 . - . ID=Thaps21877;Parent=Thaps21877;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1582237 1582641 . - 0 ID=Thaps21877;Parent=Thaps21877;rank=2 chr3 . exon 1582237 1582641 . - . ID=Thaps21877.2;Parent=Thaps21877;constitutive=1;rank=2 chr3 . CDS 1582718 1583656 . - 0 ID=Thaps21877;Parent=Thaps21877;rank=1 chr3 . exon 1582718 1583656 . - . ID=Thaps21877.1;Parent=Thaps21877;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1577488 1580152 . + . ID=Thaps32522;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYI1];external_name=Thaps32522;logic_name=jgi_thaps3 chr3 ensembl transcript 1577488 1580152 . + . ID=Thaps32522;Parent=Thaps32522;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1577488 1577867 . + 0 ID=Thaps32522;Parent=Thaps32522;rank=1 chr3 . exon 1577488 1577867 . + . ID=Thaps32522.1;Parent=Thaps32522;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1577963 1578134 . + 0 ID=Thaps32522;Parent=Thaps32522;rank=2 chr3 . exon 1577963 1578134 . + . ID=Thaps32522.2;Parent=Thaps32522;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1578177 1578826 . + 0 ID=Thaps32522;Parent=Thaps32522;rank=3 chr3 . exon 1578177 1578826 . + . ID=Thaps32522.3;Parent=Thaps32522;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1578934 1579365 . + 0 ID=Thaps32522;Parent=Thaps32522;rank=4 chr3 . exon 1578934 1579365 . + . ID=Thaps32522.4;Parent=Thaps32522;constitutive=1;rank=4 chr3 . CDS 1579483 1579803 . + 0 ID=Thaps32522;Parent=Thaps32522;rank=5 chr3 . exon 1579483 1579803 . + . ID=Thaps32522.5;Parent=Thaps32522;constitutive=1;rank=5 chr3 . CDS 1579870 1580152 . + 0 ID=Thaps32522;Parent=Thaps32522;rank=6 chr3 . exon 1579870 1580152 . + . ID=Thaps32522.6;Parent=Thaps32522;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . exon 1574427 1574857 . + . ID=Thaps3694.6;Parent=Thaps3694;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . exon 1575028 1575211 . + . ID=Thaps3694.7;Parent=Thaps3694;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . exon 1575271 1576496 . + . ID=Thaps3694.8;Parent=Thaps3694;constitutive=1;ensembl_end_phase=2;rank=8 chr3 . exon 1576595 1576796 . + . ID=Thaps3694.9;Parent=Thaps3694;constitutive=1;ensembl_end_phase=1;rank=9 chr3 . repeat_region 1583809 1583821 . ? . description=dust chr3 . repeat_region 1591066 1591097 . ? . description=trf chr3 ensembl protein_coding_gene 1589949 1590854 . + . ID=Thaps21879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYI6];external_name=Thaps21879;logic_name=jgi_thaps3 chr3 ensembl transcript 1589949 1590854 . + . ID=Thaps21879;Parent=Thaps21879;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1589949 1590854 . + 0 ID=Thaps21879;Parent=Thaps21879;rank=1 chr3 . exon 1589949 1590854 . + . ID=Thaps21879.1;Parent=Thaps21879;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1591096 1593466 . - . ID=Thaps21880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYI7];external_name=Thaps21880;logic_name=jgi_thaps3 chr3 ensembl transcript 1591096 1593466 . - . ID=Thaps21880;Parent=Thaps21880;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1591096 1592894 . - 0 ID=Thaps21880;Parent=Thaps21880;rank=2 chr3 . exon 1591096 1592894 . - . ID=Thaps21880.2;Parent=Thaps21880;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1592923 1593466 . - 0 ID=Thaps21880;Parent=Thaps21880;rank=1 chr3 . exon 1592923 1593466 . - . ID=Thaps21880.1;Parent=Thaps21880;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1586677 1587636 . + . ID=Thaps32945;biotype=protein_coding;description=Precursor of hydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BYI4];external_name=SDH1;logic_name=jgi_thaps3 chr3 ensembl transcript 1586677 1587636 . + . ID=Thaps32945;Parent=Thaps32945;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1586677 1586727 . + 0 ID=Thaps32945;Parent=Thaps32945;rank=1 chr3 . exon 1586677 1586727 . + . ID=Thaps32945.1;Parent=Thaps32945;constitutive=1;rank=1 chr3 . CDS 1586835 1587120 . + 0 ID=Thaps32945;Parent=Thaps32945;rank=2 chr3 . exon 1586835 1587120 . + . ID=Thaps32945.2;Parent=Thaps32945;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1587251 1587636 . + 0 ID=Thaps32945;Parent=Thaps32945;rank=3 chr3 . exon 1587251 1587636 . + . ID=Thaps32945.3;Parent=Thaps32945;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1584088 1586119 . + . ID=Thaps33072;biotype=protein_coding;description=Sec1-family transport protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYI3];external_name=Thaps33072;logic_name=jgi_thaps3 chr3 ensembl transcript 1584088 1586119 . + . ID=Thaps33072;Parent=Thaps33072;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1584088 1584624 . + 0 ID=Thaps33072;Parent=Thaps33072;rank=1 chr3 . exon 1584088 1584624 . + . ID=Thaps33072.1;Parent=Thaps33072;constitutive=1;rank=1 chr3 . CDS 1584722 1585583 . + 0 ID=Thaps33072;Parent=Thaps33072;rank=2 chr3 . exon 1584722 1585583 . + . ID=Thaps33072.2;Parent=Thaps33072;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1585707 1586119 . + 0 ID=Thaps33072;Parent=Thaps33072;rank=3 chr3 . exon 1585707 1586119 . + . ID=Thaps33072.3;Parent=Thaps33072;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1587994 1588852 . - . ID=Thaps3698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYI5];external_name=Thaps3698;logic_name=jgi_thaps3 chr3 ensembl transcript 1587994 1588852 . - . ID=Thaps3698;Parent=Thaps3698;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1587994 1588497 . - 0 ID=Thaps3698;Parent=Thaps3698;rank=2 chr3 . exon 1587994 1588497 . - . ID=Thaps3698.2;Parent=Thaps3698;constitutive=1;rank=2 chr3 . CDS 1588583 1588852 . - 0 ID=Thaps3698;Parent=Thaps3698;rank=1 chr3 . exon 1588583 1588852 . - . ID=Thaps3698.1;Parent=Thaps3698;constitutive=1;rank=1 chr3 . biological_region 1593821 1593822 0.999 - . logic_name=eponine chr3 ensembl protein_coding_gene 1598383 1599385 . + . ID=Thaps21882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ0];external_name=Thaps21882;logic_name=jgi_thaps3 chr3 ensembl transcript 1598383 1599385 . + . ID=Thaps21882;Parent=Thaps21882;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1598383 1599344 . + 0 ID=Thaps21882;Parent=Thaps21882;rank=1 chr3 . exon 1598383 1599344 . + . ID=Thaps21882.1;Parent=Thaps21882;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1599373 1599385 . + 0 ID=Thaps21882;Parent=Thaps21882;rank=2 chr3 . exon 1599373 1599385 . + . ID=Thaps21882.2;Parent=Thaps21882;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1594090 1594253 . + . ID=Thaps261876;biotype=protein_coding;description=Putative uncharacterized protein ZFP9 [Source:UniProtKB/TrEMBL%3BAcc:B8BYI8];external_name=ZFP9;logic_name=jgi_thaps3 chr3 ensembl transcript 1594090 1594253 . + . ID=Thaps261876;Parent=Thaps261876;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1594090 1594253 . + 0 ID=Thaps261876;Parent=Thaps261876;rank=1 chr3 . exon 1594090 1594253 . + . ID=Thaps261876.1;Parent=Thaps261876;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1595752 1597015 . - . ID=Thaps3702;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYI9];external_name=Thaps3702;logic_name=jgi_thaps3 chr3 ensembl transcript 1595752 1597015 . - . ID=Thaps3702;Parent=Thaps3702;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1595752 1596700 . - 0 ID=Thaps3702;Parent=Thaps3702;rank=2 chr3 . exon 1595752 1596700 . - . ID=Thaps3702.2;Parent=Thaps3702;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1596810 1597015 . - 0 ID=Thaps3702;Parent=Thaps3702;rank=1 chr3 . exon 1596810 1597015 . - . ID=Thaps3702.1;Parent=Thaps3702;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1599753 1604799 . - . ID=Thaps3704;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ1];external_name=Thaps3704;logic_name=jgi_thaps3 chr3 ensembl transcript 1599753 1604799 . - . ID=Thaps3704;Parent=Thaps3704;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1599753 1599940 . - 0 ID=Thaps3704;Parent=Thaps3704;rank=3 chr3 . exon 1599753 1599940 . - . ID=Thaps3704.3;Parent=Thaps3704;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1599960 1602943 . - 0 ID=Thaps3704;Parent=Thaps3704;rank=2 chr3 . exon 1599960 1602943 . - . ID=Thaps3704.2;Parent=Thaps3704;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1603145 1604799 . - 0 ID=Thaps3704;Parent=Thaps3704;rank=1 chr3 . exon 1603145 1604799 . - . ID=Thaps3704.1;Parent=Thaps3704;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1611921 1613560 . - . ID=Thaps261878;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ6];external_name=Thaps261878;logic_name=jgi_thaps3 chr3 ensembl transcript 1611921 1613560 . - . ID=Thaps261878;Parent=Thaps261878;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1611921 1612526 . - 0 ID=Thaps261878;Parent=Thaps261878;rank=5 chr3 . exon 1611921 1612526 . - . ID=Thaps261878.5;Parent=Thaps261878;constitutive=1;rank=5 chr3 . CDS 1612560 1612829 . - 0 ID=Thaps261878;Parent=Thaps261878;rank=4 chr3 . exon 1612560 1612829 . - . ID=Thaps261878.4;Parent=Thaps261878;constitutive=1;rank=4 chr3 . CDS 1613166 1613276 . - 0 ID=Thaps261878;Parent=Thaps261878;rank=3 chr3 . exon 1613166 1613276 . - . ID=Thaps261878.3;Parent=Thaps261878;constitutive=1;rank=3 chr3 . CDS 1613346 1613434 . - 0 ID=Thaps261878;Parent=Thaps261878;rank=2 chr3 . exon 1613346 1613434 . - . ID=Thaps261878.2;Parent=Thaps261878;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1613518 1613560 . - 0 ID=Thaps261878;Parent=Thaps261878;rank=1 chr3 . exon 1613518 1613560 . - . ID=Thaps261878.1;Parent=Thaps261878;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1605218 1606329 . + . ID=Thaps27564;biotype=protein_coding;description=Chorismate mutase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ2];external_name=Thaps27564;logic_name=jgi_thaps3 chr3 ensembl transcript 1605218 1606329 . + . ID=Thaps27564;Parent=Thaps27564;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1605218 1605529 . + 0 ID=Thaps27564;Parent=Thaps27564;rank=1 chr3 . exon 1605218 1605529 . + . ID=Thaps27564.1;Parent=Thaps27564;constitutive=1;rank=1 chr3 . CDS 1605643 1606105 . + 0 ID=Thaps27564;Parent=Thaps27564;rank=2 chr3 . exon 1605643 1606105 . + . ID=Thaps27564.2;Parent=Thaps27564;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1606184 1606329 . + 0 ID=Thaps27564;Parent=Thaps27564;rank=3 chr3 . exon 1606184 1606329 . + . ID=Thaps27564.3;Parent=Thaps27564;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1606567 1607034 . - . ID=Thaps3706;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ3];external_name=Thaps3706;logic_name=jgi_thaps3 chr3 ensembl transcript 1606567 1607034 . - . ID=Thaps3706;Parent=Thaps3706;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1606567 1607034 . - 0 ID=Thaps3706;Parent=Thaps3706;rank=1 chr3 . exon 1606567 1607034 . - . ID=Thaps3706.1;Parent=Thaps3706;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1608609 1609377 . - . ID=Thaps3707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ4];external_name=Thaps3707;logic_name=jgi_thaps3 chr3 ensembl transcript 1608609 1609377 . - . ID=Thaps3707;Parent=Thaps3707;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1608609 1609220 . - 0 ID=Thaps3707;Parent=Thaps3707;rank=2 chr3 . exon 1608609 1609220 . - . ID=Thaps3707.2;Parent=Thaps3707;constitutive=1;rank=2 chr3 . CDS 1609312 1609377 . - 0 ID=Thaps3707;Parent=Thaps3707;rank=1 chr3 . exon 1609312 1609377 . - . ID=Thaps3707.1;Parent=Thaps3707;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1609802 1611789 . + . ID=Thaps3708;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ5];external_name=Thaps3708;logic_name=jgi_thaps3 chr3 ensembl transcript 1609802 1611789 . + . ID=Thaps3708;Parent=Thaps3708;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1609802 1609939 . + 0 ID=Thaps3708;Parent=Thaps3708;rank=1 chr3 . exon 1609802 1609939 . + . ID=Thaps3708.1;Parent=Thaps3708;constitutive=1;rank=1 chr3 . CDS 1610065 1611789 . + 0 ID=Thaps3708;Parent=Thaps3708;rank=2 chr3 . exon 1610065 1611789 . + . ID=Thaps3708.2;Parent=Thaps3708;constitutive=1;rank=2 chr3 . repeat_region 1615875 1615890 . ? . description=dust chr3 . repeat_region 1619817 1619854 . ? . description=trf chr3 ensembl protein_coding_gene 1621171 1624335 . - . ID=Thaps21885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ9];external_name=Thaps21885;logic_name=jgi_thaps3 chr3 ensembl transcript 1621171 1624335 . - . ID=Thaps21885;Parent=Thaps21885;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1621171 1621511 . - 0 ID=Thaps21885;Parent=Thaps21885;rank=3 chr3 . exon 1621171 1621511 . - . ID=Thaps21885.3;Parent=Thaps21885;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1621564 1622152 . - 0 ID=Thaps21885;Parent=Thaps21885;rank=2 chr3 . exon 1621564 1622152 . - . ID=Thaps21885.2;Parent=Thaps21885;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1622230 1624335 . - 0 ID=Thaps21885;Parent=Thaps21885;rank=1 chr3 . exon 1622230 1624335 . - . ID=Thaps21885.1;Parent=Thaps21885;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1619705 1620418 . + . ID=Thaps32766;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ8];external_name=Thaps32766;logic_name=jgi_thaps3 chr3 ensembl transcript 1619705 1620418 . + . ID=Thaps32766;Parent=Thaps32766;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1619705 1619800 . + 0 ID=Thaps32766;Parent=Thaps32766;rank=1 chr3 . exon 1619705 1619800 . + . ID=Thaps32766.1;Parent=Thaps32766;constitutive=1;rank=1 chr3 . CDS 1619960 1620418 . + 0 ID=Thaps32766;Parent=Thaps32766;rank=2 chr3 . exon 1619960 1620418 . + . ID=Thaps32766.2;Parent=Thaps32766;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 1618451 1618840 . + . ID=Thaps3710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYJ7];external_name=Thaps3710;logic_name=jgi_thaps3 chr3 ensembl transcript 1618451 1618840 . + . ID=Thaps3710;Parent=Thaps3710;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1618451 1618840 . + 0 ID=Thaps3710;Parent=Thaps3710;rank=1 chr3 . exon 1618451 1618840 . + . ID=Thaps3710.1;Parent=Thaps3710;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1624837 1627455 . - . ID=Thaps21886;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK0];external_name=Thaps21886;logic_name=jgi_thaps3 chr3 ensembl transcript 1624837 1627455 . - . ID=Thaps21886;Parent=Thaps21886;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1624837 1626215 . - 0 ID=Thaps21886;Parent=Thaps21886;rank=2 chr3 . exon 1624837 1626215 . - . ID=Thaps21886.2;Parent=Thaps21886;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1626303 1627455 . - 0 ID=Thaps21886;Parent=Thaps21886;rank=1 chr3 . exon 1626303 1627455 . - . ID=Thaps21886.1;Parent=Thaps21886;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1628221 1629030 . + . ID=Thaps21887;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK1];external_name=Thaps21887;logic_name=jgi_thaps3 chr3 ensembl transcript 1628221 1629030 . + . ID=Thaps21887;Parent=Thaps21887;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1628221 1629030 . + 0 ID=Thaps21887;Parent=Thaps21887;rank=1 chr3 . exon 1628221 1629030 . + . ID=Thaps21887.1;Parent=Thaps21887;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1631828 1633820 . - . ID=Thaps21888;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK3];external_name=Thaps21888;logic_name=jgi_thaps3 chr3 ensembl transcript 1631828 1633820 . - . ID=Thaps21888;Parent=Thaps21888;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1631828 1632587 . - 0 ID=Thaps21888;Parent=Thaps21888;rank=2 chr3 . exon 1631828 1632587 . - . ID=Thaps21888.2;Parent=Thaps21888;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1632877 1633820 . - 0 ID=Thaps21888;Parent=Thaps21888;rank=1 chr3 . exon 1632877 1633820 . - . ID=Thaps21888.1;Parent=Thaps21888;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1630458 1631608 . + . ID=Thaps3715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK2];external_name=Thaps3715;logic_name=jgi_thaps3 chr3 ensembl transcript 1630458 1631608 . + . ID=Thaps3715;Parent=Thaps3715;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1630458 1630802 . + 0 ID=Thaps3715;Parent=Thaps3715;rank=1 chr3 . exon 1630458 1630802 . + . ID=Thaps3715.1;Parent=Thaps3715;constitutive=1;rank=1 chr3 . CDS 1630912 1630946 . + 0 ID=Thaps3715;Parent=Thaps3715;rank=2 chr3 . exon 1630912 1630946 . + . ID=Thaps3715.2;Parent=Thaps3715;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1631038 1631608 . + 0 ID=Thaps3715;Parent=Thaps3715;rank=3 chr3 . exon 1631038 1631608 . + . ID=Thaps3715.3;Parent=Thaps3715;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . repeat_region 1633681 1633723 . ? . description=trf chr3 . repeat_region 1640659 1640666 . ? . description=dust chr3 ensembl protein_coding_gene 1636591 1640662 . - . ID=Thaps12602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK4];external_name=Thaps12602;logic_name=jgi_thaps3 chr3 ensembl transcript 1636591 1640662 . - . ID=Thaps12602;Parent=Thaps12602;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1636591 1636650 . - 0 ID=Thaps12602;Parent=Thaps12602;rank=8 chr3 . exon 1636591 1636650 . - . ID=Thaps12602.8;Parent=Thaps12602;constitutive=1;rank=8 chr3 . CDS 1637206 1637512 . - 0 ID=Thaps12602;Parent=Thaps12602;rank=7 chr3 . exon 1637206 1637512 . - . ID=Thaps12602.7;Parent=Thaps12602;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . CDS 1637684 1637903 . - 0 ID=Thaps12602;Parent=Thaps12602;rank=6 chr3 . exon 1637684 1637903 . - . ID=Thaps12602.6;Parent=Thaps12602;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 1638108 1638396 . - 0 ID=Thaps12602;Parent=Thaps12602;rank=5 chr3 . exon 1638108 1638396 . - . ID=Thaps12602.5;Parent=Thaps12602;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1638469 1638941 . - 0 ID=Thaps12602;Parent=Thaps12602;rank=4 chr3 . exon 1638469 1638941 . - . ID=Thaps12602.4;Parent=Thaps12602;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1639111 1639858 . - 0 ID=Thaps12602;Parent=Thaps12602;rank=3 chr3 . exon 1639111 1639858 . - . ID=Thaps12602.3;Parent=Thaps12602;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1639979 1640108 . - 0 ID=Thaps12602;Parent=Thaps12602;rank=2 chr3 . exon 1639979 1640108 . - . ID=Thaps12602.2;Parent=Thaps12602;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1640406 1640662 . - 0 ID=Thaps12602;Parent=Thaps12602;rank=1 chr3 . exon 1640406 1640662 . - . ID=Thaps12602.1;Parent=Thaps12602;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1641930 1642520 . - . ID=Thaps3718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK5];external_name=Thaps3718;logic_name=jgi_thaps3 chr3 ensembl transcript 1641930 1642520 . - . ID=Thaps3718;Parent=Thaps3718;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1641930 1642520 . - 0 ID=Thaps3718;Parent=Thaps3718;rank=1 chr3 . exon 1641930 1642520 . - . ID=Thaps3718.1;Parent=Thaps3718;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1642878 1646910 . + . ID=Thaps3719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK6];external_name=Thaps3719;logic_name=jgi_thaps3 chr3 ensembl transcript 1642878 1646910 . + . ID=Thaps3719;Parent=Thaps3719;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1642878 1645763 . + 0 ID=Thaps3719;Parent=Thaps3719;rank=1 chr3 . exon 1642878 1645763 . + . ID=Thaps3719.1;Parent=Thaps3719;constitutive=1;rank=1 chr3 . CDS 1645860 1646012 . + 0 ID=Thaps3719;Parent=Thaps3719;rank=2 chr3 . CDS 1646086 1646910 . + 0 ID=Thaps3719;Parent=Thaps3719;rank=3 chr3 ensembl protein_coding_gene 1649249 1654922 . + . ID=Thaps21891;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK8];external_name=Thaps21891;logic_name=jgi_thaps3 chr3 ensembl transcript 1649249 1654922 . + . ID=Thaps21891;Parent=Thaps21891;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1649249 1652731 . + 0 ID=Thaps21891;Parent=Thaps21891;rank=1 chr3 . exon 1649249 1652731 . + . ID=Thaps21891.1;Parent=Thaps21891;constitutive=1;rank=1 chr3 . CDS 1652806 1653204 . + 0 ID=Thaps21891;Parent=Thaps21891;rank=2 chr3 . exon 1652806 1653204 . + . ID=Thaps21891.2;Parent=Thaps21891;constitutive=1;rank=2 chr3 . CDS 1653294 1654922 . + 0 ID=Thaps21891;Parent=Thaps21891;rank=3 chr3 . exon 1653294 1654922 . + . ID=Thaps21891.3;Parent=Thaps21891;constitutive=1;rank=3 chr3 . exon 1645860 1646012 . + . ID=Thaps3719.2;Parent=Thaps3719;constitutive=1;rank=2 chr3 . exon 1646086 1646910 . + . ID=Thaps3719.3;Parent=Thaps3719;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1647695 1648816 . - . ID=Thaps40010;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK7];external_name=Thaps40010;logic_name=jgi_thaps3 chr3 ensembl transcript 1647695 1648816 . - . ID=Thaps40010;Parent=Thaps40010;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1647695 1648055 . - 0 ID=Thaps40010;Parent=Thaps40010;rank=3 chr3 . exon 1647695 1648055 . - . ID=Thaps40010.3;Parent=Thaps40010;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1648134 1648296 . - 0 ID=Thaps40010;Parent=Thaps40010;rank=2 chr3 . exon 1648134 1648296 . - . ID=Thaps40010.2;Parent=Thaps40010;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1648399 1648816 . - 0 ID=Thaps40010;Parent=Thaps40010;rank=1 chr3 . exon 1648399 1648816 . - . ID=Thaps40010.1;Parent=Thaps40010;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1655225 1657044 . + . ID=Thaps21892;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYK9];external_name=Thaps21892;logic_name=jgi_thaps3 chr3 ensembl transcript 1655225 1657044 . + . ID=Thaps21892;Parent=Thaps21892;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1655225 1655925 . + 0 ID=Thaps21892;Parent=Thaps21892;rank=1 chr3 . exon 1655225 1655925 . + . ID=Thaps21892.1;Parent=Thaps21892;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1656048 1657044 . + 0 ID=Thaps21892;Parent=Thaps21892;rank=2 chr3 . exon 1656048 1657044 . + . ID=Thaps21892.2;Parent=Thaps21892;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1657224 1660363 . - . ID=Thaps21893;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL0];external_name=Thaps21893;logic_name=jgi_thaps3 chr3 ensembl transcript 1657224 1660363 . - . ID=Thaps21893;Parent=Thaps21893;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1657224 1657949 . - 0 ID=Thaps21893;Parent=Thaps21893;rank=4 chr3 . exon 1657224 1657949 . - . ID=Thaps21893.4;Parent=Thaps21893;constitutive=1;rank=4 chr3 . CDS 1658030 1658395 . - 0 ID=Thaps21893;Parent=Thaps21893;rank=3 chr3 . exon 1658030 1658395 . - . ID=Thaps21893.3;Parent=Thaps21893;constitutive=1;rank=3 chr3 . CDS 1658463 1658634 . - 0 ID=Thaps21893;Parent=Thaps21893;rank=2 chr3 . exon 1658463 1658634 . - . ID=Thaps21893.2;Parent=Thaps21893;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1658709 1660363 . - 0 ID=Thaps21893;Parent=Thaps21893;rank=1 chr3 . exon 1658709 1660363 . - . ID=Thaps21893.1;Parent=Thaps21893;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1662860 1663549 . + . ID=Thaps268526;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL1];external_name=Thaps268526;logic_name=jgi_thaps3 chr3 ensembl transcript 1662860 1663549 . + . ID=Thaps268526;Parent=Thaps268526;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1662860 1663549 . + 0 ID=Thaps268526;Parent=Thaps268526;rank=1 chr3 . exon 1662860 1663549 . + . ID=Thaps268526.1;Parent=Thaps268526;constitutive=1;rank=1 chr3 . repeat_region 1665218 1665259 . ? . description=trf chr3 . repeat_region 1665786 1665819 . ? . description=dust chr3 . repeat_region 1667919 1667966 . ? . description=trf chr3 ensembl protein_coding_gene 1670593 1672017 . + . ID=Thaps14315;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL4];external_name=Thaps14315;logic_name=jgi_thaps3 chr3 ensembl transcript 1670593 1672017 . + . ID=Thaps14315;Parent=Thaps14315;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1670593 1670840 . + 0 ID=Thaps14315;Parent=Thaps14315;rank=1 chr3 . exon 1670593 1670840 . + . ID=Thaps14315.1;Parent=Thaps14315;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1670907 1671744 . + 0 ID=Thaps14315;Parent=Thaps14315;rank=2 chr3 . exon 1670907 1671744 . + . ID=Thaps14315.2;Parent=Thaps14315;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1671880 1672017 . + 0 ID=Thaps14315;Parent=Thaps14315;rank=3 chr3 . exon 1671880 1672017 . + . ID=Thaps14315.3;Parent=Thaps14315;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1668037 1668459 . - . ID=Thaps21895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL3];external_name=Thaps21895;logic_name=jgi_thaps3 chr3 ensembl transcript 1668037 1668459 . - . ID=Thaps21895;Parent=Thaps21895;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1668037 1668459 . - 0 ID=Thaps21895;Parent=Thaps21895;rank=1 chr3 . exon 1668037 1668459 . - . ID=Thaps21895.1;Parent=Thaps21895;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1672523 1673809 . - . ID=Thaps21896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL5];external_name=Thaps21896;logic_name=jgi_thaps3 chr3 ensembl transcript 1672523 1673809 . - . ID=Thaps21896;Parent=Thaps21896;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1672523 1673809 . - 0 ID=Thaps21896;Parent=Thaps21896;rank=1 chr3 . exon 1672523 1673809 . - . ID=Thaps21896.1;Parent=Thaps21896;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1666182 1667126 . + . ID=Thaps3725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL2];external_name=Thaps3725;logic_name=jgi_thaps3 chr3 ensembl transcript 1666182 1667126 . + . ID=Thaps3725;Parent=Thaps3725;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1666182 1667126 . + 0 ID=Thaps3725;Parent=Thaps3725;rank=1 chr3 . exon 1666182 1667126 . + . ID=Thaps3725.1;Parent=Thaps3725;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1679126 1679590 . - . ID=Thaps21897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL9];external_name=Thaps21897;logic_name=jgi_thaps3 chr3 ensembl transcript 1679126 1679590 . - . ID=Thaps21897;Parent=Thaps21897;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1679126 1679166 . - 0 ID=Thaps21897;Parent=Thaps21897;rank=2 chr3 . exon 1679126 1679166 . - . ID=Thaps21897.2;Parent=Thaps21897;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1679260 1679590 . - 0 ID=Thaps21897;Parent=Thaps21897;rank=1 chr3 . exon 1679260 1679590 . - . ID=Thaps21897.1;Parent=Thaps21897;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1680015 1680337 . - . ID=Thaps261882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYM0];external_name=Thaps261882;logic_name=jgi_thaps3 chr3 ensembl transcript 1680015 1680337 . - . ID=Thaps261882;Parent=Thaps261882;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1680015 1680337 . - 0 ID=Thaps261882;Parent=Thaps261882;rank=1 chr3 . exon 1680015 1680337 . - . ID=Thaps261882.1;Parent=Thaps261882;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1674102 1675178 . + . ID=Thaps32779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL6];external_name=Thaps32779;logic_name=jgi_thaps3 chr3 ensembl transcript 1674102 1675178 . + . ID=Thaps32779;Parent=Thaps32779;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1674102 1674264 . + 0 ID=Thaps32779;Parent=Thaps32779;rank=1 chr3 . exon 1674102 1674264 . + . ID=Thaps32779.1;Parent=Thaps32779;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1674367 1674797 . + 0 ID=Thaps32779;Parent=Thaps32779;rank=2 chr3 . exon 1674367 1674797 . + . ID=Thaps32779.2;Parent=Thaps32779;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1674975 1675178 . + 0 ID=Thaps32779;Parent=Thaps32779;rank=3 chr3 . exon 1674975 1675178 . + . ID=Thaps32779.3;Parent=Thaps32779;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1676064 1676829 . - . ID=Thaps3730;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL7];external_name=Thaps3730;logic_name=jgi_thaps3 chr3 ensembl transcript 1676064 1676829 . - . ID=Thaps3730;Parent=Thaps3730;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1676064 1676427 . - 0 ID=Thaps3730;Parent=Thaps3730;rank=2 chr3 . exon 1676064 1676427 . - . ID=Thaps3730.2;Parent=Thaps3730;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1676507 1676829 . - 0 ID=Thaps3730;Parent=Thaps3730;rank=1 chr3 . exon 1676507 1676829 . - . ID=Thaps3730.1;Parent=Thaps3730;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1677219 1679054 . + . ID=Thaps3731;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYL8];external_name=Thaps3731;logic_name=jgi_thaps3 chr3 ensembl transcript 1677219 1679054 . + . ID=Thaps3731;Parent=Thaps3731;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1677219 1679054 . + 0 ID=Thaps3731;Parent=Thaps3731;rank=1 chr3 . exon 1677219 1679054 . + . ID=Thaps3731.1;Parent=Thaps3731;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1680835 1682463 . + . ID=Thaps3734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYM1];external_name=Thaps3734;logic_name=jgi_thaps3 chr3 ensembl transcript 1680835 1682463 . + . ID=Thaps3734;Parent=Thaps3734;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1680835 1681432 . + 0 ID=Thaps3734;Parent=Thaps3734;rank=1 chr3 . exon 1680835 1681432 . + . ID=Thaps3734.1;Parent=Thaps3734;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1681697 1682463 . + 0 ID=Thaps3734;Parent=Thaps3734;rank=2 chr3 . exon 1681697 1682463 . + . ID=Thaps3734.2;Parent=Thaps3734;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . repeat_region 1687799 1687806 . ? . description=dust chr3 ensembl protein_coding_gene 1685287 1686072 . + . ID=Thaps21898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYM3];external_name=Thaps21898;logic_name=jgi_thaps3 chr3 ensembl transcript 1685287 1686072 . + . ID=Thaps21898;Parent=Thaps21898;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1685287 1685397 . + 0 ID=Thaps21898;Parent=Thaps21898;rank=1 chr3 . exon 1685287 1685397 . + . ID=Thaps21898.1;Parent=Thaps21898;constitutive=1;rank=1 chr3 . CDS 1685530 1685652 . + 0 ID=Thaps21898;Parent=Thaps21898;rank=2 chr3 . exon 1685530 1685652 . + . ID=Thaps21898.2;Parent=Thaps21898;constitutive=1;rank=2 chr3 . CDS 1685798 1685872 . + 0 ID=Thaps21898;Parent=Thaps21898;rank=3 chr3 . exon 1685798 1685872 . + . ID=Thaps21898.3;Parent=Thaps21898;constitutive=1;rank=3 chr3 . CDS 1685971 1686072 . + 0 ID=Thaps21898;Parent=Thaps21898;rank=4 chr3 . exon 1685971 1686072 . + . ID=Thaps21898.4;Parent=Thaps21898;constitutive=1;rank=4 chr3 ensembl protein_coding_gene 1688885 1690690 . + . ID=Thaps21900;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYM5];external_name=Thaps21900;logic_name=jgi_thaps3 chr3 ensembl transcript 1688885 1690690 . + . ID=Thaps21900;Parent=Thaps21900;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1688885 1690690 . + 0 ID=Thaps21900;Parent=Thaps21900;rank=1 chr3 . exon 1688885 1690690 . + . ID=Thaps21900.1;Parent=Thaps21900;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1690938 1693496 . + . ID=Thaps21901;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYM6];external_name=Thaps21901;logic_name=jgi_thaps3 chr3 ensembl transcript 1690938 1693496 . + . ID=Thaps21901;Parent=Thaps21901;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1690938 1691204 . + 0 ID=Thaps21901;Parent=Thaps21901;rank=1 chr3 . exon 1690938 1691204 . + . ID=Thaps21901.1;Parent=Thaps21901;constitutive=1;rank=1 chr3 . CDS 1691345 1692340 . + 0 ID=Thaps21901;Parent=Thaps21901;rank=2 chr3 . exon 1691345 1692340 . + . ID=Thaps21901.2;Parent=Thaps21901;constitutive=1;rank=2 chr3 . CDS 1692439 1692650 . + 0 ID=Thaps21901;Parent=Thaps21901;rank=3 chr3 . exon 1692439 1692650 . + . ID=Thaps21901.3;Parent=Thaps21901;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1692737 1693496 . + 0 ID=Thaps21901;Parent=Thaps21901;rank=4 chr3 . exon 1692737 1693496 . + . ID=Thaps21901.4;Parent=Thaps21901;constitutive=1;ensembl_end_phase=1;rank=4 chr3 ensembl protein_coding_gene 1684020 1684633 . - . ID=Thaps261883;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYM2];external_name=Thaps261883;logic_name=jgi_thaps3 chr3 ensembl transcript 1684020 1684633 . - . ID=Thaps261883;Parent=Thaps261883;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1684020 1684633 . - 0 ID=Thaps261883;Parent=Thaps261883;rank=1 chr3 . exon 1684020 1684633 . - . ID=Thaps261883.1;Parent=Thaps261883;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1686901 1687269 . - . ID=Thaps33242;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYM4];external_name=Thaps33242;logic_name=jgi_thaps3 chr3 ensembl transcript 1686901 1687269 . - . ID=Thaps33242;Parent=Thaps33242;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1686901 1687269 . - 0 ID=Thaps33242;Parent=Thaps33242;rank=1 chr3 . exon 1686901 1687269 . - . ID=Thaps33242.1;Parent=Thaps33242;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1694421 1695195 . - . ID=Thaps261885;biotype=protein_coding;description=Rna-binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYM7];external_name=Thaps261885;logic_name=jgi_thaps3 chr3 ensembl transcript 1694421 1695195 . - . ID=Thaps261885;Parent=Thaps261885;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1694421 1694676 . - 0 ID=Thaps261885;Parent=Thaps261885;rank=4 chr3 . exon 1694421 1694676 . - . ID=Thaps261885.4;Parent=Thaps261885;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1694750 1694942 . - 0 ID=Thaps261885;Parent=Thaps261885;rank=3 chr3 . exon 1694750 1694942 . - . ID=Thaps261885.3;Parent=Thaps261885;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1695034 1695060 . - 0 ID=Thaps261885;Parent=Thaps261885;rank=2 chr3 . exon 1695034 1695060 . - . ID=Thaps261885.2;Parent=Thaps261885;constitutive=1;rank=2 chr3 . CDS 1695076 1695195 . - 0 ID=Thaps261885;Parent=Thaps261885;rank=1 chr3 . exon 1695076 1695195 . - . ID=Thaps261885.1;Parent=Thaps261885;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1700326 1700520 . - . ID=Thaps33035;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYN0];external_name=Thaps33035;logic_name=jgi_thaps3 chr3 ensembl transcript 1700326 1700520 . - . ID=Thaps33035;Parent=Thaps33035;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1700326 1700520 . - 0 ID=Thaps33035;Parent=Thaps33035;rank=1 chr3 . exon 1700326 1700520 . - . ID=Thaps33035.1;Parent=Thaps33035;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1696534 1698474 . - . ID=Thaps33046;biotype=protein_coding;description=Phenylalanyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BYM8];external_name=Thaps33046;logic_name=jgi_thaps3 chr3 ensembl transcript 1696534 1698474 . - . ID=Thaps33046;Parent=Thaps33046;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1696534 1696722 . - 0 ID=Thaps33046;Parent=Thaps33046;rank=2 chr3 . exon 1696534 1696722 . - . ID=Thaps33046.2;Parent=Thaps33046;constitutive=1;rank=2 chr3 . CDS 1696801 1698474 . - 0 ID=Thaps33046;Parent=Thaps33046;rank=1 chr3 . exon 1696801 1698474 . - . ID=Thaps33046.1;Parent=Thaps33046;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1698731 1699691 . + . ID=Thaps3741;biotype=protein_coding;description=Probable microsomal very long chain fatty acid elongase [Source:UniProtKB/TrEMBL%3BAcc:B8BYM9];external_name=ELO1;logic_name=jgi_thaps3 chr3 ensembl transcript 1698731 1699691 . + . ID=Thaps3741;Parent=Thaps3741;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1698731 1698820 . + 0 ID=Thaps3741;Parent=Thaps3741;rank=1 chr3 . exon 1698731 1698820 . + . ID=Thaps3741.1;Parent=Thaps3741;constitutive=1;rank=1 chr3 . CDS 1698963 1699691 . + 0 ID=Thaps3741;Parent=Thaps3741;rank=2 chr3 . exon 1698963 1699691 . + . ID=Thaps3741.2;Parent=Thaps3741;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 1701079 1705272 . + . ID=Thaps3744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYN1];external_name=Thaps3744;logic_name=jgi_thaps3 chr3 ensembl transcript 1701079 1705272 . + . ID=Thaps3744;Parent=Thaps3744;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1701079 1705272 . + 0 ID=Thaps3744;Parent=Thaps3744;rank=1 chr3 . exon 1701079 1705272 . + . ID=Thaps3744.1;Parent=Thaps3744;constitutive=1;rank=1 chr3 . repeat_region 1705466 1705882 . ? . description=trf chr3 . repeat_region 1707744 1707752 . ? . description=dust chr3 . repeat_region 1707857 1707866 . ? . description=dust chr3 ensembl protein_coding_gene 1709002 1711939 . + . ID=Thaps12729;biotype=protein_coding;description=Trehalose-6-phosphate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BYN3];external_name=Thaps12729;logic_name=jgi_thaps3 chr3 ensembl transcript 1709002 1711939 . + . ID=Thaps12729;Parent=Thaps12729;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1709002 1709142 . + 0 ID=Thaps12729;Parent=Thaps12729;rank=1 chr3 . exon 1709002 1709142 . + . ID=Thaps12729.1;Parent=Thaps12729;constitutive=1;rank=1 chr3 . CDS 1709194 1709291 . + 0 ID=Thaps12729;Parent=Thaps12729;rank=2 chr3 . exon 1709194 1709291 . + . ID=Thaps12729.2;Parent=Thaps12729;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1709384 1709429 . + 0 ID=Thaps12729;Parent=Thaps12729;rank=3 chr3 . exon 1709384 1709429 . + . ID=Thaps12729.3;Parent=Thaps12729;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1709565 1710428 . + 0 ID=Thaps12729;Parent=Thaps12729;rank=4 chr3 . exon 1709565 1710428 . + . ID=Thaps12729.4;Parent=Thaps12729;constitutive=1;rank=4 chr3 . CDS 1710514 1710991 . + 0 ID=Thaps12729;Parent=Thaps12729;rank=5 chr3 . exon 1710514 1710991 . + . ID=Thaps12729.5;Parent=Thaps12729;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1711119 1711699 . + 0 ID=Thaps12729;Parent=Thaps12729;rank=6 chr3 . exon 1711119 1711699 . + . ID=Thaps12729.6;Parent=Thaps12729;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 1711793 1711939 . + 0 ID=Thaps12729;Parent=Thaps12729;rank=7 chr3 . exon 1711793 1711939 . + . ID=Thaps12729.7;Parent=Thaps12729;constitutive=1;rank=7 chr3 ensembl protein_coding_gene 1707375 1707569 . - . ID=Thaps20189;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYN2];external_name=Thaps20189;logic_name=jgi_thaps3 chr3 ensembl transcript 1707375 1707569 . - . ID=Thaps20189;Parent=Thaps20189;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1707375 1707569 . - 0 ID=Thaps20189;Parent=Thaps20189;rank=1 chr3 . exon 1707375 1707569 . - . ID=Thaps20189.1;Parent=Thaps20189;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1712453 1713098 . - . ID=Thaps21904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYN4];external_name=Thaps21904;logic_name=jgi_thaps3 chr3 ensembl transcript 1712453 1713098 . - . ID=Thaps21904;Parent=Thaps21904;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1712453 1713033 . - 0 ID=Thaps21904;Parent=Thaps21904;rank=2 chr3 . exon 1712453 1713033 . - . ID=Thaps21904.2;Parent=Thaps21904;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1713062 1713098 . - 0 ID=Thaps21904;Parent=Thaps21904;rank=1 chr3 . exon 1713062 1713098 . - . ID=Thaps21904.1;Parent=Thaps21904;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1714880 1716015 . - . ID=Thaps21905;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYN6];external_name=Thaps21905;logic_name=jgi_thaps3 chr3 ensembl transcript 1714880 1716015 . - . ID=Thaps21905;Parent=Thaps21905;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1714880 1715281 . - 0 ID=Thaps21905;Parent=Thaps21905;rank=3 chr3 . exon 1714880 1715281 . - . ID=Thaps21905.3;Parent=Thaps21905;constitutive=1;rank=3 chr3 . CDS 1715376 1715582 . - 0 ID=Thaps21905;Parent=Thaps21905;rank=2 chr3 . exon 1715376 1715582 . - . ID=Thaps21905.2;Parent=Thaps21905;constitutive=1;rank=2 chr3 . CDS 1715665 1716015 . - 0 ID=Thaps21905;Parent=Thaps21905;rank=1 chr3 . exon 1715665 1716015 . - . ID=Thaps21905.1;Parent=Thaps21905;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1713509 1714635 . + . ID=Thaps3748;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYN5];external_name=Thaps3748;logic_name=jgi_thaps3 chr3 ensembl transcript 1713509 1714635 . + . ID=Thaps3748;Parent=Thaps3748;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1713509 1713646 . + 0 ID=Thaps3748;Parent=Thaps3748;rank=1 chr3 . exon 1713509 1713646 . + . ID=Thaps3748.1;Parent=Thaps3748;constitutive=1;rank=1 chr3 . CDS 1713868 1714635 . + 0 ID=Thaps3748;Parent=Thaps3748;rank=2 chr3 . exon 1713868 1714635 . + . ID=Thaps3748.2;Parent=Thaps3748;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 1717255 1720383 . - . ID=Thaps3750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYN7];external_name=Thaps3750;logic_name=jgi_thaps3 chr3 ensembl transcript 1717255 1720383 . - . ID=Thaps3750;Parent=Thaps3750;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1717255 1717481 . - 0 ID=Thaps3750;Parent=Thaps3750;rank=2 chr3 . exon 1717255 1717481 . - . ID=Thaps3750.2;Parent=Thaps3750;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1717587 1720383 . - 0 ID=Thaps3750;Parent=Thaps3750;rank=1 chr3 . exon 1717587 1720383 . - . ID=Thaps3750.1;Parent=Thaps3750;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1721693 1724373 . + . ID=Thaps3751;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYN8];external_name=Thaps3751;logic_name=jgi_thaps3 chr3 ensembl transcript 1721693 1724373 . + . ID=Thaps3751;Parent=Thaps3751;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1721693 1722639 . + 0 ID=Thaps3751;Parent=Thaps3751;rank=1 chr3 . exon 1721693 1722639 . + . ID=Thaps3751.1;Parent=Thaps3751;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1722759 1724373 . + 0 ID=Thaps3751;Parent=Thaps3751;rank=2 chr3 . exon 1722759 1724373 . + . ID=Thaps3751.2;Parent=Thaps3751;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . repeat_region 1729149 1729190 . ? . description=trf chr3 ensembl protein_coding_gene 1732207 1734968 . + . ID=Thaps21908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYP4];external_name=Thaps21908;logic_name=jgi_thaps3 chr3 ensembl transcript 1732207 1734968 . + . ID=Thaps21908;Parent=Thaps21908;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1732207 1733725 . + 0 ID=Thaps21908;Parent=Thaps21908;rank=1 chr3 . exon 1732207 1733725 . + . ID=Thaps21908.1;Parent=Thaps21908;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1733844 1733960 . + 0 ID=Thaps21908;Parent=Thaps21908;rank=2 chr3 . CDS 1734103 1734968 . + 0 ID=Thaps21908;Parent=Thaps21908;rank=3 chr3 ensembl protein_coding_gene 1724761 1725637 . - . ID=Thaps3752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYN9];external_name=Thaps3752;logic_name=jgi_thaps3 chr3 ensembl transcript 1724761 1725637 . - . ID=Thaps3752;Parent=Thaps3752;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1724761 1725451 . - 0 ID=Thaps3752;Parent=Thaps3752;rank=2 chr3 . exon 1724761 1725451 . - . ID=Thaps3752.2;Parent=Thaps3752;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1725561 1725637 . - 0 ID=Thaps3752;Parent=Thaps3752;rank=1 chr3 . exon 1725561 1725637 . - . ID=Thaps3752.1;Parent=Thaps3752;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1727793 1728209 . - . ID=Thaps3754;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYP1];external_name=Thaps3754;logic_name=jgi_thaps3 chr3 ensembl transcript 1727793 1728209 . - . ID=Thaps3754;Parent=Thaps3754;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1727793 1728209 . - 0 ID=Thaps3754;Parent=Thaps3754;rank=1 chr3 . exon 1727793 1728209 . - . ID=Thaps3754.1;Parent=Thaps3754;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1729166 1730257 . + . ID=Thaps3755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYP2];external_name=Thaps3755;logic_name=jgi_thaps3 chr3 ensembl transcript 1729166 1730257 . + . ID=Thaps3755;Parent=Thaps3755;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1729166 1730257 . + 0 ID=Thaps3755;Parent=Thaps3755;rank=1 chr3 . exon 1729166 1730257 . + . ID=Thaps3755.1;Parent=Thaps3755;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1730427 1731931 . - . ID=Thaps3756;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYP3];external_name=Thaps3756;logic_name=jgi_thaps3 chr3 ensembl transcript 1730427 1731931 . - . ID=Thaps3756;Parent=Thaps3756;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1730427 1730475 . - 0 ID=Thaps3756;Parent=Thaps3756;rank=2 chr3 . exon 1730427 1730475 . - . ID=Thaps3756.2;Parent=Thaps3756;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1730508 1731931 . - 0 ID=Thaps3756;Parent=Thaps3756;rank=1 chr3 . exon 1730508 1731931 . - . ID=Thaps3756.1;Parent=Thaps3756;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1726337 1727564 . + . ID=Thaps40021;biotype=protein_coding;description=Aldo-keto oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8BYP0];external_name=Thaps40021;logic_name=jgi_thaps3 chr3 ensembl transcript 1726337 1727564 . + . ID=Thaps40021;Parent=Thaps40021;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1726337 1726534 . + 0 ID=Thaps40021;Parent=Thaps40021;rank=1 chr3 . exon 1726337 1726534 . + . ID=Thaps40021.1;Parent=Thaps40021;constitutive=1;rank=1 chr3 . CDS 1726623 1726812 . + 0 ID=Thaps40021;Parent=Thaps40021;rank=2 chr3 . exon 1726623 1726812 . + . ID=Thaps40021.2;Parent=Thaps40021;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1726897 1726962 . + 0 ID=Thaps40021;Parent=Thaps40021;rank=3 chr3 . exon 1726897 1726962 . + . ID=Thaps40021.3;Parent=Thaps40021;constitutive=1;rank=3 chr3 . CDS 1727044 1727564 . + 0 ID=Thaps40021;Parent=Thaps40021;rank=4 chr3 . exon 1727044 1727564 . + . ID=Thaps40021.4;Parent=Thaps40021;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . exon 1733844 1733960 . + . ID=Thaps21908.2;Parent=Thaps21908;constitutive=1;rank=2 chr3 . exon 1734103 1734968 . + . ID=Thaps21908.3;Parent=Thaps21908;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1735100 1736924 . - . ID=Thaps21909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYP5];external_name=Thaps21909;logic_name=jgi_thaps3 chr3 ensembl transcript 1735100 1736924 . - . ID=Thaps21909;Parent=Thaps21909;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1735100 1735744 . - 0 ID=Thaps21909;Parent=Thaps21909;rank=3 chr3 . exon 1735100 1735744 . - . ID=Thaps21909.3;Parent=Thaps21909;constitutive=1;rank=3 chr3 . CDS 1735826 1736659 . - 0 ID=Thaps21909;Parent=Thaps21909;rank=2 chr3 . exon 1735826 1736659 . - . ID=Thaps21909.2;Parent=Thaps21909;constitutive=1;rank=2 chr3 . CDS 1736835 1736924 . - 0 ID=Thaps21909;Parent=Thaps21909;rank=1 chr3 . exon 1736835 1736924 . - . ID=Thaps21909.1;Parent=Thaps21909;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1737196 1738182 . + . ID=Thaps21910;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYP6];external_name=Thaps21910;logic_name=jgi_thaps3 chr3 ensembl transcript 1737196 1738182 . + . ID=Thaps21910;Parent=Thaps21910;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1737196 1738182 . + 0 ID=Thaps21910;Parent=Thaps21910;rank=1 chr3 . exon 1737196 1738182 . + . ID=Thaps21910.1;Parent=Thaps21910;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1738613 1739935 . + . ID=Thaps21911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYP7];external_name=Thaps21911;logic_name=jgi_thaps3 chr3 ensembl transcript 1738613 1739935 . + . ID=Thaps21911;Parent=Thaps21911;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1738613 1739935 . + 0 ID=Thaps21911;Parent=Thaps21911;rank=1 chr3 . exon 1738613 1739935 . + . ID=Thaps21911.1;Parent=Thaps21911;constitutive=1;rank=1 chr3 ensembl gene 1742226 1744081 . + . ID=Thaps261893;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 1742226 1744081 . + . ID=Thaps261893;Parent=Thaps261893;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 1742226 1742283 . + . ID=Thaps261893.1;Parent=Thaps261893;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . exon 1742409 1742494 . + . ID=Thaps261893.2;Parent=Thaps261893;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 1742582 1742917 . + . ID=Thaps261893.3;Parent=Thaps261893;constitutive=1;rank=3 chr3 . exon 1742942 1743734 . + . ID=Thaps261893.4;Parent=Thaps261893;constitutive=1;ensembl_end_phase=1;rank=4 chr3 ensembl protein_coding_gene 1740202 1740759 . - . ID=Thaps33209;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYP8];external_name=Thaps33209;logic_name=jgi_thaps3 chr3 ensembl transcript 1740202 1740759 . - . ID=Thaps33209;Parent=Thaps33209;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1740202 1740759 . - 0 ID=Thaps33209;Parent=Thaps33209;rank=1 chr3 . exon 1740202 1740759 . - . ID=Thaps33209.1;Parent=Thaps33209;constitutive=1;rank=1 chr3 . repeat_region 1748330 1748352 . ? . description=trf chr3 . repeat_region 1748330 1748352 . ? . description=dust chr3 . repeat_region 1748550 1748593 . ? . description=trf chr3 . repeat_region 1750461 1750514 . ? . description=trf chr3 ensembl protein_coding_gene 1745528 1746502 . + . ID=Thaps21914;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ0];external_name=Thaps21914;logic_name=jgi_thaps3 chr3 ensembl transcript 1745528 1746502 . + . ID=Thaps21914;Parent=Thaps21914;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1745528 1746502 . + 0 ID=Thaps21914;Parent=Thaps21914;rank=1 chr3 . exon 1745528 1746502 . + . ID=Thaps21914.1;Parent=Thaps21914;constitutive=1;rank=1 chr3 . exon 1743771 1744081 . + . ID=Thaps261893.5;Parent=Thaps261893;constitutive=1;ensembl_end_phase=2;rank=5 chr3 ensembl protein_coding_gene 1748702 1749312 . - . ID=Thaps261894;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ2];external_name=MYB25;logic_name=jgi_thaps3 chr3 ensembl transcript 1748702 1749312 . - . ID=Thaps261894;Parent=Thaps261894;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1748702 1749312 . - 0 ID=Thaps261894;Parent=Thaps261894;rank=1 chr3 . exon 1748702 1749312 . - . ID=Thaps261894.1;Parent=Thaps261894;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1751264 1751836 . - . ID=Thaps33092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ3];external_name=Thaps33092;logic_name=jgi_thaps3 chr3 ensembl transcript 1751264 1751836 . - . ID=Thaps33092;Parent=Thaps33092;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1751264 1751836 . - 0 ID=Thaps33092;Parent=Thaps33092;rank=1 chr3 . exon 1751264 1751836 . - . ID=Thaps33092.1;Parent=Thaps33092;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1744137 1745189 . - . ID=Thaps3763;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYP9];external_name=Thaps3763;logic_name=jgi_thaps3 chr3 ensembl transcript 1744137 1745189 . - . ID=Thaps3763;Parent=Thaps3763;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1744137 1744141 . - 0 ID=Thaps3763;Parent=Thaps3763;rank=3 chr3 . exon 1744137 1744141 . - . ID=Thaps3763.3;Parent=Thaps3763;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1744211 1744780 . - 0 ID=Thaps3763;Parent=Thaps3763;rank=2 chr3 . exon 1744211 1744780 . - . ID=Thaps3763.2;Parent=Thaps3763;constitutive=1;rank=2 chr3 . CDS 1744883 1745189 . - 0 ID=Thaps3763;Parent=Thaps3763;rank=1 chr3 . exon 1744883 1745189 . - . ID=Thaps3763.1;Parent=Thaps3763;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1747611 1748522 . + . ID=Thaps3765;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ1];external_name=Thaps3765;logic_name=jgi_thaps3 chr3 ensembl transcript 1747611 1748522 . + . ID=Thaps3765;Parent=Thaps3765;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1747611 1748522 . + 0 ID=Thaps3765;Parent=Thaps3765;rank=1 chr3 . exon 1747611 1748522 . + . ID=Thaps3765.1;Parent=Thaps3765;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1755139 1757366 . - . ID=Thaps21916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ5];external_name=Thaps21916;logic_name=jgi_thaps3 chr3 ensembl transcript 1755139 1757366 . - . ID=Thaps21916;Parent=Thaps21916;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1755139 1756698 . - 0 ID=Thaps21916;Parent=Thaps21916;rank=3 chr3 . exon 1755139 1756698 . - . ID=Thaps21916.3;Parent=Thaps21916;constitutive=1;rank=3 chr3 . CDS 1757001 1757109 . - 0 ID=Thaps21916;Parent=Thaps21916;rank=2 chr3 . exon 1757001 1757109 . - . ID=Thaps21916.2;Parent=Thaps21916;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1757365 1757366 . - 0 ID=Thaps21916;Parent=Thaps21916;rank=1 chr3 . exon 1757365 1757366 . - . ID=Thaps21916.1;Parent=Thaps21916;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1762646 1763454 . - . ID=Thaps261895;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ7];external_name=Thaps261895;logic_name=jgi_thaps3 chr3 ensembl transcript 1762646 1763454 . - . ID=Thaps261895;Parent=Thaps261895;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1762646 1763454 . - 0 ID=Thaps261895;Parent=Thaps261895;rank=1 chr3 . exon 1762646 1763454 . - . ID=Thaps261895.1;Parent=Thaps261895;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1754419 1754940 . + . ID=Thaps3768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ4];external_name=Thaps3768;logic_name=jgi_thaps3 chr3 ensembl transcript 1754419 1754940 . + . ID=Thaps3768;Parent=Thaps3768;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1754419 1754940 . + 0 ID=Thaps3768;Parent=Thaps3768;rank=1 chr3 . exon 1754419 1754940 . + . ID=Thaps3768.1;Parent=Thaps3768;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1757795 1759164 . + . ID=Thaps3770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ6];external_name=Thaps3770;logic_name=jgi_thaps3 chr3 ensembl transcript 1757795 1759164 . + . ID=Thaps3770;Parent=Thaps3770;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1757795 1758570 . + 0 ID=Thaps3770;Parent=Thaps3770;rank=1 chr3 . exon 1757795 1758570 . + . ID=Thaps3770.1;Parent=Thaps3770;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1758651 1759164 . + 0 ID=Thaps3770;Parent=Thaps3770;rank=2 chr3 . exon 1758651 1759164 . + . ID=Thaps3770.2;Parent=Thaps3770;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1764829 1767464 . - . ID=Thaps21918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ9];external_name=Thaps21918;logic_name=jgi_thaps3 chr3 ensembl transcript 1764829 1767464 . - . ID=Thaps21918;Parent=Thaps21918;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1764829 1765199 . - 0 ID=Thaps21918;Parent=Thaps21918;rank=6 chr3 . exon 1764829 1765199 . - . ID=Thaps21918.6;Parent=Thaps21918;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 1765325 1765346 . - 0 ID=Thaps21918;Parent=Thaps21918;rank=5 chr3 . exon 1765325 1765346 . - . ID=Thaps21918.5;Parent=Thaps21918;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1765557 1765745 . - 0 ID=Thaps21918;Parent=Thaps21918;rank=4 chr3 . exon 1765557 1765745 . - . ID=Thaps21918.4;Parent=Thaps21918;constitutive=1;rank=4 chr3 . CDS 1765830 1765939 . - 0 ID=Thaps21918;Parent=Thaps21918;rank=3 chr3 . exon 1765830 1765939 . - . ID=Thaps21918.3;Parent=Thaps21918;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1766056 1767267 . - 0 ID=Thaps21918;Parent=Thaps21918;rank=2 chr3 . exon 1766056 1767267 . - . ID=Thaps21918.2;Parent=Thaps21918;constitutive=1;rank=2 chr3 . CDS 1767389 1767464 . - 0 ID=Thaps21918;Parent=Thaps21918;rank=1 chr3 . exon 1767389 1767464 . - . ID=Thaps21918.1;Parent=Thaps21918;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1764068 1764355 . - . ID=Thaps268533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYQ8];external_name=Thaps268533;logic_name=jgi_thaps3 chr3 ensembl transcript 1764068 1764355 . - . ID=Thaps268533;Parent=Thaps268533;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1764068 1764355 . - 0 ID=Thaps268533;Parent=Thaps268533;rank=1 chr3 . exon 1764068 1764355 . - . ID=Thaps268533.1;Parent=Thaps268533;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1772086 1772673 . - . ID=Thaps33220;biotype=protein_coding;description=Probable peptide methionine sulfoxide reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BYR2];external_name=MSA1;logic_name=jgi_thaps3 chr3 ensembl transcript 1772086 1772673 . - . ID=Thaps33220;Parent=Thaps33220;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1772086 1772673 . - 0 ID=Thaps33220;Parent=Thaps33220;rank=1 chr3 . exon 1772086 1772673 . - . ID=Thaps33220.1;Parent=Thaps33220;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1767736 1768983 . + . ID=Thaps3773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYR0];external_name=Thaps3773;logic_name=jgi_thaps3 chr3 ensembl transcript 1767736 1768983 . + . ID=Thaps3773;Parent=Thaps3773;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1767736 1768983 . + 0 ID=Thaps3773;Parent=Thaps3773;rank=1 chr3 . exon 1767736 1768983 . + . ID=Thaps3773.1;Parent=Thaps3773;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1769684 1771829 . + . ID=Thaps40028;biotype=protein_coding;description=Arginyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BYR1];external_name=Thaps40028;logic_name=jgi_thaps3 chr3 ensembl transcript 1769684 1771829 . + . ID=Thaps40028;Parent=Thaps40028;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1769684 1770036 . + 0 ID=Thaps40028;Parent=Thaps40028;rank=1 chr3 . exon 1769684 1770036 . + . ID=Thaps40028.1;Parent=Thaps40028;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1770131 1770539 . + 0 ID=Thaps40028;Parent=Thaps40028;rank=2 chr3 . exon 1770131 1770539 . + . ID=Thaps40028.2;Parent=Thaps40028;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1770615 1770758 . + 0 ID=Thaps40028;Parent=Thaps40028;rank=3 chr3 . exon 1770615 1770758 . + . ID=Thaps40028.3;Parent=Thaps40028;constitutive=1;rank=3 chr3 . CDS 1770842 1771606 . + 0 ID=Thaps40028;Parent=Thaps40028;rank=4 chr3 . exon 1770842 1771606 . + . ID=Thaps40028.4;Parent=Thaps40028;constitutive=1;rank=4 chr3 . CDS 1771692 1771829 . + 0 ID=Thaps40028;Parent=Thaps40028;rank=5 chr3 . exon 1771692 1771829 . + . ID=Thaps40028.5;Parent=Thaps40028;constitutive=1;rank=5 chr3 . repeat_region 1773174 1773193 . ? . description=trf chr3 . repeat_region 1773395 1773432 . ? . description=trf chr3 ensembl protein_coding_gene 1780152 1780505 . - . ID=Thaps19081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYR6];external_name=Thaps19081;logic_name=jgi_thaps3 chr3 ensembl transcript 1780152 1780505 . - . ID=Thaps19081;Parent=Thaps19081;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1780152 1780505 . - 0 ID=Thaps19081;Parent=Thaps19081;rank=1 chr3 . exon 1780152 1780505 . - . ID=Thaps19081.1;Parent=Thaps19081;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1782551 1783810 . - . ID=Thaps32782;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYR8];external_name=Thaps32782;logic_name=jgi_thaps3 chr3 ensembl transcript 1782551 1783810 . - . ID=Thaps32782;Parent=Thaps32782;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1782551 1782951 . - 0 ID=Thaps32782;Parent=Thaps32782;rank=4 chr3 . exon 1782551 1782951 . - . ID=Thaps32782.4;Parent=Thaps32782;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1783105 1783281 . - 0 ID=Thaps32782;Parent=Thaps32782;rank=3 chr3 . CDS 1783429 1783590 . - 0 ID=Thaps32782;Parent=Thaps32782;rank=2 chr3 . CDS 1783633 1783810 . - 0 ID=Thaps32782;Parent=Thaps32782;rank=1 chr3 ensembl protein_coding_gene 1776306 1776731 . - . ID=Thaps32920;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYR5];external_name=Thaps32920;logic_name=jgi_thaps3 chr3 ensembl transcript 1776306 1776731 . - . ID=Thaps32920;Parent=Thaps32920;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1776306 1776731 . - 0 ID=Thaps32920;Parent=Thaps32920;rank=1 chr3 . exon 1776306 1776731 . - . ID=Thaps32920.1;Parent=Thaps32920;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1773521 1774468 . + . ID=Thaps3776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYR3];external_name=Thaps3776;logic_name=jgi_thaps3 chr3 ensembl transcript 1773521 1774468 . + . ID=Thaps3776;Parent=Thaps3776;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1773521 1774468 . + 0 ID=Thaps3776;Parent=Thaps3776;rank=1 chr3 . exon 1773521 1774468 . + . ID=Thaps3776.1;Parent=Thaps3776;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1774607 1775811 . + . ID=Thaps3777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYR4];external_name=Thaps3777;logic_name=jgi_thaps3 chr3 ensembl transcript 1774607 1775811 . + . ID=Thaps3777;Parent=Thaps3777;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1774607 1774852 . + 0 ID=Thaps3777;Parent=Thaps3777;rank=1 chr3 . exon 1774607 1774852 . + . ID=Thaps3777.1;Parent=Thaps3777;constitutive=1;rank=1 chr3 . CDS 1774944 1775219 . + 0 ID=Thaps3777;Parent=Thaps3777;rank=2 chr3 . exon 1774944 1775219 . + . ID=Thaps3777.2;Parent=Thaps3777;constitutive=1;rank=2 chr3 . CDS 1775311 1775811 . + 0 ID=Thaps3777;Parent=Thaps3777;rank=3 chr3 . exon 1775311 1775811 . + . ID=Thaps3777.3;Parent=Thaps3777;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1781208 1782398 . + . ID=Thaps3779;biotype=protein_coding;description=Probable nuceloside diphosphate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BYR7];external_name=NDK4;logic_name=jgi_thaps3 chr3 ensembl transcript 1781208 1782398 . + . ID=Thaps3779;Parent=Thaps3779;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1781208 1782398 . + 0 ID=Thaps3779;Parent=Thaps3779;rank=1 chr3 . exon 1781208 1782398 . + . ID=Thaps3779.1;Parent=Thaps3779;constitutive=1;rank=1 chr3 . repeat_region 1784026 1784779 . + . description=TE2b_TP chr3 . repeat_region 1788637 1788644 . ? . description=dust chr3 . repeat_region 1790909 1790929 . ? . description=dust chr3 ensembl protein_coding_gene 1788372 1791008 . - . ID=Thaps21922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYS0];external_name=Thaps21922;logic_name=jgi_thaps3 chr3 ensembl transcript 1788372 1791008 . - . ID=Thaps21922;Parent=Thaps21922;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1788372 1791008 . - 0 ID=Thaps21922;Parent=Thaps21922;rank=1 chr3 . exon 1788372 1791008 . - . ID=Thaps21922.1;Parent=Thaps21922;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1791515 1792663 . + . ID=Thaps21923;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYS1];external_name=Thaps21923;logic_name=jgi_thaps3 chr3 ensembl transcript 1791515 1792663 . + . ID=Thaps21923;Parent=Thaps21923;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1791515 1792663 . + 0 ID=Thaps21923;Parent=Thaps21923;rank=1 chr3 . exon 1791515 1792663 . + . ID=Thaps21923.1;Parent=Thaps21923;constitutive=1;rank=1 chr3 . exon 1783105 1783281 . - . ID=Thaps32782.3;Parent=Thaps32782;constitutive=1;rank=3 chr3 . exon 1783429 1783590 . - . ID=Thaps32782.2;Parent=Thaps32782;constitutive=1;rank=2 chr3 . exon 1783633 1783810 . - . ID=Thaps32782.1;Parent=Thaps32782;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1785458 1787769 . + . ID=Thaps3781;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYR9];external_name=Thaps3781;logic_name=jgi_thaps3 chr3 ensembl transcript 1785458 1787769 . + . ID=Thaps3781;Parent=Thaps3781;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1785458 1785652 . + 0 ID=Thaps3781;Parent=Thaps3781;rank=1 chr3 . exon 1785458 1785652 . + . ID=Thaps3781.1;Parent=Thaps3781;constitutive=1;rank=1 chr3 . CDS 1785788 1786069 . + 0 ID=Thaps3781;Parent=Thaps3781;rank=2 chr3 . exon 1785788 1786069 . + . ID=Thaps3781.2;Parent=Thaps3781;constitutive=1;rank=2 chr3 . CDS 1786150 1787559 . + 0 ID=Thaps3781;Parent=Thaps3781;rank=3 chr3 . exon 1786150 1787559 . + . ID=Thaps3781.3;Parent=Thaps3781;constitutive=1;rank=3 chr3 . CDS 1787653 1787769 . + 0 ID=Thaps3781;Parent=Thaps3781;rank=4 chr3 . exon 1787653 1787769 . + . ID=Thaps3781.4;Parent=Thaps3781;constitutive=1;rank=4 chr3 ensembl protein_coding_gene 1793108 1794901 . + . ID=Thaps3784;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYS2];external_name=Thaps3784;logic_name=jgi_thaps3 chr3 ensembl transcript 1793108 1794901 . + . ID=Thaps3784;Parent=Thaps3784;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1793108 1794901 . + 0 ID=Thaps3784;Parent=Thaps3784;rank=1 chr3 . exon 1793108 1794901 . + . ID=Thaps3784.1;Parent=Thaps3784;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1794963 1796871 . - . ID=Thaps3785;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYS3];external_name=Thaps3785;logic_name=jgi_thaps3 chr3 ensembl transcript 1794963 1796871 . - . ID=Thaps3785;Parent=Thaps3785;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1794963 1794974 . - 0 ID=Thaps3785;Parent=Thaps3785;rank=2 chr3 . exon 1794963 1794974 . - . ID=Thaps3785.2;Parent=Thaps3785;constitutive=1;rank=2 chr3 . CDS 1795141 1796871 . - 0 ID=Thaps3785;Parent=Thaps3785;rank=1 chr3 . exon 1795141 1796871 . - . ID=Thaps3785.1;Parent=Thaps3785;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1799728 1802017 . - . ID=Thaps3787;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYS5];external_name=Thaps3787;logic_name=jgi_thaps3 chr3 ensembl transcript 1799728 1802017 . - . ID=Thaps3787;Parent=Thaps3787;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1799728 1800951 . - 0 ID=Thaps3787;Parent=Thaps3787;rank=2 chr3 . exon 1799728 1800951 . - . ID=Thaps3787.2;Parent=Thaps3787;constitutive=1;rank=2 chr3 . CDS 1801082 1802017 . - 0 ID=Thaps3787;Parent=Thaps3787;rank=1 chr3 . exon 1801082 1802017 . - . ID=Thaps3787.1;Parent=Thaps3787;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1802612 1803640 . + . ID=Thaps3788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYS6];external_name=Thaps3788;logic_name=jgi_thaps3 chr3 ensembl transcript 1802612 1803640 . + . ID=Thaps3788;Parent=Thaps3788;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1802612 1803640 . + 0 ID=Thaps3788;Parent=Thaps3788;rank=1 chr3 . exon 1802612 1803640 . + . ID=Thaps3788.1;Parent=Thaps3788;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1797572 1799461 . + . ID=Thaps40034;biotype=protein_coding;description=Threonyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BYS4];external_name=Thaps40034;logic_name=jgi_thaps3 chr3 ensembl transcript 1797572 1799461 . + . ID=Thaps40034;Parent=Thaps40034;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1797572 1798150 . + 0 ID=Thaps40034;Parent=Thaps40034;rank=1 chr3 . exon 1797572 1798150 . + . ID=Thaps40034.1;Parent=Thaps40034;constitutive=1;rank=1 chr3 . CDS 1798262 1799461 . + 0 ID=Thaps40034;Parent=Thaps40034;rank=2 chr3 . exon 1798262 1799461 . + . ID=Thaps40034.2;Parent=Thaps40034;constitutive=1;rank=2 chr3 . repeat_region 1805313 1805341 . ? . description=trf chr3 . repeat_region 1806679 1806689 . ? . description=dust chr3 . repeat_region 1807419 1807427 . ? . description=dust chr3 . repeat_region 1808594 1808644 . ? . description=dust chr3 ensembl protein_coding_gene 1803908 1805233 . + . ID=Thaps21925;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYS7];external_name=Thaps21925;logic_name=jgi_thaps3 chr3 ensembl transcript 1803908 1805233 . + . ID=Thaps21925;Parent=Thaps21925;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1803908 1805233 . + 0 ID=Thaps21925;Parent=Thaps21925;rank=1 chr3 . exon 1803908 1805233 . + . ID=Thaps21925.1;Parent=Thaps21925;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1806833 1807919 . - . ID=Thaps261904;biotype=protein_coding;description=Ubiquinol-cytochrome-c reductase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYS9];external_name=Thaps261904;logic_name=jgi_thaps3 chr3 ensembl transcript 1806833 1807919 . - . ID=Thaps261904;Parent=Thaps261904;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1806833 1807090 . - 0 ID=Thaps261904;Parent=Thaps261904;rank=2 chr3 . exon 1806833 1807090 . - . ID=Thaps261904.2;Parent=Thaps261904;constitutive=1;rank=2 chr3 . CDS 1807775 1807919 . - 0 ID=Thaps261904;Parent=Thaps261904;rank=1 chr3 . exon 1807775 1807919 . - . ID=Thaps261904.1;Parent=Thaps261904;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1811618 1814116 . - . ID=Thaps27599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYT2];external_name=Thaps27599;logic_name=jgi_thaps3 chr3 ensembl transcript 1811618 1814116 . - . ID=Thaps27599;Parent=Thaps27599;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1811618 1814116 . - 0 ID=Thaps27599;Parent=Thaps27599;rank=1 chr3 . exon 1811618 1814116 . - . ID=Thaps27599.1;Parent=Thaps27599;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1809478 1809705 . - . ID=Thaps32561;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYT0];external_name=Thaps32561;logic_name=jgi_thaps3 chr3 ensembl transcript 1809478 1809705 . - . ID=Thaps32561;Parent=Thaps32561;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1809478 1809705 . - 0 ID=Thaps32561;Parent=Thaps32561;rank=1 chr3 . exon 1809478 1809705 . - . ID=Thaps32561.1;Parent=Thaps32561;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1805550 1806665 . + . ID=Thaps3790;biotype=protein_coding;description=Carnitine/acylcarnitine translocase [Source:UniProtKB/TrEMBL%3BAcc:B8BYS8];external_name=CTL1;logic_name=jgi_thaps3 chr3 ensembl transcript 1805550 1806665 . + . ID=Thaps3790;Parent=Thaps3790;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1805550 1805964 . + 0 ID=Thaps3790;Parent=Thaps3790;rank=1 chr3 . exon 1805550 1805964 . + . ID=Thaps3790.1;Parent=Thaps3790;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1806011 1806080 . + 0 ID=Thaps3790;Parent=Thaps3790;rank=2 chr3 . exon 1806011 1806080 . + . ID=Thaps3790.2;Parent=Thaps3790;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1806128 1806665 . + 0 ID=Thaps3790;Parent=Thaps3790;rank=3 chr3 . exon 1806128 1806665 . + . ID=Thaps3790.3;Parent=Thaps3790;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 1809973 1811535 . + . ID=Thaps3793;biotype=protein_coding;description=Transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BYT1];external_name=Thaps3793;logic_name=jgi_thaps3 chr3 ensembl transcript 1809973 1811535 . + . ID=Thaps3793;Parent=Thaps3793;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1809973 1810293 . + 0 ID=Thaps3793;Parent=Thaps3793;rank=1 chr3 . exon 1809973 1810293 . + . ID=Thaps3793.1;Parent=Thaps3793;constitutive=1;rank=1 chr3 . CDS 1810538 1810675 . + 0 ID=Thaps3793;Parent=Thaps3793;rank=2 chr3 . exon 1810538 1810675 . + . ID=Thaps3793.2;Parent=Thaps3793;constitutive=1;rank=2 chr3 . CDS 1810765 1811535 . + 0 ID=Thaps3793;Parent=Thaps3793;rank=3 chr3 . exon 1810765 1811535 . + . ID=Thaps3793.3;Parent=Thaps3793;constitutive=1;rank=3 chr3 . repeat_region 1822563 1822933 . - . description=Harbinger2_TP chr3 ensembl protein_coding_gene 1819582 1821303 . - . ID=Thaps21927;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYT4];external_name=Thaps21927;logic_name=jgi_thaps3 chr3 ensembl transcript 1819582 1821303 . - . ID=Thaps21927;Parent=Thaps21927;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1819582 1820069 . - 0 ID=Thaps21927;Parent=Thaps21927;rank=2 chr3 . exon 1819582 1820069 . - . ID=Thaps21927.2;Parent=Thaps21927;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1820157 1821303 . - 0 ID=Thaps21927;Parent=Thaps21927;rank=1 chr3 . exon 1820157 1821303 . - . ID=Thaps21927.1;Parent=Thaps21927;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1816776 1818665 . - . ID=Thaps3795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYT3];external_name=Thaps3795;logic_name=jgi_thaps3 chr3 ensembl transcript 1816776 1818665 . - . ID=Thaps3795;Parent=Thaps3795;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1816776 1817401 . - 0 ID=Thaps3795;Parent=Thaps3795;rank=3 chr3 . exon 1816776 1817401 . - . ID=Thaps3795.3;Parent=Thaps3795;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1817516 1817636 . - 0 ID=Thaps3795;Parent=Thaps3795;rank=2 chr3 . exon 1817516 1817636 . - . ID=Thaps3795.2;Parent=Thaps3795;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1817772 1818665 . - 0 ID=Thaps3795;Parent=Thaps3795;rank=1 chr3 . exon 1817772 1818665 . - . ID=Thaps3795.1;Parent=Thaps3795;constitutive=1;rank=1 chr3 . repeat_region 1822799 1822888 . ? . description=trf chr3 . repeat_region 1824754 1824871 . ? . description=trf chr3 . repeat_region 1824871 1824882 . ? . description=dust chr3 . repeat_region 1825026 1825033 . ? . description=dust chr3 . repeat_region 1825257 1825288 . ? . description=trf chr3 . repeat_region 1831836 1831861 . ? . description=trf chr3 ensembl protein_coding_gene 1829652 1831562 . + . ID=Thaps21929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYT7];external_name=Thaps21929;logic_name=jgi_thaps3 chr3 ensembl transcript 1829652 1831562 . + . ID=Thaps21929;Parent=Thaps21929;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1829652 1831562 . + 0 ID=Thaps21929;Parent=Thaps21929;rank=1 chr3 . exon 1829652 1831562 . + . ID=Thaps21929.1;Parent=Thaps21929;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1828364 1829480 . - . ID=Thaps261905;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYT6];external_name=Thaps261905;logic_name=jgi_thaps3 chr3 ensembl transcript 1828364 1829480 . - . ID=Thaps261905;Parent=Thaps261905;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1828364 1829295 . - 0 ID=Thaps261905;Parent=Thaps261905;rank=2 chr3 . exon 1828364 1829295 . - . ID=Thaps261905.2;Parent=Thaps261905;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1829332 1829480 . - 0 ID=Thaps261905;Parent=Thaps261905;rank=1 chr3 . exon 1829332 1829480 . - . ID=Thaps261905.1;Parent=Thaps261905;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1825408 1827191 . - . ID=Thaps3797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYT5];external_name=Thaps3797;logic_name=jgi_thaps3 chr3 ensembl transcript 1825408 1827191 . - . ID=Thaps3797;Parent=Thaps3797;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1825408 1826400 . - 0 ID=Thaps3797;Parent=Thaps3797;rank=2 chr3 . exon 1825408 1826400 . - . ID=Thaps3797.2;Parent=Thaps3797;constitutive=1;rank=2 chr3 . CDS 1826496 1827191 . - 0 ID=Thaps3797;Parent=Thaps3797;rank=1 chr3 . exon 1826496 1827191 . - . ID=Thaps3797.1;Parent=Thaps3797;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1831778 1832920 . + . ID=Thaps3800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYT8];external_name=Thaps3800;logic_name=jgi_thaps3 chr3 ensembl transcript 1831778 1832920 . + . ID=Thaps3800;Parent=Thaps3800;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1831778 1832341 . + 0 ID=Thaps3800;Parent=Thaps3800;rank=1 chr3 . exon 1831778 1832341 . + . ID=Thaps3800.1;Parent=Thaps3800;constitutive=1;rank=1 chr3 . CDS 1832495 1832920 . + 0 ID=Thaps3800;Parent=Thaps3800;rank=2 chr3 . exon 1832495 1832920 . + . ID=Thaps3800.2;Parent=Thaps3800;constitutive=1;rank=2 chr3 . repeat_region 1834649 1834732 . - . description=TE2b_TP chr3 . repeat_region 1835593 1835696 . + . description=TE2c_TP chr3 . repeat_region 1835867 1835943 . + . description=MuDR1_TP chr3 ensembl protein_coding_gene 1836093 1837787 . + . ID=Thaps21931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYU0];external_name=Thaps21931;logic_name=jgi_thaps3 chr3 ensembl transcript 1836093 1837787 . + . ID=Thaps21931;Parent=Thaps21931;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1836093 1837787 . + 0 ID=Thaps21931;Parent=Thaps21931;rank=1 chr3 . exon 1836093 1837787 . + . ID=Thaps21931.1;Parent=Thaps21931;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1841003 1842961 . - . ID=Thaps32859;biotype=protein_coding;description=Probable aspartyl aminopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8BYU3];external_name=Thaps32859;logic_name=jgi_thaps3 chr3 ensembl transcript 1841003 1842961 . - . ID=Thaps32859;Parent=Thaps32859;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1841003 1841292 . - 0 ID=Thaps32859;Parent=Thaps32859;rank=7 chr3 . exon 1841003 1841292 . - . ID=Thaps32859.7;Parent=Thaps32859;constitutive=1;ensembl_end_phase=2;rank=7 chr3 . CDS 1841381 1841623 . - 0 ID=Thaps32859;Parent=Thaps32859;rank=6 chr3 . exon 1841381 1841623 . - . ID=Thaps32859.6;Parent=Thaps32859;constitutive=1;rank=6 chr3 . CDS 1841708 1842181 . - 0 ID=Thaps32859;Parent=Thaps32859;rank=5 chr3 . exon 1841708 1842181 . - . ID=Thaps32859.5;Parent=Thaps32859;constitutive=1;rank=5 chr3 . CDS 1842287 1842339 . - 0 ID=Thaps32859;Parent=Thaps32859;rank=4 chr3 . exon 1842287 1842339 . - . ID=Thaps32859.4;Parent=Thaps32859;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1842436 1842459 . - 0 ID=Thaps32859;Parent=Thaps32859;rank=3 chr3 . exon 1842436 1842459 . - . ID=Thaps32859.3;Parent=Thaps32859;constitutive=1;rank=3 chr3 . CDS 1842559 1842748 . - 0 ID=Thaps32859;Parent=Thaps32859;rank=2 chr3 . exon 1842559 1842748 . - . ID=Thaps32859.2;Parent=Thaps32859;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1842841 1842961 . - 0 ID=Thaps32859;Parent=Thaps32859;rank=1 chr3 ensembl protein_coding_gene 1837885 1839496 . - . ID=Thaps3803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYU1];external_name=Thaps3803;logic_name=jgi_thaps3 chr3 ensembl transcript 1837885 1839496 . - . ID=Thaps3803;Parent=Thaps3803;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1837885 1839236 . - 0 ID=Thaps3803;Parent=Thaps3803;rank=2 chr3 . exon 1837885 1839236 . - . ID=Thaps3803.2;Parent=Thaps3803;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1839397 1839496 . - 0 ID=Thaps3803;Parent=Thaps3803;rank=1 chr3 . exon 1839397 1839496 . - . ID=Thaps3803.1;Parent=Thaps3803;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1839920 1840723 . + . ID=Thaps3804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYU2];external_name=Thaps3804;logic_name=jgi_thaps3 chr3 ensembl transcript 1839920 1840723 . + . ID=Thaps3804;Parent=Thaps3804;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1839920 1840723 . + 0 ID=Thaps3804;Parent=Thaps3804;rank=1 chr3 . exon 1839920 1840723 . + . ID=Thaps3804.1;Parent=Thaps3804;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1833171 1834499 . - . ID=Thaps40044;biotype=protein_coding;description=Methionine aminopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8BYT9];external_name=MAP1;logic_name=jgi_thaps3 chr3 ensembl transcript 1833171 1834499 . - . ID=Thaps40044;Parent=Thaps40044;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1833171 1833738 . - 0 ID=Thaps40044;Parent=Thaps40044;rank=2 chr3 . exon 1833171 1833738 . - . ID=Thaps40044.2;Parent=Thaps40044;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1833832 1834499 . - 0 ID=Thaps40044;Parent=Thaps40044;rank=1 chr3 . exon 1833832 1834499 . - . ID=Thaps40044.1;Parent=Thaps40044;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1847444 1848067 . + . ID=Thaps17292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYU5];external_name=Thaps17292;logic_name=jgi_thaps3 chr3 ensembl transcript 1847444 1848067 . + . ID=Thaps17292;Parent=Thaps17292;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1847444 1848067 . + 0 ID=Thaps17292;Parent=Thaps17292;rank=1 chr3 . exon 1847444 1848067 . + . ID=Thaps17292.1;Parent=Thaps17292;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1845565 1847123 . - . ID=Thaps21933;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYU4];external_name=Thaps21933;logic_name=jgi_thaps3 chr3 ensembl transcript 1845565 1847123 . - . ID=Thaps21933;Parent=Thaps21933;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1845565 1846338 . - 0 ID=Thaps21933;Parent=Thaps21933;rank=2 chr3 . exon 1845565 1846338 . - . ID=Thaps21933.2;Parent=Thaps21933;constitutive=1;rank=2 chr3 . CDS 1846383 1847123 . - 0 ID=Thaps21933;Parent=Thaps21933;rank=1 chr3 . exon 1846383 1847123 . - . ID=Thaps21933.1;Parent=Thaps21933;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1850578 1853630 . - . ID=Thaps261908;biotype=protein_coding;description=Para-aminobenzoate synthase and glutamine amidotransferase%2C a bifunctional enzyme-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYU6];external_name=Thaps261908;logic_name=jgi_thaps3 chr3 ensembl transcript 1850578 1853630 . - . ID=Thaps261908;Parent=Thaps261908;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1850578 1851995 . - 0 ID=Thaps261908;Parent=Thaps261908;rank=6 chr3 . exon 1850578 1851995 . - . ID=Thaps261908.6;Parent=Thaps261908;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 1852110 1852275 . - 0 ID=Thaps261908;Parent=Thaps261908;rank=5 chr3 . exon 1852110 1852275 . - . ID=Thaps261908.5;Parent=Thaps261908;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1852351 1852441 . - 0 ID=Thaps261908;Parent=Thaps261908;rank=4 chr3 . exon 1852351 1852441 . - . ID=Thaps261908.4;Parent=Thaps261908;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1852571 1852762 . - 0 ID=Thaps261908;Parent=Thaps261908;rank=3 chr3 . CDS 1852832 1852965 . - 0 ID=Thaps261908;Parent=Thaps261908;rank=2 chr3 . CDS 1853011 1853630 . - 0 ID=Thaps261908;Parent=Thaps261908;rank=1 chr3 . exon 1842841 1842961 . - . ID=Thaps32859.1;Parent=Thaps32859;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 1859437 1860231 . + . description=scaffold_6_68_3_186663_187626 chr3 . exon 1852571 1852762 . - . ID=Thaps261908.3;Parent=Thaps261908;constitutive=1;rank=3 chr3 . exon 1852832 1852965 . - . ID=Thaps261908.2;Parent=Thaps261908;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 1853011 1853630 . - . ID=Thaps261908.1;Parent=Thaps261908;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1860775 1861477 . + . ID=Thaps261910;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYU8];external_name=Thaps261910;logic_name=jgi_thaps3 chr3 ensembl transcript 1860775 1861477 . + . ID=Thaps261910;Parent=Thaps261910;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1860775 1861477 . + 0 ID=Thaps261910;Parent=Thaps261910;rank=1 chr3 . exon 1860775 1861477 . + . ID=Thaps261910.1;Parent=Thaps261910;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1854486 1857650 . + . ID=Thaps268541;biotype=protein_coding;description=Ubiquitin-activating enzyme E1 [Source:UniProtKB/TrEMBL%3BAcc:B8BYU7];external_name=UBA1;logic_name=jgi_thaps3 chr3 ensembl transcript 1854486 1857650 . + . ID=Thaps268541;Parent=Thaps268541;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1854486 1854784 . + 0 ID=Thaps268541;Parent=Thaps268541;rank=1 chr3 . exon 1854486 1854784 . + . ID=Thaps268541.1;Parent=Thaps268541;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1854809 1857037 . + 0 ID=Thaps268541;Parent=Thaps268541;rank=2 chr3 . exon 1854809 1857037 . + . ID=Thaps268541.2;Parent=Thaps268541;constitutive=1;rank=2 chr3 . CDS 1857131 1857650 . + 0 ID=Thaps268541;Parent=Thaps268541;rank=3 chr3 . exon 1857131 1857650 . + . ID=Thaps268541.3;Parent=Thaps268541;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 1861858 1864066 . - . ID=Thaps3811;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYU9];external_name=Thaps3811;logic_name=jgi_thaps3 chr3 ensembl transcript 1861858 1864066 . - . ID=Thaps3811;Parent=Thaps3811;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1861858 1863768 . - 0 ID=Thaps3811;Parent=Thaps3811;rank=2 chr3 . exon 1861858 1863768 . - . ID=Thaps3811.2;Parent=Thaps3811;constitutive=1;rank=2 chr3 . CDS 1864004 1864066 . - 0 ID=Thaps3811;Parent=Thaps3811;rank=1 chr3 . repeat_region 1865266 1865299 . ? . description=trf chr3 . repeat_region 1865539 1865613 . - . description=TE2b_TP chr3 . repeat_region 1865551 1865590 . ? . description=trf chr3 . repeat_region 1871105 1871135 . ? . description=trf chr3 ensembl protein_coding_gene 1866579 1868327 . - . ID=Thaps21939;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYV1];external_name=Thaps21939;logic_name=jgi_thaps3 chr3 ensembl transcript 1866579 1868327 . - . ID=Thaps21939;Parent=Thaps21939;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1866579 1866767 . - 0 ID=Thaps21939;Parent=Thaps21939;rank=3 chr3 . exon 1866579 1866767 . - . ID=Thaps21939.3;Parent=Thaps21939;constitutive=1;rank=3 chr3 . CDS 1866857 1867582 . - 0 ID=Thaps21939;Parent=Thaps21939;rank=2 chr3 . exon 1866857 1867582 . - . ID=Thaps21939.2;Parent=Thaps21939;constitutive=1;rank=2 chr3 . CDS 1867674 1868327 . - 0 ID=Thaps21939;Parent=Thaps21939;rank=1 chr3 . exon 1867674 1868327 . - . ID=Thaps21939.1;Parent=Thaps21939;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1865683 1866482 . + . ID=Thaps32684;biotype=protein_coding;description=Probable uracil phosphoribosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BYV0];external_name=Thaps32684;logic_name=jgi_thaps3 chr3 ensembl transcript 1865683 1866482 . + . ID=Thaps32684;Parent=Thaps32684;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1865683 1865779 . + 0 ID=Thaps32684;Parent=Thaps32684;rank=1 chr3 . exon 1865683 1865779 . + . ID=Thaps32684.1;Parent=Thaps32684;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1865881 1866482 . + 0 ID=Thaps32684;Parent=Thaps32684;rank=2 chr3 . exon 1865881 1866482 . + . ID=Thaps32684.2;Parent=Thaps32684;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 1871676 1872251 . + . ID=Thaps33131;biotype=protein_coding;description=Fucoxanthin chl a/c light-harvesting protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYV4];external_name=LHCR7;logic_name=jgi_thaps3 chr3 ensembl transcript 1871676 1872251 . + . ID=Thaps33131;Parent=Thaps33131;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1871676 1872251 . + 0 ID=Thaps33131;Parent=Thaps33131;rank=1 chr3 . exon 1871676 1872251 . + . ID=Thaps33131.1;Parent=Thaps33131;constitutive=1;rank=1 chr3 . exon 1864004 1864066 . - . ID=Thaps3811.1;Parent=Thaps3811;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1868645 1870073 . + . ID=Thaps3814;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYV2];external_name=Thaps3814;logic_name=jgi_thaps3 chr3 ensembl transcript 1868645 1870073 . + . ID=Thaps3814;Parent=Thaps3814;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1868645 1868864 . + 0 ID=Thaps3814;Parent=Thaps3814;rank=1 chr3 . exon 1868645 1868864 . + . ID=Thaps3814.1;Parent=Thaps3814;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1869052 1869898 . + 0 ID=Thaps3814;Parent=Thaps3814;rank=2 chr3 . exon 1869052 1869898 . + . ID=Thaps3814.2;Parent=Thaps3814;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1869932 1870073 . + 0 ID=Thaps3814;Parent=Thaps3814;rank=3 chr3 . exon 1869932 1870073 . + . ID=Thaps3814.3;Parent=Thaps3814;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 1870428 1871300 . - . ID=Thaps3815;biotype=protein_coding;description=Member of fucoxanthin chlorophyll a/c family%2C lhca clade [Source:UniProtKB/TrEMBL%3BAcc:B8BYV3];external_name=LHCA6;logic_name=jgi_thaps3 chr3 ensembl transcript 1870428 1871300 . - . ID=Thaps3815;Parent=Thaps3815;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1870428 1870952 . - 0 ID=Thaps3815;Parent=Thaps3815;rank=2 chr3 . exon 1870428 1870952 . - . ID=Thaps3815.2;Parent=Thaps3815;constitutive=1;rank=2 chr3 . CDS 1871166 1871300 . - 0 ID=Thaps3815;Parent=Thaps3815;rank=1 chr3 . exon 1871166 1871300 . - . ID=Thaps3815.1;Parent=Thaps3815;constitutive=1;rank=1 chr3 . repeat_region 1874363 1874412 . ? . description=dust chr3 ensembl protein_coding_gene 1876484 1877647 . + . ID=Thaps21941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYV7];external_name=Thaps21941;logic_name=jgi_thaps3 chr3 ensembl transcript 1876484 1877647 . + . ID=Thaps21941;Parent=Thaps21941;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1876484 1876928 . + 0 ID=Thaps21941;Parent=Thaps21941;rank=1 chr3 . exon 1876484 1876928 . + . ID=Thaps21941.1;Parent=Thaps21941;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1877007 1877456 . + 0 ID=Thaps21941;Parent=Thaps21941;rank=2 chr3 . exon 1877007 1877456 . + . ID=Thaps21941.2;Parent=Thaps21941;constitutive=1;rank=2 chr3 . CDS 1877544 1877647 . + 0 ID=Thaps21941;Parent=Thaps21941;rank=3 chr3 . exon 1877544 1877647 . + . ID=Thaps21941.3;Parent=Thaps21941;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1880375 1882498 . + . ID=Thaps21943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYV9];external_name=Thaps21943;logic_name=jgi_thaps3 chr3 ensembl transcript 1880375 1882498 . + . ID=Thaps21943;Parent=Thaps21943;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1880375 1882498 . + 0 ID=Thaps21943;Parent=Thaps21943;rank=1 chr3 . exon 1880375 1882498 . + . ID=Thaps21943.1;Parent=Thaps21943;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1874853 1876163 . - . ID=Thaps268543;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYV6];external_name=Thaps268543;logic_name=jgi_thaps3 chr3 ensembl transcript 1874853 1876163 . - . ID=Thaps268543;Parent=Thaps268543;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1874853 1875554 . - 0 ID=Thaps268543;Parent=Thaps268543;rank=2 chr3 . exon 1874853 1875554 . - . ID=Thaps268543.2;Parent=Thaps268543;constitutive=1;rank=2 chr3 . CDS 1875624 1876163 . - 0 ID=Thaps268543;Parent=Thaps268543;rank=1 chr3 . exon 1875624 1876163 . - . ID=Thaps268543.1;Parent=Thaps268543;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1878359 1880215 . - . ID=Thaps268544;biotype=protein_coding;description=Probable glactonolatone dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BYV8];external_name=Thaps268544;logic_name=jgi_thaps3 chr3 ensembl transcript 1878359 1880215 . - . ID=Thaps268544;Parent=Thaps268544;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1878359 1880215 . - 0 ID=Thaps268544;Parent=Thaps268544;rank=1 chr3 . exon 1878359 1880215 . - . ID=Thaps268544.1;Parent=Thaps268544;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1872677 1874572 . - . ID=Thaps3817;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYV5];external_name=Thaps3817;logic_name=jgi_thaps3 chr3 ensembl transcript 1872677 1874572 . - . ID=Thaps3817;Parent=Thaps3817;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1872677 1872720 . - 0 ID=Thaps3817;Parent=Thaps3817;rank=5 chr3 . exon 1872677 1872720 . - . ID=Thaps3817.5;Parent=Thaps3817;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 1872768 1873011 . - 0 ID=Thaps3817;Parent=Thaps3817;rank=4 chr3 . exon 1872768 1873011 . - . ID=Thaps3817.4;Parent=Thaps3817;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1873095 1873524 . - 0 ID=Thaps3817;Parent=Thaps3817;rank=3 chr3 . exon 1873095 1873524 . - . ID=Thaps3817.3;Parent=Thaps3817;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1873920 1874480 . - 0 ID=Thaps3817;Parent=Thaps3817;rank=2 chr3 . exon 1873920 1874480 . - . ID=Thaps3817.2;Parent=Thaps3817;constitutive=1;rank=2 chr3 . CDS 1874523 1874572 . - 0 ID=Thaps3817;Parent=Thaps3817;rank=1 chr3 . exon 1874523 1874572 . - . ID=Thaps3817.1;Parent=Thaps3817;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . repeat_region 1890303 1890324 . ? . description=trf chr3 ensembl protein_coding_gene 1890619 1892529 . + . ID=Thaps21947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYW4];external_name=Thaps21947;logic_name=jgi_thaps3 chr3 ensembl transcript 1890619 1892529 . + . ID=Thaps21947;Parent=Thaps21947;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1890619 1890746 . + 0 ID=Thaps21947;Parent=Thaps21947;rank=1 chr3 . exon 1890619 1890746 . + . ID=Thaps21947.1;Parent=Thaps21947;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1890875 1891215 . + 0 ID=Thaps21947;Parent=Thaps21947;rank=2 chr3 . exon 1890875 1891215 . + . ID=Thaps21947.2;Parent=Thaps21947;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1891299 1891501 . + 0 ID=Thaps21947;Parent=Thaps21947;rank=3 chr3 . exon 1891299 1891501 . + . ID=Thaps21947.3;Parent=Thaps21947;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1891579 1892529 . + 0 ID=Thaps21947;Parent=Thaps21947;rank=4 chr3 . exon 1891579 1892529 . + . ID=Thaps21947.4;Parent=Thaps21947;constitutive=1;rank=4 chr3 ensembl protein_coding_gene 1886608 1887791 . - . ID=Thaps261916;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYW3];external_name=Thaps261916;logic_name=jgi_thaps3 chr3 ensembl transcript 1886608 1887791 . - . ID=Thaps261916;Parent=Thaps261916;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1886608 1886783 . - 0 ID=Thaps261916;Parent=Thaps261916;rank=5 chr3 . exon 1886608 1886783 . - . ID=Thaps261916.5;Parent=Thaps261916;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 1886991 1887019 . - 0 ID=Thaps261916;Parent=Thaps261916;rank=4 chr3 . exon 1886991 1887019 . - . ID=Thaps261916.4;Parent=Thaps261916;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1887102 1887201 . - 0 ID=Thaps261916;Parent=Thaps261916;rank=3 chr3 . exon 1887102 1887201 . - . ID=Thaps261916.3;Parent=Thaps261916;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1887296 1887474 . - 0 ID=Thaps261916;Parent=Thaps261916;rank=2 chr3 . exon 1887296 1887474 . - . ID=Thaps261916.2;Parent=Thaps261916;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1887523 1887791 . - 0 ID=Thaps261916;Parent=Thaps261916;rank=1 chr3 . exon 1887523 1887791 . - . ID=Thaps261916.1;Parent=Thaps261916;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1883929 1884573 . + . ID=Thaps27618;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYW1];external_name=Thaps27618;logic_name=jgi_thaps3 chr3 ensembl transcript 1883929 1884573 . + . ID=Thaps27618;Parent=Thaps27618;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1883929 1884573 . + 0 ID=Thaps27618;Parent=Thaps27618;rank=1 chr3 . exon 1883929 1884573 . + . ID=Thaps27618.1;Parent=Thaps27618;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1883050 1883655 . + . ID=Thaps3822;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYW0];external_name=Thaps3822;logic_name=jgi_thaps3 chr3 ensembl transcript 1883050 1883655 . + . ID=Thaps3822;Parent=Thaps3822;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1883050 1883655 . + 0 ID=Thaps3822;Parent=Thaps3822;rank=1 chr3 . exon 1883050 1883655 . + . ID=Thaps3822.1;Parent=Thaps3822;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1884900 1885581 . + . ID=Thaps3824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYW2];external_name=Thaps3824;logic_name=jgi_thaps3 chr3 ensembl transcript 1884900 1885581 . + . ID=Thaps3824;Parent=Thaps3824;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1884900 1885036 . + 0 ID=Thaps3824;Parent=Thaps3824;rank=1 chr3 . exon 1884900 1885036 . + . ID=Thaps3824.1;Parent=Thaps3824;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1885127 1885229 . + 0 ID=Thaps3824;Parent=Thaps3824;rank=2 chr3 . exon 1885127 1885229 . + . ID=Thaps3824.2;Parent=Thaps3824;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1885471 1885581 . + 0 ID=Thaps3824;Parent=Thaps3824;rank=3 chr3 . exon 1885471 1885581 . + . ID=Thaps3824.3;Parent=Thaps3824;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 1899224 1899511 . + . ID=Thaps20065;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYW7];external_name=Thaps20065;logic_name=jgi_thaps3 chr3 ensembl transcript 1899224 1899511 . + . ID=Thaps20065;Parent=Thaps20065;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1899224 1899511 . + 0 ID=Thaps20065;Parent=Thaps20065;rank=1 chr3 . exon 1899224 1899511 . + . ID=Thaps20065.1;Parent=Thaps20065;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1892640 1893905 . - . ID=Thaps21948;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYW5];external_name=Thaps21948;logic_name=jgi_thaps3 chr3 ensembl transcript 1892640 1893905 . - . ID=Thaps21948;Parent=Thaps21948;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1892640 1893126 . - 0 ID=Thaps21948;Parent=Thaps21948;rank=2 chr3 . exon 1892640 1893126 . - . ID=Thaps21948.2;Parent=Thaps21948;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1893211 1893905 . - 0 ID=Thaps21948;Parent=Thaps21948;rank=1 chr3 . exon 1893211 1893905 . - . ID=Thaps21948.1;Parent=Thaps21948;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 1894643 1897539 . - . ID=Thaps21949;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYW6];external_name=Thaps21949;logic_name=jgi_thaps3 chr3 ensembl transcript 1894643 1897539 . - . ID=Thaps21949;Parent=Thaps21949;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1894643 1894821 . - 0 ID=Thaps21949;Parent=Thaps21949;rank=6 chr3 . exon 1894643 1894821 . - . ID=Thaps21949.6;Parent=Thaps21949;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 1894937 1895213 . - 0 ID=Thaps21949;Parent=Thaps21949;rank=5 chr3 . exon 1894937 1895213 . - . ID=Thaps21949.5;Parent=Thaps21949;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1895310 1895662 . - 0 ID=Thaps21949;Parent=Thaps21949;rank=4 chr3 . exon 1895310 1895662 . - . ID=Thaps21949.4;Parent=Thaps21949;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1896177 1896227 . - 0 ID=Thaps21949;Parent=Thaps21949;rank=3 chr3 . exon 1896177 1896227 . - . ID=Thaps21949.3;Parent=Thaps21949;constitutive=1;rank=3 chr3 . CDS 1896270 1896951 . - 0 ID=Thaps21949;Parent=Thaps21949;rank=2 chr3 . exon 1896270 1896951 . - . ID=Thaps21949.2;Parent=Thaps21949;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1897036 1897539 . - 0 ID=Thaps21949;Parent=Thaps21949;rank=1 chr3 . exon 1897036 1897539 . - . ID=Thaps21949.1;Parent=Thaps21949;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1899971 1902832 . - . ID=Thaps268546;biotype=protein_coding;description=Phosphoenolpyruvate carboxylase [Source:UniProtKB/TrEMBL%3BAcc:B8BYW8];external_name=PPC1;logic_name=jgi_thaps3 chr3 ensembl transcript 1899971 1902832 . - . ID=Thaps268546;Parent=Thaps268546;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1899971 1900584 . - 0 ID=Thaps268546;Parent=Thaps268546;rank=5 chr3 . exon 1899971 1900584 . - . ID=Thaps268546.5;Parent=Thaps268546;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 1900651 1901710 . - 0 ID=Thaps268546;Parent=Thaps268546;rank=4 chr3 . exon 1900651 1901710 . - . ID=Thaps268546.4;Parent=Thaps268546;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 1901750 1901888 . - 0 ID=Thaps268546;Parent=Thaps268546;rank=3 chr3 . exon 1901750 1901888 . - . ID=Thaps268546.3;Parent=Thaps268546;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1901913 1902430 . - 0 ID=Thaps268546;Parent=Thaps268546;rank=2 chr3 . exon 1901913 1902430 . - . ID=Thaps268546.2;Parent=Thaps268546;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1902512 1902832 . - 0 ID=Thaps268546;Parent=Thaps268546;rank=1 chr3 ensembl protein_coding_gene 1903561 1906974 . + . ID=Thaps21951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYW9];external_name=Thaps21951;logic_name=jgi_thaps3 chr3 ensembl transcript 1903561 1906974 . + . ID=Thaps21951;Parent=Thaps21951;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1903561 1905188 . + 0 ID=Thaps21951;Parent=Thaps21951;rank=1 chr3 . exon 1903561 1905188 . + . ID=Thaps21951.1;Parent=Thaps21951;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1905279 1906099 . + 0 ID=Thaps21951;Parent=Thaps21951;rank=2 chr3 . exon 1905279 1906099 . + . ID=Thaps21951.2;Parent=Thaps21951;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1906180 1906857 . + 0 ID=Thaps21951;Parent=Thaps21951;rank=3 chr3 . exon 1906180 1906857 . + . ID=Thaps21951.3;Parent=Thaps21951;constitutive=1;rank=3 chr3 . CDS 1906934 1906974 . + 0 ID=Thaps21951;Parent=Thaps21951;rank=4 chr3 . exon 1906934 1906974 . + . ID=Thaps21951.4;Parent=Thaps21951;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . exon 1902512 1902832 . - . ID=Thaps268546.1;Parent=Thaps268546;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1909542 1912042 . - . ID=Thaps268548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYX0];external_name=Thaps268548;logic_name=jgi_thaps3 chr3 ensembl transcript 1909542 1912042 . - . ID=Thaps268548;Parent=Thaps268548;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1909542 1909869 . - 0 ID=Thaps268548;Parent=Thaps268548;rank=7 chr3 . exon 1909542 1909869 . - . ID=Thaps268548.7;Parent=Thaps268548;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . CDS 1909951 1910066 . - 0 ID=Thaps268548;Parent=Thaps268548;rank=6 chr3 . exon 1909951 1910066 . - . ID=Thaps268548.6;Parent=Thaps268548;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . CDS 1910149 1910223 . - 0 ID=Thaps268548;Parent=Thaps268548;rank=5 chr3 . exon 1910149 1910223 . - . ID=Thaps268548.5;Parent=Thaps268548;constitutive=1;rank=5 chr3 . CDS 1910298 1911283 . - 0 ID=Thaps268548;Parent=Thaps268548;rank=4 chr3 . exon 1910298 1911283 . - . ID=Thaps268548.4;Parent=Thaps268548;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1911364 1911585 . - 0 ID=Thaps268548;Parent=Thaps268548;rank=3 chr3 . exon 1911364 1911585 . - . ID=Thaps268548.3;Parent=Thaps268548;constitutive=1;rank=3 chr3 . CDS 1911721 1911865 . - 0 ID=Thaps268548;Parent=Thaps268548;rank=2 chr3 . exon 1911721 1911865 . - . ID=Thaps268548.2;Parent=Thaps268548;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1911920 1912042 . - 0 ID=Thaps268548;Parent=Thaps268548;rank=1 chr3 . exon 1911920 1912042 . - . ID=Thaps268548.1;Parent=Thaps268548;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1913714 1915546 . + . ID=Thaps21954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYX2];external_name=Thaps21954;logic_name=jgi_thaps3 chr3 ensembl transcript 1913714 1915546 . + . ID=Thaps21954;Parent=Thaps21954;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1913714 1914256 . + 0 ID=Thaps21954;Parent=Thaps21954;rank=1 chr3 . exon 1913714 1914256 . + . ID=Thaps21954.1;Parent=Thaps21954;constitutive=1;rank=1 chr3 . CDS 1914386 1915546 . + 0 ID=Thaps21954;Parent=Thaps21954;rank=2 chr3 . exon 1914386 1915546 . + . ID=Thaps21954.2;Parent=Thaps21954;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 1915799 1917637 . - . ID=Thaps21955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYX3];external_name=Thaps21955;logic_name=jgi_thaps3 chr3 ensembl transcript 1915799 1917637 . - . ID=Thaps21955;Parent=Thaps21955;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1915799 1917637 . - 0 ID=Thaps21955;Parent=Thaps21955;rank=1 chr3 . exon 1915799 1917637 . - . ID=Thaps21955.1;Parent=Thaps21955;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1920104 1923864 . + . ID=Thaps21956;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYX5];external_name=Thaps21956;logic_name=jgi_thaps3 chr3 ensembl transcript 1920104 1923864 . + . ID=Thaps21956;Parent=Thaps21956;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1920104 1920206 . + 0 ID=Thaps21956;Parent=Thaps21956;rank=1 chr3 . exon 1920104 1920206 . + . ID=Thaps21956.1;Parent=Thaps21956;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1920286 1921183 . + 0 ID=Thaps21956;Parent=Thaps21956;rank=2 chr3 . exon 1920286 1921183 . + . ID=Thaps21956.2;Parent=Thaps21956;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1921264 1921298 . + 0 ID=Thaps21956;Parent=Thaps21956;rank=3 chr3 . exon 1921264 1921298 . + . ID=Thaps21956.3;Parent=Thaps21956;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1921377 1921516 . + 0 ID=Thaps21956;Parent=Thaps21956;rank=4 chr3 . exon 1921377 1921516 . + . ID=Thaps21956.4;Parent=Thaps21956;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1921594 1921669 . + 0 ID=Thaps21956;Parent=Thaps21956;rank=5 chr3 . exon 1921594 1921669 . + . ID=Thaps21956.5;Parent=Thaps21956;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1921754 1922299 . + 0 ID=Thaps21956;Parent=Thaps21956;rank=6 chr3 . exon 1921754 1922299 . + . ID=Thaps21956.6;Parent=Thaps21956;constitutive=1;rank=6 chr3 . CDS 1922542 1922575 . + 0 ID=Thaps21956;Parent=Thaps21956;rank=7 chr3 . CDS 1922616 1923864 . + 0 ID=Thaps21956;Parent=Thaps21956;rank=8 chr3 ensembl protein_coding_gene 1912660 1912932 . + . ID=Thaps32525;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYX1];external_name=Thaps32525;logic_name=jgi_thaps3 chr3 ensembl transcript 1912660 1912932 . + . ID=Thaps32525;Parent=Thaps32525;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1912660 1912932 . + 0 ID=Thaps32525;Parent=Thaps32525;rank=1 chr3 . exon 1912660 1912932 . + . ID=Thaps32525.1;Parent=Thaps32525;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1917959 1919806 . + . ID=Thaps3837;biotype=protein_coding;description=Probable 5'-nucleotidase [Source:UniProtKB/TrEMBL%3BAcc:B8BYX4];external_name=Thaps3837;logic_name=jgi_thaps3 chr3 ensembl transcript 1917959 1919806 . + . ID=Thaps3837;Parent=Thaps3837;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1917959 1919806 . + 0 ID=Thaps3837;Parent=Thaps3837;rank=1 chr3 . exon 1917959 1919806 . + . ID=Thaps3837.1;Parent=Thaps3837;constitutive=1;rank=1 chr3 . exon 1922542 1922575 . + . ID=Thaps21956.7;Parent=Thaps21956;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . exon 1922616 1923864 . + . ID=Thaps21956.8;Parent=Thaps21956;constitutive=1;ensembl_end_phase=1;rank=8 chr3 ensembl protein_coding_gene 1928704 1929504 . - . ID=Thaps21957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYX8];external_name=Thaps21957;logic_name=jgi_thaps3 chr3 ensembl transcript 1928704 1929504 . - . ID=Thaps21957;Parent=Thaps21957;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1928704 1929504 . - 0 ID=Thaps21957;Parent=Thaps21957;rank=1 chr3 . exon 1928704 1929504 . - . ID=Thaps21957.1;Parent=Thaps21957;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1924017 1924573 . - . ID=Thaps3839;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYX6];external_name=Thaps3839;logic_name=jgi_thaps3 chr3 ensembl transcript 1924017 1924573 . - . ID=Thaps3839;Parent=Thaps3839;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1924017 1924027 . - 0 ID=Thaps3839;Parent=Thaps3839;rank=2 chr3 . exon 1924017 1924027 . - . ID=Thaps3839.2;Parent=Thaps3839;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1924138 1924573 . - 0 ID=Thaps3839;Parent=Thaps3839;rank=1 chr3 . exon 1924138 1924573 . - . ID=Thaps3839.1;Parent=Thaps3839;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1926184 1928072 . + . ID=Thaps3840;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYX7];external_name=Thaps3840;logic_name=jgi_thaps3 chr3 ensembl transcript 1926184 1928072 . + . ID=Thaps3840;Parent=Thaps3840;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1926184 1927101 . + 0 ID=Thaps3840;Parent=Thaps3840;rank=1 chr3 . exon 1926184 1927101 . + . ID=Thaps3840.1;Parent=Thaps3840;constitutive=1;rank=1 chr3 . CDS 1927170 1927434 . + 0 ID=Thaps3840;Parent=Thaps3840;rank=2 chr3 . exon 1927170 1927434 . + . ID=Thaps3840.2;Parent=Thaps3840;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1927534 1927892 . + 0 ID=Thaps3840;Parent=Thaps3840;rank=3 chr3 . exon 1927534 1927892 . + . ID=Thaps3840.3;Parent=Thaps3840;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 1928034 1928072 . + 0 ID=Thaps3840;Parent=Thaps3840;rank=4 chr3 . exon 1928034 1928072 . + . ID=Thaps3840.4;Parent=Thaps3840;constitutive=1;rank=4 chr3 ensembl protein_coding_gene 1929767 1932345 . + . ID=Thaps3842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYX9];external_name=Thaps3842;logic_name=jgi_thaps3 chr3 ensembl transcript 1929767 1932345 . + . ID=Thaps3842;Parent=Thaps3842;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1929767 1930903 . + 0 ID=Thaps3842;Parent=Thaps3842;rank=1 chr3 . exon 1929767 1930903 . + . ID=Thaps3842.1;Parent=Thaps3842;constitutive=1;rank=1 chr3 . CDS 1930984 1931582 . + 0 ID=Thaps3842;Parent=Thaps3842;rank=2 chr3 . exon 1930984 1931582 . + . ID=Thaps3842.2;Parent=Thaps3842;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1931721 1932345 . + 0 ID=Thaps3842;Parent=Thaps3842;rank=3 chr3 . exon 1931721 1932345 . + . ID=Thaps3842.3;Parent=Thaps3842;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 1932442 1935345 . - . ID=Thaps21958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYY0];external_name=Thaps21958;logic_name=jgi_thaps3 chr3 ensembl transcript 1932442 1935345 . - . ID=Thaps21958;Parent=Thaps21958;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1932442 1935345 . - 0 ID=Thaps21958;Parent=Thaps21958;rank=1 chr3 . exon 1932442 1935345 . - . ID=Thaps21958.1;Parent=Thaps21958;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1935580 1937343 . + . ID=Thaps21959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYY1];external_name=Thaps21959;logic_name=jgi_thaps3 chr3 ensembl transcript 1935580 1937343 . + . ID=Thaps21959;Parent=Thaps21959;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1935580 1937343 . + 0 ID=Thaps21959;Parent=Thaps21959;rank=1 chr3 . exon 1935580 1937343 . + . ID=Thaps21959.1;Parent=Thaps21959;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1941685 1943800 . + . ID=Thaps268550;biotype=protein_coding;description=Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BYY3];external_name=ALD1;logic_name=jgi_thaps3 chr3 ensembl transcript 1941685 1943800 . + . ID=Thaps268550;Parent=Thaps268550;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1941685 1941901 . + 0 ID=Thaps268550;Parent=Thaps268550;rank=1 chr3 . exon 1941685 1941901 . + . ID=Thaps268550.1;Parent=Thaps268550;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1942044 1942251 . + 0 ID=Thaps268550;Parent=Thaps268550;rank=2 chr3 . exon 1942044 1942251 . + . ID=Thaps268550.2;Parent=Thaps268550;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1942339 1942661 . + 0 ID=Thaps268550;Parent=Thaps268550;rank=3 chr3 . CDS 1942748 1943190 . + 0 ID=Thaps268550;Parent=Thaps268550;rank=4 chr3 . CDS 1943283 1943313 . + 0 ID=Thaps268550;Parent=Thaps268550;rank=5 chr3 . CDS 1943385 1943550 . + 0 ID=Thaps268550;Parent=Thaps268550;rank=6 chr3 . CDS 1943626 1943800 . + 0 ID=Thaps268550;Parent=Thaps268550;rank=7 chr3 ensembl protein_coding_gene 1937376 1939074 . - . ID=Thaps3845;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYY2];external_name=Thaps3845;logic_name=jgi_thaps3 chr3 ensembl transcript 1937376 1939074 . - . ID=Thaps3845;Parent=Thaps3845;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1937376 1937412 . - 0 ID=Thaps3845;Parent=Thaps3845;rank=2 chr3 . exon 1937376 1937412 . - . ID=Thaps3845.2;Parent=Thaps3845;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1937435 1939074 . - 0 ID=Thaps3845;Parent=Thaps3845;rank=1 chr3 . exon 1937435 1939074 . - . ID=Thaps3845.1;Parent=Thaps3845;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . repeat_region 1946230 1946237 . ? . description=dust chr3 . repeat_region 1948885 1948920 . ? . description=dust chr3 ensembl protein_coding_gene 1945006 1945637 . - . ID=Thaps261924;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYY4];external_name=Thaps261924;logic_name=jgi_thaps3 chr3 ensembl transcript 1945006 1945637 . - . ID=Thaps261924;Parent=Thaps261924;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1945006 1945319 . - 0 ID=Thaps261924;Parent=Thaps261924;rank=2 chr3 . exon 1945006 1945319 . - . ID=Thaps261924.2;Parent=Thaps261924;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1945371 1945637 . - 0 ID=Thaps261924;Parent=Thaps261924;rank=1 chr3 . exon 1945371 1945637 . - . ID=Thaps261924.1;Parent=Thaps261924;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1947700 1948620 . - . ID=Thaps261925;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYY6];external_name=Thaps261925;logic_name=jgi_thaps3 chr3 ensembl transcript 1947700 1948620 . - . ID=Thaps261925;Parent=Thaps261925;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1947700 1948388 . - 0 ID=Thaps261925;Parent=Thaps261925;rank=2 chr3 . exon 1947700 1948388 . - . ID=Thaps261925.2;Parent=Thaps261925;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1948488 1948620 . - 0 ID=Thaps261925;Parent=Thaps261925;rank=1 chr3 . exon 1948488 1948620 . - . ID=Thaps261925.1;Parent=Thaps261925;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . exon 1942339 1942661 . + . ID=Thaps268550.3;Parent=Thaps268550;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . exon 1942748 1943190 . + . ID=Thaps268550.4;Parent=Thaps268550;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . exon 1943283 1943313 . + . ID=Thaps268550.5;Parent=Thaps268550;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . exon 1943385 1943550 . + . ID=Thaps268550.6;Parent=Thaps268550;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . exon 1943626 1943800 . + . ID=Thaps268550.7;Parent=Thaps268550;constitutive=1;ensembl_end_phase=1;rank=7 chr3 ensembl protein_coding_gene 1946434 1947512 . + . ID=Thaps3848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYY5];external_name=Thaps3848;logic_name=jgi_thaps3 chr3 ensembl transcript 1946434 1947512 . + . ID=Thaps3848;Parent=Thaps3848;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1946434 1946602 . + 0 ID=Thaps3848;Parent=Thaps3848;rank=1 chr3 . exon 1946434 1946602 . + . ID=Thaps3848.1;Parent=Thaps3848;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 1946710 1946859 . + 0 ID=Thaps3848;Parent=Thaps3848;rank=2 chr3 . exon 1946710 1946859 . + . ID=Thaps3848.2;Parent=Thaps3848;constitutive=1;rank=2 chr3 . CDS 1946950 1947512 . + 0 ID=Thaps3848;Parent=Thaps3848;rank=3 chr3 . exon 1946950 1947512 . + . ID=Thaps3848.3;Parent=Thaps3848;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 1950529 1955015 . + . ID=Thaps3850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYY7];external_name=Thaps3850;logic_name=jgi_thaps3 chr3 ensembl transcript 1950529 1955015 . + . ID=Thaps3850;Parent=Thaps3850;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1950529 1950801 . + 0 ID=Thaps3850;Parent=Thaps3850;rank=1 chr3 . exon 1950529 1950801 . + . ID=Thaps3850.1;Parent=Thaps3850;constitutive=1;rank=1 chr3 . CDS 1950895 1953905 . + 0 ID=Thaps3850;Parent=Thaps3850;rank=2 chr3 . exon 1950895 1953905 . + . ID=Thaps3850.2;Parent=Thaps3850;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1954062 1954924 . + 0 ID=Thaps3850;Parent=Thaps3850;rank=3 chr3 . CDS 1954987 1955015 . + 0 ID=Thaps3850;Parent=Thaps3850;rank=4 chr3 . repeat_region 1955736 1955758 . ? . description=trf chr3 ensembl protein_coding_gene 1955181 1956683 . - . ID=Thaps21963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BYY8];external_name=Thaps21963;logic_name=jgi_thaps3 chr3 ensembl transcript 1955181 1956683 . - . ID=Thaps21963;Parent=Thaps21963;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1955181 1955327 . - 0 ID=Thaps21963;Parent=Thaps21963;rank=2 chr3 . exon 1955181 1955327 . - . ID=Thaps21963.2;Parent=Thaps21963;constitutive=1;rank=2 chr3 . CDS 1955382 1956683 . - 0 ID=Thaps21963;Parent=Thaps21963;rank=1 chr3 . exon 1955382 1956683 . - . ID=Thaps21963.1;Parent=Thaps21963;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1957243 1958439 . + . ID=Thaps32840;biotype=protein_coding;description=Kinesin motor protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW53];external_name=Thaps32840;logic_name=jgi_thaps3 chr3 ensembl transcript 1957243 1958439 . + . ID=Thaps32840;Parent=Thaps32840;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1957243 1957428 . + 0 ID=Thaps32840;Parent=Thaps32840;rank=1 chr3 . exon 1957243 1957428 . + . ID=Thaps32840.1;Parent=Thaps32840;constitutive=1;rank=1 chr3 . CDS 1957480 1957919 . + 0 ID=Thaps32840;Parent=Thaps32840;rank=2 chr3 . exon 1957480 1957919 . + . ID=Thaps32840.2;Parent=Thaps32840;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1958025 1958439 . + 0 ID=Thaps32840;Parent=Thaps32840;rank=3 chr3 . exon 1958025 1958439 . + . ID=Thaps32840.3;Parent=Thaps32840;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 1954062 1954924 . + . ID=Thaps3850.3;Parent=Thaps3850;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . exon 1954987 1955015 . + . ID=Thaps3850.4;Parent=Thaps3850;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 1970876 1971499 . - . ID=Thaps21965;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW56];external_name=Thaps21965;logic_name=jgi_thaps3 chr3 ensembl transcript 1970876 1971499 . - . ID=Thaps21965;Parent=Thaps21965;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1970876 1971499 . - 0 ID=Thaps21965;Parent=Thaps21965;rank=1 chr3 . exon 1970876 1971499 . - . ID=Thaps21965.1;Parent=Thaps21965;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1962973 1966917 . - . ID=Thaps3853;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW54];external_name=Thaps3853;logic_name=jgi_thaps3 chr3 ensembl transcript 1962973 1966917 . - . ID=Thaps3853;Parent=Thaps3853;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1962973 1964073 . - 0 ID=Thaps3853;Parent=Thaps3853;rank=2 chr3 . exon 1962973 1964073 . - . ID=Thaps3853.2;Parent=Thaps3853;constitutive=1;rank=2 chr3 . CDS 1964266 1966917 . - 0 ID=Thaps3853;Parent=Thaps3853;rank=1 chr3 . exon 1964266 1966917 . - . ID=Thaps3853.1;Parent=Thaps3853;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1967909 1969085 . - . ID=Thaps3854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW55];external_name=Thaps3854;logic_name=jgi_thaps3 chr3 ensembl transcript 1967909 1969085 . - . ID=Thaps3854;Parent=Thaps3854;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1967909 1968773 . - 0 ID=Thaps3854;Parent=Thaps3854;rank=2 chr3 . exon 1967909 1968773 . - . ID=Thaps3854.2;Parent=Thaps3854;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1968856 1969085 . - 0 ID=Thaps3854;Parent=Thaps3854;rank=1 chr3 . exon 1968856 1969085 . - . ID=Thaps3854.1;Parent=Thaps3854;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . repeat_region 1973533 1973540 . ? . description=dust chr3 . repeat_region 1978739 1978759 . ? . description=trf chr3 . repeat_region 1978739 1978759 . ? . description=dust chr3 . repeat_region 1980948 1980991 . ? . description=trf chr3 ensembl protein_coding_gene 1976411 1977070 . + . ID=Thaps21966;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW59];external_name=Thaps21966;logic_name=jgi_thaps3 chr3 ensembl transcript 1976411 1977070 . + . ID=Thaps21966;Parent=Thaps21966;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1976411 1977070 . + 0 ID=Thaps21966;Parent=Thaps21966;rank=1 chr3 . exon 1976411 1977070 . + . ID=Thaps21966.1;Parent=Thaps21966;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1977859 1979622 . - . ID=Thaps21967;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW60];external_name=Thaps21967;logic_name=jgi_thaps3 chr3 ensembl transcript 1977859 1979622 . - . ID=Thaps21967;Parent=Thaps21967;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1977859 1978338 . - 0 ID=Thaps21967;Parent=Thaps21967;rank=2 chr3 . exon 1977859 1978338 . - . ID=Thaps21967.2;Parent=Thaps21967;constitutive=1;rank=2 chr3 . CDS 1978456 1979622 . - 0 ID=Thaps21967;Parent=Thaps21967;rank=1 chr3 . exon 1978456 1979622 . - . ID=Thaps21967.1;Parent=Thaps21967;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1972472 1973510 . - . ID=Thaps32876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW57];external_name=Thaps32876;logic_name=jgi_thaps3 chr3 ensembl transcript 1972472 1973510 . - . ID=Thaps32876;Parent=Thaps32876;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1972472 1972555 . - 0 ID=Thaps32876;Parent=Thaps32876;rank=3 chr3 . exon 1972472 1972555 . - . ID=Thaps32876.3;Parent=Thaps32876;constitutive=1;rank=3 chr3 . CDS 1972645 1972919 . - 0 ID=Thaps32876;Parent=Thaps32876;rank=2 chr3 . exon 1972645 1972919 . - . ID=Thaps32876.2;Parent=Thaps32876;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1973009 1973510 . - 0 ID=Thaps32876;Parent=Thaps32876;rank=1 chr3 . exon 1973009 1973510 . - . ID=Thaps32876.1;Parent=Thaps32876;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1974630 1976121 . - . ID=Thaps3858;biotype=protein_coding;description=Elongation factor 1-alpha [Source:UniProtKB/TrEMBL%3BAcc:B8BW58];external_name=Thaps3858;logic_name=jgi_thaps3 chr3 ensembl transcript 1974630 1976121 . - . ID=Thaps3858;Parent=Thaps3858;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1974630 1975235 . - 0 ID=Thaps3858;Parent=Thaps3858;rank=3 chr3 . exon 1974630 1975235 . - . ID=Thaps3858.3;Parent=Thaps3858;constitutive=1;rank=3 chr3 . CDS 1975329 1975978 . - 0 ID=Thaps3858;Parent=Thaps3858;rank=2 chr3 . exon 1975329 1975978 . - . ID=Thaps3858.2;Parent=Thaps3858;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1976067 1976121 . - 0 ID=Thaps3858;Parent=Thaps3858;rank=1 chr3 . exon 1976067 1976121 . - . ID=Thaps3858.1;Parent=Thaps3858;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1980235 1982665 . + . ID=Thaps3861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW61];external_name=Thaps3861;logic_name=jgi_thaps3 chr3 ensembl transcript 1980235 1982665 . + . ID=Thaps3861;Parent=Thaps3861;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1980235 1980396 . + 0 ID=Thaps3861;Parent=Thaps3861;rank=1 chr3 . exon 1980235 1980396 . + . ID=Thaps3861.1;Parent=Thaps3861;constitutive=1;rank=1 chr3 . CDS 1980583 1981484 . + 0 ID=Thaps3861;Parent=Thaps3861;rank=2 chr3 . exon 1980583 1981484 . + . ID=Thaps3861.2;Parent=Thaps3861;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 1981683 1981758 . + 0 ID=Thaps3861;Parent=Thaps3861;rank=3 chr3 . exon 1981683 1981758 . + . ID=Thaps3861.3;Parent=Thaps3861;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 1981850 1981873 . + 0 ID=Thaps3861;Parent=Thaps3861;rank=4 chr3 . exon 1981850 1981873 . + . ID=Thaps3861.4;Parent=Thaps3861;constitutive=1;rank=4 chr3 . CDS 1981974 1982037 . + 0 ID=Thaps3861;Parent=Thaps3861;rank=5 chr3 . exon 1981974 1982037 . + . ID=Thaps3861.5;Parent=Thaps3861;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 1982126 1982146 . + 0 ID=Thaps3861;Parent=Thaps3861;rank=6 chr3 . CDS 1982293 1982316 . + 0 ID=Thaps3861;Parent=Thaps3861;rank=7 chr3 . CDS 1982358 1982491 . + 0 ID=Thaps3861;Parent=Thaps3861;rank=8 chr3 . CDS 1982639 1982665 . + 0 ID=Thaps3861;Parent=Thaps3861;rank=9 chr3 ensembl protein_coding_gene 1985500 1989100 . - . ID=Thaps21968;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW63];external_name=Thaps21968;logic_name=jgi_thaps3 chr3 ensembl transcript 1985500 1989100 . - . ID=Thaps21968;Parent=Thaps21968;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1985500 1986053 . - 0 ID=Thaps21968;Parent=Thaps21968;rank=5 chr3 . exon 1985500 1986053 . - . ID=Thaps21968.5;Parent=Thaps21968;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 1986090 1986229 . - 0 ID=Thaps21968;Parent=Thaps21968;rank=4 chr3 . exon 1986090 1986229 . - . ID=Thaps21968.4;Parent=Thaps21968;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 1986411 1986590 . - 0 ID=Thaps21968;Parent=Thaps21968;rank=3 chr3 . exon 1986411 1986590 . - . ID=Thaps21968.3;Parent=Thaps21968;constitutive=1;rank=3 chr3 . CDS 1986622 1988524 . - 0 ID=Thaps21968;Parent=Thaps21968;rank=2 chr3 . exon 1986622 1988524 . - . ID=Thaps21968.2;Parent=Thaps21968;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 1988551 1989100 . - 0 ID=Thaps21968;Parent=Thaps21968;rank=1 chr3 . exon 1988551 1989100 . - . ID=Thaps21968.1;Parent=Thaps21968;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 1984497 1985342 . + . ID=Thaps268551;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW62];external_name=Thaps268551;logic_name=jgi_thaps3 chr3 ensembl transcript 1984497 1985342 . + . ID=Thaps268551;Parent=Thaps268551;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1984497 1984574 . + 0 ID=Thaps268551;Parent=Thaps268551;rank=1 chr3 . exon 1984497 1984574 . + . ID=Thaps268551.1;Parent=Thaps268551;constitutive=1;rank=1 chr3 . CDS 1984656 1984811 . + 0 ID=Thaps268551;Parent=Thaps268551;rank=2 chr3 . exon 1984656 1984811 . + . ID=Thaps268551.2;Parent=Thaps268551;constitutive=1;rank=2 chr3 . CDS 1984956 1985003 . + 0 ID=Thaps268551;Parent=Thaps268551;rank=3 chr3 . exon 1984956 1985003 . + . ID=Thaps268551.3;Parent=Thaps268551;constitutive=1;rank=3 chr3 . CDS 1985082 1985342 . + 0 ID=Thaps268551;Parent=Thaps268551;rank=4 chr3 . exon 1985082 1985342 . + . ID=Thaps268551.4;Parent=Thaps268551;constitutive=1;rank=4 chr3 . exon 1982126 1982146 . + . ID=Thaps3861.6;Parent=Thaps3861;constitutive=1;rank=6 chr3 . exon 1982293 1982316 . + . ID=Thaps3861.7;Parent=Thaps3861;constitutive=1;rank=7 chr3 . exon 1982358 1982491 . + . ID=Thaps3861.8;Parent=Thaps3861;constitutive=1;ensembl_end_phase=2;rank=8 chr3 . exon 1982639 1982665 . + . ID=Thaps3861.9;Parent=Thaps3861;constitutive=1;rank=9 chr3 ensembl protein_coding_gene 1989437 1991103 . + . ID=Thaps3863;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW64];external_name=Thaps3863;logic_name=jgi_thaps3 chr3 ensembl transcript 1989437 1991103 . + . ID=Thaps3863;Parent=Thaps3863;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1989437 1989918 . + 0 ID=Thaps3863;Parent=Thaps3863;rank=1 chr3 . exon 1989437 1989918 . + . ID=Thaps3863.1;Parent=Thaps3863;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 1990005 1991103 . + 0 ID=Thaps3863;Parent=Thaps3863;rank=2 chr3 . exon 1990005 1991103 . + . ID=Thaps3863.2;Parent=Thaps3863;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 1991998 1992978 . + . ID=Thaps40073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW65];external_name=Thaps40073;logic_name=jgi_thaps3 chr3 ensembl transcript 1991998 1992978 . + . ID=Thaps40073;Parent=Thaps40073;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1991998 1992978 . + 0 ID=Thaps40073;Parent=Thaps40073;rank=1 chr3 . exon 1991998 1992978 . + . ID=Thaps40073.1;Parent=Thaps40073;constitutive=1;rank=1 chr3 . repeat_region 2001245 2001253 . ? . description=dust chr3 ensembl protein_coding_gene 1993417 1994763 . + . ID=Thaps33008;biotype=protein_coding;description=3-phosphoshikimate 1-carboxyvinyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BW66];external_name=Thaps33008;logic_name=jgi_thaps3 chr3 ensembl transcript 1993417 1994763 . + . ID=Thaps33008;Parent=Thaps33008;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1993417 1994763 . + 0 ID=Thaps33008;Parent=Thaps33008;rank=1 chr3 . exon 1993417 1994763 . + . ID=Thaps33008.1;Parent=Thaps33008;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1995221 1996852 . + . ID=Thaps3866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW67];external_name=Thaps3866;logic_name=jgi_thaps3 chr3 ensembl transcript 1995221 1996852 . + . ID=Thaps3866;Parent=Thaps3866;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1995221 1996852 . + 0 ID=Thaps3866;Parent=Thaps3866;rank=1 chr3 . exon 1995221 1996852 . + . ID=Thaps3866.1;Parent=Thaps3866;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1997390 1998856 . - . ID=Thaps3867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW68];external_name=Thaps3867;logic_name=jgi_thaps3 chr3 ensembl transcript 1997390 1998856 . - . ID=Thaps3867;Parent=Thaps3867;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1997390 1998565 . - 0 ID=Thaps3867;Parent=Thaps3867;rank=2 chr3 . exon 1997390 1998565 . - . ID=Thaps3867.2;Parent=Thaps3867;constitutive=1;rank=2 chr3 . CDS 1998626 1998856 . - 0 ID=Thaps3867;Parent=Thaps3867;rank=1 chr3 . exon 1998626 1998856 . - . ID=Thaps3867.1;Parent=Thaps3867;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 1999361 2000257 . + . ID=Thaps3868;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW69];external_name=Thaps3868;logic_name=jgi_thaps3 chr3 ensembl transcript 1999361 2000257 . + . ID=Thaps3868;Parent=Thaps3868;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 1999361 2000257 . + 0 ID=Thaps3868;Parent=Thaps3868;rank=1 chr3 . exon 1999361 2000257 . + . ID=Thaps3868.1;Parent=Thaps3868;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2000502 2001234 . - . ID=Thaps3869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW70];external_name=Thaps3869;logic_name=jgi_thaps3 chr3 ensembl transcript 2000502 2001234 . - . ID=Thaps3869;Parent=Thaps3869;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2000502 2000654 . - 0 ID=Thaps3869;Parent=Thaps3869;rank=3 chr3 . exon 2000502 2000654 . - . ID=Thaps3869.3;Parent=Thaps3869;constitutive=1;rank=3 chr3 . CDS 2000746 2000988 . - 0 ID=Thaps3869;Parent=Thaps3869;rank=2 chr3 . exon 2000746 2000988 . - . ID=Thaps3869.2;Parent=Thaps3869;constitutive=1;rank=2 chr3 . CDS 2001088 2001234 . - 0 ID=Thaps3869;Parent=Thaps3869;rank=1 chr3 . exon 2001088 2001234 . - . ID=Thaps3869.1;Parent=Thaps3869;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2001523 2002743 . + . ID=Thaps3870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW71];external_name=Thaps3870;logic_name=jgi_thaps3 chr3 ensembl transcript 2001523 2002743 . + . ID=Thaps3870;Parent=Thaps3870;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2001523 2001670 . + 0 ID=Thaps3870;Parent=Thaps3870;rank=1 chr3 . exon 2001523 2001670 . + . ID=Thaps3870.1;Parent=Thaps3870;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2001776 2002743 . + 0 ID=Thaps3870;Parent=Thaps3870;rank=2 chr3 . exon 2001776 2002743 . + . ID=Thaps3870.2;Parent=Thaps3870;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . repeat_region 2009019 2009045 . ? . description=trf chr3 ensembl protein_coding_gene 2005814 2007148 . + . ID=Thaps21971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW73];external_name=Thaps21971;logic_name=jgi_thaps3 chr3 ensembl transcript 2005814 2007148 . + . ID=Thaps21971;Parent=Thaps21971;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2005814 2005924 . + 0 ID=Thaps21971;Parent=Thaps21971;rank=1 chr3 . exon 2005814 2005924 . + . ID=Thaps21971.1;Parent=Thaps21971;constitutive=1;rank=1 chr3 . CDS 2006012 2006471 . + 0 ID=Thaps21971;Parent=Thaps21971;rank=2 chr3 . exon 2006012 2006471 . + . ID=Thaps21971.2;Parent=Thaps21971;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2006688 2007148 . + 0 ID=Thaps21971;Parent=Thaps21971;rank=3 chr3 . exon 2006688 2007148 . + . ID=Thaps21971.3;Parent=Thaps21971;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 2008118 2009471 . + . ID=Thaps21972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW74];external_name=Thaps21972;logic_name=jgi_thaps3 chr3 ensembl transcript 2008118 2009471 . + . ID=Thaps21972;Parent=Thaps21972;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2008118 2008292 . + 0 ID=Thaps21972;Parent=Thaps21972;rank=1 chr3 . exon 2008118 2008292 . + . ID=Thaps21972.1;Parent=Thaps21972;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2008442 2008731 . + 0 ID=Thaps21972;Parent=Thaps21972;rank=2 chr3 . exon 2008442 2008731 . + . ID=Thaps21972.2;Parent=Thaps21972;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2008824 2009471 . + 0 ID=Thaps21972;Parent=Thaps21972;rank=3 chr3 . exon 2008824 2009471 . + . ID=Thaps21972.3;Parent=Thaps21972;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 2002794 2004629 . - . ID=Thaps268552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW72];external_name=Thaps268552;logic_name=jgi_thaps3 chr3 ensembl transcript 2002794 2004629 . - . ID=Thaps268552;Parent=Thaps268552;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2002794 2004629 . - 0 ID=Thaps268552;Parent=Thaps268552;rank=1 chr3 . exon 2002794 2004629 . - . ID=Thaps268552.1;Parent=Thaps268552;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2010073 2011921 . + . ID=Thaps3874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW75];external_name=Thaps3874;logic_name=jgi_thaps3 chr3 ensembl transcript 2010073 2011921 . + . ID=Thaps3874;Parent=Thaps3874;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2010073 2011224 . + 0 ID=Thaps3874;Parent=Thaps3874;rank=1 chr3 . exon 2010073 2011224 . + . ID=Thaps3874.1;Parent=Thaps3874;constitutive=1;rank=1 chr3 . CDS 2011298 2011921 . + 0 ID=Thaps3874;Parent=Thaps3874;rank=2 chr3 . exon 2011298 2011921 . + . ID=Thaps3874.2;Parent=Thaps3874;constitutive=1;rank=2 chr3 . repeat_region 2013405 2013453 . ? . description=dust chr3 . repeat_region 2016868 2016881 . ? . description=dust chr3 . biological_region 2017388 2017390 0.999 - . logic_name=eponine chr3 ensembl protein_coding_gene 2013402 2014325 . - . ID=Thaps21973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW76];external_name=Thaps21973;logic_name=jgi_thaps3 chr3 ensembl transcript 2013402 2014325 . - . ID=Thaps21973;Parent=Thaps21973;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2013402 2014325 . - 0 ID=Thaps21973;Parent=Thaps21973;rank=1 chr3 . exon 2013402 2014325 . - . ID=Thaps21973.1;Parent=Thaps21973;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2016881 2017261 . - . ID=Thaps261932;biotype=protein_coding;description=Receiver domain of response regulator from bacterial two component system [Source:UniProtKB/TrEMBL%3BAcc:B8BW78];external_name=Thaps261932;logic_name=jgi_thaps3 chr3 ensembl transcript 2016881 2017261 . - . ID=Thaps261932;Parent=Thaps261932;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2016881 2017261 . - 0 ID=Thaps261932;Parent=Thaps261932;rank=1 chr3 . exon 2016881 2017261 . - . ID=Thaps261932.1;Parent=Thaps261932;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2014600 2016693 . + . ID=Thaps3876;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW77];external_name=Thaps3876;logic_name=jgi_thaps3 chr3 ensembl transcript 2014600 2016693 . + . ID=Thaps3876;Parent=Thaps3876;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2014600 2016693 . + 0 ID=Thaps3876;Parent=Thaps3876;rank=1 chr3 . exon 2014600 2016693 . + . ID=Thaps3876.1;Parent=Thaps3876;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2019971 2020764 . + . ID=Thaps3878;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BW79];external_name=PPI2;logic_name=jgi_thaps3 chr3 ensembl transcript 2019971 2020764 . + . ID=Thaps3878;Parent=Thaps3878;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2019971 2019990 . + 0 ID=Thaps3878;Parent=Thaps3878;rank=1 chr3 . exon 2019971 2019990 . + . ID=Thaps3878.1;Parent=Thaps3878;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2020138 2020442 . + 0 ID=Thaps3878;Parent=Thaps3878;rank=2 chr3 . exon 2020138 2020442 . + . ID=Thaps3878.2;Parent=Thaps3878;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2020547 2020764 . + 0 ID=Thaps3878;Parent=Thaps3878;rank=3 chr3 . exon 2020547 2020764 . + . ID=Thaps3878.3;Parent=Thaps3878;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 2020915 2022258 . - . ID=Thaps3879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW80];external_name=Thaps3879;logic_name=jgi_thaps3 chr3 ensembl transcript 2020915 2022258 . - . ID=Thaps3879;Parent=Thaps3879;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2020915 2022258 . - 0 ID=Thaps3879;Parent=Thaps3879;rank=1 chr3 . exon 2020915 2022258 . - . ID=Thaps3879.1;Parent=Thaps3879;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2024987 2032050 . - . ID=Thaps268553;biotype=protein_coding;description=DNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8BW81];external_name=Thaps268553;logic_name=jgi_thaps3 chr3 ensembl transcript 2024987 2032050 . - . ID=Thaps268553;Parent=Thaps268553;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2024987 2025289 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=10 chr3 . exon 2024987 2025289 . - . ID=Thaps268553.10;Parent=Thaps268553;constitutive=1;rank=10 chr3 . CDS 2025376 2026160 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=9 chr3 . exon 2025376 2026160 . - . ID=Thaps268553.9;Parent=Thaps268553;constitutive=1;ensembl_end_phase=2;rank=9 chr3 . CDS 2026194 2026811 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=8 chr3 . exon 2026194 2026811 . - . ID=Thaps268553.8;Parent=Thaps268553;constitutive=1;rank=8 chr3 . CDS 2026851 2027270 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=7 chr3 . exon 2026851 2027270 . - . ID=Thaps268553.7;Parent=Thaps268553;constitutive=1;rank=7 chr3 . CDS 2027427 2027693 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=6 chr3 . exon 2027427 2027693 . - . ID=Thaps268553.6;Parent=Thaps268553;constitutive=1;rank=6 chr3 . CDS 2027706 2027871 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=5 chr3 . exon 2027706 2027871 . - . ID=Thaps268553.5;Parent=Thaps268553;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 2027929 2028401 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=4 chr3 . exon 2027929 2028401 . - . ID=Thaps268553.4;Parent=Thaps268553;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 2028447 2030361 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=3 chr3 . exon 2028447 2030361 . - . ID=Thaps268553.3;Parent=Thaps268553;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 2030449 2030750 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=2 chr3 . exon 2030449 2030750 . - . ID=Thaps268553.2;Parent=Thaps268553;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2030835 2032050 . - 0 ID=Thaps268553;Parent=Thaps268553;rank=1 chr3 . exon 2030835 2032050 . - . ID=Thaps268553.1;Parent=Thaps268553;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 2039513 2039520 . ? . description=dust chr3 ensembl protein_coding_gene 2041166 2043086 . - . ID=Thaps21976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW86];external_name=Thaps21976;logic_name=jgi_thaps3 chr3 ensembl transcript 2041166 2043086 . - . ID=Thaps21976;Parent=Thaps21976;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2041166 2042206 . - 0 ID=Thaps21976;Parent=Thaps21976;rank=2 chr3 . exon 2041166 2042206 . - . ID=Thaps21976.2;Parent=Thaps21976;constitutive=1;rank=2 chr3 . CDS 2042274 2043086 . - 0 ID=Thaps21976;Parent=Thaps21976;rank=1 chr3 ensembl protein_coding_gene 2040114 2040397 . + . ID=Thaps261935;biotype=protein_coding;description=Thioredoxin [Source:UniProtKB/TrEMBL%3BAcc:B8BW85];external_name=Thaps261935;logic_name=jgi_thaps3 chr3 ensembl transcript 2040114 2040397 . + . ID=Thaps261935;Parent=Thaps261935;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2040114 2040397 . + 0 ID=Thaps261935;Parent=Thaps261935;rank=1 chr3 . exon 2040114 2040397 . + . ID=Thaps261935.1;Parent=Thaps261935;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2034002 2035414 . - . ID=Thaps3882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW82];external_name=Thaps3882;logic_name=jgi_thaps3 chr3 ensembl transcript 2034002 2035414 . - . ID=Thaps3882;Parent=Thaps3882;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2034002 2035414 . - 0 ID=Thaps3882;Parent=Thaps3882;rank=1 chr3 . exon 2034002 2035414 . - . ID=Thaps3882.1;Parent=Thaps3882;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2036830 2037933 . - . ID=Thaps3883;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW83];external_name=Thaps3883;logic_name=jgi_thaps3 chr3 ensembl transcript 2036830 2037933 . - . ID=Thaps3883;Parent=Thaps3883;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2036830 2037933 . - 0 ID=Thaps3883;Parent=Thaps3883;rank=1 chr3 . exon 2036830 2037933 . - . ID=Thaps3883.1;Parent=Thaps3883;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2038700 2039437 . - . ID=Thaps3884;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW84];external_name=Thaps3884;logic_name=jgi_thaps3 chr3 ensembl transcript 2038700 2039437 . - . ID=Thaps3884;Parent=Thaps3884;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2038700 2039437 . - 0 ID=Thaps3884;Parent=Thaps3884;rank=1 chr3 . exon 2038700 2039437 . - . ID=Thaps3884.1;Parent=Thaps3884;constitutive=1;rank=1 chr3 . repeat_region 2042342 2042387 . ? . description=trf chr3 ensembl protein_coding_gene 2046260 2047162 . - . ID=Thaps17214;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW88];external_name=Thaps17214;logic_name=jgi_thaps3 chr3 ensembl transcript 2046260 2047162 . - . ID=Thaps17214;Parent=Thaps17214;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2046260 2046378 . - 0 ID=Thaps17214;Parent=Thaps17214;rank=2 chr3 . exon 2046260 2046378 . - . ID=Thaps17214.2;Parent=Thaps17214;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2046466 2047162 . - 0 ID=Thaps17214;Parent=Thaps17214;rank=1 chr3 . exon 2046466 2047162 . - . ID=Thaps17214.1;Parent=Thaps17214;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . exon 2042274 2043086 . - . ID=Thaps21976.1;Parent=Thaps21976;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2044146 2046034 . + . ID=Thaps21977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW87];external_name=Thaps21977;logic_name=jgi_thaps3 chr3 ensembl transcript 2044146 2046034 . + . ID=Thaps21977;Parent=Thaps21977;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2044146 2044294 . + 0 ID=Thaps21977;Parent=Thaps21977;rank=1 chr3 . exon 2044146 2044294 . + . ID=Thaps21977.1;Parent=Thaps21977;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2044390 2046034 . + 0 ID=Thaps21977;Parent=Thaps21977;rank=2 chr3 . exon 2044390 2046034 . + . ID=Thaps21977.2;Parent=Thaps21977;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 2048903 2050293 . + . ID=Thaps261937;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW89];external_name=Thaps261937;logic_name=jgi_thaps3 chr3 ensembl transcript 2048903 2050293 . + . ID=Thaps261937;Parent=Thaps261937;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2048903 2049036 . + 0 ID=Thaps261937;Parent=Thaps261937;rank=1 chr3 . exon 2048903 2049036 . + . ID=Thaps261937.1;Parent=Thaps261937;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2049238 2049798 . + 0 ID=Thaps261937;Parent=Thaps261937;rank=2 chr3 . exon 2049238 2049798 . + . ID=Thaps261937.2;Parent=Thaps261937;constitutive=1;rank=2 chr3 . CDS 2050009 2050293 . + 0 ID=Thaps261937;Parent=Thaps261937;rank=3 chr3 . exon 2050009 2050293 . + . ID=Thaps261937.3;Parent=Thaps261937;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 2050687 2051892 . + . ID=Thaps3890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW90];external_name=Thaps3890;logic_name=jgi_thaps3 chr3 ensembl transcript 2050687 2051892 . + . ID=Thaps3890;Parent=Thaps3890;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2050687 2051892 . + 0 ID=Thaps3890;Parent=Thaps3890;rank=1 chr3 . exon 2050687 2051892 . + . ID=Thaps3890.1;Parent=Thaps3890;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2052086 2052832 . - . ID=Thaps21979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW91];external_name=Thaps21979;logic_name=jgi_thaps3 chr3 ensembl transcript 2052086 2052832 . - . ID=Thaps21979;Parent=Thaps21979;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2052086 2052832 . - 0 ID=Thaps21979;Parent=Thaps21979;rank=1 chr3 . exon 2052086 2052832 . - . ID=Thaps21979.1;Parent=Thaps21979;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2058685 2060269 . - . ID=Thaps33039;biotype=protein_coding;description=GTP pyrophosphokinase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW94];external_name=Thaps33039;logic_name=jgi_thaps3 chr3 ensembl transcript 2058685 2060269 . - . ID=Thaps33039;Parent=Thaps33039;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2058685 2059248 . - 0 ID=Thaps33039;Parent=Thaps33039;rank=2 chr3 . exon 2058685 2059248 . - . ID=Thaps33039.2;Parent=Thaps33039;constitutive=1;rank=2 chr3 . CDS 2059319 2060269 . - 0 ID=Thaps33039;Parent=Thaps33039;rank=1 chr3 . exon 2059319 2060269 . - . ID=Thaps33039.1;Parent=Thaps33039;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2053380 2054627 . + . ID=Thaps354;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW92];external_name=Thaps354;logic_name=jgi_thaps3 chr3 ensembl transcript 2053380 2054627 . + . ID=Thaps354;Parent=Thaps354;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2053380 2053853 . + 0 ID=Thaps354;Parent=Thaps354;rank=1 chr3 . exon 2053380 2053853 . + . ID=Thaps354.1;Parent=Thaps354;constitutive=1;rank=1 chr3 . CDS 2053992 2054627 . + 0 ID=Thaps354;Parent=Thaps354;rank=2 chr3 . exon 2053992 2054627 . + . ID=Thaps354.2;Parent=Thaps354;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2055004 2057295 . + . ID=Thaps3893;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW93];external_name=Thaps3893;logic_name=jgi_thaps3 chr3 ensembl transcript 2055004 2057295 . + . ID=Thaps3893;Parent=Thaps3893;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2055004 2055787 . + 0 ID=Thaps3893;Parent=Thaps3893;rank=1 chr3 . exon 2055004 2055787 . + . ID=Thaps3893.1;Parent=Thaps3893;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2055870 2055987 . + 0 ID=Thaps3893;Parent=Thaps3893;rank=2 chr3 . exon 2055870 2055987 . + . ID=Thaps3893.2;Parent=Thaps3893;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2056071 2057295 . + 0 ID=Thaps3893;Parent=Thaps3893;rank=3 chr3 . exon 2056071 2057295 . + . ID=Thaps3893.3;Parent=Thaps3893;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 2061181 2061930 . + . ID=Thaps3895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW95];external_name=Thaps3895;logic_name=jgi_thaps3 chr3 ensembl transcript 2061181 2061930 . + . ID=Thaps3895;Parent=Thaps3895;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2061181 2061930 . + 0 ID=Thaps3895;Parent=Thaps3895;rank=1 chr3 . exon 2061181 2061930 . + . ID=Thaps3895.1;Parent=Thaps3895;constitutive=1;rank=1 chr3 . repeat_region 2067320 2067340 . ? . description=trf chr3 . repeat_region 2067320 2067340 . ? . description=dust chr3 . repeat_region 2067519 2067557 . ? . description=trf chr3 ensembl protein_coding_gene 2070680 2075954 . - . ID=Thaps21983;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW99];external_name=Thaps21983;logic_name=jgi_thaps3 chr3 ensembl transcript 2070680 2075954 . - . ID=Thaps21983;Parent=Thaps21983;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2070680 2072957 . - 0 ID=Thaps21983;Parent=Thaps21983;rank=5 chr3 . exon 2070680 2072957 . - . ID=Thaps21983.5;Parent=Thaps21983;constitutive=1;ensembl_end_phase=1;rank=5 chr3 . CDS 2073075 2073153 . - 0 ID=Thaps21983;Parent=Thaps21983;rank=4 chr3 . CDS 2073257 2073458 . - 0 ID=Thaps21983;Parent=Thaps21983;rank=3 chr3 . CDS 2073551 2073992 . - 0 ID=Thaps21983;Parent=Thaps21983;rank=2 chr3 . CDS 2074240 2075954 . - 0 ID=Thaps21983;Parent=Thaps21983;rank=1 chr3 ensembl protein_coding_gene 2062042 2063794 . - . ID=Thaps261941;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW96];external_name=Thaps261941;logic_name=jgi_thaps3 chr3 ensembl transcript 2062042 2063794 . - . ID=Thaps261941;Parent=Thaps261941;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2062042 2062161 . - 0 ID=Thaps261941;Parent=Thaps261941;rank=4 chr3 . exon 2062042 2062161 . - . ID=Thaps261941.4;Parent=Thaps261941;constitutive=1;rank=4 chr3 . CDS 2062189 2063100 . - 0 ID=Thaps261941;Parent=Thaps261941;rank=3 chr3 . exon 2062189 2063100 . - . ID=Thaps261941.3;Parent=Thaps261941;constitutive=1;rank=3 chr3 . CDS 2063236 2063422 . - 0 ID=Thaps261941;Parent=Thaps261941;rank=2 chr3 . exon 2063236 2063422 . - . ID=Thaps261941.2;Parent=Thaps261941;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2063594 2063794 . - 0 ID=Thaps261941;Parent=Thaps261941;rank=1 chr3 . exon 2063594 2063794 . - . ID=Thaps261941.1;Parent=Thaps261941;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2067198 2068253 . + . ID=Thaps3897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW97];external_name=Thaps3897;logic_name=jgi_thaps3 chr3 ensembl transcript 2067198 2068253 . + . ID=Thaps3897;Parent=Thaps3897;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2067198 2068253 . + 0 ID=Thaps3897;Parent=Thaps3897;rank=1 chr3 . exon 2067198 2068253 . + . ID=Thaps3897.1;Parent=Thaps3897;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2069062 2069955 . + . ID=Thaps3898;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW98];external_name=Thaps3898;logic_name=jgi_thaps3 chr3 ensembl transcript 2069062 2069955 . + . ID=Thaps3898;Parent=Thaps3898;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2069062 2069955 . + 0 ID=Thaps3898;Parent=Thaps3898;rank=1 chr3 . exon 2069062 2069955 . + . ID=Thaps3898.1;Parent=Thaps3898;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2078086 2079087 . + . ID=Thaps16114;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWA1];external_name=Thaps16114;logic_name=jgi_thaps3 chr3 ensembl transcript 2078086 2079087 . + . ID=Thaps16114;Parent=Thaps16114;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2078086 2079087 . + 0 ID=Thaps16114;Parent=Thaps16114;rank=1 chr3 . exon 2078086 2079087 . + . ID=Thaps16114.1;Parent=Thaps16114;constitutive=1;rank=1 chr3 . exon 2073075 2073153 . - . ID=Thaps21983.4;Parent=Thaps21983;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . exon 2073257 2073458 . - . ID=Thaps21983.3;Parent=Thaps21983;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 2073551 2073992 . - . ID=Thaps21983.2;Parent=Thaps21983;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . exon 2074240 2075954 . - . ID=Thaps21983.1;Parent=Thaps21983;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2076113 2076904 . - . ID=Thaps32774;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWA0];external_name=Thaps32774;logic_name=jgi_thaps3 chr3 ensembl transcript 2076113 2076904 . - . ID=Thaps32774;Parent=Thaps32774;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2076113 2076476 . - 0 ID=Thaps32774;Parent=Thaps32774;rank=2 chr3 . exon 2076113 2076476 . - . ID=Thaps32774.2;Parent=Thaps32774;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2076516 2076904 . - 0 ID=Thaps32774;Parent=Thaps32774;rank=1 chr3 . exon 2076516 2076904 . - . ID=Thaps32774.1;Parent=Thaps32774;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2079556 2081727 . + . ID=Thaps3901;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWA2];external_name=Thaps3901;logic_name=jgi_thaps3 chr3 ensembl transcript 2079556 2081727 . + . ID=Thaps3901;Parent=Thaps3901;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2079556 2081727 . + 0 ID=Thaps3901;Parent=Thaps3901;rank=1 chr3 . exon 2079556 2081727 . + . ID=Thaps3901.1;Parent=Thaps3901;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2081937 2083777 . - . ID=Thaps21984;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWA3];external_name=Thaps21984;logic_name=jgi_thaps3 chr3 ensembl transcript 2081937 2083777 . - . ID=Thaps21984;Parent=Thaps21984;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2081937 2081944 . - 0 ID=Thaps21984;Parent=Thaps21984;rank=3 chr3 . exon 2081937 2081944 . - . ID=Thaps21984.3;Parent=Thaps21984;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2081982 2083375 . - 0 ID=Thaps21984;Parent=Thaps21984;rank=2 chr3 . exon 2081982 2083375 . - . ID=Thaps21984.2;Parent=Thaps21984;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2083479 2083777 . - 0 ID=Thaps21984;Parent=Thaps21984;rank=1 chr3 . exon 2083479 2083777 . - . ID=Thaps21984.1;Parent=Thaps21984;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2087588 2089903 . + . ID=Thaps268559;biotype=protein_coding;description=Nucleolar gtp-binding protein 1 [Source:UniProtKB/TrEMBL%3BAcc:B8BWA6];external_name=Thaps268559;logic_name=jgi_thaps3 chr3 ensembl transcript 2087588 2089903 . + . ID=Thaps268559;Parent=Thaps268559;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2087588 2087727 . + 0 ID=Thaps268559;Parent=Thaps268559;rank=1 chr3 . exon 2087588 2087727 . + . ID=Thaps268559.1;Parent=Thaps268559;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2087893 2088953 . + 0 ID=Thaps268559;Parent=Thaps268559;rank=2 chr3 . exon 2087893 2088953 . + . ID=Thaps268559.2;Parent=Thaps268559;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2089071 2089426 . + 0 ID=Thaps268559;Parent=Thaps268559;rank=3 chr3 . exon 2089071 2089426 . + . ID=Thaps268559.3;Parent=Thaps268559;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2089469 2089516 . + 0 ID=Thaps268559;Parent=Thaps268559;rank=4 chr3 . exon 2089469 2089516 . + . ID=Thaps268559.4;Parent=Thaps268559;constitutive=1;rank=4 chr3 . CDS 2089607 2089903 . + 0 ID=Thaps268559;Parent=Thaps268559;rank=5 chr3 . exon 2089607 2089903 . + . ID=Thaps268559.5;Parent=Thaps268559;constitutive=1;rank=5 chr3 ensembl protein_coding_gene 2084154 2086439 . + . ID=Thaps3903;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWA4];external_name=Thaps3903;logic_name=jgi_thaps3 chr3 ensembl transcript 2084154 2086439 . + . ID=Thaps3903;Parent=Thaps3903;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2084154 2084842 . + 0 ID=Thaps3903;Parent=Thaps3903;rank=1 chr3 . exon 2084154 2084842 . + . ID=Thaps3903.1;Parent=Thaps3903;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2085107 2085752 . + 0 ID=Thaps3903;Parent=Thaps3903;rank=2 chr3 . exon 2085107 2085752 . + . ID=Thaps3903.2;Parent=Thaps3903;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2085849 2086439 . + 0 ID=Thaps3903;Parent=Thaps3903;rank=3 chr3 . exon 2085849 2086439 . + . ID=Thaps3903.3;Parent=Thaps3903;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 2086560 2087384 . - . ID=Thaps3904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWA5];external_name=Thaps3904;logic_name=jgi_thaps3 chr3 ensembl transcript 2086560 2087384 . - . ID=Thaps3904;Parent=Thaps3904;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2086560 2087384 . - 0 ID=Thaps3904;Parent=Thaps3904;rank=1 chr3 . exon 2086560 2087384 . - . ID=Thaps3904.1;Parent=Thaps3904;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2090027 2090740 . - . ID=Thaps3906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWA7];external_name=Thaps3906;logic_name=jgi_thaps3 chr3 ensembl transcript 2090027 2090740 . - . ID=Thaps3906;Parent=Thaps3906;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2090027 2090740 . - 0 ID=Thaps3906;Parent=Thaps3906;rank=1 chr3 . exon 2090027 2090740 . - . ID=Thaps3906.1;Parent=Thaps3906;constitutive=1;rank=1 chr3 . repeat_region 2092316 2092323 . ? . description=dust chr3 . repeat_region 2094370 2094423 . ? . description=dust chr3 . repeat_region 2095574 2095598 . ? . description=trf chr3 . repeat_region 2095574 2095607 . ? . description=dust chr3 . repeat_region 2099287 2099328 . ? . description=trf chr3 ensembl protein_coding_gene 2093760 2096474 . - . ID=Thaps21986;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWA8];external_name=Thaps21986;logic_name=jgi_thaps3 chr3 ensembl transcript 2093760 2096474 . - . ID=Thaps21986;Parent=Thaps21986;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2093760 2096196 . - 0 ID=Thaps21986;Parent=Thaps21986;rank=2 chr3 . exon 2093760 2096196 . - . ID=Thaps21986.2;Parent=Thaps21986;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2096464 2096474 . - 0 ID=Thaps21986;Parent=Thaps21986;rank=1 chr3 . exon 2096464 2096474 . - . ID=Thaps21986.1;Parent=Thaps21986;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2096565 2098871 . + . ID=Thaps268560;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWA9];external_name=Thaps268560;logic_name=jgi_thaps3 chr3 ensembl transcript 2096565 2098871 . + . ID=Thaps268560;Parent=Thaps268560;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2096565 2097251 . + 0 ID=Thaps268560;Parent=Thaps268560;rank=1 chr3 . exon 2096565 2097251 . + . ID=Thaps268560.1;Parent=Thaps268560;constitutive=1;rank=1 chr3 . CDS 2097336 2098437 . + 0 ID=Thaps268560;Parent=Thaps268560;rank=2 chr3 . exon 2097336 2098437 . + . ID=Thaps268560.2;Parent=Thaps268560;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2098495 2098871 . + 0 ID=Thaps268560;Parent=Thaps268560;rank=3 chr3 . exon 2098495 2098871 . + . ID=Thaps268560.3;Parent=Thaps268560;constitutive=1;ensembl_end_phase=2;rank=3 chr3 ensembl protein_coding_gene 2108264 2109607 . - . ID=Thaps21989;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWB2];external_name=Thaps21989;logic_name=jgi_thaps3 chr3 ensembl transcript 2108264 2109607 . - . ID=Thaps21989;Parent=Thaps21989;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2108264 2108388 . - 0 ID=Thaps21989;Parent=Thaps21989;rank=3 chr3 . exon 2108264 2108388 . - . ID=Thaps21989.3;Parent=Thaps21989;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2108516 2108709 . - 0 ID=Thaps21989;Parent=Thaps21989;rank=2 chr3 . exon 2108516 2108709 . - . ID=Thaps21989.2;Parent=Thaps21989;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2108895 2109607 . - 0 ID=Thaps21989;Parent=Thaps21989;rank=1 chr3 . exon 2108895 2109607 . - . ID=Thaps21989.1;Parent=Thaps21989;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2110984 2111187 . - . ID=Thaps32713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWB3];external_name=Thaps32713;logic_name=jgi_thaps3 chr3 ensembl transcript 2110984 2111187 . - . ID=Thaps32713;Parent=Thaps32713;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2110984 2111187 . - 0 ID=Thaps32713;Parent=Thaps32713;rank=1 chr3 . exon 2110984 2111187 . - . ID=Thaps32713.1;Parent=Thaps32713;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2106663 2107346 . - . ID=Thaps32924;biotype=protein_coding;description=Ribulose-phosphate 3-epimerase [Source:UniProtKB/TrEMBL%3BAcc:B8BWB1];external_name=Thaps32924;logic_name=jgi_thaps3 chr3 ensembl transcript 2106663 2107346 . - . ID=Thaps32924;Parent=Thaps32924;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2106663 2107346 . - 0 ID=Thaps32924;Parent=Thaps32924;rank=1 chr3 . exon 2106663 2107346 . - . ID=Thaps32924.1;Parent=Thaps32924;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2101986 2104819 . - . ID=Thaps33225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWB0];external_name=Thaps33225;logic_name=jgi_thaps3 chr3 ensembl transcript 2101986 2104819 . - . ID=Thaps33225;Parent=Thaps33225;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2101986 2102210 . - 0 ID=Thaps33225;Parent=Thaps33225;rank=5 chr3 . exon 2101986 2102210 . - . ID=Thaps33225.5;Parent=Thaps33225;constitutive=1;rank=5 chr3 . CDS 2102451 2103278 . - 0 ID=Thaps33225;Parent=Thaps33225;rank=4 chr3 . exon 2102451 2103278 . - . ID=Thaps33225.4;Parent=Thaps33225;constitutive=1;rank=4 chr3 . CDS 2103363 2103743 . - 0 ID=Thaps33225;Parent=Thaps33225;rank=3 chr3 . exon 2103363 2103743 . - . ID=Thaps33225.3;Parent=Thaps33225;constitutive=1;rank=3 chr3 . CDS 2103818 2104380 . - 0 ID=Thaps33225;Parent=Thaps33225;rank=2 chr3 . exon 2103818 2104380 . - . ID=Thaps33225.2;Parent=Thaps33225;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2104594 2104819 . - 0 ID=Thaps33225;Parent=Thaps33225;rank=1 chr3 . exon 2104594 2104819 . - . ID=Thaps33225.1;Parent=Thaps33225;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 2111938 2111955 . ? . description=dust chr3 . repeat_region 2115385 2115407 . ? . description=dust chr3 . repeat_region 2115385 2115411 . ? . description=trf chr3 . repeat_region 2115531 2115555 . ? . description=trf chr3 . repeat_region 2117573 2117634 . ? . description=dust chr3 . repeat_region 2121292 2121300 . ? . description=dust chr3 ensembl protein_coding_gene 2119119 2119955 . + . ID=Thaps21991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWB6];external_name=Thaps21991;logic_name=jgi_thaps3 chr3 ensembl transcript 2119119 2119955 . + . ID=Thaps21991;Parent=Thaps21991;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2119119 2119288 . + 0 ID=Thaps21991;Parent=Thaps21991;rank=1 chr3 . exon 2119119 2119288 . + . ID=Thaps21991.1;Parent=Thaps21991;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2119374 2119448 . + 0 ID=Thaps21991;Parent=Thaps21991;rank=2 chr3 . exon 2119374 2119448 . + . ID=Thaps21991.2;Parent=Thaps21991;constitutive=1;rank=2 chr3 . CDS 2119532 2119612 . + 0 ID=Thaps21991;Parent=Thaps21991;rank=3 chr3 . exon 2119532 2119612 . + . ID=Thaps21991.3;Parent=Thaps21991;constitutive=1;rank=3 chr3 . CDS 2119700 2119955 . + 0 ID=Thaps21991;Parent=Thaps21991;rank=4 chr3 . exon 2119700 2119955 . + . ID=Thaps21991.4;Parent=Thaps21991;constitutive=1;ensembl_end_phase=1;rank=4 chr3 ensembl protein_coding_gene 2115860 2117326 . + . ID=Thaps3913;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWB4];external_name=Thaps3913;logic_name=jgi_thaps3 chr3 ensembl transcript 2115860 2117326 . + . ID=Thaps3913;Parent=Thaps3913;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2115860 2117326 . + 0 ID=Thaps3913;Parent=Thaps3913;rank=1 chr3 . exon 2115860 2117326 . + . ID=Thaps3913.1;Parent=Thaps3913;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2117432 2118055 . - . ID=Thaps3914;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWB5];external_name=Thaps3914;logic_name=jgi_thaps3 chr3 ensembl transcript 2117432 2118055 . - . ID=Thaps3914;Parent=Thaps3914;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2117432 2118055 . - 0 ID=Thaps3914;Parent=Thaps3914;rank=1 chr3 . exon 2117432 2118055 . - . ID=Thaps3914.1;Parent=Thaps3914;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2120300 2121067 . - . ID=Thaps3916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWB7];external_name=Thaps3916;logic_name=jgi_thaps3 chr3 ensembl transcript 2120300 2121067 . - . ID=Thaps3916;Parent=Thaps3916;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2120300 2121067 . - 0 ID=Thaps3916;Parent=Thaps3916;rank=1 chr3 . exon 2120300 2121067 . - . ID=Thaps3916.1;Parent=Thaps3916;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2122123 2123395 . - . ID=Thaps40089;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWB8];external_name=Thaps40089;logic_name=jgi_thaps3 chr3 ensembl transcript 2122123 2123395 . - . ID=Thaps40089;Parent=Thaps40089;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2122123 2122230 . - 0 ID=Thaps40089;Parent=Thaps40089;rank=4 chr3 . exon 2122123 2122230 . - . ID=Thaps40089.4;Parent=Thaps40089;constitutive=1;rank=4 chr3 . CDS 2122477 2122673 . - 0 ID=Thaps40089;Parent=Thaps40089;rank=3 chr3 . exon 2122477 2122673 . - . ID=Thaps40089.3;Parent=Thaps40089;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2122734 2122990 . - 0 ID=Thaps40089;Parent=Thaps40089;rank=2 chr3 . exon 2122734 2122990 . - . ID=Thaps40089.2;Parent=Thaps40089;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2123079 2123395 . - 0 ID=Thaps40089;Parent=Thaps40089;rank=1 chr3 . exon 2123079 2123395 . - . ID=Thaps40089.1;Parent=Thaps40089;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . repeat_region 2138704 2138711 . ? . description=dust chr3 . repeat_region 2140309 2140357 . ? . description=trf chr3 . repeat_region 2140310 2140366 . ? . description=dust chr3 ensembl protein_coding_gene 2137519 2138052 . + . ID=Thaps16926;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC2];external_name=Thaps16926;logic_name=jgi_thaps3 chr3 ensembl transcript 2137519 2138052 . + . ID=Thaps16926;Parent=Thaps16926;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2137519 2138052 . + 0 ID=Thaps16926;Parent=Thaps16926;rank=1 chr3 . exon 2137519 2138052 . + . ID=Thaps16926.1;Parent=Thaps16926;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2135679 2137124 . - . ID=Thaps21994;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC1];external_name=Thaps21994;logic_name=jgi_thaps3 chr3 ensembl transcript 2135679 2137124 . - . ID=Thaps21994;Parent=Thaps21994;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2135679 2137124 . - 0 ID=Thaps21994;Parent=Thaps21994;rank=1 chr3 . exon 2135679 2137124 . - . ID=Thaps21994.1;Parent=Thaps21994;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2140857 2143316 . + . ID=Thaps21996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC4];external_name=Thaps21996;logic_name=jgi_thaps3 chr3 ensembl transcript 2140857 2143316 . + . ID=Thaps21996;Parent=Thaps21996;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2140857 2143316 . + 0 ID=Thaps21996;Parent=Thaps21996;rank=1 chr3 . exon 2140857 2143316 . + . ID=Thaps21996.1;Parent=Thaps21996;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2132335 2134363 . + . ID=Thaps27656;biotype=protein_coding;description=Heat shock protein/chaperone [Source:UniProtKB/TrEMBL%3BAcc:B8BWB9];external_name=HSP70_4;logic_name=jgi_thaps3 chr3 ensembl transcript 2132335 2134363 . + . ID=Thaps27656;Parent=Thaps27656;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2132335 2132899 . + 0 ID=Thaps27656;Parent=Thaps27656;rank=1 chr3 . exon 2132335 2132899 . + . ID=Thaps27656.1;Parent=Thaps27656;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2132994 2134363 . + 0 ID=Thaps27656;Parent=Thaps27656;rank=2 chr3 . exon 2132994 2134363 . + . ID=Thaps27656.2;Parent=Thaps27656;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 2134775 2135620 . + . ID=Thaps3919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC0];external_name=Thaps3919;logic_name=jgi_thaps3 chr3 ensembl transcript 2134775 2135620 . + . ID=Thaps3919;Parent=Thaps3919;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2134775 2135620 . + 0 ID=Thaps3919;Parent=Thaps3919;rank=1 chr3 . exon 2134775 2135620 . + . ID=Thaps3919.1;Parent=Thaps3919;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2138914 2139858 . - . ID=Thaps3922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC3];external_name=Thaps3922;logic_name=jgi_thaps3 chr3 ensembl transcript 2138914 2139858 . - . ID=Thaps3922;Parent=Thaps3922;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2138914 2139858 . - 0 ID=Thaps3922;Parent=Thaps3922;rank=1 chr3 . exon 2138914 2139858 . - . ID=Thaps3922.1;Parent=Thaps3922;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2146597 2154971 . - . ID=Thaps21997;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC6];external_name=Thaps21997;logic_name=jgi_thaps3 chr3 ensembl transcript 2146597 2154971 . - . ID=Thaps21997;Parent=Thaps21997;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2146597 2147466 . - 0 ID=Thaps21997;Parent=Thaps21997;rank=8 chr3 . exon 2146597 2147466 . - . ID=Thaps21997.8;Parent=Thaps21997;constitutive=1;rank=8 chr3 . CDS 2147554 2149298 . - 0 ID=Thaps21997;Parent=Thaps21997;rank=7 chr3 . exon 2147554 2149298 . - . ID=Thaps21997.7;Parent=Thaps21997;constitutive=1;ensembl_end_phase=2;rank=7 chr3 . CDS 2149386 2150610 . - 0 ID=Thaps21997;Parent=Thaps21997;rank=6 chr3 . exon 2149386 2150610 . - . ID=Thaps21997.6;Parent=Thaps21997;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 2150712 2150855 . - 0 ID=Thaps21997;Parent=Thaps21997;rank=5 chr3 . exon 2150712 2150855 . - . ID=Thaps21997.5;Parent=Thaps21997;constitutive=1;rank=5 chr3 . CDS 2150996 2151179 . - 0 ID=Thaps21997;Parent=Thaps21997;rank=4 chr3 . exon 2150996 2151179 . - . ID=Thaps21997.4;Parent=Thaps21997;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 2151258 2151519 . - 0 ID=Thaps21997;Parent=Thaps21997;rank=3 chr3 . exon 2151258 2151519 . - . ID=Thaps21997.3;Parent=Thaps21997;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 2151597 2152105 . - 0 ID=Thaps21997;Parent=Thaps21997;rank=2 chr3 . CDS 2152189 2154971 . - 0 ID=Thaps21997;Parent=Thaps21997;rank=1 chr3 ensembl protein_coding_gene 2144417 2146573 . + . ID=Thaps3924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC5];external_name=Thaps3924;logic_name=jgi_thaps3 chr3 ensembl transcript 2144417 2146573 . + . ID=Thaps3924;Parent=Thaps3924;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2144417 2146573 . + 0 ID=Thaps3924;Parent=Thaps3924;rank=1 chr3 . exon 2144417 2146573 . + . ID=Thaps3924.1;Parent=Thaps3924;constitutive=1;rank=1 chr3 . exon 2151597 2152105 . - . ID=Thaps21997.2;Parent=Thaps21997;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 2152189 2154971 . - . ID=Thaps21997.1;Parent=Thaps21997;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2155263 2157890 . + . ID=Thaps3926;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC7];external_name=Thaps3926;logic_name=jgi_thaps3 chr3 ensembl transcript 2155263 2157890 . + . ID=Thaps3926;Parent=Thaps3926;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2155263 2157890 . + 0 ID=Thaps3926;Parent=Thaps3926;rank=1 chr3 . exon 2155263 2157890 . + . ID=Thaps3926.1;Parent=Thaps3926;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2160583 2162097 . + . ID=Thaps3928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC8];external_name=Thaps3928;logic_name=jgi_thaps3 chr3 ensembl transcript 2160583 2162097 . + . ID=Thaps3928;Parent=Thaps3928;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2160583 2160652 . + 0 ID=Thaps3928;Parent=Thaps3928;rank=1 chr3 . exon 2160583 2160652 . + . ID=Thaps3928.1;Parent=Thaps3928;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2160786 2161704 . + 0 ID=Thaps3928;Parent=Thaps3928;rank=2 chr3 . exon 2160786 2161704 . + . ID=Thaps3928.2;Parent=Thaps3928;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2161845 2162097 . + 0 ID=Thaps3928;Parent=Thaps3928;rank=3 chr3 . repeat_region 2168944 2168952 . ? . description=dust chr3 ensembl protein_coding_gene 2167032 2168033 . - . ID=Thaps15328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWD0];external_name=Thaps15328;logic_name=jgi_thaps3 chr3 ensembl transcript 2167032 2168033 . - . ID=Thaps15328;Parent=Thaps15328;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2167032 2167502 . - 0 ID=Thaps15328;Parent=Thaps15328;rank=2 chr3 . exon 2167032 2167502 . - . ID=Thaps15328.2;Parent=Thaps15328;constitutive=1;rank=2 chr3 . CDS 2167653 2168033 . - 0 ID=Thaps15328;Parent=Thaps15328;rank=1 chr3 . exon 2167653 2168033 . - . ID=Thaps15328.1;Parent=Thaps15328;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2169251 2169868 . + . ID=Thaps32745;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWD1];external_name=Thaps32745;logic_name=jgi_thaps3 chr3 ensembl transcript 2169251 2169868 . + . ID=Thaps32745;Parent=Thaps32745;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2169251 2169868 . + 0 ID=Thaps32745;Parent=Thaps32745;rank=1 chr3 . exon 2169251 2169868 . + . ID=Thaps32745.1;Parent=Thaps32745;constitutive=1;rank=1 chr3 . exon 2161845 2162097 . + . ID=Thaps3928.3;Parent=Thaps3928;constitutive=1;ensembl_end_phase=1;rank=3 chr3 ensembl protein_coding_gene 2162587 2165226 . + . ID=Thaps3929;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWC9];external_name=Thaps3929;logic_name=jgi_thaps3 chr3 ensembl transcript 2162587 2165226 . + . ID=Thaps3929;Parent=Thaps3929;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2162587 2165226 . + 0 ID=Thaps3929;Parent=Thaps3929;rank=1 chr3 . exon 2162587 2165226 . + . ID=Thaps3929.1;Parent=Thaps3929;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2170603 2171544 . + . ID=Thaps3932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWD2];external_name=Thaps3932;logic_name=jgi_thaps3 chr3 ensembl transcript 2170603 2171544 . + . ID=Thaps3932;Parent=Thaps3932;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2170603 2171544 . + 0 ID=Thaps3932;Parent=Thaps3932;rank=1 chr3 . exon 2170603 2171544 . + . ID=Thaps3932.1;Parent=Thaps3932;constitutive=1;rank=1 chr3 . repeat_region 2177670 2177701 . ? . description=trf chr3 ensembl protein_coding_gene 2179370 2180623 . + . ID=Thaps33056;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWD5];external_name=Thaps33056;logic_name=jgi_thaps3 chr3 ensembl transcript 2179370 2180623 . + . ID=Thaps33056;Parent=Thaps33056;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2179370 2179449 . + 0 ID=Thaps33056;Parent=Thaps33056;rank=1 chr3 . exon 2179370 2179449 . + . ID=Thaps33056.1;Parent=Thaps33056;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2179624 2180623 . + 0 ID=Thaps33056;Parent=Thaps33056;rank=2 chr3 . exon 2179624 2180623 . + . ID=Thaps33056.2;Parent=Thaps33056;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 2172046 2173524 . + . ID=Thaps3933;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWD3];external_name=Thaps3933;logic_name=jgi_thaps3 chr3 ensembl transcript 2172046 2173524 . + . ID=Thaps3933;Parent=Thaps3933;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2172046 2173524 . + 0 ID=Thaps3933;Parent=Thaps3933;rank=1 chr3 . exon 2172046 2173524 . + . ID=Thaps3933.1;Parent=Thaps3933;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2173579 2178984 . - . ID=Thaps3934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWD4];external_name=Thaps3934;logic_name=jgi_thaps3 chr3 ensembl transcript 2173579 2178984 . - . ID=Thaps3934;Parent=Thaps3934;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2173579 2175087 . - 0 ID=Thaps3934;Parent=Thaps3934;rank=4 chr3 . exon 2173579 2175087 . - . ID=Thaps3934.4;Parent=Thaps3934;constitutive=1;rank=4 chr3 . CDS 2175172 2175317 . - 0 ID=Thaps3934;Parent=Thaps3934;rank=3 chr3 . exon 2175172 2175317 . - . ID=Thaps3934.3;Parent=Thaps3934;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2175405 2175734 . - 0 ID=Thaps3934;Parent=Thaps3934;rank=2 chr3 . exon 2175405 2175734 . - . ID=Thaps3934.2;Parent=Thaps3934;constitutive=1;rank=2 chr3 . CDS 2175852 2178984 . - 0 ID=Thaps3934;Parent=Thaps3934;rank=1 chr3 . exon 2175852 2178984 . - . ID=Thaps3934.1;Parent=Thaps3934;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 2184661 2184668 . ? . description=dust chr3 ensembl protein_coding_gene 2186762 2190280 . - . ID=Thaps22002;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWD9];external_name=Thaps22002;logic_name=jgi_thaps3 chr3 ensembl transcript 2186762 2190280 . - . ID=Thaps22002;Parent=Thaps22002;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2186762 2190280 . - 0 ID=Thaps22002;Parent=Thaps22002;rank=1 chr3 . exon 2186762 2190280 . - . ID=Thaps22002.1;Parent=Thaps22002;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2190709 2193613 . + . ID=Thaps22003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWE0];external_name=Thaps22003;logic_name=jgi_thaps3 chr3 ensembl transcript 2190709 2193613 . + . ID=Thaps22003;Parent=Thaps22003;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2190709 2191620 . + 0 ID=Thaps22003;Parent=Thaps22003;rank=1 chr3 . exon 2190709 2191620 . + . ID=Thaps22003.1;Parent=Thaps22003;constitutive=1;rank=1 chr3 . CDS 2191713 2191990 . + 0 ID=Thaps22003;Parent=Thaps22003;rank=2 chr3 . CDS 2192107 2193257 . + 0 ID=Thaps22003;Parent=Thaps22003;rank=3 chr3 . CDS 2193345 2193613 . + 0 ID=Thaps22003;Parent=Thaps22003;rank=4 chr3 ensembl protein_coding_gene 2184942 2186334 . + . ID=Thaps268564;biotype=protein_coding;description=Probable papain cysteine protease [Source:UniProtKB/TrEMBL%3BAcc:B8BWD8];external_name=Thaps268564;logic_name=jgi_thaps3 chr3 ensembl transcript 2184942 2186334 . + . ID=Thaps268564;Parent=Thaps268564;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2184942 2184991 . + 0 ID=Thaps268564;Parent=Thaps268564;rank=1 chr3 . exon 2184942 2184991 . + . ID=Thaps268564.1;Parent=Thaps268564;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2185094 2185201 . + 0 ID=Thaps268564;Parent=Thaps268564;rank=2 chr3 . exon 2185094 2185201 . + . ID=Thaps268564.2;Parent=Thaps268564;constitutive=1;rank=2 chr3 . CDS 2185302 2185476 . + 0 ID=Thaps268564;Parent=Thaps268564;rank=3 chr3 . exon 2185302 2185476 . + . ID=Thaps268564.3;Parent=Thaps268564;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 2185578 2186000 . + 0 ID=Thaps268564;Parent=Thaps268564;rank=4 chr3 . exon 2185578 2186000 . + . ID=Thaps268564.4;Parent=Thaps268564;constitutive=1;rank=4 chr3 . CDS 2186080 2186334 . + 0 ID=Thaps268564;Parent=Thaps268564;rank=5 chr3 . exon 2186080 2186334 . + . ID=Thaps268564.5;Parent=Thaps268564;constitutive=1;rank=5 chr3 ensembl protein_coding_gene 2181396 2182046 . + . ID=Thaps3935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWD6];external_name=Thaps3935;logic_name=jgi_thaps3 chr3 ensembl transcript 2181396 2182046 . + . ID=Thaps3935;Parent=Thaps3935;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2181396 2182046 . + 0 ID=Thaps3935;Parent=Thaps3935;rank=1 chr3 . exon 2181396 2182046 . + . ID=Thaps3935.1;Parent=Thaps3935;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2182413 2184146 . - . ID=Thaps3936;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWD7];external_name=Thaps3936;logic_name=jgi_thaps3 chr3 ensembl transcript 2182413 2184146 . - . ID=Thaps3936;Parent=Thaps3936;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2182413 2184146 . - 0 ID=Thaps3936;Parent=Thaps3936;rank=1 chr3 . exon 2182413 2184146 . - . ID=Thaps3936.1;Parent=Thaps3936;constitutive=1;rank=1 chr3 . repeat_region 2192095 2192129 . ? . description=trf chr3 . exon 2191713 2191990 . + . ID=Thaps22003.2;Parent=Thaps22003;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . exon 2192107 2193257 . + . ID=Thaps22003.3;Parent=Thaps22003;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . exon 2193345 2193613 . + . ID=Thaps22003.4;Parent=Thaps22003;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 2195150 2195503 . + . ID=Thaps32596;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWE1];external_name=Thaps32596;logic_name=jgi_thaps3 chr3 ensembl transcript 2195150 2195503 . + . ID=Thaps32596;Parent=Thaps32596;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2195150 2195260 . + 0 ID=Thaps32596;Parent=Thaps32596;rank=1 chr3 . exon 2195150 2195260 . + . ID=Thaps32596.1;Parent=Thaps32596;constitutive=1;rank=1 chr3 . CDS 2195291 2195503 . + 0 ID=Thaps32596;Parent=Thaps32596;rank=2 chr3 . exon 2195291 2195503 . + . ID=Thaps32596.2;Parent=Thaps32596;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2198191 2199279 . - . ID=Thaps33094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWE3];external_name=Thaps33094;logic_name=jgi_thaps3 chr3 ensembl transcript 2198191 2199279 . - . ID=Thaps33094;Parent=Thaps33094;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2198191 2199279 . - 0 ID=Thaps33094;Parent=Thaps33094;rank=1 chr3 . exon 2198191 2199279 . - . ID=Thaps33094.1;Parent=Thaps33094;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2196698 2197741 . - . ID=Thaps33205;biotype=protein_coding;description=K transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BWE2];external_name=Thaps33205;logic_name=jgi_thaps3 chr3 ensembl transcript 2196698 2197741 . - . ID=Thaps33205;Parent=Thaps33205;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2196698 2197741 . - 0 ID=Thaps33205;Parent=Thaps33205;rank=1 chr3 . exon 2196698 2197741 . - . ID=Thaps33205.1;Parent=Thaps33205;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2200972 2201631 . - . ID=Thaps3943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWE5];external_name=Thaps3943;logic_name=jgi_thaps3 chr3 ensembl transcript 2200972 2201631 . - . ID=Thaps3943;Parent=Thaps3943;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2200972 2201631 . - 0 ID=Thaps3943;Parent=Thaps3943;rank=1 chr3 . exon 2200972 2201631 . - . ID=Thaps3943.1;Parent=Thaps3943;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2200004 2200795 . + . ID=Thaps40097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWE4];external_name=Thaps40097;logic_name=jgi_thaps3 chr3 ensembl transcript 2200004 2200795 . + . ID=Thaps40097;Parent=Thaps40097;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2200004 2200795 . + 0 ID=Thaps40097;Parent=Thaps40097;rank=1 chr3 . exon 2200004 2200795 . + . ID=Thaps40097.1;Parent=Thaps40097;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2203687 2203953 . - . ID=Thaps20024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWE7];external_name=Thaps20024;logic_name=jgi_thaps3 chr3 ensembl transcript 2203687 2203953 . - . ID=Thaps20024;Parent=Thaps20024;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2203687 2203953 . - 0 ID=Thaps20024;Parent=Thaps20024;rank=1 chr3 . exon 2203687 2203953 . - . ID=Thaps20024.1;Parent=Thaps20024;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2208634 2209347 . - . ID=Thaps22007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF1];external_name=Thaps22007;logic_name=jgi_thaps3 chr3 ensembl transcript 2208634 2209347 . - . ID=Thaps22007;Parent=Thaps22007;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2208634 2209347 . - 0 ID=Thaps22007;Parent=Thaps22007;rank=1 chr3 . exon 2208634 2209347 . - . ID=Thaps22007.1;Parent=Thaps22007;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2210889 2214065 . - . ID=Thaps22008;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF3];external_name=Thaps22008;logic_name=jgi_thaps3 chr3 ensembl transcript 2210889 2214065 . - . ID=Thaps22008;Parent=Thaps22008;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2210889 2214065 . - 0 ID=Thaps22008;Parent=Thaps22008;rank=1 chr3 . exon 2210889 2214065 . - . ID=Thaps22008.1;Parent=Thaps22008;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2202074 2203525 . + . ID=Thaps3944;biotype=protein_coding;description=GTP binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWE6];external_name=Thaps3944;logic_name=jgi_thaps3 chr3 ensembl transcript 2202074 2203525 . + . ID=Thaps3944;Parent=Thaps3944;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2202074 2203525 . + 0 ID=Thaps3944;Parent=Thaps3944;rank=1 chr3 . exon 2202074 2203525 . + . ID=Thaps3944.1;Parent=Thaps3944;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2204186 2204596 . - . ID=Thaps3945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWE8];external_name=Thaps3945;logic_name=jgi_thaps3 chr3 ensembl transcript 2204186 2204596 . - . ID=Thaps3945;Parent=Thaps3945;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2204186 2204596 . - 0 ID=Thaps3945;Parent=Thaps3945;rank=1 chr3 . exon 2204186 2204596 . - . ID=Thaps3945.1;Parent=Thaps3945;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2205651 2207015 . - . ID=Thaps3946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWE9];external_name=Thaps3946;logic_name=jgi_thaps3 chr3 ensembl transcript 2205651 2207015 . - . ID=Thaps3946;Parent=Thaps3946;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2205651 2207015 . - 0 ID=Thaps3946;Parent=Thaps3946;rank=1 chr3 . exon 2205651 2207015 . - . ID=Thaps3946.1;Parent=Thaps3946;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2207330 2208375 . + . ID=Thaps3947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF0];external_name=Thaps3947;logic_name=jgi_thaps3 chr3 ensembl transcript 2207330 2208375 . + . ID=Thaps3947;Parent=Thaps3947;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2207330 2207927 . + 0 ID=Thaps3947;Parent=Thaps3947;rank=1 chr3 . exon 2207330 2207927 . + . ID=Thaps3947.1;Parent=Thaps3947;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2208002 2208375 . + 0 ID=Thaps3947;Parent=Thaps3947;rank=2 chr3 . exon 2208002 2208375 . + . ID=Thaps3947.2;Parent=Thaps3947;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 2209672 2210766 . + . ID=Thaps3949;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF2];external_name=Thaps3949;logic_name=jgi_thaps3 chr3 ensembl transcript 2209672 2210766 . + . ID=Thaps3949;Parent=Thaps3949;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2209672 2210766 . + 0 ID=Thaps3949;Parent=Thaps3949;rank=1 chr3 . exon 2209672 2210766 . + . ID=Thaps3949.1;Parent=Thaps3949;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2219861 2223757 . - . ID=Thaps22009;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF8];external_name=Thaps22009;logic_name=jgi_thaps3 chr3 ensembl transcript 2219861 2223757 . - . ID=Thaps22009;Parent=Thaps22009;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2219861 2221507 . - 0 ID=Thaps22009;Parent=Thaps22009;rank=7 chr3 . exon 2219861 2221507 . - . ID=Thaps22009.7;Parent=Thaps22009;constitutive=1;rank=7 chr3 . CDS 2221595 2222499 . - 0 ID=Thaps22009;Parent=Thaps22009;rank=6 chr3 . CDS 2222591 2222626 . - 0 ID=Thaps22009;Parent=Thaps22009;rank=5 chr3 . CDS 2222704 2222967 . - 0 ID=Thaps22009;Parent=Thaps22009;rank=4 chr3 . CDS 2223063 2223245 . - 0 ID=Thaps22009;Parent=Thaps22009;rank=3 chr3 . CDS 2223300 2223392 . - 0 ID=Thaps22009;Parent=Thaps22009;rank=2 chr3 . CDS 2223484 2223757 . - 0 ID=Thaps22009;Parent=Thaps22009;rank=1 chr3 ensembl protein_coding_gene 2214497 2215381 . + . ID=Thaps3951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF4];external_name=Thaps3951;logic_name=jgi_thaps3 chr3 ensembl transcript 2214497 2215381 . + . ID=Thaps3951;Parent=Thaps3951;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2214497 2215381 . + 0 ID=Thaps3951;Parent=Thaps3951;rank=1 chr3 . exon 2214497 2215381 . + . ID=Thaps3951.1;Parent=Thaps3951;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2215753 2216136 . - . ID=Thaps3952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF5];external_name=Thaps3952;logic_name=jgi_thaps3 chr3 ensembl transcript 2215753 2216136 . - . ID=Thaps3952;Parent=Thaps3952;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2215753 2215964 . - 0 ID=Thaps3952;Parent=Thaps3952;rank=2 chr3 . exon 2215753 2215964 . - . ID=Thaps3952.2;Parent=Thaps3952;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2216028 2216136 . - 0 ID=Thaps3952;Parent=Thaps3952;rank=1 chr3 . exon 2216028 2216136 . - . ID=Thaps3952.1;Parent=Thaps3952;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2216540 2217886 . + . ID=Thaps3953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF6];external_name=Thaps3953;logic_name=jgi_thaps3 chr3 ensembl transcript 2216540 2217886 . + . ID=Thaps3953;Parent=Thaps3953;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2216540 2216582 . + 0 ID=Thaps3953;Parent=Thaps3953;rank=1 chr3 . exon 2216540 2216582 . + . ID=Thaps3953.1;Parent=Thaps3953;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2216883 2217886 . + 0 ID=Thaps3953;Parent=Thaps3953;rank=2 chr3 . exon 2216883 2217886 . + . ID=Thaps3953.2;Parent=Thaps3953;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 2218195 2219568 . + . ID=Thaps3954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF7];external_name=Thaps3954;logic_name=jgi_thaps3 chr3 ensembl transcript 2218195 2219568 . + . ID=Thaps3954;Parent=Thaps3954;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2218195 2219568 . + 0 ID=Thaps3954;Parent=Thaps3954;rank=1 chr3 . exon 2218195 2219568 . + . ID=Thaps3954.1;Parent=Thaps3954;constitutive=1;rank=1 chr3 . repeat_region 2222761 2222779 . ? . description=dust chr3 . repeat_region 2225305 2225363 . ? . description=trf chr3 . exon 2221595 2222499 . - . ID=Thaps22009.6;Parent=Thaps22009;constitutive=1;ensembl_end_phase=2;rank=6 chr3 . exon 2222591 2222626 . - . ID=Thaps22009.5;Parent=Thaps22009;constitutive=1;rank=5 chr3 . exon 2222704 2222967 . - . ID=Thaps22009.4;Parent=Thaps22009;constitutive=1;rank=4 chr3 . exon 2223063 2223245 . - . ID=Thaps22009.3;Parent=Thaps22009;constitutive=1;rank=3 chr3 . exon 2223300 2223392 . - . ID=Thaps22009.2;Parent=Thaps22009;constitutive=1;rank=2 chr3 . exon 2223484 2223757 . - . ID=Thaps22009.1;Parent=Thaps22009;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2228446 2230161 . - . ID=Thaps22011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWG1];external_name=Thaps22011;logic_name=jgi_thaps3 chr3 ensembl transcript 2228446 2230161 . - . ID=Thaps22011;Parent=Thaps22011;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2228446 2230161 . - 0 ID=Thaps22011;Parent=Thaps22011;rank=1 chr3 . exon 2228446 2230161 . - . ID=Thaps22011.1;Parent=Thaps22011;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2225486 2227639 . - . ID=Thaps32586;biotype=protein_coding;description=Inorganic H+ pyrophosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BWG0];external_name=Thaps32586;logic_name=jgi_thaps3 chr3 ensembl transcript 2225486 2227639 . - . ID=Thaps32586;Parent=Thaps32586;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2225486 2226288 . - 0 ID=Thaps32586;Parent=Thaps32586;rank=3 chr3 . exon 2225486 2226288 . - . ID=Thaps32586.3;Parent=Thaps32586;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2226382 2226611 . - 0 ID=Thaps32586;Parent=Thaps32586;rank=2 chr3 . exon 2226382 2226611 . - . ID=Thaps32586.2;Parent=Thaps32586;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2226684 2227639 . - 0 ID=Thaps32586;Parent=Thaps32586;rank=1 chr3 . exon 2226684 2227639 . - . ID=Thaps32586.1;Parent=Thaps32586;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2224227 2224544 . + . ID=Thaps3956;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWF9];external_name=Thaps3956;logic_name=jgi_thaps3 chr3 ensembl transcript 2224227 2224544 . + . ID=Thaps3956;Parent=Thaps3956;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2224227 2224544 . + 0 ID=Thaps3956;Parent=Thaps3956;rank=1 chr3 . exon 2224227 2224544 . + . ID=Thaps3956.1;Parent=Thaps3956;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2230681 2231929 . - . ID=Thaps3959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWG2];external_name=Thaps3959;logic_name=jgi_thaps3 chr3 ensembl transcript 2230681 2231929 . - . ID=Thaps3959;Parent=Thaps3959;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2230681 2231286 . - 0 ID=Thaps3959;Parent=Thaps3959;rank=3 chr3 . exon 2230681 2231286 . - . ID=Thaps3959.3;Parent=Thaps3959;constitutive=1;rank=3 chr3 . CDS 2231381 2231560 . - 0 ID=Thaps3959;Parent=Thaps3959;rank=2 chr3 . CDS 2231642 2231929 . - 0 ID=Thaps3959;Parent=Thaps3959;rank=1 chr3 ensembl protein_coding_gene 2239126 2239893 . - . ID=Thaps17302;biotype=protein_coding;description=Inositol monophosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BWG7];external_name=Thaps17302;logic_name=jgi_thaps3 chr3 ensembl transcript 2239126 2239893 . - . ID=Thaps17302;Parent=Thaps17302;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2239126 2239665 . - 0 ID=Thaps17302;Parent=Thaps17302;rank=2 chr3 . exon 2239126 2239665 . - . ID=Thaps17302.2;Parent=Thaps17302;constitutive=1;rank=2 chr3 . CDS 2239765 2239893 . - 0 ID=Thaps17302;Parent=Thaps17302;rank=1 chr3 . exon 2239765 2239893 . - . ID=Thaps17302.1;Parent=Thaps17302;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2236540 2236980 . - . ID=Thaps32678;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWG5];external_name=Thaps32678;logic_name=jgi_thaps3 chr3 ensembl transcript 2236540 2236980 . - . ID=Thaps32678;Parent=Thaps32678;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2236540 2236980 . - 0 ID=Thaps32678;Parent=Thaps32678;rank=1 chr3 . exon 2236540 2236980 . - . ID=Thaps32678.1;Parent=Thaps32678;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2233163 2233369 . - . ID=Thaps32788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWG3];external_name=Thaps32788;logic_name=jgi_thaps3 chr3 ensembl transcript 2233163 2233369 . - . ID=Thaps32788;Parent=Thaps32788;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2233163 2233369 . - 0 ID=Thaps32788;Parent=Thaps32788;rank=1 chr3 . exon 2233163 2233369 . - . ID=Thaps32788.1;Parent=Thaps32788;constitutive=1;rank=1 chr3 . exon 2231381 2231560 . - . ID=Thaps3959.2;Parent=Thaps3959;constitutive=1;rank=2 chr3 . exon 2231642 2231929 . - . ID=Thaps3959.1;Parent=Thaps3959;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2237952 2238854 . + . ID=Thaps3963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWG6];external_name=Thaps3963;logic_name=jgi_thaps3 chr3 ensembl transcript 2237952 2238854 . + . ID=Thaps3963;Parent=Thaps3963;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2237952 2238854 . + 0 ID=Thaps3963;Parent=Thaps3963;rank=1 chr3 . exon 2237952 2238854 . + . ID=Thaps3963.1;Parent=Thaps3963;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2233756 2234537 . + . ID=Thaps40107;biotype=protein_coding;description=Eucarytic translation initiation factor 5A [Source:UniProtKB/TrEMBL%3BAcc:B8BWG4];external_name=IEF5;logic_name=jgi_thaps3 chr3 ensembl transcript 2233756 2234537 . + . ID=Thaps40107;Parent=Thaps40107;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2233756 2233847 . + 0 ID=Thaps40107;Parent=Thaps40107;rank=1 chr3 . exon 2233756 2233847 . + . ID=Thaps40107.1;Parent=Thaps40107;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2234150 2234537 . + 0 ID=Thaps40107;Parent=Thaps40107;rank=2 chr3 . exon 2234150 2234537 . + . ID=Thaps40107.2;Parent=Thaps40107;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 2241038 2246386 . + . ID=Thaps22016;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BWG8];external_name=Thaps22016;logic_name=jgi_thaps3 chr3 ensembl transcript 2241038 2246386 . + . ID=Thaps22016;Parent=Thaps22016;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2241038 2241994 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=1 chr3 . exon 2241038 2241994 . + . ID=Thaps22016.1;Parent=Thaps22016;constitutive=1;rank=1 chr3 . CDS 2242080 2242905 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=2 chr3 . exon 2242080 2242905 . + . ID=Thaps22016.2;Parent=Thaps22016;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2242958 2243212 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=3 chr3 . exon 2242958 2243212 . + . ID=Thaps22016.3;Parent=Thaps22016;constitutive=1;rank=3 chr3 . CDS 2243290 2243570 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=4 chr3 . exon 2243290 2243570 . + . ID=Thaps22016.4;Parent=Thaps22016;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 2243658 2243966 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=5 chr3 . exon 2243658 2243966 . + . ID=Thaps22016.5;Parent=Thaps22016;constitutive=1;rank=5 chr3 . CDS 2244041 2244314 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=6 chr3 . exon 2244041 2244314 . + . ID=Thaps22016.6;Parent=Thaps22016;constitutive=1;ensembl_end_phase=1;rank=6 chr3 . CDS 2244396 2244888 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=7 chr3 . exon 2244396 2244888 . + . ID=Thaps22016.7;Parent=Thaps22016;constitutive=1;ensembl_end_phase=1;rank=7 chr3 . CDS 2244975 2245405 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=8 chr3 . exon 2244975 2245405 . + . ID=Thaps22016.8;Parent=Thaps22016;constitutive=1;ensembl_end_phase=2;rank=8 chr3 . CDS 2245484 2245539 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=9 chr3 . exon 2245484 2245539 . + . ID=Thaps22016.9;Parent=Thaps22016;constitutive=1;ensembl_end_phase=2;rank=9 chr3 . CDS 2245619 2245637 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=10 chr3 . exon 2245619 2245637 . + . ID=Thaps22016.10;Parent=Thaps22016;constitutive=1;ensembl_end_phase=1;rank=10 chr3 . CDS 2245718 2245992 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=11 chr3 . exon 2245718 2245992 . + . ID=Thaps22016.11;Parent=Thaps22016;constitutive=1;ensembl_end_phase=2;rank=11 chr3 . CDS 2246082 2246178 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=12 chr3 . exon 2246082 2246178 . + . ID=Thaps22016.12;Parent=Thaps22016;constitutive=1;ensembl_end_phase=1;rank=12 chr3 . CDS 2246277 2246386 . + 0 ID=Thaps22016;Parent=Thaps22016;rank=13 chr3 . exon 2246277 2246386 . + . ID=Thaps22016.13;Parent=Thaps22016;constitutive=1;ensembl_end_phase=2;rank=13 chr3 ensembl protein_coding_gene 2248559 2250386 . - . ID=Thaps32789;biotype=protein_coding;description=Propionyl-coa carboxylase [Source:UniProtKB/TrEMBL%3BAcc:B8BWH0];external_name=PCC1;logic_name=jgi_thaps3 chr3 ensembl transcript 2248559 2250386 . - . ID=Thaps32789;Parent=Thaps32789;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2248559 2248747 . - 0 ID=Thaps32789;Parent=Thaps32789;rank=5 chr3 . exon 2248559 2248747 . - . ID=Thaps32789.5;Parent=Thaps32789;constitutive=1;rank=5 chr3 . CDS 2248826 2249580 . - 0 ID=Thaps32789;Parent=Thaps32789;rank=4 chr3 . exon 2248826 2249580 . - . ID=Thaps32789.4;Parent=Thaps32789;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 2249667 2249858 . - 0 ID=Thaps32789;Parent=Thaps32789;rank=3 chr3 . exon 2249667 2249858 . - . ID=Thaps32789.3;Parent=Thaps32789;constitutive=1;rank=3 chr3 . CDS 2249940 2250098 . - 0 ID=Thaps32789;Parent=Thaps32789;rank=2 chr3 . exon 2249940 2250098 . - . ID=Thaps32789.2;Parent=Thaps32789;constitutive=1;rank=2 chr3 . CDS 2250176 2250386 . - 0 ID=Thaps32789;Parent=Thaps32789;rank=1 chr3 . exon 2250176 2250386 . - . ID=Thaps32789.1;Parent=Thaps32789;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2246491 2247654 . - . ID=Thaps3966;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWG9];external_name=Thaps3966;logic_name=jgi_thaps3 chr3 ensembl transcript 2246491 2247654 . - . ID=Thaps3966;Parent=Thaps3966;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2246491 2246747 . - 0 ID=Thaps3966;Parent=Thaps3966;rank=3 chr3 . exon 2246491 2246747 . - . ID=Thaps3966.3;Parent=Thaps3966;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2246772 2247068 . - 0 ID=Thaps3966;Parent=Thaps3966;rank=2 chr3 . exon 2246772 2247068 . - . ID=Thaps3966.2;Parent=Thaps3966;constitutive=1;rank=2 chr3 . CDS 2247165 2247654 . - 0 ID=Thaps3966;Parent=Thaps3966;rank=1 chr3 . exon 2247165 2247654 . - . ID=Thaps3966.1;Parent=Thaps3966;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 2253672 2253698 . ? . description=trf chr3 . repeat_region 2254116 2254141 . ? . description=trf chr3 . repeat_region 2256795 2256823 . ? . description=trf chr3 . repeat_region 2256795 2256835 . ? . description=dust chr3 ensembl protein_coding_gene 2251131 2252846 . + . ID=Thaps22017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWH1];external_name=Thaps22017;logic_name=jgi_thaps3 chr3 ensembl transcript 2251131 2252846 . + . ID=Thaps22017;Parent=Thaps22017;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2251131 2252846 . + 0 ID=Thaps22017;Parent=Thaps22017;rank=1 chr3 . exon 2251131 2252846 . + . ID=Thaps22017.1;Parent=Thaps22017;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2253128 2255050 . - . ID=Thaps22018;biotype=protein_coding;description=Putative uncharacterized protein HSF40 [Source:UniProtKB/TrEMBL%3BAcc:B8BWH2];external_name=HSF40;logic_name=jgi_thaps3 chr3 ensembl transcript 2253128 2255050 . - . ID=Thaps22018;Parent=Thaps22018;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2253128 2254029 . - 0 ID=Thaps22018;Parent=Thaps22018;rank=2 chr3 . exon 2253128 2254029 . - . ID=Thaps22018.2;Parent=Thaps22018;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2254051 2255050 . - 0 ID=Thaps22018;Parent=Thaps22018;rank=1 chr3 . exon 2254051 2255050 . - . ID=Thaps22018.1;Parent=Thaps22018;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2260069 2261460 . + . ID=Thaps261963;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWH5];external_name=Thaps261963;logic_name=jgi_thaps3 chr3 ensembl transcript 2260069 2261460 . + . ID=Thaps261963;Parent=Thaps261963;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2260069 2260674 . + 0 ID=Thaps261963;Parent=Thaps261963;rank=1 chr3 . exon 2260069 2260674 . + . ID=Thaps261963.1;Parent=Thaps261963;constitutive=1;rank=1 chr3 . CDS 2260945 2261460 . + 0 ID=Thaps261963;Parent=Thaps261963;rank=2 chr3 ensembl protein_coding_gene 2259214 2259582 . + . ID=Thaps268574;biotype=protein_coding;description=Tim22-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWH4];external_name=Thaps268574;logic_name=jgi_thaps3 chr3 ensembl transcript 2259214 2259582 . + . ID=Thaps268574;Parent=Thaps268574;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2259214 2259291 . + 0 ID=Thaps268574;Parent=Thaps268574;rank=1 chr3 . exon 2259214 2259291 . + . ID=Thaps268574.1;Parent=Thaps268574;constitutive=1;rank=1 chr3 . CDS 2259316 2259582 . + 0 ID=Thaps268574;Parent=Thaps268574;rank=2 chr3 . exon 2259316 2259582 . + . ID=Thaps268574.2;Parent=Thaps268574;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2255635 2258286 . - . ID=Thaps3970;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWH3];external_name=Thaps3970;logic_name=jgi_thaps3 chr3 ensembl transcript 2255635 2258286 . - . ID=Thaps3970;Parent=Thaps3970;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2255635 2258286 . - 0 ID=Thaps3970;Parent=Thaps3970;rank=1 chr3 . exon 2255635 2258286 . - . ID=Thaps3970.1;Parent=Thaps3970;constitutive=1;rank=1 chr3 . exon 2260945 2261460 . + . ID=Thaps261963.2;Parent=Thaps261963;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2266388 2266750 . - . ID=Thaps261965;biotype=protein_coding;description=Putative uncharacterized protein HSF41 [Source:UniProtKB/TrEMBL%3BAcc:B8BWH9];external_name=HSF41;logic_name=jgi_thaps3 chr3 ensembl transcript 2266388 2266750 . - . ID=Thaps261965;Parent=Thaps261965;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2266388 2266480 . - 0 ID=Thaps261965;Parent=Thaps261965;rank=2 chr3 . exon 2266388 2266480 . - . ID=Thaps261965.2;Parent=Thaps261965;constitutive=1;rank=2 chr3 . CDS 2266560 2266750 . - 0 ID=Thaps261965;Parent=Thaps261965;rank=1 chr3 . exon 2266560 2266750 . - . ID=Thaps261965.1;Parent=Thaps261965;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2270662 2271966 . - . ID=Thaps261966;biotype=protein_coding;description=Sulfide:quinone oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8BWI1];external_name=Thaps261966;logic_name=jgi_thaps3 chr3 ensembl transcript 2270662 2271966 . - . ID=Thaps261966;Parent=Thaps261966;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2270662 2270900 . - 0 ID=Thaps261966;Parent=Thaps261966;rank=2 chr3 . exon 2270662 2270900 . - . ID=Thaps261966.2;Parent=Thaps261966;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2270934 2271966 . - 0 ID=Thaps261966;Parent=Thaps261966;rank=1 chr3 ensembl protein_coding_gene 2262066 2263686 . + . ID=Thaps3973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWH6];external_name=Thaps3973;logic_name=jgi_thaps3 chr3 ensembl transcript 2262066 2263686 . + . ID=Thaps3973;Parent=Thaps3973;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2262066 2262584 . + 0 ID=Thaps3973;Parent=Thaps3973;rank=1 chr3 . exon 2262066 2262584 . + . ID=Thaps3973.1;Parent=Thaps3973;constitutive=1;rank=1 chr3 . CDS 2262724 2263686 . + 0 ID=Thaps3973;Parent=Thaps3973;rank=2 chr3 . exon 2262724 2263686 . + . ID=Thaps3973.2;Parent=Thaps3973;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2263966 2265177 . - . ID=Thaps3974;biotype=protein_coding;description=Uroporphyrinogen decarboxylase [Source:UniProtKB/TrEMBL%3BAcc:B8BWH7];external_name=UROD2;logic_name=jgi_thaps3 chr3 ensembl transcript 2263966 2265177 . - . ID=Thaps3974;Parent=Thaps3974;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2263966 2265177 . - 0 ID=Thaps3974;Parent=Thaps3974;rank=1 chr3 . exon 2263966 2265177 . - . ID=Thaps3974.1;Parent=Thaps3974;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2265745 2266200 . - . ID=Thaps3975;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWH8];external_name=Thaps3975;logic_name=jgi_thaps3 chr3 ensembl transcript 2265745 2266200 . - . ID=Thaps3975;Parent=Thaps3975;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2265745 2266200 . - 0 ID=Thaps3975;Parent=Thaps3975;rank=1 chr3 . exon 2265745 2266200 . - . ID=Thaps3975.1;Parent=Thaps3975;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2267584 2269956 . - . ID=Thaps3976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWI0];external_name=Thaps3976;logic_name=jgi_thaps3 chr3 ensembl transcript 2267584 2269956 . - . ID=Thaps3976;Parent=Thaps3976;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2267584 2269956 . - 0 ID=Thaps3976;Parent=Thaps3976;rank=1 chr3 . exon 2267584 2269956 . - . ID=Thaps3976.1;Parent=Thaps3976;constitutive=1;rank=1 chr3 . repeat_region 2275679 2275721 . ? . description=trf chr3 . repeat_region 2277485 2277504 . ? . description=trf chr3 . repeat_region 2277485 2277536 . ? . description=dust chr3 . repeat_region 2279024 2279130 . ? . description=trf chr3 . repeat_region 2279024 2279130 . ? . description=dust chr3 ensembl protein_coding_gene 2272501 2274921 . + . ID=Thaps22021;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWI2];external_name=Thaps22021;logic_name=jgi_thaps3 chr3 ensembl transcript 2272501 2274921 . + . ID=Thaps22021;Parent=Thaps22021;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2272501 2274921 . + 0 ID=Thaps22021;Parent=Thaps22021;rank=1 chr3 . exon 2272501 2274921 . + . ID=Thaps22021.1;Parent=Thaps22021;constitutive=1;rank=1 chr3 . exon 2270934 2271966 . - . ID=Thaps261966.1;Parent=Thaps261966;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2275395 2277020 . + . ID=Thaps3979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWI3];external_name=Thaps3979;logic_name=jgi_thaps3 chr3 ensembl transcript 2275395 2277020 . + . ID=Thaps3979;Parent=Thaps3979;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2275395 2277020 . + 0 ID=Thaps3979;Parent=Thaps3979;rank=1 chr3 . exon 2275395 2277020 . + . ID=Thaps3979.1;Parent=Thaps3979;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2277383 2278882 . + . ID=Thaps3980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWI4];external_name=Thaps3980;logic_name=jgi_thaps3 chr3 ensembl transcript 2277383 2278882 . + . ID=Thaps3980;Parent=Thaps3980;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2277383 2278882 . + 0 ID=Thaps3980;Parent=Thaps3980;rank=1 chr3 . exon 2277383 2278882 . + . ID=Thaps3980.1;Parent=Thaps3980;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2279274 2280752 . - . ID=Thaps3981;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWI5];external_name=Thaps3981;logic_name=jgi_thaps3 chr3 ensembl transcript 2279274 2280752 . - . ID=Thaps3981;Parent=Thaps3981;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2279274 2280752 . - 0 ID=Thaps3981;Parent=Thaps3981;rank=1 chr3 . exon 2279274 2280752 . - . ID=Thaps3981.1;Parent=Thaps3981;constitutive=1;rank=1 chr3 . repeat_region 2282208 2282274 . + . description=Copia8LTR_TP chr3 ensembl protein_coding_gene 2287976 2291986 . + . ID=Thaps22023;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWI8];external_name=Thaps22023;logic_name=jgi_thaps3 chr3 ensembl transcript 2287976 2291986 . + . ID=Thaps22023;Parent=Thaps22023;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2287976 2288395 . + 0 ID=Thaps22023;Parent=Thaps22023;rank=1 chr3 . exon 2287976 2288395 . + . ID=Thaps22023.1;Parent=Thaps22023;constitutive=1;rank=1 chr3 . CDS 2288435 2290541 . + 0 ID=Thaps22023;Parent=Thaps22023;rank=2 chr3 . exon 2288435 2290541 . + . ID=Thaps22023.2;Parent=Thaps22023;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2290605 2290914 . + 0 ID=Thaps22023;Parent=Thaps22023;rank=3 chr3 . exon 2290605 2290914 . + . ID=Thaps22023.3;Parent=Thaps22023;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 2290996 2291986 . + 0 ID=Thaps22023;Parent=Thaps22023;rank=4 chr3 ensembl protein_coding_gene 2282287 2282496 . + . ID=Thaps261967;biotype=protein_coding;description=Putative uncharacterized protein HBP7 [Source:UniProtKB/TrEMBL%3BAcc:B8BWI6];external_name=HBP7;logic_name=jgi_thaps3 chr3 ensembl transcript 2282287 2282496 . + . ID=Thaps261967;Parent=Thaps261967;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2282287 2282496 . + 0 ID=Thaps261967;Parent=Thaps261967;rank=1 chr3 . exon 2282287 2282496 . + . ID=Thaps261967.1;Parent=Thaps261967;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2284871 2285806 . + . ID=Thaps33182;biotype=protein_coding;description=Chk2%2C checkpoint kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BWI7];external_name=Thaps33182;logic_name=jgi_thaps3 chr3 ensembl transcript 2284871 2285806 . + . ID=Thaps33182;Parent=Thaps33182;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2284871 2285500 . + 0 ID=Thaps33182;Parent=Thaps33182;rank=1 chr3 . exon 2284871 2285500 . + . ID=Thaps33182.1;Parent=Thaps33182;constitutive=1;rank=1 chr3 . CDS 2285588 2285806 . + 0 ID=Thaps33182;Parent=Thaps33182;rank=2 chr3 . exon 2285588 2285806 . + . ID=Thaps33182.2;Parent=Thaps33182;constitutive=1;rank=2 chr3 . exon 2290996 2291986 . + . ID=Thaps22023.4;Parent=Thaps22023;constitutive=1;ensembl_end_phase=1;rank=4 chr3 ensembl protein_coding_gene 2293913 2295989 . - . ID=Thaps22024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ0];external_name=Thaps22024;logic_name=jgi_thaps3 chr3 ensembl transcript 2293913 2295989 . - . ID=Thaps22024;Parent=Thaps22024;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2293913 2294145 . - 0 ID=Thaps22024;Parent=Thaps22024;rank=4 chr3 . exon 2293913 2294145 . - . ID=Thaps22024.4;Parent=Thaps22024;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . CDS 2294219 2294280 . - 0 ID=Thaps22024;Parent=Thaps22024;rank=3 chr3 . exon 2294219 2294280 . - . ID=Thaps22024.3;Parent=Thaps22024;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2294362 2295525 . - 0 ID=Thaps22024;Parent=Thaps22024;rank=2 chr3 . exon 2294362 2295525 . - . ID=Thaps22024.2;Parent=Thaps22024;constitutive=1;rank=2 chr3 . CDS 2295742 2295989 . - 0 ID=Thaps22024;Parent=Thaps22024;rank=1 chr3 . exon 2295742 2295989 . - . ID=Thaps22024.1;Parent=Thaps22024;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2298029 2298490 . - . ID=Thaps22025;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ2];external_name=Thaps22025;logic_name=jgi_thaps3 chr3 ensembl transcript 2298029 2298490 . - . ID=Thaps22025;Parent=Thaps22025;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2298029 2298337 . - 0 ID=Thaps22025;Parent=Thaps22025;rank=2 chr3 . exon 2298029 2298337 . - . ID=Thaps22025.2;Parent=Thaps22025;constitutive=1;rank=2 chr3 . CDS 2298449 2298490 . - 0 ID=Thaps22025;Parent=Thaps22025;rank=1 chr3 . exon 2298449 2298490 . - . ID=Thaps22025.1;Parent=Thaps22025;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2298697 2300936 . + . ID=Thaps22026;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ3];external_name=Thaps22026;logic_name=jgi_thaps3 chr3 ensembl transcript 2298697 2300936 . + . ID=Thaps22026;Parent=Thaps22026;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2298697 2300424 . + 0 ID=Thaps22026;Parent=Thaps22026;rank=1 chr3 . exon 2298697 2300424 . + . ID=Thaps22026.1;Parent=Thaps22026;constitutive=1;rank=1 chr3 . CDS 2300508 2300936 . + 0 ID=Thaps22026;Parent=Thaps22026;rank=2 chr3 . exon 2300508 2300936 . + . ID=Thaps22026.2;Parent=Thaps22026;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2292083 2292674 . - . ID=Thaps261971;biotype=protein_coding;description=Ankyrn related animal-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWI9];external_name=Thaps261971;logic_name=jgi_thaps3 chr3 ensembl transcript 2292083 2292674 . - . ID=Thaps261971;Parent=Thaps261971;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2292083 2292674 . - 0 ID=Thaps261971;Parent=Thaps261971;rank=1 chr3 . exon 2292083 2292674 . - . ID=Thaps261971.1;Parent=Thaps261971;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2296276 2297856 . + . ID=Thaps3987;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ1];external_name=Thaps3987;logic_name=jgi_thaps3 chr3 ensembl transcript 2296276 2297856 . + . ID=Thaps3987;Parent=Thaps3987;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2296276 2297856 . + 0 ID=Thaps3987;Parent=Thaps3987;rank=1 chr3 . exon 2296276 2297856 . + . ID=Thaps3987.1;Parent=Thaps3987;constitutive=1;rank=1 chr3 . repeat_region 2301673 2301680 . ? . description=dust chr3 ensembl protein_coding_gene 2310104 2310691 . - . ID=Thaps17002;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ7];external_name=Thaps17002;logic_name=jgi_thaps3 chr3 ensembl transcript 2310104 2310691 . - . ID=Thaps17002;Parent=Thaps17002;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2310104 2310691 . - 0 ID=Thaps17002;Parent=Thaps17002;rank=1 chr3 . exon 2310104 2310691 . - . ID=Thaps17002.1;Parent=Thaps17002;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2307863 2309218 . - . ID=Thaps22027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ6];external_name=Thaps22027;logic_name=jgi_thaps3 chr3 ensembl transcript 2307863 2309218 . - . ID=Thaps22027;Parent=Thaps22027;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2307863 2309218 . - 0 ID=Thaps22027;Parent=Thaps22027;rank=1 chr3 . exon 2307863 2309218 . - . ID=Thaps22027.1;Parent=Thaps22027;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2303097 2304154 . + . ID=Thaps261973;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ5];external_name=Thaps261973;logic_name=jgi_thaps3 chr3 ensembl transcript 2303097 2304154 . + . ID=Thaps261973;Parent=Thaps261973;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2303097 2303651 . + 0 ID=Thaps261973;Parent=Thaps261973;rank=1 chr3 . exon 2303097 2303651 . + . ID=Thaps261973.1;Parent=Thaps261973;constitutive=1;rank=1 chr3 . CDS 2303735 2304154 . + 0 ID=Thaps261973;Parent=Thaps261973;rank=2 chr3 . exon 2303735 2304154 . + . ID=Thaps261973.2;Parent=Thaps261973;constitutive=1;rank=2 chr3 ensembl gene 2305655 2306955 . - . ID=Thaps261974;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 2305655 2306955 . - . ID=Thaps261974;Parent=Thaps261974;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 2305655 2306955 . - . ID=Thaps261974.1;Parent=Thaps261974;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2301816 2302700 . + . ID=Thaps32704;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ4];external_name=Thaps32704;logic_name=jgi_thaps3 chr3 ensembl transcript 2301816 2302700 . + . ID=Thaps32704;Parent=Thaps32704;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2301816 2302700 . + 0 ID=Thaps32704;Parent=Thaps32704;rank=1 chr3 . exon 2301816 2302700 . + . ID=Thaps32704.1;Parent=Thaps32704;constitutive=1;rank=1 chr3 . repeat_region 2317263 2317317 . ? . description=trf chr3 ensembl protein_coding_gene 2316170 2317153 . + . ID=Thaps22030;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ9];external_name=Thaps22030;logic_name=jgi_thaps3 chr3 ensembl transcript 2316170 2317153 . + . ID=Thaps22030;Parent=Thaps22030;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2316170 2316241 . + 0 ID=Thaps22030;Parent=Thaps22030;rank=1 chr3 . exon 2316170 2316241 . + . ID=Thaps22030.1;Parent=Thaps22030;constitutive=1;rank=1 chr3 . CDS 2316338 2317153 . + 0 ID=Thaps22030;Parent=Thaps22030;rank=2 chr3 . exon 2316338 2317153 . + . ID=Thaps22030.2;Parent=Thaps22030;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2317377 2318886 . - . ID=Thaps22031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK0];external_name=Thaps22031;logic_name=jgi_thaps3 chr3 ensembl transcript 2317377 2318886 . - . ID=Thaps22031;Parent=Thaps22031;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2317377 2317403 . - 0 ID=Thaps22031;Parent=Thaps22031;rank=2 chr3 . exon 2317377 2317403 . - . ID=Thaps22031.2;Parent=Thaps22031;constitutive=1;rank=2 chr3 . CDS 2317459 2318886 . - 0 ID=Thaps22031;Parent=Thaps22031;rank=1 chr3 . exon 2317459 2318886 . - . ID=Thaps22031.1;Parent=Thaps22031;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2319238 2320053 . + . ID=Thaps22032;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK1];external_name=Thaps22032;logic_name=jgi_thaps3 chr3 ensembl transcript 2319238 2320053 . + . ID=Thaps22032;Parent=Thaps22032;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2319238 2320053 . + 0 ID=Thaps22032;Parent=Thaps22032;rank=1 chr3 . exon 2319238 2320053 . + . ID=Thaps22032.1;Parent=Thaps22032;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2313930 2314541 . + . ID=Thaps32805;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWJ8];external_name=Thaps32805;logic_name=jgi_thaps3 chr3 ensembl transcript 2313930 2314541 . + . ID=Thaps32805;Parent=Thaps32805;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2313930 2314541 . + 0 ID=Thaps32805;Parent=Thaps32805;rank=1 chr3 . exon 2313930 2314541 . + . ID=Thaps32805.1;Parent=Thaps32805;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2322946 2323641 . + . ID=Thaps22033;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK3];external_name=Thaps22033;logic_name=jgi_thaps3 chr3 ensembl transcript 2322946 2323641 . + . ID=Thaps22033;Parent=Thaps22033;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2322946 2323641 . + 0 ID=Thaps22033;Parent=Thaps22033;rank=1 chr3 . exon 2322946 2323641 . + . ID=Thaps22033.1;Parent=Thaps22033;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2330287 2332812 . + . ID=Thaps22036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK7];external_name=Thaps22036;logic_name=jgi_thaps3 chr3 ensembl transcript 2330287 2332812 . + . ID=Thaps22036;Parent=Thaps22036;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2330287 2332812 . + 0 ID=Thaps22036;Parent=Thaps22036;rank=1 chr3 . exon 2330287 2332812 . + . ID=Thaps22036.1;Parent=Thaps22036;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2327710 2328906 . + . ID=Thaps27686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK5];external_name=Thaps27686;logic_name=jgi_thaps3 chr3 ensembl transcript 2327710 2328906 . + . ID=Thaps27686;Parent=Thaps27686;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2327710 2328289 . + 0 ID=Thaps27686;Parent=Thaps27686;rank=1 chr3 . exon 2327710 2328289 . + . ID=Thaps27686.1;Parent=Thaps27686;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2328341 2328906 . + 0 ID=Thaps27686;Parent=Thaps27686;rank=2 chr3 . exon 2328341 2328906 . + . ID=Thaps27686.2;Parent=Thaps27686;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 2321029 2322144 . + . ID=Thaps3998;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK2];external_name=Thaps3998;logic_name=jgi_thaps3 chr3 ensembl transcript 2321029 2322144 . + . ID=Thaps3998;Parent=Thaps3998;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2321029 2322144 . + 0 ID=Thaps3998;Parent=Thaps3998;rank=1 chr3 . exon 2321029 2322144 . + . ID=Thaps3998.1;Parent=Thaps3998;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2324197 2326157 . - . ID=Thaps4000;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK4];external_name=Thaps4000;logic_name=jgi_thaps3 chr3 ensembl transcript 2324197 2326157 . - . ID=Thaps4000;Parent=Thaps4000;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2324197 2324730 . - 0 ID=Thaps4000;Parent=Thaps4000;rank=4 chr3 . exon 2324197 2324730 . - . ID=Thaps4000.4;Parent=Thaps4000;constitutive=1;rank=4 chr3 . CDS 2324946 2325419 . - 0 ID=Thaps4000;Parent=Thaps4000;rank=3 chr3 . exon 2324946 2325419 . - . ID=Thaps4000.3;Parent=Thaps4000;constitutive=1;rank=3 chr3 . CDS 2325492 2325602 . - 0 ID=Thaps4000;Parent=Thaps4000;rank=2 chr3 . exon 2325492 2325602 . - . ID=Thaps4000.2;Parent=Thaps4000;constitutive=1;rank=2 chr3 . CDS 2325681 2326157 . - 0 ID=Thaps4000;Parent=Thaps4000;rank=1 chr3 . exon 2325681 2326157 . - . ID=Thaps4000.1;Parent=Thaps4000;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2329042 2329950 . - . ID=Thaps4002;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK6];external_name=Thaps4002;logic_name=jgi_thaps3 chr3 ensembl transcript 2329042 2329950 . - . ID=Thaps4002;Parent=Thaps4002;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2329042 2329950 . - 0 ID=Thaps4002;Parent=Thaps4002;rank=1 chr3 . exon 2329042 2329950 . - . ID=Thaps4002.1;Parent=Thaps4002;constitutive=1;rank=1 chr3 . repeat_region 2338026 2338063 . ? . description=trf chr3 . repeat_region 2338363 2338393 . ? . description=trf chr3 . repeat_region 2338372 2338393 . ? . description=dust chr3 ensembl protein_coding_gene 2336517 2336837 . + . ID=Thaps17919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWL0];external_name=Thaps17919;logic_name=jgi_thaps3 chr3 ensembl transcript 2336517 2336837 . + . ID=Thaps17919;Parent=Thaps17919;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2336517 2336837 . + 0 ID=Thaps17919;Parent=Thaps17919;rank=1 chr3 . exon 2336517 2336837 . + . ID=Thaps17919.1;Parent=Thaps17919;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2332985 2333739 . - . ID=Thaps268576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK8];external_name=Thaps268576;logic_name=jgi_thaps3 chr3 ensembl transcript 2332985 2333739 . - . ID=Thaps268576;Parent=Thaps268576;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2332985 2333238 . - 0 ID=Thaps268576;Parent=Thaps268576;rank=3 chr3 . exon 2332985 2333238 . - . ID=Thaps268576.3;Parent=Thaps268576;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2333366 2333475 . - 0 ID=Thaps268576;Parent=Thaps268576;rank=2 chr3 . exon 2333366 2333475 . - . ID=Thaps268576.2;Parent=Thaps268576;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2333555 2333739 . - 0 ID=Thaps268576;Parent=Thaps268576;rank=1 chr3 . exon 2333555 2333739 . - . ID=Thaps268576.1;Parent=Thaps268576;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2337309 2338640 . - . ID=Thaps268577;biotype=protein_coding;description=RAB geranylgeranyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BWL1];external_name=GGTA1;logic_name=jgi_thaps3 chr3 ensembl transcript 2337309 2338640 . - . ID=Thaps268577;Parent=Thaps268577;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2337309 2337709 . - 0 ID=Thaps268577;Parent=Thaps268577;rank=5 chr3 . exon 2337309 2337709 . - . ID=Thaps268577.5;Parent=Thaps268577;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . CDS 2337791 2337962 . - 0 ID=Thaps268577;Parent=Thaps268577;rank=4 chr3 . exon 2337791 2337962 . - . ID=Thaps268577.4;Parent=Thaps268577;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 2338095 2338164 . - 0 ID=Thaps268577;Parent=Thaps268577;rank=3 chr3 . exon 2338095 2338164 . - . ID=Thaps268577.3;Parent=Thaps268577;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 2338216 2338344 . - 0 ID=Thaps268577;Parent=Thaps268577;rank=2 chr3 . exon 2338216 2338344 . - . ID=Thaps268577.2;Parent=Thaps268577;constitutive=1;rank=2 chr3 . CDS 2338402 2338640 . - 0 ID=Thaps268577;Parent=Thaps268577;rank=1 chr3 . exon 2338402 2338640 . - . ID=Thaps268577.1;Parent=Thaps268577;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2334623 2335954 . + . ID=Thaps27688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWK9];external_name=Thaps27688;logic_name=jgi_thaps3 chr3 ensembl transcript 2334623 2335954 . + . ID=Thaps27688;Parent=Thaps27688;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2334623 2335129 . + 0 ID=Thaps27688;Parent=Thaps27688;rank=1 chr3 . exon 2334623 2335129 . + . ID=Thaps27688.1;Parent=Thaps27688;constitutive=1;rank=1 chr3 . CDS 2335223 2335954 . + 0 ID=Thaps27688;Parent=Thaps27688;rank=2 chr3 . exon 2335223 2335954 . + . ID=Thaps27688.2;Parent=Thaps27688;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2339176 2340450 . + . ID=Thaps4006;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWL2];external_name=Thaps4006;logic_name=jgi_thaps3 chr3 ensembl transcript 2339176 2340450 . + . ID=Thaps4006;Parent=Thaps4006;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2339176 2340450 . + 0 ID=Thaps4006;Parent=Thaps4006;rank=1 chr3 . exon 2339176 2340450 . + . ID=Thaps4006.1;Parent=Thaps4006;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2346481 2348153 . - . ID=Thaps22041;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWL5];external_name=Thaps22041;logic_name=jgi_thaps3 chr3 ensembl transcript 2346481 2348153 . - . ID=Thaps22041;Parent=Thaps22041;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2346481 2346501 . - 0 ID=Thaps22041;Parent=Thaps22041;rank=3 chr3 . exon 2346481 2346501 . - . ID=Thaps22041.3;Parent=Thaps22041;constitutive=1;rank=3 chr3 . CDS 2346579 2346700 . - 0 ID=Thaps22041;Parent=Thaps22041;rank=2 chr3 . exon 2346579 2346700 . - . ID=Thaps22041.2;Parent=Thaps22041;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2346785 2348153 . - 0 ID=Thaps22041;Parent=Thaps22041;rank=1 chr3 . exon 2346785 2348153 . - . ID=Thaps22041.1;Parent=Thaps22041;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2350273 2351710 . - . ID=Thaps22042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWL7];external_name=Thaps22042;logic_name=jgi_thaps3 chr3 ensembl transcript 2350273 2351710 . - . ID=Thaps22042;Parent=Thaps22042;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2350273 2350370 . - 0 ID=Thaps22042;Parent=Thaps22042;rank=2 chr3 . exon 2350273 2350370 . - . ID=Thaps22042.2;Parent=Thaps22042;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2350441 2351710 . - 0 ID=Thaps22042;Parent=Thaps22042;rank=1 chr3 . exon 2350441 2351710 . - . ID=Thaps22042.1;Parent=Thaps22042;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2343285 2344150 . + . ID=Thaps261979;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWL4];external_name=Thaps261979;logic_name=jgi_thaps3 chr3 ensembl transcript 2343285 2344150 . + . ID=Thaps261979;Parent=Thaps261979;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2343285 2343645 . + 0 ID=Thaps261979;Parent=Thaps261979;rank=1 chr3 . exon 2343285 2343645 . + . ID=Thaps261979.1;Parent=Thaps261979;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2343739 2344150 . + 0 ID=Thaps261979;Parent=Thaps261979;rank=2 chr3 . exon 2343739 2344150 . + . ID=Thaps261979.2;Parent=Thaps261979;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 2348934 2349842 . + . ID=Thaps33055;biotype=protein_coding;description=Arogenate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BWL6];external_name=Thaps33055;logic_name=jgi_thaps3 chr3 ensembl transcript 2348934 2349842 . + . ID=Thaps33055;Parent=Thaps33055;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2348934 2349382 . + 0 ID=Thaps33055;Parent=Thaps33055;rank=1 chr3 . exon 2348934 2349382 . + . ID=Thaps33055.1;Parent=Thaps33055;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2349485 2349842 . + 0 ID=Thaps33055;Parent=Thaps33055;rank=2 chr3 . exon 2349485 2349842 . + . ID=Thaps33055.2;Parent=Thaps33055;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 2340627 2341775 . - . ID=Thaps4007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWL3];external_name=Thaps4007;logic_name=jgi_thaps3 chr3 ensembl transcript 2340627 2341775 . - . ID=Thaps4007;Parent=Thaps4007;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2340627 2341775 . - 0 ID=Thaps4007;Parent=Thaps4007;rank=1 chr3 . exon 2340627 2341775 . - . ID=Thaps4007.1;Parent=Thaps4007;constitutive=1;rank=1 chr3 . repeat_region 2359861 2359869 . ? . description=dust chr3 ensembl protein_coding_gene 2357165 2359711 . - . ID=Thaps22044;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWL9];external_name=Thaps22044;logic_name=jgi_thaps3 chr3 ensembl transcript 2357165 2359711 . - . ID=Thaps22044;Parent=Thaps22044;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2357165 2359711 . - 0 ID=Thaps22044;Parent=Thaps22044;rank=1 chr3 . exon 2357165 2359711 . - . ID=Thaps22044.1;Parent=Thaps22044;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2360200 2361462 . + . ID=Thaps22045;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWM0];external_name=Thaps22045;logic_name=jgi_thaps3 chr3 ensembl transcript 2360200 2361462 . + . ID=Thaps22045;Parent=Thaps22045;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2360200 2361462 . + 0 ID=Thaps22045;Parent=Thaps22045;rank=1 chr3 . exon 2360200 2361462 . + . ID=Thaps22045.1;Parent=Thaps22045;constitutive=1;rank=1 chr3 ensembl gene 2354543 2356538 . - . ID=Thaps261981;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr3 ensembl transcript 2354543 2356538 . - . ID=Thaps261981;Parent=Thaps261981;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr3 . exon 2354543 2355381 . - . ID=Thaps261981.5;Parent=Thaps261981;constitutive=1;ensembl_end_phase=2;rank=5 chr3 . exon 2355445 2355680 . - . ID=Thaps261981.4;Parent=Thaps261981;constitutive=1;ensembl_end_phase=2;rank=4 chr3 . exon 2355756 2355855 . - . ID=Thaps261981.3;Parent=Thaps261981;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 2355889 2355987 . - . ID=Thaps261981.2;Parent=Thaps261981;constitutive=1;rank=2 chr3 . exon 2356089 2356538 . - . ID=Thaps261981.1;Parent=Thaps261981;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2352236 2353144 . + . ID=Thaps4012;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWL8];external_name=Thaps4012;logic_name=jgi_thaps3 chr3 ensembl transcript 2352236 2353144 . + . ID=Thaps4012;Parent=Thaps4012;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2352236 2353144 . + 0 ID=Thaps4012;Parent=Thaps4012;rank=1 chr3 . exon 2352236 2353144 . + . ID=Thaps4012.1;Parent=Thaps4012;constitutive=1;rank=1 chr3 . repeat_region 2364488 2364508 . ? . description=trf chr3 ensembl protein_coding_gene 2365059 2366165 . - . ID=Thaps22046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWM3];external_name=Thaps22046;logic_name=jgi_thaps3 chr3 ensembl transcript 2365059 2366165 . - . ID=Thaps22046;Parent=Thaps22046;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2365059 2366165 . - 0 ID=Thaps22046;Parent=Thaps22046;rank=1 chr3 . exon 2365059 2366165 . - . ID=Thaps22046.1;Parent=Thaps22046;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2363051 2363731 . - . ID=Thaps4016;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWM1];external_name=Thaps4016;logic_name=jgi_thaps3 chr3 ensembl transcript 2363051 2363731 . - . ID=Thaps4016;Parent=Thaps4016;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2363051 2363731 . - 0 ID=Thaps4016;Parent=Thaps4016;rank=1 chr3 . exon 2363051 2363731 . - . ID=Thaps4016.1;Parent=Thaps4016;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2364074 2364709 . + . ID=Thaps4017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWM2];external_name=Thaps4017;logic_name=jgi_thaps3 chr3 ensembl transcript 2364074 2364709 . + . ID=Thaps4017;Parent=Thaps4017;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2364074 2364709 . + 0 ID=Thaps4017;Parent=Thaps4017;rank=1 chr3 . exon 2364074 2364709 . + . ID=Thaps4017.1;Parent=Thaps4017;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2366879 2368779 . + . ID=Thaps4019;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWM4];external_name=Thaps4019;logic_name=jgi_thaps3 chr3 ensembl transcript 2366879 2368779 . + . ID=Thaps4019;Parent=Thaps4019;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2366879 2367541 . + 0 ID=Thaps4019;Parent=Thaps4019;rank=1 chr3 . exon 2366879 2367541 . + . ID=Thaps4019.1;Parent=Thaps4019;constitutive=1;rank=1 chr3 . CDS 2367598 2367708 . + 0 ID=Thaps4019;Parent=Thaps4019;rank=2 chr3 . exon 2367598 2367708 . + . ID=Thaps4019.2;Parent=Thaps4019;constitutive=1;rank=2 chr3 . CDS 2367796 2368779 . + 0 ID=Thaps4019;Parent=Thaps4019;rank=3 chr3 . exon 2367796 2368779 . + . ID=Thaps4019.3;Parent=Thaps4019;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 2369494 2370453 . + . ID=Thaps4020;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWM5];external_name=Thaps4020;logic_name=jgi_thaps3 chr3 ensembl transcript 2369494 2370453 . + . ID=Thaps4020;Parent=Thaps4020;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2369494 2370453 . + 0 ID=Thaps4020;Parent=Thaps4020;rank=1 chr3 . exon 2369494 2370453 . + . ID=Thaps4020.1;Parent=Thaps4020;constitutive=1;rank=1 chr3 . repeat_region 2378169 2378193 . ? . description=dust chr3 ensembl protein_coding_gene 2373267 2379578 . + . ID=Thaps14875;biotype=protein_coding;description=Udp-n-acetylglucosamin-dolichyl-phosphate : n-acetylglucosamin-phosphate transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BWM8];external_name=Thaps14875;logic_name=jgi_thaps3 chr3 ensembl transcript 2373267 2379578 . + . ID=Thaps14875;Parent=Thaps14875;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2373267 2373409 . + 0 ID=Thaps14875;Parent=Thaps14875;rank=1 chr3 . exon 2373267 2373409 . + . ID=Thaps14875.1;Parent=Thaps14875;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2373507 2373597 . + 0 ID=Thaps14875;Parent=Thaps14875;rank=2 chr3 . exon 2373507 2373597 . + . ID=Thaps14875.2;Parent=Thaps14875;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2373715 2373913 . + 0 ID=Thaps14875;Parent=Thaps14875;rank=3 chr3 . exon 2373715 2373913 . + . ID=Thaps14875.3;Parent=Thaps14875;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 2378944 2379578 . + 0 ID=Thaps14875;Parent=Thaps14875;rank=4 chr3 . exon 2378944 2379578 . + . ID=Thaps14875.4;Parent=Thaps14875;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 2370704 2371042 . - . ID=Thaps261982;biotype=protein_coding;description=Acyl-coa-binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWM6];external_name=ACB1;logic_name=jgi_thaps3 chr3 ensembl transcript 2370704 2371042 . - . ID=Thaps261982;Parent=Thaps261982;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2370704 2371042 . - 0 ID=Thaps261982;Parent=Thaps261982;rank=1 chr3 . exon 2370704 2371042 . - . ID=Thaps261982.1;Parent=Thaps261982;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2372081 2372845 . - . ID=Thaps4022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWM7];external_name=Thaps4022;logic_name=jgi_thaps3 chr3 ensembl transcript 2372081 2372845 . - . ID=Thaps4022;Parent=Thaps4022;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2372081 2372845 . - 0 ID=Thaps4022;Parent=Thaps4022;rank=1 chr3 . exon 2372081 2372845 . - . ID=Thaps4022.1;Parent=Thaps4022;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2379704 2380117 . - . ID=Thaps4026;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWM9];external_name=Thaps4026;logic_name=jgi_thaps3 chr3 ensembl transcript 2379704 2380117 . - . ID=Thaps4026;Parent=Thaps4026;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2379704 2380117 . - 0 ID=Thaps4026;Parent=Thaps4026;rank=1 chr3 . exon 2379704 2380117 . - . ID=Thaps4026.1;Parent=Thaps4026;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2380403 2381270 . + . ID=Thaps4027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWN0];external_name=Thaps4027;logic_name=jgi_thaps3 chr3 ensembl transcript 2380403 2381270 . + . ID=Thaps4027;Parent=Thaps4027;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2380403 2381270 . + 0 ID=Thaps4027;Parent=Thaps4027;rank=1 chr3 . exon 2380403 2381270 . + . ID=Thaps4027.1;Parent=Thaps4027;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . repeat_region 2388637 2388658 . ? . description=trf chr3 ensembl protein_coding_gene 2383067 2384463 . + . ID=Thaps22049;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWN2];external_name=Thaps22049;logic_name=jgi_thaps3 chr3 ensembl transcript 2383067 2384463 . + . ID=Thaps22049;Parent=Thaps22049;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2383067 2383732 . + 0 ID=Thaps22049;Parent=Thaps22049;rank=1 chr3 . exon 2383067 2383732 . + . ID=Thaps22049.1;Parent=Thaps22049;constitutive=1;rank=1 chr3 . CDS 2383879 2384463 . + 0 ID=Thaps22049;Parent=Thaps22049;rank=2 chr3 . exon 2383879 2384463 . + . ID=Thaps22049.2;Parent=Thaps22049;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2381387 2382643 . + . ID=Thaps25944;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWN1];external_name=Thaps25944;logic_name=jgi_thaps3 chr3 ensembl transcript 2381387 2382643 . + . ID=Thaps25944;Parent=Thaps25944;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2381387 2382643 . + 0 ID=Thaps25944;Parent=Thaps25944;rank=1 chr3 . exon 2381387 2382643 . + . ID=Thaps25944.1;Parent=Thaps25944;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2387506 2388540 . + . ID=Thaps268581;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWN3];external_name=Thaps268581;logic_name=jgi_thaps3 chr3 ensembl transcript 2387506 2388540 . + . ID=Thaps268581;Parent=Thaps268581;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2387506 2387703 . + 0 ID=Thaps268581;Parent=Thaps268581;rank=1 chr3 . exon 2387506 2387703 . + . ID=Thaps268581.1;Parent=Thaps268581;constitutive=1;rank=1 chr3 . CDS 2387787 2387992 . + 0 ID=Thaps268581;Parent=Thaps268581;rank=2 chr3 . exon 2387787 2387992 . + . ID=Thaps268581.2;Parent=Thaps268581;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2388082 2388307 . + 0 ID=Thaps268581;Parent=Thaps268581;rank=3 chr3 . exon 2388082 2388307 . + . ID=Thaps268581.3;Parent=Thaps268581;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 2388406 2388540 . + 0 ID=Thaps268581;Parent=Thaps268581;rank=4 chr3 . exon 2388406 2388540 . + . ID=Thaps268581.4;Parent=Thaps268581;constitutive=1;rank=4 chr3 . repeat_region 2390411 2390469 . ? . description=dust chr3 ensembl protein_coding_gene 2400239 2401401 . - . ID=Thaps16440;biotype=protein_coding;description=RP3A%2C-like protein to dna-directed RNA polymerase II third largest subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BWN8];external_name=RP3A;logic_name=jgi_thaps3 chr3 ensembl transcript 2400239 2401401 . - . ID=Thaps16440;Parent=Thaps16440;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2400239 2400760 . - 0 ID=Thaps16440;Parent=Thaps16440;rank=3 chr3 . exon 2400239 2400760 . - . ID=Thaps16440.3;Parent=Thaps16440;constitutive=1;rank=3 chr3 . CDS 2400856 2400988 . - 0 ID=Thaps16440;Parent=Thaps16440;rank=2 chr3 . CDS 2401166 2401401 . - 0 ID=Thaps16440;Parent=Thaps16440;rank=1 chr3 ensembl protein_coding_gene 2393986 2395242 . - . ID=Thaps22052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWN5];external_name=Thaps22052;logic_name=jgi_thaps3 chr3 ensembl transcript 2393986 2395242 . - . ID=Thaps22052;Parent=Thaps22052;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2393986 2395242 . - 0 ID=Thaps22052;Parent=Thaps22052;rank=1 chr3 . exon 2393986 2395242 . - . ID=Thaps22052.1;Parent=Thaps22052;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2391381 2393038 . + . ID=Thaps268582;biotype=protein_coding;description=Probable DNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BWN4];external_name=DHC2;logic_name=jgi_thaps3 chr3 ensembl transcript 2391381 2393038 . + . ID=Thaps268582;Parent=Thaps268582;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2391381 2392236 . + 0 ID=Thaps268582;Parent=Thaps268582;rank=1 chr3 . exon 2391381 2392236 . + . ID=Thaps268582.1;Parent=Thaps268582;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2392326 2392714 . + 0 ID=Thaps268582;Parent=Thaps268582;rank=2 chr3 . exon 2392326 2392714 . + . ID=Thaps268582.2;Parent=Thaps268582;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2392730 2393038 . + 0 ID=Thaps268582;Parent=Thaps268582;rank=3 chr3 . exon 2392730 2393038 . + . ID=Thaps268582.3;Parent=Thaps268582;constitutive=1;rank=3 chr3 ensembl protein_coding_gene 2396153 2397086 . + . ID=Thaps4033;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWN6];external_name=Thaps4033;logic_name=jgi_thaps3 chr3 ensembl transcript 2396153 2397086 . + . ID=Thaps4033;Parent=Thaps4033;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2396153 2396192 . + 0 ID=Thaps4033;Parent=Thaps4033;rank=1 chr3 . exon 2396153 2396192 . + . ID=Thaps4033.1;Parent=Thaps4033;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2396278 2396306 . + 0 ID=Thaps4033;Parent=Thaps4033;rank=2 chr3 . exon 2396278 2396306 . + . ID=Thaps4033.2;Parent=Thaps4033;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2396401 2396914 . + 0 ID=Thaps4033;Parent=Thaps4033;rank=3 chr3 . exon 2396401 2396914 . + . ID=Thaps4033.3;Parent=Thaps4033;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 2397001 2397086 . + 0 ID=Thaps4033;Parent=Thaps4033;rank=4 chr3 . exon 2397001 2397086 . + . ID=Thaps4033.4;Parent=Thaps4033;constitutive=1;ensembl_end_phase=2;rank=4 chr3 ensembl protein_coding_gene 2398563 2399590 . - . ID=Thaps4034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWN7];external_name=Thaps4034;logic_name=jgi_thaps3 chr3 ensembl transcript 2398563 2399590 . - . ID=Thaps4034;Parent=Thaps4034;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2398563 2399133 . - 0 ID=Thaps4034;Parent=Thaps4034;rank=2 chr3 . exon 2398563 2399133 . - . ID=Thaps4034.2;Parent=Thaps4034;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2399220 2399590 . - 0 ID=Thaps4034;Parent=Thaps4034;rank=1 chr3 . exon 2399220 2399590 . - . ID=Thaps4034.1;Parent=Thaps4034;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . repeat_region 2401839 2401866 . ? . description=trf chr3 . repeat_region 2408027 2408119 . ? . description=trf chr3 . repeat_region 2409623 2409656 . ? . description=trf chr3 . repeat_region 2409964 2409991 . ? . description=trf chr3 . exon 2400856 2400988 . - . ID=Thaps16440.2;Parent=Thaps16440;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . exon 2401166 2401401 . - . ID=Thaps16440.1;Parent=Thaps16440;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2408872 2410021 . - . ID=Thaps22056;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP1];external_name=Thaps22056;logic_name=jgi_thaps3 chr3 ensembl transcript 2408872 2410021 . - . ID=Thaps22056;Parent=Thaps22056;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2408872 2408930 . - 0 ID=Thaps22056;Parent=Thaps22056;rank=8 chr3 . exon 2408872 2408930 . - . ID=Thaps22056.8;Parent=Thaps22056;constitutive=1;ensembl_end_phase=2;rank=8 chr3 . CDS 2409030 2409056 . - 0 ID=Thaps22056;Parent=Thaps22056;rank=7 chr3 . exon 2409030 2409056 . - . ID=Thaps22056.7;Parent=Thaps22056;constitutive=1;rank=7 chr3 . CDS 2409154 2409258 . - 0 ID=Thaps22056;Parent=Thaps22056;rank=6 chr3 . exon 2409154 2409258 . - . ID=Thaps22056.6;Parent=Thaps22056;constitutive=1;rank=6 chr3 . CDS 2409341 2409370 . - 0 ID=Thaps22056;Parent=Thaps22056;rank=5 chr3 . exon 2409341 2409370 . - . ID=Thaps22056.5;Parent=Thaps22056;constitutive=1;rank=5 chr3 . CDS 2409459 2409479 . - 0 ID=Thaps22056;Parent=Thaps22056;rank=4 chr3 . exon 2409459 2409479 . - . ID=Thaps22056.4;Parent=Thaps22056;constitutive=1;rank=4 chr3 . CDS 2409600 2409664 . - 0 ID=Thaps22056;Parent=Thaps22056;rank=3 chr3 . exon 2409600 2409664 . - . ID=Thaps22056.3;Parent=Thaps22056;constitutive=1;ensembl_end_phase=2;rank=3 chr3 . CDS 2409766 2409832 . - 0 ID=Thaps22056;Parent=Thaps22056;rank=2 chr3 . exon 2409766 2409832 . - . ID=Thaps22056.2;Parent=Thaps22056;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2409946 2410021 . - 0 ID=Thaps22056;Parent=Thaps22056;rank=1 chr3 . exon 2409946 2410021 . - . ID=Thaps22056.1;Parent=Thaps22056;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2402842 2404062 . + . ID=Thaps32996;biotype=protein_coding;description=tRNA-dihydrouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BWN9];external_name=Thaps32996;logic_name=jgi_thaps3 chr3 ensembl transcript 2402842 2404062 . + . ID=Thaps32996;Parent=Thaps32996;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2402842 2403840 . + 0 ID=Thaps32996;Parent=Thaps32996;rank=1 chr3 . exon 2402842 2403840 . + . ID=Thaps32996.1;Parent=Thaps32996;constitutive=1;rank=1 chr3 . CDS 2403925 2404062 . + 0 ID=Thaps32996;Parent=Thaps32996;rank=2 chr3 . exon 2403925 2404062 . + . ID=Thaps32996.2;Parent=Thaps32996;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2404616 2408662 . + . ID=Thaps4038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP0];external_name=Thaps4038;logic_name=jgi_thaps3 chr3 ensembl transcript 2404616 2408662 . + . ID=Thaps4038;Parent=Thaps4038;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2404616 2408662 . + 0 ID=Thaps4038;Parent=Thaps4038;rank=1 chr3 . exon 2404616 2408662 . + . ID=Thaps4038.1;Parent=Thaps4038;constitutive=1;rank=1 chr3 . repeat_region 2410771 2410808 . ? . description=dust chr3 . repeat_region 2411687 2411732 . ? . description=dust chr3 . repeat_region 2414375 2414435 . ? . description=dust chr3 ensembl protein_coding_gene 2411135 2412122 . + . ID=Thaps4040;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP2];external_name=Thaps4040;logic_name=jgi_thaps3 chr3 ensembl transcript 2411135 2412122 . + . ID=Thaps4040;Parent=Thaps4040;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2411135 2411566 . + 0 ID=Thaps4040;Parent=Thaps4040;rank=1 chr3 . exon 2411135 2411566 . + . ID=Thaps4040.1;Parent=Thaps4040;constitutive=1;rank=1 chr3 . CDS 2411736 2412122 . + 0 ID=Thaps4040;Parent=Thaps4040;rank=2 chr3 . exon 2411736 2412122 . + . ID=Thaps4040.2;Parent=Thaps4040;constitutive=1;rank=2 chr3 ensembl protein_coding_gene 2412837 2415315 . - . ID=Thaps4041;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP3];external_name=Thaps4041;logic_name=jgi_thaps3 chr3 ensembl transcript 2412837 2415315 . - . ID=Thaps4041;Parent=Thaps4041;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2412837 2413208 . - 0 ID=Thaps4041;Parent=Thaps4041;rank=3 chr3 . exon 2412837 2413208 . - . ID=Thaps4041.3;Parent=Thaps4041;constitutive=1;rank=3 chr3 . CDS 2413325 2413970 . - 0 ID=Thaps4041;Parent=Thaps4041;rank=2 chr3 . exon 2413325 2413970 . - . ID=Thaps4041.2;Parent=Thaps4041;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2414105 2415315 . - 0 ID=Thaps4041;Parent=Thaps4041;rank=1 chr3 . exon 2414105 2415315 . - . ID=Thaps4041.1;Parent=Thaps4041;constitutive=1;ensembl_end_phase=2;rank=1 chr3 ensembl protein_coding_gene 2415827 2417514 . + . ID=Thaps4042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP4];external_name=Thaps4042;logic_name=jgi_thaps3 chr3 ensembl transcript 2415827 2417514 . + . ID=Thaps4042;Parent=Thaps4042;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2415827 2416653 . + 0 ID=Thaps4042;Parent=Thaps4042;rank=1 chr3 . exon 2415827 2416653 . + . ID=Thaps4042.1;Parent=Thaps4042;constitutive=1;ensembl_end_phase=2;rank=1 chr3 . CDS 2416764 2417514 . + 0 ID=Thaps4042;Parent=Thaps4042;rank=2 chr3 . exon 2416764 2417514 . + . ID=Thaps4042.2;Parent=Thaps4042;constitutive=1;ensembl_end_phase=1;rank=2 chr3 ensembl protein_coding_gene 2417829 2420276 . + . ID=Thaps4043;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP5];external_name=Thaps4043;logic_name=jgi_thaps3 chr3 ensembl transcript 2417829 2420276 . + . ID=Thaps4043;Parent=Thaps4043;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2417829 2419103 . + 0 ID=Thaps4043;Parent=Thaps4043;rank=1 chr3 . exon 2417829 2419103 . + . ID=Thaps4043.1;Parent=Thaps4043;constitutive=1;rank=1 chr3 . CDS 2419180 2419957 . + 0 ID=Thaps4043;Parent=Thaps4043;rank=2 chr3 . exon 2419180 2419957 . + . ID=Thaps4043.2;Parent=Thaps4043;constitutive=1;ensembl_end_phase=1;rank=2 chr3 . CDS 2420035 2420098 . + 0 ID=Thaps4043;Parent=Thaps4043;rank=3 chr3 . exon 2420035 2420098 . + . ID=Thaps4043.3;Parent=Thaps4043;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . CDS 2420180 2420276 . + 0 ID=Thaps4043;Parent=Thaps4043;rank=4 chr3 . exon 2420180 2420276 . + . ID=Thaps4043.4;Parent=Thaps4043;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . repeat_region 2424731 2424758 . ? . description=trf chr3 ensembl protein_coding_gene 2420497 2421972 . - . ID=Thaps22057;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP6];external_name=Thaps22057;logic_name=jgi_thaps3 chr3 ensembl transcript 2420497 2421972 . - . ID=Thaps22057;Parent=Thaps22057;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2420497 2421146 . - 0 ID=Thaps22057;Parent=Thaps22057;rank=2 chr3 . exon 2420497 2421146 . - . ID=Thaps22057.2;Parent=Thaps22057;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2421291 2421972 . - 0 ID=Thaps22057;Parent=Thaps22057;rank=1 chr3 . exon 2421291 2421972 . - . ID=Thaps22057.1;Parent=Thaps22057;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2423004 2425019 . + . ID=Thaps4045;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP7];external_name=Thaps4045;logic_name=jgi_thaps3 chr3 ensembl transcript 2423004 2425019 . + . ID=Thaps4045;Parent=Thaps4045;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2423004 2423571 . + 0 ID=Thaps4045;Parent=Thaps4045;rank=1 chr3 . exon 2423004 2423571 . + . ID=Thaps4045.1;Parent=Thaps4045;constitutive=1;ensembl_end_phase=1;rank=1 chr3 . CDS 2423647 2425019 . + 0 ID=Thaps4045;Parent=Thaps4045;rank=2 chr3 . exon 2423647 2425019 . + . ID=Thaps4045.2;Parent=Thaps4045;constitutive=1;ensembl_end_phase=2;rank=2 chr3 ensembl protein_coding_gene 2425494 2426729 . - . ID=Thaps4046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP8];external_name=Thaps4046;logic_name=jgi_thaps3 chr3 ensembl transcript 2425494 2426729 . - . ID=Thaps4046;Parent=Thaps4046;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2425494 2426729 . - 0 ID=Thaps4046;Parent=Thaps4046;rank=1 chr3 . exon 2425494 2426729 . - . ID=Thaps4046.1;Parent=Thaps4046;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2427511 2431621 . - . ID=Thaps4047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWP9];external_name=Thaps4047;logic_name=jgi_thaps3 chr3 ensembl transcript 2427511 2431621 . - . ID=Thaps4047;Parent=Thaps4047;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2427511 2427526 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=12 chr3 . exon 2427511 2427526 . - . ID=Thaps4047.12;Parent=Thaps4047;constitutive=1;ensembl_end_phase=1;rank=12 chr3 . CDS 2427620 2428206 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=11 chr3 . exon 2427620 2428206 . - . ID=Thaps4047.11;Parent=Thaps4047;constitutive=1;ensembl_end_phase=2;rank=11 chr3 . CDS 2428301 2428439 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=10 chr3 . exon 2428301 2428439 . - . ID=Thaps4047.10;Parent=Thaps4047;constitutive=1;ensembl_end_phase=1;rank=10 chr3 . CDS 2428547 2429118 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=9 chr3 . exon 2428547 2429118 . - . ID=Thaps4047.9;Parent=Thaps4047;constitutive=1;ensembl_end_phase=2;rank=9 chr3 . CDS 2429219 2429260 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=8 chr3 . exon 2429219 2429260 . - . ID=Thaps4047.8;Parent=Thaps4047;constitutive=1;rank=8 chr3 . CDS 2429365 2429376 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=7 chr3 . exon 2429365 2429376 . - . ID=Thaps4047.7;Parent=Thaps4047;constitutive=1;rank=7 chr3 . CDS 2429468 2429509 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=6 chr3 . exon 2429468 2429509 . - . ID=Thaps4047.6;Parent=Thaps4047;constitutive=1;rank=6 chr3 . CDS 2429618 2430388 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=5 chr3 . exon 2429618 2430388 . - . ID=Thaps4047.5;Parent=Thaps4047;constitutive=1;rank=5 chr3 . CDS 2430495 2430630 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=4 chr3 . CDS 2430721 2431159 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=3 chr3 . CDS 2431204 2431275 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=2 chr3 . CDS 2431366 2431621 . - 0 ID=Thaps4047;Parent=Thaps4047;rank=1 chr3 . repeat_region 2437968 2438000 . ? . description=dust chr3 . exon 2430495 2430630 . - . ID=Thaps4047.4;Parent=Thaps4047;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . exon 2430721 2431159 . - . ID=Thaps4047.3;Parent=Thaps4047;constitutive=1;ensembl_end_phase=1;rank=3 chr3 . exon 2431204 2431275 . - . ID=Thaps4047.2;Parent=Thaps4047;constitutive=1;rank=2 chr3 . exon 2431366 2431621 . - . ID=Thaps4047.1;Parent=Thaps4047;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2432919 2433881 . - . ID=Thaps4048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ0];external_name=Thaps4048;logic_name=jgi_thaps3 chr3 ensembl transcript 2432919 2433881 . - . ID=Thaps4048;Parent=Thaps4048;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2432919 2433724 . - 0 ID=Thaps4048;Parent=Thaps4048;rank=2 chr3 . exon 2432919 2433724 . - . ID=Thaps4048.2;Parent=Thaps4048;constitutive=1;ensembl_end_phase=2;rank=2 chr3 . CDS 2433770 2433881 . - 0 ID=Thaps4048;Parent=Thaps4048;rank=1 chr3 . exon 2433770 2433881 . - . ID=Thaps4048.1;Parent=Thaps4048;constitutive=1;ensembl_end_phase=1;rank=1 chr3 ensembl protein_coding_gene 2434330 2435370 . + . ID=Thaps4049;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ1];external_name=Thaps4049;logic_name=jgi_thaps3 chr3 ensembl transcript 2434330 2435370 . + . ID=Thaps4049;Parent=Thaps4049;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2434330 2435370 . + 0 ID=Thaps4049;Parent=Thaps4049;rank=1 chr3 . exon 2434330 2435370 . + . ID=Thaps4049.1;Parent=Thaps4049;constitutive=1;rank=1 chr3 ensembl protein_coding_gene 2435481 2440028 . - . ID=Thaps4050;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BWQ2];external_name=Thaps4050;logic_name=jgi_thaps3 chr3 ensembl transcript 2435481 2440028 . - . ID=Thaps4050;Parent=Thaps4050;biotype=protein_coding;logic_name=jgi_thaps3 chr3 . CDS 2435481 2435568 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=14 chr3 . exon 2435481 2435568 . - . ID=Thaps4050.14;Parent=Thaps4050;constitutive=1;ensembl_end_phase=1;rank=14 chr3 . CDS 2435775 2436361 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=13 chr3 . exon 2435775 2436361 . - . ID=Thaps4050.13;Parent=Thaps4050;constitutive=1;ensembl_end_phase=2;rank=13 chr3 . CDS 2436457 2436595 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=12 chr3 . exon 2436457 2436595 . - . ID=Thaps4050.12;Parent=Thaps4050;constitutive=1;ensembl_end_phase=1;rank=12 chr3 . CDS 2436702 2437273 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=11 chr3 . exon 2436702 2437273 . - . ID=Thaps4050.11;Parent=Thaps4050;constitutive=1;ensembl_end_phase=2;rank=11 chr3 . CDS 2437374 2437415 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=10 chr3 . exon 2437374 2437415 . - . ID=Thaps4050.10;Parent=Thaps4050;constitutive=1;rank=10 chr3 . CDS 2437520 2437531 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=9 chr3 . exon 2437520 2437531 . - . ID=Thaps4050.9;Parent=Thaps4050;constitutive=1;rank=9 chr3 . CDS 2437623 2437664 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=8 chr3 . exon 2437623 2437664 . - . ID=Thaps4050.8;Parent=Thaps4050;constitutive=1;rank=8 chr3 . CDS 2437773 2437931 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=7 chr3 . exon 2437773 2437931 . - . ID=Thaps4050.7;Parent=Thaps4050;constitutive=1;rank=7 chr3 . CDS 2438181 2438411 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=6 chr3 . exon 2438181 2438411 . - . ID=Thaps4050.6;Parent=Thaps4050;constitutive=1;rank=6 chr3 . CDS 2438487 2439239 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=5 chr3 . exon 2438487 2439239 . - . ID=Thaps4050.5;Parent=Thaps4050;constitutive=1;rank=5 chr3 . CDS 2439323 2439389 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=4 chr3 . exon 2439323 2439389 . - . ID=Thaps4050.4;Parent=Thaps4050;constitutive=1;ensembl_end_phase=1;rank=4 chr3 . CDS 2439469 2439555 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=3 chr3 . exon 2439469 2439555 . - . ID=Thaps4050.3;Parent=Thaps4050;constitutive=1;rank=3 chr3 . CDS 2439674 2439739 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=2 chr3 . exon 2439674 2439739 . - . ID=Thaps4050.2;Parent=Thaps4050;constitutive=1;rank=2 chr3 . CDS 2439835 2440028 . - 0 ID=Thaps4050;Parent=Thaps4050;rank=1 chr3 . exon 2439835 2440028 . - . ID=Thaps4050.1;Parent=Thaps4050;constitutive=1;ensembl_end_phase=2;rank=1 ##gff-version 3 ##sequence-region 2 1 2707195 chr2 . repeat_region 1 419 . ? . description=trf chr2 . repeat_region 1 419 . ? . description=dust chr2 . repeat_region 1446 1492 . ? . description=dust chr2 . repeat_region 1867 2092 . ? . description=trf chr2 . repeat_region 1867 2097 . ? . description=dust chr2 . repeat_region 2115 2240 . ? . description=trf chr2 . repeat_region 2299 2399 . ? . description=trf chr2 . repeat_region 3713 3935 . ? . description=dust chr2 . repeat_region 3717 3938 . ? . description=trf chr2 . repeat_region 4019 4204 . ? . description=trf chr2 . repeat_region 4020 4169 . ? . description=trf chr2 . repeat_region 4061 4204 . ? . description=trf chr2 . repeat_region 4226 4288 . ? . description=dust chr2 . repeat_region 4226 4304 . ? . description=trf chr2 . repeat_region 4228 4304 . + . description=Harbinger2N_TP chr2 . repeat_region 5475 6435 . + . description=Harbinger2_TP chr2 . repeat_region 6139 6210 . ? . description=trf chr2 . repeat_region 6388 6396 . ? . description=dust chr2 . repeat_region 7139 7204 . ? . description=trf chr2 . repeat_region 7142 7204 . ? . description=dust chr2 ensembl protein_coding_gene 6959 10817 . + . ID=Thaps21092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT82];external_name=Thaps21092;logic_name=jgi_thaps3 chr2 ensembl transcript 6959 10817 . + . ID=Thaps21092;Parent=Thaps21092;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 6959 8090 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=1 chr2 . exon 6959 8090 . + . ID=Thaps21092.1;Parent=Thaps21092;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 8168 8295 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=2 chr2 . exon 8168 8295 . + . ID=Thaps21092.2;Parent=Thaps21092;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 8383 8417 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=3 chr2 . exon 8383 8417 . + . ID=Thaps21092.3;Parent=Thaps21092;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 8438 8827 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=4 chr2 . exon 8438 8827 . + . ID=Thaps21092.4;Parent=Thaps21092;constitutive=1;rank=4 chr2 . CDS 8898 8974 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=5 chr2 . exon 8898 8974 . + . ID=Thaps21092.5;Parent=Thaps21092;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 9071 9084 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=6 chr2 . exon 9071 9084 . + . ID=Thaps21092.6;Parent=Thaps21092;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 9180 9413 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=7 chr2 . exon 9180 9413 . + . ID=Thaps21092.7;Parent=Thaps21092;constitutive=1;rank=7 chr2 . CDS 9509 9543 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=8 chr2 . exon 9509 9543 . + . ID=Thaps21092.8;Parent=Thaps21092;constitutive=1;ensembl_end_phase=2;rank=8 chr2 . CDS 9623 9649 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=9 chr2 . exon 9623 9649 . + . ID=Thaps21092.9;Parent=Thaps21092;constitutive=1;rank=9 chr2 . CDS 9731 9757 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=10 chr2 . exon 9731 9757 . + . ID=Thaps21092.10;Parent=Thaps21092;constitutive=1;rank=10 chr2 . CDS 9834 10026 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=11 chr2 . exon 9834 10026 . + . ID=Thaps21092.11;Parent=Thaps21092;constitutive=1;ensembl_end_phase=1;rank=11 chr2 . CDS 10114 10261 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=12 chr2 . CDS 10352 10362 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=13 chr2 . CDS 10449 10817 . + 0 ID=Thaps21092;Parent=Thaps21092;rank=14 chr2 . repeat_region 10904 13795 . + . description=Harbinger3_TP chr2 . repeat_region 15816 16853 . + . description=Harbinger3_TP chr2 ensembl protein_coding_gene 13891 15702 . - . ID=Thaps2047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT83];external_name=Thaps2047;logic_name=jgi_thaps3 chr2 ensembl transcript 13891 15702 . - . ID=Thaps2047;Parent=Thaps2047;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 13891 15702 . - 0 ID=Thaps2047;Parent=Thaps2047;rank=1 chr2 . exon 13891 15702 . - . ID=Thaps2047.1;Parent=Thaps2047;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 19413 22000 . + . ID=Thaps2049;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT85];external_name=Thaps2049;logic_name=jgi_thaps3 chr2 ensembl transcript 19413 22000 . + . ID=Thaps2049;Parent=Thaps2049;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 19413 21138 . + 0 ID=Thaps2049;Parent=Thaps2049;rank=1 chr2 . exon 19413 21138 . + . ID=Thaps2049.1;Parent=Thaps2049;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 21234 22000 . + 0 ID=Thaps2049;Parent=Thaps2049;rank=2 chr2 . exon 10114 10261 . + . ID=Thaps21092.12;Parent=Thaps21092;constitutive=1;ensembl_end_phase=1;rank=12 chr2 . exon 10352 10362 . + . ID=Thaps21092.13;Parent=Thaps21092;constitutive=1;ensembl_end_phase=2;rank=13 chr2 . exon 10449 10817 . + . ID=Thaps21092.14;Parent=Thaps21092;constitutive=1;rank=14 chr2 ensembl protein_coding_gene 17030 18193 . - . ID=Thaps268147;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BT84];external_name=Thaps268147;logic_name=jgi_thaps3 chr2 ensembl transcript 17030 18193 . - . ID=Thaps268147;Parent=Thaps268147;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 17030 17314 . - 0 ID=Thaps268147;Parent=Thaps268147;rank=3 chr2 . exon 17030 17314 . - . ID=Thaps268147.3;Parent=Thaps268147;constitutive=1;rank=3 chr2 . CDS 17342 17970 . - 0 ID=Thaps268147;Parent=Thaps268147;rank=2 chr2 . exon 17342 17970 . - . ID=Thaps268147.2;Parent=Thaps268147;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 18034 18193 . - 0 ID=Thaps268147;Parent=Thaps268147;rank=1 chr2 . exon 18034 18193 . - . ID=Thaps268147.1;Parent=Thaps268147;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 27116 27124 . ? . description=dust chr2 ensembl pseudogenic_tRNA 26717 26787 . - . ID=EPrTPOG00000000085;biotype=tRNA_pseudogene;description=tRNA-Pseudo for anticodon GCA [Source:TRNASCAN_SE%3BAcc:tRNA-Pseudo];external_name=tRNA-Pseudo;logic_name=ncrna_eg chr2 ensembl transcript 26717 26787 . - . ID=EPrTPOT00000000085;Parent=EPrTPOG00000000085;biotype=tRNA_pseudogene;logic_name=ncrna_eg chr2 . exon 26717 26787 . - . ID=EPrTPOE00000000085;Parent=EPrTPOT00000000085;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 28539 29552 . + . ID=Thaps15976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT87];external_name=Thaps15976;logic_name=jgi_thaps3 chr2 ensembl transcript 28539 29552 . + . ID=Thaps15976;Parent=Thaps15976;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 28539 29192 . + 0 ID=Thaps15976;Parent=Thaps15976;rank=1 chr2 . exon 28539 29192 . + . ID=Thaps15976.1;Parent=Thaps15976;constitutive=1;rank=1 chr2 . CDS 29274 29552 . + 0 ID=Thaps15976;Parent=Thaps15976;rank=2 chr2 . exon 29274 29552 . + . ID=Thaps15976.2;Parent=Thaps15976;constitutive=1;rank=2 chr2 . exon 21234 22000 . + . ID=Thaps2049.2;Parent=Thaps2049;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 23154 25815 . + . ID=Thaps2050;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT86];external_name=Thaps2050;logic_name=jgi_thaps3 chr2 ensembl transcript 23154 25815 . + . ID=Thaps2050;Parent=Thaps2050;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 23154 24698 . + 0 ID=Thaps2050;Parent=Thaps2050;rank=1 chr2 . exon 23154 24698 . + . ID=Thaps2050.1;Parent=Thaps2050;constitutive=1;rank=1 chr2 . CDS 24796 24955 . + 0 ID=Thaps2050;Parent=Thaps2050;rank=2 chr2 . exon 24796 24955 . + . ID=Thaps2050.2;Parent=Thaps2050;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 25040 25228 . + 0 ID=Thaps2050;Parent=Thaps2050;rank=3 chr2 . exon 25040 25228 . + . ID=Thaps2050.3;Parent=Thaps2050;constitutive=1;rank=3 chr2 . CDS 25352 25815 . + 0 ID=Thaps2050;Parent=Thaps2050;rank=4 chr2 . exon 25352 25815 . + . ID=Thaps2050.4;Parent=Thaps2050;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . repeat_region 37607 37656 . ? . description=trf chr2 ensembl protein_coding_gene 33279 34056 . + . ID=Thaps2052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT88];external_name=Thaps2052;logic_name=jgi_thaps3 chr2 ensembl transcript 33279 34056 . + . ID=Thaps2052;Parent=Thaps2052;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 33279 33716 . + 0 ID=Thaps2052;Parent=Thaps2052;rank=1 chr2 . exon 33279 33716 . + . ID=Thaps2052.1;Parent=Thaps2052;constitutive=1;rank=1 chr2 . CDS 33811 34056 . + 0 ID=Thaps2052;Parent=Thaps2052;rank=2 chr2 . exon 33811 34056 . + . ID=Thaps2052.2;Parent=Thaps2052;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 36826 37752 . - . ID=Thaps2053;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT89];external_name=Thaps2053;logic_name=jgi_thaps3 chr2 ensembl transcript 36826 37752 . - . ID=Thaps2053;Parent=Thaps2053;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 36826 37752 . - 0 ID=Thaps2053;Parent=Thaps2053;rank=1 chr2 . exon 36826 37752 . - . ID=Thaps2053.1;Parent=Thaps2053;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 39945 40526 . - . ID=Thaps2055;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT91];external_name=Thaps2055;logic_name=jgi_thaps3 chr2 ensembl transcript 39945 40526 . - . ID=Thaps2055;Parent=Thaps2055;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 39945 40526 . - 0 ID=Thaps2055;Parent=Thaps2055;rank=1 chr2 . exon 39945 40526 . - . ID=Thaps2055.1;Parent=Thaps2055;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 38379 39529 . + . ID=Thaps21094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT90];external_name=Thaps21094;logic_name=jgi_thaps3 chr2 ensembl transcript 38379 39529 . + . ID=Thaps21094;Parent=Thaps21094;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 38379 38486 . + 0 ID=Thaps21094;Parent=Thaps21094;rank=1 chr2 . exon 38379 38486 . + . ID=Thaps21094.1;Parent=Thaps21094;constitutive=1;rank=1 chr2 . CDS 38800 39225 . + 0 ID=Thaps21094;Parent=Thaps21094;rank=2 chr2 . exon 38800 39225 . + . ID=Thaps21094.2;Parent=Thaps21094;constitutive=1;rank=2 chr2 . CDS 39317 39529 . + 0 ID=Thaps21094;Parent=Thaps21094;rank=3 chr2 . exon 39317 39529 . + . ID=Thaps21094.3;Parent=Thaps21094;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 49583 51961 . + . ID=Thaps12943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT93];external_name=Thaps12943;logic_name=jgi_thaps3 chr2 ensembl transcript 49583 51961 . + . ID=Thaps12943;Parent=Thaps12943;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 49583 49756 . + 0 ID=Thaps12943;Parent=Thaps12943;rank=1 chr2 . exon 49583 49756 . + . ID=Thaps12943.1;Parent=Thaps12943;constitutive=1;rank=1 chr2 . CDS 49904 49944 . + 0 ID=Thaps12943;Parent=Thaps12943;rank=2 chr2 . exon 49904 49944 . + . ID=Thaps12943.2;Parent=Thaps12943;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 50080 50660 . + 0 ID=Thaps12943;Parent=Thaps12943;rank=3 chr2 . CDS 50775 51575 . + 0 ID=Thaps12943;Parent=Thaps12943;rank=4 chr2 . CDS 51672 51961 . + 0 ID=Thaps12943;Parent=Thaps12943;rank=5 chr2 ensembl protein_coding_gene 46622 47987 . + . ID=Thaps261179;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT92];external_name=Thaps261179;logic_name=jgi_thaps3 chr2 ensembl transcript 46622 47987 . + . ID=Thaps261179;Parent=Thaps261179;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 46622 46834 . + 0 ID=Thaps261179;Parent=Thaps261179;rank=1 chr2 . exon 46622 46834 . + . ID=Thaps261179.1;Parent=Thaps261179;constitutive=1;rank=1 chr2 . CDS 46955 47987 . + 0 ID=Thaps261179;Parent=Thaps261179;rank=2 chr2 . exon 46955 47987 . + . ID=Thaps261179.2;Parent=Thaps261179;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . repeat_region 53356 53363 . ? . description=dust chr2 . repeat_region 54639 55168 . ? . description=trf chr2 . repeat_region 57603 57652 . ? . description=trf chr2 . repeat_region 59858 59879 . ? . description=dust chr2 . exon 50080 50660 . + . ID=Thaps12943.3;Parent=Thaps12943;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . exon 50775 51575 . + . ID=Thaps12943.4;Parent=Thaps12943;constitutive=1;rank=4 chr2 . exon 51672 51961 . + . ID=Thaps12943.5;Parent=Thaps12943;constitutive=1;ensembl_end_phase=2;rank=5 chr2 ensembl protein_coding_gene 53632 55725 . + . ID=Thaps2058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT94];external_name=Thaps2058;logic_name=jgi_thaps3 chr2 ensembl transcript 53632 55725 . + . ID=Thaps2058;Parent=Thaps2058;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 53632 55725 . + 0 ID=Thaps2058;Parent=Thaps2058;rank=1 chr2 . exon 53632 55725 . + . ID=Thaps2058.1;Parent=Thaps2058;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 63723 64262 . + . ID=Thaps2060;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT96];external_name=Thaps2060;logic_name=jgi_thaps3 chr2 ensembl transcript 63723 64262 . + . ID=Thaps2060;Parent=Thaps2060;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 63723 64262 . + 0 ID=Thaps2060;Parent=Thaps2060;rank=1 chr2 . exon 63723 64262 . + . ID=Thaps2060.1;Parent=Thaps2060;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 66893 70448 . + . ID=Thaps21098;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT98];external_name=Thaps21098;logic_name=jgi_thaps3 chr2 ensembl transcript 66893 70448 . + . ID=Thaps21098;Parent=Thaps21098;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 66893 67351 . + 0 ID=Thaps21098;Parent=Thaps21098;rank=1 chr2 . exon 66893 67351 . + . ID=Thaps21098.1;Parent=Thaps21098;constitutive=1;rank=1 chr2 . CDS 67522 67924 . + 0 ID=Thaps21098;Parent=Thaps21098;rank=2 chr2 . exon 67522 67924 . + . ID=Thaps21098.2;Parent=Thaps21098;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 68224 68317 . + 0 ID=Thaps21098;Parent=Thaps21098;rank=3 chr2 . exon 68224 68317 . + . ID=Thaps21098.3;Parent=Thaps21098;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 68400 68635 . + 0 ID=Thaps21098;Parent=Thaps21098;rank=4 chr2 . exon 68400 68635 . + . ID=Thaps21098.4;Parent=Thaps21098;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 69040 70448 . + 0 ID=Thaps21098;Parent=Thaps21098;rank=5 chr2 . exon 69040 70448 . + . ID=Thaps21098.5;Parent=Thaps21098;constitutive=1;ensembl_end_phase=2;rank=5 chr2 ensembl protein_coding_gene 60795 61882 . + . ID=Thaps261180;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT95];external_name=Thaps261180;logic_name=jgi_thaps3 chr2 ensembl transcript 60795 61882 . + . ID=Thaps261180;Parent=Thaps261180;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 60795 61055 . + 0 ID=Thaps261180;Parent=Thaps261180;rank=1 chr2 . exon 60795 61055 . + . ID=Thaps261180.1;Parent=Thaps261180;constitutive=1;rank=1 chr2 . CDS 61254 61882 . + 0 ID=Thaps261180;Parent=Thaps261180;rank=2 chr2 . exon 61254 61882 . + . ID=Thaps261180.2;Parent=Thaps261180;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 65812 66134 . + . ID=Thaps261181;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT97];external_name=Thaps261181;logic_name=jgi_thaps3 chr2 ensembl transcript 65812 66134 . + . ID=Thaps261181;Parent=Thaps261181;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 65812 66134 . + 0 ID=Thaps261181;Parent=Thaps261181;rank=1 chr2 . exon 65812 66134 . + . ID=Thaps261181.1;Parent=Thaps261181;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 70669 70715 . ? . description=trf chr2 . repeat_region 74696 74715 . ? . description=trf chr2 . repeat_region 75676 75706 . ? . description=trf chr2 ensembl rRNA_gene 74196 74305 . + . ID=EPrTPOG00000000099;biotype=rRNA;description=8s_rRNA [Source:RNAMMER%3BAcc:8s_rRNA];external_name=8s_rRNA;logic_name=ncrna_eg chr2 ensembl rRNA 74196 74305 . + . ID=EPrTPOT00000000099;Parent=EPrTPOG00000000099;biotype=rRNA;logic_name=ncrna_eg chr2 . exon 74196 74305 . + . ID=EPrTPOE00000000099;Parent=EPrTPOT00000000099;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 70626 72344 . - . ID=Thaps2063;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT99];external_name=Thaps2063;logic_name=jgi_thaps3 chr2 ensembl transcript 70626 72344 . - . ID=Thaps2063;Parent=Thaps2063;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 70626 72081 . - 0 ID=Thaps2063;Parent=Thaps2063;rank=2 chr2 . exon 70626 72081 . - . ID=Thaps2063.2;Parent=Thaps2063;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 72184 72344 . - 0 ID=Thaps2063;Parent=Thaps2063;rank=1 chr2 . exon 72184 72344 . - . ID=Thaps2063.1;Parent=Thaps2063;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 73005 74136 . - . ID=Thaps2064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTA0];external_name=Thaps2064;logic_name=jgi_thaps3 chr2 ensembl transcript 73005 74136 . - . ID=Thaps2064;Parent=Thaps2064;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 73005 73345 . - 0 ID=Thaps2064;Parent=Thaps2064;rank=2 chr2 . exon 73005 73345 . - . ID=Thaps2064.2;Parent=Thaps2064;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 73428 74136 . - 0 ID=Thaps2064;Parent=Thaps2064;rank=1 chr2 . exon 73428 74136 . - . ID=Thaps2064.1;Parent=Thaps2064;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 74824 76113 . + . ID=Thaps2065;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTA1];external_name=Thaps2065;logic_name=jgi_thaps3 chr2 ensembl transcript 74824 76113 . + . ID=Thaps2065;Parent=Thaps2065;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 74824 76113 . + 0 ID=Thaps2065;Parent=Thaps2065;rank=1 chr2 . exon 74824 76113 . + . ID=Thaps2065.1;Parent=Thaps2065;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 76251 82591 . - . ID=Thaps2066;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTA2];external_name=Thaps2066;logic_name=jgi_thaps3 chr2 ensembl transcript 76251 82591 . - . ID=Thaps2066;Parent=Thaps2066;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 76251 76261 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=19 chr2 . exon 76251 76261 . - . ID=Thaps2066.19;Parent=Thaps2066;constitutive=1;ensembl_end_phase=2;rank=19 chr2 . CDS 76326 76922 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=18 chr2 . exon 76326 76922 . - . ID=Thaps2066.18;Parent=Thaps2066;constitutive=1;rank=18 chr2 . CDS 77243 77309 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=17 chr2 . exon 77243 77309 . - . ID=Thaps2066.17;Parent=Thaps2066;constitutive=1;ensembl_end_phase=1;rank=17 chr2 . CDS 77428 77499 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=16 chr2 . exon 77428 77499 . - . ID=Thaps2066.16;Parent=Thaps2066;constitutive=1;rank=16 chr2 . CDS 77597 77654 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=15 chr2 . exon 77597 77654 . - . ID=Thaps2066.15;Parent=Thaps2066;constitutive=1;ensembl_end_phase=1;rank=15 chr2 . CDS 77769 77821 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=14 chr2 . exon 77769 77821 . - . ID=Thaps2066.14;Parent=Thaps2066;constitutive=1;ensembl_end_phase=2;rank=14 chr2 . CDS 77975 78041 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=13 chr2 . exon 77975 78041 . - . ID=Thaps2066.13;Parent=Thaps2066;constitutive=1;ensembl_end_phase=1;rank=13 chr2 . CDS 78129 78242 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=12 chr2 . exon 78129 78242 . - . ID=Thaps2066.12;Parent=Thaps2066;constitutive=1;rank=12 chr2 . CDS 78344 78885 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=11 chr2 . exon 78344 78885 . - . ID=Thaps2066.11;Parent=Thaps2066;constitutive=1;ensembl_end_phase=2;rank=11 chr2 . CDS 78992 79042 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=10 chr2 . exon 78992 79042 . - . ID=Thaps2066.10;Parent=Thaps2066;constitutive=1;rank=10 chr2 . CDS 79131 79263 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=9 chr2 . exon 79131 79263 . - . ID=Thaps2066.9;Parent=Thaps2066;constitutive=1;ensembl_end_phase=1;rank=9 chr2 . CDS 79354 79868 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=8 chr2 . exon 79354 79868 . - . ID=Thaps2066.8;Parent=Thaps2066;constitutive=1;ensembl_end_phase=2;rank=8 chr2 . CDS 79959 80013 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=7 chr2 . CDS 80096 80158 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=6 chr2 . CDS 80243 80308 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=5 chr2 . CDS 80403 80893 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=4 chr2 . CDS 80990 81143 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=3 chr2 . CDS 81226 82214 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=2 chr2 . CDS 82310 82591 . - 0 ID=Thaps2066;Parent=Thaps2066;rank=1 chr2 . exon 79959 80013 . - . ID=Thaps2066.7;Parent=Thaps2066;constitutive=1;ensembl_end_phase=1;rank=7 chr2 . exon 80096 80158 . - . ID=Thaps2066.6;Parent=Thaps2066;constitutive=1;rank=6 chr2 . exon 80243 80308 . - . ID=Thaps2066.5;Parent=Thaps2066;constitutive=1;rank=5 chr2 . exon 80403 80893 . - . ID=Thaps2066.4;Parent=Thaps2066;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . exon 80990 81143 . - . ID=Thaps2066.3;Parent=Thaps2066;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . exon 81226 82214 . - . ID=Thaps2066.2;Parent=Thaps2066;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . exon 82310 82591 . - . ID=Thaps2066.1;Parent=Thaps2066;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 85382 87282 . - . ID=Thaps2068;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTA4];external_name=Thaps2068;logic_name=jgi_thaps3 chr2 ensembl transcript 85382 87282 . - . ID=Thaps2068;Parent=Thaps2068;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 85382 85779 . - 0 ID=Thaps2068;Parent=Thaps2068;rank=4 chr2 . exon 85382 85779 . - . ID=Thaps2068.4;Parent=Thaps2068;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 85874 86654 . - 0 ID=Thaps2068;Parent=Thaps2068;rank=3 chr2 . exon 85874 86654 . - . ID=Thaps2068.3;Parent=Thaps2068;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 86741 87114 . - 0 ID=Thaps2068;Parent=Thaps2068;rank=2 chr2 . exon 86741 87114 . - . ID=Thaps2068.2;Parent=Thaps2068;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 87192 87282 . - 0 ID=Thaps2068;Parent=Thaps2068;rank=1 chr2 . exon 87192 87282 . - . ID=Thaps2068.1;Parent=Thaps2068;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 89315 90595 . - . ID=Thaps2069;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTA5];external_name=Thaps2069;logic_name=jgi_thaps3 chr2 ensembl transcript 89315 90595 . - . ID=Thaps2069;Parent=Thaps2069;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 89315 90595 . - 0 ID=Thaps2069;Parent=Thaps2069;rank=1 chr2 . exon 89315 90595 . - . ID=Thaps2069.1;Parent=Thaps2069;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 83935 85253 . + . ID=Thaps32067;biotype=protein_coding;description=Alpha-keto acid dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BTA3];external_name=Thaps32067;logic_name=jgi_thaps3 chr2 ensembl transcript 83935 85253 . + . ID=Thaps32067;Parent=Thaps32067;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 83935 84114 . + 0 ID=Thaps32067;Parent=Thaps32067;rank=1 chr2 . exon 83935 84114 . + . ID=Thaps32067.1;Parent=Thaps32067;constitutive=1;rank=1 chr2 . CDS 84263 84436 . + 0 ID=Thaps32067;Parent=Thaps32067;rank=2 chr2 . exon 84263 84436 . + . ID=Thaps32067.2;Parent=Thaps32067;constitutive=1;rank=2 chr2 . CDS 84551 84709 . + 0 ID=Thaps32067;Parent=Thaps32067;rank=3 chr2 . exon 84551 84709 . + . ID=Thaps32067.3;Parent=Thaps32067;constitutive=1;rank=3 chr2 . CDS 84795 85253 . + 0 ID=Thaps32067;Parent=Thaps32067;rank=4 chr2 . exon 84795 85253 . + . ID=Thaps32067.4;Parent=Thaps32067;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 92948 98249 . - . ID=Thaps2070;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTA7];external_name=Thaps2070;logic_name=jgi_thaps3 chr2 ensembl transcript 92948 98249 . - . ID=Thaps2070;Parent=Thaps2070;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 92948 93088 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=22 chr2 . exon 92948 93088 . - . ID=Thaps2070.22;Parent=Thaps2070;constitutive=1;rank=22 chr2 . CDS 93174 93339 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=21 chr2 . exon 93174 93339 . - . ID=Thaps2070.21;Parent=Thaps2070;constitutive=1;ensembl_end_phase=1;rank=21 chr2 . CDS 93478 93768 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=20 chr2 . exon 93478 93768 . - . ID=Thaps2070.20;Parent=Thaps2070;constitutive=1;rank=20 chr2 . CDS 93850 93926 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=19 chr2 . exon 93850 93926 . - . ID=Thaps2070.19;Parent=Thaps2070;constitutive=1;ensembl_end_phase=2;rank=19 chr2 . CDS 94028 94075 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=18 chr2 . exon 94028 94075 . - . ID=Thaps2070.18;Parent=Thaps2070;constitutive=1;rank=18 chr2 . CDS 94445 94707 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=17 chr2 . exon 94445 94707 . - . ID=Thaps2070.17;Parent=Thaps2070;constitutive=1;ensembl_end_phase=2;rank=17 chr2 . CDS 94766 94886 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=16 chr2 . exon 94766 94886 . - . ID=Thaps2070.16;Parent=Thaps2070;constitutive=1;ensembl_end_phase=1;rank=16 chr2 . CDS 95213 95260 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=15 chr2 . exon 95213 95260 . - . ID=Thaps2070.15;Parent=Thaps2070;constitutive=1;rank=15 chr2 . CDS 95350 95409 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=14 chr2 . exon 95350 95409 . - . ID=Thaps2070.14;Parent=Thaps2070;constitutive=1;rank=14 chr2 . CDS 95490 95513 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=13 chr2 . exon 95490 95513 . - . ID=Thaps2070.13;Parent=Thaps2070;constitutive=1;rank=13 chr2 . CDS 95594 95638 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=12 chr2 . exon 95594 95638 . - . ID=Thaps2070.12;Parent=Thaps2070;constitutive=1;rank=12 chr2 . CDS 95755 95831 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=11 chr2 . exon 95755 95831 . - . ID=Thaps2070.11;Parent=Thaps2070;constitutive=1;ensembl_end_phase=2;rank=11 chr2 . CDS 95975 96029 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=10 chr2 . exon 95975 96029 . - . ID=Thaps2070.10;Parent=Thaps2070;constitutive=1;ensembl_end_phase=1;rank=10 chr2 . CDS 96104 96187 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=9 chr2 . exon 96104 96187 . - . ID=Thaps2070.9;Parent=Thaps2070;constitutive=1;rank=9 chr2 . CDS 96284 96341 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=8 chr2 . exon 96284 96341 . - . ID=Thaps2070.8;Parent=Thaps2070;constitutive=1;ensembl_end_phase=1;rank=8 chr2 . CDS 96456 96508 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=7 chr2 . exon 96456 96508 . - . ID=Thaps2070.7;Parent=Thaps2070;constitutive=1;ensembl_end_phase=2;rank=7 chr2 . CDS 96662 96728 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=6 chr2 . exon 96662 96728 . - . ID=Thaps2070.6;Parent=Thaps2070;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 96816 96892 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=5 chr2 . exon 96816 96892 . - . ID=Thaps2070.5;Parent=Thaps2070;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 97015 97074 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=4 chr2 . exon 97015 97074 . - . ID=Thaps2070.4;Parent=Thaps2070;constitutive=1;rank=4 chr2 . CDS 97202 97268 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=3 chr2 . exon 97202 97268 . - . ID=Thaps2070.3;Parent=Thaps2070;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 97352 97411 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=2 chr2 . exon 97352 97411 . - . ID=Thaps2070.2;Parent=Thaps2070;constitutive=1;rank=2 chr2 . CDS 97603 98249 . - 0 ID=Thaps2070;Parent=Thaps2070;rank=1 chr2 . exon 97603 98249 . - . ID=Thaps2070.1;Parent=Thaps2070;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 99725 100162 . - . ID=Thaps261184;biotype=protein_coding;description=Low molecular weight heat shock protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTA8];external_name=Thaps261184;logic_name=jgi_thaps3 chr2 ensembl transcript 99725 100162 . - . ID=Thaps261184;Parent=Thaps261184;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 99725 99994 . - 0 ID=Thaps261184;Parent=Thaps261184;rank=2 chr2 . exon 99725 99994 . - . ID=Thaps261184.2;Parent=Thaps261184;constitutive=1;rank=2 chr2 . CDS 100070 100162 . - 0 ID=Thaps261184;Parent=Thaps261184;rank=1 chr2 ensembl protein_coding_gene 91402 91611 . - . ID=Thaps26889;biotype=protein_coding;description=RL38%2C ribosomal protein 38 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BTA6];external_name=RL38;logic_name=jgi_thaps3 chr2 ensembl transcript 91402 91611 . - . ID=Thaps26889;Parent=Thaps26889;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 91402 91611 . - 0 ID=Thaps26889;Parent=Thaps26889;rank=1 chr2 . exon 91402 91611 . - . ID=Thaps26889.1;Parent=Thaps26889;constitutive=1;rank=1 chr2 . repeat_region 101852 101859 . ? . description=dust chr2 . repeat_region 102351 102400 . ? . description=trf chr2 . repeat_region 102353 102395 . ? . description=trf chr2 . repeat_region 104652 104671 . ? . description=trf chr2 . repeat_region 104652 104671 . ? . description=dust chr2 . repeat_region 106629 106648 . ? . description=trf chr2 . repeat_region 106629 106648 . ? . description=dust chr2 ensembl protein_coding_gene 103273 103884 . + . ID=Thaps2073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTB0];external_name=Thaps2073;logic_name=jgi_thaps3 chr2 ensembl transcript 103273 103884 . + . ID=Thaps2073;Parent=Thaps2073;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 103273 103884 . + 0 ID=Thaps2073;Parent=Thaps2073;rank=1 chr2 . exon 103273 103884 . + . ID=Thaps2073.1;Parent=Thaps2073;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 104466 105537 . - . ID=Thaps2074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTB1];external_name=Thaps2074;logic_name=jgi_thaps3 chr2 ensembl transcript 104466 105537 . - . ID=Thaps2074;Parent=Thaps2074;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 104466 104934 . - 0 ID=Thaps2074;Parent=Thaps2074;rank=3 chr2 . exon 104466 104934 . - . ID=Thaps2074.3;Parent=Thaps2074;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 105021 105096 . - 0 ID=Thaps2074;Parent=Thaps2074;rank=2 chr2 . exon 105021 105096 . - . ID=Thaps2074.2;Parent=Thaps2074;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 105234 105537 . - 0 ID=Thaps2074;Parent=Thaps2074;rank=1 chr2 . exon 105234 105537 . - . ID=Thaps2074.1;Parent=Thaps2074;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 105793 107204 . + . ID=Thaps2075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTB2];external_name=Thaps2075;logic_name=jgi_thaps3 chr2 ensembl transcript 105793 107204 . + . ID=Thaps2075;Parent=Thaps2075;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 105793 106601 . + 0 ID=Thaps2075;Parent=Thaps2075;rank=1 chr2 . exon 105793 106601 . + . ID=Thaps2075.1;Parent=Thaps2075;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 106664 107204 . + 0 ID=Thaps2075;Parent=Thaps2075;rank=2 chr2 . exon 106664 107204 . + . ID=Thaps2075.2;Parent=Thaps2075;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . exon 100070 100162 . - . ID=Thaps261184.1;Parent=Thaps261184;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 107465 108948 . + . ID=Thaps261186;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTB3];external_name=Thaps261186;logic_name=jgi_thaps3 chr2 ensembl transcript 107465 108948 . + . ID=Thaps261186;Parent=Thaps261186;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 107465 107645 . + 0 ID=Thaps261186;Parent=Thaps261186;rank=1 chr2 . exon 107465 107645 . + . ID=Thaps261186.1;Parent=Thaps261186;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 107778 108198 . + 0 ID=Thaps261186;Parent=Thaps261186;rank=2 chr2 . exon 107778 108198 . + . ID=Thaps261186.2;Parent=Thaps261186;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 108300 108948 . + 0 ID=Thaps261186;Parent=Thaps261186;rank=3 chr2 . exon 108300 108948 . + . ID=Thaps261186.3;Parent=Thaps261186;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 100936 101580 . + . ID=Thaps26893;biotype=protein_coding;description=RS18%2C ribosomal protein 18 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BTA9];external_name=RS18;logic_name=jgi_thaps3 chr2 ensembl transcript 100936 101580 . + . ID=Thaps26893;Parent=Thaps26893;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 100936 100937 . + 0 ID=Thaps26893;Parent=Thaps26893;rank=1 chr2 . exon 100936 100937 . + . ID=Thaps26893.1;Parent=Thaps26893;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 101142 101580 . + 0 ID=Thaps26893;Parent=Thaps26893;rank=2 chr2 . exon 101142 101580 . + . ID=Thaps26893.2;Parent=Thaps26893;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 111184 111540 . - . ID=Thaps2078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTB5];external_name=Thaps2078;logic_name=jgi_thaps3 chr2 ensembl transcript 111184 111540 . - . ID=Thaps2078;Parent=Thaps2078;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 111184 111540 . - 0 ID=Thaps2078;Parent=Thaps2078;rank=1 chr2 . exon 111184 111540 . - . ID=Thaps2078.1;Parent=Thaps2078;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 117588 120528 . - . ID=Thaps2081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTB8];external_name=Thaps2081;logic_name=jgi_thaps3 chr2 ensembl transcript 117588 120528 . - . ID=Thaps2081;Parent=Thaps2081;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 117588 118081 . - 0 ID=Thaps2081;Parent=Thaps2081;rank=2 chr2 . exon 117588 118081 . - . ID=Thaps2081.2;Parent=Thaps2081;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 118776 120528 . - 0 ID=Thaps2081;Parent=Thaps2081;rank=1 chr2 . exon 118776 120528 . - . ID=Thaps2081.1;Parent=Thaps2081;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 115242 117261 . + . ID=Thaps21102;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTB7];external_name=Thaps21102;logic_name=jgi_thaps3 chr2 ensembl transcript 115242 117261 . + . ID=Thaps21102;Parent=Thaps21102;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 115242 116366 . + 0 ID=Thaps21102;Parent=Thaps21102;rank=1 chr2 . exon 115242 116366 . + . ID=Thaps21102.1;Parent=Thaps21102;constitutive=1;rank=1 chr2 . CDS 116443 117261 . + 0 ID=Thaps21102;Parent=Thaps21102;rank=2 chr2 . exon 116443 117261 . + . ID=Thaps21102.2;Parent=Thaps21102;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 110165 111040 . - . ID=Thaps233;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTB4];external_name=Thaps233;logic_name=jgi_thaps3 chr2 ensembl transcript 110165 111040 . - . ID=Thaps233;Parent=Thaps233;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 110165 110343 . - 0 ID=Thaps233;Parent=Thaps233;rank=2 chr2 . exon 110165 110343 . - . ID=Thaps233.2;Parent=Thaps233;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 110431 111040 . - 0 ID=Thaps233;Parent=Thaps233;rank=1 chr2 . exon 110431 111040 . - . ID=Thaps233.1;Parent=Thaps233;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 113697 114854 . - . ID=Thaps31845;biotype=protein_coding;description=Lipoic acid synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BTB6];external_name=Thaps31845;logic_name=jgi_thaps3 chr2 ensembl transcript 113697 114854 . - . ID=Thaps31845;Parent=Thaps31845;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 113697 114228 . - 0 ID=Thaps31845;Parent=Thaps31845;rank=2 chr2 . exon 113697 114228 . - . ID=Thaps31845.2;Parent=Thaps31845;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 114262 114854 . - 0 ID=Thaps31845;Parent=Thaps31845;rank=1 chr2 . exon 114262 114854 . - . ID=Thaps31845.1;Parent=Thaps31845;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 122168 122228 . ? . description=dust chr2 . repeat_region 126694 126715 . ? . description=trf chr2 . repeat_region 126694 126715 . ? . description=dust chr2 . repeat_region 126722 126740 . ? . description=dust chr2 . repeat_region 126904 126995 . ? . description=dust chr2 . repeat_region 126951 126974 . ? . description=trf chr2 ensembl protein_coding_gene 124967 125487 . - . ID=Thaps2084;biotype=protein_coding;description=Histone H3 [Source:UniProtKB/TrEMBL%3BAcc:B8BTC1];external_name=H3;logic_name=jgi_thaps3 chr2 ensembl transcript 124967 125487 . - . ID=Thaps2084;Parent=Thaps2084;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 124967 125250 . - 0 ID=Thaps2084;Parent=Thaps2084;rank=2 chr2 . exon 124967 125250 . - . ID=Thaps2084.2;Parent=Thaps2084;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 125478 125487 . - 0 ID=Thaps2084;Parent=Thaps2084;rank=1 chr2 . exon 125478 125487 . - . ID=Thaps2084.1;Parent=Thaps2084;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 125947 128571 . + . ID=Thaps2085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTC2];external_name=Thaps2085;logic_name=jgi_thaps3 chr2 ensembl transcript 125947 128571 . + . ID=Thaps2085;Parent=Thaps2085;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 125947 126305 . + 0 ID=Thaps2085;Parent=Thaps2085;rank=1 chr2 . exon 125947 126305 . + . ID=Thaps2085.1;Parent=Thaps2085;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 126347 127736 . + 0 ID=Thaps2085;Parent=Thaps2085;rank=2 chr2 . exon 126347 127736 . + . ID=Thaps2085.2;Parent=Thaps2085;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 127846 128571 . + 0 ID=Thaps2085;Parent=Thaps2085;rank=3 chr2 . exon 127846 128571 . + . ID=Thaps2085.3;Parent=Thaps2085;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 128820 131219 . + . ID=Thaps2086;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTC3];external_name=Thaps2086;logic_name=jgi_thaps3 chr2 ensembl transcript 128820 131219 . + . ID=Thaps2086;Parent=Thaps2086;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 128820 131219 . + 0 ID=Thaps2086;Parent=Thaps2086;rank=1 chr2 . exon 128820 131219 . + . ID=Thaps2086.1;Parent=Thaps2086;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 122691 124381 . - . ID=Thaps21104;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTC0];external_name=Thaps21104;logic_name=jgi_thaps3 chr2 ensembl transcript 122691 124381 . - . ID=Thaps21104;Parent=Thaps21104;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 122691 123364 . - 0 ID=Thaps21104;Parent=Thaps21104;rank=3 chr2 . exon 122691 123364 . - . ID=Thaps21104.3;Parent=Thaps21104;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 123462 123569 . - 0 ID=Thaps21104;Parent=Thaps21104;rank=2 chr2 . exon 123462 123569 . - . ID=Thaps21104.2;Parent=Thaps21104;constitutive=1;rank=2 chr2 . CDS 123676 124381 . - 0 ID=Thaps21104;Parent=Thaps21104;rank=1 chr2 . exon 123676 124381 . - . ID=Thaps21104.1;Parent=Thaps21104;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 121110 122234 . - . ID=Thaps268157;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTB9];external_name=Thaps268157;logic_name=jgi_thaps3 chr2 ensembl transcript 121110 122234 . - . ID=Thaps268157;Parent=Thaps268157;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 121110 122234 . - 0 ID=Thaps268157;Parent=Thaps268157;rank=1 chr2 . exon 121110 122234 . - . ID=Thaps268157.1;Parent=Thaps268157;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 131444 133831 . - . ID=Thaps2087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTC4];external_name=Thaps2087;logic_name=jgi_thaps3 chr2 ensembl transcript 131444 133831 . - . ID=Thaps2087;Parent=Thaps2087;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 131444 132999 . - 0 ID=Thaps2087;Parent=Thaps2087;rank=3 chr2 . exon 131444 132999 . - . ID=Thaps2087.3;Parent=Thaps2087;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 133091 133320 . - 0 ID=Thaps2087;Parent=Thaps2087;rank=2 chr2 . exon 133091 133320 . - . ID=Thaps2087.2;Parent=Thaps2087;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 133407 133831 . - 0 ID=Thaps2087;Parent=Thaps2087;rank=1 chr2 . exon 133407 133831 . - . ID=Thaps2087.1;Parent=Thaps2087;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 134316 135374 . - . ID=Thaps2088;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTC5];external_name=Thaps2088;logic_name=jgi_thaps3 chr2 ensembl transcript 134316 135374 . - . ID=Thaps2088;Parent=Thaps2088;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 134316 135374 . - 0 ID=Thaps2088;Parent=Thaps2088;rank=1 chr2 . exon 134316 135374 . - . ID=Thaps2088.1;Parent=Thaps2088;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 135993 137813 . + . ID=Thaps21105;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTC6];external_name=Thaps21105;logic_name=jgi_thaps3 chr2 ensembl transcript 135993 137813 . + . ID=Thaps21105;Parent=Thaps21105;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 135993 137813 . + 0 ID=Thaps21105;Parent=Thaps21105;rank=1 chr2 . exon 135993 137813 . + . ID=Thaps21105.1;Parent=Thaps21105;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 138255 139231 . + . ID=Thaps268160;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTC7];external_name=Thaps268160;logic_name=jgi_thaps3 chr2 ensembl transcript 138255 139231 . + . ID=Thaps268160;Parent=Thaps268160;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 138255 138921 . + 0 ID=Thaps268160;Parent=Thaps268160;rank=1 chr2 . exon 138255 138921 . + . ID=Thaps268160.1;Parent=Thaps268160;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 139047 139231 . + 0 ID=Thaps268160;Parent=Thaps268160;rank=2 chr2 . exon 139047 139231 . + . ID=Thaps268160.2;Parent=Thaps268160;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 139938 139960 . ? . description=trf chr2 . repeat_region 139938 139960 . ? . description=dust chr2 . repeat_region 149646 149667 . ? . description=trf chr2 ensembl protein_coding_gene 143721 144989 . - . ID=Thaps2092;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTC9];external_name=MYB13;logic_name=jgi_thaps3 chr2 ensembl transcript 143721 144989 . - . ID=Thaps2092;Parent=Thaps2092;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 143721 144989 . - 0 ID=Thaps2092;Parent=Thaps2092;rank=1 chr2 . exon 143721 144989 . - . ID=Thaps2092.1;Parent=Thaps2092;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 148175 149385 . - . ID=Thaps2094;biotype=protein_coding;description=Cytosine-specific methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BTD1];external_name=Thaps2094;logic_name=jgi_thaps3 chr2 ensembl transcript 148175 149385 . - . ID=Thaps2094;Parent=Thaps2094;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 148175 148210 . - 0 ID=Thaps2094;Parent=Thaps2094;rank=3 chr2 . exon 148175 148210 . - . ID=Thaps2094.3;Parent=Thaps2094;constitutive=1;rank=3 chr2 . CDS 148390 148666 . - 0 ID=Thaps2094;Parent=Thaps2094;rank=2 chr2 . exon 148390 148666 . - . ID=Thaps2094.2;Parent=Thaps2094;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 148739 149385 . - 0 ID=Thaps2094;Parent=Thaps2094;rank=1 chr2 . exon 148739 149385 . - . ID=Thaps2094.1;Parent=Thaps2094;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 149609 151147 . + . ID=Thaps2095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTD2];external_name=Thaps2095;logic_name=jgi_thaps3 chr2 ensembl transcript 149609 151147 . + . ID=Thaps2095;Parent=Thaps2095;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 149609 150182 . + 0 ID=Thaps2095;Parent=Thaps2095;rank=1 chr2 . exon 149609 150182 . + . ID=Thaps2095.1;Parent=Thaps2095;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 150264 151147 . + 0 ID=Thaps2095;Parent=Thaps2095;rank=2 chr2 ensembl protein_coding_gene 145455 147530 . + . ID=Thaps21108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTD0];external_name=Thaps21108;logic_name=jgi_thaps3 chr2 ensembl transcript 145455 147530 . + . ID=Thaps21108;Parent=Thaps21108;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 145455 147530 . + 0 ID=Thaps21108;Parent=Thaps21108;rank=1 chr2 . exon 145455 147530 . + . ID=Thaps21108.1;Parent=Thaps21108;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 140065 141033 . - . ID=Thaps32366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTC8];external_name=Thaps32366;logic_name=jgi_thaps3 chr2 ensembl transcript 140065 141033 . - . ID=Thaps32366;Parent=Thaps32366;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 140065 140556 . - 0 ID=Thaps32366;Parent=Thaps32366;rank=2 chr2 . exon 140065 140556 . - . ID=Thaps32366.2;Parent=Thaps32366;constitutive=1;rank=2 chr2 . CDS 140608 141033 . - 0 ID=Thaps32366;Parent=Thaps32366;rank=1 chr2 . exon 140608 141033 . - . ID=Thaps32366.1;Parent=Thaps32366;constitutive=1;rank=1 chr2 . exon 150264 151147 . + . ID=Thaps2095.2;Parent=Thaps2095;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 153386 154516 . + . ID=Thaps2097;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTD4];external_name=Thaps2097;logic_name=jgi_thaps3 chr2 ensembl transcript 153386 154516 . + . ID=Thaps2097;Parent=Thaps2097;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 153386 154516 . + 0 ID=Thaps2097;Parent=Thaps2097;rank=1 chr2 . exon 153386 154516 . + . ID=Thaps2097.1;Parent=Thaps2097;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 159685 160621 . - . ID=Thaps2100;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTD7];external_name=Thaps2100;logic_name=jgi_thaps3 chr2 ensembl transcript 159685 160621 . - . ID=Thaps2100;Parent=Thaps2100;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 159685 160131 . - 0 ID=Thaps2100;Parent=Thaps2100;rank=2 chr2 . exon 159685 160131 . - . ID=Thaps2100.2;Parent=Thaps2100;constitutive=1;rank=2 chr2 . CDS 160214 160621 . - 0 ID=Thaps2100;Parent=Thaps2100;rank=1 chr2 ensembl protein_coding_gene 151241 153168 . - . ID=Thaps21109;biotype=protein_coding;description=Sphingosine kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BTD3];external_name=Thaps21109;logic_name=jgi_thaps3 chr2 ensembl transcript 151241 153168 . - . ID=Thaps21109;Parent=Thaps21109;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 151241 151472 . - 0 ID=Thaps21109;Parent=Thaps21109;rank=4 chr2 . exon 151241 151472 . - . ID=Thaps21109.4;Parent=Thaps21109;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 151563 151996 . - 0 ID=Thaps21109;Parent=Thaps21109;rank=3 chr2 . exon 151563 151996 . - . ID=Thaps21109.3;Parent=Thaps21109;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 152087 152244 . - 0 ID=Thaps21109;Parent=Thaps21109;rank=2 chr2 . exon 152087 152244 . - . ID=Thaps21109.2;Parent=Thaps21109;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 152394 153168 . - 0 ID=Thaps21109;Parent=Thaps21109;rank=1 chr2 . exon 152394 153168 . - . ID=Thaps21109.1;Parent=Thaps21109;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 155782 159611 . + . ID=Thaps21110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTD6];external_name=Thaps21110;logic_name=jgi_thaps3 chr2 ensembl transcript 155782 159611 . + . ID=Thaps21110;Parent=Thaps21110;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 155782 156002 . + 0 ID=Thaps21110;Parent=Thaps21110;rank=1 chr2 . exon 155782 156002 . + . ID=Thaps21110.1;Parent=Thaps21110;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 156156 157277 . + 0 ID=Thaps21110;Parent=Thaps21110;rank=2 chr2 . exon 156156 157277 . + . ID=Thaps21110.2;Parent=Thaps21110;constitutive=1;rank=2 chr2 . CDS 157413 157420 . + 0 ID=Thaps21110;Parent=Thaps21110;rank=3 chr2 . exon 157413 157420 . + . ID=Thaps21110.3;Parent=Thaps21110;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 157756 158171 . + 0 ID=Thaps21110;Parent=Thaps21110;rank=4 chr2 . exon 157756 158171 . + . ID=Thaps21110.4;Parent=Thaps21110;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 158262 159338 . + 0 ID=Thaps21110;Parent=Thaps21110;rank=5 chr2 . exon 158262 159338 . + . ID=Thaps21110.5;Parent=Thaps21110;constitutive=1;rank=5 chr2 . CDS 159411 159611 . + 0 ID=Thaps21110;Parent=Thaps21110;rank=6 chr2 . exon 159411 159611 . + . ID=Thaps21110.6;Parent=Thaps21110;constitutive=1;rank=6 chr2 ensembl protein_coding_gene 154564 155535 . - . ID=Thaps261201;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTD5];external_name=Thaps261201;logic_name=jgi_thaps3 chr2 ensembl transcript 154564 155535 . - . ID=Thaps261201;Parent=Thaps261201;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 154564 154797 . - 0 ID=Thaps261201;Parent=Thaps261201;rank=5 chr2 . exon 154564 154797 . - . ID=Thaps261201.5;Parent=Thaps261201;constitutive=1;rank=5 chr2 . CDS 154882 154997 . - 0 ID=Thaps261201;Parent=Thaps261201;rank=4 chr2 . exon 154882 154997 . - . ID=Thaps261201.4;Parent=Thaps261201;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 155091 155214 . - 0 ID=Thaps261201;Parent=Thaps261201;rank=3 chr2 . exon 155091 155214 . - . ID=Thaps261201.3;Parent=Thaps261201;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 155251 155342 . - 0 ID=Thaps261201;Parent=Thaps261201;rank=2 chr2 . exon 155251 155342 . - . ID=Thaps261201.2;Parent=Thaps261201;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 155397 155535 . - 0 ID=Thaps261201;Parent=Thaps261201;rank=1 chr2 . exon 155397 155535 . - . ID=Thaps261201.1;Parent=Thaps261201;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 163062 163070 . ? . description=dust chr2 . repeat_region 165353 165360 . ? . description=dust chr2 . exon 160214 160621 . - . ID=Thaps2100.1;Parent=Thaps2100;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 169686 170167 . - . ID=Thaps261203;biotype=protein_coding;description=Peptide methionine sulfoxide reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BTD9];external_name=Thaps261203;logic_name=jgi_thaps3 chr2 ensembl transcript 169686 170167 . - . ID=Thaps261203;Parent=Thaps261203;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 169686 170167 . - 0 ID=Thaps261203;Parent=Thaps261203;rank=1 chr2 . exon 169686 170167 . - . ID=Thaps261203.1;Parent=Thaps261203;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 167699 168801 . + . ID=Thaps31938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTD8];external_name=Thaps31938;logic_name=jgi_thaps3 chr2 ensembl transcript 167699 168801 . + . ID=Thaps31938;Parent=Thaps31938;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 167699 167998 . + 0 ID=Thaps31938;Parent=Thaps31938;rank=1 chr2 . exon 167699 167998 . + . ID=Thaps31938.1;Parent=Thaps31938;constitutive=1;rank=1 chr2 . CDS 168113 168511 . + 0 ID=Thaps31938;Parent=Thaps31938;rank=2 chr2 . exon 168113 168511 . + . ID=Thaps31938.2;Parent=Thaps31938;constitutive=1;rank=2 chr2 . CDS 168601 168801 . + 0 ID=Thaps31938;Parent=Thaps31938;rank=3 chr2 . exon 168601 168801 . + . ID=Thaps31938.3;Parent=Thaps31938;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 173963 179470 . + . ID=Thaps21114;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE1];external_name=Thaps21114;logic_name=jgi_thaps3 chr2 ensembl transcript 173963 179470 . + . ID=Thaps21114;Parent=Thaps21114;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 173963 178245 . + 0 ID=Thaps21114;Parent=Thaps21114;rank=1 chr2 . exon 173963 178245 . + . ID=Thaps21114.1;Parent=Thaps21114;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 178328 178973 . + 0 ID=Thaps21114;Parent=Thaps21114;rank=2 chr2 . exon 178328 178973 . + . ID=Thaps21114.2;Parent=Thaps21114;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 179135 179470 . + 0 ID=Thaps21114;Parent=Thaps21114;rank=3 chr2 . exon 179135 179470 . + . ID=Thaps21114.3;Parent=Thaps21114;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 172993 173247 . + . ID=Thaps31722;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE0];external_name=Thaps31722;logic_name=jgi_thaps3 chr2 ensembl transcript 172993 173247 . + . ID=Thaps31722;Parent=Thaps31722;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 172993 173247 . + 0 ID=Thaps31722;Parent=Thaps31722;rank=1 chr2 . exon 172993 173247 . + . ID=Thaps31722.1;Parent=Thaps31722;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 185003 186367 . + . ID=Thaps2107;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE4];external_name=Thaps2107;logic_name=jgi_thaps3 chr2 ensembl transcript 185003 186367 . + . ID=Thaps2107;Parent=Thaps2107;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 185003 185973 . + 0 ID=Thaps2107;Parent=Thaps2107;rank=1 chr2 . exon 185003 185973 . + . ID=Thaps2107.1;Parent=Thaps2107;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 186046 186367 . + 0 ID=Thaps2107;Parent=Thaps2107;rank=2 chr2 . exon 186046 186367 . + . ID=Thaps2107.2;Parent=Thaps2107;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 180344 180939 . + . ID=Thaps261205;biotype=protein_coding;description=50S ribosomal protein l19-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE2];external_name=Thaps261205;logic_name=jgi_thaps3 chr2 ensembl transcript 180344 180939 . + . ID=Thaps261205;Parent=Thaps261205;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 180344 180804 . + 0 ID=Thaps261205;Parent=Thaps261205;rank=1 chr2 . exon 180344 180804 . + . ID=Thaps261205.1;Parent=Thaps261205;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 180873 180939 . + 0 ID=Thaps261205;Parent=Thaps261205;rank=2 chr2 . exon 180873 180939 . + . ID=Thaps261205.2;Parent=Thaps261205;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 183714 184112 . + . ID=Thaps268167;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE3];external_name=Thaps268167;logic_name=jgi_thaps3 chr2 ensembl transcript 183714 184112 . + . ID=Thaps268167;Parent=Thaps268167;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 183714 184112 . + 0 ID=Thaps268167;Parent=Thaps268167;rank=1 chr2 . exon 183714 184112 . + . ID=Thaps268167.1;Parent=Thaps268167;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 191690 194126 . - . ID=Thaps21117;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE5];external_name=Thaps21117;logic_name=jgi_thaps3 chr2 ensembl transcript 191690 194126 . - . ID=Thaps21117;Parent=Thaps21117;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 191690 192440 . - 0 ID=Thaps21117;Parent=Thaps21117;rank=3 chr2 . exon 191690 192440 . - . ID=Thaps21117.3;Parent=Thaps21117;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 192491 194000 . - 0 ID=Thaps21117;Parent=Thaps21117;rank=2 chr2 . exon 192491 194000 . - . ID=Thaps21117.2;Parent=Thaps21117;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 194099 194126 . - 0 ID=Thaps21117;Parent=Thaps21117;rank=1 chr2 . exon 194099 194126 . - . ID=Thaps21117.1;Parent=Thaps21117;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 196450 198312 . - . ID=Thaps21119;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE7];external_name=Thaps21119;logic_name=jgi_thaps3 chr2 ensembl transcript 196450 198312 . - . ID=Thaps21119;Parent=Thaps21119;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 196450 196569 . - 0 ID=Thaps21119;Parent=Thaps21119;rank=2 chr2 . exon 196450 196569 . - . ID=Thaps21119.2;Parent=Thaps21119;constitutive=1;rank=2 chr2 . CDS 196648 198312 . - 0 ID=Thaps21119;Parent=Thaps21119;rank=1 chr2 . exon 196648 198312 . - . ID=Thaps21119.1;Parent=Thaps21119;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 198653 198943 . - . ID=Thaps31993;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE8];external_name=Thaps31993;logic_name=jgi_thaps3 chr2 ensembl transcript 198653 198943 . - . ID=Thaps31993;Parent=Thaps31993;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 198653 198943 . - 0 ID=Thaps31993;Parent=Thaps31993;rank=1 chr2 . exon 198653 198943 . - . ID=Thaps31993.1;Parent=Thaps31993;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 195747 196286 . + . ID=Thaps32507;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE6];external_name=Thaps32507;logic_name=jgi_thaps3 chr2 ensembl transcript 195747 196286 . + . ID=Thaps32507;Parent=Thaps32507;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 195747 196286 . + 0 ID=Thaps32507;Parent=Thaps32507;rank=1 chr2 . exon 195747 196286 . + . ID=Thaps32507.1;Parent=Thaps32507;constitutive=1;rank=1 chr2 . repeat_region 200810 200830 . ? . description=trf chr2 . repeat_region 200810 200830 . ? . description=dust chr2 . repeat_region 201010 201073 . ? . description=dust chr2 . repeat_region 202706 202737 . ? . description=trf chr2 . repeat_region 202731 202766 . ? . description=trf chr2 . repeat_region 205487 205510 . ? . description=trf chr2 . repeat_region 205487 205510 . ? . description=dust chr2 . repeat_region 206568 206609 . ? . description=dust chr2 . repeat_region 206801 206836 . ? . description=trf chr2 . repeat_region 207443 207482 . ? . description=dust chr2 . repeat_region 207448 207482 . ? . description=trf chr2 . repeat_region 207688 207717 . ? . description=trf chr2 . repeat_region 207692 207717 . ? . description=dust chr2 . repeat_region 208182 208210 . ? . description=dust chr2 . repeat_region 208183 208208 . ? . description=trf chr2 ensembl protein_coding_gene 207097 213638 . + . ID=Thaps21122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTF2];external_name=Thaps21122;logic_name=jgi_thaps3 chr2 ensembl transcript 207097 213638 . + . ID=Thaps21122;Parent=Thaps21122;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 207097 208275 . + 0 ID=Thaps21122;Parent=Thaps21122;rank=1 chr2 . exon 207097 208275 . + . ID=Thaps21122.1;Parent=Thaps21122;constitutive=1;rank=1 chr2 . CDS 208395 209275 . + 0 ID=Thaps21122;Parent=Thaps21122;rank=2 chr2 . exon 208395 209275 . + . ID=Thaps21122.2;Parent=Thaps21122;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 209364 210253 . + 0 ID=Thaps21122;Parent=Thaps21122;rank=3 chr2 . exon 209364 210253 . + . ID=Thaps21122.3;Parent=Thaps21122;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 210346 210754 . + 0 ID=Thaps21122;Parent=Thaps21122;rank=4 chr2 . CDS 210843 211686 . + 0 ID=Thaps21122;Parent=Thaps21122;rank=5 chr2 . CDS 211776 213160 . + 0 ID=Thaps21122;Parent=Thaps21122;rank=6 chr2 . CDS 213248 213638 . + 0 ID=Thaps21122;Parent=Thaps21122;rank=7 chr2 ensembl protein_coding_gene 205541 206758 . - . ID=Thaps2116;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTF1];external_name=Thaps2116;logic_name=jgi_thaps3 chr2 ensembl transcript 205541 206758 . - . ID=Thaps2116;Parent=Thaps2116;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 205541 206758 . - 0 ID=Thaps2116;Parent=Thaps2116;rank=1 chr2 . exon 205541 206758 . - . ID=Thaps2116.1;Parent=Thaps2116;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 203534 205370 . + . ID=Thaps26926;biotype=protein_coding;description=RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BTF0];external_name=Thaps26926;logic_name=jgi_thaps3 chr2 ensembl transcript 203534 205370 . + . ID=Thaps26926;Parent=Thaps26926;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 203534 204762 . + 0 ID=Thaps26926;Parent=Thaps26926;rank=1 chr2 . exon 203534 204762 . + . ID=Thaps26926.1;Parent=Thaps26926;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 204869 205370 . + 0 ID=Thaps26926;Parent=Thaps26926;rank=2 chr2 . exon 204869 205370 . + . ID=Thaps26926.2;Parent=Thaps26926;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 202537 203216 . - . ID=Thaps32339;biotype=protein_coding;description=Transcription initiation protein spt4-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTE9];external_name=Thaps32339;logic_name=jgi_thaps3 chr2 ensembl transcript 202537 203216 . - . ID=Thaps32339;Parent=Thaps32339;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 202537 202689 . - 0 ID=Thaps32339;Parent=Thaps32339;rank=3 chr2 . exon 202537 202689 . - . ID=Thaps32339.3;Parent=Thaps32339;constitutive=1;rank=3 chr2 . CDS 202884 202970 . - 0 ID=Thaps32339;Parent=Thaps32339;rank=2 chr2 . exon 202884 202970 . - . ID=Thaps32339.2;Parent=Thaps32339;constitutive=1;rank=2 chr2 . CDS 203103 203216 . - 0 ID=Thaps32339;Parent=Thaps32339;rank=1 chr2 . exon 203103 203216 . - . ID=Thaps32339.1;Parent=Thaps32339;constitutive=1;rank=1 chr2 . exon 210346 210754 . + . ID=Thaps21122.4;Parent=Thaps21122;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . exon 210843 211686 . + . ID=Thaps21122.5;Parent=Thaps21122;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . exon 211776 213160 . + . ID=Thaps21122.6;Parent=Thaps21122;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . exon 213248 213638 . + . ID=Thaps21122.7;Parent=Thaps21122;constitutive=1;ensembl_end_phase=1;rank=7 chr2 ensembl protein_coding_gene 213915 217101 . - . ID=Thaps2118;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTF3];external_name=Thaps2118;logic_name=jgi_thaps3 chr2 ensembl transcript 213915 217101 . - . ID=Thaps2118;Parent=Thaps2118;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 213915 214150 . - 0 ID=Thaps2118;Parent=Thaps2118;rank=2 chr2 . exon 213915 214150 . - . ID=Thaps2118.2;Parent=Thaps2118;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 214230 217101 . - 0 ID=Thaps2118;Parent=Thaps2118;rank=1 chr2 . exon 214230 217101 . - . ID=Thaps2118.1;Parent=Thaps2118;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 217495 219603 . - . ID=Thaps2119;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTF4];external_name=Thaps2119;logic_name=jgi_thaps3 chr2 ensembl transcript 217495 219603 . - . ID=Thaps2119;Parent=Thaps2119;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 217495 219603 . - 0 ID=Thaps2119;Parent=Thaps2119;rank=1 chr2 . exon 217495 219603 . - . ID=Thaps2119.1;Parent=Thaps2119;constitutive=1;rank=1 chr2 . repeat_region 220430 220478 . ? . description=dust chr2 . repeat_region 220432 220478 . ? . description=trf chr2 . repeat_region 224576 224583 . ? . description=dust chr2 . repeat_region 226678 226754 . - . description=Harbinger1_TP chr2 . repeat_region 226737 226744 . ? . description=dust chr2 ensembl protein_coding_gene 219857 226600 . + . ID=Thaps2120;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTF5];external_name=Thaps2120;logic_name=jgi_thaps3 chr2 ensembl transcript 219857 226600 . + . ID=Thaps2120;Parent=Thaps2120;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 219857 226600 . + 0 ID=Thaps2120;Parent=Thaps2120;rank=1 chr2 . exon 219857 226600 . + . ID=Thaps2120.1;Parent=Thaps2120;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 229238 231562 . - . ID=Thaps2122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTF7];external_name=Thaps2122;logic_name=jgi_thaps3 chr2 ensembl transcript 229238 231562 . - . ID=Thaps2122;Parent=Thaps2122;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 229238 231562 . - 0 ID=Thaps2122;Parent=Thaps2122;rank=1 chr2 . exon 229238 231562 . - . ID=Thaps2122.1;Parent=Thaps2122;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 227445 228526 . + . ID=Thaps31710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTF6];external_name=Thaps31710;logic_name=jgi_thaps3 chr2 ensembl transcript 227445 228526 . + . ID=Thaps31710;Parent=Thaps31710;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 227445 227744 . + 0 ID=Thaps31710;Parent=Thaps31710;rank=1 chr2 . exon 227445 227744 . + . ID=Thaps31710.1;Parent=Thaps31710;constitutive=1;rank=1 chr2 . CDS 227862 227952 . + 0 ID=Thaps31710;Parent=Thaps31710;rank=2 chr2 . exon 227862 227952 . + . ID=Thaps31710.2;Parent=Thaps31710;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 228054 228526 . + 0 ID=Thaps31710;Parent=Thaps31710;rank=3 chr2 . exon 228054 228526 . + . ID=Thaps31710.3;Parent=Thaps31710;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 236084 242542 . - . ID=Thaps21124;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTG0];external_name=Thaps21124;logic_name=jgi_thaps3 chr2 ensembl transcript 236084 242542 . - . ID=Thaps21124;Parent=Thaps21124;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 236084 238054 . - 0 ID=Thaps21124;Parent=Thaps21124;rank=3 chr2 . exon 236084 238054 . - . ID=Thaps21124.3;Parent=Thaps21124;constitutive=1;rank=3 chr2 . CDS 238131 239711 . - 0 ID=Thaps21124;Parent=Thaps21124;rank=2 chr2 . exon 238131 239711 . - . ID=Thaps21124.2;Parent=Thaps21124;constitutive=1;rank=2 chr2 . CDS 239753 242542 . - 0 ID=Thaps21124;Parent=Thaps21124;rank=1 chr2 . exon 239753 242542 . - . ID=Thaps21124.1;Parent=Thaps21124;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 233906 235906 . + . ID=Thaps2124;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTF9];external_name=Thaps2124;logic_name=jgi_thaps3 chr2 ensembl transcript 233906 235906 . + . ID=Thaps2124;Parent=Thaps2124;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 233906 234081 . + 0 ID=Thaps2124;Parent=Thaps2124;rank=1 chr2 . exon 233906 234081 . + . ID=Thaps2124.1;Parent=Thaps2124;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 234205 234486 . + 0 ID=Thaps2124;Parent=Thaps2124;rank=2 chr2 . exon 234205 234486 . + . ID=Thaps2124.2;Parent=Thaps2124;constitutive=1;rank=2 chr2 . CDS 234511 234601 . + 0 ID=Thaps2124;Parent=Thaps2124;rank=3 chr2 . exon 234511 234601 . + . ID=Thaps2124.3;Parent=Thaps2124;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 234689 235376 . + 0 ID=Thaps2124;Parent=Thaps2124;rank=4 chr2 . exon 234689 235376 . + . ID=Thaps2124.4;Parent=Thaps2124;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 235458 235906 . + 0 ID=Thaps2124;Parent=Thaps2124;rank=5 chr2 . exon 235458 235906 . + . ID=Thaps2124.5;Parent=Thaps2124;constitutive=1;ensembl_end_phase=2;rank=5 chr2 ensembl protein_coding_gene 232502 233350 . + . ID=Thaps261211;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTF8];external_name=Thaps261211;logic_name=jgi_thaps3 chr2 ensembl transcript 232502 233350 . + . ID=Thaps261211;Parent=Thaps261211;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 232502 232693 . + 0 ID=Thaps261211;Parent=Thaps261211;rank=1 chr2 . exon 232502 232693 . + . ID=Thaps261211.1;Parent=Thaps261211;constitutive=1;rank=1 chr2 . CDS 232794 233350 . + 0 ID=Thaps261211;Parent=Thaps261211;rank=2 chr2 . exon 232794 233350 . + . ID=Thaps261211.2;Parent=Thaps261211;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 244357 244400 . ? . description=trf chr2 . repeat_region 244375 244382 . ? . description=dust chr2 ensembl protein_coding_gene 244317 244607 . - . ID=Thaps20069;biotype=protein_coding;description=60S ACIDIC ribosomal protein P2 [Source:UniProtKB/TrEMBL%3BAcc:B8BTG2];external_name=Thaps20069;logic_name=jgi_thaps3 chr2 ensembl transcript 244317 244607 . - . ID=Thaps20069;Parent=Thaps20069;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 244317 244607 . - 0 ID=Thaps20069;Parent=Thaps20069;rank=1 chr2 . exon 244317 244607 . - . ID=Thaps20069.1;Parent=Thaps20069;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 248471 248620 . + . ID=Thaps20541;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTG4];external_name=Thaps20541;logic_name=jgi_thaps3 chr2 ensembl transcript 248471 248620 . + . ID=Thaps20541;Parent=Thaps20541;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 248471 248620 . + 0 ID=Thaps20541;Parent=Thaps20541;rank=1 chr2 . exon 248471 248620 . + . ID=Thaps20541.1;Parent=Thaps20541;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 242855 244021 . + . ID=Thaps2126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTG1];external_name=Thaps2126;logic_name=jgi_thaps3 chr2 ensembl transcript 242855 244021 . + . ID=Thaps2126;Parent=Thaps2126;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 242855 244021 . + 0 ID=Thaps2126;Parent=Thaps2126;rank=1 chr2 . exon 242855 244021 . + . ID=Thaps2126.1;Parent=Thaps2126;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 245552 247954 . - . ID=Thaps2128;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTG3];external_name=Thaps2128;logic_name=jgi_thaps3 chr2 ensembl transcript 245552 247954 . - . ID=Thaps2128;Parent=Thaps2128;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 245552 247954 . - 0 ID=Thaps2128;Parent=Thaps2128;rank=1 chr2 . exon 245552 247954 . - . ID=Thaps2128.1;Parent=Thaps2128;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 249158 250318 . + . ID=Thaps2130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTG5];external_name=Thaps2130;logic_name=jgi_thaps3 chr2 ensembl transcript 249158 250318 . + . ID=Thaps2130;Parent=Thaps2130;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 249158 250318 . + 0 ID=Thaps2130;Parent=Thaps2130;rank=1 chr2 . exon 249158 250318 . + . ID=Thaps2130.1;Parent=Thaps2130;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 250418 254636 . - . ID=Thaps2131;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTG6];external_name=Thaps2131;logic_name=jgi_thaps3 chr2 ensembl transcript 250418 254636 . - . ID=Thaps2131;Parent=Thaps2131;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 250418 251328 . - 0 ID=Thaps2131;Parent=Thaps2131;rank=2 chr2 . exon 250418 251328 . - . ID=Thaps2131.2;Parent=Thaps2131;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 251576 254636 . - 0 ID=Thaps2131;Parent=Thaps2131;rank=1 chr2 . exon 251576 254636 . - . ID=Thaps2131.1;Parent=Thaps2131;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 254942 259889 . + . ID=Thaps2132;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTG7];external_name=Thaps2132;logic_name=jgi_thaps3 chr2 ensembl transcript 254942 259889 . + . ID=Thaps2132;Parent=Thaps2132;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 254942 255157 . + 0 ID=Thaps2132;Parent=Thaps2132;rank=1 chr2 . exon 254942 255157 . + . ID=Thaps2132.1;Parent=Thaps2132;constitutive=1;rank=1 chr2 . CDS 255183 257583 . + 0 ID=Thaps2132;Parent=Thaps2132;rank=2 chr2 . exon 255183 257583 . + . ID=Thaps2132.2;Parent=Thaps2132;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 257675 258950 . + 0 ID=Thaps2132;Parent=Thaps2132;rank=3 chr2 . exon 257675 258950 . + . ID=Thaps2132.3;Parent=Thaps2132;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 259026 259475 . + 0 ID=Thaps2132;Parent=Thaps2132;rank=4 chr2 . exon 259026 259475 . + . ID=Thaps2132.4;Parent=Thaps2132;constitutive=1;rank=4 chr2 . CDS 259562 259889 . + 0 ID=Thaps2132;Parent=Thaps2132;rank=5 chr2 . exon 259562 259889 . + . ID=Thaps2132.5;Parent=Thaps2132;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . repeat_region 263905 263912 . ? . description=dust chr2 ensembl protein_coding_gene 268736 270145 . + . ID=Thaps21126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTH2];external_name=Thaps21126;logic_name=jgi_thaps3 chr2 ensembl transcript 268736 270145 . + . ID=Thaps21126;Parent=Thaps21126;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 268736 270145 . + 0 ID=Thaps21126;Parent=Thaps21126;rank=1 chr2 . exon 268736 270145 . + . ID=Thaps21126.1;Parent=Thaps21126;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 259913 261799 . - . ID=Thaps2133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTG8];external_name=Thaps2133;logic_name=jgi_thaps3 chr2 ensembl transcript 259913 261799 . - . ID=Thaps2133;Parent=Thaps2133;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 259913 261323 . - 0 ID=Thaps2133;Parent=Thaps2133;rank=2 chr2 . exon 259913 261323 . - . ID=Thaps2133.2;Parent=Thaps2133;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 261405 261799 . - 0 ID=Thaps2133;Parent=Thaps2133;rank=1 chr2 . exon 261405 261799 . - . ID=Thaps2133.1;Parent=Thaps2133;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 264060 264512 . - . ID=Thaps261217;biotype=protein_coding;description=Spindle assembly checkpoint serine/threonine-protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BTH0];external_name=Thaps261217;logic_name=jgi_thaps3 chr2 ensembl transcript 264060 264512 . - . ID=Thaps261217;Parent=Thaps261217;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 264060 264512 . - 0 ID=Thaps261217;Parent=Thaps261217;rank=1 chr2 . exon 264060 264512 . - . ID=Thaps261217.1;Parent=Thaps261217;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 265224 268139 . - . ID=Thaps261219;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTH1];external_name=Thaps261219;logic_name=jgi_thaps3 chr2 ensembl transcript 265224 268139 . - . ID=Thaps261219;Parent=Thaps261219;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 265224 265900 . - 0 ID=Thaps261219;Parent=Thaps261219;rank=3 chr2 . exon 265224 265900 . - . ID=Thaps261219.3;Parent=Thaps261219;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 266231 266782 . - 0 ID=Thaps261219;Parent=Thaps261219;rank=2 chr2 . exon 266231 266782 . - . ID=Thaps261219.2;Parent=Thaps261219;constitutive=1;rank=2 chr2 . CDS 266895 268139 . - 0 ID=Thaps261219;Parent=Thaps261219;rank=1 chr2 . exon 266895 268139 . - . ID=Thaps261219.1;Parent=Thaps261219;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 262519 263557 . - . ID=Thaps31907;biotype=protein_coding;description=4-diphosphocytidyl-2c-methyl-d-erythritol kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BTG9];external_name=Thaps31907;logic_name=jgi_thaps3 chr2 ensembl transcript 262519 263557 . - . ID=Thaps31907;Parent=Thaps31907;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 262519 263037 . - 0 ID=Thaps31907;Parent=Thaps31907;rank=2 chr2 . exon 262519 263037 . - . ID=Thaps31907.2;Parent=Thaps31907;constitutive=1;rank=2 chr2 . CDS 263186 263557 . - 0 ID=Thaps31907;Parent=Thaps31907;rank=1 chr2 . exon 263186 263557 . - . ID=Thaps31907.1;Parent=Thaps31907;constitutive=1;rank=1 chr2 . repeat_region 278825 278854 . ? . description=trf chr2 . repeat_region 279119 279163 . ? . description=trf chr2 ensembl protein_coding_gene 277679 278745 . - . ID=Thaps21129;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTH6];external_name=Thaps21129;logic_name=jgi_thaps3 chr2 ensembl transcript 277679 278745 . - . ID=Thaps21129;Parent=Thaps21129;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 277679 278118 . - 0 ID=Thaps21129;Parent=Thaps21129;rank=2 chr2 . exon 277679 278118 . - . ID=Thaps21129.2;Parent=Thaps21129;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 278499 278745 . - 0 ID=Thaps21129;Parent=Thaps21129;rank=1 chr2 . exon 278499 278745 . - . ID=Thaps21129.1;Parent=Thaps21129;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 273033 275766 . - . ID=Thaps2137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTH4];external_name=Thaps2137;logic_name=jgi_thaps3 chr2 ensembl transcript 273033 275766 . - . ID=Thaps2137;Parent=Thaps2137;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 273033 273166 . - 0 ID=Thaps2137;Parent=Thaps2137;rank=5 chr2 . exon 273033 273166 . - . ID=Thaps2137.5;Parent=Thaps2137;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 273238 274280 . - 0 ID=Thaps2137;Parent=Thaps2137;rank=4 chr2 . exon 273238 274280 . - . ID=Thaps2137.4;Parent=Thaps2137;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 274369 275124 . - 0 ID=Thaps2137;Parent=Thaps2137;rank=3 chr2 . exon 274369 275124 . - . ID=Thaps2137.3;Parent=Thaps2137;constitutive=1;rank=3 chr2 . CDS 275210 275321 . - 0 ID=Thaps2137;Parent=Thaps2137;rank=2 chr2 . exon 275210 275321 . - . ID=Thaps2137.2;Parent=Thaps2137;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 275487 275766 . - 0 ID=Thaps2137;Parent=Thaps2137;rank=1 chr2 . exon 275487 275766 . - . ID=Thaps2137.1;Parent=Thaps2137;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 270653 271611 . + . ID=Thaps268172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTH3];external_name=Thaps268172;logic_name=jgi_thaps3 chr2 ensembl transcript 270653 271611 . + . ID=Thaps268172;Parent=Thaps268172;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 270653 270944 . + 0 ID=Thaps268172;Parent=Thaps268172;rank=1 chr2 . exon 270653 270944 . + . ID=Thaps268172.1;Parent=Thaps268172;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 271037 271350 . + 0 ID=Thaps268172;Parent=Thaps268172;rank=2 chr2 . exon 271037 271350 . + . ID=Thaps268172.2;Parent=Thaps268172;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 271438 271611 . + 0 ID=Thaps268172;Parent=Thaps268172;rank=3 chr2 . exon 271438 271611 . + . ID=Thaps268172.3;Parent=Thaps268172;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 276672 277229 . + . ID=Thaps26931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTH5];external_name=Thaps26931;logic_name=jgi_thaps3 chr2 ensembl transcript 276672 277229 . + . ID=Thaps26931;Parent=Thaps26931;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 276672 277229 . + 0 ID=Thaps26931;Parent=Thaps26931;rank=1 chr2 . exon 276672 277229 . + . ID=Thaps26931.1;Parent=Thaps26931;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 279045 280259 . + . ID=Thaps32037;biotype=protein_coding;description=26S proteasome ATPase regulatory subunit 6 [Source:UniProtKB/TrEMBL%3BAcc:B8BTH7];external_name=RPT6;logic_name=jgi_thaps3 chr2 ensembl transcript 279045 280259 . + . ID=Thaps32037;Parent=Thaps32037;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 279045 280259 . + 0 ID=Thaps32037;Parent=Thaps32037;rank=1 chr2 . exon 279045 280259 . + . ID=Thaps32037.1;Parent=Thaps32037;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 282252 285396 . + . ID=Thaps21130;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTH9];external_name=Thaps21130;logic_name=jgi_thaps3 chr2 ensembl transcript 282252 285396 . + . ID=Thaps21130;Parent=Thaps21130;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 282252 282875 . + 0 ID=Thaps21130;Parent=Thaps21130;rank=1 chr2 . exon 282252 282875 . + . ID=Thaps21130.1;Parent=Thaps21130;constitutive=1;rank=1 chr2 . CDS 282949 283468 . + 0 ID=Thaps21130;Parent=Thaps21130;rank=2 chr2 . exon 282949 283468 . + . ID=Thaps21130.2;Parent=Thaps21130;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 283773 285136 . + 0 ID=Thaps21130;Parent=Thaps21130;rank=3 chr2 . exon 283773 285136 . + . ID=Thaps21130.3;Parent=Thaps21130;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 285196 285396 . + 0 ID=Thaps21130;Parent=Thaps21130;rank=4 chr2 . exon 285196 285396 . + . ID=Thaps21130.4;Parent=Thaps21130;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 285896 286619 . - . ID=Thaps21131;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTI0];external_name=Thaps21131;logic_name=jgi_thaps3 chr2 ensembl transcript 285896 286619 . - . ID=Thaps21131;Parent=Thaps21131;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 285896 285946 . - 0 ID=Thaps21131;Parent=Thaps21131;rank=2 chr2 . exon 285896 285946 . - . ID=Thaps21131.2;Parent=Thaps21131;constitutive=1;rank=2 chr2 . CDS 285975 286619 . - 0 ID=Thaps21131;Parent=Thaps21131;rank=1 chr2 . exon 285975 286619 . - . ID=Thaps21131.1;Parent=Thaps21131;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 280534 281848 . - . ID=Thaps2141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTH8];external_name=Thaps2141;logic_name=jgi_thaps3 chr2 ensembl transcript 280534 281848 . - . ID=Thaps2141;Parent=Thaps2141;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 280534 280634 . - 0 ID=Thaps2141;Parent=Thaps2141;rank=3 chr2 . exon 280534 280634 . - . ID=Thaps2141.3;Parent=Thaps2141;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 280668 281245 . - 0 ID=Thaps2141;Parent=Thaps2141;rank=2 chr2 . exon 280668 281245 . - . ID=Thaps2141.2;Parent=Thaps2141;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 281316 281848 . - 0 ID=Thaps2141;Parent=Thaps2141;rank=1 chr2 . exon 281316 281848 . - . ID=Thaps2141.1;Parent=Thaps2141;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 289044 292278 . - . ID=Thaps2145;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTI2];external_name=Thaps2145;logic_name=jgi_thaps3 chr2 ensembl transcript 289044 292278 . - . ID=Thaps2145;Parent=Thaps2145;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 289044 289144 . - 0 ID=Thaps2145;Parent=Thaps2145;rank=7 chr2 . exon 289044 289144 . - . ID=Thaps2145.7;Parent=Thaps2145;constitutive=1;ensembl_end_phase=2;rank=7 chr2 . CDS 289212 289465 . - 0 ID=Thaps2145;Parent=Thaps2145;rank=6 chr2 . exon 289212 289465 . - . ID=Thaps2145.6;Parent=Thaps2145;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 289560 289611 . - 0 ID=Thaps2145;Parent=Thaps2145;rank=5 chr2 . exon 289560 289611 . - . ID=Thaps2145.5;Parent=Thaps2145;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 289701 289937 . - 0 ID=Thaps2145;Parent=Thaps2145;rank=4 chr2 . exon 289701 289937 . - . ID=Thaps2145.4;Parent=Thaps2145;constitutive=1;rank=4 chr2 . CDS 290014 290736 . - 0 ID=Thaps2145;Parent=Thaps2145;rank=3 chr2 . CDS 290959 291638 . - 0 ID=Thaps2145;Parent=Thaps2145;rank=2 chr2 . CDS 291719 292278 . - 0 ID=Thaps2145;Parent=Thaps2145;rank=1 chr2 ensembl protein_coding_gene 287461 288888 . + . ID=Thaps240;biotype=protein_coding;description=Cysteine desulfurase [Source:UniProtKB/TrEMBL%3BAcc:B8BTI1];external_name=Thaps240;logic_name=jgi_thaps3 chr2 ensembl transcript 287461 288888 . + . ID=Thaps240;Parent=Thaps240;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 287461 287517 . + 0 ID=Thaps240;Parent=Thaps240;rank=1 chr2 . exon 287461 287517 . + . ID=Thaps240.1;Parent=Thaps240;constitutive=1;rank=1 chr2 . CDS 287636 288110 . + 0 ID=Thaps240;Parent=Thaps240;rank=2 chr2 . exon 287636 288110 . + . ID=Thaps240.2;Parent=Thaps240;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 288200 288888 . + 0 ID=Thaps240;Parent=Thaps240;rank=3 chr2 . exon 288200 288888 . + . ID=Thaps240.3;Parent=Thaps240;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 292798 297108 . + . ID=Thaps21133;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTI3];external_name=Thaps21133;logic_name=jgi_thaps3 chr2 ensembl transcript 292798 297108 . + . ID=Thaps21133;Parent=Thaps21133;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 292798 293374 . + 0 ID=Thaps21133;Parent=Thaps21133;rank=1 chr2 . exon 292798 293374 . + . ID=Thaps21133.1;Parent=Thaps21133;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 293471 295134 . + 0 ID=Thaps21133;Parent=Thaps21133;rank=2 chr2 . exon 293471 295134 . + . ID=Thaps21133.2;Parent=Thaps21133;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 295210 295350 . + 0 ID=Thaps21133;Parent=Thaps21133;rank=3 chr2 . exon 295210 295350 . + . ID=Thaps21133.3;Parent=Thaps21133;constitutive=1;rank=3 chr2 . CDS 295419 296006 . + 0 ID=Thaps21133;Parent=Thaps21133;rank=4 chr2 . exon 295419 296006 . + . ID=Thaps21133.4;Parent=Thaps21133;constitutive=1;rank=4 chr2 . CDS 296074 296262 . + 0 ID=Thaps21133;Parent=Thaps21133;rank=5 chr2 . exon 296074 296262 . + . ID=Thaps21133.5;Parent=Thaps21133;constitutive=1;rank=5 chr2 . CDS 296331 296576 . + 0 ID=Thaps21133;Parent=Thaps21133;rank=6 chr2 . exon 296331 296576 . + . ID=Thaps21133.6;Parent=Thaps21133;constitutive=1;rank=6 chr2 . CDS 296650 297108 . + 0 ID=Thaps21133;Parent=Thaps21133;rank=7 chr2 . exon 296650 297108 . + . ID=Thaps21133.7;Parent=Thaps21133;constitutive=1;rank=7 chr2 . exon 290014 290736 . - . ID=Thaps2145.3;Parent=Thaps2145;constitutive=1;rank=3 chr2 . exon 290959 291638 . - . ID=Thaps2145.2;Parent=Thaps2145;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . exon 291719 292278 . - . ID=Thaps2145.1;Parent=Thaps2145;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 297378 298556 . + . ID=Thaps2148;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTI4];external_name=Thaps2148;logic_name=jgi_thaps3 chr2 ensembl transcript 297378 298556 . + . ID=Thaps2148;Parent=Thaps2148;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 297378 298556 . + 0 ID=Thaps2148;Parent=Thaps2148;rank=1 chr2 . exon 297378 298556 . + . ID=Thaps2148.1;Parent=Thaps2148;constitutive=1;rank=1 chr2 . repeat_region 307292 307337 . ? . description=dust chr2 ensembl protein_coding_gene 304437 306377 . + . ID=Thaps21136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTI7];external_name=Thaps21136;logic_name=jgi_thaps3 chr2 ensembl transcript 304437 306377 . + . ID=Thaps21136;Parent=Thaps21136;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 304437 306377 . + 0 ID=Thaps21136;Parent=Thaps21136;rank=1 chr2 . exon 304437 306377 . + . ID=Thaps21136.1;Parent=Thaps21136;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 307907 308401 . + . ID=Thaps21137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTI9];external_name=Thaps21137;logic_name=jgi_thaps3 chr2 ensembl transcript 307907 308401 . + . ID=Thaps21137;Parent=Thaps21137;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 307907 308401 . + 0 ID=Thaps21137;Parent=Thaps21137;rank=1 chr2 . exon 307907 308401 . + . ID=Thaps21137.1;Parent=Thaps21137;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 303338 304183 . - . ID=Thaps2150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTI6];external_name=Thaps2150;logic_name=jgi_thaps3 chr2 ensembl transcript 303338 304183 . - . ID=Thaps2150;Parent=Thaps2150;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 303338 304183 . - 0 ID=Thaps2150;Parent=Thaps2150;rank=1 chr2 . exon 303338 304183 . - . ID=Thaps2150.1;Parent=Thaps2150;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 308554 309606 . - . ID=Thaps2154;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ0];external_name=Thaps2154;logic_name=jgi_thaps3 chr2 ensembl transcript 308554 309606 . - . ID=Thaps2154;Parent=Thaps2154;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 308554 309606 . - 0 ID=Thaps2154;Parent=Thaps2154;rank=1 chr2 . exon 308554 309606 . - . ID=Thaps2154.1;Parent=Thaps2154;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 299990 303218 . + . ID=Thaps261225;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTI5];external_name=Thaps261225;logic_name=jgi_thaps3 chr2 ensembl transcript 299990 303218 . + . ID=Thaps261225;Parent=Thaps261225;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 299990 300368 . + 0 ID=Thaps261225;Parent=Thaps261225;rank=1 chr2 . exon 299990 300368 . + . ID=Thaps261225.1;Parent=Thaps261225;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 300414 301588 . + 0 ID=Thaps261225;Parent=Thaps261225;rank=2 chr2 . exon 300414 301588 . + . ID=Thaps261225.2;Parent=Thaps261225;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 301668 302447 . + 0 ID=Thaps261225;Parent=Thaps261225;rank=3 chr2 . exon 301668 302447 . + . ID=Thaps261225.3;Parent=Thaps261225;constitutive=1;rank=3 chr2 . CDS 302541 303218 . + 0 ID=Thaps261225;Parent=Thaps261225;rank=4 chr2 . exon 302541 303218 . + . ID=Thaps261225.4;Parent=Thaps261225;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 306677 307490 . - . ID=Thaps261226;biotype=protein_coding;description=Thylakoid lumenal 17.4 kDa protein%2C chloroplast [Source:UniProtKB/TrEMBL%3BAcc:B8BTI8];external_name=Thaps261226;logic_name=jgi_thaps3 chr2 ensembl transcript 306677 307490 . - . ID=Thaps261226;Parent=Thaps261226;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 306677 306807 . - 0 ID=Thaps261226;Parent=Thaps261226;rank=2 chr2 . exon 306677 306807 . - . ID=Thaps261226.2;Parent=Thaps261226;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 306885 307490 . - 0 ID=Thaps261226;Parent=Thaps261226;rank=1 chr2 . exon 306885 307490 . - . ID=Thaps261226.1;Parent=Thaps261226;constitutive=1;rank=1 chr2 . repeat_region 313897 313964 . ? . description=trf chr2 . repeat_region 317929 318183 . ? . description=trf chr2 ensembl protein_coding_gene 310947 317030 . - . ID=Thaps21138;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ1];external_name=Thaps21138;logic_name=jgi_thaps3 chr2 ensembl transcript 310947 317030 . - . ID=Thaps21138;Parent=Thaps21138;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 310947 311155 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=16 chr2 . exon 310947 311155 . - . ID=Thaps21138.16;Parent=Thaps21138;constitutive=1;ensembl_end_phase=2;rank=16 chr2 . CDS 311235 311508 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=15 chr2 . exon 311235 311508 . - . ID=Thaps21138.15;Parent=Thaps21138;constitutive=1;ensembl_end_phase=1;rank=15 chr2 . CDS 311586 311902 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=14 chr2 . exon 311586 311902 . - . ID=Thaps21138.14;Parent=Thaps21138;constitutive=1;ensembl_end_phase=2;rank=14 chr2 . CDS 311990 312159 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=13 chr2 . exon 311990 312159 . - . ID=Thaps21138.13;Parent=Thaps21138;constitutive=1;ensembl_end_phase=2;rank=13 chr2 . CDS 312305 312321 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=12 chr2 . exon 312305 312321 . - . ID=Thaps21138.12;Parent=Thaps21138;constitutive=1;ensembl_end_phase=2;rank=12 chr2 . CDS 312397 312582 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=11 chr2 . exon 312397 312582 . - . ID=Thaps21138.11;Parent=Thaps21138;constitutive=1;rank=11 chr2 . CDS 312647 312670 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=10 chr2 . exon 312647 312670 . - . ID=Thaps21138.10;Parent=Thaps21138;constitutive=1;rank=10 chr2 . CDS 312733 312875 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=9 chr2 . exon 312733 312875 . - . ID=Thaps21138.9;Parent=Thaps21138;constitutive=1;ensembl_end_phase=2;rank=9 chr2 . CDS 312946 313055 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=8 chr2 . exon 312946 313055 . - . ID=Thaps21138.8;Parent=Thaps21138;constitutive=1;ensembl_end_phase=2;rank=8 chr2 . CDS 313140 313550 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=7 chr2 . exon 313140 313550 . - . ID=Thaps21138.7;Parent=Thaps21138;constitutive=1;rank=7 chr2 . CDS 313650 313674 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=6 chr2 . exon 313650 313674 . - . ID=Thaps21138.6;Parent=Thaps21138;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 313766 313868 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=5 chr2 . exon 313766 313868 . - . ID=Thaps21138.5;Parent=Thaps21138;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 313983 314122 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=4 chr2 . exon 313983 314122 . - . ID=Thaps21138.4;Parent=Thaps21138;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 314158 315139 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=3 chr2 . exon 314158 315139 . - . ID=Thaps21138.3;Parent=Thaps21138;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 315212 316788 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=2 chr2 . exon 315212 316788 . - . ID=Thaps21138.2;Parent=Thaps21138;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 316838 317030 . - 0 ID=Thaps21138;Parent=Thaps21138;rank=1 chr2 . exon 316838 317030 . - . ID=Thaps21138.1;Parent=Thaps21138;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 318667 319149 . - . ID=Thaps21139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ2];external_name=Thaps21139;logic_name=jgi_thaps3 chr2 ensembl transcript 318667 319149 . - . ID=Thaps21139;Parent=Thaps21139;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 318667 318969 . - 0 ID=Thaps21139;Parent=Thaps21139;rank=2 chr2 . exon 318667 318969 . - . ID=Thaps21139.2;Parent=Thaps21139;constitutive=1;rank=2 chr2 . CDS 319054 319149 . - 0 ID=Thaps21139;Parent=Thaps21139;rank=1 chr2 . exon 319054 319149 . - . ID=Thaps21139.1;Parent=Thaps21139;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 319234 320431 . - . ID=Thaps2157;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ3];external_name=Thaps2157;logic_name=jgi_thaps3 chr2 ensembl transcript 319234 320431 . - . ID=Thaps2157;Parent=Thaps2157;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 319234 319260 . - 0 ID=Thaps2157;Parent=Thaps2157;rank=3 chr2 . exon 319234 319260 . - . ID=Thaps2157.3;Parent=Thaps2157;constitutive=1;rank=3 chr2 . CDS 319304 319400 . - 0 ID=Thaps2157;Parent=Thaps2157;rank=2 chr2 . exon 319304 319400 . - . ID=Thaps2157.2;Parent=Thaps2157;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 319428 320431 . - 0 ID=Thaps2157;Parent=Thaps2157;rank=1 chr2 . exon 319428 320431 . - . ID=Thaps2157.1;Parent=Thaps2157;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 321796 322755 . - . ID=Thaps21140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ4];external_name=Thaps21140;logic_name=jgi_thaps3 chr2 ensembl transcript 321796 322755 . - . ID=Thaps21140;Parent=Thaps21140;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 321796 322755 . - 0 ID=Thaps21140;Parent=Thaps21140;rank=1 chr2 . exon 321796 322755 . - . ID=Thaps21140.1;Parent=Thaps21140;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 325829 326908 . + . ID=Thaps21141;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ7];external_name=Thaps21141;logic_name=jgi_thaps3 chr2 ensembl transcript 325829 326908 . + . ID=Thaps21141;Parent=Thaps21141;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 325829 326908 . + 0 ID=Thaps21141;Parent=Thaps21141;rank=1 chr2 . exon 325829 326908 . + . ID=Thaps21141.1;Parent=Thaps21141;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 323403 324146 . + . ID=Thaps2159;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ5];external_name=Thaps2159;logic_name=jgi_thaps3 chr2 ensembl transcript 323403 324146 . + . ID=Thaps2159;Parent=Thaps2159;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 323403 324146 . + 0 ID=Thaps2159;Parent=Thaps2159;rank=1 chr2 . exon 323403 324146 . + . ID=Thaps2159.1;Parent=Thaps2159;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 324376 325632 . - . ID=Thaps2160;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ6];external_name=Thaps2160;logic_name=jgi_thaps3 chr2 ensembl transcript 324376 325632 . - . ID=Thaps2160;Parent=Thaps2160;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 324376 324505 . - 0 ID=Thaps2160;Parent=Thaps2160;rank=6 chr2 . exon 324376 324505 . - . ID=Thaps2160.6;Parent=Thaps2160;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 324603 324641 . - 0 ID=Thaps2160;Parent=Thaps2160;rank=5 chr2 . exon 324603 324641 . - . ID=Thaps2160.5;Parent=Thaps2160;constitutive=1;rank=5 chr2 . CDS 324742 324780 . - 0 ID=Thaps2160;Parent=Thaps2160;rank=4 chr2 . exon 324742 324780 . - . ID=Thaps2160.4;Parent=Thaps2160;constitutive=1;rank=4 chr2 . CDS 324881 324915 . - 0 ID=Thaps2160;Parent=Thaps2160;rank=3 chr2 . exon 324881 324915 . - . ID=Thaps2160.3;Parent=Thaps2160;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 325004 325317 . - 0 ID=Thaps2160;Parent=Thaps2160;rank=2 chr2 . exon 325004 325317 . - . ID=Thaps2160.2;Parent=Thaps2160;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 325557 325632 . - 0 ID=Thaps2160;Parent=Thaps2160;rank=1 chr2 . exon 325557 325632 . - . ID=Thaps2160.1;Parent=Thaps2160;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 327376 330747 . - . ID=Thaps26941;biotype=protein_coding;description=NADPH nitrite reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ8];external_name=NIR_1;logic_name=jgi_thaps3 chr2 ensembl transcript 327376 330747 . - . ID=Thaps26941;Parent=Thaps26941;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 327376 328622 . - 0 ID=Thaps26941;Parent=Thaps26941;rank=5 chr2 . exon 327376 328622 . - . ID=Thaps26941.5;Parent=Thaps26941;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 328704 328848 . - 0 ID=Thaps26941;Parent=Thaps26941;rank=4 chr2 . exon 328704 328848 . - . ID=Thaps26941.4;Parent=Thaps26941;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 328924 329552 . - 0 ID=Thaps26941;Parent=Thaps26941;rank=3 chr2 . exon 328924 329552 . - . ID=Thaps26941.3;Parent=Thaps26941;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 329644 330268 . - 0 ID=Thaps26941;Parent=Thaps26941;rank=2 chr2 . exon 329644 330268 . - . ID=Thaps26941.2;Parent=Thaps26941;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 330373 330747 . - 0 ID=Thaps26941;Parent=Thaps26941;rank=1 chr2 . repeat_region 339002 339010 . ? . description=dust chr2 ensembl protein_coding_gene 331323 333335 . + . ID=Thaps21143;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTJ9];external_name=Thaps21143;logic_name=jgi_thaps3 chr2 ensembl transcript 331323 333335 . + . ID=Thaps21143;Parent=Thaps21143;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 331323 331436 . + 0 ID=Thaps21143;Parent=Thaps21143;rank=1 chr2 . exon 331323 331436 . + . ID=Thaps21143.1;Parent=Thaps21143;constitutive=1;rank=1 chr2 . CDS 331812 333335 . + 0 ID=Thaps21143;Parent=Thaps21143;rank=2 chr2 . exon 331812 333335 . + . ID=Thaps21143.2;Parent=Thaps21143;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 336709 337886 . + . ID=Thaps21145;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTK2];external_name=Thaps21145;logic_name=jgi_thaps3 chr2 ensembl transcript 336709 337886 . + . ID=Thaps21145;Parent=Thaps21145;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 336709 336859 . + 0 ID=Thaps21145;Parent=Thaps21145;rank=1 chr2 . exon 336709 336859 . + . ID=Thaps21145.1;Parent=Thaps21145;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 337036 337886 . + 0 ID=Thaps21145;Parent=Thaps21145;rank=2 chr2 . exon 337036 337886 . + . ID=Thaps21145.2;Parent=Thaps21145;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 335951 336415 . - . ID=Thaps261228;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTK1];external_name=Thaps261228;logic_name=jgi_thaps3 chr2 ensembl transcript 335951 336415 . - . ID=Thaps261228;Parent=Thaps261228;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 335951 335995 . - 0 ID=Thaps261228;Parent=Thaps261228;rank=3 chr2 . exon 335951 335995 . - . ID=Thaps261228.3;Parent=Thaps261228;constitutive=1;rank=3 chr2 . CDS 336098 336255 . - 0 ID=Thaps261228;Parent=Thaps261228;rank=2 chr2 . exon 336098 336255 . - . ID=Thaps261228.2;Parent=Thaps261228;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 336346 336415 . - 0 ID=Thaps261228;Parent=Thaps261228;rank=1 chr2 . exon 336346 336415 . - . ID=Thaps261228.1;Parent=Thaps261228;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 330373 330747 . - . ID=Thaps26941.1;Parent=Thaps26941;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 338062 339241 . - . ID=Thaps31851;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTK3];external_name=Thaps31851;logic_name=jgi_thaps3 chr2 ensembl transcript 338062 339241 . - . ID=Thaps31851;Parent=Thaps31851;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 338062 338211 . - 0 ID=Thaps31851;Parent=Thaps31851;rank=3 chr2 . exon 338062 338211 . - . ID=Thaps31851.3;Parent=Thaps31851;constitutive=1;rank=3 chr2 . CDS 338337 338749 . - 0 ID=Thaps31851;Parent=Thaps31851;rank=2 chr2 . exon 338337 338749 . - . ID=Thaps31851.2;Parent=Thaps31851;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 339049 339241 . - 0 ID=Thaps31851;Parent=Thaps31851;rank=1 chr2 . exon 339049 339241 . - . ID=Thaps31851.1;Parent=Thaps31851;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 334023 335679 . + . ID=Thaps32414;biotype=protein_coding;description=GTP-binding protein engA [Source:UniProtKB/TrEMBL%3BAcc:B8BTK0];external_name=Thaps32414;logic_name=jgi_thaps3 chr2 ensembl transcript 334023 335679 . + . ID=Thaps32414;Parent=Thaps32414;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 334023 334526 . + 0 ID=Thaps32414;Parent=Thaps32414;rank=1 chr2 . exon 334023 334526 . + . ID=Thaps32414.1;Parent=Thaps32414;constitutive=1;rank=1 chr2 . CDS 334614 334646 . + 0 ID=Thaps32414;Parent=Thaps32414;rank=2 chr2 . exon 334614 334646 . + . ID=Thaps32414.2;Parent=Thaps32414;constitutive=1;rank=2 chr2 . CDS 334837 335679 . + 0 ID=Thaps32414;Parent=Thaps32414;rank=3 chr2 . exon 334837 335679 . + . ID=Thaps32414.3;Parent=Thaps32414;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 342326 343291 . - . ID=Thaps21147;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTK5];external_name=Thaps21147;logic_name=jgi_thaps3 chr2 ensembl transcript 342326 343291 . - . ID=Thaps21147;Parent=Thaps21147;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 342326 343291 . - 0 ID=Thaps21147;Parent=Thaps21147;rank=1 chr2 . exon 342326 343291 . - . ID=Thaps21147.1;Parent=Thaps21147;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 344923 345551 . - . ID=Thaps2170;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTK7];external_name=Thaps2170;logic_name=jgi_thaps3 chr2 ensembl transcript 344923 345551 . - . ID=Thaps2170;Parent=Thaps2170;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 344923 345136 . - 0 ID=Thaps2170;Parent=Thaps2170;rank=2 chr2 . exon 344923 345136 . - . ID=Thaps2170.2;Parent=Thaps2170;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 345388 345551 . - 0 ID=Thaps2170;Parent=Thaps2170;rank=1 chr2 . exon 345388 345551 . - . ID=Thaps2170.1;Parent=Thaps2170;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 345865 346889 . + . ID=Thaps2171;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTK8];external_name=Thaps2171;logic_name=jgi_thaps3 chr2 ensembl transcript 345865 346889 . + . ID=Thaps2171;Parent=Thaps2171;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 345865 346028 . + 0 ID=Thaps2171;Parent=Thaps2171;rank=1 chr2 . exon 345865 346028 . + . ID=Thaps2171.1;Parent=Thaps2171;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 346169 346889 . + 0 ID=Thaps2171;Parent=Thaps2171;rank=2 chr2 . exon 346169 346889 . + . ID=Thaps2171.2;Parent=Thaps2171;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 347327 348844 . + . ID=Thaps261232;biotype=protein_coding;description=Uroporphyrinogen decarboxylase [Source:UniProtKB/TrEMBL%3BAcc:B8BTK9];external_name=Thaps261232;logic_name=jgi_thaps3 chr2 ensembl transcript 347327 348844 . + . ID=Thaps261232;Parent=Thaps261232;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 347327 347755 . + 0 ID=Thaps261232;Parent=Thaps261232;rank=1 chr2 . exon 347327 347755 . + . ID=Thaps261232.1;Parent=Thaps261232;constitutive=1;rank=1 chr2 . CDS 347929 348294 . + 0 ID=Thaps261232;Parent=Thaps261232;rank=2 chr2 . exon 347929 348294 . + . ID=Thaps261232.2;Parent=Thaps261232;constitutive=1;rank=2 chr2 . CDS 348463 348613 . + 0 ID=Thaps261232;Parent=Thaps261232;rank=3 chr2 . exon 348463 348613 . + . ID=Thaps261232.3;Parent=Thaps261232;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 348641 348844 . + 0 ID=Thaps261232;Parent=Thaps261232;rank=4 chr2 . exon 348641 348844 . + . ID=Thaps261232.4;Parent=Thaps261232;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 343782 344588 . + . ID=Thaps268179;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTK6];external_name=Thaps268179;logic_name=jgi_thaps3 chr2 ensembl transcript 343782 344588 . + . ID=Thaps268179;Parent=Thaps268179;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 343782 344588 . + 0 ID=Thaps268179;Parent=Thaps268179;rank=1 chr2 . exon 343782 344588 . + . ID=Thaps268179.1;Parent=Thaps268179;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 340862 341819 . + . ID=Thaps32176;biotype=protein_coding;description=Microtubule-associated protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTK4];external_name=Thaps32176;logic_name=jgi_thaps3 chr2 ensembl transcript 340862 341819 . + . ID=Thaps32176;Parent=Thaps32176;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 340862 340895 . + 0 ID=Thaps32176;Parent=Thaps32176;rank=1 chr2 . exon 340862 340895 . + . ID=Thaps32176.1;Parent=Thaps32176;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 341342 341569 . + 0 ID=Thaps32176;Parent=Thaps32176;rank=2 chr2 . exon 341342 341569 . + . ID=Thaps32176.2;Parent=Thaps32176;constitutive=1;rank=2 chr2 . CDS 341704 341819 . + 0 ID=Thaps32176;Parent=Thaps32176;rank=3 chr2 . exon 341704 341819 . + . ID=Thaps32176.3;Parent=Thaps32176;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . repeat_region 351638 351732 . + . description=Harbinger2N_TP chr2 . repeat_region 351640 351707 . ? . description=trf chr2 . repeat_region 351640 351732 . ? . description=dust chr2 . repeat_region 351706 351732 . ? . description=trf chr2 . repeat_region 352673 352680 . ? . description=dust chr2 . repeat_region 357243 357318 . - . description=Harbinger2N_TP chr2 . repeat_region 357256 357275 . ? . description=trf chr2 . repeat_region 357292 357308 . ? . description=dust chr2 ensembl protein_coding_gene 352335 353735 . + . ID=Thaps21149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTL1];external_name=Thaps21149;logic_name=jgi_thaps3 chr2 ensembl transcript 352335 353735 . + . ID=Thaps21149;Parent=Thaps21149;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 352335 353735 . + 0 ID=Thaps21149;Parent=Thaps21149;rank=1 chr2 . exon 352335 353735 . + . ID=Thaps21149.1;Parent=Thaps21149;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 357690 359048 . + . ID=Thaps21152;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTL4];external_name=Thaps21152;logic_name=jgi_thaps3 chr2 ensembl transcript 357690 359048 . + . ID=Thaps21152;Parent=Thaps21152;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 357690 359048 . + 0 ID=Thaps21152;Parent=Thaps21152;rank=1 chr2 . exon 357690 359048 . + . ID=Thaps21152.1;Parent=Thaps21152;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 350505 351560 . - . ID=Thaps2173;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTL0];external_name=Thaps2173;logic_name=jgi_thaps3 chr2 ensembl transcript 350505 351560 . - . ID=Thaps2173;Parent=Thaps2173;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 350505 351560 . - 0 ID=Thaps2173;Parent=Thaps2173;rank=1 chr2 . exon 350505 351560 . - . ID=Thaps2173.1;Parent=Thaps2173;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 354128 355270 . - . ID=Thaps261233;biotype=protein_coding;description=Pyruvate dehydrogenase kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BTL2];external_name=PDK1_1;logic_name=jgi_thaps3 chr2 ensembl transcript 354128 355270 . - . ID=Thaps261233;Parent=Thaps261233;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 354128 354263 . - 0 ID=Thaps261233;Parent=Thaps261233;rank=5 chr2 . exon 354128 354263 . - . ID=Thaps261233.5;Parent=Thaps261233;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 354306 354513 . - 0 ID=Thaps261233;Parent=Thaps261233;rank=4 chr2 . exon 354306 354513 . - . ID=Thaps261233.4;Parent=Thaps261233;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 354565 354751 . - 0 ID=Thaps261233;Parent=Thaps261233;rank=3 chr2 . exon 354565 354751 . - . ID=Thaps261233.3;Parent=Thaps261233;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 354819 354834 . - 0 ID=Thaps261233;Parent=Thaps261233;rank=2 chr2 . exon 354819 354834 . - . ID=Thaps261233.2;Parent=Thaps261233;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 354858 355270 . - 0 ID=Thaps261233;Parent=Thaps261233;rank=1 chr2 . exon 354858 355270 . - . ID=Thaps261233.1;Parent=Thaps261233;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 356159 356821 . - . ID=Thaps32137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTL3];external_name=Thaps32137;logic_name=jgi_thaps3 chr2 ensembl transcript 356159 356821 . - . ID=Thaps32137;Parent=Thaps32137;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 356159 356821 . - 0 ID=Thaps32137;Parent=Thaps32137;rank=1 chr2 . exon 356159 356821 . - . ID=Thaps32137.1;Parent=Thaps32137;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 369411 370166 . - . ID=Thaps21155;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTL8];external_name=Thaps21155;logic_name=jgi_thaps3 chr2 ensembl transcript 369411 370166 . - . ID=Thaps21155;Parent=Thaps21155;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 369411 370166 . - 0 ID=Thaps21155;Parent=Thaps21155;rank=1 chr2 . exon 369411 370166 . - . ID=Thaps21155.1;Parent=Thaps21155;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 359740 365616 . - . ID=Thaps2178;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTL5];external_name=Thaps2178;logic_name=jgi_thaps3 chr2 ensembl transcript 359740 365616 . - . ID=Thaps2178;Parent=Thaps2178;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 359740 365616 . - 0 ID=Thaps2178;Parent=Thaps2178;rank=1 chr2 . exon 359740 365616 . - . ID=Thaps2178.1;Parent=Thaps2178;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 367343 369100 . + . ID=Thaps268185;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTL7];external_name=Thaps268185;logic_name=jgi_thaps3 chr2 ensembl transcript 367343 369100 . + . ID=Thaps268185;Parent=Thaps268185;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 367343 369100 . + 0 ID=Thaps268185;Parent=Thaps268185;rank=1 chr2 . exon 367343 369100 . + . ID=Thaps268185.1;Parent=Thaps268185;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 365865 366824 . - . ID=Thaps31846;biotype=protein_coding;description=Member of the inositol monophosphatase protein family [Source:UniProtKB/TrEMBL%3BAcc:B8BTL6];external_name=Thaps31846;logic_name=jgi_thaps3 chr2 ensembl transcript 365865 366824 . - . ID=Thaps31846;Parent=Thaps31846;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 365865 366407 . - 0 ID=Thaps31846;Parent=Thaps31846;rank=2 chr2 . exon 365865 366407 . - . ID=Thaps31846.2;Parent=Thaps31846;constitutive=1;rank=2 chr2 . CDS 366546 366824 . - 0 ID=Thaps31846;Parent=Thaps31846;rank=1 chr2 . exon 366546 366824 . - . ID=Thaps31846.1;Parent=Thaps31846;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 370546 375376 . + . ID=Thaps2182;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTL9];external_name=Thaps2182;logic_name=jgi_thaps3 chr2 ensembl transcript 370546 375376 . + . ID=Thaps2182;Parent=Thaps2182;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 370546 370680 . + 0 ID=Thaps2182;Parent=Thaps2182;rank=1 chr2 . exon 370546 370680 . + . ID=Thaps2182.1;Parent=Thaps2182;constitutive=1;rank=1 chr2 . CDS 370805 373941 . + 0 ID=Thaps2182;Parent=Thaps2182;rank=2 chr2 . exon 370805 373941 . + . ID=Thaps2182.2;Parent=Thaps2182;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 374028 374866 . + 0 ID=Thaps2182;Parent=Thaps2182;rank=3 chr2 . exon 374028 374866 . + . ID=Thaps2182.3;Parent=Thaps2182;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 374934 375376 . + 0 ID=Thaps2182;Parent=Thaps2182;rank=4 chr2 . exon 374934 375376 . + . ID=Thaps2182.4;Parent=Thaps2182;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 378123 379011 . + . ID=Thaps2184;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTM1];external_name=Thaps2184;logic_name=jgi_thaps3 chr2 ensembl transcript 378123 379011 . + . ID=Thaps2184;Parent=Thaps2184;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 378123 378275 . + 0 ID=Thaps2184;Parent=Thaps2184;rank=1 chr2 . exon 378123 378275 . + . ID=Thaps2184.1;Parent=Thaps2184;constitutive=1;rank=1 chr2 . CDS 378385 379011 . + 0 ID=Thaps2184;Parent=Thaps2184;rank=2 chr2 . exon 378385 379011 . + . ID=Thaps2184.2;Parent=Thaps2184;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 375505 377621 . - . ID=Thaps26957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTM0];external_name=Thaps26957;logic_name=jgi_thaps3 chr2 ensembl transcript 375505 377621 . - . ID=Thaps26957;Parent=Thaps26957;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 375505 377360 . - 0 ID=Thaps26957;Parent=Thaps26957;rank=2 chr2 . exon 375505 377360 . - . ID=Thaps26957.2;Parent=Thaps26957;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 377552 377621 . - 0 ID=Thaps26957;Parent=Thaps26957;rank=1 chr2 . exon 377552 377621 . - . ID=Thaps26957.1;Parent=Thaps26957;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 380426 380433 . ? . description=dust chr2 . repeat_region 387446 387453 . ? . description=dust chr2 ensembl protein_coding_gene 385116 387238 . - . ID=Thaps21157;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTM5];external_name=Thaps21157;logic_name=jgi_thaps3 chr2 ensembl transcript 385116 387238 . - . ID=Thaps21157;Parent=Thaps21157;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 385116 385750 . - 0 ID=Thaps21157;Parent=Thaps21157;rank=2 chr2 . exon 385116 385750 . - . ID=Thaps21157.2;Parent=Thaps21157;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 385828 387238 . - 0 ID=Thaps21157;Parent=Thaps21157;rank=1 chr2 . exon 385828 387238 . - . ID=Thaps21157.1;Parent=Thaps21157;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 387807 395857 . + . ID=Thaps21158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTM6];external_name=Thaps21158;logic_name=jgi_thaps3 chr2 ensembl transcript 387807 395857 . + . ID=Thaps21158;Parent=Thaps21158;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 387807 388197 . + 0 ID=Thaps21158;Parent=Thaps21158;rank=1 chr2 . exon 387807 388197 . + . ID=Thaps21158.1;Parent=Thaps21158;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 388399 391887 . + 0 ID=Thaps21158;Parent=Thaps21158;rank=2 chr2 . exon 388399 391887 . + . ID=Thaps21158.2;Parent=Thaps21158;constitutive=1;rank=2 chr2 . CDS 391968 393707 . + 0 ID=Thaps21158;Parent=Thaps21158;rank=3 chr2 . CDS 393805 395487 . + 0 ID=Thaps21158;Parent=Thaps21158;rank=4 chr2 . CDS 395565 395857 . + 0 ID=Thaps21158;Parent=Thaps21158;rank=5 chr2 ensembl protein_coding_gene 383657 385039 . + . ID=Thaps2186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTM4];external_name=Thaps2186;logic_name=jgi_thaps3 chr2 ensembl transcript 383657 385039 . + . ID=Thaps2186;Parent=Thaps2186;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 383657 385039 . + 0 ID=Thaps2186;Parent=Thaps2186;rank=1 chr2 . exon 383657 385039 . + . ID=Thaps2186.1;Parent=Thaps2186;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 380188 380394 . + . ID=Thaps261242;biotype=protein_coding;description=PSBP%2C photosystem II oxygen-evolving complex 23K protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTM2];external_name=PSBP;logic_name=jgi_thaps3 chr2 ensembl transcript 380188 380394 . + . ID=Thaps261242;Parent=Thaps261242;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 380188 380394 . + 0 ID=Thaps261242;Parent=Thaps261242;rank=1 chr2 . exon 380188 380394 . + . ID=Thaps261242.1;Parent=Thaps261242;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 381450 381861 . - . ID=Thaps268187;biotype=protein_coding;description=Putative uncharacterized protein ycf19_1 [Source:UniProtKB/TrEMBL%3BAcc:B8BTM3];external_name=YCF19_1;logic_name=jgi_thaps3 chr2 ensembl transcript 381450 381861 . - . ID=Thaps268187;Parent=Thaps268187;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 381450 381680 . - 0 ID=Thaps268187;Parent=Thaps268187;rank=2 chr2 . exon 381450 381680 . - . ID=Thaps268187.2;Parent=Thaps268187;constitutive=1;rank=2 chr2 . CDS 381778 381861 . - 0 ID=Thaps268187;Parent=Thaps268187;rank=1 chr2 . exon 381778 381861 . - . ID=Thaps268187.1;Parent=Thaps268187;constitutive=1;rank=1 chr2 . repeat_region 393766 393801 . ? . description=trf chr2 . repeat_region 399341 399368 . ? . description=trf chr2 . repeat_region 399345 399371 . ? . description=trf chr2 . exon 391968 393707 . + . ID=Thaps21158.3;Parent=Thaps21158;constitutive=1;rank=3 chr2 . exon 393805 395487 . + . ID=Thaps21158.4;Parent=Thaps21158;constitutive=1;rank=4 chr2 . exon 395565 395857 . + . ID=Thaps21158.5;Parent=Thaps21158;constitutive=1;ensembl_end_phase=2;rank=5 chr2 ensembl protein_coding_gene 396642 397999 . + . ID=Thaps21159;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTM7];external_name=Thaps21159;logic_name=jgi_thaps3 chr2 ensembl transcript 396642 397999 . + . ID=Thaps21159;Parent=Thaps21159;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 396642 396728 . + 0 ID=Thaps21159;Parent=Thaps21159;rank=1 chr2 . exon 396642 396728 . + . ID=Thaps21159.1;Parent=Thaps21159;constitutive=1;rank=1 chr2 . CDS 396888 396956 . + 0 ID=Thaps21159;Parent=Thaps21159;rank=2 chr2 . exon 396888 396956 . + . ID=Thaps21159.2;Parent=Thaps21159;constitutive=1;rank=2 chr2 . CDS 397071 397358 . + 0 ID=Thaps21159;Parent=Thaps21159;rank=3 chr2 . exon 397071 397358 . + . ID=Thaps21159.3;Parent=Thaps21159;constitutive=1;rank=3 chr2 . CDS 397475 397999 . + 0 ID=Thaps21159;Parent=Thaps21159;rank=4 chr2 . exon 397475 397999 . + . ID=Thaps21159.4;Parent=Thaps21159;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 398339 398863 . - . ID=Thaps2190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTM8];external_name=Thaps2190;logic_name=jgi_thaps3 chr2 ensembl transcript 398339 398863 . - . ID=Thaps2190;Parent=Thaps2190;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 398339 398863 . - 0 ID=Thaps2190;Parent=Thaps2190;rank=1 chr2 . exon 398339 398863 . - . ID=Thaps2190.1;Parent=Thaps2190;constitutive=1;rank=1 chr2 . repeat_region 403816 403849 . ? . description=dust chr2 ensembl protein_coding_gene 403404 407103 . + . ID=Thaps21161;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTM9];external_name=Thaps21161;logic_name=jgi_thaps3 chr2 ensembl transcript 403404 407103 . + . ID=Thaps21161;Parent=Thaps21161;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 403404 403724 . + 0 ID=Thaps21161;Parent=Thaps21161;rank=1 chr2 . exon 403404 403724 . + . ID=Thaps21161.1;Parent=Thaps21161;constitutive=1;rank=1 chr2 . CDS 403884 404543 . + 0 ID=Thaps21161;Parent=Thaps21161;rank=2 chr2 . exon 403884 404543 . + . ID=Thaps21161.2;Parent=Thaps21161;constitutive=1;rank=2 chr2 . CDS 404643 405175 . + 0 ID=Thaps21161;Parent=Thaps21161;rank=3 chr2 . exon 404643 405175 . + . ID=Thaps21161.3;Parent=Thaps21161;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 405261 407103 . + 0 ID=Thaps21161;Parent=Thaps21161;rank=4 chr2 . exon 405261 407103 . + . ID=Thaps21161.4;Parent=Thaps21161;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 407670 409512 . + . ID=Thaps31762;biotype=protein_coding;description=Carnitine acetyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BTN0];external_name=CAT2;logic_name=jgi_thaps3 chr2 ensembl transcript 407670 409512 . + . ID=Thaps31762;Parent=Thaps31762;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 407670 408756 . + 0 ID=Thaps31762;Parent=Thaps31762;rank=1 chr2 . exon 407670 408756 . + . ID=Thaps31762.1;Parent=Thaps31762;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 408878 409512 . + 0 ID=Thaps31762;Parent=Thaps31762;rank=2 chr2 . exon 408878 409512 . + . ID=Thaps31762.2;Parent=Thaps31762;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 413251 413288 . ? . description=trf chr2 ensembl protein_coding_gene 411451 413661 . - . ID=Thaps21163;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTN2];external_name=Thaps21163;logic_name=jgi_thaps3 chr2 ensembl transcript 411451 413661 . - . ID=Thaps21163;Parent=Thaps21163;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 411451 413661 . - 0 ID=Thaps21163;Parent=Thaps21163;rank=1 chr2 . exon 411451 413661 . - . ID=Thaps21163.1;Parent=Thaps21163;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 409789 411150 . - . ID=Thaps2194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTN1];external_name=Thaps2194;logic_name=jgi_thaps3 chr2 ensembl transcript 409789 411150 . - . ID=Thaps2194;Parent=Thaps2194;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 409789 411150 . - 0 ID=Thaps2194;Parent=Thaps2194;rank=1 chr2 . exon 409789 411150 . - . ID=Thaps2194.1;Parent=Thaps2194;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 414752 415532 . + . ID=Thaps261250;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTN3];external_name=Thaps261250;logic_name=jgi_thaps3 chr2 ensembl transcript 414752 415532 . + . ID=Thaps261250;Parent=Thaps261250;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 414752 415121 . + 0 ID=Thaps261250;Parent=Thaps261250;rank=1 chr2 . exon 414752 415121 . + . ID=Thaps261250.1;Parent=Thaps261250;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 415260 415532 . + 0 ID=Thaps261250;Parent=Thaps261250;rank=2 chr2 . exon 415260 415532 . + . ID=Thaps261250.2;Parent=Thaps261250;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 418277 418498 . - . ID=Thaps31881;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTN4];external_name=Thaps31881;logic_name=jgi_thaps3 chr2 ensembl transcript 418277 418498 . - . ID=Thaps31881;Parent=Thaps31881;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 418277 418498 . - 0 ID=Thaps31881;Parent=Thaps31881;rank=1 chr2 . exon 418277 418498 . - . ID=Thaps31881.1;Parent=Thaps31881;constitutive=1;rank=1 chr2 . repeat_region 421887 421906 . ? . description=dust chr2 ensembl protein_coding_gene 428543 428857 . - . ID=Thaps18820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTP0];external_name=Thaps18820;logic_name=jgi_thaps3 chr2 ensembl transcript 428543 428857 . - . ID=Thaps18820;Parent=Thaps18820;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 428543 428857 . - 0 ID=Thaps18820;Parent=Thaps18820;rank=1 chr2 . exon 428543 428857 . - . ID=Thaps18820.1;Parent=Thaps18820;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 421121 422734 . - . ID=Thaps21165;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTN6];external_name=Thaps21165;logic_name=jgi_thaps3 chr2 ensembl transcript 421121 422734 . - . ID=Thaps21165;Parent=Thaps21165;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 421121 422734 . - 0 ID=Thaps21165;Parent=Thaps21165;rank=1 chr2 . exon 421121 422734 . - . ID=Thaps21165.1;Parent=Thaps21165;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 423142 423903 . + . ID=Thaps2200;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTN7];external_name=Thaps2200;logic_name=jgi_thaps3 chr2 ensembl transcript 423142 423903 . + . ID=Thaps2200;Parent=Thaps2200;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 423142 423903 . + 0 ID=Thaps2200;Parent=Thaps2200;rank=1 chr2 . exon 423142 423903 . + . ID=Thaps2200.1;Parent=Thaps2200;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 420040 420417 . + . ID=Thaps261251;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTN5];external_name=Thaps261251;logic_name=jgi_thaps3 chr2 ensembl transcript 420040 420417 . + . ID=Thaps261251;Parent=Thaps261251;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 420040 420417 . + 0 ID=Thaps261251;Parent=Thaps261251;rank=1 chr2 . exon 420040 420417 . + . ID=Thaps261251.1;Parent=Thaps261251;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 426582 427857 . + . ID=Thaps268192;biotype=protein_coding;description=Heavy metal transporter putative zinc transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BTN9];external_name=Thaps268192;logic_name=jgi_thaps3 chr2 ensembl transcript 426582 427857 . + . ID=Thaps268192;Parent=Thaps268192;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 426582 426890 . + 0 ID=Thaps268192;Parent=Thaps268192;rank=1 chr2 . exon 426582 426890 . + . ID=Thaps268192.1;Parent=Thaps268192;constitutive=1;rank=1 chr2 . CDS 427051 427089 . + 0 ID=Thaps268192;Parent=Thaps268192;rank=2 chr2 . exon 427051 427089 . + . ID=Thaps268192.2;Parent=Thaps268192;constitutive=1;rank=2 chr2 . CDS 427384 427857 . + 0 ID=Thaps268192;Parent=Thaps268192;rank=3 chr2 . exon 427384 427857 . + . ID=Thaps268192.3;Parent=Thaps268192;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 423963 426068 . - . ID=Thaps32092;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTN8];external_name=Thaps32092;logic_name=jgi_thaps3 chr2 ensembl transcript 423963 426068 . - . ID=Thaps32092;Parent=Thaps32092;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 423963 426068 . - 0 ID=Thaps32092;Parent=Thaps32092;rank=1 chr2 . exon 423963 426068 . - . ID=Thaps32092.1;Parent=Thaps32092;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 434571 436109 . - . ID=Thaps21168;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTP4];external_name=Thaps21168;logic_name=jgi_thaps3 chr2 ensembl transcript 434571 436109 . - . ID=Thaps21168;Parent=Thaps21168;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 434571 436109 . - 0 ID=Thaps21168;Parent=Thaps21168;rank=1 chr2 . exon 434571 436109 . - . ID=Thaps21168.1;Parent=Thaps21168;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 433865 434467 . + . ID=Thaps2206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTP3];external_name=Thaps2206;logic_name=jgi_thaps3 chr2 ensembl transcript 433865 434467 . + . ID=Thaps2206;Parent=Thaps2206;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 433865 434467 . + 0 ID=Thaps2206;Parent=Thaps2206;rank=1 chr2 . exon 433865 434467 . + . ID=Thaps2206.1;Parent=Thaps2206;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 438390 439411 . - . ID=Thaps261255;biotype=protein_coding;description=Guanyl nucleotide exchange factor [Source:UniProtKB/TrEMBL%3BAcc:B8BTP5];external_name=Thaps261255;logic_name=jgi_thaps3 chr2 ensembl transcript 438390 439411 . - . ID=Thaps261255;Parent=Thaps261255;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 438390 438735 . - 0 ID=Thaps261255;Parent=Thaps261255;rank=2 chr2 . exon 438390 438735 . - . ID=Thaps261255.2;Parent=Thaps261255;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 438828 439411 . - 0 ID=Thaps261255;Parent=Thaps261255;rank=1 chr2 . exon 438828 439411 . - . ID=Thaps261255.1;Parent=Thaps261255;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 432339 433598 . - . ID=Thaps268194;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTP2];external_name=MYB9;logic_name=jgi_thaps3 chr2 ensembl transcript 432339 433598 . - . ID=Thaps268194;Parent=Thaps268194;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 432339 432997 . - 0 ID=Thaps268194;Parent=Thaps268194;rank=2 chr2 . exon 432339 432997 . - . ID=Thaps268194.2;Parent=Thaps268194;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 433094 433598 . - 0 ID=Thaps268194;Parent=Thaps268194;rank=1 chr2 . exon 433094 433598 . - . ID=Thaps268194.1;Parent=Thaps268194;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 430621 431896 . + . ID=Thaps32375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTP1];external_name=Thaps32375;logic_name=jgi_thaps3 chr2 ensembl transcript 430621 431896 . + . ID=Thaps32375;Parent=Thaps32375;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 430621 430894 . + 0 ID=Thaps32375;Parent=Thaps32375;rank=1 chr2 . exon 430621 430894 . + . ID=Thaps32375.1;Parent=Thaps32375;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 431367 431896 . + 0 ID=Thaps32375;Parent=Thaps32375;rank=2 chr2 . exon 431367 431896 . + . ID=Thaps32375.2;Parent=Thaps32375;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 444168 444650 . + . ID=Thaps2209;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTP6];external_name=Thaps2209;logic_name=jgi_thaps3 chr2 ensembl transcript 444168 444650 . + . ID=Thaps2209;Parent=Thaps2209;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 444168 444650 . + 0 ID=Thaps2209;Parent=Thaps2209;rank=1 chr2 . exon 444168 444650 . + . ID=Thaps2209.1;Parent=Thaps2209;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 448352 449509 . - . ID=Thaps2211;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTP8];external_name=Thaps2211;logic_name=jgi_thaps3 chr2 ensembl transcript 448352 449509 . - . ID=Thaps2211;Parent=Thaps2211;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 448352 448784 . - 0 ID=Thaps2211;Parent=Thaps2211;rank=3 chr2 . exon 448352 448784 . - . ID=Thaps2211.3;Parent=Thaps2211;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 448891 449006 . - 0 ID=Thaps2211;Parent=Thaps2211;rank=2 chr2 . exon 448891 449006 . - . ID=Thaps2211.2;Parent=Thaps2211;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 449138 449509 . - 0 ID=Thaps2211;Parent=Thaps2211;rank=1 chr2 . exon 449138 449509 . - . ID=Thaps2211.1;Parent=Thaps2211;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 446210 447843 . + . ID=Thaps32325;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTP7];external_name=Thaps32325;logic_name=jgi_thaps3 chr2 ensembl transcript 446210 447843 . + . ID=Thaps32325;Parent=Thaps32325;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 446210 446922 . + 0 ID=Thaps32325;Parent=Thaps32325;rank=1 chr2 . exon 446210 446922 . + . ID=Thaps32325.1;Parent=Thaps32325;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 446977 447537 . + 0 ID=Thaps32325;Parent=Thaps32325;rank=2 chr2 . exon 446977 447537 . + . ID=Thaps32325.2;Parent=Thaps32325;constitutive=1;rank=2 chr2 . CDS 447621 447843 . + 0 ID=Thaps32325;Parent=Thaps32325;rank=3 chr2 . exon 447621 447843 . + . ID=Thaps32325.3;Parent=Thaps32325;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . repeat_region 451573 451586 . ? . description=dust chr2 ensembl protein_coding_gene 449925 451427 . - . ID=Thaps21170;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTP9];external_name=Thaps21170;logic_name=jgi_thaps3 chr2 ensembl transcript 449925 451427 . - . ID=Thaps21170;Parent=Thaps21170;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 449925 450377 . - 0 ID=Thaps21170;Parent=Thaps21170;rank=4 chr2 . exon 449925 450377 . - . ID=Thaps21170.4;Parent=Thaps21170;constitutive=1;rank=4 chr2 . CDS 450471 450691 . - 0 ID=Thaps21170;Parent=Thaps21170;rank=3 chr2 . exon 450471 450691 . - . ID=Thaps21170.3;Parent=Thaps21170;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 450788 451207 . - 0 ID=Thaps21170;Parent=Thaps21170;rank=2 chr2 . exon 450788 451207 . - . ID=Thaps21170.2;Parent=Thaps21170;constitutive=1;rank=2 chr2 . CDS 451352 451427 . - 0 ID=Thaps21170;Parent=Thaps21170;rank=1 chr2 . exon 451352 451427 . - . ID=Thaps21170.1;Parent=Thaps21170;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 454286 455033 . - . ID=Thaps261258;biotype=protein_coding;description=Putative uncharacterized protein ZFP7 [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ1];external_name=ZFP7;logic_name=jgi_thaps3 chr2 ensembl transcript 454286 455033 . - . ID=Thaps261258;Parent=Thaps261258;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 454286 455033 . - 0 ID=Thaps261258;Parent=Thaps261258;rank=1 chr2 . exon 454286 455033 . - . ID=Thaps261258.1;Parent=Thaps261258;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 452589 453762 . - . ID=Thaps268196;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ0];external_name=Thaps268196;logic_name=jgi_thaps3 chr2 ensembl transcript 452589 453762 . - . ID=Thaps268196;Parent=Thaps268196;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 452589 452962 . - 0 ID=Thaps268196;Parent=Thaps268196;rank=4 chr2 . exon 452589 452962 . - . ID=Thaps268196.4;Parent=Thaps268196;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 453089 453259 . - 0 ID=Thaps268196;Parent=Thaps268196;rank=3 chr2 . exon 453089 453259 . - . ID=Thaps268196.3;Parent=Thaps268196;constitutive=1;rank=3 chr2 . CDS 453332 453475 . - 0 ID=Thaps268196;Parent=Thaps268196;rank=2 chr2 . exon 453332 453475 . - . ID=Thaps268196.2;Parent=Thaps268196;constitutive=1;rank=2 chr2 . CDS 453552 453762 . - 0 ID=Thaps268196;Parent=Thaps268196;rank=1 chr2 . exon 453552 453762 . - . ID=Thaps268196.1;Parent=Thaps268196;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 468609 468683 . ? . description=trf chr2 ensembl protein_coding_gene 460077 462669 . + . ID=Thaps21172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ2];external_name=Thaps21172;logic_name=jgi_thaps3 chr2 ensembl transcript 460077 462669 . + . ID=Thaps21172;Parent=Thaps21172;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 460077 462113 . + 0 ID=Thaps21172;Parent=Thaps21172;rank=1 chr2 . exon 460077 462113 . + . ID=Thaps21172.1;Parent=Thaps21172;constitutive=1;rank=1 chr2 . CDS 462193 462669 . + 0 ID=Thaps21172;Parent=Thaps21172;rank=2 chr2 . exon 462193 462669 . + . ID=Thaps21172.2;Parent=Thaps21172;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 464863 468366 . - . ID=Thaps21173;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ4];external_name=Thaps21173;logic_name=jgi_thaps3 chr2 ensembl transcript 464863 468366 . - . ID=Thaps21173;Parent=Thaps21173;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 464863 465950 . - 0 ID=Thaps21173;Parent=Thaps21173;rank=3 chr2 . exon 464863 465950 . - . ID=Thaps21173.3;Parent=Thaps21173;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 466032 466754 . - 0 ID=Thaps21173;Parent=Thaps21173;rank=2 chr2 . exon 466032 466754 . - . ID=Thaps21173.2;Parent=Thaps21173;constitutive=1;rank=2 chr2 . CDS 466788 468366 . - 0 ID=Thaps21173;Parent=Thaps21173;rank=1 chr2 . exon 466788 468366 . - . ID=Thaps21173.1;Parent=Thaps21173;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 462836 463993 . - . ID=Thaps2215;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ3];external_name=Thaps2215;logic_name=jgi_thaps3 chr2 ensembl transcript 462836 463993 . - . ID=Thaps2215;Parent=Thaps2215;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 462836 463331 . - 0 ID=Thaps2215;Parent=Thaps2215;rank=2 chr2 . exon 462836 463331 . - . ID=Thaps2215.2;Parent=Thaps2215;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 463356 463993 . - 0 ID=Thaps2215;Parent=Thaps2215;rank=1 chr2 . exon 463356 463993 . - . ID=Thaps2215.1;Parent=Thaps2215;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 469042 469512 . - . ID=Thaps2217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ5];external_name=Thaps2217;logic_name=jgi_thaps3 chr2 ensembl transcript 469042 469512 . - . ID=Thaps2217;Parent=Thaps2217;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 469042 469512 . - 0 ID=Thaps2217;Parent=Thaps2217;rank=1 chr2 . exon 469042 469512 . - . ID=Thaps2217.1;Parent=Thaps2217;constitutive=1;rank=1 chr2 . repeat_region 472547 472709 . + . description=Copia7I_TP chr2 . repeat_region 472756 472805 . ? . description=dust chr2 ensembl protein_coding_gene 470241 471466 . - . ID=Thaps2218;biotype=protein_coding;description=Putative uncharacterized protein HSF20 [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ6];external_name=HSF20;logic_name=jgi_thaps3 chr2 ensembl transcript 470241 471466 . - . ID=Thaps2218;Parent=Thaps2218;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 470241 470772 . - 0 ID=Thaps2218;Parent=Thaps2218;rank=3 chr2 . exon 470241 470772 . - . ID=Thaps2218.3;Parent=Thaps2218;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 470854 470933 . - 0 ID=Thaps2218;Parent=Thaps2218;rank=2 chr2 . exon 470854 470933 . - . ID=Thaps2218.2;Parent=Thaps2218;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 471032 471466 . - 0 ID=Thaps2218;Parent=Thaps2218;rank=1 chr2 . exon 471032 471466 . - . ID=Thaps2218.1;Parent=Thaps2218;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 472037 473792 . - . ID=Thaps2219;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ7];external_name=Thaps2219;logic_name=jgi_thaps3 chr2 ensembl transcript 472037 473792 . - . ID=Thaps2219;Parent=Thaps2219;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 472037 472123 . - 0 ID=Thaps2219;Parent=Thaps2219;rank=5 chr2 . exon 472037 472123 . - . ID=Thaps2219.5;Parent=Thaps2219;constitutive=1;rank=5 chr2 . CDS 472159 472284 . - 0 ID=Thaps2219;Parent=Thaps2219;rank=4 chr2 . exon 472159 472284 . - . ID=Thaps2219.4;Parent=Thaps2219;constitutive=1;rank=4 chr2 . CDS 472830 473100 . - 0 ID=Thaps2219;Parent=Thaps2219;rank=3 chr2 . exon 472830 473100 . - . ID=Thaps2219.3;Parent=Thaps2219;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 473181 473302 . - 0 ID=Thaps2219;Parent=Thaps2219;rank=2 chr2 . exon 473181 473302 . - . ID=Thaps2219.2;Parent=Thaps2219;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 473358 473792 . - 0 ID=Thaps2219;Parent=Thaps2219;rank=1 chr2 . exon 473358 473792 . - . ID=Thaps2219.1;Parent=Thaps2219;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 474480 475602 . + . ID=Thaps2220;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ8];external_name=Thaps2220;logic_name=jgi_thaps3 chr2 ensembl transcript 474480 475602 . + . ID=Thaps2220;Parent=Thaps2220;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 474480 474987 . + 0 ID=Thaps2220;Parent=Thaps2220;rank=1 chr2 . exon 474480 474987 . + . ID=Thaps2220.1;Parent=Thaps2220;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 475079 475602 . + 0 ID=Thaps2220;Parent=Thaps2220;rank=2 chr2 . exon 475079 475602 . + . ID=Thaps2220.2;Parent=Thaps2220;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 478630 481790 . + . ID=Thaps2222;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTR0];external_name=Thaps2222;logic_name=jgi_thaps3 chr2 ensembl transcript 478630 481790 . + . ID=Thaps2222;Parent=Thaps2222;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 478630 481623 . + 0 ID=Thaps2222;Parent=Thaps2222;rank=1 chr2 . exon 478630 481623 . + . ID=Thaps2222.1;Parent=Thaps2222;constitutive=1;rank=1 chr2 . CDS 481653 481790 . + 0 ID=Thaps2222;Parent=Thaps2222;rank=2 chr2 ensembl protein_coding_gene 476041 477638 . - . ID=Thaps261260;biotype=protein_coding;description=Inorganic phosphate transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BTQ9];external_name=Thaps261260;logic_name=jgi_thaps3 chr2 ensembl transcript 476041 477638 . - . ID=Thaps261260;Parent=Thaps261260;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 476041 476417 . - 0 ID=Thaps261260;Parent=Thaps261260;rank=4 chr2 . exon 476041 476417 . - . ID=Thaps261260.4;Parent=Thaps261260;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 476688 476982 . - 0 ID=Thaps261260;Parent=Thaps261260;rank=3 chr2 . exon 476688 476982 . - . ID=Thaps261260.3;Parent=Thaps261260;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 477063 477297 . - 0 ID=Thaps261260;Parent=Thaps261260;rank=2 chr2 . exon 477063 477297 . - . ID=Thaps261260.2;Parent=Thaps261260;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 477383 477638 . - 0 ID=Thaps261260;Parent=Thaps261260;rank=1 chr2 . exon 477383 477638 . - . ID=Thaps261260.1;Parent=Thaps261260;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 479688 479742 . ? . description=trf chr2 ensembl protein_coding_gene 486307 488421 . + . ID=Thaps21175;biotype=protein_coding;description=Transketolase [Source:UniProtKB/TrEMBL%3BAcc:B8BTR4];external_name=TKT2;logic_name=jgi_thaps3 chr2 ensembl transcript 486307 488421 . + . ID=Thaps21175;Parent=Thaps21175;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 486307 486438 . + 0 ID=Thaps21175;Parent=Thaps21175;rank=1 chr2 . exon 486307 486438 . + . ID=Thaps21175.1;Parent=Thaps21175;constitutive=1;rank=1 chr2 . CDS 486562 488421 . + 0 ID=Thaps21175;Parent=Thaps21175;rank=2 chr2 . exon 486562 488421 . + . ID=Thaps21175.2;Parent=Thaps21175;constitutive=1;rank=2 chr2 . exon 481653 481790 . + . ID=Thaps2222.2;Parent=Thaps2222;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 483112 483753 . + . ID=Thaps2224;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTR2];external_name=Thaps2224;logic_name=jgi_thaps3 chr2 ensembl transcript 483112 483753 . + . ID=Thaps2224;Parent=Thaps2224;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 483112 483753 . + 0 ID=Thaps2224;Parent=Thaps2224;rank=1 chr2 . exon 483112 483753 . + . ID=Thaps2224.1;Parent=Thaps2224;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 488966 489835 . + . ID=Thaps2227;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTR5];external_name=Thaps2227;logic_name=jgi_thaps3 chr2 ensembl transcript 488966 489835 . + . ID=Thaps2227;Parent=Thaps2227;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 488966 489835 . + 0 ID=Thaps2227;Parent=Thaps2227;rank=1 chr2 . exon 488966 489835 . + . ID=Thaps2227.1;Parent=Thaps2227;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 484822 485494 . - . ID=Thaps261261;biotype=protein_coding;description=ArfGAP [Source:UniProtKB/TrEMBL%3BAcc:B8BTR3];external_name=Thaps261261;logic_name=jgi_thaps3 chr2 ensembl transcript 484822 485494 . - . ID=Thaps261261;Parent=Thaps261261;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 484822 485067 . - 0 ID=Thaps261261;Parent=Thaps261261;rank=2 chr2 . exon 484822 485067 . - . ID=Thaps261261.2;Parent=Thaps261261;constitutive=1;rank=2 chr2 . CDS 485260 485494 . - 0 ID=Thaps261261;Parent=Thaps261261;rank=1 chr2 . exon 485260 485494 . - . ID=Thaps261261.1;Parent=Thaps261261;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 482011 482735 . - . ID=Thaps32191;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTR1];external_name=Thaps32191;logic_name=jgi_thaps3 chr2 ensembl transcript 482011 482735 . - . ID=Thaps32191;Parent=Thaps32191;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 482011 482401 . - 0 ID=Thaps32191;Parent=Thaps32191;rank=2 chr2 . exon 482011 482401 . - . ID=Thaps32191.2;Parent=Thaps32191;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 482485 482735 . - 0 ID=Thaps32191;Parent=Thaps32191;rank=1 chr2 . exon 482485 482735 . - . ID=Thaps32191.1;Parent=Thaps32191;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 495256 495277 . ? . description=dust chr2 ensembl protein_coding_gene 489965 492106 . - . ID=Thaps21176;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTR6];external_name=Thaps21176;logic_name=jgi_thaps3 chr2 ensembl transcript 489965 492106 . - . ID=Thaps21176;Parent=Thaps21176;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 489965 492106 . - 0 ID=Thaps21176;Parent=Thaps21176;rank=1 chr2 . exon 489965 492106 . - . ID=Thaps21176.1;Parent=Thaps21176;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 492489 493660 . + . ID=Thaps21177;biotype=protein_coding;description=Dihydrolipoamide s-acetyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BTR7];external_name=LAT1_2;logic_name=jgi_thaps3 chr2 ensembl transcript 492489 493660 . + . ID=Thaps21177;Parent=Thaps21177;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 492489 492665 . + 0 ID=Thaps21177;Parent=Thaps21177;rank=1 chr2 . exon 492489 492665 . + . ID=Thaps21177.1;Parent=Thaps21177;constitutive=1;rank=1 chr2 . CDS 492763 493027 . + 0 ID=Thaps21177;Parent=Thaps21177;rank=2 chr2 . exon 492763 493027 . + . ID=Thaps21177.2;Parent=Thaps21177;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 493116 493660 . + 0 ID=Thaps21177;Parent=Thaps21177;rank=3 chr2 . exon 493116 493660 . + . ID=Thaps21177.3;Parent=Thaps21177;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 495690 498068 . + . ID=Thaps21178;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTR8];external_name=Thaps21178;logic_name=jgi_thaps3 chr2 ensembl transcript 495690 498068 . + . ID=Thaps21178;Parent=Thaps21178;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 495690 498068 . + 0 ID=Thaps21178;Parent=Thaps21178;rank=1 chr2 . exon 495690 498068 . + . ID=Thaps21178.1;Parent=Thaps21178;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 498519 499019 . - . ID=Thaps39417;biotype=protein_coding;description=V-type ATPaseVacuolar ATP synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BTR9];external_name=VAT4;logic_name=jgi_thaps3 chr2 ensembl transcript 498519 499019 . - . ID=Thaps39417;Parent=Thaps39417;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 498519 499019 . - 0 ID=Thaps39417;Parent=Thaps39417;rank=1 chr2 . exon 498519 499019 . - . ID=Thaps39417.1;Parent=Thaps39417;constitutive=1;rank=1 chr2 . biological_region 508640 508641 0.999 - . logic_name=eponine chr2 ensembl protein_coding_gene 500147 500762 . + . ID=Thaps2233;biotype=protein_coding;description=V-type ATPaseVacuolar ATP synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BTR9];external_name=VAT4;logic_name=jgi_thaps3 chr2 ensembl transcript 500147 500762 . + . ID=Thaps2233;Parent=Thaps2233;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 500147 500588 . + 0 ID=Thaps2233;Parent=Thaps2233;rank=1 chr2 . exon 500147 500588 . + . ID=Thaps2233.1;Parent=Thaps2233;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 500704 500762 . + 0 ID=Thaps2233;Parent=Thaps2233;rank=2 chr2 . exon 500704 500762 . + . ID=Thaps2233.2;Parent=Thaps2233;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 506360 508379 . - . ID=Thaps2235;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTS2];external_name=Thaps2235;logic_name=jgi_thaps3 chr2 ensembl transcript 506360 508379 . - . ID=Thaps2235;Parent=Thaps2235;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 506360 506430 . - 0 ID=Thaps2235;Parent=Thaps2235;rank=2 chr2 . exon 506360 506430 . - . ID=Thaps2235.2;Parent=Thaps2235;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 506732 508379 . - 0 ID=Thaps2235;Parent=Thaps2235;rank=1 chr2 . exon 506732 508379 . - . ID=Thaps2235.1;Parent=Thaps2235;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 501941 502126 . - . ID=Thaps268202;biotype=protein_coding;description=50S ribosomal protein L34 [Source:UniProtKB/TrEMBL%3BAcc:B8BTS1];external_name=RM34;logic_name=jgi_thaps3 chr2 ensembl transcript 501941 502126 . - . ID=Thaps268202;Parent=Thaps268202;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 501941 502126 . - 0 ID=Thaps268202;Parent=Thaps268202;rank=1 chr2 . exon 501941 502126 . - . ID=Thaps268202.1;Parent=Thaps268202;constitutive=1;rank=1 chr2 . repeat_region 509903 509928 . ? . description=dust chr2 . repeat_region 517031 517081 . ? . description=dust chr2 . repeat_region 518477 518495 . ? . description=dust chr2 ensembl tRNA_gene 509967 510048 . + . ID=EPrTPOG00000000090;biotype=tRNA;description=tRNA-Leu for anticodon AAG [Source:TRNASCAN_SE%3BAcc:tRNA-Leu];external_name=tRNA-Leu;logic_name=ncrna_eg chr2 ensembl transcript 509967 510048 . + . ID=EPrTPOT00000000090;Parent=EPrTPOG00000000090;biotype=tRNA;logic_name=ncrna_eg chr2 ensembl tRNA_gene 514566 514647 . - . ID=EPrTPOG00000000113;biotype=tRNA;description=tRNA-Leu for anticodon AAG [Source:TRNASCAN_SE%3BAcc:tRNA-Leu];external_name=tRNA-Leu;logic_name=ncrna_eg chr2 ensembl transcript 514566 514647 . - . ID=EPrTPOT00000000113;Parent=EPrTPOG00000000113;biotype=tRNA;logic_name=ncrna_eg chr2 . exon 509967 510048 . + . ID=EPrTPOE00000000090;Parent=EPrTPOT00000000090;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 514566 514647 . - . ID=EPrTPOE00000000113;Parent=EPrTPOT00000000113;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 517260 518929 . + . ID=Thaps21184;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTS6];external_name=Thaps21184;logic_name=jgi_thaps3 chr2 ensembl transcript 517260 518929 . + . ID=Thaps21184;Parent=Thaps21184;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 517260 517761 . + 0 ID=Thaps21184;Parent=Thaps21184;rank=1 chr2 . exon 517260 517761 . + . ID=Thaps21184.1;Parent=Thaps21184;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 517929 518929 . + 0 ID=Thaps21184;Parent=Thaps21184;rank=2 chr2 . exon 517929 518929 . + . ID=Thaps21184.2;Parent=Thaps21184;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 512711 514135 . + . ID=Thaps2237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTS4];external_name=Thaps2237;logic_name=jgi_thaps3 chr2 ensembl transcript 512711 514135 . + . ID=Thaps2237;Parent=Thaps2237;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 512711 514135 . + 0 ID=Thaps2237;Parent=Thaps2237;rank=1 chr2 . exon 512711 514135 . + . ID=Thaps2237.1;Parent=Thaps2237;constitutive=1;rank=1 chr2 ensembl gene 515604 516462 . - . ID=Thaps261270;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr2 ensembl transcript 515604 516462 . - . ID=Thaps261270;Parent=Thaps261270;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr2 . exon 515604 515800 . - . ID=Thaps261270.5;Parent=Thaps261270;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . exon 515831 515939 . - . ID=Thaps261270.4;Parent=Thaps261270;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . exon 515958 516092 . - . ID=Thaps261270.3;Parent=Thaps261270;constitutive=1;rank=3 chr2 . exon 516206 516327 . - . ID=Thaps261270.2;Parent=Thaps261270;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . exon 516370 516462 . - . ID=Thaps261270.1;Parent=Thaps261270;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 515001 515467 . + . ID=Thaps268204;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTS5];external_name=Thaps268204;logic_name=jgi_thaps3 chr2 ensembl transcript 515001 515467 . + . ID=Thaps268204;Parent=Thaps268204;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 515001 515151 . + 0 ID=Thaps268204;Parent=Thaps268204;rank=1 chr2 . exon 515001 515151 . + . ID=Thaps268204.1;Parent=Thaps268204;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 515217 515467 . + 0 ID=Thaps268204;Parent=Thaps268204;rank=2 chr2 . exon 515217 515467 . + . ID=Thaps268204.2;Parent=Thaps268204;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 510502 511131 . - . ID=Thaps39424;biotype=protein_coding;description=RL12%2C ribosomal protein 11 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BTS3];external_name=RL12;logic_name=jgi_thaps3 chr2 ensembl transcript 510502 511131 . - . ID=Thaps39424;Parent=Thaps39424;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 510502 510962 . - 0 ID=Thaps39424;Parent=Thaps39424;rank=2 chr2 . exon 510502 510962 . - . ID=Thaps39424.2;Parent=Thaps39424;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 511098 511131 . - 0 ID=Thaps39424;Parent=Thaps39424;rank=1 chr2 . exon 511098 511131 . - . ID=Thaps39424.1;Parent=Thaps39424;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 525036 525079 . ? . description=trf chr2 . repeat_region 525303 525404 . - . description=Copia9LTR_TP chr2 . repeat_region 525408 525506 . - . description=Copia9I_TP chr2 . repeat_region 525539 525583 . - . description=Copia9I_TP chr2 . repeat_region 526086 526516 . - . description=Copia9I_TP chr2 . repeat_region 526524 526586 . - . description=Copia9I_TP chr2 . repeat_region 526611 526780 . - . description=Copia9I_TP chr2 . repeat_region 526779 527158 . - . description=Copia9I_TP chr2 . repeat_region 527552 527960 . - . description=Copia5LTR_TP chr2 ensembl protein_coding_gene 523412 525238 . - . ID=Thaps21186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTS9];external_name=Thaps21186;logic_name=jgi_thaps3 chr2 ensembl transcript 523412 525238 . - . ID=Thaps21186;Parent=Thaps21186;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 523412 524313 . - 0 ID=Thaps21186;Parent=Thaps21186;rank=3 chr2 . exon 523412 524313 . - . ID=Thaps21186.3;Parent=Thaps21186;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 524464 524629 . - 0 ID=Thaps21186;Parent=Thaps21186;rank=2 chr2 . exon 524464 524629 . - . ID=Thaps21186.2;Parent=Thaps21186;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 524807 525238 . - 0 ID=Thaps21186;Parent=Thaps21186;rank=1 chr2 . exon 524807 525238 . - . ID=Thaps21186.1;Parent=Thaps21186;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 519973 522138 . - . ID=Thaps2240;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTS7];external_name=Thaps2240;logic_name=jgi_thaps3 chr2 ensembl transcript 519973 522138 . - . ID=Thaps2240;Parent=Thaps2240;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 519973 522138 . - 0 ID=Thaps2240;Parent=Thaps2240;rank=1 chr2 . exon 519973 522138 . - . ID=Thaps2240.1;Parent=Thaps2240;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 522491 523153 . + . ID=Thaps2241;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTS8];external_name=Thaps2241;logic_name=jgi_thaps3 chr2 ensembl transcript 522491 523153 . + . ID=Thaps2241;Parent=Thaps2241;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 522491 523153 . + 0 ID=Thaps2241;Parent=Thaps2241;rank=1 chr2 . exon 522491 523153 . + . ID=Thaps2241.1;Parent=Thaps2241;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 528055 530286 . + . ID=Thaps2243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTT0];external_name=Thaps2243;logic_name=jgi_thaps3 chr2 ensembl transcript 528055 530286 . + . ID=Thaps2243;Parent=Thaps2243;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 528055 530286 . + 0 ID=Thaps2243;Parent=Thaps2243;rank=1 chr2 . exon 528055 530286 . + . ID=Thaps2243.1;Parent=Thaps2243;constitutive=1;rank=1 chr2 . repeat_region 533335 533356 . ? . description=dust chr2 ensembl protein_coding_gene 531635 531943 . + . ID=Thaps2244;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTT2];external_name=Thaps2244;logic_name=jgi_thaps3 chr2 ensembl transcript 531635 531943 . + . ID=Thaps2244;Parent=Thaps2244;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 531635 531943 . + 0 ID=Thaps2244;Parent=Thaps2244;rank=1 chr2 . exon 531635 531943 . + . ID=Thaps2244.1;Parent=Thaps2244;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 536317 536760 . - . ID=Thaps2247;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTT6];external_name=Thaps2247;logic_name=jgi_thaps3 chr2 ensembl transcript 536317 536760 . - . ID=Thaps2247;Parent=Thaps2247;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 536317 536760 . - 0 ID=Thaps2247;Parent=Thaps2247;rank=1 chr2 . exon 536317 536760 . - . ID=Thaps2247.1;Parent=Thaps2247;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 535261 536190 . - . ID=Thaps26109;biotype=protein_coding;description=Phosphoribosyl pyrophosphate synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BTT5];external_name=PRS1;logic_name=jgi_thaps3 chr2 ensembl transcript 535261 536190 . - . ID=Thaps26109;Parent=Thaps26109;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 535261 536190 . - 0 ID=Thaps26109;Parent=Thaps26109;rank=1 chr2 . exon 535261 536190 . - . ID=Thaps26109.1;Parent=Thaps26109;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 530355 531277 . - . ID=Thaps261271;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTT1];external_name=Thaps261271;logic_name=jgi_thaps3 chr2 ensembl transcript 530355 531277 . - . ID=Thaps261271;Parent=Thaps261271;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 530355 531277 . - 0 ID=Thaps261271;Parent=Thaps261271;rank=1 chr2 . exon 530355 531277 . - . ID=Thaps261271.1;Parent=Thaps261271;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 533894 534404 . - . ID=Thaps261272;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTT4];external_name=Thaps261272;logic_name=jgi_thaps3 chr2 ensembl transcript 533894 534404 . - . ID=Thaps261272;Parent=Thaps261272;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 533894 534180 . - 0 ID=Thaps261272;Parent=Thaps261272;rank=2 chr2 . exon 533894 534180 . - . ID=Thaps261272.2;Parent=Thaps261272;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 534266 534404 . - 0 ID=Thaps261272;Parent=Thaps261272;rank=1 chr2 . exon 534266 534404 . - . ID=Thaps261272.1;Parent=Thaps261272;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 539138 539881 . + . ID=Thaps261275;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTT8];external_name=Thaps261275;logic_name=jgi_thaps3 chr2 ensembl transcript 539138 539881 . + . ID=Thaps261275;Parent=Thaps261275;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 539138 539668 . + 0 ID=Thaps261275;Parent=Thaps261275;rank=1 chr2 . exon 539138 539668 . + . ID=Thaps261275.1;Parent=Thaps261275;constitutive=1;rank=1 chr2 . CDS 539775 539881 . + 0 ID=Thaps261275;Parent=Thaps261275;rank=2 chr2 ensembl protein_coding_gene 537218 538049 . - . ID=Thaps268206;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTT7];external_name=Thaps268206;logic_name=jgi_thaps3 chr2 ensembl transcript 537218 538049 . - . ID=Thaps268206;Parent=Thaps268206;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 537218 537591 . - 0 ID=Thaps268206;Parent=Thaps268206;rank=2 chr2 . exon 537218 537591 . - . ID=Thaps268206.2;Parent=Thaps268206;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 537863 538049 . - 0 ID=Thaps268206;Parent=Thaps268206;rank=1 chr2 . exon 537863 538049 . - . ID=Thaps268206.1;Parent=Thaps268206;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 532695 533673 . + . ID=Thaps32273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTT3];external_name=Thaps32273;logic_name=jgi_thaps3 chr2 ensembl transcript 532695 533673 . + . ID=Thaps32273;Parent=Thaps32273;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 532695 532798 . + 0 ID=Thaps32273;Parent=Thaps32273;rank=1 chr2 . exon 532695 532798 . + . ID=Thaps32273.1;Parent=Thaps32273;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 532879 533108 . + 0 ID=Thaps32273;Parent=Thaps32273;rank=2 chr2 . exon 532879 533108 . + . ID=Thaps32273.2;Parent=Thaps32273;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 533199 533310 . + 0 ID=Thaps32273;Parent=Thaps32273;rank=3 chr2 . exon 533199 533310 . + . ID=Thaps32273.3;Parent=Thaps32273;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 533394 533673 . + 0 ID=Thaps32273;Parent=Thaps32273;rank=4 chr2 . exon 533394 533673 . + . ID=Thaps32273.4;Parent=Thaps32273;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 543844 549693 . - . ID=Thaps21190;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTU0];external_name=Thaps21190;logic_name=jgi_thaps3 chr2 ensembl transcript 543844 549693 . - . ID=Thaps21190;Parent=Thaps21190;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 543844 545865 . - 0 ID=Thaps21190;Parent=Thaps21190;rank=7 chr2 . exon 543844 545865 . - . ID=Thaps21190.7;Parent=Thaps21190;constitutive=1;rank=7 chr2 . CDS 546072 546805 . - 0 ID=Thaps21190;Parent=Thaps21190;rank=6 chr2 . exon 546072 546805 . - . ID=Thaps21190.6;Parent=Thaps21190;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 546894 547620 . - 0 ID=Thaps21190;Parent=Thaps21190;rank=5 chr2 . exon 546894 547620 . - . ID=Thaps21190.5;Parent=Thaps21190;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 547704 547868 . - 0 ID=Thaps21190;Parent=Thaps21190;rank=4 chr2 . exon 547704 547868 . - . ID=Thaps21190.4;Parent=Thaps21190;constitutive=1;rank=4 chr2 . CDS 547949 549306 . - 0 ID=Thaps21190;Parent=Thaps21190;rank=3 chr2 . exon 547949 549306 . - . ID=Thaps21190.3;Parent=Thaps21190;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 549363 549419 . - 0 ID=Thaps21190;Parent=Thaps21190;rank=2 chr2 . exon 549363 549419 . - . ID=Thaps21190.2;Parent=Thaps21190;constitutive=1;rank=2 chr2 . CDS 549516 549693 . - 0 ID=Thaps21190;Parent=Thaps21190;rank=1 chr2 ensembl protein_coding_gene 540354 542914 . - . ID=Thaps2250;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTT9];external_name=Thaps2250;logic_name=jgi_thaps3 chr2 ensembl transcript 540354 542914 . - . ID=Thaps2250;Parent=Thaps2250;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 540354 540674 . - 0 ID=Thaps2250;Parent=Thaps2250;rank=4 chr2 . exon 540354 540674 . - . ID=Thaps2250.4;Parent=Thaps2250;constitutive=1;rank=4 chr2 . CDS 540765 541166 . - 0 ID=Thaps2250;Parent=Thaps2250;rank=3 chr2 . exon 540765 541166 . - . ID=Thaps2250.3;Parent=Thaps2250;constitutive=1;rank=3 chr2 . CDS 541271 542245 . - 0 ID=Thaps2250;Parent=Thaps2250;rank=2 chr2 . exon 541271 542245 . - . ID=Thaps2250.2;Parent=Thaps2250;constitutive=1;rank=2 chr2 . CDS 542354 542914 . - 0 ID=Thaps2250;Parent=Thaps2250;rank=1 chr2 . exon 542354 542914 . - . ID=Thaps2250.1;Parent=Thaps2250;constitutive=1;rank=1 chr2 . exon 539775 539881 . + . ID=Thaps261275.2;Parent=Thaps261275;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 556713 556825 . + . description=Harbinger3_TP chr2 . exon 549516 549693 . - . ID=Thaps21190.1;Parent=Thaps21190;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 554246 556102 . + . ID=Thaps2253;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTU2];external_name=Thaps2253;logic_name=jgi_thaps3 chr2 ensembl transcript 554246 556102 . + . ID=Thaps2253;Parent=Thaps2253;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 554246 556102 . + 0 ID=Thaps2253;Parent=Thaps2253;rank=1 chr2 . exon 554246 556102 . + . ID=Thaps2253.1;Parent=Thaps2253;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 556238 556638 . - . ID=Thaps261278;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTU3];external_name=Thaps261278;logic_name=jgi_thaps3 chr2 ensembl transcript 556238 556638 . - . ID=Thaps261278;Parent=Thaps261278;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 556238 556499 . - 0 ID=Thaps261278;Parent=Thaps261278;rank=2 chr2 . exon 556238 556499 . - . ID=Thaps261278.2;Parent=Thaps261278;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 556594 556638 . - 0 ID=Thaps261278;Parent=Thaps261278;rank=1 chr2 . exon 556594 556638 . - . ID=Thaps261278.1;Parent=Thaps261278;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 552391 553167 . - . ID=Thaps268208;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTU1];external_name=Thaps268208;logic_name=jgi_thaps3 chr2 ensembl transcript 552391 553167 . - . ID=Thaps268208;Parent=Thaps268208;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 552391 553167 . - 0 ID=Thaps268208;Parent=Thaps268208;rank=1 chr2 . exon 552391 553167 . - . ID=Thaps268208.1;Parent=Thaps268208;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 558031 559282 . + . ID=Thaps31923;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTU4];external_name=Thaps31923;logic_name=jgi_thaps3 chr2 ensembl transcript 558031 559282 . + . ID=Thaps31923;Parent=Thaps31923;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 558031 558099 . + 0 ID=Thaps31923;Parent=Thaps31923;rank=1 chr2 . exon 558031 558099 . + . ID=Thaps31923.1;Parent=Thaps31923;constitutive=1;rank=1 chr2 . CDS 558194 558396 . + 0 ID=Thaps31923;Parent=Thaps31923;rank=2 chr2 . exon 558194 558396 . + . ID=Thaps31923.2;Parent=Thaps31923;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 558475 558520 . + 0 ID=Thaps31923;Parent=Thaps31923;rank=3 chr2 . exon 558475 558520 . + . ID=Thaps31923.3;Parent=Thaps31923;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 558638 559282 . + 0 ID=Thaps31923;Parent=Thaps31923;rank=4 chr2 . exon 558638 559282 . + . ID=Thaps31923.4;Parent=Thaps31923;constitutive=1;rank=4 chr2 . repeat_region 559734 559742 . ? . description=dust chr2 . repeat_region 559776 559924 . - . description=TE2a_TP chr2 . repeat_region 560041 560240 . - . description=Gypsy1ALTR_TP chr2 . repeat_region 566812 566834 . ? . description=dust chr2 ensembl protein_coding_gene 567336 568298 . + . ID=Thaps21193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTU7];external_name=Thaps21193;logic_name=jgi_thaps3 chr2 ensembl transcript 567336 568298 . + . ID=Thaps21193;Parent=Thaps21193;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 567336 568298 . + 0 ID=Thaps21193;Parent=Thaps21193;rank=1 chr2 . exon 567336 568298 . + . ID=Thaps21193.1;Parent=Thaps21193;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 560818 562542 . + . ID=Thaps261279;biotype=protein_coding;description=Diacylglycerol acyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BTU5];external_name=DGT;logic_name=jgi_thaps3 chr2 ensembl transcript 560818 562542 . + . ID=Thaps261279;Parent=Thaps261279;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 560818 560847 . + 0 ID=Thaps261279;Parent=Thaps261279;rank=1 chr2 . exon 560818 560847 . + . ID=Thaps261279.1;Parent=Thaps261279;constitutive=1;rank=1 chr2 . CDS 561083 561992 . + 0 ID=Thaps261279;Parent=Thaps261279;rank=2 chr2 . exon 561083 561992 . + . ID=Thaps261279.2;Parent=Thaps261279;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 562074 562279 . + 0 ID=Thaps261279;Parent=Thaps261279;rank=3 chr2 . exon 562074 562279 . + . ID=Thaps261279.3;Parent=Thaps261279;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 562393 562542 . + 0 ID=Thaps261279;Parent=Thaps261279;rank=4 chr2 . exon 562393 562542 . + . ID=Thaps261279.4;Parent=Thaps261279;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 563788 564959 . - . ID=Thaps32374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTU6];external_name=Thaps32374;logic_name=jgi_thaps3 chr2 ensembl transcript 563788 564959 . - . ID=Thaps32374;Parent=Thaps32374;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 563788 563994 . - 0 ID=Thaps32374;Parent=Thaps32374;rank=2 chr2 . exon 563788 563994 . - . ID=Thaps32374.2;Parent=Thaps32374;constitutive=1;rank=2 chr2 . CDS 564072 564959 . - 0 ID=Thaps32374;Parent=Thaps32374;rank=1 chr2 . exon 564072 564959 . - . ID=Thaps32374.1;Parent=Thaps32374;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 569815 570618 . + . ID=Thaps21194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTU8];external_name=Thaps21194;logic_name=jgi_thaps3 chr2 ensembl transcript 569815 570618 . + . ID=Thaps21194;Parent=Thaps21194;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 569815 570618 . + 0 ID=Thaps21194;Parent=Thaps21194;rank=1 chr2 . exon 569815 570618 . + . ID=Thaps21194.1;Parent=Thaps21194;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 570665 572332 . - . ID=Thaps21195;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTU9];external_name=Thaps21195;logic_name=jgi_thaps3 chr2 ensembl transcript 570665 572332 . - . ID=Thaps21195;Parent=Thaps21195;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 570665 572332 . - 0 ID=Thaps21195;Parent=Thaps21195;rank=1 chr2 . exon 570665 572332 . - . ID=Thaps21195.1;Parent=Thaps21195;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 575910 576689 . - . ID=Thaps2262;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTV3];external_name=Thaps2262;logic_name=jgi_thaps3 chr2 ensembl transcript 575910 576689 . - . ID=Thaps2262;Parent=Thaps2262;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 575910 576689 . - 0 ID=Thaps2262;Parent=Thaps2262;rank=1 chr2 . exon 575910 576689 . - . ID=Thaps2262.1;Parent=Thaps2262;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 573541 574137 . - . ID=Thaps261283;biotype=protein_coding;description=SsrA binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTV1];external_name=Thaps261283;logic_name=jgi_thaps3 chr2 ensembl transcript 573541 574137 . - . ID=Thaps261283;Parent=Thaps261283;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 573541 573571 . - 0 ID=Thaps261283;Parent=Thaps261283;rank=3 chr2 . exon 573541 573571 . - . ID=Thaps261283.3;Parent=Thaps261283;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 573658 573975 . - 0 ID=Thaps261283;Parent=Thaps261283;rank=2 chr2 . exon 573658 573975 . - . ID=Thaps261283.2;Parent=Thaps261283;constitutive=1;rank=2 chr2 . CDS 574058 574137 . - 0 ID=Thaps261283;Parent=Thaps261283;rank=1 chr2 . exon 574058 574137 . - . ID=Thaps261283.1;Parent=Thaps261283;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 574433 575862 . + . ID=Thaps261284;biotype=protein_coding;description=Aldo/keto reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BTV2];external_name=Thaps261284;logic_name=jgi_thaps3 chr2 ensembl transcript 574433 575862 . + . ID=Thaps261284;Parent=Thaps261284;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 574433 574686 . + 0 ID=Thaps261284;Parent=Thaps261284;rank=1 chr2 . exon 574433 574686 . + . ID=Thaps261284.1;Parent=Thaps261284;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 574756 574779 . + 0 ID=Thaps261284;Parent=Thaps261284;rank=2 chr2 . exon 574756 574779 . + . ID=Thaps261284.2;Parent=Thaps261284;constitutive=1;rank=2 chr2 . CDS 574872 575038 . + 0 ID=Thaps261284;Parent=Thaps261284;rank=3 chr2 . exon 574872 575038 . + . ID=Thaps261284.3;Parent=Thaps261284;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 575117 575862 . + 0 ID=Thaps261284;Parent=Thaps261284;rank=4 chr2 . exon 575117 575862 . + . ID=Thaps261284.4;Parent=Thaps261284;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 577445 578993 . + . ID=Thaps261285;biotype=protein_coding;description=HSP70 domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTV4];external_name=Thaps261285;logic_name=jgi_thaps3 chr2 ensembl transcript 577445 578993 . + . ID=Thaps261285;Parent=Thaps261285;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 577445 577495 . + 0 ID=Thaps261285;Parent=Thaps261285;rank=1 chr2 . exon 577445 577495 . + . ID=Thaps261285.1;Parent=Thaps261285;constitutive=1;rank=1 chr2 . CDS 577709 577747 . + 0 ID=Thaps261285;Parent=Thaps261285;rank=2 chr2 . exon 577709 577747 . + . ID=Thaps261285.2;Parent=Thaps261285;constitutive=1;rank=2 chr2 . CDS 577759 577913 . + 0 ID=Thaps261285;Parent=Thaps261285;rank=3 chr2 . exon 577759 577913 . + . ID=Thaps261285.3;Parent=Thaps261285;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 577983 578590 . + 0 ID=Thaps261285;Parent=Thaps261285;rank=4 chr2 . exon 577983 578590 . + . ID=Thaps261285.4;Parent=Thaps261285;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 578789 578993 . + 0 ID=Thaps261285;Parent=Thaps261285;rank=5 chr2 . exon 578789 578993 . + . ID=Thaps261285.5;Parent=Thaps261285;constitutive=1;ensembl_end_phase=1;rank=5 chr2 ensembl protein_coding_gene 579252 580002 . + . ID=Thaps268213;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTV5];external_name=Thaps268213;logic_name=jgi_thaps3 chr2 ensembl transcript 579252 580002 . + . ID=Thaps268213;Parent=Thaps268213;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 579252 579395 . + 0 ID=Thaps268213;Parent=Thaps268213;rank=1 chr2 . exon 579252 579395 . + . ID=Thaps268213.1;Parent=Thaps268213;constitutive=1;rank=1 chr2 . CDS 579544 580002 . + 0 ID=Thaps268213;Parent=Thaps268213;rank=2 chr2 ensembl protein_coding_gene 572711 573266 . + . ID=Thaps26991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTV0];external_name=Thaps26991;logic_name=jgi_thaps3 chr2 ensembl transcript 572711 573266 . + . ID=Thaps26991;Parent=Thaps26991;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 572711 572827 . + 0 ID=Thaps26991;Parent=Thaps26991;rank=1 chr2 . exon 572711 572827 . + . ID=Thaps26991.1;Parent=Thaps26991;constitutive=1;rank=1 chr2 . CDS 573015 573266 . + 0 ID=Thaps26991;Parent=Thaps26991;rank=2 chr2 . exon 573015 573266 . + . ID=Thaps26991.2;Parent=Thaps26991;constitutive=1;rank=2 chr2 . repeat_region 581302 581309 . ? . description=dust chr2 . repeat_region 588238 588285 . ? . description=trf chr2 ensembl protein_coding_gene 585947 586651 . - . ID=Thaps16605;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTV7];external_name=Thaps16605;logic_name=jgi_thaps3 chr2 ensembl transcript 585947 586651 . - . ID=Thaps16605;Parent=Thaps16605;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 585947 586651 . - 0 ID=Thaps16605;Parent=Thaps16605;rank=1 chr2 . exon 585947 586651 . - . ID=Thaps16605.1;Parent=Thaps16605;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 587938 589137 . - . ID=Thaps2267;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTV9];external_name=Thaps2267;logic_name=jgi_thaps3 chr2 ensembl transcript 587938 589137 . - . ID=Thaps2267;Parent=Thaps2267;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 587938 589137 . - 0 ID=Thaps2267;Parent=Thaps2267;rank=1 chr2 . exon 587938 589137 . - . ID=Thaps2267.1;Parent=Thaps2267;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 581550 581861 . - . ID=Thaps261287;biotype=protein_coding;description=Translation initiation factor sui1-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTV6];external_name=Thaps261287;logic_name=jgi_thaps3 chr2 ensembl transcript 581550 581861 . - . ID=Thaps261287;Parent=Thaps261287;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 581550 581861 . - 0 ID=Thaps261287;Parent=Thaps261287;rank=1 chr2 . exon 581550 581861 . - . ID=Thaps261287.1;Parent=Thaps261287;constitutive=1;rank=1 chr2 . exon 579544 580002 . + . ID=Thaps268213.2;Parent=Thaps268213;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 587425 587781 . + . ID=Thaps32093;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTV8];external_name=Thaps32093;logic_name=jgi_thaps3 chr2 ensembl transcript 587425 587781 . + . ID=Thaps32093;Parent=Thaps32093;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 587425 587781 . + 0 ID=Thaps32093;Parent=Thaps32093;rank=1 chr2 . exon 587425 587781 . + . ID=Thaps32093.1;Parent=Thaps32093;constitutive=1;rank=1 chr2 . biological_region 591478 591480 0.999 - . logic_name=eponine chr2 ensembl protein_coding_gene 589597 590595 . - . ID=Thaps21200;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTW0];external_name=Thaps21200;logic_name=jgi_thaps3 chr2 ensembl transcript 589597 590595 . - . ID=Thaps21200;Parent=Thaps21200;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 589597 590595 . - 0 ID=Thaps21200;Parent=Thaps21200;rank=1 chr2 . exon 589597 590595 . - . ID=Thaps21200.1;Parent=Thaps21200;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 591004 594118 . + . ID=Thaps21201;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTW1];external_name=Thaps21201;logic_name=jgi_thaps3 chr2 ensembl transcript 591004 594118 . + . ID=Thaps21201;Parent=Thaps21201;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 591004 592908 . + 0 ID=Thaps21201;Parent=Thaps21201;rank=1 chr2 . exon 591004 592908 . + . ID=Thaps21201.1;Parent=Thaps21201;constitutive=1;rank=1 chr2 . CDS 593018 594118 . + 0 ID=Thaps21201;Parent=Thaps21201;rank=2 chr2 . exon 593018 594118 . + . ID=Thaps21201.2;Parent=Thaps21201;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 594338 595425 . - . ID=Thaps2270;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTW2];external_name=Thaps2270;logic_name=jgi_thaps3 chr2 ensembl transcript 594338 595425 . - . ID=Thaps2270;Parent=Thaps2270;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 594338 594346 . - 0 ID=Thaps2270;Parent=Thaps2270;rank=3 chr2 . exon 594338 594346 . - . ID=Thaps2270.3;Parent=Thaps2270;constitutive=1;rank=3 chr2 . CDS 594487 594848 . - 0 ID=Thaps2270;Parent=Thaps2270;rank=2 chr2 . exon 594487 594848 . - . ID=Thaps2270.2;Parent=Thaps2270;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 595005 595425 . - 0 ID=Thaps2270;Parent=Thaps2270;rank=1 chr2 . exon 595005 595425 . - . ID=Thaps2270.1;Parent=Thaps2270;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 598112 598960 . - . ID=Thaps2272;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTW4];external_name=Thaps2272;logic_name=jgi_thaps3 chr2 ensembl transcript 598112 598960 . - . ID=Thaps2272;Parent=Thaps2272;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 598112 598960 . - 0 ID=Thaps2272;Parent=Thaps2272;rank=1 chr2 . exon 598112 598960 . - . ID=Thaps2272.1;Parent=Thaps2272;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 596629 597765 . - . ID=Thaps268217;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTW3];external_name=Thaps268217;logic_name=jgi_thaps3 chr2 ensembl transcript 596629 597765 . - . ID=Thaps268217;Parent=Thaps268217;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 596629 597765 . - 0 ID=Thaps268217;Parent=Thaps268217;rank=1 chr2 . exon 596629 597765 . - . ID=Thaps268217.1;Parent=Thaps268217;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 602360 605937 . + . ID=Thaps21203;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTW6];external_name=Thaps21203;logic_name=jgi_thaps3 chr2 ensembl transcript 602360 605937 . + . ID=Thaps21203;Parent=Thaps21203;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 602360 604445 . + 0 ID=Thaps21203;Parent=Thaps21203;rank=1 chr2 . exon 602360 604445 . + . ID=Thaps21203.1;Parent=Thaps21203;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 604667 605098 . + 0 ID=Thaps21203;Parent=Thaps21203;rank=2 chr2 . exon 604667 605098 . + . ID=Thaps21203.2;Parent=Thaps21203;constitutive=1;rank=2 chr2 . CDS 605186 605937 . + 0 ID=Thaps21203;Parent=Thaps21203;rank=3 chr2 . exon 605186 605937 . + . ID=Thaps21203.3;Parent=Thaps21203;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 600010 602118 . - . ID=Thaps2273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTW5];external_name=Thaps2273;logic_name=jgi_thaps3 chr2 ensembl transcript 600010 602118 . - . ID=Thaps2273;Parent=Thaps2273;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 600010 600083 . - 0 ID=Thaps2273;Parent=Thaps2273;rank=3 chr2 . exon 600010 600083 . - . ID=Thaps2273.3;Parent=Thaps2273;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 600330 600585 . - 0 ID=Thaps2273;Parent=Thaps2273;rank=2 chr2 . exon 600330 600585 . - . ID=Thaps2273.2;Parent=Thaps2273;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 600667 602118 . - 0 ID=Thaps2273;Parent=Thaps2273;rank=1 chr2 . exon 600667 602118 . - . ID=Thaps2273.1;Parent=Thaps2273;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 606159 608644 . - . ID=Thaps261293;biotype=protein_coding;description=Importin beta-3 subunit%2C ran-binding protein 5 [Source:UniProtKB/TrEMBL%3BAcc:B8BTW7];external_name=Thaps261293;logic_name=jgi_thaps3 chr2 ensembl transcript 606159 608644 . - . ID=Thaps261293;Parent=Thaps261293;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 606159 606910 . - 0 ID=Thaps261293;Parent=Thaps261293;rank=7 chr2 . exon 606159 606910 . - . ID=Thaps261293.7;Parent=Thaps261293;constitutive=1;ensembl_end_phase=2;rank=7 chr2 . CDS 607000 607188 . - 0 ID=Thaps261293;Parent=Thaps261293;rank=6 chr2 . exon 607000 607188 . - . ID=Thaps261293.6;Parent=Thaps261293;constitutive=1;rank=6 chr2 . CDS 607262 607479 . - 0 ID=Thaps261293;Parent=Thaps261293;rank=5 chr2 . exon 607262 607479 . - . ID=Thaps261293.5;Parent=Thaps261293;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 607574 607665 . - 0 ID=Thaps261293;Parent=Thaps261293;rank=4 chr2 . exon 607574 607665 . - . ID=Thaps261293.4;Parent=Thaps261293;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 607708 608053 . - 0 ID=Thaps261293;Parent=Thaps261293;rank=3 chr2 . exon 607708 608053 . - . ID=Thaps261293.3;Parent=Thaps261293;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 608090 608470 . - 0 ID=Thaps261293;Parent=Thaps261293;rank=2 chr2 . exon 608090 608470 . - . ID=Thaps261293.2;Parent=Thaps261293;constitutive=1;rank=2 chr2 . CDS 608566 608644 . - 0 ID=Thaps261293;Parent=Thaps261293;rank=1 chr2 . exon 608566 608644 . - . ID=Thaps261293.1;Parent=Thaps261293;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 611050 611063 . ? . description=dust chr2 . repeat_region 614027 614072 . ? . description=dust chr2 . repeat_region 614034 614087 . ? . description=trf chr2 . repeat_region 616298 616362 . ? . description=trf chr2 . repeat_region 617163 617215 . ? . description=dust chr2 ensembl protein_coding_gene 611707 612288 . + . ID=Thaps17704;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTW9];external_name=Thaps17704;logic_name=jgi_thaps3 chr2 ensembl transcript 611707 612288 . + . ID=Thaps17704;Parent=Thaps17704;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 611707 612288 . + 0 ID=Thaps17704;Parent=Thaps17704;rank=1 chr2 . exon 611707 612288 . + . ID=Thaps17704.1;Parent=Thaps17704;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 612774 614073 . - . ID=Thaps2278;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTX0];external_name=Thaps2278;logic_name=jgi_thaps3 chr2 ensembl transcript 612774 614073 . - . ID=Thaps2278;Parent=Thaps2278;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 612774 612803 . - 0 ID=Thaps2278;Parent=Thaps2278;rank=3 chr2 . exon 612774 612803 . - . ID=Thaps2278.3;Parent=Thaps2278;constitutive=1;rank=3 chr2 . CDS 612830 613867 . - 0 ID=Thaps2278;Parent=Thaps2278;rank=2 chr2 . exon 612830 613867 . - . ID=Thaps2278.2;Parent=Thaps2278;constitutive=1;rank=2 chr2 . CDS 614008 614073 . - 0 ID=Thaps2278;Parent=Thaps2278;rank=1 chr2 . exon 614008 614073 . - . ID=Thaps2278.1;Parent=Thaps2278;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 616746 617453 . - . ID=Thaps2280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTX2];external_name=Thaps2280;logic_name=jgi_thaps3 chr2 ensembl transcript 616746 617453 . - . ID=Thaps2280;Parent=Thaps2280;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 616746 617161 . - 0 ID=Thaps2280;Parent=Thaps2280;rank=2 chr2 . exon 616746 617161 . - . ID=Thaps2280.2;Parent=Thaps2280;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 617306 617453 . - 0 ID=Thaps2280;Parent=Thaps2280;rank=1 chr2 . exon 617306 617453 . - . ID=Thaps2280.1;Parent=Thaps2280;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 617851 619197 . + . ID=Thaps268220;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTX3];external_name=Thaps268220;logic_name=jgi_thaps3 chr2 ensembl transcript 617851 619197 . + . ID=Thaps268220;Parent=Thaps268220;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 617851 619197 . + 0 ID=Thaps268220;Parent=Thaps268220;rank=1 chr2 . exon 617851 619197 . + . ID=Thaps268220.1;Parent=Thaps268220;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 610141 611141 . - . ID=Thaps27003;biotype=protein_coding;description=Methionine aminopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8BTW8];external_name=Thaps27003;logic_name=jgi_thaps3 chr2 ensembl transcript 610141 611141 . - . ID=Thaps27003;Parent=Thaps27003;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 610141 610782 . - 0 ID=Thaps27003;Parent=Thaps27003;rank=3 chr2 . exon 610141 610782 . - . ID=Thaps27003.3;Parent=Thaps27003;constitutive=1;rank=3 chr2 . CDS 610872 610992 . - 0 ID=Thaps27003;Parent=Thaps27003;rank=2 chr2 . exon 610872 610992 . - . ID=Thaps27003.2;Parent=Thaps27003;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 611068 611141 . - 0 ID=Thaps27003;Parent=Thaps27003;rank=1 chr2 . exon 611068 611141 . - . ID=Thaps27003.1;Parent=Thaps27003;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 614919 615620 . - . ID=Thaps31984;biotype=protein_coding;description=Serine acetyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BTX1];external_name=SAT2;logic_name=jgi_thaps3 chr2 ensembl transcript 614919 615620 . - . ID=Thaps31984;Parent=Thaps31984;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 614919 615620 . - 0 ID=Thaps31984;Parent=Thaps31984;rank=1 chr2 . exon 614919 615620 . - . ID=Thaps31984.1;Parent=Thaps31984;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 620486 621834 . - . ID=Thaps2282;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTX4];external_name=Thaps2282;logic_name=jgi_thaps3 chr2 ensembl transcript 620486 621834 . - . ID=Thaps2282;Parent=Thaps2282;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 620486 620512 . - 0 ID=Thaps2282;Parent=Thaps2282;rank=4 chr2 . exon 620486 620512 . - . ID=Thaps2282.4;Parent=Thaps2282;constitutive=1;rank=4 chr2 . CDS 620541 620825 . - 0 ID=Thaps2282;Parent=Thaps2282;rank=3 chr2 . exon 620541 620825 . - . ID=Thaps2282.3;Parent=Thaps2282;constitutive=1;rank=3 chr2 . CDS 620868 620994 . - 0 ID=Thaps2282;Parent=Thaps2282;rank=2 chr2 . exon 620868 620994 . - . ID=Thaps2282.2;Parent=Thaps2282;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 621074 621834 . - 0 ID=Thaps2282;Parent=Thaps2282;rank=1 chr2 . exon 621074 621834 . - . ID=Thaps2282.1;Parent=Thaps2282;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 625475 625858 . + . ID=Thaps2284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTX6];external_name=Thaps2284;logic_name=jgi_thaps3 chr2 ensembl transcript 625475 625858 . + . ID=Thaps2284;Parent=Thaps2284;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 625475 625858 . + 0 ID=Thaps2284;Parent=Thaps2284;rank=1 chr2 . exon 625475 625858 . + . ID=Thaps2284.1;Parent=Thaps2284;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 622220 623035 . - . ID=Thaps268221;biotype=protein_coding;description=MYB DNA binding protein/ transcription factor-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTX5];external_name=MYB17;logic_name=jgi_thaps3 chr2 ensembl transcript 622220 623035 . - . ID=Thaps268221;Parent=Thaps268221;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 622220 623035 . - 0 ID=Thaps268221;Parent=Thaps268221;rank=1 chr2 . exon 622220 623035 . - . ID=Thaps268221.1;Parent=Thaps268221;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 626338 627551 . - . ID=Thaps32064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTX7];external_name=Thaps32064;logic_name=jgi_thaps3 chr2 ensembl transcript 626338 627551 . - . ID=Thaps32064;Parent=Thaps32064;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 626338 627017 . - 0 ID=Thaps32064;Parent=Thaps32064;rank=3 chr2 . exon 626338 627017 . - . ID=Thaps32064.3;Parent=Thaps32064;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 627078 627301 . - 0 ID=Thaps32064;Parent=Thaps32064;rank=2 chr2 . exon 627078 627301 . - . ID=Thaps32064.2;Parent=Thaps32064;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 627427 627551 . - 0 ID=Thaps32064;Parent=Thaps32064;rank=1 chr2 . exon 627427 627551 . - . ID=Thaps32064.1;Parent=Thaps32064;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 628100 628531 . + . ID=Thaps32108;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTX8];external_name=Thaps32108;logic_name=jgi_thaps3 chr2 ensembl transcript 628100 628531 . + . ID=Thaps32108;Parent=Thaps32108;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 628100 628211 . + 0 ID=Thaps32108;Parent=Thaps32108;rank=1 chr2 . exon 628100 628211 . + . ID=Thaps32108.1;Parent=Thaps32108;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 628323 628531 . + 0 ID=Thaps32108;Parent=Thaps32108;rank=2 chr2 . exon 628323 628531 . + . ID=Thaps32108.2;Parent=Thaps32108;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 632446 632493 . ? . description=trf chr2 . repeat_region 639081 639104 . ? . description=trf chr2 . repeat_region 639081 639104 . ? . description=dust chr2 ensembl protein_coding_gene 630452 632309 . - . ID=Thaps21208;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY0];external_name=Thaps21208;logic_name=jgi_thaps3 chr2 ensembl transcript 630452 632309 . - . ID=Thaps21208;Parent=Thaps21208;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 630452 630606 . - 0 ID=Thaps21208;Parent=Thaps21208;rank=2 chr2 . exon 630452 630606 . - . ID=Thaps21208.2;Parent=Thaps21208;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 630644 632309 . - 0 ID=Thaps21208;Parent=Thaps21208;rank=1 chr2 . exon 630644 632309 . - . ID=Thaps21208.1;Parent=Thaps21208;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 636921 639752 . - . ID=Thaps21210;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY2];external_name=Thaps21210;logic_name=jgi_thaps3 chr2 ensembl transcript 636921 639752 . - . ID=Thaps21210;Parent=Thaps21210;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 636921 639752 . - 0 ID=Thaps21210;Parent=Thaps21210;rank=1 chr2 . exon 636921 639752 . - . ID=Thaps21210.1;Parent=Thaps21210;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 632690 633795 . - . ID=Thaps2287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY1];external_name=Thaps2287;logic_name=jgi_thaps3 chr2 ensembl transcript 632690 633795 . - . ID=Thaps2287;Parent=Thaps2287;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 632690 633270 . - 0 ID=Thaps2287;Parent=Thaps2287;rank=2 chr2 . exon 632690 633270 . - . ID=Thaps2287.2;Parent=Thaps2287;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 633393 633795 . - 0 ID=Thaps2287;Parent=Thaps2287;rank=1 chr2 . exon 633393 633795 . - . ID=Thaps2287.1;Parent=Thaps2287;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 629393 629713 . + . ID=Thaps261298;biotype=protein_coding;description=Pas-domain protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTX9];external_name=Thaps261298;logic_name=jgi_thaps3 chr2 ensembl transcript 629393 629713 . + . ID=Thaps261298;Parent=Thaps261298;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 629393 629563 . + 0 ID=Thaps261298;Parent=Thaps261298;rank=1 chr2 . exon 629393 629563 . + . ID=Thaps261298.1;Parent=Thaps261298;constitutive=1;rank=1 chr2 . CDS 629698 629713 . + 0 ID=Thaps261298;Parent=Thaps261298;rank=2 chr2 . exon 629698 629713 . + . ID=Thaps261298.2;Parent=Thaps261298;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 640130 641962 . - . ID=Thaps21211;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY3];external_name=Thaps21211;logic_name=jgi_thaps3 chr2 ensembl transcript 640130 641962 . - . ID=Thaps21211;Parent=Thaps21211;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 640130 641962 . - 0 ID=Thaps21211;Parent=Thaps21211;rank=1 chr2 . exon 640130 641962 . - . ID=Thaps21211.1;Parent=Thaps21211;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 643322 644496 . + . ID=Thaps2291;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY4];external_name=Thaps2291;logic_name=jgi_thaps3 chr2 ensembl transcript 643322 644496 . + . ID=Thaps2291;Parent=Thaps2291;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 643322 643933 . + 0 ID=Thaps2291;Parent=Thaps2291;rank=1 chr2 . exon 643322 643933 . + . ID=Thaps2291.1;Parent=Thaps2291;constitutive=1;rank=1 chr2 . CDS 644083 644496 . + 0 ID=Thaps2291;Parent=Thaps2291;rank=2 chr2 . exon 644083 644496 . + . ID=Thaps2291.2;Parent=Thaps2291;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 644863 646062 . + . ID=Thaps2292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY5];external_name=Thaps2292;logic_name=jgi_thaps3 chr2 ensembl transcript 644863 646062 . + . ID=Thaps2292;Parent=Thaps2292;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 644863 646062 . + 0 ID=Thaps2292;Parent=Thaps2292;rank=1 chr2 . exon 644863 646062 . + . ID=Thaps2292.1;Parent=Thaps2292;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 646144 646704 . - . ID=Thaps2293;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY6];external_name=Thaps2293;logic_name=jgi_thaps3 chr2 ensembl transcript 646144 646704 . - . ID=Thaps2293;Parent=Thaps2293;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 646144 646704 . - 0 ID=Thaps2293;Parent=Thaps2293;rank=1 chr2 . exon 646144 646704 . - . ID=Thaps2293.1;Parent=Thaps2293;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 647538 648392 . - . ID=Thaps2294;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY7];external_name=Thaps2294;logic_name=jgi_thaps3 chr2 ensembl transcript 647538 648392 . - . ID=Thaps2294;Parent=Thaps2294;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 647538 648392 . - 0 ID=Thaps2294;Parent=Thaps2294;rank=1 chr2 . exon 647538 648392 . - . ID=Thaps2294.1;Parent=Thaps2294;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 648951 649658 . + . ID=Thaps2295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY8];external_name=Thaps2295;logic_name=jgi_thaps3 chr2 ensembl transcript 648951 649658 . + . ID=Thaps2295;Parent=Thaps2295;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 648951 649658 . + 0 ID=Thaps2295;Parent=Thaps2295;rank=1 chr2 . exon 648951 649658 . + . ID=Thaps2295.1;Parent=Thaps2295;constitutive=1;rank=1 chr2 . repeat_region 651381 651395 . ? . description=dust chr2 . biological_region 657205 657206 0.999 + . logic_name=eponine chr2 ensembl protein_coding_gene 651755 653467 . - . ID=Thaps13089;biotype=protein_coding;description=ABC transporter family [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ0];external_name=Thaps13089;logic_name=jgi_thaps3 chr2 ensembl transcript 651755 653467 . - . ID=Thaps13089;Parent=Thaps13089;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 651755 652485 . - 0 ID=Thaps13089;Parent=Thaps13089;rank=2 chr2 . exon 651755 652485 . - . ID=Thaps13089.2;Parent=Thaps13089;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 652588 653467 . - 0 ID=Thaps13089;Parent=Thaps13089;rank=1 chr2 . exon 652588 653467 . - . ID=Thaps13089.1;Parent=Thaps13089;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 655825 656475 . - . ID=Thaps16755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ1];external_name=Thaps16755;logic_name=jgi_thaps3 chr2 ensembl transcript 655825 656475 . - . ID=Thaps16755;Parent=Thaps16755;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 655825 656475 . - 0 ID=Thaps16755;Parent=Thaps16755;rank=1 chr2 . exon 655825 656475 . - . ID=Thaps16755.1;Parent=Thaps16755;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 657645 658661 . + . ID=Thaps21213;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ2];external_name=Thaps21213;logic_name=jgi_thaps3 chr2 ensembl transcript 657645 658661 . + . ID=Thaps21213;Parent=Thaps21213;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 657645 658661 . + 0 ID=Thaps21213;Parent=Thaps21213;rank=1 chr2 . exon 657645 658661 . + . ID=Thaps21213.1;Parent=Thaps21213;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 649840 650908 . - . ID=Thaps32029;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTY9];external_name=Thaps32029;logic_name=jgi_thaps3 chr2 ensembl transcript 649840 650908 . - . ID=Thaps32029;Parent=Thaps32029;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 649840 650682 . - 0 ID=Thaps32029;Parent=Thaps32029;rank=2 chr2 . exon 649840 650682 . - . ID=Thaps32029.2;Parent=Thaps32029;constitutive=1;rank=2 chr2 . CDS 650825 650908 . - 0 ID=Thaps32029;Parent=Thaps32029;rank=1 chr2 . exon 650825 650908 . - . ID=Thaps32029.1;Parent=Thaps32029;constitutive=1;rank=1 chr2 . repeat_region 661552 661589 . ? . description=trf chr2 . repeat_region 664115 664158 . ? . description=trf chr2 . repeat_region 665936 666101 . + . description=scaffold_9_180_2_461971_462498 chr2 . repeat_region 666198 666537 . + . description=scaffold_9_180_2_461971_462498 chr2 ensembl protein_coding_gene 662858 663580 . + . ID=Thaps21216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ5];external_name=Thaps21216;logic_name=jgi_thaps3 chr2 ensembl transcript 662858 663580 . + . ID=Thaps21216;Parent=Thaps21216;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 662858 663580 . + 0 ID=Thaps21216;Parent=Thaps21216;rank=1 chr2 . exon 662858 663580 . + . ID=Thaps21216.1;Parent=Thaps21216;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 661692 662162 . - . ID=Thaps2301;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ4];external_name=Thaps2301;logic_name=jgi_thaps3 chr2 ensembl transcript 661692 662162 . - . ID=Thaps2301;Parent=Thaps2301;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 661692 662162 . - 0 ID=Thaps2301;Parent=Thaps2301;rank=1 chr2 . exon 661692 662162 . - . ID=Thaps2301.1;Parent=Thaps2301;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 663660 664673 . - . ID=Thaps2303;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ6];external_name=Thaps2303;logic_name=jgi_thaps3 chr2 ensembl transcript 663660 664673 . - . ID=Thaps2303;Parent=Thaps2303;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 663660 664673 . - 0 ID=Thaps2303;Parent=Thaps2303;rank=1 chr2 . exon 663660 664673 . - . ID=Thaps2303.1;Parent=Thaps2303;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 667274 672811 . - . ID=Thaps268226;biotype=protein_coding;description=Ammonium transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ7];external_name=AMT4;logic_name=jgi_thaps3 chr2 ensembl transcript 667274 672811 . - . ID=Thaps268226;Parent=Thaps268226;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 667274 667818 . - 0 ID=Thaps268226;Parent=Thaps268226;rank=4 chr2 . exon 667274 667818 . - . ID=Thaps268226.4;Parent=Thaps268226;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 667884 668135 . - 0 ID=Thaps268226;Parent=Thaps268226;rank=3 chr2 . exon 667884 668135 . - . ID=Thaps268226.3;Parent=Thaps268226;constitutive=1;rank=3 chr2 . CDS 668224 668802 . - 0 ID=Thaps268226;Parent=Thaps268226;rank=2 chr2 . exon 668224 668802 . - . ID=Thaps268226.2;Parent=Thaps268226;constitutive=1;rank=2 chr2 . CDS 672805 672811 . - 0 ID=Thaps268226;Parent=Thaps268226;rank=1 chr2 ensembl protein_coding_gene 660539 661358 . - . ID=Thaps31809;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ3];external_name=Thaps31809;logic_name=jgi_thaps3 chr2 ensembl transcript 660539 661358 . - . ID=Thaps31809;Parent=Thaps31809;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 660539 661201 . - 0 ID=Thaps31809;Parent=Thaps31809;rank=2 chr2 . exon 660539 661201 . - . ID=Thaps31809.2;Parent=Thaps31809;constitutive=1;rank=2 chr2 . CDS 661338 661358 . - 0 ID=Thaps31809;Parent=Thaps31809;rank=1 chr2 . exon 661338 661358 . - . ID=Thaps31809.1;Parent=Thaps31809;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 673609 677363 . - . ID=Thaps21220;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ8];external_name=Thaps21220;logic_name=jgi_thaps3 chr2 ensembl transcript 673609 677363 . - . ID=Thaps21220;Parent=Thaps21220;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 673609 674411 . - 0 ID=Thaps21220;Parent=Thaps21220;rank=4 chr2 . exon 673609 674411 . - . ID=Thaps21220.4;Parent=Thaps21220;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 674613 674753 . - 0 ID=Thaps21220;Parent=Thaps21220;rank=3 chr2 . exon 674613 674753 . - . ID=Thaps21220.3;Parent=Thaps21220;constitutive=1;rank=3 chr2 . CDS 675260 676237 . - 0 ID=Thaps21220;Parent=Thaps21220;rank=2 chr2 . exon 675260 676237 . - . ID=Thaps21220.2;Parent=Thaps21220;constitutive=1;rank=2 chr2 . CDS 676274 677363 . - 0 ID=Thaps21220;Parent=Thaps21220;rank=1 chr2 . exon 676274 677363 . - . ID=Thaps21220.1;Parent=Thaps21220;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 672805 672811 . - . ID=Thaps268226.1;Parent=Thaps268226;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 677586 678795 . - . ID=Thaps32226;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BTZ9];external_name=Thaps32226;logic_name=jgi_thaps3 chr2 ensembl transcript 677586 678795 . - . ID=Thaps32226;Parent=Thaps32226;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 677586 678053 . - 0 ID=Thaps32226;Parent=Thaps32226;rank=3 chr2 . exon 677586 678053 . - . ID=Thaps32226.3;Parent=Thaps32226;constitutive=1;rank=3 chr2 . CDS 678159 678256 . - 0 ID=Thaps32226;Parent=Thaps32226;rank=2 chr2 . exon 678159 678256 . - . ID=Thaps32226.2;Parent=Thaps32226;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 678339 678795 . - 0 ID=Thaps32226;Parent=Thaps32226;rank=1 chr2 . exon 678339 678795 . - . ID=Thaps32226.1;Parent=Thaps32226;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 680180 680210 . ? . description=trf chr2 . repeat_region 684194 684233 . ? . description=trf chr2 . repeat_region 685913 685920 . ? . description=dust chr2 ensembl protein_coding_gene 688381 690644 . + . ID=Thaps21222;biotype=protein_coding;description=Atp-dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BU04];external_name=Thaps21222;logic_name=jgi_thaps3 chr2 ensembl transcript 688381 690644 . + . ID=Thaps21222;Parent=Thaps21222;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 688381 688426 . + 0 ID=Thaps21222;Parent=Thaps21222;rank=1 chr2 . exon 688381 688426 . + . ID=Thaps21222.1;Parent=Thaps21222;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 688453 690644 . + 0 ID=Thaps21222;Parent=Thaps21222;rank=2 chr2 . exon 688453 690644 . + . ID=Thaps21222.2;Parent=Thaps21222;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 680718 681557 . - . ID=Thaps2309;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU00];external_name=Thaps2309;logic_name=jgi_thaps3 chr2 ensembl transcript 680718 681557 . - . ID=Thaps2309;Parent=Thaps2309;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 680718 681557 . - 0 ID=Thaps2309;Parent=Thaps2309;rank=1 chr2 . exon 680718 681557 . - . ID=Thaps2309.1;Parent=Thaps2309;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 681991 683919 . + . ID=Thaps2310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU01];external_name=Thaps2310;logic_name=jgi_thaps3 chr2 ensembl transcript 681991 683919 . + . ID=Thaps2310;Parent=Thaps2310;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 681991 682165 . + 0 ID=Thaps2310;Parent=Thaps2310;rank=1 chr2 . exon 681991 682165 . + . ID=Thaps2310.1;Parent=Thaps2310;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 682288 683159 . + 0 ID=Thaps2310;Parent=Thaps2310;rank=2 chr2 . exon 682288 683159 . + . ID=Thaps2310.2;Parent=Thaps2310;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 683259 683291 . + 0 ID=Thaps2310;Parent=Thaps2310;rank=3 chr2 . exon 683259 683291 . + . ID=Thaps2310.3;Parent=Thaps2310;constitutive=1;rank=3 chr2 . CDS 683383 683919 . + 0 ID=Thaps2310;Parent=Thaps2310;rank=4 chr2 . exon 683383 683919 . + . ID=Thaps2310.4;Parent=Thaps2310;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 684159 685725 . - . ID=Thaps2311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU02];external_name=Thaps2311;logic_name=jgi_thaps3 chr2 ensembl transcript 684159 685725 . - . ID=Thaps2311;Parent=Thaps2311;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 684159 685260 . - 0 ID=Thaps2311;Parent=Thaps2311;rank=2 chr2 . exon 684159 685260 . - . ID=Thaps2311.2;Parent=Thaps2311;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 685403 685725 . - 0 ID=Thaps2311;Parent=Thaps2311;rank=1 chr2 . exon 685403 685725 . - . ID=Thaps2311.1;Parent=Thaps2311;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 686145 686945 . + . ID=Thaps2312;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU03];external_name=Thaps2312;logic_name=jgi_thaps3 chr2 ensembl transcript 686145 686945 . + . ID=Thaps2312;Parent=Thaps2312;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 686145 686945 . + 0 ID=Thaps2312;Parent=Thaps2312;rank=1 chr2 . exon 686145 686945 . + . ID=Thaps2312.1;Parent=Thaps2312;constitutive=1;rank=1 chr2 . repeat_region 696706 696788 . - . description=TE2c_TP chr2 ensembl protein_coding_gene 692288 695456 . + . ID=Thaps21223;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU06];external_name=Thaps21223;logic_name=jgi_thaps3 chr2 ensembl transcript 692288 695456 . + . ID=Thaps21223;Parent=Thaps21223;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 692288 692349 . + 0 ID=Thaps21223;Parent=Thaps21223;rank=1 chr2 . exon 692288 692349 . + . ID=Thaps21223.1;Parent=Thaps21223;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 692525 695456 . + 0 ID=Thaps21223;Parent=Thaps21223;rank=2 chr2 . exon 692525 695456 . + . ID=Thaps21223.2;Parent=Thaps21223;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 690789 692096 . - . ID=Thaps2314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU05];external_name=Thaps2314;logic_name=jgi_thaps3 chr2 ensembl transcript 690789 692096 . - . ID=Thaps2314;Parent=Thaps2314;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 690789 692096 . - 0 ID=Thaps2314;Parent=Thaps2314;rank=1 chr2 . exon 690789 692096 . - . ID=Thaps2314.1;Parent=Thaps2314;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 697074 699049 . - . ID=Thaps31928;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BU07];external_name=Thaps31928;logic_name=jgi_thaps3 chr2 ensembl transcript 697074 699049 . - . ID=Thaps31928;Parent=Thaps31928;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 697074 697324 . - 0 ID=Thaps31928;Parent=Thaps31928;rank=4 chr2 . exon 697074 697324 . - . ID=Thaps31928.4;Parent=Thaps31928;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 697418 697501 . - 0 ID=Thaps31928;Parent=Thaps31928;rank=3 chr2 . exon 697418 697501 . - . ID=Thaps31928.3;Parent=Thaps31928;constitutive=1;rank=3 chr2 . CDS 697588 697954 . - 0 ID=Thaps31928;Parent=Thaps31928;rank=2 chr2 . exon 697588 697954 . - . ID=Thaps31928.2;Parent=Thaps31928;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 698168 699049 . - 0 ID=Thaps31928;Parent=Thaps31928;rank=1 chr2 . exon 698168 699049 . - . ID=Thaps31928.1;Parent=Thaps31928;constitutive=1;rank=1 chr2 . repeat_region 704854 705009 . - . description=Gypsy1ALTR_TP chr2 . repeat_region 705010 705161 . - . description=Gypsy1I_TP chr2 . repeat_region 705161 705992 . - . description=TE2b_TP chr2 . repeat_region 705554 705626 . ? . description=trf chr2 . repeat_region 705559 705632 . ? . description=trf chr2 . repeat_region 705584 705646 . ? . description=trf chr2 . repeat_region 705930 705969 . ? . description=trf chr2 . repeat_region 705989 706203 . - . description=Gypsy1I_TP chr2 . repeat_region 706204 706212 . ? . description=dust chr2 . repeat_region 706222 709951 . - . description=Gypsy1I_TP chr2 . repeat_region 707740 707794 . ? . description=trf chr2 ensembl protein_coding_gene 699756 700789 . + . ID=Thaps2317;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU08];external_name=Thaps2317;logic_name=jgi_thaps3 chr2 ensembl transcript 699756 700789 . + . ID=Thaps2317;Parent=Thaps2317;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 699756 700185 . + 0 ID=Thaps2317;Parent=Thaps2317;rank=1 chr2 . exon 699756 700185 . + . ID=Thaps2317.1;Parent=Thaps2317;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 700266 700789 . + 0 ID=Thaps2317;Parent=Thaps2317;rank=2 chr2 . exon 700266 700789 . + . ID=Thaps2317.2;Parent=Thaps2317;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 700834 702242 . - . ID=Thaps2318;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU09];external_name=Thaps2318;logic_name=jgi_thaps3 chr2 ensembl transcript 700834 702242 . - . ID=Thaps2318;Parent=Thaps2318;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 700834 701454 . - 0 ID=Thaps2318;Parent=Thaps2318;rank=2 chr2 . exon 700834 701454 . - . ID=Thaps2318.2;Parent=Thaps2318;constitutive=1;rank=2 chr2 . CDS 701529 702242 . - 0 ID=Thaps2318;Parent=Thaps2318;rank=1 chr2 . exon 701529 702242 . - . ID=Thaps2318.1;Parent=Thaps2318;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 703591 704620 . - . ID=Thaps2319;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU10];external_name=Thaps2319;logic_name=jgi_thaps3 chr2 ensembl transcript 703591 704620 . - . ID=Thaps2319;Parent=Thaps2319;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 703591 703907 . - 0 ID=Thaps2319;Parent=Thaps2319;rank=4 chr2 . exon 703591 703907 . - . ID=Thaps2319.4;Parent=Thaps2319;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 703990 704091 . - 0 ID=Thaps2319;Parent=Thaps2319;rank=3 chr2 . exon 703990 704091 . - . ID=Thaps2319.3;Parent=Thaps2319;constitutive=1;rank=3 chr2 . CDS 704330 704423 . - 0 ID=Thaps2319;Parent=Thaps2319;rank=2 chr2 . exon 704330 704423 . - . ID=Thaps2319.2;Parent=Thaps2319;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 704555 704620 . - 0 ID=Thaps2319;Parent=Thaps2319;rank=1 chr2 . exon 704555 704620 . - . ID=Thaps2319.1;Parent=Thaps2319;constitutive=1;rank=1 chr2 ensembl gene 706716 707325 . - . ID=Thaps261307;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr2 ensembl transcript 706716 707325 . - . ID=Thaps261307;Parent=Thaps261307;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr2 . exon 706716 707325 . - . ID=Thaps261307.1;Parent=Thaps261307;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 710162 710515 . - . description=Harbinger4_TP chr2 . repeat_region 710669 710802 . + . description=Gypsy1LTR_TP chr2 ensembl protein_coding_gene 717421 718253 . + . ID=Thaps21224;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU14];external_name=Thaps21224;logic_name=jgi_thaps3 chr2 ensembl transcript 717421 718253 . + . ID=Thaps21224;Parent=Thaps21224;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 717421 717825 . + 0 ID=Thaps21224;Parent=Thaps21224;rank=1 chr2 . exon 717421 717825 . + . ID=Thaps21224.1;Parent=Thaps21224;constitutive=1;rank=1 chr2 . CDS 717930 718253 . + 0 ID=Thaps21224;Parent=Thaps21224;rank=2 chr2 . exon 717930 718253 . + . ID=Thaps21224.2;Parent=Thaps21224;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 711506 712018 . - . ID=Thaps2320;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU11];external_name=Thaps2320;logic_name=jgi_thaps3 chr2 ensembl transcript 711506 712018 . - . ID=Thaps2320;Parent=Thaps2320;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 711506 712018 . - 0 ID=Thaps2320;Parent=Thaps2320;rank=1 chr2 . exon 711506 712018 . - . ID=Thaps2320.1;Parent=Thaps2320;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 713425 715656 . + . ID=Thaps2321;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU12];external_name=Thaps2321;logic_name=jgi_thaps3 chr2 ensembl transcript 713425 715656 . + . ID=Thaps2321;Parent=Thaps2321;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 713425 715656 . + 0 ID=Thaps2321;Parent=Thaps2321;rank=1 chr2 . exon 713425 715656 . + . ID=Thaps2321.1;Parent=Thaps2321;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 715732 716502 . - . ID=Thaps2322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU13];external_name=Thaps2322;logic_name=jgi_thaps3 chr2 ensembl transcript 715732 716502 . - . ID=Thaps2322;Parent=Thaps2322;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 715732 716502 . - 0 ID=Thaps2322;Parent=Thaps2322;rank=1 chr2 . exon 715732 716502 . - . ID=Thaps2322.1;Parent=Thaps2322;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 718644 720035 . - . ID=Thaps268228;biotype=protein_coding;description=Transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BU15];external_name=Thaps268228;logic_name=jgi_thaps3 chr2 ensembl transcript 718644 720035 . - . ID=Thaps268228;Parent=Thaps268228;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 718644 719781 . - 0 ID=Thaps268228;Parent=Thaps268228;rank=3 chr2 . exon 718644 719781 . - . ID=Thaps268228.3;Parent=Thaps268228;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 719803 719857 . - 0 ID=Thaps268228;Parent=Thaps268228;rank=2 chr2 . CDS 719960 720035 . - 0 ID=Thaps268228;Parent=Thaps268228;rank=1 chr2 . repeat_region 727213 727249 . ? . description=trf chr2 . repeat_region 727217 727249 . ? . description=dust chr2 ensembl protein_coding_gene 728993 729919 . - . ID=Thaps21227;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU20];external_name=Thaps21227;logic_name=jgi_thaps3 chr2 ensembl transcript 728993 729919 . - . ID=Thaps21227;Parent=Thaps21227;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 728993 729919 . - 0 ID=Thaps21227;Parent=Thaps21227;rank=1 chr2 . exon 728993 729919 . - . ID=Thaps21227.1;Parent=Thaps21227;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 720325 721278 . + . ID=Thaps2325;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU16];external_name=Thaps2325;logic_name=jgi_thaps3 chr2 ensembl transcript 720325 721278 . + . ID=Thaps2325;Parent=Thaps2325;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 720325 721278 . + 0 ID=Thaps2325;Parent=Thaps2325;rank=1 chr2 . exon 720325 721278 . + . ID=Thaps2325.1;Parent=Thaps2325;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 723491 725887 . + . ID=Thaps2327;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU18];external_name=Thaps2327;logic_name=jgi_thaps3 chr2 ensembl transcript 723491 725887 . + . ID=Thaps2327;Parent=Thaps2327;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 723491 725887 . + 0 ID=Thaps2327;Parent=Thaps2327;rank=1 chr2 . exon 723491 725887 . + . ID=Thaps2327.1;Parent=Thaps2327;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 726100 728589 . - . ID=Thaps2328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU19];external_name=Thaps2328;logic_name=jgi_thaps3 chr2 ensembl transcript 726100 728589 . - . ID=Thaps2328;Parent=Thaps2328;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 726100 727194 . - 0 ID=Thaps2328;Parent=Thaps2328;rank=4 chr2 . exon 726100 727194 . - . ID=Thaps2328.4;Parent=Thaps2328;constitutive=1;rank=4 chr2 . CDS 727314 727547 . - 0 ID=Thaps2328;Parent=Thaps2328;rank=3 chr2 . exon 727314 727547 . - . ID=Thaps2328.3;Parent=Thaps2328;constitutive=1;rank=3 chr2 . CDS 727581 728444 . - 0 ID=Thaps2328;Parent=Thaps2328;rank=2 chr2 . exon 727581 728444 . - . ID=Thaps2328.2;Parent=Thaps2328;constitutive=1;rank=2 chr2 . CDS 728587 728589 . - 0 ID=Thaps2328;Parent=Thaps2328;rank=1 chr2 . exon 728587 728589 . - . ID=Thaps2328.1;Parent=Thaps2328;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 721397 723205 . - . ID=Thaps261310;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU17];external_name=Thaps261310;logic_name=jgi_thaps3 chr2 ensembl transcript 721397 723205 . - . ID=Thaps261310;Parent=Thaps261310;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 721397 721855 . - 0 ID=Thaps261310;Parent=Thaps261310;rank=5 chr2 . exon 721397 721855 . - . ID=Thaps261310.5;Parent=Thaps261310;constitutive=1;rank=5 chr2 . CDS 721886 721953 . - 0 ID=Thaps261310;Parent=Thaps261310;rank=4 chr2 . exon 721886 721953 . - . ID=Thaps261310.4;Parent=Thaps261310;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 722044 722269 . - 0 ID=Thaps261310;Parent=Thaps261310;rank=3 chr2 . exon 722044 722269 . - . ID=Thaps261310.3;Parent=Thaps261310;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 722315 722835 . - 0 ID=Thaps261310;Parent=Thaps261310;rank=2 chr2 . exon 722315 722835 . - . ID=Thaps261310.2;Parent=Thaps261310;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 722953 723205 . - 0 ID=Thaps261310;Parent=Thaps261310;rank=1 chr2 . exon 722953 723205 . - . ID=Thaps261310.1;Parent=Thaps261310;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 719803 719857 . - . ID=Thaps268228.2;Parent=Thaps268228;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . exon 719960 720035 . - . ID=Thaps268228.1;Parent=Thaps268228;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 732060 734298 . - . ID=Thaps2331;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU22];external_name=Thaps2331;logic_name=jgi_thaps3 chr2 ensembl transcript 732060 734298 . - . ID=Thaps2331;Parent=Thaps2331;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 732060 732274 . - 0 ID=Thaps2331;Parent=Thaps2331;rank=3 chr2 . exon 732060 732274 . - . ID=Thaps2331.3;Parent=Thaps2331;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 732360 732660 . - 0 ID=Thaps2331;Parent=Thaps2331;rank=2 chr2 . exon 732360 732660 . - . ID=Thaps2331.2;Parent=Thaps2331;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 732745 734298 . - 0 ID=Thaps2331;Parent=Thaps2331;rank=1 chr2 . exon 732745 734298 . - . ID=Thaps2331.1;Parent=Thaps2331;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 734515 735821 . + . ID=Thaps2332;biotype=protein_coding;description=O-sialoglycoprotein endopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8BU23];external_name=Thaps2332;logic_name=jgi_thaps3 chr2 ensembl transcript 734515 735821 . + . ID=Thaps2332;Parent=Thaps2332;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 734515 734864 . + 0 ID=Thaps2332;Parent=Thaps2332;rank=1 chr2 . exon 734515 734864 . + . ID=Thaps2332.1;Parent=Thaps2332;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 734948 735821 . + 0 ID=Thaps2332;Parent=Thaps2332;rank=2 chr2 . exon 734948 735821 . + . ID=Thaps2332.2;Parent=Thaps2332;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 735911 738781 . - . ID=Thaps2333;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU24];external_name=Thaps2333;logic_name=jgi_thaps3 chr2 ensembl transcript 735911 738781 . - . ID=Thaps2333;Parent=Thaps2333;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 735911 738781 . - 0 ID=Thaps2333;Parent=Thaps2333;rank=1 chr2 . exon 735911 738781 . - . ID=Thaps2333.1;Parent=Thaps2333;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 730119 731953 . + . ID=Thaps261312;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU21];external_name=Thaps261312;logic_name=jgi_thaps3 chr2 ensembl transcript 730119 731953 . + . ID=Thaps261312;Parent=Thaps261312;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 730119 730429 . + 0 ID=Thaps261312;Parent=Thaps261312;rank=1 chr2 . exon 730119 730429 . + . ID=Thaps261312.1;Parent=Thaps261312;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 730511 731030 . + 0 ID=Thaps261312;Parent=Thaps261312;rank=2 chr2 . exon 730511 731030 . + . ID=Thaps261312.2;Parent=Thaps261312;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 731256 731953 . + 0 ID=Thaps261312;Parent=Thaps261312;rank=3 chr2 . exon 731256 731953 . + . ID=Thaps261312.3;Parent=Thaps261312;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . repeat_region 740307 740327 . ? . description=dust chr2 ensembl protein_coding_gene 740820 744625 . + . ID=Thaps2335;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU26];external_name=Thaps2335;logic_name=jgi_thaps3 chr2 ensembl transcript 740820 744625 . + . ID=Thaps2335;Parent=Thaps2335;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 740820 741905 . + 0 ID=Thaps2335;Parent=Thaps2335;rank=1 chr2 . exon 740820 741905 . + . ID=Thaps2335.1;Parent=Thaps2335;constitutive=1;rank=1 chr2 . CDS 741989 742759 . + 0 ID=Thaps2335;Parent=Thaps2335;rank=2 chr2 . exon 741989 742759 . + . ID=Thaps2335.2;Parent=Thaps2335;constitutive=1;rank=2 chr2 . CDS 742868 743806 . + 0 ID=Thaps2335;Parent=Thaps2335;rank=3 chr2 . exon 742868 743806 . + . ID=Thaps2335.3;Parent=Thaps2335;constitutive=1;rank=3 chr2 . CDS 743897 744625 . + 0 ID=Thaps2335;Parent=Thaps2335;rank=4 chr2 . exon 743897 744625 . + . ID=Thaps2335.4;Parent=Thaps2335;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 746867 750500 . + . ID=Thaps268232;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU27];external_name=Thaps268232;logic_name=jgi_thaps3 chr2 ensembl transcript 746867 750500 . + . ID=Thaps268232;Parent=Thaps268232;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 746867 746948 . + 0 ID=Thaps268232;Parent=Thaps268232;rank=1 chr2 . exon 746867 746948 . + . ID=Thaps268232.1;Parent=Thaps268232;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 747040 748293 . + 0 ID=Thaps268232;Parent=Thaps268232;rank=2 chr2 . exon 747040 748293 . + . ID=Thaps268232.2;Parent=Thaps268232;constitutive=1;rank=2 chr2 . CDS 748379 748500 . + 0 ID=Thaps268232;Parent=Thaps268232;rank=3 chr2 . exon 748379 748500 . + . ID=Thaps268232.3;Parent=Thaps268232;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 748583 749003 . + 0 ID=Thaps268232;Parent=Thaps268232;rank=4 chr2 . exon 748583 749003 . + . ID=Thaps268232.4;Parent=Thaps268232;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 749088 749221 . + 0 ID=Thaps268232;Parent=Thaps268232;rank=5 chr2 . exon 749088 749221 . + . ID=Thaps268232.5;Parent=Thaps268232;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 749306 749494 . + 0 ID=Thaps268232;Parent=Thaps268232;rank=6 chr2 . CDS 749572 749631 . + 0 ID=Thaps268232;Parent=Thaps268232;rank=7 chr2 . CDS 749740 749969 . + 0 ID=Thaps268232;Parent=Thaps268232;rank=8 chr2 . CDS 750056 750500 . + 0 ID=Thaps268232;Parent=Thaps268232;rank=9 chr2 ensembl protein_coding_gene 739593 739949 . + . ID=Thaps32261;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU25];external_name=Thaps32261;logic_name=jgi_thaps3 chr2 ensembl transcript 739593 739949 . + . ID=Thaps32261;Parent=Thaps32261;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 739593 739949 . + 0 ID=Thaps32261;Parent=Thaps32261;rank=1 chr2 . exon 739593 739949 . + . ID=Thaps32261.1;Parent=Thaps32261;constitutive=1;rank=1 chr2 . repeat_region 751789 751813 . ? . description=trf chr2 ensembl protein_coding_gene 750712 752042 . + . ID=Thaps21229;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU28];external_name=Thaps21229;logic_name=jgi_thaps3 chr2 ensembl transcript 750712 752042 . + . ID=Thaps21229;Parent=Thaps21229;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 750712 750966 . + 0 ID=Thaps21229;Parent=Thaps21229;rank=1 chr2 . exon 750712 750966 . + . ID=Thaps21229.1;Parent=Thaps21229;constitutive=1;rank=1 chr2 . CDS 751089 752042 . + 0 ID=Thaps21229;Parent=Thaps21229;rank=2 chr2 . exon 751089 752042 . + . ID=Thaps21229.2;Parent=Thaps21229;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 758305 759252 . + . ID=Thaps261320;biotype=protein_coding;description=Glucokinase [Source:UniProtKB/TrEMBL%3BAcc:B8BU30];external_name=GLK1;logic_name=jgi_thaps3 chr2 ensembl transcript 758305 759252 . + . ID=Thaps261320;Parent=Thaps261320;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 758305 758650 . + 0 ID=Thaps261320;Parent=Thaps261320;rank=1 chr2 . exon 758305 758650 . + . ID=Thaps261320.1;Parent=Thaps261320;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 758739 759252 . + 0 ID=Thaps261320;Parent=Thaps261320;rank=2 chr2 . exon 758739 759252 . + . ID=Thaps261320.2;Parent=Thaps261320;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . exon 749306 749494 . + . ID=Thaps268232.6;Parent=Thaps268232;constitutive=1;rank=6 chr2 . exon 749572 749631 . + . ID=Thaps268232.7;Parent=Thaps268232;constitutive=1;rank=7 chr2 . exon 749740 749969 . + . ID=Thaps268232.8;Parent=Thaps268232;constitutive=1;ensembl_end_phase=2;rank=8 chr2 . exon 750056 750500 . + . ID=Thaps268232.9;Parent=Thaps268232;constitutive=1;ensembl_end_phase=1;rank=9 chr2 ensembl protein_coding_gene 752649 756373 . - . ID=Thaps268234;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU29];external_name=Thaps268234;logic_name=jgi_thaps3 chr2 ensembl transcript 752649 756373 . - . ID=Thaps268234;Parent=Thaps268234;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 752649 754177 . - 0 ID=Thaps268234;Parent=Thaps268234;rank=3 chr2 . exon 752649 754177 . - . ID=Thaps268234.3;Parent=Thaps268234;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 754264 755529 . - 0 ID=Thaps268234;Parent=Thaps268234;rank=2 chr2 . exon 754264 755529 . - . ID=Thaps268234.2;Parent=Thaps268234;constitutive=1;rank=2 chr2 . CDS 755617 756373 . - 0 ID=Thaps268234;Parent=Thaps268234;rank=1 chr2 . exon 755617 756373 . - . ID=Thaps268234.1;Parent=Thaps268234;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 759530 759543 . ? . description=dust chr2 . repeat_region 767994 768032 . ? . description=dust chr2 ensembl protein_coding_gene 763944 765003 . - . ID=Thaps2343;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU34];external_name=Thaps2343;logic_name=jgi_thaps3 chr2 ensembl transcript 763944 765003 . - . ID=Thaps2343;Parent=Thaps2343;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 763944 764011 . - 0 ID=Thaps2343;Parent=Thaps2343;rank=3 chr2 . exon 763944 764011 . - . ID=Thaps2343.3;Parent=Thaps2343;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 764118 764786 . - 0 ID=Thaps2343;Parent=Thaps2343;rank=2 chr2 . exon 764118 764786 . - . ID=Thaps2343.2;Parent=Thaps2343;constitutive=1;rank=2 chr2 . CDS 764919 765003 . - 0 ID=Thaps2343;Parent=Thaps2343;rank=1 chr2 . exon 764919 765003 . - . ID=Thaps2343.1;Parent=Thaps2343;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 765698 766267 . + . ID=Thaps2344;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU35];external_name=Thaps2344;logic_name=jgi_thaps3 chr2 ensembl transcript 765698 766267 . + . ID=Thaps2344;Parent=Thaps2344;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 765698 766267 . + 0 ID=Thaps2344;Parent=Thaps2344;rank=1 chr2 . exon 765698 766267 . + . ID=Thaps2344.1;Parent=Thaps2344;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 766570 767583 . - . ID=Thaps2345;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU36];external_name=Thaps2345;logic_name=jgi_thaps3 chr2 ensembl transcript 766570 767583 . - . ID=Thaps2345;Parent=Thaps2345;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 766570 767583 . - 0 ID=Thaps2345;Parent=Thaps2345;rank=1 chr2 . exon 766570 767583 . - . ID=Thaps2345.1;Parent=Thaps2345;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 769000 771964 . - . ID=Thaps261324;biotype=protein_coding;description=Molybdenum cofactor sulfurase protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU37];external_name=Thaps261324;logic_name=jgi_thaps3 chr2 ensembl transcript 769000 771964 . - . ID=Thaps261324;Parent=Thaps261324;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 769000 770291 . - 0 ID=Thaps261324;Parent=Thaps261324;rank=9 chr2 . exon 769000 770291 . - . ID=Thaps261324.9;Parent=Thaps261324;constitutive=1;ensembl_end_phase=2;rank=9 chr2 . CDS 770328 770421 . - 0 ID=Thaps261324;Parent=Thaps261324;rank=8 chr2 . CDS 770501 770550 . - 0 ID=Thaps261324;Parent=Thaps261324;rank=7 chr2 . CDS 770590 770747 . - 0 ID=Thaps261324;Parent=Thaps261324;rank=6 chr2 . CDS 770814 770971 . - 0 ID=Thaps261324;Parent=Thaps261324;rank=5 chr2 . CDS 771071 771285 . - 0 ID=Thaps261324;Parent=Thaps261324;rank=4 chr2 . CDS 771388 771483 . - 0 ID=Thaps261324;Parent=Thaps261324;rank=3 chr2 . CDS 771598 771658 . - 0 ID=Thaps261324;Parent=Thaps261324;rank=2 chr2 . CDS 771731 771964 . - 0 ID=Thaps261324;Parent=Thaps261324;rank=1 chr2 ensembl protein_coding_gene 762792 763349 . + . ID=Thaps31749;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c light-harvesting protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU33];external_name=LHCR11;logic_name=jgi_thaps3 chr2 ensembl transcript 762792 763349 . + . ID=Thaps31749;Parent=Thaps31749;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 762792 763349 . + 0 ID=Thaps31749;Parent=Thaps31749;rank=1 chr2 . exon 762792 763349 . + . ID=Thaps31749.1;Parent=Thaps31749;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 761679 762269 . - . ID=Thaps31983;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU32];external_name=LHCR12;logic_name=jgi_thaps3 chr2 ensembl transcript 761679 762269 . - . ID=Thaps31983;Parent=Thaps31983;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 761679 762269 . - 0 ID=Thaps31983;Parent=Thaps31983;rank=1 chr2 . exon 761679 762269 . - . ID=Thaps31983.1;Parent=Thaps31983;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 759751 760401 . - . ID=Thaps39470;biotype=protein_coding;description=Ran-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU31];external_name=Thaps39470;logic_name=jgi_thaps3 chr2 ensembl transcript 759751 760401 . - . ID=Thaps39470;Parent=Thaps39470;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 759751 760401 . - 0 ID=Thaps39470;Parent=Thaps39470;rank=1 chr2 . exon 759751 760401 . - . ID=Thaps39470.1;Parent=Thaps39470;constitutive=1;rank=1 chr2 . exon 770328 770421 . - . ID=Thaps261324.8;Parent=Thaps261324;constitutive=1;ensembl_end_phase=1;rank=8 chr2 . exon 770501 770550 . - . ID=Thaps261324.7;Parent=Thaps261324;constitutive=1;ensembl_end_phase=2;rank=7 chr2 . exon 770590 770747 . - . ID=Thaps261324.6;Parent=Thaps261324;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . exon 770814 770971 . - . ID=Thaps261324.5;Parent=Thaps261324;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . exon 771071 771285 . - . ID=Thaps261324.4;Parent=Thaps261324;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . exon 771388 771483 . - . ID=Thaps261324.3;Parent=Thaps261324;constitutive=1;rank=3 chr2 . exon 771598 771658 . - . ID=Thaps261324.2;Parent=Thaps261324;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . exon 771731 771964 . - . ID=Thaps261324.1;Parent=Thaps261324;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 775585 777249 . - . ID=Thaps261325;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU38];external_name=Thaps261325;logic_name=jgi_thaps3 chr2 ensembl transcript 775585 777249 . - . ID=Thaps261325;Parent=Thaps261325;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 775585 775905 . - 0 ID=Thaps261325;Parent=Thaps261325;rank=4 chr2 . exon 775585 775905 . - . ID=Thaps261325.4;Parent=Thaps261325;constitutive=1;rank=4 chr2 . CDS 776035 776315 . - 0 ID=Thaps261325;Parent=Thaps261325;rank=3 chr2 . exon 776035 776315 . - . ID=Thaps261325.3;Parent=Thaps261325;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 776559 776751 . - 0 ID=Thaps261325;Parent=Thaps261325;rank=2 chr2 . exon 776559 776751 . - . ID=Thaps261325.2;Parent=Thaps261325;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 776884 777249 . - 0 ID=Thaps261325;Parent=Thaps261325;rank=1 chr2 . exon 776884 777249 . - . ID=Thaps261325.1;Parent=Thaps261325;constitutive=1;rank=1 chr2 . repeat_region 787633 787672 . ? . description=dust chr2 . repeat_region 787835 787864 . ? . description=dust chr2 ensembl protein_coding_gene 785307 786656 . + . ID=Thaps21233;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU39];external_name=Thaps21233;logic_name=jgi_thaps3 chr2 ensembl transcript 785307 786656 . + . ID=Thaps21233;Parent=Thaps21233;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 785307 786143 . + 0 ID=Thaps21233;Parent=Thaps21233;rank=1 chr2 . exon 785307 786143 . + . ID=Thaps21233.1;Parent=Thaps21233;constitutive=1;rank=1 chr2 . CDS 786258 786656 . + 0 ID=Thaps21233;Parent=Thaps21233;rank=2 chr2 . exon 786258 786656 . + . ID=Thaps21233.2;Parent=Thaps21233;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 787289 788980 . + . ID=Thaps21234;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU40];external_name=Thaps21234;logic_name=jgi_thaps3 chr2 ensembl transcript 787289 788980 . + . ID=Thaps21234;Parent=Thaps21234;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 787289 788980 . + 0 ID=Thaps21234;Parent=Thaps21234;rank=1 chr2 . exon 787289 788980 . + . ID=Thaps21234.1;Parent=Thaps21234;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 793081 794694 . + . ID=Thaps21235;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU42];external_name=Thaps21235;logic_name=jgi_thaps3 chr2 ensembl transcript 793081 794694 . + . ID=Thaps21235;Parent=Thaps21235;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 793081 793138 . + 0 ID=Thaps21235;Parent=Thaps21235;rank=1 chr2 . exon 793081 793138 . + . ID=Thaps21235.1;Parent=Thaps21235;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 793442 793512 . + 0 ID=Thaps21235;Parent=Thaps21235;rank=2 chr2 . exon 793442 793512 . + . ID=Thaps21235.2;Parent=Thaps21235;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 793627 794694 . + 0 ID=Thaps21235;Parent=Thaps21235;rank=3 chr2 . exon 793627 794694 . + . ID=Thaps21235.3;Parent=Thaps21235;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 789554 790617 . - . ID=Thaps2350;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU41];external_name=Thaps2350;logic_name=jgi_thaps3 chr2 ensembl transcript 789554 790617 . - . ID=Thaps2350;Parent=Thaps2350;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 789554 790009 . - 0 ID=Thaps2350;Parent=Thaps2350;rank=2 chr2 . exon 789554 790009 . - . ID=Thaps2350.2;Parent=Thaps2350;constitutive=1;rank=2 chr2 . CDS 790123 790617 . - 0 ID=Thaps2350;Parent=Thaps2350;rank=1 chr2 . exon 790123 790617 . - . ID=Thaps2350.1;Parent=Thaps2350;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 795234 795818 . - . ID=Thaps2352;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU43];external_name=Thaps2352;logic_name=jgi_thaps3 chr2 ensembl transcript 795234 795818 . - . ID=Thaps2352;Parent=Thaps2352;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 795234 795818 . - 0 ID=Thaps2352;Parent=Thaps2352;rank=1 chr2 . exon 795234 795818 . - . ID=Thaps2352.1;Parent=Thaps2352;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 796474 797034 . - . ID=Thaps2353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU44];external_name=Thaps2353;logic_name=jgi_thaps3 chr2 ensembl transcript 796474 797034 . - . ID=Thaps2353;Parent=Thaps2353;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 796474 797034 . - 0 ID=Thaps2353;Parent=Thaps2353;rank=1 chr2 . exon 796474 797034 . - . ID=Thaps2353.1;Parent=Thaps2353;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 797579 798518 . + . ID=Thaps261327;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU45];external_name=Thaps261327;logic_name=jgi_thaps3 chr2 ensembl transcript 797579 798518 . + . ID=Thaps261327;Parent=Thaps261327;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 797579 797647 . + 0 ID=Thaps261327;Parent=Thaps261327;rank=1 chr2 . exon 797579 797647 . + . ID=Thaps261327.1;Parent=Thaps261327;constitutive=1;rank=1 chr2 . CDS 797721 798518 . + 0 ID=Thaps261327;Parent=Thaps261327;rank=2 chr2 . exon 797721 798518 . + . ID=Thaps261327.2;Parent=Thaps261327;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 798640 801165 . - . ID=Thaps268238;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU46];external_name=Thaps268238;logic_name=jgi_thaps3 chr2 ensembl transcript 798640 801165 . - . ID=Thaps268238;Parent=Thaps268238;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 798640 798981 . - 0 ID=Thaps268238;Parent=Thaps268238;rank=3 chr2 . exon 798640 798981 . - . ID=Thaps268238.3;Parent=Thaps268238;constitutive=1;rank=3 chr2 . CDS 799039 800286 . - 0 ID=Thaps268238;Parent=Thaps268238;rank=2 chr2 . exon 799039 800286 . - . ID=Thaps268238.2;Parent=Thaps268238;constitutive=1;rank=2 chr2 . CDS 800446 801165 . - 0 ID=Thaps268238;Parent=Thaps268238;rank=1 chr2 . repeat_region 806960 806967 . ? . description=dust chr2 ensembl protein_coding_gene 806634 807277 . - . ID=Thaps18078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU50];external_name=Thaps18078;logic_name=jgi_thaps3 chr2 ensembl transcript 806634 807277 . - . ID=Thaps18078;Parent=Thaps18078;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 806634 806753 . - 0 ID=Thaps18078;Parent=Thaps18078;rank=3 chr2 . exon 806634 806753 . - . ID=Thaps18078.3;Parent=Thaps18078;constitutive=1;rank=3 chr2 . CDS 806829 807126 . - 0 ID=Thaps18078;Parent=Thaps18078;rank=2 chr2 . exon 806829 807126 . - . ID=Thaps18078.2;Parent=Thaps18078;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 807207 807277 . - 0 ID=Thaps18078;Parent=Thaps18078;rank=1 chr2 . exon 807207 807277 . - . ID=Thaps18078.1;Parent=Thaps18078;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 802610 804359 . - . ID=Thaps21237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU48];external_name=Thaps21237;logic_name=jgi_thaps3 chr2 ensembl transcript 802610 804359 . - . ID=Thaps21237;Parent=Thaps21237;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 802610 803476 . - 0 ID=Thaps21237;Parent=Thaps21237;rank=2 chr2 . exon 802610 803476 . - . ID=Thaps21237.2;Parent=Thaps21237;constitutive=1;rank=2 chr2 . CDS 803553 804359 . - 0 ID=Thaps21237;Parent=Thaps21237;rank=1 chr2 . exon 803553 804359 . - . ID=Thaps21237.1;Parent=Thaps21237;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 804912 806318 . + . ID=Thaps21238;biotype=protein_coding;description=Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BU49];external_name=ALD3;logic_name=jgi_thaps3 chr2 ensembl transcript 804912 806318 . + . ID=Thaps21238;Parent=Thaps21238;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 804912 806318 . + 0 ID=Thaps21238;Parent=Thaps21238;rank=1 chr2 . exon 804912 806318 . + . ID=Thaps21238.1;Parent=Thaps21238;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 808012 809348 . + . ID=Thaps21239;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU51];external_name=Thaps21239;logic_name=jgi_thaps3 chr2 ensembl transcript 808012 809348 . + . ID=Thaps21239;Parent=Thaps21239;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 808012 808058 . + 0 ID=Thaps21239;Parent=Thaps21239;rank=1 chr2 . exon 808012 808058 . + . ID=Thaps21239.1;Parent=Thaps21239;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 808145 809348 . + 0 ID=Thaps21239;Parent=Thaps21239;rank=2 chr2 . exon 808145 809348 . + . ID=Thaps21239.2;Parent=Thaps21239;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 801433 802275 . + . ID=Thaps2356;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU47];external_name=Thaps2356;logic_name=jgi_thaps3 chr2 ensembl transcript 801433 802275 . + . ID=Thaps2356;Parent=Thaps2356;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 801433 802275 . + 0 ID=Thaps2356;Parent=Thaps2356;rank=1 chr2 . exon 801433 802275 . + . ID=Thaps2356.1;Parent=Thaps2356;constitutive=1;rank=1 chr2 . exon 800446 801165 . - . ID=Thaps268238.1;Parent=Thaps268238;constitutive=1;rank=1 chr2 . repeat_region 816294 816322 . ? . description=trf chr2 . repeat_region 816294 816322 . ? . description=trf chr2 ensembl protein_coding_gene 809571 810863 . - . ID=Thaps21240;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU52];external_name=Thaps21240;logic_name=jgi_thaps3 chr2 ensembl transcript 809571 810863 . - . ID=Thaps21240;Parent=Thaps21240;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 809571 810863 . - 0 ID=Thaps21240;Parent=Thaps21240;rank=1 chr2 . exon 809571 810863 . - . ID=Thaps21240.1;Parent=Thaps21240;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 811245 813590 . + . ID=Thaps2362;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU53];external_name=Thaps2362;logic_name=jgi_thaps3 chr2 ensembl transcript 811245 813590 . + . ID=Thaps2362;Parent=Thaps2362;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 811245 811867 . + 0 ID=Thaps2362;Parent=Thaps2362;rank=1 chr2 . exon 811245 811867 . + . ID=Thaps2362.1;Parent=Thaps2362;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 812088 812773 . + 0 ID=Thaps2362;Parent=Thaps2362;rank=2 chr2 . exon 812088 812773 . + . ID=Thaps2362.2;Parent=Thaps2362;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 812886 813045 . + 0 ID=Thaps2362;Parent=Thaps2362;rank=3 chr2 . exon 812886 813045 . + . ID=Thaps2362.3;Parent=Thaps2362;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 813071 813590 . + 0 ID=Thaps2362;Parent=Thaps2362;rank=4 chr2 . exon 813071 813590 . + . ID=Thaps2362.4;Parent=Thaps2362;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 815117 816062 . + . ID=Thaps2365;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU55];external_name=Thaps2365;logic_name=jgi_thaps3 chr2 ensembl transcript 815117 816062 . + . ID=Thaps2365;Parent=Thaps2365;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 815117 815587 . + 0 ID=Thaps2365;Parent=Thaps2365;rank=1 chr2 . exon 815117 815587 . + . ID=Thaps2365.1;Parent=Thaps2365;constitutive=1;rank=1 chr2 . CDS 815742 815898 . + 0 ID=Thaps2365;Parent=Thaps2365;rank=2 chr2 . exon 815742 815898 . + . ID=Thaps2365.2;Parent=Thaps2365;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 815926 816062 . + 0 ID=Thaps2365;Parent=Thaps2365;rank=3 chr2 . exon 815926 816062 . + . ID=Thaps2365.3;Parent=Thaps2365;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 816835 817401 . + . ID=Thaps268242;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU56];external_name=Thaps268242;logic_name=jgi_thaps3 chr2 ensembl transcript 816835 817401 . + . ID=Thaps268242;Parent=Thaps268242;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 816835 817401 . + 0 ID=Thaps268242;Parent=Thaps268242;rank=1 chr2 . exon 816835 817401 . + . ID=Thaps268242.1;Parent=Thaps268242;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 817917 818681 . - . ID=Thaps268243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU57];external_name=Thaps268243;logic_name=jgi_thaps3 chr2 ensembl transcript 817917 818681 . - . ID=Thaps268243;Parent=Thaps268243;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 817917 818681 . - 0 ID=Thaps268243;Parent=Thaps268243;rank=1 chr2 . exon 817917 818681 . - . ID=Thaps268243.1;Parent=Thaps268243;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 813720 814882 . + . ID=Thaps31759;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU54];external_name=Thaps31759;logic_name=jgi_thaps3 chr2 ensembl transcript 813720 814882 . + . ID=Thaps31759;Parent=Thaps31759;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 813720 814342 . + 0 ID=Thaps31759;Parent=Thaps31759;rank=1 chr2 . exon 813720 814342 . + . ID=Thaps31759.1;Parent=Thaps31759;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 814456 814514 . + 0 ID=Thaps31759;Parent=Thaps31759;rank=2 chr2 . exon 814456 814514 . + . ID=Thaps31759.2;Parent=Thaps31759;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 814614 814882 . + 0 ID=Thaps31759;Parent=Thaps31759;rank=3 chr2 . exon 814614 814882 . + . ID=Thaps31759.3;Parent=Thaps31759;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 824367 827127 . - . ID=Thaps21245;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU60];external_name=Thaps21245;logic_name=jgi_thaps3 chr2 ensembl transcript 824367 827127 . - . ID=Thaps21245;Parent=Thaps21245;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 824367 826287 . - 0 ID=Thaps21245;Parent=Thaps21245;rank=2 chr2 . exon 824367 826287 . - . ID=Thaps21245.2;Parent=Thaps21245;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 826382 827127 . - 0 ID=Thaps21245;Parent=Thaps21245;rank=1 chr2 . exon 826382 827127 . - . ID=Thaps21245.1;Parent=Thaps21245;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 823472 824029 . - . ID=Thaps2369;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU59];external_name=Thaps2369;logic_name=jgi_thaps3 chr2 ensembl transcript 823472 824029 . - . ID=Thaps2369;Parent=Thaps2369;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 823472 824029 . - 0 ID=Thaps2369;Parent=Thaps2369;rank=1 chr2 . exon 823472 824029 . - . ID=Thaps2369.1;Parent=Thaps2369;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 828476 829452 . - . ID=Thaps2371;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU61];external_name=Thaps2371;logic_name=jgi_thaps3 chr2 ensembl transcript 828476 829452 . - . ID=Thaps2371;Parent=Thaps2371;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 828476 829005 . - 0 ID=Thaps2371;Parent=Thaps2371;rank=2 chr2 . exon 828476 829005 . - . ID=Thaps2371.2;Parent=Thaps2371;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 829083 829452 . - 0 ID=Thaps2371;Parent=Thaps2371;rank=1 chr2 . exon 829083 829452 . - . ID=Thaps2371.1;Parent=Thaps2371;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 822771 823208 . + . ID=Thaps31747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU58];external_name=Thaps31747;logic_name=jgi_thaps3 chr2 ensembl transcript 822771 823208 . + . ID=Thaps31747;Parent=Thaps31747;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 822771 823036 . + 0 ID=Thaps31747;Parent=Thaps31747;rank=1 chr2 . exon 822771 823036 . + . ID=Thaps31747.1;Parent=Thaps31747;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 823145 823208 . + 0 ID=Thaps31747;Parent=Thaps31747;rank=2 chr2 . exon 823145 823208 . + . ID=Thaps31747.2;Parent=Thaps31747;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . repeat_region 829657 829672 . ? . description=dust chr2 ensembl protein_coding_gene 833310 833909 . - . ID=Thaps16952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU63];external_name=Thaps16952;logic_name=jgi_thaps3 chr2 ensembl transcript 833310 833909 . - . ID=Thaps16952;Parent=Thaps16952;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 833310 833909 . - 0 ID=Thaps16952;Parent=Thaps16952;rank=1 chr2 . exon 833310 833909 . - . ID=Thaps16952.1;Parent=Thaps16952;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 829938 832393 . - . ID=Thaps21246;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU62];external_name=Thaps21246;logic_name=jgi_thaps3 chr2 ensembl transcript 829938 832393 . - . ID=Thaps21246;Parent=Thaps21246;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 829938 830056 . - 0 ID=Thaps21246;Parent=Thaps21246;rank=4 chr2 . exon 829938 830056 . - . ID=Thaps21246.4;Parent=Thaps21246;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 830142 830172 . - 0 ID=Thaps21246;Parent=Thaps21246;rank=3 chr2 . exon 830142 830172 . - . ID=Thaps21246.3;Parent=Thaps21246;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 830257 830494 . - 0 ID=Thaps21246;Parent=Thaps21246;rank=2 chr2 . exon 830257 830494 . - . ID=Thaps21246.2;Parent=Thaps21246;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 830577 832393 . - 0 ID=Thaps21246;Parent=Thaps21246;rank=1 chr2 . exon 830577 832393 . - . ID=Thaps21246.1;Parent=Thaps21246;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 835239 836576 . - . ID=Thaps21247;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU64];external_name=Thaps21247;logic_name=jgi_thaps3 chr2 ensembl transcript 835239 836576 . - . ID=Thaps21247;Parent=Thaps21247;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 835239 835789 . - 0 ID=Thaps21247;Parent=Thaps21247;rank=2 chr2 . exon 835239 835789 . - . ID=Thaps21247.2;Parent=Thaps21247;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 835835 836576 . - 0 ID=Thaps21247;Parent=Thaps21247;rank=1 chr2 . exon 835835 836576 . - . ID=Thaps21247.1;Parent=Thaps21247;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 836858 838507 . + . ID=Thaps2375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU65];external_name=Thaps2375;logic_name=jgi_thaps3 chr2 ensembl transcript 836858 838507 . + . ID=Thaps2375;Parent=Thaps2375;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 836858 838507 . + 0 ID=Thaps2375;Parent=Thaps2375;rank=1 chr2 . exon 836858 838507 . + . ID=Thaps2375.1;Parent=Thaps2375;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 838789 839736 . - . ID=Thaps2376;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU66];external_name=Thaps2376;logic_name=jgi_thaps3 chr2 ensembl transcript 838789 839736 . - . ID=Thaps2376;Parent=Thaps2376;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 838789 839736 . - 0 ID=Thaps2376;Parent=Thaps2376;rank=1 chr2 . exon 838789 839736 . - . ID=Thaps2376.1;Parent=Thaps2376;constitutive=1;rank=1 chr2 . biological_region 843217 843222 0.999 + . logic_name=eponine chr2 . repeat_region 845820 845855 . ? . description=trf chr2 ensembl protein_coding_gene 843102 846834 . + . ID=Thaps21248;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU69];external_name=Thaps21248;logic_name=jgi_thaps3 chr2 ensembl transcript 843102 846834 . + . ID=Thaps21248;Parent=Thaps21248;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 843102 845883 . + 0 ID=Thaps21248;Parent=Thaps21248;rank=1 chr2 . exon 843102 845883 . + . ID=Thaps21248.1;Parent=Thaps21248;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 846098 846205 . + 0 ID=Thaps21248;Parent=Thaps21248;rank=2 chr2 . exon 846098 846205 . + . ID=Thaps21248.2;Parent=Thaps21248;constitutive=1;rank=2 chr2 . CDS 846281 846574 . + 0 ID=Thaps21248;Parent=Thaps21248;rank=3 chr2 . exon 846281 846574 . + . ID=Thaps21248.3;Parent=Thaps21248;constitutive=1;rank=3 chr2 . CDS 846662 846834 . + 0 ID=Thaps21248;Parent=Thaps21248;rank=4 chr2 . exon 846662 846834 . + . ID=Thaps21248.4;Parent=Thaps21248;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 840512 840985 . + . ID=Thaps2377;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU67];external_name=Thaps2377;logic_name=jgi_thaps3 chr2 ensembl transcript 840512 840985 . + . ID=Thaps2377;Parent=Thaps2377;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 840512 840985 . + 0 ID=Thaps2377;Parent=Thaps2377;rank=1 chr2 . exon 840512 840985 . + . ID=Thaps2377.1;Parent=Thaps2377;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 841150 842511 . - . ID=Thaps2378;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU68];external_name=Thaps2378;logic_name=jgi_thaps3 chr2 ensembl transcript 841150 842511 . - . ID=Thaps2378;Parent=Thaps2378;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 841150 841683 . - 0 ID=Thaps2378;Parent=Thaps2378;rank=4 chr2 . exon 841150 841683 . - . ID=Thaps2378.4;Parent=Thaps2378;constitutive=1;rank=4 chr2 . CDS 841832 841905 . - 0 ID=Thaps2378;Parent=Thaps2378;rank=3 chr2 . exon 841832 841905 . - . ID=Thaps2378.3;Parent=Thaps2378;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 842031 842100 . - 0 ID=Thaps2378;Parent=Thaps2378;rank=2 chr2 . exon 842031 842100 . - . ID=Thaps2378.2;Parent=Thaps2378;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 842200 842511 . - 0 ID=Thaps2378;Parent=Thaps2378;rank=1 chr2 . exon 842200 842511 . - . ID=Thaps2378.1;Parent=Thaps2378;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 847023 848348 . - . ID=Thaps2380;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU70];external_name=Thaps2380;logic_name=jgi_thaps3 chr2 ensembl transcript 847023 848348 . - . ID=Thaps2380;Parent=Thaps2380;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 847023 847897 . - 0 ID=Thaps2380;Parent=Thaps2380;rank=3 chr2 . exon 847023 847897 . - . ID=Thaps2380.3;Parent=Thaps2380;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 847977 848075 . - 0 ID=Thaps2380;Parent=Thaps2380;rank=2 chr2 . exon 847977 848075 . - . ID=Thaps2380.2;Parent=Thaps2380;constitutive=1;rank=2 chr2 . CDS 848123 848348 . - 0 ID=Thaps2380;Parent=Thaps2380;rank=1 chr2 . exon 848123 848348 . - . ID=Thaps2380.1;Parent=Thaps2380;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 850964 850979 . ? . description=dust chr2 ensembl protein_coding_gene 849244 850031 . - . ID=Thaps21249;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU71];external_name=Thaps21249;logic_name=jgi_thaps3 chr2 ensembl transcript 849244 850031 . - . ID=Thaps21249;Parent=Thaps21249;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 849244 849501 . - 0 ID=Thaps21249;Parent=Thaps21249;rank=2 chr2 . exon 849244 849501 . - . ID=Thaps21249.2;Parent=Thaps21249;constitutive=1;rank=2 chr2 . CDS 849876 850031 . - 0 ID=Thaps21249;Parent=Thaps21249;rank=1 chr2 . exon 849876 850031 . - . ID=Thaps21249.1;Parent=Thaps21249;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 850289 850930 . + . ID=Thaps21250;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU72];external_name=Thaps21250;logic_name=jgi_thaps3 chr2 ensembl transcript 850289 850930 . + . ID=Thaps21250;Parent=Thaps21250;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 850289 850930 . + 0 ID=Thaps21250;Parent=Thaps21250;rank=1 chr2 . exon 850289 850930 . + . ID=Thaps21250.1;Parent=Thaps21250;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 856231 856629 . + . ID=Thaps32216;biotype=protein_coding;description=RT5%2C ribosomal protein 5 [Source:UniProtKB/TrEMBL%3BAcc:B8BU75];external_name=RT5;logic_name=jgi_thaps3 chr2 ensembl transcript 856231 856629 . + . ID=Thaps32216;Parent=Thaps32216;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 856231 856629 . + 0 ID=Thaps32216;Parent=Thaps32216;rank=1 chr2 . exon 856231 856629 . + . ID=Thaps32216.1;Parent=Thaps32216;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 852234 852841 . - . ID=Thaps32285;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU73];external_name=Thaps32285;logic_name=jgi_thaps3 chr2 ensembl transcript 852234 852841 . - . ID=Thaps32285;Parent=Thaps32285;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 852234 852574 . - 0 ID=Thaps32285;Parent=Thaps32285;rank=2 chr2 . exon 852234 852574 . - . ID=Thaps32285.2;Parent=Thaps32285;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 852724 852841 . - 0 ID=Thaps32285;Parent=Thaps32285;rank=1 chr2 . exon 852724 852841 . - . ID=Thaps32285.1;Parent=Thaps32285;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 853549 854184 . - . ID=Thaps32510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU74];external_name=Thaps32510;logic_name=jgi_thaps3 chr2 ensembl transcript 853549 854184 . - . ID=Thaps32510;Parent=Thaps32510;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 853549 854184 . - 0 ID=Thaps32510;Parent=Thaps32510;rank=1 chr2 . exon 853549 854184 . - . ID=Thaps32510.1;Parent=Thaps32510;constitutive=1;rank=1 chr2 . repeat_region 868836 868859 . ? . description=trf chr2 ensembl protein_coding_gene 859419 860642 . - . ID=Thaps15246;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU76];external_name=Thaps15246;logic_name=jgi_thaps3 chr2 ensembl transcript 859419 860642 . - . ID=Thaps15246;Parent=Thaps15246;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 859419 860642 . - 0 ID=Thaps15246;Parent=Thaps15246;rank=1 chr2 . exon 859419 860642 . - . ID=Thaps15246.1;Parent=Thaps15246;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 862770 863859 . + . ID=Thaps2386;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU77];external_name=Thaps2386;logic_name=jgi_thaps3 chr2 ensembl transcript 862770 863859 . + . ID=Thaps2386;Parent=Thaps2386;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 862770 862923 . + 0 ID=Thaps2386;Parent=Thaps2386;rank=1 chr2 . exon 862770 862923 . + . ID=Thaps2386.1;Parent=Thaps2386;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 863003 863859 . + 0 ID=Thaps2386;Parent=Thaps2386;rank=2 chr2 . exon 863003 863859 . + . ID=Thaps2386.2;Parent=Thaps2386;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 864497 868843 . + . ID=Thaps2387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU78];external_name=Thaps2387;logic_name=jgi_thaps3 chr2 ensembl transcript 864497 868843 . + . ID=Thaps2387;Parent=Thaps2387;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 864497 865328 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=1 chr2 . exon 864497 865328 . + . ID=Thaps2387.1;Parent=Thaps2387;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 865562 865651 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=2 chr2 . exon 865562 865651 . + . ID=Thaps2387.2;Parent=Thaps2387;constitutive=1;rank=2 chr2 . CDS 865767 865850 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=3 chr2 . exon 865767 865850 . + . ID=Thaps2387.3;Parent=Thaps2387;constitutive=1;rank=3 chr2 . CDS 865973 866033 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=4 chr2 . exon 865973 866033 . + . ID=Thaps2387.4;Parent=Thaps2387;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 866256 866393 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=5 chr2 . exon 866256 866393 . + . ID=Thaps2387.5;Parent=Thaps2387;constitutive=1;rank=5 chr2 . CDS 866468 866532 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=6 chr2 . exon 866468 866532 . + . ID=Thaps2387.6;Parent=Thaps2387;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 866922 866993 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=7 chr2 . exon 866922 866993 . + . ID=Thaps2387.7;Parent=Thaps2387;constitutive=1;rank=7 chr2 . CDS 867105 867127 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=8 chr2 . exon 867105 867127 . + . ID=Thaps2387.8;Parent=Thaps2387;constitutive=1;ensembl_end_phase=2;rank=8 chr2 . CDS 867212 867691 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=9 chr2 . exon 867212 867691 . + . ID=Thaps2387.9;Parent=Thaps2387;constitutive=1;rank=9 chr2 . CDS 867806 868843 . + 0 ID=Thaps2387;Parent=Thaps2387;rank=10 chr2 . exon 867806 868843 . + . ID=Thaps2387.10;Parent=Thaps2387;constitutive=1;rank=10 chr2 ensembl gene 860978 862200 . - . ID=Thaps261341;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr2 ensembl transcript 860978 862200 . - . ID=Thaps261341;Parent=Thaps261341;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr2 . exon 860978 861274 . - . ID=Thaps261341.3;Parent=Thaps261341;constitutive=1;rank=3 chr2 . exon 861335 861814 . - . ID=Thaps261341.2;Parent=Thaps261341;constitutive=1;rank=2 chr2 . exon 861848 862200 . - . ID=Thaps261341.1;Parent=Thaps261341;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 874804 878055 . - . ID=Thaps2390;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU81];external_name=Thaps2390;logic_name=jgi_thaps3 chr2 ensembl transcript 874804 878055 . - . ID=Thaps2390;Parent=Thaps2390;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 874804 878055 . - 0 ID=Thaps2390;Parent=Thaps2390;rank=1 chr2 . exon 874804 878055 . - . ID=Thaps2390.1;Parent=Thaps2390;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 871515 872340 . - . ID=Thaps268247;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU79];external_name=Thaps268247;logic_name=jgi_thaps3 chr2 ensembl transcript 871515 872340 . - . ID=Thaps268247;Parent=Thaps268247;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 871515 871902 . - 0 ID=Thaps268247;Parent=Thaps268247;rank=2 chr2 . exon 871515 871902 . - . ID=Thaps268247.2;Parent=Thaps268247;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 871982 872340 . - 0 ID=Thaps268247;Parent=Thaps268247;rank=1 chr2 . exon 871982 872340 . - . ID=Thaps268247.1;Parent=Thaps268247;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 878901 879830 . + . ID=Thaps31951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU82];external_name=Thaps31951;logic_name=jgi_thaps3 chr2 ensembl transcript 878901 879830 . + . ID=Thaps31951;Parent=Thaps31951;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 878901 879299 . + 0 ID=Thaps31951;Parent=Thaps31951;rank=1 chr2 . exon 878901 879299 . + . ID=Thaps31951.1;Parent=Thaps31951;constitutive=1;rank=1 chr2 . CDS 879360 879830 . + 0 ID=Thaps31951;Parent=Thaps31951;rank=2 chr2 ensembl protein_coding_gene 873269 874606 . + . ID=Thaps32153;biotype=protein_coding;description=4-hydroxyphenylpyruvate dioxygenase [Source:UniProtKB/TrEMBL%3BAcc:B8BU80];external_name=HDP1;logic_name=jgi_thaps3 chr2 ensembl transcript 873269 874606 . + . ID=Thaps32153;Parent=Thaps32153;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 873269 873402 . + 0 ID=Thaps32153;Parent=Thaps32153;rank=1 chr2 . exon 873269 873402 . + . ID=Thaps32153.1;Parent=Thaps32153;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 873484 874606 . + 0 ID=Thaps32153;Parent=Thaps32153;rank=2 chr2 . exon 873484 874606 . + . ID=Thaps32153.2;Parent=Thaps32153;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . repeat_region 885207 885616 . - . description=TE2_TP chr2 . repeat_region 885414 885526 . ? . description=trf chr2 . repeat_region 885564 885616 . ? . description=trf chr2 . repeat_region 885613 885973 . - . description=TE2_TP chr2 . repeat_region 885653 885682 . ? . description=trf chr2 . repeat_region 887811 887867 . ? . description=trf chr2 ensembl protein_coding_gene 886264 887370 . + . ID=Thaps21255;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU86];external_name=Thaps21255;logic_name=jgi_thaps3 chr2 ensembl transcript 886264 887370 . + . ID=Thaps21255;Parent=Thaps21255;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 886264 886290 . + 0 ID=Thaps21255;Parent=Thaps21255;rank=1 chr2 . exon 886264 886290 . + . ID=Thaps21255.1;Parent=Thaps21255;constitutive=1;rank=1 chr2 . CDS 886418 886531 . + 0 ID=Thaps21255;Parent=Thaps21255;rank=2 chr2 . exon 886418 886531 . + . ID=Thaps21255.2;Parent=Thaps21255;constitutive=1;rank=2 chr2 . CDS 886623 886941 . + 0 ID=Thaps21255;Parent=Thaps21255;rank=3 chr2 . exon 886623 886941 . + . ID=Thaps21255.3;Parent=Thaps21255;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 887033 887370 . + 0 ID=Thaps21255;Parent=Thaps21255;rank=4 chr2 . exon 887033 887370 . + . ID=Thaps21255.4;Parent=Thaps21255;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 888294 889140 . - . ID=Thaps21256;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU87];external_name=Thaps21256;logic_name=jgi_thaps3 chr2 ensembl transcript 888294 889140 . - . ID=Thaps21256;Parent=Thaps21256;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 888294 888299 . - 0 ID=Thaps21256;Parent=Thaps21256;rank=2 chr2 . exon 888294 888299 . - . ID=Thaps21256.2;Parent=Thaps21256;constitutive=1;rank=2 chr2 . CDS 888373 889140 . - 0 ID=Thaps21256;Parent=Thaps21256;rank=1 chr2 . exon 888373 889140 . - . ID=Thaps21256.1;Parent=Thaps21256;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 880222 881329 . + . ID=Thaps2392;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU83];external_name=Thaps2392;logic_name=jgi_thaps3 chr2 ensembl transcript 880222 881329 . + . ID=Thaps2392;Parent=Thaps2392;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 880222 881271 . + 0 ID=Thaps2392;Parent=Thaps2392;rank=1 chr2 . exon 880222 881271 . + . ID=Thaps2392.1;Parent=Thaps2392;constitutive=1;rank=1 chr2 . CDS 881297 881329 . + 0 ID=Thaps2392;Parent=Thaps2392;rank=2 chr2 . exon 881297 881329 . + . ID=Thaps2392.2;Parent=Thaps2392;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 881562 882990 . - . ID=Thaps268248;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU84];external_name=Thaps268248;logic_name=jgi_thaps3 chr2 ensembl transcript 881562 882990 . - . ID=Thaps268248;Parent=Thaps268248;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 881562 882093 . - 0 ID=Thaps268248;Parent=Thaps268248;rank=4 chr2 . exon 881562 882093 . - . ID=Thaps268248.4;Parent=Thaps268248;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 882164 882313 . - 0 ID=Thaps268248;Parent=Thaps268248;rank=3 chr2 . exon 882164 882313 . - . ID=Thaps268248.3;Parent=Thaps268248;constitutive=1;rank=3 chr2 . CDS 882400 882770 . - 0 ID=Thaps268248;Parent=Thaps268248;rank=2 chr2 . exon 882400 882770 . - . ID=Thaps268248.2;Parent=Thaps268248;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 882844 882990 . - 0 ID=Thaps268248;Parent=Thaps268248;rank=1 chr2 . exon 882844 882990 . - . ID=Thaps268248.1;Parent=Thaps268248;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 883251 884530 . - . ID=Thaps27048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU85];external_name=Thaps27048;logic_name=jgi_thaps3 chr2 ensembl transcript 883251 884530 . - . ID=Thaps27048;Parent=Thaps27048;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 883251 883399 . - 0 ID=Thaps27048;Parent=Thaps27048;rank=2 chr2 . exon 883251 883399 . - . ID=Thaps27048.2;Parent=Thaps27048;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 883480 884530 . - 0 ID=Thaps27048;Parent=Thaps27048;rank=1 chr2 . exon 883480 884530 . - . ID=Thaps27048.1;Parent=Thaps27048;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 879360 879830 . + . ID=Thaps31951.2;Parent=Thaps31951;constitutive=1;rank=2 chr2 . repeat_region 898183 898190 . ? . description=dust chr2 ensembl protein_coding_gene 889501 891318 . + . ID=Thaps21257;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU88];external_name=Thaps21257;logic_name=jgi_thaps3 chr2 ensembl transcript 889501 891318 . + . ID=Thaps21257;Parent=Thaps21257;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 889501 890946 . + 0 ID=Thaps21257;Parent=Thaps21257;rank=1 chr2 . exon 889501 890946 . + . ID=Thaps21257.1;Parent=Thaps21257;constitutive=1;rank=1 chr2 . CDS 891019 891318 . + 0 ID=Thaps21257;Parent=Thaps21257;rank=2 chr2 . exon 891019 891318 . + . ID=Thaps21257.2;Parent=Thaps21257;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 892405 894407 . + . ID=Thaps21258;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU90];external_name=Thaps21258;logic_name=jgi_thaps3 chr2 ensembl transcript 892405 894407 . + . ID=Thaps21258;Parent=Thaps21258;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 892405 892817 . + 0 ID=Thaps21258;Parent=Thaps21258;rank=1 chr2 . exon 892405 892817 . + . ID=Thaps21258.1;Parent=Thaps21258;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 892929 893533 . + 0 ID=Thaps21258;Parent=Thaps21258;rank=2 chr2 . exon 892929 893533 . + . ID=Thaps21258.2;Parent=Thaps21258;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 893612 893879 . + 0 ID=Thaps21258;Parent=Thaps21258;rank=3 chr2 . exon 893612 893879 . + . ID=Thaps21258.3;Parent=Thaps21258;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 893972 894407 . + 0 ID=Thaps21258;Parent=Thaps21258;rank=4 chr2 . exon 893972 894407 . + . ID=Thaps21258.4;Parent=Thaps21258;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 896543 897796 . - . ID=Thaps2399;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU92];external_name=Thaps2399;logic_name=jgi_thaps3 chr2 ensembl transcript 896543 897796 . - . ID=Thaps2399;Parent=Thaps2399;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 896543 897796 . - 0 ID=Thaps2399;Parent=Thaps2399;rank=1 chr2 . exon 896543 897796 . - . ID=Thaps2399.1;Parent=Thaps2399;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 897949 899905 . + . ID=Thaps2400;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU93];external_name=Thaps2400;logic_name=jgi_thaps3 chr2 ensembl transcript 897949 899905 . + . ID=Thaps2400;Parent=Thaps2400;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 897949 898174 . + 0 ID=Thaps2400;Parent=Thaps2400;rank=1 chr2 . exon 897949 898174 . + . ID=Thaps2400.1;Parent=Thaps2400;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 898252 898551 . + 0 ID=Thaps2400;Parent=Thaps2400;rank=2 chr2 . exon 898252 898551 . + . ID=Thaps2400.2;Parent=Thaps2400;constitutive=1;rank=2 chr2 . CDS 898632 899329 . + 0 ID=Thaps2400;Parent=Thaps2400;rank=3 chr2 . exon 898632 899329 . + . ID=Thaps2400.3;Parent=Thaps2400;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 899413 899459 . + 0 ID=Thaps2400;Parent=Thaps2400;rank=4 chr2 . CDS 899536 899905 . + 0 ID=Thaps2400;Parent=Thaps2400;rank=5 chr2 ensembl protein_coding_gene 895422 896207 . + . ID=Thaps32051;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU91];external_name=Thaps32051;logic_name=jgi_thaps3 chr2 ensembl transcript 895422 896207 . + . ID=Thaps32051;Parent=Thaps32051;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 895422 895662 . + 0 ID=Thaps32051;Parent=Thaps32051;rank=1 chr2 . exon 895422 895662 . + . ID=Thaps32051.1;Parent=Thaps32051;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 895813 895975 . + 0 ID=Thaps32051;Parent=Thaps32051;rank=2 chr2 . exon 895813 895975 . + . ID=Thaps32051.2;Parent=Thaps32051;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 896084 896207 . + 0 ID=Thaps32051;Parent=Thaps32051;rank=3 chr2 . exon 896084 896207 . + . ID=Thaps32051.3;Parent=Thaps32051;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 891565 892014 . - . ID=Thaps32173;biotype=protein_coding;description=RT16%2C ribosomal protein 16 mitochondrial small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BU89];external_name=RT16;logic_name=jgi_thaps3 chr2 ensembl transcript 891565 892014 . - . ID=Thaps32173;Parent=Thaps32173;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 891565 891720 . - 0 ID=Thaps32173;Parent=Thaps32173;rank=2 chr2 . exon 891565 891720 . - . ID=Thaps32173.2;Parent=Thaps32173;constitutive=1;rank=2 chr2 . CDS 891907 892014 . - 0 ID=Thaps32173;Parent=Thaps32173;rank=1 chr2 . exon 891907 892014 . - . ID=Thaps32173.1;Parent=Thaps32173;constitutive=1;rank=1 chr2 . repeat_region 907793 907861 . - . description=TE2c_TP chr2 ensembl protein_coding_gene 900228 901754 . - . ID=Thaps21259;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU94];external_name=Thaps21259;logic_name=jgi_thaps3 chr2 ensembl transcript 900228 901754 . - . ID=Thaps21259;Parent=Thaps21259;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 900228 900548 . - 0 ID=Thaps21259;Parent=Thaps21259;rank=2 chr2 . exon 900228 900548 . - . ID=Thaps21259.2;Parent=Thaps21259;constitutive=1;rank=2 chr2 . CDS 900633 901754 . - 0 ID=Thaps21259;Parent=Thaps21259;rank=1 chr2 . exon 900633 901754 . - . ID=Thaps21259.1;Parent=Thaps21259;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 902883 906589 . + . ID=Thaps21260;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU95];external_name=Thaps21260;logic_name=jgi_thaps3 chr2 ensembl transcript 902883 906589 . + . ID=Thaps21260;Parent=Thaps21260;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 902883 904302 . + 0 ID=Thaps21260;Parent=Thaps21260;rank=1 chr2 . exon 902883 904302 . + . ID=Thaps21260.1;Parent=Thaps21260;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 904385 906016 . + 0 ID=Thaps21260;Parent=Thaps21260;rank=2 chr2 . exon 904385 906016 . + . ID=Thaps21260.2;Parent=Thaps21260;constitutive=1;rank=2 chr2 . CDS 906045 906589 . + 0 ID=Thaps21260;Parent=Thaps21260;rank=3 chr2 . exon 906045 906589 . + . ID=Thaps21260.3;Parent=Thaps21260;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 907067 907516 . - . ID=Thaps21261;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU96];external_name=Thaps21261;logic_name=jgi_thaps3 chr2 ensembl transcript 907067 907516 . - . ID=Thaps21261;Parent=Thaps21261;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 907067 907516 . - 0 ID=Thaps21261;Parent=Thaps21261;rank=1 chr2 . exon 907067 907516 . - . ID=Thaps21261.1;Parent=Thaps21261;constitutive=1;rank=1 chr2 . exon 899413 899459 . + . ID=Thaps2400.4;Parent=Thaps2400;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . exon 899536 899905 . + . ID=Thaps2400.5;Parent=Thaps2400;constitutive=1;ensembl_end_phase=1;rank=5 chr2 ensembl protein_coding_gene 908855 909795 . - . ID=Thaps31818;biotype=protein_coding;description=Mitochondriale tricarboxylate carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU97];external_name=Thaps31818;logic_name=jgi_thaps3 chr2 ensembl transcript 908855 909795 . - . ID=Thaps31818;Parent=Thaps31818;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 908855 909055 . - 0 ID=Thaps31818;Parent=Thaps31818;rank=2 chr2 . exon 908855 909055 . - . ID=Thaps31818.2;Parent=Thaps31818;constitutive=1;rank=2 chr2 . CDS 909163 909795 . - 0 ID=Thaps31818;Parent=Thaps31818;rank=1 chr2 . repeat_region 916711 916718 . ? . description=dust chr2 ensembl protein_coding_gene 916795 921859 . + . ID=Thaps2407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUA0];external_name=Thaps2407;logic_name=jgi_thaps3 chr2 ensembl transcript 916795 921859 . + . ID=Thaps2407;Parent=Thaps2407;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 916795 916943 . + 0 ID=Thaps2407;Parent=Thaps2407;rank=1 chr2 . exon 916795 916943 . + . ID=Thaps2407.1;Parent=Thaps2407;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 916993 921604 . + 0 ID=Thaps2407;Parent=Thaps2407;rank=2 chr2 . exon 916993 921604 . + . ID=Thaps2407.2;Parent=Thaps2407;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 921629 921859 . + 0 ID=Thaps2407;Parent=Thaps2407;rank=3 chr2 ensembl protein_coding_gene 910028 913355 . - . ID=Thaps268252;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU98];external_name=Thaps268252;logic_name=jgi_thaps3 chr2 ensembl transcript 910028 913355 . - . ID=Thaps268252;Parent=Thaps268252;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 910028 910581 . - 0 ID=Thaps268252;Parent=Thaps268252;rank=6 chr2 . exon 910028 910581 . - . ID=Thaps268252.6;Parent=Thaps268252;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 910714 910929 . - 0 ID=Thaps268252;Parent=Thaps268252;rank=5 chr2 . exon 910714 910929 . - . ID=Thaps268252.5;Parent=Thaps268252;constitutive=1;rank=5 chr2 . CDS 910990 911184 . - 0 ID=Thaps268252;Parent=Thaps268252;rank=4 chr2 . exon 910990 911184 . - . ID=Thaps268252.4;Parent=Thaps268252;constitutive=1;rank=4 chr2 . CDS 911273 911687 . - 0 ID=Thaps268252;Parent=Thaps268252;rank=3 chr2 . exon 911273 911687 . - . ID=Thaps268252.3;Parent=Thaps268252;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 911871 912924 . - 0 ID=Thaps268252;Parent=Thaps268252;rank=2 chr2 . exon 911871 912924 . - . ID=Thaps268252.2;Parent=Thaps268252;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 912961 913355 . - 0 ID=Thaps268252;Parent=Thaps268252;rank=1 chr2 . exon 912961 913355 . - . ID=Thaps268252.1;Parent=Thaps268252;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . exon 909163 909795 . - . ID=Thaps31818.1;Parent=Thaps31818;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 915776 916234 . - . ID=Thaps31894;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BU99];external_name=Thaps31894;logic_name=jgi_thaps3 chr2 ensembl transcript 915776 916234 . - . ID=Thaps31894;Parent=Thaps31894;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 915776 916234 . - 0 ID=Thaps31894;Parent=Thaps31894;rank=1 chr2 . exon 915776 916234 . - . ID=Thaps31894.1;Parent=Thaps31894;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 922984 923615 . - . ID=Thaps21263;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUA1];external_name=Thaps21263;logic_name=jgi_thaps3 chr2 ensembl transcript 922984 923615 . - . ID=Thaps21263;Parent=Thaps21263;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 922984 923223 . - 0 ID=Thaps21263;Parent=Thaps21263;rank=3 chr2 . exon 922984 923223 . - . ID=Thaps21263.3;Parent=Thaps21263;constitutive=1;rank=3 chr2 . CDS 923304 923404 . - 0 ID=Thaps21263;Parent=Thaps21263;rank=2 chr2 . exon 923304 923404 . - . ID=Thaps21263.2;Parent=Thaps21263;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 923489 923615 . - 0 ID=Thaps21263;Parent=Thaps21263;rank=1 chr2 . exon 923489 923615 . - . ID=Thaps21263.1;Parent=Thaps21263;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 921629 921859 . + . ID=Thaps2407.3;Parent=Thaps2407;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 924165 925799 . - . ID=Thaps2409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUA2];external_name=Thaps2409;logic_name=jgi_thaps3 chr2 ensembl transcript 924165 925799 . - . ID=Thaps2409;Parent=Thaps2409;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 924165 925577 . - 0 ID=Thaps2409;Parent=Thaps2409;rank=2 chr2 . exon 924165 925577 . - . ID=Thaps2409.2;Parent=Thaps2409;constitutive=1;rank=2 chr2 . CDS 925677 925799 . - 0 ID=Thaps2409;Parent=Thaps2409;rank=1 chr2 . exon 925677 925799 . - . ID=Thaps2409.1;Parent=Thaps2409;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 926753 929035 . + . ID=Thaps32016;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUA3];external_name=Thaps32016;logic_name=jgi_thaps3 chr2 ensembl transcript 926753 929035 . + . ID=Thaps32016;Parent=Thaps32016;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 926753 927246 . + 0 ID=Thaps32016;Parent=Thaps32016;rank=1 chr2 . exon 926753 927246 . + . ID=Thaps32016.1;Parent=Thaps32016;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 928771 929035 . + 0 ID=Thaps32016;Parent=Thaps32016;rank=2 chr2 . exon 928771 929035 . + . ID=Thaps32016.2;Parent=Thaps32016;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . repeat_region 933860 933873 . ? . description=dust chr2 . repeat_region 937271 937304 . ? . description=trf chr2 . repeat_region 937271 937304 . ? . description=dust chr2 . repeat_region 938306 938326 . ? . description=trf chr2 . repeat_region 938306 938326 . ? . description=dust chr2 ensembl protein_coding_gene 934971 937664 . - . ID=Thaps21265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUA6];external_name=Thaps21265;logic_name=jgi_thaps3 chr2 ensembl transcript 934971 937664 . - . ID=Thaps21265;Parent=Thaps21265;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 934971 937664 . - 0 ID=Thaps21265;Parent=Thaps21265;rank=1 chr2 . exon 934971 937664 . - . ID=Thaps21265.1;Parent=Thaps21265;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 933446 933958 . + . ID=Thaps2412;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUA5];external_name=Thaps2412;logic_name=jgi_thaps3 chr2 ensembl transcript 933446 933958 . + . ID=Thaps2412;Parent=Thaps2412;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 933446 933958 . + 0 ID=Thaps2412;Parent=Thaps2412;rank=1 chr2 . exon 933446 933958 . + . ID=Thaps2412.1;Parent=Thaps2412;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 931875 932453 . - . ID=Thaps39497;biotype=protein_coding;description=Arf-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUA4];external_name=Thaps39497;logic_name=jgi_thaps3 chr2 ensembl transcript 931875 932453 . - . ID=Thaps39497;Parent=Thaps39497;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 931875 932453 . - 0 ID=Thaps39497;Parent=Thaps39497;rank=1 chr2 . exon 931875 932453 . - . ID=Thaps39497.1;Parent=Thaps39497;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 938370 938774 . + . ID=Thaps39499;biotype=protein_coding;description=RL14%2C ribosomal protein 14 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BUA7];external_name=RL14;logic_name=jgi_thaps3 chr2 ensembl transcript 938370 938774 . + . ID=Thaps39499;Parent=Thaps39499;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 938370 938774 . + 0 ID=Thaps39499;Parent=Thaps39499;rank=1 chr2 . exon 938370 938774 . + . ID=Thaps39499.1;Parent=Thaps39499;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 943359 948526 . - . ID=Thaps21268;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUB0];external_name=Thaps21268;logic_name=jgi_thaps3 chr2 ensembl transcript 943359 948526 . - . ID=Thaps21268;Parent=Thaps21268;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 943359 943969 . - 0 ID=Thaps21268;Parent=Thaps21268;rank=6 chr2 . exon 943359 943969 . - . ID=Thaps21268.6;Parent=Thaps21268;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 944043 944465 . - 0 ID=Thaps21268;Parent=Thaps21268;rank=5 chr2 . exon 944043 944465 . - . ID=Thaps21268.5;Parent=Thaps21268;constitutive=1;rank=5 chr2 . CDS 944549 947020 . - 0 ID=Thaps21268;Parent=Thaps21268;rank=4 chr2 . exon 944549 947020 . - . ID=Thaps21268.4;Parent=Thaps21268;constitutive=1;rank=4 chr2 . CDS 947115 947357 . - 0 ID=Thaps21268;Parent=Thaps21268;rank=3 chr2 . exon 947115 947357 . - . ID=Thaps21268.3;Parent=Thaps21268;constitutive=1;rank=3 chr2 . CDS 947450 947818 . - 0 ID=Thaps21268;Parent=Thaps21268;rank=2 chr2 . exon 947450 947818 . - . ID=Thaps21268.2;Parent=Thaps21268;constitutive=1;rank=2 chr2 . CDS 947956 948526 . - 0 ID=Thaps21268;Parent=Thaps21268;rank=1 chr2 . exon 947956 948526 . - . ID=Thaps21268.1;Parent=Thaps21268;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 948890 950935 . + . ID=Thaps2418;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUB1];external_name=Thaps2418;logic_name=jgi_thaps3 chr2 ensembl transcript 948890 950935 . + . ID=Thaps2418;Parent=Thaps2418;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 948890 950935 . + 0 ID=Thaps2418;Parent=Thaps2418;rank=1 chr2 . exon 948890 950935 . + . ID=Thaps2418.1;Parent=Thaps2418;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 939902 941458 . - . ID=Thaps261357;biotype=protein_coding;external_name=Thaps261357;logic_name=jgi_thaps3 chr2 ensembl transcript 939902 941458 . - . ID=Thaps261357;Parent=Thaps261357;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 939902 940172 . - 0 ID=Thaps261357;Parent=Thaps261357;rank=4 chr2 . exon 939902 940172 . - . ID=Thaps261357.4;Parent=Thaps261357;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 940440 940607 . - 0 ID=Thaps261357;Parent=Thaps261357;rank=3 chr2 . exon 940440 940607 . - . ID=Thaps261357.3;Parent=Thaps261357;constitutive=1;rank=3 chr2 . CDS 940761 940963 . - 0 ID=Thaps261357;Parent=Thaps261357;rank=2 chr2 . exon 940761 940963 . - . ID=Thaps261357.2;Parent=Thaps261357;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 941279 941458 . - 0 ID=Thaps261357;Parent=Thaps261357;rank=1 chr2 . exon 941279 941458 . - . ID=Thaps261357.1;Parent=Thaps261357;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 942315 943243 . + . ID=Thaps268256;biotype=protein_coding;description=Probable phosphoribosyl-amp cyclohydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8BUA9];external_name=Thaps268256;logic_name=jgi_thaps3 chr2 ensembl transcript 942315 943243 . + . ID=Thaps268256;Parent=Thaps268256;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 942315 942575 . + 0 ID=Thaps268256;Parent=Thaps268256;rank=1 chr2 . exon 942315 942575 . + . ID=Thaps268256.1;Parent=Thaps268256;constitutive=1;rank=1 chr2 . CDS 942686 943243 . + 0 ID=Thaps268256;Parent=Thaps268256;rank=2 chr2 . exon 942686 943243 . + . ID=Thaps268256.2;Parent=Thaps268256;constitutive=1;rank=2 chr2 . repeat_region 953276 953299 . ? . description=trf chr2 . repeat_region 956588 956595 . ? . description=dust chr2 ensembl protein_coding_gene 953343 954493 . + . ID=Thaps2420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUB4];external_name=Thaps2420;logic_name=jgi_thaps3 chr2 ensembl transcript 953343 954493 . + . ID=Thaps2420;Parent=Thaps2420;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 953343 953445 . + 0 ID=Thaps2420;Parent=Thaps2420;rank=1 chr2 . exon 953343 953445 . + . ID=Thaps2420.1;Parent=Thaps2420;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 953550 954493 . + 0 ID=Thaps2420;Parent=Thaps2420;rank=2 chr2 . exon 953550 954493 . + . ID=Thaps2420.2;Parent=Thaps2420;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 951043 951879 . - . ID=Thaps268257;biotype=protein_coding;description=Probable 3-oxoacyl-reductase domain containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUB2];external_name=Thaps268257;logic_name=jgi_thaps3 chr2 ensembl transcript 951043 951879 . - . ID=Thaps268257;Parent=Thaps268257;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 951043 951653 . - 0 ID=Thaps268257;Parent=Thaps268257;rank=2 chr2 . exon 951043 951653 . - . ID=Thaps268257.2;Parent=Thaps268257;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 951699 951879 . - 0 ID=Thaps268257;Parent=Thaps268257;rank=1 chr2 . exon 951699 951879 . - . ID=Thaps268257.1;Parent=Thaps268257;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 951961 952674 . - . ID=Thaps31737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUB3];external_name=Thaps31737;logic_name=jgi_thaps3 chr2 ensembl transcript 951961 952674 . - . ID=Thaps31737;Parent=Thaps31737;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 951961 952674 . - 0 ID=Thaps31737;Parent=Thaps31737;rank=1 chr2 . exon 951961 952674 . - . ID=Thaps31737.1;Parent=Thaps31737;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 959077 959871 . - . ID=Thaps14490;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUB5];external_name=Thaps14490;logic_name=jgi_thaps3 chr2 ensembl transcript 959077 959871 . - . ID=Thaps14490;Parent=Thaps14490;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 959077 959871 . - 0 ID=Thaps14490;Parent=Thaps14490;rank=1 chr2 . exon 959077 959871 . - . ID=Thaps14490.1;Parent=Thaps14490;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 964242 965382 . - . ID=Thaps21271;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUB6];external_name=Thaps21271;logic_name=jgi_thaps3 chr2 ensembl transcript 964242 965382 . - . ID=Thaps21271;Parent=Thaps21271;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 964242 964844 . - 0 ID=Thaps21271;Parent=Thaps21271;rank=2 chr2 . exon 964242 964844 . - . ID=Thaps21271.2;Parent=Thaps21271;constitutive=1;rank=2 chr2 . CDS 964954 965382 . - 0 ID=Thaps21271;Parent=Thaps21271;rank=1 chr2 . exon 964954 965382 . - . ID=Thaps21271.1;Parent=Thaps21271;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 967036 969246 . - . ID=Thaps21272;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUB8];external_name=Thaps21272;logic_name=jgi_thaps3 chr2 ensembl transcript 967036 969246 . - . ID=Thaps21272;Parent=Thaps21272;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 967036 969246 . - 0 ID=Thaps21272;Parent=Thaps21272;rank=1 chr2 . exon 967036 969246 . - . ID=Thaps21272.1;Parent=Thaps21272;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 966003 966749 . + . ID=Thaps31703;biotype=protein_coding;description=Guanylate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BUB7];external_name=Thaps31703;logic_name=jgi_thaps3 chr2 ensembl transcript 966003 966749 . + . ID=Thaps31703;Parent=Thaps31703;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 966003 966402 . + 0 ID=Thaps31703;Parent=Thaps31703;rank=1 chr2 . exon 966003 966402 . + . ID=Thaps31703.1;Parent=Thaps31703;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 966490 966749 . + 0 ID=Thaps31703;Parent=Thaps31703;rank=2 chr2 . exon 966490 966749 . + . ID=Thaps31703.2;Parent=Thaps31703;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 972808 972989 . ? . description=trf chr2 ensembl protein_coding_gene 978572 980365 . + . ID=Thaps21274;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUC2];external_name=Thaps21274;logic_name=jgi_thaps3 chr2 ensembl transcript 978572 980365 . + . ID=Thaps21274;Parent=Thaps21274;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 978572 979338 . + 0 ID=Thaps21274;Parent=Thaps21274;rank=1 chr2 . exon 978572 979338 . + . ID=Thaps21274.1;Parent=Thaps21274;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 979434 979493 . + 0 ID=Thaps21274;Parent=Thaps21274;rank=2 chr2 . CDS 979582 980365 . + 0 ID=Thaps21274;Parent=Thaps21274;rank=3 chr2 ensembl protein_coding_gene 969765 973413 . + . ID=Thaps2425;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUB9];external_name=Thaps2425;logic_name=jgi_thaps3 chr2 ensembl transcript 969765 973413 . + . ID=Thaps2425;Parent=Thaps2425;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 969765 971389 . + 0 ID=Thaps2425;Parent=Thaps2425;rank=1 chr2 . exon 969765 971389 . + . ID=Thaps2425.1;Parent=Thaps2425;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 971470 973294 . + 0 ID=Thaps2425;Parent=Thaps2425;rank=2 chr2 . exon 971470 973294 . + . ID=Thaps2425.2;Parent=Thaps2425;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 973381 973413 . + 0 ID=Thaps2425;Parent=Thaps2425;rank=3 chr2 . exon 973381 973413 . + . ID=Thaps2425.3;Parent=Thaps2425;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 973585 975081 . - . ID=Thaps2426;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUC0];external_name=Thaps2426;logic_name=jgi_thaps3 chr2 ensembl transcript 973585 975081 . - . ID=Thaps2426;Parent=Thaps2426;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 973585 974911 . - 0 ID=Thaps2426;Parent=Thaps2426;rank=2 chr2 . exon 973585 974911 . - . ID=Thaps2426.2;Parent=Thaps2426;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 975008 975081 . - 0 ID=Thaps2426;Parent=Thaps2426;rank=1 chr2 . exon 975008 975081 . - . ID=Thaps2426.1;Parent=Thaps2426;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 976155 977048 . + . ID=Thaps32140;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUC1];external_name=Thaps32140;logic_name=jgi_thaps3 chr2 ensembl transcript 976155 977048 . + . ID=Thaps32140;Parent=Thaps32140;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 976155 977048 . + 0 ID=Thaps32140;Parent=Thaps32140;rank=1 chr2 . exon 976155 977048 . + . ID=Thaps32140.1;Parent=Thaps32140;constitutive=1;rank=1 chr2 . repeat_region 981829 981848 . ? . description=dust chr2 . repeat_region 985201 985262 . ? . description=dust chr2 . exon 979434 979493 . + . ID=Thaps21274.2;Parent=Thaps21274;constitutive=1;rank=2 chr2 . exon 979582 980365 . + . ID=Thaps21274.3;Parent=Thaps21274;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 981959 983478 . - . ID=Thaps268262;biotype=protein_coding;description=Aldehyde dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BUC3];external_name=Thaps268262;logic_name=jgi_thaps3 chr2 ensembl transcript 981959 983478 . - . ID=Thaps268262;Parent=Thaps268262;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 981959 982647 . - 0 ID=Thaps268262;Parent=Thaps268262;rank=3 chr2 . exon 981959 982647 . - . ID=Thaps268262.3;Parent=Thaps268262;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 982719 982864 . - 0 ID=Thaps268262;Parent=Thaps268262;rank=2 chr2 . exon 982719 982864 . - . ID=Thaps268262.2;Parent=Thaps268262;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 982952 983478 . - 0 ID=Thaps268262;Parent=Thaps268262;rank=1 chr2 . exon 982952 983478 . - . ID=Thaps268262.1;Parent=Thaps268262;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 994268 994302 . ? . description=trf chr2 ensembl protein_coding_gene 995246 998275 . - . ID=Thaps21277;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUC5];external_name=Thaps21277;logic_name=jgi_thaps3 chr2 ensembl transcript 995246 998275 . - . ID=Thaps21277;Parent=Thaps21277;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 995246 995278 . - 0 ID=Thaps21277;Parent=Thaps21277;rank=4 chr2 . exon 995246 995278 . - . ID=Thaps21277.4;Parent=Thaps21277;constitutive=1;rank=4 chr2 . CDS 995300 996460 . - 0 ID=Thaps21277;Parent=Thaps21277;rank=3 chr2 . exon 995300 996460 . - . ID=Thaps21277.3;Parent=Thaps21277;constitutive=1;rank=3 chr2 . CDS 996799 997206 . - 0 ID=Thaps21277;Parent=Thaps21277;rank=2 chr2 . exon 996799 997206 . - . ID=Thaps21277.2;Parent=Thaps21277;constitutive=1;rank=2 chr2 . CDS 997316 998275 . - 0 ID=Thaps21277;Parent=Thaps21277;rank=1 chr2 . exon 997316 998275 . - . ID=Thaps21277.1;Parent=Thaps21277;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 998760 1000191 . - . ID=Thaps2433;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUC6];external_name=Thaps2433;logic_name=jgi_thaps3 chr2 ensembl transcript 998760 1000191 . - . ID=Thaps2433;Parent=Thaps2433;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 998760 999242 . - 0 ID=Thaps2433;Parent=Thaps2433;rank=2 chr2 . exon 998760 999242 . - . ID=Thaps2433.2;Parent=Thaps2433;constitutive=1;rank=2 chr2 . CDS 999322 1000191 . - 0 ID=Thaps2433;Parent=Thaps2433;rank=1 chr2 ensembl protein_coding_gene 991258 993692 . + . ID=Thaps261368;biotype=protein_coding;description=DNA mismatch repair mutS protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUC4];external_name=Thaps261368;logic_name=jgi_thaps3 chr2 ensembl transcript 991258 993692 . + . ID=Thaps261368;Parent=Thaps261368;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 991258 991762 . + 0 ID=Thaps261368;Parent=Thaps261368;rank=1 chr2 . exon 991258 991762 . + . ID=Thaps261368.1;Parent=Thaps261368;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 991829 991932 . + 0 ID=Thaps261368;Parent=Thaps261368;rank=2 chr2 . exon 991829 991932 . + . ID=Thaps261368.2;Parent=Thaps261368;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 992221 992610 . + 0 ID=Thaps261368;Parent=Thaps261368;rank=3 chr2 . exon 992221 992610 . + . ID=Thaps261368.3;Parent=Thaps261368;constitutive=1;rank=3 chr2 . CDS 992716 992963 . + 0 ID=Thaps261368;Parent=Thaps261368;rank=4 chr2 . exon 992716 992963 . + . ID=Thaps261368.4;Parent=Thaps261368;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 993036 993692 . + 0 ID=Thaps261368;Parent=Thaps261368;rank=5 chr2 . exon 993036 993692 . + . ID=Thaps261368.5;Parent=Thaps261368;constitutive=1;rank=5 chr2 ensembl protein_coding_gene 1006672 1008753 . + . ID=Thaps21279;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD1];external_name=Thaps21279;logic_name=jgi_thaps3 chr2 ensembl transcript 1006672 1008753 . + . ID=Thaps21279;Parent=Thaps21279;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1006672 1008753 . + 0 ID=Thaps21279;Parent=Thaps21279;rank=1 chr2 . exon 1006672 1008753 . + . ID=Thaps21279.1;Parent=Thaps21279;constitutive=1;rank=1 chr2 . exon 999322 1000191 . - . ID=Thaps2433.1;Parent=Thaps2433;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1001098 1002162 . + . ID=Thaps2434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUC7];external_name=Thaps2434;logic_name=jgi_thaps3 chr2 ensembl transcript 1001098 1002162 . + . ID=Thaps2434;Parent=Thaps2434;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1001098 1002162 . + 0 ID=Thaps2434;Parent=Thaps2434;rank=1 chr2 . exon 1001098 1002162 . + . ID=Thaps2434.1;Parent=Thaps2434;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1002283 1003422 . - . ID=Thaps2435;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUC8];external_name=Thaps2435;logic_name=jgi_thaps3 chr2 ensembl transcript 1002283 1003422 . - . ID=Thaps2435;Parent=Thaps2435;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1002283 1003422 . - 0 ID=Thaps2435;Parent=Thaps2435;rank=1 chr2 . exon 1002283 1003422 . - . ID=Thaps2435.1;Parent=Thaps2435;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1003610 1004623 . + . ID=Thaps2436;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUC9];external_name=Thaps2436;logic_name=jgi_thaps3 chr2 ensembl transcript 1003610 1004623 . + . ID=Thaps2436;Parent=Thaps2436;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1003610 1004274 . + 0 ID=Thaps2436;Parent=Thaps2436;rank=1 chr2 . exon 1003610 1004274 . + . ID=Thaps2436.1;Parent=Thaps2436;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1004332 1004623 . + 0 ID=Thaps2436;Parent=Thaps2436;rank=2 chr2 . exon 1004332 1004623 . + . ID=Thaps2436.2;Parent=Thaps2436;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1004721 1006028 . - . ID=Thaps39516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD0];external_name=Thaps39516;logic_name=jgi_thaps3 chr2 ensembl transcript 1004721 1006028 . - . ID=Thaps39516;Parent=Thaps39516;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1004721 1006028 . - 0 ID=Thaps39516;Parent=Thaps39516;rank=1 chr2 . exon 1004721 1006028 . - . ID=Thaps39516.1;Parent=Thaps39516;constitutive=1;rank=1 chr2 . repeat_region 1009133 1009140 . ? . description=dust chr2 . repeat_region 1009378 1009432 . ? . description=trf chr2 . repeat_region 1014676 1014734 . ? . description=dust chr2 . repeat_region 1014702 1014734 . ? . description=trf chr2 . repeat_region 1017389 1017409 . ? . description=dust chr2 ensembl protein_coding_gene 1009027 1010035 . - . ID=Thaps21280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD2];external_name=Thaps21280;logic_name=jgi_thaps3 chr2 ensembl transcript 1009027 1010035 . - . ID=Thaps21280;Parent=Thaps21280;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1009027 1009143 . - 0 ID=Thaps21280;Parent=Thaps21280;rank=4 chr2 . exon 1009027 1009143 . - . ID=Thaps21280.4;Parent=Thaps21280;constitutive=1;rank=4 chr2 . CDS 1009228 1009269 . - 0 ID=Thaps21280;Parent=Thaps21280;rank=3 chr2 . exon 1009228 1009269 . - . ID=Thaps21280.3;Parent=Thaps21280;constitutive=1;rank=3 chr2 . CDS 1009367 1009813 . - 0 ID=Thaps21280;Parent=Thaps21280;rank=2 chr2 . exon 1009367 1009813 . - . ID=Thaps21280.2;Parent=Thaps21280;constitutive=1;rank=2 chr2 . CDS 1009931 1010035 . - 0 ID=Thaps21280;Parent=Thaps21280;rank=1 chr2 . exon 1009931 1010035 . - . ID=Thaps21280.1;Parent=Thaps21280;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1010563 1012437 . + . ID=Thaps21281;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD3];external_name=Thaps21281;logic_name=jgi_thaps3 chr2 ensembl transcript 1010563 1012437 . + . ID=Thaps21281;Parent=Thaps21281;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1010563 1012437 . + 0 ID=Thaps21281;Parent=Thaps21281;rank=1 chr2 . exon 1010563 1012437 . + . ID=Thaps21281.1;Parent=Thaps21281;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1018175 1023744 . + . ID=Thaps21282;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD7];external_name=Thaps21282;logic_name=jgi_thaps3 chr2 ensembl transcript 1018175 1023744 . + . ID=Thaps21282;Parent=Thaps21282;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1018175 1020055 . + 0 ID=Thaps21282;Parent=Thaps21282;rank=1 chr2 . exon 1018175 1020055 . + . ID=Thaps21282.1;Parent=Thaps21282;constitutive=1;rank=1 chr2 . CDS 1020142 1021443 . + 0 ID=Thaps21282;Parent=Thaps21282;rank=2 chr2 . CDS 1021985 1022243 . + 0 ID=Thaps21282;Parent=Thaps21282;rank=3 chr2 . CDS 1022288 1022349 . + 0 ID=Thaps21282;Parent=Thaps21282;rank=4 chr2 . CDS 1022402 1022694 . + 0 ID=Thaps21282;Parent=Thaps21282;rank=5 chr2 . CDS 1022807 1022876 . + 0 ID=Thaps21282;Parent=Thaps21282;rank=6 chr2 . CDS 1022975 1023011 . + 0 ID=Thaps21282;Parent=Thaps21282;rank=7 chr2 . CDS 1023097 1023186 . + 0 ID=Thaps21282;Parent=Thaps21282;rank=8 chr2 . CDS 1023266 1023744 . + 0 ID=Thaps21282;Parent=Thaps21282;rank=9 chr2 ensembl protein_coding_gene 1012760 1014086 . - . ID=Thaps2441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD4];external_name=Thaps2441;logic_name=jgi_thaps3 chr2 ensembl transcript 1012760 1014086 . - . ID=Thaps2441;Parent=Thaps2441;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1012760 1013027 . - 0 ID=Thaps2441;Parent=Thaps2441;rank=3 chr2 . exon 1012760 1013027 . - . ID=Thaps2441.3;Parent=Thaps2441;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1013399 1013726 . - 0 ID=Thaps2441;Parent=Thaps2441;rank=2 chr2 . exon 1013399 1013726 . - . ID=Thaps2441.2;Parent=Thaps2441;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1013852 1014086 . - 0 ID=Thaps2441;Parent=Thaps2441;rank=1 chr2 . exon 1013852 1014086 . - . ID=Thaps2441.1;Parent=Thaps2441;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1014247 1015902 . + . ID=Thaps2442;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD5];external_name=Thaps2442;logic_name=jgi_thaps3 chr2 ensembl transcript 1014247 1015902 . + . ID=Thaps2442;Parent=Thaps2442;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1014247 1015902 . + 0 ID=Thaps2442;Parent=Thaps2442;rank=1 chr2 . exon 1014247 1015902 . + . ID=Thaps2442.1;Parent=Thaps2442;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1016088 1017700 . - . ID=Thaps2443;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD6];external_name=Thaps2443;logic_name=jgi_thaps3 chr2 ensembl transcript 1016088 1017700 . - . ID=Thaps2443;Parent=Thaps2443;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1016088 1017362 . - 0 ID=Thaps2443;Parent=Thaps2443;rank=2 chr2 . exon 1016088 1017362 . - . ID=Thaps2443.2;Parent=Thaps2443;constitutive=1;rank=2 chr2 . CDS 1017515 1017700 . - 0 ID=Thaps2443;Parent=Thaps2443;rank=1 chr2 . exon 1017515 1017700 . - . ID=Thaps2443.1;Parent=Thaps2443;constitutive=1;rank=1 chr2 . exon 1020142 1021443 . + . ID=Thaps21282.2;Parent=Thaps21282;constitutive=1;rank=2 chr2 . exon 1021985 1022243 . + . ID=Thaps21282.3;Parent=Thaps21282;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . exon 1022288 1022349 . + . ID=Thaps21282.4;Parent=Thaps21282;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . exon 1022402 1022694 . + . ID=Thaps21282.5;Parent=Thaps21282;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . exon 1022807 1022876 . + . ID=Thaps21282.6;Parent=Thaps21282;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . exon 1022975 1023011 . + . ID=Thaps21282.7;Parent=Thaps21282;constitutive=1;ensembl_end_phase=1;rank=7 chr2 . exon 1023097 1023186 . + . ID=Thaps21282.8;Parent=Thaps21282;constitutive=1;rank=8 chr2 . exon 1023266 1023744 . + . ID=Thaps21282.9;Parent=Thaps21282;constitutive=1;ensembl_end_phase=2;rank=9 chr2 ensembl protein_coding_gene 1024047 1026737 . - . ID=Thaps21283;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD8];external_name=Thaps21283;logic_name=jgi_thaps3 chr2 ensembl transcript 1024047 1026737 . - . ID=Thaps21283;Parent=Thaps21283;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1024047 1024262 . - 0 ID=Thaps21283;Parent=Thaps21283;rank=4 chr2 . exon 1024047 1024262 . - . ID=Thaps21283.4;Parent=Thaps21283;constitutive=1;rank=4 chr2 . CDS 1024367 1024606 . - 0 ID=Thaps21283;Parent=Thaps21283;rank=3 chr2 . exon 1024367 1024606 . - . ID=Thaps21283.3;Parent=Thaps21283;constitutive=1;rank=3 chr2 . CDS 1024696 1025366 . - 0 ID=Thaps21283;Parent=Thaps21283;rank=2 chr2 . exon 1024696 1025366 . - . ID=Thaps21283.2;Parent=Thaps21283;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1025456 1026737 . - 0 ID=Thaps21283;Parent=Thaps21283;rank=1 chr2 . exon 1025456 1026737 . - . ID=Thaps21283.1;Parent=Thaps21283;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1027177 1029250 . + . ID=Thaps21284;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUD9];external_name=Thaps21284;logic_name=jgi_thaps3 chr2 ensembl transcript 1027177 1029250 . + . ID=Thaps21284;Parent=Thaps21284;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1027177 1028034 . + 0 ID=Thaps21284;Parent=Thaps21284;rank=1 chr2 . exon 1027177 1028034 . + . ID=Thaps21284.1;Parent=Thaps21284;constitutive=1;rank=1 chr2 . CDS 1028108 1029250 . + 0 ID=Thaps21284;Parent=Thaps21284;rank=2 chr2 . exon 1028108 1029250 . + . ID=Thaps21284.2;Parent=Thaps21284;constitutive=1;rank=2 chr2 . repeat_region 1031632 1031642 . ? . description=dust chr2 ensembl protein_coding_gene 1029363 1030650 . - . ID=Thaps2447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUE0];external_name=Thaps2447;logic_name=jgi_thaps3 chr2 ensembl transcript 1029363 1030650 . - . ID=Thaps2447;Parent=Thaps2447;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1029363 1029606 . - 0 ID=Thaps2447;Parent=Thaps2447;rank=3 chr2 . exon 1029363 1029606 . - . ID=Thaps2447.3;Parent=Thaps2447;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1029683 1030556 . - 0 ID=Thaps2447;Parent=Thaps2447;rank=2 chr2 . exon 1029683 1030556 . - . ID=Thaps2447.2;Parent=Thaps2447;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1030611 1030650 . - 0 ID=Thaps2447;Parent=Thaps2447;rank=1 chr2 . exon 1030611 1030650 . - . ID=Thaps2447.1;Parent=Thaps2447;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1032180 1034543 . + . ID=Thaps39520;biotype=protein_coding;description=Vacuolar membrane proton pump%2C inorganic pyrophosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BUE1];external_name=Thaps39520;logic_name=jgi_thaps3 chr2 ensembl transcript 1032180 1034543 . + . ID=Thaps39520;Parent=Thaps39520;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1032180 1032312 . + 0 ID=Thaps39520;Parent=Thaps39520;rank=1 chr2 . exon 1032180 1032312 . + . ID=Thaps39520.1;Parent=Thaps39520;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1032431 1032807 . + 0 ID=Thaps39520;Parent=Thaps39520;rank=2 chr2 . exon 1032431 1032807 . + . ID=Thaps39520.2;Parent=Thaps39520;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1032891 1033744 . + 0 ID=Thaps39520;Parent=Thaps39520;rank=3 chr2 . exon 1032891 1033744 . + . ID=Thaps39520.3;Parent=Thaps39520;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1033822 1034255 . + 0 ID=Thaps39520;Parent=Thaps39520;rank=4 chr2 . exon 1033822 1034255 . + . ID=Thaps39520.4;Parent=Thaps39520;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1034335 1034543 . + 0 ID=Thaps39520;Parent=Thaps39520;rank=5 chr2 . exon 1034335 1034543 . + . ID=Thaps39520.5;Parent=Thaps39520;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . repeat_region 1045918 1045951 . ? . description=trf chr2 . repeat_region 1045919 1045953 . ? . description=trf chr2 ensembl protein_coding_gene 1042034 1043836 . + . ID=Thaps2451;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUE2];external_name=Thaps2451;logic_name=jgi_thaps3 chr2 ensembl transcript 1042034 1043836 . + . ID=Thaps2451;Parent=Thaps2451;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1042034 1042384 . + 0 ID=Thaps2451;Parent=Thaps2451;rank=1 chr2 . exon 1042034 1042384 . + . ID=Thaps2451.1;Parent=Thaps2451;constitutive=1;rank=1 chr2 . CDS 1042465 1043218 . + 0 ID=Thaps2451;Parent=Thaps2451;rank=2 chr2 . exon 1042465 1043218 . + . ID=Thaps2451.2;Parent=Thaps2451;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1043301 1043430 . + 0 ID=Thaps2451;Parent=Thaps2451;rank=3 chr2 . exon 1043301 1043430 . + . ID=Thaps2451.3;Parent=Thaps2451;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1043503 1043836 . + 0 ID=Thaps2451;Parent=Thaps2451;rank=4 chr2 . exon 1043503 1043836 . + . ID=Thaps2451.4;Parent=Thaps2451;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 1044731 1045898 . - . ID=Thaps2452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUE4];external_name=Thaps2452;logic_name=jgi_thaps3 chr2 ensembl transcript 1044731 1045898 . - . ID=Thaps2452;Parent=Thaps2452;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1044731 1044934 . - 0 ID=Thaps2452;Parent=Thaps2452;rank=5 chr2 . exon 1044731 1044934 . - . ID=Thaps2452.5;Parent=Thaps2452;constitutive=1;rank=5 chr2 . CDS 1045002 1045017 . - 0 ID=Thaps2452;Parent=Thaps2452;rank=4 chr2 . exon 1045002 1045017 . - . ID=Thaps2452.4;Parent=Thaps2452;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1045340 1045581 . - 0 ID=Thaps2452;Parent=Thaps2452;rank=3 chr2 . exon 1045340 1045581 . - . ID=Thaps2452.3;Parent=Thaps2452;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1045632 1045682 . - 0 ID=Thaps2452;Parent=Thaps2452;rank=2 chr2 . exon 1045632 1045682 . - . ID=Thaps2452.2;Parent=Thaps2452;constitutive=1;rank=2 chr2 . CDS 1045758 1045898 . - 0 ID=Thaps2452;Parent=Thaps2452;rank=1 chr2 . exon 1045758 1045898 . - . ID=Thaps2452.1;Parent=Thaps2452;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1048533 1049396 . - . ID=Thaps2454;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUE6];external_name=Thaps2454;logic_name=jgi_thaps3 chr2 ensembl transcript 1048533 1049396 . - . ID=Thaps2454;Parent=Thaps2454;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1048533 1049028 . - 0 ID=Thaps2454;Parent=Thaps2454;rank=3 chr2 . exon 1048533 1049028 . - . ID=Thaps2454.3;Parent=Thaps2454;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1049165 1049277 . - 0 ID=Thaps2454;Parent=Thaps2454;rank=2 chr2 . CDS 1049379 1049396 . - 0 ID=Thaps2454;Parent=Thaps2454;rank=1 chr2 ensembl protein_coding_gene 1047362 1048222 . + . ID=Thaps32139;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUE5];external_name=Thaps32139;logic_name=jgi_thaps3 chr2 ensembl transcript 1047362 1048222 . + . ID=Thaps32139;Parent=Thaps32139;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1047362 1047733 . + 0 ID=Thaps32139;Parent=Thaps32139;rank=1 chr2 . exon 1047362 1047733 . + . ID=Thaps32139.1;Parent=Thaps32139;constitutive=1;rank=1 chr2 . CDS 1047779 1048222 . + 0 ID=Thaps32139;Parent=Thaps32139;rank=2 chr2 . exon 1047779 1048222 . + . ID=Thaps32139.2;Parent=Thaps32139;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1043852 1044364 . - . ID=Thaps32229;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUE3];external_name=Thaps32229;logic_name=jgi_thaps3 chr2 ensembl transcript 1043852 1044364 . - . ID=Thaps32229;Parent=Thaps32229;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1043852 1044364 . - 0 ID=Thaps32229;Parent=Thaps32229;rank=1 chr2 . exon 1043852 1044364 . - . ID=Thaps32229.1;Parent=Thaps32229;constitutive=1;rank=1 chr2 . repeat_region 1052761 1052768 . ? . description=dust chr2 . repeat_region 1053241 1053268 . ? . description=dust chr2 ensembl protein_coding_gene 1051462 1051716 . - . ID=Thaps19637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUE8];external_name=Thaps19637;logic_name=jgi_thaps3 chr2 ensembl transcript 1051462 1051716 . - . ID=Thaps19637;Parent=Thaps19637;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1051462 1051716 . - 0 ID=Thaps19637;Parent=Thaps19637;rank=1 chr2 . exon 1051462 1051716 . - . ID=Thaps19637.1;Parent=Thaps19637;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1052678 1053230 . - . ID=Thaps21288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUE9];external_name=Thaps21288;logic_name=jgi_thaps3 chr2 ensembl transcript 1052678 1053230 . - . ID=Thaps21288;Parent=Thaps21288;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1052678 1052908 . - 0 ID=Thaps21288;Parent=Thaps21288;rank=2 chr2 . exon 1052678 1052908 . - . ID=Thaps21288.2;Parent=Thaps21288;constitutive=1;rank=2 chr2 . CDS 1053051 1053230 . - 0 ID=Thaps21288;Parent=Thaps21288;rank=1 chr2 . exon 1053051 1053230 . - . ID=Thaps21288.1;Parent=Thaps21288;constitutive=1;rank=1 chr2 . exon 1049165 1049277 . - . ID=Thaps2454.2;Parent=Thaps2454;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . exon 1049379 1049396 . - . ID=Thaps2454.1;Parent=Thaps2454;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1049730 1051195 . + . ID=Thaps2455;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUE7];external_name=Thaps2455;logic_name=jgi_thaps3 chr2 ensembl transcript 1049730 1051195 . + . ID=Thaps2455;Parent=Thaps2455;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1049730 1049755 . + 0 ID=Thaps2455;Parent=Thaps2455;rank=1 chr2 . exon 1049730 1049755 . + . ID=Thaps2455.1;Parent=Thaps2455;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1049860 1051195 . + 0 ID=Thaps2455;Parent=Thaps2455;rank=2 chr2 . exon 1049860 1051195 . + . ID=Thaps2455.2;Parent=Thaps2455;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1055619 1057727 . - . ID=Thaps268266;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUF0];external_name=Thaps268266;logic_name=jgi_thaps3 chr2 ensembl transcript 1055619 1057727 . - . ID=Thaps268266;Parent=Thaps268266;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1055619 1055984 . - 0 ID=Thaps268266;Parent=Thaps268266;rank=4 chr2 . exon 1055619 1055984 . - . ID=Thaps268266.4;Parent=Thaps268266;constitutive=1;rank=4 chr2 . CDS 1056069 1056866 . - 0 ID=Thaps268266;Parent=Thaps268266;rank=3 chr2 . exon 1056069 1056866 . - . ID=Thaps268266.3;Parent=Thaps268266;constitutive=1;rank=3 chr2 . CDS 1056939 1057135 . - 0 ID=Thaps268266;Parent=Thaps268266;rank=2 chr2 . exon 1056939 1057135 . - . ID=Thaps268266.2;Parent=Thaps268266;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1057220 1057727 . - 0 ID=Thaps268266;Parent=Thaps268266;rank=1 chr2 . exon 1057220 1057727 . - . ID=Thaps268266.1;Parent=Thaps268266;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 1062813 1062838 . ? . description=trf chr2 ensembl protein_coding_gene 1062674 1063642 . - . ID=Thaps2462;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUF3];external_name=Thaps2462;logic_name=jgi_thaps3 chr2 ensembl transcript 1062674 1063642 . - . ID=Thaps2462;Parent=Thaps2462;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1062674 1063366 . - 0 ID=Thaps2462;Parent=Thaps2462;rank=2 chr2 . exon 1062674 1063366 . - . ID=Thaps2462.2;Parent=Thaps2462;constitutive=1;rank=2 chr2 . CDS 1063433 1063642 . - 0 ID=Thaps2462;Parent=Thaps2462;rank=1 chr2 . exon 1063433 1063642 . - . ID=Thaps2462.1;Parent=Thaps2462;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1064192 1064941 . - . ID=Thaps2463;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUF4];external_name=Thaps2463;logic_name=jgi_thaps3 chr2 ensembl transcript 1064192 1064941 . - . ID=Thaps2463;Parent=Thaps2463;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1064192 1064941 . - 0 ID=Thaps2463;Parent=Thaps2463;rank=1 chr2 . exon 1064192 1064941 . - . ID=Thaps2463.1;Parent=Thaps2463;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1067209 1070634 . - . ID=Thaps2465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUF6];external_name=Thaps2465;logic_name=jgi_thaps3 chr2 ensembl transcript 1067209 1070634 . - . ID=Thaps2465;Parent=Thaps2465;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1067209 1067766 . - 0 ID=Thaps2465;Parent=Thaps2465;rank=5 chr2 . exon 1067209 1067766 . - . ID=Thaps2465.5;Parent=Thaps2465;constitutive=1;rank=5 chr2 . CDS 1067854 1067942 . - 0 ID=Thaps2465;Parent=Thaps2465;rank=4 chr2 . exon 1067854 1067942 . - . ID=Thaps2465.4;Parent=Thaps2465;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1068022 1068175 . - 0 ID=Thaps2465;Parent=Thaps2465;rank=3 chr2 . exon 1068022 1068175 . - . ID=Thaps2465.3;Parent=Thaps2465;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1068260 1068826 . - 0 ID=Thaps2465;Parent=Thaps2465;rank=2 chr2 . exon 1068260 1068826 . - . ID=Thaps2465.2;Parent=Thaps2465;constitutive=1;rank=2 chr2 . CDS 1068913 1070634 . - 0 ID=Thaps2465;Parent=Thaps2465;rank=1 chr2 . exon 1068913 1070634 . - . ID=Thaps2465.1;Parent=Thaps2465;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1059388 1060899 . + . ID=Thaps31932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUF1];external_name=Thaps31932;logic_name=jgi_thaps3 chr2 ensembl transcript 1059388 1060899 . + . ID=Thaps31932;Parent=Thaps31932;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1059388 1060899 . + 0 ID=Thaps31932;Parent=Thaps31932;rank=1 chr2 . exon 1059388 1060899 . + . ID=Thaps31932.1;Parent=Thaps31932;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1066222 1067048 . - . ID=Thaps32252;biotype=protein_coding;description=Ribose-5-phosphate isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BUF5];external_name=RPI2;logic_name=jgi_thaps3 chr2 ensembl transcript 1066222 1067048 . - . ID=Thaps32252;Parent=Thaps32252;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1066222 1066583 . - 0 ID=Thaps32252;Parent=Thaps32252;rank=2 chr2 . exon 1066222 1066583 . - . ID=Thaps32252.2;Parent=Thaps32252;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1066682 1067048 . - 0 ID=Thaps32252;Parent=Thaps32252;rank=1 chr2 . exon 1066682 1067048 . - . ID=Thaps32252.1;Parent=Thaps32252;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1061326 1062262 . + . ID=Thaps32332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUF2];external_name=Thaps32332;logic_name=jgi_thaps3 chr2 ensembl transcript 1061326 1062262 . + . ID=Thaps32332;Parent=Thaps32332;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1061326 1061695 . + 0 ID=Thaps32332;Parent=Thaps32332;rank=1 chr2 . exon 1061326 1061695 . + . ID=Thaps32332.1;Parent=Thaps32332;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1061816 1061852 . + 0 ID=Thaps32332;Parent=Thaps32332;rank=2 chr2 . exon 1061816 1061852 . + . ID=Thaps32332.2;Parent=Thaps32332;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1061938 1062262 . + 0 ID=Thaps32332;Parent=Thaps32332;rank=3 chr2 . exon 1061938 1062262 . + . ID=Thaps32332.3;Parent=Thaps32332;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 1070851 1072299 . + . ID=Thaps21290;biotype=protein_coding;description=N-acetyl-gamma-glutamyl-phosphate reductase%2C urea cycle [Source:UniProtKB/TrEMBL%3BAcc:B8BUF7];external_name=AGPR;logic_name=jgi_thaps3 chr2 ensembl transcript 1070851 1072299 . + . ID=Thaps21290;Parent=Thaps21290;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1070851 1071136 . + 0 ID=Thaps21290;Parent=Thaps21290;rank=1 chr2 . exon 1070851 1071136 . + . ID=Thaps21290.1;Parent=Thaps21290;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1071243 1071268 . + 0 ID=Thaps21290;Parent=Thaps21290;rank=2 chr2 . exon 1071243 1071268 . + . ID=Thaps21290.2;Parent=Thaps21290;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1071360 1071450 . + 0 ID=Thaps21290;Parent=Thaps21290;rank=3 chr2 . exon 1071360 1071450 . + . ID=Thaps21290.3;Parent=Thaps21290;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1071541 1071776 . + 0 ID=Thaps21290;Parent=Thaps21290;rank=4 chr2 . exon 1071541 1071776 . + . ID=Thaps21290.4;Parent=Thaps21290;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1071865 1072299 . + 0 ID=Thaps21290;Parent=Thaps21290;rank=5 chr2 . exon 1071865 1072299 . + . ID=Thaps21290.5;Parent=Thaps21290;constitutive=1;rank=5 chr2 ensembl protein_coding_gene 1074144 1078366 . + . ID=Thaps21291;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUF9];external_name=Thaps21291;logic_name=jgi_thaps3 chr2 ensembl transcript 1074144 1078366 . + . ID=Thaps21291;Parent=Thaps21291;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1074144 1074977 . + 0 ID=Thaps21291;Parent=Thaps21291;rank=1 chr2 . exon 1074144 1074977 . + . ID=Thaps21291.1;Parent=Thaps21291;constitutive=1;rank=1 chr2 . CDS 1075059 1076071 . + 0 ID=Thaps21291;Parent=Thaps21291;rank=2 chr2 . exon 1075059 1076071 . + . ID=Thaps21291.2;Parent=Thaps21291;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1076167 1077691 . + 0 ID=Thaps21291;Parent=Thaps21291;rank=3 chr2 . exon 1076167 1077691 . + . ID=Thaps21291.3;Parent=Thaps21291;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1077777 1077956 . + 0 ID=Thaps21291;Parent=Thaps21291;rank=4 chr2 . exon 1077777 1077956 . + . ID=Thaps21291.4;Parent=Thaps21291;constitutive=1;rank=4 chr2 . CDS 1078034 1078366 . + 0 ID=Thaps21291;Parent=Thaps21291;rank=5 chr2 . exon 1078034 1078366 . + . ID=Thaps21291.5;Parent=Thaps21291;constitutive=1;rank=5 chr2 ensembl protein_coding_gene 1072422 1073874 . - . ID=Thaps2467;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUF8];external_name=Thaps2467;logic_name=jgi_thaps3 chr2 ensembl transcript 1072422 1073874 . - . ID=Thaps2467;Parent=Thaps2467;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1072422 1072963 . - 0 ID=Thaps2467;Parent=Thaps2467;rank=5 chr2 . exon 1072422 1072963 . - . ID=Thaps2467.5;Parent=Thaps2467;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1072999 1073088 . - 0 ID=Thaps2467;Parent=Thaps2467;rank=4 chr2 . exon 1072999 1073088 . - . ID=Thaps2467.4;Parent=Thaps2467;constitutive=1;rank=4 chr2 . CDS 1073178 1073367 . - 0 ID=Thaps2467;Parent=Thaps2467;rank=3 chr2 . exon 1073178 1073367 . - . ID=Thaps2467.3;Parent=Thaps2467;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1073454 1073720 . - 0 ID=Thaps2467;Parent=Thaps2467;rank=2 chr2 . exon 1073454 1073720 . - . ID=Thaps2467.2;Parent=Thaps2467;constitutive=1;rank=2 chr2 . CDS 1073776 1073874 . - 0 ID=Thaps2467;Parent=Thaps2467;rank=1 chr2 . exon 1073776 1073874 . - . ID=Thaps2467.1;Parent=Thaps2467;constitutive=1;rank=1 chr2 . repeat_region 1083173 1083180 . ? . description=dust chr2 . repeat_region 1083672 1083821 . + . description=TE2a_TP chr2 ensembl protein_coding_gene 1079352 1081286 . - . ID=Thaps21292;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUG0];external_name=Thaps21292;logic_name=jgi_thaps3 chr2 ensembl transcript 1079352 1081286 . - . ID=Thaps21292;Parent=Thaps21292;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1079352 1081286 . - 0 ID=Thaps21292;Parent=Thaps21292;rank=1 chr2 . exon 1079352 1081286 . - . ID=Thaps21292.1;Parent=Thaps21292;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1086424 1087238 . + . ID=Thaps261381;biotype=protein_coding;description=Canine-like rab-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUG2];external_name=Thaps261381;logic_name=jgi_thaps3 chr2 ensembl transcript 1086424 1087238 . + . ID=Thaps261381;Parent=Thaps261381;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1086424 1086547 . + 0 ID=Thaps261381;Parent=Thaps261381;rank=1 chr2 . exon 1086424 1086547 . + . ID=Thaps261381.1;Parent=Thaps261381;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1086682 1086908 . + 0 ID=Thaps261381;Parent=Thaps261381;rank=2 chr2 . exon 1086682 1086908 . + . ID=Thaps261381.2;Parent=Thaps261381;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1087008 1087238 . + 0 ID=Thaps261381;Parent=Thaps261381;rank=3 chr2 . exon 1087008 1087238 . + . ID=Thaps261381.3;Parent=Thaps261381;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1088047 1089009 . + . ID=Thaps32145;biotype=protein_coding;description=Acyl desaturase/hydroxylase [Source:UniProtKB/TrEMBL%3BAcc:B8BUG3];external_name=Thaps32145;logic_name=jgi_thaps3 chr2 ensembl transcript 1088047 1089009 . + . ID=Thaps32145;Parent=Thaps32145;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1088047 1089009 . + 0 ID=Thaps32145;Parent=Thaps32145;rank=1 chr2 . exon 1088047 1089009 . + . ID=Thaps32145.1;Parent=Thaps32145;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1084301 1084903 . - . ID=Thaps32158;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUG1];external_name=Thaps32158;logic_name=jgi_thaps3 chr2 ensembl transcript 1084301 1084903 . - . ID=Thaps32158;Parent=Thaps32158;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1084301 1084903 . - 0 ID=Thaps32158;Parent=Thaps32158;rank=1 chr2 . exon 1084301 1084903 . - . ID=Thaps32158.1;Parent=Thaps32158;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1091733 1092411 . - . ID=Thaps21295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUG5];external_name=Thaps21295;logic_name=jgi_thaps3 chr2 ensembl transcript 1091733 1092411 . - . ID=Thaps21295;Parent=Thaps21295;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1091733 1091857 . - 0 ID=Thaps21295;Parent=Thaps21295;rank=2 chr2 . exon 1091733 1091857 . - . ID=Thaps21295.2;Parent=Thaps21295;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1092051 1092411 . - 0 ID=Thaps21295;Parent=Thaps21295;rank=1 chr2 . exon 1092051 1092411 . - . ID=Thaps21295.1;Parent=Thaps21295;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1092637 1093097 . + . ID=Thaps261384;biotype=protein_coding;description=Niemann-pick C type protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUG6];external_name=Thaps261384;logic_name=jgi_thaps3 chr2 ensembl transcript 1092637 1093097 . + . ID=Thaps261384;Parent=Thaps261384;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1092637 1093097 . + 0 ID=Thaps261384;Parent=Thaps261384;rank=1 chr2 . exon 1092637 1093097 . + . ID=Thaps261384.1;Parent=Thaps261384;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1093651 1095813 . + . ID=Thaps268270;biotype=protein_coding;description=Niemann-pick C type protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUG7];external_name=Thaps268270;logic_name=jgi_thaps3 chr2 ensembl transcript 1093651 1095813 . + . ID=Thaps268270;Parent=Thaps268270;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1093651 1093759 . + 0 ID=Thaps268270;Parent=Thaps268270;rank=1 chr2 . exon 1093651 1093759 . + . ID=Thaps268270.1;Parent=Thaps268270;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1093865 1094934 . + 0 ID=Thaps268270;Parent=Thaps268270;rank=2 chr2 . exon 1093865 1094934 . + . ID=Thaps268270.2;Parent=Thaps268270;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1095022 1095103 . + 0 ID=Thaps268270;Parent=Thaps268270;rank=3 chr2 . exon 1095022 1095103 . + . ID=Thaps268270.3;Parent=Thaps268270;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1095179 1095813 . + 0 ID=Thaps268270;Parent=Thaps268270;rank=4 chr2 . exon 1095179 1095813 . + . ID=Thaps268270.4;Parent=Thaps268270;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 1096265 1098043 . + . ID=Thaps268271;biotype=protein_coding;description=Signal recognition particle 54 kDa subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BUG8];external_name=Thaps268271;logic_name=jgi_thaps3 chr2 ensembl transcript 1096265 1098043 . + . ID=Thaps268271;Parent=Thaps268271;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1096265 1096326 . + 0 ID=Thaps268271;Parent=Thaps268271;rank=1 chr2 . exon 1096265 1096326 . + . ID=Thaps268271.1;Parent=Thaps268271;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1096445 1096671 . + 0 ID=Thaps268271;Parent=Thaps268271;rank=2 chr2 . exon 1096445 1096671 . + . ID=Thaps268271.2;Parent=Thaps268271;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1096702 1096801 . + 0 ID=Thaps268271;Parent=Thaps268271;rank=3 chr2 . exon 1096702 1096801 . + . ID=Thaps268271.3;Parent=Thaps268271;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1096880 1097145 . + 0 ID=Thaps268271;Parent=Thaps268271;rank=4 chr2 . exon 1096880 1097145 . + . ID=Thaps268271.4;Parent=Thaps268271;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1097238 1098043 . + 0 ID=Thaps268271;Parent=Thaps268271;rank=5 chr2 . exon 1097238 1098043 . + . ID=Thaps268271.5;Parent=Thaps268271;constitutive=1;ensembl_end_phase=2;rank=5 chr2 ensembl protein_coding_gene 1089226 1090889 . - . ID=Thaps27083;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUG4];external_name=Thaps27083;logic_name=jgi_thaps3 chr2 ensembl transcript 1089226 1090889 . - . ID=Thaps27083;Parent=Thaps27083;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1089226 1089943 . - 0 ID=Thaps27083;Parent=Thaps27083;rank=4 chr2 . exon 1089226 1089943 . - . ID=Thaps27083.4;Parent=Thaps27083;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1090016 1090193 . - 0 ID=Thaps27083;Parent=Thaps27083;rank=3 chr2 . exon 1090016 1090193 . - . ID=Thaps27083.3;Parent=Thaps27083;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1090293 1090431 . - 0 ID=Thaps27083;Parent=Thaps27083;rank=2 chr2 . exon 1090293 1090431 . - . ID=Thaps27083.2;Parent=Thaps27083;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1090527 1090889 . - 0 ID=Thaps27083;Parent=Thaps27083;rank=1 chr2 . exon 1090527 1090889 . - . ID=Thaps27083.1;Parent=Thaps27083;constitutive=1;rank=1 chr2 . repeat_region 1099234 1099310 . + . description=TE2c_TP chr2 . repeat_region 1099357 1100126 . + . description=TE1A_TP chr2 ensembl protein_coding_gene 1101233 1103673 . - . ID=Thaps21299;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUH0];external_name=Thaps21299;logic_name=jgi_thaps3 chr2 ensembl transcript 1101233 1103673 . - . ID=Thaps21299;Parent=Thaps21299;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1101233 1101340 . - 0 ID=Thaps21299;Parent=Thaps21299;rank=5 chr2 . exon 1101233 1101340 . - . ID=Thaps21299.5;Parent=Thaps21299;constitutive=1;rank=5 chr2 . CDS 1101421 1101512 . - 0 ID=Thaps21299;Parent=Thaps21299;rank=4 chr2 . exon 1101421 1101512 . - . ID=Thaps21299.4;Parent=Thaps21299;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1101587 1102482 . - 0 ID=Thaps21299;Parent=Thaps21299;rank=3 chr2 . exon 1101587 1102482 . - . ID=Thaps21299.3;Parent=Thaps21299;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1102560 1102981 . - 0 ID=Thaps21299;Parent=Thaps21299;rank=2 chr2 . exon 1102560 1102981 . - . ID=Thaps21299.2;Parent=Thaps21299;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1103050 1103673 . - 0 ID=Thaps21299;Parent=Thaps21299;rank=1 chr2 . exon 1103050 1103673 . - . ID=Thaps21299.1;Parent=Thaps21299;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1107643 1108849 . + . ID=Thaps21300;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUH2];external_name=Thaps21300;logic_name=jgi_thaps3 chr2 ensembl transcript 1107643 1108849 . + . ID=Thaps21300;Parent=Thaps21300;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1107643 1107757 . + 0 ID=Thaps21300;Parent=Thaps21300;rank=1 chr2 . exon 1107643 1107757 . + . ID=Thaps21300.1;Parent=Thaps21300;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1107915 1108849 . + 0 ID=Thaps21300;Parent=Thaps21300;rank=2 chr2 . exon 1107915 1108849 . + . ID=Thaps21300.2;Parent=Thaps21300;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1105550 1107052 . - . ID=Thaps2479;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUH1];external_name=Thaps2479;logic_name=jgi_thaps3 chr2 ensembl transcript 1105550 1107052 . - . ID=Thaps2479;Parent=Thaps2479;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1105550 1107052 . - 0 ID=Thaps2479;Parent=Thaps2479;rank=1 chr2 . exon 1105550 1107052 . - . ID=Thaps2479.1;Parent=Thaps2479;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1100205 1101101 . + . ID=Thaps261387;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUG9];external_name=Thaps261387;logic_name=jgi_thaps3 chr2 ensembl transcript 1100205 1101101 . + . ID=Thaps261387;Parent=Thaps261387;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1100205 1100682 . + 0 ID=Thaps261387;Parent=Thaps261387;rank=1 chr2 . exon 1100205 1100682 . + . ID=Thaps261387.1;Parent=Thaps261387;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1100759 1100883 . + 0 ID=Thaps261387;Parent=Thaps261387;rank=2 chr2 . exon 1100759 1100883 . + . ID=Thaps261387.2;Parent=Thaps261387;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1100973 1101101 . + 0 ID=Thaps261387;Parent=Thaps261387;rank=3 chr2 . exon 1100973 1101101 . + . ID=Thaps261387.3;Parent=Thaps261387;constitutive=1;rank=3 chr2 . repeat_region 1113326 1113346 . ? . description=dust chr2 . repeat_region 1114636 1114644 . ? . description=dust chr2 ensembl protein_coding_gene 1109066 1111555 . + . ID=Thaps2481;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUH3];external_name=Thaps2481;logic_name=jgi_thaps3 chr2 ensembl transcript 1109066 1111555 . + . ID=Thaps2481;Parent=Thaps2481;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1109066 1109290 . + 0 ID=Thaps2481;Parent=Thaps2481;rank=1 chr2 . exon 1109066 1109290 . + . ID=Thaps2481.1;Parent=Thaps2481;constitutive=1;rank=1 chr2 . CDS 1109385 1110104 . + 0 ID=Thaps2481;Parent=Thaps2481;rank=2 chr2 . exon 1109385 1110104 . + . ID=Thaps2481.2;Parent=Thaps2481;constitutive=1;rank=2 chr2 . CDS 1110199 1110311 . + 0 ID=Thaps2481;Parent=Thaps2481;rank=3 chr2 . exon 1110199 1110311 . + . ID=Thaps2481.3;Parent=Thaps2481;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1110412 1110553 . + 0 ID=Thaps2481;Parent=Thaps2481;rank=4 chr2 . exon 1110412 1110553 . + . ID=Thaps2481.4;Parent=Thaps2481;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1110581 1110626 . + 0 ID=Thaps2481;Parent=Thaps2481;rank=5 chr2 . exon 1110581 1110626 . + . ID=Thaps2481.5;Parent=Thaps2481;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 1110693 1111555 . + 0 ID=Thaps2481;Parent=Thaps2481;rank=6 chr2 . exon 1110693 1111555 . + . ID=Thaps2481.6;Parent=Thaps2481;constitutive=1;ensembl_end_phase=2;rank=6 chr2 ensembl protein_coding_gene 1114834 1116335 . + . ID=Thaps2483;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUH6];external_name=Thaps2483;logic_name=jgi_thaps3 chr2 ensembl transcript 1114834 1116335 . + . ID=Thaps2483;Parent=Thaps2483;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1114834 1115034 . + 0 ID=Thaps2483;Parent=Thaps2483;rank=1 chr2 . exon 1114834 1115034 . + . ID=Thaps2483.1;Parent=Thaps2483;constitutive=1;rank=1 chr2 . CDS 1115101 1115485 . + 0 ID=Thaps2483;Parent=Thaps2483;rank=2 chr2 . exon 1115101 1115485 . + . ID=Thaps2483.2;Parent=Thaps2483;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1115560 1115805 . + 0 ID=Thaps2483;Parent=Thaps2483;rank=3 chr2 . exon 1115560 1115805 . + . ID=Thaps2483.3;Parent=Thaps2483;constitutive=1;rank=3 chr2 . CDS 1115883 1116280 . + 0 ID=Thaps2483;Parent=Thaps2483;rank=4 chr2 . exon 1115883 1116280 . + . ID=Thaps2483.4;Parent=Thaps2483;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1116324 1116335 . + 0 ID=Thaps2483;Parent=Thaps2483;rank=5 chr2 . exon 1116324 1116335 . + . ID=Thaps2483.5;Parent=Thaps2483;constitutive=1;rank=5 chr2 ensembl protein_coding_gene 1116468 1117601 . - . ID=Thaps2484;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUH7];external_name=Thaps2484;logic_name=jgi_thaps3 chr2 ensembl transcript 1116468 1117601 . - . ID=Thaps2484;Parent=Thaps2484;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1116468 1117601 . - 0 ID=Thaps2484;Parent=Thaps2484;rank=1 chr2 . exon 1116468 1117601 . - . ID=Thaps2484.1;Parent=Thaps2484;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1117994 1119638 . + . ID=Thaps261390;biotype=protein_coding;description=Zeaxanthin epoxidase [Source:UniProtKB/TrEMBL%3BAcc:B8BUH8];external_name=Thaps261390;logic_name=jgi_thaps3 chr2 ensembl transcript 1117994 1119638 . + . ID=Thaps261390;Parent=Thaps261390;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1117994 1118447 . + 0 ID=Thaps261390;Parent=Thaps261390;rank=1 chr2 . exon 1117994 1118447 . + . ID=Thaps261390.1;Parent=Thaps261390;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1118548 1119006 . + 0 ID=Thaps261390;Parent=Thaps261390;rank=2 chr2 . exon 1118548 1119006 . + . ID=Thaps261390.2;Parent=Thaps261390;constitutive=1;rank=2 chr2 . CDS 1119052 1119207 . + 0 ID=Thaps261390;Parent=Thaps261390;rank=3 chr2 . CDS 1119282 1119638 . + 0 ID=Thaps261390;Parent=Thaps261390;rank=4 chr2 ensembl protein_coding_gene 1113145 1114167 . - . ID=Thaps32347;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUH5];external_name=Thaps32347;logic_name=jgi_thaps3 chr2 ensembl transcript 1113145 1114167 . - . ID=Thaps32347;Parent=Thaps32347;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1113145 1113237 . - 0 ID=Thaps32347;Parent=Thaps32347;rank=4 chr2 . exon 1113145 1113237 . - . ID=Thaps32347.4;Parent=Thaps32347;constitutive=1;rank=4 chr2 . CDS 1113345 1113730 . - 0 ID=Thaps32347;Parent=Thaps32347;rank=3 chr2 . exon 1113345 1113730 . - . ID=Thaps32347.3;Parent=Thaps32347;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1113818 1113877 . - 0 ID=Thaps32347;Parent=Thaps32347;rank=2 chr2 . exon 1113818 1113877 . - . ID=Thaps32347.2;Parent=Thaps32347;constitutive=1;rank=2 chr2 . CDS 1113966 1114167 . - 0 ID=Thaps32347;Parent=Thaps32347;rank=1 chr2 . exon 1113966 1114167 . - . ID=Thaps32347.1;Parent=Thaps32347;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1111900 1113039 . - . ID=Thaps32493;biotype=protein_coding;description=Aldo-keto oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8BUH4];external_name=Thaps32493;logic_name=jgi_thaps3 chr2 ensembl transcript 1111900 1113039 . - . ID=Thaps32493;Parent=Thaps32493;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1111900 1112236 . - 0 ID=Thaps32493;Parent=Thaps32493;rank=3 chr2 . exon 1111900 1112236 . - . ID=Thaps32493.3;Parent=Thaps32493;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1112317 1112558 . - 0 ID=Thaps32493;Parent=Thaps32493;rank=2 chr2 . exon 1112317 1112558 . - . ID=Thaps32493.2;Parent=Thaps32493;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1112752 1113039 . - 0 ID=Thaps32493;Parent=Thaps32493;rank=1 chr2 . exon 1112752 1113039 . - . ID=Thaps32493.1;Parent=Thaps32493;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1121363 1125234 . + . ID=Thaps2487;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI0];external_name=Thaps2487;logic_name=jgi_thaps3 chr2 ensembl transcript 1121363 1125234 . + . ID=Thaps2487;Parent=Thaps2487;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1121363 1124794 . + 0 ID=Thaps2487;Parent=Thaps2487;rank=1 chr2 . exon 1121363 1124794 . + . ID=Thaps2487.1;Parent=Thaps2487;constitutive=1;rank=1 chr2 . CDS 1124866 1125234 . + 0 ID=Thaps2487;Parent=Thaps2487;rank=2 chr2 . exon 1124866 1125234 . + . ID=Thaps2487.2;Parent=Thaps2487;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1125363 1126418 . - . ID=Thaps2488;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI1];external_name=Thaps2488;logic_name=jgi_thaps3 chr2 ensembl transcript 1125363 1126418 . - . ID=Thaps2488;Parent=Thaps2488;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1125363 1126418 . - 0 ID=Thaps2488;Parent=Thaps2488;rank=1 chr2 . exon 1125363 1126418 . - . ID=Thaps2488.1;Parent=Thaps2488;constitutive=1;rank=1 chr2 . exon 1119052 1119207 . + . ID=Thaps261390.3;Parent=Thaps261390;constitutive=1;rank=3 chr2 . exon 1119282 1119638 . + . ID=Thaps261390.4;Parent=Thaps261390;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 1120361 1120810 . - . ID=Thaps32316;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUH9];external_name=Thaps32316;logic_name=jgi_thaps3 chr2 ensembl transcript 1120361 1120810 . - . ID=Thaps32316;Parent=Thaps32316;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1120361 1120527 . - 0 ID=Thaps32316;Parent=Thaps32316;rank=2 chr2 . exon 1120361 1120527 . - . ID=Thaps32316.2;Parent=Thaps32316;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1120597 1120810 . - 0 ID=Thaps32316;Parent=Thaps32316;rank=1 chr2 . exon 1120597 1120810 . - . ID=Thaps32316.1;Parent=Thaps32316;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1127059 1127630 . + . ID=Thaps39536;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI2];external_name=Thaps39536;logic_name=jgi_thaps3 chr2 ensembl transcript 1127059 1127630 . + . ID=Thaps39536;Parent=Thaps39536;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1127059 1127100 . + 0 ID=Thaps39536;Parent=Thaps39536;rank=1 chr2 . exon 1127059 1127100 . + . ID=Thaps39536.1;Parent=Thaps39536;constitutive=1;rank=1 chr2 . CDS 1127334 1127630 . + 0 ID=Thaps39536;Parent=Thaps39536;rank=2 chr2 . exon 1127334 1127630 . + . ID=Thaps39536.2;Parent=Thaps39536;constitutive=1;rank=2 chr2 . repeat_region 1129001 1129040 . ? . description=dust chr2 . repeat_region 1133544 1133580 . ? . description=dust chr2 . repeat_region 1135215 1135222 . ? . description=dust chr2 ensembl protein_coding_gene 1132096 1133364 . - . ID=Thaps21303;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI4];external_name=Thaps21303;logic_name=jgi_thaps3 chr2 ensembl transcript 1132096 1133364 . - . ID=Thaps21303;Parent=Thaps21303;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1132096 1133364 . - 0 ID=Thaps21303;Parent=Thaps21303;rank=1 chr2 . exon 1132096 1133364 . - . ID=Thaps21303.1;Parent=Thaps21303;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1135204 1136670 . - . ID=Thaps21304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI6];external_name=Thaps21304;logic_name=jgi_thaps3 chr2 ensembl transcript 1135204 1136670 . - . ID=Thaps21304;Parent=Thaps21304;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1135204 1135273 . - 0 ID=Thaps21304;Parent=Thaps21304;rank=2 chr2 . exon 1135204 1135273 . - . ID=Thaps21304.2;Parent=Thaps21304;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1135337 1136670 . - 0 ID=Thaps21304;Parent=Thaps21304;rank=1 chr2 . exon 1135337 1136670 . - . ID=Thaps21304.1;Parent=Thaps21304;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1134007 1134903 . + . ID=Thaps2492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI5];external_name=Thaps2492;logic_name=jgi_thaps3 chr2 ensembl transcript 1134007 1134903 . + . ID=Thaps2492;Parent=Thaps2492;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1134007 1134903 . + 0 ID=Thaps2492;Parent=Thaps2492;rank=1 chr2 . exon 1134007 1134903 . + . ID=Thaps2492.1;Parent=Thaps2492;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1137181 1138506 . + . ID=Thaps2494;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI7];external_name=Thaps2494;logic_name=jgi_thaps3 chr2 ensembl transcript 1137181 1138506 . + . ID=Thaps2494;Parent=Thaps2494;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1137181 1137752 . + 0 ID=Thaps2494;Parent=Thaps2494;rank=1 chr2 . exon 1137181 1137752 . + . ID=Thaps2494.1;Parent=Thaps2494;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1137844 1137910 . + 0 ID=Thaps2494;Parent=Thaps2494;rank=2 chr2 . exon 1137844 1137910 . + . ID=Thaps2494.2;Parent=Thaps2494;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1137988 1138506 . + 0 ID=Thaps2494;Parent=Thaps2494;rank=3 chr2 . exon 1137988 1138506 . + . ID=Thaps2494.3;Parent=Thaps2494;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1129638 1131497 . + . ID=Thaps261392;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI3];external_name=Thaps261392;logic_name=jgi_thaps3 chr2 ensembl transcript 1129638 1131497 . + . ID=Thaps261392;Parent=Thaps261392;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1129638 1129704 . + 0 ID=Thaps261392;Parent=Thaps261392;rank=1 chr2 . exon 1129638 1129704 . + . ID=Thaps261392.1;Parent=Thaps261392;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1130086 1130821 . + 0 ID=Thaps261392;Parent=Thaps261392;rank=2 chr2 . exon 1130086 1130821 . + . ID=Thaps261392.2;Parent=Thaps261392;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1130888 1130952 . + 0 ID=Thaps261392;Parent=Thaps261392;rank=3 chr2 . exon 1130888 1130952 . + . ID=Thaps261392.3;Parent=Thaps261392;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1131238 1131292 . + 0 ID=Thaps261392;Parent=Thaps261392;rank=4 chr2 . exon 1131238 1131292 . + . ID=Thaps261392.4;Parent=Thaps261392;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1131368 1131497 . + 0 ID=Thaps261392;Parent=Thaps261392;rank=5 chr2 . exon 1131368 1131497 . + . ID=Thaps261392.5;Parent=Thaps261392;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . repeat_region 1143334 1143365 . ? . description=trf chr2 ensembl protein_coding_gene 1145296 1147059 . - . ID=Thaps21305;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ2];external_name=Thaps21305;logic_name=jgi_thaps3 chr2 ensembl transcript 1145296 1147059 . - . ID=Thaps21305;Parent=Thaps21305;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1145296 1147059 . - 0 ID=Thaps21305;Parent=Thaps21305;rank=1 chr2 . exon 1145296 1147059 . - . ID=Thaps21305.1;Parent=Thaps21305;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1138873 1139619 . - . ID=Thaps2495;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI8];external_name=Thaps2495;logic_name=jgi_thaps3 chr2 ensembl transcript 1138873 1139619 . - . ID=Thaps2495;Parent=Thaps2495;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1138873 1139619 . - 0 ID=Thaps2495;Parent=Thaps2495;rank=1 chr2 . exon 1138873 1139619 . - . ID=Thaps2495.1;Parent=Thaps2495;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1139850 1140344 . + . ID=Thaps2496;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUI9];external_name=Thaps2496;logic_name=jgi_thaps3 chr2 ensembl transcript 1139850 1140344 . + . ID=Thaps2496;Parent=Thaps2496;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1139850 1140062 . + 0 ID=Thaps2496;Parent=Thaps2496;rank=1 chr2 . exon 1139850 1140062 . + . ID=Thaps2496.1;Parent=Thaps2496;constitutive=1;rank=1 chr2 . CDS 1140192 1140344 . + 0 ID=Thaps2496;Parent=Thaps2496;rank=2 chr2 . exon 1140192 1140344 . + . ID=Thaps2496.2;Parent=Thaps2496;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1140613 1141803 . - . ID=Thaps2497;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ0];external_name=Thaps2497;logic_name=jgi_thaps3 chr2 ensembl transcript 1140613 1141803 . - . ID=Thaps2497;Parent=Thaps2497;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1140613 1141803 . - 0 ID=Thaps2497;Parent=Thaps2497;rank=1 chr2 . exon 1140613 1141803 . - . ID=Thaps2497.1;Parent=Thaps2497;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1143159 1144600 . + . ID=Thaps261393;biotype=protein_coding;description=Histone deacetylase 1 HDAC Hda1p [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ1];external_name=Thaps261393;logic_name=jgi_thaps3 chr2 ensembl transcript 1143159 1144600 . + . ID=Thaps261393;Parent=Thaps261393;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1143159 1143486 . + 0 ID=Thaps261393;Parent=Thaps261393;rank=1 chr2 . exon 1143159 1143486 . + . ID=Thaps261393.1;Parent=Thaps261393;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1143547 1144600 . + 0 ID=Thaps261393;Parent=Thaps261393;rank=2 chr2 . exon 1143547 1144600 . + . ID=Thaps261393.2;Parent=Thaps261393;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1155017 1156238 . - . ID=Thaps21306;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ6];external_name=Thaps21306;logic_name=jgi_thaps3 chr2 ensembl transcript 1155017 1156238 . - . ID=Thaps21306;Parent=Thaps21306;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1155017 1155268 . - 0 ID=Thaps21306;Parent=Thaps21306;rank=3 chr2 . exon 1155017 1155268 . - . ID=Thaps21306.3;Parent=Thaps21306;constitutive=1;rank=3 chr2 . CDS 1155368 1155753 . - 0 ID=Thaps21306;Parent=Thaps21306;rank=2 chr2 . exon 1155368 1155753 . - . ID=Thaps21306.2;Parent=Thaps21306;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1155881 1156238 . - 0 ID=Thaps21306;Parent=Thaps21306;rank=1 chr2 . exon 1155881 1156238 . - . ID=Thaps21306.1;Parent=Thaps21306;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1157503 1159626 . + . ID=Thaps21307;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ7];external_name=Thaps21307;logic_name=jgi_thaps3 chr2 ensembl transcript 1157503 1159626 . + . ID=Thaps21307;Parent=Thaps21307;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1157503 1159626 . + 0 ID=Thaps21307;Parent=Thaps21307;rank=1 chr2 . exon 1157503 1159626 . + . ID=Thaps21307.1;Parent=Thaps21307;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1153103 1154146 . + . ID=Thaps2502;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ5];external_name=Thaps2502;logic_name=jgi_thaps3 chr2 ensembl transcript 1153103 1154146 . + . ID=Thaps2502;Parent=Thaps2502;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1153103 1154146 . + 0 ID=Thaps2502;Parent=Thaps2502;rank=1 chr2 . exon 1153103 1154146 . + . ID=Thaps2502.1;Parent=Thaps2502;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1151595 1152458 . - . ID=Thaps261394;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ4];external_name=Thaps261394;logic_name=jgi_thaps3 chr2 ensembl transcript 1151595 1152458 . - . ID=Thaps261394;Parent=Thaps261394;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1151595 1151857 . - 0 ID=Thaps261394;Parent=Thaps261394;rank=3 chr2 . exon 1151595 1151857 . - . ID=Thaps261394.3;Parent=Thaps261394;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1151897 1152061 . - 0 ID=Thaps261394;Parent=Thaps261394;rank=2 chr2 . exon 1151897 1152061 . - . ID=Thaps261394.2;Parent=Thaps261394;constitutive=1;rank=2 chr2 . CDS 1152107 1152458 . - 0 ID=Thaps261394;Parent=Thaps261394;rank=1 chr2 . exon 1152107 1152458 . - . ID=Thaps261394.1;Parent=Thaps261394;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1150460 1151188 . + . ID=Thaps32430;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ3];external_name=Thaps32430;logic_name=jgi_thaps3 chr2 ensembl transcript 1150460 1151188 . + . ID=Thaps32430;Parent=Thaps32430;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1150460 1150582 . + 0 ID=Thaps32430;Parent=Thaps32430;rank=1 chr2 . exon 1150460 1150582 . + . ID=Thaps32430.1;Parent=Thaps32430;constitutive=1;rank=1 chr2 . CDS 1150649 1151188 . + 0 ID=Thaps32430;Parent=Thaps32430;rank=2 chr2 . exon 1150649 1151188 . + . ID=Thaps32430.2;Parent=Thaps32430;constitutive=1;rank=2 chr2 . repeat_region 1167713 1167726 . ? . description=dust chr2 ensembl protein_coding_gene 1162088 1164574 . + . ID=Thaps21308;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ9];external_name=Thaps21308;logic_name=jgi_thaps3 chr2 ensembl transcript 1162088 1164574 . + . ID=Thaps21308;Parent=Thaps21308;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1162088 1164574 . + 0 ID=Thaps21308;Parent=Thaps21308;rank=1 chr2 . exon 1162088 1164574 . + . ID=Thaps21308.1;Parent=Thaps21308;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1165036 1166723 . - . ID=Thaps21309;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK0];external_name=Thaps21309;logic_name=jgi_thaps3 chr2 ensembl transcript 1165036 1166723 . - . ID=Thaps21309;Parent=Thaps21309;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1165036 1166288 . - 0 ID=Thaps21309;Parent=Thaps21309;rank=2 chr2 . exon 1165036 1166288 . - . ID=Thaps21309.2;Parent=Thaps21309;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1166537 1166723 . - 0 ID=Thaps21309;Parent=Thaps21309;rank=1 chr2 . exon 1166537 1166723 . - . ID=Thaps21309.1;Parent=Thaps21309;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1160012 1161627 . - . ID=Thaps2505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUJ8];external_name=Thaps2505;logic_name=jgi_thaps3 chr2 ensembl transcript 1160012 1161627 . - . ID=Thaps2505;Parent=Thaps2505;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1160012 1160403 . - 0 ID=Thaps2505;Parent=Thaps2505;rank=2 chr2 . exon 1160012 1160403 . - . ID=Thaps2505.2;Parent=Thaps2505;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1160517 1161627 . - 0 ID=Thaps2505;Parent=Thaps2505;rank=1 chr2 . exon 1160517 1161627 . - . ID=Thaps2505.1;Parent=Thaps2505;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1167887 1169273 . + . ID=Thaps39539;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK1];external_name=Thaps39539;logic_name=jgi_thaps3 chr2 ensembl transcript 1167887 1169273 . + . ID=Thaps39539;Parent=Thaps39539;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1167887 1167900 . + 0 ID=Thaps39539;Parent=Thaps39539;rank=1 chr2 . exon 1167887 1167900 . + . ID=Thaps39539.1;Parent=Thaps39539;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1168193 1169080 . + 0 ID=Thaps39539;Parent=Thaps39539;rank=2 chr2 . exon 1168193 1169080 . + . ID=Thaps39539.2;Parent=Thaps39539;constitutive=1;rank=2 chr2 . CDS 1169174 1169273 . + 0 ID=Thaps39539;Parent=Thaps39539;rank=3 chr2 . repeat_region 1170929 1170993 . - . description=TE2c_TP chr2 . repeat_region 1175949 1175969 . ? . description=trf chr2 . repeat_region 1176520 1176548 . ? . description=trf chr2 ensembl protein_coding_gene 1171058 1172984 . - . ID=Thaps21311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK3];external_name=Thaps21311;logic_name=jgi_thaps3 chr2 ensembl transcript 1171058 1172984 . - . ID=Thaps21311;Parent=Thaps21311;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1171058 1171570 . - 0 ID=Thaps21311;Parent=Thaps21311;rank=3 chr2 . exon 1171058 1171570 . - . ID=Thaps21311.3;Parent=Thaps21311;constitutive=1;rank=3 chr2 . CDS 1171659 1171821 . - 0 ID=Thaps21311;Parent=Thaps21311;rank=2 chr2 . exon 1171659 1171821 . - . ID=Thaps21311.2;Parent=Thaps21311;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1171882 1172984 . - 0 ID=Thaps21311;Parent=Thaps21311;rank=1 chr2 . exon 1171882 1172984 . - . ID=Thaps21311.1;Parent=Thaps21311;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1173290 1174436 . + . ID=Thaps21312;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK4];external_name=Thaps21312;logic_name=jgi_thaps3 chr2 ensembl transcript 1173290 1174436 . + . ID=Thaps21312;Parent=Thaps21312;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1173290 1173535 . + 0 ID=Thaps21312;Parent=Thaps21312;rank=1 chr2 . exon 1173290 1173535 . + . ID=Thaps21312.1;Parent=Thaps21312;constitutive=1;rank=1 chr2 . CDS 1173702 1174436 . + 0 ID=Thaps21312;Parent=Thaps21312;rank=2 chr2 . exon 1173702 1174436 . + . ID=Thaps21312.2;Parent=Thaps21312;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1174728 1175300 . - . ID=Thaps21313;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK5];external_name=Thaps21313;logic_name=jgi_thaps3 chr2 ensembl transcript 1174728 1175300 . - . ID=Thaps21313;Parent=Thaps21313;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1174728 1175300 . - 0 ID=Thaps21313;Parent=Thaps21313;rank=1 chr2 . exon 1174728 1175300 . - . ID=Thaps21313.1;Parent=Thaps21313;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1170006 1170512 . - . ID=Thaps2509;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK2];external_name=Thaps2509;logic_name=jgi_thaps3 chr2 ensembl transcript 1170006 1170512 . - . ID=Thaps2509;Parent=Thaps2509;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1170006 1170512 . - 0 ID=Thaps2509;Parent=Thaps2509;rank=1 chr2 . exon 1170006 1170512 . - . ID=Thaps2509.1;Parent=Thaps2509;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1175744 1176815 . - . ID=Thaps2513;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK6];external_name=Thaps2513;logic_name=jgi_thaps3 chr2 ensembl transcript 1175744 1176815 . - . ID=Thaps2513;Parent=Thaps2513;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1175744 1175805 . - 0 ID=Thaps2513;Parent=Thaps2513;rank=5 chr2 . exon 1175744 1175805 . - . ID=Thaps2513.5;Parent=Thaps2513;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1175913 1176000 . - 0 ID=Thaps2513;Parent=Thaps2513;rank=4 chr2 . exon 1175913 1176000 . - . ID=Thaps2513.4;Parent=Thaps2513;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1176128 1176181 . - 0 ID=Thaps2513;Parent=Thaps2513;rank=3 chr2 . exon 1176128 1176181 . - . ID=Thaps2513.3;Parent=Thaps2513;constitutive=1;rank=3 chr2 . CDS 1176298 1176342 . - 0 ID=Thaps2513;Parent=Thaps2513;rank=2 chr2 . exon 1176298 1176342 . - . ID=Thaps2513.2;Parent=Thaps2513;constitutive=1;rank=2 chr2 . CDS 1176672 1176815 . - 0 ID=Thaps2513;Parent=Thaps2513;rank=1 chr2 . exon 1176672 1176815 . - . ID=Thaps2513.1;Parent=Thaps2513;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1177403 1178533 . + . ID=Thaps2514;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK7];external_name=Thaps2514;logic_name=jgi_thaps3 chr2 ensembl transcript 1177403 1178533 . + . ID=Thaps2514;Parent=Thaps2514;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1177403 1178533 . + 0 ID=Thaps2514;Parent=Thaps2514;rank=1 chr2 . exon 1177403 1178533 . + . ID=Thaps2514.1;Parent=Thaps2514;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1178670 1179593 . - . ID=Thaps2515;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK8];external_name=Thaps2515;logic_name=jgi_thaps3 chr2 ensembl transcript 1178670 1179593 . - . ID=Thaps2515;Parent=Thaps2515;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1178670 1179593 . - 0 ID=Thaps2515;Parent=Thaps2515;rank=1 chr2 . exon 1178670 1179593 . - . ID=Thaps2515.1;Parent=Thaps2515;constitutive=1;rank=1 chr2 . exon 1169174 1169273 . + . ID=Thaps39539.3;Parent=Thaps39539;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . repeat_region 1183667 1183712 . + . description=Copia1I_TP chr2 . repeat_region 1184099 1184124 . ? . description=dust chr2 . repeat_region 1186796 1186833 . ? . description=dust chr2 ensembl protein_coding_gene 1180510 1181073 . + . ID=Thaps2516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUK9];external_name=Thaps2516;logic_name=jgi_thaps3 chr2 ensembl transcript 1180510 1181073 . + . ID=Thaps2516;Parent=Thaps2516;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1180510 1181073 . + 0 ID=Thaps2516;Parent=Thaps2516;rank=1 chr2 . exon 1180510 1181073 . + . ID=Thaps2516.1;Parent=Thaps2516;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1184540 1186591 . - . ID=Thaps2519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUL1];external_name=Thaps2519;logic_name=jgi_thaps3 chr2 ensembl transcript 1184540 1186591 . - . ID=Thaps2519;Parent=Thaps2519;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1184540 1185369 . - 0 ID=Thaps2519;Parent=Thaps2519;rank=2 chr2 . exon 1184540 1185369 . - . ID=Thaps2519.2;Parent=Thaps2519;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1185448 1186591 . - 0 ID=Thaps2519;Parent=Thaps2519;rank=1 chr2 . exon 1185448 1186591 . - . ID=Thaps2519.1;Parent=Thaps2519;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1187787 1188796 . + . ID=Thaps261400;biotype=protein_coding;description=Violaxanthin de-epoxidase-like 2 [Source:UniProtKB/TrEMBL%3BAcc:B8BUL2];external_name=Thaps261400;logic_name=jgi_thaps3 chr2 ensembl transcript 1187787 1188796 . + . ID=Thaps261400;Parent=Thaps261400;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1187787 1187856 . + 0 ID=Thaps261400;Parent=Thaps261400;rank=1 chr2 . exon 1187787 1187856 . + . ID=Thaps261400.1;Parent=Thaps261400;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1187934 1188181 . + 0 ID=Thaps261400;Parent=Thaps261400;rank=2 chr2 . exon 1187934 1188181 . + . ID=Thaps261400.2;Parent=Thaps261400;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1188256 1188336 . + 0 ID=Thaps261400;Parent=Thaps261400;rank=3 chr2 . exon 1188256 1188336 . + . ID=Thaps261400.3;Parent=Thaps261400;constitutive=1;rank=3 chr2 . CDS 1188422 1188796 . + 0 ID=Thaps261400;Parent=Thaps261400;rank=4 chr2 . exon 1188422 1188796 . + . ID=Thaps261400.4;Parent=Thaps261400;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 1181648 1182806 . - . ID=Thaps31829;biotype=protein_coding;description=Cysteine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BUL0];external_name=Thaps31829;logic_name=jgi_thaps3 chr2 ensembl transcript 1181648 1182806 . - . ID=Thaps31829;Parent=Thaps31829;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1181648 1181723 . - 0 ID=Thaps31829;Parent=Thaps31829;rank=3 chr2 . exon 1181648 1181723 . - . ID=Thaps31829.3;Parent=Thaps31829;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1181816 1182028 . - 0 ID=Thaps31829;Parent=Thaps31829;rank=2 chr2 . exon 1181816 1182028 . - . ID=Thaps31829.2;Parent=Thaps31829;constitutive=1;rank=2 chr2 . CDS 1182136 1182806 . - 0 ID=Thaps31829;Parent=Thaps31829;rank=1 chr2 . exon 1182136 1182806 . - . ID=Thaps31829.1;Parent=Thaps31829;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 1191548 1191586 . ? . description=trf chr2 . repeat_region 1194918 1194944 . ? . description=trf chr2 ensembl protein_coding_gene 1190658 1191662 . + . ID=Thaps2521;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUL3];external_name=Thaps2521;logic_name=jgi_thaps3 chr2 ensembl transcript 1190658 1191662 . + . ID=Thaps2521;Parent=Thaps2521;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1190658 1191662 . + 0 ID=Thaps2521;Parent=Thaps2521;rank=1 chr2 . exon 1190658 1191662 . + . ID=Thaps2521.1;Parent=Thaps2521;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1195234 1197020 . + . ID=Thaps39540;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUL4];external_name=Thaps39540;logic_name=jgi_thaps3 chr2 ensembl transcript 1195234 1197020 . + . ID=Thaps39540;Parent=Thaps39540;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1195234 1195659 . + 0 ID=Thaps39540;Parent=Thaps39540;rank=1 chr2 . exon 1195234 1195659 . + . ID=Thaps39540.1;Parent=Thaps39540;constitutive=1;rank=1 chr2 . CDS 1195736 1195870 . + 0 ID=Thaps39540;Parent=Thaps39540;rank=2 chr2 . exon 1195736 1195870 . + . ID=Thaps39540.2;Parent=Thaps39540;constitutive=1;rank=2 chr2 . CDS 1195944 1196043 . + 0 ID=Thaps39540;Parent=Thaps39540;rank=3 chr2 . exon 1195944 1196043 . + . ID=Thaps39540.3;Parent=Thaps39540;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1196124 1196255 . + 0 ID=Thaps39540;Parent=Thaps39540;rank=4 chr2 . exon 1196124 1196255 . + . ID=Thaps39540.4;Parent=Thaps39540;constitutive=1;rank=4 chr2 . CDS 1196335 1197020 . + 0 ID=Thaps39540;Parent=Thaps39540;rank=5 chr2 . exon 1196335 1197020 . + . ID=Thaps39540.5;Parent=Thaps39540;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . repeat_region 1201768 1201775 . ? . description=dust chr2 . repeat_region 1203249 1203317 . - . description=MuDR1_TP chr2 . repeat_region 1206096 1206119 . ? . description=dust chr2 . repeat_region 1206694 1206701 . ? . description=dust chr2 ensembl protein_coding_gene 1208040 1209428 . + . ID=Thaps21316;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUL9];external_name=Thaps21316;logic_name=jgi_thaps3 chr2 ensembl transcript 1208040 1209428 . + . ID=Thaps21316;Parent=Thaps21316;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1208040 1209428 . + 0 ID=Thaps21316;Parent=Thaps21316;rank=1 chr2 . exon 1208040 1209428 . + . ID=Thaps21316.1;Parent=Thaps21316;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1199257 1199583 . + . ID=Thaps2523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUL5];external_name=Thaps2523;logic_name=jgi_thaps3 chr2 ensembl transcript 1199257 1199583 . + . ID=Thaps2523;Parent=Thaps2523;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1199257 1199583 . + 0 ID=Thaps2523;Parent=Thaps2523;rank=1 chr2 . exon 1199257 1199583 . + . ID=Thaps2523.1;Parent=Thaps2523;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1203815 1204536 . + . ID=Thaps2524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUL6];external_name=Thaps2524;logic_name=jgi_thaps3 chr2 ensembl transcript 1203815 1204536 . + . ID=Thaps2524;Parent=Thaps2524;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1203815 1204462 . + 0 ID=Thaps2524;Parent=Thaps2524;rank=1 chr2 . exon 1203815 1204462 . + . ID=Thaps2524.1;Parent=Thaps2524;constitutive=1;rank=1 chr2 . CDS 1204498 1204536 . + 0 ID=Thaps2524;Parent=Thaps2524;rank=2 chr2 . exon 1204498 1204536 . + . ID=Thaps2524.2;Parent=Thaps2524;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1204716 1206407 . - . ID=Thaps2525;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUL7];external_name=Thaps2525;logic_name=jgi_thaps3 chr2 ensembl transcript 1204716 1206407 . - . ID=Thaps2525;Parent=Thaps2525;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1204716 1206407 . - 0 ID=Thaps2525;Parent=Thaps2525;rank=1 chr2 . exon 1204716 1206407 . - . ID=Thaps2525.1;Parent=Thaps2525;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1206927 1207664 . - . ID=Thaps2526;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUL8];external_name=Thaps2526;logic_name=jgi_thaps3 chr2 ensembl transcript 1206927 1207664 . - . ID=Thaps2526;Parent=Thaps2526;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1206927 1207664 . - 0 ID=Thaps2526;Parent=Thaps2526;rank=1 chr2 . exon 1206927 1207664 . - . ID=Thaps2526.1;Parent=Thaps2526;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1210759 1212519 . + . ID=Thaps21318;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUM1];external_name=Thaps21318;logic_name=jgi_thaps3 chr2 ensembl transcript 1210759 1212519 . + . ID=Thaps21318;Parent=Thaps21318;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1210759 1212519 . + 0 ID=Thaps21318;Parent=Thaps21318;rank=1 chr2 . exon 1210759 1212519 . + . ID=Thaps21318.1;Parent=Thaps21318;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1213566 1216554 . + . ID=Thaps2530;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUM2];external_name=Thaps2530;logic_name=jgi_thaps3 chr2 ensembl transcript 1213566 1216554 . + . ID=Thaps2530;Parent=Thaps2530;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1213566 1214301 . + 0 ID=Thaps2530;Parent=Thaps2530;rank=1 chr2 . exon 1213566 1214301 . + . ID=Thaps2530.1;Parent=Thaps2530;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1214375 1216554 . + 0 ID=Thaps2530;Parent=Thaps2530;rank=2 chr2 . exon 1214375 1216554 . + . ID=Thaps2530.2;Parent=Thaps2530;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1209617 1209967 . - . ID=Thaps27101;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUM0];external_name=Thaps27101;logic_name=jgi_thaps3 chr2 ensembl transcript 1209617 1209967 . - . ID=Thaps27101;Parent=Thaps27101;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1209617 1209967 . - 0 ID=Thaps27101;Parent=Thaps27101;rank=1 chr2 . exon 1209617 1209967 . - . ID=Thaps27101.1;Parent=Thaps27101;constitutive=1;rank=1 chr2 . repeat_region 1218829 1219001 . - . description=Gypsy1ALTR_TP chr2 . repeat_region 1228259 1228325 . ? . description=trf chr2 . repeat_region 1228278 1228321 . ? . description=trf chr2 . repeat_region 1228278 1228321 . ? . description=dust chr2 ensembl protein_coding_gene 1219499 1221471 . + . ID=Thaps13556;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUM3];external_name=Thaps13556;logic_name=jgi_thaps3 chr2 ensembl transcript 1219499 1221471 . + . ID=Thaps13556;Parent=Thaps13556;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1219499 1219676 . + 0 ID=Thaps13556;Parent=Thaps13556;rank=1 chr2 . exon 1219499 1219676 . + . ID=Thaps13556.1;Parent=Thaps13556;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1219757 1219913 . + 0 ID=Thaps13556;Parent=Thaps13556;rank=2 chr2 . exon 1219757 1219913 . + . ID=Thaps13556.2;Parent=Thaps13556;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1219985 1220439 . + 0 ID=Thaps13556;Parent=Thaps13556;rank=3 chr2 . exon 1219985 1220439 . + . ID=Thaps13556.3;Parent=Thaps13556;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1220519 1220792 . + 0 ID=Thaps13556;Parent=Thaps13556;rank=4 chr2 . exon 1220519 1220792 . + . ID=Thaps13556.4;Parent=Thaps13556;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1220954 1221024 . + 0 ID=Thaps13556;Parent=Thaps13556;rank=5 chr2 . exon 1220954 1221024 . + . ID=Thaps13556.5;Parent=Thaps13556;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1221110 1221471 . + 0 ID=Thaps13556;Parent=Thaps13556;rank=6 chr2 . exon 1221110 1221471 . + . ID=Thaps13556.6;Parent=Thaps13556;constitutive=1;ensembl_end_phase=2;rank=6 chr2 ensembl protein_coding_gene 1223874 1225266 . + . ID=Thaps261403;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUM4];external_name=Thaps261403;logic_name=jgi_thaps3 chr2 ensembl transcript 1223874 1225266 . + . ID=Thaps261403;Parent=Thaps261403;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1223874 1224275 . + 0 ID=Thaps261403;Parent=Thaps261403;rank=1 chr2 . exon 1223874 1224275 . + . ID=Thaps261403.1;Parent=Thaps261403;constitutive=1;rank=1 chr2 . CDS 1224376 1224663 . + 0 ID=Thaps261403;Parent=Thaps261403;rank=2 chr2 . exon 1224376 1224663 . + . ID=Thaps261403.2;Parent=Thaps261403;constitutive=1;rank=2 chr2 . CDS 1224760 1224862 . + 0 ID=Thaps261403;Parent=Thaps261403;rank=3 chr2 . exon 1224760 1224862 . + . ID=Thaps261403.3;Parent=Thaps261403;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1224884 1225266 . + 0 ID=Thaps261403;Parent=Thaps261403;rank=4 chr2 . exon 1224884 1225266 . + . ID=Thaps261403.4;Parent=Thaps261403;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 1226641 1227098 . - . ID=Thaps268279;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUM5];external_name=Thaps268279;logic_name=jgi_thaps3 chr2 ensembl transcript 1226641 1227098 . - . ID=Thaps268279;Parent=Thaps268279;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1226641 1226660 . - 0 ID=Thaps268279;Parent=Thaps268279;rank=2 chr2 . exon 1226641 1226660 . - . ID=Thaps268279.2;Parent=Thaps268279;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1226768 1227098 . - 0 ID=Thaps268279;Parent=Thaps268279;rank=1 chr2 . exon 1226768 1227098 . - . ID=Thaps268279.1;Parent=Thaps268279;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1227410 1229053 . + . ID=Thaps268280;biotype=protein_coding;description=Dihydrolipoamide s-acetyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BUM6];external_name=LAT2;logic_name=jgi_thaps3 chr2 ensembl transcript 1227410 1229053 . + . ID=Thaps268280;Parent=Thaps268280;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1227410 1227715 . + 0 ID=Thaps268280;Parent=Thaps268280;rank=1 chr2 . exon 1227410 1227715 . + . ID=Thaps268280.1;Parent=Thaps268280;constitutive=1;rank=1 chr2 . CDS 1227833 1229053 . + 0 ID=Thaps268280;Parent=Thaps268280;rank=2 chr2 . exon 1227833 1229053 . + . ID=Thaps268280.2;Parent=Thaps268280;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1237844 1238227 . + . ID=Thaps19601;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUN2];external_name=Thaps19601;logic_name=jgi_thaps3 chr2 ensembl transcript 1237844 1238227 . + . ID=Thaps19601;Parent=Thaps19601;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1237844 1238227 . + 0 ID=Thaps19601;Parent=Thaps19601;rank=1 chr2 . exon 1237844 1238227 . + . ID=Thaps19601.1;Parent=Thaps19601;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1229414 1230328 . + . ID=Thaps2535;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUM7];external_name=Thaps2535;logic_name=jgi_thaps3 chr2 ensembl transcript 1229414 1230328 . + . ID=Thaps2535;Parent=Thaps2535;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1229414 1229753 . + 0 ID=Thaps2535;Parent=Thaps2535;rank=1 chr2 . exon 1229414 1229753 . + . ID=Thaps2535.1;Parent=Thaps2535;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1229946 1230328 . + 0 ID=Thaps2535;Parent=Thaps2535;rank=2 chr2 . exon 1229946 1230328 . + . ID=Thaps2535.2;Parent=Thaps2535;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1232496 1234406 . + . ID=Thaps2537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUM9];external_name=Thaps2537;logic_name=jgi_thaps3 chr2 ensembl transcript 1232496 1234406 . + . ID=Thaps2537;Parent=Thaps2537;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1232496 1234406 . + 0 ID=Thaps2537;Parent=Thaps2537;rank=1 chr2 . exon 1232496 1234406 . + . ID=Thaps2537.1;Parent=Thaps2537;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1234618 1235693 . - . ID=Thaps2538;biotype=protein_coding;description=Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BUN0];external_name=Thaps2538;logic_name=jgi_thaps3 chr2 ensembl transcript 1234618 1235693 . - . ID=Thaps2538;Parent=Thaps2538;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1234618 1234944 . - 0 ID=Thaps2538;Parent=Thaps2538;rank=2 chr2 . exon 1234618 1234944 . - . ID=Thaps2538.2;Parent=Thaps2538;constitutive=1;rank=2 chr2 . CDS 1235067 1235693 . - 0 ID=Thaps2538;Parent=Thaps2538;rank=1 chr2 . exon 1235067 1235693 . - . ID=Thaps2538.1;Parent=Thaps2538;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1238399 1239481 . - . ID=Thaps2540;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUN3];external_name=Thaps2540;logic_name=jgi_thaps3 chr2 ensembl transcript 1238399 1239481 . - . ID=Thaps2540;Parent=Thaps2540;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1238399 1239481 . - 0 ID=Thaps2540;Parent=Thaps2540;rank=1 chr2 . exon 1238399 1239481 . - . ID=Thaps2540.1;Parent=Thaps2540;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1230742 1232069 . - . ID=Thaps261407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUM8];external_name=Thaps261407;logic_name=jgi_thaps3 chr2 ensembl transcript 1230742 1232069 . - . ID=Thaps261407;Parent=Thaps261407;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1230742 1231619 . - 0 ID=Thaps261407;Parent=Thaps261407;rank=2 chr2 . exon 1230742 1231619 . - . ID=Thaps261407.2;Parent=Thaps261407;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1231689 1232069 . - 0 ID=Thaps261407;Parent=Thaps261407;rank=1 chr2 . exon 1231689 1232069 . - . ID=Thaps261407.1;Parent=Thaps261407;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1236371 1237373 . - . ID=Thaps39550;biotype=protein_coding;description=RS7%2C ribosomal protein 7 [Source:UniProtKB/TrEMBL%3BAcc:B8BUN1];external_name=RS7;logic_name=jgi_thaps3 chr2 ensembl transcript 1236371 1237373 . - . ID=Thaps39550;Parent=Thaps39550;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1236371 1236583 . - 0 ID=Thaps39550;Parent=Thaps39550;rank=3 chr2 . exon 1236371 1236583 . - . ID=Thaps39550.3;Parent=Thaps39550;constitutive=1;rank=3 chr2 . CDS 1236670 1236990 . - 0 ID=Thaps39550;Parent=Thaps39550;rank=2 chr2 . exon 1236670 1236990 . - . ID=Thaps39550.2;Parent=Thaps39550;constitutive=1;rank=2 chr2 . CDS 1237341 1237373 . - 0 ID=Thaps39550;Parent=Thaps39550;rank=1 chr2 . exon 1237341 1237373 . - . ID=Thaps39550.1;Parent=Thaps39550;constitutive=1;rank=1 chr2 . repeat_region 1244168 1244175 . ? . description=dust chr2 ensembl protein_coding_gene 1242121 1243672 . - . ID=Thaps21324;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUN5];external_name=Thaps21324;logic_name=jgi_thaps3 chr2 ensembl transcript 1242121 1243672 . - . ID=Thaps21324;Parent=Thaps21324;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1242121 1242150 . - 0 ID=Thaps21324;Parent=Thaps21324;rank=2 chr2 . exon 1242121 1242150 . - . ID=Thaps21324.2;Parent=Thaps21324;constitutive=1;rank=2 chr2 . CDS 1242242 1243672 . - 0 ID=Thaps21324;Parent=Thaps21324;rank=1 chr2 . exon 1242242 1243672 . - . ID=Thaps21324.1;Parent=Thaps21324;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1244108 1245204 . - . ID=Thaps2543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUN6];external_name=Thaps2543;logic_name=jgi_thaps3 chr2 ensembl transcript 1244108 1245204 . - . ID=Thaps2543;Parent=Thaps2543;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1244108 1244812 . - 0 ID=Thaps2543;Parent=Thaps2543;rank=2 chr2 . exon 1244108 1244812 . - . ID=Thaps2543.2;Parent=Thaps2543;constitutive=1;rank=2 chr2 . CDS 1244929 1245204 . - 0 ID=Thaps2543;Parent=Thaps2543;rank=1 chr2 . exon 1244929 1245204 . - . ID=Thaps2543.1;Parent=Thaps2543;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1245439 1247095 . - . ID=Thaps32319;biotype=protein_coding;description=Imp-gmp specific 5' nucleotidase [Source:UniProtKB/TrEMBL%3BAcc:B8BUN7];external_name=Thaps32319;logic_name=jgi_thaps3 chr2 ensembl transcript 1245439 1247095 . - . ID=Thaps32319;Parent=Thaps32319;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1245439 1245621 . - 0 ID=Thaps32319;Parent=Thaps32319;rank=3 chr2 . exon 1245439 1245621 . - . ID=Thaps32319.3;Parent=Thaps32319;constitutive=1;rank=3 chr2 . CDS 1245718 1245975 . - 0 ID=Thaps32319;Parent=Thaps32319;rank=2 chr2 . exon 1245718 1245975 . - . ID=Thaps32319.2;Parent=Thaps32319;constitutive=1;rank=2 chr2 . CDS 1246046 1247095 . - 0 ID=Thaps32319;Parent=Thaps32319;rank=1 chr2 . exon 1246046 1247095 . - . ID=Thaps32319.1;Parent=Thaps32319;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1240088 1241212 . + . ID=Thaps32486;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUN4];external_name=Thaps32486;logic_name=jgi_thaps3 chr2 ensembl transcript 1240088 1241212 . + . ID=Thaps32486;Parent=Thaps32486;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1240088 1240445 . + 0 ID=Thaps32486;Parent=Thaps32486;rank=1 chr2 . exon 1240088 1240445 . + . ID=Thaps32486.1;Parent=Thaps32486;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1240995 1241212 . + 0 ID=Thaps32486;Parent=Thaps32486;rank=2 chr2 . exon 1240995 1241212 . + . ID=Thaps32486.2;Parent=Thaps32486;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 1251563 1251707 . ? . description=trf chr2 ensembl protein_coding_gene 1255244 1256125 . + . ID=Thaps17073;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUP0];external_name=Thaps17073;logic_name=jgi_thaps3 chr2 ensembl transcript 1255244 1256125 . + . ID=Thaps17073;Parent=Thaps17073;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1255244 1256125 . + 0 ID=Thaps17073;Parent=Thaps17073;rank=1 chr2 . exon 1255244 1256125 . + . ID=Thaps17073.1;Parent=Thaps17073;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1248797 1249969 . + . ID=Thaps261414;biotype=protein_coding;description=Phosphate transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BUN8];external_name=Thaps261414;logic_name=jgi_thaps3 chr2 ensembl transcript 1248797 1249969 . + . ID=Thaps261414;Parent=Thaps261414;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1248797 1248959 . + 0 ID=Thaps261414;Parent=Thaps261414;rank=1 chr2 . exon 1248797 1248959 . + . ID=Thaps261414.1;Parent=Thaps261414;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1248978 1249259 . + 0 ID=Thaps261414;Parent=Thaps261414;rank=2 chr2 . exon 1248978 1249259 . + . ID=Thaps261414.2;Parent=Thaps261414;constitutive=1;rank=2 chr2 . CDS 1249284 1249969 . + 0 ID=Thaps261414;Parent=Thaps261414;rank=3 chr2 . exon 1249284 1249969 . + . ID=Thaps261414.3;Parent=Thaps261414;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 1253321 1253904 . - . ID=Thaps268286;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUN9];external_name=Thaps268286;logic_name=jgi_thaps3 chr2 ensembl transcript 1253321 1253904 . - . ID=Thaps268286;Parent=Thaps268286;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1253321 1253602 . - 0 ID=Thaps268286;Parent=Thaps268286;rank=2 chr2 . exon 1253321 1253602 . - . ID=Thaps268286.2;Parent=Thaps268286;constitutive=1;rank=2 chr2 . CDS 1253692 1253904 . - 0 ID=Thaps268286;Parent=Thaps268286;rank=1 chr2 . exon 1253692 1253904 . - . ID=Thaps268286.1;Parent=Thaps268286;constitutive=1;rank=1 chr2 . repeat_region 1268027 1268034 . ? . description=dust chr2 ensembl protein_coding_gene 1259702 1262936 . + . ID=Thaps21326;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUP1];external_name=Thaps21326;logic_name=jgi_thaps3 chr2 ensembl transcript 1259702 1262936 . + . ID=Thaps21326;Parent=Thaps21326;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1259702 1261801 . + 0 ID=Thaps21326;Parent=Thaps21326;rank=1 chr2 . exon 1259702 1261801 . + . ID=Thaps21326.1;Parent=Thaps21326;constitutive=1;rank=1 chr2 . CDS 1261875 1262936 . + 0 ID=Thaps21326;Parent=Thaps21326;rank=2 chr2 . exon 1261875 1262936 . + . ID=Thaps21326.2;Parent=Thaps21326;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1264072 1265860 . - . ID=Thaps21327;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUP2];external_name=Thaps21327;logic_name=jgi_thaps3 chr2 ensembl transcript 1264072 1265860 . - . ID=Thaps21327;Parent=Thaps21327;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1264072 1265443 . - 0 ID=Thaps21327;Parent=Thaps21327;rank=2 chr2 . exon 1264072 1265443 . - . ID=Thaps21327.2;Parent=Thaps21327;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1265562 1265860 . - 0 ID=Thaps21327;Parent=Thaps21327;rank=1 chr2 . exon 1265562 1265860 . - . ID=Thaps21327.1;Parent=Thaps21327;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1267990 1268940 . - . ID=Thaps21328;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUP4];external_name=Thaps21328;logic_name=jgi_thaps3 chr2 ensembl transcript 1267990 1268940 . - . ID=Thaps21328;Parent=Thaps21328;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1267990 1268940 . - 0 ID=Thaps21328;Parent=Thaps21328;rank=1 chr2 . exon 1267990 1268940 . - . ID=Thaps21328.1;Parent=Thaps21328;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1266065 1267186 . + . ID=Thaps2550;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUP3];external_name=Thaps2550;logic_name=jgi_thaps3 chr2 ensembl transcript 1266065 1267186 . + . ID=Thaps2550;Parent=Thaps2550;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1266065 1267186 . + 0 ID=Thaps2550;Parent=Thaps2550;rank=1 chr2 . exon 1266065 1267186 . + . ID=Thaps2550.1;Parent=Thaps2550;constitutive=1;rank=1 chr2 . repeat_region 1269303 1269356 . ? . description=trf chr2 . repeat_region 1269307 1269415 . + . description=Copia9LTR_TP chr2 ensembl protein_coding_gene 1278208 1280392 . - . ID=Thaps12836;biotype=protein_coding;description=Inositol 5-phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BUP8];external_name=Thaps12836;logic_name=jgi_thaps3 chr2 ensembl transcript 1278208 1280392 . - . ID=Thaps12836;Parent=Thaps12836;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1278208 1278954 . - 0 ID=Thaps12836;Parent=Thaps12836;rank=3 chr2 . exon 1278208 1278954 . - . ID=Thaps12836.3;Parent=Thaps12836;constitutive=1;rank=3 chr2 . CDS 1279041 1279979 . - 0 ID=Thaps12836;Parent=Thaps12836;rank=2 chr2 . CDS 1280096 1280392 . - 0 ID=Thaps12836;Parent=Thaps12836;rank=1 chr2 ensembl protein_coding_gene 1271028 1272201 . + . ID=Thaps2552;biotype=protein_coding;description=tRNA-dihydrouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BUP5];external_name=Thaps2552;logic_name=jgi_thaps3 chr2 ensembl transcript 1271028 1272201 . + . ID=Thaps2552;Parent=Thaps2552;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1271028 1272046 . + 0 ID=Thaps2552;Parent=Thaps2552;rank=1 chr2 . exon 1271028 1272046 . + . ID=Thaps2552.1;Parent=Thaps2552;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1272159 1272201 . + 0 ID=Thaps2552;Parent=Thaps2552;rank=2 chr2 . exon 1272159 1272201 . + . ID=Thaps2552.2;Parent=Thaps2552;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1272637 1273629 . - . ID=Thaps2553;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUP6];external_name=Thaps2553;logic_name=jgi_thaps3 chr2 ensembl transcript 1272637 1273629 . - . ID=Thaps2553;Parent=Thaps2553;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1272637 1273629 . - 0 ID=Thaps2553;Parent=Thaps2553;rank=1 chr2 . exon 1272637 1273629 . - . ID=Thaps2553.1;Parent=Thaps2553;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1273993 1275295 . + . ID=Thaps25933;biotype=protein_coding;description=Triose or hexose phosphate/phosphate translocator [Source:UniProtKB/TrEMBL%3BAcc:B8BUP7];external_name=Thaps25933;logic_name=jgi_thaps3 chr2 ensembl transcript 1273993 1275295 . + . ID=Thaps25933;Parent=Thaps25933;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1273993 1274034 . + 0 ID=Thaps25933;Parent=Thaps25933;rank=1 chr2 . exon 1273993 1274034 . + . ID=Thaps25933.1;Parent=Thaps25933;constitutive=1;rank=1 chr2 . CDS 1274220 1274465 . + 0 ID=Thaps25933;Parent=Thaps25933;rank=2 chr2 . exon 1274220 1274465 . + . ID=Thaps25933.2;Parent=Thaps25933;constitutive=1;rank=2 chr2 . CDS 1274606 1275295 . + 0 ID=Thaps25933;Parent=Thaps25933;rank=3 chr2 . exon 1274606 1275295 . + . ID=Thaps25933.3;Parent=Thaps25933;constitutive=1;rank=3 chr2 . repeat_region 1280406 1280438 . ? . description=dust chr2 . repeat_region 1280504 1280524 . ? . description=dust chr2 . repeat_region 1280898 1280930 . ? . description=dust chr2 . exon 1279041 1279979 . - . ID=Thaps12836.2;Parent=Thaps12836;constitutive=1;rank=2 chr2 . exon 1280096 1280392 . - . ID=Thaps12836.1;Parent=Thaps12836;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1284064 1285274 . + . ID=Thaps2557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ0];external_name=Thaps2557;logic_name=jgi_thaps3 chr2 ensembl transcript 1284064 1285274 . + . ID=Thaps2557;Parent=Thaps2557;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1284064 1284389 . + 0 ID=Thaps2557;Parent=Thaps2557;rank=1 chr2 . exon 1284064 1284389 . + . ID=Thaps2557.1;Parent=Thaps2557;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1284520 1284634 . + 0 ID=Thaps2557;Parent=Thaps2557;rank=2 chr2 . exon 1284520 1284634 . + . ID=Thaps2557.2;Parent=Thaps2557;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1284723 1285274 . + 0 ID=Thaps2557;Parent=Thaps2557;rank=3 chr2 . exon 1284723 1285274 . + . ID=Thaps2557.3;Parent=Thaps2557;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1287007 1288701 . + . ID=Thaps31690;biotype=protein_coding;description=AAA family cell division control-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ1];external_name=Thaps31690;logic_name=jgi_thaps3 chr2 ensembl transcript 1287007 1288701 . + . ID=Thaps31690;Parent=Thaps31690;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1287007 1288701 . + 0 ID=Thaps31690;Parent=Thaps31690;rank=1 chr2 . exon 1287007 1288701 . + . ID=Thaps31690.1;Parent=Thaps31690;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1282134 1283255 . + . ID=Thaps31822;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUP9];external_name=Thaps31822;logic_name=jgi_thaps3 chr2 ensembl transcript 1282134 1283255 . + . ID=Thaps31822;Parent=Thaps31822;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1282134 1282628 . + 0 ID=Thaps31822;Parent=Thaps31822;rank=1 chr2 . exon 1282134 1282628 . + . ID=Thaps31822.1;Parent=Thaps31822;constitutive=1;rank=1 chr2 . CDS 1282728 1283255 . + 0 ID=Thaps31822;Parent=Thaps31822;rank=2 chr2 . exon 1282728 1283255 . + . ID=Thaps31822.2;Parent=Thaps31822;constitutive=1;rank=2 chr2 . repeat_region 1296309 1296328 . ? . description=trf chr2 ensembl protein_coding_gene 1288779 1291089 . - . ID=Thaps21332;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ2];external_name=Thaps21332;logic_name=jgi_thaps3 chr2 ensembl transcript 1288779 1291089 . - . ID=Thaps21332;Parent=Thaps21332;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1288779 1289055 . - 0 ID=Thaps21332;Parent=Thaps21332;rank=3 chr2 . exon 1288779 1289055 . - . ID=Thaps21332.3;Parent=Thaps21332;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1289142 1289843 . - 0 ID=Thaps21332;Parent=Thaps21332;rank=2 chr2 . exon 1289142 1289843 . - . ID=Thaps21332.2;Parent=Thaps21332;constitutive=1;rank=2 chr2 . CDS 1289915 1291089 . - 0 ID=Thaps21332;Parent=Thaps21332;rank=1 chr2 . exon 1289915 1291089 . - . ID=Thaps21332.1;Parent=Thaps21332;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1292086 1295038 . - . ID=Thaps21333;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ4];external_name=Thaps21333;logic_name=jgi_thaps3 chr2 ensembl transcript 1292086 1295038 . - . ID=Thaps21333;Parent=Thaps21333;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1292086 1292148 . - 0 ID=Thaps21333;Parent=Thaps21333;rank=4 chr2 . exon 1292086 1292148 . - . ID=Thaps21333.4;Parent=Thaps21333;constitutive=1;rank=4 chr2 . CDS 1292230 1293341 . - 0 ID=Thaps21333;Parent=Thaps21333;rank=3 chr2 . exon 1292230 1293341 . - . ID=Thaps21333.3;Parent=Thaps21333;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1293422 1293530 . - 0 ID=Thaps21333;Parent=Thaps21333;rank=2 chr2 . exon 1293422 1293530 . - . ID=Thaps21333.2;Parent=Thaps21333;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1293620 1295038 . - 0 ID=Thaps21333;Parent=Thaps21333;rank=1 chr2 . exon 1293620 1295038 . - . ID=Thaps21333.1;Parent=Thaps21333;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1295593 1299388 . + . ID=Thaps2562;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ5];external_name=Thaps2562;logic_name=jgi_thaps3 chr2 ensembl transcript 1295593 1299388 . + . ID=Thaps2562;Parent=Thaps2562;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1295593 1298219 . + 0 ID=Thaps2562;Parent=Thaps2562;rank=1 chr2 . exon 1295593 1298219 . + . ID=Thaps2562.1;Parent=Thaps2562;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1298310 1299266 . + 0 ID=Thaps2562;Parent=Thaps2562;rank=2 chr2 . exon 1298310 1299266 . + . ID=Thaps2562.2;Parent=Thaps2562;constitutive=1;rank=2 chr2 . CDS 1299301 1299388 . + 0 ID=Thaps2562;Parent=Thaps2562;rank=3 chr2 ensembl protein_coding_gene 1291488 1291853 . + . ID=Thaps32209;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ3];external_name=Thaps32209;logic_name=jgi_thaps3 chr2 ensembl transcript 1291488 1291853 . + . ID=Thaps32209;Parent=Thaps32209;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1291488 1291853 . + 0 ID=Thaps32209;Parent=Thaps32209;rank=1 chr2 . exon 1291488 1291853 . + . ID=Thaps32209.1;Parent=Thaps32209;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1300570 1305618 . + . ID=Thaps21334;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ6];external_name=Thaps21334;logic_name=jgi_thaps3 chr2 ensembl transcript 1300570 1305618 . + . ID=Thaps21334;Parent=Thaps21334;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1300570 1300786 . + 0 ID=Thaps21334;Parent=Thaps21334;rank=1 chr2 . exon 1300570 1300786 . + . ID=Thaps21334.1;Parent=Thaps21334;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1300867 1301536 . + 0 ID=Thaps21334;Parent=Thaps21334;rank=2 chr2 . exon 1300867 1301536 . + . ID=Thaps21334.2;Parent=Thaps21334;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1301854 1304164 . + 0 ID=Thaps21334;Parent=Thaps21334;rank=3 chr2 . exon 1301854 1304164 . + . ID=Thaps21334.3;Parent=Thaps21334;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1304245 1305618 . + 0 ID=Thaps21334;Parent=Thaps21334;rank=4 chr2 . exon 1304245 1305618 . + . ID=Thaps21334.4;Parent=Thaps21334;constitutive=1;rank=4 chr2 . exon 1299301 1299388 . + . ID=Thaps2562.3;Parent=Thaps2562;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 1306609 1308284 . + . ID=Thaps2564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ7];external_name=Thaps2564;logic_name=jgi_thaps3 chr2 ensembl transcript 1306609 1308284 . + . ID=Thaps2564;Parent=Thaps2564;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1306609 1307566 . + 0 ID=Thaps2564;Parent=Thaps2564;rank=1 chr2 . exon 1306609 1307566 . + . ID=Thaps2564.1;Parent=Thaps2564;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1307800 1308284 . + 0 ID=Thaps2564;Parent=Thaps2564;rank=2 chr2 . exon 1307800 1308284 . + . ID=Thaps2564.2;Parent=Thaps2564;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1316319 1320234 . - . ID=Thaps21336;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR0];external_name=Thaps21336;logic_name=jgi_thaps3 chr2 ensembl transcript 1316319 1320234 . - . ID=Thaps21336;Parent=Thaps21336;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1316319 1316582 . - 0 ID=Thaps21336;Parent=Thaps21336;rank=9 chr2 . exon 1316319 1316582 . - . ID=Thaps21336.9;Parent=Thaps21336;constitutive=1;rank=9 chr2 . CDS 1316683 1317523 . - 0 ID=Thaps21336;Parent=Thaps21336;rank=8 chr2 . exon 1316683 1317523 . - . ID=Thaps21336.8;Parent=Thaps21336;constitutive=1;ensembl_end_phase=1;rank=8 chr2 . CDS 1317618 1317651 . - 0 ID=Thaps21336;Parent=Thaps21336;rank=7 chr2 . exon 1317618 1317651 . - . ID=Thaps21336.7;Parent=Thaps21336;constitutive=1;ensembl_end_phase=1;rank=7 chr2 . CDS 1317728 1317913 . - 0 ID=Thaps21336;Parent=Thaps21336;rank=6 chr2 . exon 1317728 1317913 . - . ID=Thaps21336.6;Parent=Thaps21336;constitutive=1;rank=6 chr2 . CDS 1318003 1318326 . - 0 ID=Thaps21336;Parent=Thaps21336;rank=5 chr2 . exon 1318003 1318326 . - . ID=Thaps21336.5;Parent=Thaps21336;constitutive=1;rank=5 chr2 . CDS 1318429 1318575 . - 0 ID=Thaps21336;Parent=Thaps21336;rank=4 chr2 . exon 1318429 1318575 . - . ID=Thaps21336.4;Parent=Thaps21336;constitutive=1;rank=4 chr2 . CDS 1318689 1318744 . - 0 ID=Thaps21336;Parent=Thaps21336;rank=3 chr2 . CDS 1318824 1318913 . - 0 ID=Thaps21336;Parent=Thaps21336;rank=2 chr2 . CDS 1318988 1320234 . - 0 ID=Thaps21336;Parent=Thaps21336;rank=1 chr2 ensembl protein_coding_gene 1311149 1312177 . - . ID=Thaps261422;biotype=protein_coding;description=Methionine aminopeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ8];external_name=MAP4;logic_name=jgi_thaps3 chr2 ensembl transcript 1311149 1312177 . - . ID=Thaps261422;Parent=Thaps261422;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1311149 1312177 . - 0 ID=Thaps261422;Parent=Thaps261422;rank=1 chr2 . exon 1311149 1312177 . - . ID=Thaps261422.1;Parent=Thaps261422;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1313056 1314186 . + . ID=Thaps32022;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUQ9];external_name=Thaps32022;logic_name=jgi_thaps3 chr2 ensembl transcript 1313056 1314186 . + . ID=Thaps32022;Parent=Thaps32022;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1313056 1313328 . + 0 ID=Thaps32022;Parent=Thaps32022;rank=1 chr2 . exon 1313056 1313328 . + . ID=Thaps32022.1;Parent=Thaps32022;constitutive=1;rank=1 chr2 . CDS 1313551 1314186 . + 0 ID=Thaps32022;Parent=Thaps32022;rank=2 chr2 . exon 1313551 1314186 . + . ID=Thaps32022.2;Parent=Thaps32022;constitutive=1;rank=2 chr2 . repeat_region 1321996 1322189 . ? . description=trf chr2 . repeat_region 1325030 1325037 . ? . description=dust chr2 ensembl protein_coding_gene 1323448 1324167 . - . ID=Thaps19626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR1];external_name=Thaps19626;logic_name=jgi_thaps3 chr2 ensembl transcript 1323448 1324167 . - . ID=Thaps19626;Parent=Thaps19626;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1323448 1323509 . - 0 ID=Thaps19626;Parent=Thaps19626;rank=2 chr2 . exon 1323448 1323509 . - . ID=Thaps19626.2;Parent=Thaps19626;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1323867 1324167 . - 0 ID=Thaps19626;Parent=Thaps19626;rank=1 chr2 . exon 1323867 1324167 . - . ID=Thaps19626.1;Parent=Thaps19626;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 1318689 1318744 . - . ID=Thaps21336.3;Parent=Thaps21336;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . exon 1318824 1318913 . - . ID=Thaps21336.2;Parent=Thaps21336;constitutive=1;rank=2 chr2 . exon 1318988 1320234 . - . ID=Thaps21336.1;Parent=Thaps21336;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1325464 1326702 . + . ID=Thaps2569;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR2];external_name=Thaps2569;logic_name=jgi_thaps3 chr2 ensembl transcript 1325464 1326702 . + . ID=Thaps2569;Parent=Thaps2569;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1325464 1326702 . + 0 ID=Thaps2569;Parent=Thaps2569;rank=1 chr2 . exon 1325464 1326702 . + . ID=Thaps2569.1;Parent=Thaps2569;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1331668 1333635 . - . ID=Thaps21339;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR5];external_name=Thaps21339;logic_name=jgi_thaps3 chr2 ensembl transcript 1331668 1333635 . - . ID=Thaps21339;Parent=Thaps21339;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1331668 1333159 . - 0 ID=Thaps21339;Parent=Thaps21339;rank=2 chr2 . exon 1331668 1333159 . - . ID=Thaps21339.2;Parent=Thaps21339;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1333376 1333635 . - 0 ID=Thaps21339;Parent=Thaps21339;rank=1 chr2 . exon 1333376 1333635 . - . ID=Thaps21339.1;Parent=Thaps21339;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1330108 1331341 . - . ID=Thaps2571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR4];external_name=Thaps2571;logic_name=jgi_thaps3 chr2 ensembl transcript 1330108 1331341 . - . ID=Thaps2571;Parent=Thaps2571;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1330108 1330556 . - 0 ID=Thaps2571;Parent=Thaps2571;rank=2 chr2 . exon 1330108 1330556 . - . ID=Thaps2571.2;Parent=Thaps2571;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1330639 1331341 . - 0 ID=Thaps2571;Parent=Thaps2571;rank=1 chr2 . exon 1330639 1331341 . - . ID=Thaps2571.1;Parent=Thaps2571;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1334213 1334623 . + . ID=Thaps2573;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR6];external_name=Thaps2573;logic_name=jgi_thaps3 chr2 ensembl transcript 1334213 1334623 . + . ID=Thaps2573;Parent=Thaps2573;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1334213 1334623 . + 0 ID=Thaps2573;Parent=Thaps2573;rank=1 chr2 . exon 1334213 1334623 . + . ID=Thaps2573.1;Parent=Thaps2573;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1334968 1335759 . - . ID=Thaps2574;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR7];external_name=Thaps2574;logic_name=jgi_thaps3 chr2 ensembl transcript 1334968 1335759 . - . ID=Thaps2574;Parent=Thaps2574;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1334968 1335759 . - 0 ID=Thaps2574;Parent=Thaps2574;rank=1 chr2 . exon 1334968 1335759 . - . ID=Thaps2574.1;Parent=Thaps2574;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1336114 1338608 . + . ID=Thaps2575;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR8];external_name=Thaps2575;logic_name=jgi_thaps3 chr2 ensembl transcript 1336114 1338608 . + . ID=Thaps2575;Parent=Thaps2575;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1336114 1338071 . + 0 ID=Thaps2575;Parent=Thaps2575;rank=1 chr2 . exon 1336114 1338071 . + . ID=Thaps2575.1;Parent=Thaps2575;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1338197 1338608 . + 0 ID=Thaps2575;Parent=Thaps2575;rank=2 chr2 . exon 1338197 1338608 . + . ID=Thaps2575.2;Parent=Thaps2575;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1329092 1329613 . + . ID=Thaps31705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR3];external_name=Thaps31705;logic_name=jgi_thaps3 chr2 ensembl transcript 1329092 1329613 . + . ID=Thaps31705;Parent=Thaps31705;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1329092 1329613 . + 0 ID=Thaps31705;Parent=Thaps31705;rank=1 chr2 . exon 1329092 1329613 . + . ID=Thaps31705.1;Parent=Thaps31705;constitutive=1;rank=1 chr2 . repeat_region 1340330 1340361 . ? . description=trf chr2 ensembl protein_coding_gene 1339151 1340015 . - . ID=Thaps2576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUR9];external_name=Thaps2576;logic_name=jgi_thaps3 chr2 ensembl transcript 1339151 1340015 . - . ID=Thaps2576;Parent=Thaps2576;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1339151 1339174 . - 0 ID=Thaps2576;Parent=Thaps2576;rank=3 chr2 . exon 1339151 1339174 . - . ID=Thaps2576.3;Parent=Thaps2576;constitutive=1;rank=3 chr2 . CDS 1339209 1339424 . - 0 ID=Thaps2576;Parent=Thaps2576;rank=2 chr2 . exon 1339209 1339424 . - . ID=Thaps2576.2;Parent=Thaps2576;constitutive=1;rank=2 chr2 . CDS 1339518 1340015 . - 0 ID=Thaps2576;Parent=Thaps2576;rank=1 chr2 . exon 1339518 1340015 . - . ID=Thaps2576.1;Parent=Thaps2576;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1340558 1341467 . + . ID=Thaps2577;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUS0];external_name=Thaps2577;logic_name=jgi_thaps3 chr2 ensembl transcript 1340558 1341467 . + . ID=Thaps2577;Parent=Thaps2577;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1340558 1340917 . + 0 ID=Thaps2577;Parent=Thaps2577;rank=1 chr2 . exon 1340558 1340917 . + . ID=Thaps2577.1;Parent=Thaps2577;constitutive=1;rank=1 chr2 . CDS 1341081 1341467 . + 0 ID=Thaps2577;Parent=Thaps2577;rank=2 chr2 . exon 1341081 1341467 . + . ID=Thaps2577.2;Parent=Thaps2577;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1341650 1342807 . - . ID=Thaps2578;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUS1];external_name=Thaps2578;logic_name=jgi_thaps3 chr2 ensembl transcript 1341650 1342807 . - . ID=Thaps2578;Parent=Thaps2578;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1341650 1342807 . - 0 ID=Thaps2578;Parent=Thaps2578;rank=1 chr2 . exon 1341650 1342807 . - . ID=Thaps2578.1;Parent=Thaps2578;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1344907 1346812 . + . ID=Thaps2580;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUS3];external_name=Thaps2580;logic_name=jgi_thaps3 chr2 ensembl transcript 1344907 1346812 . + . ID=Thaps2580;Parent=Thaps2580;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1344907 1346760 . + 0 ID=Thaps2580;Parent=Thaps2580;rank=1 chr2 . exon 1344907 1346760 . + . ID=Thaps2580.1;Parent=Thaps2580;constitutive=1;rank=1 chr2 . CDS 1346789 1346812 . + 0 ID=Thaps2580;Parent=Thaps2580;rank=2 chr2 . exon 1346789 1346812 . + . ID=Thaps2580.2;Parent=Thaps2580;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1346912 1349468 . - . ID=Thaps2581;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUS4];external_name=Thaps2581;logic_name=jgi_thaps3 chr2 ensembl transcript 1346912 1349468 . - . ID=Thaps2581;Parent=Thaps2581;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1346912 1346940 . - 0 ID=Thaps2581;Parent=Thaps2581;rank=3 chr2 . exon 1346912 1346940 . - . ID=Thaps2581.3;Parent=Thaps2581;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1347029 1348953 . - 0 ID=Thaps2581;Parent=Thaps2581;rank=2 chr2 . exon 1347029 1348953 . - . ID=Thaps2581.2;Parent=Thaps2581;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1349080 1349468 . - 0 ID=Thaps2581;Parent=Thaps2581;rank=1 chr2 ensembl protein_coding_gene 1343427 1344488 . + . ID=Thaps31819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUS2];external_name=Thaps31819;logic_name=jgi_thaps3 chr2 ensembl transcript 1343427 1344488 . + . ID=Thaps31819;Parent=Thaps31819;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1343427 1343622 . + 0 ID=Thaps31819;Parent=Thaps31819;rank=1 chr2 . exon 1343427 1343622 . + . ID=Thaps31819.1;Parent=Thaps31819;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1343755 1344296 . + 0 ID=Thaps31819;Parent=Thaps31819;rank=2 chr2 . exon 1343755 1344296 . + . ID=Thaps31819.2;Parent=Thaps31819;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1344372 1344488 . + 0 ID=Thaps31819;Parent=Thaps31819;rank=3 chr2 . exon 1344372 1344488 . + . ID=Thaps31819.3;Parent=Thaps31819;constitutive=1;rank=3 chr2 . repeat_region 1355744 1355763 . ? . description=dust chr2 ensembl protein_coding_gene 1349679 1351079 . - . ID=Thaps21341;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUS5];external_name=Thaps21341;logic_name=jgi_thaps3 chr2 ensembl transcript 1349679 1351079 . - . ID=Thaps21341;Parent=Thaps21341;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1349679 1351079 . - 0 ID=Thaps21341;Parent=Thaps21341;rank=1 chr2 . exon 1349679 1351079 . - . ID=Thaps21341.1;Parent=Thaps21341;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1354446 1355858 . - . ID=Thaps21342;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUS6];external_name=Thaps21342;logic_name=jgi_thaps3 chr2 ensembl transcript 1354446 1355858 . - . ID=Thaps21342;Parent=Thaps21342;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1354446 1355570 . - 0 ID=Thaps21342;Parent=Thaps21342;rank=2 chr2 . exon 1354446 1355570 . - . ID=Thaps21342.2;Parent=Thaps21342;constitutive=1;rank=2 chr2 . CDS 1355709 1355858 . - 0 ID=Thaps21342;Parent=Thaps21342;rank=1 chr2 . exon 1355709 1355858 . - . ID=Thaps21342.1;Parent=Thaps21342;constitutive=1;rank=1 chr2 . exon 1349080 1349468 . - . ID=Thaps2581.1;Parent=Thaps2581;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1356293 1357081 . - . ID=Thaps268293;biotype=protein_coding;description=Hydroxyacylglutathione hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8BUS7];external_name=Thaps268293;logic_name=jgi_thaps3 chr2 ensembl transcript 1356293 1357081 . - . ID=Thaps268293;Parent=Thaps268293;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1356293 1357081 . - 0 ID=Thaps268293;Parent=Thaps268293;rank=1 chr2 . exon 1356293 1357081 . - . ID=Thaps268293.1;Parent=Thaps268293;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1357560 1358468 . + . ID=Thaps32096;biotype=protein_coding;description=Hydroxyacylglutathione hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8BUS8];external_name=Thaps32096;logic_name=jgi_thaps3 chr2 ensembl transcript 1357560 1358468 . + . ID=Thaps32096;Parent=Thaps32096;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1357560 1357642 . + 0 ID=Thaps32096;Parent=Thaps32096;rank=1 chr2 . exon 1357560 1357642 . + . ID=Thaps32096.1;Parent=Thaps32096;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1357742 1358468 . + 0 ID=Thaps32096;Parent=Thaps32096;rank=2 chr2 . exon 1357742 1358468 . + . ID=Thaps32096.2;Parent=Thaps32096;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . repeat_region 1364274 1364645 . ? . description=trf chr2 . repeat_region 1365849 1366011 . - . description=TE2_TP chr2 . repeat_region 1365891 1365972 . ? . description=trf chr2 ensembl protein_coding_gene 1366469 1369165 . - . ID=Thaps21344;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUT0];external_name=Thaps21344;logic_name=jgi_thaps3 chr2 ensembl transcript 1366469 1369165 . - . ID=Thaps21344;Parent=Thaps21344;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1366469 1366537 . - 0 ID=Thaps21344;Parent=Thaps21344;rank=3 chr2 . exon 1366469 1366537 . - . ID=Thaps21344.3;Parent=Thaps21344;constitutive=1;rank=3 chr2 . CDS 1366693 1368480 . - 0 ID=Thaps21344;Parent=Thaps21344;rank=2 chr2 . exon 1366693 1368480 . - . ID=Thaps21344.2;Parent=Thaps21344;constitutive=1;rank=2 chr2 . CDS 1368578 1369165 . - 0 ID=Thaps21344;Parent=Thaps21344;rank=1 chr2 . exon 1368578 1369165 . - . ID=Thaps21344.1;Parent=Thaps21344;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1359084 1365021 . - . ID=Thaps2587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUS9];external_name=Thaps2587;logic_name=jgi_thaps3 chr2 ensembl transcript 1359084 1365021 . - . ID=Thaps2587;Parent=Thaps2587;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1359084 1359180 . - 0 ID=Thaps2587;Parent=Thaps2587;rank=9 chr2 . exon 1359084 1359180 . - . ID=Thaps2587.9;Parent=Thaps2587;constitutive=1;ensembl_end_phase=1;rank=9 chr2 . CDS 1359216 1360018 . - 0 ID=Thaps2587;Parent=Thaps2587;rank=8 chr2 . exon 1359216 1360018 . - . ID=Thaps2587.8;Parent=Thaps2587;constitutive=1;ensembl_end_phase=2;rank=8 chr2 . CDS 1360105 1360244 . - 0 ID=Thaps2587;Parent=Thaps2587;rank=7 chr2 . exon 1360105 1360244 . - . ID=Thaps2587.7;Parent=Thaps2587;constitutive=1;ensembl_end_phase=2;rank=7 chr2 . CDS 1360287 1361558 . - 0 ID=Thaps2587;Parent=Thaps2587;rank=6 chr2 . exon 1360287 1361558 . - . ID=Thaps2587.6;Parent=Thaps2587;constitutive=1;rank=6 chr2 . CDS 1361658 1362419 . - 0 ID=Thaps2587;Parent=Thaps2587;rank=5 chr2 . exon 1361658 1362419 . - . ID=Thaps2587.5;Parent=Thaps2587;constitutive=1;rank=5 chr2 . CDS 1362494 1363166 . - 0 ID=Thaps2587;Parent=Thaps2587;rank=4 chr2 . exon 1362494 1363166 . - . ID=Thaps2587.4;Parent=Thaps2587;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1363236 1363387 . - 0 ID=Thaps2587;Parent=Thaps2587;rank=3 chr2 . exon 1363236 1363387 . - . ID=Thaps2587.3;Parent=Thaps2587;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1363478 1363887 . - 0 ID=Thaps2587;Parent=Thaps2587;rank=2 chr2 . exon 1363478 1363887 . - . ID=Thaps2587.2;Parent=Thaps2587;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1363997 1365021 . - 0 ID=Thaps2587;Parent=Thaps2587;rank=1 chr2 . exon 1363997 1365021 . - . ID=Thaps2587.1;Parent=Thaps2587;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1371513 1373202 . - . ID=Thaps21346;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUT2];external_name=Thaps21346;logic_name=jgi_thaps3 chr2 ensembl transcript 1371513 1373202 . - . ID=Thaps21346;Parent=Thaps21346;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1371513 1372115 . - 0 ID=Thaps21346;Parent=Thaps21346;rank=3 chr2 . exon 1371513 1372115 . - . ID=Thaps21346.3;Parent=Thaps21346;constitutive=1;rank=3 chr2 . CDS 1372196 1372812 . - 0 ID=Thaps21346;Parent=Thaps21346;rank=2 chr2 . exon 1372196 1372812 . - . ID=Thaps21346.2;Parent=Thaps21346;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1372914 1373202 . - 0 ID=Thaps21346;Parent=Thaps21346;rank=1 chr2 . exon 1372914 1373202 . - . ID=Thaps21346.1;Parent=Thaps21346;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1377766 1378950 . - . ID=Thaps2592;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUT4];external_name=Thaps2592;logic_name=jgi_thaps3 chr2 ensembl transcript 1377766 1378950 . - . ID=Thaps2592;Parent=Thaps2592;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1377766 1378950 . - 0 ID=Thaps2592;Parent=Thaps2592;rank=1 chr2 . exon 1377766 1378950 . - . ID=Thaps2592.1;Parent=Thaps2592;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1374739 1375506 . + . ID=Thaps261430;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BUT3];external_name=Thaps261430;logic_name=jgi_thaps3 chr2 ensembl transcript 1374739 1375506 . + . ID=Thaps261430;Parent=Thaps261430;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1374739 1374889 . + 0 ID=Thaps261430;Parent=Thaps261430;rank=1 chr2 . exon 1374739 1374889 . + . ID=Thaps261430.1;Parent=Thaps261430;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1374962 1375206 . + 0 ID=Thaps261430;Parent=Thaps261430;rank=2 chr2 . exon 1374962 1375206 . + . ID=Thaps261430.2;Parent=Thaps261430;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1375225 1375506 . + 0 ID=Thaps261430;Parent=Thaps261430;rank=3 chr2 . exon 1375225 1375506 . + . ID=Thaps261430.3;Parent=Thaps261430;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1370366 1371267 . + . ID=Thaps31757;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUT1];external_name=Thaps31757;logic_name=jgi_thaps3 chr2 ensembl transcript 1370366 1371267 . + . ID=Thaps31757;Parent=Thaps31757;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1370366 1370560 . + 0 ID=Thaps31757;Parent=Thaps31757;rank=1 chr2 . exon 1370366 1370560 . + . ID=Thaps31757.1;Parent=Thaps31757;constitutive=1;rank=1 chr2 . CDS 1370674 1371267 . + 0 ID=Thaps31757;Parent=Thaps31757;rank=2 chr2 . exon 1370674 1371267 . + . ID=Thaps31757.2;Parent=Thaps31757;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1383606 1384542 . - . ID=Thaps21348;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUT8];external_name=Thaps21348;logic_name=jgi_thaps3 chr2 ensembl transcript 1383606 1384542 . - . ID=Thaps21348;Parent=Thaps21348;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1383606 1384022 . - 0 ID=Thaps21348;Parent=Thaps21348;rank=3 chr2 . exon 1383606 1384022 . - . ID=Thaps21348.3;Parent=Thaps21348;constitutive=1;rank=3 chr2 . CDS 1384115 1384171 . - 0 ID=Thaps21348;Parent=Thaps21348;rank=2 chr2 . exon 1384115 1384171 . - . ID=Thaps21348.2;Parent=Thaps21348;constitutive=1;rank=2 chr2 . CDS 1384261 1384542 . - 0 ID=Thaps21348;Parent=Thaps21348;rank=1 chr2 . exon 1384261 1384542 . - . ID=Thaps21348.1;Parent=Thaps21348;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1379245 1381242 . + . ID=Thaps2593;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUT5];external_name=Thaps2593;logic_name=jgi_thaps3 chr2 ensembl transcript 1379245 1381242 . + . ID=Thaps2593;Parent=Thaps2593;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1379245 1381242 . + 0 ID=Thaps2593;Parent=Thaps2593;rank=1 chr2 . exon 1379245 1381242 . + . ID=Thaps2593.1;Parent=Thaps2593;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1381541 1382077 . - . ID=Thaps2594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUT6];external_name=Thaps2594;logic_name=jgi_thaps3 chr2 ensembl transcript 1381541 1382077 . - . ID=Thaps2594;Parent=Thaps2594;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1381541 1382077 . - 0 ID=Thaps2594;Parent=Thaps2594;rank=1 chr2 . exon 1381541 1382077 . - . ID=Thaps2594.1;Parent=Thaps2594;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1382724 1383173 . + . ID=Thaps2595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUT7];external_name=Thaps2595;logic_name=jgi_thaps3 chr2 ensembl transcript 1382724 1383173 . + . ID=Thaps2595;Parent=Thaps2595;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1382724 1383173 . + 0 ID=Thaps2595;Parent=Thaps2595;rank=1 chr2 . exon 1382724 1383173 . + . ID=Thaps2595.1;Parent=Thaps2595;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1384762 1385547 . + . ID=Thaps2597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUT9];external_name=Thaps2597;logic_name=jgi_thaps3 chr2 ensembl transcript 1384762 1385547 . + . ID=Thaps2597;Parent=Thaps2597;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1384762 1385547 . + 0 ID=Thaps2597;Parent=Thaps2597;rank=1 chr2 . exon 1384762 1385547 . + . ID=Thaps2597.1;Parent=Thaps2597;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1385633 1387609 . - . ID=Thaps2598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUU0];external_name=Thaps2598;logic_name=jgi_thaps3 chr2 ensembl transcript 1385633 1387609 . - . ID=Thaps2598;Parent=Thaps2598;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1385633 1387609 . - 0 ID=Thaps2598;Parent=Thaps2598;rank=1 chr2 . exon 1385633 1387609 . - . ID=Thaps2598.1;Parent=Thaps2598;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1388078 1388371 . + . ID=Thaps32314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUU1];external_name=Thaps32314;logic_name=jgi_thaps3 chr2 ensembl transcript 1388078 1388371 . + . ID=Thaps32314;Parent=Thaps32314;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1388078 1388371 . + 0 ID=Thaps32314;Parent=Thaps32314;rank=1 chr2 . exon 1388078 1388371 . + . ID=Thaps32314.1;Parent=Thaps32314;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1397562 1398749 . - . ID=Thaps21349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUU6];external_name=Thaps21349;logic_name=jgi_thaps3 chr2 ensembl transcript 1397562 1398749 . - . ID=Thaps21349;Parent=Thaps21349;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1397562 1398749 . - 0 ID=Thaps21349;Parent=Thaps21349;rank=1 chr2 . exon 1397562 1398749 . - . ID=Thaps21349.1;Parent=Thaps21349;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1391319 1392893 . - . ID=Thaps2600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUU3];external_name=Thaps2600;logic_name=jgi_thaps3 chr2 ensembl transcript 1391319 1392893 . - . ID=Thaps2600;Parent=Thaps2600;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1391319 1392893 . - 0 ID=Thaps2600;Parent=Thaps2600;rank=1 chr2 . exon 1391319 1392893 . - . ID=Thaps2600.1;Parent=Thaps2600;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1393264 1394016 . + . ID=Thaps2601;biotype=protein_coding;description=Fucoxanthin chl a/c protein%2C lhca clade [Source:UniProtKB/TrEMBL%3BAcc:B8BUU4];external_name=LHCA2;logic_name=jgi_thaps3 chr2 ensembl transcript 1393264 1394016 . + . ID=Thaps2601;Parent=Thaps2601;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1393264 1394016 . + 0 ID=Thaps2601;Parent=Thaps2601;rank=1 chr2 . exon 1393264 1394016 . + . ID=Thaps2601.1;Parent=Thaps2601;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1390724 1391249 . + . ID=Thaps261431;biotype=protein_coding;description=ABC transporter component [Source:UniProtKB/TrEMBL%3BAcc:B8BUU2];external_name=Thaps261431;logic_name=jgi_thaps3 chr2 ensembl transcript 1390724 1391249 . + . ID=Thaps261431;Parent=Thaps261431;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1390724 1391249 . + 0 ID=Thaps261431;Parent=Thaps261431;rank=1 chr2 . exon 1390724 1391249 . + . ID=Thaps261431.1;Parent=Thaps261431;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1394814 1397455 . + . ID=Thaps261433;biotype=protein_coding;description=Elongation factor-2 kinase like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUU5];external_name=Thaps261433;logic_name=jgi_thaps3 chr2 ensembl transcript 1394814 1397455 . + . ID=Thaps261433;Parent=Thaps261433;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1394814 1394866 . + 0 ID=Thaps261433;Parent=Thaps261433;rank=1 chr2 . exon 1394814 1394866 . + . ID=Thaps261433.1;Parent=Thaps261433;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1395019 1395092 . + 0 ID=Thaps261433;Parent=Thaps261433;rank=2 chr2 . exon 1395019 1395092 . + . ID=Thaps261433.2;Parent=Thaps261433;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1395170 1395232 . + 0 ID=Thaps261433;Parent=Thaps261433;rank=3 chr2 . exon 1395170 1395232 . + . ID=Thaps261433.3;Parent=Thaps261433;constitutive=1;rank=3 chr2 . CDS 1395319 1396466 . + 0 ID=Thaps261433;Parent=Thaps261433;rank=4 chr2 . exon 1395319 1396466 . + . ID=Thaps261433.4;Parent=Thaps261433;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1396568 1397024 . + 0 ID=Thaps261433;Parent=Thaps261433;rank=5 chr2 . exon 1396568 1397024 . + . ID=Thaps261433.5;Parent=Thaps261433;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 1397244 1397455 . + 0 ID=Thaps261433;Parent=Thaps261433;rank=6 chr2 . exon 1397244 1397455 . + . ID=Thaps261433.6;Parent=Thaps261433;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . repeat_region 1402472 1402495 . ? . description=trf chr2 ensembl protein_coding_gene 1408151 1409290 . - . ID=Thaps15858;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV3];external_name=Thaps15858;logic_name=jgi_thaps3 chr2 ensembl transcript 1408151 1409290 . - . ID=Thaps15858;Parent=Thaps15858;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1408151 1408418 . - 0 ID=Thaps15858;Parent=Thaps15858;rank=2 chr2 . exon 1408151 1408418 . - . ID=Thaps15858.2;Parent=Thaps15858;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1408482 1409290 . - 0 ID=Thaps15858;Parent=Thaps15858;rank=1 chr2 . exon 1408482 1409290 . - . ID=Thaps15858.1;Parent=Thaps15858;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1404764 1405774 . + . ID=Thaps21351;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV1];external_name=Thaps21351;logic_name=jgi_thaps3 chr2 ensembl transcript 1404764 1405774 . + . ID=Thaps21351;Parent=Thaps21351;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1404764 1405774 . + 0 ID=Thaps21351;Parent=Thaps21351;rank=1 chr2 . exon 1404764 1405774 . + . ID=Thaps21351.1;Parent=Thaps21351;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1399264 1400146 . + . ID=Thaps2604;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUU7];external_name=Thaps2604;logic_name=jgi_thaps3 chr2 ensembl transcript 1399264 1400146 . + . ID=Thaps2604;Parent=Thaps2604;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1399264 1400079 . + 0 ID=Thaps2604;Parent=Thaps2604;rank=1 chr2 . exon 1399264 1400079 . + . ID=Thaps2604.1;Parent=Thaps2604;constitutive=1;rank=1 chr2 . CDS 1400120 1400146 . + 0 ID=Thaps2604;Parent=Thaps2604;rank=2 chr2 . exon 1400120 1400146 . + . ID=Thaps2604.2;Parent=Thaps2604;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1400406 1401764 . - . ID=Thaps2605;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUU8];external_name=Thaps2605;logic_name=jgi_thaps3 chr2 ensembl transcript 1400406 1401764 . - . ID=Thaps2605;Parent=Thaps2605;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1400406 1401764 . - 0 ID=Thaps2605;Parent=Thaps2605;rank=1 chr2 . exon 1400406 1401764 . - . ID=Thaps2605.1;Parent=Thaps2605;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1405915 1407804 . - . ID=Thaps2609;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV2];external_name=Thaps2609;logic_name=jgi_thaps3 chr2 ensembl transcript 1405915 1407804 . - . ID=Thaps2609;Parent=Thaps2609;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1405915 1407804 . - 0 ID=Thaps2609;Parent=Thaps2609;rank=1 chr2 . exon 1405915 1407804 . - . ID=Thaps2609.1;Parent=Thaps2609;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1402326 1402700 . - . ID=Thaps268296;biotype=protein_coding;description=RM12%2C ribosomal protein 12 mitochondrial large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BUU9];external_name=RM12;logic_name=jgi_thaps3 chr2 ensembl transcript 1402326 1402700 . - . ID=Thaps268296;Parent=Thaps268296;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1402326 1402564 . - 0 ID=Thaps268296;Parent=Thaps268296;rank=2 chr2 . exon 1402326 1402564 . - . ID=Thaps268296.2;Parent=Thaps268296;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1402598 1402700 . - 0 ID=Thaps268296;Parent=Thaps268296;rank=1 chr2 . exon 1402598 1402700 . - . ID=Thaps268296.1;Parent=Thaps268296;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1403285 1404223 . + . ID=Thaps31921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV0];external_name=Thaps31921;logic_name=jgi_thaps3 chr2 ensembl transcript 1403285 1404223 . + . ID=Thaps31921;Parent=Thaps31921;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1403285 1403849 . + 0 ID=Thaps31921;Parent=Thaps31921;rank=1 chr2 . exon 1403285 1403849 . + . ID=Thaps31921.1;Parent=Thaps31921;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1404072 1404223 . + 0 ID=Thaps31921;Parent=Thaps31921;rank=2 chr2 . exon 1404072 1404223 . + . ID=Thaps31921.2;Parent=Thaps31921;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 1409636 1409643 . ? . description=dust chr2 ensembl protein_coding_gene 1409949 1412011 . + . ID=Thaps2611;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV4];external_name=Thaps2611;logic_name=jgi_thaps3 chr2 ensembl transcript 1409949 1412011 . + . ID=Thaps2611;Parent=Thaps2611;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1409949 1410717 . + 0 ID=Thaps2611;Parent=Thaps2611;rank=1 chr2 . exon 1409949 1410717 . + . ID=Thaps2611.1;Parent=Thaps2611;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1410798 1412011 . + 0 ID=Thaps2611;Parent=Thaps2611;rank=2 chr2 . exon 1410798 1412011 . + . ID=Thaps2611.2;Parent=Thaps2611;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1412150 1413634 . - . ID=Thaps2612;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV5];external_name=Thaps2612;logic_name=jgi_thaps3 chr2 ensembl transcript 1412150 1413634 . - . ID=Thaps2612;Parent=Thaps2612;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1412150 1413634 . - 0 ID=Thaps2612;Parent=Thaps2612;rank=1 chr2 . exon 1412150 1413634 . - . ID=Thaps2612.1;Parent=Thaps2612;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1414081 1415152 . + . ID=Thaps2613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV6];external_name=Thaps2613;logic_name=jgi_thaps3 chr2 ensembl transcript 1414081 1415152 . + . ID=Thaps2613;Parent=Thaps2613;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1414081 1414446 . + 0 ID=Thaps2613;Parent=Thaps2613;rank=1 chr2 . exon 1414081 1414446 . + . ID=Thaps2613.1;Parent=Thaps2613;constitutive=1;rank=1 chr2 . CDS 1414563 1414643 . + 0 ID=Thaps2613;Parent=Thaps2613;rank=2 chr2 . exon 1414563 1414643 . + . ID=Thaps2613.2;Parent=Thaps2613;constitutive=1;rank=2 chr2 . CDS 1414759 1414863 . + 0 ID=Thaps2613;Parent=Thaps2613;rank=3 chr2 . exon 1414759 1414863 . + . ID=Thaps2613.3;Parent=Thaps2613;constitutive=1;rank=3 chr2 . CDS 1415015 1415152 . + 0 ID=Thaps2613;Parent=Thaps2613;rank=4 chr2 . exon 1415015 1415152 . + . ID=Thaps2613.4;Parent=Thaps2613;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 1416726 1416921 . - . ID=Thaps261437;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV7];external_name=Thaps261437;logic_name=jgi_thaps3 chr2 ensembl transcript 1416726 1416921 . - . ID=Thaps261437;Parent=Thaps261437;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1416726 1416921 . - 0 ID=Thaps261437;Parent=Thaps261437;rank=1 chr2 . exon 1416726 1416921 . - . ID=Thaps261437.1;Parent=Thaps261437;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 1418621 1418751 . ? . description=trf chr2 . repeat_region 1418766 1418819 . ? . description=trf chr2 ensembl protein_coding_gene 1422055 1424434 . + . ID=Thaps21355;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV9];external_name=Thaps21355;logic_name=jgi_thaps3 chr2 ensembl transcript 1422055 1424434 . + . ID=Thaps21355;Parent=Thaps21355;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1422055 1422973 . + 0 ID=Thaps21355;Parent=Thaps21355;rank=1 chr2 . exon 1422055 1422973 . + . ID=Thaps21355.1;Parent=Thaps21355;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1423068 1424434 . + 0 ID=Thaps21355;Parent=Thaps21355;rank=2 chr2 . exon 1423068 1424434 . + . ID=Thaps21355.2;Parent=Thaps21355;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1428143 1428871 . - . ID=Thaps21357;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUW1];external_name=Thaps21357;logic_name=jgi_thaps3 chr2 ensembl transcript 1428143 1428871 . - . ID=Thaps21357;Parent=Thaps21357;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1428143 1428871 . - 0 ID=Thaps21357;Parent=Thaps21357;rank=1 chr2 . exon 1428143 1428871 . - . ID=Thaps21357.1;Parent=Thaps21357;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1421019 1421840 . - . ID=Thaps268300;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUV8];external_name=Thaps268300;logic_name=jgi_thaps3 chr2 ensembl transcript 1421019 1421840 . - . ID=Thaps268300;Parent=Thaps268300;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1421019 1421840 . - 0 ID=Thaps268300;Parent=Thaps268300;rank=1 chr2 . exon 1421019 1421840 . - . ID=Thaps268300.1;Parent=Thaps268300;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1424498 1427391 . - . ID=Thaps268301;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUW0];external_name=Thaps268301;logic_name=jgi_thaps3 chr2 ensembl transcript 1424498 1427391 . - . ID=Thaps268301;Parent=Thaps268301;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1424498 1424777 . - 0 ID=Thaps268301;Parent=Thaps268301;rank=4 chr2 . exon 1424498 1424777 . - . ID=Thaps268301.4;Parent=Thaps268301;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1424853 1426480 . - 0 ID=Thaps268301;Parent=Thaps268301;rank=3 chr2 . exon 1424853 1426480 . - . ID=Thaps268301.3;Parent=Thaps268301;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1426558 1426804 . - 0 ID=Thaps268301;Parent=Thaps268301;rank=2 chr2 . exon 1426558 1426804 . - . ID=Thaps268301.2;Parent=Thaps268301;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1426895 1427391 . - 0 ID=Thaps268301;Parent=Thaps268301;rank=1 chr2 . exon 1426895 1427391 . - . ID=Thaps268301.1;Parent=Thaps268301;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 1434331 1434339 . ? . description=dust chr2 ensembl protein_coding_gene 1429802 1431446 . + . ID=Thaps13996;biotype=protein_coding;description=Ammonium transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BUW2];external_name=AMT2;logic_name=jgi_thaps3 chr2 ensembl transcript 1429802 1431446 . + . ID=Thaps13996;Parent=Thaps13996;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1429802 1430076 . + 0 ID=Thaps13996;Parent=Thaps13996;rank=1 chr2 . exon 1429802 1430076 . + . ID=Thaps13996.1;Parent=Thaps13996;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1430182 1430539 . + 0 ID=Thaps13996;Parent=Thaps13996;rank=2 chr2 . exon 1430182 1430539 . + . ID=Thaps13996.2;Parent=Thaps13996;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1430631 1431106 . + 0 ID=Thaps13996;Parent=Thaps13996;rank=3 chr2 . exon 1430631 1431106 . + . ID=Thaps13996.3;Parent=Thaps13996;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1431194 1431446 . + 0 ID=Thaps13996;Parent=Thaps13996;rank=4 chr2 . exon 1431194 1431446 . + . ID=Thaps13996.4;Parent=Thaps13996;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 1433410 1433977 . - . ID=Thaps2621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUW4];external_name=Thaps2621;logic_name=jgi_thaps3 chr2 ensembl transcript 1433410 1433977 . - . ID=Thaps2621;Parent=Thaps2621;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1433410 1433789 . - 0 ID=Thaps2621;Parent=Thaps2621;rank=2 chr2 . exon 1433410 1433789 . - . ID=Thaps2621.2;Parent=Thaps2621;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1433875 1433977 . - 0 ID=Thaps2621;Parent=Thaps2621;rank=1 chr2 . exon 1433875 1433977 . - . ID=Thaps2621.1;Parent=Thaps2621;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1434378 1435619 . + . ID=Thaps2622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUW5];external_name=Thaps2622;logic_name=jgi_thaps3 chr2 ensembl transcript 1434378 1435619 . + . ID=Thaps2622;Parent=Thaps2622;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1434378 1435619 . + 0 ID=Thaps2622;Parent=Thaps2622;rank=1 chr2 . exon 1434378 1435619 . + . ID=Thaps2622.1;Parent=Thaps2622;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1437289 1439449 . - . ID=Thaps2623;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUW6];external_name=Thaps2623;logic_name=jgi_thaps3 chr2 ensembl transcript 1437289 1439449 . - . ID=Thaps2623;Parent=Thaps2623;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1437289 1437965 . - 0 ID=Thaps2623;Parent=Thaps2623;rank=5 chr2 . exon 1437289 1437965 . - . ID=Thaps2623.5;Parent=Thaps2623;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1438041 1438162 . - 0 ID=Thaps2623;Parent=Thaps2623;rank=4 chr2 . exon 1438041 1438162 . - . ID=Thaps2623.4;Parent=Thaps2623;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1438540 1438834 . - 0 ID=Thaps2623;Parent=Thaps2623;rank=3 chr2 . exon 1438540 1438834 . - . ID=Thaps2623.3;Parent=Thaps2623;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1438941 1439181 . - 0 ID=Thaps2623;Parent=Thaps2623;rank=2 chr2 . CDS 1439267 1439449 . - 0 ID=Thaps2623;Parent=Thaps2623;rank=1 chr2 ensembl protein_coding_gene 1432249 1433049 . + . ID=Thaps268304;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUW3];external_name=Thaps268304;logic_name=jgi_thaps3 chr2 ensembl transcript 1432249 1433049 . + . ID=Thaps268304;Parent=Thaps268304;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1432249 1432369 . + 0 ID=Thaps268304;Parent=Thaps268304;rank=1 chr2 . exon 1432249 1432369 . + . ID=Thaps268304.1;Parent=Thaps268304;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1432604 1433049 . + 0 ID=Thaps268304;Parent=Thaps268304;rank=2 chr2 . exon 1432604 1433049 . + . ID=Thaps268304.2;Parent=Thaps268304;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1441734 1442579 . + . ID=Thaps16265;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUW8];external_name=Thaps16265;logic_name=jgi_thaps3 chr2 ensembl transcript 1441734 1442579 . + . ID=Thaps16265;Parent=Thaps16265;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1441734 1442063 . + 0 ID=Thaps16265;Parent=Thaps16265;rank=1 chr2 . exon 1441734 1442063 . + . ID=Thaps16265.1;Parent=Thaps16265;constitutive=1;rank=1 chr2 . CDS 1442169 1442397 . + 0 ID=Thaps16265;Parent=Thaps16265;rank=2 chr2 . exon 1442169 1442397 . + . ID=Thaps16265.2;Parent=Thaps16265;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1442452 1442579 . + 0 ID=Thaps16265;Parent=Thaps16265;rank=3 chr2 . exon 1442452 1442579 . + . ID=Thaps16265.3;Parent=Thaps16265;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 1439770 1440372 . + . ID=Thaps21360;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUW7];external_name=Thaps21360;logic_name=jgi_thaps3 chr2 ensembl transcript 1439770 1440372 . + . ID=Thaps21360;Parent=Thaps21360;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1439770 1440372 . + 0 ID=Thaps21360;Parent=Thaps21360;rank=1 chr2 . exon 1439770 1440372 . + . ID=Thaps21360.1;Parent=Thaps21360;constitutive=1;rank=1 chr2 . exon 1438941 1439181 . - . ID=Thaps2623.2;Parent=Thaps2623;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . exon 1439267 1439449 . - . ID=Thaps2623.1;Parent=Thaps2623;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1447898 1448857 . - . ID=Thaps2628;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUX1];external_name=Thaps2628;logic_name=jgi_thaps3 chr2 ensembl transcript 1447898 1448857 . - . ID=Thaps2628;Parent=Thaps2628;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1447898 1448857 . - 0 ID=Thaps2628;Parent=Thaps2628;rank=1 chr2 . exon 1447898 1448857 . - . ID=Thaps2628.1;Parent=Thaps2628;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1443344 1444067 . - . ID=Thaps31785;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUW9];external_name=Thaps31785;logic_name=jgi_thaps3 chr2 ensembl transcript 1443344 1444067 . - . ID=Thaps31785;Parent=Thaps31785;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1443344 1443688 . - 0 ID=Thaps31785;Parent=Thaps31785;rank=3 chr2 . exon 1443344 1443688 . - . ID=Thaps31785.3;Parent=Thaps31785;constitutive=1;rank=3 chr2 . CDS 1443775 1443828 . - 0 ID=Thaps31785;Parent=Thaps31785;rank=2 chr2 . exon 1443775 1443828 . - . ID=Thaps31785.2;Parent=Thaps31785;constitutive=1;rank=2 chr2 . CDS 1443912 1444067 . - 0 ID=Thaps31785;Parent=Thaps31785;rank=1 chr2 . exon 1443912 1444067 . - . ID=Thaps31785.1;Parent=Thaps31785;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1445990 1447588 . + . ID=Thaps32230;biotype=protein_coding;description=Mitogen activated kinase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUX0];external_name=MAPK;logic_name=jgi_thaps3 chr2 ensembl transcript 1445990 1447588 . + . ID=Thaps32230;Parent=Thaps32230;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1445990 1446088 . + 0 ID=Thaps32230;Parent=Thaps32230;rank=1 chr2 . exon 1445990 1446088 . + . ID=Thaps32230.1;Parent=Thaps32230;constitutive=1;rank=1 chr2 . CDS 1446146 1446473 . + 0 ID=Thaps32230;Parent=Thaps32230;rank=2 chr2 . exon 1446146 1446473 . + . ID=Thaps32230.2;Parent=Thaps32230;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1446557 1446581 . + 0 ID=Thaps32230;Parent=Thaps32230;rank=3 chr2 . exon 1446557 1446581 . + . ID=Thaps32230.3;Parent=Thaps32230;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1446750 1447275 . + 0 ID=Thaps32230;Parent=Thaps32230;rank=4 chr2 . exon 1446750 1447275 . + . ID=Thaps32230.4;Parent=Thaps32230;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1447358 1447588 . + 0 ID=Thaps32230;Parent=Thaps32230;rank=5 chr2 . exon 1447358 1447588 . + . ID=Thaps32230.5;Parent=Thaps32230;constitutive=1;rank=5 chr2 . repeat_region 1449014 1449024 . ? . description=dust chr2 ensembl protein_coding_gene 1449174 1450244 . + . ID=Thaps21362;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUX2];external_name=Thaps21362;logic_name=jgi_thaps3 chr2 ensembl transcript 1449174 1450244 . + . ID=Thaps21362;Parent=Thaps21362;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1449174 1450244 . + 0 ID=Thaps21362;Parent=Thaps21362;rank=1 chr2 . exon 1449174 1450244 . + . ID=Thaps21362.1;Parent=Thaps21362;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1450400 1451158 . - . ID=Thaps21363;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUX3];external_name=Thaps21363;logic_name=jgi_thaps3 chr2 ensembl transcript 1450400 1451158 . - . ID=Thaps21363;Parent=Thaps21363;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1450400 1451158 . - 0 ID=Thaps21363;Parent=Thaps21363;rank=1 chr2 . exon 1450400 1451158 . - . ID=Thaps21363.1;Parent=Thaps21363;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1451340 1456767 . + . ID=Thaps21364;biotype=protein_coding;description=Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8BUX4];external_name=Thaps21364;logic_name=jgi_thaps3 chr2 ensembl transcript 1451340 1456767 . + . ID=Thaps21364;Parent=Thaps21364;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1451340 1451802 . + 0 ID=Thaps21364;Parent=Thaps21364;rank=1 chr2 . exon 1451340 1451802 . + . ID=Thaps21364.1;Parent=Thaps21364;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1451881 1452864 . + 0 ID=Thaps21364;Parent=Thaps21364;rank=2 chr2 . exon 1451881 1452864 . + . ID=Thaps21364.2;Parent=Thaps21364;constitutive=1;rank=2 chr2 . CDS 1452971 1453909 . + 0 ID=Thaps21364;Parent=Thaps21364;rank=3 chr2 . exon 1452971 1453909 . + . ID=Thaps21364.3;Parent=Thaps21364;constitutive=1;rank=3 chr2 . CDS 1454121 1454629 . + 0 ID=Thaps21364;Parent=Thaps21364;rank=4 chr2 . exon 1454121 1454629 . + . ID=Thaps21364.4;Parent=Thaps21364;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1454820 1456583 . + 0 ID=Thaps21364;Parent=Thaps21364;rank=5 chr2 . exon 1454820 1456583 . + . ID=Thaps21364.5;Parent=Thaps21364;constitutive=1;rank=5 chr2 . CDS 1456696 1456767 . + 0 ID=Thaps21364;Parent=Thaps21364;rank=6 chr2 . exon 1456696 1456767 . + . ID=Thaps21364.6;Parent=Thaps21364;constitutive=1;rank=6 chr2 ensembl protein_coding_gene 1458193 1459405 . + . ID=Thaps2632;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUX5];external_name=Thaps2632;logic_name=jgi_thaps3 chr2 ensembl transcript 1458193 1459405 . + . ID=Thaps2632;Parent=Thaps2632;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1458193 1458620 . + 0 ID=Thaps2632;Parent=Thaps2632;rank=1 chr2 . exon 1458193 1458620 . + . ID=Thaps2632.1;Parent=Thaps2632;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1458716 1459196 . + 0 ID=Thaps2632;Parent=Thaps2632;rank=2 chr2 . CDS 1459277 1459405 . + 0 ID=Thaps2632;Parent=Thaps2632;rank=3 chr2 . exon 1458716 1459196 . + . ID=Thaps2632.2;Parent=Thaps2632;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . exon 1459277 1459405 . + . ID=Thaps2632.3;Parent=Thaps2632;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1459514 1460171 . - . ID=Thaps2633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUX6];external_name=Thaps2633;logic_name=jgi_thaps3 chr2 ensembl transcript 1459514 1460171 . - . ID=Thaps2633;Parent=Thaps2633;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1459514 1459602 . - 0 ID=Thaps2633;Parent=Thaps2633;rank=3 chr2 . exon 1459514 1459602 . - . ID=Thaps2633.3;Parent=Thaps2633;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1459681 1459803 . - 0 ID=Thaps2633;Parent=Thaps2633;rank=2 chr2 . exon 1459681 1459803 . - . ID=Thaps2633.2;Parent=Thaps2633;constitutive=1;rank=2 chr2 . CDS 1459841 1460171 . - 0 ID=Thaps2633;Parent=Thaps2633;rank=1 chr2 . exon 1459841 1460171 . - . ID=Thaps2633.1;Parent=Thaps2633;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1461159 1462016 . - . ID=Thaps2634;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUX7];external_name=Thaps2634;logic_name=jgi_thaps3 chr2 ensembl transcript 1461159 1462016 . - . ID=Thaps2634;Parent=Thaps2634;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1461159 1461206 . - 0 ID=Thaps2634;Parent=Thaps2634;rank=3 chr2 . exon 1461159 1461206 . - . ID=Thaps2634.3;Parent=Thaps2634;constitutive=1;rank=3 chr2 . CDS 1461324 1461543 . - 0 ID=Thaps2634;Parent=Thaps2634;rank=2 chr2 . exon 1461324 1461543 . - . ID=Thaps2634.2;Parent=Thaps2634;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1461643 1462016 . - 0 ID=Thaps2634;Parent=Thaps2634;rank=1 chr2 . exon 1461643 1462016 . - . ID=Thaps2634.1;Parent=Thaps2634;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1465295 1468945 . - . ID=Thaps2635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUX8];external_name=Thaps2635;logic_name=jgi_thaps3 chr2 ensembl transcript 1465295 1468945 . - . ID=Thaps2635;Parent=Thaps2635;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1465295 1465412 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=12 chr2 . exon 1465295 1465412 . - . ID=Thaps2635.12;Parent=Thaps2635;constitutive=1;ensembl_end_phase=1;rank=12 chr2 . CDS 1465508 1465664 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=11 chr2 . exon 1465508 1465664 . - . ID=Thaps2635.11;Parent=Thaps2635;constitutive=1;ensembl_end_phase=1;rank=11 chr2 . CDS 1465746 1465899 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=10 chr2 . exon 1465746 1465899 . - . ID=Thaps2635.10;Parent=Thaps2635;constitutive=1;ensembl_end_phase=1;rank=10 chr2 . CDS 1466156 1466802 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=9 chr2 . exon 1466156 1466802 . - . ID=Thaps2635.9;Parent=Thaps2635;constitutive=1;ensembl_end_phase=2;rank=9 chr2 . CDS 1466986 1467069 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=8 chr2 . exon 1466986 1467069 . - . ID=Thaps2635.8;Parent=Thaps2635;constitutive=1;rank=8 chr2 . CDS 1467155 1467178 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=7 chr2 . exon 1467155 1467178 . - . ID=Thaps2635.7;Parent=Thaps2635;constitutive=1;rank=7 chr2 . CDS 1467384 1467449 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=6 chr2 . exon 1467384 1467449 . - . ID=Thaps2635.6;Parent=Thaps2635;constitutive=1;rank=6 chr2 . CDS 1467535 1467679 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=5 chr2 . exon 1467535 1467679 . - . ID=Thaps2635.5;Parent=Thaps2635;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 1467757 1467793 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=4 chr2 . exon 1467757 1467793 . - . ID=Thaps2635.4;Parent=Thaps2635;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1467979 1468020 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=3 chr2 . exon 1467979 1468020 . - . ID=Thaps2635.3;Parent=Thaps2635;constitutive=1;rank=3 chr2 . CDS 1468104 1468401 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=2 chr2 . exon 1468104 1468401 . - . ID=Thaps2635.2;Parent=Thaps2635;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1468498 1468945 . - 0 ID=Thaps2635;Parent=Thaps2635;rank=1 chr2 . exon 1468498 1468945 . - . ID=Thaps2635.1;Parent=Thaps2635;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1470444 1471336 . + . ID=Thaps261447;biotype=protein_coding;description=D-Amino acid dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BUX9];external_name=Thaps261447;logic_name=jgi_thaps3 chr2 ensembl transcript 1470444 1471336 . + . ID=Thaps261447;Parent=Thaps261447;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1470444 1471336 . + 0 ID=Thaps261447;Parent=Thaps261447;rank=1 chr2 . exon 1470444 1471336 . + . ID=Thaps261447.1;Parent=Thaps261447;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1473660 1476620 . - . ID=Thaps261448;biotype=protein_coding;description=Trehalose-6-phosphate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BUY1];external_name=Thaps261448;logic_name=jgi_thaps3 chr2 ensembl transcript 1473660 1476620 . - . ID=Thaps261448;Parent=Thaps261448;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1473660 1474125 . - 0 ID=Thaps261448;Parent=Thaps261448;rank=8 chr2 . exon 1473660 1474125 . - . ID=Thaps261448.8;Parent=Thaps261448;constitutive=1;ensembl_end_phase=1;rank=8 chr2 . CDS 1474212 1474437 . - 0 ID=Thaps261448;Parent=Thaps261448;rank=7 chr2 . exon 1474212 1474437 . - . ID=Thaps261448.7;Parent=Thaps261448;constitutive=1;ensembl_end_phase=1;rank=7 chr2 . CDS 1474468 1475017 . - 0 ID=Thaps261448;Parent=Thaps261448;rank=6 chr2 . exon 1474468 1475017 . - . ID=Thaps261448.6;Parent=Thaps261448;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 1475088 1475136 . - 0 ID=Thaps261448;Parent=Thaps261448;rank=5 chr2 . exon 1475088 1475136 . - . ID=Thaps261448.5;Parent=Thaps261448;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 1475214 1475741 . - 0 ID=Thaps261448;Parent=Thaps261448;rank=4 chr2 . exon 1475214 1475741 . - . ID=Thaps261448.4;Parent=Thaps261448;constitutive=1;rank=4 chr2 . CDS 1475829 1475985 . - 0 ID=Thaps261448;Parent=Thaps261448;rank=3 chr2 . exon 1475829 1475985 . - . ID=Thaps261448.3;Parent=Thaps261448;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1476094 1476113 . - 0 ID=Thaps261448;Parent=Thaps261448;rank=2 chr2 . exon 1476094 1476113 . - . ID=Thaps261448.2;Parent=Thaps261448;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1476291 1476620 . - 0 ID=Thaps261448;Parent=Thaps261448;rank=1 chr2 . exon 1476291 1476620 . - . ID=Thaps261448.1;Parent=Thaps261448;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1471990 1473537 . + . ID=Thaps2637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUY0];external_name=Thaps2637;logic_name=jgi_thaps3 chr2 ensembl transcript 1471990 1473537 . + . ID=Thaps2637;Parent=Thaps2637;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1471990 1473537 . + 0 ID=Thaps2637;Parent=Thaps2637;rank=1 chr2 . exon 1471990 1473537 . + . ID=Thaps2637.1;Parent=Thaps2637;constitutive=1;rank=1 chr2 . repeat_region 1481565 1481573 . ? . description=dust chr2 . repeat_region 1482975 1483023 . ? . description=trf chr2 . repeat_region 1483294 1483340 . ? . description=trf chr2 ensembl protein_coding_gene 1478575 1479880 . + . ID=Thaps15972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUY2];external_name=Thaps15972;logic_name=jgi_thaps3 chr2 ensembl transcript 1478575 1479880 . + . ID=Thaps15972;Parent=Thaps15972;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1478575 1479316 . + 0 ID=Thaps15972;Parent=Thaps15972;rank=1 chr2 . exon 1478575 1479316 . + . ID=Thaps15972.1;Parent=Thaps15972;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1479427 1479561 . + 0 ID=Thaps15972;Parent=Thaps15972;rank=2 chr2 . exon 1479427 1479561 . + . ID=Thaps15972.2;Parent=Thaps15972;constitutive=1;rank=2 chr2 . CDS 1479843 1479880 . + 0 ID=Thaps15972;Parent=Thaps15972;rank=3 chr2 . exon 1479843 1479880 . + . ID=Thaps15972.3;Parent=Thaps15972;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 1486955 1489858 . - . ID=Thaps21368;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUY6];external_name=Thaps21368;logic_name=jgi_thaps3 chr2 ensembl transcript 1486955 1489858 . - . ID=Thaps21368;Parent=Thaps21368;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1486955 1489858 . - 0 ID=Thaps21368;Parent=Thaps21368;rank=1 chr2 . exon 1486955 1489858 . - . ID=Thaps21368.1;Parent=Thaps21368;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1481698 1482630 . + . ID=Thaps2641;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUY3];external_name=Thaps2641;logic_name=jgi_thaps3 chr2 ensembl transcript 1481698 1482630 . + . ID=Thaps2641;Parent=Thaps2641;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1481698 1482630 . + 0 ID=Thaps2641;Parent=Thaps2641;rank=1 chr2 . exon 1481698 1482630 . + . ID=Thaps2641.1;Parent=Thaps2641;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1482954 1483754 . - . ID=Thaps2642;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUY4];external_name=Thaps2642;logic_name=jgi_thaps3 chr2 ensembl transcript 1482954 1483754 . - . ID=Thaps2642;Parent=Thaps2642;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1482954 1483754 . - 0 ID=Thaps2642;Parent=Thaps2642;rank=1 chr2 . exon 1482954 1483754 . - . ID=Thaps2642.1;Parent=Thaps2642;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1485342 1486799 . + . ID=Thaps39592;biotype=protein_coding;description=Nitrate transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BUY5];external_name=NRT3;logic_name=jgi_thaps3 chr2 ensembl transcript 1485342 1486799 . + . ID=Thaps39592;Parent=Thaps39592;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1485342 1486799 . + 0 ID=Thaps39592;Parent=Thaps39592;rank=1 chr2 . exon 1485342 1486799 . + . ID=Thaps39592.1;Parent=Thaps39592;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1493155 1493535 . - . ID=Thaps261451;biotype=protein_coding;description=Phosphatidate phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BUY8];external_name=Thaps261451;logic_name=jgi_thaps3 chr2 ensembl transcript 1493155 1493535 . - . ID=Thaps261451;Parent=Thaps261451;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1493155 1493535 . - 0 ID=Thaps261451;Parent=Thaps261451;rank=1 chr2 . exon 1493155 1493535 . - . ID=Thaps261451.1;Parent=Thaps261451;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1490377 1492710 . + . ID=Thaps2645;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUY7];external_name=Thaps2645;logic_name=jgi_thaps3 chr2 ensembl transcript 1490377 1492710 . + . ID=Thaps2645;Parent=Thaps2645;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1490377 1492710 . + 0 ID=Thaps2645;Parent=Thaps2645;rank=1 chr2 . exon 1490377 1492710 . + . ID=Thaps2645.1;Parent=Thaps2645;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1494582 1496618 . + . ID=Thaps2646;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUY9];external_name=Thaps2646;logic_name=jgi_thaps3 chr2 ensembl transcript 1494582 1496618 . + . ID=Thaps2646;Parent=Thaps2646;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1494582 1496618 . + 0 ID=Thaps2646;Parent=Thaps2646;rank=1 chr2 . exon 1494582 1496618 . + . ID=Thaps2646.1;Parent=Thaps2646;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1497142 1498173 . + . ID=Thaps2647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ0];external_name=Thaps2647;logic_name=jgi_thaps3 chr2 ensembl transcript 1497142 1498173 . + . ID=Thaps2647;Parent=Thaps2647;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1497142 1498173 . + 0 ID=Thaps2647;Parent=Thaps2647;rank=1 chr2 . exon 1497142 1498173 . + . ID=Thaps2647.1;Parent=Thaps2647;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1503547 1510720 . - . ID=Thaps21370;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ4];external_name=Thaps21370;logic_name=jgi_thaps3 chr2 ensembl transcript 1503547 1510720 . - . ID=Thaps21370;Parent=Thaps21370;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1503547 1504161 . - 0 ID=Thaps21370;Parent=Thaps21370;rank=6 chr2 . exon 1503547 1504161 . - . ID=Thaps21370.6;Parent=Thaps21370;constitutive=1;rank=6 chr2 . CDS 1504235 1504764 . - 0 ID=Thaps21370;Parent=Thaps21370;rank=5 chr2 . exon 1504235 1504764 . - . ID=Thaps21370.5;Parent=Thaps21370;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1504852 1504980 . - 0 ID=Thaps21370;Parent=Thaps21370;rank=4 chr2 . exon 1504852 1504980 . - . ID=Thaps21370.4;Parent=Thaps21370;constitutive=1;rank=4 chr2 . CDS 1505061 1506553 . - 0 ID=Thaps21370;Parent=Thaps21370;rank=3 chr2 . exon 1505061 1506553 . - . ID=Thaps21370.3;Parent=Thaps21370;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1506638 1508379 . - 0 ID=Thaps21370;Parent=Thaps21370;rank=2 chr2 . exon 1506638 1508379 . - . ID=Thaps21370.2;Parent=Thaps21370;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1508459 1510720 . - 0 ID=Thaps21370;Parent=Thaps21370;rank=1 chr2 . exon 1508459 1510720 . - . ID=Thaps21370.1;Parent=Thaps21370;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1501824 1502031 . + . ID=Thaps261453;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ3];external_name=Thaps261453;logic_name=jgi_thaps3 chr2 ensembl transcript 1501824 1502031 . + . ID=Thaps261453;Parent=Thaps261453;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1501824 1502031 . + 0 ID=Thaps261453;Parent=Thaps261453;rank=1 chr2 . exon 1501824 1502031 . + . ID=Thaps261453.1;Parent=Thaps261453;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1498717 1499586 . - . ID=Thaps2648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ1];external_name=Thaps2648;logic_name=jgi_thaps3 chr2 ensembl transcript 1498717 1499586 . - . ID=Thaps2648;Parent=Thaps2648;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1498717 1499586 . - 0 ID=Thaps2648;Parent=Thaps2648;rank=1 chr2 . exon 1498717 1499586 . - . ID=Thaps2648.1;Parent=Thaps2648;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1500125 1500934 . - . ID=Thaps2649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ2];external_name=Thaps2649;logic_name=jgi_thaps3 chr2 ensembl transcript 1500125 1500934 . - . ID=Thaps2649;Parent=Thaps2649;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1500125 1500934 . - 0 ID=Thaps2649;Parent=Thaps2649;rank=1 chr2 . exon 1500125 1500934 . - . ID=Thaps2649.1;Parent=Thaps2649;constitutive=1;rank=1 chr2 . repeat_region 1509332 1509364 . ? . description=trf chr2 . repeat_region 1509468 1509527 . ? . description=trf chr2 ensembl protein_coding_gene 1511254 1514166 . - . ID=Thaps21371;biotype=protein_coding;description=Spermidine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ5];external_name=Thaps21371;logic_name=jgi_thaps3 chr2 ensembl transcript 1511254 1514166 . - . ID=Thaps21371;Parent=Thaps21371;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1511254 1514166 . - 0 ID=Thaps21371;Parent=Thaps21371;rank=1 chr2 . exon 1511254 1514166 . - . ID=Thaps21371.1;Parent=Thaps21371;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1514597 1520968 . + . ID=Thaps2653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ6];external_name=Thaps2653;logic_name=jgi_thaps3 chr2 ensembl transcript 1514597 1520968 . + . ID=Thaps2653;Parent=Thaps2653;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1514597 1515853 . + 0 ID=Thaps2653;Parent=Thaps2653;rank=1 chr2 . exon 1514597 1515853 . + . ID=Thaps2653.1;Parent=Thaps2653;constitutive=1;rank=1 chr2 . CDS 1515946 1517121 . + 0 ID=Thaps2653;Parent=Thaps2653;rank=2 chr2 . exon 1515946 1517121 . + . ID=Thaps2653.2;Parent=Thaps2653;constitutive=1;rank=2 chr2 . CDS 1517459 1517947 . + 0 ID=Thaps2653;Parent=Thaps2653;rank=3 chr2 . exon 1517459 1517947 . + . ID=Thaps2653.3;Parent=Thaps2653;constitutive=1;rank=3 chr2 . CDS 1518038 1520968 . + 0 ID=Thaps2653;Parent=Thaps2653;rank=4 chr2 . exon 1518038 1520968 . + . ID=Thaps2653.4;Parent=Thaps2653;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 1526642 1527514 . - . ID=Thaps15887;biotype=protein_coding;description=Cdc2/cdc28 protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ9];external_name=Thaps15887;logic_name=jgi_thaps3 chr2 ensembl transcript 1526642 1527514 . - . ID=Thaps15887;Parent=Thaps15887;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1526642 1527514 . - 0 ID=Thaps15887;Parent=Thaps15887;rank=1 chr2 . exon 1526642 1527514 . - . ID=Thaps15887.1;Parent=Thaps15887;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1525452 1526300 . + . ID=Thaps261462;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ8];external_name=Thaps261462;logic_name=jgi_thaps3 chr2 ensembl transcript 1525452 1526300 . + . ID=Thaps261462;Parent=Thaps261462;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1525452 1525602 . + 0 ID=Thaps261462;Parent=Thaps261462;rank=1 chr2 . exon 1525452 1525602 . + . ID=Thaps261462.1;Parent=Thaps261462;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1525651 1526300 . + 0 ID=Thaps261462;Parent=Thaps261462;rank=2 chr2 . exon 1525651 1526300 . + . ID=Thaps261462.2;Parent=Thaps261462;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1521748 1522317 . + . ID=Thaps268311;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BUZ7];external_name=Thaps268311;logic_name=jgi_thaps3 chr2 ensembl transcript 1521748 1522317 . + . ID=Thaps268311;Parent=Thaps268311;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1521748 1522201 . + 0 ID=Thaps268311;Parent=Thaps268311;rank=1 chr2 . exon 1521748 1522201 . + . ID=Thaps268311.1;Parent=Thaps268311;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1522202 1522317 . + 0 ID=Thaps268311;Parent=Thaps268311;rank=2 chr2 . exon 1522202 1522317 . + . ID=Thaps268311.2;Parent=Thaps268311;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 1532088 1532095 . ? . description=dust chr2 . repeat_region 1535140 1538673 . + . description=Copia7I_TP chr2 ensembl protein_coding_gene 1530507 1531932 . - . ID=Thaps21374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV01];external_name=Thaps21374;logic_name=jgi_thaps3 chr2 ensembl transcript 1530507 1531932 . - . ID=Thaps21374;Parent=Thaps21374;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1530507 1531180 . - 0 ID=Thaps21374;Parent=Thaps21374;rank=3 chr2 . exon 1530507 1531180 . - . ID=Thaps21374.3;Parent=Thaps21374;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1531301 1531732 . - 0 ID=Thaps21374;Parent=Thaps21374;rank=2 chr2 . exon 1531301 1531732 . - . ID=Thaps21374.2;Parent=Thaps21374;constitutive=1;rank=2 chr2 . CDS 1531869 1531932 . - 0 ID=Thaps21374;Parent=Thaps21374;rank=1 chr2 . exon 1531869 1531932 . - . ID=Thaps21374.1;Parent=Thaps21374;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1529201 1530462 . + . ID=Thaps2657;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV00];external_name=Thaps2657;logic_name=jgi_thaps3 chr2 ensembl transcript 1529201 1530462 . + . ID=Thaps2657;Parent=Thaps2657;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1529201 1529861 . + 0 ID=Thaps2657;Parent=Thaps2657;rank=1 chr2 . exon 1529201 1529861 . + . ID=Thaps2657.1;Parent=Thaps2657;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1529933 1530462 . + 0 ID=Thaps2657;Parent=Thaps2657;rank=2 chr2 . exon 1529933 1530462 . + . ID=Thaps2657.2;Parent=Thaps2657;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1532551 1534014 . + . ID=Thaps2659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV02];external_name=Thaps2659;logic_name=jgi_thaps3 chr2 ensembl transcript 1532551 1534014 . + . ID=Thaps2659;Parent=Thaps2659;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1532551 1532616 . + 0 ID=Thaps2659;Parent=Thaps2659;rank=1 chr2 . exon 1532551 1532616 . + . ID=Thaps2659.1;Parent=Thaps2659;constitutive=1;rank=1 chr2 . CDS 1532693 1533640 . + 0 ID=Thaps2659;Parent=Thaps2659;rank=2 chr2 . exon 1532693 1533640 . + . ID=Thaps2659.2;Parent=Thaps2659;constitutive=1;rank=2 chr2 . CDS 1533766 1534014 . + 0 ID=Thaps2659;Parent=Thaps2659;rank=3 chr2 . exon 1533766 1534014 . + . ID=Thaps2659.3;Parent=Thaps2659;constitutive=1;rank=3 chr2 . repeat_region 1540483 1540550 . ? . description=trf chr2 . repeat_region 1542240 1542265 . ? . description=trf chr2 . repeat_region 1544032 1544157 . ? . description=trf chr2 ensembl protein_coding_gene 1540339 1545318 . - . ID=Thaps21375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV04];external_name=Thaps21375;logic_name=jgi_thaps3 chr2 ensembl transcript 1540339 1545318 . - . ID=Thaps21375;Parent=Thaps21375;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1540339 1545318 . - 0 ID=Thaps21375;Parent=Thaps21375;rank=1 chr2 . exon 1540339 1545318 . - . ID=Thaps21375.1;Parent=Thaps21375;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1545876 1546878 . - . ID=Thaps21376;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV05];external_name=Thaps21376;logic_name=jgi_thaps3 chr2 ensembl transcript 1545876 1546878 . - . ID=Thaps21376;Parent=Thaps21376;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1545876 1546621 . - 0 ID=Thaps21376;Parent=Thaps21376;rank=2 chr2 . exon 1545876 1546621 . - . ID=Thaps21376.2;Parent=Thaps21376;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1546668 1546878 . - 0 ID=Thaps21376;Parent=Thaps21376;rank=1 chr2 . exon 1546668 1546878 . - . ID=Thaps21376.1;Parent=Thaps21376;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1539518 1540034 . + . ID=Thaps2660;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV03];external_name=Thaps2660;logic_name=jgi_thaps3 chr2 ensembl transcript 1539518 1540034 . + . ID=Thaps2660;Parent=Thaps2660;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1539518 1539825 . + 0 ID=Thaps2660;Parent=Thaps2660;rank=1 chr2 . exon 1539518 1539825 . + . ID=Thaps2660.1;Parent=Thaps2660;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1539911 1540034 . + 0 ID=Thaps2660;Parent=Thaps2660;rank=2 chr2 . exon 1539911 1540034 . + . ID=Thaps2660.2;Parent=Thaps2660;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1547195 1549249 . + . ID=Thaps2663;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV06];external_name=Thaps2663;logic_name=jgi_thaps3 chr2 ensembl transcript 1547195 1549249 . + . ID=Thaps2663;Parent=Thaps2663;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1547195 1547759 . + 0 ID=Thaps2663;Parent=Thaps2663;rank=1 chr2 . exon 1547195 1547759 . + . ID=Thaps2663.1;Parent=Thaps2663;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1547937 1549249 . + 0 ID=Thaps2663;Parent=Thaps2663;rank=2 chr2 . exon 1547937 1549249 . + . ID=Thaps2663.2;Parent=Thaps2663;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 1553261 1553289 . ? . description=dust chr2 ensembl gene 1554270 1556098 . + . ID=Thaps261466;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr2 ensembl transcript 1554270 1556098 . + . ID=Thaps261466;Parent=Thaps261466;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr2 . exon 1554270 1554505 . + . ID=Thaps261466.1;Parent=Thaps261466;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . exon 1554761 1555437 . + . ID=Thaps261466.2;Parent=Thaps261466;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . exon 1555723 1555850 . + . ID=Thaps261466.3;Parent=Thaps261466;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . exon 1555952 1556098 . + . ID=Thaps261466.4;Parent=Thaps261466;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 1557934 1559867 . + . ID=Thaps2666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV09];external_name=Thaps2666;logic_name=jgi_thaps3 chr2 ensembl transcript 1557934 1559867 . + . ID=Thaps2666;Parent=Thaps2666;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1557934 1559578 . + 0 ID=Thaps2666;Parent=Thaps2666;rank=1 chr2 . exon 1557934 1559578 . + . ID=Thaps2666.1;Parent=Thaps2666;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1559653 1559867 . + 0 ID=Thaps2666;Parent=Thaps2666;rank=2 chr2 ensembl protein_coding_gene 1551090 1552129 . + . ID=Thaps268314;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV07];external_name=Thaps268314;logic_name=jgi_thaps3 chr2 ensembl transcript 1551090 1552129 . + . ID=Thaps268314;Parent=Thaps268314;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1551090 1551377 . + 0 ID=Thaps268314;Parent=Thaps268314;rank=1 chr2 . exon 1551090 1551377 . + . ID=Thaps268314.1;Parent=Thaps268314;constitutive=1;rank=1 chr2 . CDS 1551542 1552129 . + 0 ID=Thaps268314;Parent=Thaps268314;rank=2 chr2 . exon 1551542 1552129 . + . ID=Thaps268314.2;Parent=Thaps268314;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1556922 1557590 . + . ID=Thaps268315;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV08];external_name=Thaps268315;logic_name=jgi_thaps3 chr2 ensembl transcript 1556922 1557590 . + . ID=Thaps268315;Parent=Thaps268315;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1556922 1557590 . + 0 ID=Thaps268315;Parent=Thaps268315;rank=1 chr2 . exon 1556922 1557590 . + . ID=Thaps268315.1;Parent=Thaps268315;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1561118 1563130 . - . ID=Thaps21381;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV11];external_name=Thaps21381;logic_name=jgi_thaps3 chr2 ensembl transcript 1561118 1563130 . - . ID=Thaps21381;Parent=Thaps21381;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1561118 1563130 . - 0 ID=Thaps21381;Parent=Thaps21381;rank=1 chr2 . exon 1561118 1563130 . - . ID=Thaps21381.1;Parent=Thaps21381;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1567750 1568631 . - . ID=Thaps261470;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV13];external_name=Thaps261470;logic_name=jgi_thaps3 chr2 ensembl transcript 1567750 1568631 . - . ID=Thaps261470;Parent=Thaps261470;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1567750 1568631 . - 0 ID=Thaps261470;Parent=Thaps261470;rank=1 chr2 . exon 1567750 1568631 . - . ID=Thaps261470.1;Parent=Thaps261470;constitutive=1;rank=1 chr2 . exon 1559653 1559867 . + . ID=Thaps2666.2;Parent=Thaps2666;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1563706 1564726 . + . ID=Thaps2669;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV12];external_name=Thaps2669;logic_name=jgi_thaps3 chr2 ensembl transcript 1563706 1564726 . + . ID=Thaps2669;Parent=Thaps2669;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1563706 1563920 . + 0 ID=Thaps2669;Parent=Thaps2669;rank=1 chr2 . exon 1563706 1563920 . + . ID=Thaps2669.1;Parent=Thaps2669;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1564018 1564726 . + 0 ID=Thaps2669;Parent=Thaps2669;rank=2 chr2 . exon 1564018 1564726 . + . ID=Thaps2669.2;Parent=Thaps2669;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1559967 1560938 . - . ID=Thaps268316;biotype=protein_coding;description=Ca2+-dependent membrane-binding protein annexin [Source:UniProtKB/TrEMBL%3BAcc:B8BV10];external_name=Thaps268316;logic_name=jgi_thaps3 chr2 ensembl transcript 1559967 1560938 . - . ID=Thaps268316;Parent=Thaps268316;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1559967 1560938 . - 0 ID=Thaps268316;Parent=Thaps268316;rank=1 chr2 . exon 1559967 1560938 . - . ID=Thaps268316.1;Parent=Thaps268316;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1570853 1571830 . - . ID=Thaps21383;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV15];external_name=Thaps21383;logic_name=jgi_thaps3 chr2 ensembl transcript 1570853 1571830 . - . ID=Thaps21383;Parent=Thaps21383;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1570853 1571830 . - 0 ID=Thaps21383;Parent=Thaps21383;rank=1 chr2 . exon 1570853 1571830 . - . ID=Thaps21383.1;Parent=Thaps21383;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1570009 1570659 . + . ID=Thaps2671;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV14];external_name=Thaps2671;logic_name=jgi_thaps3 chr2 ensembl transcript 1570009 1570659 . + . ID=Thaps2671;Parent=Thaps2671;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1570009 1570659 . + 0 ID=Thaps2671;Parent=Thaps2671;rank=1 chr2 . exon 1570009 1570659 . + . ID=Thaps2671.1;Parent=Thaps2671;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1573664 1575446 . + . ID=Thaps2673;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV16];external_name=Thaps2673;logic_name=jgi_thaps3 chr2 ensembl transcript 1573664 1575446 . + . ID=Thaps2673;Parent=Thaps2673;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1573664 1573906 . + 0 ID=Thaps2673;Parent=Thaps2673;rank=1 chr2 . exon 1573664 1573906 . + . ID=Thaps2673.1;Parent=Thaps2673;constitutive=1;rank=1 chr2 . CDS 1573943 1574288 . + 0 ID=Thaps2673;Parent=Thaps2673;rank=2 chr2 . exon 1573943 1574288 . + . ID=Thaps2673.2;Parent=Thaps2673;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1574365 1574584 . + 0 ID=Thaps2673;Parent=Thaps2673;rank=3 chr2 . exon 1574365 1574584 . + . ID=Thaps2673.3;Parent=Thaps2673;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1574714 1574796 . + 0 ID=Thaps2673;Parent=Thaps2673;rank=4 chr2 . exon 1574714 1574796 . + . ID=Thaps2673.4;Parent=Thaps2673;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1574923 1575446 . + 0 ID=Thaps2673;Parent=Thaps2673;rank=5 chr2 . exon 1574923 1575446 . + . ID=Thaps2673.5;Parent=Thaps2673;constitutive=1;ensembl_end_phase=2;rank=5 chr2 ensembl protein_coding_gene 1575608 1576992 . - . ID=Thaps2674;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV17];external_name=Thaps2674;logic_name=jgi_thaps3 chr2 ensembl transcript 1575608 1576992 . - . ID=Thaps2674;Parent=Thaps2674;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1575608 1575698 . - 0 ID=Thaps2674;Parent=Thaps2674;rank=2 chr2 . exon 1575608 1575698 . - . ID=Thaps2674.2;Parent=Thaps2674;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1575896 1576992 . - 0 ID=Thaps2674;Parent=Thaps2674;rank=1 chr2 . exon 1575896 1576992 . - . ID=Thaps2674.1;Parent=Thaps2674;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1577691 1579466 . - . ID=Thaps273;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV18];external_name=Thaps273;logic_name=jgi_thaps3 chr2 ensembl transcript 1577691 1579466 . - . ID=Thaps273;Parent=Thaps273;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1577691 1579466 . - 0 ID=Thaps273;Parent=Thaps273;rank=1 chr2 . exon 1577691 1579466 . - . ID=Thaps273.1;Parent=Thaps273;constitutive=1;rank=1 chr2 . repeat_region 1580577 1580600 . ? . description=dust chr2 . repeat_region 1588097 1588375 . ? . description=trf chr2 ensembl protein_coding_gene 1581033 1582118 . + . ID=Thaps21386;biotype=protein_coding;description=Expressed protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV19];external_name=Thaps21386;logic_name=jgi_thaps3 chr2 ensembl transcript 1581033 1582118 . + . ID=Thaps21386;Parent=Thaps21386;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1581033 1582118 . + 0 ID=Thaps21386;Parent=Thaps21386;rank=1 chr2 . exon 1581033 1582118 . + . ID=Thaps21386.1;Parent=Thaps21386;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1585434 1587104 . + . ID=Thaps21387;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV22];external_name=Thaps21387;logic_name=jgi_thaps3 chr2 ensembl transcript 1585434 1587104 . + . ID=Thaps21387;Parent=Thaps21387;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1585434 1587104 . + 0 ID=Thaps21387;Parent=Thaps21387;rank=1 chr2 . exon 1585434 1587104 . + . ID=Thaps21387.1;Parent=Thaps21387;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1587242 1587749 . - . ID=Thaps21388;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV23];external_name=Thaps21388;logic_name=jgi_thaps3 chr2 ensembl transcript 1587242 1587749 . - . ID=Thaps21388;Parent=Thaps21388;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1587242 1587270 . - 0 ID=Thaps21388;Parent=Thaps21388;rank=2 chr2 . exon 1587242 1587270 . - . ID=Thaps21388.2;Parent=Thaps21388;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1587317 1587749 . - 0 ID=Thaps21388;Parent=Thaps21388;rank=1 chr2 . exon 1587317 1587749 . - . ID=Thaps21388.1;Parent=Thaps21388;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1582186 1582863 . - . ID=Thaps2678;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV20];external_name=Thaps2678;logic_name=jgi_thaps3 chr2 ensembl transcript 1582186 1582863 . - . ID=Thaps2678;Parent=Thaps2678;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1582186 1582863 . - 0 ID=Thaps2678;Parent=Thaps2678;rank=1 chr2 . exon 1582186 1582863 . - . ID=Thaps2678.1;Parent=Thaps2678;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1583287 1584564 . + . ID=Thaps2679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV21];external_name=Thaps2679;logic_name=jgi_thaps3 chr2 ensembl transcript 1583287 1584564 . + . ID=Thaps2679;Parent=Thaps2679;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1583287 1583302 . + 0 ID=Thaps2679;Parent=Thaps2679;rank=1 chr2 . exon 1583287 1583302 . + . ID=Thaps2679.1;Parent=Thaps2679;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1583396 1584564 . + 0 ID=Thaps2679;Parent=Thaps2679;rank=2 chr2 . exon 1583396 1584564 . + . ID=Thaps2679.2;Parent=Thaps2679;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . biological_region 1596412 1596414 0.999 - . logic_name=eponine chr2 ensembl protein_coding_gene 1588588 1589793 . - . ID=Thaps21389;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV24];external_name=Thaps21389;logic_name=jgi_thaps3 chr2 ensembl transcript 1588588 1589793 . - . ID=Thaps21389;Parent=Thaps21389;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1588588 1589793 . - 0 ID=Thaps21389;Parent=Thaps21389;rank=1 chr2 . exon 1588588 1589793 . - . ID=Thaps21389.1;Parent=Thaps21389;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1590047 1590607 . + . ID=Thaps21390;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV25];external_name=Thaps21390;logic_name=jgi_thaps3 chr2 ensembl transcript 1590047 1590607 . + . ID=Thaps21390;Parent=Thaps21390;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1590047 1590607 . + 0 ID=Thaps21390;Parent=Thaps21390;rank=1 chr2 . exon 1590047 1590607 . + . ID=Thaps21390.1;Parent=Thaps21390;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1597133 1599055 . + . ID=Thaps21392;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV28];external_name=Thaps21392;logic_name=jgi_thaps3 chr2 ensembl transcript 1597133 1599055 . + . ID=Thaps21392;Parent=Thaps21392;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1597133 1597476 . + 0 ID=Thaps21392;Parent=Thaps21392;rank=1 chr2 . exon 1597133 1597476 . + . ID=Thaps21392.1;Parent=Thaps21392;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1597656 1597942 . + 0 ID=Thaps21392;Parent=Thaps21392;rank=2 chr2 . exon 1597656 1597942 . + . ID=Thaps21392.2;Parent=Thaps21392;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1598078 1598205 . + 0 ID=Thaps21392;Parent=Thaps21392;rank=3 chr2 . exon 1598078 1598205 . + . ID=Thaps21392.3;Parent=Thaps21392;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1598560 1598694 . + 0 ID=Thaps21392;Parent=Thaps21392;rank=4 chr2 . CDS 1598786 1599055 . + 0 ID=Thaps21392;Parent=Thaps21392;rank=5 chr2 ensembl protein_coding_gene 1594172 1595262 . - . ID=Thaps261472;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV27];external_name=Thaps261472;logic_name=jgi_thaps3 chr2 ensembl transcript 1594172 1595262 . - . ID=Thaps261472;Parent=Thaps261472;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1594172 1594651 . - 0 ID=Thaps261472;Parent=Thaps261472;rank=2 chr2 . exon 1594172 1594651 . - . ID=Thaps261472.2;Parent=Thaps261472;constitutive=1;rank=2 chr2 . CDS 1594988 1595262 . - 0 ID=Thaps261472;Parent=Thaps261472;rank=1 chr2 . exon 1594988 1595262 . - . ID=Thaps261472.1;Parent=Thaps261472;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1591632 1592846 . + . ID=Thaps2684;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV26];external_name=Thaps2684;logic_name=jgi_thaps3 chr2 ensembl transcript 1591632 1592846 . + . ID=Thaps2684;Parent=Thaps2684;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1591632 1592281 . + 0 ID=Thaps2684;Parent=Thaps2684;rank=1 chr2 . exon 1591632 1592281 . + . ID=Thaps2684.1;Parent=Thaps2684;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1592441 1592846 . + 0 ID=Thaps2684;Parent=Thaps2684;rank=2 chr2 . exon 1592441 1592846 . + . ID=Thaps2684.2;Parent=Thaps2684;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1607691 1611673 . + . ID=Thaps14563;biotype=protein_coding;description=6-phosphofructo 2-kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BV32];external_name=PF2K1;logic_name=jgi_thaps3 chr2 ensembl transcript 1607691 1611673 . + . ID=Thaps14563;Parent=Thaps14563;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1607691 1607729 . + 0 ID=Thaps14563;Parent=Thaps14563;rank=1 chr2 . exon 1607691 1607729 . + . ID=Thaps14563.1;Parent=Thaps14563;constitutive=1;rank=1 chr2 . CDS 1610120 1610497 . + 0 ID=Thaps14563;Parent=Thaps14563;rank=2 chr2 . CDS 1610577 1610786 . + 0 ID=Thaps14563;Parent=Thaps14563;rank=3 chr2 . CDS 1610855 1611016 . + 0 ID=Thaps14563;Parent=Thaps14563;rank=4 chr2 . CDS 1611059 1611156 . + 0 ID=Thaps14563;Parent=Thaps14563;rank=5 chr2 . CDS 1611278 1611399 . + 0 ID=Thaps14563;Parent=Thaps14563;rank=6 chr2 . CDS 1611471 1611673 . + 0 ID=Thaps14563;Parent=Thaps14563;rank=7 chr2 . exon 1598560 1598694 . + . ID=Thaps21392.4;Parent=Thaps21392;constitutive=1;rank=4 chr2 . exon 1598786 1599055 . + . ID=Thaps21392.5;Parent=Thaps21392;constitutive=1;rank=5 chr2 ensembl protein_coding_gene 1599219 1600241 . - . ID=Thaps21393;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV29];external_name=Thaps21393;logic_name=jgi_thaps3 chr2 ensembl transcript 1599219 1600241 . - . ID=Thaps21393;Parent=Thaps21393;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1599219 1600241 . - 0 ID=Thaps21393;Parent=Thaps21393;rank=1 chr2 . exon 1599219 1600241 . - . ID=Thaps21393.1;Parent=Thaps21393;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1605323 1607117 . - . ID=Thaps2690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV31];external_name=Thaps2690;logic_name=jgi_thaps3 chr2 ensembl transcript 1605323 1607117 . - . ID=Thaps2690;Parent=Thaps2690;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1605323 1605576 . - 0 ID=Thaps2690;Parent=Thaps2690;rank=3 chr2 . exon 1605323 1605576 . - . ID=Thaps2690.3;Parent=Thaps2690;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1605653 1606508 . - 0 ID=Thaps2690;Parent=Thaps2690;rank=2 chr2 . exon 1605653 1606508 . - . ID=Thaps2690.2;Parent=Thaps2690;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1606599 1607117 . - 0 ID=Thaps2690;Parent=Thaps2690;rank=1 chr2 . exon 1606599 1607117 . - . ID=Thaps2690.1;Parent=Thaps2690;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1603598 1605217 . + . ID=Thaps32053;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV30];external_name=Thaps32053;logic_name=jgi_thaps3 chr2 ensembl transcript 1603598 1605217 . + . ID=Thaps32053;Parent=Thaps32053;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1603598 1604049 . + 0 ID=Thaps32053;Parent=Thaps32053;rank=1 chr2 . exon 1603598 1604049 . + . ID=Thaps32053.1;Parent=Thaps32053;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1604116 1605217 . + 0 ID=Thaps32053;Parent=Thaps32053;rank=2 chr2 . exon 1604116 1605217 . + . ID=Thaps32053.2;Parent=Thaps32053;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . repeat_region 1615233 1615241 . ? . description=dust chr2 . repeat_region 1617031 1617056 . ? . description=trf chr2 . repeat_region 1617031 1617056 . ? . description=dust chr2 . repeat_region 1617581 1617603 . ? . description=trf chr2 . exon 1610120 1610497 . + . ID=Thaps14563.2;Parent=Thaps14563;constitutive=1;rank=2 chr2 . exon 1610577 1610786 . + . ID=Thaps14563.3;Parent=Thaps14563;constitutive=1;rank=3 chr2 . exon 1610855 1611016 . + . ID=Thaps14563.4;Parent=Thaps14563;constitutive=1;rank=4 chr2 . exon 1611059 1611156 . + . ID=Thaps14563.5;Parent=Thaps14563;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . exon 1611278 1611399 . + . ID=Thaps14563.6;Parent=Thaps14563;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . exon 1611471 1611673 . + . ID=Thaps14563.7;Parent=Thaps14563;constitutive=1;ensembl_end_phase=2;rank=7 chr2 ensembl protein_coding_gene 1615510 1617783 . - . ID=Thaps21397;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV35];external_name=Thaps21397;logic_name=jgi_thaps3 chr2 ensembl transcript 1615510 1617783 . - . ID=Thaps21397;Parent=Thaps21397;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1615510 1616706 . - 0 ID=Thaps21397;Parent=Thaps21397;rank=3 chr2 . exon 1615510 1616706 . - . ID=Thaps21397.3;Parent=Thaps21397;constitutive=1;rank=3 chr2 . CDS 1616751 1617230 . - 0 ID=Thaps21397;Parent=Thaps21397;rank=2 chr2 . exon 1616751 1617230 . - . ID=Thaps21397.2;Parent=Thaps21397;constitutive=1;rank=2 chr2 . CDS 1617349 1617783 . - 0 ID=Thaps21397;Parent=Thaps21397;rank=1 chr2 . exon 1617349 1617783 . - . ID=Thaps21397.1;Parent=Thaps21397;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1618003 1620351 . + . ID=Thaps21398;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV36];external_name=Thaps21398;logic_name=jgi_thaps3 chr2 ensembl transcript 1618003 1620351 . + . ID=Thaps21398;Parent=Thaps21398;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1618003 1620351 . + 0 ID=Thaps21398;Parent=Thaps21398;rank=1 chr2 . exon 1618003 1620351 . + . ID=Thaps21398.1;Parent=Thaps21398;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1611957 1612403 . - . ID=Thaps261476;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV33];external_name=Thaps261476;logic_name=jgi_thaps3 chr2 ensembl transcript 1611957 1612403 . - . ID=Thaps261476;Parent=Thaps261476;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1611957 1612196 . - 0 ID=Thaps261476;Parent=Thaps261476;rank=2 chr2 . exon 1611957 1612196 . - . ID=Thaps261476.2;Parent=Thaps261476;constitutive=1;rank=2 chr2 . CDS 1612230 1612403 . - 0 ID=Thaps261476;Parent=Thaps261476;rank=1 chr2 . exon 1612230 1612403 . - . ID=Thaps261476.1;Parent=Thaps261476;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1612746 1615142 . - . ID=Thaps2693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV34];external_name=Thaps2693;logic_name=jgi_thaps3 chr2 ensembl transcript 1612746 1615142 . - . ID=Thaps2693;Parent=Thaps2693;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1612746 1615142 . - 0 ID=Thaps2693;Parent=Thaps2693;rank=1 chr2 . exon 1612746 1615142 . - . ID=Thaps2693.1;Parent=Thaps2693;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1625921 1628456 . + . ID=Thaps21400;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV39];external_name=Thaps21400;logic_name=jgi_thaps3 chr2 ensembl transcript 1625921 1628456 . + . ID=Thaps21400;Parent=Thaps21400;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1625921 1628093 . + 0 ID=Thaps21400;Parent=Thaps21400;rank=1 chr2 . exon 1625921 1628093 . + . ID=Thaps21400.1;Parent=Thaps21400;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1628179 1628456 . + 0 ID=Thaps21400;Parent=Thaps21400;rank=2 chr2 . exon 1628179 1628456 . + . ID=Thaps21400.2;Parent=Thaps21400;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1623639 1625180 . + . ID=Thaps2698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV38];external_name=Thaps2698;logic_name=jgi_thaps3 chr2 ensembl transcript 1623639 1625180 . + . ID=Thaps2698;Parent=Thaps2698;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1623639 1623659 . + 0 ID=Thaps2698;Parent=Thaps2698;rank=1 chr2 . exon 1623639 1623659 . + . ID=Thaps2698.1;Parent=Thaps2698;constitutive=1;rank=1 chr2 . CDS 1623792 1625180 . + 0 ID=Thaps2698;Parent=Thaps2698;rank=2 chr2 . exon 1623792 1625180 . + . ID=Thaps2698.2;Parent=Thaps2698;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1622326 1622925 . + . ID=Thaps32295;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV37];external_name=Thaps32295;logic_name=jgi_thaps3 chr2 ensembl transcript 1622326 1622925 . + . ID=Thaps32295;Parent=Thaps32295;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1622326 1622505 . + 0 ID=Thaps32295;Parent=Thaps32295;rank=1 chr2 . exon 1622326 1622505 . + . ID=Thaps32295.1;Parent=Thaps32295;constitutive=1;rank=1 chr2 . CDS 1622596 1622925 . + 0 ID=Thaps32295;Parent=Thaps32295;rank=2 chr2 . exon 1622596 1622925 . + . ID=Thaps32295.2;Parent=Thaps32295;constitutive=1;rank=2 chr2 . repeat_region 1630018 1630080 . ? . description=dust chr2 ensembl protein_coding_gene 1633751 1635519 . + . ID=Thaps21403;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV43];external_name=Thaps21403;logic_name=jgi_thaps3 chr2 ensembl transcript 1633751 1635519 . + . ID=Thaps21403;Parent=Thaps21403;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1633751 1633905 . + 0 ID=Thaps21403;Parent=Thaps21403;rank=1 chr2 . exon 1633751 1633905 . + . ID=Thaps21403.1;Parent=Thaps21403;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1634187 1635391 . + 0 ID=Thaps21403;Parent=Thaps21403;rank=2 chr2 . exon 1634187 1635391 . + . ID=Thaps21403.2;Parent=Thaps21403;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1635476 1635519 . + 0 ID=Thaps21403;Parent=Thaps21403;rank=3 chr2 . exon 1635476 1635519 . + . ID=Thaps21403.3;Parent=Thaps21403;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 1630674 1631642 . + . ID=Thaps2702;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV41];external_name=Thaps2702;logic_name=jgi_thaps3 chr2 ensembl transcript 1630674 1631642 . + . ID=Thaps2702;Parent=Thaps2702;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1630674 1631642 . + 0 ID=Thaps2702;Parent=Thaps2702;rank=1 chr2 . exon 1630674 1631642 . + . ID=Thaps2702.1;Parent=Thaps2702;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1631704 1633440 . - . ID=Thaps2703;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV42];external_name=Thaps2703;logic_name=jgi_thaps3 chr2 ensembl transcript 1631704 1633440 . - . ID=Thaps2703;Parent=Thaps2703;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1631704 1633440 . - 0 ID=Thaps2703;Parent=Thaps2703;rank=1 chr2 . exon 1631704 1633440 . - . ID=Thaps2703.1;Parent=Thaps2703;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1635650 1638253 . - . ID=Thaps2705;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV44];external_name=Thaps2705;logic_name=jgi_thaps3 chr2 ensembl transcript 1635650 1638253 . - . ID=Thaps2705;Parent=Thaps2705;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1635650 1635738 . - 0 ID=Thaps2705;Parent=Thaps2705;rank=7 chr2 . exon 1635650 1635738 . - . ID=Thaps2705.7;Parent=Thaps2705;constitutive=1;ensembl_end_phase=2;rank=7 chr2 . CDS 1635822 1636110 . - 0 ID=Thaps2705;Parent=Thaps2705;rank=6 chr2 . exon 1635822 1636110 . - . ID=Thaps2705.6;Parent=Thaps2705;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 1636172 1636285 . - 0 ID=Thaps2705;Parent=Thaps2705;rank=5 chr2 . exon 1636172 1636285 . - . ID=Thaps2705.5;Parent=Thaps2705;constitutive=1;rank=5 chr2 . CDS 1636432 1636491 . - 0 ID=Thaps2705;Parent=Thaps2705;rank=4 chr2 . exon 1636432 1636491 . - . ID=Thaps2705.4;Parent=Thaps2705;constitutive=1;rank=4 chr2 . CDS 1636569 1637159 . - 0 ID=Thaps2705;Parent=Thaps2705;rank=3 chr2 . exon 1636569 1637159 . - . ID=Thaps2705.3;Parent=Thaps2705;constitutive=1;rank=3 chr2 . CDS 1637234 1637779 . - 0 ID=Thaps2705;Parent=Thaps2705;rank=2 chr2 . exon 1637234 1637779 . - . ID=Thaps2705.2;Parent=Thaps2705;constitutive=1;rank=2 chr2 . CDS 1637891 1638253 . - 0 ID=Thaps2705;Parent=Thaps2705;rank=1 chr2 . exon 1637891 1638253 . - . ID=Thaps2705.1;Parent=Thaps2705;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1628661 1629899 . - . ID=Thaps39606;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV40];external_name=Thaps39606;logic_name=jgi_thaps3 chr2 ensembl transcript 1628661 1629899 . - . ID=Thaps39606;Parent=Thaps39606;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1628661 1628828 . - 0 ID=Thaps39606;Parent=Thaps39606;rank=2 chr2 . exon 1628661 1628828 . - . ID=Thaps39606.2;Parent=Thaps39606;constitutive=1;rank=2 chr2 . CDS 1628871 1629899 . - 0 ID=Thaps39606;Parent=Thaps39606;rank=1 chr2 . exon 1628871 1629899 . - . ID=Thaps39606.1;Parent=Thaps39606;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1642502 1644616 . + . ID=Thaps21405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV46];external_name=Thaps21405;logic_name=jgi_thaps3 chr2 ensembl transcript 1642502 1644616 . + . ID=Thaps21405;Parent=Thaps21405;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1642502 1643154 . + 0 ID=Thaps21405;Parent=Thaps21405;rank=1 chr2 . exon 1642502 1643154 . + . ID=Thaps21405.1;Parent=Thaps21405;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1643187 1644237 . + 0 ID=Thaps21405;Parent=Thaps21405;rank=2 chr2 . exon 1643187 1644237 . + . ID=Thaps21405.2;Parent=Thaps21405;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1644365 1644616 . + 0 ID=Thaps21405;Parent=Thaps21405;rank=3 chr2 . exon 1644365 1644616 . + . ID=Thaps21405.3;Parent=Thaps21405;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1647682 1648616 . + . ID=Thaps261479;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV48];external_name=Thaps261479;logic_name=jgi_thaps3 chr2 ensembl transcript 1647682 1648616 . + . ID=Thaps261479;Parent=Thaps261479;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1647682 1647779 . + 0 ID=Thaps261479;Parent=Thaps261479;rank=1 chr2 . exon 1647682 1647779 . + . ID=Thaps261479.1;Parent=Thaps261479;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1647965 1648112 . + 0 ID=Thaps261479;Parent=Thaps261479;rank=2 chr2 . exon 1647965 1648112 . + . ID=Thaps261479.2;Parent=Thaps261479;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1648215 1648364 . + 0 ID=Thaps261479;Parent=Thaps261479;rank=3 chr2 . exon 1648215 1648364 . + . ID=Thaps261479.3;Parent=Thaps261479;constitutive=1;rank=3 chr2 . CDS 1648467 1648616 . + 0 ID=Thaps261479;Parent=Thaps261479;rank=4 chr2 ensembl protein_coding_gene 1645991 1646716 . - . ID=Thaps27167;biotype=protein_coding;description=RL7%2C ribosomal protein 7 [Source:UniProtKB/TrEMBL%3BAcc:B8BV47];external_name=RL7;logic_name=jgi_thaps3 chr2 ensembl transcript 1645991 1646716 . - . ID=Thaps27167;Parent=Thaps27167;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1645991 1646716 . - 0 ID=Thaps27167;Parent=Thaps27167;rank=1 chr2 . exon 1645991 1646716 . - . ID=Thaps27167.1;Parent=Thaps27167;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1639674 1640410 . - . ID=Thaps31885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV45];external_name=Thaps31885;logic_name=jgi_thaps3 chr2 ensembl transcript 1639674 1640410 . - . ID=Thaps31885;Parent=Thaps31885;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1639674 1640162 . - 0 ID=Thaps31885;Parent=Thaps31885;rank=2 chr2 . exon 1639674 1640162 . - . ID=Thaps31885.2;Parent=Thaps31885;constitutive=1;rank=2 chr2 . CDS 1640267 1640410 . - 0 ID=Thaps31885;Parent=Thaps31885;rank=1 chr2 . exon 1640267 1640410 . - . ID=Thaps31885.1;Parent=Thaps31885;constitutive=1;rank=1 chr2 . repeat_region 1649791 1649830 . ? . description=trf chr2 ensembl protein_coding_gene 1657205 1658711 . - . ID=Thaps21409;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV51];external_name=Thaps21409;logic_name=jgi_thaps3 chr2 ensembl transcript 1657205 1658711 . - . ID=Thaps21409;Parent=Thaps21409;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1657205 1657217 . - 0 ID=Thaps21409;Parent=Thaps21409;rank=2 chr2 . exon 1657205 1657217 . - . ID=Thaps21409.2;Parent=Thaps21409;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1657339 1658711 . - 0 ID=Thaps21409;Parent=Thaps21409;rank=1 chr2 . exon 1657339 1658711 . - . ID=Thaps21409.1;Parent=Thaps21409;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . exon 1648467 1648616 . + . ID=Thaps261479.4;Parent=Thaps261479;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 1654410 1655723 . - . ID=Thaps2711;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV50];external_name=Thaps2711;logic_name=jgi_thaps3 chr2 ensembl transcript 1654410 1655723 . - . ID=Thaps2711;Parent=Thaps2711;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1654410 1655255 . - 0 ID=Thaps2711;Parent=Thaps2711;rank=2 chr2 . exon 1654410 1655255 . - . ID=Thaps2711.2;Parent=Thaps2711;constitutive=1;rank=2 chr2 . CDS 1655550 1655723 . - 0 ID=Thaps2711;Parent=Thaps2711;rank=1 chr2 . exon 1655550 1655723 . - . ID=Thaps2711.1;Parent=Thaps2711;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1651731 1654215 . + . ID=Thaps277;biotype=protein_coding;description=Cycloartenol synthase%3B-2%2C3-epoxysqualene mutase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV49];external_name=CAS1;logic_name=jgi_thaps3 chr2 ensembl transcript 1651731 1654215 . + . ID=Thaps277;Parent=Thaps277;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1651731 1652139 . + 0 ID=Thaps277;Parent=Thaps277;rank=1 chr2 . exon 1651731 1652139 . + . ID=Thaps277.1;Parent=Thaps277;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1652213 1652388 . + 0 ID=Thaps277;Parent=Thaps277;rank=2 chr2 . exon 1652213 1652388 . + . ID=Thaps277.2;Parent=Thaps277;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1652468 1652744 . + 0 ID=Thaps277;Parent=Thaps277;rank=3 chr2 . exon 1652468 1652744 . + . ID=Thaps277.3;Parent=Thaps277;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1652849 1653009 . + 0 ID=Thaps277;Parent=Thaps277;rank=4 chr2 . exon 1652849 1653009 . + . ID=Thaps277.4;Parent=Thaps277;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1653106 1653155 . + 0 ID=Thaps277;Parent=Thaps277;rank=5 chr2 . exon 1653106 1653155 . + . ID=Thaps277.5;Parent=Thaps277;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1653231 1654215 . + 0 ID=Thaps277;Parent=Thaps277;rank=6 chr2 . exon 1653231 1654215 . + . ID=Thaps277.6;Parent=Thaps277;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . repeat_region 1658746 1658770 . ? . description=dust chr2 . repeat_region 1664612 1664641 . ? . description=dust chr2 ensembl protein_coding_gene 1660246 1664337 . - . ID=Thaps21410;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV52];external_name=Thaps21410;logic_name=jgi_thaps3 chr2 ensembl transcript 1660246 1664337 . - . ID=Thaps21410;Parent=Thaps21410;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1660246 1662367 . - 0 ID=Thaps21410;Parent=Thaps21410;rank=3 chr2 . exon 1660246 1662367 . - . ID=Thaps21410.3;Parent=Thaps21410;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1662449 1664193 . - 0 ID=Thaps21410;Parent=Thaps21410;rank=2 chr2 . exon 1662449 1664193 . - . ID=Thaps21410.2;Parent=Thaps21410;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1664293 1664337 . - 0 ID=Thaps21410;Parent=Thaps21410;rank=1 chr2 . exon 1664293 1664337 . - . ID=Thaps21410.1;Parent=Thaps21410;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1668183 1670165 . - . ID=Thaps261481;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV54];external_name=Thaps261481;logic_name=jgi_thaps3 chr2 ensembl transcript 1668183 1670165 . - . ID=Thaps261481;Parent=Thaps261481;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1668183 1668732 . - 0 ID=Thaps261481;Parent=Thaps261481;rank=3 chr2 . exon 1668183 1668732 . - . ID=Thaps261481.3;Parent=Thaps261481;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1668800 1669605 . - 0 ID=Thaps261481;Parent=Thaps261481;rank=2 chr2 . CDS 1669682 1670165 . - 0 ID=Thaps261481;Parent=Thaps261481;rank=1 chr2 ensembl protein_coding_gene 1664818 1668162 . + . ID=Thaps2714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV53];external_name=Thaps2714;logic_name=jgi_thaps3 chr2 ensembl transcript 1664818 1668162 . + . ID=Thaps2714;Parent=Thaps2714;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1664818 1665880 . + 0 ID=Thaps2714;Parent=Thaps2714;rank=1 chr2 . exon 1664818 1665880 . + . ID=Thaps2714.1;Parent=Thaps2714;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1665956 1666183 . + 0 ID=Thaps2714;Parent=Thaps2714;rank=2 chr2 . exon 1665956 1666183 . + . ID=Thaps2714.2;Parent=Thaps2714;constitutive=1;rank=2 chr2 . CDS 1666248 1666380 . + 0 ID=Thaps2714;Parent=Thaps2714;rank=3 chr2 . exon 1666248 1666380 . + . ID=Thaps2714.3;Parent=Thaps2714;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1666461 1668162 . + 0 ID=Thaps2714;Parent=Thaps2714;rank=4 chr2 . exon 1666461 1668162 . + . ID=Thaps2714.4;Parent=Thaps2714;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . repeat_region 1671007 1671045 . ? . description=trf chr2 ensembl protein_coding_gene 1670596 1673394 . - . ID=Thaps21411;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV55];external_name=Thaps21411;logic_name=jgi_thaps3 chr2 ensembl transcript 1670596 1673394 . - . ID=Thaps21411;Parent=Thaps21411;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1670596 1673394 . - 0 ID=Thaps21411;Parent=Thaps21411;rank=1 chr2 . exon 1670596 1673394 . - . ID=Thaps21411.1;Parent=Thaps21411;constitutive=1;rank=1 chr2 . exon 1668800 1669605 . - . ID=Thaps261481.2;Parent=Thaps261481;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . exon 1669682 1670165 . - . ID=Thaps261481.1;Parent=Thaps261481;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1677158 1678659 . + . ID=Thaps268324;biotype=protein_coding;description=Chloroplast membrane protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV58];external_name=Thaps268324;logic_name=jgi_thaps3 chr2 ensembl transcript 1677158 1678659 . + . ID=Thaps268324;Parent=Thaps268324;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1677158 1677455 . + 0 ID=Thaps268324;Parent=Thaps268324;rank=1 chr2 . exon 1677158 1677455 . + . ID=Thaps268324.1;Parent=Thaps268324;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1677640 1678410 . + 0 ID=Thaps268324;Parent=Thaps268324;rank=2 chr2 . exon 1677640 1678410 . + . ID=Thaps268324.2;Parent=Thaps268324;constitutive=1;rank=2 chr2 . CDS 1678505 1678659 . + 0 ID=Thaps268324;Parent=Thaps268324;rank=3 chr2 ensembl protein_coding_gene 1673838 1674158 . + . ID=Thaps2717;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV56];external_name=Thaps2717;logic_name=jgi_thaps3 chr2 ensembl transcript 1673838 1674158 . + . ID=Thaps2717;Parent=Thaps2717;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1673838 1674158 . + 0 ID=Thaps2717;Parent=Thaps2717;rank=1 chr2 . exon 1673838 1674158 . + . ID=Thaps2717.1;Parent=Thaps2717;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1674879 1675577 . - . ID=Thaps31862;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV57];external_name=Thaps31862;logic_name=jgi_thaps3 chr2 ensembl transcript 1674879 1675577 . - . ID=Thaps31862;Parent=Thaps31862;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1674879 1675173 . - 0 ID=Thaps31862;Parent=Thaps31862;rank=2 chr2 . exon 1674879 1675173 . - . ID=Thaps31862.2;Parent=Thaps31862;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1675288 1675577 . - 0 ID=Thaps31862;Parent=Thaps31862;rank=1 chr2 . exon 1675288 1675577 . - . ID=Thaps31862.1;Parent=Thaps31862;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . biological_region 1686079 1686080 0.999 + . logic_name=eponine chr2 . repeat_region 1686285 1686339 . - . description=Copia9LTR_TP chr2 ensembl protein_coding_gene 1681225 1684005 . - . ID=Thaps21414;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV60];external_name=Thaps21414;logic_name=jgi_thaps3 chr2 ensembl transcript 1681225 1684005 . - . ID=Thaps21414;Parent=Thaps21414;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1681225 1684005 . - 0 ID=Thaps21414;Parent=Thaps21414;rank=1 chr2 . exon 1681225 1684005 . - . ID=Thaps21414.1;Parent=Thaps21414;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1684445 1686247 . - . ID=Thaps21415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV61];external_name=Thaps21415;logic_name=jgi_thaps3 chr2 ensembl transcript 1684445 1686247 . - . ID=Thaps21415;Parent=Thaps21415;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1684445 1686247 . - 0 ID=Thaps21415;Parent=Thaps21415;rank=1 chr2 . exon 1684445 1686247 . - . ID=Thaps21415.1;Parent=Thaps21415;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1687575 1688324 . + . ID=Thaps21416;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV62];external_name=Thaps21416;logic_name=jgi_thaps3 chr2 ensembl transcript 1687575 1688324 . + . ID=Thaps21416;Parent=Thaps21416;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1687575 1688324 . + 0 ID=Thaps21416;Parent=Thaps21416;rank=1 chr2 . exon 1687575 1688324 . + . ID=Thaps21416.1;Parent=Thaps21416;constitutive=1;rank=1 chr2 . exon 1678505 1678659 . + . ID=Thaps268324.3;Parent=Thaps268324;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 1679044 1681002 . + . ID=Thaps2720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV59];external_name=Thaps2720;logic_name=jgi_thaps3 chr2 ensembl transcript 1679044 1681002 . + . ID=Thaps2720;Parent=Thaps2720;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1679044 1679597 . + 0 ID=Thaps2720;Parent=Thaps2720;rank=1 chr2 . exon 1679044 1679597 . + . ID=Thaps2720.1;Parent=Thaps2720;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1679668 1680442 . + 0 ID=Thaps2720;Parent=Thaps2720;rank=2 chr2 . exon 1679668 1680442 . + . ID=Thaps2720.2;Parent=Thaps2720;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1680514 1681002 . + 0 ID=Thaps2720;Parent=Thaps2720;rank=3 chr2 . exon 1680514 1681002 . + . ID=Thaps2720.3;Parent=Thaps2720;constitutive=1;rank=3 chr2 . repeat_region 1689217 1689257 . ? . description=dust chr2 . repeat_region 1689237 1689257 . ? . description=trf chr2 . repeat_region 1694935 1694943 . ? . description=dust chr2 ensembl protein_coding_gene 1696439 1697830 . + . ID=Thaps14030;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV66];external_name=Thaps14030;logic_name=jgi_thaps3 chr2 ensembl transcript 1696439 1697830 . + . ID=Thaps14030;Parent=Thaps14030;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1696439 1696895 . + 0 ID=Thaps14030;Parent=Thaps14030;rank=1 chr2 . exon 1696439 1696895 . + . ID=Thaps14030.1;Parent=Thaps14030;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1696977 1697830 . + 0 ID=Thaps14030;Parent=Thaps14030;rank=2 chr2 . exon 1696977 1697830 . + . ID=Thaps14030.2;Parent=Thaps14030;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1692629 1693961 . + . ID=Thaps2725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV64];external_name=Thaps2725;logic_name=jgi_thaps3 chr2 ensembl transcript 1692629 1693961 . + . ID=Thaps2725;Parent=Thaps2725;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1692629 1692836 . + 0 ID=Thaps2725;Parent=Thaps2725;rank=1 chr2 . exon 1692629 1692836 . + . ID=Thaps2725.1;Parent=Thaps2725;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1692925 1693961 . + 0 ID=Thaps2725;Parent=Thaps2725;rank=2 chr2 . exon 1692925 1693961 . + . ID=Thaps2725.2;Parent=Thaps2725;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1694180 1694839 . - . ID=Thaps32003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV65];external_name=Thaps32003;logic_name=jgi_thaps3 chr2 ensembl transcript 1694180 1694839 . - . ID=Thaps32003;Parent=Thaps32003;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1694180 1694839 . - 0 ID=Thaps32003;Parent=Thaps32003;rank=1 chr2 . exon 1694180 1694839 . - . ID=Thaps32003.1;Parent=Thaps32003;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1689606 1691288 . + . ID=Thaps39615;biotype=protein_coding;description=Coatomer protein subunit delta [Source:UniProtKB/TrEMBL%3BAcc:B8BV63];external_name=COP5;logic_name=jgi_thaps3 chr2 ensembl transcript 1689606 1691288 . + . ID=Thaps39615;Parent=Thaps39615;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1689606 1690152 . + 0 ID=Thaps39615;Parent=Thaps39615;rank=1 chr2 . exon 1689606 1690152 . + . ID=Thaps39615.1;Parent=Thaps39615;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1690291 1691288 . + 0 ID=Thaps39615;Parent=Thaps39615;rank=2 chr2 . exon 1690291 1691288 . + . ID=Thaps39615.2;Parent=Thaps39615;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1705087 1706868 . - . ID=Thaps21419;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV68];external_name=Thaps21419;logic_name=jgi_thaps3 chr2 ensembl transcript 1705087 1706868 . - . ID=Thaps21419;Parent=Thaps21419;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1705087 1705251 . - 0 ID=Thaps21419;Parent=Thaps21419;rank=3 chr2 . exon 1705087 1705251 . - . ID=Thaps21419.3;Parent=Thaps21419;constitutive=1;rank=3 chr2 . CDS 1705329 1705577 . - 0 ID=Thaps21419;Parent=Thaps21419;rank=2 chr2 . exon 1705329 1705577 . - . ID=Thaps21419.2;Parent=Thaps21419;constitutive=1;rank=2 chr2 . CDS 1705654 1706868 . - 0 ID=Thaps21419;Parent=Thaps21419;rank=1 chr2 . exon 1705654 1706868 . - . ID=Thaps21419.1;Parent=Thaps21419;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1707135 1710143 . + . ID=Thaps21420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV69];external_name=Thaps21420;logic_name=jgi_thaps3 chr2 ensembl transcript 1707135 1710143 . + . ID=Thaps21420;Parent=Thaps21420;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1707135 1709405 . + 0 ID=Thaps21420;Parent=Thaps21420;rank=1 chr2 . exon 1707135 1709405 . + . ID=Thaps21420.1;Parent=Thaps21420;constitutive=1;rank=1 chr2 . CDS 1709487 1710143 . + 0 ID=Thaps21420;Parent=Thaps21420;rank=2 chr2 ensembl protein_coding_gene 1699559 1702655 . - . ID=Thaps2728;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV67];external_name=Thaps2728;logic_name=jgi_thaps3 chr2 ensembl transcript 1699559 1702655 . - . ID=Thaps2728;Parent=Thaps2728;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1699559 1701403 . - 0 ID=Thaps2728;Parent=Thaps2728;rank=3 chr2 . exon 1699559 1701403 . - . ID=Thaps2728.3;Parent=Thaps2728;constitutive=1;rank=3 chr2 . CDS 1701501 1701941 . - 0 ID=Thaps2728;Parent=Thaps2728;rank=2 chr2 . exon 1701501 1701941 . - . ID=Thaps2728.2;Parent=Thaps2728;constitutive=1;rank=2 chr2 . CDS 1702029 1702655 . - 0 ID=Thaps2728;Parent=Thaps2728;rank=1 chr2 . exon 1702029 1702655 . - . ID=Thaps2728.1;Parent=Thaps2728;constitutive=1;rank=1 chr2 . exon 1709487 1710143 . + . ID=Thaps21420.2;Parent=Thaps21420;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1710338 1710733 . - . ID=Thaps2731;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV70];external_name=Thaps2731;logic_name=jgi_thaps3 chr2 ensembl transcript 1710338 1710733 . - . ID=Thaps2731;Parent=Thaps2731;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1710338 1710733 . - 0 ID=Thaps2731;Parent=Thaps2731;rank=1 chr2 . exon 1710338 1710733 . - . ID=Thaps2731.1;Parent=Thaps2731;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1711256 1711804 . + . ID=Thaps2732;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BV71];external_name=Thaps2732;logic_name=jgi_thaps3 chr2 ensembl transcript 1711256 1711804 . + . ID=Thaps2732;Parent=Thaps2732;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1711256 1711804 . + 0 ID=Thaps2732;Parent=Thaps2732;rank=1 chr2 . exon 1711256 1711804 . + . ID=Thaps2732.1;Parent=Thaps2732;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1712016 1712882 . - . ID=Thaps2733;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV72];external_name=Thaps2733;logic_name=jgi_thaps3 chr2 ensembl transcript 1712016 1712882 . - . ID=Thaps2733;Parent=Thaps2733;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1712016 1712882 . - 0 ID=Thaps2733;Parent=Thaps2733;rank=1 chr2 . exon 1712016 1712882 . - . ID=Thaps2733.1;Parent=Thaps2733;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1713434 1716638 . + . ID=Thaps2734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV73];external_name=Thaps2734;logic_name=jgi_thaps3 chr2 ensembl transcript 1713434 1716638 . + . ID=Thaps2734;Parent=Thaps2734;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1713434 1713866 . + 0 ID=Thaps2734;Parent=Thaps2734;rank=1 chr2 . exon 1713434 1713866 . + . ID=Thaps2734.1;Parent=Thaps2734;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1713950 1714242 . + 0 ID=Thaps2734;Parent=Thaps2734;rank=2 chr2 . exon 1713950 1714242 . + . ID=Thaps2734.2;Parent=Thaps2734;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1714425 1714842 . + 0 ID=Thaps2734;Parent=Thaps2734;rank=3 chr2 . exon 1714425 1714842 . + . ID=Thaps2734.3;Parent=Thaps2734;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1715236 1715346 . + 0 ID=Thaps2734;Parent=Thaps2734;rank=4 chr2 . exon 1715236 1715346 . + . ID=Thaps2734.4;Parent=Thaps2734;constitutive=1;rank=4 chr2 . CDS 1715431 1715702 . + 0 ID=Thaps2734;Parent=Thaps2734;rank=5 chr2 . exon 1715431 1715702 . + . ID=Thaps2734.5;Parent=Thaps2734;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1715790 1716638 . + 0 ID=Thaps2734;Parent=Thaps2734;rank=6 chr2 . exon 1715790 1716638 . + . ID=Thaps2734.6;Parent=Thaps2734;constitutive=1;rank=6 chr2 ensembl protein_coding_gene 1717541 1719241 . + . ID=Thaps2735;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV74];external_name=Thaps2735;logic_name=jgi_thaps3 chr2 ensembl transcript 1717541 1719241 . + . ID=Thaps2735;Parent=Thaps2735;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1717541 1718350 . + 0 ID=Thaps2735;Parent=Thaps2735;rank=1 chr2 . exon 1717541 1718350 . + . ID=Thaps2735.1;Parent=Thaps2735;constitutive=1;rank=1 chr2 . CDS 1718433 1719125 . + 0 ID=Thaps2735;Parent=Thaps2735;rank=2 chr2 . CDS 1719203 1719241 . + 0 ID=Thaps2735;Parent=Thaps2735;rank=3 chr2 . repeat_region 1726261 1726268 . ? . description=dust chr2 ensembl protein_coding_gene 1719731 1720390 . - . ID=Thaps21421;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV75];external_name=Thaps21421;logic_name=jgi_thaps3 chr2 ensembl transcript 1719731 1720390 . - . ID=Thaps21421;Parent=Thaps21421;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1719731 1720390 . - 0 ID=Thaps21421;Parent=Thaps21421;rank=1 chr2 . exon 1719731 1720390 . - . ID=Thaps21421.1;Parent=Thaps21421;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1723053 1724001 . - . ID=Thaps21422;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV77];external_name=Thaps21422;logic_name=jgi_thaps3 chr2 ensembl transcript 1723053 1724001 . - . ID=Thaps21422;Parent=Thaps21422;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1723053 1723271 . - 0 ID=Thaps21422;Parent=Thaps21422;rank=2 chr2 . exon 1723053 1723271 . - . ID=Thaps21422.2;Parent=Thaps21422;constitutive=1;rank=2 chr2 . CDS 1723342 1724001 . - 0 ID=Thaps21422;Parent=Thaps21422;rank=1 chr2 . exon 1723342 1724001 . - . ID=Thaps21422.1;Parent=Thaps21422;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1725015 1726742 . - . ID=Thaps268327;biotype=protein_coding;description=Pseudouridine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BV78];external_name=Thaps268327;logic_name=jgi_thaps3 chr2 ensembl transcript 1725015 1726742 . - . ID=Thaps268327;Parent=Thaps268327;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1725015 1725415 . - 0 ID=Thaps268327;Parent=Thaps268327;rank=5 chr2 . exon 1725015 1725415 . - . ID=Thaps268327.5;Parent=Thaps268327;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1725650 1725806 . - 0 ID=Thaps268327;Parent=Thaps268327;rank=4 chr2 . exon 1725650 1725806 . - . ID=Thaps268327.4;Parent=Thaps268327;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1725900 1725978 . - 0 ID=Thaps268327;Parent=Thaps268327;rank=3 chr2 . exon 1725900 1725978 . - . ID=Thaps268327.3;Parent=Thaps268327;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1726060 1726207 . - 0 ID=Thaps268327;Parent=Thaps268327;rank=2 chr2 . exon 1726060 1726207 . - . ID=Thaps268327.2;Parent=Thaps268327;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1726418 1726742 . - 0 ID=Thaps268327;Parent=Thaps268327;rank=1 chr2 . exon 1726418 1726742 . - . ID=Thaps268327.1;Parent=Thaps268327;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 1718433 1719125 . + . ID=Thaps2735.2;Parent=Thaps2735;constitutive=1;rank=2 chr2 . exon 1719203 1719241 . + . ID=Thaps2735.3;Parent=Thaps2735;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1720519 1723012 . + . ID=Thaps2737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV76];external_name=Thaps2737;logic_name=jgi_thaps3 chr2 ensembl transcript 1720519 1723012 . + . ID=Thaps2737;Parent=Thaps2737;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1720519 1720672 . + 0 ID=Thaps2737;Parent=Thaps2737;rank=1 chr2 . exon 1720519 1720672 . + . ID=Thaps2737.1;Parent=Thaps2737;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1720764 1723012 . + 0 ID=Thaps2737;Parent=Thaps2737;rank=2 chr2 . exon 1720764 1723012 . + . ID=Thaps2737.2;Parent=Thaps2737;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 1728827 1728893 . ? . description=trf chr2 ensembl protein_coding_gene 1729428 1733332 . - . ID=Thaps21425;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV80];external_name=Thaps21425;logic_name=jgi_thaps3 chr2 ensembl transcript 1729428 1733332 . - . ID=Thaps21425;Parent=Thaps21425;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1729428 1731584 . - 0 ID=Thaps21425;Parent=Thaps21425;rank=3 chr2 . exon 1729428 1731584 . - . ID=Thaps21425.3;Parent=Thaps21425;constitutive=1;rank=3 chr2 . CDS 1731904 1731961 . - 0 ID=Thaps21425;Parent=Thaps21425;rank=2 chr2 . exon 1731904 1731961 . - . ID=Thaps21425.2;Parent=Thaps21425;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1731981 1733332 . - 0 ID=Thaps21425;Parent=Thaps21425;rank=1 chr2 . exon 1731981 1733332 . - . ID=Thaps21425.1;Parent=Thaps21425;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1737484 1737912 . - . ID=Thaps268329;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV82];external_name=Thaps268329;logic_name=jgi_thaps3 chr2 ensembl transcript 1737484 1737912 . - . ID=Thaps268329;Parent=Thaps268329;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1737484 1737912 . - 0 ID=Thaps268329;Parent=Thaps268329;rank=1 chr2 . exon 1737484 1737912 . - . ID=Thaps268329.1;Parent=Thaps268329;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1734030 1737389 . + . ID=Thaps2742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV81];external_name=Thaps2742;logic_name=jgi_thaps3 chr2 ensembl transcript 1734030 1737389 . + . ID=Thaps2742;Parent=Thaps2742;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1734030 1737389 . + 0 ID=Thaps2742;Parent=Thaps2742;rank=1 chr2 . exon 1734030 1737389 . + . ID=Thaps2742.1;Parent=Thaps2742;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1728494 1729105 . + . ID=Thaps39622;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV79];external_name=Thaps39622;logic_name=jgi_thaps3 chr2 ensembl transcript 1728494 1729105 . + . ID=Thaps39622;Parent=Thaps39622;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1728494 1729105 . + 0 ID=Thaps39622;Parent=Thaps39622;rank=1 chr2 . exon 1728494 1729105 . + . ID=Thaps39622.1;Parent=Thaps39622;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1743552 1744167 . + . ID=Thaps17362;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV85];external_name=Thaps17362;logic_name=jgi_thaps3 chr2 ensembl transcript 1743552 1744167 . + . ID=Thaps17362;Parent=Thaps17362;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1743552 1743789 . + 0 ID=Thaps17362;Parent=Thaps17362;rank=1 chr2 . exon 1743552 1743789 . + . ID=Thaps17362.1;Parent=Thaps17362;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1743884 1744167 . + 0 ID=Thaps17362;Parent=Thaps17362;rank=2 chr2 . exon 1743884 1744167 . + . ID=Thaps17362.2;Parent=Thaps17362;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 1738697 1740757 . - . ID=Thaps21428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV83];external_name=Thaps21428;logic_name=jgi_thaps3 chr2 ensembl transcript 1738697 1740757 . - . ID=Thaps21428;Parent=Thaps21428;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1738697 1740757 . - 0 ID=Thaps21428;Parent=Thaps21428;rank=1 chr2 . exon 1738697 1740757 . - . ID=Thaps21428.1;Parent=Thaps21428;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1741463 1742836 . - . ID=Thaps21429;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV84];external_name=Thaps21429;logic_name=jgi_thaps3 chr2 ensembl transcript 1741463 1742836 . - . ID=Thaps21429;Parent=Thaps21429;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1741463 1742836 . - 0 ID=Thaps21429;Parent=Thaps21429;rank=1 chr2 . exon 1741463 1742836 . - . ID=Thaps21429.1;Parent=Thaps21429;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1746423 1749062 . - . ID=Thaps21431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV86];external_name=Thaps21431;logic_name=jgi_thaps3 chr2 ensembl transcript 1746423 1749062 . - . ID=Thaps21431;Parent=Thaps21431;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1746423 1749062 . - 0 ID=Thaps21431;Parent=Thaps21431;rank=1 chr2 . exon 1746423 1749062 . - . ID=Thaps21431.1;Parent=Thaps21431;constitutive=1;rank=1 chr2 . repeat_region 1749303 1749320 . ? . description=dust chr2 ensembl protein_coding_gene 1750006 1752007 . + . ID=Thaps21432;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV87];external_name=Thaps21432;logic_name=jgi_thaps3 chr2 ensembl transcript 1750006 1752007 . + . ID=Thaps21432;Parent=Thaps21432;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1750006 1750740 . + 0 ID=Thaps21432;Parent=Thaps21432;rank=1 chr2 . exon 1750006 1750740 . + . ID=Thaps21432.1;Parent=Thaps21432;constitutive=1;rank=1 chr2 . CDS 1750840 1751491 . + 0 ID=Thaps21432;Parent=Thaps21432;rank=2 chr2 . exon 1750840 1751491 . + . ID=Thaps21432.2;Parent=Thaps21432;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1751580 1752007 . + 0 ID=Thaps21432;Parent=Thaps21432;rank=3 chr2 . exon 1751580 1752007 . + . ID=Thaps21432.3;Parent=Thaps21432;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 1752114 1754456 . - . ID=Thaps21433;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV88];external_name=Thaps21433;logic_name=jgi_thaps3 chr2 ensembl transcript 1752114 1754456 . - . ID=Thaps21433;Parent=Thaps21433;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1752114 1752899 . - 0 ID=Thaps21433;Parent=Thaps21433;rank=4 chr2 . exon 1752114 1752899 . - . ID=Thaps21433.4;Parent=Thaps21433;constitutive=1;rank=4 chr2 . CDS 1752923 1752960 . - 0 ID=Thaps21433;Parent=Thaps21433;rank=3 chr2 . exon 1752923 1752960 . - . ID=Thaps21433.3;Parent=Thaps21433;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1753106 1753886 . - 0 ID=Thaps21433;Parent=Thaps21433;rank=2 chr2 . exon 1753106 1753886 . - . ID=Thaps21433.2;Parent=Thaps21433;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1753974 1754456 . - 0 ID=Thaps21433;Parent=Thaps21433;rank=1 chr2 . exon 1753974 1754456 . - . ID=Thaps21433.1;Parent=Thaps21433;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1754769 1756318 . - . ID=Thaps21434;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV89];external_name=Thaps21434;logic_name=jgi_thaps3 chr2 ensembl transcript 1754769 1756318 . - . ID=Thaps21434;Parent=Thaps21434;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1754769 1754910 . - 0 ID=Thaps21434;Parent=Thaps21434;rank=4 chr2 . exon 1754769 1754910 . - . ID=Thaps21434.4;Parent=Thaps21434;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1754995 1755520 . - 0 ID=Thaps21434;Parent=Thaps21434;rank=3 chr2 . exon 1754995 1755520 . - . ID=Thaps21434.3;Parent=Thaps21434;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1755615 1755635 . - 0 ID=Thaps21434;Parent=Thaps21434;rank=2 chr2 . exon 1755615 1755635 . - . ID=Thaps21434.2;Parent=Thaps21434;constitutive=1;rank=2 chr2 . CDS 1755736 1756318 . - 0 ID=Thaps21434;Parent=Thaps21434;rank=1 chr2 . exon 1755736 1756318 . - . ID=Thaps21434.1;Parent=Thaps21434;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1757086 1758083 . + . ID=Thaps261490;biotype=protein_coding;description=Hemk-like sam-dependent methylase protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV90];external_name=Thaps261490;logic_name=jgi_thaps3 chr2 ensembl transcript 1757086 1758083 . + . ID=Thaps261490;Parent=Thaps261490;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1757086 1757158 . + 0 ID=Thaps261490;Parent=Thaps261490;rank=1 chr2 . exon 1757086 1757158 . + . ID=Thaps261490.1;Parent=Thaps261490;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1757231 1757688 . + 0 ID=Thaps261490;Parent=Thaps261490;rank=2 chr2 . exon 1757231 1757688 . + . ID=Thaps261490.2;Parent=Thaps261490;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1757734 1758083 . + 0 ID=Thaps261490;Parent=Thaps261490;rank=3 chr2 . exon 1757734 1758083 . + . ID=Thaps261490.3;Parent=Thaps261490;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . repeat_region 1761075 1761115 . ? . description=trf chr2 ensembl protein_coding_gene 1759666 1760957 . + . ID=Thaps16679;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV91];external_name=Thaps16679;logic_name=jgi_thaps3 chr2 ensembl transcript 1759666 1760957 . + . ID=Thaps16679;Parent=Thaps16679;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1759666 1759832 . + 0 ID=Thaps16679;Parent=Thaps16679;rank=1 chr2 . exon 1759666 1759832 . + . ID=Thaps16679.1;Parent=Thaps16679;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1759994 1760166 . + 0 ID=Thaps16679;Parent=Thaps16679;rank=2 chr2 . exon 1759994 1760166 . + . ID=Thaps16679.2;Parent=Thaps16679;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1760236 1760418 . + 0 ID=Thaps16679;Parent=Thaps16679;rank=3 chr2 . exon 1760236 1760418 . + . ID=Thaps16679.3;Parent=Thaps16679;constitutive=1;rank=3 chr2 . CDS 1760554 1760957 . + 0 ID=Thaps16679;Parent=Thaps16679;rank=4 chr2 . exon 1760554 1760957 . + . ID=Thaps16679.4;Parent=Thaps16679;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 1767784 1769185 . - . ID=Thaps21437;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV94];external_name=Thaps21437;logic_name=jgi_thaps3 chr2 ensembl transcript 1767784 1769185 . - . ID=Thaps21437;Parent=Thaps21437;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1767784 1768562 . - 0 ID=Thaps21437;Parent=Thaps21437;rank=4 chr2 . exon 1767784 1768562 . - . ID=Thaps21437.4;Parent=Thaps21437;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1768655 1768797 . - 0 ID=Thaps21437;Parent=Thaps21437;rank=3 chr2 . CDS 1768900 1769066 . - 0 ID=Thaps21437;Parent=Thaps21437;rank=2 chr2 . CDS 1769150 1769185 . - 0 ID=Thaps21437;Parent=Thaps21437;rank=1 chr2 ensembl protein_coding_gene 1762731 1763799 . - . ID=Thaps261491;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV92];external_name=Thaps261491;logic_name=jgi_thaps3 chr2 ensembl transcript 1762731 1763799 . - . ID=Thaps261491;Parent=Thaps261491;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1762731 1763014 . - 0 ID=Thaps261491;Parent=Thaps261491;rank=2 chr2 . exon 1762731 1763014 . - . ID=Thaps261491.2;Parent=Thaps261491;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1763092 1763799 . - 0 ID=Thaps261491;Parent=Thaps261491;rank=1 chr2 . exon 1763092 1763799 . - . ID=Thaps261491.1;Parent=Thaps261491;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1766163 1767700 . + . ID=Thaps2755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV93];external_name=Thaps2755;logic_name=jgi_thaps3 chr2 ensembl transcript 1766163 1767700 . + . ID=Thaps2755;Parent=Thaps2755;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1766163 1766636 . + 0 ID=Thaps2755;Parent=Thaps2755;rank=1 chr2 . exon 1766163 1766636 . + . ID=Thaps2755.1;Parent=Thaps2755;constitutive=1;rank=1 chr2 . CDS 1766681 1767700 . + 0 ID=Thaps2755;Parent=Thaps2755;rank=2 chr2 . exon 1766681 1767700 . + . ID=Thaps2755.2;Parent=Thaps2755;constitutive=1;rank=2 chr2 . repeat_region 1775396 1775403 . ? . description=dust chr2 . exon 1768655 1768797 . - . ID=Thaps21437.3;Parent=Thaps21437;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . exon 1768900 1769066 . - . ID=Thaps21437.2;Parent=Thaps21437;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . exon 1769150 1769185 . - . ID=Thaps21437.1;Parent=Thaps21437;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1769428 1773772 . - . ID=Thaps21438;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV95];external_name=Thaps21438;logic_name=jgi_thaps3 chr2 ensembl transcript 1769428 1773772 . - . ID=Thaps21438;Parent=Thaps21438;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1769428 1771264 . - 0 ID=Thaps21438;Parent=Thaps21438;rank=4 chr2 . exon 1769428 1771264 . - . ID=Thaps21438.4;Parent=Thaps21438;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1771355 1772431 . - 0 ID=Thaps21438;Parent=Thaps21438;rank=3 chr2 . exon 1771355 1772431 . - . ID=Thaps21438.3;Parent=Thaps21438;constitutive=1;rank=3 chr2 . CDS 1772534 1773125 . - 0 ID=Thaps21438;Parent=Thaps21438;rank=2 chr2 . exon 1772534 1773125 . - . ID=Thaps21438.2;Parent=Thaps21438;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1773151 1773772 . - 0 ID=Thaps21438;Parent=Thaps21438;rank=1 chr2 . exon 1773151 1773772 . - . ID=Thaps21438.1;Parent=Thaps21438;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1774067 1780013 . + . ID=Thaps21439;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV96];external_name=Thaps21439;logic_name=jgi_thaps3 chr2 ensembl transcript 1774067 1780013 . + . ID=Thaps21439;Parent=Thaps21439;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1774067 1776172 . + 0 ID=Thaps21439;Parent=Thaps21439;rank=1 chr2 . exon 1774067 1776172 . + . ID=Thaps21439.1;Parent=Thaps21439;constitutive=1;rank=1 chr2 . CDS 1776264 1777186 . + 0 ID=Thaps21439;Parent=Thaps21439;rank=2 chr2 . exon 1776264 1777186 . + . ID=Thaps21439.2;Parent=Thaps21439;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1777377 1778024 . + 0 ID=Thaps21439;Parent=Thaps21439;rank=3 chr2 . exon 1777377 1778024 . + . ID=Thaps21439.3;Parent=Thaps21439;constitutive=1;rank=3 chr2 . CDS 1778273 1779218 . + 0 ID=Thaps21439;Parent=Thaps21439;rank=4 chr2 . CDS 1779336 1780013 . + 0 ID=Thaps21439;Parent=Thaps21439;rank=5 chr2 . exon 1778273 1779218 . + . ID=Thaps21439.4;Parent=Thaps21439;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . exon 1779336 1780013 . + . ID=Thaps21439.5;Parent=Thaps21439;constitutive=1;rank=5 chr2 ensembl protein_coding_gene 1784054 1784869 . - . ID=Thaps261492;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV98];external_name=Thaps261492;logic_name=jgi_thaps3 chr2 ensembl transcript 1784054 1784869 . - . ID=Thaps261492;Parent=Thaps261492;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1784054 1784172 . - 0 ID=Thaps261492;Parent=Thaps261492;rank=5 chr2 . exon 1784054 1784172 . - . ID=Thaps261492.5;Parent=Thaps261492;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1784274 1784564 . - 0 ID=Thaps261492;Parent=Thaps261492;rank=4 chr2 . exon 1784274 1784564 . - . ID=Thaps261492.4;Parent=Thaps261492;constitutive=1;rank=4 chr2 . CDS 1784642 1784652 . - 0 ID=Thaps261492;Parent=Thaps261492;rank=3 chr2 . exon 1784642 1784652 . - . ID=Thaps261492.3;Parent=Thaps261492;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1784727 1784781 . - 0 ID=Thaps261492;Parent=Thaps261492;rank=2 chr2 . exon 1784727 1784781 . - . ID=Thaps261492.2;Parent=Thaps261492;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1784806 1784869 . - 0 ID=Thaps261492;Parent=Thaps261492;rank=1 chr2 . exon 1784806 1784869 . - . ID=Thaps261492.1;Parent=Thaps261492;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1785964 1788919 . - . ID=Thaps268331;biotype=protein_coding;description=WD40-repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV99];external_name=Thaps268331;logic_name=jgi_thaps3 chr2 ensembl transcript 1785964 1788919 . - . ID=Thaps268331;Parent=Thaps268331;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1785964 1786638 . - 0 ID=Thaps268331;Parent=Thaps268331;rank=4 chr2 . exon 1785964 1786638 . - . ID=Thaps268331.4;Parent=Thaps268331;constitutive=1;rank=4 chr2 . CDS 1786726 1786928 . - 0 ID=Thaps268331;Parent=Thaps268331;rank=3 chr2 . exon 1786726 1786928 . - . ID=Thaps268331.3;Parent=Thaps268331;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1787008 1788197 . - 0 ID=Thaps268331;Parent=Thaps268331;rank=2 chr2 . exon 1787008 1788197 . - . ID=Thaps268331.2;Parent=Thaps268331;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1788255 1788919 . - 0 ID=Thaps268331;Parent=Thaps268331;rank=1 chr2 ensembl protein_coding_gene 1780142 1781101 . - . ID=Thaps2759;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BV97];external_name=Thaps2759;logic_name=jgi_thaps3 chr2 ensembl transcript 1780142 1781101 . - . ID=Thaps2759;Parent=Thaps2759;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1780142 1781101 . - 0 ID=Thaps2759;Parent=Thaps2759;rank=1 chr2 . exon 1780142 1781101 . - . ID=Thaps2759.1;Parent=Thaps2759;constitutive=1;rank=1 chr2 . repeat_region 1789021 1789054 . ? . description=trf chr2 . repeat_region 1789061 1789068 . ? . description=dust chr2 ensembl protein_coding_gene 1792074 1793060 . - . ID=Thaps21444;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVA1];external_name=Thaps21444;logic_name=jgi_thaps3 chr2 ensembl transcript 1792074 1793060 . - . ID=Thaps21444;Parent=Thaps21444;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1792074 1792343 . - 0 ID=Thaps21444;Parent=Thaps21444;rank=4 chr2 . exon 1792074 1792343 . - . ID=Thaps21444.4;Parent=Thaps21444;constitutive=1;rank=4 chr2 . CDS 1792434 1792579 . - 0 ID=Thaps21444;Parent=Thaps21444;rank=3 chr2 . exon 1792434 1792579 . - . ID=Thaps21444.3;Parent=Thaps21444;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1792633 1792823 . - 0 ID=Thaps21444;Parent=Thaps21444;rank=2 chr2 . exon 1792633 1792823 . - . ID=Thaps21444.2;Parent=Thaps21444;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1792987 1793060 . - 0 ID=Thaps21444;Parent=Thaps21444;rank=1 chr2 . exon 1792987 1793060 . - . ID=Thaps21444.1;Parent=Thaps21444;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1794019 1796204 . + . ID=Thaps261495;biotype=protein_coding;description=Metalloprotease [Source:UniProtKB/TrEMBL%3BAcc:B8BVA2];external_name=Thaps261495;logic_name=jgi_thaps3 chr2 ensembl transcript 1794019 1796204 . + . ID=Thaps261495;Parent=Thaps261495;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1794019 1794252 . + 0 ID=Thaps261495;Parent=Thaps261495;rank=1 chr2 . exon 1794019 1794252 . + . ID=Thaps261495.1;Parent=Thaps261495;constitutive=1;rank=1 chr2 . CDS 1794343 1794780 . + 0 ID=Thaps261495;Parent=Thaps261495;rank=2 chr2 . exon 1794343 1794780 . + . ID=Thaps261495.2;Parent=Thaps261495;constitutive=1;rank=2 chr2 . CDS 1794851 1794940 . + 0 ID=Thaps261495;Parent=Thaps261495;rank=3 chr2 . exon 1794851 1794940 . + . ID=Thaps261495.3;Parent=Thaps261495;constitutive=1;rank=3 chr2 . CDS 1795406 1795636 . + 0 ID=Thaps261495;Parent=Thaps261495;rank=4 chr2 . exon 1795406 1795636 . + . ID=Thaps261495.4;Parent=Thaps261495;constitutive=1;rank=4 chr2 . CDS 1795706 1796050 . + 0 ID=Thaps261495;Parent=Thaps261495;rank=5 chr2 . exon 1795706 1796050 . + . ID=Thaps261495.5;Parent=Thaps261495;constitutive=1;rank=5 chr2 . CDS 1796117 1796204 . + 0 ID=Thaps261495;Parent=Thaps261495;rank=6 chr2 . exon 1796117 1796204 . + . ID=Thaps261495.6;Parent=Thaps261495;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . exon 1788255 1788919 . - . ID=Thaps268331.1;Parent=Thaps268331;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1789229 1790271 . + . ID=Thaps27187;biotype=protein_coding;description=Transaldolase [Source:UniProtKB/TrEMBL%3BAcc:B8BVA0];external_name=TAL1_1;logic_name=jgi_thaps3 chr2 ensembl transcript 1789229 1790271 . + . ID=Thaps27187;Parent=Thaps27187;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1789229 1789429 . + 0 ID=Thaps27187;Parent=Thaps27187;rank=1 chr2 . exon 1789229 1789429 . + . ID=Thaps27187.1;Parent=Thaps27187;constitutive=1;rank=1 chr2 . CDS 1789519 1790271 . + 0 ID=Thaps27187;Parent=Thaps27187;rank=2 chr2 . exon 1789519 1790271 . + . ID=Thaps27187.2;Parent=Thaps27187;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1799517 1800106 . + . ID=Thaps21446;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVA3];external_name=Thaps21446;logic_name=jgi_thaps3 chr2 ensembl transcript 1799517 1800106 . + . ID=Thaps21446;Parent=Thaps21446;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1799517 1799823 . + 0 ID=Thaps21446;Parent=Thaps21446;rank=1 chr2 . exon 1799517 1799823 . + . ID=Thaps21446.1;Parent=Thaps21446;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1799907 1799935 . + 0 ID=Thaps21446;Parent=Thaps21446;rank=2 chr2 . exon 1799907 1799935 . + . ID=Thaps21446.2;Parent=Thaps21446;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1800017 1800106 . + 0 ID=Thaps21446;Parent=Thaps21446;rank=3 chr2 . exon 1800017 1800106 . + . ID=Thaps21446.3;Parent=Thaps21446;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1804783 1805694 . + . ID=Thaps21447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVA5];external_name=Thaps21447;logic_name=jgi_thaps3 chr2 ensembl transcript 1804783 1805694 . + . ID=Thaps21447;Parent=Thaps21447;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1804783 1805694 . + 0 ID=Thaps21447;Parent=Thaps21447;rank=1 chr2 . exon 1804783 1805694 . + . ID=Thaps21447.1;Parent=Thaps21447;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1801476 1803911 . - . ID=Thaps2767;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVA4];external_name=Thaps2767;logic_name=jgi_thaps3 chr2 ensembl transcript 1801476 1803911 . - . ID=Thaps2767;Parent=Thaps2767;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1801476 1802032 . - 0 ID=Thaps2767;Parent=Thaps2767;rank=5 chr2 . exon 1801476 1802032 . - . ID=Thaps2767.5;Parent=Thaps2767;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 1802124 1802505 . - 0 ID=Thaps2767;Parent=Thaps2767;rank=4 chr2 . exon 1802124 1802505 . - . ID=Thaps2767.4;Parent=Thaps2767;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1802591 1802686 . - 0 ID=Thaps2767;Parent=Thaps2767;rank=3 chr2 . exon 1802591 1802686 . - . ID=Thaps2767.3;Parent=Thaps2767;constitutive=1;rank=3 chr2 . CDS 1802766 1802880 . - 0 ID=Thaps2767;Parent=Thaps2767;rank=2 chr2 . exon 1802766 1802880 . - . ID=Thaps2767.2;Parent=Thaps2767;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1802920 1803911 . - 0 ID=Thaps2767;Parent=Thaps2767;rank=1 chr2 . exon 1802920 1803911 . - . ID=Thaps2767.1;Parent=Thaps2767;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1806558 1807551 . - . ID=Thaps2769;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVA6];external_name=Thaps2769;logic_name=jgi_thaps3 chr2 ensembl transcript 1806558 1807551 . - . ID=Thaps2769;Parent=Thaps2769;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1806558 1807259 . - 0 ID=Thaps2769;Parent=Thaps2769;rank=2 chr2 . exon 1806558 1807259 . - . ID=Thaps2769.2;Parent=Thaps2769;constitutive=1;rank=2 chr2 . CDS 1807360 1807551 . - 0 ID=Thaps2769;Parent=Thaps2769;rank=1 chr2 . exon 1807360 1807551 . - . ID=Thaps2769.1;Parent=Thaps2769;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1808040 1809144 . + . ID=Thaps2770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVA7];external_name=Thaps2770;logic_name=jgi_thaps3 chr2 ensembl transcript 1808040 1809144 . + . ID=Thaps2770;Parent=Thaps2770;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1808040 1808308 . + 0 ID=Thaps2770;Parent=Thaps2770;rank=1 chr2 . exon 1808040 1808308 . + . ID=Thaps2770.1;Parent=Thaps2770;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1808379 1808685 . + 0 ID=Thaps2770;Parent=Thaps2770;rank=2 chr2 . CDS 1808773 1809144 . + 0 ID=Thaps2770;Parent=Thaps2770;rank=3 chr2 . repeat_region 1813452 1813490 . ? . description=trf chr2 . repeat_region 1813452 1813490 . ? . description=dust chr2 . repeat_region 1815988 1816006 . ? . description=dust chr2 ensembl tRNA_gene 1815918 1815989 . + . ID=EPrTPOG00000000111;biotype=tRNA;description=tRNA-Arg for anticodon UCU [Source:TRNASCAN_SE%3BAcc:tRNA-Arg];external_name=tRNA-Arg;logic_name=ncrna_eg chr2 ensembl transcript 1815918 1815989 . + . ID=EPrTPOT00000000111;Parent=EPrTPOG00000000111;biotype=tRNA;logic_name=ncrna_eg chr2 . exon 1815918 1815989 . + . ID=EPrTPOE00000000111;Parent=EPrTPOT00000000111;constitutive=1;rank=1 chr2 . exon 1808379 1808685 . + . ID=Thaps2770.2;Parent=Thaps2770;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . exon 1808773 1809144 . + . ID=Thaps2770.3;Parent=Thaps2770;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1809224 1810150 . - . ID=Thaps2771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVA8];external_name=Thaps2771;logic_name=jgi_thaps3 chr2 ensembl transcript 1809224 1810150 . - . ID=Thaps2771;Parent=Thaps2771;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1809224 1810150 . - 0 ID=Thaps2771;Parent=Thaps2771;rank=1 chr2 . exon 1809224 1810150 . - . ID=Thaps2771.1;Parent=Thaps2771;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1810421 1813372 . - . ID=Thaps2772;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVA9];external_name=Thaps2772;logic_name=jgi_thaps3 chr2 ensembl transcript 1810421 1813372 . - . ID=Thaps2772;Parent=Thaps2772;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1810421 1810846 . - 0 ID=Thaps2772;Parent=Thaps2772;rank=4 chr2 . exon 1810421 1810846 . - . ID=Thaps2772.4;Parent=Thaps2772;constitutive=1;rank=4 chr2 . CDS 1810917 1811198 . - 0 ID=Thaps2772;Parent=Thaps2772;rank=3 chr2 . exon 1810917 1811198 . - . ID=Thaps2772.3;Parent=Thaps2772;constitutive=1;rank=3 chr2 . CDS 1811226 1811992 . - 0 ID=Thaps2772;Parent=Thaps2772;rank=2 chr2 . exon 1811226 1811992 . - . ID=Thaps2772.2;Parent=Thaps2772;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1812079 1813372 . - 0 ID=Thaps2772;Parent=Thaps2772;rank=1 chr2 . exon 1812079 1813372 . - . ID=Thaps2772.1;Parent=Thaps2772;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1814127 1815698 . + . ID=Thaps2773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVB0];external_name=Thaps2773;logic_name=jgi_thaps3 chr2 ensembl transcript 1814127 1815698 . + . ID=Thaps2773;Parent=Thaps2773;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1814127 1814975 . + 0 ID=Thaps2773;Parent=Thaps2773;rank=1 chr2 . exon 1814127 1814975 . + . ID=Thaps2773.1;Parent=Thaps2773;constitutive=1;rank=1 chr2 . CDS 1815053 1815222 . + 0 ID=Thaps2773;Parent=Thaps2773;rank=2 chr2 . exon 1815053 1815222 . + . ID=Thaps2773.2;Parent=Thaps2773;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1815305 1815698 . + 0 ID=Thaps2773;Parent=Thaps2773;rank=3 chr2 . exon 1815305 1815698 . + . ID=Thaps2773.3;Parent=Thaps2773;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 1817527 1818349 . - . ID=Thaps2774;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVB1];external_name=Thaps2774;logic_name=jgi_thaps3 chr2 ensembl transcript 1817527 1818349 . - . ID=Thaps2774;Parent=Thaps2774;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1817527 1817682 . - 0 ID=Thaps2774;Parent=Thaps2774;rank=2 chr2 . exon 1817527 1817682 . - . ID=Thaps2774.2;Parent=Thaps2774;constitutive=1;rank=2 chr2 . CDS 1817768 1818349 . - 0 ID=Thaps2774;Parent=Thaps2774;rank=1 chr2 . exon 1817768 1818349 . - . ID=Thaps2774.1;Parent=Thaps2774;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1820304 1821935 . - . ID=Thaps21449;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVB3];external_name=Thaps21449;logic_name=jgi_thaps3 chr2 ensembl transcript 1820304 1821935 . - . ID=Thaps21449;Parent=Thaps21449;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1820304 1821935 . - 0 ID=Thaps21449;Parent=Thaps21449;rank=1 chr2 . exon 1820304 1821935 . - . ID=Thaps21449.1;Parent=Thaps21449;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1818665 1820191 . + . ID=Thaps2775;biotype=protein_coding;description=Alanine:glyoxylate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BVB2];external_name=Thaps2775;logic_name=jgi_thaps3 chr2 ensembl transcript 1818665 1820191 . + . ID=Thaps2775;Parent=Thaps2775;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1818665 1820191 . + 0 ID=Thaps2775;Parent=Thaps2775;rank=1 chr2 . exon 1818665 1820191 . + . ID=Thaps2775.1;Parent=Thaps2775;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1822581 1823924 . - . ID=Thaps2777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVB4];external_name=Thaps2777;logic_name=jgi_thaps3 chr2 ensembl transcript 1822581 1823924 . - . ID=Thaps2777;Parent=Thaps2777;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1822581 1823924 . - 0 ID=Thaps2777;Parent=Thaps2777;rank=1 chr2 . exon 1822581 1823924 . - . ID=Thaps2777.1;Parent=Thaps2777;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1825789 1827359 . - . ID=Thaps2779;biotype=protein_coding;description=Arginine biosynthesis bifunctional protein ArgJ%2C mitochondrialGlutamate N-acetyltransferaseAmino-acid acetyltransferaseArginine biosynthesis bifunctional protein ArgJ alpha chainArginine biosynthesis bifunctional protein ArgJ beta chain [Source:UniProtKB/Swiss-Prot%3BAcc:B8BVB6];external_name=Thaps2779;logic_name=jgi_thaps3 chr2 ensembl transcript 1825789 1827359 . - . ID=Thaps2779;Parent=Thaps2779;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1825789 1826879 . - 0 ID=Thaps2779;Parent=Thaps2779;rank=2 chr2 . exon 1825789 1826879 . - . ID=Thaps2779.2;Parent=Thaps2779;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1826984 1827359 . - 0 ID=Thaps2779;Parent=Thaps2779;rank=1 chr2 . exon 1826984 1827359 . - . ID=Thaps2779.1;Parent=Thaps2779;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1827802 1828390 . + . ID=Thaps32321;biotype=protein_coding;description=Thioredoxin f [Source:UniProtKB/TrEMBL%3BAcc:B8BVB7];external_name=TRX-F;logic_name=jgi_thaps3 chr2 ensembl transcript 1827802 1828390 . + . ID=Thaps32321;Parent=Thaps32321;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1827802 1827916 . + 0 ID=Thaps32321;Parent=Thaps32321;rank=1 chr2 . exon 1827802 1827916 . + . ID=Thaps32321.1;Parent=Thaps32321;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1828254 1828390 . + 0 ID=Thaps32321;Parent=Thaps32321;rank=2 chr2 ensembl protein_coding_gene 1824271 1824831 . + . ID=Thaps32399;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVB5];external_name=Thaps32399;logic_name=jgi_thaps3 chr2 ensembl transcript 1824271 1824831 . + . ID=Thaps32399;Parent=Thaps32399;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1824271 1824831 . + 0 ID=Thaps32399;Parent=Thaps32399;rank=1 chr2 . exon 1824271 1824831 . + . ID=Thaps32399.1;Parent=Thaps32399;constitutive=1;rank=1 chr2 . repeat_region 1833593 1833600 . ? . description=dust chr2 . repeat_region 1833628 1833686 . ? . description=dust chr2 . repeat_region 1833645 1833686 . ? . description=trf chr2 . repeat_region 1833646 1833686 . ? . description=trf chr2 ensembl protein_coding_gene 1831315 1832740 . - . ID=Thaps21451;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVC0];external_name=Thaps21451;logic_name=jgi_thaps3 chr2 ensembl transcript 1831315 1832740 . - . ID=Thaps21451;Parent=Thaps21451;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1831315 1831799 . - 0 ID=Thaps21451;Parent=Thaps21451;rank=4 chr2 . exon 1831315 1831799 . - . ID=Thaps21451.4;Parent=Thaps21451;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1831920 1831932 . - 0 ID=Thaps21451;Parent=Thaps21451;rank=3 chr2 . exon 1831920 1831932 . - . ID=Thaps21451.3;Parent=Thaps21451;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1832044 1832147 . - 0 ID=Thaps21451;Parent=Thaps21451;rank=2 chr2 . exon 1832044 1832147 . - . ID=Thaps21451.2;Parent=Thaps21451;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1832230 1832740 . - 0 ID=Thaps21451;Parent=Thaps21451;rank=1 chr2 . exon 1832230 1832740 . - . ID=Thaps21451.1;Parent=Thaps21451;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1833694 1834637 . + . ID=Thaps21452;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVC1];external_name=Thaps21452;logic_name=jgi_thaps3 chr2 ensembl transcript 1833694 1834637 . + . ID=Thaps21452;Parent=Thaps21452;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1833694 1833772 . + 0 ID=Thaps21452;Parent=Thaps21452;rank=1 chr2 . exon 1833694 1833772 . + . ID=Thaps21452.1;Parent=Thaps21452;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1833882 1834130 . + 0 ID=Thaps21452;Parent=Thaps21452;rank=2 chr2 . exon 1833882 1834130 . + . ID=Thaps21452.2;Parent=Thaps21452;constitutive=1;rank=2 chr2 . CDS 1834153 1834637 . + 0 ID=Thaps21452;Parent=Thaps21452;rank=3 chr2 . exon 1834153 1834637 . + . ID=Thaps21452.3;Parent=Thaps21452;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 1834807 1835391 . - . ID=Thaps21453;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVC2];external_name=Thaps21453;logic_name=jgi_thaps3 chr2 ensembl transcript 1834807 1835391 . - . ID=Thaps21453;Parent=Thaps21453;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1834807 1835391 . - 0 ID=Thaps21453;Parent=Thaps21453;rank=1 chr2 . exon 1834807 1835391 . - . ID=Thaps21453.1;Parent=Thaps21453;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1837234 1838768 . - . ID=Thaps21455;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVC4];external_name=Thaps21455;logic_name=jgi_thaps3 chr2 ensembl transcript 1837234 1838768 . - . ID=Thaps21455;Parent=Thaps21455;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1837234 1837902 . - 0 ID=Thaps21455;Parent=Thaps21455;rank=3 chr2 . exon 1837234 1837902 . - . ID=Thaps21455.3;Parent=Thaps21455;constitutive=1;rank=3 chr2 . CDS 1837989 1838151 . - 0 ID=Thaps21455;Parent=Thaps21455;rank=2 chr2 . exon 1837989 1838151 . - . ID=Thaps21455.2;Parent=Thaps21455;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1838242 1838768 . - 0 ID=Thaps21455;Parent=Thaps21455;rank=1 chr2 ensembl protein_coding_gene 1829306 1829543 . - . ID=Thaps261499;biotype=protein_coding;description=Tha4/Hcf106 protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVB8];external_name=Thaps261499;logic_name=jgi_thaps3 chr2 ensembl transcript 1829306 1829543 . - . ID=Thaps261499;Parent=Thaps261499;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1829306 1829543 . - 0 ID=Thaps261499;Parent=Thaps261499;rank=1 chr2 . exon 1829306 1829543 . - . ID=Thaps261499.1;Parent=Thaps261499;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1835809 1836771 . + . ID=Thaps261500;biotype=protein_coding;description=ATP synthase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BVC3];external_name=ATPC_2;logic_name=jgi_thaps3 chr2 ensembl transcript 1835809 1836771 . + . ID=Thaps261500;Parent=Thaps261500;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1835809 1835837 . + 0 ID=Thaps261500;Parent=Thaps261500;rank=1 chr2 . exon 1835809 1835837 . + . ID=Thaps261500.1;Parent=Thaps261500;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1836015 1836176 . + 0 ID=Thaps261500;Parent=Thaps261500;rank=2 chr2 . exon 1836015 1836176 . + . ID=Thaps261500.2;Parent=Thaps261500;constitutive=1;rank=2 chr2 . CDS 1836290 1836458 . + 0 ID=Thaps261500;Parent=Thaps261500;rank=3 chr2 . exon 1836290 1836458 . + . ID=Thaps261500.3;Parent=Thaps261500;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1836555 1836634 . + 0 ID=Thaps261500;Parent=Thaps261500;rank=4 chr2 . exon 1836555 1836634 . + . ID=Thaps261500.4;Parent=Thaps261500;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1836726 1836771 . + 0 ID=Thaps261500;Parent=Thaps261500;rank=5 chr2 . exon 1836726 1836771 . + . ID=Thaps261500.5;Parent=Thaps261500;constitutive=1;ensembl_end_phase=1;rank=5 chr2 ensembl protein_coding_gene 1830448 1830978 . + . ID=Thaps2782;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVB9];external_name=Thaps2782;logic_name=jgi_thaps3 chr2 ensembl transcript 1830448 1830978 . + . ID=Thaps2782;Parent=Thaps2782;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1830448 1830978 . + 0 ID=Thaps2782;Parent=Thaps2782;rank=1 chr2 . exon 1830448 1830978 . + . ID=Thaps2782.1;Parent=Thaps2782;constitutive=1;rank=1 chr2 . exon 1828254 1828390 . + . ID=Thaps32321.2;Parent=Thaps32321;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . exon 1838242 1838768 . - . ID=Thaps21455.1;Parent=Thaps21455;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1843243 1845079 . + . ID=Thaps268335;biotype=protein_coding;description=Glutamate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BVC6];external_name=Thaps268335;logic_name=jgi_thaps3 chr2 ensembl transcript 1843243 1845079 . + . ID=Thaps268335;Parent=Thaps268335;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1843243 1844412 . + 0 ID=Thaps268335;Parent=Thaps268335;rank=1 chr2 . exon 1843243 1844412 . + . ID=Thaps268335.1;Parent=Thaps268335;constitutive=1;rank=1 chr2 . CDS 1844495 1845079 . + 0 ID=Thaps268335;Parent=Thaps268335;rank=2 chr2 . exon 1844495 1845079 . + . ID=Thaps268335.2;Parent=Thaps268335;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1845599 1847670 . + . ID=Thaps2790;biotype=protein_coding;description=2-dehydro-3-deoxyphosphoheptonate aldolase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVC7];external_name=Thaps2790;logic_name=jgi_thaps3 chr2 ensembl transcript 1845599 1847670 . + . ID=Thaps2790;Parent=Thaps2790;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1845599 1847004 . + 0 ID=Thaps2790;Parent=Thaps2790;rank=1 chr2 . exon 1845599 1847004 . + . ID=Thaps2790.1;Parent=Thaps2790;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1847622 1847670 . + 0 ID=Thaps2790;Parent=Thaps2790;rank=2 chr2 . exon 1847622 1847670 . + . ID=Thaps2790.2;Parent=Thaps2790;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1847978 1848843 . + . ID=Thaps2791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVC8];external_name=Thaps2791;logic_name=jgi_thaps3 chr2 ensembl transcript 1847978 1848843 . + . ID=Thaps2791;Parent=Thaps2791;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1847978 1848475 . + 0 ID=Thaps2791;Parent=Thaps2791;rank=1 chr2 . exon 1847978 1848475 . + . ID=Thaps2791.1;Parent=Thaps2791;constitutive=1;rank=1 chr2 . CDS 1848584 1848670 . + 0 ID=Thaps2791;Parent=Thaps2791;rank=2 chr2 . CDS 1848745 1848843 . + 0 ID=Thaps2791;Parent=Thaps2791;rank=3 chr2 ensembl protein_coding_gene 1839654 1839965 . - . ID=Thaps32015;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVC5];external_name=Thaps32015;logic_name=jgi_thaps3 chr2 ensembl transcript 1839654 1839965 . - . ID=Thaps32015;Parent=Thaps32015;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1839654 1839965 . - 0 ID=Thaps32015;Parent=Thaps32015;rank=1 chr2 . exon 1839654 1839965 . - . ID=Thaps32015.1;Parent=Thaps32015;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1854884 1862067 . + . ID=Thaps12234;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVD1];external_name=Thaps12234;logic_name=jgi_thaps3 chr2 ensembl transcript 1854884 1862067 . + . ID=Thaps12234;Parent=Thaps12234;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1854884 1855023 . + 0 ID=Thaps12234;Parent=Thaps12234;rank=1 chr2 . exon 1854884 1855023 . + . ID=Thaps12234.1;Parent=Thaps12234;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1855154 1857553 . + 0 ID=Thaps12234;Parent=Thaps12234;rank=2 chr2 . exon 1855154 1857553 . + . ID=Thaps12234.2;Parent=Thaps12234;constitutive=1;rank=2 chr2 . CDS 1857638 1858572 . + 0 ID=Thaps12234;Parent=Thaps12234;rank=3 chr2 . exon 1857638 1858572 . + . ID=Thaps12234.3;Parent=Thaps12234;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1858618 1859930 . + 0 ID=Thaps12234;Parent=Thaps12234;rank=4 chr2 . CDS 1860026 1860477 . + 0 ID=Thaps12234;Parent=Thaps12234;rank=5 chr2 . CDS 1860555 1862067 . + 0 ID=Thaps12234;Parent=Thaps12234;rank=6 chr2 ensembl protein_coding_gene 1852853 1854109 . - . ID=Thaps21457;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVD0];external_name=Thaps21457;logic_name=jgi_thaps3 chr2 ensembl transcript 1852853 1854109 . - . ID=Thaps21457;Parent=Thaps21457;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1852853 1854109 . - 0 ID=Thaps21457;Parent=Thaps21457;rank=1 chr2 . exon 1852853 1854109 . - . ID=Thaps21457.1;Parent=Thaps21457;constitutive=1;rank=1 chr2 . exon 1848584 1848670 . + . ID=Thaps2791.2;Parent=Thaps2791;constitutive=1;rank=2 chr2 . exon 1848745 1848843 . + . ID=Thaps2791.3;Parent=Thaps2791;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1850454 1851856 . + . ID=Thaps2792;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVC9];external_name=Thaps2792;logic_name=jgi_thaps3 chr2 ensembl transcript 1850454 1851856 . + . ID=Thaps2792;Parent=Thaps2792;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1850454 1850831 . + 0 ID=Thaps2792;Parent=Thaps2792;rank=1 chr2 . exon 1850454 1850831 . + . ID=Thaps2792.1;Parent=Thaps2792;constitutive=1;rank=1 chr2 . CDS 1850892 1851726 . + 0 ID=Thaps2792;Parent=Thaps2792;rank=2 chr2 . exon 1850892 1851726 . + . ID=Thaps2792.2;Parent=Thaps2792;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1851777 1851856 . + 0 ID=Thaps2792;Parent=Thaps2792;rank=3 chr2 . exon 1851777 1851856 . + . ID=Thaps2792.3;Parent=Thaps2792;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . repeat_region 1861512 1861555 . ? . description=trf chr2 . exon 1858618 1859930 . + . ID=Thaps12234.4;Parent=Thaps12234;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . exon 1860026 1860477 . + . ID=Thaps12234.5;Parent=Thaps12234;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . exon 1860555 1862067 . + . ID=Thaps12234.6;Parent=Thaps12234;constitutive=1;ensembl_end_phase=1;rank=6 chr2 ensembl protein_coding_gene 1863659 1865122 . + . ID=Thaps21459;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVD2];external_name=Thaps21459;logic_name=jgi_thaps3 chr2 ensembl transcript 1863659 1865122 . + . ID=Thaps21459;Parent=Thaps21459;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1863659 1865122 . + 0 ID=Thaps21459;Parent=Thaps21459;rank=1 chr2 . exon 1863659 1865122 . + . ID=Thaps21459.1;Parent=Thaps21459;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1865839 1868332 . - . ID=Thaps21460;biotype=protein_coding;description=Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8BVD4];external_name=Thaps21460;logic_name=jgi_thaps3 chr2 ensembl transcript 1865839 1868332 . - . ID=Thaps21460;Parent=Thaps21460;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1865839 1866167 . - 0 ID=Thaps21460;Parent=Thaps21460;rank=4 chr2 . exon 1865839 1866167 . - . ID=Thaps21460.4;Parent=Thaps21460;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1866253 1866367 . - 0 ID=Thaps21460;Parent=Thaps21460;rank=3 chr2 . exon 1866253 1866367 . - . ID=Thaps21460.3;Parent=Thaps21460;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1866451 1866685 . - 0 ID=Thaps21460;Parent=Thaps21460;rank=2 chr2 . exon 1866451 1866685 . - . ID=Thaps21460.2;Parent=Thaps21460;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1866765 1868332 . - 0 ID=Thaps21460;Parent=Thaps21460;rank=1 chr2 . exon 1866765 1868332 . - . ID=Thaps21460.1;Parent=Thaps21460;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1865249 1865806 . + . ID=Thaps2797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVD3];external_name=Thaps2797;logic_name=jgi_thaps3 chr2 ensembl transcript 1865249 1865806 . + . ID=Thaps2797;Parent=Thaps2797;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1865249 1865806 . + 0 ID=Thaps2797;Parent=Thaps2797;rank=1 chr2 . exon 1865249 1865806 . + . ID=Thaps2797.1;Parent=Thaps2797;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1871495 1872245 . - . ID=Thaps18665;biotype=protein_coding;description=ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BVD6];external_name=CLPP2;logic_name=jgi_thaps3 chr2 ensembl transcript 1871495 1872245 . - . ID=Thaps18665;Parent=Thaps18665;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1871495 1871670 . - 0 ID=Thaps18665;Parent=Thaps18665;rank=3 chr2 . exon 1871495 1871670 . - . ID=Thaps18665.3;Parent=Thaps18665;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1871760 1871801 . - 0 ID=Thaps18665;Parent=Thaps18665;rank=2 chr2 . exon 1871760 1871801 . - . ID=Thaps18665.2;Parent=Thaps18665;constitutive=1;rank=2 chr2 . CDS 1871891 1872245 . - 0 ID=Thaps18665;Parent=Thaps18665;rank=1 chr2 . exon 1871891 1872245 . - . ID=Thaps18665.1;Parent=Thaps18665;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1876238 1878705 . + . ID=Thaps268338;biotype=protein_coding;description=Bifunctional fatty acid oxidation enzyme [Source:UniProtKB/TrEMBL%3BAcc:B8BVD7];external_name=FAO1;logic_name=jgi_thaps3 chr2 ensembl transcript 1876238 1878705 . + . ID=Thaps268338;Parent=Thaps268338;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1876238 1877952 . + 0 ID=Thaps268338;Parent=Thaps268338;rank=1 chr2 . exon 1876238 1877952 . + . ID=Thaps268338.1;Parent=Thaps268338;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1878024 1878168 . + 0 ID=Thaps268338;Parent=Thaps268338;rank=2 chr2 . exon 1878024 1878168 . + . ID=Thaps268338.2;Parent=Thaps268338;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1878241 1878705 . + 0 ID=Thaps268338;Parent=Thaps268338;rank=3 chr2 ensembl protein_coding_gene 1870335 1870841 . + . ID=Thaps2799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVD5];external_name=Thaps2799;logic_name=jgi_thaps3 chr2 ensembl transcript 1870335 1870841 . + . ID=Thaps2799;Parent=Thaps2799;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1870335 1870841 . + 0 ID=Thaps2799;Parent=Thaps2799;rank=1 chr2 . exon 1870335 1870841 . + . ID=Thaps2799.1;Parent=Thaps2799;constitutive=1;rank=1 chr2 . repeat_region 1881276 1881328 . ? . description=dust chr2 . repeat_region 1886723 1886746 . ? . description=trf chr2 ensembl protein_coding_gene 1883259 1887078 . - . ID=Thaps21463;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVD9];external_name=Thaps21463;logic_name=jgi_thaps3 chr2 ensembl transcript 1883259 1887078 . - . ID=Thaps21463;Parent=Thaps21463;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1883259 1883677 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=11 chr2 . exon 1883259 1883677 . - . ID=Thaps21463.11;Parent=Thaps21463;constitutive=1;ensembl_end_phase=2;rank=11 chr2 . CDS 1883737 1884274 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=10 chr2 . exon 1883737 1884274 . - . ID=Thaps21463.10;Parent=Thaps21463;constitutive=1;ensembl_end_phase=1;rank=10 chr2 . CDS 1884352 1884989 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=9 chr2 . exon 1884352 1884989 . - . ID=Thaps21463.9;Parent=Thaps21463;constitutive=1;ensembl_end_phase=2;rank=9 chr2 . CDS 1885076 1885375 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=8 chr2 . exon 1885076 1885375 . - . ID=Thaps21463.8;Parent=Thaps21463;constitutive=1;rank=8 chr2 . CDS 1885452 1885566 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=7 chr2 . exon 1885452 1885566 . - . ID=Thaps21463.7;Parent=Thaps21463;constitutive=1;ensembl_end_phase=1;rank=7 chr2 . CDS 1885629 1885672 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=6 chr2 . exon 1885629 1885672 . - . ID=Thaps21463.6;Parent=Thaps21463;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 1885753 1885876 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=5 chr2 . exon 1885753 1885876 . - . ID=Thaps21463.5;Parent=Thaps21463;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 1885957 1886058 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=4 chr2 . exon 1885957 1886058 . - . ID=Thaps21463.4;Parent=Thaps21463;constitutive=1;rank=4 chr2 . CDS 1886105 1886478 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=3 chr2 . exon 1886105 1886478 . - . ID=Thaps21463.3;Parent=Thaps21463;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1886578 1886908 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=2 chr2 . exon 1886578 1886908 . - . ID=Thaps21463.2;Parent=Thaps21463;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1886986 1887078 . - 0 ID=Thaps21463;Parent=Thaps21463;rank=1 chr2 . exon 1886986 1887078 . - . ID=Thaps21463.1;Parent=Thaps21463;constitutive=1;rank=1 chr2 . exon 1878241 1878705 . + . ID=Thaps268338.3;Parent=Thaps268338;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1887462 1889120 . + . ID=Thaps2804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVE0];external_name=Thaps2804;logic_name=jgi_thaps3 chr2 ensembl transcript 1887462 1889120 . + . ID=Thaps2804;Parent=Thaps2804;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1887462 1887830 . + 0 ID=Thaps2804;Parent=Thaps2804;rank=1 chr2 . exon 1887462 1887830 . + . ID=Thaps2804.1;Parent=Thaps2804;constitutive=1;rank=1 chr2 . CDS 1887914 1888918 . + 0 ID=Thaps2804;Parent=Thaps2804;rank=2 chr2 . exon 1887914 1888918 . + . ID=Thaps2804.2;Parent=Thaps2804;constitutive=1;rank=2 chr2 . CDS 1889073 1889120 . + 0 ID=Thaps2804;Parent=Thaps2804;rank=3 chr2 ensembl protein_coding_gene 1881137 1883149 . + . ID=Thaps32395;biotype=protein_coding;description=DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8BVD8];external_name=RPOT;logic_name=jgi_thaps3 chr2 ensembl transcript 1881137 1883149 . + . ID=Thaps32395;Parent=Thaps32395;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1881137 1881259 . + 0 ID=Thaps32395;Parent=Thaps32395;rank=1 chr2 . exon 1881137 1881259 . + . ID=Thaps32395.1;Parent=Thaps32395;constitutive=1;rank=1 chr2 . CDS 1881345 1881575 . + 0 ID=Thaps32395;Parent=Thaps32395;rank=2 chr2 . exon 1881345 1881575 . + . ID=Thaps32395.2;Parent=Thaps32395;constitutive=1;rank=2 chr2 . CDS 1881630 1881883 . + 0 ID=Thaps32395;Parent=Thaps32395;rank=3 chr2 . exon 1881630 1881883 . + . ID=Thaps32395.3;Parent=Thaps32395;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1881970 1883149 . + 0 ID=Thaps32395;Parent=Thaps32395;rank=4 chr2 . exon 1881970 1883149 . + . ID=Thaps32395.4;Parent=Thaps32395;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 1891780 1893102 . - . ID=Thaps21464;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVE2];external_name=Thaps21464;logic_name=jgi_thaps3 chr2 ensembl transcript 1891780 1893102 . - . ID=Thaps21464;Parent=Thaps21464;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1891780 1893102 . - 0 ID=Thaps21464;Parent=Thaps21464;rank=1 chr2 . exon 1891780 1893102 . - . ID=Thaps21464.1;Parent=Thaps21464;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1893449 1895929 . + . ID=Thaps21465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVE3];external_name=Thaps21465;logic_name=jgi_thaps3 chr2 ensembl transcript 1893449 1895929 . + . ID=Thaps21465;Parent=Thaps21465;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1893449 1895929 . + 0 ID=Thaps21465;Parent=Thaps21465;rank=1 chr2 . exon 1893449 1895929 . + . ID=Thaps21465.1;Parent=Thaps21465;constitutive=1;rank=1 chr2 . exon 1889073 1889120 . + . ID=Thaps2804.3;Parent=Thaps2804;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1889490 1890632 . - . ID=Thaps31771;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVE1];external_name=Thaps31771;logic_name=jgi_thaps3 chr2 ensembl transcript 1889490 1890632 . - . ID=Thaps31771;Parent=Thaps31771;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1889490 1890632 . - 0 ID=Thaps31771;Parent=Thaps31771;rank=1 chr2 . exon 1889490 1890632 . - . ID=Thaps31771.1;Parent=Thaps31771;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1896534 1896686 . + . ID=Thaps31796;biotype=protein_coding;description=RL39%2C ribosomal protein 39 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BVE4];external_name=RL39;logic_name=jgi_thaps3 chr2 ensembl transcript 1896534 1896686 . + . ID=Thaps31796;Parent=Thaps31796;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1896534 1896686 . + 0 ID=Thaps31796;Parent=Thaps31796;rank=1 chr2 . exon 1896534 1896686 . + . ID=Thaps31796.1;Parent=Thaps31796;constitutive=1;rank=1 chr2 . repeat_region 1905782 1905808 . ? . description=trf chr2 . repeat_region 1905782 1905808 . ? . description=dust chr2 ensembl gene 1901975 1904103 . + . ID=Thaps261512;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr2 ensembl transcript 1901975 1904103 . + . ID=Thaps261512;Parent=Thaps261512;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr2 . exon 1901975 1902281 . + . ID=Thaps261512.1;Parent=Thaps261512;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 1902327 1902593 . + . ID=Thaps261512.2;Parent=Thaps261512;constitutive=1;rank=2 chr2 . exon 1902702 1903641 . + . ID=Thaps261512.3;Parent=Thaps261512;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . exon 1903720 1904103 . + . ID=Thaps261512.4;Parent=Thaps261512;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 1898840 1901038 . - . ID=Thaps2808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVE5];external_name=Thaps2808;logic_name=jgi_thaps3 chr2 ensembl transcript 1898840 1901038 . - . ID=Thaps2808;Parent=Thaps2808;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1898840 1899327 . - 0 ID=Thaps2808;Parent=Thaps2808;rank=3 chr2 . exon 1898840 1899327 . - . ID=Thaps2808.3;Parent=Thaps2808;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1899408 1899479 . - 0 ID=Thaps2808;Parent=Thaps2808;rank=2 chr2 . exon 1899408 1899479 . - . ID=Thaps2808.2;Parent=Thaps2808;constitutive=1;rank=2 chr2 . CDS 1899556 1901038 . - 0 ID=Thaps2808;Parent=Thaps2808;rank=1 chr2 . exon 1899556 1901038 . - . ID=Thaps2808.1;Parent=Thaps2808;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . repeat_region 1911821 1915722 . - . description=MuDR1_TP chr2 . repeat_region 1915692 1916045 . - . description=MuDR1_TP chr2 ensembl protein_coding_gene 1917893 1918261 . - . ID=Thaps268343;biotype=protein_coding;description=High light induced protein 2 [Source:UniProtKB/TrEMBL%3BAcc:B8BVE9];external_name=HLIP2;logic_name=jgi_thaps3 chr2 ensembl transcript 1917893 1918261 . - . ID=Thaps268343;Parent=Thaps268343;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1917893 1918261 . - 0 ID=Thaps268343;Parent=Thaps268343;rank=1 chr2 . exon 1917893 1918261 . - . ID=Thaps268343.1;Parent=Thaps268343;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1916313 1917674 . + . ID=Thaps2812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVE8];external_name=Thaps2812;logic_name=jgi_thaps3 chr2 ensembl transcript 1916313 1917674 . + . ID=Thaps2812;Parent=Thaps2812;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1916313 1916400 . + 0 ID=Thaps2812;Parent=Thaps2812;rank=1 chr2 . exon 1916313 1916400 . + . ID=Thaps2812.1;Parent=Thaps2812;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1916498 1917025 . + 0 ID=Thaps2812;Parent=Thaps2812;rank=2 chr2 . exon 1916498 1917025 . + . ID=Thaps2812.2;Parent=Thaps2812;constitutive=1;rank=2 chr2 . CDS 1917101 1917157 . + 0 ID=Thaps2812;Parent=Thaps2812;rank=3 chr2 . exon 1917101 1917157 . + . ID=Thaps2812.3;Parent=Thaps2812;constitutive=1;rank=3 chr2 . CDS 1917229 1917674 . + 0 ID=Thaps2812;Parent=Thaps2812;rank=4 chr2 . exon 1917229 1917674 . + . ID=Thaps2812.4;Parent=Thaps2812;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 1908454 1908746 . - . ID=Thaps31726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVE6];external_name=Thaps31726;logic_name=jgi_thaps3 chr2 ensembl transcript 1908454 1908746 . - . ID=Thaps31726;Parent=Thaps31726;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1908454 1908562 . - 0 ID=Thaps31726;Parent=Thaps31726;rank=2 chr2 . exon 1908454 1908562 . - . ID=Thaps31726.2;Parent=Thaps31726;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1908661 1908746 . - 0 ID=Thaps31726;Parent=Thaps31726;rank=1 chr2 . exon 1908661 1908746 . - . ID=Thaps31726.1;Parent=Thaps31726;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1910953 1911447 . - . ID=Thaps32181;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVE7];external_name=Thaps32181;logic_name=jgi_thaps3 chr2 ensembl transcript 1910953 1911447 . - . ID=Thaps32181;Parent=Thaps32181;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1910953 1911177 . - 0 ID=Thaps32181;Parent=Thaps32181;rank=2 chr2 . exon 1910953 1911177 . - . ID=Thaps32181.2;Parent=Thaps32181;constitutive=1;rank=2 chr2 . CDS 1911367 1911447 . - 0 ID=Thaps32181;Parent=Thaps32181;rank=1 chr2 . exon 1911367 1911447 . - . ID=Thaps32181.1;Parent=Thaps32181;constitutive=1;rank=1 chr2 . repeat_region 1920699 1920740 . ? . description=dust chr2 . repeat_region 1922433 1922451 . ? . description=dust chr2 ensembl protein_coding_gene 1928027 1930964 . - . ID=Thaps21469;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVF4];external_name=Thaps21469;logic_name=jgi_thaps3 chr2 ensembl transcript 1928027 1930964 . - . ID=Thaps21469;Parent=Thaps21469;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1928027 1930534 . - 0 ID=Thaps21469;Parent=Thaps21469;rank=2 chr2 . exon 1928027 1930534 . - . ID=Thaps21469.2;Parent=Thaps21469;constitutive=1;rank=2 chr2 . CDS 1930569 1930964 . - 0 ID=Thaps21469;Parent=Thaps21469;rank=1 chr2 ensembl protein_coding_gene 1922785 1924889 . + . ID=Thaps268344;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVF2];external_name=Thaps268344;logic_name=jgi_thaps3 chr2 ensembl transcript 1922785 1924889 . + . ID=Thaps268344;Parent=Thaps268344;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1922785 1924502 . + 0 ID=Thaps268344;Parent=Thaps268344;rank=1 chr2 . exon 1922785 1924502 . + . ID=Thaps268344.1;Parent=Thaps268344;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1924589 1924889 . + 0 ID=Thaps268344;Parent=Thaps268344;rank=2 chr2 . exon 1924589 1924889 . + . ID=Thaps268344.2;Parent=Thaps268344;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1920818 1922045 . + . ID=Thaps27208;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVF1];external_name=Thaps27208;logic_name=jgi_thaps3 chr2 ensembl transcript 1920818 1922045 . + . ID=Thaps27208;Parent=Thaps27208;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1920818 1920997 . + 0 ID=Thaps27208;Parent=Thaps27208;rank=1 chr2 . exon 1920818 1920997 . + . ID=Thaps27208.1;Parent=Thaps27208;constitutive=1;rank=1 chr2 . CDS 1921101 1921194 . + 0 ID=Thaps27208;Parent=Thaps27208;rank=2 chr2 . exon 1921101 1921194 . + . ID=Thaps27208.2;Parent=Thaps27208;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1921270 1921554 . + 0 ID=Thaps27208;Parent=Thaps27208;rank=3 chr2 . exon 1921270 1921554 . + . ID=Thaps27208.3;Parent=Thaps27208;constitutive=1;rank=3 chr2 . CDS 1921688 1921856 . + 0 ID=Thaps27208;Parent=Thaps27208;rank=4 chr2 . exon 1921688 1921856 . + . ID=Thaps27208.4;Parent=Thaps27208;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1921937 1922045 . + 0 ID=Thaps27208;Parent=Thaps27208;rank=5 chr2 . exon 1921937 1922045 . + . ID=Thaps27208.5;Parent=Thaps27208;constitutive=1;ensembl_end_phase=1;rank=5 chr2 ensembl protein_coding_gene 1918663 1920486 . - . ID=Thaps2814;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVF0];external_name=Thaps2814;logic_name=jgi_thaps3 chr2 ensembl transcript 1918663 1920486 . - . ID=Thaps2814;Parent=Thaps2814;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1918663 1920486 . - 0 ID=Thaps2814;Parent=Thaps2814;rank=1 chr2 . exon 1918663 1920486 . - . ID=Thaps2814.1;Parent=Thaps2814;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1924941 1926583 . - . ID=Thaps2816;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVF3];external_name=Thaps2816;logic_name=jgi_thaps3 chr2 ensembl transcript 1924941 1926583 . - . ID=Thaps2816;Parent=Thaps2816;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1924941 1925278 . - 0 ID=Thaps2816;Parent=Thaps2816;rank=4 chr2 . exon 1924941 1925278 . - . ID=Thaps2816.4;Parent=Thaps2816;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1925355 1925493 . - 0 ID=Thaps2816;Parent=Thaps2816;rank=3 chr2 . exon 1925355 1925493 . - . ID=Thaps2816.3;Parent=Thaps2816;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1925589 1926408 . - 0 ID=Thaps2816;Parent=Thaps2816;rank=2 chr2 . exon 1925589 1926408 . - . ID=Thaps2816.2;Parent=Thaps2816;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1926504 1926583 . - 0 ID=Thaps2816;Parent=Thaps2816;rank=1 chr2 . exon 1926504 1926583 . - . ID=Thaps2816.1;Parent=Thaps2816;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . exon 1930569 1930964 . - . ID=Thaps21469.1;Parent=Thaps21469;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1933123 1934236 . - . ID=Thaps261516;biotype=protein_coding;description=ArfGAP [Source:UniProtKB/TrEMBL%3BAcc:B8BVF6];external_name=Thaps261516;logic_name=jgi_thaps3 chr2 ensembl transcript 1933123 1934236 . - . ID=Thaps261516;Parent=Thaps261516;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1933123 1933414 . - 0 ID=Thaps261516;Parent=Thaps261516;rank=5 chr2 . exon 1933123 1933414 . - . ID=Thaps261516.5;Parent=Thaps261516;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 1933499 1933529 . - 0 ID=Thaps261516;Parent=Thaps261516;rank=4 chr2 . exon 1933499 1933529 . - . ID=Thaps261516.4;Parent=Thaps261516;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 1933599 1933737 . - 0 ID=Thaps261516;Parent=Thaps261516;rank=3 chr2 . exon 1933599 1933737 . - . ID=Thaps261516.3;Parent=Thaps261516;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1933877 1934076 . - 0 ID=Thaps261516;Parent=Thaps261516;rank=2 chr2 . exon 1933877 1934076 . - . ID=Thaps261516.2;Parent=Thaps261516;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1934122 1934236 . - 0 ID=Thaps261516;Parent=Thaps261516;rank=1 chr2 . exon 1934122 1934236 . - . ID=Thaps261516.1;Parent=Thaps261516;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1937126 1940712 . + . ID=Thaps268346;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVF7];external_name=Thaps268346;logic_name=jgi_thaps3 chr2 ensembl transcript 1937126 1940712 . + . ID=Thaps268346;Parent=Thaps268346;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1937126 1937623 . + 0 ID=Thaps268346;Parent=Thaps268346;rank=1 chr2 . exon 1937126 1937623 . + . ID=Thaps268346.1;Parent=Thaps268346;constitutive=1;rank=1 chr2 . CDS 1937932 1938451 . + 0 ID=Thaps268346;Parent=Thaps268346;rank=2 chr2 . exon 1937932 1938451 . + . ID=Thaps268346.2;Parent=Thaps268346;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1938785 1939531 . + 0 ID=Thaps268346;Parent=Thaps268346;rank=3 chr2 . CDS 1939559 1939628 . + 0 ID=Thaps268346;Parent=Thaps268346;rank=4 chr2 . CDS 1939675 1939742 . + 0 ID=Thaps268346;Parent=Thaps268346;rank=5 chr2 . CDS 1939766 1940212 . + 0 ID=Thaps268346;Parent=Thaps268346;rank=6 chr2 . CDS 1940387 1940712 . + 0 ID=Thaps268346;Parent=Thaps268346;rank=7 chr2 ensembl protein_coding_gene 1931474 1932282 . + . ID=Thaps2818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVF5];external_name=Thaps2818;logic_name=jgi_thaps3 chr2 ensembl transcript 1931474 1932282 . + . ID=Thaps2818;Parent=Thaps2818;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1931474 1931648 . + 0 ID=Thaps2818;Parent=Thaps2818;rank=1 chr2 . exon 1931474 1931648 . + . ID=Thaps2818.1;Parent=Thaps2818;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1931823 1932046 . + 0 ID=Thaps2818;Parent=Thaps2818;rank=2 chr2 . exon 1931823 1932046 . + . ID=Thaps2818.2;Parent=Thaps2818;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1932109 1932282 . + 0 ID=Thaps2818;Parent=Thaps2818;rank=3 chr2 . exon 1932109 1932282 . + . ID=Thaps2818.3;Parent=Thaps2818;constitutive=1;rank=3 chr2 . repeat_region 1940212 1940559 . ? . description=trf chr2 ensembl protein_coding_gene 1941282 1942077 . - . ID=Thaps21472;biotype=protein_coding;external_name=Thaps21472;logic_name=jgi_thaps3 chr2 ensembl transcript 1941282 1942077 . - . ID=Thaps21472;Parent=Thaps21472;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1941282 1941861 . - 0 ID=Thaps21472;Parent=Thaps21472;rank=2 chr2 . exon 1941282 1941861 . - . ID=Thaps21472.2;Parent=Thaps21472;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1941992 1942077 . - 0 ID=Thaps21472;Parent=Thaps21472;rank=1 chr2 . exon 1941992 1942077 . - . ID=Thaps21472.1;Parent=Thaps21472;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . exon 1938785 1939531 . + . ID=Thaps268346.3;Parent=Thaps268346;constitutive=1;rank=3 chr2 . exon 1939559 1939628 . + . ID=Thaps268346.4;Parent=Thaps268346;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . exon 1939675 1939742 . + . ID=Thaps268346.5;Parent=Thaps268346;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . exon 1939766 1940212 . + . ID=Thaps268346.6;Parent=Thaps268346;constitutive=1;rank=6 chr2 . exon 1940387 1940712 . + . ID=Thaps268346.7;Parent=Thaps268346;constitutive=1;ensembl_end_phase=2;rank=7 chr2 ensembl protein_coding_gene 1946325 1948398 . + . ID=Thaps2824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVG0];external_name=Thaps2824;logic_name=jgi_thaps3 chr2 ensembl transcript 1946325 1948398 . + . ID=Thaps2824;Parent=Thaps2824;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1946325 1946672 . + 0 ID=Thaps2824;Parent=Thaps2824;rank=1 chr2 . exon 1946325 1946672 . + . ID=Thaps2824.1;Parent=Thaps2824;constitutive=1;rank=1 chr2 . CDS 1946788 1946918 . + 0 ID=Thaps2824;Parent=Thaps2824;rank=2 chr2 . exon 1946788 1946918 . + . ID=Thaps2824.2;Parent=Thaps2824;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1947019 1947714 . + 0 ID=Thaps2824;Parent=Thaps2824;rank=3 chr2 . exon 1947019 1947714 . + . ID=Thaps2824.3;Parent=Thaps2824;constitutive=1;rank=3 chr2 . CDS 1947807 1948398 . + 0 ID=Thaps2824;Parent=Thaps2824;rank=4 chr2 . exon 1947807 1948398 . + . ID=Thaps2824.4;Parent=Thaps2824;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 1942682 1943203 . + . ID=Thaps283;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVF8];external_name=Thaps283;logic_name=jgi_thaps3 chr2 ensembl transcript 1942682 1943203 . + . ID=Thaps283;Parent=Thaps283;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1942682 1943203 . + 0 ID=Thaps283;Parent=Thaps283;rank=1 chr2 . exon 1942682 1943203 . + . ID=Thaps283.1;Parent=Thaps283;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1944497 1945360 . - . ID=Thaps31764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVF9];external_name=Thaps31764;logic_name=jgi_thaps3 chr2 ensembl transcript 1944497 1945360 . - . ID=Thaps31764;Parent=Thaps31764;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1944497 1945360 . - 0 ID=Thaps31764;Parent=Thaps31764;rank=1 chr2 . exon 1944497 1945360 . - . ID=Thaps31764.1;Parent=Thaps31764;constitutive=1;rank=1 chr2 . repeat_region 1955029 1955143 . ? . description=dust chr2 ensembl protein_coding_gene 1948594 1949504 . - . ID=Thaps21475;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVG1];external_name=Thaps21475;logic_name=jgi_thaps3 chr2 ensembl transcript 1948594 1949504 . - . ID=Thaps21475;Parent=Thaps21475;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1948594 1949175 . - 0 ID=Thaps21475;Parent=Thaps21475;rank=2 chr2 . exon 1948594 1949175 . - . ID=Thaps21475.2;Parent=Thaps21475;constitutive=1;rank=2 chr2 . CDS 1949289 1949504 . - 0 ID=Thaps21475;Parent=Thaps21475;rank=1 chr2 . exon 1949289 1949504 . - . ID=Thaps21475.1;Parent=Thaps21475;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1955143 1957715 . + . ID=Thaps21476;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVG4];external_name=Thaps21476;logic_name=jgi_thaps3 chr2 ensembl transcript 1955143 1957715 . + . ID=Thaps21476;Parent=Thaps21476;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1955143 1955513 . + 0 ID=Thaps21476;Parent=Thaps21476;rank=1 chr2 . exon 1955143 1955513 . + . ID=Thaps21476.1;Parent=Thaps21476;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1955610 1956003 . + 0 ID=Thaps21476;Parent=Thaps21476;rank=2 chr2 . exon 1955610 1956003 . + . ID=Thaps21476.2;Parent=Thaps21476;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1956100 1956317 . + 0 ID=Thaps21476;Parent=Thaps21476;rank=3 chr2 . exon 1956100 1956317 . + . ID=Thaps21476.3;Parent=Thaps21476;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1956479 1957715 . + 0 ID=Thaps21476;Parent=Thaps21476;rank=4 chr2 . exon 1956479 1957715 . + . ID=Thaps21476.4;Parent=Thaps21476;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 1950173 1951847 . - . ID=Thaps2826;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVG2];external_name=Thaps2826;logic_name=jgi_thaps3 chr2 ensembl transcript 1950173 1951847 . - . ID=Thaps2826;Parent=Thaps2826;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1950173 1951629 . - 0 ID=Thaps2826;Parent=Thaps2826;rank=2 chr2 . exon 1950173 1951629 . - . ID=Thaps2826.2;Parent=Thaps2826;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1951742 1951847 . - 0 ID=Thaps2826;Parent=Thaps2826;rank=1 chr2 . exon 1951742 1951847 . - . ID=Thaps2826.1;Parent=Thaps2826;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1952122 1954254 . - . ID=Thaps32201;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVG3];external_name=Thaps32201;logic_name=jgi_thaps3 chr2 ensembl transcript 1952122 1954254 . - . ID=Thaps32201;Parent=Thaps32201;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1952122 1954254 . - 0 ID=Thaps32201;Parent=Thaps32201;rank=1 chr2 . exon 1952122 1954254 . - . ID=Thaps32201.1;Parent=Thaps32201;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1959771 1960995 . + . ID=Thaps21477;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVG5];external_name=Thaps21477;logic_name=jgi_thaps3 chr2 ensembl transcript 1959771 1960995 . + . ID=Thaps21477;Parent=Thaps21477;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1959771 1960429 . + 0 ID=Thaps21477;Parent=Thaps21477;rank=1 chr2 . exon 1959771 1960429 . + . ID=Thaps21477.1;Parent=Thaps21477;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1960533 1960995 . + 0 ID=Thaps21477;Parent=Thaps21477;rank=2 chr2 . exon 1960533 1960995 . + . ID=Thaps21477.2;Parent=Thaps21477;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 1967470 1969958 . - . ID=Thaps21480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVH1];external_name=Thaps21480;logic_name=jgi_thaps3 chr2 ensembl transcript 1967470 1969958 . - . ID=Thaps21480;Parent=Thaps21480;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1967470 1967650 . - 0 ID=Thaps21480;Parent=Thaps21480;rank=3 chr2 . exon 1967470 1967650 . - . ID=Thaps21480.3;Parent=Thaps21480;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1967732 1968300 . - 0 ID=Thaps21480;Parent=Thaps21480;rank=2 chr2 . exon 1967732 1968300 . - . ID=Thaps21480.2;Parent=Thaps21480;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1968399 1969958 . - 0 ID=Thaps21480;Parent=Thaps21480;rank=1 chr2 ensembl protein_coding_gene 1961661 1962309 . + . ID=Thaps26131;biotype=protein_coding;description=Cytochrome b6-f complex iron-sulfur subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BVG6];external_name=Thaps26131;logic_name=jgi_thaps3 chr2 ensembl transcript 1961661 1962309 . + . ID=Thaps26131;Parent=Thaps26131;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1961661 1962059 . + 0 ID=Thaps26131;Parent=Thaps26131;rank=1 chr2 . exon 1961661 1962059 . + . ID=Thaps26131.1;Parent=Thaps26131;constitutive=1;rank=1 chr2 . CDS 1962163 1962309 . + 0 ID=Thaps26131;Parent=Thaps26131;rank=2 chr2 . exon 1962163 1962309 . + . ID=Thaps26131.2;Parent=Thaps26131;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 1964341 1965677 . - . ID=Thaps268350;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVG9];external_name=Thaps268350;logic_name=jgi_thaps3 chr2 ensembl transcript 1964341 1965677 . - . ID=Thaps268350;Parent=Thaps268350;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1964341 1964909 . - 0 ID=Thaps268350;Parent=Thaps268350;rank=4 chr2 . exon 1964341 1964909 . - . ID=Thaps268350.4;Parent=Thaps268350;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 1965021 1965066 . - 0 ID=Thaps268350;Parent=Thaps268350;rank=3 chr2 . exon 1965021 1965066 . - . ID=Thaps268350.3;Parent=Thaps268350;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 1965118 1965215 . - 0 ID=Thaps268350;Parent=Thaps268350;rank=2 chr2 . exon 1965118 1965215 . - . ID=Thaps268350.2;Parent=Thaps268350;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 1965296 1965677 . - 0 ID=Thaps268350;Parent=Thaps268350;rank=1 chr2 . exon 1965296 1965677 . - . ID=Thaps268350.1;Parent=Thaps268350;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1962654 1963592 . - . ID=Thaps2831;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVG7];external_name=Thaps2831;logic_name=jgi_thaps3 chr2 ensembl transcript 1962654 1963592 . - . ID=Thaps2831;Parent=Thaps2831;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1962654 1963592 . - 0 ID=Thaps2831;Parent=Thaps2831;rank=1 chr2 . exon 1962654 1963592 . - . ID=Thaps2831.1;Parent=Thaps2831;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1963728 1964270 . + . ID=Thaps2832;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVG8];external_name=Thaps2832;logic_name=jgi_thaps3 chr2 ensembl transcript 1963728 1964270 . + . ID=Thaps2832;Parent=Thaps2832;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1963728 1964270 . + 0 ID=Thaps2832;Parent=Thaps2832;rank=1 chr2 . exon 1963728 1964270 . + . ID=Thaps2832.1;Parent=Thaps2832;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1966367 1967284 . + . ID=Thaps32066;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVH0];external_name=Thaps32066;logic_name=jgi_thaps3 chr2 ensembl transcript 1966367 1967284 . + . ID=Thaps32066;Parent=Thaps32066;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1966367 1967284 . + 0 ID=Thaps32066;Parent=Thaps32066;rank=1 chr2 . exon 1966367 1967284 . + . ID=Thaps32066.1;Parent=Thaps32066;constitutive=1;rank=1 chr2 . exon 1968399 1969958 . - . ID=Thaps21480.1;Parent=Thaps21480;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1971819 1974997 . - . ID=Thaps2837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVH3];external_name=Thaps2837;logic_name=jgi_thaps3 chr2 ensembl transcript 1971819 1974997 . - . ID=Thaps2837;Parent=Thaps2837;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1971819 1972648 . - 0 ID=Thaps2837;Parent=Thaps2837;rank=3 chr2 . exon 1971819 1972648 . - . ID=Thaps2837.3;Parent=Thaps2837;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1972718 1973977 . - 0 ID=Thaps2837;Parent=Thaps2837;rank=2 chr2 . exon 1972718 1973977 . - . ID=Thaps2837.2;Parent=Thaps2837;constitutive=1;rank=2 chr2 . CDS 1974001 1974997 . - 0 ID=Thaps2837;Parent=Thaps2837;rank=1 chr2 . exon 1974001 1974997 . - . ID=Thaps2837.1;Parent=Thaps2837;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1975514 1979270 . + . ID=Thaps2838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVH4];external_name=Thaps2838;logic_name=jgi_thaps3 chr2 ensembl transcript 1975514 1979270 . + . ID=Thaps2838;Parent=Thaps2838;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1975514 1976450 . + 0 ID=Thaps2838;Parent=Thaps2838;rank=1 chr2 . exon 1975514 1976450 . + . ID=Thaps2838.1;Parent=Thaps2838;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 1976506 1977097 . + 0 ID=Thaps2838;Parent=Thaps2838;rank=2 chr2 . exon 1976506 1977097 . + . ID=Thaps2838.2;Parent=Thaps2838;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 1977153 1977214 . + 0 ID=Thaps2838;Parent=Thaps2838;rank=3 chr2 . exon 1977153 1977214 . + . ID=Thaps2838.3;Parent=Thaps2838;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 1977235 1979270 . + 0 ID=Thaps2838;Parent=Thaps2838;rank=4 chr2 . exon 1977235 1979270 . + . ID=Thaps2838.4;Parent=Thaps2838;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 1970701 1971453 . + . ID=Thaps31979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVH2];external_name=Thaps31979;logic_name=jgi_thaps3 chr2 ensembl transcript 1970701 1971453 . + . ID=Thaps31979;Parent=Thaps31979;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1970701 1971453 . + 0 ID=Thaps31979;Parent=Thaps31979;rank=1 chr2 . exon 1970701 1971453 . + . ID=Thaps31979.1;Parent=Thaps31979;constitutive=1;rank=1 chr2 . repeat_region 1978845 1978863 . ? . description=dust chr2 . repeat_region 1984657 1984698 . ? . description=dust chr2 ensembl protein_coding_gene 1984266 1984655 . - . ID=Thaps21482;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVH7];external_name=Thaps21482;logic_name=jgi_thaps3 chr2 ensembl transcript 1984266 1984655 . - . ID=Thaps21482;Parent=Thaps21482;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1984266 1984655 . - 0 ID=Thaps21482;Parent=Thaps21482;rank=1 chr2 . exon 1984266 1984655 . - . ID=Thaps21482.1;Parent=Thaps21482;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1979334 1979811 . - . ID=Thaps261525;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVH5];external_name=Thaps261525;logic_name=jgi_thaps3 chr2 ensembl transcript 1979334 1979811 . - . ID=Thaps261525;Parent=Thaps261525;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1979334 1979811 . - 0 ID=Thaps261525;Parent=Thaps261525;rank=1 chr2 . exon 1979334 1979811 . - . ID=Thaps261525.1;Parent=Thaps261525;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1985295 1986805 . + . ID=Thaps261527;biotype=protein_coding;description=Rag-type gtp-binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVH8];external_name=Thaps261527;logic_name=jgi_thaps3 chr2 ensembl transcript 1985295 1986805 . + . ID=Thaps261527;Parent=Thaps261527;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1985295 1985744 . + 0 ID=Thaps261527;Parent=Thaps261527;rank=1 chr2 . exon 1985295 1985744 . + . ID=Thaps261527.1;Parent=Thaps261527;constitutive=1;rank=1 chr2 . CDS 1986023 1986280 . + 0 ID=Thaps261527;Parent=Thaps261527;rank=2 chr2 . exon 1986023 1986280 . + . ID=Thaps261527.2;Parent=Thaps261527;constitutive=1;rank=2 chr2 . CDS 1986530 1986805 . + 0 ID=Thaps261527;Parent=Thaps261527;rank=3 chr2 . exon 1986530 1986805 . + . ID=Thaps261527.3;Parent=Thaps261527;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 1981360 1982889 . - . ID=Thaps268351;biotype=protein_coding;description=Putative uncharacterized protein HBP2 [Source:UniProtKB/TrEMBL%3BAcc:B8BVH6];external_name=HBP2;logic_name=jgi_thaps3 chr2 ensembl transcript 1981360 1982889 . - . ID=Thaps268351;Parent=Thaps268351;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1981360 1982889 . - 0 ID=Thaps268351;Parent=Thaps268351;rank=1 chr2 . exon 1981360 1982889 . - . ID=Thaps268351.1;Parent=Thaps268351;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1986972 1991642 . - . ID=Thaps268352;biotype=protein_coding;description=Cation transport ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8BVH9];external_name=Thaps268352;logic_name=jgi_thaps3 chr2 ensembl transcript 1986972 1991642 . - . ID=Thaps268352;Parent=Thaps268352;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1986972 1987274 . - 0 ID=Thaps268352;Parent=Thaps268352;rank=8 chr2 . exon 1986972 1987274 . - . ID=Thaps268352.8;Parent=Thaps268352;constitutive=1;rank=8 chr2 . CDS 1987335 1987488 . - 0 ID=Thaps268352;Parent=Thaps268352;rank=7 chr2 . exon 1987335 1987488 . - . ID=Thaps268352.7;Parent=Thaps268352;constitutive=1;ensembl_end_phase=1;rank=7 chr2 . CDS 1987642 1988338 . - 0 ID=Thaps268352;Parent=Thaps268352;rank=6 chr2 . exon 1987642 1988338 . - . ID=Thaps268352.6;Parent=Thaps268352;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 1988444 1989118 . - 0 ID=Thaps268352;Parent=Thaps268352;rank=5 chr2 . CDS 1989236 1989710 . - 0 ID=Thaps268352;Parent=Thaps268352;rank=4 chr2 . CDS 1989781 1989945 . - 0 ID=Thaps268352;Parent=Thaps268352;rank=3 chr2 . CDS 1990023 1990239 . - 0 ID=Thaps268352;Parent=Thaps268352;rank=2 chr2 . CDS 1990300 1991642 . - 0 ID=Thaps268352;Parent=Thaps268352;rank=1 chr2 ensembl tRNA_gene 1997221 1997293 . - . ID=EPrTPOG00000000118;biotype=tRNA;description=tRNA-Met for anticodon CAU [Source:TRNASCAN_SE%3BAcc:tRNA-Met];external_name=tRNA-Met;logic_name=ncrna_eg chr2 ensembl transcript 1997221 1997293 . - . ID=EPrTPOT00000000118;Parent=EPrTPOG00000000118;biotype=tRNA;logic_name=ncrna_eg chr2 . exon 1997221 1997293 . - . ID=EPrTPOE00000000118;Parent=EPrTPOT00000000118;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 1988444 1989118 . - . ID=Thaps268352.5;Parent=Thaps268352;constitutive=1;rank=5 chr2 . exon 1989236 1989710 . - . ID=Thaps268352.4;Parent=Thaps268352;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . exon 1989781 1989945 . - . ID=Thaps268352.3;Parent=Thaps268352;constitutive=1;rank=3 chr2 . exon 1990023 1990239 . - . ID=Thaps268352.2;Parent=Thaps268352;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . exon 1990300 1991642 . - . ID=Thaps268352.1;Parent=Thaps268352;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 1994933 1996870 . + . ID=Thaps2844;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVI0];external_name=Thaps2844;logic_name=jgi_thaps3 chr2 ensembl transcript 1994933 1996870 . + . ID=Thaps2844;Parent=Thaps2844;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1994933 1996870 . + 0 ID=Thaps2844;Parent=Thaps2844;rank=1 chr2 . exon 1994933 1996870 . + . ID=Thaps2844.1;Parent=Thaps2844;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2001277 2002332 . - . ID=Thaps261531;biotype=protein_coding;description=Glutamate-ligase like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVI3];external_name=Thaps261531;logic_name=jgi_thaps3 chr2 ensembl transcript 2001277 2002332 . - . ID=Thaps261531;Parent=Thaps261531;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2001277 2001782 . - 0 ID=Thaps261531;Parent=Thaps261531;rank=2 chr2 . exon 2001277 2001782 . - . ID=Thaps261531.2;Parent=Thaps261531;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2001795 2002332 . - 0 ID=Thaps261531;Parent=Thaps261531;rank=1 chr2 . exon 2001795 2002332 . - . ID=Thaps261531.1;Parent=Thaps261531;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 1998425 1999039 . - . ID=Thaps2845;biotype=protein_coding;description=Fucoxanthin-chlorophyll a-c binding protein%2C plastid [Source:UniProtKB/TrEMBL%3BAcc:B8BVI1];external_name=LHCF11;logic_name=jgi_thaps3 chr2 ensembl transcript 1998425 1999039 . - . ID=Thaps2845;Parent=Thaps2845;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1998425 1999039 . - 0 ID=Thaps2845;Parent=Thaps2845;rank=1 chr2 . exon 1998425 1999039 . - . ID=Thaps2845.1;Parent=Thaps2845;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 1999415 2000552 . + . ID=Thaps2846;biotype=protein_coding;description=Glycerate dehydrogenase and hydroxypyruvate reductase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVI2];external_name=Thaps2846;logic_name=jgi_thaps3 chr2 ensembl transcript 1999415 2000552 . + . ID=Thaps2846;Parent=Thaps2846;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 1999415 1999821 . + 0 ID=Thaps2846;Parent=Thaps2846;rank=1 chr2 . exon 1999415 1999821 . + . ID=Thaps2846.1;Parent=Thaps2846;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 1999937 2000552 . + 0 ID=Thaps2846;Parent=Thaps2846;rank=2 chr2 . exon 1999937 2000552 . + . ID=Thaps2846.2;Parent=Thaps2846;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 2004327 2005110 . - . ID=Thaps2848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVI4];external_name=Thaps2848;logic_name=jgi_thaps3 chr2 ensembl transcript 2004327 2005110 . - . ID=Thaps2848;Parent=Thaps2848;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2004327 2004741 . - 0 ID=Thaps2848;Parent=Thaps2848;rank=2 chr2 . exon 2004327 2004741 . - . ID=Thaps2848.2;Parent=Thaps2848;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2005079 2005110 . - 0 ID=Thaps2848;Parent=Thaps2848;rank=1 chr2 . exon 2005079 2005110 . - . ID=Thaps2848.1;Parent=Thaps2848;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 2009152 2009178 . ? . description=trf chr2 . repeat_region 2009156 2009178 . ? . description=dust chr2 . repeat_region 2009567 2010488 . ? . description=trf chr2 ensembl protein_coding_gene 2014370 2015377 . - . ID=Thaps268354;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVI5];external_name=Thaps268354;logic_name=jgi_thaps3 chr2 ensembl transcript 2014370 2015377 . - . ID=Thaps268354;Parent=Thaps268354;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2014370 2015377 . - 0 ID=Thaps268354;Parent=Thaps268354;rank=1 chr2 . exon 2014370 2015377 . - . ID=Thaps268354.1;Parent=Thaps268354;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2017729 2019036 . + . ID=Thaps27220;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVI6];external_name=Thaps27220;logic_name=jgi_thaps3 chr2 ensembl transcript 2017729 2019036 . + . ID=Thaps27220;Parent=Thaps27220;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2017729 2017854 . + 0 ID=Thaps27220;Parent=Thaps27220;rank=1 chr2 . exon 2017729 2017854 . + . ID=Thaps27220.1;Parent=Thaps27220;constitutive=1;rank=1 chr2 . CDS 2017918 2019036 . + 0 ID=Thaps27220;Parent=Thaps27220;rank=2 chr2 . exon 2017918 2019036 . + . ID=Thaps27220.2;Parent=Thaps27220;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 2022559 2023634 . - . ID=Thaps16075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVI8];external_name=TPT6;logic_name=jgi_thaps3 chr2 ensembl transcript 2022559 2023634 . - . ID=Thaps16075;Parent=Thaps16075;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2022559 2023400 . - 0 ID=Thaps16075;Parent=Thaps16075;rank=2 chr2 . exon 2022559 2023400 . - . ID=Thaps16075.2;Parent=Thaps16075;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2023586 2023634 . - 0 ID=Thaps16075;Parent=Thaps16075;rank=1 chr2 . exon 2023586 2023634 . - . ID=Thaps16075.1;Parent=Thaps16075;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2024233 2026769 . + . ID=Thaps21488;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVI9];external_name=Thaps21488;logic_name=jgi_thaps3 chr2 ensembl transcript 2024233 2026769 . + . ID=Thaps21488;Parent=Thaps21488;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2024233 2026135 . + 0 ID=Thaps21488;Parent=Thaps21488;rank=1 chr2 . exon 2024233 2026135 . + . ID=Thaps21488.1;Parent=Thaps21488;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2026237 2026769 . + 0 ID=Thaps21488;Parent=Thaps21488;rank=2 chr2 . exon 2026237 2026769 . + . ID=Thaps21488.2;Parent=Thaps21488;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 2019960 2021267 . + . ID=Thaps2852;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVI7];external_name=Thaps2852;logic_name=jgi_thaps3 chr2 ensembl transcript 2019960 2021267 . + . ID=Thaps2852;Parent=Thaps2852;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2019960 2021267 . + 0 ID=Thaps2852;Parent=Thaps2852;rank=1 chr2 . exon 2019960 2021267 . + . ID=Thaps2852.1;Parent=Thaps2852;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2027546 2028388 . + . ID=Thaps2855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ0];external_name=Thaps2855;logic_name=jgi_thaps3 chr2 ensembl transcript 2027546 2028388 . + . ID=Thaps2855;Parent=Thaps2855;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2027546 2028388 . + 0 ID=Thaps2855;Parent=Thaps2855;rank=1 chr2 . exon 2027546 2028388 . + . ID=Thaps2855.1;Parent=Thaps2855;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2030228 2031463 . + . ID=Thaps21489;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ2];external_name=Thaps21489;logic_name=jgi_thaps3 chr2 ensembl transcript 2030228 2031463 . + . ID=Thaps21489;Parent=Thaps21489;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2030228 2031463 . + 0 ID=Thaps21489;Parent=Thaps21489;rank=1 chr2 . exon 2030228 2031463 . + . ID=Thaps21489.1;Parent=Thaps21489;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2028485 2029705 . - . ID=Thaps2856;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ1];external_name=Thaps2856;logic_name=jgi_thaps3 chr2 ensembl transcript 2028485 2029705 . - . ID=Thaps2856;Parent=Thaps2856;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2028485 2029705 . - 0 ID=Thaps2856;Parent=Thaps2856;rank=1 chr2 . exon 2028485 2029705 . - . ID=Thaps2856.1;Parent=Thaps2856;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2031717 2033544 . + . ID=Thaps32329;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ3];external_name=Thaps32329;logic_name=jgi_thaps3 chr2 ensembl transcript 2031717 2033544 . + . ID=Thaps32329;Parent=Thaps32329;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2031717 2032013 . + 0 ID=Thaps32329;Parent=Thaps32329;rank=1 chr2 . exon 2031717 2032013 . + . ID=Thaps32329.1;Parent=Thaps32329;constitutive=1;rank=1 chr2 . CDS 2032099 2033544 . + 0 ID=Thaps32329;Parent=Thaps32329;rank=2 chr2 . exon 2032099 2033544 . + . ID=Thaps32329.2;Parent=Thaps32329;constitutive=1;rank=2 chr2 . repeat_region 2041301 2041317 . ? . description=dust chr2 . repeat_region 2046609 2046636 . ? . description=trf chr2 . repeat_region 2046609 2046636 . ? . description=dust chr2 ensembl protein_coding_gene 2042668 2043607 . + . ID=Thaps21491;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ5];external_name=Thaps21491;logic_name=jgi_thaps3 chr2 ensembl transcript 2042668 2043607 . + . ID=Thaps21491;Parent=Thaps21491;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2042668 2043011 . + 0 ID=Thaps21491;Parent=Thaps21491;rank=1 chr2 . exon 2042668 2043011 . + . ID=Thaps21491.1;Parent=Thaps21491;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 2043181 2043607 . + 0 ID=Thaps21491;Parent=Thaps21491;rank=2 chr2 . exon 2043181 2043607 . + . ID=Thaps21491.2;Parent=Thaps21491;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 2043780 2044766 . - . ID=Thaps268358;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ6];external_name=Thaps268358;logic_name=jgi_thaps3 chr2 ensembl transcript 2043780 2044766 . - . ID=Thaps268358;Parent=Thaps268358;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2043780 2044214 . - 0 ID=Thaps268358;Parent=Thaps268358;rank=3 chr2 . exon 2043780 2044214 . - . ID=Thaps268358.3;Parent=Thaps268358;constitutive=1;rank=3 chr2 . CDS 2044326 2044535 . - 0 ID=Thaps268358;Parent=Thaps268358;rank=2 chr2 . exon 2044326 2044535 . - . ID=Thaps268358.2;Parent=Thaps268358;constitutive=1;rank=2 chr2 . CDS 2044608 2044766 . - 0 ID=Thaps268358;Parent=Thaps268358;rank=1 chr2 . exon 2044608 2044766 . - . ID=Thaps268358.1;Parent=Thaps268358;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2046132 2047629 . + . ID=Thaps2862;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ7];external_name=Thaps2862;logic_name=jgi_thaps3 chr2 ensembl transcript 2046132 2047629 . + . ID=Thaps2862;Parent=Thaps2862;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2046132 2046159 . + 0 ID=Thaps2862;Parent=Thaps2862;rank=1 chr2 . exon 2046132 2046159 . + . ID=Thaps2862.1;Parent=Thaps2862;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2046447 2046574 . + 0 ID=Thaps2862;Parent=Thaps2862;rank=2 chr2 . exon 2046447 2046574 . + . ID=Thaps2862.2;Parent=Thaps2862;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2046640 2046750 . + 0 ID=Thaps2862;Parent=Thaps2862;rank=3 chr2 . exon 2046640 2046750 . + . ID=Thaps2862.3;Parent=Thaps2862;constitutive=1;rank=3 chr2 . CDS 2046831 2047160 . + 0 ID=Thaps2862;Parent=Thaps2862;rank=4 chr2 . exon 2046831 2047160 . + . ID=Thaps2862.4;Parent=Thaps2862;constitutive=1;rank=4 chr2 . CDS 2047245 2047364 . + 0 ID=Thaps2862;Parent=Thaps2862;rank=5 chr2 . exon 2047245 2047364 . + . ID=Thaps2862.5;Parent=Thaps2862;constitutive=1;rank=5 chr2 . CDS 2047438 2047629 . + 0 ID=Thaps2862;Parent=Thaps2862;rank=6 chr2 . exon 2047438 2047629 . + . ID=Thaps2862.6;Parent=Thaps2862;constitutive=1;rank=6 chr2 ensembl protein_coding_gene 2041050 2042195 . + . ID=Thaps39666;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ4];external_name=Thaps39666;logic_name=jgi_thaps3 chr2 ensembl transcript 2041050 2042195 . + . ID=Thaps39666;Parent=Thaps39666;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2041050 2041212 . + 0 ID=Thaps39666;Parent=Thaps39666;rank=1 chr2 . exon 2041050 2041212 . + . ID=Thaps39666.1;Parent=Thaps39666;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2041327 2042195 . + 0 ID=Thaps39666;Parent=Thaps39666;rank=2 chr2 . exon 2041327 2042195 . + . ID=Thaps39666.2;Parent=Thaps39666;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 2049177 2050028 . - . ID=Thaps261539;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ8];external_name=Thaps261539;logic_name=jgi_thaps3 chr2 ensembl transcript 2049177 2050028 . - . ID=Thaps261539;Parent=Thaps261539;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2049177 2050028 . - 0 ID=Thaps261539;Parent=Thaps261539;rank=1 chr2 . exon 2049177 2050028 . - . ID=Thaps261539.1;Parent=Thaps261539;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2054846 2057944 . + . ID=Thaps2865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVK0];external_name=Thaps2865;logic_name=jgi_thaps3 chr2 ensembl transcript 2054846 2057944 . + . ID=Thaps2865;Parent=Thaps2865;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2054846 2055724 . + 0 ID=Thaps2865;Parent=Thaps2865;rank=1 chr2 . exon 2054846 2055724 . + . ID=Thaps2865.1;Parent=Thaps2865;constitutive=1;rank=1 chr2 . CDS 2055950 2057944 . + 0 ID=Thaps2865;Parent=Thaps2865;rank=2 chr2 . exon 2055950 2057944 . + . ID=Thaps2865.2;Parent=Thaps2865;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 2052433 2053395 . - . ID=Thaps31929;biotype=protein_coding;description=Geranylgeranyl diphosphate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BVJ9];external_name=GGPS5;logic_name=jgi_thaps3 chr2 ensembl transcript 2052433 2053395 . - . ID=Thaps31929;Parent=Thaps31929;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2052433 2053395 . - 0 ID=Thaps31929;Parent=Thaps31929;rank=1 chr2 . exon 2052433 2053395 . - . ID=Thaps31929.1;Parent=Thaps31929;constitutive=1;rank=1 chr2 . repeat_region 2062847 2062854 . ? . description=dust chr2 ensembl protein_coding_gene 2067789 2069050 . + . ID=Thaps14942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVK3];external_name=Thaps14942;logic_name=jgi_thaps3 chr2 ensembl transcript 2067789 2069050 . + . ID=Thaps14942;Parent=Thaps14942;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2067789 2068070 . + 0 ID=Thaps14942;Parent=Thaps14942;rank=1 chr2 . exon 2067789 2068070 . + . ID=Thaps14942.1;Parent=Thaps14942;constitutive=1;rank=1 chr2 . CDS 2068154 2068258 . + 0 ID=Thaps14942;Parent=Thaps14942;rank=2 chr2 . CDS 2068310 2068367 . + 0 ID=Thaps14942;Parent=Thaps14942;rank=3 chr2 . CDS 2068434 2069050 . + 0 ID=Thaps14942;Parent=Thaps14942;rank=4 chr2 ensembl protein_coding_gene 2058764 2060187 . - . ID=Thaps261541;biotype=protein_coding;description=Ribonuceoprotein [Source:UniProtKB/TrEMBL%3BAcc:B8BVK1];external_name=Thaps261541;logic_name=jgi_thaps3 chr2 ensembl transcript 2058764 2060187 . - . ID=Thaps261541;Parent=Thaps261541;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2058764 2059029 . - 0 ID=Thaps261541;Parent=Thaps261541;rank=3 chr2 . exon 2058764 2059029 . - . ID=Thaps261541.3;Parent=Thaps261541;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2059261 2059773 . - 0 ID=Thaps261541;Parent=Thaps261541;rank=2 chr2 . exon 2059261 2059773 . - . ID=Thaps261541.2;Parent=Thaps261541;constitutive=1;rank=2 chr2 . CDS 2059899 2060187 . - 0 ID=Thaps261541;Parent=Thaps261541;rank=1 chr2 . exon 2059899 2060187 . - . ID=Thaps261541.1;Parent=Thaps261541;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2061372 2061986 . - . ID=Thaps268362;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVK2];external_name=Thaps268362;logic_name=jgi_thaps3 chr2 ensembl transcript 2061372 2061986 . - . ID=Thaps268362;Parent=Thaps268362;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2061372 2061986 . - 0 ID=Thaps268362;Parent=Thaps268362;rank=1 chr2 . exon 2061372 2061986 . - . ID=Thaps268362.1;Parent=Thaps268362;constitutive=1;rank=1 chr2 . repeat_region 2076886 2076910 . ? . description=trf chr2 . exon 2068154 2068258 . + . ID=Thaps14942.2;Parent=Thaps14942;constitutive=1;rank=2 chr2 . exon 2068310 2068367 . + . ID=Thaps14942.3;Parent=Thaps14942;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . exon 2068434 2069050 . + . ID=Thaps14942.4;Parent=Thaps14942;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 2072611 2073861 . + . ID=Thaps21498;biotype=protein_coding;description=Atp-dependent RNA DEAD/DEAH box helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BVK5];external_name=Thaps21498;logic_name=jgi_thaps3 chr2 ensembl transcript 2072611 2073861 . + . ID=Thaps21498;Parent=Thaps21498;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2072611 2073861 . + 0 ID=Thaps21498;Parent=Thaps21498;rank=1 chr2 . exon 2072611 2073861 . + . ID=Thaps21498.1;Parent=Thaps21498;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2074382 2075269 . - . ID=Thaps268364;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVK6];external_name=Thaps268364;logic_name=jgi_thaps3 chr2 ensembl transcript 2074382 2075269 . - . ID=Thaps268364;Parent=Thaps268364;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2074382 2075269 . - 0 ID=Thaps268364;Parent=Thaps268364;rank=1 chr2 . exon 2074382 2075269 . - . ID=Thaps268364.1;Parent=Thaps268364;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2070937 2071491 . + . ID=Thaps32431;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVK4];external_name=Thaps32431;logic_name=jgi_thaps3 chr2 ensembl transcript 2070937 2071491 . + . ID=Thaps32431;Parent=Thaps32431;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2070937 2071491 . + 0 ID=Thaps32431;Parent=Thaps32431;rank=1 chr2 . exon 2070937 2071491 . + . ID=Thaps32431.1;Parent=Thaps32431;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2082387 2084876 . - . ID=Thaps268366;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVK8];external_name=Thaps268366;logic_name=jgi_thaps3 chr2 ensembl transcript 2082387 2084876 . - . ID=Thaps268366;Parent=Thaps268366;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2082387 2082833 . - 0 ID=Thaps268366;Parent=Thaps268366;rank=7 chr2 . exon 2082387 2082833 . - . ID=Thaps268366.7;Parent=Thaps268366;constitutive=1;rank=7 chr2 . CDS 2082920 2083076 . - 0 ID=Thaps268366;Parent=Thaps268366;rank=6 chr2 . exon 2082920 2083076 . - . ID=Thaps268366.6;Parent=Thaps268366;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 2083101 2083572 . - 0 ID=Thaps268366;Parent=Thaps268366;rank=5 chr2 . exon 2083101 2083572 . - . ID=Thaps268366.5;Parent=Thaps268366;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 2083753 2083855 . - 0 ID=Thaps268366;Parent=Thaps268366;rank=4 chr2 . exon 2083753 2083855 . - . ID=Thaps268366.4;Parent=Thaps268366;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 2084145 2084353 . - 0 ID=Thaps268366;Parent=Thaps268366;rank=3 chr2 . exon 2084145 2084353 . - . ID=Thaps268366.3;Parent=Thaps268366;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2084441 2084566 . - 0 ID=Thaps268366;Parent=Thaps268366;rank=2 chr2 . exon 2084441 2084566 . - . ID=Thaps268366.2;Parent=Thaps268366;constitutive=1;rank=2 chr2 . CDS 2084678 2084876 . - 0 ID=Thaps268366;Parent=Thaps268366;rank=1 chr2 . exon 2084678 2084876 . - . ID=Thaps268366.1;Parent=Thaps268366;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2081628 2082296 . + . ID=Thaps27236;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVK7];external_name=Thaps27236;logic_name=jgi_thaps3 chr2 ensembl transcript 2081628 2082296 . + . ID=Thaps27236;Parent=Thaps27236;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2081628 2081654 . + 0 ID=Thaps27236;Parent=Thaps27236;rank=1 chr2 . exon 2081628 2081654 . + . ID=Thaps27236.1;Parent=Thaps27236;constitutive=1;rank=1 chr2 . CDS 2081727 2082296 . + 0 ID=Thaps27236;Parent=Thaps27236;rank=2 chr2 . exon 2081727 2082296 . + . ID=Thaps27236.2;Parent=Thaps27236;constitutive=1;rank=2 chr2 . repeat_region 2097897 2097935 . ? . description=dust chr2 ensembl protein_coding_gene 2092039 2093676 . - . ID=Thaps261548;biotype=protein_coding;description=Presenilin [Source:UniProtKB/TrEMBL%3BAcc:B8BVL0];external_name=Thaps261548;logic_name=jgi_thaps3 chr2 ensembl transcript 2092039 2093676 . - . ID=Thaps261548;Parent=Thaps261548;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2092039 2092250 . - 0 ID=Thaps261548;Parent=Thaps261548;rank=3 chr2 . exon 2092039 2092250 . - . ID=Thaps261548.3;Parent=Thaps261548;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2092339 2092366 . - 0 ID=Thaps261548;Parent=Thaps261548;rank=2 chr2 . exon 2092339 2092366 . - . ID=Thaps261548.2;Parent=Thaps261548;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2092799 2093676 . - 0 ID=Thaps261548;Parent=Thaps261548;rank=1 chr2 . exon 2092799 2093676 . - . ID=Thaps261548.1;Parent=Thaps261548;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2090181 2091086 . - . ID=Thaps2874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVK9];external_name=Thaps2874;logic_name=jgi_thaps3 chr2 ensembl transcript 2090181 2091086 . - . ID=Thaps2874;Parent=Thaps2874;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2090181 2091086 . - 0 ID=Thaps2874;Parent=Thaps2874;rank=1 chr2 . exon 2090181 2091086 . - . ID=Thaps2874.1;Parent=Thaps2874;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2094764 2095255 . - . ID=Thaps39677;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVL1];external_name=Thaps39677;logic_name=jgi_thaps3 chr2 ensembl transcript 2094764 2095255 . - . ID=Thaps39677;Parent=Thaps39677;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2094764 2095255 . - 0 ID=Thaps39677;Parent=Thaps39677;rank=1 chr2 . exon 2094764 2095255 . - . ID=Thaps39677.1;Parent=Thaps39677;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2099674 2100647 . + . ID=Thaps261550;biotype=protein_coding;description=Glycotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BVL3];external_name=Thaps261550;logic_name=jgi_thaps3 chr2 ensembl transcript 2099674 2100647 . + . ID=Thaps261550;Parent=Thaps261550;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2099674 2099859 . + 0 ID=Thaps261550;Parent=Thaps261550;rank=1 chr2 . exon 2099674 2099859 . + . ID=Thaps261550.1;Parent=Thaps261550;constitutive=1;rank=1 chr2 . CDS 2099962 2100303 . + 0 ID=Thaps261550;Parent=Thaps261550;rank=2 chr2 . exon 2099962 2100303 . + . ID=Thaps261550.2;Parent=Thaps261550;constitutive=1;rank=2 chr2 . CDS 2100322 2100419 . + 0 ID=Thaps261550;Parent=Thaps261550;rank=3 chr2 . exon 2100322 2100419 . + . ID=Thaps261550.3;Parent=Thaps261550;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2100518 2100647 . + 0 ID=Thaps261550;Parent=Thaps261550;rank=4 chr2 . exon 2100518 2100647 . + . ID=Thaps261550.4;Parent=Thaps261550;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 2105163 2105837 . - . ID=Thaps268368;biotype=protein_coding;description=Putative uncharacterized protein HSF8 [Source:UniProtKB/TrEMBL%3BAcc:B8BVL4];external_name=HSF8;logic_name=jgi_thaps3 chr2 ensembl transcript 2105163 2105837 . - . ID=Thaps268368;Parent=Thaps268368;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2105163 2105659 . - 0 ID=Thaps268368;Parent=Thaps268368;rank=2 chr2 . exon 2105163 2105659 . - . ID=Thaps268368.2;Parent=Thaps268368;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2105765 2105837 . - 0 ID=Thaps268368;Parent=Thaps268368;rank=1 chr2 . exon 2105765 2105837 . - . ID=Thaps268368.1;Parent=Thaps268368;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2098106 2098642 . + . ID=Thaps2877;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVL2];external_name=Thaps2877;logic_name=jgi_thaps3 chr2 ensembl transcript 2098106 2098642 . + . ID=Thaps2877;Parent=Thaps2877;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2098106 2098642 . + 0 ID=Thaps2877;Parent=Thaps2877;rank=1 chr2 . exon 2098106 2098642 . + . ID=Thaps2877.1;Parent=Thaps2877;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2106082 2107795 . - . ID=Thaps32485;biotype=protein_coding;description=Proline dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BVL5];external_name=Thaps32485;logic_name=jgi_thaps3 chr2 ensembl transcript 2106082 2107795 . - . ID=Thaps32485;Parent=Thaps32485;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2106082 2107506 . - 0 ID=Thaps32485;Parent=Thaps32485;rank=2 chr2 . exon 2106082 2107506 . - . ID=Thaps32485.2;Parent=Thaps32485;constitutive=1;rank=2 chr2 . CDS 2107601 2107795 . - 0 ID=Thaps32485;Parent=Thaps32485;rank=1 chr2 . exon 2107601 2107795 . - . ID=Thaps32485.1;Parent=Thaps32485;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2113782 2117533 . - . ID=Thaps12441;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVL8];external_name=Thaps12441;logic_name=jgi_thaps3 chr2 ensembl transcript 2113782 2117533 . - . ID=Thaps12441;Parent=Thaps12441;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2113782 2114208 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=10 chr2 . exon 2113782 2114208 . - . ID=Thaps12441.10;Parent=Thaps12441;constitutive=1;ensembl_end_phase=1;rank=10 chr2 . CDS 2114236 2114425 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=9 chr2 . exon 2114236 2114425 . - . ID=Thaps12441.9;Parent=Thaps12441;constitutive=1;ensembl_end_phase=1;rank=9 chr2 . CDS 2114498 2114828 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=8 chr2 . exon 2114498 2114828 . - . ID=Thaps12441.8;Parent=Thaps12441;constitutive=1;ensembl_end_phase=1;rank=8 chr2 . CDS 2115042 2115706 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=7 chr2 . exon 2115042 2115706 . - . ID=Thaps12441.7;Parent=Thaps12441;constitutive=1;ensembl_end_phase=2;rank=7 chr2 . CDS 2115788 2115886 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=6 chr2 . exon 2115788 2115886 . - . ID=Thaps12441.6;Parent=Thaps12441;constitutive=1;rank=6 chr2 . CDS 2116199 2116338 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=5 chr2 . exon 2116199 2116338 . - . ID=Thaps12441.5;Parent=Thaps12441;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 2116421 2116540 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=4 chr2 . exon 2116421 2116540 . - . ID=Thaps12441.4;Parent=Thaps12441;constitutive=1;rank=4 chr2 . CDS 2116620 2116758 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=3 chr2 . exon 2116620 2116758 . - . ID=Thaps12441.3;Parent=Thaps12441;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2116840 2117104 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=2 chr2 . exon 2116840 2117104 . - . ID=Thaps12441.2;Parent=Thaps12441;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2117171 2117533 . - 0 ID=Thaps12441;Parent=Thaps12441;rank=1 chr2 . exon 2117171 2117533 . - . ID=Thaps12441.1;Parent=Thaps12441;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2109743 2112145 . + . ID=Thaps21504;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVL7];external_name=Thaps21504;logic_name=jgi_thaps3 chr2 ensembl transcript 2109743 2112145 . + . ID=Thaps21504;Parent=Thaps21504;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2109743 2110249 . + 0 ID=Thaps21504;Parent=Thaps21504;rank=1 chr2 . exon 2109743 2110249 . + . ID=Thaps21504.1;Parent=Thaps21504;constitutive=1;rank=1 chr2 . CDS 2110346 2110484 . + 0 ID=Thaps21504;Parent=Thaps21504;rank=2 chr2 . exon 2110346 2110484 . + . ID=Thaps21504.2;Parent=Thaps21504;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2110717 2110898 . + 0 ID=Thaps21504;Parent=Thaps21504;rank=3 chr2 . exon 2110717 2110898 . + . ID=Thaps21504.3;Parent=Thaps21504;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2110973 2112145 . + 0 ID=Thaps21504;Parent=Thaps21504;rank=4 chr2 . exon 2110973 2112145 . + . ID=Thaps21504.4;Parent=Thaps21504;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 2108627 2109538 . + . ID=Thaps2880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVL6];external_name=Thaps2880;logic_name=jgi_thaps3 chr2 ensembl transcript 2108627 2109538 . + . ID=Thaps2880;Parent=Thaps2880;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2108627 2109538 . + 0 ID=Thaps2880;Parent=Thaps2880;rank=1 chr2 . exon 2108627 2109538 . + . ID=Thaps2880.1;Parent=Thaps2880;constitutive=1;rank=1 chr2 . repeat_region 2119487 2119494 . ? . description=dust chr2 . repeat_region 2121034 2121041 . ? . description=dust chr2 ensembl protein_coding_gene 2123371 2124506 . + . ID=Thaps2885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVM0];external_name=Thaps2885;logic_name=jgi_thaps3 chr2 ensembl transcript 2123371 2124506 . + . ID=Thaps2885;Parent=Thaps2885;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2123371 2124077 . + 0 ID=Thaps2885;Parent=Thaps2885;rank=1 chr2 . exon 2123371 2124077 . + . ID=Thaps2885.1;Parent=Thaps2885;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 2124149 2124506 . + 0 ID=Thaps2885;Parent=Thaps2885;rank=2 chr2 . exon 2124149 2124506 . + . ID=Thaps2885.2;Parent=Thaps2885;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 2124569 2126291 . - . ID=Thaps2886;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVM1];external_name=Thaps2886;logic_name=jgi_thaps3 chr2 ensembl transcript 2124569 2126291 . - . ID=Thaps2886;Parent=Thaps2886;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2124569 2125596 . - 0 ID=Thaps2886;Parent=Thaps2886;rank=2 chr2 . exon 2124569 2125596 . - . ID=Thaps2886.2;Parent=Thaps2886;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2125688 2126291 . - 0 ID=Thaps2886;Parent=Thaps2886;rank=1 chr2 . exon 2125688 2126291 . - . ID=Thaps2886.1;Parent=Thaps2886;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2120059 2120517 . + . ID=Thaps32154;biotype=protein_coding;description=Probable mitochondrial translation initiation factor [Source:UniProtKB/TrEMBL%3BAcc:B8BVL9];external_name=INFC;logic_name=jgi_thaps3 chr2 ensembl transcript 2120059 2120517 . + . ID=Thaps32154;Parent=Thaps32154;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2120059 2120517 . + 0 ID=Thaps32154;Parent=Thaps32154;rank=1 chr2 . exon 2120059 2120517 . + . ID=Thaps32154.1;Parent=Thaps32154;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2133843 2135753 . + . ID=Thaps14140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVM3];external_name=Thaps14140;logic_name=jgi_thaps3 chr2 ensembl transcript 2133843 2135753 . + . ID=Thaps14140;Parent=Thaps14140;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2133843 2134296 . + 0 ID=Thaps14140;Parent=Thaps14140;rank=1 chr2 . exon 2133843 2134296 . + . ID=Thaps14140.1;Parent=Thaps14140;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2134514 2134635 . + 0 ID=Thaps14140;Parent=Thaps14140;rank=2 chr2 . exon 2134514 2134635 . + . ID=Thaps14140.2;Parent=Thaps14140;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2134705 2134948 . + 0 ID=Thaps14140;Parent=Thaps14140;rank=3 chr2 . exon 2134705 2134948 . + . ID=Thaps14140.3;Parent=Thaps14140;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2135117 2135524 . + 0 ID=Thaps14140;Parent=Thaps14140;rank=4 chr2 . exon 2135117 2135524 . + . ID=Thaps14140.4;Parent=Thaps14140;constitutive=1;rank=4 chr2 . CDS 2135611 2135753 . + 0 ID=Thaps14140;Parent=Thaps14140;rank=5 chr2 . exon 2135611 2135753 . + . ID=Thaps14140.5;Parent=Thaps14140;constitutive=1;ensembl_end_phase=2;rank=5 chr2 ensembl protein_coding_gene 2137620 2138912 . - . ID=Thaps261556;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVM4];external_name=Thaps261556;logic_name=jgi_thaps3 chr2 ensembl transcript 2137620 2138912 . - . ID=Thaps261556;Parent=Thaps261556;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2137620 2137759 . - 0 ID=Thaps261556;Parent=Thaps261556;rank=3 chr2 . exon 2137620 2137759 . - . ID=Thaps261556.3;Parent=Thaps261556;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2138021 2138242 . - 0 ID=Thaps261556;Parent=Thaps261556;rank=2 chr2 . CDS 2138318 2138912 . - 0 ID=Thaps261556;Parent=Thaps261556;rank=1 chr2 ensembl protein_coding_gene 2130934 2132783 . + . ID=Thaps31930;biotype=protein_coding;description=Metalloprotease [Source:UniProtKB/TrEMBL%3BAcc:B8BVM2];external_name=FTSH;logic_name=jgi_thaps3 chr2 ensembl transcript 2130934 2132783 . + . ID=Thaps31930;Parent=Thaps31930;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2130934 2131456 . + 0 ID=Thaps31930;Parent=Thaps31930;rank=1 chr2 . exon 2130934 2131456 . + . ID=Thaps31930.1;Parent=Thaps31930;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2131564 2132783 . + 0 ID=Thaps31930;Parent=Thaps31930;rank=2 chr2 . exon 2131564 2132783 . + . ID=Thaps31930.2;Parent=Thaps31930;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 2143507 2146836 . + . ID=Thaps21507;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVM6];external_name=Thaps21507;logic_name=jgi_thaps3 chr2 ensembl transcript 2143507 2146836 . + . ID=Thaps21507;Parent=Thaps21507;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2143507 2145393 . + 0 ID=Thaps21507;Parent=Thaps21507;rank=1 chr2 . exon 2143507 2145393 . + . ID=Thaps21507.1;Parent=Thaps21507;constitutive=1;rank=1 chr2 . CDS 2145476 2145940 . + 0 ID=Thaps21507;Parent=Thaps21507;rank=2 chr2 . exon 2145476 2145940 . + . ID=Thaps21507.2;Parent=Thaps21507;constitutive=1;rank=2 chr2 . CDS 2146009 2146836 . + 0 ID=Thaps21507;Parent=Thaps21507;rank=3 chr2 . exon 2146009 2146836 . + . ID=Thaps21507.3;Parent=Thaps21507;constitutive=1;rank=3 chr2 . exon 2138021 2138242 . - . ID=Thaps261556.2;Parent=Thaps261556;constitutive=1;rank=2 chr2 . exon 2138318 2138912 . - . ID=Thaps261556.1;Parent=Thaps261556;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2142005 2142448 . - . ID=Thaps2890;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVM5];external_name=Thaps2890;logic_name=jgi_thaps3 chr2 ensembl transcript 2142005 2142448 . - . ID=Thaps2890;Parent=Thaps2890;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2142005 2142448 . - 0 ID=Thaps2890;Parent=Thaps2890;rank=1 chr2 . exon 2142005 2142448 . - . ID=Thaps2890.1;Parent=Thaps2890;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2147207 2148286 . + . ID=Thaps2892;biotype=protein_coding;description=Elongation factor Ts 1%2C mitochondrial [Source:UniProtKB/Swiss-Prot%3BAcc:B8BVM7];external_name=Thaps2892;logic_name=jgi_thaps3 chr2 ensembl transcript 2147207 2148286 . + . ID=Thaps2892;Parent=Thaps2892;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2147207 2148286 . + 0 ID=Thaps2892;Parent=Thaps2892;rank=1 chr2 . exon 2147207 2148286 . + . ID=Thaps2892.1;Parent=Thaps2892;constitutive=1;rank=1 chr2 . repeat_region 2157324 2157399 . ? . description=trf chr2 ensembl protein_coding_gene 2150398 2151716 . + . ID=Thaps268372;biotype=protein_coding;description=Ribosomal protein L19 [Source:UniProtKB/TrEMBL%3BAcc:B8BVM9];external_name=RL19;logic_name=jgi_thaps3 chr2 ensembl transcript 2150398 2151716 . + . ID=Thaps268372;Parent=Thaps268372;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2150398 2150401 . + 0 ID=Thaps268372;Parent=Thaps268372;rank=1 chr2 . exon 2150398 2150401 . + . ID=Thaps268372.1;Parent=Thaps268372;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2150766 2150990 . + 0 ID=Thaps268372;Parent=Thaps268372;rank=2 chr2 . exon 2150766 2150990 . + . ID=Thaps268372.2;Parent=Thaps268372;constitutive=1;rank=2 chr2 . CDS 2151391 2151716 . + 0 ID=Thaps268372;Parent=Thaps268372;rank=3 chr2 . exon 2151391 2151716 . + . ID=Thaps268372.3;Parent=Thaps268372;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 2154501 2156474 . + . ID=Thaps268373;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVN1];external_name=Thaps268373;logic_name=jgi_thaps3 chr2 ensembl transcript 2154501 2156474 . + . ID=Thaps268373;Parent=Thaps268373;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2154501 2156474 . + 0 ID=Thaps268373;Parent=Thaps268373;rank=1 chr2 . exon 2154501 2156474 . + . ID=Thaps268373.1;Parent=Thaps268373;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2148443 2149399 . - . ID=Thaps2893;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVM8];external_name=Thaps2893;logic_name=jgi_thaps3 chr2 ensembl transcript 2148443 2149399 . - . ID=Thaps2893;Parent=Thaps2893;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2148443 2148711 . - 0 ID=Thaps2893;Parent=Thaps2893;rank=2 chr2 . exon 2148443 2148711 . - . ID=Thaps2893.2;Parent=Thaps2893;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2148799 2149399 . - 0 ID=Thaps2893;Parent=Thaps2893;rank=1 chr2 . exon 2148799 2149399 . - . ID=Thaps2893.1;Parent=Thaps2893;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2151990 2153287 . - . ID=Thaps2895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVN0];external_name=Thaps2895;logic_name=jgi_thaps3 chr2 ensembl transcript 2151990 2153287 . - . ID=Thaps2895;Parent=Thaps2895;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2151990 2152730 . - 0 ID=Thaps2895;Parent=Thaps2895;rank=3 chr2 . exon 2151990 2152730 . - . ID=Thaps2895.3;Parent=Thaps2895;constitutive=1;rank=3 chr2 . CDS 2152830 2152863 . - 0 ID=Thaps2895;Parent=Thaps2895;rank=2 chr2 . exon 2152830 2152863 . - . ID=Thaps2895.2;Parent=Thaps2895;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2152968 2153287 . - 0 ID=Thaps2895;Parent=Thaps2895;rank=1 chr2 . exon 2152968 2153287 . - . ID=Thaps2895.1;Parent=Thaps2895;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2156680 2160380 . - . ID=Thaps2897;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVN2];external_name=Thaps2897;logic_name=jgi_thaps3 chr2 ensembl transcript 2156680 2160380 . - . ID=Thaps2897;Parent=Thaps2897;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2156680 2158175 . - 0 ID=Thaps2897;Parent=Thaps2897;rank=4 chr2 . exon 2156680 2158175 . - . ID=Thaps2897.4;Parent=Thaps2897;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2158249 2159121 . - 0 ID=Thaps2897;Parent=Thaps2897;rank=3 chr2 . CDS 2159221 2159736 . - 0 ID=Thaps2897;Parent=Thaps2897;rank=2 chr2 . CDS 2159789 2160380 . - 0 ID=Thaps2897;Parent=Thaps2897;rank=1 chr2 . repeat_region 2161138 2161191 . ? . description=dust chr2 . repeat_region 2161492 2161547 . ? . description=dust chr2 . repeat_region 2164100 2164108 . ? . description=dust chr2 ensembl protein_coding_gene 2164455 2165582 . + . ID=Thaps268374;biotype=protein_coding;description=Pyruvate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BVN4];external_name=PDHA1;logic_name=jgi_thaps3 chr2 ensembl transcript 2164455 2165582 . + . ID=Thaps268374;Parent=Thaps268374;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2164455 2165582 . + 0 ID=Thaps268374;Parent=Thaps268374;rank=1 chr2 . exon 2164455 2165582 . + . ID=Thaps268374.1;Parent=Thaps268374;constitutive=1;rank=1 chr2 . exon 2158249 2159121 . - . ID=Thaps2897.3;Parent=Thaps2897;constitutive=1;rank=3 chr2 . exon 2159221 2159736 . - . ID=Thaps2897.2;Parent=Thaps2897;constitutive=1;rank=2 chr2 . exon 2159789 2160380 . - . ID=Thaps2897.1;Parent=Thaps2897;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2161257 2163138 . + . ID=Thaps31810;biotype=protein_coding;description=Pyruvate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BVN3];external_name=Thaps31810;logic_name=jgi_thaps3 chr2 ensembl transcript 2161257 2163138 . + . ID=Thaps31810;Parent=Thaps31810;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2161257 2161358 . + 0 ID=Thaps31810;Parent=Thaps31810;rank=1 chr2 . exon 2161257 2161358 . + . ID=Thaps31810.1;Parent=Thaps31810;constitutive=1;rank=1 chr2 . CDS 2161551 2162327 . + 0 ID=Thaps31810;Parent=Thaps31810;rank=2 chr2 . exon 2161551 2162327 . + . ID=Thaps31810.2;Parent=Thaps31810;constitutive=1;rank=2 chr2 . CDS 2162472 2162831 . + 0 ID=Thaps31810;Parent=Thaps31810;rank=3 chr2 . exon 2162472 2162831 . + . ID=Thaps31810.3;Parent=Thaps31810;constitutive=1;rank=3 chr2 . CDS 2162917 2163138 . + 0 ID=Thaps31810;Parent=Thaps31810;rank=4 chr2 . exon 2162917 2163138 . + . ID=Thaps31810.4;Parent=Thaps31810;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 2166613 2168937 . + . ID=Thaps39696;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVN5];external_name=Thaps39696;logic_name=jgi_thaps3 chr2 ensembl transcript 2166613 2168937 . + . ID=Thaps39696;Parent=Thaps39696;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2166613 2166741 . + 0 ID=Thaps39696;Parent=Thaps39696;rank=1 chr2 . exon 2166613 2166741 . + . ID=Thaps39696.1;Parent=Thaps39696;constitutive=1;rank=1 chr2 . CDS 2166832 2167460 . + 0 ID=Thaps39696;Parent=Thaps39696;rank=2 chr2 . exon 2166832 2167460 . + . ID=Thaps39696.2;Parent=Thaps39696;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2167553 2168004 . + 0 ID=Thaps39696;Parent=Thaps39696;rank=3 chr2 . exon 2167553 2168004 . + . ID=Thaps39696.3;Parent=Thaps39696;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2168100 2168316 . + 0 ID=Thaps39696;Parent=Thaps39696;rank=4 chr2 . CDS 2168397 2168602 . + 0 ID=Thaps39696;Parent=Thaps39696;rank=5 chr2 . CDS 2168702 2168937 . + 0 ID=Thaps39696;Parent=Thaps39696;rank=6 chr2 ensembl protein_coding_gene 2169904 2171606 . + . ID=Thaps21513;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVN6];external_name=Thaps21513;logic_name=jgi_thaps3 chr2 ensembl transcript 2169904 2171606 . + . ID=Thaps21513;Parent=Thaps21513;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2169904 2170133 . + 0 ID=Thaps21513;Parent=Thaps21513;rank=1 chr2 . exon 2169904 2170133 . + . ID=Thaps21513.1;Parent=Thaps21513;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 2170399 2170606 . + 0 ID=Thaps21513;Parent=Thaps21513;rank=2 chr2 . exon 2170399 2170606 . + . ID=Thaps21513.2;Parent=Thaps21513;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2170695 2171606 . + 0 ID=Thaps21513;Parent=Thaps21513;rank=3 chr2 . exon 2170695 2171606 . + . ID=Thaps21513.3;Parent=Thaps21513;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 2175453 2178080 . - . ID=Thaps21515;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVN9];external_name=Thaps21515;logic_name=jgi_thaps3 chr2 ensembl transcript 2175453 2178080 . - . ID=Thaps21515;Parent=Thaps21515;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2175453 2176038 . - 0 ID=Thaps21515;Parent=Thaps21515;rank=8 chr2 . exon 2175453 2176038 . - . ID=Thaps21515.8;Parent=Thaps21515;constitutive=1;ensembl_end_phase=1;rank=8 chr2 . CDS 2176122 2176295 . - 0 ID=Thaps21515;Parent=Thaps21515;rank=7 chr2 . exon 2176122 2176295 . - . ID=Thaps21515.7;Parent=Thaps21515;constitutive=1;rank=7 chr2 . CDS 2176381 2176724 . - 0 ID=Thaps21515;Parent=Thaps21515;rank=6 chr2 . exon 2176381 2176724 . - . ID=Thaps21515.6;Parent=Thaps21515;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 2176820 2177110 . - 0 ID=Thaps21515;Parent=Thaps21515;rank=5 chr2 . exon 2176820 2177110 . - . ID=Thaps21515.5;Parent=Thaps21515;constitutive=1;rank=5 chr2 . CDS 2177193 2177480 . - 0 ID=Thaps21515;Parent=Thaps21515;rank=4 chr2 . exon 2177193 2177480 . - . ID=Thaps21515.4;Parent=Thaps21515;constitutive=1;rank=4 chr2 . CDS 2177554 2177752 . - 0 ID=Thaps21515;Parent=Thaps21515;rank=3 chr2 . exon 2177554 2177752 . - . ID=Thaps21515.3;Parent=Thaps21515;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2177872 2177937 . - 0 ID=Thaps21515;Parent=Thaps21515;rank=2 chr2 . CDS 2178016 2178080 . - 0 ID=Thaps21515;Parent=Thaps21515;rank=1 chr2 ensembl protein_coding_gene 2173408 2174748 . + . ID=Thaps26136;biotype=protein_coding;description=Probable RabGDI [Source:UniProtKB/TrEMBL%3BAcc:B8BVN8];external_name=Thaps26136;logic_name=jgi_thaps3 chr2 ensembl transcript 2173408 2174748 . + . ID=Thaps26136;Parent=Thaps26136;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2173408 2174748 . + 0 ID=Thaps26136;Parent=Thaps26136;rank=1 chr2 . exon 2173408 2174748 . + . ID=Thaps26136.1;Parent=Thaps26136;constitutive=1;rank=1 chr2 . exon 2168100 2168316 . + . ID=Thaps39696.4;Parent=Thaps39696;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . exon 2168397 2168602 . + . ID=Thaps39696.5;Parent=Thaps39696;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . exon 2168702 2168937 . + . ID=Thaps39696.6;Parent=Thaps39696;constitutive=1;ensembl_end_phase=2;rank=6 chr2 ensembl protein_coding_gene 2171933 2172292 . + . ID=Thaps39698;biotype=protein_coding;description=DNA-directed RNA polymerase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BVN7];external_name=Thaps39698;logic_name=jgi_thaps3 chr2 ensembl transcript 2171933 2172292 . + . ID=Thaps39698;Parent=Thaps39698;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2171933 2172292 . + 0 ID=Thaps39698;Parent=Thaps39698;rank=1 chr2 . exon 2171933 2172292 . + . ID=Thaps39698.1;Parent=Thaps39698;constitutive=1;rank=1 chr2 . repeat_region 2178860 2178903 . ? . description=dust chr2 . repeat_region 2178877 2178903 . ? . description=trf chr2 . repeat_region 2179221 2179229 . ? . description=dust chr2 . repeat_region 2186225 2186233 . ? . description=dust chr2 . repeat_region 2187061 2187224 . ? . description=trf chr2 ensembl tRNA_gene 2179232 2179304 . - . ID=EPrTPOG00000000103;biotype=tRNA;description=tRNA-Asn for anticodon GUU [Source:TRNASCAN_SE%3BAcc:tRNA-Asn];external_name=tRNA-Asn;logic_name=ncrna_eg chr2 ensembl transcript 2179232 2179304 . - . ID=EPrTPOT00000000103;Parent=EPrTPOG00000000103;biotype=tRNA;logic_name=ncrna_eg chr2 . exon 2179232 2179304 . - . ID=EPrTPOE00000000103;Parent=EPrTPOT00000000103;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . exon 2177872 2177937 . - . ID=Thaps21515.2;Parent=Thaps21515;constitutive=1;rank=2 chr2 . exon 2178016 2178080 . - . ID=Thaps21515.1;Parent=Thaps21515;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2179429 2181147 . + . ID=Thaps21516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP0];external_name=Thaps21516;logic_name=jgi_thaps3 chr2 ensembl transcript 2179429 2181147 . + . ID=Thaps21516;Parent=Thaps21516;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2179429 2181147 . + 0 ID=Thaps21516;Parent=Thaps21516;rank=1 chr2 . exon 2179429 2181147 . + . ID=Thaps21516.1;Parent=Thaps21516;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2181441 2183793 . - . ID=Thaps21517;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP1];external_name=Thaps21517;logic_name=jgi_thaps3 chr2 ensembl transcript 2181441 2183793 . - . ID=Thaps21517;Parent=Thaps21517;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2181441 2181771 . - 0 ID=Thaps21517;Parent=Thaps21517;rank=7 chr2 . exon 2181441 2181771 . - . ID=Thaps21517.7;Parent=Thaps21517;constitutive=1;ensembl_end_phase=1;rank=7 chr2 . CDS 2181853 2181928 . - 0 ID=Thaps21517;Parent=Thaps21517;rank=6 chr2 . exon 2181853 2181928 . - . ID=Thaps21517.6;Parent=Thaps21517;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 2182015 2182114 . - 0 ID=Thaps21517;Parent=Thaps21517;rank=5 chr2 . exon 2182015 2182114 . - . ID=Thaps21517.5;Parent=Thaps21517;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 2182274 2182705 . - 0 ID=Thaps21517;Parent=Thaps21517;rank=4 chr2 . exon 2182274 2182705 . - . ID=Thaps21517.4;Parent=Thaps21517;constitutive=1;rank=4 chr2 . CDS 2182914 2183333 . - 0 ID=Thaps21517;Parent=Thaps21517;rank=3 chr2 . exon 2182914 2183333 . - . ID=Thaps21517.3;Parent=Thaps21517;constitutive=1;rank=3 chr2 . CDS 2183358 2183472 . - 0 ID=Thaps21517;Parent=Thaps21517;rank=2 chr2 . exon 2183358 2183472 . - . ID=Thaps21517.2;Parent=Thaps21517;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2183642 2183793 . - 0 ID=Thaps21517;Parent=Thaps21517;rank=1 chr2 . exon 2183642 2183793 . - . ID=Thaps21517.1;Parent=Thaps21517;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2186327 2187029 . - . ID=Thaps261566;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP3];external_name=Thaps261566;logic_name=jgi_thaps3 chr2 ensembl transcript 2186327 2187029 . - . ID=Thaps261566;Parent=Thaps261566;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2186327 2186548 . - 0 ID=Thaps261566;Parent=Thaps261566;rank=2 chr2 . exon 2186327 2186548 . - . ID=Thaps261566.2;Parent=Thaps261566;constitutive=1;rank=2 chr2 . CDS 2186643 2187029 . - 0 ID=Thaps261566;Parent=Thaps261566;rank=1 chr2 . exon 2186643 2187029 . - . ID=Thaps261566.1;Parent=Thaps261566;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2184748 2186122 . + . ID=Thaps2906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP2];external_name=Thaps2906;logic_name=jgi_thaps3 chr2 ensembl transcript 2184748 2186122 . + . ID=Thaps2906;Parent=Thaps2906;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2184748 2184796 . + 0 ID=Thaps2906;Parent=Thaps2906;rank=1 chr2 . exon 2184748 2184796 . + . ID=Thaps2906.1;Parent=Thaps2906;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2184965 2186074 . + 0 ID=Thaps2906;Parent=Thaps2906;rank=2 chr2 . exon 2184965 2186074 . + . ID=Thaps2906.2;Parent=Thaps2906;constitutive=1;rank=2 chr2 . CDS 2186106 2186122 . + 0 ID=Thaps2906;Parent=Thaps2906;rank=3 chr2 . exon 2186106 2186122 . + . ID=Thaps2906.3;Parent=Thaps2906;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 2188163 2189442 . + . ID=Thaps21519;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP4];external_name=Thaps21519;logic_name=jgi_thaps3 chr2 ensembl transcript 2188163 2189442 . + . ID=Thaps21519;Parent=Thaps21519;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2188163 2188423 . + 0 ID=Thaps21519;Parent=Thaps21519;rank=1 chr2 . exon 2188163 2188423 . + . ID=Thaps21519.1;Parent=Thaps21519;constitutive=1;rank=1 chr2 . CDS 2188858 2188964 . + 0 ID=Thaps21519;Parent=Thaps21519;rank=2 chr2 . exon 2188858 2188964 . + . ID=Thaps21519.2;Parent=Thaps21519;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2189085 2189442 . + 0 ID=Thaps21519;Parent=Thaps21519;rank=3 chr2 . exon 2189085 2189442 . + . ID=Thaps21519.3;Parent=Thaps21519;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 2190207 2191847 . - . ID=Thaps2909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP5];external_name=Thaps2909;logic_name=jgi_thaps3 chr2 ensembl transcript 2190207 2191847 . - . ID=Thaps2909;Parent=Thaps2909;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2190207 2191394 . - 0 ID=Thaps2909;Parent=Thaps2909;rank=2 chr2 . exon 2190207 2191394 . - . ID=Thaps2909.2;Parent=Thaps2909;constitutive=1;rank=2 chr2 . CDS 2191467 2191847 . - 0 ID=Thaps2909;Parent=Thaps2909;rank=1 chr2 . exon 2191467 2191847 . - . ID=Thaps2909.1;Parent=Thaps2909;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2192658 2199038 . - . ID=Thaps2910;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP6];external_name=Thaps2910;logic_name=jgi_thaps3 chr2 ensembl transcript 2192658 2199038 . - . ID=Thaps2910;Parent=Thaps2910;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2192658 2193106 . - 0 ID=Thaps2910;Parent=Thaps2910;rank=4 chr2 . exon 2192658 2193106 . - . ID=Thaps2910.4;Parent=Thaps2910;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2193146 2197403 . - 0 ID=Thaps2910;Parent=Thaps2910;rank=3 chr2 . exon 2193146 2197403 . - . ID=Thaps2910.3;Parent=Thaps2910;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2197444 2198792 . - 0 ID=Thaps2910;Parent=Thaps2910;rank=2 chr2 . exon 2197444 2198792 . - . ID=Thaps2910.2;Parent=Thaps2910;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2198942 2199038 . - 0 ID=Thaps2910;Parent=Thaps2910;rank=1 chr2 . repeat_region 2199798 2199835 . ? . description=trf chr2 . repeat_region 2200526 2200593 . ? . description=trf chr2 ensembl protein_coding_gene 2205797 2206579 . - . ID=Thaps261567;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP9];external_name=Thaps261567;logic_name=jgi_thaps3 chr2 ensembl transcript 2205797 2206579 . - . ID=Thaps261567;Parent=Thaps261567;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2205797 2206579 . - 0 ID=Thaps261567;Parent=Thaps261567;rank=1 chr2 . exon 2205797 2206579 . - . ID=Thaps261567.1;Parent=Thaps261567;constitutive=1;rank=1 chr2 . exon 2198942 2199038 . - . ID=Thaps2910.1;Parent=Thaps2910;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2199617 2200243 . - . ID=Thaps2911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP7];external_name=Thaps2911;logic_name=jgi_thaps3 chr2 ensembl transcript 2199617 2200243 . - . ID=Thaps2911;Parent=Thaps2911;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2199617 2200243 . - 0 ID=Thaps2911;Parent=Thaps2911;rank=1 chr2 . exon 2199617 2200243 . - . ID=Thaps2911.1;Parent=Thaps2911;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2201626 2205657 . + . ID=Thaps2912;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVP8];external_name=Thaps2912;logic_name=jgi_thaps3 chr2 ensembl transcript 2201626 2205657 . + . ID=Thaps2912;Parent=Thaps2912;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2201626 2201660 . + 0 ID=Thaps2912;Parent=Thaps2912;rank=1 chr2 . exon 2201626 2201660 . + . ID=Thaps2912.1;Parent=Thaps2912;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 2201748 2205657 . + 0 ID=Thaps2912;Parent=Thaps2912;rank=2 chr2 . exon 2201748 2205657 . + . ID=Thaps2912.2;Parent=Thaps2912;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . repeat_region 2210504 2210547 . ? . description=dust chr2 . repeat_region 2210948 2210955 . ? . description=dust chr2 . repeat_region 2215218 2215230 . ? . description=dust chr2 ensembl protein_coding_gene 2211220 2211902 . + . ID=Thaps26137;biotype=protein_coding;description=RL9%2C ribosomal protein 9 [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ0];external_name=RL9;logic_name=jgi_thaps3 chr2 ensembl transcript 2211220 2211902 . + . ID=Thaps26137;Parent=Thaps26137;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2211220 2211265 . + 0 ID=Thaps26137;Parent=Thaps26137;rank=1 chr2 . exon 2211220 2211265 . + . ID=Thaps26137.1;Parent=Thaps26137;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2211391 2211902 . + 0 ID=Thaps26137;Parent=Thaps26137;rank=2 chr2 . exon 2211391 2211902 . + . ID=Thaps26137.2;Parent=Thaps26137;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 2214307 2215035 . - . ID=Thaps2916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ2];external_name=Thaps2916;logic_name=jgi_thaps3 chr2 ensembl transcript 2214307 2215035 . - . ID=Thaps2916;Parent=Thaps2916;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2214307 2214851 . - 0 ID=Thaps2916;Parent=Thaps2916;rank=2 chr2 . exon 2214307 2214851 . - . ID=Thaps2916.2;Parent=Thaps2916;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2214924 2215035 . - 0 ID=Thaps2916;Parent=Thaps2916;rank=1 chr2 . exon 2214924 2215035 . - . ID=Thaps2916.1;Parent=Thaps2916;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2215961 2216203 . + . ID=Thaps32206;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ3];external_name=Thaps32206;logic_name=jgi_thaps3 chr2 ensembl transcript 2215961 2216203 . + . ID=Thaps32206;Parent=Thaps32206;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2215961 2216203 . + 0 ID=Thaps32206;Parent=Thaps32206;rank=1 chr2 . exon 2215961 2216203 . + . ID=Thaps32206.1;Parent=Thaps32206;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2213181 2214063 . + . ID=Thaps32459;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ1];external_name=Thaps32459;logic_name=jgi_thaps3 chr2 ensembl transcript 2213181 2214063 . + . ID=Thaps32459;Parent=Thaps32459;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2213181 2213291 . + 0 ID=Thaps32459;Parent=Thaps32459;rank=1 chr2 . exon 2213181 2213291 . + . ID=Thaps32459.1;Parent=Thaps32459;constitutive=1;rank=1 chr2 . CDS 2213410 2214063 . + 0 ID=Thaps32459;Parent=Thaps32459;rank=2 chr2 . exon 2213410 2214063 . + . ID=Thaps32459.2;Parent=Thaps32459;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 2218366 2219229 . + . ID=Thaps261569;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ4];external_name=Thaps261569;logic_name=jgi_thaps3 chr2 ensembl transcript 2218366 2219229 . + . ID=Thaps261569;Parent=Thaps261569;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2218366 2218761 . + 0 ID=Thaps261569;Parent=Thaps261569;rank=1 chr2 . exon 2218366 2218761 . + . ID=Thaps261569.1;Parent=Thaps261569;constitutive=1;rank=1 chr2 . CDS 2218866 2219229 . + 0 ID=Thaps261569;Parent=Thaps261569;rank=2 chr2 . exon 2218866 2219229 . + . ID=Thaps261569.2;Parent=Thaps261569;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 2219842 2222533 . - . ID=Thaps2919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ5];external_name=Thaps2919;logic_name=jgi_thaps3 chr2 ensembl transcript 2219842 2222533 . - . ID=Thaps2919;Parent=Thaps2919;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2219842 2220061 . - 0 ID=Thaps2919;Parent=Thaps2919;rank=6 chr2 . exon 2219842 2220061 . - . ID=Thaps2919.6;Parent=Thaps2919;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 2220170 2220402 . - 0 ID=Thaps2919;Parent=Thaps2919;rank=5 chr2 . exon 2220170 2220402 . - . ID=Thaps2919.5;Parent=Thaps2919;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 2220618 2220777 . - 0 ID=Thaps2919;Parent=Thaps2919;rank=4 chr2 . exon 2220618 2220777 . - . ID=Thaps2919.4;Parent=Thaps2919;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 2220855 2221173 . - 0 ID=Thaps2919;Parent=Thaps2919;rank=3 chr2 . exon 2220855 2221173 . - . ID=Thaps2919.3;Parent=Thaps2919;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2221313 2221392 . - 0 ID=Thaps2919;Parent=Thaps2919;rank=2 chr2 . exon 2221313 2221392 . - . ID=Thaps2919.2;Parent=Thaps2919;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2221476 2222533 . - 0 ID=Thaps2919;Parent=Thaps2919;rank=1 chr2 . exon 2221476 2222533 . - . ID=Thaps2919.1;Parent=Thaps2919;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2222900 2224262 . - . ID=Thaps2920;biotype=protein_coding;description=Aspartate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ6];external_name=Thaps2920;logic_name=jgi_thaps3 chr2 ensembl transcript 2222900 2224262 . - . ID=Thaps2920;Parent=Thaps2920;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2222900 2223533 . - 0 ID=Thaps2920;Parent=Thaps2920;rank=2 chr2 . exon 2222900 2223533 . - . ID=Thaps2920.2;Parent=Thaps2920;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2223622 2224262 . - 0 ID=Thaps2920;Parent=Thaps2920;rank=1 chr2 . exon 2223622 2224262 . - . ID=Thaps2920.1;Parent=Thaps2920;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2224820 2226290 . + . ID=Thaps2921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ7];external_name=Thaps2921;logic_name=jgi_thaps3 chr2 ensembl transcript 2224820 2226290 . + . ID=Thaps2921;Parent=Thaps2921;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2224820 2225242 . + 0 ID=Thaps2921;Parent=Thaps2921;rank=1 chr2 . exon 2224820 2225242 . + . ID=Thaps2921.1;Parent=Thaps2921;constitutive=1;rank=1 chr2 . CDS 2225332 2226185 . + 0 ID=Thaps2921;Parent=Thaps2921;rank=2 chr2 . exon 2225332 2226185 . + . ID=Thaps2921.2;Parent=Thaps2921;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2226260 2226290 . + 0 ID=Thaps2921;Parent=Thaps2921;rank=3 chr2 . exon 2226260 2226290 . + . ID=Thaps2921.3;Parent=Thaps2921;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 2226359 2228127 . - . ID=Thaps2922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ8];external_name=Thaps2922;logic_name=jgi_thaps3 chr2 ensembl transcript 2226359 2228127 . - . ID=Thaps2922;Parent=Thaps2922;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2226359 2227717 . - 0 ID=Thaps2922;Parent=Thaps2922;rank=2 chr2 . exon 2226359 2227717 . - . ID=Thaps2922.2;Parent=Thaps2922;constitutive=1;rank=2 chr2 . CDS 2227807 2228127 . - 0 ID=Thaps2922;Parent=Thaps2922;rank=1 chr2 ensembl protein_coding_gene 2233970 2235226 . - . ID=Thaps14109;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVR0];external_name=Thaps14109;logic_name=jgi_thaps3 chr2 ensembl transcript 2233970 2235226 . - . ID=Thaps14109;Parent=Thaps14109;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2233970 2234356 . - 0 ID=Thaps14109;Parent=Thaps14109;rank=2 chr2 . exon 2233970 2234356 . - . ID=Thaps14109.2;Parent=Thaps14109;constitutive=1;rank=2 chr2 . CDS 2234462 2235226 . - 0 ID=Thaps14109;Parent=Thaps14109;rank=1 chr2 . exon 2234462 2235226 . - . ID=Thaps14109.1;Parent=Thaps14109;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2237050 2238516 . - . ID=Thaps21524;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVR1];external_name=Thaps21524;logic_name=jgi_thaps3 chr2 ensembl transcript 2237050 2238516 . - . ID=Thaps21524;Parent=Thaps21524;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2237050 2238516 . - 0 ID=Thaps21524;Parent=Thaps21524;rank=1 chr2 . exon 2237050 2238516 . - . ID=Thaps21524.1;Parent=Thaps21524;constitutive=1;rank=1 chr2 . exon 2227807 2228127 . - . ID=Thaps2922.1;Parent=Thaps2922;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2231057 2231981 . + . ID=Thaps2923;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVQ9];external_name=Thaps2923;logic_name=jgi_thaps3 chr2 ensembl transcript 2231057 2231981 . + . ID=Thaps2923;Parent=Thaps2923;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2231057 2231162 . + 0 ID=Thaps2923;Parent=Thaps2923;rank=1 chr2 . exon 2231057 2231162 . + . ID=Thaps2923.1;Parent=Thaps2923;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2231240 2231506 . + 0 ID=Thaps2923;Parent=Thaps2923;rank=2 chr2 . exon 2231240 2231506 . + . ID=Thaps2923.2;Parent=Thaps2923;constitutive=1;rank=2 chr2 . CDS 2231584 2231711 . + 0 ID=Thaps2923;Parent=Thaps2923;rank=3 chr2 . exon 2231584 2231711 . + . ID=Thaps2923.3;Parent=Thaps2923;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2231796 2231981 . + 0 ID=Thaps2923;Parent=Thaps2923;rank=4 chr2 . exon 2231796 2231981 . + . ID=Thaps2923.4;Parent=Thaps2923;constitutive=1;rank=4 chr2 . repeat_region 2243975 2243996 . ? . description=trf chr2 . repeat_region 2243975 2243996 . ? . description=dust chr2 ensembl protein_coding_gene 2238695 2240830 . - . ID=Thaps21525;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVR2];external_name=Thaps21525;logic_name=jgi_thaps3 chr2 ensembl transcript 2238695 2240830 . - . ID=Thaps21525;Parent=Thaps21525;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2238695 2240830 . - 0 ID=Thaps21525;Parent=Thaps21525;rank=1 chr2 . exon 2238695 2240830 . - . ID=Thaps21525.1;Parent=Thaps21525;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2241676 2242103 . + . ID=Thaps261572;biotype=protein_coding;description=Sepiapterin reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BVR3];external_name=SPR1;logic_name=jgi_thaps3 chr2 ensembl transcript 2241676 2242103 . + . ID=Thaps261572;Parent=Thaps261572;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2241676 2241727 . + 0 ID=Thaps261572;Parent=Thaps261572;rank=1 chr2 . exon 2241676 2241727 . + . ID=Thaps261572.1;Parent=Thaps261572;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2241743 2242103 . + 0 ID=Thaps261572;Parent=Thaps261572;rank=2 chr2 . exon 2241743 2242103 . + . ID=Thaps261572.2;Parent=Thaps261572;constitutive=1;ensembl_end_phase=1;rank=2 chr2 ensembl protein_coding_gene 2242135 2244567 . - . ID=Thaps2927;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVR4];external_name=Thaps2927;logic_name=jgi_thaps3 chr2 ensembl transcript 2242135 2244567 . - . ID=Thaps2927;Parent=Thaps2927;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2242135 2244567 . - 0 ID=Thaps2927;Parent=Thaps2927;rank=1 chr2 . exon 2242135 2244567 . - . ID=Thaps2927.1;Parent=Thaps2927;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2245854 2249713 . - . ID=Thaps2928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVR5];external_name=Thaps2928;logic_name=jgi_thaps3 chr2 ensembl transcript 2245854 2249713 . - . ID=Thaps2928;Parent=Thaps2928;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2245854 2247809 . - 0 ID=Thaps2928;Parent=Thaps2928;rank=8 chr2 . exon 2245854 2247809 . - . ID=Thaps2928.8;Parent=Thaps2928;constitutive=1;rank=8 chr2 . CDS 2247889 2248128 . - 0 ID=Thaps2928;Parent=Thaps2928;rank=7 chr2 . CDS 2248214 2248293 . - 0 ID=Thaps2928;Parent=Thaps2928;rank=6 chr2 . CDS 2248375 2248498 . - 0 ID=Thaps2928;Parent=Thaps2928;rank=5 chr2 . CDS 2248595 2248825 . - 0 ID=Thaps2928;Parent=Thaps2928;rank=4 chr2 . CDS 2249036 2249085 . - 0 ID=Thaps2928;Parent=Thaps2928;rank=3 chr2 . CDS 2249200 2249207 . - 0 ID=Thaps2928;Parent=Thaps2928;rank=2 chr2 . CDS 2249298 2249713 . - 0 ID=Thaps2928;Parent=Thaps2928;rank=1 chr2 ensembl protein_coding_gene 2256767 2257991 . - . ID=Thaps21527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVR8];external_name=Thaps21527;logic_name=jgi_thaps3 chr2 ensembl transcript 2256767 2257991 . - . ID=Thaps21527;Parent=Thaps21527;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2256767 2257213 . - 0 ID=Thaps21527;Parent=Thaps21527;rank=2 chr2 . exon 2256767 2257213 . - . ID=Thaps21527.2;Parent=Thaps21527;constitutive=1;rank=2 chr2 . CDS 2257545 2257991 . - 0 ID=Thaps21527;Parent=Thaps21527;rank=1 chr2 . exon 2257545 2257991 . - . ID=Thaps21527.1;Parent=Thaps21527;constitutive=1;rank=1 chr2 . exon 2247889 2248128 . - . ID=Thaps2928.7;Parent=Thaps2928;constitutive=1;rank=7 chr2 . exon 2248214 2248293 . - . ID=Thaps2928.6;Parent=Thaps2928;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . exon 2248375 2248498 . - . ID=Thaps2928.5;Parent=Thaps2928;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . exon 2248595 2248825 . - . ID=Thaps2928.4;Parent=Thaps2928;constitutive=1;rank=4 chr2 . exon 2249036 2249085 . - . ID=Thaps2928.3;Parent=Thaps2928;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . exon 2249200 2249207 . - . ID=Thaps2928.2;Parent=Thaps2928;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . exon 2249298 2249713 . - . ID=Thaps2928.1;Parent=Thaps2928;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2251100 2251939 . + . ID=Thaps31912;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BVR6];external_name=PPI1;logic_name=jgi_thaps3 chr2 ensembl transcript 2251100 2251939 . + . ID=Thaps31912;Parent=Thaps31912;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2251100 2251244 . + 0 ID=Thaps31912;Parent=Thaps31912;rank=1 chr2 . exon 2251100 2251244 . + . ID=Thaps31912.1;Parent=Thaps31912;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2251325 2251391 . + 0 ID=Thaps31912;Parent=Thaps31912;rank=2 chr2 . exon 2251325 2251391 . + . ID=Thaps31912.2;Parent=Thaps31912;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2251464 2251518 . + 0 ID=Thaps31912;Parent=Thaps31912;rank=3 chr2 . exon 2251464 2251518 . + . ID=Thaps31912.3;Parent=Thaps31912;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2251598 2251624 . + 0 ID=Thaps31912;Parent=Thaps31912;rank=4 chr2 . exon 2251598 2251624 . + . ID=Thaps31912.4;Parent=Thaps31912;constitutive=1;rank=4 chr2 . CDS 2251712 2251939 . + 0 ID=Thaps31912;Parent=Thaps31912;rank=5 chr2 . exon 2251712 2251939 . + . ID=Thaps31912.5;Parent=Thaps31912;constitutive=1;rank=5 chr2 ensembl protein_coding_gene 2253009 2254613 . + . ID=Thaps32217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVR7];external_name=Thaps32217;logic_name=jgi_thaps3 chr2 ensembl transcript 2253009 2254613 . + . ID=Thaps32217;Parent=Thaps32217;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2253009 2254373 . + 0 ID=Thaps32217;Parent=Thaps32217;rank=1 chr2 . exon 2253009 2254373 . + . ID=Thaps32217.1;Parent=Thaps32217;constitutive=1;rank=1 chr2 . CDS 2254461 2254613 . + 0 ID=Thaps32217;Parent=Thaps32217;rank=2 chr2 . exon 2254461 2254613 . + . ID=Thaps32217.2;Parent=Thaps32217;constitutive=1;rank=2 chr2 . repeat_region 2262610 2262671 . ? . description=dust chr2 . repeat_region 2263273 2263316 . ? . description=dust chr2 . repeat_region 2263274 2263308 . ? . description=trf chr2 . repeat_region 2265536 2265545 . ? . description=dust chr2 ensembl protein_coding_gene 2263909 2265224 . + . ID=Thaps261577;biotype=protein_coding;description=Putative uncharacterized protein RecA_2 [Source:UniProtKB/TrEMBL%3BAcc:B8BVS2];external_name=RECA_2;logic_name=jgi_thaps3 chr2 ensembl transcript 2263909 2265224 . + . ID=Thaps261577;Parent=Thaps261577;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2263909 2264067 . + 0 ID=Thaps261577;Parent=Thaps261577;rank=1 chr2 . exon 2263909 2264067 . + . ID=Thaps261577.1;Parent=Thaps261577;constitutive=1;rank=1 chr2 . CDS 2264314 2264529 . + 0 ID=Thaps261577;Parent=Thaps261577;rank=2 chr2 . exon 2264314 2264529 . + . ID=Thaps261577.2;Parent=Thaps261577;constitutive=1;rank=2 chr2 . CDS 2264743 2265224 . + 0 ID=Thaps261577;Parent=Thaps261577;rank=3 chr2 . exon 2264743 2265224 . + . ID=Thaps261577.3;Parent=Thaps261577;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 2263024 2263614 . - . ID=Thaps2934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVS1];external_name=Thaps2934;logic_name=jgi_thaps3 chr2 ensembl transcript 2263024 2263614 . - . ID=Thaps2934;Parent=Thaps2934;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2263024 2263614 . - 0 ID=Thaps2934;Parent=Thaps2934;rank=1 chr2 . exon 2263024 2263614 . - . ID=Thaps2934.1;Parent=Thaps2934;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2265646 2266884 . + . ID=Thaps2936;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVS3];external_name=Thaps2936;logic_name=jgi_thaps3 chr2 ensembl transcript 2265646 2266884 . + . ID=Thaps2936;Parent=Thaps2936;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2265646 2266884 . + 0 ID=Thaps2936;Parent=Thaps2936;rank=1 chr2 . exon 2265646 2266884 . + . ID=Thaps2936.1;Parent=Thaps2936;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2259874 2261506 . - . ID=Thaps31777;biotype=protein_coding;description=Probable 3-oxoacid coa-transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BVS0];external_name=OCT1;logic_name=jgi_thaps3 chr2 ensembl transcript 2259874 2261506 . - . ID=Thaps31777;Parent=Thaps31777;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2259874 2260940 . - 0 ID=Thaps31777;Parent=Thaps31777;rank=3 chr2 . exon 2259874 2260940 . - . ID=Thaps31777.3;Parent=Thaps31777;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2261020 2261143 . - 0 ID=Thaps31777;Parent=Thaps31777;rank=2 chr2 . exon 2261020 2261143 . - . ID=Thaps31777.2;Parent=Thaps31777;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2261252 2261506 . - 0 ID=Thaps31777;Parent=Thaps31777;rank=1 chr2 . exon 2261252 2261506 . - . ID=Thaps31777.1;Parent=Thaps31777;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2258491 2259280 . - . ID=Thaps32223;biotype=protein_coding;description=At-like rab-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVR9];external_name=Thaps32223;logic_name=jgi_thaps3 chr2 ensembl transcript 2258491 2259280 . - . ID=Thaps32223;Parent=Thaps32223;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2258491 2258979 . - 0 ID=Thaps32223;Parent=Thaps32223;rank=2 chr2 . exon 2258491 2258979 . - . ID=Thaps32223.2;Parent=Thaps32223;constitutive=1;rank=2 chr2 . CDS 2259179 2259280 . - 0 ID=Thaps32223;Parent=Thaps32223;rank=1 chr2 . exon 2259179 2259280 . - . ID=Thaps32223.1;Parent=Thaps32223;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2266999 2268231 . - . ID=Thaps39710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVS4];external_name=Thaps39710;logic_name=jgi_thaps3 chr2 ensembl transcript 2266999 2268231 . - . ID=Thaps39710;Parent=Thaps39710;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2266999 2268231 . - 0 ID=Thaps39710;Parent=Thaps39710;rank=1 chr2 . exon 2266999 2268231 . - . ID=Thaps39710.1;Parent=Thaps39710;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2272867 2275722 . - . ID=Thaps21530;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVS7];external_name=Thaps21530;logic_name=jgi_thaps3 chr2 ensembl transcript 2272867 2275722 . - . ID=Thaps21530;Parent=Thaps21530;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2272867 2273256 . - 0 ID=Thaps21530;Parent=Thaps21530;rank=3 chr2 . exon 2272867 2273256 . - . ID=Thaps21530.3;Parent=Thaps21530;constitutive=1;rank=3 chr2 . CDS 2273347 2275125 . - 0 ID=Thaps21530;Parent=Thaps21530;rank=2 chr2 . exon 2273347 2275125 . - . ID=Thaps21530.2;Parent=Thaps21530;constitutive=1;rank=2 chr2 . CDS 2275186 2275722 . - 0 ID=Thaps21530;Parent=Thaps21530;rank=1 chr2 . exon 2275186 2275722 . - . ID=Thaps21530.1;Parent=Thaps21530;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2270014 2271326 . - . ID=Thaps27273;biotype=protein_coding;description=Methylenetetrahydrofolate reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BVS6];external_name=Thaps27273;logic_name=jgi_thaps3 chr2 ensembl transcript 2270014 2271326 . - . ID=Thaps27273;Parent=Thaps27273;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2270014 2270564 . - 0 ID=Thaps27273;Parent=Thaps27273;rank=3 chr2 . exon 2270014 2270564 . - . ID=Thaps27273.3;Parent=Thaps27273;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2270657 2270714 . - 0 ID=Thaps27273;Parent=Thaps27273;rank=2 chr2 . exon 2270657 2270714 . - . ID=Thaps27273.2;Parent=Thaps27273;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2270784 2271326 . - 0 ID=Thaps27273;Parent=Thaps27273;rank=1 chr2 . exon 2270784 2271326 . - . ID=Thaps27273.1;Parent=Thaps27273;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2268588 2269859 . + . ID=Thaps2938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVS5];external_name=Thaps2938;logic_name=jgi_thaps3 chr2 ensembl transcript 2268588 2269859 . + . ID=Thaps2938;Parent=Thaps2938;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2268588 2269859 . + 0 ID=Thaps2938;Parent=Thaps2938;rank=1 chr2 . exon 2268588 2269859 . + . ID=Thaps2938.1;Parent=Thaps2938;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2276731 2281361 . + . ID=Thaps2941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVS8];external_name=Thaps2941;logic_name=jgi_thaps3 chr2 ensembl transcript 2276731 2281361 . + . ID=Thaps2941;Parent=Thaps2941;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2276731 2279730 . + 0 ID=Thaps2941;Parent=Thaps2941;rank=1 chr2 . exon 2276731 2279730 . + . ID=Thaps2941.1;Parent=Thaps2941;constitutive=1;rank=1 chr2 . CDS 2279840 2280452 . + 0 ID=Thaps2941;Parent=Thaps2941;rank=2 chr2 . CDS 2280537 2280913 . + 0 ID=Thaps2941;Parent=Thaps2941;rank=3 chr2 . CDS 2281000 2281125 . + 0 ID=Thaps2941;Parent=Thaps2941;rank=4 chr2 . CDS 2281194 2281256 . + 0 ID=Thaps2941;Parent=Thaps2941;rank=5 chr2 . CDS 2281332 2281361 . + 0 ID=Thaps2941;Parent=Thaps2941;rank=6 chr2 . repeat_region 2281421 2281447 . ? . description=dust chr2 . repeat_region 2281427 2281451 . ? . description=trf chr2 . repeat_region 2281799 2282096 . ? . description=trf chr2 . repeat_region 2282926 2293088 . ? . description=trf chr2 . repeat_region 2284917 2284942 . ? . description=trf chr2 . repeat_region 2287055 2287082 . ? . description=trf chr2 . exon 2279840 2280452 . + . ID=Thaps2941.2;Parent=Thaps2941;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . exon 2280537 2280913 . + . ID=Thaps2941.3;Parent=Thaps2941;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . exon 2281000 2281125 . + . ID=Thaps2941.4;Parent=Thaps2941;constitutive=1;rank=4 chr2 . exon 2281194 2281256 . + . ID=Thaps2941.5;Parent=Thaps2941;constitutive=1;rank=5 chr2 . exon 2281332 2281361 . + . ID=Thaps2941.6;Parent=Thaps2941;constitutive=1;rank=6 chr2 ensembl protein_coding_gene 2282826 2293387 . + . ID=Thaps2942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVS9];external_name=Thaps2942;logic_name=jgi_thaps3 chr2 ensembl transcript 2282826 2293387 . + . ID=Thaps2942;Parent=Thaps2942;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2282826 2283095 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=1 chr2 . exon 2282826 2283095 . + . ID=Thaps2942.1;Parent=Thaps2942;constitutive=1;rank=1 chr2 . CDS 2283227 2283394 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=2 chr2 . exon 2283227 2283394 . + . ID=Thaps2942.2;Parent=Thaps2942;constitutive=1;rank=2 chr2 . CDS 2283521 2283688 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=3 chr2 . exon 2283521 2283688 . + . ID=Thaps2942.3;Parent=Thaps2942;constitutive=1;rank=3 chr2 . CDS 2283820 2283987 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=4 chr2 . exon 2283820 2283987 . + . ID=Thaps2942.4;Parent=Thaps2942;constitutive=1;rank=4 chr2 . CDS 2284119 2284286 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=5 chr2 . exon 2284119 2284286 . + . ID=Thaps2942.5;Parent=Thaps2942;constitutive=1;rank=5 chr2 . CDS 2284418 2284585 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=6 chr2 . exon 2284418 2284585 . + . ID=Thaps2942.6;Parent=Thaps2942;constitutive=1;rank=6 chr2 . CDS 2284727 2284894 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=7 chr2 . exon 2284727 2284894 . + . ID=Thaps2942.7;Parent=Thaps2942;constitutive=1;rank=7 chr2 . CDS 2285031 2285198 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=8 chr2 . exon 2285031 2285198 . + . ID=Thaps2942.8;Parent=Thaps2942;constitutive=1;rank=8 chr2 . CDS 2285340 2285507 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=9 chr2 . exon 2285340 2285507 . + . ID=Thaps2942.9;Parent=Thaps2942;constitutive=1;rank=9 chr2 . CDS 2285649 2285816 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=10 chr2 . exon 2285649 2285816 . + . ID=Thaps2942.10;Parent=Thaps2942;constitutive=1;rank=10 chr2 . CDS 2285943 2286110 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=11 chr2 . exon 2285943 2286110 . + . ID=Thaps2942.11;Parent=Thaps2942;constitutive=1;rank=11 chr2 . CDS 2286242 2286409 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=12 chr2 . exon 2286242 2286409 . + . ID=Thaps2942.12;Parent=Thaps2942;constitutive=1;rank=12 chr2 . CDS 2286546 2286713 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=13 chr2 . exon 2286546 2286713 . + . ID=Thaps2942.13;Parent=Thaps2942;constitutive=1;rank=13 chr2 . CDS 2286845 2287012 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=14 chr2 . exon 2286845 2287012 . + . ID=Thaps2942.14;Parent=Thaps2942;constitutive=1;rank=14 chr2 . CDS 2287164 2287331 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=15 chr2 . exon 2287164 2287331 . + . ID=Thaps2942.15;Parent=Thaps2942;constitutive=1;rank=15 chr2 . CDS 2287463 2287630 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=16 chr2 . exon 2287463 2287630 . + . ID=Thaps2942.16;Parent=Thaps2942;constitutive=1;rank=16 chr2 . CDS 2287757 2287924 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=17 chr2 . CDS 2288056 2288223 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=18 chr2 . CDS 2288360 2288527 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=19 chr2 . CDS 2288659 2288826 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=20 chr2 . CDS 2288983 2289150 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=21 chr2 . CDS 2289287 2289454 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=22 chr2 . CDS 2289581 2289748 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=23 chr2 . CDS 2289885 2290052 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=24 chr2 . CDS 2290179 2290346 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=25 chr2 . CDS 2290483 2290650 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=26 chr2 . CDS 2290777 2290944 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=27 chr2 . CDS 2291086 2291253 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=28 chr2 . CDS 2291380 2291547 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=29 chr2 . CDS 2291689 2291856 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=30 chr2 . CDS 2291983 2292150 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=31 chr2 . CDS 2292292 2292459 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=32 chr2 . CDS 2292599 2292766 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=33 chr2 . CDS 2292911 2293078 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=34 chr2 . CDS 2293307 2293387 . + 0 ID=Thaps2942;Parent=Thaps2942;rank=35 chr2 . repeat_region 2297068 2297127 . - . description=Copia9LTR_TP chr2 ensembl protein_coding_gene 2297519 2299248 . + . ID=Thaps21532;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVT2];external_name=Thaps21532;logic_name=jgi_thaps3 chr2 ensembl transcript 2297519 2299248 . + . ID=Thaps21532;Parent=Thaps21532;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2297519 2298905 . + 0 ID=Thaps21532;Parent=Thaps21532;rank=1 chr2 . exon 2297519 2298905 . + . ID=Thaps21532.1;Parent=Thaps21532;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2299124 2299248 . + 0 ID=Thaps21532;Parent=Thaps21532;rank=2 chr2 ensembl protein_coding_gene 2294538 2295996 . + . ID=Thaps27276;biotype=protein_coding;description=Phosphate transport protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVT0];external_name=PTP1;logic_name=jgi_thaps3 chr2 ensembl transcript 2294538 2295996 . + . ID=Thaps27276;Parent=Thaps27276;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2294538 2294651 . + 0 ID=Thaps27276;Parent=Thaps27276;rank=1 chr2 . exon 2294538 2294651 . + . ID=Thaps27276.1;Parent=Thaps27276;constitutive=1;rank=1 chr2 . CDS 2295123 2295731 . + 0 ID=Thaps27276;Parent=Thaps27276;rank=2 chr2 . exon 2295123 2295731 . + . ID=Thaps27276.2;Parent=Thaps27276;constitutive=1;rank=2 chr2 . CDS 2295814 2295996 . + 0 ID=Thaps27276;Parent=Thaps27276;rank=3 chr2 . exon 2295814 2295996 . + . ID=Thaps27276.3;Parent=Thaps27276;constitutive=1;rank=3 chr2 . exon 2287757 2287924 . + . ID=Thaps2942.17;Parent=Thaps2942;constitutive=1;rank=17 chr2 . exon 2288056 2288223 . + . ID=Thaps2942.18;Parent=Thaps2942;constitutive=1;rank=18 chr2 . exon 2288360 2288527 . + . ID=Thaps2942.19;Parent=Thaps2942;constitutive=1;rank=19 chr2 . exon 2288659 2288826 . + . ID=Thaps2942.20;Parent=Thaps2942;constitutive=1;rank=20 chr2 . exon 2288983 2289150 . + . ID=Thaps2942.21;Parent=Thaps2942;constitutive=1;rank=21 chr2 . exon 2289287 2289454 . + . ID=Thaps2942.22;Parent=Thaps2942;constitutive=1;rank=22 chr2 . exon 2289581 2289748 . + . ID=Thaps2942.23;Parent=Thaps2942;constitutive=1;rank=23 chr2 . exon 2289885 2290052 . + . ID=Thaps2942.24;Parent=Thaps2942;constitutive=1;rank=24 chr2 . exon 2290179 2290346 . + . ID=Thaps2942.25;Parent=Thaps2942;constitutive=1;rank=25 chr2 . exon 2290483 2290650 . + . ID=Thaps2942.26;Parent=Thaps2942;constitutive=1;rank=26 chr2 . exon 2290777 2290944 . + . ID=Thaps2942.27;Parent=Thaps2942;constitutive=1;rank=27 chr2 . exon 2291086 2291253 . + . ID=Thaps2942.28;Parent=Thaps2942;constitutive=1;rank=28 chr2 . exon 2291380 2291547 . + . ID=Thaps2942.29;Parent=Thaps2942;constitutive=1;rank=29 chr2 . exon 2291689 2291856 . + . ID=Thaps2942.30;Parent=Thaps2942;constitutive=1;rank=30 chr2 . exon 2291983 2292150 . + . ID=Thaps2942.31;Parent=Thaps2942;constitutive=1;rank=31 chr2 . exon 2292292 2292459 . + . ID=Thaps2942.32;Parent=Thaps2942;constitutive=1;rank=32 chr2 . exon 2292599 2292766 . + . ID=Thaps2942.33;Parent=Thaps2942;constitutive=1;rank=33 chr2 . exon 2292911 2293078 . + . ID=Thaps2942.34;Parent=Thaps2942;constitutive=1;rank=34 chr2 . exon 2293307 2293387 . + . ID=Thaps2942.35;Parent=Thaps2942;constitutive=1;rank=35 chr2 ensembl protein_coding_gene 2296220 2297035 . - . ID=Thaps2944;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVT1];external_name=Thaps2944;logic_name=jgi_thaps3 chr2 ensembl transcript 2296220 2297035 . - . ID=Thaps2944;Parent=Thaps2944;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2296220 2297035 . - 0 ID=Thaps2944;Parent=Thaps2944;rank=1 chr2 . exon 2296220 2297035 . - . ID=Thaps2944.1;Parent=Thaps2944;constitutive=1;rank=1 chr2 . repeat_region 2299159 2299167 . ? . description=dust chr2 . repeat_region 2299772 2299836 . ? . description=dust chr2 . repeat_region 2299784 2299817 . ? . description=trf chr2 . repeat_region 2303198 2303225 . ? . description=dust chr2 . repeat_region 2303199 2303225 . ? . description=trf chr2 . repeat_region 2304194 2304235 . ? . description=dust chr2 . repeat_region 2304628 2304635 . ? . description=dust chr2 . exon 2299124 2299248 . + . ID=Thaps21532.2;Parent=Thaps21532;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 2301154 2304697 . - . ID=Thaps21533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVT4];external_name=Thaps21533;logic_name=jgi_thaps3 chr2 ensembl transcript 2301154 2304697 . - . ID=Thaps21533;Parent=Thaps21533;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2301154 2301207 . - 0 ID=Thaps21533;Parent=Thaps21533;rank=3 chr2 . exon 2301154 2301207 . - . ID=Thaps21533.3;Parent=Thaps21533;constitutive=1;rank=3 chr2 . CDS 2301336 2303191 . - 0 ID=Thaps21533;Parent=Thaps21533;rank=2 chr2 . exon 2301336 2303191 . - . ID=Thaps21533.2;Parent=Thaps21533;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2303317 2304697 . - 0 ID=Thaps21533;Parent=Thaps21533;rank=1 chr2 . exon 2303317 2304697 . - . ID=Thaps21533.1;Parent=Thaps21533;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2300155 2301020 . + . ID=Thaps2946;biotype=protein_coding;description=Probable cytidylate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BVT3];external_name=Thaps2946;logic_name=jgi_thaps3 chr2 ensembl transcript 2300155 2301020 . + . ID=Thaps2946;Parent=Thaps2946;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2300155 2300739 . + 0 ID=Thaps2946;Parent=Thaps2946;rank=1 chr2 . exon 2300155 2300739 . + . ID=Thaps2946.1;Parent=Thaps2946;constitutive=1;rank=1 chr2 . CDS 2300871 2301020 . + 0 ID=Thaps2946;Parent=Thaps2946;rank=2 chr2 . exon 2300871 2301020 . + . ID=Thaps2946.2;Parent=Thaps2946;constitutive=1;rank=2 chr2 ensembl tRNA_gene 2311187 2311269 . + . ID=EPrTPOG00000000076;biotype=tRNA;description=tRNA-Gly for anticodon GCC [Source:TRNASCAN_SE%3BAcc:tRNA-Gly];external_name=tRNA-Gly;logic_name=ncrna_eg chr2 ensembl transcript 2311187 2311269 . + . ID=EPrTPOT00000000076;Parent=EPrTPOG00000000076;biotype=tRNA;logic_name=ncrna_eg chr2 ensembl tRNA_gene 2311274 2311346 . + . ID=EPrTPOG00000000102;biotype=tRNA;description=tRNA-Glu for anticodon UUC [Source:TRNASCAN_SE%3BAcc:tRNA-Glu];external_name=tRNA-Glu;logic_name=ncrna_eg chr2 ensembl transcript 2311274 2311346 . + . ID=EPrTPOT00000000102;Parent=EPrTPOG00000000102;biotype=tRNA;logic_name=ncrna_eg chr2 . exon 2311187 2311269 . + . ID=EPrTPOE00000000076;Parent=EPrTPOT00000000076;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . exon 2311274 2311346 . + . ID=EPrTPOE00000000102;Parent=EPrTPOT00000000102;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2308177 2308404 . + . ID=Thaps20421;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVT5];external_name=Thaps20421;logic_name=jgi_thaps3 chr2 ensembl transcript 2308177 2308404 . + . ID=Thaps20421;Parent=Thaps20421;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2308177 2308404 . + 0 ID=Thaps20421;Parent=Thaps20421;rank=1 chr2 . exon 2308177 2308404 . + . ID=Thaps20421.1;Parent=Thaps20421;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2315429 2317180 . + . ID=Thaps21535;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVU0];external_name=Thaps21535;logic_name=jgi_thaps3 chr2 ensembl transcript 2315429 2317180 . + . ID=Thaps21535;Parent=Thaps21535;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2315429 2317180 . + 0 ID=Thaps21535;Parent=Thaps21535;rank=1 chr2 . exon 2315429 2317180 . + . ID=Thaps21535.1;Parent=Thaps21535;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2310256 2310558 . - . ID=Thaps261582;biotype=protein_coding;description=Glutathione s-transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BVT7];external_name=Thaps261582;logic_name=jgi_thaps3 chr2 ensembl transcript 2310256 2310558 . - . ID=Thaps261582;Parent=Thaps261582;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2310256 2310558 . - 0 ID=Thaps261582;Parent=Thaps261582;rank=1 chr2 . exon 2310256 2310558 . - . ID=Thaps261582.1;Parent=Thaps261582;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2312675 2313667 . + . ID=Thaps2950;biotype=protein_coding;description=Uroporphyrinogen III synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BVT8];external_name=UROS;logic_name=jgi_thaps3 chr2 ensembl transcript 2312675 2313667 . + . ID=Thaps2950;Parent=Thaps2950;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2312675 2313667 . + 0 ID=Thaps2950;Parent=Thaps2950;rank=1 chr2 . exon 2312675 2313667 . + . ID=Thaps2950.1;Parent=Thaps2950;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2313981 2314736 . + . ID=Thaps2951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVT9];external_name=Thaps2951;logic_name=jgi_thaps3 chr2 ensembl transcript 2313981 2314736 . + . ID=Thaps2951;Parent=Thaps2951;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2313981 2314736 . + 0 ID=Thaps2951;Parent=Thaps2951;rank=1 chr2 . exon 2313981 2314736 . + . ID=Thaps2951.1;Parent=Thaps2951;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2309461 2310009 . - . ID=Thaps31751;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVT6];external_name=Thaps31751;logic_name=jgi_thaps3 chr2 ensembl transcript 2309461 2310009 . - . ID=Thaps31751;Parent=Thaps31751;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2309461 2310009 . - 0 ID=Thaps31751;Parent=Thaps31751;rank=1 chr2 . exon 2309461 2310009 . - . ID=Thaps31751.1;Parent=Thaps31751;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2321916 2329224 . + . ID=Thaps26140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVU2];external_name=Thaps26140;logic_name=jgi_thaps3 chr2 ensembl transcript 2321916 2329224 . + . ID=Thaps26140;Parent=Thaps26140;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2321916 2322377 . + 0 ID=Thaps26140;Parent=Thaps26140;rank=1 chr2 . exon 2321916 2322377 . + . ID=Thaps26140.1;Parent=Thaps26140;constitutive=1;rank=1 chr2 . CDS 2322474 2322915 . + 0 ID=Thaps26140;Parent=Thaps26140;rank=2 chr2 . exon 2322474 2322915 . + . ID=Thaps26140.2;Parent=Thaps26140;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2323228 2326822 . + 0 ID=Thaps26140;Parent=Thaps26140;rank=3 chr2 . exon 2323228 2326822 . + . ID=Thaps26140.3;Parent=Thaps26140;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2326914 2329224 . + 0 ID=Thaps26140;Parent=Thaps26140;rank=4 chr2 . exon 2326914 2329224 . + . ID=Thaps26140.4;Parent=Thaps26140;constitutive=1;ensembl_end_phase=1;rank=4 chr2 ensembl protein_coding_gene 2320803 2321491 . + . ID=Thaps2954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVU1];external_name=Thaps2954;logic_name=jgi_thaps3 chr2 ensembl transcript 2320803 2321491 . + . ID=Thaps2954;Parent=Thaps2954;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2320803 2321056 . + 0 ID=Thaps2954;Parent=Thaps2954;rank=1 chr2 . exon 2320803 2321056 . + . ID=Thaps2954.1;Parent=Thaps2954;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 2321194 2321236 . + 0 ID=Thaps2954;Parent=Thaps2954;rank=2 chr2 . exon 2321194 2321236 . + . ID=Thaps2954.2;Parent=Thaps2954;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2321282 2321491 . + 0 ID=Thaps2954;Parent=Thaps2954;rank=3 chr2 . exon 2321282 2321491 . + . ID=Thaps2954.3;Parent=Thaps2954;constitutive=1;rank=3 chr2 . repeat_region 2330151 2330197 . ? . description=trf chr2 . repeat_region 2330269 2330344 . ? . description=trf chr2 . repeat_region 2330284 2330338 . ? . description=dust chr2 . repeat_region 2330386 2330417 . ? . description=trf chr2 . repeat_region 2330719 2330736 . ? . description=dust chr2 . repeat_region 2331283 2331293 . ? . description=dust chr2 . repeat_region 2332107 2332131 . ? . description=trf chr2 . repeat_region 2332107 2332131 . ? . description=dust chr2 . repeat_region 2332692 2332716 . ? . description=trf chr2 . repeat_region 2332692 2332716 . ? . description=dust chr2 . repeat_region 2333294 2333322 . ? . description=trf chr2 ensembl protein_coding_gene 2329524 2330717 . + . ID=Thaps2956;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVU3];external_name=Thaps2956;logic_name=jgi_thaps3 chr2 ensembl transcript 2329524 2330717 . + . ID=Thaps2956;Parent=Thaps2956;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2329524 2329779 . + 0 ID=Thaps2956;Parent=Thaps2956;rank=1 chr2 . exon 2329524 2329779 . + . ID=Thaps2956.1;Parent=Thaps2956;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2329870 2330717 . + 0 ID=Thaps2956;Parent=Thaps2956;rank=2 chr2 . exon 2329870 2330717 . + . ID=Thaps2956.2;Parent=Thaps2956;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 2333492 2333803 . - . ID=Thaps2957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVU4];external_name=Thaps2957;logic_name=jgi_thaps3 chr2 ensembl transcript 2333492 2333803 . - . ID=Thaps2957;Parent=Thaps2957;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2333492 2333803 . - 0 ID=Thaps2957;Parent=Thaps2957;rank=1 chr2 . exon 2333492 2333803 . - . ID=Thaps2957.1;Parent=Thaps2957;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2333979 2340370 . + . ID=Thaps2958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVU5];external_name=Thaps2958;logic_name=jgi_thaps3 chr2 ensembl transcript 2333979 2340370 . + . ID=Thaps2958;Parent=Thaps2958;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2333979 2334116 . + 0 ID=Thaps2958;Parent=Thaps2958;rank=1 chr2 . exon 2333979 2334116 . + . ID=Thaps2958.1;Parent=Thaps2958;constitutive=1;rank=1 chr2 . CDS 2334255 2334626 . + 0 ID=Thaps2958;Parent=Thaps2958;rank=2 chr2 . exon 2334255 2334626 . + . ID=Thaps2958.2;Parent=Thaps2958;constitutive=1;rank=2 chr2 . CDS 2334755 2335580 . + 0 ID=Thaps2958;Parent=Thaps2958;rank=3 chr2 . exon 2334755 2335580 . + . ID=Thaps2958.3;Parent=Thaps2958;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2335617 2336347 . + 0 ID=Thaps2958;Parent=Thaps2958;rank=4 chr2 . exon 2335617 2336347 . + . ID=Thaps2958.4;Parent=Thaps2958;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2336379 2339600 . + 0 ID=Thaps2958;Parent=Thaps2958;rank=5 chr2 . exon 2336379 2339600 . + . ID=Thaps2958.5;Parent=Thaps2958;constitutive=1;rank=5 chr2 . CDS 2339741 2340370 . + 0 ID=Thaps2958;Parent=Thaps2958;rank=6 chr2 . repeat_region 2340648 2340771 . - . description=TE2c_TP chr2 ensembl protein_coding_gene 2346401 2349120 . + . ID=Thaps21537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVU7];external_name=Thaps21537;logic_name=jgi_thaps3 chr2 ensembl transcript 2346401 2349120 . + . ID=Thaps21537;Parent=Thaps21537;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2346401 2346538 . + 0 ID=Thaps21537;Parent=Thaps21537;rank=1 chr2 . exon 2346401 2346538 . + . ID=Thaps21537.1;Parent=Thaps21537;constitutive=1;rank=1 chr2 . CDS 2346677 2347048 . + 0 ID=Thaps21537;Parent=Thaps21537;rank=2 chr2 . exon 2346677 2347048 . + . ID=Thaps21537.2;Parent=Thaps21537;constitutive=1;rank=2 chr2 . CDS 2347177 2349120 . + 0 ID=Thaps21537;Parent=Thaps21537;rank=3 chr2 . exon 2347177 2349120 . + . ID=Thaps21537.3;Parent=Thaps21537;constitutive=1;rank=3 chr2 . exon 2339741 2340370 . + . ID=Thaps2958.6;Parent=Thaps2958;constitutive=1;rank=6 chr2 ensembl protein_coding_gene 2340912 2342376 . + . ID=Thaps2959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVU6];external_name=Thaps2959;logic_name=jgi_thaps3 chr2 ensembl transcript 2340912 2342376 . + . ID=Thaps2959;Parent=Thaps2959;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2340912 2341039 . + 0 ID=Thaps2959;Parent=Thaps2959;rank=1 chr2 . exon 2340912 2341039 . + . ID=Thaps2959.1;Parent=Thaps2959;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 2341172 2341293 . + 0 ID=Thaps2959;Parent=Thaps2959;rank=2 chr2 . exon 2341172 2341293 . + . ID=Thaps2959.2;Parent=Thaps2959;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2341385 2342376 . + 0 ID=Thaps2959;Parent=Thaps2959;rank=3 chr2 . exon 2341385 2342376 . + . ID=Thaps2959.3;Parent=Thaps2959;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . repeat_region 2354585 2354601 . ? . description=dust chr2 ensembl protein_coding_gene 2349489 2353729 . + . ID=Thaps21538;biotype=protein_coding;description=5-oxoprolinase [Source:UniProtKB/TrEMBL%3BAcc:B8BVU8];external_name=Thaps21538;logic_name=jgi_thaps3 chr2 ensembl transcript 2349489 2353729 . + . ID=Thaps21538;Parent=Thaps21538;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2349489 2349957 . + 0 ID=Thaps21538;Parent=Thaps21538;rank=1 chr2 . exon 2349489 2349957 . + . ID=Thaps21538.1;Parent=Thaps21538;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2350063 2350674 . + 0 ID=Thaps21538;Parent=Thaps21538;rank=2 chr2 . exon 2350063 2350674 . + . ID=Thaps21538.2;Parent=Thaps21538;constitutive=1;rank=2 chr2 . CDS 2350751 2350787 . + 0 ID=Thaps21538;Parent=Thaps21538;rank=3 chr2 . exon 2350751 2350787 . + . ID=Thaps21538.3;Parent=Thaps21538;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2350856 2351141 . + 0 ID=Thaps21538;Parent=Thaps21538;rank=4 chr2 . exon 2350856 2351141 . + . ID=Thaps21538.4;Parent=Thaps21538;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 2351219 2352496 . + 0 ID=Thaps21538;Parent=Thaps21538;rank=5 chr2 . exon 2351219 2352496 . + . ID=Thaps21538.5;Parent=Thaps21538;constitutive=1;rank=5 chr2 . CDS 2352578 2353729 . + 0 ID=Thaps21538;Parent=Thaps21538;rank=6 chr2 . exon 2352578 2353729 . + . ID=Thaps21538.6;Parent=Thaps21538;constitutive=1;rank=6 chr2 ensembl protein_coding_gene 2354942 2356852 . + . ID=Thaps21539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVV0];external_name=Thaps21539;logic_name=jgi_thaps3 chr2 ensembl transcript 2354942 2356852 . + . ID=Thaps21539;Parent=Thaps21539;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2354942 2355003 . + 0 ID=Thaps21539;Parent=Thaps21539;rank=1 chr2 . exon 2354942 2355003 . + . ID=Thaps21539.1;Parent=Thaps21539;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 2355122 2355776 . + 0 ID=Thaps21539;Parent=Thaps21539;rank=2 chr2 . exon 2355122 2355776 . + . ID=Thaps21539.2;Parent=Thaps21539;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2355868 2356408 . + 0 ID=Thaps21539;Parent=Thaps21539;rank=3 chr2 . exon 2355868 2356408 . + . ID=Thaps21539.3;Parent=Thaps21539;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2356500 2356852 . + 0 ID=Thaps21539;Parent=Thaps21539;rank=4 chr2 . exon 2356500 2356852 . + . ID=Thaps21539.4;Parent=Thaps21539;constitutive=1;ensembl_end_phase=2;rank=4 chr2 ensembl protein_coding_gene 2353998 2354405 . - . ID=Thaps31778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVU9];external_name=Thaps31778;logic_name=jgi_thaps3 chr2 ensembl transcript 2353998 2354405 . - . ID=Thaps31778;Parent=Thaps31778;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2353998 2354405 . - 0 ID=Thaps31778;Parent=Thaps31778;rank=1 chr2 . exon 2353998 2354405 . - . ID=Thaps31778.1;Parent=Thaps31778;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2364989 2366501 . - . ID=Thaps14482;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVV4];external_name=Thaps14482;logic_name=jgi_thaps3 chr2 ensembl transcript 2364989 2366501 . - . ID=Thaps14482;Parent=Thaps14482;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2364989 2365494 . - 0 ID=Thaps14482;Parent=Thaps14482;rank=4 chr2 . exon 2364989 2365494 . - . ID=Thaps14482.4;Parent=Thaps14482;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2365575 2365747 . - 0 ID=Thaps14482;Parent=Thaps14482;rank=3 chr2 . exon 2365575 2365747 . - . ID=Thaps14482.3;Parent=Thaps14482;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2365853 2365913 . - 0 ID=Thaps14482;Parent=Thaps14482;rank=2 chr2 . exon 2365853 2365913 . - . ID=Thaps14482.2;Parent=Thaps14482;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2365985 2366501 . - 0 ID=Thaps14482;Parent=Thaps14482;rank=1 chr2 . exon 2365985 2366501 . - . ID=Thaps14482.1;Parent=Thaps14482;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2363195 2364885 . + . ID=Thaps2965;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVV3];external_name=Thaps2965;logic_name=jgi_thaps3 chr2 ensembl transcript 2363195 2364885 . + . ID=Thaps2965;Parent=Thaps2965;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2363195 2363255 . + 0 ID=Thaps2965;Parent=Thaps2965;rank=1 chr2 . exon 2363195 2363255 . + . ID=Thaps2965.1;Parent=Thaps2965;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2363391 2363574 . + 0 ID=Thaps2965;Parent=Thaps2965;rank=2 chr2 . exon 2363391 2363574 . + . ID=Thaps2965.2;Parent=Thaps2965;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2363769 2364885 . + 0 ID=Thaps2965;Parent=Thaps2965;rank=3 chr2 . exon 2363769 2364885 . + . ID=Thaps2965.3;Parent=Thaps2965;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 2362217 2362795 . - . ID=Thaps32481;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVV2];external_name=Thaps32481;logic_name=jgi_thaps3 chr2 ensembl transcript 2362217 2362795 . - . ID=Thaps32481;Parent=Thaps32481;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2362217 2362437 . - 0 ID=Thaps32481;Parent=Thaps32481;rank=2 chr2 . exon 2362217 2362437 . - . ID=Thaps32481.2;Parent=Thaps32481;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2362501 2362795 . - 0 ID=Thaps32481;Parent=Thaps32481;rank=1 chr2 . exon 2362501 2362795 . - . ID=Thaps32481.1;Parent=Thaps32481;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2358518 2359572 . - . ID=Thaps32503;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVV1];external_name=Thaps32503;logic_name=jgi_thaps3 chr2 ensembl transcript 2358518 2359572 . - . ID=Thaps32503;Parent=Thaps32503;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2358518 2358986 . - 0 ID=Thaps32503;Parent=Thaps32503;rank=3 chr2 . exon 2358518 2358986 . - . ID=Thaps32503.3;Parent=Thaps32503;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2359115 2359404 . - 0 ID=Thaps32503;Parent=Thaps32503;rank=2 chr2 . exon 2359115 2359404 . - . ID=Thaps32503.2;Parent=Thaps32503;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2359483 2359572 . - 0 ID=Thaps32503;Parent=Thaps32503;rank=1 chr2 . exon 2359483 2359572 . - . ID=Thaps32503.1;Parent=Thaps32503;constitutive=1;rank=1 chr2 . repeat_region 2374467 2374503 . ? . description=trf chr2 . repeat_region 2374467 2374503 . ? . description=dust chr2 ensembl protein_coding_gene 2374455 2376305 . + . ID=Thaps21544;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVV8];external_name=Thaps21544;logic_name=jgi_thaps3 chr2 ensembl transcript 2374455 2376305 . + . ID=Thaps21544;Parent=Thaps21544;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2374455 2376305 . + 0 ID=Thaps21544;Parent=Thaps21544;rank=1 chr2 . exon 2374455 2376305 . + . ID=Thaps21544.1;Parent=Thaps21544;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2376547 2378340 . - . ID=Thaps21545;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVV9];external_name=Thaps21545;logic_name=jgi_thaps3 chr2 ensembl transcript 2376547 2378340 . - . ID=Thaps21545;Parent=Thaps21545;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2376547 2378340 . - 0 ID=Thaps21545;Parent=Thaps21545;rank=1 chr2 . exon 2376547 2378340 . - . ID=Thaps21545.1;Parent=Thaps21545;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2370562 2372386 . + . ID=Thaps261589;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVV6];external_name=Thaps261589;logic_name=jgi_thaps3 chr2 ensembl transcript 2370562 2372386 . + . ID=Thaps261589;Parent=Thaps261589;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2370562 2370723 . + 0 ID=Thaps261589;Parent=Thaps261589;rank=1 chr2 . exon 2370562 2370723 . + . ID=Thaps261589.1;Parent=Thaps261589;constitutive=1;rank=1 chr2 . CDS 2370790 2370979 . + 0 ID=Thaps261589;Parent=Thaps261589;rank=2 chr2 . exon 2370790 2370979 . + . ID=Thaps261589.2;Parent=Thaps261589;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2371068 2371350 . + 0 ID=Thaps261589;Parent=Thaps261589;rank=3 chr2 . exon 2371068 2371350 . + . ID=Thaps261589.3;Parent=Thaps261589;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2371498 2371680 . + 0 ID=Thaps261589;Parent=Thaps261589;rank=4 chr2 . exon 2371498 2371680 . + . ID=Thaps261589.4;Parent=Thaps261589;constitutive=1;rank=4 chr2 . CDS 2371766 2371838 . + 0 ID=Thaps261589;Parent=Thaps261589;rank=5 chr2 . exon 2371766 2371838 . + . ID=Thaps261589.5;Parent=Thaps261589;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 2371907 2372386 . + 0 ID=Thaps261589;Parent=Thaps261589;rank=6 chr2 . exon 2371907 2372386 . + . ID=Thaps261589.6;Parent=Thaps261589;constitutive=1;rank=6 chr2 ensembl protein_coding_gene 2372909 2373915 . - . ID=Thaps27292;biotype=protein_coding;description=RS4%2C ribosomal protein 4 [Source:UniProtKB/TrEMBL%3BAcc:B8BVV7];external_name=RS4;logic_name=jgi_thaps3 chr2 ensembl transcript 2372909 2373915 . - . ID=Thaps27292;Parent=Thaps27292;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2372909 2373692 . - 0 ID=Thaps27292;Parent=Thaps27292;rank=2 chr2 . exon 2372909 2373692 . - . ID=Thaps27292.2;Parent=Thaps27292;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2373914 2373915 . - 0 ID=Thaps27292;Parent=Thaps27292;rank=1 chr2 . exon 2373914 2373915 . - . ID=Thaps27292.1;Parent=Thaps27292;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2368843 2369916 . + . ID=Thaps39726;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVV5];external_name=Thaps39726;logic_name=jgi_thaps3 chr2 ensembl transcript 2368843 2369916 . + . ID=Thaps39726;Parent=Thaps39726;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2368843 2369916 . + 0 ID=Thaps39726;Parent=Thaps39726;rank=1 chr2 . exon 2368843 2369916 . + . ID=Thaps39726.1;Parent=Thaps39726;constitutive=1;rank=1 chr2 . repeat_region 2382477 2382632 . + . description=TE2a_TP chr2 ensembl protein_coding_gene 2386094 2388933 . + . ID=Thaps21546;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW3];external_name=Thaps21546;logic_name=jgi_thaps3 chr2 ensembl transcript 2386094 2388933 . + . ID=Thaps21546;Parent=Thaps21546;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2386094 2387701 . + 0 ID=Thaps21546;Parent=Thaps21546;rank=1 chr2 . exon 2386094 2387701 . + . ID=Thaps21546.1;Parent=Thaps21546;constitutive=1;rank=1 chr2 . CDS 2387789 2387884 . + 0 ID=Thaps21546;Parent=Thaps21546;rank=2 chr2 . CDS 2387962 2388933 . + 0 ID=Thaps21546;Parent=Thaps21546;rank=3 chr2 ensembl protein_coding_gene 2382807 2383739 . + . ID=Thaps2973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW1];external_name=Thaps2973;logic_name=jgi_thaps3 chr2 ensembl transcript 2382807 2383739 . + . ID=Thaps2973;Parent=Thaps2973;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2382807 2383739 . + 0 ID=Thaps2973;Parent=Thaps2973;rank=1 chr2 . exon 2382807 2383739 . + . ID=Thaps2973.1;Parent=Thaps2973;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2384102 2385789 . - . ID=Thaps2974;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW2];external_name=Thaps2974;logic_name=jgi_thaps3 chr2 ensembl transcript 2384102 2385789 . - . ID=Thaps2974;Parent=Thaps2974;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2384102 2384624 . - 0 ID=Thaps2974;Parent=Thaps2974;rank=2 chr2 . exon 2384102 2384624 . - . ID=Thaps2974.2;Parent=Thaps2974;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2385077 2385789 . - 0 ID=Thaps2974;Parent=Thaps2974;rank=1 chr2 . exon 2385077 2385789 . - . ID=Thaps2974.1;Parent=Thaps2974;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2380761 2381057 . + . ID=Thaps31732;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW0];external_name=Thaps31732;logic_name=jgi_thaps3 chr2 ensembl transcript 2380761 2381057 . + . ID=Thaps31732;Parent=Thaps31732;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2380761 2381057 . + 0 ID=Thaps31732;Parent=Thaps31732;rank=1 chr2 . exon 2380761 2381057 . + . ID=Thaps31732.1;Parent=Thaps31732;constitutive=1;rank=1 chr2 . repeat_region 2390949 2391567 . ? . description=trf chr2 . repeat_region 2390949 2391567 . ? . description=trf chr2 . repeat_region 2392656 2392693 . ? . description=dust chr2 . repeat_region 2392815 2392851 . ? . description=dust chr2 . repeat_region 2392822 2392851 . ? . description=trf chr2 . repeat_region 2394920 2394933 . ? . description=dust chr2 . exon 2387789 2387884 . + . ID=Thaps21546.2;Parent=Thaps21546;constitutive=1;rank=2 chr2 . exon 2387962 2388933 . + . ID=Thaps21546.3;Parent=Thaps21546;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 2396825 2398504 . - . ID=Thaps21548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW6];external_name=Thaps21548;logic_name=jgi_thaps3 chr2 ensembl transcript 2396825 2398504 . - . ID=Thaps21548;Parent=Thaps21548;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2396825 2398504 . - 0 ID=Thaps21548;Parent=Thaps21548;rank=1 chr2 . exon 2396825 2398504 . - . ID=Thaps21548.1;Parent=Thaps21548;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2392855 2394087 . - . ID=Thaps2977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW4];external_name=Thaps2977;logic_name=jgi_thaps3 chr2 ensembl transcript 2392855 2394087 . - . ID=Thaps2977;Parent=Thaps2977;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2392855 2394087 . - 0 ID=Thaps2977;Parent=Thaps2977;rank=1 chr2 . exon 2392855 2394087 . - . ID=Thaps2977.1;Parent=Thaps2977;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2395841 2396287 . + . ID=Thaps32211;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW5];external_name=Thaps32211;logic_name=jgi_thaps3 chr2 ensembl transcript 2395841 2396287 . + . ID=Thaps32211;Parent=Thaps32211;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2395841 2396287 . + 0 ID=Thaps32211;Parent=Thaps32211;rank=1 chr2 . exon 2395841 2396287 . + . ID=Thaps32211.1;Parent=Thaps32211;constitutive=1;rank=1 chr2 . repeat_region 2401883 2402358 . + . description=Copia8I_TP chr2 ensembl protein_coding_gene 2399107 2401594 . + . ID=Thaps21549;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW7];external_name=Thaps21549;logic_name=jgi_thaps3 chr2 ensembl transcript 2399107 2401594 . + . ID=Thaps21549;Parent=Thaps21549;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2399107 2399958 . + 0 ID=Thaps21549;Parent=Thaps21549;rank=1 chr2 . exon 2399107 2399958 . + . ID=Thaps21549.1;Parent=Thaps21549;constitutive=1;rank=1 chr2 . CDS 2400092 2401594 . + 0 ID=Thaps21549;Parent=Thaps21549;rank=2 chr2 . exon 2400092 2401594 . + . ID=Thaps21549.2;Parent=Thaps21549;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 2406854 2407819 . - . ID=Thaps2983;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVX0];external_name=Thaps2983;logic_name=jgi_thaps3 chr2 ensembl transcript 2406854 2407819 . - . ID=Thaps2983;Parent=Thaps2983;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2406854 2407819 . - 0 ID=Thaps2983;Parent=Thaps2983;rank=1 chr2 . exon 2406854 2407819 . - . ID=Thaps2983.1;Parent=Thaps2983;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2404877 2406022 . - . ID=Thaps32468;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW9];external_name=Thaps32468;logic_name=jgi_thaps3 chr2 ensembl transcript 2404877 2406022 . - . ID=Thaps32468;Parent=Thaps32468;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2404877 2405246 . - 0 ID=Thaps32468;Parent=Thaps32468;rank=3 chr2 . exon 2404877 2405246 . - . ID=Thaps32468.3;Parent=Thaps32468;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2405340 2405800 . - 0 ID=Thaps32468;Parent=Thaps32468;rank=2 chr2 . exon 2405340 2405800 . - . ID=Thaps32468.2;Parent=Thaps32468;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2405891 2406022 . - 0 ID=Thaps32468;Parent=Thaps32468;rank=1 chr2 . exon 2405891 2406022 . - . ID=Thaps32468.1;Parent=Thaps32468;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2404179 2404679 . + . ID=Thaps32491;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVW8];external_name=Thaps32491;logic_name=jgi_thaps3 chr2 ensembl transcript 2404179 2404679 . + . ID=Thaps32491;Parent=Thaps32491;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2404179 2404679 . + 0 ID=Thaps32491;Parent=Thaps32491;rank=1 chr2 . exon 2404179 2404679 . + . ID=Thaps32491.1;Parent=Thaps32491;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2409479 2423872 . - . ID=Thaps2984;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVX1];external_name=Thaps2984;logic_name=jgi_thaps3 chr2 ensembl transcript 2409479 2423872 . - . ID=Thaps2984;Parent=Thaps2984;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2409479 2419990 . - 0 ID=Thaps2984;Parent=Thaps2984;rank=6 chr2 . exon 2409479 2419990 . - . ID=Thaps2984.6;Parent=Thaps2984;constitutive=1;rank=6 chr2 . CDS 2420093 2420311 . - 0 ID=Thaps2984;Parent=Thaps2984;rank=5 chr2 . CDS 2420394 2421200 . - 0 ID=Thaps2984;Parent=Thaps2984;rank=4 chr2 . CDS 2421313 2422509 . - 0 ID=Thaps2984;Parent=Thaps2984;rank=3 chr2 . CDS 2422609 2423367 . - 0 ID=Thaps2984;Parent=Thaps2984;rank=2 chr2 . CDS 2423654 2423872 . - 0 ID=Thaps2984;Parent=Thaps2984;rank=1 chr2 . repeat_region 2426878 2426918 . ? . description=trf chr2 . exon 2420093 2420311 . - . ID=Thaps2984.5;Parent=Thaps2984;constitutive=1;rank=5 chr2 . exon 2420394 2421200 . - . ID=Thaps2984.4;Parent=Thaps2984;constitutive=1;rank=4 chr2 . exon 2421313 2422509 . - . ID=Thaps2984.3;Parent=Thaps2984;constitutive=1;rank=3 chr2 . exon 2422609 2423367 . - . ID=Thaps2984.2;Parent=Thaps2984;constitutive=1;rank=2 chr2 . exon 2423654 2423872 . - . ID=Thaps2984.1;Parent=Thaps2984;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2425204 2426019 . - . ID=Thaps2985;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVX2];external_name=Thaps2985;logic_name=jgi_thaps3 chr2 ensembl transcript 2425204 2426019 . - . ID=Thaps2985;Parent=Thaps2985;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2425204 2426019 . - 0 ID=Thaps2985;Parent=Thaps2985;rank=1 chr2 . exon 2425204 2426019 . - . ID=Thaps2985.1;Parent=Thaps2985;constitutive=1;rank=1 chr2 . repeat_region 2435790 2435797 . ? . description=dust chr2 ensembl protein_coding_gene 2437008 2437935 . - . ID=Thaps261595;biotype=protein_coding;description=Vascular plant-like leucine rich repeat transmembrane-like protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BVX6];external_name=Thaps261595;logic_name=jgi_thaps3 chr2 ensembl transcript 2437008 2437935 . - . ID=Thaps261595;Parent=Thaps261595;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2437008 2437141 . - 0 ID=Thaps261595;Parent=Thaps261595;rank=3 chr2 . exon 2437008 2437141 . - . ID=Thaps261595.3;Parent=Thaps261595;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2437216 2437452 . - 0 ID=Thaps261595;Parent=Thaps261595;rank=2 chr2 . exon 2437216 2437452 . - . ID=Thaps261595.2;Parent=Thaps261595;constitutive=1;rank=2 chr2 . CDS 2437633 2437935 . - 0 ID=Thaps261595;Parent=Thaps261595;rank=1 chr2 ensembl protein_coding_gene 2429916 2434945 . - . ID=Thaps2987;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVX4];external_name=Thaps2987;logic_name=jgi_thaps3 chr2 ensembl transcript 2429916 2434945 . - . ID=Thaps2987;Parent=Thaps2987;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2429916 2429963 . - 0 ID=Thaps2987;Parent=Thaps2987;rank=8 chr2 . exon 2429916 2429963 . - . ID=Thaps2987.8;Parent=Thaps2987;constitutive=1;rank=8 chr2 . CDS 2430116 2431276 . - 0 ID=Thaps2987;Parent=Thaps2987;rank=7 chr2 . exon 2430116 2431276 . - . ID=Thaps2987.7;Parent=Thaps2987;constitutive=1;rank=7 chr2 . CDS 2431450 2431562 . - 0 ID=Thaps2987;Parent=Thaps2987;rank=6 chr2 . exon 2431450 2431562 . - . ID=Thaps2987.6;Parent=Thaps2987;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 2431647 2431812 . - 0 ID=Thaps2987;Parent=Thaps2987;rank=5 chr2 . exon 2431647 2431812 . - . ID=Thaps2987.5;Parent=Thaps2987;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 2431888 2432657 . - 0 ID=Thaps2987;Parent=Thaps2987;rank=4 chr2 . exon 2431888 2432657 . - . ID=Thaps2987.4;Parent=Thaps2987;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2432682 2432738 . - 0 ID=Thaps2987;Parent=Thaps2987;rank=3 chr2 . exon 2432682 2432738 . - . ID=Thaps2987.3;Parent=Thaps2987;constitutive=1;rank=3 chr2 . CDS 2432780 2433336 . - 0 ID=Thaps2987;Parent=Thaps2987;rank=2 chr2 . exon 2432780 2433336 . - . ID=Thaps2987.2;Parent=Thaps2987;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2433447 2434945 . - 0 ID=Thaps2987;Parent=Thaps2987;rank=1 chr2 . exon 2433447 2434945 . - . ID=Thaps2987.1;Parent=Thaps2987;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2435127 2435722 . + . ID=Thaps2988;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVX5];external_name=Thaps2988;logic_name=jgi_thaps3 chr2 ensembl transcript 2435127 2435722 . + . ID=Thaps2988;Parent=Thaps2988;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2435127 2435256 . + 0 ID=Thaps2988;Parent=Thaps2988;rank=1 chr2 . exon 2435127 2435256 . + . ID=Thaps2988.1;Parent=Thaps2988;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2435351 2435367 . + 0 ID=Thaps2988;Parent=Thaps2988;rank=2 chr2 . exon 2435351 2435367 . + . ID=Thaps2988.2;Parent=Thaps2988;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2435498 2435722 . + 0 ID=Thaps2988;Parent=Thaps2988;rank=3 chr2 . exon 2435498 2435722 . + . ID=Thaps2988.3;Parent=Thaps2988;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 2429497 2429691 . + . ID=Thaps32480;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVX3];external_name=Thaps32480;logic_name=jgi_thaps3 chr2 ensembl transcript 2429497 2429691 . + . ID=Thaps32480;Parent=Thaps32480;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2429497 2429691 . + 0 ID=Thaps32480;Parent=Thaps32480;rank=1 chr2 . exon 2429497 2429691 . + . ID=Thaps32480.1;Parent=Thaps32480;constitutive=1;rank=1 chr2 . repeat_region 2446128 2446360 . ? . description=trf chr2 . repeat_region 2446283 2446308 . ? . description=trf chr2 . repeat_region 2447291 2447515 . ? . description=trf chr2 . exon 2437633 2437935 . - . ID=Thaps261595.1;Parent=Thaps261595;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2439188 2440924 . - . ID=Thaps2990;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVX7];external_name=Thaps2990;logic_name=jgi_thaps3 chr2 ensembl transcript 2439188 2440924 . - . ID=Thaps2990;Parent=Thaps2990;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2439188 2439484 . - 0 ID=Thaps2990;Parent=Thaps2990;rank=3 chr2 . exon 2439188 2439484 . - . ID=Thaps2990.3;Parent=Thaps2990;constitutive=1;rank=3 chr2 . CDS 2439589 2440057 . - 0 ID=Thaps2990;Parent=Thaps2990;rank=2 chr2 . exon 2439589 2440057 . - . ID=Thaps2990.2;Parent=Thaps2990;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2440137 2440924 . - 0 ID=Thaps2990;Parent=Thaps2990;rank=1 chr2 . exon 2440137 2440924 . - . ID=Thaps2990.1;Parent=Thaps2990;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2441342 2443716 . - . ID=Thaps2991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVX8];external_name=Thaps2991;logic_name=jgi_thaps3 chr2 ensembl transcript 2441342 2443716 . - . ID=Thaps2991;Parent=Thaps2991;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2441342 2442615 . - 0 ID=Thaps2991;Parent=Thaps2991;rank=2 chr2 . exon 2441342 2442615 . - . ID=Thaps2991.2;Parent=Thaps2991;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2442714 2443716 . - 0 ID=Thaps2991;Parent=Thaps2991;rank=1 chr2 . exon 2442714 2443716 . - . ID=Thaps2991.1;Parent=Thaps2991;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2445681 2447623 . - . ID=Thaps2992;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVY0];external_name=Thaps2992;logic_name=jgi_thaps3 chr2 ensembl transcript 2445681 2447623 . - . ID=Thaps2992;Parent=Thaps2992;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2445681 2446378 . - 0 ID=Thaps2992;Parent=Thaps2992;rank=3 chr2 . exon 2445681 2446378 . - . ID=Thaps2992.3;Parent=Thaps2992;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2446399 2446755 . - 0 ID=Thaps2992;Parent=Thaps2992;rank=2 chr2 . exon 2446399 2446755 . - . ID=Thaps2992.2;Parent=Thaps2992;constitutive=1;rank=2 chr2 . CDS 2446783 2447623 . - 0 ID=Thaps2992;Parent=Thaps2992;rank=1 chr2 . exon 2446783 2447623 . - . ID=Thaps2992.1;Parent=Thaps2992;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2444386 2445086 . + . ID=Thaps31758;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVX9];external_name=Thaps31758;logic_name=jgi_thaps3 chr2 ensembl transcript 2444386 2445086 . + . ID=Thaps31758;Parent=Thaps31758;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2444386 2444493 . + 0 ID=Thaps31758;Parent=Thaps31758;rank=1 chr2 . exon 2444386 2444493 . + . ID=Thaps31758.1;Parent=Thaps31758;constitutive=1;rank=1 chr2 . CDS 2444745 2445086 . + 0 ID=Thaps31758;Parent=Thaps31758;rank=2 chr2 . exon 2444745 2445086 . + . ID=Thaps31758.2;Parent=Thaps31758;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 2450515 2453914 . - . ID=Thaps21552;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVY2];external_name=Thaps21552;logic_name=jgi_thaps3 chr2 ensembl transcript 2450515 2453914 . - . ID=Thaps21552;Parent=Thaps21552;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2450515 2452332 . - 0 ID=Thaps21552;Parent=Thaps21552;rank=2 chr2 . exon 2450515 2452332 . - . ID=Thaps21552.2;Parent=Thaps21552;constitutive=1;rank=2 chr2 . CDS 2452412 2453914 . - 0 ID=Thaps21552;Parent=Thaps21552;rank=1 chr2 . exon 2452412 2453914 . - . ID=Thaps21552.1;Parent=Thaps21552;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2454158 2454613 . - . ID=Thaps21553;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVY3];external_name=Thaps21553;logic_name=jgi_thaps3 chr2 ensembl transcript 2454158 2454613 . - . ID=Thaps21553;Parent=Thaps21553;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2454158 2454613 . - 0 ID=Thaps21553;Parent=Thaps21553;rank=1 chr2 . exon 2454158 2454613 . - . ID=Thaps21553.1;Parent=Thaps21553;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2457144 2458787 . - . ID=Thaps21554;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVY5];external_name=Thaps21554;logic_name=jgi_thaps3 chr2 ensembl transcript 2457144 2458787 . - . ID=Thaps21554;Parent=Thaps21554;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2457144 2458787 . - 0 ID=Thaps21554;Parent=Thaps21554;rank=1 chr2 . exon 2457144 2458787 . - . ID=Thaps21554.1;Parent=Thaps21554;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2455469 2456632 . - . ID=Thaps2996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVY4];external_name=Thaps2996;logic_name=jgi_thaps3 chr2 ensembl transcript 2455469 2456632 . - . ID=Thaps2996;Parent=Thaps2996;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2455469 2456632 . - 0 ID=Thaps2996;Parent=Thaps2996;rank=1 chr2 . exon 2455469 2456632 . - . ID=Thaps2996.1;Parent=Thaps2996;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2449752 2450426 . + . ID=Thaps31783;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVY1];external_name=Thaps31783;logic_name=jgi_thaps3 chr2 ensembl transcript 2449752 2450426 . + . ID=Thaps31783;Parent=Thaps31783;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2449752 2449949 . + 0 ID=Thaps31783;Parent=Thaps31783;rank=1 chr2 . exon 2449752 2449949 . + . ID=Thaps31783.1;Parent=Thaps31783;constitutive=1;rank=1 chr2 . CDS 2449998 2450075 . + 0 ID=Thaps31783;Parent=Thaps31783;rank=2 chr2 . exon 2449998 2450075 . + . ID=Thaps31783.2;Parent=Thaps31783;constitutive=1;rank=2 chr2 . CDS 2450160 2450426 . + 0 ID=Thaps31783;Parent=Thaps31783;rank=3 chr2 . exon 2450160 2450426 . + . ID=Thaps31783.3;Parent=Thaps31783;constitutive=1;rank=3 chr2 . repeat_region 2458294 2458319 . ? . description=trf chr2 . repeat_region 2458735 2458767 . ? . description=trf chr2 ensembl protein_coding_gene 2460056 2462074 . - . ID=Thaps2999;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVY7];external_name=Thaps2999;logic_name=jgi_thaps3 chr2 ensembl transcript 2460056 2462074 . - . ID=Thaps2999;Parent=Thaps2999;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2460056 2462074 . - 0 ID=Thaps2999;Parent=Thaps2999;rank=1 chr2 . exon 2460056 2462074 . - . ID=Thaps2999.1;Parent=Thaps2999;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2464107 2466895 . + . ID=Thaps31803;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVY8];external_name=Thaps31803;logic_name=jgi_thaps3 chr2 ensembl transcript 2464107 2466895 . + . ID=Thaps31803;Parent=Thaps31803;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2464107 2464254 . + 0 ID=Thaps31803;Parent=Thaps31803;rank=1 chr2 . exon 2464107 2464254 . + . ID=Thaps31803.1;Parent=Thaps31803;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2464536 2465809 . + 0 ID=Thaps31803;Parent=Thaps31803;rank=2 chr2 . exon 2464536 2465809 . + . ID=Thaps31803.2;Parent=Thaps31803;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2465888 2466895 . + 0 ID=Thaps31803;Parent=Thaps31803;rank=3 chr2 . exon 2465888 2466895 . + . ID=Thaps31803.3;Parent=Thaps31803;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 2459216 2459659 . + . ID=Thaps39735;biotype=protein_coding;description=RL17A%2C ribosomal protein 27A 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BVY6];external_name=RL27A;logic_name=jgi_thaps3 chr2 ensembl transcript 2459216 2459659 . + . ID=Thaps39735;Parent=Thaps39735;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2459216 2459659 . + 0 ID=Thaps39735;Parent=Thaps39735;rank=1 chr2 . exon 2459216 2459659 . + . ID=Thaps39735.1;Parent=Thaps39735;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2474490 2477030 . + . ID=Thaps21557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ0];external_name=Thaps21557;logic_name=jgi_thaps3 chr2 ensembl transcript 2474490 2477030 . + . ID=Thaps21557;Parent=Thaps21557;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2474490 2477030 . + 0 ID=Thaps21557;Parent=Thaps21557;rank=1 chr2 . exon 2474490 2477030 . + . ID=Thaps21557.1;Parent=Thaps21557;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2477217 2479370 . - . ID=Thaps21558;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ1];external_name=Thaps21558;logic_name=jgi_thaps3 chr2 ensembl transcript 2477217 2479370 . - . ID=Thaps21558;Parent=Thaps21558;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2477217 2479370 . - 0 ID=Thaps21558;Parent=Thaps21558;rank=1 chr2 . exon 2477217 2479370 . - . ID=Thaps21558.1;Parent=Thaps21558;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2472113 2474200 . - . ID=Thaps3001;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVY9];external_name=Thaps3001;logic_name=jgi_thaps3 chr2 ensembl transcript 2472113 2474200 . - . ID=Thaps3001;Parent=Thaps3001;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2472113 2472472 . - 0 ID=Thaps3001;Parent=Thaps3001;rank=2 chr2 . exon 2472113 2472472 . - . ID=Thaps3001.2;Parent=Thaps3001;constitutive=1;rank=2 chr2 . CDS 2472557 2474200 . - 0 ID=Thaps3001;Parent=Thaps3001;rank=1 chr2 . exon 2472557 2474200 . - . ID=Thaps3001.1;Parent=Thaps3001;constitutive=1;rank=1 chr2 . repeat_region 2483075 2483125 . ? . description=dust chr2 ensembl protein_coding_gene 2480084 2482786 . + . ID=Thaps21559;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ2];external_name=Thaps21559;logic_name=jgi_thaps3 chr2 ensembl transcript 2480084 2482786 . + . ID=Thaps21559;Parent=Thaps21559;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2480084 2482786 . + 0 ID=Thaps21559;Parent=Thaps21559;rank=1 chr2 . exon 2480084 2482786 . + . ID=Thaps21559.1;Parent=Thaps21559;constitutive=1;rank=1 chr2 . repeat_region 2505928 2505935 . ? . description=dust chr2 ensembl protein_coding_gene 2504497 2505235 . + . ID=Thaps261601;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ3];external_name=Thaps261601;logic_name=jgi_thaps3 chr2 ensembl transcript 2504497 2505235 . + . ID=Thaps261601;Parent=Thaps261601;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2504497 2505235 . + 0 ID=Thaps261601;Parent=Thaps261601;rank=1 chr2 . exon 2504497 2505235 . + . ID=Thaps261601.1;Parent=Thaps261601;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2506125 2508194 . + . ID=Thaps3006;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ4];external_name=Thaps3006;logic_name=jgi_thaps3 chr2 ensembl transcript 2506125 2508194 . + . ID=Thaps3006;Parent=Thaps3006;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2506125 2508194 . + 0 ID=Thaps3006;Parent=Thaps3006;rank=1 chr2 . exon 2506125 2508194 . + . ID=Thaps3006.1;Parent=Thaps3006;constitutive=1;rank=1 chr2 . repeat_region 2510033 2510089 . ? . description=trf chr2 . repeat_region 2510674 2510696 . ? . description=trf chr2 . repeat_region 2511784 2511818 . ? . description=trf chr2 ensembl protein_coding_gene 2509942 2510346 . - . ID=Thaps19262;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ6];external_name=Thaps19262;logic_name=jgi_thaps3 chr2 ensembl transcript 2509942 2510346 . - . ID=Thaps19262;Parent=Thaps19262;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2509942 2510346 . - 0 ID=Thaps19262;Parent=Thaps19262;rank=1 chr2 . exon 2509942 2510346 . - . ID=Thaps19262.1;Parent=Thaps19262;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2515987 2517311 . - . ID=Thaps261602;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ8];external_name=Thaps261602;logic_name=jgi_thaps3 chr2 ensembl transcript 2515987 2517311 . - . ID=Thaps261602;Parent=Thaps261602;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2515987 2516336 . - 0 ID=Thaps261602;Parent=Thaps261602;rank=5 chr2 . exon 2515987 2516336 . - . ID=Thaps261602.5;Parent=Thaps261602;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 2516361 2516542 . - 0 ID=Thaps261602;Parent=Thaps261602;rank=4 chr2 . exon 2516361 2516542 . - . ID=Thaps261602.4;Parent=Thaps261602;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2516626 2516774 . - 0 ID=Thaps261602;Parent=Thaps261602;rank=3 chr2 . exon 2516626 2516774 . - . ID=Thaps261602.3;Parent=Thaps261602;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2516805 2517079 . - 0 ID=Thaps261602;Parent=Thaps261602;rank=2 chr2 . exon 2516805 2517079 . - . ID=Thaps261602.2;Parent=Thaps261602;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2517101 2517311 . - 0 ID=Thaps261602;Parent=Thaps261602;rank=1 chr2 . exon 2517101 2517311 . - . ID=Thaps261602.1;Parent=Thaps261602;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2508399 2509730 . + . ID=Thaps3007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ5];external_name=Thaps3007;logic_name=jgi_thaps3 chr2 ensembl transcript 2508399 2509730 . + . ID=Thaps3007;Parent=Thaps3007;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2508399 2509730 . + 0 ID=Thaps3007;Parent=Thaps3007;rank=1 chr2 . exon 2508399 2509730 . + . ID=Thaps3007.1;Parent=Thaps3007;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2511169 2515960 . + . ID=Thaps3009;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ7];external_name=Thaps3009;logic_name=jgi_thaps3 chr2 ensembl transcript 2511169 2515960 . + . ID=Thaps3009;Parent=Thaps3009;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2511169 2513451 . + 0 ID=Thaps3009;Parent=Thaps3009;rank=1 chr2 . exon 2511169 2513451 . + . ID=Thaps3009.1;Parent=Thaps3009;constitutive=1;rank=1 chr2 . CDS 2513523 2514216 . + 0 ID=Thaps3009;Parent=Thaps3009;rank=2 chr2 . exon 2513523 2514216 . + . ID=Thaps3009.2;Parent=Thaps3009;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2514286 2515776 . + 0 ID=Thaps3009;Parent=Thaps3009;rank=3 chr2 . exon 2514286 2515776 . + . ID=Thaps3009.3;Parent=Thaps3009;constitutive=1;rank=3 chr2 . CDS 2515848 2515960 . + 0 ID=Thaps3009;Parent=Thaps3009;rank=4 chr2 . exon 2515848 2515960 . + . ID=Thaps3009.4;Parent=Thaps3009;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . repeat_region 2518905 2518957 . ? . description=dust chr2 . repeat_region 2520380 2520394 . ? . description=dust chr2 . repeat_region 2524610 2524628 . ? . description=dust chr2 ensembl protein_coding_gene 2518723 2521630 . + . ID=Thaps3011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BVZ9];external_name=Thaps3011;logic_name=jgi_thaps3 chr2 ensembl transcript 2518723 2521630 . + . ID=Thaps3011;Parent=Thaps3011;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2518723 2519083 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=1 chr2 . exon 2518723 2519083 . + . ID=Thaps3011.1;Parent=Thaps3011;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2519457 2519476 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=2 chr2 . exon 2519457 2519476 . + . ID=Thaps3011.2;Parent=Thaps3011;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2519558 2519641 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=3 chr2 . exon 2519558 2519641 . + . ID=Thaps3011.3;Parent=Thaps3011;constitutive=1;rank=3 chr2 . CDS 2519727 2519738 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=4 chr2 . exon 2519727 2519738 . + . ID=Thaps3011.4;Parent=Thaps3011;constitutive=1;rank=4 chr2 . CDS 2519835 2519951 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=5 chr2 . exon 2519835 2519951 . + . ID=Thaps3011.5;Parent=Thaps3011;constitutive=1;rank=5 chr2 . CDS 2520044 2520085 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=6 chr2 . exon 2520044 2520085 . + . ID=Thaps3011.6;Parent=Thaps3011;constitutive=1;rank=6 chr2 . CDS 2520168 2520298 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=7 chr2 . exon 2520168 2520298 . + . ID=Thaps3011.7;Parent=Thaps3011;constitutive=1;ensembl_end_phase=2;rank=7 chr2 . CDS 2520368 2520393 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=8 chr2 . exon 2520368 2520393 . + . ID=Thaps3011.8;Parent=Thaps3011;constitutive=1;ensembl_end_phase=2;rank=8 chr2 . CDS 2520522 2521112 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=9 chr2 . exon 2520522 2521112 . + . ID=Thaps3011.9;Parent=Thaps3011;constitutive=1;rank=9 chr2 . CDS 2521233 2521630 . + 0 ID=Thaps3011;Parent=Thaps3011;rank=10 chr2 . exon 2521233 2521630 . + . ID=Thaps3011.10;Parent=Thaps3011;constitutive=1;ensembl_end_phase=2;rank=10 chr2 ensembl protein_coding_gene 2524484 2525117 . + . ID=Thaps3013;biotype=protein_coding;description=Ubiquitin carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW01];external_name=UBC;logic_name=jgi_thaps3 chr2 ensembl transcript 2524484 2525117 . + . ID=Thaps3013;Parent=Thaps3013;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2524484 2524526 . + 0 ID=Thaps3013;Parent=Thaps3013;rank=1 chr2 . exon 2524484 2524526 . + . ID=Thaps3013.1;Parent=Thaps3013;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2524657 2525117 . + 0 ID=Thaps3013;Parent=Thaps3013;rank=2 chr2 . exon 2524657 2525117 . + . ID=Thaps3013.2;Parent=Thaps3013;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 2522153 2523812 . - . ID=Thaps39740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW00];external_name=Thaps39740;logic_name=jgi_thaps3 chr2 ensembl transcript 2522153 2523812 . - . ID=Thaps39740;Parent=Thaps39740;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2522153 2522764 . - 0 ID=Thaps39740;Parent=Thaps39740;rank=5 chr2 . exon 2522153 2522764 . - . ID=Thaps39740.5;Parent=Thaps39740;constitutive=1;rank=5 chr2 . CDS 2522866 2522892 . - 0 ID=Thaps39740;Parent=Thaps39740;rank=4 chr2 . exon 2522866 2522892 . - . ID=Thaps39740.4;Parent=Thaps39740;constitutive=1;rank=4 chr2 . CDS 2523024 2523063 . - 0 ID=Thaps39740;Parent=Thaps39740;rank=3 chr2 . exon 2523024 2523063 . - . ID=Thaps39740.3;Parent=Thaps39740;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2523173 2523254 . - 0 ID=Thaps39740;Parent=Thaps39740;rank=2 chr2 . exon 2523173 2523254 . - . ID=Thaps39740.2;Parent=Thaps39740;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2523359 2523812 . - 0 ID=Thaps39740;Parent=Thaps39740;rank=1 chr2 . exon 2523359 2523812 . - . ID=Thaps39740.1;Parent=Thaps39740;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2525885 2527533 . + . ID=Thaps39741;biotype=protein_coding;description=Mu subunit of clathrin adaptor complex AP3 [Source:UniProtKB/TrEMBL%3BAcc:B8BW02];external_name=APM3;logic_name=jgi_thaps3 chr2 ensembl transcript 2525885 2527533 . + . ID=Thaps39741;Parent=Thaps39741;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2525885 2526020 . + 0 ID=Thaps39741;Parent=Thaps39741;rank=1 chr2 . exon 2525885 2526020 . + . ID=Thaps39741.1;Parent=Thaps39741;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2526189 2526511 . + 0 ID=Thaps39741;Parent=Thaps39741;rank=2 chr2 . exon 2526189 2526511 . + . ID=Thaps39741.2;Parent=Thaps39741;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2526583 2526964 . + 0 ID=Thaps39741;Parent=Thaps39741;rank=3 chr2 . exon 2526583 2526964 . + . ID=Thaps39741.3;Parent=Thaps39741;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2527091 2527533 . + 0 ID=Thaps39741;Parent=Thaps39741;rank=4 chr2 . exon 2527091 2527533 . + . ID=Thaps39741.4;Parent=Thaps39741;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . repeat_region 2529676 2529872 . + . description=Gypsy1ALTR_TP chr2 . repeat_region 2529873 2530830 . + . description=Gypsy1I_TP chr2 . repeat_region 2530820 2531011 . + . description=Gypsy1I_TP chr2 . repeat_region 2531038 2531230 . + . description=Gypsy1ALTR_TP chr2 ensembl protein_coding_gene 2531951 2532901 . - . ID=Thaps17314;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW04];external_name=Thaps17314;logic_name=jgi_thaps3 chr2 ensembl transcript 2531951 2532901 . - . ID=Thaps17314;Parent=Thaps17314;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2531951 2532342 . - 0 ID=Thaps17314;Parent=Thaps17314;rank=2 chr2 . exon 2531951 2532342 . - . ID=Thaps17314.2;Parent=Thaps17314;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2532556 2532901 . - 0 ID=Thaps17314;Parent=Thaps17314;rank=1 chr2 . exon 2532556 2532901 . - . ID=Thaps17314.1;Parent=Thaps17314;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2527649 2529496 . - . ID=Thaps21563;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW03];external_name=Thaps21563;logic_name=jgi_thaps3 chr2 ensembl transcript 2527649 2529496 . - . ID=Thaps21563;Parent=Thaps21563;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2527649 2529496 . - 0 ID=Thaps21563;Parent=Thaps21563;rank=1 chr2 . exon 2527649 2529496 . - . ID=Thaps21563.1;Parent=Thaps21563;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2534006 2534491 . - . ID=Thaps3017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW05];external_name=Thaps3017;logic_name=jgi_thaps3 chr2 ensembl transcript 2534006 2534491 . - . ID=Thaps3017;Parent=Thaps3017;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2534006 2534491 . - 0 ID=Thaps3017;Parent=Thaps3017;rank=1 chr2 . exon 2534006 2534491 . - . ID=Thaps3017.1;Parent=Thaps3017;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2535330 2537570 . + . ID=Thaps3018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW06];external_name=Thaps3018;logic_name=jgi_thaps3 chr2 ensembl transcript 2535330 2537570 . + . ID=Thaps3018;Parent=Thaps3018;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2535330 2535521 . + 0 ID=Thaps3018;Parent=Thaps3018;rank=1 chr2 . exon 2535330 2535521 . + . ID=Thaps3018.1;Parent=Thaps3018;constitutive=1;rank=1 chr2 . CDS 2535904 2537004 . + 0 ID=Thaps3018;Parent=Thaps3018;rank=2 chr2 . exon 2535904 2537004 . + . ID=Thaps3018.2;Parent=Thaps3018;constitutive=1;rank=2 chr2 . CDS 2537319 2537570 . + 0 ID=Thaps3018;Parent=Thaps3018;rank=3 chr2 . exon 2537319 2537570 . + . ID=Thaps3018.3;Parent=Thaps3018;constitutive=1;rank=3 chr2 . repeat_region 2542896 2542914 . ? . description=dust chr2 . repeat_region 2543016 2543562 . ? . description=trf chr2 . repeat_region 2543492 2543906 . ? . description=trf chr2 . repeat_region 2544341 2544383 . ? . description=trf chr2 . repeat_region 2545865 2545888 . ? . description=trf chr2 . biological_region 2546553 2546558 0.999 + . logic_name=eponine chr2 . biological_region 2546590 2546592 0.999 + . logic_name=eponine chr2 . repeat_region 2546880 2546888 . ? . description=dust chr2 ensembl protein_coding_gene 2542506 2544731 . - . ID=Thaps3020;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW08];external_name=Thaps3020;logic_name=jgi_thaps3 chr2 ensembl transcript 2542506 2544731 . - . ID=Thaps3020;Parent=Thaps3020;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2542506 2542751 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=11 chr2 . exon 2542506 2542751 . - . ID=Thaps3020.11;Parent=Thaps3020;constitutive=1;rank=11 chr2 . CDS 2542846 2542881 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=10 chr2 . exon 2542846 2542881 . - . ID=Thaps3020.10;Parent=Thaps3020;constitutive=1;rank=10 chr2 . CDS 2543018 2543152 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=9 chr2 . exon 2543018 2543152 . - . ID=Thaps3020.9;Parent=Thaps3020;constitutive=1;rank=9 chr2 . CDS 2543178 2543312 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=8 chr2 . exon 2543178 2543312 . - . ID=Thaps3020.8;Parent=Thaps3020;constitutive=1;rank=8 chr2 . CDS 2543338 2543472 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=7 chr2 . exon 2543338 2543472 . - . ID=Thaps3020.7;Parent=Thaps3020;constitutive=1;rank=7 chr2 . CDS 2543498 2543554 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=6 chr2 . exon 2543498 2543554 . - . ID=Thaps3020.6;Parent=Thaps3020;constitutive=1;rank=6 chr2 . CDS 2543673 2543729 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=5 chr2 . exon 2543673 2543729 . - . ID=Thaps3020.5;Parent=Thaps3020;constitutive=1;rank=5 chr2 . CDS 2543848 2543904 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=4 chr2 . exon 2543848 2543904 . - . ID=Thaps3020.4;Parent=Thaps3020;constitutive=1;rank=4 chr2 . CDS 2544011 2544064 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=3 chr2 . exon 2544011 2544064 . - . ID=Thaps3020.3;Parent=Thaps3020;constitutive=1;rank=3 chr2 . CDS 2544192 2544239 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=2 chr2 . exon 2544192 2544239 . - . ID=Thaps3020.2;Parent=Thaps3020;constitutive=1;rank=2 chr2 . CDS 2544336 2544731 . - 0 ID=Thaps3020;Parent=Thaps3020;rank=1 chr2 . exon 2544336 2544731 . - . ID=Thaps3020.1;Parent=Thaps3020;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2545151 2546782 . - . ID=Thaps3021;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW09];external_name=Thaps3021;logic_name=jgi_thaps3 chr2 ensembl transcript 2545151 2546782 . - . ID=Thaps3021;Parent=Thaps3021;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2545151 2545294 . - 0 ID=Thaps3021;Parent=Thaps3021;rank=2 chr2 . exon 2545151 2545294 . - . ID=Thaps3021.2;Parent=Thaps3021;constitutive=1;rank=2 chr2 . CDS 2545409 2546782 . - 0 ID=Thaps3021;Parent=Thaps3021;rank=1 chr2 . exon 2545409 2546782 . - . ID=Thaps3021.1;Parent=Thaps3021;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2547126 2554828 . + . ID=Thaps3022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW10];external_name=Thaps3022;logic_name=jgi_thaps3 chr2 ensembl transcript 2547126 2554828 . + . ID=Thaps3022;Parent=Thaps3022;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2547126 2547275 . + 0 ID=Thaps3022;Parent=Thaps3022;rank=1 chr2 . exon 2547126 2547275 . + . ID=Thaps3022.1;Parent=Thaps3022;constitutive=1;rank=1 chr2 . CDS 2547391 2547467 . + 0 ID=Thaps3022;Parent=Thaps3022;rank=2 chr2 . exon 2547391 2547467 . + . ID=Thaps3022.2;Parent=Thaps3022;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2547595 2551351 . + 0 ID=Thaps3022;Parent=Thaps3022;rank=3 chr2 . CDS 2551650 2552534 . + 0 ID=Thaps3022;Parent=Thaps3022;rank=4 chr2 . CDS 2552634 2553666 . + 0 ID=Thaps3022;Parent=Thaps3022;rank=5 chr2 . CDS 2554032 2554828 . + 0 ID=Thaps3022;Parent=Thaps3022;rank=6 chr2 ensembl protein_coding_gene 2539819 2541872 . + . ID=Thaps32477;biotype=protein_coding;description=Ornithine decarboxylase [Source:UniProtKB/TrEMBL%3BAcc:B8BW07];external_name=ODC1;logic_name=jgi_thaps3 chr2 ensembl transcript 2539819 2541872 . + . ID=Thaps32477;Parent=Thaps32477;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2539819 2540452 . + 0 ID=Thaps32477;Parent=Thaps32477;rank=1 chr2 . exon 2539819 2540452 . + . ID=Thaps32477.1;Parent=Thaps32477;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2540764 2540925 . + 0 ID=Thaps32477;Parent=Thaps32477;rank=2 chr2 . exon 2540764 2540925 . + . ID=Thaps32477.2;Parent=Thaps32477;constitutive=1;rank=2 chr2 . CDS 2541415 2541548 . + 0 ID=Thaps32477;Parent=Thaps32477;rank=3 chr2 . exon 2541415 2541548 . + . ID=Thaps32477.3;Parent=Thaps32477;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2541645 2541872 . + 0 ID=Thaps32477;Parent=Thaps32477;rank=4 chr2 . exon 2541645 2541872 . + . ID=Thaps32477.4;Parent=Thaps32477;constitutive=1;rank=4 chr2 ensembl protein_coding_gene 2555808 2556944 . - . ID=Thaps261606;biotype=protein_coding;description=Pas-domain protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW11];external_name=Thaps261606;logic_name=jgi_thaps3 chr2 ensembl transcript 2555808 2556944 . - . ID=Thaps261606;Parent=Thaps261606;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2555808 2556944 . - 0 ID=Thaps261606;Parent=Thaps261606;rank=1 chr2 . exon 2555808 2556944 . - . ID=Thaps261606.1;Parent=Thaps261606;constitutive=1;rank=1 chr2 . exon 2547595 2551351 . + . ID=Thaps3022.3;Parent=Thaps3022;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . exon 2551650 2552534 . + . ID=Thaps3022.4;Parent=Thaps3022;constitutive=1;rank=4 chr2 . exon 2552634 2553666 . + . ID=Thaps3022.5;Parent=Thaps3022;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . exon 2554032 2554828 . + . ID=Thaps3022.6;Parent=Thaps3022;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . biological_region 2561953 2561955 0.999 + . logic_name=eponine chr2 . biological_region 2561977 2561984 0.999 - . logic_name=eponine chr2 . repeat_region 2565427 2565463 . ? . description=trf chr2 ensembl protein_coding_gene 2565783 2569008 . - . ID=Thaps21568;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW14];external_name=Thaps21568;logic_name=jgi_thaps3 chr2 ensembl transcript 2565783 2569008 . - . ID=Thaps21568;Parent=Thaps21568;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2565783 2568133 . - 0 ID=Thaps21568;Parent=Thaps21568;rank=2 chr2 . exon 2565783 2568133 . - . ID=Thaps21568.2;Parent=Thaps21568;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2568225 2569008 . - 0 ID=Thaps21568;Parent=Thaps21568;rank=1 chr2 ensembl protein_coding_gene 2561655 2562747 . + . ID=Thaps261607;biotype=protein_coding;description=Eukaryotic translation initiation factor 4E [Source:UniProtKB/TrEMBL%3BAcc:B8BW12];external_name=Thaps261607;logic_name=jgi_thaps3 chr2 ensembl transcript 2561655 2562747 . + . ID=Thaps261607;Parent=Thaps261607;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2561655 2561670 . + 0 ID=Thaps261607;Parent=Thaps261607;rank=1 chr2 . exon 2561655 2561670 . + . ID=Thaps261607.1;Parent=Thaps261607;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2562254 2562390 . + 0 ID=Thaps261607;Parent=Thaps261607;rank=2 chr2 . exon 2562254 2562390 . + . ID=Thaps261607.2;Parent=Thaps261607;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2562439 2562747 . + 0 ID=Thaps261607;Parent=Thaps261607;rank=3 chr2 . exon 2562439 2562747 . + . ID=Thaps261607.3;Parent=Thaps261607;constitutive=1;rank=3 chr2 ensembl protein_coding_gene 2563638 2565647 . + . ID=Thaps3026;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW13];external_name=Thaps3026;logic_name=jgi_thaps3 chr2 ensembl transcript 2563638 2565647 . + . ID=Thaps3026;Parent=Thaps3026;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2563638 2563783 . + 0 ID=Thaps3026;Parent=Thaps3026;rank=1 chr2 . exon 2563638 2563783 . + . ID=Thaps3026.1;Parent=Thaps3026;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 2563877 2564908 . + 0 ID=Thaps3026;Parent=Thaps3026;rank=2 chr2 . exon 2563877 2564908 . + . ID=Thaps3026.2;Parent=Thaps3026;constitutive=1;rank=2 chr2 . CDS 2564981 2565647 . + 0 ID=Thaps3026;Parent=Thaps3026;rank=3 chr2 . exon 2564981 2565647 . + . ID=Thaps3026.3;Parent=Thaps3026;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . repeat_region 2568222 2568285 . ? . description=dust chr2 . repeat_region 2569440 2569448 . ? . description=dust chr2 . repeat_region 2577041 2577664 . - . description=tp16_ASNotSingleton chr2 ensembl protein_coding_gene 2571686 2572801 . - . ID=Thaps14979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW16];external_name=Thaps14979;logic_name=jgi_thaps3 chr2 ensembl transcript 2571686 2572801 . - . ID=Thaps14979;Parent=Thaps14979;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2571686 2572801 . - 0 ID=Thaps14979;Parent=Thaps14979;rank=1 chr2 . exon 2571686 2572801 . - . ID=Thaps14979.1;Parent=Thaps14979;constitutive=1;rank=1 chr2 . exon 2568225 2569008 . - . ID=Thaps21568.1;Parent=Thaps21568;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2569702 2570376 . + . ID=Thaps261608;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW15];external_name=Thaps261608;logic_name=jgi_thaps3 chr2 ensembl transcript 2569702 2570376 . + . ID=Thaps261608;Parent=Thaps261608;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2569702 2570376 . + 0 ID=Thaps261608;Parent=Thaps261608;rank=1 chr2 . exon 2569702 2570376 . + . ID=Thaps261608.1;Parent=Thaps261608;constitutive=1;rank=1 chr2 . repeat_region 2577783 2578438 . - . description=scaffold_32_80_4_242182_244563 chr2 . repeat_region 2581034 2581073 . ? . description=trf chr2 . biological_region 2583855 2583857 0.999 - . logic_name=eponine chr2 ensembl protein_coding_gene 2582671 2583339 . - . ID=Thaps17946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW18];external_name=Thaps17946;logic_name=jgi_thaps3 chr2 ensembl transcript 2582671 2583339 . - . ID=Thaps17946;Parent=Thaps17946;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2582671 2583339 . - 0 ID=Thaps17946;Parent=Thaps17946;rank=1 chr2 . exon 2582671 2583339 . - . ID=Thaps17946.1;Parent=Thaps17946;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2578434 2581855 . - . ID=Thaps3030;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW17];external_name=Thaps3030;logic_name=jgi_thaps3 chr2 ensembl transcript 2578434 2581855 . - . ID=Thaps3030;Parent=Thaps3030;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2578434 2578445 . - 0 ID=Thaps3030;Parent=Thaps3030;rank=2 chr2 . exon 2578434 2578445 . - . ID=Thaps3030.2;Parent=Thaps3030;constitutive=1;rank=2 chr2 . CDS 2578472 2581855 . - 0 ID=Thaps3030;Parent=Thaps3030;rank=1 chr2 . exon 2578472 2581855 . - . ID=Thaps3030.1;Parent=Thaps3030;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2584013 2585285 . - . ID=Thaps3032;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW19];external_name=Thaps3032;logic_name=jgi_thaps3 chr2 ensembl transcript 2584013 2585285 . - . ID=Thaps3032;Parent=Thaps3032;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2584013 2584404 . - 0 ID=Thaps3032;Parent=Thaps3032;rank=4 chr2 . exon 2584013 2584404 . - . ID=Thaps3032.4;Parent=Thaps3032;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2584522 2584903 . - 0 ID=Thaps3032;Parent=Thaps3032;rank=3 chr2 . exon 2584522 2584903 . - . ID=Thaps3032.3;Parent=Thaps3032;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2585045 2585046 . - 0 ID=Thaps3032;Parent=Thaps3032;rank=2 chr2 . exon 2585045 2585046 . - . ID=Thaps3032.2;Parent=Thaps3032;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2585150 2585285 . - 0 ID=Thaps3032;Parent=Thaps3032;rank=1 chr2 . exon 2585150 2585285 . - . ID=Thaps3032.1;Parent=Thaps3032;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2586163 2587674 . - . ID=Thaps39754;biotype=protein_coding;description=Thioredoxin reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BW20];external_name=TRXR1;logic_name=jgi_thaps3 chr2 ensembl transcript 2586163 2587674 . - . ID=Thaps39754;Parent=Thaps39754;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2586163 2587674 . - 0 ID=Thaps39754;Parent=Thaps39754;rank=1 chr2 . exon 2586163 2587674 . - . ID=Thaps39754.1;Parent=Thaps39754;constitutive=1;rank=1 chr2 ensembl gene 2594675 2596687 . + . ID=Thaps261610;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr2 ensembl transcript 2594675 2596687 . + . ID=Thaps261610;Parent=Thaps261610;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr2 . exon 2594675 2594818 . + . ID=Thaps261610.1;Parent=Thaps261610;constitutive=1;rank=1 chr2 . exon 2596416 2596687 . + . ID=Thaps261610.2;Parent=Thaps261610;constitutive=1;ensembl_end_phase=2;rank=2 chr2 ensembl protein_coding_gene 2588421 2589763 . - . ID=Thaps3034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW21];external_name=Thaps3034;logic_name=jgi_thaps3 chr2 ensembl transcript 2588421 2589763 . - . ID=Thaps3034;Parent=Thaps3034;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2588421 2589350 . - 0 ID=Thaps3034;Parent=Thaps3034;rank=2 chr2 . exon 2588421 2589350 . - . ID=Thaps3034.2;Parent=Thaps3034;constitutive=1;rank=2 chr2 . CDS 2589461 2589763 . - 0 ID=Thaps3034;Parent=Thaps3034;rank=1 chr2 . exon 2589461 2589763 . - . ID=Thaps3034.1;Parent=Thaps3034;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2590042 2591034 . - . ID=Thaps3035;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW22];external_name=Thaps3035;logic_name=jgi_thaps3 chr2 ensembl transcript 2590042 2591034 . - . ID=Thaps3035;Parent=Thaps3035;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2590042 2590360 . - 0 ID=Thaps3035;Parent=Thaps3035;rank=2 chr2 . exon 2590042 2590360 . - . ID=Thaps3035.2;Parent=Thaps3035;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2590442 2591034 . - 0 ID=Thaps3035;Parent=Thaps3035;rank=1 chr2 . exon 2590442 2591034 . - . ID=Thaps3035.1;Parent=Thaps3035;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2591510 2592646 . - . ID=Thaps3036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW23];external_name=Thaps3036;logic_name=jgi_thaps3 chr2 ensembl transcript 2591510 2592646 . - . ID=Thaps3036;Parent=Thaps3036;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2591510 2592646 . - 0 ID=Thaps3036;Parent=Thaps3036;rank=1 chr2 . exon 2591510 2592646 . - . ID=Thaps3036.1;Parent=Thaps3036;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2593491 2594179 . + . ID=Thaps3037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW24];external_name=Thaps3037;logic_name=jgi_thaps3 chr2 ensembl transcript 2593491 2594179 . + . ID=Thaps3037;Parent=Thaps3037;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2593491 2594069 . + 0 ID=Thaps3037;Parent=Thaps3037;rank=1 chr2 . exon 2593491 2594069 . + . ID=Thaps3037.1;Parent=Thaps3037;constitutive=1;rank=1 chr2 . CDS 2594120 2594179 . + 0 ID=Thaps3037;Parent=Thaps3037;rank=2 chr2 . exon 2594120 2594179 . + . ID=Thaps3037.2;Parent=Thaps3037;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 2596723 2597325 . + . ID=Thaps3038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW25];external_name=Thaps3038;logic_name=jgi_thaps3 chr2 ensembl transcript 2596723 2597325 . + . ID=Thaps3038;Parent=Thaps3038;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2596723 2597325 . + 0 ID=Thaps3038;Parent=Thaps3038;rank=1 chr2 . exon 2596723 2597325 . + . ID=Thaps3038.1;Parent=Thaps3038;constitutive=1;rank=1 chr2 . repeat_region 2600883 2600907 . ? . description=dust chr2 . repeat_region 2607229 2607278 . ? . description=dust chr2 . repeat_region 2607233 2607278 . ? . description=trf chr2 . repeat_region 2607239 2607278 . ? . description=trf chr2 ensembl protein_coding_gene 2601561 2602092 . + . ID=Thaps19311;biotype=protein_coding;description=6%2C7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BW28];external_name=Thaps19311;logic_name=jgi_thaps3 chr2 ensembl transcript 2601561 2602092 . + . ID=Thaps19311;Parent=Thaps19311;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2601561 2601650 . + 0 ID=Thaps19311;Parent=Thaps19311;rank=1 chr2 . exon 2601561 2601650 . + . ID=Thaps19311.1;Parent=Thaps19311;constitutive=1;rank=1 chr2 . CDS 2601754 2602092 . + 0 ID=Thaps19311;Parent=Thaps19311;rank=2 chr2 . exon 2601754 2602092 . + . ID=Thaps19311.2;Parent=Thaps19311;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 2602617 2604236 . - . ID=Thaps268398;biotype=protein_coding;description=Glycyl tRNA synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BW29];external_name=Thaps268398;logic_name=jgi_thaps3 chr2 ensembl transcript 2602617 2604236 . - . ID=Thaps268398;Parent=Thaps268398;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2602617 2603083 . - 0 ID=Thaps268398;Parent=Thaps268398;rank=3 chr2 . exon 2602617 2603083 . - . ID=Thaps268398.3;Parent=Thaps268398;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2603204 2603819 . - 0 ID=Thaps268398;Parent=Thaps268398;rank=2 chr2 . exon 2603204 2603819 . - . ID=Thaps268398.2;Parent=Thaps268398;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2603931 2604236 . - 0 ID=Thaps268398;Parent=Thaps268398;rank=1 chr2 . exon 2603931 2604236 . - . ID=Thaps268398.1;Parent=Thaps268398;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2599261 2600264 . - . ID=Thaps3040;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW27];external_name=Thaps3040;logic_name=jgi_thaps3 chr2 ensembl transcript 2599261 2600264 . - . ID=Thaps3040;Parent=Thaps3040;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2599261 2599499 . - 0 ID=Thaps3040;Parent=Thaps3040;rank=4 chr2 . exon 2599261 2599499 . - . ID=Thaps3040.4;Parent=Thaps3040;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2599536 2599632 . - 0 ID=Thaps3040;Parent=Thaps3040;rank=3 chr2 . exon 2599536 2599632 . - . ID=Thaps3040.3;Parent=Thaps3040;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2599728 2599883 . - 0 ID=Thaps3040;Parent=Thaps3040;rank=2 chr2 . exon 2599728 2599883 . - . ID=Thaps3040.2;Parent=Thaps3040;constitutive=1;rank=2 chr2 . CDS 2599974 2600264 . - 0 ID=Thaps3040;Parent=Thaps3040;rank=1 chr2 . exon 2599974 2600264 . - . ID=Thaps3040.1;Parent=Thaps3040;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2604613 2606421 . - . ID=Thaps3043;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW30];external_name=Thaps3043;logic_name=jgi_thaps3 chr2 ensembl transcript 2604613 2606421 . - . ID=Thaps3043;Parent=Thaps3043;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2604613 2606421 . - 0 ID=Thaps3043;Parent=Thaps3043;rank=1 chr2 . exon 2604613 2606421 . - . ID=Thaps3043.1;Parent=Thaps3043;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2597675 2598931 . + . ID=Thaps32098;biotype=protein_coding;description=Histone deacetylase [Source:UniProtKB/TrEMBL%3BAcc:B8BW26];external_name=Thaps32098;logic_name=jgi_thaps3 chr2 ensembl transcript 2597675 2598931 . + . ID=Thaps32098;Parent=Thaps32098;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2597675 2598931 . + 0 ID=Thaps32098;Parent=Thaps32098;rank=1 chr2 . exon 2597675 2598931 . + . ID=Thaps32098.1;Parent=Thaps32098;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2609190 2609666 . - . ID=Thaps261613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW31];external_name=Thaps261613;logic_name=jgi_thaps3 chr2 ensembl transcript 2609190 2609666 . - . ID=Thaps261613;Parent=Thaps261613;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2609190 2609468 . - 0 ID=Thaps261613;Parent=Thaps261613;rank=2 chr2 . exon 2609190 2609468 . - . ID=Thaps261613.2;Parent=Thaps261613;constitutive=1;rank=2 chr2 . CDS 2609511 2609666 . - 0 ID=Thaps261613;Parent=Thaps261613;rank=1 chr2 . exon 2609511 2609666 . - . ID=Thaps261613.1;Parent=Thaps261613;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2614532 2615008 . + . ID=Thaps261614;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW32];external_name=Thaps261614;logic_name=jgi_thaps3 chr2 ensembl transcript 2614532 2615008 . + . ID=Thaps261614;Parent=Thaps261614;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2614532 2614687 . + 0 ID=Thaps261614;Parent=Thaps261614;rank=1 chr2 . exon 2614532 2614687 . + . ID=Thaps261614.1;Parent=Thaps261614;constitutive=1;rank=1 chr2 . CDS 2614730 2615008 . + 0 ID=Thaps261614;Parent=Thaps261614;rank=2 chr2 . exon 2614730 2615008 . + . ID=Thaps261614.2;Parent=Thaps261614;constitutive=1;rank=2 chr2 ensembl gene 2617281 2618158 . - . ID=Thaps261615;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr2 ensembl transcript 2617281 2618158 . - . ID=Thaps261615;Parent=Thaps261615;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr2 . exon 2617281 2617968 . - . ID=Thaps261615.2;Parent=Thaps261615;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . repeat_region 2618720 2618738 . ? . description=dust chr2 . repeat_region 2620238 2620263 . ? . description=trf chr2 . repeat_region 2624690 2624759 . ? . description=trf chr2 . repeat_region 2625194 2625240 . ? . description=trf chr2 . repeat_region 2625556 2625575 . ? . description=trf chr2 . repeat_region 2625556 2625575 . ? . description=dust chr2 . repeat_region 2625716 2625757 . ? . description=dust chr2 . repeat_region 2625717 2625745 . ? . description=trf chr2 ensembl protein_coding_gene 2624155 2626848 . - . ID=Thaps21576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW34];external_name=Thaps21576;logic_name=jgi_thaps3 chr2 ensembl transcript 2624155 2626848 . - . ID=Thaps21576;Parent=Thaps21576;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2624155 2624355 . - 0 ID=Thaps21576;Parent=Thaps21576;rank=4 chr2 . exon 2624155 2624355 . - . ID=Thaps21576.4;Parent=Thaps21576;constitutive=1;rank=4 chr2 . CDS 2624404 2624517 . - 0 ID=Thaps21576;Parent=Thaps21576;rank=3 chr2 . exon 2624404 2624517 . - . ID=Thaps21576.3;Parent=Thaps21576;constitutive=1;rank=3 chr2 . CDS 2624570 2626654 . - 0 ID=Thaps21576;Parent=Thaps21576;rank=2 chr2 . exon 2624570 2626654 . - . ID=Thaps21576.2;Parent=Thaps21576;constitutive=1;rank=2 chr2 . CDS 2626747 2626848 . - 0 ID=Thaps21576;Parent=Thaps21576;rank=1 chr2 . exon 2626747 2626848 . - . ID=Thaps21576.1;Parent=Thaps21576;constitutive=1;rank=1 chr2 . exon 2618020 2618158 . - . ID=Thaps261615.1;Parent=Thaps261615;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2620402 2623921 . + . ID=Thaps3047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW33];external_name=Thaps3047;logic_name=jgi_thaps3 chr2 ensembl transcript 2620402 2623921 . + . ID=Thaps3047;Parent=Thaps3047;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2620402 2622252 . + 0 ID=Thaps3047;Parent=Thaps3047;rank=1 chr2 . exon 2620402 2622252 . + . ID=Thaps3047.1;Parent=Thaps3047;constitutive=1;rank=1 chr2 . CDS 2622567 2622891 . + 0 ID=Thaps3047;Parent=Thaps3047;rank=2 chr2 . exon 2622567 2622891 . + . ID=Thaps3047.2;Parent=Thaps3047;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2623011 2623115 . + 0 ID=Thaps3047;Parent=Thaps3047;rank=3 chr2 . exon 2623011 2623115 . + . ID=Thaps3047.3;Parent=Thaps3047;constitutive=1;rank=3 chr2 . CDS 2623185 2623402 . + 0 ID=Thaps3047;Parent=Thaps3047;rank=4 chr2 . exon 2623185 2623402 . + . ID=Thaps3047.4;Parent=Thaps3047;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2623466 2623921 . + 0 ID=Thaps3047;Parent=Thaps3047;rank=5 chr2 . exon 2623466 2623921 . + . ID=Thaps3047.5;Parent=Thaps3047;constitutive=1;rank=5 chr2 ensembl protein_coding_gene 2630869 2631036 . + . ID=Thaps27318;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW37];external_name=Thaps27318;logic_name=jgi_thaps3 chr2 ensembl transcript 2630869 2631036 . + . ID=Thaps27318;Parent=Thaps27318;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2630869 2631036 . + 0 ID=Thaps27318;Parent=Thaps27318;rank=1 chr2 . exon 2630869 2631036 . + . ID=Thaps27318.1;Parent=Thaps27318;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2628539 2629822 . + . ID=Thaps3049;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW35];external_name=Thaps3049;logic_name=jgi_thaps3 chr2 ensembl transcript 2628539 2629822 . + . ID=Thaps3049;Parent=Thaps3049;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2628539 2629822 . + 0 ID=Thaps3049;Parent=Thaps3049;rank=1 chr2 . exon 2628539 2629822 . + . ID=Thaps3049.1;Parent=Thaps3049;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2631997 2633098 . - . ID=Thaps3051;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW38];external_name=Thaps3051;logic_name=jgi_thaps3 chr2 ensembl transcript 2631997 2633098 . - . ID=Thaps3051;Parent=Thaps3051;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2631997 2632713 . - 0 ID=Thaps3051;Parent=Thaps3051;rank=2 chr2 . exon 2631997 2632713 . - . ID=Thaps3051.2;Parent=Thaps3051;constitutive=1;rank=2 chr2 . CDS 2632907 2633098 . - 0 ID=Thaps3051;Parent=Thaps3051;rank=1 chr2 . exon 2632907 2633098 . - . ID=Thaps3051.1;Parent=Thaps3051;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2633784 2634766 . + . ID=Thaps3052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW39];external_name=Thaps3052;logic_name=jgi_thaps3 chr2 ensembl transcript 2633784 2634766 . + . ID=Thaps3052;Parent=Thaps3052;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2633784 2634149 . + 0 ID=Thaps3052;Parent=Thaps3052;rank=1 chr2 . exon 2633784 2634149 . + . ID=Thaps3052.1;Parent=Thaps3052;constitutive=1;rank=1 chr2 . CDS 2634284 2634766 . + 0 ID=Thaps3052;Parent=Thaps3052;rank=2 chr2 . exon 2634284 2634766 . + . ID=Thaps3052.2;Parent=Thaps3052;constitutive=1;rank=2 chr2 ensembl protein_coding_gene 2630403 2630741 . + . ID=Thaps31859;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW36];external_name=Thaps31859;logic_name=jgi_thaps3 chr2 ensembl transcript 2630403 2630741 . + . ID=Thaps31859;Parent=Thaps31859;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2630403 2630741 . + 0 ID=Thaps31859;Parent=Thaps31859;rank=1 chr2 . exon 2630403 2630741 . + . ID=Thaps31859.1;Parent=Thaps31859;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2634958 2636106 . - . ID=Thaps31875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW40];external_name=Thaps31875;logic_name=jgi_thaps3 chr2 ensembl transcript 2634958 2636106 . - . ID=Thaps31875;Parent=Thaps31875;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2634958 2635747 . - 0 ID=Thaps31875;Parent=Thaps31875;rank=2 chr2 . exon 2634958 2635747 . - . ID=Thaps31875.2;Parent=Thaps31875;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2635853 2636106 . - 0 ID=Thaps31875;Parent=Thaps31875;rank=1 chr2 . exon 2635853 2636106 . - . ID=Thaps31875.1;Parent=Thaps31875;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 2638535 2638579 . ? . description=trf chr2 . repeat_region 2640151 2640230 . ? . description=trf chr2 . repeat_region 2641873 2642049 . - . description=scaffold_15_62_1_184226_186508 chr2 . repeat_region 2642470 2642598 . - . description=scaffold_15_62_1_184226_186508 chr2 . repeat_region 2646217 2646275 . ? . description=dust chr2 . repeat_region 2646783 2646809 . ? . description=trf chr2 ensembl protein_coding_gene 2638757 2640134 . + . ID=Thaps3054;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW41];external_name=Thaps3054;logic_name=jgi_thaps3 chr2 ensembl transcript 2638757 2640134 . + . ID=Thaps3054;Parent=Thaps3054;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2638757 2638952 . + 0 ID=Thaps3054;Parent=Thaps3054;rank=1 chr2 . exon 2638757 2638952 . + . ID=Thaps3054.1;Parent=Thaps3054;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2639024 2639255 . + 0 ID=Thaps3054;Parent=Thaps3054;rank=2 chr2 . exon 2639024 2639255 . + . ID=Thaps3054.2;Parent=Thaps3054;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2639387 2640134 . + 0 ID=Thaps3054;Parent=Thaps3054;rank=3 chr2 . exon 2639387 2640134 . + . ID=Thaps3054.3;Parent=Thaps3054;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 2640828 2641460 . + . ID=Thaps3055;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW42];external_name=Thaps3055;logic_name=jgi_thaps3 chr2 ensembl transcript 2640828 2641460 . + . ID=Thaps3055;Parent=Thaps3055;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2640828 2640986 . + 0 ID=Thaps3055;Parent=Thaps3055;rank=1 chr2 . exon 2640828 2640986 . + . ID=Thaps3055.1;Parent=Thaps3055;constitutive=1;rank=1 chr2 . CDS 2641015 2641039 . + 0 ID=Thaps3055;Parent=Thaps3055;rank=2 chr2 . exon 2641015 2641039 . + . ID=Thaps3055.2;Parent=Thaps3055;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2641114 2641460 . + 0 ID=Thaps3055;Parent=Thaps3055;rank=3 chr2 . exon 2641114 2641460 . + . ID=Thaps3055.3;Parent=Thaps3055;constitutive=1;ensembl_end_phase=2;rank=3 chr2 ensembl protein_coding_gene 2641707 2644607 . - . ID=Thaps3056;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW43];external_name=Thaps3056;logic_name=jgi_thaps3 chr2 ensembl transcript 2641707 2644607 . - . ID=Thaps3056;Parent=Thaps3056;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2641707 2641827 . - 0 ID=Thaps3056;Parent=Thaps3056;rank=3 chr2 . exon 2641707 2641827 . - . ID=Thaps3056.3;Parent=Thaps3056;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2642122 2642449 . - 0 ID=Thaps3056;Parent=Thaps3056;rank=2 chr2 . exon 2642122 2642449 . - . ID=Thaps3056.2;Parent=Thaps3056;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2642855 2644607 . - 0 ID=Thaps3056;Parent=Thaps3056;rank=1 chr2 . exon 2642855 2644607 . - . ID=Thaps3056.1;Parent=Thaps3056;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2645431 2646828 . + . ID=Thaps3057;biotype=protein_coding;description=Carbamate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BW44];external_name=Thaps3057;logic_name=jgi_thaps3 chr2 ensembl transcript 2645431 2646828 . + . ID=Thaps3057;Parent=Thaps3057;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2645431 2645735 . + 0 ID=Thaps3057;Parent=Thaps3057;rank=1 chr2 . exon 2645431 2645735 . + . ID=Thaps3057.1;Parent=Thaps3057;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . CDS 2645850 2646113 . + 0 ID=Thaps3057;Parent=Thaps3057;rank=2 chr2 . exon 2645850 2646113 . + . ID=Thaps3057.2;Parent=Thaps3057;constitutive=1;rank=2 chr2 . CDS 2646285 2646828 . + 0 ID=Thaps3057;Parent=Thaps3057;rank=3 chr2 . exon 2646285 2646828 . + . ID=Thaps3057.3;Parent=Thaps3057;constitutive=1;ensembl_end_phase=1;rank=3 chr2 ensembl protein_coding_gene 2649862 2650444 . - . ID=Thaps268403;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW46];external_name=Thaps268403;logic_name=jgi_thaps3 chr2 ensembl transcript 2649862 2650444 . - . ID=Thaps268403;Parent=Thaps268403;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2649862 2649954 . - 0 ID=Thaps268403;Parent=Thaps268403;rank=4 chr2 . exon 2649862 2649954 . - . ID=Thaps268403.4;Parent=Thaps268403;constitutive=1;rank=4 chr2 . CDS 2650022 2650227 . - 0 ID=Thaps268403;Parent=Thaps268403;rank=3 chr2 . exon 2650022 2650227 . - . ID=Thaps268403.3;Parent=Thaps268403;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2650243 2650302 . - 0 ID=Thaps268403;Parent=Thaps268403;rank=2 chr2 . exon 2650243 2650302 . - . ID=Thaps268403.2;Parent=Thaps268403;constitutive=1;rank=2 chr2 . CDS 2650342 2650444 . - 0 ID=Thaps268403;Parent=Thaps268403;rank=1 chr2 . exon 2650342 2650444 . - . ID=Thaps268403.1;Parent=Thaps268403;constitutive=1;ensembl_end_phase=1;rank=1 chr2 ensembl protein_coding_gene 2653509 2656014 . + . ID=Thaps268404;biotype=protein_coding;description=DNA ligase [Source:UniProtKB/TrEMBL%3BAcc:B8BW47];external_name=LIG1;logic_name=jgi_thaps3 chr2 ensembl transcript 2653509 2656014 . + . ID=Thaps268404;Parent=Thaps268404;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2653509 2653545 . + 0 ID=Thaps268404;Parent=Thaps268404;rank=1 chr2 . exon 2653509 2653545 . + . ID=Thaps268404.1;Parent=Thaps268404;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2653627 2653849 . + 0 ID=Thaps268404;Parent=Thaps268404;rank=2 chr2 . exon 2653627 2653849 . + . ID=Thaps268404.2;Parent=Thaps268404;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2653865 2653916 . + 0 ID=Thaps268404;Parent=Thaps268404;rank=3 chr2 . exon 2653865 2653916 . + . ID=Thaps268404.3;Parent=Thaps268404;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2654012 2654261 . + 0 ID=Thaps268404;Parent=Thaps268404;rank=4 chr2 . exon 2654012 2654261 . + . ID=Thaps268404.4;Parent=Thaps268404;constitutive=1;ensembl_end_phase=1;rank=4 chr2 . CDS 2654349 2654647 . + 0 ID=Thaps268404;Parent=Thaps268404;rank=5 chr2 . exon 2654349 2654647 . + . ID=Thaps268404.5;Parent=Thaps268404;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 2654731 2654760 . + 0 ID=Thaps268404;Parent=Thaps268404;rank=6 chr2 . exon 2654731 2654760 . + . ID=Thaps268404.6;Parent=Thaps268404;constitutive=1;rank=6 chr2 . CDS 2654843 2655171 . + 0 ID=Thaps268404;Parent=Thaps268404;rank=7 chr2 . exon 2654843 2655171 . + . ID=Thaps268404.7;Parent=Thaps268404;constitutive=1;ensembl_end_phase=2;rank=7 chr2 . CDS 2655255 2655475 . + 0 ID=Thaps268404;Parent=Thaps268404;rank=8 chr2 . exon 2655255 2655475 . + . ID=Thaps268404.8;Parent=Thaps268404;constitutive=1;ensembl_end_phase=2;rank=8 chr2 . CDS 2655554 2656014 . + 0 ID=Thaps268404;Parent=Thaps268404;rank=9 chr2 . exon 2655554 2656014 . + . ID=Thaps268404.9;Parent=Thaps268404;constitutive=1;ensembl_end_phase=2;rank=9 chr2 ensembl protein_coding_gene 2647426 2648728 . - . ID=Thaps3058;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW45];external_name=Thaps3058;logic_name=jgi_thaps3 chr2 ensembl transcript 2647426 2648728 . - . ID=Thaps3058;Parent=Thaps3058;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2647426 2647754 . - 0 ID=Thaps3058;Parent=Thaps3058;rank=4 chr2 . exon 2647426 2647754 . - . ID=Thaps3058.4;Parent=Thaps3058;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2647915 2648037 . - 0 ID=Thaps3058;Parent=Thaps3058;rank=3 chr2 . exon 2647915 2648037 . - . ID=Thaps3058.3;Parent=Thaps3058;constitutive=1;rank=3 chr2 . CDS 2648119 2648537 . - 0 ID=Thaps3058;Parent=Thaps3058;rank=2 chr2 . exon 2648119 2648537 . - . ID=Thaps3058.2;Parent=Thaps3058;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . CDS 2648583 2648728 . - 0 ID=Thaps3058;Parent=Thaps3058;rank=1 chr2 . exon 2648583 2648728 . - . ID=Thaps3058.1;Parent=Thaps3058;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 2661520 2661574 . ? . description=dust chr2 . repeat_region 2661550 2661574 . ? . description=trf chr2 . repeat_region 2663134 2663187 . ? . description=trf chr2 . repeat_region 2664821 2664834 . ? . description=dust chr2 . repeat_region 2664982 2676976 . ? . description=trf chr2 . repeat_region 2665621 2665644 . ? . description=trf chr2 . repeat_region 2666102 2666125 . ? . description=trf chr2 . repeat_region 2667061 2667089 . ? . description=trf chr2 . repeat_region 2667061 2667089 . ? . description=dust chr2 ensembl protein_coding_gene 2657635 2660807 . - . ID=Thaps21580;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW48];external_name=Thaps21580;logic_name=jgi_thaps3 chr2 ensembl transcript 2657635 2660807 . - . ID=Thaps21580;Parent=Thaps21580;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2657635 2658183 . - 0 ID=Thaps21580;Parent=Thaps21580;rank=7 chr2 . exon 2657635 2658183 . - . ID=Thaps21580.7;Parent=Thaps21580;constitutive=1;rank=7 chr2 . CDS 2658266 2658377 . - 0 ID=Thaps21580;Parent=Thaps21580;rank=6 chr2 . exon 2658266 2658377 . - . ID=Thaps21580.6;Parent=Thaps21580;constitutive=1;ensembl_end_phase=1;rank=6 chr2 . CDS 2658463 2658547 . - 0 ID=Thaps21580;Parent=Thaps21580;rank=5 chr2 . exon 2658463 2658547 . - . ID=Thaps21580.5;Parent=Thaps21580;constitutive=1;ensembl_end_phase=1;rank=5 chr2 . CDS 2658628 2658747 . - 0 ID=Thaps21580;Parent=Thaps21580;rank=4 chr2 . exon 2658628 2658747 . - . ID=Thaps21580.4;Parent=Thaps21580;constitutive=1;rank=4 chr2 . CDS 2658830 2659466 . - 0 ID=Thaps21580;Parent=Thaps21580;rank=3 chr2 . exon 2658830 2659466 . - . ID=Thaps21580.3;Parent=Thaps21580;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2659487 2659669 . - 0 ID=Thaps21580;Parent=Thaps21580;rank=2 chr2 . exon 2659487 2659669 . - . ID=Thaps21580.2;Parent=Thaps21580;constitutive=1;rank=2 chr2 . CDS 2659755 2660807 . - 0 ID=Thaps21580;Parent=Thaps21580;rank=1 chr2 . exon 2659755 2660807 . - . ID=Thaps21580.1;Parent=Thaps21580;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2662630 2687063 . - . ID=Thaps21581;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW49];external_name=Thaps21581;logic_name=jgi_thaps3 chr2 ensembl transcript 2662630 2687063 . - . ID=Thaps21581;Parent=Thaps21581;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2662630 2662938 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=77 chr2 . exon 2662630 2662938 . - . ID=Thaps21581.77;Parent=Thaps21581;constitutive=1;rank=77 chr2 . CDS 2663031 2663111 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=76 chr2 . exon 2663031 2663111 . - . ID=Thaps21581.76;Parent=Thaps21581;constitutive=1;rank=76 chr2 . CDS 2663309 2663680 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=75 chr2 . exon 2663309 2663680 . - . ID=Thaps21581.75;Parent=Thaps21581;constitutive=1;rank=75 chr2 . CDS 2663766 2664806 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=74 chr2 . exon 2663766 2664806 . - . ID=Thaps21581.74;Parent=Thaps21581;constitutive=1;rank=74 chr2 . CDS 2664987 2665070 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=73 chr2 . exon 2664987 2665070 . - . ID=Thaps21581.73;Parent=Thaps21581;constitutive=1;rank=73 chr2 . CDS 2665193 2665360 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=72 chr2 . exon 2665193 2665360 . - . ID=Thaps21581.72;Parent=Thaps21581;constitutive=1;rank=72 chr2 . CDS 2665464 2665547 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=71 chr2 . exon 2665464 2665547 . - . ID=Thaps21581.71;Parent=Thaps21581;constitutive=1;rank=71 chr2 . CDS 2665675 2665842 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=70 chr2 . exon 2665675 2665842 . - . ID=Thaps21581.70;Parent=Thaps21581;constitutive=1;rank=70 chr2 . CDS 2665946 2666029 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=69 chr2 . exon 2665946 2666029 . - . ID=Thaps21581.69;Parent=Thaps21581;constitutive=1;rank=69 chr2 . CDS 2666156 2666323 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=68 chr2 . exon 2666156 2666323 . - . ID=Thaps21581.68;Parent=Thaps21581;constitutive=1;rank=68 chr2 . CDS 2666427 2666510 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=67 chr2 . exon 2666427 2666510 . - . ID=Thaps21581.67;Parent=Thaps21581;constitutive=1;rank=67 chr2 . CDS 2666633 2666800 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=66 chr2 . exon 2666633 2666800 . - . ID=Thaps21581.66;Parent=Thaps21581;constitutive=1;rank=66 chr2 . CDS 2666904 2666987 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=65 chr2 . exon 2666904 2666987 . - . ID=Thaps21581.65;Parent=Thaps21581;constitutive=1;rank=65 chr2 . CDS 2667120 2667287 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=64 chr2 . exon 2667120 2667287 . - . ID=Thaps21581.64;Parent=Thaps21581;constitutive=1;rank=64 chr2 . CDS 2667391 2667474 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=63 chr2 . CDS 2667597 2667764 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=62 chr2 . CDS 2667868 2667951 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=61 chr2 . CDS 2668079 2668246 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=60 chr2 . CDS 2668350 2668433 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=59 chr2 . CDS 2668566 2668733 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=58 chr2 . CDS 2668837 2668920 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=57 chr2 . CDS 2669048 2669215 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=56 chr2 . CDS 2669319 2669402 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=55 chr2 . CDS 2669525 2669692 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=54 chr2 . CDS 2669796 2669879 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=53 chr2 . CDS 2670007 2670174 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=52 chr2 . CDS 2670278 2670361 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=51 chr2 . CDS 2670489 2670656 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=50 chr2 . CDS 2670760 2670843 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=49 chr2 . CDS 2670966 2671133 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=48 chr2 . CDS 2671237 2671320 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=47 chr2 . CDS 2671448 2671615 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=46 chr2 . CDS 2671719 2671802 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=45 chr2 . CDS 2671930 2672097 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=44 chr2 . CDS 2672201 2672284 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=43 chr2 . CDS 2672407 2672574 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=42 chr2 . CDS 2672678 2672761 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=41 chr2 . CDS 2672889 2673056 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=40 chr2 . CDS 2673160 2673243 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=39 chr2 . CDS 2673365 2673532 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=38 chr2 . CDS 2673636 2673719 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=37 chr2 . CDS 2673847 2674014 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=36 chr2 . CDS 2674118 2674201 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=35 chr2 . CDS 2674324 2674491 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=34 chr2 . CDS 2674595 2674678 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=33 chr2 . CDS 2674806 2674973 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=32 chr2 . CDS 2675077 2675160 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=31 chr2 . CDS 2675282 2675449 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=30 chr2 . CDS 2675553 2675636 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=29 chr2 . CDS 2675764 2675931 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=28 chr2 . CDS 2676035 2676118 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=27 chr2 . CDS 2676241 2676408 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=26 chr2 . CDS 2676512 2676595 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=25 chr2 . CDS 2676718 2676885 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=24 chr2 . CDS 2677030 2677080 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=23 chr2 . CDS 2677118 2677138 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=22 chr2 . CDS 2677540 2677563 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=21 chr2 . CDS 2677642 2677665 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=20 chr2 . CDS 2677859 2677882 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=19 chr2 . CDS 2678179 2678202 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=18 chr2 . CDS 2678498 2678521 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=17 chr2 . CDS 2678817 2678840 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=16 chr2 . CDS 2679136 2679159 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=15 chr2 . CDS 2679455 2679478 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=14 chr2 . CDS 2679775 2679798 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=13 chr2 . CDS 2680094 2680117 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=12 chr2 . CDS 2680196 2680219 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=11 chr2 . CDS 2680413 2680436 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=10 chr2 . CDS 2680732 2680755 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=9 chr2 . CDS 2681051 2681074 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=8 chr2 . CDS 2681275 2681331 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=7 chr2 . CDS 2681382 2681405 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=6 chr2 . CDS 2681616 2681705 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=5 chr2 . CDS 2681985 2683136 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=4 chr2 . CDS 2683219 2684290 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=3 chr2 . CDS 2684366 2685058 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=2 chr2 . CDS 2685145 2687063 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=1 chr2 . exon 2667391 2667474 . - . ID=Thaps21581.63;Parent=Thaps21581;constitutive=1;rank=63 chr2 . exon 2667597 2667764 . - . ID=Thaps21581.62;Parent=Thaps21581;constitutive=1;rank=62 chr2 . exon 2667868 2667951 . - . ID=Thaps21581.61;Parent=Thaps21581;constitutive=1;rank=61 chr2 . exon 2668079 2668246 . - . ID=Thaps21581.60;Parent=Thaps21581;constitutive=1;rank=60 chr2 . exon 2668350 2668433 . - . ID=Thaps21581.59;Parent=Thaps21581;constitutive=1;rank=59 chr2 . exon 2668566 2668733 . - . ID=Thaps21581.58;Parent=Thaps21581;constitutive=1;rank=58 chr2 . exon 2668837 2668920 . - . ID=Thaps21581.57;Parent=Thaps21581;constitutive=1;rank=57 chr2 . exon 2669048 2669215 . - . ID=Thaps21581.56;Parent=Thaps21581;constitutive=1;rank=56 chr2 . exon 2669319 2669402 . - . ID=Thaps21581.55;Parent=Thaps21581;constitutive=1;rank=55 chr2 . exon 2669525 2669692 . - . ID=Thaps21581.54;Parent=Thaps21581;constitutive=1;rank=54 chr2 . exon 2669796 2669879 . - . ID=Thaps21581.53;Parent=Thaps21581;constitutive=1;rank=53 chr2 . exon 2670007 2670174 . - . ID=Thaps21581.52;Parent=Thaps21581;constitutive=1;rank=52 chr2 . exon 2670278 2670361 . - . ID=Thaps21581.51;Parent=Thaps21581;constitutive=1;rank=51 chr2 . exon 2670489 2670656 . - . ID=Thaps21581.50;Parent=Thaps21581;constitutive=1;rank=50 chr2 . exon 2670760 2670843 . - . ID=Thaps21581.49;Parent=Thaps21581;constitutive=1;rank=49 chr2 . exon 2670966 2671133 . - . ID=Thaps21581.48;Parent=Thaps21581;constitutive=1;rank=48 chr2 . exon 2671237 2671320 . - . ID=Thaps21581.47;Parent=Thaps21581;constitutive=1;rank=47 chr2 . exon 2671448 2671615 . - . ID=Thaps21581.46;Parent=Thaps21581;constitutive=1;rank=46 chr2 . exon 2671719 2671802 . - . ID=Thaps21581.45;Parent=Thaps21581;constitutive=1;rank=45 chr2 . exon 2671930 2672097 . - . ID=Thaps21581.44;Parent=Thaps21581;constitutive=1;rank=44 chr2 . exon 2672201 2672284 . - . ID=Thaps21581.43;Parent=Thaps21581;constitutive=1;rank=43 chr2 . exon 2672407 2672574 . - . ID=Thaps21581.42;Parent=Thaps21581;constitutive=1;rank=42 chr2 . exon 2672678 2672761 . - . ID=Thaps21581.41;Parent=Thaps21581;constitutive=1;rank=41 chr2 . exon 2672889 2673056 . - . ID=Thaps21581.40;Parent=Thaps21581;constitutive=1;rank=40 chr2 . exon 2673160 2673243 . - . ID=Thaps21581.39;Parent=Thaps21581;constitutive=1;rank=39 chr2 . exon 2673365 2673532 . - . ID=Thaps21581.38;Parent=Thaps21581;constitutive=1;rank=38 chr2 . exon 2673636 2673719 . - . ID=Thaps21581.37;Parent=Thaps21581;constitutive=1;rank=37 chr2 . exon 2673847 2674014 . - . ID=Thaps21581.36;Parent=Thaps21581;constitutive=1;rank=36 chr2 . exon 2674118 2674201 . - . ID=Thaps21581.35;Parent=Thaps21581;constitutive=1;rank=35 chr2 . exon 2674324 2674491 . - . ID=Thaps21581.34;Parent=Thaps21581;constitutive=1;rank=34 chr2 . exon 2674595 2674678 . - . ID=Thaps21581.33;Parent=Thaps21581;constitutive=1;rank=33 chr2 . exon 2674806 2674973 . - . ID=Thaps21581.32;Parent=Thaps21581;constitutive=1;rank=32 chr2 . exon 2675077 2675160 . - . ID=Thaps21581.31;Parent=Thaps21581;constitutive=1;rank=31 chr2 . exon 2675282 2675449 . - . ID=Thaps21581.30;Parent=Thaps21581;constitutive=1;rank=30 chr2 . exon 2675553 2675636 . - . ID=Thaps21581.29;Parent=Thaps21581;constitutive=1;rank=29 chr2 . exon 2675764 2675931 . - . ID=Thaps21581.28;Parent=Thaps21581;constitutive=1;rank=28 chr2 . exon 2676035 2676118 . - . ID=Thaps21581.27;Parent=Thaps21581;constitutive=1;rank=27 chr2 . exon 2676241 2676408 . - . ID=Thaps21581.26;Parent=Thaps21581;constitutive=1;rank=26 chr2 . exon 2676512 2676595 . - . ID=Thaps21581.25;Parent=Thaps21581;constitutive=1;rank=25 chr2 . exon 2676718 2676885 . - . ID=Thaps21581.24;Parent=Thaps21581;constitutive=1;rank=24 chr2 . exon 2677030 2677080 . - . ID=Thaps21581.23;Parent=Thaps21581;constitutive=1;rank=23 chr2 . exon 2677118 2677138 . - . ID=Thaps21581.22;Parent=Thaps21581;constitutive=1;rank=22 chr2 . repeat_region 2677218 2681228 . ? . description=trf chr2 ensembl protein_coding_gene 2662630 2687063 . - . ID=Thaps21581;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW49];external_name=Thaps21581;logic_name=jgi_thaps3 chr2 ensembl transcript 2662630 2687063 . - . ID=Thaps21581;Parent=Thaps21581;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2662630 2662938 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=77 chr2 . CDS 2663031 2663111 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=76 chr2 . CDS 2663309 2663680 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=75 chr2 . CDS 2663766 2664806 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=74 chr2 . CDS 2664987 2665070 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=73 chr2 . CDS 2665193 2665360 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=72 chr2 . CDS 2665464 2665547 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=71 chr2 . CDS 2665675 2665842 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=70 chr2 . CDS 2665946 2666029 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=69 chr2 . CDS 2666156 2666323 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=68 chr2 . CDS 2666427 2666510 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=67 chr2 . CDS 2666633 2666800 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=66 chr2 . CDS 2666904 2666987 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=65 chr2 . CDS 2667120 2667287 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=64 chr2 . CDS 2667391 2667474 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=63 chr2 . CDS 2667597 2667764 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=62 chr2 . CDS 2667868 2667951 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=61 chr2 . CDS 2668079 2668246 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=60 chr2 . CDS 2668350 2668433 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=59 chr2 . CDS 2668566 2668733 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=58 chr2 . CDS 2668837 2668920 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=57 chr2 . CDS 2669048 2669215 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=56 chr2 . CDS 2669319 2669402 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=55 chr2 . CDS 2669525 2669692 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=54 chr2 . CDS 2669796 2669879 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=53 chr2 . CDS 2670007 2670174 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=52 chr2 . CDS 2670278 2670361 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=51 chr2 . CDS 2670489 2670656 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=50 chr2 . CDS 2670760 2670843 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=49 chr2 . CDS 2670966 2671133 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=48 chr2 . CDS 2671237 2671320 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=47 chr2 . CDS 2671448 2671615 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=46 chr2 . CDS 2671719 2671802 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=45 chr2 . CDS 2671930 2672097 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=44 chr2 . CDS 2672201 2672284 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=43 chr2 . CDS 2672407 2672574 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=42 chr2 . CDS 2672678 2672761 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=41 chr2 . CDS 2672889 2673056 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=40 chr2 . CDS 2673160 2673243 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=39 chr2 . CDS 2673365 2673532 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=38 chr2 . CDS 2673636 2673719 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=37 chr2 . CDS 2673847 2674014 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=36 chr2 . CDS 2674118 2674201 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=35 chr2 . CDS 2674324 2674491 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=34 chr2 . CDS 2674595 2674678 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=33 chr2 . CDS 2674806 2674973 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=32 chr2 . CDS 2675077 2675160 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=31 chr2 . CDS 2675282 2675449 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=30 chr2 . CDS 2675553 2675636 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=29 chr2 . CDS 2675764 2675931 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=28 chr2 . CDS 2676035 2676118 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=27 chr2 . CDS 2676241 2676408 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=26 chr2 . CDS 2676512 2676595 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=25 chr2 . CDS 2676718 2676885 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=24 chr2 . CDS 2677030 2677080 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=23 chr2 . CDS 2677118 2677138 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=22 chr2 . CDS 2677540 2677563 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=21 chr2 . exon 2677540 2677563 . - . ID=Thaps21581.21;Parent=Thaps21581;constitutive=1;rank=21 chr2 . CDS 2677642 2677665 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=20 chr2 . exon 2677642 2677665 . - . ID=Thaps21581.20;Parent=Thaps21581;constitutive=1;rank=20 chr2 . CDS 2677859 2677882 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=19 chr2 . exon 2677859 2677882 . - . ID=Thaps21581.19;Parent=Thaps21581;constitutive=1;rank=19 chr2 . CDS 2678179 2678202 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=18 chr2 . exon 2678179 2678202 . - . ID=Thaps21581.18;Parent=Thaps21581;constitutive=1;rank=18 chr2 . CDS 2678498 2678521 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=17 chr2 . exon 2678498 2678521 . - . ID=Thaps21581.17;Parent=Thaps21581;constitutive=1;rank=17 chr2 . CDS 2678817 2678840 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=16 chr2 . exon 2678817 2678840 . - . ID=Thaps21581.16;Parent=Thaps21581;constitutive=1;rank=16 chr2 . CDS 2679136 2679159 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=15 chr2 . exon 2679136 2679159 . - . ID=Thaps21581.15;Parent=Thaps21581;constitutive=1;rank=15 chr2 . CDS 2679455 2679478 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=14 chr2 . exon 2679455 2679478 . - . ID=Thaps21581.14;Parent=Thaps21581;constitutive=1;rank=14 chr2 . CDS 2679775 2679798 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=13 chr2 . exon 2679775 2679798 . - . ID=Thaps21581.13;Parent=Thaps21581;constitutive=1;rank=13 chr2 . CDS 2680094 2680117 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=12 chr2 . exon 2680094 2680117 . - . ID=Thaps21581.12;Parent=Thaps21581;constitutive=1;rank=12 chr2 . CDS 2680196 2680219 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=11 chr2 . exon 2680196 2680219 . - . ID=Thaps21581.11;Parent=Thaps21581;constitutive=1;rank=11 chr2 . CDS 2680413 2680436 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=10 chr2 . exon 2680413 2680436 . - . ID=Thaps21581.10;Parent=Thaps21581;constitutive=1;rank=10 chr2 . CDS 2680732 2680755 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=9 chr2 . exon 2680732 2680755 . - . ID=Thaps21581.9;Parent=Thaps21581;constitutive=1;rank=9 chr2 . CDS 2681051 2681074 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=8 chr2 . exon 2681051 2681074 . - . ID=Thaps21581.8;Parent=Thaps21581;constitutive=1;rank=8 chr2 . CDS 2681275 2681331 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=7 chr2 . exon 2681275 2681331 . - . ID=Thaps21581.7;Parent=Thaps21581;constitutive=1;rank=7 chr2 . CDS 2681382 2681405 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=6 chr2 . exon 2681382 2681405 . - . ID=Thaps21581.6;Parent=Thaps21581;constitutive=1;rank=6 chr2 . CDS 2681616 2681705 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=5 chr2 . exon 2681616 2681705 . - . ID=Thaps21581.5;Parent=Thaps21581;constitutive=1;rank=5 chr2 . CDS 2681985 2683136 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=4 chr2 . exon 2681985 2683136 . - . ID=Thaps21581.4;Parent=Thaps21581;constitutive=1;rank=4 chr2 . CDS 2683219 2684290 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=3 chr2 . exon 2683219 2684290 . - . ID=Thaps21581.3;Parent=Thaps21581;constitutive=1;ensembl_end_phase=1;rank=3 chr2 . CDS 2684366 2685058 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=2 chr2 . exon 2684366 2685058 . - . ID=Thaps21581.2;Parent=Thaps21581;constitutive=1;rank=2 chr2 . CDS 2685145 2687063 . - 0 ID=Thaps21581;Parent=Thaps21581;rank=1 chr2 . exon 2685145 2687063 . - . ID=Thaps21581.1;Parent=Thaps21581;constitutive=1;ensembl_end_phase=2;rank=1 chr2 . repeat_region 2691432 2691521 . - . description=TE2c_TP chr2 . repeat_region 2691550 2691602 . + . description=TE1A_TP chr2 ensembl protein_coding_gene 2691750 2698770 . - . ID=Thaps21582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW52];external_name=Thaps21582;logic_name=jgi_thaps3 chr2 ensembl transcript 2691750 2698770 . - . ID=Thaps21582;Parent=Thaps21582;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2691750 2692550 . - 0 ID=Thaps21582;Parent=Thaps21582;rank=9 chr2 . exon 2691750 2692550 . - . ID=Thaps21582.9;Parent=Thaps21582;constitutive=1;rank=9 chr2 . CDS 2692632 2692727 . - 0 ID=Thaps21582;Parent=Thaps21582;rank=8 chr2 . exon 2692632 2692727 . - . ID=Thaps21582.8;Parent=Thaps21582;constitutive=1;rank=8 chr2 . CDS 2692813 2692953 . - 0 ID=Thaps21582;Parent=Thaps21582;rank=7 chr2 . exon 2692813 2692953 . - . ID=Thaps21582.7;Parent=Thaps21582;constitutive=1;rank=7 chr2 . CDS 2693038 2693759 . - 0 ID=Thaps21582;Parent=Thaps21582;rank=6 chr2 . exon 2693038 2693759 . - . ID=Thaps21582.6;Parent=Thaps21582;constitutive=1;ensembl_end_phase=2;rank=6 chr2 . CDS 2693843 2693910 . - 0 ID=Thaps21582;Parent=Thaps21582;rank=5 chr2 . exon 2693843 2693910 . - . ID=Thaps21582.5;Parent=Thaps21582;constitutive=1;ensembl_end_phase=2;rank=5 chr2 . CDS 2693989 2694116 . - 0 ID=Thaps21582;Parent=Thaps21582;rank=4 chr2 . exon 2693989 2694116 . - . ID=Thaps21582.4;Parent=Thaps21582;constitutive=1;ensembl_end_phase=2;rank=4 chr2 . CDS 2694193 2694632 . - 0 ID=Thaps21582;Parent=Thaps21582;rank=3 chr2 . exon 2694193 2694632 . - . ID=Thaps21582.3;Parent=Thaps21582;constitutive=1;ensembl_end_phase=2;rank=3 chr2 . CDS 2694687 2695689 . - 0 ID=Thaps21582;Parent=Thaps21582;rank=2 chr2 . exon 2694687 2695689 . - . ID=Thaps21582.2;Parent=Thaps21582;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2695783 2698770 . - 0 ID=Thaps21582;Parent=Thaps21582;rank=1 chr2 . exon 2695783 2698770 . - . ID=Thaps21582.1;Parent=Thaps21582;constitutive=1;rank=1 chr2 ensembl protein_coding_gene 2687955 2689051 . - . ID=Thaps3064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW50];external_name=Thaps3064;logic_name=jgi_thaps3 chr2 ensembl transcript 2687955 2689051 . - . ID=Thaps3064;Parent=Thaps3064;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2687955 2688543 . - 0 ID=Thaps3064;Parent=Thaps3064;rank=2 chr2 . exon 2687955 2688543 . - . ID=Thaps3064.2;Parent=Thaps3064;constitutive=1;ensembl_end_phase=1;rank=2 chr2 . CDS 2688639 2689051 . - 0 ID=Thaps3064;Parent=Thaps3064;rank=1 chr2 . exon 2688639 2689051 . - . ID=Thaps3064.1;Parent=Thaps3064;constitutive=1;ensembl_end_phase=2;rank=1 chr2 ensembl protein_coding_gene 2689518 2690738 . + . ID=Thaps3065;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BW51];external_name=Thaps3065;logic_name=jgi_thaps3 chr2 ensembl transcript 2689518 2690738 . + . ID=Thaps3065;Parent=Thaps3065;biotype=protein_coding;logic_name=jgi_thaps3 chr2 . CDS 2689518 2690196 . + 0 ID=Thaps3065;Parent=Thaps3065;rank=1 chr2 . exon 2689518 2690196 . + . ID=Thaps3065.1;Parent=Thaps3065;constitutive=1;ensembl_end_phase=1;rank=1 chr2 . CDS 2690323 2690738 . + 0 ID=Thaps3065;Parent=Thaps3065;rank=2 chr2 . exon 2690323 2690738 . + . ID=Thaps3065.2;Parent=Thaps3065;constitutive=1;ensembl_end_phase=2;rank=2 chr2 . repeat_region 2699227 2699421 . + . description=Harbinger3_TP chr2 . repeat_region 2699407 2699415 . ? . description=dust chr2 . repeat_region 2699487 2699526 . ? . description=trf chr2 . repeat_region 2699611 2699704 . ? . description=dust chr2 . repeat_region 2699613 2699704 . ? . description=trf chr2 . repeat_region 2699613 2699704 . ? . description=trf chr2 . repeat_region 2699702 2699775 . ? . description=trf chr2 . repeat_region 2700502 2700541 . ? . description=trf chr2 . repeat_region 2700627 2700735 . ? . description=dust chr2 . repeat_region 2700628 2700735 . ? . description=trf chr2 . repeat_region 2700733 2700806 . ? . description=trf chr2 . repeat_region 2700885 2700982 . ? . description=trf chr2 . repeat_region 2701068 2701497 . ? . description=trf chr2 . repeat_region 2701072 2701486 . ? . description=trf chr2 . repeat_region 2706607 2707195 . ? . description=dust chr2 . repeat_region 2706614 2706644 . ? . description=trf chr2 . repeat_region 2706671 2707195 . ? . description=trf ##gff-version 3 ##sequence-region 1 1 3042585 chr1 . repeat_region 4090 4921 . + . description=TE2b_TP chr1 . repeat_region 4437 4492 . ? . description=trf chr1 . repeat_region 4451 4499 . ? . description=trf chr1 . repeat_region 4480 4529 . ? . description=trf chr1 . repeat_region 4859 4898 . ? . description=trf chr1 ensembl protein_coding_gene 300 10356 . - . ID=Thaps867;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSN7];external_name=Thaps867;logic_name=jgi_thaps3 chr1 ensembl transcript 300 10356 . - . ID=Thaps867;Parent=Thaps867;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 300 1153 . - 0 ID=Thaps867;Parent=Thaps867;rank=10 chr1 . exon 300 1153 . - . ID=Thaps867.10;Parent=Thaps867;constitutive=1;ensembl_end_phase=2;rank=10 chr1 . CDS 1199 2425 . - 0 ID=Thaps867;Parent=Thaps867;rank=9 chr1 . exon 1199 2425 . - . ID=Thaps867.9;Parent=Thaps867;constitutive=1;rank=9 chr1 . CDS 2512 2935 . - 0 ID=Thaps867;Parent=Thaps867;rank=8 chr1 . exon 2512 2935 . - . ID=Thaps867.8;Parent=Thaps867;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . CDS 3103 4051 . - 0 ID=Thaps867;Parent=Thaps867;rank=7 chr1 . exon 3103 4051 . - . ID=Thaps867.7;Parent=Thaps867;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 4954 6092 . - 0 ID=Thaps867;Parent=Thaps867;rank=6 chr1 . exon 4954 6092 . - . ID=Thaps867.6;Parent=Thaps867;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 6312 6546 . - 0 ID=Thaps867;Parent=Thaps867;rank=5 chr1 . exon 6312 6546 . - . ID=Thaps867.5;Parent=Thaps867;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 6584 6753 . - 0 ID=Thaps867;Parent=Thaps867;rank=4 chr1 . exon 6584 6753 . - . ID=Thaps867.4;Parent=Thaps867;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 6887 8476 . - 0 ID=Thaps867;Parent=Thaps867;rank=3 chr1 . exon 6887 8476 . - . ID=Thaps867.3;Parent=Thaps867;constitutive=1;rank=3 chr1 . CDS 8545 8919 . - 0 ID=Thaps867;Parent=Thaps867;rank=2 chr1 . exon 8545 8919 . - . ID=Thaps867.2;Parent=Thaps867;constitutive=1;rank=2 chr1 . CDS 8965 10356 . - 0 ID=Thaps867;Parent=Thaps867;rank=1 chr1 . exon 8965 10356 . - . ID=Thaps867.1;Parent=Thaps867;constitutive=1;rank=1 chr1 . repeat_region 15922 16141 . + . description=Harbinger1_TP chr1 . repeat_region 16140 16596 . - . description=Harbinger2N_TP chr1 . repeat_region 16149 16352 . ? . description=dust chr1 . repeat_region 16583 16776 . + . description=Harbinger1_TP chr1 . biological_region 16707 16710 0.999 + . logic_name=eponine chr1 . repeat_region 16712 16719 . ? . description=dust chr1 . repeat_region 16871 16880 . ? . description=dust chr1 . repeat_region 19255 19280 . ? . description=dust chr1 ensembl protein_coding_gene 17783 28449 . - . ID=Thaps869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSN8];external_name=Thaps869;logic_name=jgi_thaps3 chr1 ensembl transcript 17783 28449 . - . ID=Thaps869;Parent=Thaps869;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 17783 17942 . - 0 ID=Thaps869;Parent=Thaps869;rank=50 chr1 . exon 17783 17942 . - . ID=Thaps869.50;Parent=Thaps869;constitutive=1;ensembl_end_phase=1;rank=50 chr1 . CDS 17986 18391 . - 0 ID=Thaps869;Parent=Thaps869;rank=49 chr1 . exon 17986 18391 . - . ID=Thaps869.49;Parent=Thaps869;constitutive=1;ensembl_end_phase=1;rank=49 chr1 . CDS 18469 18628 . - 0 ID=Thaps869;Parent=Thaps869;rank=48 chr1 . exon 18469 18628 . - . ID=Thaps869.48;Parent=Thaps869;constitutive=1;ensembl_end_phase=1;rank=48 chr1 . CDS 18721 18756 . - 0 ID=Thaps869;Parent=Thaps869;rank=47 chr1 . exon 18721 18756 . - . ID=Thaps869.47;Parent=Thaps869;constitutive=1;rank=47 chr1 . CDS 18845 18880 . - 0 ID=Thaps869;Parent=Thaps869;rank=46 chr1 . exon 18845 18880 . - . ID=Thaps869.46;Parent=Thaps869;constitutive=1;rank=46 chr1 . CDS 18969 19004 . - 0 ID=Thaps869;Parent=Thaps869;rank=45 chr1 . exon 18969 19004 . - . ID=Thaps869.45;Parent=Thaps869;constitutive=1;rank=45 chr1 . CDS 19093 19128 . - 0 ID=Thaps869;Parent=Thaps869;rank=44 chr1 . exon 19093 19128 . - . ID=Thaps869.44;Parent=Thaps869;constitutive=1;rank=44 chr1 . CDS 19339 19829 . - 0 ID=Thaps869;Parent=Thaps869;rank=43 chr1 . exon 19339 19829 . - . ID=Thaps869.43;Parent=Thaps869;constitutive=1;ensembl_end_phase=2;rank=43 chr1 . CDS 19957 19992 . - 0 ID=Thaps869;Parent=Thaps869;rank=42 chr1 . CDS 20097 20120 . - 0 ID=Thaps869;Parent=Thaps869;rank=41 chr1 . CDS 20304 20339 . - 0 ID=Thaps869;Parent=Thaps869;rank=40 chr1 . CDS 20444 20467 . - 0 ID=Thaps869;Parent=Thaps869;rank=39 chr1 . CDS 20651 20686 . - 0 ID=Thaps869;Parent=Thaps869;rank=38 chr1 . CDS 20791 20814 . - 0 ID=Thaps869;Parent=Thaps869;rank=37 chr1 . CDS 20998 21033 . - 0 ID=Thaps869;Parent=Thaps869;rank=36 chr1 . CDS 21138 21161 . - 0 ID=Thaps869;Parent=Thaps869;rank=35 chr1 . CDS 21345 21380 . - 0 ID=Thaps869;Parent=Thaps869;rank=34 chr1 . CDS 21485 21508 . - 0 ID=Thaps869;Parent=Thaps869;rank=33 chr1 . CDS 21692 21727 . - 0 ID=Thaps869;Parent=Thaps869;rank=32 chr1 . CDS 21832 21855 . - 0 ID=Thaps869;Parent=Thaps869;rank=31 chr1 . CDS 22039 22074 . - 0 ID=Thaps869;Parent=Thaps869;rank=30 chr1 . CDS 22179 22202 . - 0 ID=Thaps869;Parent=Thaps869;rank=29 chr1 . CDS 22386 22421 . - 0 ID=Thaps869;Parent=Thaps869;rank=28 chr1 . CDS 22526 22549 . - 0 ID=Thaps869;Parent=Thaps869;rank=27 chr1 . CDS 22733 22768 . - 0 ID=Thaps869;Parent=Thaps869;rank=26 chr1 . CDS 22873 22896 . - 0 ID=Thaps869;Parent=Thaps869;rank=25 chr1 . CDS 23080 23115 . - 0 ID=Thaps869;Parent=Thaps869;rank=24 chr1 . CDS 23220 23243 . - 0 ID=Thaps869;Parent=Thaps869;rank=23 chr1 . CDS 23427 23462 . - 0 ID=Thaps869;Parent=Thaps869;rank=22 chr1 . CDS 23567 23590 . - 0 ID=Thaps869;Parent=Thaps869;rank=21 chr1 . CDS 23774 23809 . - 0 ID=Thaps869;Parent=Thaps869;rank=20 chr1 . CDS 23914 23937 . - 0 ID=Thaps869;Parent=Thaps869;rank=19 chr1 . CDS 24121 24156 . - 0 ID=Thaps869;Parent=Thaps869;rank=18 chr1 . CDS 24261 24284 . - 0 ID=Thaps869;Parent=Thaps869;rank=17 chr1 . CDS 24468 24503 . - 0 ID=Thaps869;Parent=Thaps869;rank=16 chr1 . CDS 24608 24631 . - 0 ID=Thaps869;Parent=Thaps869;rank=15 chr1 . CDS 24815 24896 . - 0 ID=Thaps869;Parent=Thaps869;rank=14 chr1 . CDS 24955 24978 . - 0 ID=Thaps869;Parent=Thaps869;rank=13 chr1 . CDS 25162 25197 . - 0 ID=Thaps869;Parent=Thaps869;rank=12 chr1 . CDS 25302 25325 . - 0 ID=Thaps869;Parent=Thaps869;rank=11 chr1 . CDS 25704 25742 . - 0 ID=Thaps869;Parent=Thaps869;rank=10 chr1 . CDS 26152 26190 . - 0 ID=Thaps869;Parent=Thaps869;rank=9 chr1 . CDS 26515 26541 . - 0 ID=Thaps869;Parent=Thaps869;rank=8 chr1 . CDS 26721 26759 . - 0 ID=Thaps869;Parent=Thaps869;rank=7 chr1 . CDS 26991 27019 . - 0 ID=Thaps869;Parent=Thaps869;rank=6 chr1 . CDS 27236 27292 . - 0 ID=Thaps869;Parent=Thaps869;rank=5 chr1 . CDS 27397 27545 . - 0 ID=Thaps869;Parent=Thaps869;rank=4 chr1 . CDS 27671 27913 . - 0 ID=Thaps869;Parent=Thaps869;rank=3 chr1 . CDS 28033 28292 . - 0 ID=Thaps869;Parent=Thaps869;rank=2 chr1 . CDS 28381 28449 . - 0 ID=Thaps869;Parent=Thaps869;rank=1 chr1 . repeat_region 19945 25385 . ? . description=trf chr1 . repeat_region 25443 26400 . ? . description=trf chr1 . exon 19957 19992 . - . ID=Thaps869.42;Parent=Thaps869;constitutive=1;rank=42 chr1 . exon 20097 20120 . - . ID=Thaps869.41;Parent=Thaps869;constitutive=1;rank=41 chr1 . exon 20304 20339 . - . ID=Thaps869.40;Parent=Thaps869;constitutive=1;rank=40 chr1 . exon 20444 20467 . - . ID=Thaps869.39;Parent=Thaps869;constitutive=1;rank=39 chr1 . exon 20651 20686 . - . ID=Thaps869.38;Parent=Thaps869;constitutive=1;rank=38 chr1 . exon 20791 20814 . - . ID=Thaps869.37;Parent=Thaps869;constitutive=1;rank=37 chr1 . exon 20998 21033 . - . ID=Thaps869.36;Parent=Thaps869;constitutive=1;rank=36 chr1 . exon 21138 21161 . - . ID=Thaps869.35;Parent=Thaps869;constitutive=1;rank=35 chr1 . exon 21345 21380 . - . ID=Thaps869.34;Parent=Thaps869;constitutive=1;rank=34 chr1 . exon 21485 21508 . - . ID=Thaps869.33;Parent=Thaps869;constitutive=1;rank=33 chr1 . exon 21692 21727 . - . ID=Thaps869.32;Parent=Thaps869;constitutive=1;rank=32 chr1 . exon 21832 21855 . - . ID=Thaps869.31;Parent=Thaps869;constitutive=1;rank=31 chr1 . exon 22039 22074 . - . ID=Thaps869.30;Parent=Thaps869;constitutive=1;rank=30 chr1 . exon 22179 22202 . - . ID=Thaps869.29;Parent=Thaps869;constitutive=1;rank=29 chr1 . exon 22386 22421 . - . ID=Thaps869.28;Parent=Thaps869;constitutive=1;rank=28 chr1 . exon 22526 22549 . - . ID=Thaps869.27;Parent=Thaps869;constitutive=1;rank=27 chr1 . exon 22733 22768 . - . ID=Thaps869.26;Parent=Thaps869;constitutive=1;rank=26 chr1 . exon 22873 22896 . - . ID=Thaps869.25;Parent=Thaps869;constitutive=1;rank=25 chr1 . exon 23080 23115 . - . ID=Thaps869.24;Parent=Thaps869;constitutive=1;rank=24 chr1 . exon 23220 23243 . - . ID=Thaps869.23;Parent=Thaps869;constitutive=1;rank=23 chr1 . exon 23427 23462 . - . ID=Thaps869.22;Parent=Thaps869;constitutive=1;rank=22 chr1 . exon 23567 23590 . - . ID=Thaps869.21;Parent=Thaps869;constitutive=1;rank=21 chr1 . exon 23774 23809 . - . ID=Thaps869.20;Parent=Thaps869;constitutive=1;rank=20 chr1 . exon 23914 23937 . - . ID=Thaps869.19;Parent=Thaps869;constitutive=1;rank=19 chr1 . exon 24121 24156 . - . ID=Thaps869.18;Parent=Thaps869;constitutive=1;rank=18 chr1 . exon 24261 24284 . - . ID=Thaps869.17;Parent=Thaps869;constitutive=1;rank=17 chr1 . exon 24468 24503 . - . ID=Thaps869.16;Parent=Thaps869;constitutive=1;rank=16 chr1 . exon 24608 24631 . - . ID=Thaps869.15;Parent=Thaps869;constitutive=1;rank=15 chr1 . exon 24815 24896 . - . ID=Thaps869.14;Parent=Thaps869;constitutive=1;ensembl_end_phase=1;rank=14 chr1 . exon 24955 24978 . - . ID=Thaps869.13;Parent=Thaps869;constitutive=1;rank=13 chr1 . exon 25162 25197 . - . ID=Thaps869.12;Parent=Thaps869;constitutive=1;rank=12 chr1 . exon 25302 25325 . - . ID=Thaps869.11;Parent=Thaps869;constitutive=1;rank=11 chr1 . exon 25704 25742 . - . ID=Thaps869.10;Parent=Thaps869;constitutive=1;rank=10 chr1 . exon 26152 26190 . - . ID=Thaps869.9;Parent=Thaps869;constitutive=1;rank=9 chr1 . exon 26515 26541 . - . ID=Thaps869.8;Parent=Thaps869;constitutive=1;rank=8 chr1 . exon 26721 26759 . - . ID=Thaps869.7;Parent=Thaps869;constitutive=1;rank=7 chr1 . exon 26991 27019 . - . ID=Thaps869.6;Parent=Thaps869;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . exon 27236 27292 . - . ID=Thaps869.5;Parent=Thaps869;constitutive=1;rank=5 chr1 . exon 27397 27545 . - . ID=Thaps869.4;Parent=Thaps869;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 27671 27913 . - . ID=Thaps869.3;Parent=Thaps869;constitutive=1;rank=3 chr1 . exon 28033 28292 . - . ID=Thaps869.2;Parent=Thaps869;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 28381 28449 . - . ID=Thaps869.1;Parent=Thaps869;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 29914 33422 . - . ID=Thaps870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSN9];external_name=Thaps870;logic_name=jgi_thaps3 chr1 ensembl transcript 29914 33422 . - . ID=Thaps870;Parent=Thaps870;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 29914 30023 . - 0 ID=Thaps870;Parent=Thaps870;rank=5 chr1 . exon 29914 30023 . - . ID=Thaps870.5;Parent=Thaps870;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 30063 30727 . - 0 ID=Thaps870;Parent=Thaps870;rank=4 chr1 . CDS 30779 30918 . - 0 ID=Thaps870;Parent=Thaps870;rank=3 chr1 . CDS 31004 32131 . - 0 ID=Thaps870;Parent=Thaps870;rank=2 chr1 . CDS 32247 33422 . - 0 ID=Thaps870;Parent=Thaps870;rank=1 chr1 . repeat_region 32290 32297 . ? . description=dust chr1 ensembl protein_coding_gene 33946 34494 . - . ID=Thaps20563;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSP0];external_name=Thaps20563;logic_name=jgi_thaps3 chr1 ensembl transcript 33946 34494 . - . ID=Thaps20563;Parent=Thaps20563;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 33946 34494 . - 0 ID=Thaps20563;Parent=Thaps20563;rank=1 chr1 . exon 33946 34494 . - . ID=Thaps20563.1;Parent=Thaps20563;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 34958 36680 . + . ID=Thaps31076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSP1];external_name=Thaps31076;logic_name=jgi_thaps3 chr1 ensembl transcript 34958 36680 . + . ID=Thaps31076;Parent=Thaps31076;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 34958 35288 . + 0 ID=Thaps31076;Parent=Thaps31076;rank=1 chr1 . exon 34958 35288 . + . ID=Thaps31076.1;Parent=Thaps31076;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 35615 35836 . + 0 ID=Thaps31076;Parent=Thaps31076;rank=2 chr1 . exon 35615 35836 . + . ID=Thaps31076.2;Parent=Thaps31076;constitutive=1;rank=2 chr1 . CDS 35986 36093 . + 0 ID=Thaps31076;Parent=Thaps31076;rank=3 chr1 . exon 35986 36093 . + . ID=Thaps31076.3;Parent=Thaps31076;constitutive=1;rank=3 chr1 . CDS 36190 36307 . + 0 ID=Thaps31076;Parent=Thaps31076;rank=4 chr1 . exon 36190 36307 . + . ID=Thaps31076.4;Parent=Thaps31076;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 36500 36680 . + 0 ID=Thaps31076;Parent=Thaps31076;rank=5 chr1 . exon 36500 36680 . + . ID=Thaps31076.5;Parent=Thaps31076;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . exon 30063 30727 . - . ID=Thaps870.4;Parent=Thaps870;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 30779 30918 . - . ID=Thaps870.3;Parent=Thaps870;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 31004 32131 . - . ID=Thaps870.2;Parent=Thaps870;constitutive=1;rank=2 chr1 . exon 32247 33422 . - . ID=Thaps870.1;Parent=Thaps870;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 37061 38216 . - . ID=Thaps873;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSP2];external_name=Thaps873;logic_name=jgi_thaps3 chr1 ensembl transcript 37061 38216 . - . ID=Thaps873;Parent=Thaps873;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 37061 37174 . - 0 ID=Thaps873;Parent=Thaps873;rank=3 chr1 . exon 37061 37174 . - . ID=Thaps873.3;Parent=Thaps873;constitutive=1;rank=3 chr1 . CDS 37315 37620 . - 0 ID=Thaps873;Parent=Thaps873;rank=2 chr1 . exon 37315 37620 . - . ID=Thaps873.2;Parent=Thaps873;constitutive=1;rank=2 chr1 . CDS 37752 38216 . - 0 ID=Thaps873;Parent=Thaps873;rank=1 chr1 . exon 37752 38216 . - . ID=Thaps873.1;Parent=Thaps873;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 39787 42993 . + . ID=Thaps874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSP3];external_name=Thaps874;logic_name=jgi_thaps3 chr1 ensembl transcript 39787 42993 . + . ID=Thaps874;Parent=Thaps874;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 39787 40054 . + 0 ID=Thaps874;Parent=Thaps874;rank=1 chr1 . exon 39787 40054 . + . ID=Thaps874.1;Parent=Thaps874;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 40194 40227 . + 0 ID=Thaps874;Parent=Thaps874;rank=2 chr1 . CDS 40376 40435 . + 0 ID=Thaps874;Parent=Thaps874;rank=3 chr1 . CDS 40593 40645 . + 0 ID=Thaps874;Parent=Thaps874;rank=4 chr1 . CDS 40699 40766 . + 0 ID=Thaps874;Parent=Thaps874;rank=5 chr1 . CDS 40898 40930 . + 0 ID=Thaps874;Parent=Thaps874;rank=6 chr1 . CDS 41086 41103 . + 0 ID=Thaps874;Parent=Thaps874;rank=7 chr1 . CDS 41257 41274 . + 0 ID=Thaps874;Parent=Thaps874;rank=8 chr1 . CDS 41453 41470 . + 0 ID=Thaps874;Parent=Thaps874;rank=9 chr1 . CDS 41606 41641 . + 0 ID=Thaps874;Parent=Thaps874;rank=10 chr1 . CDS 41777 41812 . + 0 ID=Thaps874;Parent=Thaps874;rank=11 chr1 . CDS 41928 42017 . + 0 ID=Thaps874;Parent=Thaps874;rank=12 chr1 . CDS 42161 42178 . + 0 ID=Thaps874;Parent=Thaps874;rank=13 chr1 . CDS 42254 42554 . + 0 ID=Thaps874;Parent=Thaps874;rank=14 chr1 . CDS 42666 42681 . + 0 ID=Thaps874;Parent=Thaps874;rank=15 chr1 . CDS 42783 42844 . + 0 ID=Thaps874;Parent=Thaps874;rank=16 chr1 . CDS 42947 42993 . + 0 ID=Thaps874;Parent=Thaps874;rank=17 chr1 . repeat_region 41504 41850 . ? . description=trf chr1 . biological_region 43696 43698 0.999 - . logic_name=eponine chr1 . repeat_region 44019 44048 . ? . description=trf chr1 . repeat_region 45985 46005 . ? . description=trf chr1 ensembl protein_coding_gene 48827 49300 . - . ID=Thaps20564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSP5];external_name=Thaps20564;logic_name=jgi_thaps3 chr1 ensembl transcript 48827 49300 . - . ID=Thaps20564;Parent=Thaps20564;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 48827 49300 . - 0 ID=Thaps20564;Parent=Thaps20564;rank=1 chr1 . exon 48827 49300 . - . ID=Thaps20564.1;Parent=Thaps20564;constitutive=1;rank=1 chr1 . exon 40194 40227 . + . ID=Thaps874.2;Parent=Thaps874;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 40376 40435 . + . ID=Thaps874.3;Parent=Thaps874;constitutive=1;rank=3 chr1 . exon 40593 40645 . + . ID=Thaps874.4;Parent=Thaps874;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 40699 40766 . + . ID=Thaps874.5;Parent=Thaps874;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . exon 40898 40930 . + . ID=Thaps874.6;Parent=Thaps874;constitutive=1;rank=6 chr1 . exon 41086 41103 . + . ID=Thaps874.7;Parent=Thaps874;constitutive=1;rank=7 chr1 . exon 41257 41274 . + . ID=Thaps874.8;Parent=Thaps874;constitutive=1;rank=8 chr1 . exon 41453 41470 . + . ID=Thaps874.9;Parent=Thaps874;constitutive=1;rank=9 chr1 . exon 41606 41641 . + . ID=Thaps874.10;Parent=Thaps874;constitutive=1;rank=10 chr1 . exon 41777 41812 . + . ID=Thaps874.11;Parent=Thaps874;constitutive=1;rank=11 chr1 . exon 41928 42017 . + . ID=Thaps874.12;Parent=Thaps874;constitutive=1;rank=12 chr1 . exon 42161 42178 . + . ID=Thaps874.13;Parent=Thaps874;constitutive=1;rank=13 chr1 . exon 42254 42554 . + . ID=Thaps874.14;Parent=Thaps874;constitutive=1;ensembl_end_phase=1;rank=14 chr1 . exon 42666 42681 . + . ID=Thaps874.15;Parent=Thaps874;constitutive=1;ensembl_end_phase=1;rank=15 chr1 . exon 42783 42844 . + . ID=Thaps874.16;Parent=Thaps874;constitutive=1;ensembl_end_phase=2;rank=16 chr1 . exon 42947 42993 . + . ID=Thaps874.17;Parent=Thaps874;constitutive=1;ensembl_end_phase=2;rank=17 chr1 ensembl protein_coding_gene 43897 47773 . + . ID=Thaps875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSP4];external_name=Thaps875;logic_name=jgi_thaps3 chr1 ensembl transcript 43897 47773 . + . ID=Thaps875;Parent=Thaps875;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 43897 44837 . + 0 ID=Thaps875;Parent=Thaps875;rank=1 chr1 . exon 43897 44837 . + . ID=Thaps875.1;Parent=Thaps875;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 45148 47007 . + 0 ID=Thaps875;Parent=Thaps875;rank=2 chr1 . exon 45148 47007 . + . ID=Thaps875.2;Parent=Thaps875;constitutive=1;rank=2 chr1 . CDS 47251 47276 . + 0 ID=Thaps875;Parent=Thaps875;rank=3 chr1 . exon 47251 47276 . + . ID=Thaps875.3;Parent=Thaps875;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 47304 47403 . + 0 ID=Thaps875;Parent=Thaps875;rank=4 chr1 . exon 47304 47403 . + . ID=Thaps875.4;Parent=Thaps875;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 47497 47567 . + 0 ID=Thaps875;Parent=Thaps875;rank=5 chr1 . exon 47497 47567 . + . ID=Thaps875.5;Parent=Thaps875;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 47598 47773 . + 0 ID=Thaps875;Parent=Thaps875;rank=6 chr1 . exon 47598 47773 . + . ID=Thaps875.6;Parent=Thaps875;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . repeat_region 50745 50752 . ? . description=dust chr1 . repeat_region 57212 57220 . ? . description=dust chr1 ensembl protein_coding_gene 53193 54080 . - . ID=Thaps20565;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSP7];external_name=Thaps20565;logic_name=jgi_thaps3 chr1 ensembl transcript 53193 54080 . - . ID=Thaps20565;Parent=Thaps20565;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 53193 54080 . - 0 ID=Thaps20565;Parent=Thaps20565;rank=1 chr1 . exon 53193 54080 . - . ID=Thaps20565.1;Parent=Thaps20565;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 58367 62358 . - . ID=Thaps20567;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ0];external_name=Thaps20567;logic_name=jgi_thaps3 chr1 ensembl transcript 58367 62358 . - . ID=Thaps20567;Parent=Thaps20567;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 58367 58642 . - 0 ID=Thaps20567;Parent=Thaps20567;rank=6 chr1 . exon 58367 58642 . - . ID=Thaps20567.6;Parent=Thaps20567;constitutive=1;rank=6 chr1 . CDS 58734 58830 . - 0 ID=Thaps20567;Parent=Thaps20567;rank=5 chr1 . exon 58734 58830 . - . ID=Thaps20567.5;Parent=Thaps20567;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 58943 59441 . - 0 ID=Thaps20567;Parent=Thaps20567;rank=4 chr1 . exon 58943 59441 . - . ID=Thaps20567.4;Parent=Thaps20567;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 59541 59901 . - 0 ID=Thaps20567;Parent=Thaps20567;rank=3 chr1 . exon 59541 59901 . - . ID=Thaps20567.3;Parent=Thaps20567;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 59983 60783 . - 0 ID=Thaps20567;Parent=Thaps20567;rank=2 chr1 . CDS 60835 62358 . - 0 ID=Thaps20567;Parent=Thaps20567;rank=1 chr1 ensembl protein_coding_gene 57243 58085 . - . ID=Thaps267922;biotype=protein_coding;description=Proteasome subunit beta type [Source:UniProtKB/TrEMBL%3BAcc:B8BSP9];external_name=Thaps267922;logic_name=jgi_thaps3 chr1 ensembl transcript 57243 58085 . - . ID=Thaps267922;Parent=Thaps267922;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 57243 58085 . - 0 ID=Thaps267922;Parent=Thaps267922;rank=1 chr1 . exon 57243 58085 . - . ID=Thaps267922.1;Parent=Thaps267922;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 50913 51107 . + . ID=Thaps30854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSP6];external_name=Thaps30854;logic_name=jgi_thaps3 chr1 ensembl transcript 50913 51107 . + . ID=Thaps30854;Parent=Thaps30854;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 50913 51107 . + 0 ID=Thaps30854;Parent=Thaps30854;rank=1 chr1 . exon 50913 51107 . + . ID=Thaps30854.1;Parent=Thaps30854;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 54547 56275 . + . ID=Thaps879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSP8];external_name=Thaps879;logic_name=jgi_thaps3 chr1 ensembl transcript 54547 56275 . + . ID=Thaps879;Parent=Thaps879;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 54547 54731 . + 0 ID=Thaps879;Parent=Thaps879;rank=1 chr1 . exon 54547 54731 . + . ID=Thaps879.1;Parent=Thaps879;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 54802 55176 . + 0 ID=Thaps879;Parent=Thaps879;rank=2 chr1 . exon 54802 55176 . + . ID=Thaps879.2;Parent=Thaps879;constitutive=1;rank=2 chr1 . CDS 55223 55540 . + 0 ID=Thaps879;Parent=Thaps879;rank=3 chr1 . exon 55223 55540 . + . ID=Thaps879.3;Parent=Thaps879;constitutive=1;rank=3 chr1 . CDS 55727 55872 . + 0 ID=Thaps879;Parent=Thaps879;rank=4 chr1 . exon 55727 55872 . + . ID=Thaps879.4;Parent=Thaps879;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 56121 56275 . + 0 ID=Thaps879;Parent=Thaps879;rank=5 chr1 . exon 56121 56275 . + . ID=Thaps879.5;Parent=Thaps879;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . repeat_region 62140 62159 . ? . description=trf chr1 . repeat_region 62153 62182 . ? . description=trf chr1 . repeat_region 63106 63125 . ? . description=trf chr1 . repeat_region 63433 63454 . ? . description=trf chr1 ensembl protein_coding_gene 63209 63553 . + . ID=Thaps20365;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ1];external_name=Thaps20365;logic_name=jgi_thaps3 chr1 ensembl transcript 63209 63553 . + . ID=Thaps20365;Parent=Thaps20365;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 63209 63344 . + 0 ID=Thaps20365;Parent=Thaps20365;rank=1 chr1 . exon 63209 63344 . + . ID=Thaps20365.1;Parent=Thaps20365;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 63432 63553 . + 0 ID=Thaps20365;Parent=Thaps20365;rank=2 chr1 . exon 63432 63553 . + . ID=Thaps20365.2;Parent=Thaps20365;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 59983 60783 . - . ID=Thaps20567.2;Parent=Thaps20567;constitutive=1;rank=2 chr1 . exon 60835 62358 . - . ID=Thaps20567.1;Parent=Thaps20567;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 65819 67491 . + . ID=Thaps260744;biotype=protein_coding;description=Adenosylmehtionine-8-amino-7-oxononanoate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ3];external_name=Thaps260744;logic_name=jgi_thaps3 chr1 ensembl transcript 65819 67491 . + . ID=Thaps260744;Parent=Thaps260744;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 65819 66306 . + 0 ID=Thaps260744;Parent=Thaps260744;rank=1 chr1 . exon 65819 66306 . + . ID=Thaps260744.1;Parent=Thaps260744;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 66439 66960 . + 0 ID=Thaps260744;Parent=Thaps260744;rank=2 chr1 . exon 66439 66960 . + . ID=Thaps260744.2;Parent=Thaps260744;constitutive=1;rank=2 chr1 . CDS 67057 67491 . + 0 ID=Thaps260744;Parent=Thaps260744;rank=3 chr1 . exon 67057 67491 . + . ID=Thaps260744.3;Parent=Thaps260744;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 63999 65645 . - . ID=Thaps882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ2];external_name=Thaps882;logic_name=jgi_thaps3 chr1 ensembl transcript 63999 65645 . - . ID=Thaps882;Parent=Thaps882;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 63999 65645 . - 0 ID=Thaps882;Parent=Thaps882;rank=1 chr1 . exon 63999 65645 . - . ID=Thaps882.1;Parent=Thaps882;constitutive=1;rank=1 chr1 . repeat_region 70388 70410 . ? . description=dust chr1 . repeat_region 72457 72531 . - . description=Copia9I_TP chr1 . repeat_region 72537 72676 . - . description=Copia9LTR_TP chr1 . repeat_region 77543 77552 . ? . description=dust chr1 ensembl protein_coding_gene 71778 72437 . - . ID=Thaps20569;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ4];external_name=Thaps20569;logic_name=jgi_thaps3 chr1 ensembl transcript 71778 72437 . - . ID=Thaps20569;Parent=Thaps20569;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 71778 72437 . - 0 ID=Thaps20569;Parent=Thaps20569;rank=1 chr1 . exon 71778 72437 . - . ID=Thaps20569.1;Parent=Thaps20569;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 76000 77365 . + . ID=Thaps20570;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ6];external_name=Thaps20570;logic_name=jgi_thaps3 chr1 ensembl transcript 76000 77365 . + . ID=Thaps20570;Parent=Thaps20570;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 76000 76316 . + 0 ID=Thaps20570;Parent=Thaps20570;rank=1 chr1 . exon 76000 76316 . + . ID=Thaps20570.1;Parent=Thaps20570;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 76556 77112 . + 0 ID=Thaps20570;Parent=Thaps20570;rank=2 chr1 . exon 76556 77112 . + . ID=Thaps20570.2;Parent=Thaps20570;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 77217 77365 . + 0 ID=Thaps20570;Parent=Thaps20570;rank=3 chr1 . exon 77217 77365 . + . ID=Thaps20570.3;Parent=Thaps20570;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 79320 80489 . - . ID=Thaps20571;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ8];external_name=Thaps20571;logic_name=jgi_thaps3 chr1 ensembl transcript 79320 80489 . - . ID=Thaps20571;Parent=Thaps20571;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 79320 80489 . - 0 ID=Thaps20571;Parent=Thaps20571;rank=1 chr1 . exon 79320 80489 . - . ID=Thaps20571.1;Parent=Thaps20571;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 73044 74579 . + . ID=Thaps885;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ5];external_name=Thaps885;logic_name=jgi_thaps3 chr1 ensembl transcript 73044 74579 . + . ID=Thaps885;Parent=Thaps885;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 73044 74579 . + 0 ID=Thaps885;Parent=Thaps885;rank=1 chr1 . exon 73044 74579 . + . ID=Thaps885.1;Parent=Thaps885;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 78007 78815 . - . ID=Thaps887;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ7];external_name=Thaps887;logic_name=jgi_thaps3 chr1 ensembl transcript 78007 78815 . - . ID=Thaps887;Parent=Thaps887;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 78007 78590 . - 0 ID=Thaps887;Parent=Thaps887;rank=2 chr1 . exon 78007 78590 . - . ID=Thaps887.2;Parent=Thaps887;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 78752 78815 . - 0 ID=Thaps887;Parent=Thaps887;rank=1 chr1 . exon 78752 78815 . - . ID=Thaps887.1;Parent=Thaps887;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 88698 88733 . ? . description=trf chr1 . repeat_region 89198 89231 . ? . description=trf chr1 ensembl protein_coding_gene 86236 87408 . + . ID=Thaps16912;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR1];external_name=Thaps16912;logic_name=jgi_thaps3 chr1 ensembl transcript 86236 87408 . + . ID=Thaps16912;Parent=Thaps16912;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 86236 86526 . + 0 ID=Thaps16912;Parent=Thaps16912;rank=1 chr1 . exon 86236 86526 . + . ID=Thaps16912.1;Parent=Thaps16912;constitutive=1;rank=1 chr1 . CDS 86690 86723 . + 0 ID=Thaps16912;Parent=Thaps16912;rank=2 chr1 . exon 86690 86723 . + . ID=Thaps16912.2;Parent=Thaps16912;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 86810 86895 . + 0 ID=Thaps16912;Parent=Thaps16912;rank=3 chr1 . exon 86810 86895 . + . ID=Thaps16912.3;Parent=Thaps16912;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 87016 87408 . + 0 ID=Thaps16912;Parent=Thaps16912;rank=4 chr1 . exon 87016 87408 . + . ID=Thaps16912.4;Parent=Thaps16912;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 87898 89259 . + . ID=Thaps20572;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR2];external_name=Thaps20572;logic_name=jgi_thaps3 chr1 ensembl transcript 87898 89259 . + . ID=Thaps20572;Parent=Thaps20572;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 87898 89259 . + 0 ID=Thaps20572;Parent=Thaps20572;rank=1 chr1 . exon 87898 89259 . + . ID=Thaps20572.1;Parent=Thaps20572;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 84865 85029 . - . ID=Thaps31174;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR0];external_name=Thaps31174;logic_name=jgi_thaps3 chr1 ensembl transcript 84865 85029 . - . ID=Thaps31174;Parent=Thaps31174;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 84865 85029 . - 0 ID=Thaps31174;Parent=Thaps31174;rank=1 chr1 . exon 84865 85029 . - . ID=Thaps31174.1;Parent=Thaps31174;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 83841 84290 . + . ID=Thaps889;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSQ9];external_name=Thaps889;logic_name=jgi_thaps3 chr1 ensembl transcript 83841 84290 . + . ID=Thaps889;Parent=Thaps889;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 83841 84290 . + 0 ID=Thaps889;Parent=Thaps889;rank=1 chr1 . exon 83841 84290 . + . ID=Thaps889.1;Parent=Thaps889;constitutive=1;rank=1 chr1 . repeat_region 94115 94122 . ? . description=dust chr1 ensembl gene 94690 96727 . + . ID=Thaps260748;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 94690 96727 . + . ID=Thaps260748;Parent=Thaps260748;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 94690 94813 . + . ID=Thaps260748.1;Parent=Thaps260748;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . exon 94846 94862 . + . ID=Thaps260748.2;Parent=Thaps260748;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 94921 95223 . + . ID=Thaps260748.3;Parent=Thaps260748;constitutive=1;rank=3 chr1 . exon 95248 95260 . + . ID=Thaps260748.4;Parent=Thaps260748;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . exon 95351 95375 . + . ID=Thaps260748.5;Parent=Thaps260748;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . exon 95430 95772 . + . ID=Thaps260748.6;Parent=Thaps260748;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . exon 95880 96496 . + . ID=Thaps260748.7;Parent=Thaps260748;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . exon 96533 96727 . + . ID=Thaps260748.8;Parent=Thaps260748;constitutive=1;rank=8 chr1 ensembl protein_coding_gene 96905 97813 . - . ID=Thaps260749;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR4];external_name=Thaps260749;logic_name=jgi_thaps3 chr1 ensembl transcript 96905 97813 . - . ID=Thaps260749;Parent=Thaps260749;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 96905 97089 . - 0 ID=Thaps260749;Parent=Thaps260749;rank=3 chr1 . exon 96905 97089 . - . ID=Thaps260749.3;Parent=Thaps260749;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 97163 97243 . - 0 ID=Thaps260749;Parent=Thaps260749;rank=2 chr1 . exon 97163 97243 . - . ID=Thaps260749.2;Parent=Thaps260749;constitutive=1;rank=2 chr1 . CDS 97343 97813 . - 0 ID=Thaps260749;Parent=Thaps260749;rank=1 chr1 . exon 97343 97813 . - . ID=Thaps260749.1;Parent=Thaps260749;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 92380 94087 . + . ID=Thaps38933;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR3];external_name=Thaps38933;logic_name=jgi_thaps3 chr1 ensembl transcript 92380 94087 . + . ID=Thaps38933;Parent=Thaps38933;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 92380 92714 . + 0 ID=Thaps38933;Parent=Thaps38933;rank=1 chr1 . exon 92380 92714 . + . ID=Thaps38933.1;Parent=Thaps38933;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 92818 92927 . + 0 ID=Thaps38933;Parent=Thaps38933;rank=2 chr1 . exon 92818 92927 . + . ID=Thaps38933.2;Parent=Thaps38933;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 93025 93298 . + 0 ID=Thaps38933;Parent=Thaps38933;rank=3 chr1 . exon 93025 93298 . + . ID=Thaps38933.3;Parent=Thaps38933;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 93452 93485 . + 0 ID=Thaps38933;Parent=Thaps38933;rank=4 chr1 . exon 93452 93485 . + . ID=Thaps38933.4;Parent=Thaps38933;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 93596 94087 . + 0 ID=Thaps38933;Parent=Thaps38933;rank=5 chr1 . exon 93596 94087 . + . ID=Thaps38933.5;Parent=Thaps38933;constitutive=1;rank=5 chr1 . repeat_region 106490 106851 . ? . description=trf chr1 . repeat_region 106751 107778 . ? . description=trf chr1 . repeat_region 106751 107778 . ? . description=trf chr1 . repeat_region 107676 108078 . ? . description=trf chr1 . repeat_region 107978 108609 . ? . description=trf chr1 ensembl protein_coding_gene 105710 110598 . - . ID=Thaps896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR5];external_name=Thaps896;logic_name=jgi_thaps3 chr1 ensembl transcript 105710 110598 . - . ID=Thaps896;Parent=Thaps896;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 105710 106219 . - 0 ID=Thaps896;Parent=Thaps896;rank=26 chr1 . exon 105710 106219 . - . ID=Thaps896.26;Parent=Thaps896;constitutive=1;rank=26 chr1 . CDS 106314 106366 . - 0 ID=Thaps896;Parent=Thaps896;rank=25 chr1 . exon 106314 106366 . - . ID=Thaps896.25;Parent=Thaps896;constitutive=1;ensembl_end_phase=2;rank=25 chr1 . CDS 106484 106543 . - 0 ID=Thaps896;Parent=Thaps896;rank=24 chr1 . exon 106484 106543 . - . ID=Thaps896.24;Parent=Thaps896;constitutive=1;rank=24 chr1 . CDS 106637 106696 . - 0 ID=Thaps896;Parent=Thaps896;rank=23 chr1 . exon 106637 106696 . - . ID=Thaps896.23;Parent=Thaps896;constitutive=1;rank=23 chr1 . CDS 106790 106843 . - 0 ID=Thaps896;Parent=Thaps896;rank=22 chr1 . exon 106790 106843 . - . ID=Thaps896.22;Parent=Thaps896;constitutive=1;rank=22 chr1 . CDS 106922 106975 . - 0 ID=Thaps896;Parent=Thaps896;rank=21 chr1 . exon 106922 106975 . - . ID=Thaps896.21;Parent=Thaps896;constitutive=1;rank=21 chr1 . CDS 107054 107107 . - 0 ID=Thaps896;Parent=Thaps896;rank=20 chr1 . exon 107054 107107 . - . ID=Thaps896.20;Parent=Thaps896;constitutive=1;rank=20 chr1 . CDS 107187 107240 . - 0 ID=Thaps896;Parent=Thaps896;rank=19 chr1 . exon 107187 107240 . - . ID=Thaps896.19;Parent=Thaps896;constitutive=1;rank=19 chr1 . CDS 107320 107373 . - 0 ID=Thaps896;Parent=Thaps896;rank=18 chr1 . exon 107320 107373 . - . ID=Thaps896.18;Parent=Thaps896;constitutive=1;rank=18 chr1 . CDS 107452 107505 . - 0 ID=Thaps896;Parent=Thaps896;rank=17 chr1 . exon 107452 107505 . - . ID=Thaps896.17;Parent=Thaps896;constitutive=1;rank=17 chr1 . CDS 107584 107637 . - 0 ID=Thaps896;Parent=Thaps896;rank=16 chr1 . exon 107584 107637 . - . ID=Thaps896.16;Parent=Thaps896;constitutive=1;rank=16 chr1 . CDS 107717 107770 . - 0 ID=Thaps896;Parent=Thaps896;rank=15 chr1 . exon 107717 107770 . - . ID=Thaps896.15;Parent=Thaps896;constitutive=1;rank=15 chr1 . CDS 107864 107923 . - 0 ID=Thaps896;Parent=Thaps896;rank=14 chr1 . exon 107864 107923 . - . ID=Thaps896.14;Parent=Thaps896;constitutive=1;rank=14 chr1 . CDS 108017 108070 . - 0 ID=Thaps896;Parent=Thaps896;rank=13 chr1 . exon 108017 108070 . - . ID=Thaps896.13;Parent=Thaps896;constitutive=1;rank=13 chr1 . CDS 108149 108202 . - 0 ID=Thaps896;Parent=Thaps896;rank=12 chr1 . exon 108149 108202 . - . ID=Thaps896.12;Parent=Thaps896;constitutive=1;rank=12 chr1 . CDS 108282 108335 . - 0 ID=Thaps896;Parent=Thaps896;rank=11 chr1 . exon 108282 108335 . - . ID=Thaps896.11;Parent=Thaps896;constitutive=1;rank=11 chr1 . CDS 108415 108468 . - 0 ID=Thaps896;Parent=Thaps896;rank=10 chr1 . exon 108415 108468 . - . ID=Thaps896.10;Parent=Thaps896;constitutive=1;rank=10 chr1 . CDS 108548 108601 . - 0 ID=Thaps896;Parent=Thaps896;rank=9 chr1 . exon 108548 108601 . - . ID=Thaps896.9;Parent=Thaps896;constitutive=1;rank=9 chr1 . CDS 108695 108713 . - 0 ID=Thaps896;Parent=Thaps896;rank=8 chr1 . exon 108695 108713 . - . ID=Thaps896.8;Parent=Thaps896;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . CDS 108830 108868 . - 0 ID=Thaps896;Parent=Thaps896;rank=7 chr1 . exon 108830 108868 . - . ID=Thaps896.7;Parent=Thaps896;constitutive=1;rank=7 chr1 . CDS 108960 108995 . - 0 ID=Thaps896;Parent=Thaps896;rank=6 chr1 . exon 108960 108995 . - . ID=Thaps896.6;Parent=Thaps896;constitutive=1;rank=6 chr1 . CDS 109086 109114 . - 0 ID=Thaps896;Parent=Thaps896;rank=5 chr1 . exon 109086 109114 . - . ID=Thaps896.5;Parent=Thaps896;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 109509 109588 . - 0 ID=Thaps896;Parent=Thaps896;rank=4 chr1 . exon 109509 109588 . - . ID=Thaps896.4;Parent=Thaps896;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 109888 109987 . - 0 ID=Thaps896;Parent=Thaps896;rank=3 chr1 . CDS 110091 110445 . - 0 ID=Thaps896;Parent=Thaps896;rank=2 chr1 . CDS 110527 110598 . - 0 ID=Thaps896;Parent=Thaps896;rank=1 chr1 . repeat_region 112522 112529 . ? . description=dust chr1 ensembl protein_coding_gene 111701 112234 . + . ID=Thaps20576;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR6];external_name=Thaps20576;logic_name=jgi_thaps3 chr1 ensembl transcript 111701 112234 . + . ID=Thaps20576;Parent=Thaps20576;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 111701 112234 . + 0 ID=Thaps20576;Parent=Thaps20576;rank=1 chr1 . exon 111701 112234 . + . ID=Thaps20576.1;Parent=Thaps20576;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 112996 114918 . + . ID=Thaps20577;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR7];external_name=Thaps20577;logic_name=jgi_thaps3 chr1 ensembl transcript 112996 114918 . + . ID=Thaps20577;Parent=Thaps20577;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 112996 113006 . + 0 ID=Thaps20577;Parent=Thaps20577;rank=1 chr1 . exon 112996 113006 . + . ID=Thaps20577.1;Parent=Thaps20577;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 113276 113324 . + 0 ID=Thaps20577;Parent=Thaps20577;rank=2 chr1 . exon 113276 113324 . + . ID=Thaps20577.2;Parent=Thaps20577;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 113422 113570 . + 0 ID=Thaps20577;Parent=Thaps20577;rank=3 chr1 . exon 113422 113570 . + . ID=Thaps20577.3;Parent=Thaps20577;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 113919 114918 . + 0 ID=Thaps20577;Parent=Thaps20577;rank=4 chr1 . exon 113919 114918 . + . ID=Thaps20577.4;Parent=Thaps20577;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . exon 109888 109987 . - . ID=Thaps896.3;Parent=Thaps896;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . exon 110091 110445 . - . ID=Thaps896.2;Parent=Thaps896;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 110527 110598 . - . ID=Thaps896.1;Parent=Thaps896;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 116287 120327 . + . ID=Thaps899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR8];external_name=Thaps899;logic_name=jgi_thaps3 chr1 ensembl transcript 116287 120327 . + . ID=Thaps899;Parent=Thaps899;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 116287 116395 . + 0 ID=Thaps899;Parent=Thaps899;rank=1 chr1 . exon 116287 116395 . + . ID=Thaps899.1;Parent=Thaps899;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 116499 117251 . + 0 ID=Thaps899;Parent=Thaps899;rank=2 chr1 . exon 116499 117251 . + . ID=Thaps899.2;Parent=Thaps899;constitutive=1;rank=2 chr1 . CDS 117335 117523 . + 0 ID=Thaps899;Parent=Thaps899;rank=3 chr1 . exon 117335 117523 . + . ID=Thaps899.3;Parent=Thaps899;constitutive=1;rank=3 chr1 . CDS 117593 118729 . + 0 ID=Thaps899;Parent=Thaps899;rank=4 chr1 . exon 117593 118729 . + . ID=Thaps899.4;Parent=Thaps899;constitutive=1;rank=4 chr1 . CDS 118811 119270 . + 0 ID=Thaps899;Parent=Thaps899;rank=5 chr1 . exon 118811 119270 . + . ID=Thaps899.5;Parent=Thaps899;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 119363 119509 . + 0 ID=Thaps899;Parent=Thaps899;rank=6 chr1 . exon 119363 119509 . + . ID=Thaps899.6;Parent=Thaps899;constitutive=1;rank=6 chr1 . CDS 119595 120327 . + 0 ID=Thaps899;Parent=Thaps899;rank=7 chr1 . exon 119595 120327 . + . ID=Thaps899.7;Parent=Thaps899;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . repeat_region 129498 129524 . ? . description=trf chr1 ensembl protein_coding_gene 124842 126211 . - . ID=Thaps20578;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS0];external_name=Thaps20578;logic_name=jgi_thaps3 chr1 ensembl transcript 124842 126211 . - . ID=Thaps20578;Parent=Thaps20578;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 124842 124850 . - 0 ID=Thaps20578;Parent=Thaps20578;rank=4 chr1 . exon 124842 124850 . - . ID=Thaps20578.4;Parent=Thaps20578;constitutive=1;rank=4 chr1 . CDS 124936 125090 . - 0 ID=Thaps20578;Parent=Thaps20578;rank=3 chr1 . exon 124936 125090 . - . ID=Thaps20578.3;Parent=Thaps20578;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 125206 125737 . - 0 ID=Thaps20578;Parent=Thaps20578;rank=2 chr1 . exon 125206 125737 . - . ID=Thaps20578.2;Parent=Thaps20578;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 125765 126211 . - 0 ID=Thaps20578;Parent=Thaps20578;rank=1 chr1 . exon 125765 126211 . - . ID=Thaps20578.1;Parent=Thaps20578;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 127080 129014 . + . ID=Thaps20579;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS1];external_name=Thaps20579;logic_name=jgi_thaps3 chr1 ensembl transcript 127080 129014 . + . ID=Thaps20579;Parent=Thaps20579;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 127080 128591 . + 0 ID=Thaps20579;Parent=Thaps20579;rank=1 chr1 . exon 127080 128591 . + . ID=Thaps20579.1;Parent=Thaps20579;constitutive=1;rank=1 chr1 . CDS 128685 129014 . + 0 ID=Thaps20579;Parent=Thaps20579;rank=2 chr1 . exon 128685 129014 . + . ID=Thaps20579.2;Parent=Thaps20579;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 121529 124039 . + . ID=Thaps900;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSR9];external_name=Thaps900;logic_name=jgi_thaps3 chr1 ensembl transcript 121529 124039 . + . ID=Thaps900;Parent=Thaps900;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 121529 124039 . + 0 ID=Thaps900;Parent=Thaps900;rank=1 chr1 . exon 121529 124039 . + . ID=Thaps900.1;Parent=Thaps900;constitutive=1;rank=1 chr1 . repeat_region 134473 134483 . ? . description=dust chr1 ensembl protein_coding_gene 130078 133015 . + . ID=Thaps26492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS2];external_name=Thaps26492;logic_name=jgi_thaps3 chr1 ensembl transcript 130078 133015 . + . ID=Thaps26492;Parent=Thaps26492;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 130078 130200 . + 0 ID=Thaps26492;Parent=Thaps26492;rank=1 chr1 . exon 130078 130200 . + . ID=Thaps26492.1;Parent=Thaps26492;constitutive=1;rank=1 chr1 . CDS 130387 131745 . + 0 ID=Thaps26492;Parent=Thaps26492;rank=2 chr1 . exon 130387 131745 . + . ID=Thaps26492.2;Parent=Thaps26492;constitutive=1;rank=2 chr1 . CDS 131837 133015 . + 0 ID=Thaps26492;Parent=Thaps26492;rank=3 chr1 . exon 131837 133015 . + . ID=Thaps26492.3;Parent=Thaps26492;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 136910 138240 . - . ID=Thaps30833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS5];external_name=Thaps30833;logic_name=jgi_thaps3 chr1 ensembl transcript 136910 138240 . - . ID=Thaps30833;Parent=Thaps30833;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 136910 137653 . - 0 ID=Thaps30833;Parent=Thaps30833;rank=2 chr1 . exon 136910 137653 . - . ID=Thaps30833.2;Parent=Thaps30833;constitutive=1;rank=2 chr1 . CDS 137773 138240 . - 0 ID=Thaps30833;Parent=Thaps30833;rank=1 chr1 . exon 137773 138240 . - . ID=Thaps30833.1;Parent=Thaps30833;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 138955 140357 . - . ID=Thaps31021;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS6];external_name=Thaps31021;logic_name=jgi_thaps3 chr1 ensembl transcript 138955 140357 . - . ID=Thaps31021;Parent=Thaps31021;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 138955 140066 . - 0 ID=Thaps31021;Parent=Thaps31021;rank=2 chr1 . exon 138955 140066 . - . ID=Thaps31021.2;Parent=Thaps31021;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 140225 140357 . - 0 ID=Thaps31021;Parent=Thaps31021;rank=1 chr1 ensembl protein_coding_gene 133217 134061 . - . ID=Thaps31266;biotype=protein_coding;description=Isopentenyl-dephosphate delta-isomerase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS3];external_name=Thaps31266;logic_name=jgi_thaps3 chr1 ensembl transcript 133217 134061 . - . ID=Thaps31266;Parent=Thaps31266;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 133217 133496 . - 0 ID=Thaps31266;Parent=Thaps31266;rank=2 chr1 . exon 133217 133496 . - . ID=Thaps31266.2;Parent=Thaps31266;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 133580 134061 . - 0 ID=Thaps31266;Parent=Thaps31266;rank=1 chr1 . exon 133580 134061 . - . ID=Thaps31266.1;Parent=Thaps31266;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 135248 136746 . + . ID=Thaps904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS4];external_name=Thaps904;logic_name=jgi_thaps3 chr1 ensembl transcript 135248 136746 . + . ID=Thaps904;Parent=Thaps904;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 135248 136562 . + 0 ID=Thaps904;Parent=Thaps904;rank=1 chr1 . exon 135248 136562 . + . ID=Thaps904.1;Parent=Thaps904;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 136712 136746 . + 0 ID=Thaps904;Parent=Thaps904;rank=2 chr1 . exon 136712 136746 . + . ID=Thaps904.2;Parent=Thaps904;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 140681 140704 . ? . description=trf chr1 . repeat_region 147720 147941 . + . description=TE2c_TP chr1 . repeat_region 147825 148007 . - . description=TE2c_TP chr1 . repeat_region 148786 149127 . + . description=Harbinger4_TP chr1 . repeat_region 149136 149400 . - . description=TE2c_TP chr1 . repeat_region 149397 149581 . ? . description=trf chr1 . repeat_region 149397 149622 . ? . description=trf chr1 . repeat_region 149566 149607 . ? . description=trf chr1 . repeat_region 149633 149928 . - . description=TE2c_TP chr1 . exon 140225 140357 . - . ID=Thaps31021.1;Parent=Thaps31021;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 141046 143680 . - . ID=Thaps907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS7];external_name=Thaps907;logic_name=jgi_thaps3 chr1 ensembl transcript 141046 143680 . - . ID=Thaps907;Parent=Thaps907;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 141046 141134 . - 0 ID=Thaps907;Parent=Thaps907;rank=6 chr1 . exon 141046 141134 . - . ID=Thaps907.6;Parent=Thaps907;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 141223 141372 . - 0 ID=Thaps907;Parent=Thaps907;rank=5 chr1 . exon 141223 141372 . - . ID=Thaps907.5;Parent=Thaps907;constitutive=1;rank=5 chr1 . CDS 141449 142774 . - 0 ID=Thaps907;Parent=Thaps907;rank=4 chr1 . exon 141449 142774 . - . ID=Thaps907.4;Parent=Thaps907;constitutive=1;rank=4 chr1 . CDS 142925 143363 . - 0 ID=Thaps907;Parent=Thaps907;rank=3 chr1 . exon 142925 143363 . - . ID=Thaps907.3;Parent=Thaps907;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 143437 143560 . - 0 ID=Thaps907;Parent=Thaps907;rank=2 chr1 . exon 143437 143560 . - . ID=Thaps907.2;Parent=Thaps907;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 143643 143680 . - 0 ID=Thaps907;Parent=Thaps907;rank=1 chr1 . exon 143643 143680 . - . ID=Thaps907.1;Parent=Thaps907;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 144328 146022 . + . ID=Thaps908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS8];external_name=Thaps908;logic_name=jgi_thaps3 chr1 ensembl transcript 144328 146022 . + . ID=Thaps908;Parent=Thaps908;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 144328 146022 . + 0 ID=Thaps908;Parent=Thaps908;rank=1 chr1 . exon 144328 146022 . + . ID=Thaps908.1;Parent=Thaps908;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 146736 147170 . + . ID=Thaps909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSS9];external_name=Thaps909;logic_name=jgi_thaps3 chr1 ensembl transcript 146736 147170 . + . ID=Thaps909;Parent=Thaps909;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 146736 147170 . + 0 ID=Thaps909;Parent=Thaps909;rank=1 chr1 . exon 146736 147170 . + . ID=Thaps909.1;Parent=Thaps909;constitutive=1;rank=1 chr1 . repeat_region 149641 149648 . ? . description=dust chr1 . repeat_region 150224 150280 . ? . description=dust chr1 . repeat_region 151529 151587 . - . description=TE2_TP chr1 . repeat_region 151745 151758 . ? . description=dust chr1 . repeat_region 151829 151883 . - . description=TE2a_TP chr1 . repeat_region 156346 156357 . ? . description=dust chr1 . repeat_region 156395 156440 . ? . description=dust chr1 ensembl protein_coding_gene 150046 151321 . + . ID=Thaps20582;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BST0];external_name=Thaps20582;logic_name=jgi_thaps3 chr1 ensembl transcript 150046 151321 . + . ID=Thaps20582;Parent=Thaps20582;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 150046 150109 . + 0 ID=Thaps20582;Parent=Thaps20582;rank=1 chr1 . exon 150046 150109 . + . ID=Thaps20582.1;Parent=Thaps20582;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 150209 150804 . + 0 ID=Thaps20582;Parent=Thaps20582;rank=2 chr1 . exon 150209 150804 . + . ID=Thaps20582.2;Parent=Thaps20582;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 150965 151321 . + 0 ID=Thaps20582;Parent=Thaps20582;rank=3 chr1 . exon 150965 151321 . + . ID=Thaps20582.3;Parent=Thaps20582;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 152380 153386 . + . ID=Thaps260754;biotype=protein_coding;description=3'%2C5'-cyclic amp phosphodiesterase [Source:UniProtKB/TrEMBL%3BAcc:B8BST1];external_name=Thaps260754;logic_name=jgi_thaps3 chr1 ensembl transcript 152380 153386 . + . ID=Thaps260754;Parent=Thaps260754;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 152380 152913 . + 0 ID=Thaps260754;Parent=Thaps260754;rank=1 chr1 . exon 152380 152913 . + . ID=Thaps260754.1;Parent=Thaps260754;constitutive=1;rank=1 chr1 . CDS 152956 153386 . + 0 ID=Thaps260754;Parent=Thaps260754;rank=2 chr1 . exon 152956 153386 . + . ID=Thaps260754.2;Parent=Thaps260754;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 156374 157279 . - . ID=Thaps912;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BST2];external_name=Thaps912;logic_name=jgi_thaps3 chr1 ensembl transcript 156374 157279 . - . ID=Thaps912;Parent=Thaps912;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 156374 157279 . - 0 ID=Thaps912;Parent=Thaps912;rank=1 chr1 . exon 156374 157279 . - . ID=Thaps912.1;Parent=Thaps912;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 157615 159165 . + . ID=Thaps913;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BST3];external_name=Thaps913;logic_name=jgi_thaps3 chr1 ensembl transcript 157615 159165 . + . ID=Thaps913;Parent=Thaps913;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 157615 158338 . + 0 ID=Thaps913;Parent=Thaps913;rank=1 chr1 . exon 157615 158338 . + . ID=Thaps913.1;Parent=Thaps913;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 158429 159165 . + 0 ID=Thaps913;Parent=Thaps913;rank=2 chr1 . exon 158429 159165 . + . ID=Thaps913.2;Parent=Thaps913;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 161645 161664 . ? . description=trf chr1 . repeat_region 163078 163101 . ? . description=trf chr1 ensembl protein_coding_gene 166420 167136 . + . ID=Thaps20583;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BST7];external_name=Thaps20583;logic_name=jgi_thaps3 chr1 ensembl transcript 166420 167136 . + . ID=Thaps20583;Parent=Thaps20583;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 166420 167136 . + 0 ID=Thaps20583;Parent=Thaps20583;rank=1 chr1 . exon 166420 167136 . + . ID=Thaps20583.1;Parent=Thaps20583;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 159781 161532 . - . ID=Thaps914;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BST4];external_name=Thaps914;logic_name=jgi_thaps3 chr1 ensembl transcript 159781 161532 . - . ID=Thaps914;Parent=Thaps914;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 159781 160238 . - 0 ID=Thaps914;Parent=Thaps914;rank=2 chr1 . exon 159781 160238 . - . ID=Thaps914.2;Parent=Thaps914;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 160329 161532 . - 0 ID=Thaps914;Parent=Thaps914;rank=1 chr1 . exon 160329 161532 . - . ID=Thaps914.1;Parent=Thaps914;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 162048 162839 . + . ID=Thaps915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BST5];external_name=Thaps915;logic_name=jgi_thaps3 chr1 ensembl transcript 162048 162839 . + . ID=Thaps915;Parent=Thaps915;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 162048 162839 . + 0 ID=Thaps915;Parent=Thaps915;rank=1 chr1 . exon 162048 162839 . + . ID=Thaps915.1;Parent=Thaps915;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 163066 165978 . - . ID=Thaps916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BST6];external_name=Thaps916;logic_name=jgi_thaps3 chr1 ensembl transcript 163066 165978 . - . ID=Thaps916;Parent=Thaps916;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 163066 165978 . - 0 ID=Thaps916;Parent=Thaps916;rank=1 chr1 . exon 163066 165978 . - . ID=Thaps916.1;Parent=Thaps916;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 167360 167974 . - . ID=Thaps918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BST8];external_name=Thaps918;logic_name=jgi_thaps3 chr1 ensembl transcript 167360 167974 . - . ID=Thaps918;Parent=Thaps918;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 167360 167974 . - 0 ID=Thaps918;Parent=Thaps918;rank=1 chr1 . exon 167360 167974 . - . ID=Thaps918.1;Parent=Thaps918;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 168836 169831 . + . ID=Thaps919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BST9];external_name=Thaps919;logic_name=jgi_thaps3 chr1 ensembl transcript 168836 169831 . + . ID=Thaps919;Parent=Thaps919;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 168836 169831 . + 0 ID=Thaps919;Parent=Thaps919;rank=1 chr1 . exon 168836 169831 . + . ID=Thaps919.1;Parent=Thaps919;constitutive=1;rank=1 chr1 . repeat_region 170982 171000 . ? . description=dust chr1 . repeat_region 176503 176550 . ? . description=dust chr1 ensembl protein_coding_gene 176647 177516 . + . ID=Thaps20584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU2];external_name=Thaps20584;logic_name=jgi_thaps3 chr1 ensembl transcript 176647 177516 . + . ID=Thaps20584;Parent=Thaps20584;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 176647 177516 . + 0 ID=Thaps20584;Parent=Thaps20584;rank=1 chr1 . exon 176647 177516 . + . ID=Thaps20584.1;Parent=Thaps20584;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 171148 173304 . + . ID=Thaps31160;biotype=protein_coding;description=Suppressor of actin mutations protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU0];external_name=Thaps31160;logic_name=jgi_thaps3 chr1 ensembl transcript 171148 173304 . + . ID=Thaps31160;Parent=Thaps31160;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 171148 171552 . + 0 ID=Thaps31160;Parent=Thaps31160;rank=1 chr1 . exon 171148 171552 . + . ID=Thaps31160.1;Parent=Thaps31160;constitutive=1;rank=1 chr1 . CDS 171622 172579 . + 0 ID=Thaps31160;Parent=Thaps31160;rank=2 chr1 . exon 171622 172579 . + . ID=Thaps31160.2;Parent=Thaps31160;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 172694 173304 . + 0 ID=Thaps31160;Parent=Thaps31160;rank=3 chr1 . exon 172694 173304 . + . ID=Thaps31160.3;Parent=Thaps31160;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 173413 175945 . - . ID=Thaps921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU1];external_name=Thaps921;logic_name=jgi_thaps3 chr1 ensembl transcript 173413 175945 . - . ID=Thaps921;Parent=Thaps921;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 173413 175945 . - 0 ID=Thaps921;Parent=Thaps921;rank=1 chr1 . exon 173413 175945 . - . ID=Thaps921.1;Parent=Thaps921;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 177720 178466 . - . ID=Thaps923;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU3];external_name=Thaps923;logic_name=jgi_thaps3 chr1 ensembl transcript 177720 178466 . - . ID=Thaps923;Parent=Thaps923;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 177720 178466 . - 0 ID=Thaps923;Parent=Thaps923;rank=1 chr1 . exon 177720 178466 . - . ID=Thaps923.1;Parent=Thaps923;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 179103 179762 . + . ID=Thaps924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU4];external_name=Thaps924;logic_name=jgi_thaps3 chr1 ensembl transcript 179103 179762 . + . ID=Thaps924;Parent=Thaps924;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 179103 179762 . + 0 ID=Thaps924;Parent=Thaps924;rank=1 chr1 . exon 179103 179762 . + . ID=Thaps924.1;Parent=Thaps924;constitutive=1;rank=1 chr1 . repeat_region 180305 180329 . ? . description=trf chr1 ensembl protein_coding_gene 180171 181756 . + . ID=Thaps20585;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU5];external_name=Thaps20585;logic_name=jgi_thaps3 chr1 ensembl transcript 180171 181756 . + . ID=Thaps20585;Parent=Thaps20585;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 180171 180367 . + 0 ID=Thaps20585;Parent=Thaps20585;rank=1 chr1 . exon 180171 180367 . + . ID=Thaps20585.1;Parent=Thaps20585;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 180412 181756 . + 0 ID=Thaps20585;Parent=Thaps20585;rank=2 chr1 . exon 180412 181756 . + . ID=Thaps20585.2;Parent=Thaps20585;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 188229 189923 . + . ID=Thaps20587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSV0];external_name=Thaps20587;logic_name=jgi_thaps3 chr1 ensembl transcript 188229 189923 . + . ID=Thaps20587;Parent=Thaps20587;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 188229 189923 . + 0 ID=Thaps20587;Parent=Thaps20587;rank=1 chr1 . exon 188229 189923 . + . ID=Thaps20587.1;Parent=Thaps20587;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 183651 184060 . + . ID=Thaps260757;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU7];external_name=BIOD;logic_name=jgi_thaps3 chr1 ensembl transcript 183651 184060 . + . ID=Thaps260757;Parent=Thaps260757;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 183651 183844 . + 0 ID=Thaps260757;Parent=Thaps260757;rank=1 chr1 . exon 183651 183844 . + . ID=Thaps260757.1;Parent=Thaps260757;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 183890 184060 . + 0 ID=Thaps260757;Parent=Thaps260757;rank=2 chr1 . exon 183890 184060 . + . ID=Thaps260757.2;Parent=Thaps260757;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 186437 187381 . + . ID=Thaps38945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU9];external_name=Thaps38945;logic_name=jgi_thaps3 chr1 ensembl transcript 186437 187381 . + . ID=Thaps38945;Parent=Thaps38945;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 186437 186492 . + 0 ID=Thaps38945;Parent=Thaps38945;rank=1 chr1 . exon 186437 186492 . + . ID=Thaps38945.1;Parent=Thaps38945;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 186643 186826 . + 0 ID=Thaps38945;Parent=Thaps38945;rank=2 chr1 . exon 186643 186826 . + . ID=Thaps38945.2;Parent=Thaps38945;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 186968 187254 . + 0 ID=Thaps38945;Parent=Thaps38945;rank=3 chr1 . exon 186968 187254 . + . ID=Thaps38945.3;Parent=Thaps38945;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 187309 187381 . + 0 ID=Thaps38945;Parent=Thaps38945;rank=4 chr1 . exon 187309 187381 . + . ID=Thaps38945.4;Parent=Thaps38945;constitutive=1;ensembl_end_phase=1;rank=4 chr1 ensembl protein_coding_gene 181995 183119 . - . ID=Thaps926;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU6];external_name=Thaps926;logic_name=jgi_thaps3 chr1 ensembl transcript 181995 183119 . - . ID=Thaps926;Parent=Thaps926;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 181995 183119 . - 0 ID=Thaps926;Parent=Thaps926;rank=1 chr1 . exon 181995 183119 . - . ID=Thaps926.1;Parent=Thaps926;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 184499 185884 . - . ID=Thaps928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSU8];external_name=Thaps928;logic_name=jgi_thaps3 chr1 ensembl transcript 184499 185884 . - . ID=Thaps928;Parent=Thaps928;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 184499 184662 . - 0 ID=Thaps928;Parent=Thaps928;rank=4 chr1 . exon 184499 184662 . - . ID=Thaps928.4;Parent=Thaps928;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 184745 184865 . - 0 ID=Thaps928;Parent=Thaps928;rank=3 chr1 . exon 184745 184865 . - . ID=Thaps928.3;Parent=Thaps928;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 184943 185428 . - 0 ID=Thaps928;Parent=Thaps928;rank=2 chr1 . exon 184943 185428 . - . ID=Thaps928.2;Parent=Thaps928;constitutive=1;rank=2 chr1 . CDS 185525 185884 . - 0 ID=Thaps928;Parent=Thaps928;rank=1 chr1 . exon 185525 185884 . - . ID=Thaps928.1;Parent=Thaps928;constitutive=1;rank=1 chr1 . repeat_region 196147 196167 . ? . description=dust chr1 . repeat_region 199390 199441 . ? . description=dust chr1 ensembl protein_coding_gene 197188 197655 . + . ID=Thaps38948;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSV3];external_name=Thaps38948;logic_name=jgi_thaps3 chr1 ensembl transcript 197188 197655 . + . ID=Thaps38948;Parent=Thaps38948;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 197188 197655 . + 0 ID=Thaps38948;Parent=Thaps38948;rank=1 chr1 . exon 197188 197655 . + . ID=Thaps38948.1;Parent=Thaps38948;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 190989 193268 . - . ID=Thaps931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSV1];external_name=Thaps931;logic_name=jgi_thaps3 chr1 ensembl transcript 190989 193268 . - . ID=Thaps931;Parent=Thaps931;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 190989 193268 . - 0 ID=Thaps931;Parent=Thaps931;rank=1 chr1 . exon 190989 193268 . - . ID=Thaps931.1;Parent=Thaps931;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 193848 196587 . - . ID=Thaps932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSV2];external_name=Thaps932;logic_name=jgi_thaps3 chr1 ensembl transcript 193848 196587 . - . ID=Thaps932;Parent=Thaps932;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 193848 194081 . - 0 ID=Thaps932;Parent=Thaps932;rank=3 chr1 . exon 193848 194081 . - . ID=Thaps932.3;Parent=Thaps932;constitutive=1;rank=3 chr1 . CDS 194233 194643 . - 0 ID=Thaps932;Parent=Thaps932;rank=2 chr1 . exon 194233 194643 . - . ID=Thaps932.2;Parent=Thaps932;constitutive=1;rank=2 chr1 . CDS 194764 196587 . - 0 ID=Thaps932;Parent=Thaps932;rank=1 chr1 . exon 194764 196587 . - . ID=Thaps932.1;Parent=Thaps932;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 199108 200519 . + . ID=Thaps934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSV4];external_name=Thaps934;logic_name=jgi_thaps3 chr1 ensembl transcript 199108 200519 . + . ID=Thaps934;Parent=Thaps934;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 199108 199715 . + 0 ID=Thaps934;Parent=Thaps934;rank=1 chr1 . exon 199108 199715 . + . ID=Thaps934.1;Parent=Thaps934;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 199760 200519 . + 0 ID=Thaps934;Parent=Thaps934;rank=2 chr1 . repeat_region 204539 204560 . ? . description=trf chr1 . repeat_region 206787 206819 . - . description=Copia6LTR_TP chr1 ensembl protein_coding_gene 203300 205096 . - . ID=Thaps20589;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSV6];external_name=Thaps20589;logic_name=jgi_thaps3 chr1 ensembl transcript 203300 205096 . - . ID=Thaps20589;Parent=Thaps20589;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 203300 205096 . - 0 ID=Thaps20589;Parent=Thaps20589;rank=1 chr1 . exon 203300 205096 . - . ID=Thaps20589.1;Parent=Thaps20589;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 207008 211074 . + . ID=Thaps260758;biotype=protein_coding;description=Tubulin-specific chaperone d [Source:UniProtKB/TrEMBL%3BAcc:B8BSV8];external_name=Thaps260758;logic_name=jgi_thaps3 chr1 ensembl transcript 207008 211074 . + . ID=Thaps260758;Parent=Thaps260758;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 207008 207110 . + 0 ID=Thaps260758;Parent=Thaps260758;rank=1 chr1 . exon 207008 207110 . + . ID=Thaps260758.1;Parent=Thaps260758;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 207207 207359 . + 0 ID=Thaps260758;Parent=Thaps260758;rank=2 chr1 . exon 207207 207359 . + . ID=Thaps260758.2;Parent=Thaps260758;constitutive=1;rank=2 chr1 . CDS 207477 207770 . + 0 ID=Thaps260758;Parent=Thaps260758;rank=3 chr1 . exon 207477 207770 . + . ID=Thaps260758.3;Parent=Thaps260758;constitutive=1;rank=3 chr1 . CDS 207843 207973 . + 0 ID=Thaps260758;Parent=Thaps260758;rank=4 chr1 . exon 207843 207973 . + . ID=Thaps260758.4;Parent=Thaps260758;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 208001 209866 . + 0 ID=Thaps260758;Parent=Thaps260758;rank=5 chr1 . exon 208001 209866 . + . ID=Thaps260758.5;Parent=Thaps260758;constitutive=1;rank=5 chr1 . CDS 210005 210416 . + 0 ID=Thaps260758;Parent=Thaps260758;rank=6 chr1 . CDS 210496 210737 . + 0 ID=Thaps260758;Parent=Thaps260758;rank=7 chr1 . CDS 210837 211074 . + 0 ID=Thaps260758;Parent=Thaps260758;rank=8 chr1 . exon 199760 200519 . + . ID=Thaps934.2;Parent=Thaps934;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 200612 201508 . - . ID=Thaps935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSV5];external_name=Thaps935;logic_name=jgi_thaps3 chr1 ensembl transcript 200612 201508 . - . ID=Thaps935;Parent=Thaps935;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 200612 200980 . - 0 ID=Thaps935;Parent=Thaps935;rank=2 chr1 . exon 200612 200980 . - . ID=Thaps935.2;Parent=Thaps935;constitutive=1;rank=2 chr1 . CDS 201062 201508 . - 0 ID=Thaps935;Parent=Thaps935;rank=1 chr1 . exon 201062 201508 . - . ID=Thaps935.1;Parent=Thaps935;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 205487 206701 . - . ID=Thaps937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSV7];external_name=Thaps937;logic_name=jgi_thaps3 chr1 ensembl transcript 205487 206701 . - . ID=Thaps937;Parent=Thaps937;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 205487 206701 . - 0 ID=Thaps937;Parent=Thaps937;rank=1 chr1 . exon 205487 206701 . - . ID=Thaps937.1;Parent=Thaps937;constitutive=1;rank=1 chr1 . repeat_region 218300 218307 . ? . description=dust chr1 ensembl protein_coding_gene 211294 214122 . - . ID=Thaps20590;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSV9];external_name=Thaps20590;logic_name=jgi_thaps3 chr1 ensembl transcript 211294 214122 . - . ID=Thaps20590;Parent=Thaps20590;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 211294 214122 . - 0 ID=Thaps20590;Parent=Thaps20590;rank=1 chr1 . exon 211294 214122 . - . ID=Thaps20590.1;Parent=Thaps20590;constitutive=1;rank=1 chr1 . exon 210005 210416 . + . ID=Thaps260758.6;Parent=Thaps260758;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . exon 210496 210737 . + . ID=Thaps260758.7;Parent=Thaps260758;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . exon 210837 211074 . + . ID=Thaps260758.8;Parent=Thaps260758;constitutive=1;ensembl_end_phase=1;rank=8 chr1 ensembl protein_coding_gene 216583 217338 . + . ID=Thaps267929;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW1];external_name=Thaps267929;logic_name=jgi_thaps3 chr1 ensembl transcript 216583 217338 . + . ID=Thaps267929;Parent=Thaps267929;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 216583 216769 . + 0 ID=Thaps267929;Parent=Thaps267929;rank=1 chr1 . exon 216583 216769 . + . ID=Thaps267929.1;Parent=Thaps267929;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 216842 217029 . + 0 ID=Thaps267929;Parent=Thaps267929;rank=2 chr1 . exon 216842 217029 . + . ID=Thaps267929.2;Parent=Thaps267929;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 217126 217338 . + 0 ID=Thaps267929;Parent=Thaps267929;rank=3 chr1 . exon 217126 217338 . + . ID=Thaps267929.3;Parent=Thaps267929;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 214482 216347 . - . ID=Thaps940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW0];external_name=Thaps940;logic_name=jgi_thaps3 chr1 ensembl transcript 214482 216347 . - . ID=Thaps940;Parent=Thaps940;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 214482 216347 . - 0 ID=Thaps940;Parent=Thaps940;rank=1 chr1 . exon 214482 216347 . - . ID=Thaps940.1;Parent=Thaps940;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 217541 218272 . - . ID=Thaps942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW2];external_name=Thaps942;logic_name=jgi_thaps3 chr1 ensembl transcript 217541 218272 . - . ID=Thaps942;Parent=Thaps942;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 217541 218272 . - 0 ID=Thaps942;Parent=Thaps942;rank=1 chr1 . exon 217541 218272 . - . ID=Thaps942.1;Parent=Thaps942;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 218441 218875 . + . ID=Thaps943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW3];external_name=Thaps943;logic_name=jgi_thaps3 chr1 ensembl transcript 218441 218875 . + . ID=Thaps943;Parent=Thaps943;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 218441 218875 . + 0 ID=Thaps943;Parent=Thaps943;rank=1 chr1 . exon 218441 218875 . + . ID=Thaps943.1;Parent=Thaps943;constitutive=1;rank=1 chr1 . repeat_region 226778 226805 . ? . description=trf chr1 ensembl protein_coding_gene 222722 224782 . - . ID=Thaps20593;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW5];external_name=Thaps20593;logic_name=jgi_thaps3 chr1 ensembl transcript 222722 224782 . - . ID=Thaps20593;Parent=Thaps20593;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 222722 224782 . - 0 ID=Thaps20593;Parent=Thaps20593;rank=1 chr1 . exon 222722 224782 . - . ID=Thaps20593.1;Parent=Thaps20593;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 225320 226448 . - . ID=Thaps260761;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW6];external_name=Thaps260761;logic_name=jgi_thaps3 chr1 ensembl transcript 225320 226448 . - . ID=Thaps260761;Parent=Thaps260761;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 225320 225379 . - 0 ID=Thaps260761;Parent=Thaps260761;rank=4 chr1 . exon 225320 225379 . - . ID=Thaps260761.4;Parent=Thaps260761;constitutive=1;rank=4 chr1 . CDS 225431 225808 . - 0 ID=Thaps260761;Parent=Thaps260761;rank=3 chr1 . exon 225431 225808 . - . ID=Thaps260761.3;Parent=Thaps260761;constitutive=1;rank=3 chr1 . CDS 225902 226081 . - 0 ID=Thaps260761;Parent=Thaps260761;rank=2 chr1 . exon 225902 226081 . - . ID=Thaps260761.2;Parent=Thaps260761;constitutive=1;rank=2 chr1 . CDS 226155 226448 . - 0 ID=Thaps260761;Parent=Thaps260761;rank=1 chr1 . exon 226155 226448 . - . ID=Thaps260761.1;Parent=Thaps260761;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 219862 222270 . - . ID=Thaps31276;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW4];external_name=Thaps31276;logic_name=jgi_thaps3 chr1 ensembl transcript 219862 222270 . - . ID=Thaps31276;Parent=Thaps31276;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 219862 220071 . - 0 ID=Thaps31276;Parent=Thaps31276;rank=5 chr1 . exon 219862 220071 . - . ID=Thaps31276.5;Parent=Thaps31276;constitutive=1;rank=5 chr1 . CDS 220366 220572 . - 0 ID=Thaps31276;Parent=Thaps31276;rank=4 chr1 . exon 220366 220572 . - . ID=Thaps31276.4;Parent=Thaps31276;constitutive=1;rank=4 chr1 . CDS 220861 221084 . - 0 ID=Thaps31276;Parent=Thaps31276;rank=3 chr1 . exon 220861 221084 . - . ID=Thaps31276.3;Parent=Thaps31276;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 221528 221628 . - 0 ID=Thaps31276;Parent=Thaps31276;rank=2 chr1 . exon 221528 221628 . - . ID=Thaps31276.2;Parent=Thaps31276;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 222161 222270 . - 0 ID=Thaps31276;Parent=Thaps31276;rank=1 chr1 . exon 222161 222270 . - . ID=Thaps31276.1;Parent=Thaps31276;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 235823 236625 . + . ID=Thaps15791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW7];external_name=Thaps15791;logic_name=jgi_thaps3 chr1 ensembl transcript 235823 236625 . + . ID=Thaps15791;Parent=Thaps15791;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 235823 236077 . + 0 ID=Thaps15791;Parent=Thaps15791;rank=1 chr1 . exon 235823 236077 . + . ID=Thaps15791.1;Parent=Thaps15791;constitutive=1;rank=1 chr1 . CDS 236161 236625 . + 0 ID=Thaps15791;Parent=Thaps15791;rank=2 chr1 . exon 236161 236625 . + . ID=Thaps15791.2;Parent=Thaps15791;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 237961 238485 . - . ID=Thaps18104;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW8];external_name=Thaps18104;logic_name=jgi_thaps3 chr1 ensembl transcript 237961 238485 . - . ID=Thaps18104;Parent=Thaps18104;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 237961 238485 . - 0 ID=Thaps18104;Parent=Thaps18104;rank=1 chr1 . exon 237961 238485 . - . ID=Thaps18104.1;Parent=Thaps18104;constitutive=1;rank=1 chr1 . repeat_region 243645 243687 . ? . description=trf chr1 ensembl protein_coding_gene 240154 240543 . + . ID=Thaps260762;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSW9];external_name=Thaps260762;logic_name=jgi_thaps3 chr1 ensembl transcript 240154 240543 . + . ID=Thaps260762;Parent=Thaps260762;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 240154 240321 . + 0 ID=Thaps260762;Parent=Thaps260762;rank=1 chr1 . exon 240154 240321 . + . ID=Thaps260762.1;Parent=Thaps260762;constitutive=1;rank=1 chr1 . CDS 240409 240543 . + 0 ID=Thaps260762;Parent=Thaps260762;rank=2 chr1 . exon 240409 240543 . + . ID=Thaps260762.2;Parent=Thaps260762;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 245887 246576 . + . ID=Thaps38957;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSX2];external_name=Thaps38957;logic_name=jgi_thaps3 chr1 ensembl transcript 245887 246576 . + . ID=Thaps38957;Parent=Thaps38957;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 245887 246408 . + 0 ID=Thaps38957;Parent=Thaps38957;rank=1 chr1 . exon 245887 246408 . + . ID=Thaps38957.1;Parent=Thaps38957;constitutive=1;rank=1 chr1 . CDS 246442 246576 . + 0 ID=Thaps38957;Parent=Thaps38957;rank=2 chr1 . exon 246442 246576 . + . ID=Thaps38957.2;Parent=Thaps38957;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 241151 243343 . - . ID=Thaps950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSX0];external_name=Thaps950;logic_name=jgi_thaps3 chr1 ensembl transcript 241151 243343 . - . ID=Thaps950;Parent=Thaps950;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 241151 243343 . - 0 ID=Thaps950;Parent=Thaps950;rank=1 chr1 . exon 241151 243343 . - . ID=Thaps950.1;Parent=Thaps950;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 244124 245170 . - . ID=Thaps951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSX1];external_name=Thaps951;logic_name=jgi_thaps3 chr1 ensembl transcript 244124 245170 . - . ID=Thaps951;Parent=Thaps951;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 244124 245170 . - 0 ID=Thaps951;Parent=Thaps951;rank=1 chr1 . exon 244124 245170 . - . ID=Thaps951.1;Parent=Thaps951;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 248084 248767 . + . ID=Thaps953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSX3];external_name=Thaps953;logic_name=jgi_thaps3 chr1 ensembl transcript 248084 248767 . + . ID=Thaps953;Parent=Thaps953;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 248084 248767 . + 0 ID=Thaps953;Parent=Thaps953;rank=1 chr1 . exon 248084 248767 . + . ID=Thaps953.1;Parent=Thaps953;constitutive=1;rank=1 chr1 . repeat_region 250898 250922 . ? . description=dust chr1 . repeat_region 251107 251205 . ? . description=dust chr1 ensembl protein_coding_gene 255422 257056 . - . ID=Thaps20595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSX8];external_name=Thaps20595;logic_name=jgi_thaps3 chr1 ensembl transcript 255422 257056 . - . ID=Thaps20595;Parent=Thaps20595;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 255422 257056 . - 0 ID=Thaps20595;Parent=Thaps20595;rank=1 chr1 . exon 255422 257056 . - . ID=Thaps20595.1;Parent=Thaps20595;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 258263 260215 . - . ID=Thaps20596;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSX9];external_name=Thaps20596;logic_name=jgi_thaps3 chr1 ensembl transcript 258263 260215 . - . ID=Thaps20596;Parent=Thaps20596;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 258263 260215 . - 0 ID=Thaps20596;Parent=Thaps20596;rank=1 chr1 . exon 258263 260215 . - . ID=Thaps20596.1;Parent=Thaps20596;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 253213 253656 . + . ID=Thaps31200;biotype=protein_coding;description=Dual specificity protein phosphatse%2C tyrosine/serine/threonine [Source:UniProtKB/TrEMBL%3BAcc:B8BSX6];external_name=Thaps31200;logic_name=jgi_thaps3 chr1 ensembl transcript 253213 253656 . + . ID=Thaps31200;Parent=Thaps31200;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 253213 253656 . + 0 ID=Thaps31200;Parent=Thaps31200;rank=1 chr1 . exon 253213 253656 . + . ID=Thaps31200.1;Parent=Thaps31200;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 251954 252304 . + . ID=Thaps31499;biotype=protein_coding;description=Dual specificity protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BSX5];external_name=Thaps31499;logic_name=jgi_thaps3 chr1 ensembl transcript 251954 252304 . + . ID=Thaps31499;Parent=Thaps31499;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 251954 252304 . + 0 ID=Thaps31499;Parent=Thaps31499;rank=1 chr1 . exon 251954 252304 . + . ID=Thaps31499.1;Parent=Thaps31499;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 250218 251057 . - . ID=Thaps954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSX4];external_name=Thaps954;logic_name=jgi_thaps3 chr1 ensembl transcript 250218 251057 . - . ID=Thaps954;Parent=Thaps954;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 250218 250606 . - 0 ID=Thaps954;Parent=Thaps954;rank=2 chr1 . exon 250218 250606 . - . ID=Thaps954.2;Parent=Thaps954;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 250814 251057 . - 0 ID=Thaps954;Parent=Thaps954;rank=1 chr1 . exon 250814 251057 . - . ID=Thaps954.1;Parent=Thaps954;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 254050 255366 . + . ID=Thaps957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSX7];external_name=Thaps957;logic_name=jgi_thaps3 chr1 ensembl transcript 254050 255366 . + . ID=Thaps957;Parent=Thaps957;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 254050 255366 . + 0 ID=Thaps957;Parent=Thaps957;rank=1 chr1 . exon 254050 255366 . + . ID=Thaps957.1;Parent=Thaps957;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 266415 268125 . - . ID=Thaps20597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSY3];external_name=Thaps20597;logic_name=jgi_thaps3 chr1 ensembl transcript 266415 268125 . - . ID=Thaps20597;Parent=Thaps20597;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 266415 267496 . - 0 ID=Thaps20597;Parent=Thaps20597;rank=3 chr1 . exon 266415 267496 . - . ID=Thaps20597.3;Parent=Thaps20597;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 267638 267738 . - 0 ID=Thaps20597;Parent=Thaps20597;rank=2 chr1 . exon 267638 267738 . - . ID=Thaps20597.2;Parent=Thaps20597;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 267845 268125 . - 0 ID=Thaps20597;Parent=Thaps20597;rank=1 chr1 . exon 267845 268125 . - . ID=Thaps20597.1;Parent=Thaps20597;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 268428 270587 . + . ID=Thaps20598;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSY4];external_name=Thaps20598;logic_name=jgi_thaps3 chr1 ensembl transcript 268428 270587 . + . ID=Thaps20598;Parent=Thaps20598;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 268428 270587 . + 0 ID=Thaps20598;Parent=Thaps20598;rank=1 chr1 . exon 268428 270587 . + . ID=Thaps20598.1;Parent=Thaps20598;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 264267 265860 . - . ID=Thaps260768;biotype=protein_coding;description=Hydroxymethylglutaryl-coa synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BSY2];external_name=HMCS1;logic_name=jgi_thaps3 chr1 ensembl transcript 264267 265860 . - . ID=Thaps260768;Parent=Thaps260768;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 264267 264364 . - 0 ID=Thaps260768;Parent=Thaps260768;rank=5 chr1 . exon 264267 264364 . - . ID=Thaps260768.5;Parent=Thaps260768;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 264439 264591 . - 0 ID=Thaps260768;Parent=Thaps260768;rank=4 chr1 . exon 264439 264591 . - . ID=Thaps260768.4;Parent=Thaps260768;constitutive=1;rank=4 chr1 . CDS 264643 264960 . - 0 ID=Thaps260768;Parent=Thaps260768;rank=3 chr1 . exon 264643 264960 . - . ID=Thaps260768.3;Parent=Thaps260768;constitutive=1;rank=3 chr1 . CDS 265066 265152 . - 0 ID=Thaps260768;Parent=Thaps260768;rank=2 chr1 . exon 265066 265152 . - . ID=Thaps260768.2;Parent=Thaps260768;constitutive=1;rank=2 chr1 . CDS 265171 265860 . - 0 ID=Thaps260768;Parent=Thaps260768;rank=1 chr1 . exon 265171 265860 . - . ID=Thaps260768.1;Parent=Thaps260768;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 261094 262110 . - . ID=Thaps960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSY0];external_name=Thaps960;logic_name=jgi_thaps3 chr1 ensembl transcript 261094 262110 . - . ID=Thaps960;Parent=Thaps960;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 261094 262110 . - 0 ID=Thaps960;Parent=Thaps960;rank=1 chr1 . exon 261094 262110 . - . ID=Thaps960.1;Parent=Thaps960;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 262460 264157 . - . ID=Thaps961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSY1];external_name=Thaps961;logic_name=jgi_thaps3 chr1 ensembl transcript 262460 264157 . - . ID=Thaps961;Parent=Thaps961;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 262460 264157 . - 0 ID=Thaps961;Parent=Thaps961;rank=1 chr1 . exon 262460 264157 . - . ID=Thaps961.1;Parent=Thaps961;constitutive=1;rank=1 chr1 . repeat_region 277288 277296 . ? . description=dust chr1 ensembl protein_coding_gene 271876 273826 . - . ID=Thaps20600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSY5];external_name=Thaps20600;logic_name=jgi_thaps3 chr1 ensembl transcript 271876 273826 . - . ID=Thaps20600;Parent=Thaps20600;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 271876 272660 . - 0 ID=Thaps20600;Parent=Thaps20600;rank=4 chr1 . exon 271876 272660 . - . ID=Thaps20600.4;Parent=Thaps20600;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 272759 272843 . - 0 ID=Thaps20600;Parent=Thaps20600;rank=3 chr1 . exon 272759 272843 . - . ID=Thaps20600.3;Parent=Thaps20600;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 272925 273062 . - 0 ID=Thaps20600;Parent=Thaps20600;rank=2 chr1 . exon 272925 273062 . - . ID=Thaps20600.2;Parent=Thaps20600;constitutive=1;rank=2 chr1 . CDS 273176 273826 . - 0 ID=Thaps20600;Parent=Thaps20600;rank=1 chr1 . exon 273176 273826 . - . ID=Thaps20600.1;Parent=Thaps20600;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 274270 275276 . + . ID=Thaps20601;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSY6];external_name=Thaps20601;logic_name=jgi_thaps3 chr1 ensembl transcript 274270 275276 . + . ID=Thaps20601;Parent=Thaps20601;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 274270 274911 . + 0 ID=Thaps20601;Parent=Thaps20601;rank=1 chr1 . exon 274270 274911 . + . ID=Thaps20601.1;Parent=Thaps20601;constitutive=1;rank=1 chr1 . CDS 274989 275276 . + 0 ID=Thaps20601;Parent=Thaps20601;rank=2 chr1 . exon 274989 275276 . + . ID=Thaps20601.2;Parent=Thaps20601;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 276619 277625 . + . ID=Thaps20602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSY8];external_name=Thaps20602;logic_name=jgi_thaps3 chr1 ensembl transcript 276619 277625 . + . ID=Thaps20602;Parent=Thaps20602;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 276619 277256 . + 0 ID=Thaps20602;Parent=Thaps20602;rank=1 chr1 . exon 276619 277256 . + . ID=Thaps20602.1;Parent=Thaps20602;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 277370 277625 . + 0 ID=Thaps20602;Parent=Thaps20602;rank=2 chr1 . exon 277370 277625 . + . ID=Thaps20602.2;Parent=Thaps20602;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 278380 279015 . - . ID=Thaps20603;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSY9];external_name=Thaps20603;logic_name=jgi_thaps3 chr1 ensembl transcript 278380 279015 . - . ID=Thaps20603;Parent=Thaps20603;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 278380 279015 . - 0 ID=Thaps20603;Parent=Thaps20603;rank=1 chr1 . exon 278380 279015 . - . ID=Thaps20603.1;Parent=Thaps20603;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 275380 276219 . - . ID=Thaps968;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSY7];external_name=Thaps968;logic_name=jgi_thaps3 chr1 ensembl transcript 275380 276219 . - . ID=Thaps968;Parent=Thaps968;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 275380 276219 . - 0 ID=Thaps968;Parent=Thaps968;rank=1 chr1 . exon 275380 276219 . - . ID=Thaps968.1;Parent=Thaps968;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 285529 288004 . + . ID=Thaps20605;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ2];external_name=Thaps20605;logic_name=jgi_thaps3 chr1 ensembl transcript 285529 288004 . + . ID=Thaps20605;Parent=Thaps20605;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 285529 286417 . + 0 ID=Thaps20605;Parent=Thaps20605;rank=1 chr1 . exon 285529 286417 . + . ID=Thaps20605.1;Parent=Thaps20605;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 286499 286892 . + 0 ID=Thaps20605;Parent=Thaps20605;rank=2 chr1 . exon 286499 286892 . + . ID=Thaps20605.2;Parent=Thaps20605;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 286980 287189 . + 0 ID=Thaps20605;Parent=Thaps20605;rank=3 chr1 . exon 286980 287189 . + . ID=Thaps20605.3;Parent=Thaps20605;constitutive=1;rank=3 chr1 . CDS 287270 287384 . + 0 ID=Thaps20605;Parent=Thaps20605;rank=4 chr1 . exon 287270 287384 . + . ID=Thaps20605.4;Parent=Thaps20605;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 287477 288004 . + 0 ID=Thaps20605;Parent=Thaps20605;rank=5 chr1 . exon 287477 288004 . + . ID=Thaps20605.5;Parent=Thaps20605;constitutive=1;rank=5 chr1 ensembl protein_coding_gene 279707 281039 . + . ID=Thaps31674;biotype=protein_coding;description=Transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ0];external_name=Thaps31674;logic_name=jgi_thaps3 chr1 ensembl transcript 279707 281039 . + . ID=Thaps31674;Parent=Thaps31674;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 279707 280412 . + 0 ID=Thaps31674;Parent=Thaps31674;rank=1 chr1 . exon 279707 280412 . + . ID=Thaps31674.1;Parent=Thaps31674;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 280615 281039 . + 0 ID=Thaps31674;Parent=Thaps31674;rank=2 chr1 . exon 280615 281039 . + . ID=Thaps31674.2;Parent=Thaps31674;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 281432 282283 . - . ID=Thaps972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ1];external_name=Thaps972;logic_name=jgi_thaps3 chr1 ensembl transcript 281432 282283 . - . ID=Thaps972;Parent=Thaps972;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 281432 282283 . - 0 ID=Thaps972;Parent=Thaps972;rank=1 chr1 . exon 281432 282283 . - . ID=Thaps972.1;Parent=Thaps972;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 288095 289327 . - . ID=Thaps974;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ3];external_name=Thaps974;logic_name=jgi_thaps3 chr1 ensembl transcript 288095 289327 . - . ID=Thaps974;Parent=Thaps974;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 288095 289327 . - 0 ID=Thaps974;Parent=Thaps974;rank=1 chr1 . exon 288095 289327 . - . ID=Thaps974.1;Parent=Thaps974;constitutive=1;rank=1 chr1 . repeat_region 289494 289557 . ? . description=trf chr1 . repeat_region 296129 296169 . ? . description=trf chr1 ensembl protein_coding_gene 290262 291390 . + . ID=Thaps16344;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ4];external_name=Thaps16344;logic_name=jgi_thaps3 chr1 ensembl transcript 290262 291390 . + . ID=Thaps16344;Parent=Thaps16344;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 290262 290427 . + 0 ID=Thaps16344;Parent=Thaps16344;rank=1 chr1 . exon 290262 290427 . + . ID=Thaps16344.1;Parent=Thaps16344;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 290524 290857 . + 0 ID=Thaps16344;Parent=Thaps16344;rank=2 chr1 . exon 290524 290857 . + . ID=Thaps16344.2;Parent=Thaps16344;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 290951 291054 . + 0 ID=Thaps16344;Parent=Thaps16344;rank=3 chr1 . exon 290951 291054 . + . ID=Thaps16344.3;Parent=Thaps16344;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 291113 291390 . + 0 ID=Thaps16344;Parent=Thaps16344;rank=4 chr1 . exon 291113 291390 . + . ID=Thaps16344.4;Parent=Thaps16344;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 296600 297951 . - . ID=Thaps267933;biotype=protein_coding;description=Vascular plant like serine/threonine protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ6];external_name=Thaps267933;logic_name=jgi_thaps3 chr1 ensembl transcript 296600 297951 . - . ID=Thaps267933;Parent=Thaps267933;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 296600 296808 . - 0 ID=Thaps267933;Parent=Thaps267933;rank=5 chr1 . exon 296600 296808 . - . ID=Thaps267933.5;Parent=Thaps267933;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 296944 297065 . - 0 ID=Thaps267933;Parent=Thaps267933;rank=4 chr1 . exon 296944 297065 . - . ID=Thaps267933.4;Parent=Thaps267933;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 297120 297159 . - 0 ID=Thaps267933;Parent=Thaps267933;rank=3 chr1 . exon 297120 297159 . - . ID=Thaps267933.3;Parent=Thaps267933;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 297451 297549 . - 0 ID=Thaps267933;Parent=Thaps267933;rank=2 chr1 . exon 297451 297549 . - . ID=Thaps267933.2;Parent=Thaps267933;constitutive=1;rank=2 chr1 . CDS 297672 297951 . - 0 ID=Thaps267933;Parent=Thaps267933;rank=1 chr1 . exon 297672 297951 . - . ID=Thaps267933.1;Parent=Thaps267933;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 295734 296349 . - . ID=Thaps976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ5];external_name=Thaps976;logic_name=jgi_thaps3 chr1 ensembl transcript 295734 296349 . - . ID=Thaps976;Parent=Thaps976;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 295734 295991 . - 0 ID=Thaps976;Parent=Thaps976;rank=2 chr1 . exon 295734 295991 . - . ID=Thaps976.2;Parent=Thaps976;constitutive=1;rank=2 chr1 . CDS 296086 296349 . - 0 ID=Thaps976;Parent=Thaps976;rank=1 chr1 . exon 296086 296349 . - . ID=Thaps976.1;Parent=Thaps976;constitutive=1;rank=1 chr1 . biological_region 300856 300861 0.999 - . logic_name=eponine chr1 ensembl protein_coding_gene 301309 302394 . + . ID=Thaps260772;biotype=protein_coding;description=Cytochrome c biogenesis protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ7];external_name=Thaps260772;logic_name=jgi_thaps3 chr1 ensembl transcript 301309 302394 . + . ID=Thaps260772;Parent=Thaps260772;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 301309 301669 . + 0 ID=Thaps260772;Parent=Thaps260772;rank=1 chr1 . exon 301309 301669 . + . ID=Thaps260772.1;Parent=Thaps260772;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 301712 301780 . + 0 ID=Thaps260772;Parent=Thaps260772;rank=2 chr1 . exon 301712 301780 . + . ID=Thaps260772.2;Parent=Thaps260772;constitutive=1;rank=2 chr1 . CDS 301982 302394 . + 0 ID=Thaps260772;Parent=Thaps260772;rank=3 chr1 . exon 301982 302394 . + . ID=Thaps260772.3;Parent=Thaps260772;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 306859 308177 . - . ID=Thaps38964;biotype=protein_coding;description=Chorismate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BT00];external_name=Thaps38964;logic_name=jgi_thaps3 chr1 ensembl transcript 306859 308177 . - . ID=Thaps38964;Parent=Thaps38964;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 306859 307143 . - 0 ID=Thaps38964;Parent=Thaps38964;rank=2 chr1 . exon 306859 307143 . - . ID=Thaps38964.2;Parent=Thaps38964;constitutive=1;rank=2 chr1 . CDS 307227 308177 . - 0 ID=Thaps38964;Parent=Thaps38964;rank=1 chr1 . exon 307227 308177 . - . ID=Thaps38964.1;Parent=Thaps38964;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 303647 305134 . + . ID=Thaps979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ8];external_name=Thaps979;logic_name=jgi_thaps3 chr1 ensembl transcript 303647 305134 . + . ID=Thaps979;Parent=Thaps979;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 303647 303887 . + 0 ID=Thaps979;Parent=Thaps979;rank=1 chr1 . exon 303647 303887 . + . ID=Thaps979.1;Parent=Thaps979;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 304011 304579 . + 0 ID=Thaps979;Parent=Thaps979;rank=2 chr1 . exon 304011 304579 . + . ID=Thaps979.2;Parent=Thaps979;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 304715 305134 . + 0 ID=Thaps979;Parent=Thaps979;rank=3 chr1 . exon 304715 305134 . + . ID=Thaps979.3;Parent=Thaps979;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 305609 306427 . + . ID=Thaps980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSZ9];external_name=Thaps980;logic_name=jgi_thaps3 chr1 ensembl transcript 305609 306427 . + . ID=Thaps980;Parent=Thaps980;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 305609 305902 . + 0 ID=Thaps980;Parent=Thaps980;rank=1 chr1 . exon 305609 305902 . + . ID=Thaps980.1;Parent=Thaps980;constitutive=1;rank=1 chr1 . CDS 306016 306207 . + 0 ID=Thaps980;Parent=Thaps980;rank=2 chr1 . exon 306016 306207 . + . ID=Thaps980.2;Parent=Thaps980;constitutive=1;rank=2 chr1 . CDS 306359 306427 . + 0 ID=Thaps980;Parent=Thaps980;rank=3 chr1 . exon 306359 306427 . + . ID=Thaps980.3;Parent=Thaps980;constitutive=1;rank=3 chr1 . repeat_region 312804 313306 . ? . description=trf chr1 . repeat_region 312985 313071 . ? . description=trf chr1 . repeat_region 313220 313378 . ? . description=trf chr1 ensembl protein_coding_gene 318977 319632 . - . ID=Thaps20609;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT03];external_name=Thaps20609;logic_name=jgi_thaps3 chr1 ensembl transcript 318977 319632 . - . ID=Thaps20609;Parent=Thaps20609;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 318977 319361 . - 0 ID=Thaps20609;Parent=Thaps20609;rank=2 chr1 . exon 318977 319361 . - . ID=Thaps20609.2;Parent=Thaps20609;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 319499 319632 . - 0 ID=Thaps20609;Parent=Thaps20609;rank=1 chr1 ensembl protein_coding_gene 311962 312111 . + . ID=Thaps31110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT01];external_name=Thaps31110;logic_name=jgi_thaps3 chr1 ensembl transcript 311962 312111 . + . ID=Thaps31110;Parent=Thaps31110;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 311962 312111 . + 0 ID=Thaps31110;Parent=Thaps31110;rank=1 chr1 . exon 311962 312111 . + . ID=Thaps31110.1;Parent=Thaps31110;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 314452 315885 . + . ID=Thaps31394;biotype=protein_coding;description=Aspartate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BT02];external_name=Thaps31394;logic_name=jgi_thaps3 chr1 ensembl transcript 314452 315885 . + . ID=Thaps31394;Parent=Thaps31394;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 314452 314502 . + 0 ID=Thaps31394;Parent=Thaps31394;rank=1 chr1 . exon 314452 314502 . + . ID=Thaps31394.1;Parent=Thaps31394;constitutive=1;rank=1 chr1 . CDS 314609 314944 . + 0 ID=Thaps31394;Parent=Thaps31394;rank=2 chr1 . exon 314609 314944 . + . ID=Thaps31394.2;Parent=Thaps31394;constitutive=1;rank=2 chr1 . CDS 315043 315885 . + 0 ID=Thaps31394;Parent=Thaps31394;rank=3 chr1 . exon 315043 315885 . + . ID=Thaps31394.3;Parent=Thaps31394;constitutive=1;rank=3 chr1 . repeat_region 326251 326290 . ? . description=dust chr1 . exon 319499 319632 . - . ID=Thaps20609.1;Parent=Thaps20609;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 325299 328912 . + . ID=Thaps20611;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT06];external_name=Thaps20611;logic_name=jgi_thaps3 chr1 ensembl transcript 325299 328912 . + . ID=Thaps20611;Parent=Thaps20611;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 325299 328452 . + 0 ID=Thaps20611;Parent=Thaps20611;rank=1 chr1 . exon 325299 328452 . + . ID=Thaps20611.1;Parent=Thaps20611;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 328533 328912 . + 0 ID=Thaps20611;Parent=Thaps20611;rank=2 chr1 . exon 328533 328912 . + . ID=Thaps20611.2;Parent=Thaps20611;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 323440 325125 . - . ID=Thaps26523;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT05];external_name=Thaps26523;logic_name=jgi_thaps3 chr1 ensembl transcript 323440 325125 . - . ID=Thaps26523;Parent=Thaps26523;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 323440 323606 . - 0 ID=Thaps26523;Parent=Thaps26523;rank=7 chr1 . exon 323440 323606 . - . ID=Thaps26523.7;Parent=Thaps26523;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 323691 323851 . - 0 ID=Thaps26523;Parent=Thaps26523;rank=6 chr1 . exon 323691 323851 . - . ID=Thaps26523.6;Parent=Thaps26523;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 323936 324051 . - 0 ID=Thaps26523;Parent=Thaps26523;rank=5 chr1 . exon 323936 324051 . - . ID=Thaps26523.5;Parent=Thaps26523;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 324142 324216 . - 0 ID=Thaps26523;Parent=Thaps26523;rank=4 chr1 . exon 324142 324216 . - . ID=Thaps26523.4;Parent=Thaps26523;constitutive=1;rank=4 chr1 . CDS 324319 324373 . - 0 ID=Thaps26523;Parent=Thaps26523;rank=3 chr1 . exon 324319 324373 . - . ID=Thaps26523.3;Parent=Thaps26523;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 324453 324718 . - 0 ID=Thaps26523;Parent=Thaps26523;rank=2 chr1 . exon 324453 324718 . - . ID=Thaps26523.2;Parent=Thaps26523;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 324826 325125 . - 0 ID=Thaps26523;Parent=Thaps26523;rank=1 chr1 . exon 324826 325125 . - . ID=Thaps26523.1;Parent=Thaps26523;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 320138 320857 . + . ID=Thaps985;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT04];external_name=Thaps985;logic_name=jgi_thaps3 chr1 ensembl transcript 320138 320857 . + . ID=Thaps985;Parent=Thaps985;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 320138 320857 . + 0 ID=Thaps985;Parent=Thaps985;rank=1 chr1 . exon 320138 320857 . + . ID=Thaps985.1;Parent=Thaps985;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 329066 329761 . - . ID=Thaps988;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT07];external_name=Thaps988;logic_name=jgi_thaps3 chr1 ensembl transcript 329066 329761 . - . ID=Thaps988;Parent=Thaps988;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 329066 329761 . - 0 ID=Thaps988;Parent=Thaps988;rank=1 chr1 . exon 329066 329761 . - . ID=Thaps988.1;Parent=Thaps988;constitutive=1;rank=1 chr1 . repeat_region 333616 333644 . ? . description=trf chr1 . repeat_region 334272 334315 . ? . description=trf chr1 . repeat_region 334276 334315 . ? . description=trf chr1 . repeat_region 334877 334908 . ? . description=trf chr1 . repeat_region 335083 335126 . ? . description=trf chr1 . repeat_region 335087 335126 . ? . description=trf chr1 . repeat_region 336710 337183 . ? . description=trf chr1 . repeat_region 336866 336950 . ? . description=trf chr1 . repeat_region 337360 337391 . ? . description=trf chr1 . repeat_region 338377 338516 . + . description=TE2c_TP chr1 ensembl protein_coding_gene 332027 333167 . + . ID=Thaps38973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT08];external_name=Thaps38973;logic_name=jgi_thaps3 chr1 ensembl transcript 332027 333167 . + . ID=Thaps38973;Parent=Thaps38973;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 332027 332117 . + 0 ID=Thaps38973;Parent=Thaps38973;rank=1 chr1 . exon 332027 332117 . + . ID=Thaps38973.1;Parent=Thaps38973;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 332238 332339 . + 0 ID=Thaps38973;Parent=Thaps38973;rank=2 chr1 . exon 332238 332339 . + . ID=Thaps38973.2;Parent=Thaps38973;constitutive=1;rank=2 chr1 . CDS 332434 332493 . + 0 ID=Thaps38973;Parent=Thaps38973;rank=3 chr1 . exon 332434 332493 . + . ID=Thaps38973.3;Parent=Thaps38973;constitutive=1;rank=3 chr1 . CDS 332572 333167 . + 0 ID=Thaps38973;Parent=Thaps38973;rank=4 chr1 . exon 332572 333167 . + . ID=Thaps38973.4;Parent=Thaps38973;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 336508 338236 . - . ID=Thaps990;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT09];external_name=Thaps990;logic_name=jgi_thaps3 chr1 ensembl transcript 336508 338236 . - . ID=Thaps990;Parent=Thaps990;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 336508 337763 . - 0 ID=Thaps990;Parent=Thaps990;rank=3 chr1 . exon 336508 337763 . - . ID=Thaps990.3;Parent=Thaps990;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 337855 337976 . - 0 ID=Thaps990;Parent=Thaps990;rank=2 chr1 . exon 337855 337976 . - . ID=Thaps990.2;Parent=Thaps990;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 338109 338236 . - 0 ID=Thaps990;Parent=Thaps990;rank=1 chr1 . exon 338109 338236 . - . ID=Thaps990.1;Parent=Thaps990;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 338778 344895 . - . ID=Thaps991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT10];external_name=Thaps991;logic_name=jgi_thaps3 chr1 ensembl transcript 338778 344895 . - . ID=Thaps991;Parent=Thaps991;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 338778 339398 . - 0 ID=Thaps991;Parent=Thaps991;rank=10 chr1 . exon 338778 339398 . - . ID=Thaps991.10;Parent=Thaps991;constitutive=1;rank=10 chr1 . CDS 339539 340174 . - 0 ID=Thaps991;Parent=Thaps991;rank=9 chr1 . CDS 340203 340432 . - 0 ID=Thaps991;Parent=Thaps991;rank=8 chr1 . CDS 340468 340714 . - 0 ID=Thaps991;Parent=Thaps991;rank=7 chr1 . CDS 340887 341375 . - 0 ID=Thaps991;Parent=Thaps991;rank=6 chr1 . CDS 341492 341822 . - 0 ID=Thaps991;Parent=Thaps991;rank=5 chr1 . CDS 341952 342153 . - 0 ID=Thaps991;Parent=Thaps991;rank=4 chr1 . CDS 342258 343517 . - 0 ID=Thaps991;Parent=Thaps991;rank=3 chr1 . CDS 343604 344420 . - 0 ID=Thaps991;Parent=Thaps991;rank=2 chr1 . CDS 344554 344895 . - 0 ID=Thaps991;Parent=Thaps991;rank=1 chr1 . repeat_region 346445 346468 . ? . description=dust chr1 . repeat_region 346787 346810 . ? . description=dust chr1 . repeat_region 347619 347626 . ? . description=dust chr1 . repeat_region 348827 348876 . ? . description=dust chr1 . exon 339539 340174 . - . ID=Thaps991.9;Parent=Thaps991;constitutive=1;rank=9 chr1 . exon 340203 340432 . - . ID=Thaps991.8;Parent=Thaps991;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . exon 340468 340714 . - . ID=Thaps991.7;Parent=Thaps991;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . exon 340887 341375 . - . ID=Thaps991.6;Parent=Thaps991;constitutive=1;rank=6 chr1 . exon 341492 341822 . - . ID=Thaps991.5;Parent=Thaps991;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . exon 341952 342153 . - . ID=Thaps991.4;Parent=Thaps991;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . exon 342258 343517 . - . ID=Thaps991.3;Parent=Thaps991;constitutive=1;rank=3 chr1 . exon 343604 344420 . - . ID=Thaps991.2;Parent=Thaps991;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 344554 344895 . - . ID=Thaps991.1;Parent=Thaps991;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 348192 349923 . - . ID=Thaps992;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT11];external_name=Thaps992;logic_name=jgi_thaps3 chr1 ensembl transcript 348192 349923 . - . ID=Thaps992;Parent=Thaps992;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 348192 349450 . - 0 ID=Thaps992;Parent=Thaps992;rank=3 chr1 . exon 348192 349450 . - . ID=Thaps992.3;Parent=Thaps992;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 349542 349663 . - 0 ID=Thaps992;Parent=Thaps992;rank=2 chr1 . CDS 349796 349923 . - 0 ID=Thaps992;Parent=Thaps992;rank=1 chr1 . repeat_region 350064 350203 . + . description=TE2c_TP chr1 . repeat_region 352607 352710 . ? . description=trf chr1 . repeat_region 357543 357571 . ? . description=trf chr1 . exon 349542 349663 . - . ID=Thaps992.2;Parent=Thaps992;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 349796 349923 . - . ID=Thaps992.1;Parent=Thaps992;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 350465 356582 . - . ID=Thaps993;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT12];external_name=Thaps993;logic_name=jgi_thaps3 chr1 ensembl transcript 350465 356582 . - . ID=Thaps993;Parent=Thaps993;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 350465 351085 . - 0 ID=Thaps993;Parent=Thaps993;rank=10 chr1 . exon 350465 351085 . - . ID=Thaps993.10;Parent=Thaps993;constitutive=1;rank=10 chr1 . CDS 351226 351861 . - 0 ID=Thaps993;Parent=Thaps993;rank=9 chr1 . exon 351226 351861 . - . ID=Thaps993.9;Parent=Thaps993;constitutive=1;rank=9 chr1 . CDS 351890 352119 . - 0 ID=Thaps993;Parent=Thaps993;rank=8 chr1 . exon 351890 352119 . - . ID=Thaps993.8;Parent=Thaps993;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . CDS 352155 352401 . - 0 ID=Thaps993;Parent=Thaps993;rank=7 chr1 . exon 352155 352401 . - . ID=Thaps993.7;Parent=Thaps993;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 352574 353062 . - 0 ID=Thaps993;Parent=Thaps993;rank=6 chr1 . exon 352574 353062 . - . ID=Thaps993.6;Parent=Thaps993;constitutive=1;rank=6 chr1 . CDS 353179 353509 . - 0 ID=Thaps993;Parent=Thaps993;rank=5 chr1 . exon 353179 353509 . - . ID=Thaps993.5;Parent=Thaps993;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 353639 353840 . - 0 ID=Thaps993;Parent=Thaps993;rank=4 chr1 . exon 353639 353840 . - . ID=Thaps993.4;Parent=Thaps993;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 353945 355204 . - 0 ID=Thaps993;Parent=Thaps993;rank=3 chr1 . exon 353945 355204 . - . ID=Thaps993.3;Parent=Thaps993;constitutive=1;rank=3 chr1 . CDS 355291 356107 . - 0 ID=Thaps993;Parent=Thaps993;rank=2 chr1 . exon 355291 356107 . - . ID=Thaps993.2;Parent=Thaps993;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 356241 356582 . - 0 ID=Thaps993;Parent=Thaps993;rank=1 chr1 . exon 356241 356582 . - . ID=Thaps993.1;Parent=Thaps993;constitutive=1;rank=1 chr1 . repeat_region 358903 370258 . ? . description=dust chr1 . repeat_region 370781 370809 . ? . description=trf chr1 . repeat_region 371384 371420 . ? . description=trf chr1 . repeat_region 371420 371440 . ? . description=trf chr1 . repeat_region 371885 371918 . ? . description=trf chr1 . repeat_region 377605 377640 . ? . description=trf chr1 ensembl protein_coding_gene 377920 379654 . + . ID=Thaps13578;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT14];external_name=Thaps13578;logic_name=jgi_thaps3 chr1 ensembl transcript 377920 379654 . + . ID=Thaps13578;Parent=Thaps13578;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 377920 378315 . + 0 ID=Thaps13578;Parent=Thaps13578;rank=1 chr1 . exon 377920 378315 . + . ID=Thaps13578.1;Parent=Thaps13578;constitutive=1;rank=1 chr1 . CDS 378566 379654 . + 0 ID=Thaps13578;Parent=Thaps13578;rank=2 chr1 . exon 378566 379654 . + . ID=Thaps13578.2;Parent=Thaps13578;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 372959 374725 . - . ID=Thaps20613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT13];external_name=Thaps20613;logic_name=jgi_thaps3 chr1 ensembl transcript 372959 374725 . - . ID=Thaps20613;Parent=Thaps20613;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 372959 373937 . - 0 ID=Thaps20613;Parent=Thaps20613;rank=2 chr1 . exon 372959 373937 . - . ID=Thaps20613.2;Parent=Thaps20613;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 374250 374725 . - 0 ID=Thaps20613;Parent=Thaps20613;rank=1 chr1 . exon 374250 374725 . - . ID=Thaps20613.1;Parent=Thaps20613;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 387156 387196 . ? . description=dust chr1 ensembl protein_coding_gene 380663 383837 . - . ID=Thaps20615;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT15];external_name=Thaps20615;logic_name=jgi_thaps3 chr1 ensembl transcript 380663 383837 . - . ID=Thaps20615;Parent=Thaps20615;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 380663 380668 . - 0 ID=Thaps20615;Parent=Thaps20615;rank=2 chr1 . exon 380663 380668 . - . ID=Thaps20615.2;Parent=Thaps20615;constitutive=1;rank=2 chr1 . CDS 380778 383837 . - 0 ID=Thaps20615;Parent=Thaps20615;rank=1 chr1 . exon 380778 383837 . - . ID=Thaps20615.1;Parent=Thaps20615;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 386270 387040 . + . ID=Thaps31415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT17];external_name=Thaps31415;logic_name=jgi_thaps3 chr1 ensembl transcript 386270 387040 . + . ID=Thaps31415;Parent=Thaps31415;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 386270 386618 . + 0 ID=Thaps31415;Parent=Thaps31415;rank=1 chr1 . exon 386270 386618 . + . ID=Thaps31415.1;Parent=Thaps31415;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 386667 387040 . + 0 ID=Thaps31415;Parent=Thaps31415;rank=2 chr1 . exon 386667 387040 . + . ID=Thaps31415.2;Parent=Thaps31415;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 384254 385532 . - . ID=Thaps997;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT16];external_name=Thaps997;logic_name=jgi_thaps3 chr1 ensembl transcript 384254 385532 . - . ID=Thaps997;Parent=Thaps997;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 384254 384282 . - 0 ID=Thaps997;Parent=Thaps997;rank=3 chr1 . exon 384254 384282 . - . ID=Thaps997.3;Parent=Thaps997;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 384379 385259 . - 0 ID=Thaps997;Parent=Thaps997;rank=2 chr1 . exon 384379 385259 . - . ID=Thaps997.2;Parent=Thaps997;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 385384 385532 . - 0 ID=Thaps997;Parent=Thaps997;rank=1 chr1 . exon 385384 385532 . - . ID=Thaps997.1;Parent=Thaps997;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 392696 393862 . + . ID=Thaps1000;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT19];external_name=Thaps1000;logic_name=jgi_thaps3 chr1 ensembl transcript 392696 393862 . + . ID=Thaps1000;Parent=Thaps1000;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 392696 393862 . + 0 ID=Thaps1000;Parent=Thaps1000;rank=1 chr1 . exon 392696 393862 . + . ID=Thaps1000.1;Parent=Thaps1000;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 396286 400069 . - . ID=Thaps20617;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT20];external_name=Thaps20617;logic_name=jgi_thaps3 chr1 ensembl transcript 396286 400069 . - . ID=Thaps20617;Parent=Thaps20617;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 396286 397957 . - 0 ID=Thaps20617;Parent=Thaps20617;rank=3 chr1 . exon 396286 397957 . - . ID=Thaps20617.3;Parent=Thaps20617;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 398036 398729 . - 0 ID=Thaps20617;Parent=Thaps20617;rank=2 chr1 . exon 398036 398729 . - . ID=Thaps20617.2;Parent=Thaps20617;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 398785 400069 . - 0 ID=Thaps20617;Parent=Thaps20617;rank=1 chr1 . exon 398785 400069 . - . ID=Thaps20617.1;Parent=Thaps20617;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 390884 391474 . + . ID=Thaps260784;biotype=protein_coding;description=Sec14-like cytosolic factor [Source:UniProtKB/TrEMBL%3BAcc:B8BT18];external_name=Thaps260784;logic_name=jgi_thaps3 chr1 ensembl transcript 390884 391474 . + . ID=Thaps260784;Parent=Thaps260784;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 390884 390995 . + 0 ID=Thaps260784;Parent=Thaps260784;rank=1 chr1 . exon 390884 390995 . + . ID=Thaps260784.1;Parent=Thaps260784;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 391074 391474 . + 0 ID=Thaps260784;Parent=Thaps260784;rank=2 chr1 . exon 391074 391474 . + . ID=Thaps260784.2;Parent=Thaps260784;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 399971 400000 . ? . description=trf chr1 . repeat_region 399975 400000 . ? . description=dust chr1 . repeat_region 401696 401725 . ? . description=dust chr1 . repeat_region 404409 404442 . ? . description=trf chr1 ensembl protein_coding_gene 406557 407504 . + . ID=Thaps1005;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT24];external_name=Thaps1005;logic_name=jgi_thaps3 chr1 ensembl transcript 406557 407504 . + . ID=Thaps1005;Parent=Thaps1005;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 406557 407504 . + 0 ID=Thaps1005;Parent=Thaps1005;rank=1 chr1 . exon 406557 407504 . + . ID=Thaps1005.1;Parent=Thaps1005;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 403762 405561 . + . ID=Thaps20618;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT22];external_name=Thaps20618;logic_name=jgi_thaps3 chr1 ensembl transcript 403762 405561 . + . ID=Thaps20618;Parent=Thaps20618;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 403762 404820 . + 0 ID=Thaps20618;Parent=Thaps20618;rank=1 chr1 . exon 403762 404820 . + . ID=Thaps20618.1;Parent=Thaps20618;constitutive=1;rank=1 chr1 . CDS 404905 405561 . + 0 ID=Thaps20618;Parent=Thaps20618;rank=2 chr1 . exon 404905 405561 . + . ID=Thaps20618.2;Parent=Thaps20618;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 407552 408969 . - . ID=Thaps260785;biotype=protein_coding;description=Ferric reductase-like transmembrane component [Source:UniProtKB/TrEMBL%3BAcc:B8BT25];external_name=Thaps260785;logic_name=jgi_thaps3 chr1 ensembl transcript 407552 408969 . - . ID=Thaps260785;Parent=Thaps260785;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 407552 408161 . - 0 ID=Thaps260785;Parent=Thaps260785;rank=3 chr1 . exon 407552 408161 . - . ID=Thaps260785.3;Parent=Thaps260785;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 408239 408294 . - 0 ID=Thaps260785;Parent=Thaps260785;rank=2 chr1 . exon 408239 408294 . - . ID=Thaps260785.2;Parent=Thaps260785;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 408376 408969 . - 0 ID=Thaps260785;Parent=Thaps260785;rank=1 chr1 . exon 408376 408969 . - . ID=Thaps260785.1;Parent=Thaps260785;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 405652 405873 . - . ID=Thaps30846;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT23];external_name=Thaps30846;logic_name=jgi_thaps3 chr1 ensembl transcript 405652 405873 . - . ID=Thaps30846;Parent=Thaps30846;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 405652 405873 . - 0 ID=Thaps30846;Parent=Thaps30846;rank=1 chr1 . exon 405652 405873 . - . ID=Thaps30846.1;Parent=Thaps30846;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 403060 403257 . + . ID=Thaps31652;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT21];external_name=Thaps31652;logic_name=jgi_thaps3 chr1 ensembl transcript 403060 403257 . + . ID=Thaps31652;Parent=Thaps31652;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 403060 403257 . + 0 ID=Thaps31652;Parent=Thaps31652;rank=1 chr1 . exon 403060 403257 . + . ID=Thaps31652.1;Parent=Thaps31652;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 413572 415580 . + . ID=Thaps20619;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT27];external_name=Thaps20619;logic_name=jgi_thaps3 chr1 ensembl transcript 413572 415580 . + . ID=Thaps20619;Parent=Thaps20619;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 413572 415341 . + 0 ID=Thaps20619;Parent=Thaps20619;rank=1 chr1 . exon 413572 415341 . + . ID=Thaps20619.1;Parent=Thaps20619;constitutive=1;rank=1 chr1 . CDS 415425 415580 . + 0 ID=Thaps20619;Parent=Thaps20619;rank=2 chr1 . exon 415425 415580 . + . ID=Thaps20619.2;Parent=Thaps20619;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 412061 413153 . + . ID=Thaps260786;biotype=protein_coding;description=Glycerol-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BT26];external_name=Thaps260786;logic_name=jgi_thaps3 chr1 ensembl transcript 412061 413153 . + . ID=Thaps260786;Parent=Thaps260786;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 412061 412963 . + 0 ID=Thaps260786;Parent=Thaps260786;rank=1 chr1 . exon 412061 412963 . + . ID=Thaps260786.1;Parent=Thaps260786;constitutive=1;rank=1 chr1 . CDS 413009 413153 . + 0 ID=Thaps260786;Parent=Thaps260786;rank=2 chr1 . exon 413009 413153 . + . ID=Thaps260786.2;Parent=Thaps260786;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 416626 417269 . + . ID=Thaps260787;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT28];external_name=Thaps260787;logic_name=jgi_thaps3 chr1 ensembl transcript 416626 417269 . + . ID=Thaps260787;Parent=Thaps260787;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 416626 417269 . + 0 ID=Thaps260787;Parent=Thaps260787;rank=1 chr1 . exon 416626 417269 . + . ID=Thaps260787.1;Parent=Thaps260787;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 419357 420523 . + . ID=Thaps1009;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT29];external_name=Thaps1009;logic_name=jgi_thaps3 chr1 ensembl transcript 419357 420523 . + . ID=Thaps1009;Parent=Thaps1009;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 419357 420523 . + 0 ID=Thaps1009;Parent=Thaps1009;rank=1 chr1 . exon 419357 420523 . + . ID=Thaps1009.1;Parent=Thaps1009;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 420568 422337 . - . ID=Thaps1010;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT30];external_name=Thaps1010;logic_name=jgi_thaps3 chr1 ensembl transcript 420568 422337 . - . ID=Thaps1010;Parent=Thaps1010;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 420568 422337 . - 0 ID=Thaps1010;Parent=Thaps1010;rank=1 chr1 . exon 420568 422337 . - . ID=Thaps1010.1;Parent=Thaps1010;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 423033 425919 . + . ID=Thaps1011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT31];external_name=Thaps1011;logic_name=jgi_thaps3 chr1 ensembl transcript 423033 425919 . + . ID=Thaps1011;Parent=Thaps1011;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 423033 424257 . + 0 ID=Thaps1011;Parent=Thaps1011;rank=1 chr1 . exon 423033 424257 . + . ID=Thaps1011.1;Parent=Thaps1011;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 424338 424544 . + 0 ID=Thaps1011;Parent=Thaps1011;rank=2 chr1 . exon 424338 424544 . + . ID=Thaps1011.2;Parent=Thaps1011;constitutive=1;rank=2 chr1 . CDS 424625 425919 . + 0 ID=Thaps1011;Parent=Thaps1011;rank=3 chr1 . exon 424625 425919 . + . ID=Thaps1011.3;Parent=Thaps1011;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 425974 432395 . - . ID=Thaps20620;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT32];external_name=Thaps20620;logic_name=jgi_thaps3 chr1 ensembl transcript 425974 432395 . - . ID=Thaps20620;Parent=Thaps20620;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 425974 426129 . - 0 ID=Thaps20620;Parent=Thaps20620;rank=5 chr1 . exon 425974 426129 . - . ID=Thaps20620.5;Parent=Thaps20620;constitutive=1;rank=5 chr1 . CDS 426212 426338 . - 0 ID=Thaps20620;Parent=Thaps20620;rank=4 chr1 . exon 426212 426338 . - . ID=Thaps20620.4;Parent=Thaps20620;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 426419 426587 . - 0 ID=Thaps20620;Parent=Thaps20620;rank=3 chr1 . exon 426419 426587 . - . ID=Thaps20620.3;Parent=Thaps20620;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 426655 431533 . - 0 ID=Thaps20620;Parent=Thaps20620;rank=2 chr1 . exon 426655 431533 . - . ID=Thaps20620.2;Parent=Thaps20620;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 431691 432395 . - 0 ID=Thaps20620;Parent=Thaps20620;rank=1 chr1 ensembl protein_coding_gene 435988 437472 . + . ID=Thaps1014;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT34];external_name=Thaps1014;logic_name=jgi_thaps3 chr1 ensembl transcript 435988 437472 . + . ID=Thaps1014;Parent=Thaps1014;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 435988 437472 . + 0 ID=Thaps1014;Parent=Thaps1014;rank=1 chr1 . exon 435988 437472 . + . ID=Thaps1014.1;Parent=Thaps1014;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 437538 438797 . - . ID=Thaps1015;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT35];external_name=Thaps1015;logic_name=jgi_thaps3 chr1 ensembl transcript 437538 438797 . - . ID=Thaps1015;Parent=Thaps1015;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 437538 438797 . - 0 ID=Thaps1015;Parent=Thaps1015;rank=1 chr1 . exon 437538 438797 . - . ID=Thaps1015.1;Parent=Thaps1015;constitutive=1;rank=1 chr1 . exon 431691 432395 . - . ID=Thaps20620.1;Parent=Thaps20620;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 433077 434729 . + . ID=Thaps260789;biotype=protein_coding;description=Cation efflux protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT33];external_name=Thaps260789;logic_name=jgi_thaps3 chr1 ensembl transcript 433077 434729 . + . ID=Thaps260789;Parent=Thaps260789;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 433077 433745 . + 0 ID=Thaps260789;Parent=Thaps260789;rank=1 chr1 . exon 433077 433745 . + . ID=Thaps260789.1;Parent=Thaps260789;constitutive=1;rank=1 chr1 . CDS 433794 434729 . + 0 ID=Thaps260789;Parent=Thaps260789;rank=2 chr1 . exon 433794 434729 . + . ID=Thaps260789.2;Parent=Thaps260789;constitutive=1;rank=2 chr1 . repeat_region 438953 438973 . ? . description=trf chr1 . biological_region 447139 447141 0.999 - . logic_name=eponine chr1 . repeat_region 447218 447279 . ? . description=dust chr1 . repeat_region 447239 447265 . ? . description=trf chr1 ensembl protein_coding_gene 442375 443723 . - . ID=Thaps1017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT37];external_name=Thaps1017;logic_name=jgi_thaps3 chr1 ensembl transcript 442375 443723 . - . ID=Thaps1017;Parent=Thaps1017;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 442375 442428 . - 0 ID=Thaps1017;Parent=Thaps1017;rank=2 chr1 . exon 442375 442428 . - . ID=Thaps1017.2;Parent=Thaps1017;constitutive=1;rank=2 chr1 . CDS 442671 443723 . - 0 ID=Thaps1017;Parent=Thaps1017;rank=1 chr1 . exon 442671 443723 . - . ID=Thaps1017.1;Parent=Thaps1017;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 447517 448814 . + . ID=Thaps1020;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT40];external_name=Thaps1020;logic_name=jgi_thaps3 chr1 ensembl transcript 447517 448814 . + . ID=Thaps1020;Parent=Thaps1020;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 447517 448406 . + 0 ID=Thaps1020;Parent=Thaps1020;rank=1 chr1 . exon 447517 448406 . + . ID=Thaps1020.1;Parent=Thaps1020;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 448505 448814 . + 0 ID=Thaps1020;Parent=Thaps1020;rank=2 chr1 . exon 448505 448814 . + . ID=Thaps1020.2;Parent=Thaps1020;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 439212 441740 . + . ID=Thaps20621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT36];external_name=Thaps20621;logic_name=jgi_thaps3 chr1 ensembl transcript 439212 441740 . + . ID=Thaps20621;Parent=Thaps20621;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 439212 441740 . + 0 ID=Thaps20621;Parent=Thaps20621;rank=1 chr1 . exon 439212 441740 . + . ID=Thaps20621.1;Parent=Thaps20621;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 444023 445261 . + . ID=Thaps20622;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT38];external_name=Thaps20622;logic_name=jgi_thaps3 chr1 ensembl transcript 444023 445261 . + . ID=Thaps20622;Parent=Thaps20622;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 444023 445261 . + 0 ID=Thaps20622;Parent=Thaps20622;rank=1 chr1 . exon 444023 445261 . + . ID=Thaps20622.1;Parent=Thaps20622;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 445390 446697 . - . ID=Thaps26530;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT39];external_name=Thaps26530;logic_name=jgi_thaps3 chr1 ensembl transcript 445390 446697 . - . ID=Thaps26530;Parent=Thaps26530;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 445390 445872 . - 0 ID=Thaps26530;Parent=Thaps26530;rank=2 chr1 . exon 445390 445872 . - . ID=Thaps26530.2;Parent=Thaps26530;constitutive=1;rank=2 chr1 . CDS 445951 446697 . - 0 ID=Thaps26530;Parent=Thaps26530;rank=1 chr1 . exon 445951 446697 . - . ID=Thaps26530.1;Parent=Thaps26530;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 455974 457006 . - . ID=Thaps1022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT42];external_name=Thaps1022;logic_name=jgi_thaps3 chr1 ensembl transcript 455974 457006 . - . ID=Thaps1022;Parent=Thaps1022;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 455974 456421 . - 0 ID=Thaps1022;Parent=Thaps1022;rank=2 chr1 . exon 455974 456421 . - . ID=Thaps1022.2;Parent=Thaps1022;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 456534 457006 . - 0 ID=Thaps1022;Parent=Thaps1022;rank=1 chr1 . exon 456534 457006 . - . ID=Thaps1022.1;Parent=Thaps1022;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 457279 458148 . + . ID=Thaps1023;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT43];external_name=Thaps1023;logic_name=jgi_thaps3 chr1 ensembl transcript 457279 458148 . + . ID=Thaps1023;Parent=Thaps1023;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 457279 457680 . + 0 ID=Thaps1023;Parent=Thaps1023;rank=1 chr1 . exon 457279 457680 . + . ID=Thaps1023.1;Parent=Thaps1023;constitutive=1;rank=1 chr1 . CDS 457792 458148 . + 0 ID=Thaps1023;Parent=Thaps1023;rank=2 chr1 . exon 457792 458148 . + . ID=Thaps1023.2;Parent=Thaps1023;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 458538 459224 . - . ID=Thaps20625;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT44];external_name=Thaps20625;logic_name=jgi_thaps3 chr1 ensembl transcript 458538 459224 . - . ID=Thaps20625;Parent=Thaps20625;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 458538 459151 . - 0 ID=Thaps20625;Parent=Thaps20625;rank=2 chr1 . exon 458538 459151 . - . ID=Thaps20625.2;Parent=Thaps20625;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 459185 459224 . - 0 ID=Thaps20625;Parent=Thaps20625;rank=1 chr1 ensembl protein_coding_gene 453287 455766 . + . ID=Thaps26536;biotype=protein_coding;description=Sucrose non-fermenting (SNF-1) related serine threonine protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BT41];external_name=SNF1;logic_name=jgi_thaps3 chr1 ensembl transcript 453287 455766 . + . ID=Thaps26536;Parent=Thaps26536;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 453287 453358 . + 0 ID=Thaps26536;Parent=Thaps26536;rank=1 chr1 . exon 453287 453358 . + . ID=Thaps26536.1;Parent=Thaps26536;constitutive=1;rank=1 chr1 . CDS 453727 454530 . + 0 ID=Thaps26536;Parent=Thaps26536;rank=2 chr1 . exon 453727 454530 . + . ID=Thaps26536.2;Parent=Thaps26536;constitutive=1;rank=2 chr1 . CDS 454645 454916 . + 0 ID=Thaps26536;Parent=Thaps26536;rank=3 chr1 . exon 454645 454916 . + . ID=Thaps26536.3;Parent=Thaps26536;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 455160 455301 . + 0 ID=Thaps26536;Parent=Thaps26536;rank=4 chr1 . exon 455160 455301 . + . ID=Thaps26536.4;Parent=Thaps26536;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 455395 455766 . + 0 ID=Thaps26536;Parent=Thaps26536;rank=5 chr1 . exon 455395 455766 . + . ID=Thaps26536.5;Parent=Thaps26536;constitutive=1;rank=5 chr1 . exon 459185 459224 . - . ID=Thaps20625.1;Parent=Thaps20625;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 459524 461919 . + . ID=Thaps20626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT45];external_name=Thaps20626;logic_name=jgi_thaps3 chr1 ensembl transcript 459524 461919 . + . ID=Thaps20626;Parent=Thaps20626;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 459524 459934 . + 0 ID=Thaps20626;Parent=Thaps20626;rank=1 chr1 . exon 459524 459934 . + . ID=Thaps20626.1;Parent=Thaps20626;constitutive=1;rank=1 chr1 . CDS 460034 460860 . + 0 ID=Thaps20626;Parent=Thaps20626;rank=2 chr1 . exon 460034 460860 . + . ID=Thaps20626.2;Parent=Thaps20626;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 460941 461919 . + 0 ID=Thaps20626;Parent=Thaps20626;rank=3 chr1 . exon 460941 461919 . + . ID=Thaps20626.3;Parent=Thaps20626;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 462148 466499 . - . ID=Thaps20627;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT46];external_name=Thaps20627;logic_name=jgi_thaps3 chr1 ensembl transcript 462148 466499 . - . ID=Thaps20627;Parent=Thaps20627;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 462148 465132 . - 0 ID=Thaps20627;Parent=Thaps20627;rank=4 chr1 . exon 462148 465132 . - . ID=Thaps20627.4;Parent=Thaps20627;constitutive=1;rank=4 chr1 . CDS 465224 465772 . - 0 ID=Thaps20627;Parent=Thaps20627;rank=3 chr1 . exon 465224 465772 . - . ID=Thaps20627.3;Parent=Thaps20627;constitutive=1;rank=3 chr1 . CDS 465924 466126 . - 0 ID=Thaps20627;Parent=Thaps20627;rank=2 chr1 . exon 465924 466126 . - . ID=Thaps20627.2;Parent=Thaps20627;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 466490 466499 . - 0 ID=Thaps20627;Parent=Thaps20627;rank=1 chr1 . exon 466490 466499 . - . ID=Thaps20627.1;Parent=Thaps20627;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 467644 469985 . + . ID=Thaps38987;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT47];external_name=Thaps38987;logic_name=jgi_thaps3 chr1 ensembl transcript 467644 469985 . + . ID=Thaps38987;Parent=Thaps38987;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 467644 468000 . + 0 ID=Thaps38987;Parent=Thaps38987;rank=1 chr1 . exon 467644 468000 . + . ID=Thaps38987.1;Parent=Thaps38987;constitutive=1;rank=1 chr1 . CDS 468099 468287 . + 0 ID=Thaps38987;Parent=Thaps38987;rank=2 chr1 . exon 468099 468287 . + . ID=Thaps38987.2;Parent=Thaps38987;constitutive=1;rank=2 chr1 . CDS 468368 468501 . + 0 ID=Thaps38987;Parent=Thaps38987;rank=3 chr1 . exon 468368 468501 . + . ID=Thaps38987.3;Parent=Thaps38987;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 468581 468723 . + 0 ID=Thaps38987;Parent=Thaps38987;rank=4 chr1 . exon 468581 468723 . + . ID=Thaps38987.4;Parent=Thaps38987;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 468802 469114 . + 0 ID=Thaps38987;Parent=Thaps38987;rank=5 chr1 . exon 468802 469114 . + . ID=Thaps38987.5;Parent=Thaps38987;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 469187 469739 . + 0 ID=Thaps38987;Parent=Thaps38987;rank=6 chr1 . CDS 469827 469985 . + 0 ID=Thaps38987;Parent=Thaps38987;rank=7 chr1 ensembl protein_coding_gene 470147 471456 . - . ID=Thaps20629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT48];external_name=Thaps20629;logic_name=jgi_thaps3 chr1 ensembl transcript 470147 471456 . - . ID=Thaps20629;Parent=Thaps20629;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 470147 470780 . - 0 ID=Thaps20629;Parent=Thaps20629;rank=3 chr1 . exon 470147 470780 . - . ID=Thaps20629.3;Parent=Thaps20629;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 470905 471197 . - 0 ID=Thaps20629;Parent=Thaps20629;rank=2 chr1 . exon 470905 471197 . - . ID=Thaps20629.2;Parent=Thaps20629;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 471289 471456 . - 0 ID=Thaps20629;Parent=Thaps20629;rank=1 chr1 . exon 471289 471456 . - . ID=Thaps20629.1;Parent=Thaps20629;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 475374 479384 . - . ID=Thaps20630;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT49];external_name=Thaps20630;logic_name=jgi_thaps3 chr1 ensembl transcript 475374 479384 . - . ID=Thaps20630;Parent=Thaps20630;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 475374 475634 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=14 chr1 . exon 475374 475634 . - . ID=Thaps20630.14;Parent=Thaps20630;constitutive=1;rank=14 chr1 . CDS 475735 475745 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=13 chr1 . exon 475735 475745 . - . ID=Thaps20630.13;Parent=Thaps20630;constitutive=1;ensembl_end_phase=2;rank=13 chr1 . CDS 475846 475902 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=12 chr1 . exon 475846 475902 . - . ID=Thaps20630.12;Parent=Thaps20630;constitutive=1;rank=12 chr1 . CDS 475977 476062 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=11 chr1 . exon 475977 476062 . - . ID=Thaps20630.11;Parent=Thaps20630;constitutive=1;ensembl_end_phase=2;rank=11 chr1 . CDS 476150 476891 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=10 chr1 . exon 476150 476891 . - . ID=Thaps20630.10;Parent=Thaps20630;constitutive=1;ensembl_end_phase=1;rank=10 chr1 . CDS 476966 477285 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=9 chr1 . exon 476966 477285 . - . ID=Thaps20630.9;Parent=Thaps20630;constitutive=1;ensembl_end_phase=2;rank=9 chr1 . CDS 477364 477418 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=8 chr1 . exon 477364 477418 . - . ID=Thaps20630.8;Parent=Thaps20630;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . CDS 477501 477552 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=7 chr1 . exon 477501 477552 . - . ID=Thaps20630.7;Parent=Thaps20630;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 477619 477830 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=6 chr1 . exon 477619 477830 . - . ID=Thaps20630.6;Parent=Thaps20630;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 477904 478306 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=5 chr1 . exon 477904 478306 . - . ID=Thaps20630.5;Parent=Thaps20630;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 478384 478516 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=4 chr1 . exon 478384 478516 . - . ID=Thaps20630.4;Parent=Thaps20630;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 478660 478772 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=3 chr1 . exon 478660 478772 . - . ID=Thaps20630.3;Parent=Thaps20630;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 478867 479213 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=2 chr1 . CDS 479288 479384 . - 0 ID=Thaps20630;Parent=Thaps20630;rank=1 chr1 . exon 469187 469739 . + . ID=Thaps38987.6;Parent=Thaps38987;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . exon 469827 469985 . + . ID=Thaps38987.7;Parent=Thaps38987;constitutive=1;rank=7 chr1 . repeat_region 479198 479214 . ? . description=dust chr1 . repeat_region 485165 485174 . ? . description=dust chr1 ensembl protein_coding_gene 485159 486575 . + . ID=Thaps1031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT51];external_name=Thaps1031;logic_name=jgi_thaps3 chr1 ensembl transcript 485159 486575 . + . ID=Thaps1031;Parent=Thaps1031;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 485159 486166 . + 0 ID=Thaps1031;Parent=Thaps1031;rank=1 chr1 . exon 485159 486166 . + . ID=Thaps1031.1;Parent=Thaps1031;constitutive=1;rank=1 chr1 . CDS 486246 486575 . + 0 ID=Thaps1031;Parent=Thaps1031;rank=2 chr1 . exon 486246 486575 . + . ID=Thaps1031.2;Parent=Thaps1031;constitutive=1;rank=2 chr1 . exon 478867 479213 . - . ID=Thaps20630.2;Parent=Thaps20630;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 479288 479384 . - . ID=Thaps20630.1;Parent=Thaps20630;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 488004 488550 . + . ID=Thaps267946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT53];external_name=Thaps267946;logic_name=jgi_thaps3 chr1 ensembl transcript 488004 488550 . + . ID=Thaps267946;Parent=Thaps267946;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 488004 488117 . + 0 ID=Thaps267946;Parent=Thaps267946;rank=1 chr1 . exon 488004 488117 . + . ID=Thaps267946.1;Parent=Thaps267946;constitutive=1;rank=1 chr1 . CDS 488203 488411 . + 0 ID=Thaps267946;Parent=Thaps267946;rank=2 chr1 . exon 488203 488411 . + . ID=Thaps267946.2;Parent=Thaps267946;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 488439 488550 . + 0 ID=Thaps267946;Parent=Thaps267946;rank=3 chr1 . exon 488439 488550 . + . ID=Thaps267946.3;Parent=Thaps267946;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 487470 487712 . + . ID=Thaps30804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT52];external_name=Thaps30804;logic_name=jgi_thaps3 chr1 ensembl transcript 487470 487712 . + . ID=Thaps30804;Parent=Thaps30804;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 487470 487712 . + 0 ID=Thaps30804;Parent=Thaps30804;rank=1 chr1 . exon 487470 487712 . + . ID=Thaps30804.1;Parent=Thaps30804;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 480498 481618 . - . ID=Thaps31069;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT50];external_name=Thaps31069;logic_name=jgi_thaps3 chr1 ensembl transcript 480498 481618 . - . ID=Thaps31069;Parent=Thaps31069;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 480498 480642 . - 0 ID=Thaps31069;Parent=Thaps31069;rank=3 chr1 . exon 480498 480642 . - . ID=Thaps31069.3;Parent=Thaps31069;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 480820 481235 . - 0 ID=Thaps31069;Parent=Thaps31069;rank=2 chr1 . exon 480820 481235 . - . ID=Thaps31069.2;Parent=Thaps31069;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 481322 481618 . - 0 ID=Thaps31069;Parent=Thaps31069;rank=1 chr1 . exon 481322 481618 . - . ID=Thaps31069.1;Parent=Thaps31069;constitutive=1;rank=1 chr1 . repeat_region 493744 493798 . ? . description=trf chr1 . repeat_region 494311 494387 . ? . description=trf chr1 ensembl protein_coding_gene 498291 499920 . + . ID=Thaps1036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT57];external_name=Thaps1036;logic_name=jgi_thaps3 chr1 ensembl transcript 498291 499920 . + . ID=Thaps1036;Parent=Thaps1036;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 498291 498806 . + 0 ID=Thaps1036;Parent=Thaps1036;rank=1 chr1 . exon 498291 498806 . + . ID=Thaps1036.1;Parent=Thaps1036;constitutive=1;rank=1 chr1 . CDS 498928 499920 . + 0 ID=Thaps1036;Parent=Thaps1036;rank=2 chr1 ensembl protein_coding_gene 489603 491517 . - . ID=Thaps20633;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT54];external_name=Thaps20633;logic_name=jgi_thaps3 chr1 ensembl transcript 489603 491517 . - . ID=Thaps20633;Parent=Thaps20633;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 489603 490340 . - 0 ID=Thaps20633;Parent=Thaps20633;rank=3 chr1 . exon 489603 490340 . - . ID=Thaps20633.3;Parent=Thaps20633;constitutive=1;rank=3 chr1 . CDS 490424 491112 . - 0 ID=Thaps20633;Parent=Thaps20633;rank=2 chr1 . exon 490424 491112 . - . ID=Thaps20633.2;Parent=Thaps20633;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 491256 491517 . - 0 ID=Thaps20633;Parent=Thaps20633;rank=1 chr1 . exon 491256 491517 . - . ID=Thaps20633.1;Parent=Thaps20633;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 491815 492936 . - . ID=Thaps267948;biotype=protein_coding;description=Ubiquinone biosynthesis monooxgenase [Source:UniProtKB/TrEMBL%3BAcc:B8BT55];external_name=Thaps267948;logic_name=jgi_thaps3 chr1 ensembl transcript 491815 492936 . - . ID=Thaps267948;Parent=Thaps267948;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 491815 492431 . - 0 ID=Thaps267948;Parent=Thaps267948;rank=3 chr1 . exon 491815 492431 . - . ID=Thaps267948.3;Parent=Thaps267948;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 492516 492620 . - 0 ID=Thaps267948;Parent=Thaps267948;rank=2 chr1 . exon 492516 492620 . - . ID=Thaps267948.2;Parent=Thaps267948;constitutive=1;rank=2 chr1 . CDS 492657 492936 . - 0 ID=Thaps267948;Parent=Thaps267948;rank=1 chr1 . exon 492657 492936 . - . ID=Thaps267948.1;Parent=Thaps267948;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 495325 497118 . + . ID=Thaps38991;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT56];external_name=Thaps38991;logic_name=jgi_thaps3 chr1 ensembl transcript 495325 497118 . + . ID=Thaps38991;Parent=Thaps38991;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 495325 495442 . + 0 ID=Thaps38991;Parent=Thaps38991;rank=1 chr1 . exon 495325 495442 . + . ID=Thaps38991.1;Parent=Thaps38991;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 495617 495796 . + 0 ID=Thaps38991;Parent=Thaps38991;rank=2 chr1 . exon 495617 495796 . + . ID=Thaps38991.2;Parent=Thaps38991;constitutive=1;rank=2 chr1 . CDS 495860 495972 . + 0 ID=Thaps38991;Parent=Thaps38991;rank=3 chr1 . exon 495860 495972 . + . ID=Thaps38991.3;Parent=Thaps38991;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 496075 496306 . + 0 ID=Thaps38991;Parent=Thaps38991;rank=4 chr1 . exon 496075 496306 . + . ID=Thaps38991.4;Parent=Thaps38991;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 496466 497118 . + 0 ID=Thaps38991;Parent=Thaps38991;rank=5 chr1 . exon 496466 497118 . + . ID=Thaps38991.5;Parent=Thaps38991;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . repeat_region 502053 502071 . ? . description=dust chr1 . exon 498928 499920 . + . ID=Thaps1036.2;Parent=Thaps1036;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 504670 505311 . + . ID=Thaps1038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT59];external_name=Thaps1038;logic_name=jgi_thaps3 chr1 ensembl transcript 504670 505311 . + . ID=Thaps1038;Parent=Thaps1038;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 504670 505311 . + 0 ID=Thaps1038;Parent=Thaps1038;rank=1 chr1 . exon 504670 505311 . + . ID=Thaps1038.1;Parent=Thaps1038;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 506938 507984 . + . ID=Thaps1040;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT61];external_name=Thaps1040;logic_name=jgi_thaps3 chr1 ensembl transcript 506938 507984 . + . ID=Thaps1040;Parent=Thaps1040;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 506938 507984 . + 0 ID=Thaps1040;Parent=Thaps1040;rank=1 chr1 . exon 506938 507984 . + . ID=Thaps1040.1;Parent=Thaps1040;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 500225 500632 . - . ID=Thaps19059;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT58];external_name=Thaps19059;logic_name=jgi_thaps3 chr1 ensembl transcript 500225 500632 . - . ID=Thaps19059;Parent=Thaps19059;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 500225 500632 . - 0 ID=Thaps19059;Parent=Thaps19059;rank=1 chr1 . exon 500225 500632 . - . ID=Thaps19059.1;Parent=Thaps19059;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 508151 511577 . - . ID=Thaps20637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT62];external_name=Thaps20637;logic_name=jgi_thaps3 chr1 ensembl transcript 508151 511577 . - . ID=Thaps20637;Parent=Thaps20637;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 508151 508906 . - 0 ID=Thaps20637;Parent=Thaps20637;rank=7 chr1 . exon 508151 508906 . - . ID=Thaps20637.7;Parent=Thaps20637;constitutive=1;rank=7 chr1 . CDS 509002 509306 . - 0 ID=Thaps20637;Parent=Thaps20637;rank=6 chr1 . CDS 509381 509651 . - 0 ID=Thaps20637;Parent=Thaps20637;rank=5 chr1 . CDS 509732 510199 . - 0 ID=Thaps20637;Parent=Thaps20637;rank=4 chr1 . CDS 510280 511027 . - 0 ID=Thaps20637;Parent=Thaps20637;rank=3 chr1 . CDS 511155 511259 . - 0 ID=Thaps20637;Parent=Thaps20637;rank=2 chr1 . CDS 511411 511577 . - 0 ID=Thaps20637;Parent=Thaps20637;rank=1 chr1 ensembl protein_coding_gene 505420 506292 . - . ID=Thaps260799;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT60];external_name=Thaps260799;logic_name=jgi_thaps3 chr1 ensembl transcript 505420 506292 . - . ID=Thaps260799;Parent=Thaps260799;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 505420 505584 . - 0 ID=Thaps260799;Parent=Thaps260799;rank=4 chr1 . exon 505420 505584 . - . ID=Thaps260799.4;Parent=Thaps260799;constitutive=1;rank=4 chr1 . CDS 505670 505768 . - 0 ID=Thaps260799;Parent=Thaps260799;rank=3 chr1 . exon 505670 505768 . - . ID=Thaps260799.3;Parent=Thaps260799;constitutive=1;rank=3 chr1 . CDS 505886 505974 . - 0 ID=Thaps260799;Parent=Thaps260799;rank=2 chr1 . exon 505886 505974 . - . ID=Thaps260799.2;Parent=Thaps260799;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 506131 506292 . - 0 ID=Thaps260799;Parent=Thaps260799;rank=1 chr1 . exon 506131 506292 . - . ID=Thaps260799.1;Parent=Thaps260799;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 511803 514941 . - . ID=Thaps1042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT63];external_name=Thaps1042;logic_name=jgi_thaps3 chr1 ensembl transcript 511803 514941 . - . ID=Thaps1042;Parent=Thaps1042;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 511803 512544 . - 0 ID=Thaps1042;Parent=Thaps1042;rank=4 chr1 . exon 511803 512544 . - . ID=Thaps1042.4;Parent=Thaps1042;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 512631 512757 . - 0 ID=Thaps1042;Parent=Thaps1042;rank=3 chr1 . exon 512631 512757 . - . ID=Thaps1042.3;Parent=Thaps1042;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 512841 514338 . - 0 ID=Thaps1042;Parent=Thaps1042;rank=2 chr1 . exon 512841 514338 . - . ID=Thaps1042.2;Parent=Thaps1042;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 514429 514941 . - 0 ID=Thaps1042;Parent=Thaps1042;rank=1 chr1 . exon 514429 514941 . - . ID=Thaps1042.1;Parent=Thaps1042;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 518615 519343 . + . ID=Thaps1044;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT65];external_name=Thaps1044;logic_name=jgi_thaps3 chr1 ensembl transcript 518615 519343 . + . ID=Thaps1044;Parent=Thaps1044;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 518615 519343 . + 0 ID=Thaps1044;Parent=Thaps1044;rank=1 chr1 . exon 518615 519343 . + . ID=Thaps1044.1;Parent=Thaps1044;constitutive=1;rank=1 chr1 . exon 509002 509306 . - . ID=Thaps20637.6;Parent=Thaps20637;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . exon 509381 509651 . - . ID=Thaps20637.5;Parent=Thaps20637;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . exon 509732 510199 . - . ID=Thaps20637.4;Parent=Thaps20637;constitutive=1;rank=4 chr1 . exon 510280 511027 . - . ID=Thaps20637.3;Parent=Thaps20637;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . exon 511155 511259 . - . ID=Thaps20637.2;Parent=Thaps20637;constitutive=1;rank=2 chr1 . exon 511411 511577 . - . ID=Thaps20637.1;Parent=Thaps20637;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 515481 518122 . - . ID=Thaps26545;biotype=protein_coding;description=Mcm6-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT64];external_name=Thaps26545;logic_name=jgi_thaps3 chr1 ensembl transcript 515481 518122 . - . ID=Thaps26545;Parent=Thaps26545;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 515481 515482 . - 0 ID=Thaps26545;Parent=Thaps26545;rank=5 chr1 . exon 515481 515482 . - . ID=Thaps26545.5;Parent=Thaps26545;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 515585 516590 . - 0 ID=Thaps26545;Parent=Thaps26545;rank=4 chr1 . exon 515585 516590 . - . ID=Thaps26545.4;Parent=Thaps26545;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 516686 516826 . - 0 ID=Thaps26545;Parent=Thaps26545;rank=3 chr1 . exon 516686 516826 . - . ID=Thaps26545.3;Parent=Thaps26545;constitutive=1;rank=3 chr1 . CDS 516896 517822 . - 0 ID=Thaps26545;Parent=Thaps26545;rank=2 chr1 . exon 516896 517822 . - . ID=Thaps26545.2;Parent=Thaps26545;constitutive=1;rank=2 chr1 . CDS 517940 518122 . - 0 ID=Thaps26545;Parent=Thaps26545;rank=1 chr1 . exon 517940 518122 . - . ID=Thaps26545.1;Parent=Thaps26545;constitutive=1;rank=1 chr1 . repeat_region 520653 520672 . ? . description=trf chr1 . repeat_region 520653 520672 . ? . description=dust chr1 . repeat_region 526709 526716 . ? . description=dust chr1 ensembl protein_coding_gene 528426 530069 . - . ID=Thaps1049;biotype=protein_coding;description=Oxidoreductase [Source:UniProtKB/TrEMBL%3BAcc:B8BT70];external_name=Thaps1049;logic_name=jgi_thaps3 chr1 ensembl transcript 528426 530069 . - . ID=Thaps1049;Parent=Thaps1049;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 528426 528823 . - 0 ID=Thaps1049;Parent=Thaps1049;rank=4 chr1 . exon 528426 528823 . - . ID=Thaps1049.4;Parent=Thaps1049;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 528911 529274 . - 0 ID=Thaps1049;Parent=Thaps1049;rank=3 chr1 . CDS 529380 529693 . - 0 ID=Thaps1049;Parent=Thaps1049;rank=2 chr1 . CDS 529814 530069 . - 0 ID=Thaps1049;Parent=Thaps1049;rank=1 chr1 ensembl protein_coding_gene 520548 521933 . + . ID=Thaps20639;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT67];external_name=Thaps20639;logic_name=jgi_thaps3 chr1 ensembl transcript 520548 521933 . + . ID=Thaps20639;Parent=Thaps20639;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 520548 521933 . + 0 ID=Thaps20639;Parent=Thaps20639;rank=1 chr1 . exon 520548 521933 . + . ID=Thaps20639.1;Parent=Thaps20639;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 522467 524335 . - . ID=Thaps20640;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT68];external_name=Thaps20640;logic_name=jgi_thaps3 chr1 ensembl transcript 522467 524335 . - . ID=Thaps20640;Parent=Thaps20640;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 522467 524335 . - 0 ID=Thaps20640;Parent=Thaps20640;rank=1 chr1 . exon 522467 524335 . - . ID=Thaps20640.1;Parent=Thaps20640;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 525011 526396 . - . ID=Thaps20641;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT69];external_name=Thaps20641;logic_name=jgi_thaps3 chr1 ensembl transcript 525011 526396 . - . ID=Thaps20641;Parent=Thaps20641;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 525011 526396 . - 0 ID=Thaps20641;Parent=Thaps20641;rank=1 chr1 . exon 525011 526396 . - . ID=Thaps20641.1;Parent=Thaps20641;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 519530 520045 . - . ID=Thaps31510;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT66];external_name=Thaps31510;logic_name=jgi_thaps3 chr1 ensembl transcript 519530 520045 . - . ID=Thaps31510;Parent=Thaps31510;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 519530 520045 . - 0 ID=Thaps31510;Parent=Thaps31510;rank=1 chr1 . exon 519530 520045 . - . ID=Thaps31510.1;Parent=Thaps31510;constitutive=1;rank=1 chr1 . exon 528911 529274 . - . ID=Thaps1049.3;Parent=Thaps1049;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . exon 529380 529693 . - . ID=Thaps1049.2;Parent=Thaps1049;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 529814 530069 . - . ID=Thaps1049.1;Parent=Thaps1049;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 532895 533446 . - . ID=Thaps1051;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT72];external_name=Thaps1051;logic_name=jgi_thaps3 chr1 ensembl transcript 532895 533446 . - . ID=Thaps1051;Parent=Thaps1051;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 532895 533446 . - 0 ID=Thaps1051;Parent=Thaps1051;rank=1 chr1 . exon 532895 533446 . - . ID=Thaps1051.1;Parent=Thaps1051;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 533963 534931 . + . ID=Thaps1052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT73];external_name=Thaps1052;logic_name=jgi_thaps3 chr1 ensembl transcript 533963 534931 . + . ID=Thaps1052;Parent=Thaps1052;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 533963 534931 . + 0 ID=Thaps1052;Parent=Thaps1052;rank=1 chr1 . exon 533963 534931 . + . ID=Thaps1052.1;Parent=Thaps1052;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 535510 536070 . + . ID=Thaps1053;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT74];external_name=Thaps1053;logic_name=jgi_thaps3 chr1 ensembl transcript 535510 536070 . + . ID=Thaps1053;Parent=Thaps1053;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 535510 536070 . + 0 ID=Thaps1053;Parent=Thaps1053;rank=1 chr1 . exon 535510 536070 . + . ID=Thaps1053.1;Parent=Thaps1053;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 536421 536981 . - . ID=Thaps1054;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT75];external_name=Thaps1054;logic_name=jgi_thaps3 chr1 ensembl transcript 536421 536981 . - . ID=Thaps1054;Parent=Thaps1054;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 536421 536981 . - 0 ID=Thaps1054;Parent=Thaps1054;rank=1 chr1 . exon 536421 536981 . - . ID=Thaps1054.1;Parent=Thaps1054;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 537682 539175 . + . ID=Thaps1055;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT76];external_name=Thaps1055;logic_name=jgi_thaps3 chr1 ensembl transcript 537682 539175 . + . ID=Thaps1055;Parent=Thaps1055;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 537682 539175 . + 0 ID=Thaps1055;Parent=Thaps1055;rank=1 chr1 . exon 537682 539175 . + . ID=Thaps1055.1;Parent=Thaps1055;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 530601 532130 . + . ID=Thaps26548;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT71];external_name=Thaps26548;logic_name=jgi_thaps3 chr1 ensembl transcript 530601 532130 . + . ID=Thaps26548;Parent=Thaps26548;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 530601 530751 . + 0 ID=Thaps26548;Parent=Thaps26548;rank=1 chr1 . exon 530601 530751 . + . ID=Thaps26548.1;Parent=Thaps26548;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 530872 531185 . + 0 ID=Thaps26548;Parent=Thaps26548;rank=2 chr1 . exon 530872 531185 . + . ID=Thaps26548.2;Parent=Thaps26548;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 531291 531654 . + 0 ID=Thaps26548;Parent=Thaps26548;rank=3 chr1 . exon 531291 531654 . + . ID=Thaps26548.3;Parent=Thaps26548;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 531742 532130 . + 0 ID=Thaps26548;Parent=Thaps26548;rank=4 chr1 . exon 531742 532130 . + . ID=Thaps26548.4;Parent=Thaps26548;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . repeat_region 538590 538958 . ? . description=trf chr1 . repeat_region 539499 539514 . ? . description=dust chr1 . repeat_region 546414 546448 . ? . description=dust chr1 ensembl protein_coding_gene 540683 541342 . + . ID=Thaps1056;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT77];external_name=Thaps1056;logic_name=jgi_thaps3 chr1 ensembl transcript 540683 541342 . + . ID=Thaps1056;Parent=Thaps1056;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 540683 540883 . + 0 ID=Thaps1056;Parent=Thaps1056;rank=1 chr1 . exon 540683 540883 . + . ID=Thaps1056.1;Parent=Thaps1056;constitutive=1;rank=1 chr1 . CDS 541058 541342 . + 0 ID=Thaps1056;Parent=Thaps1056;rank=2 chr1 . exon 541058 541342 . + . ID=Thaps1056.2;Parent=Thaps1056;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 542056 545588 . - . ID=Thaps1057;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT78];external_name=Thaps1057;logic_name=jgi_thaps3 chr1 ensembl transcript 542056 545588 . - . ID=Thaps1057;Parent=Thaps1057;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 542056 542918 . - 0 ID=Thaps1057;Parent=Thaps1057;rank=4 chr1 . exon 542056 542918 . - . ID=Thaps1057.4;Parent=Thaps1057;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 542999 543153 . - 0 ID=Thaps1057;Parent=Thaps1057;rank=3 chr1 . exon 542999 543153 . - . ID=Thaps1057.3;Parent=Thaps1057;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 543280 544830 . - 0 ID=Thaps1057;Parent=Thaps1057;rank=2 chr1 . exon 543280 544830 . - . ID=Thaps1057.2;Parent=Thaps1057;constitutive=1;rank=2 chr1 . CDS 545260 545588 . - 0 ID=Thaps1057;Parent=Thaps1057;rank=1 chr1 . exon 545260 545588 . - . ID=Thaps1057.1;Parent=Thaps1057;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 545866 546642 . + . ID=Thaps1058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT79];external_name=Thaps1058;logic_name=jgi_thaps3 chr1 ensembl transcript 545866 546642 . + . ID=Thaps1058;Parent=Thaps1058;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 545866 546642 . + 0 ID=Thaps1058;Parent=Thaps1058;rank=1 chr1 . exon 545866 546642 . + . ID=Thaps1058.1;Parent=Thaps1058;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 547404 548306 . + . ID=Thaps31412;biotype=protein_coding;description=Methylenetetrahydrofolate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BT80];external_name=Thaps31412;logic_name=jgi_thaps3 chr1 ensembl transcript 547404 548306 . + . ID=Thaps31412;Parent=Thaps31412;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 547404 547581 . + 0 ID=Thaps31412;Parent=Thaps31412;rank=1 chr1 . exon 547404 547581 . + . ID=Thaps31412.1;Parent=Thaps31412;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 547636 547763 . + 0 ID=Thaps31412;Parent=Thaps31412;rank=2 chr1 . exon 547636 547763 . + . ID=Thaps31412.2;Parent=Thaps31412;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 547812 548306 . + 0 ID=Thaps31412;Parent=Thaps31412;rank=3 chr1 . exon 547812 548306 . + . ID=Thaps31412.3;Parent=Thaps31412;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 550606 551070 . + . ID=Thaps1060;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPV5];external_name=Thaps1060;logic_name=jgi_thaps3 chr1 ensembl transcript 550606 551070 . + . ID=Thaps1060;Parent=Thaps1060;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 550606 551070 . + 0 ID=Thaps1060;Parent=Thaps1060;rank=1 chr1 . exon 550606 551070 . + . ID=Thaps1060.1;Parent=Thaps1060;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 557220 558494 . + . ID=Thaps1063;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPV8];external_name=Thaps1063;logic_name=jgi_thaps3 chr1 ensembl transcript 557220 558494 . + . ID=Thaps1063;Parent=Thaps1063;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 557220 558494 . + 0 ID=Thaps1063;Parent=Thaps1063;rank=1 chr1 . exon 557220 558494 . + . ID=Thaps1063.1;Parent=Thaps1063;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 554353 557104 . - . ID=Thaps20643;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPV7];external_name=Thaps20643;logic_name=jgi_thaps3 chr1 ensembl transcript 554353 557104 . - . ID=Thaps20643;Parent=Thaps20643;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 554353 554757 . - 0 ID=Thaps20643;Parent=Thaps20643;rank=3 chr1 . exon 554353 554757 . - . ID=Thaps20643.3;Parent=Thaps20643;constitutive=1;rank=3 chr1 . CDS 554828 555822 . - 0 ID=Thaps20643;Parent=Thaps20643;rank=2 chr1 . exon 554828 555822 . - . ID=Thaps20643.2;Parent=Thaps20643;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 555856 557104 . - 0 ID=Thaps20643;Parent=Thaps20643;rank=1 chr1 . exon 555856 557104 . - . ID=Thaps20643.1;Parent=Thaps20643;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 548885 550399 . - . ID=Thaps260805;biotype=protein_coding;description=SRP54%2C signal recognition particle 54 kDa protein 2-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BT81];external_name=Thaps260805;logic_name=jgi_thaps3 chr1 ensembl transcript 548885 550399 . - . ID=Thaps260805;Parent=Thaps260805;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 548885 549322 . - 0 ID=Thaps260805;Parent=Thaps260805;rank=3 chr1 . exon 548885 549322 . - . ID=Thaps260805.3;Parent=Thaps260805;constitutive=1;rank=3 chr1 . CDS 549402 549439 . - 0 ID=Thaps260805;Parent=Thaps260805;rank=2 chr1 . exon 549402 549439 . - . ID=Thaps260805.2;Parent=Thaps260805;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 549521 550399 . - 0 ID=Thaps260805;Parent=Thaps260805;rank=1 chr1 . exon 549521 550399 . - . ID=Thaps260805.1;Parent=Thaps260805;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 551996 554313 . + . ID=Thaps31665;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPV6];external_name=Thaps31665;logic_name=jgi_thaps3 chr1 ensembl transcript 551996 554313 . + . ID=Thaps31665;Parent=Thaps31665;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 551996 552083 . + 0 ID=Thaps31665;Parent=Thaps31665;rank=1 chr1 . exon 551996 552083 . + . ID=Thaps31665.1;Parent=Thaps31665;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 552186 552620 . + 0 ID=Thaps31665;Parent=Thaps31665;rank=2 chr1 . exon 552186 552620 . + . ID=Thaps31665.2;Parent=Thaps31665;constitutive=1;rank=2 chr1 . CDS 552703 552785 . + 0 ID=Thaps31665;Parent=Thaps31665;rank=3 chr1 . exon 552703 552785 . + . ID=Thaps31665.3;Parent=Thaps31665;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 552877 554313 . + 0 ID=Thaps31665;Parent=Thaps31665;rank=4 chr1 . exon 552877 554313 . + . ID=Thaps31665.4;Parent=Thaps31665;constitutive=1;rank=4 chr1 . repeat_region 558924 558933 . ? . description=dust chr1 . repeat_region 561033 561040 . ? . description=dust chr1 . repeat_region 562308 562317 . ? . description=dust chr1 . repeat_region 564411 564421 . ? . description=dust chr1 . repeat_region 566221 566296 . + . description=MuDR1_TP chr1 ensembl protein_coding_gene 559401 561974 . + . ID=Thaps20644;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPV9];external_name=Thaps20644;logic_name=jgi_thaps3 chr1 ensembl transcript 559401 561974 . + . ID=Thaps20644;Parent=Thaps20644;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 559401 561974 . + 0 ID=Thaps20644;Parent=Thaps20644;rank=1 chr1 . exon 559401 561974 . + . ID=Thaps20644.1;Parent=Thaps20644;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 566376 567617 . - . ID=Thaps20647;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPW1];external_name=Thaps20647;logic_name=jgi_thaps3 chr1 ensembl transcript 566376 567617 . - . ID=Thaps20647;Parent=Thaps20647;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 566376 567617 . - 0 ID=Thaps20647;Parent=Thaps20647;rank=1 chr1 . exon 566376 567617 . - . ID=Thaps20647.1;Parent=Thaps20647;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 567931 568917 . + . ID=Thaps20648;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPW2];external_name=Thaps20648;logic_name=jgi_thaps3 chr1 ensembl transcript 567931 568917 . + . ID=Thaps20648;Parent=Thaps20648;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 567931 568917 . + 0 ID=Thaps20648;Parent=Thaps20648;rank=1 chr1 . exon 567931 568917 . + . ID=Thaps20648.1;Parent=Thaps20648;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 563339 565895 . - . ID=Thaps267952;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPW0];external_name=Thaps267952;logic_name=jgi_thaps3 chr1 ensembl transcript 563339 565895 . - . ID=Thaps267952;Parent=Thaps267952;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 563339 564322 . - 0 ID=Thaps267952;Parent=Thaps267952;rank=2 chr1 . exon 563339 564322 . - . ID=Thaps267952.2;Parent=Thaps267952;constitutive=1;rank=2 chr1 . CDS 564444 565895 . - 0 ID=Thaps267952;Parent=Thaps267952;rank=1 chr1 . exon 564444 565895 . - . ID=Thaps267952.1;Parent=Thaps267952;constitutive=1;rank=1 chr1 . repeat_region 573297 573316 . ? . description=trf chr1 ensembl protein_coding_gene 569444 571468 . + . ID=Thaps1069;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPW3];external_name=Thaps1069;logic_name=jgi_thaps3 chr1 ensembl transcript 569444 571468 . + . ID=Thaps1069;Parent=Thaps1069;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 569444 571468 . + 0 ID=Thaps1069;Parent=Thaps1069;rank=1 chr1 . exon 569444 571468 . + . ID=Thaps1069.1;Parent=Thaps1069;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 574054 574833 . - . ID=Thaps1071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPW5];external_name=Thaps1071;logic_name=jgi_thaps3 chr1 ensembl transcript 574054 574833 . - . ID=Thaps1071;Parent=Thaps1071;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 574054 574833 . - 0 ID=Thaps1071;Parent=Thaps1071;rank=1 chr1 . exon 574054 574833 . - . ID=Thaps1071.1;Parent=Thaps1071;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 572500 573926 . + . ID=Thaps20649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPW4];external_name=Thaps20649;logic_name=jgi_thaps3 chr1 ensembl transcript 572500 573926 . + . ID=Thaps20649;Parent=Thaps20649;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 572500 572896 . + 0 ID=Thaps20649;Parent=Thaps20649;rank=1 chr1 . exon 572500 572896 . + . ID=Thaps20649.1;Parent=Thaps20649;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 572995 573926 . + 0 ID=Thaps20649;Parent=Thaps20649;rank=2 chr1 . exon 572995 573926 . + . ID=Thaps20649.2;Parent=Thaps20649;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 576430 578366 . + . ID=Thaps26553;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BPW6];external_name=Thaps26553;logic_name=jgi_thaps3 chr1 ensembl transcript 576430 578366 . + . ID=Thaps26553;Parent=Thaps26553;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 576430 577113 . + 0 ID=Thaps26553;Parent=Thaps26553;rank=1 chr1 . exon 576430 577113 . + . ID=Thaps26553.1;Parent=Thaps26553;constitutive=1;rank=1 chr1 . CDS 577199 577490 . + 0 ID=Thaps26553;Parent=Thaps26553;rank=2 chr1 . exon 577199 577490 . + . ID=Thaps26553.2;Parent=Thaps26553;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 577569 577721 . + 0 ID=Thaps26553;Parent=Thaps26553;rank=3 chr1 . exon 577569 577721 . + . ID=Thaps26553.3;Parent=Thaps26553;constitutive=1;rank=3 chr1 . CDS 577806 577947 . + 0 ID=Thaps26553;Parent=Thaps26553;rank=4 chr1 . exon 577806 577947 . + . ID=Thaps26553.4;Parent=Thaps26553;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 578033 578366 . + 0 ID=Thaps26553;Parent=Thaps26553;rank=5 chr1 . exon 578033 578366 . + . ID=Thaps26553.5;Parent=Thaps26553;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . repeat_region 578605 578612 . ? . description=dust chr1 . repeat_region 584446 584499 . ? . description=dust chr1 . repeat_region 585930 586054 . + . description=Harbinger2N_TP chr1 . repeat_region 586246 586301 . ? . description=dust chr1 ensembl protein_coding_gene 586830 594138 . + . ID=Thaps1075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPW8];external_name=Thaps1075;logic_name=jgi_thaps3 chr1 ensembl transcript 586830 594138 . + . ID=Thaps1075;Parent=Thaps1075;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 586830 589318 . + 0 ID=Thaps1075;Parent=Thaps1075;rank=1 chr1 . exon 586830 589318 . + . ID=Thaps1075.1;Parent=Thaps1075;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 589435 589585 . + 0 ID=Thaps1075;Parent=Thaps1075;rank=2 chr1 . CDS 589643 593284 . + 0 ID=Thaps1075;Parent=Thaps1075;rank=3 chr1 . CDS 593529 593987 . + 0 ID=Thaps1075;Parent=Thaps1075;rank=4 chr1 . CDS 594100 594138 . + 0 ID=Thaps1075;Parent=Thaps1075;rank=5 chr1 ensembl protein_coding_gene 578909 580936 . + . ID=Thaps20651;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPW7];external_name=Thaps20651;logic_name=jgi_thaps3 chr1 ensembl transcript 578909 580936 . + . ID=Thaps20651;Parent=Thaps20651;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 578909 579584 . + 0 ID=Thaps20651;Parent=Thaps20651;rank=1 chr1 . exon 578909 579584 . + . ID=Thaps20651.1;Parent=Thaps20651;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 579672 579932 . + 0 ID=Thaps20651;Parent=Thaps20651;rank=2 chr1 . exon 579672 579932 . + . ID=Thaps20651.2;Parent=Thaps20651;constitutive=1;rank=2 chr1 . CDS 580032 580936 . + 0 ID=Thaps20651;Parent=Thaps20651;rank=3 chr1 . exon 580032 580936 . + . ID=Thaps20651.3;Parent=Thaps20651;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl gene 581156 581609 . - . ID=Thaps260808;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 581156 581609 . - . ID=Thaps260808;Parent=Thaps260808;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 581156 581287 . - . ID=Thaps260808.2;Parent=Thaps260808;constitutive=1;rank=2 chr1 . exon 581310 581609 . - . ID=Thaps260808.1;Parent=Thaps260808;constitutive=1;rank=1 chr1 . exon 589435 589585 . + . ID=Thaps1075.2;Parent=Thaps1075;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 589643 593284 . + . ID=Thaps1075.3;Parent=Thaps1075;constitutive=1;rank=3 chr1 . exon 593529 593987 . + . ID=Thaps1075.4;Parent=Thaps1075;constitutive=1;rank=4 chr1 . exon 594100 594138 . + . ID=Thaps1075.5;Parent=Thaps1075;constitutive=1;rank=5 chr1 ensembl protein_coding_gene 595068 598022 . + . ID=Thaps20653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPW9];external_name=Thaps20653;logic_name=jgi_thaps3 chr1 ensembl transcript 595068 598022 . + . ID=Thaps20653;Parent=Thaps20653;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 595068 597348 . + 0 ID=Thaps20653;Parent=Thaps20653;rank=1 chr1 . exon 595068 597348 . + . ID=Thaps20653.1;Parent=Thaps20653;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 597496 597620 . + 0 ID=Thaps20653;Parent=Thaps20653;rank=2 chr1 . exon 597496 597620 . + . ID=Thaps20653.2;Parent=Thaps20653;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 597693 598022 . + 0 ID=Thaps20653;Parent=Thaps20653;rank=3 chr1 . exon 597693 598022 . + . ID=Thaps20653.3;Parent=Thaps20653;constitutive=1;rank=3 chr1 . repeat_region 600001 600023 . ? . description=trf chr1 . repeat_region 603719 603736 . ? . description=dust chr1 ensembl protein_coding_gene 600122 600925 . + . ID=Thaps1077;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPX0];external_name=Thaps1077;logic_name=jgi_thaps3 chr1 ensembl transcript 600122 600925 . + . ID=Thaps1077;Parent=Thaps1077;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 600122 600925 . + 0 ID=Thaps1077;Parent=Thaps1077;rank=1 chr1 . exon 600122 600925 . + . ID=Thaps1077.1;Parent=Thaps1077;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 603773 606844 . + . ID=Thaps1079;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPX2];external_name=Thaps1079;logic_name=jgi_thaps3 chr1 ensembl transcript 603773 606844 . + . ID=Thaps1079;Parent=Thaps1079;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 603773 604081 . + 0 ID=Thaps1079;Parent=Thaps1079;rank=1 chr1 . exon 603773 604081 . + . ID=Thaps1079.1;Parent=Thaps1079;constitutive=1;rank=1 chr1 . CDS 604187 606844 . + 0 ID=Thaps1079;Parent=Thaps1079;rank=2 chr1 . exon 604187 606844 . + . ID=Thaps1079.2;Parent=Thaps1079;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 606964 613532 . - . ID=Thaps1080;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPX3];external_name=Thaps1080;logic_name=jgi_thaps3 chr1 ensembl transcript 606964 613532 . - . ID=Thaps1080;Parent=Thaps1080;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 606964 606993 . - 0 ID=Thaps1080;Parent=Thaps1080;rank=7 chr1 . exon 606964 606993 . - . ID=Thaps1080.7;Parent=Thaps1080;constitutive=1;rank=7 chr1 . CDS 607035 608981 . - 0 ID=Thaps1080;Parent=Thaps1080;rank=6 chr1 . exon 607035 608981 . - . ID=Thaps1080.6;Parent=Thaps1080;constitutive=1;rank=6 chr1 . CDS 609063 610083 . - 0 ID=Thaps1080;Parent=Thaps1080;rank=5 chr1 . CDS 610178 610282 . - 0 ID=Thaps1080;Parent=Thaps1080;rank=4 chr1 . CDS 610369 610682 . - 0 ID=Thaps1080;Parent=Thaps1080;rank=3 chr1 . CDS 611036 612686 . - 0 ID=Thaps1080;Parent=Thaps1080;rank=2 chr1 . CDS 612787 613532 . - 0 ID=Thaps1080;Parent=Thaps1080;rank=1 chr1 ensembl protein_coding_gene 601186 603548 . + . ID=Thaps20654;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPX1];external_name=Thaps20654;logic_name=jgi_thaps3 chr1 ensembl transcript 601186 603548 . + . ID=Thaps20654;Parent=Thaps20654;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 601186 602679 . + 0 ID=Thaps20654;Parent=Thaps20654;rank=1 chr1 . exon 601186 602679 . + . ID=Thaps20654.1;Parent=Thaps20654;constitutive=1;rank=1 chr1 . CDS 602751 602874 . + 0 ID=Thaps20654;Parent=Thaps20654;rank=2 chr1 . exon 602751 602874 . + . ID=Thaps20654.2;Parent=Thaps20654;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 602926 603406 . + 0 ID=Thaps20654;Parent=Thaps20654;rank=3 chr1 . exon 602926 603406 . + . ID=Thaps20654.3;Parent=Thaps20654;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 603506 603548 . + 0 ID=Thaps20654;Parent=Thaps20654;rank=4 chr1 . exon 603506 603548 . + . ID=Thaps20654.4;Parent=Thaps20654;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . exon 609063 610083 . - . ID=Thaps1080.5;Parent=Thaps1080;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . exon 610178 610282 . - . ID=Thaps1080.4;Parent=Thaps1080;constitutive=1;rank=4 chr1 . exon 610369 610682 . - . ID=Thaps1080.3;Parent=Thaps1080;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 611036 612686 . - . ID=Thaps1080.2;Parent=Thaps1080;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 612787 613532 . - . ID=Thaps1080.1;Parent=Thaps1080;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 614564 616747 . + . ID=Thaps1081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPX4];external_name=Thaps1081;logic_name=jgi_thaps3 chr1 ensembl transcript 614564 616747 . + . ID=Thaps1081;Parent=Thaps1081;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 614564 614588 . + 0 ID=Thaps1081;Parent=Thaps1081;rank=1 chr1 . exon 614564 614588 . + . ID=Thaps1081.1;Parent=Thaps1081;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 614647 615679 . + 0 ID=Thaps1081;Parent=Thaps1081;rank=2 chr1 . exon 614647 615679 . + . ID=Thaps1081.2;Parent=Thaps1081;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 615775 615946 . + 0 ID=Thaps1081;Parent=Thaps1081;rank=3 chr1 . exon 615775 615946 . + . ID=Thaps1081.3;Parent=Thaps1081;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 616019 616747 . + 0 ID=Thaps1081;Parent=Thaps1081;rank=4 chr1 . exon 616019 616747 . + . ID=Thaps1081.4;Parent=Thaps1081;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 617318 618492 . - . ID=Thaps1082;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPX5];external_name=Thaps1082;logic_name=jgi_thaps3 chr1 ensembl transcript 617318 618492 . - . ID=Thaps1082;Parent=Thaps1082;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 617318 617719 . - 0 ID=Thaps1082;Parent=Thaps1082;rank=2 chr1 . exon 617318 617719 . - . ID=Thaps1082.2;Parent=Thaps1082;constitutive=1;rank=2 chr1 . CDS 617812 618492 . - 0 ID=Thaps1082;Parent=Thaps1082;rank=1 chr1 . exon 617812 618492 . - . ID=Thaps1082.1;Parent=Thaps1082;constitutive=1;rank=1 chr1 . repeat_region 618738 618748 . ? . description=dust chr1 . repeat_region 620639 620692 . ? . description=trf chr1 . repeat_region 621938 621975 . ? . description=trf chr1 . repeat_region 625190 625198 . ? . description=dust chr1 ensembl protein_coding_gene 618789 620578 . - . ID=Thaps1083;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPX6];external_name=Thaps1083;logic_name=jgi_thaps3 chr1 ensembl transcript 618789 620578 . - . ID=Thaps1083;Parent=Thaps1083;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 618789 620090 . - 0 ID=Thaps1083;Parent=Thaps1083;rank=3 chr1 . exon 618789 620090 . - . ID=Thaps1083.3;Parent=Thaps1083;constitutive=1;rank=3 chr1 . CDS 620190 620268 . - 0 ID=Thaps1083;Parent=Thaps1083;rank=2 chr1 . exon 620190 620268 . - . ID=Thaps1083.2;Parent=Thaps1083;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 620406 620578 . - 0 ID=Thaps1083;Parent=Thaps1083;rank=1 chr1 . exon 620406 620578 . - . ID=Thaps1083.1;Parent=Thaps1083;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 625286 626422 . - . ID=Thaps1086;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPX8];external_name=Thaps1086;logic_name=jgi_thaps3 chr1 ensembl transcript 625286 626422 . - . ID=Thaps1086;Parent=Thaps1086;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 625286 626422 . - 0 ID=Thaps1086;Parent=Thaps1086;rank=1 chr1 . exon 625286 626422 . - . ID=Thaps1086.1;Parent=Thaps1086;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 622976 625039 . - . ID=Thaps20656;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPX7];external_name=Thaps20656;logic_name=jgi_thaps3 chr1 ensembl transcript 622976 625039 . - . ID=Thaps20656;Parent=Thaps20656;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 622976 624330 . - 0 ID=Thaps20656;Parent=Thaps20656;rank=3 chr1 . exon 622976 624330 . - . ID=Thaps20656.3;Parent=Thaps20656;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 624425 624690 . - 0 ID=Thaps20656;Parent=Thaps20656;rank=2 chr1 . exon 624425 624690 . - . ID=Thaps20656.2;Parent=Thaps20656;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 624816 625039 . - 0 ID=Thaps20656;Parent=Thaps20656;rank=1 chr1 . exon 624816 625039 . - . ID=Thaps20656.1;Parent=Thaps20656;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 636319 637020 . - . ID=Thaps1088;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY0];external_name=Thaps1088;logic_name=jgi_thaps3 chr1 ensembl transcript 636319 637020 . - . ID=Thaps1088;Parent=Thaps1088;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 636319 637020 . - 0 ID=Thaps1088;Parent=Thaps1088;rank=1 chr1 . exon 636319 637020 . - . ID=Thaps1088.1;Parent=Thaps1088;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 638329 639750 . - . ID=Thaps20658;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY1];external_name=Thaps20658;logic_name=jgi_thaps3 chr1 ensembl transcript 638329 639750 . - . ID=Thaps20658;Parent=Thaps20658;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 638329 639750 . - 0 ID=Thaps20658;Parent=Thaps20658;rank=1 chr1 . exon 638329 639750 . - . ID=Thaps20658.1;Parent=Thaps20658;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 629224 633414 . + . ID=Thaps267957;biotype=protein_coding;description=Translation elongation factor ef-1 alpha [Source:UniProtKB/TrEMBL%3BAcc:B8BPX9];external_name=Thaps267957;logic_name=jgi_thaps3 chr1 ensembl transcript 629224 633414 . + . ID=Thaps267957;Parent=Thaps267957;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 629224 629696 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=1 chr1 . exon 629224 629696 . + . ID=Thaps267957.1;Parent=Thaps267957;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 629796 629855 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=2 chr1 . exon 629796 629855 . + . ID=Thaps267957.2;Parent=Thaps267957;constitutive=1;rank=2 chr1 . CDS 629919 630032 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=3 chr1 . exon 629919 630032 . + . ID=Thaps267957.3;Parent=Thaps267957;constitutive=1;rank=3 chr1 . CDS 630083 630166 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=4 chr1 . exon 630083 630166 . + . ID=Thaps267957.4;Parent=Thaps267957;constitutive=1;rank=4 chr1 . CDS 630242 630663 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=5 chr1 . exon 630242 630663 . + . ID=Thaps267957.5;Parent=Thaps267957;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 630748 631433 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=6 chr1 . exon 630748 631433 . + . ID=Thaps267957.6;Parent=Thaps267957;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 631869 632206 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=7 chr1 . exon 631869 632206 . + . ID=Thaps267957.7;Parent=Thaps267957;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 632261 632460 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=8 chr1 . exon 632261 632460 . + . ID=Thaps267957.8;Parent=Thaps267957;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . CDS 632485 632576 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=9 chr1 . exon 632485 632576 . + . ID=Thaps267957.9;Parent=Thaps267957;constitutive=1;ensembl_end_phase=2;rank=9 chr1 . CDS 632677 632783 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=10 chr1 . exon 632677 632783 . + . ID=Thaps267957.10;Parent=Thaps267957;constitutive=1;ensembl_end_phase=2;rank=10 chr1 . CDS 632805 632998 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=11 chr1 . exon 632805 632998 . + . ID=Thaps267957.11;Parent=Thaps267957;constitutive=1;ensembl_end_phase=2;rank=11 chr1 . CDS 633020 633414 . + 0 ID=Thaps267957;Parent=Thaps267957;rank=12 chr1 . exon 633020 633414 . + . ID=Thaps267957.12;Parent=Thaps267957;constitutive=1;ensembl_end_phase=2;rank=12 chr1 . repeat_region 639750 639774 . ? . description=dust chr1 . repeat_region 645498 645506 . ? . description=dust chr1 ensembl protein_coding_gene 643177 644307 . + . ID=Thaps1091;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY4];external_name=Thaps1091;logic_name=jgi_thaps3 chr1 ensembl transcript 643177 644307 . + . ID=Thaps1091;Parent=Thaps1091;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 643177 644307 . + 0 ID=Thaps1091;Parent=Thaps1091;rank=1 chr1 . exon 643177 644307 . + . ID=Thaps1091.1;Parent=Thaps1091;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 645576 648957 . + . ID=Thaps1093;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY6];external_name=Thaps1093;logic_name=jgi_thaps3 chr1 ensembl transcript 645576 648957 . + . ID=Thaps1093;Parent=Thaps1093;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 645576 646660 . + 0 ID=Thaps1093;Parent=Thaps1093;rank=1 chr1 . exon 645576 646660 . + . ID=Thaps1093.1;Parent=Thaps1093;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 647380 648024 . + 0 ID=Thaps1093;Parent=Thaps1093;rank=2 chr1 . exon 647380 648024 . + . ID=Thaps1093.2;Parent=Thaps1093;constitutive=1;rank=2 chr1 . CDS 648135 648957 . + 0 ID=Thaps1093;Parent=Thaps1093;rank=3 chr1 . exon 648135 648957 . + . ID=Thaps1093.3;Parent=Thaps1093;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 640178 641567 . + . ID=Thaps20659;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY2];external_name=Thaps20659;logic_name=jgi_thaps3 chr1 ensembl transcript 640178 641567 . + . ID=Thaps20659;Parent=Thaps20659;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 640178 640314 . + 0 ID=Thaps20659;Parent=Thaps20659;rank=1 chr1 . exon 640178 640314 . + . ID=Thaps20659.1;Parent=Thaps20659;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 640474 641276 . + 0 ID=Thaps20659;Parent=Thaps20659;rank=2 chr1 . exon 640474 641276 . + . ID=Thaps20659.2;Parent=Thaps20659;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 641347 641567 . + 0 ID=Thaps20659;Parent=Thaps20659;rank=3 chr1 . exon 641347 641567 . + . ID=Thaps20659.3;Parent=Thaps20659;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 642184 642632 . - . ID=Thaps260812;biotype=protein_coding;description=Lysophosphatidic acid acyltransferase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY3];external_name=Thaps260812;logic_name=jgi_thaps3 chr1 ensembl transcript 642184 642632 . - . ID=Thaps260812;Parent=Thaps260812;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 642184 642632 . - 0 ID=Thaps260812;Parent=Thaps260812;rank=1 chr1 . exon 642184 642632 . - . ID=Thaps260812.1;Parent=Thaps260812;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 644417 645181 . - . ID=Thaps39003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY5];external_name=Thaps39003;logic_name=jgi_thaps3 chr1 ensembl transcript 644417 645181 . - . ID=Thaps39003;Parent=Thaps39003;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 644417 644680 . - 0 ID=Thaps39003;Parent=Thaps39003;rank=3 chr1 . exon 644417 644680 . - . ID=Thaps39003.3;Parent=Thaps39003;constitutive=1;rank=3 chr1 . CDS 644797 644955 . - 0 ID=Thaps39003;Parent=Thaps39003;rank=2 chr1 . exon 644797 644955 . - . ID=Thaps39003.2;Parent=Thaps39003;constitutive=1;rank=2 chr1 . CDS 645059 645181 . - 0 ID=Thaps39003;Parent=Thaps39003;rank=1 chr1 . exon 645059 645181 . - . ID=Thaps39003.1;Parent=Thaps39003;constitutive=1;rank=1 chr1 . repeat_region 652437 652461 . ? . description=trf chr1 . repeat_region 657683 657709 . ? . description=trf chr1 . repeat_region 658323 658343 . ? . description=trf chr1 ensembl protein_coding_gene 650312 651207 . - . ID=Thaps1094;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY7];external_name=Thaps1094;logic_name=jgi_thaps3 chr1 ensembl transcript 650312 651207 . - . ID=Thaps1094;Parent=Thaps1094;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 650312 650562 . - 0 ID=Thaps1094;Parent=Thaps1094;rank=3 chr1 . exon 650312 650562 . - . ID=Thaps1094.3;Parent=Thaps1094;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 650697 650849 . - 0 ID=Thaps1094;Parent=Thaps1094;rank=2 chr1 . exon 650697 650849 . - . ID=Thaps1094.2;Parent=Thaps1094;constitutive=1;rank=2 chr1 . CDS 650946 651207 . - 0 ID=Thaps1094;Parent=Thaps1094;rank=1 chr1 . exon 650946 651207 . - . ID=Thaps1094.1;Parent=Thaps1094;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 651869 652627 . + . ID=Thaps1095;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY8];external_name=Thaps1095;logic_name=jgi_thaps3 chr1 ensembl transcript 651869 652627 . + . ID=Thaps1095;Parent=Thaps1095;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 651869 651956 . + 0 ID=Thaps1095;Parent=Thaps1095;rank=1 chr1 . exon 651869 651956 . + . ID=Thaps1095.1;Parent=Thaps1095;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 652047 652307 . + 0 ID=Thaps1095;Parent=Thaps1095;rank=2 chr1 . exon 652047 652307 . + . ID=Thaps1095.2;Parent=Thaps1095;constitutive=1;rank=2 chr1 . CDS 652467 652627 . + 0 ID=Thaps1095;Parent=Thaps1095;rank=3 chr1 . exon 652467 652627 . + . ID=Thaps1095.3;Parent=Thaps1095;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 652924 655761 . + . ID=Thaps20661;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPY9];external_name=Thaps20661;logic_name=jgi_thaps3 chr1 ensembl transcript 652924 655761 . + . ID=Thaps20661;Parent=Thaps20661;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 652924 655761 . + 0 ID=Thaps20661;Parent=Thaps20661;rank=1 chr1 . exon 652924 655761 . + . ID=Thaps20661.1;Parent=Thaps20661;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 655883 658018 . - . ID=Thaps20662;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ0];external_name=Thaps20662;logic_name=jgi_thaps3 chr1 ensembl transcript 655883 658018 . - . ID=Thaps20662;Parent=Thaps20662;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 655883 658018 . - 0 ID=Thaps20662;Parent=Thaps20662;rank=1 chr1 . exon 655883 658018 . - . ID=Thaps20662.1;Parent=Thaps20662;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 664602 666749 . - . ID=Thaps1101;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ4];external_name=Thaps1101;logic_name=jgi_thaps3 chr1 ensembl transcript 664602 666749 . - . ID=Thaps1101;Parent=Thaps1101;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 664602 666749 . - 0 ID=Thaps1101;Parent=Thaps1101;rank=1 chr1 . exon 664602 666749 . - . ID=Thaps1101.1;Parent=Thaps1101;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 666943 668282 . + . ID=Thaps1102;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ5];external_name=Thaps1102;logic_name=jgi_thaps3 chr1 ensembl transcript 666943 668282 . + . ID=Thaps1102;Parent=Thaps1102;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 666943 667366 . + 0 ID=Thaps1102;Parent=Thaps1102;rank=1 chr1 . exon 666943 667366 . + . ID=Thaps1102.1;Parent=Thaps1102;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 667606 668282 . + 0 ID=Thaps1102;Parent=Thaps1102;rank=2 chr1 . exon 667606 668282 . + . ID=Thaps1102.2;Parent=Thaps1102;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 658469 660202 . + . ID=Thaps20663;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ1];external_name=Thaps20663;logic_name=jgi_thaps3 chr1 ensembl transcript 658469 660202 . + . ID=Thaps20663;Parent=Thaps20663;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 658469 660202 . + 0 ID=Thaps20663;Parent=Thaps20663;rank=1 chr1 . exon 658469 660202 . + . ID=Thaps20663.1;Parent=Thaps20663;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 660483 661871 . - . ID=Thaps20664;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ2];external_name=Thaps20664;logic_name=jgi_thaps3 chr1 ensembl transcript 660483 661871 . - . ID=Thaps20664;Parent=Thaps20664;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 660483 661871 . - 0 ID=Thaps20664;Parent=Thaps20664;rank=1 chr1 . exon 660483 661871 . - . ID=Thaps20664.1;Parent=Thaps20664;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 663022 664418 . + . ID=Thaps20665;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ3];external_name=Thaps20665;logic_name=jgi_thaps3 chr1 ensembl transcript 663022 664418 . + . ID=Thaps20665;Parent=Thaps20665;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 663022 663075 . + 0 ID=Thaps20665;Parent=Thaps20665;rank=1 chr1 . exon 663022 663075 . + . ID=Thaps20665.1;Parent=Thaps20665;constitutive=1;rank=1 chr1 . CDS 663100 663157 . + 0 ID=Thaps20665;Parent=Thaps20665;rank=2 chr1 . exon 663100 663157 . + . ID=Thaps20665.2;Parent=Thaps20665;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 663290 664191 . + 0 ID=Thaps20665;Parent=Thaps20665;rank=3 chr1 . exon 663290 664191 . + . ID=Thaps20665.3;Parent=Thaps20665;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 664371 664418 . + 0 ID=Thaps20665;Parent=Thaps20665;rank=4 chr1 . exon 664371 664418 . + . ID=Thaps20665.4;Parent=Thaps20665;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 668461 676626 . - . ID=Thaps20666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ6];external_name=Thaps20666;logic_name=jgi_thaps3 chr1 ensembl transcript 668461 676626 . - . ID=Thaps20666;Parent=Thaps20666;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 668461 668512 . - 0 ID=Thaps20666;Parent=Thaps20666;rank=4 chr1 . exon 668461 668512 . - . ID=Thaps20666.4;Parent=Thaps20666;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 668533 673397 . - 0 ID=Thaps20666;Parent=Thaps20666;rank=3 chr1 . exon 668533 673397 . - . ID=Thaps20666.3;Parent=Thaps20666;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 673667 674871 . - 0 ID=Thaps20666;Parent=Thaps20666;rank=2 chr1 . exon 673667 674871 . - . ID=Thaps20666.2;Parent=Thaps20666;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 675258 676626 . - 0 ID=Thaps20666;Parent=Thaps20666;rank=1 chr1 . exon 675258 676626 . - . ID=Thaps20666.1;Parent=Thaps20666;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 678503 678510 . ? . description=dust chr1 . repeat_region 681822 681846 . ? . description=dust chr1 . repeat_region 685152 685162 . ? . description=dust chr1 ensembl protein_coding_gene 685281 687291 . + . ID=Thaps20670;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ9];external_name=Thaps20670;logic_name=jgi_thaps3 chr1 ensembl transcript 685281 687291 . + . ID=Thaps20670;Parent=Thaps20670;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 685281 686059 . + 0 ID=Thaps20670;Parent=Thaps20670;rank=1 chr1 . exon 685281 686059 . + . ID=Thaps20670.1;Parent=Thaps20670;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 686139 687291 . + 0 ID=Thaps20670;Parent=Thaps20670;rank=2 chr1 . exon 686139 687291 . + . ID=Thaps20670.2;Parent=Thaps20670;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 687832 690088 . + . ID=Thaps20671;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ00];external_name=Thaps20671;logic_name=jgi_thaps3 chr1 ensembl transcript 687832 690088 . + . ID=Thaps20671;Parent=Thaps20671;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 687832 688234 . + 0 ID=Thaps20671;Parent=Thaps20671;rank=1 chr1 . exon 687832 688234 . + . ID=Thaps20671.1;Parent=Thaps20671;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 688337 688696 . + 0 ID=Thaps20671;Parent=Thaps20671;rank=2 chr1 . exon 688337 688696 . + . ID=Thaps20671.2;Parent=Thaps20671;constitutive=1;rank=2 chr1 . CDS 688784 689379 . + 0 ID=Thaps20671;Parent=Thaps20671;rank=3 chr1 . CDS 689486 690088 . + 0 ID=Thaps20671;Parent=Thaps20671;rank=4 chr1 ensembl protein_coding_gene 681891 683306 . + . ID=Thaps26560;biotype=protein_coding;description=Histidinol-phosphate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ8];external_name=Thaps26560;logic_name=jgi_thaps3 chr1 ensembl transcript 681891 683306 . + . ID=Thaps26560;Parent=Thaps26560;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 681891 682382 . + 0 ID=Thaps26560;Parent=Thaps26560;rank=1 chr1 . exon 681891 682382 . + . ID=Thaps26560.1;Parent=Thaps26560;constitutive=1;rank=1 chr1 . CDS 682538 683059 . + 0 ID=Thaps26560;Parent=Thaps26560;rank=2 chr1 . exon 682538 683059 . + . ID=Thaps26560.2;Parent=Thaps26560;constitutive=1;rank=2 chr1 . CDS 683163 683306 . + 0 ID=Thaps26560;Parent=Thaps26560;rank=3 chr1 . exon 683163 683306 . + . ID=Thaps26560.3;Parent=Thaps26560;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 679381 680900 . - . ID=Thaps267958;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BPZ7];external_name=Thaps267958;logic_name=jgi_thaps3 chr1 ensembl transcript 679381 680900 . - . ID=Thaps267958;Parent=Thaps267958;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 679381 680722 . - 0 ID=Thaps267958;Parent=Thaps267958;rank=2 chr1 . exon 679381 680722 . - . ID=Thaps267958.2;Parent=Thaps267958;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 680812 680900 . - 0 ID=Thaps267958;Parent=Thaps267958;rank=1 chr1 . exon 680812 680900 . - . ID=Thaps267958.1;Parent=Thaps267958;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 691096 691125 . ? . description=trf chr1 . repeat_region 697658 697848 . ? . description=trf chr1 . repeat_region 697757 697865 . ? . description=trf chr1 . repeat_region 698201 698304 . ? . description=trf chr1 ensembl protein_coding_gene 690288 691954 . - . ID=Thaps1109;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ01];external_name=Thaps1109;logic_name=jgi_thaps3 chr1 ensembl transcript 690288 691954 . - . ID=Thaps1109;Parent=Thaps1109;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 690288 690356 . - 0 ID=Thaps1109;Parent=Thaps1109;rank=6 chr1 . exon 690288 690356 . - . ID=Thaps1109.6;Parent=Thaps1109;constitutive=1;rank=6 chr1 . CDS 690511 690923 . - 0 ID=Thaps1109;Parent=Thaps1109;rank=5 chr1 . exon 690511 690923 . - . ID=Thaps1109.5;Parent=Thaps1109;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 691050 691353 . - 0 ID=Thaps1109;Parent=Thaps1109;rank=4 chr1 . exon 691050 691353 . - . ID=Thaps1109.4;Parent=Thaps1109;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 691400 691505 . - 0 ID=Thaps1109;Parent=Thaps1109;rank=3 chr1 . exon 691400 691505 . - . ID=Thaps1109.3;Parent=Thaps1109;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 691555 691748 . - 0 ID=Thaps1109;Parent=Thaps1109;rank=2 chr1 . exon 691555 691748 . - . ID=Thaps1109.2;Parent=Thaps1109;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 691802 691954 . - 0 ID=Thaps1109;Parent=Thaps1109;rank=1 chr1 . exon 691802 691954 . - . ID=Thaps1109.1;Parent=Thaps1109;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 692424 697888 . + . ID=Thaps168;biotype=protein_coding;description=DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8BQ02];external_name=RPB1;logic_name=jgi_thaps3 chr1 ensembl transcript 692424 697888 . + . ID=Thaps168;Parent=Thaps168;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 692424 692636 . + 0 ID=Thaps168;Parent=Thaps168;rank=1 chr1 . exon 692424 692636 . + . ID=Thaps168.1;Parent=Thaps168;constitutive=1;rank=1 chr1 . CDS 692868 693124 . + 0 ID=Thaps168;Parent=Thaps168;rank=2 chr1 . exon 692868 693124 . + . ID=Thaps168.2;Parent=Thaps168;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 693220 693393 . + 0 ID=Thaps168;Parent=Thaps168;rank=3 chr1 . exon 693220 693393 . + . ID=Thaps168.3;Parent=Thaps168;constitutive=1;rank=3 chr1 . CDS 693484 697291 . + 0 ID=Thaps168;Parent=Thaps168;rank=4 chr1 . exon 693484 697291 . + . ID=Thaps168.4;Parent=Thaps168;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 697311 697403 . + 0 ID=Thaps168;Parent=Thaps168;rank=5 chr1 . exon 697311 697403 . + . ID=Thaps168.5;Parent=Thaps168;constitutive=1;rank=5 chr1 . CDS 697425 697485 . + 0 ID=Thaps168;Parent=Thaps168;rank=6 chr1 . exon 697425 697485 . + . ID=Thaps168.6;Parent=Thaps168;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 697519 697535 . + 0 ID=Thaps168;Parent=Thaps168;rank=7 chr1 . exon 697519 697535 . + . ID=Thaps168.7;Parent=Thaps168;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 697558 697668 . + 0 ID=Thaps168;Parent=Thaps168;rank=8 chr1 . exon 697558 697668 . + . ID=Thaps168.8;Parent=Thaps168;constitutive=1;rank=8 chr1 . CDS 697705 697775 . + 0 ID=Thaps168;Parent=Thaps168;rank=9 chr1 . exon 697705 697775 . + . ID=Thaps168.9;Parent=Thaps168;constitutive=1;ensembl_end_phase=2;rank=9 chr1 . CDS 697810 697888 . + 0 ID=Thaps168;Parent=Thaps168;rank=10 chr1 . exon 697810 697888 . + . ID=Thaps168.10;Parent=Thaps168;constitutive=1;ensembl_end_phase=1;rank=10 chr1 . exon 688784 689379 . + . ID=Thaps20671.3;Parent=Thaps20671;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 689486 690088 . + . ID=Thaps20671.4;Parent=Thaps20671;constitutive=1;rank=4 chr1 . repeat_region 700286 700465 . - . description=TE2b_TP chr1 . repeat_region 701379 701386 . ? . description=dust chr1 ensembl tRNA_gene 701410 701482 . - . ID=EPrTPOG00000000013;biotype=tRNA;description=tRNA-Lys for anticodon UUU [Source:TRNASCAN_SE%3BAcc:tRNA-Lys];external_name=tRNA-Lys;logic_name=ncrna_eg chr1 ensembl transcript 701410 701482 . - . ID=EPrTPOT00000000003;Parent=EPrTPOG00000000013;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 701410 701482 . - . ID=EPrTPOE00000000013;Parent=EPrTPOT00000000003;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 699080 700124 . - . ID=Thaps1111;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ03];external_name=Thaps1111;logic_name=jgi_thaps3 chr1 ensembl transcript 699080 700124 . - . ID=Thaps1111;Parent=Thaps1111;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 699080 699575 . - 0 ID=Thaps1111;Parent=Thaps1111;rank=2 chr1 . exon 699080 699575 . - . ID=Thaps1111.2;Parent=Thaps1111;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 699745 700124 . - 0 ID=Thaps1111;Parent=Thaps1111;rank=1 chr1 . exon 699745 700124 . - . ID=Thaps1111.1;Parent=Thaps1111;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 701706 704618 . - . ID=Thaps20673;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ04];external_name=Thaps20673;logic_name=jgi_thaps3 chr1 ensembl transcript 701706 704618 . - . ID=Thaps20673;Parent=Thaps20673;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 701706 702148 . - 0 ID=Thaps20673;Parent=Thaps20673;rank=5 chr1 . exon 701706 702148 . - . ID=Thaps20673.5;Parent=Thaps20673;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 702247 702907 . - 0 ID=Thaps20673;Parent=Thaps20673;rank=4 chr1 . exon 702247 702907 . - . ID=Thaps20673.4;Parent=Thaps20673;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 702934 703068 . - 0 ID=Thaps20673;Parent=Thaps20673;rank=3 chr1 . exon 702934 703068 . - . ID=Thaps20673.3;Parent=Thaps20673;constitutive=1;rank=3 chr1 . CDS 703106 703334 . - 0 ID=Thaps20673;Parent=Thaps20673;rank=2 chr1 . exon 703106 703334 . - . ID=Thaps20673.2;Parent=Thaps20673;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 703363 704618 . - 0 ID=Thaps20673;Parent=Thaps20673;rank=1 chr1 . exon 703363 704618 . - . ID=Thaps20673.1;Parent=Thaps20673;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 707184 708884 . - . ID=Thaps20674;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ06];external_name=Thaps20674;logic_name=jgi_thaps3 chr1 ensembl transcript 707184 708884 . - . ID=Thaps20674;Parent=Thaps20674;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 707184 708884 . - 0 ID=Thaps20674;Parent=Thaps20674;rank=1 chr1 . exon 707184 708884 . - . ID=Thaps20674.1;Parent=Thaps20674;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 705635 707089 . + . ID=Thaps260816;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ05];external_name=Thaps260816;logic_name=jgi_thaps3 chr1 ensembl transcript 705635 707089 . + . ID=Thaps260816;Parent=Thaps260816;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 705635 705991 . + 0 ID=Thaps260816;Parent=Thaps260816;rank=1 chr1 . exon 705635 705991 . + . ID=Thaps260816.1;Parent=Thaps260816;constitutive=1;rank=1 chr1 . CDS 706031 706268 . + 0 ID=Thaps260816;Parent=Thaps260816;rank=2 chr1 . exon 706031 706268 . + . ID=Thaps260816.2;Parent=Thaps260816;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 706383 706648 . + 0 ID=Thaps260816;Parent=Thaps260816;rank=3 chr1 . exon 706383 706648 . + . ID=Thaps260816.3;Parent=Thaps260816;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 706737 707089 . + 0 ID=Thaps260816;Parent=Thaps260816;rank=4 chr1 . exon 706737 707089 . + . ID=Thaps260816.4;Parent=Thaps260816;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . repeat_region 709531 709559 . ? . description=trf chr1 . repeat_region 717311 717463 . + . description=Copia9LTR_TP chr1 ensembl protein_coding_gene 711383 712061 . - . ID=Thaps1116;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ08];external_name=Thaps1116;logic_name=jgi_thaps3 chr1 ensembl transcript 711383 712061 . - . ID=Thaps1116;Parent=Thaps1116;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 711383 711430 . - 0 ID=Thaps1116;Parent=Thaps1116;rank=3 chr1 . exon 711383 711430 . - . ID=Thaps1116.3;Parent=Thaps1116;constitutive=1;rank=3 chr1 . CDS 711534 711747 . - 0 ID=Thaps1116;Parent=Thaps1116;rank=2 chr1 . exon 711534 711747 . - . ID=Thaps1116.2;Parent=Thaps1116;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 711856 712061 . - 0 ID=Thaps1116;Parent=Thaps1116;rank=1 chr1 . exon 711856 712061 . - . ID=Thaps1116.1;Parent=Thaps1116;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 717591 718882 . + . ID=Thaps1118;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ10];external_name=Thaps1118;logic_name=jgi_thaps3 chr1 ensembl transcript 717591 718882 . + . ID=Thaps1118;Parent=Thaps1118;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 717591 718514 . + 0 ID=Thaps1118;Parent=Thaps1118;rank=1 chr1 . exon 717591 718514 . + . ID=Thaps1118.1;Parent=Thaps1118;constitutive=1;rank=1 chr1 . CDS 718604 718882 . + 0 ID=Thaps1118;Parent=Thaps1118;rank=2 chr1 ensembl protein_coding_gene 712345 716233 . + . ID=Thaps20675;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ09];external_name=Thaps20675;logic_name=jgi_thaps3 chr1 ensembl transcript 712345 716233 . + . ID=Thaps20675;Parent=Thaps20675;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 712345 712599 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=1 chr1 . exon 712345 712599 . + . ID=Thaps20675.1;Parent=Thaps20675;constitutive=1;rank=1 chr1 . CDS 712747 713720 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=2 chr1 . exon 712747 713720 . + . ID=Thaps20675.2;Parent=Thaps20675;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 713748 713857 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=3 chr1 . exon 713748 713857 . + . ID=Thaps20675.3;Parent=Thaps20675;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 713943 714126 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=4 chr1 . exon 713943 714126 . + . ID=Thaps20675.4;Parent=Thaps20675;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 714208 714482 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=5 chr1 . exon 714208 714482 . + . ID=Thaps20675.5;Parent=Thaps20675;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 714568 714624 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=6 chr1 . exon 714568 714624 . + . ID=Thaps20675.6;Parent=Thaps20675;constitutive=1;rank=6 chr1 . CDS 714711 715210 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=7 chr1 . exon 714711 715210 . + . ID=Thaps20675.7;Parent=Thaps20675;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 715359 715798 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=8 chr1 . exon 715359 715798 . + . ID=Thaps20675.8;Parent=Thaps20675;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . CDS 715873 716091 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=9 chr1 . exon 715873 716091 . + . ID=Thaps20675.9;Parent=Thaps20675;constitutive=1;rank=9 chr1 . CDS 716164 716233 . + 0 ID=Thaps20675;Parent=Thaps20675;rank=10 chr1 . exon 716164 716233 . + . ID=Thaps20675.10;Parent=Thaps20675;constitutive=1;ensembl_end_phase=1;rank=10 chr1 ensembl protein_coding_gene 709527 711037 . + . ID=Thaps31627;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ07];external_name=Thaps31627;logic_name=jgi_thaps3 chr1 ensembl transcript 709527 711037 . + . ID=Thaps31627;Parent=Thaps31627;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 709527 709694 . + 0 ID=Thaps31627;Parent=Thaps31627;rank=1 chr1 . exon 709527 709694 . + . ID=Thaps31627.1;Parent=Thaps31627;constitutive=1;rank=1 chr1 . CDS 710319 710363 . + 0 ID=Thaps31627;Parent=Thaps31627;rank=2 chr1 . exon 710319 710363 . + . ID=Thaps31627.2;Parent=Thaps31627;constitutive=1;rank=2 chr1 . CDS 710450 710678 . + 0 ID=Thaps31627;Parent=Thaps31627;rank=3 chr1 . exon 710450 710678 . + . ID=Thaps31627.3;Parent=Thaps31627;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 710739 711037 . + 0 ID=Thaps31627;Parent=Thaps31627;rank=4 chr1 . exon 710739 711037 . + . ID=Thaps31627.4;Parent=Thaps31627;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 718604 718882 . + . ID=Thaps1118.2;Parent=Thaps1118;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 727303 728194 . + . ID=Thaps1122;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ13];external_name=Thaps1122;logic_name=jgi_thaps3 chr1 ensembl transcript 727303 728194 . + . ID=Thaps1122;Parent=Thaps1122;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 727303 727357 . + 0 ID=Thaps1122;Parent=Thaps1122;rank=1 chr1 . exon 727303 727357 . + . ID=Thaps1122.1;Parent=Thaps1122;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 727455 727617 . + 0 ID=Thaps1122;Parent=Thaps1122;rank=2 chr1 . exon 727455 727617 . + . ID=Thaps1122.2;Parent=Thaps1122;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 727704 728160 . + 0 ID=Thaps1122;Parent=Thaps1122;rank=3 chr1 . exon 727704 728160 . + . ID=Thaps1122.3;Parent=Thaps1122;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 728189 728194 . + 0 ID=Thaps1122;Parent=Thaps1122;rank=4 chr1 . exon 728189 728194 . + . ID=Thaps1122.4;Parent=Thaps1122;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 719035 720628 . - . ID=Thaps260818;biotype=protein_coding;description=Rib72-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ11];external_name=Thaps260818;logic_name=jgi_thaps3 chr1 ensembl transcript 719035 720628 . - . ID=Thaps260818;Parent=Thaps260818;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 719035 720628 . - 0 ID=Thaps260818;Parent=Thaps260818;rank=1 chr1 . exon 719035 720628 . - . ID=Thaps260818.1;Parent=Thaps260818;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl gene 722689 724590 . + . ID=Thaps260819;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 722689 724590 . + . ID=Thaps260819;Parent=Thaps260819;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 722689 722976 . + . ID=Thaps260819.1;Parent=Thaps260819;constitutive=1;rank=1 chr1 . exon 723028 724009 . + . ID=Thaps260819.2;Parent=Thaps260819;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 724022 724590 . + . ID=Thaps260819.3;Parent=Thaps260819;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 724863 726178 . - . ID=Thaps31052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ12];external_name=Thaps31052;logic_name=jgi_thaps3 chr1 ensembl transcript 724863 726178 . - . ID=Thaps31052;Parent=Thaps31052;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 724863 724967 . - 0 ID=Thaps31052;Parent=Thaps31052;rank=3 chr1 . exon 724863 724967 . - . ID=Thaps31052.3;Parent=Thaps31052;constitutive=1;rank=3 chr1 . CDS 725032 725172 . - 0 ID=Thaps31052;Parent=Thaps31052;rank=2 chr1 . exon 725032 725172 . - . ID=Thaps31052.2;Parent=Thaps31052;constitutive=1;rank=2 chr1 . CDS 725237 726178 . - 0 ID=Thaps31052;Parent=Thaps31052;rank=1 chr1 . exon 725237 726178 . - . ID=Thaps31052.1;Parent=Thaps31052;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 736547 738259 . + . ID=Thaps1125;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ16];external_name=Thaps1125;logic_name=jgi_thaps3 chr1 ensembl transcript 736547 738259 . + . ID=Thaps1125;Parent=Thaps1125;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 736547 738259 . + 0 ID=Thaps1125;Parent=Thaps1125;rank=1 chr1 . exon 736547 738259 . + . ID=Thaps1125.1;Parent=Thaps1125;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 728506 731308 . - . ID=Thaps20678;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ14];external_name=Thaps20678;logic_name=jgi_thaps3 chr1 ensembl transcript 728506 731308 . - . ID=Thaps20678;Parent=Thaps20678;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 728506 730664 . - 0 ID=Thaps20678;Parent=Thaps20678;rank=4 chr1 . exon 728506 730664 . - . ID=Thaps20678.4;Parent=Thaps20678;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 730858 730988 . - 0 ID=Thaps20678;Parent=Thaps20678;rank=3 chr1 . exon 730858 730988 . - . ID=Thaps20678.3;Parent=Thaps20678;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 731062 731155 . - 0 ID=Thaps20678;Parent=Thaps20678;rank=2 chr1 . exon 731062 731155 . - . ID=Thaps20678.2;Parent=Thaps20678;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 731296 731308 . - 0 ID=Thaps20678;Parent=Thaps20678;rank=1 chr1 . exon 731296 731308 . - . ID=Thaps20678.1;Parent=Thaps20678;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 731947 736083 . + . ID=Thaps26573;biotype=protein_coding;description=Chelatase of mg-protoporphyrin IX chelatase [Source:UniProtKB/TrEMBL%3BAcc:B8BQ15];external_name=CHLH1;logic_name=jgi_thaps3 chr1 ensembl transcript 731947 736083 . + . ID=Thaps26573;Parent=Thaps26573;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 731947 732529 . + 0 ID=Thaps26573;Parent=Thaps26573;rank=1 chr1 . exon 731947 732529 . + . ID=Thaps26573.1;Parent=Thaps26573;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 732644 736083 . + 0 ID=Thaps26573;Parent=Thaps26573;rank=2 chr1 . exon 732644 736083 . + . ID=Thaps26573.2;Parent=Thaps26573;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 740680 740689 . ? . description=dust chr1 ensembl protein_coding_gene 741453 742160 . + . ID=Thaps20680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ17];external_name=Thaps20680;logic_name=jgi_thaps3 chr1 ensembl transcript 741453 742160 . + . ID=Thaps20680;Parent=Thaps20680;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 741453 742160 . + 0 ID=Thaps20680;Parent=Thaps20680;rank=1 chr1 . exon 741453 742160 . + . ID=Thaps20680.1;Parent=Thaps20680;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 742985 750126 . + . ID=Thaps20681;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ18];external_name=Thaps20681;logic_name=jgi_thaps3 chr1 ensembl transcript 742985 750126 . + . ID=Thaps20681;Parent=Thaps20681;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 742985 743066 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=1 chr1 . exon 742985 743066 . + . ID=Thaps20681.1;Parent=Thaps20681;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 743129 743322 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=2 chr1 . exon 743129 743322 . + . ID=Thaps20681.2;Parent=Thaps20681;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 743539 743873 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=3 chr1 . exon 743539 743873 . + . ID=Thaps20681.3;Parent=Thaps20681;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 743985 745131 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=4 chr1 . exon 743985 745131 . + . ID=Thaps20681.4;Parent=Thaps20681;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 745219 745262 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=5 chr1 . exon 745219 745262 . + . ID=Thaps20681.5;Parent=Thaps20681;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 745345 747577 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=6 chr1 . exon 745345 747577 . + . ID=Thaps20681.6;Parent=Thaps20681;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 747622 747633 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=7 chr1 . exon 747622 747633 . + . ID=Thaps20681.7;Parent=Thaps20681;constitutive=1;rank=7 chr1 . CDS 747669 748205 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=8 chr1 . exon 747669 748205 . + . ID=Thaps20681.8;Parent=Thaps20681;constitutive=1;rank=8 chr1 . CDS 748293 750014 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=9 chr1 . CDS 750121 750126 . + 0 ID=Thaps20681;Parent=Thaps20681;rank=10 chr1 ensembl protein_coding_gene 755546 756527 . - . ID=Thaps1131;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ21];external_name=Thaps1131;logic_name=jgi_thaps3 chr1 ensembl transcript 755546 756527 . - . ID=Thaps1131;Parent=Thaps1131;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 755546 756022 . - 0 ID=Thaps1131;Parent=Thaps1131;rank=2 chr1 . exon 755546 756022 . - . ID=Thaps1131.2;Parent=Thaps1131;constitutive=1;rank=2 chr1 . CDS 756177 756527 . - 0 ID=Thaps1131;Parent=Thaps1131;rank=1 chr1 . exon 756177 756527 . - . ID=Thaps1131.1;Parent=Thaps1131;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 757241 758653 . - . ID=Thaps1132;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ22];external_name=Thaps1132;logic_name=jgi_thaps3 chr1 ensembl transcript 757241 758653 . - . ID=Thaps1132;Parent=Thaps1132;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 757241 758653 . - 0 ID=Thaps1132;Parent=Thaps1132;rank=1 chr1 . exon 757241 758653 . - . ID=Thaps1132.1;Parent=Thaps1132;constitutive=1;rank=1 chr1 . exon 748293 750014 . + . ID=Thaps20681.9;Parent=Thaps20681;constitutive=1;rank=9 chr1 . exon 750121 750126 . + . ID=Thaps20681.10;Parent=Thaps20681;constitutive=1;rank=10 chr1 ensembl protein_coding_gene 750323 753957 . - . ID=Thaps20682;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ19];external_name=Thaps20682;logic_name=jgi_thaps3 chr1 ensembl transcript 750323 753957 . - . ID=Thaps20682;Parent=Thaps20682;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 750323 751377 . - 0 ID=Thaps20682;Parent=Thaps20682;rank=2 chr1 . exon 750323 751377 . - . ID=Thaps20682.2;Parent=Thaps20682;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 751476 753957 . - 0 ID=Thaps20682;Parent=Thaps20682;rank=1 chr1 . exon 751476 753957 . - . ID=Thaps20682.1;Parent=Thaps20682;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 754220 755362 . + . ID=Thaps20683;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ20];external_name=Thaps20683;logic_name=jgi_thaps3 chr1 ensembl transcript 754220 755362 . + . ID=Thaps20683;Parent=Thaps20683;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 754220 755362 . + 0 ID=Thaps20683;Parent=Thaps20683;rank=1 chr1 . exon 754220 755362 . + . ID=Thaps20683.1;Parent=Thaps20683;constitutive=1;rank=1 chr1 . repeat_region 758680 758718 . ? . description=dust chr1 . repeat_region 761509 761516 . ? . description=dust chr1 ensembl protein_coding_gene 761334 762095 . + . ID=Thaps1134;biotype=protein_coding;description=Dual specificity phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BQ24];external_name=Thaps1134;logic_name=jgi_thaps3 chr1 ensembl transcript 761334 762095 . + . ID=Thaps1134;Parent=Thaps1134;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 761334 762095 . + 0 ID=Thaps1134;Parent=Thaps1134;rank=1 chr1 . exon 761334 762095 . + . ID=Thaps1134.1;Parent=Thaps1134;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 762202 762813 . - . ID=Thaps1135;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ25];external_name=Thaps1135;logic_name=jgi_thaps3 chr1 ensembl transcript 762202 762813 . - . ID=Thaps1135;Parent=Thaps1135;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 762202 762813 . - 0 ID=Thaps1135;Parent=Thaps1135;rank=1 chr1 . exon 762202 762813 . - . ID=Thaps1135.1;Parent=Thaps1135;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 764499 765476 . - . ID=Thaps1136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ26];external_name=Thaps1136;logic_name=jgi_thaps3 chr1 ensembl transcript 764499 765476 . - . ID=Thaps1136;Parent=Thaps1136;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 764499 765476 . - 0 ID=Thaps1136;Parent=Thaps1136;rank=1 chr1 . exon 764499 765476 . - . ID=Thaps1136.1;Parent=Thaps1136;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 766063 767380 . + . ID=Thaps1137;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ27];external_name=Thaps1137;logic_name=jgi_thaps3 chr1 ensembl transcript 766063 767380 . + . ID=Thaps1137;Parent=Thaps1137;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 766063 766638 . + 0 ID=Thaps1137;Parent=Thaps1137;rank=1 chr1 . exon 766063 766638 . + . ID=Thaps1137.1;Parent=Thaps1137;constitutive=1;rank=1 chr1 . CDS 766757 767380 . + 0 ID=Thaps1137;Parent=Thaps1137;rank=2 chr1 . exon 766757 767380 . + . ID=Thaps1137.2;Parent=Thaps1137;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 759076 760707 . + . ID=Thaps39022;biotype=protein_coding;description=WD repeat protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ23];external_name=Thaps39022;logic_name=jgi_thaps3 chr1 ensembl transcript 759076 760707 . + . ID=Thaps39022;Parent=Thaps39022;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 759076 759679 . + 0 ID=Thaps39022;Parent=Thaps39022;rank=1 chr1 . exon 759076 759679 . + . ID=Thaps39022.1;Parent=Thaps39022;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 759743 759973 . + 0 ID=Thaps39022;Parent=Thaps39022;rank=2 chr1 . exon 759743 759973 . + . ID=Thaps39022.2;Parent=Thaps39022;constitutive=1;rank=2 chr1 . CDS 760040 760237 . + 0 ID=Thaps39022;Parent=Thaps39022;rank=3 chr1 . exon 760040 760237 . + . ID=Thaps39022.3;Parent=Thaps39022;constitutive=1;rank=3 chr1 . CDS 760322 760707 . + 0 ID=Thaps39022;Parent=Thaps39022;rank=4 chr1 . exon 760322 760707 . + . ID=Thaps39022.4;Parent=Thaps39022;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 777560 779677 . - . ID=Thaps1140;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ30];external_name=Thaps1140;logic_name=jgi_thaps3 chr1 ensembl transcript 777560 779677 . - . ID=Thaps1140;Parent=Thaps1140;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 777560 779677 . - 0 ID=Thaps1140;Parent=Thaps1140;rank=1 chr1 . exon 777560 779677 . - . ID=Thaps1140.1;Parent=Thaps1140;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 775613 777253 . - . ID=Thaps20686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ29];external_name=Thaps20686;logic_name=jgi_thaps3 chr1 ensembl transcript 775613 777253 . - . ID=Thaps20686;Parent=Thaps20686;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 775613 776933 . - 0 ID=Thaps20686;Parent=Thaps20686;rank=3 chr1 . exon 775613 776933 . - . ID=Thaps20686.3;Parent=Thaps20686;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 777010 777104 . - 0 ID=Thaps20686;Parent=Thaps20686;rank=2 chr1 . exon 777010 777104 . - . ID=Thaps20686.2;Parent=Thaps20686;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 777176 777253 . - 0 ID=Thaps20686;Parent=Thaps20686;rank=1 chr1 . exon 777176 777253 . - . ID=Thaps20686.1;Parent=Thaps20686;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 771938 772939 . + . ID=Thaps267963;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ28];external_name=Thaps267963;logic_name=jgi_thaps3 chr1 ensembl transcript 771938 772939 . + . ID=Thaps267963;Parent=Thaps267963;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 771938 771961 . + 0 ID=Thaps267963;Parent=Thaps267963;rank=1 chr1 . exon 771938 771961 . + . ID=Thaps267963.1;Parent=Thaps267963;constitutive=1;rank=1 chr1 . CDS 772214 772339 . + 0 ID=Thaps267963;Parent=Thaps267963;rank=2 chr1 . exon 772214 772339 . + . ID=Thaps267963.2;Parent=Thaps267963;constitutive=1;rank=2 chr1 . CDS 772511 772939 . + 0 ID=Thaps267963;Parent=Thaps267963;rank=3 chr1 . exon 772511 772939 . + . ID=Thaps267963.3;Parent=Thaps267963;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 785853 786521 . + . ID=Thaps1145;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ34];external_name=Thaps1145;logic_name=jgi_thaps3 chr1 ensembl transcript 785853 786521 . + . ID=Thaps1145;Parent=Thaps1145;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 785853 786521 . + 0 ID=Thaps1145;Parent=Thaps1145;rank=1 chr1 . exon 785853 786521 . + . ID=Thaps1145.1;Parent=Thaps1145;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 783084 784489 . + . ID=Thaps14655;biotype=protein_coding;description=Rubisco small subunit small subunit n-methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQ32];external_name=MET;logic_name=jgi_thaps3 chr1 ensembl transcript 783084 784489 . + . ID=Thaps14655;Parent=Thaps14655;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 783084 783617 . + 0 ID=Thaps14655;Parent=Thaps14655;rank=1 chr1 . exon 783084 783617 . + . ID=Thaps14655.1;Parent=Thaps14655;constitutive=1;rank=1 chr1 . CDS 783722 784489 . + 0 ID=Thaps14655;Parent=Thaps14655;rank=2 chr1 . exon 783722 784489 . + . ID=Thaps14655.2;Parent=Thaps14655;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 784817 785270 . - . ID=Thaps20086;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ33];external_name=Thaps20086;logic_name=jgi_thaps3 chr1 ensembl transcript 784817 785270 . - . ID=Thaps20086;Parent=Thaps20086;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 784817 784953 . - 0 ID=Thaps20086;Parent=Thaps20086;rank=2 chr1 . exon 784817 784953 . - . ID=Thaps20086.2;Parent=Thaps20086;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 785114 785270 . - 0 ID=Thaps20086;Parent=Thaps20086;rank=1 chr1 . exon 785114 785270 . - . ID=Thaps20086.1;Parent=Thaps20086;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 786679 787889 . - . ID=Thaps20688;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ35];external_name=Thaps20688;logic_name=jgi_thaps3 chr1 ensembl transcript 786679 787889 . - . ID=Thaps20688;Parent=Thaps20688;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 786679 787260 . - 0 ID=Thaps20688;Parent=Thaps20688;rank=2 chr1 . exon 786679 787260 . - . ID=Thaps20688.2;Parent=Thaps20688;constitutive=1;rank=2 chr1 . CDS 787449 787889 . - 0 ID=Thaps20688;Parent=Thaps20688;rank=1 chr1 . exon 787449 787889 . - . ID=Thaps20688.1;Parent=Thaps20688;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 780995 782002 . - . ID=Thaps31673;biotype=protein_coding;description=Lipoic acid synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BQ31];external_name=Thaps31673;logic_name=jgi_thaps3 chr1 ensembl transcript 780995 782002 . - . ID=Thaps31673;Parent=Thaps31673;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 780995 781633 . - 0 ID=Thaps31673;Parent=Thaps31673;rank=2 chr1 . exon 780995 781633 . - . ID=Thaps31673.2;Parent=Thaps31673;constitutive=1;rank=2 chr1 . CDS 781709 782002 . - 0 ID=Thaps31673;Parent=Thaps31673;rank=1 chr1 . exon 781709 782002 . - . ID=Thaps31673.1;Parent=Thaps31673;constitutive=1;rank=1 chr1 . repeat_region 797000 797052 . ? . description=trf chr1 . repeat_region 797394 797411 . ? . description=dust chr1 ensembl protein_coding_gene 795296 797065 . - . ID=Thaps1149;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ38];external_name=Thaps1149;logic_name=jgi_thaps3 chr1 ensembl transcript 795296 797065 . - . ID=Thaps1149;Parent=Thaps1149;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 795296 797065 . - 0 ID=Thaps1149;Parent=Thaps1149;rank=1 chr1 . exon 795296 797065 . - . ID=Thaps1149.1;Parent=Thaps1149;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 797557 798669 . + . ID=Thaps1150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ39];external_name=Thaps1150;logic_name=jgi_thaps3 chr1 ensembl transcript 797557 798669 . + . ID=Thaps1150;Parent=Thaps1150;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 797557 798669 . + 0 ID=Thaps1150;Parent=Thaps1150;rank=1 chr1 . exon 797557 798669 . + . ID=Thaps1150.1;Parent=Thaps1150;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 789036 790892 . + . ID=Thaps20689;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ36];external_name=Thaps20689;logic_name=jgi_thaps3 chr1 ensembl transcript 789036 790892 . + . ID=Thaps20689;Parent=Thaps20689;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 789036 789203 . + 0 ID=Thaps20689;Parent=Thaps20689;rank=1 chr1 . exon 789036 789203 . + . ID=Thaps20689.1;Parent=Thaps20689;constitutive=1;rank=1 chr1 . CDS 789267 789749 . + 0 ID=Thaps20689;Parent=Thaps20689;rank=2 chr1 . exon 789267 789749 . + . ID=Thaps20689.2;Parent=Thaps20689;constitutive=1;rank=2 chr1 . CDS 789843 790892 . + 0 ID=Thaps20689;Parent=Thaps20689;rank=3 chr1 . exon 789843 790892 . + . ID=Thaps20689.3;Parent=Thaps20689;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 792568 795191 . + . ID=Thaps20690;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ37];external_name=Thaps20690;logic_name=jgi_thaps3 chr1 ensembl transcript 792568 795191 . + . ID=Thaps20690;Parent=Thaps20690;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 792568 793900 . + 0 ID=Thaps20690;Parent=Thaps20690;rank=1 chr1 . exon 792568 793900 . + . ID=Thaps20690.1;Parent=Thaps20690;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 793931 795009 . + 0 ID=Thaps20690;Parent=Thaps20690;rank=2 chr1 . exon 793931 795009 . + . ID=Thaps20690.2;Parent=Thaps20690;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 795084 795191 . + 0 ID=Thaps20690;Parent=Thaps20690;rank=3 chr1 . exon 795084 795191 . + . ID=Thaps20690.3;Parent=Thaps20690;constitutive=1;rank=3 chr1 . biological_region 803693 803694 0.999 - . logic_name=eponine chr1 ensembl protein_coding_gene 803983 805722 . + . ID=Thaps20692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ42];external_name=Thaps20692;logic_name=jgi_thaps3 chr1 ensembl transcript 803983 805722 . + . ID=Thaps20692;Parent=Thaps20692;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 803983 805722 . + 0 ID=Thaps20692;Parent=Thaps20692;rank=1 chr1 . exon 803983 805722 . + . ID=Thaps20692.1;Parent=Thaps20692;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 798828 800969 . - . ID=Thaps267964;biotype=protein_coding;description=Cullin [Source:UniProtKB/TrEMBL%3BAcc:B8BQ40];external_name=Thaps267964;logic_name=jgi_thaps3 chr1 ensembl transcript 798828 800969 . - . ID=Thaps267964;Parent=Thaps267964;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 798828 798839 . - 0 ID=Thaps267964;Parent=Thaps267964;rank=2 chr1 . exon 798828 798839 . - . ID=Thaps267964.2;Parent=Thaps267964;constitutive=1;rank=2 chr1 . CDS 798924 800969 . - 0 ID=Thaps267964;Parent=Thaps267964;rank=1 chr1 . exon 798924 800969 . - . ID=Thaps267964.1;Parent=Thaps267964;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 806731 808193 . + . ID=Thaps31001;biotype=protein_coding;description=Pyrimidine-nucleoside phosphorylase [Source:UniProtKB/TrEMBL%3BAcc:B8BQ44];external_name=Thaps31001;logic_name=jgi_thaps3 chr1 ensembl transcript 806731 808193 . + . ID=Thaps31001;Parent=Thaps31001;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 806731 807849 . + 0 ID=Thaps31001;Parent=Thaps31001;rank=1 chr1 . exon 806731 807849 . + . ID=Thaps31001.1;Parent=Thaps31001;constitutive=1;rank=1 chr1 . CDS 807939 808193 . + 0 ID=Thaps31001;Parent=Thaps31001;rank=2 chr1 . exon 807939 808193 . + . ID=Thaps31001.2;Parent=Thaps31001;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 802989 803413 . - . ID=Thaps31064;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ41];external_name=Thaps31064;logic_name=jgi_thaps3 chr1 ensembl transcript 802989 803413 . - . ID=Thaps31064;Parent=Thaps31064;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 802989 803085 . - 0 ID=Thaps31064;Parent=Thaps31064;rank=2 chr1 . exon 802989 803085 . - . ID=Thaps31064.2;Parent=Thaps31064;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 803268 803413 . - 0 ID=Thaps31064;Parent=Thaps31064;rank=1 chr1 . exon 803268 803413 . - . ID=Thaps31064.1;Parent=Thaps31064;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 806032 806286 . - . ID=Thaps39032;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ43];external_name=Thaps39032;logic_name=jgi_thaps3 chr1 ensembl transcript 806032 806286 . - . ID=Thaps39032;Parent=Thaps39032;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 806032 806286 . - 0 ID=Thaps39032;Parent=Thaps39032;rank=1 chr1 . exon 806032 806286 . - . ID=Thaps39032.1;Parent=Thaps39032;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 808467 809684 . - . ID=Thaps1155;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ45];external_name=Thaps1155;logic_name=jgi_thaps3 chr1 ensembl transcript 808467 809684 . - . ID=Thaps1155;Parent=Thaps1155;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 808467 809684 . - 0 ID=Thaps1155;Parent=Thaps1155;rank=1 chr1 . exon 808467 809684 . - . ID=Thaps1155.1;Parent=Thaps1155;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 809961 811058 . + . ID=Thaps14616;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ46];external_name=Thaps14616;logic_name=jgi_thaps3 chr1 ensembl transcript 809961 811058 . + . ID=Thaps14616;Parent=Thaps14616;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 809961 810337 . + 0 ID=Thaps14616;Parent=Thaps14616;rank=1 chr1 . exon 809961 810337 . + . ID=Thaps14616.1;Parent=Thaps14616;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 810407 811058 . + 0 ID=Thaps14616;Parent=Thaps14616;rank=2 chr1 . exon 810407 811058 . + . ID=Thaps14616.2;Parent=Thaps14616;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 816079 817197 . - . ID=Thaps260829;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ47];external_name=Thaps260829;logic_name=jgi_thaps3 chr1 ensembl transcript 816079 817197 . - . ID=Thaps260829;Parent=Thaps260829;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 816079 816572 . - 0 ID=Thaps260829;Parent=Thaps260829;rank=3 chr1 . exon 816079 816572 . - . ID=Thaps260829.3;Parent=Thaps260829;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 816591 816744 . - 0 ID=Thaps260829;Parent=Thaps260829;rank=2 chr1 . exon 816591 816744 . - . ID=Thaps260829.2;Parent=Thaps260829;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 816778 817197 . - 0 ID=Thaps260829;Parent=Thaps260829;rank=1 chr1 . exon 816778 817197 . - . ID=Thaps260829.1;Parent=Thaps260829;constitutive=1;rank=1 chr1 . repeat_region 821361 821369 . ? . description=dust chr1 . repeat_region 823385 823432 . ? . description=dust chr1 . repeat_region 825086 825093 . ? . description=dust chr1 ensembl protein_coding_gene 823648 824325 . + . ID=Thaps1160;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ49];external_name=Thaps1160;logic_name=jgi_thaps3 chr1 ensembl transcript 823648 824325 . + . ID=Thaps1160;Parent=Thaps1160;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 823648 824325 . + 0 ID=Thaps1160;Parent=Thaps1160;rank=1 chr1 . exon 823648 824325 . + . ID=Thaps1160.1;Parent=Thaps1160;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 824555 825971 . - . ID=Thaps1161;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ50];external_name=Thaps1161;logic_name=jgi_thaps3 chr1 ensembl transcript 824555 825971 . - . ID=Thaps1161;Parent=Thaps1161;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 824555 824638 . - 0 ID=Thaps1161;Parent=Thaps1161;rank=2 chr1 . exon 824555 824638 . - . ID=Thaps1161.2;Parent=Thaps1161;constitutive=1;rank=2 chr1 . CDS 824694 825971 . - 0 ID=Thaps1161;Parent=Thaps1161;rank=1 chr1 . exon 824694 825971 . - . ID=Thaps1161.1;Parent=Thaps1161;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 821540 822989 . - . ID=Thaps20696;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ48];external_name=Thaps20696;logic_name=jgi_thaps3 chr1 ensembl transcript 821540 822989 . - . ID=Thaps20696;Parent=Thaps20696;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 821540 822007 . - 0 ID=Thaps20696;Parent=Thaps20696;rank=4 chr1 . exon 821540 822007 . - . ID=Thaps20696.4;Parent=Thaps20696;constitutive=1;rank=4 chr1 . CDS 822087 822234 . - 0 ID=Thaps20696;Parent=Thaps20696;rank=3 chr1 . exon 822087 822234 . - . ID=Thaps20696.3;Parent=Thaps20696;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 822331 822817 . - 0 ID=Thaps20696;Parent=Thaps20696;rank=2 chr1 . exon 822331 822817 . - . ID=Thaps20696.2;Parent=Thaps20696;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 822926 822989 . - 0 ID=Thaps20696;Parent=Thaps20696;rank=1 chr1 . exon 822926 822989 . - . ID=Thaps20696.1;Parent=Thaps20696;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 827643 829566 . - . ID=Thaps20698;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ51];external_name=Thaps20698;logic_name=jgi_thaps3 chr1 ensembl transcript 827643 829566 . - . ID=Thaps20698;Parent=Thaps20698;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 827643 828410 . - 0 ID=Thaps20698;Parent=Thaps20698;rank=2 chr1 . exon 827643 828410 . - . ID=Thaps20698.2;Parent=Thaps20698;constitutive=1;rank=2 chr1 . CDS 828508 829566 . - 0 ID=Thaps20698;Parent=Thaps20698;rank=1 chr1 . repeat_region 831855 831895 . ? . description=trf chr1 ensembl protein_coding_gene 830939 831676 . + . ID=Thaps1165;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ53];external_name=Thaps1165;logic_name=jgi_thaps3 chr1 ensembl transcript 830939 831676 . + . ID=Thaps1165;Parent=Thaps1165;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 830939 830944 . + 0 ID=Thaps1165;Parent=Thaps1165;rank=1 chr1 . exon 830939 830944 . + . ID=Thaps1165.1;Parent=Thaps1165;constitutive=1;rank=1 chr1 . CDS 831071 831676 . + 0 ID=Thaps1165;Parent=Thaps1165;rank=2 chr1 . exon 831071 831676 . + . ID=Thaps1165.2;Parent=Thaps1165;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 832072 833538 . + . ID=Thaps1166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ54];external_name=Thaps1166;logic_name=jgi_thaps3 chr1 ensembl transcript 832072 833538 . + . ID=Thaps1166;Parent=Thaps1166;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 832072 833538 . + 0 ID=Thaps1166;Parent=Thaps1166;rank=1 chr1 . exon 832072 833538 . + . ID=Thaps1166.1;Parent=Thaps1166;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 836778 838286 . - . ID=Thaps13922;biotype=protein_coding;description=Amino acid transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BQ56];external_name=Thaps13922;logic_name=jgi_thaps3 chr1 ensembl transcript 836778 838286 . - . ID=Thaps13922;Parent=Thaps13922;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 836778 836934 . - 0 ID=Thaps13922;Parent=Thaps13922;rank=2 chr1 . exon 836778 836934 . - . ID=Thaps13922.2;Parent=Thaps13922;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 837001 838286 . - 0 ID=Thaps13922;Parent=Thaps13922;rank=1 chr1 . exon 837001 838286 . - . ID=Thaps13922.1;Parent=Thaps13922;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 829830 830974 . + . ID=Thaps16304;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ52];external_name=Thaps16304;logic_name=jgi_thaps3 chr1 ensembl transcript 829830 830974 . + . ID=Thaps16304;Parent=Thaps16304;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 829830 829877 . + 0 ID=Thaps16304;Parent=Thaps16304;rank=1 chr1 . exon 829830 829877 . + . ID=Thaps16304.1;Parent=Thaps16304;constitutive=1;rank=1 chr1 . CDS 829979 830737 . + 0 ID=Thaps16304;Parent=Thaps16304;rank=2 chr1 . exon 829979 830737 . + . ID=Thaps16304.2;Parent=Thaps16304;constitutive=1;rank=2 chr1 . CDS 830798 830974 . + 0 ID=Thaps16304;Parent=Thaps16304;rank=3 chr1 . exon 830798 830974 . + . ID=Thaps16304.3;Parent=Thaps16304;constitutive=1;rank=3 chr1 . exon 828508 829566 . - . ID=Thaps20698.1;Parent=Thaps20698;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 834906 836477 . + . ID=Thaps39038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ55];external_name=Thaps39038;logic_name=jgi_thaps3 chr1 ensembl transcript 834906 836477 . + . ID=Thaps39038;Parent=Thaps39038;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 834906 835135 . + 0 ID=Thaps39038;Parent=Thaps39038;rank=1 chr1 . exon 834906 835135 . + . ID=Thaps39038.1;Parent=Thaps39038;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 835319 836260 . + 0 ID=Thaps39038;Parent=Thaps39038;rank=2 chr1 . exon 835319 836260 . + . ID=Thaps39038.2;Parent=Thaps39038;constitutive=1;rank=2 chr1 . CDS 836294 836477 . + 0 ID=Thaps39038;Parent=Thaps39038;rank=3 chr1 . exon 836294 836477 . + . ID=Thaps39038.3;Parent=Thaps39038;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . repeat_region 846455 846465 . ? . description=dust chr1 ensembl protein_coding_gene 844135 844533 . - . ID=Thaps1170;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ58];external_name=Thaps1170;logic_name=jgi_thaps3 chr1 ensembl transcript 844135 844533 . - . ID=Thaps1170;Parent=Thaps1170;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 844135 844533 . - 0 ID=Thaps1170;Parent=Thaps1170;rank=1 chr1 . exon 844135 844533 . - . ID=Thaps1170.1;Parent=Thaps1170;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 839081 841339 . + . ID=Thaps31242;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ57];external_name=Thaps31242;logic_name=jgi_thaps3 chr1 ensembl transcript 839081 841339 . + . ID=Thaps31242;Parent=Thaps31242;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 839081 839304 . + 0 ID=Thaps31242;Parent=Thaps31242;rank=1 chr1 . exon 839081 839304 . + . ID=Thaps31242.1;Parent=Thaps31242;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 839374 840134 . + 0 ID=Thaps31242;Parent=Thaps31242;rank=2 chr1 . exon 839374 840134 . + . ID=Thaps31242.2;Parent=Thaps31242;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 840243 841339 . + 0 ID=Thaps31242;Parent=Thaps31242;rank=3 chr1 . exon 840243 841339 . + . ID=Thaps31242.3;Parent=Thaps31242;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . repeat_region 853679 855404 . + . description=Copia7I_TP chr1 . repeat_region 856658 856683 . ? . description=trf chr1 . repeat_region 856904 856974 . + . description=TE2c_TP chr1 ensembl protein_coding_gene 849819 853047 . - . ID=Thaps1172;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ60];external_name=Thaps1172;logic_name=jgi_thaps3 chr1 ensembl transcript 849819 853047 . - . ID=Thaps1172;Parent=Thaps1172;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 849819 850508 . - 0 ID=Thaps1172;Parent=Thaps1172;rank=3 chr1 . exon 849819 850508 . - . ID=Thaps1172.3;Parent=Thaps1172;constitutive=1;rank=3 chr1 . CDS 850600 851539 . - 0 ID=Thaps1172;Parent=Thaps1172;rank=2 chr1 . exon 850600 851539 . - . ID=Thaps1172.2;Parent=Thaps1172;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 851609 853047 . - 0 ID=Thaps1172;Parent=Thaps1172;rank=1 chr1 . exon 851609 853047 . - . ID=Thaps1172.1;Parent=Thaps1172;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 855853 856859 . + . ID=Thaps1173;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ61];external_name=Thaps1173;logic_name=jgi_thaps3 chr1 ensembl transcript 855853 856859 . + . ID=Thaps1173;Parent=Thaps1173;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 855853 856103 . + 0 ID=Thaps1173;Parent=Thaps1173;rank=1 chr1 . exon 855853 856103 . + . ID=Thaps1173.1;Parent=Thaps1173;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 856199 856859 . + 0 ID=Thaps1173;Parent=Thaps1173;rank=2 chr1 . exon 856199 856859 . + . ID=Thaps1173.2;Parent=Thaps1173;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 849168 849775 . + . ID=Thaps260832;biotype=protein_coding;description=Signal peptidase [Source:UniProtKB/TrEMBL%3BAcc:B8BQ59];external_name=Thaps260832;logic_name=jgi_thaps3 chr1 ensembl transcript 849168 849775 . + . ID=Thaps260832;Parent=Thaps260832;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 849168 849353 . + 0 ID=Thaps260832;Parent=Thaps260832;rank=1 chr1 . exon 849168 849353 . + . ID=Thaps260832.1;Parent=Thaps260832;constitutive=1;rank=1 chr1 . CDS 849402 849473 . + 0 ID=Thaps260832;Parent=Thaps260832;rank=2 chr1 . exon 849402 849473 . + . ID=Thaps260832.2;Parent=Thaps260832;constitutive=1;rank=2 chr1 . CDS 849502 849560 . + 0 ID=Thaps260832;Parent=Thaps260832;rank=3 chr1 . exon 849502 849560 . + . ID=Thaps260832.3;Parent=Thaps260832;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 849632 849775 . + 0 ID=Thaps260832;Parent=Thaps260832;rank=4 chr1 . exon 849632 849775 . + . ID=Thaps260832.4;Parent=Thaps260832;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 857339 857635 . - . ID=Thaps30866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ62];external_name=Thaps30866;logic_name=jgi_thaps3 chr1 ensembl transcript 857339 857635 . - . ID=Thaps30866;Parent=Thaps30866;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 857339 857635 . - 0 ID=Thaps30866;Parent=Thaps30866;rank=1 chr1 . exon 857339 857635 . - . ID=Thaps30866.1;Parent=Thaps30866;constitutive=1;rank=1 chr1 . repeat_region 858788 858810 . ? . description=dust chr1 ensembl protein_coding_gene 861064 861870 . - . ID=Thaps1175;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ63];external_name=Thaps1175;logic_name=jgi_thaps3 chr1 ensembl transcript 861064 861870 . - . ID=Thaps1175;Parent=Thaps1175;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 861064 861870 . - 0 ID=Thaps1175;Parent=Thaps1175;rank=1 chr1 . exon 861064 861870 . - . ID=Thaps1175.1;Parent=Thaps1175;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 865659 867335 . + . ID=Thaps20702;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ65];external_name=Thaps20702;logic_name=jgi_thaps3 chr1 ensembl transcript 865659 867335 . + . ID=Thaps20702;Parent=Thaps20702;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 865659 867335 . + 0 ID=Thaps20702;Parent=Thaps20702;rank=1 chr1 . exon 865659 867335 . + . ID=Thaps20702.1;Parent=Thaps20702;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 867602 868991 . - . ID=Thaps20703;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ66];external_name=Thaps20703;logic_name=jgi_thaps3 chr1 ensembl transcript 867602 868991 . - . ID=Thaps20703;Parent=Thaps20703;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 867602 868178 . - 0 ID=Thaps20703;Parent=Thaps20703;rank=2 chr1 . exon 867602 868178 . - . ID=Thaps20703.2;Parent=Thaps20703;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 868276 868991 . - 0 ID=Thaps20703;Parent=Thaps20703;rank=1 chr1 ensembl protein_coding_gene 862582 865112 . - . ID=Thaps260833;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BQ64];external_name=Thaps260833;logic_name=jgi_thaps3 chr1 ensembl transcript 862582 865112 . - . ID=Thaps260833;Parent=Thaps260833;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 862582 862991 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=10 chr1 . exon 862582 862991 . - . ID=Thaps260833.10;Parent=Thaps260833;constitutive=1;ensembl_end_phase=2;rank=10 chr1 . CDS 863061 863195 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=9 chr1 . exon 863061 863195 . - . ID=Thaps260833.9;Parent=Thaps260833;constitutive=1;rank=9 chr1 . CDS 863273 863333 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=8 chr1 . exon 863273 863333 . - . ID=Thaps260833.8;Parent=Thaps260833;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . CDS 863403 863992 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=7 chr1 . exon 863403 863992 . - . ID=Thaps260833.7;Parent=Thaps260833;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 864095 864255 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=6 chr1 . exon 864095 864255 . - . ID=Thaps260833.6;Parent=Thaps260833;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 864335 864364 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=5 chr1 . exon 864335 864364 . - . ID=Thaps260833.5;Parent=Thaps260833;constitutive=1;rank=5 chr1 . CDS 864447 864727 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=4 chr1 . exon 864447 864727 . - . ID=Thaps260833.4;Parent=Thaps260833;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 864764 864848 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=3 chr1 . exon 864764 864848 . - . ID=Thaps260833.3;Parent=Thaps260833;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 864885 864942 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=2 chr1 . exon 864885 864942 . - . ID=Thaps260833.2;Parent=Thaps260833;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 865041 865112 . - 0 ID=Thaps260833;Parent=Thaps260833;rank=1 chr1 . exon 865041 865112 . - . ID=Thaps260833.1;Parent=Thaps260833;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 876703 879163 . + . ID=Thaps1181;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ69];external_name=Thaps1181;logic_name=jgi_thaps3 chr1 ensembl transcript 876703 879163 . + . ID=Thaps1181;Parent=Thaps1181;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 876703 877115 . + 0 ID=Thaps1181;Parent=Thaps1181;rank=1 chr1 . exon 876703 877115 . + . ID=Thaps1181.1;Parent=Thaps1181;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 877197 877425 . + 0 ID=Thaps1181;Parent=Thaps1181;rank=2 chr1 . exon 877197 877425 . + . ID=Thaps1181.2;Parent=Thaps1181;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 877500 878172 . + 0 ID=Thaps1181;Parent=Thaps1181;rank=3 chr1 . exon 877500 878172 . + . ID=Thaps1181.3;Parent=Thaps1181;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 878256 879163 . + 0 ID=Thaps1181;Parent=Thaps1181;rank=4 chr1 . exon 868276 868991 . - . ID=Thaps20703.1;Parent=Thaps20703;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 871294 874990 . + . ID=Thaps260835;biotype=protein_coding;description=Alkaline phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BQ67];external_name=Thaps260835;logic_name=jgi_thaps3 chr1 ensembl transcript 871294 874990 . + . ID=Thaps260835;Parent=Thaps260835;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 871294 871667 . + 0 ID=Thaps260835;Parent=Thaps260835;rank=1 chr1 . exon 871294 871667 . + . ID=Thaps260835.1;Parent=Thaps260835;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 871754 872219 . + 0 ID=Thaps260835;Parent=Thaps260835;rank=2 chr1 . exon 871754 872219 . + . ID=Thaps260835.2;Parent=Thaps260835;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 872299 872754 . + 0 ID=Thaps260835;Parent=Thaps260835;rank=3 chr1 . exon 872299 872754 . + . ID=Thaps260835.3;Parent=Thaps260835;constitutive=1;rank=3 chr1 . CDS 873040 873286 . + 0 ID=Thaps260835;Parent=Thaps260835;rank=4 chr1 . exon 873040 873286 . + . ID=Thaps260835.4;Parent=Thaps260835;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 873365 873826 . + 0 ID=Thaps260835;Parent=Thaps260835;rank=5 chr1 . exon 873365 873826 . + . ID=Thaps260835.5;Parent=Thaps260835;constitutive=1;rank=5 chr1 . CDS 874055 874710 . + 0 ID=Thaps260835;Parent=Thaps260835;rank=6 chr1 . exon 874055 874710 . + . ID=Thaps260835.6;Parent=Thaps260835;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 874783 874990 . + 0 ID=Thaps260835;Parent=Thaps260835;rank=7 chr1 . exon 874783 874990 . + . ID=Thaps260835.7;Parent=Thaps260835;constitutive=1;ensembl_end_phase=1;rank=7 chr1 ensembl protein_coding_gene 875721 876221 . + . ID=Thaps30913;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ68];external_name=Thaps30913;logic_name=jgi_thaps3 chr1 ensembl transcript 875721 876221 . + . ID=Thaps30913;Parent=Thaps30913;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 875721 875894 . + 0 ID=Thaps30913;Parent=Thaps30913;rank=1 chr1 . exon 875721 875894 . + . ID=Thaps30913.1;Parent=Thaps30913;constitutive=1;rank=1 chr1 . CDS 875988 876221 . + 0 ID=Thaps30913;Parent=Thaps30913;rank=2 chr1 . exon 875988 876221 . + . ID=Thaps30913.2;Parent=Thaps30913;constitutive=1;rank=2 chr1 . exon 878256 879163 . + . ID=Thaps1181.4;Parent=Thaps1181;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 882087 883067 . + . ID=Thaps26063;biotype=protein_coding;description=Guanine nucleotide binding protein beta subunit-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ72];external_name=Thaps26063;logic_name=jgi_thaps3 chr1 ensembl transcript 882087 883067 . + . ID=Thaps26063;Parent=Thaps26063;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 882087 883067 . + 0 ID=Thaps26063;Parent=Thaps26063;rank=1 chr1 . exon 882087 883067 . + . ID=Thaps26063.1;Parent=Thaps26063;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 879265 880581 . - . ID=Thaps260838;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ70];external_name=Thaps260838;logic_name=jgi_thaps3 chr1 ensembl transcript 879265 880581 . - . ID=Thaps260838;Parent=Thaps260838;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 879265 880077 . - 0 ID=Thaps260838;Parent=Thaps260838;rank=2 chr1 . exon 879265 880077 . - . ID=Thaps260838.2;Parent=Thaps260838;constitutive=1;rank=2 chr1 . CDS 880159 880581 . - 0 ID=Thaps260838;Parent=Thaps260838;rank=1 chr1 . exon 880159 880581 . - . ID=Thaps260838.1;Parent=Thaps260838;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 883342 885014 . - . ID=Thaps260841;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ73];external_name=Thaps260841;logic_name=jgi_thaps3 chr1 ensembl transcript 883342 885014 . - . ID=Thaps260841;Parent=Thaps260841;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 883342 883703 . - 0 ID=Thaps260841;Parent=Thaps260841;rank=2 chr1 . exon 883342 883703 . - . ID=Thaps260841.2;Parent=Thaps260841;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 883793 885014 . - 0 ID=Thaps260841;Parent=Thaps260841;rank=1 chr1 . exon 883793 885014 . - . ID=Thaps260841.1;Parent=Thaps260841;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 880972 881388 . - . ID=Thaps31084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ71];external_name=Thaps31084;logic_name=jgi_thaps3 chr1 ensembl transcript 880972 881388 . - . ID=Thaps31084;Parent=Thaps31084;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 880972 881388 . - 0 ID=Thaps31084;Parent=Thaps31084;rank=1 chr1 . exon 880972 881388 . - . ID=Thaps31084.1;Parent=Thaps31084;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 885054 889589 . - . ID=Thaps31316;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ74];external_name=Thaps31316;logic_name=jgi_thaps3 chr1 ensembl transcript 885054 889589 . - . ID=Thaps31316;Parent=Thaps31316;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 885054 885228 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=13 chr1 . exon 885054 885228 . - . ID=Thaps31316.13;Parent=Thaps31316;constitutive=1;ensembl_end_phase=1;rank=13 chr1 . CDS 885312 885387 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=12 chr1 . exon 885312 885387 . - . ID=Thaps31316.12;Parent=Thaps31316;constitutive=1;ensembl_end_phase=1;rank=12 chr1 . CDS 885459 885615 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=11 chr1 . exon 885459 885615 . - . ID=Thaps31316.11;Parent=Thaps31316;constitutive=1;ensembl_end_phase=1;rank=11 chr1 . CDS 885692 886081 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=10 chr1 . exon 885692 886081 . - . ID=Thaps31316.10;Parent=Thaps31316;constitutive=1;rank=10 chr1 . CDS 886157 886225 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=9 chr1 . exon 886157 886225 . - . ID=Thaps31316.9;Parent=Thaps31316;constitutive=1;rank=9 chr1 . CDS 886307 886470 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=8 chr1 . exon 886307 886470 . - . ID=Thaps31316.8;Parent=Thaps31316;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . CDS 886544 886929 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=7 chr1 . exon 886544 886929 . - . ID=Thaps31316.7;Parent=Thaps31316;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 887000 887563 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=6 chr1 . exon 887000 887563 . - . ID=Thaps31316.6;Parent=Thaps31316;constitutive=1;rank=6 chr1 . CDS 887661 887816 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=5 chr1 . exon 887661 887816 . - . ID=Thaps31316.5;Parent=Thaps31316;constitutive=1;rank=5 chr1 . CDS 887887 888626 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=4 chr1 . CDS 888716 888788 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=3 chr1 . CDS 888886 889222 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=2 chr1 . CDS 889301 889589 . - 0 ID=Thaps31316;Parent=Thaps31316;rank=1 chr1 . repeat_region 896778 896785 . ? . description=dust chr1 ensembl protein_coding_gene 890038 891006 . - . ID=Thaps1186;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ75];external_name=Thaps1186;logic_name=jgi_thaps3 chr1 ensembl transcript 890038 891006 . - . ID=Thaps1186;Parent=Thaps1186;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 890038 891006 . - 0 ID=Thaps1186;Parent=Thaps1186;rank=1 chr1 . exon 890038 891006 . - . ID=Thaps1186.1;Parent=Thaps1186;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 896977 898389 . - . ID=Thaps20707;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ78];external_name=Thaps20707;logic_name=jgi_thaps3 chr1 ensembl transcript 896977 898389 . - . ID=Thaps20707;Parent=Thaps20707;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 896977 898389 . - 0 ID=Thaps20707;Parent=Thaps20707;rank=1 chr1 . exon 896977 898389 . - . ID=Thaps20707.1;Parent=Thaps20707;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 894677 894935 . - . ID=Thaps260844;biotype=protein_coding;description=Calcium-binding protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ77];external_name=Thaps260844;logic_name=jgi_thaps3 chr1 ensembl transcript 894677 894935 . - . ID=Thaps260844;Parent=Thaps260844;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 894677 894935 . - 0 ID=Thaps260844;Parent=Thaps260844;rank=1 chr1 . exon 894677 894935 . - . ID=Thaps260844.1;Parent=Thaps260844;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 893575 894539 . + . ID=Thaps267971;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ76];external_name=Thaps267971;logic_name=jgi_thaps3 chr1 ensembl transcript 893575 894539 . + . ID=Thaps267971;Parent=Thaps267971;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 893575 893848 . + 0 ID=Thaps267971;Parent=Thaps267971;rank=1 chr1 . exon 893575 893848 . + . ID=Thaps267971.1;Parent=Thaps267971;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 893931 894071 . + 0 ID=Thaps267971;Parent=Thaps267971;rank=2 chr1 . exon 893931 894071 . + . ID=Thaps267971.2;Parent=Thaps267971;constitutive=1;rank=2 chr1 . CDS 894159 894231 . + 0 ID=Thaps267971;Parent=Thaps267971;rank=3 chr1 . exon 894159 894231 . + . ID=Thaps267971.3;Parent=Thaps267971;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 894302 894539 . + 0 ID=Thaps267971;Parent=Thaps267971;rank=4 chr1 . exon 894302 894539 . + . ID=Thaps267971.4;Parent=Thaps267971;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . exon 887887 888626 . - . ID=Thaps31316.4;Parent=Thaps31316;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 888716 888788 . - . ID=Thaps31316.3;Parent=Thaps31316;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . exon 888886 889222 . - . ID=Thaps31316.2;Parent=Thaps31316;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 889301 889589 . - . ID=Thaps31316.1;Parent=Thaps31316;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 902457 904019 . - . ID=Thaps1192;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ81];external_name=Thaps1192;logic_name=jgi_thaps3 chr1 ensembl transcript 902457 904019 . - . ID=Thaps1192;Parent=Thaps1192;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 902457 904019 . - 0 ID=Thaps1192;Parent=Thaps1192;rank=1 chr1 . exon 902457 904019 . - . ID=Thaps1192.1;Parent=Thaps1192;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 904173 905645 . - . ID=Thaps1193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ82];external_name=Thaps1193;logic_name=jgi_thaps3 chr1 ensembl transcript 904173 905645 . - . ID=Thaps1193;Parent=Thaps1193;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 904173 905645 . - 0 ID=Thaps1193;Parent=Thaps1193;rank=1 chr1 . exon 904173 905645 . - . ID=Thaps1193.1;Parent=Thaps1193;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 905875 907350 . - . ID=Thaps1194;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ83];external_name=Thaps1194;logic_name=jgi_thaps3 chr1 ensembl transcript 905875 907350 . - . ID=Thaps1194;Parent=Thaps1194;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 905875 907350 . - 0 ID=Thaps1194;Parent=Thaps1194;rank=1 chr1 . exon 905875 907350 . - . ID=Thaps1194.1;Parent=Thaps1194;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 907638 908261 . + . ID=Thaps1195;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ84];external_name=Thaps1195;logic_name=jgi_thaps3 chr1 ensembl transcript 907638 908261 . + . ID=Thaps1195;Parent=Thaps1195;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 907638 908261 . + 0 ID=Thaps1195;Parent=Thaps1195;rank=1 chr1 . exon 907638 908261 . + . ID=Thaps1195.1;Parent=Thaps1195;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 898931 900124 . + . ID=Thaps20708;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ79];external_name=Thaps20708;logic_name=jgi_thaps3 chr1 ensembl transcript 898931 900124 . + . ID=Thaps20708;Parent=Thaps20708;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 898931 899676 . + 0 ID=Thaps20708;Parent=Thaps20708;rank=1 chr1 . exon 898931 899676 . + . ID=Thaps20708.1;Parent=Thaps20708;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 899758 900124 . + 0 ID=Thaps20708;Parent=Thaps20708;rank=2 chr1 . exon 899758 900124 . + . ID=Thaps20708.2;Parent=Thaps20708;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 900241 901014 . - . ID=Thaps260846;biotype=protein_coding;description=Steroid binding protein 1 [Source:UniProtKB/TrEMBL%3BAcc:B8BQ80];external_name=Thaps260846;logic_name=jgi_thaps3 chr1 ensembl transcript 900241 901014 . - . ID=Thaps260846;Parent=Thaps260846;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 900241 901014 . - 0 ID=Thaps260846;Parent=Thaps260846;rank=1 chr1 . exon 900241 901014 . - . ID=Thaps260846.1;Parent=Thaps260846;constitutive=1;rank=1 chr1 . repeat_region 909650 909658 . ? . description=dust chr1 . repeat_region 911669 911719 . ? . description=dust chr1 . repeat_region 913806 913824 . ? . description=dust chr1 ensembl protein_coding_gene 908653 909561 . - . ID=Thaps1196;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ85];external_name=Thaps1196;logic_name=jgi_thaps3 chr1 ensembl transcript 908653 909561 . - . ID=Thaps1196;Parent=Thaps1196;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 908653 908802 . - 0 ID=Thaps1196;Parent=Thaps1196;rank=2 chr1 . exon 908653 908802 . - . ID=Thaps1196.2;Parent=Thaps1196;constitutive=1;rank=2 chr1 . CDS 908947 909561 . - 0 ID=Thaps1196;Parent=Thaps1196;rank=1 chr1 . exon 908947 909561 . - . ID=Thaps1196.1;Parent=Thaps1196;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 910732 913297 . - . ID=Thaps1197;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ86];external_name=Thaps1197;logic_name=jgi_thaps3 chr1 ensembl transcript 910732 913297 . - . ID=Thaps1197;Parent=Thaps1197;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 910732 911660 . - 0 ID=Thaps1197;Parent=Thaps1197;rank=2 chr1 . exon 910732 911660 . - . ID=Thaps1197.2;Parent=Thaps1197;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 911746 913297 . - 0 ID=Thaps1197;Parent=Thaps1197;rank=1 chr1 . exon 911746 913297 . - . ID=Thaps1197.1;Parent=Thaps1197;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 915842 917635 . - . ID=Thaps20710;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ88];external_name=Thaps20710;logic_name=jgi_thaps3 chr1 ensembl transcript 915842 917635 . - . ID=Thaps20710;Parent=Thaps20710;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 915842 917635 . - 0 ID=Thaps20710;Parent=Thaps20710;rank=1 chr1 . exon 915842 917635 . - . ID=Thaps20710.1;Parent=Thaps20710;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 913486 913716 . - . ID=Thaps267973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ87];external_name=Thaps267973;logic_name=jgi_thaps3 chr1 ensembl transcript 913486 913716 . - . ID=Thaps267973;Parent=Thaps267973;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 913486 913716 . - 0 ID=Thaps267973;Parent=Thaps267973;rank=1 chr1 . exon 913486 913716 . - . ID=Thaps267973.1;Parent=Thaps267973;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 919419 920799 . - . ID=Thaps1201;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ90];external_name=Thaps1201;logic_name=jgi_thaps3 chr1 ensembl transcript 919419 920799 . - . ID=Thaps1201;Parent=Thaps1201;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 919419 919805 . - 0 ID=Thaps1201;Parent=Thaps1201;rank=3 chr1 . exon 919419 919805 . - . ID=Thaps1201.3;Parent=Thaps1201;constitutive=1;rank=3 chr1 . CDS 919887 920694 . - 0 ID=Thaps1201;Parent=Thaps1201;rank=2 chr1 . exon 919887 920694 . - . ID=Thaps1201.2;Parent=Thaps1201;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 920759 920799 . - 0 ID=Thaps1201;Parent=Thaps1201;rank=1 chr1 . exon 920759 920799 . - . ID=Thaps1201.1;Parent=Thaps1201;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 921061 922551 . + . ID=Thaps1202;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ91];external_name=Thaps1202;logic_name=jgi_thaps3 chr1 ensembl transcript 921061 922551 . + . ID=Thaps1202;Parent=Thaps1202;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 921061 922551 . + 0 ID=Thaps1202;Parent=Thaps1202;rank=1 chr1 . exon 921061 922551 . + . ID=Thaps1202.1;Parent=Thaps1202;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 923790 924314 . + . ID=Thaps1203;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ92];external_name=Thaps1203;logic_name=jgi_thaps3 chr1 ensembl transcript 923790 924314 . + . ID=Thaps1203;Parent=Thaps1203;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 923790 924314 . + 0 ID=Thaps1203;Parent=Thaps1203;rank=1 chr1 . exon 923790 924314 . + . ID=Thaps1203.1;Parent=Thaps1203;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 924518 926413 . - . ID=Thaps1204;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ93];external_name=Thaps1204;logic_name=jgi_thaps3 chr1 ensembl transcript 924518 926413 . - . ID=Thaps1204;Parent=Thaps1204;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 924518 925427 . - 0 ID=Thaps1204;Parent=Thaps1204;rank=3 chr1 . exon 924518 925427 . - . ID=Thaps1204.3;Parent=Thaps1204;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 925725 926140 . - 0 ID=Thaps1204;Parent=Thaps1204;rank=2 chr1 . exon 925725 926140 . - . ID=Thaps1204.2;Parent=Thaps1204;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 926216 926413 . - 0 ID=Thaps1204;Parent=Thaps1204;rank=1 chr1 . exon 926216 926413 . - . ID=Thaps1204.1;Parent=Thaps1204;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 927093 928481 . + . ID=Thaps1205;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ94];external_name=Thaps1205;logic_name=jgi_thaps3 chr1 ensembl transcript 927093 928481 . + . ID=Thaps1205;Parent=Thaps1205;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 927093 928481 . + 0 ID=Thaps1205;Parent=Thaps1205;rank=1 chr1 . exon 927093 928481 . + . ID=Thaps1205.1;Parent=Thaps1205;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 917811 919209 . + . ID=Thaps31085;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BQ89];external_name=Thaps31085;logic_name=jgi_thaps3 chr1 ensembl transcript 917811 919209 . + . ID=Thaps31085;Parent=Thaps31085;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 917811 918141 . + 0 ID=Thaps31085;Parent=Thaps31085;rank=1 chr1 . exon 917811 918141 . + . ID=Thaps31085.1;Parent=Thaps31085;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 918248 918299 . + 0 ID=Thaps31085;Parent=Thaps31085;rank=2 chr1 . exon 918248 918299 . + . ID=Thaps31085.2;Parent=Thaps31085;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 918330 918897 . + 0 ID=Thaps31085;Parent=Thaps31085;rank=3 chr1 . exon 918330 918897 . + . ID=Thaps31085.3;Parent=Thaps31085;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 919036 919209 . + 0 ID=Thaps31085;Parent=Thaps31085;rank=4 chr1 . exon 919036 919209 . + . ID=Thaps31085.4;Parent=Thaps31085;constitutive=1;rank=4 chr1 . repeat_region 932685 932692 . ? . description=dust chr1 ensembl protein_coding_gene 935487 935873 . + . ID=Thaps1210;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ99];external_name=Thaps1210;logic_name=jgi_thaps3 chr1 ensembl transcript 935487 935873 . + . ID=Thaps1210;Parent=Thaps1210;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 935487 935873 . + 0 ID=Thaps1210;Parent=Thaps1210;rank=1 chr1 . exon 935487 935873 . + . ID=Thaps1210.1;Parent=Thaps1210;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 928576 929352 . - . ID=Thaps20712;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ95];external_name=Thaps20712;logic_name=jgi_thaps3 chr1 ensembl transcript 928576 929352 . - . ID=Thaps20712;Parent=Thaps20712;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 928576 929352 . - 0 ID=Thaps20712;Parent=Thaps20712;rank=1 chr1 . exon 928576 929352 . - . ID=Thaps20712.1;Parent=Thaps20712;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 930700 932565 . - . ID=Thaps20714;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ97];external_name=Thaps20714;logic_name=jgi_thaps3 chr1 ensembl transcript 930700 932565 . - . ID=Thaps20714;Parent=Thaps20714;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 930700 930898 . - 0 ID=Thaps20714;Parent=Thaps20714;rank=3 chr1 . exon 930700 930898 . - . ID=Thaps20714.3;Parent=Thaps20714;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 930970 932106 . - 0 ID=Thaps20714;Parent=Thaps20714;rank=2 chr1 . exon 930970 932106 . - . ID=Thaps20714.2;Parent=Thaps20714;constitutive=1;rank=2 chr1 . CDS 932198 932565 . - 0 ID=Thaps20714;Parent=Thaps20714;rank=1 chr1 . exon 932198 932565 . - . ID=Thaps20714.1;Parent=Thaps20714;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 932817 934326 . - . ID=Thaps20715;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ98];external_name=Thaps20715;logic_name=jgi_thaps3 chr1 ensembl transcript 932817 934326 . - . ID=Thaps20715;Parent=Thaps20715;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 932817 933290 . - 0 ID=Thaps20715;Parent=Thaps20715;rank=2 chr1 . exon 932817 933290 . - . ID=Thaps20715.2;Parent=Thaps20715;constitutive=1;rank=2 chr1 . CDS 933370 934326 . - 0 ID=Thaps20715;Parent=Thaps20715;rank=1 chr1 . exon 933370 934326 . - . ID=Thaps20715.1;Parent=Thaps20715;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 929679 930602 . + . ID=Thaps260850;biotype=protein_coding;description=KE4%2C-like protein to histidine-rich membrane protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQ96];external_name=KE4;logic_name=jgi_thaps3 chr1 ensembl transcript 929679 930602 . + . ID=Thaps260850;Parent=Thaps260850;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 929679 930238 . + 0 ID=Thaps260850;Parent=Thaps260850;rank=1 chr1 . exon 929679 930238 . + . ID=Thaps260850.1;Parent=Thaps260850;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 930272 930602 . + 0 ID=Thaps260850;Parent=Thaps260850;rank=2 chr1 . exon 930272 930602 . + . ID=Thaps260850.2;Parent=Thaps260850;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 936661 938538 . - . ID=Thaps260852;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQA0];external_name=Thaps260852;logic_name=jgi_thaps3 chr1 ensembl transcript 936661 938538 . - . ID=Thaps260852;Parent=Thaps260852;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 936661 936770 . - 0 ID=Thaps260852;Parent=Thaps260852;rank=6 chr1 . exon 936661 936770 . - . ID=Thaps260852.6;Parent=Thaps260852;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 936819 937040 . - 0 ID=Thaps260852;Parent=Thaps260852;rank=5 chr1 . exon 936819 937040 . - . ID=Thaps260852.5;Parent=Thaps260852;constitutive=1;rank=5 chr1 . CDS 937248 937598 . - 0 ID=Thaps260852;Parent=Thaps260852;rank=4 chr1 . exon 937248 937598 . - . ID=Thaps260852.4;Parent=Thaps260852;constitutive=1;rank=4 chr1 . CDS 937632 937924 . - 0 ID=Thaps260852;Parent=Thaps260852;rank=3 chr1 . exon 937632 937924 . - . ID=Thaps260852.3;Parent=Thaps260852;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 938024 938041 . - 0 ID=Thaps260852;Parent=Thaps260852;rank=2 chr1 . CDS 938378 938538 . - 0 ID=Thaps260852;Parent=Thaps260852;rank=1 chr1 . repeat_region 937903 937950 . ? . description=trf chr1 . repeat_region 941530 941566 . ? . description=trf chr1 ensembl protein_coding_gene 941633 944319 . - . ID=Thaps1214;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQA3];external_name=Thaps1214;logic_name=jgi_thaps3 chr1 ensembl transcript 941633 944319 . - . ID=Thaps1214;Parent=Thaps1214;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 941633 942074 . - 0 ID=Thaps1214;Parent=Thaps1214;rank=5 chr1 . exon 941633 942074 . - . ID=Thaps1214.5;Parent=Thaps1214;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 942131 942568 . - 0 ID=Thaps1214;Parent=Thaps1214;rank=4 chr1 . exon 942131 942568 . - . ID=Thaps1214.4;Parent=Thaps1214;constitutive=1;rank=4 chr1 . CDS 942745 943269 . - 0 ID=Thaps1214;Parent=Thaps1214;rank=3 chr1 . exon 942745 943269 . - . ID=Thaps1214.3;Parent=Thaps1214;constitutive=1;rank=3 chr1 . CDS 943292 943631 . - 0 ID=Thaps1214;Parent=Thaps1214;rank=2 chr1 . exon 943292 943631 . - . ID=Thaps1214.2;Parent=Thaps1214;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 943914 944319 . - 0 ID=Thaps1214;Parent=Thaps1214;rank=1 chr1 . exon 943914 944319 . - . ID=Thaps1214.1;Parent=Thaps1214;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 944708 945736 . + . ID=Thaps1215;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQA4];external_name=Thaps1215;logic_name=jgi_thaps3 chr1 ensembl transcript 944708 945736 . + . ID=Thaps1215;Parent=Thaps1215;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 944708 945736 . + 0 ID=Thaps1215;Parent=Thaps1215;rank=1 chr1 . exon 944708 945736 . + . ID=Thaps1215.1;Parent=Thaps1215;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 946078 950511 . + . ID=Thaps1216;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQA5];external_name=Thaps1216;logic_name=jgi_thaps3 chr1 ensembl transcript 946078 950511 . + . ID=Thaps1216;Parent=Thaps1216;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 946078 950511 . + 0 ID=Thaps1216;Parent=Thaps1216;rank=1 chr1 . exon 946078 950511 . + . ID=Thaps1216.1;Parent=Thaps1216;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 940782 941537 . + . ID=Thaps20718;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQA2];external_name=Thaps20718;logic_name=jgi_thaps3 chr1 ensembl transcript 940782 941537 . + . ID=Thaps20718;Parent=Thaps20718;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 940782 941537 . + 0 ID=Thaps20718;Parent=Thaps20718;rank=1 chr1 . exon 940782 941537 . + . ID=Thaps20718.1;Parent=Thaps20718;constitutive=1;rank=1 chr1 . exon 938024 938041 . - . ID=Thaps260852.2;Parent=Thaps260852;constitutive=1;rank=2 chr1 . exon 938378 938538 . - . ID=Thaps260852.1;Parent=Thaps260852;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 939195 940523 . + . ID=Thaps267977;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQA1];external_name=Thaps267977;logic_name=jgi_thaps3 chr1 ensembl transcript 939195 940523 . + . ID=Thaps267977;Parent=Thaps267977;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 939195 939796 . + 0 ID=Thaps267977;Parent=Thaps267977;rank=1 chr1 . exon 939195 939796 . + . ID=Thaps267977.1;Parent=Thaps267977;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 939851 940278 . + 0 ID=Thaps267977;Parent=Thaps267977;rank=2 chr1 . exon 939851 940278 . + . ID=Thaps267977.2;Parent=Thaps267977;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 940366 940523 . + 0 ID=Thaps267977;Parent=Thaps267977;rank=3 chr1 . exon 940366 940523 . + . ID=Thaps267977.3;Parent=Thaps267977;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . repeat_region 953145 953163 . ? . description=dust chr1 ensembl protein_coding_gene 950608 952703 . - . ID=Thaps1217;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQA6];external_name=Thaps1217;logic_name=jgi_thaps3 chr1 ensembl transcript 950608 952703 . - . ID=Thaps1217;Parent=Thaps1217;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 950608 951685 . - 0 ID=Thaps1217;Parent=Thaps1217;rank=3 chr1 . exon 950608 951685 . - . ID=Thaps1217.3;Parent=Thaps1217;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 951793 952301 . - 0 ID=Thaps1217;Parent=Thaps1217;rank=2 chr1 . exon 951793 952301 . - . ID=Thaps1217.2;Parent=Thaps1217;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 952413 952703 . - 0 ID=Thaps1217;Parent=Thaps1217;rank=1 chr1 . exon 952413 952703 . - . ID=Thaps1217.1;Parent=Thaps1217;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 953090 956799 . + . ID=Thaps1218;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQA7];external_name=Thaps1218;logic_name=jgi_thaps3 chr1 ensembl transcript 953090 956799 . + . ID=Thaps1218;Parent=Thaps1218;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 953090 953496 . + 0 ID=Thaps1218;Parent=Thaps1218;rank=1 chr1 . exon 953090 953496 . + . ID=Thaps1218.1;Parent=Thaps1218;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 953600 953677 . + 0 ID=Thaps1218;Parent=Thaps1218;rank=2 chr1 . exon 953600 953677 . + . ID=Thaps1218.2;Parent=Thaps1218;constitutive=1;rank=2 chr1 . CDS 953791 953922 . + 0 ID=Thaps1218;Parent=Thaps1218;rank=3 chr1 . exon 953791 953922 . + . ID=Thaps1218.3;Parent=Thaps1218;constitutive=1;rank=3 chr1 . CDS 954018 954377 . + 0 ID=Thaps1218;Parent=Thaps1218;rank=4 chr1 . exon 954018 954377 . + . ID=Thaps1218.4;Parent=Thaps1218;constitutive=1;rank=4 chr1 . CDS 954815 955418 . + 0 ID=Thaps1218;Parent=Thaps1218;rank=5 chr1 . exon 954815 955418 . + . ID=Thaps1218.5;Parent=Thaps1218;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 955498 956799 . + 0 ID=Thaps1218;Parent=Thaps1218;rank=6 chr1 . exon 955498 956799 . + . ID=Thaps1218.6;Parent=Thaps1218;constitutive=1;rank=6 chr1 ensembl protein_coding_gene 956929 957952 . - . ID=Thaps1219;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQA8];external_name=Thaps1219;logic_name=jgi_thaps3 chr1 ensembl transcript 956929 957952 . - . ID=Thaps1219;Parent=Thaps1219;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 956929 957483 . - 0 ID=Thaps1219;Parent=Thaps1219;rank=2 chr1 . exon 956929 957483 . - . ID=Thaps1219.2;Parent=Thaps1219;constitutive=1;rank=2 chr1 . CDS 957596 957952 . - 0 ID=Thaps1219;Parent=Thaps1219;rank=1 chr1 . exon 957596 957952 . - . ID=Thaps1219.1;Parent=Thaps1219;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 967031 968693 . + . ID=Thaps1224;biotype=protein_coding;description=MFS transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BQB3];external_name=Thaps1224;logic_name=jgi_thaps3 chr1 ensembl transcript 967031 968693 . + . ID=Thaps1224;Parent=Thaps1224;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 967031 967126 . + 0 ID=Thaps1224;Parent=Thaps1224;rank=1 chr1 . exon 967031 967126 . + . ID=Thaps1224.1;Parent=Thaps1224;constitutive=1;rank=1 chr1 . CDS 967210 967931 . + 0 ID=Thaps1224;Parent=Thaps1224;rank=2 chr1 . exon 967210 967931 . + . ID=Thaps1224.2;Parent=Thaps1224;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 968008 968378 . + 0 ID=Thaps1224;Parent=Thaps1224;rank=3 chr1 . CDS 968455 968693 . + 0 ID=Thaps1224;Parent=Thaps1224;rank=4 chr1 ensembl protein_coding_gene 959211 960660 . + . ID=Thaps174;biotype=protein_coding;description=Propionate coa-transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQA9];external_name=Thaps174;logic_name=jgi_thaps3 chr1 ensembl transcript 959211 960660 . + . ID=Thaps174;Parent=Thaps174;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 959211 960494 . + 0 ID=Thaps174;Parent=Thaps174;rank=1 chr1 . exon 959211 960494 . + . ID=Thaps174.1;Parent=Thaps174;constitutive=1;rank=1 chr1 . CDS 960634 960660 . + 0 ID=Thaps174;Parent=Thaps174;rank=2 chr1 . exon 960634 960660 . + . ID=Thaps174.2;Parent=Thaps174;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 965439 966811 . - . ID=Thaps20719;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQB2];external_name=Thaps20719;logic_name=jgi_thaps3 chr1 ensembl transcript 965439 966811 . - . ID=Thaps20719;Parent=Thaps20719;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 965439 966203 . - 0 ID=Thaps20719;Parent=Thaps20719;rank=2 chr1 . exon 965439 966203 . - . ID=Thaps20719.2;Parent=Thaps20719;constitutive=1;rank=2 chr1 . CDS 966371 966811 . - 0 ID=Thaps20719;Parent=Thaps20719;rank=1 chr1 . exon 966371 966811 . - . ID=Thaps20719.1;Parent=Thaps20719;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 964202 965212 . + . ID=Thaps260856;biotype=protein_coding;description=Actin%2C actin related protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQB1];external_name=Thaps260856;logic_name=jgi_thaps3 chr1 ensembl transcript 964202 965212 . + . ID=Thaps260856;Parent=Thaps260856;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 964202 964453 . + 0 ID=Thaps260856;Parent=Thaps260856;rank=1 chr1 . exon 964202 964453 . + . ID=Thaps260856.1;Parent=Thaps260856;constitutive=1;rank=1 chr1 . CDS 964772 965092 . + 0 ID=Thaps260856;Parent=Thaps260856;rank=2 chr1 . exon 964772 965092 . + . ID=Thaps260856.2;Parent=Thaps260856;constitutive=1;rank=2 chr1 . CDS 965177 965212 . + 0 ID=Thaps260856;Parent=Thaps260856;rank=3 chr1 . exon 965177 965212 . + . ID=Thaps260856.3;Parent=Thaps260856;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 961205 962563 . - . ID=Thaps31256;biotype=protein_coding;description=Queuine tRNA-ribosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQB0];external_name=Thaps31256;logic_name=jgi_thaps3 chr1 ensembl transcript 961205 962563 . - . ID=Thaps31256;Parent=Thaps31256;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 961205 962055 . - 0 ID=Thaps31256;Parent=Thaps31256;rank=2 chr1 . exon 961205 962055 . - . ID=Thaps31256.2;Parent=Thaps31256;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 962176 962563 . - 0 ID=Thaps31256;Parent=Thaps31256;rank=1 chr1 . exon 962176 962563 . - . ID=Thaps31256.1;Parent=Thaps31256;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 970906 970980 . + . description=Harbinger1_TP chr1 . repeat_region 971767 971807 . ? . description=trf chr1 . exon 968008 968378 . + . ID=Thaps1224.3;Parent=Thaps1224;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 968455 968693 . + . ID=Thaps1224.4;Parent=Thaps1224;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 969181 970434 . + . ID=Thaps1225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQB4];external_name=Thaps1225;logic_name=jgi_thaps3 chr1 ensembl transcript 969181 970434 . + . ID=Thaps1225;Parent=Thaps1225;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 969181 970434 . + 0 ID=Thaps1225;Parent=Thaps1225;rank=1 chr1 . exon 969181 970434 . + . ID=Thaps1225.1;Parent=Thaps1225;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 970465 972599 . - . ID=Thaps20720;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQB5];external_name=Thaps20720;logic_name=jgi_thaps3 chr1 ensembl transcript 970465 972599 . - . ID=Thaps20720;Parent=Thaps20720;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 970465 972201 . - 0 ID=Thaps20720;Parent=Thaps20720;rank=2 chr1 . exon 970465 972201 . - . ID=Thaps20720.2;Parent=Thaps20720;constitutive=1;rank=2 chr1 . CDS 972309 972599 . - 0 ID=Thaps20720;Parent=Thaps20720;rank=1 chr1 . exon 972309 972599 . - . ID=Thaps20720.1;Parent=Thaps20720;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 975210 976948 . - . ID=Thaps267979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQB7];external_name=Thaps267979;logic_name=jgi_thaps3 chr1 ensembl transcript 975210 976948 . - . ID=Thaps267979;Parent=Thaps267979;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 975210 975742 . - 0 ID=Thaps267979;Parent=Thaps267979;rank=4 chr1 . exon 975210 975742 . - . ID=Thaps267979.4;Parent=Thaps267979;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 975827 976562 . - 0 ID=Thaps267979;Parent=Thaps267979;rank=3 chr1 . exon 975827 976562 . - . ID=Thaps267979.3;Parent=Thaps267979;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 976652 976856 . - 0 ID=Thaps267979;Parent=Thaps267979;rank=2 chr1 . exon 976652 976856 . - . ID=Thaps267979.2;Parent=Thaps267979;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 976944 976948 . - 0 ID=Thaps267979;Parent=Thaps267979;rank=1 chr1 . exon 976944 976948 . - . ID=Thaps267979.1;Parent=Thaps267979;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 972893 974034 . + . ID=Thaps31193;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQB6];external_name=Thaps31193;logic_name=jgi_thaps3 chr1 ensembl transcript 972893 974034 . + . ID=Thaps31193;Parent=Thaps31193;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 972893 972941 . + 0 ID=Thaps31193;Parent=Thaps31193;rank=1 chr1 . exon 972893 972941 . + . ID=Thaps31193.1;Parent=Thaps31193;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 973127 973356 . + 0 ID=Thaps31193;Parent=Thaps31193;rank=2 chr1 . exon 973127 973356 . + . ID=Thaps31193.2;Parent=Thaps31193;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 973426 974034 . + 0 ID=Thaps31193;Parent=Thaps31193;rank=3 chr1 . exon 973426 974034 . + . ID=Thaps31193.3;Parent=Thaps31193;constitutive=1;rank=3 chr1 . repeat_region 978479 978487 . ? . description=dust chr1 . repeat_region 984647 984710 . ? . description=dust chr1 ensembl protein_coding_gene 979348 981469 . - . ID=Thaps1230;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQB9];external_name=Thaps1230;logic_name=jgi_thaps3 chr1 ensembl transcript 979348 981469 . - . ID=Thaps1230;Parent=Thaps1230;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 979348 979370 . - 0 ID=Thaps1230;Parent=Thaps1230;rank=4 chr1 . exon 979348 979370 . - . ID=Thaps1230.4;Parent=Thaps1230;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 979409 980959 . - 0 ID=Thaps1230;Parent=Thaps1230;rank=3 chr1 . exon 979409 980959 . - . ID=Thaps1230.3;Parent=Thaps1230;constitutive=1;rank=3 chr1 . CDS 981054 981173 . - 0 ID=Thaps1230;Parent=Thaps1230;rank=2 chr1 . exon 981054 981173 . - . ID=Thaps1230.2;Parent=Thaps1230;constitutive=1;rank=2 chr1 . CDS 981289 981469 . - 0 ID=Thaps1230;Parent=Thaps1230;rank=1 chr1 . exon 981289 981469 . - . ID=Thaps1230.1;Parent=Thaps1230;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 978119 979197 . + . ID=Thaps20723;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQB8];external_name=Thaps20723;logic_name=jgi_thaps3 chr1 ensembl transcript 978119 979197 . + . ID=Thaps20723;Parent=Thaps20723;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 978119 978369 . + 0 ID=Thaps20723;Parent=Thaps20723;rank=1 chr1 . exon 978119 978369 . + . ID=Thaps20723.1;Parent=Thaps20723;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 978441 978456 . + 0 ID=Thaps20723;Parent=Thaps20723;rank=2 chr1 . exon 978441 978456 . + . ID=Thaps20723.2;Parent=Thaps20723;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 978543 978597 . + 0 ID=Thaps20723;Parent=Thaps20723;rank=3 chr1 . exon 978543 978597 . + . ID=Thaps20723.3;Parent=Thaps20723;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 978692 979197 . + 0 ID=Thaps20723;Parent=Thaps20723;rank=4 chr1 . exon 978692 979197 . + . ID=Thaps20723.4;Parent=Thaps20723;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 985790 987134 . + . ID=Thaps20726;biotype=protein_coding;description=Malate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BQC2];external_name=MDH1;logic_name=jgi_thaps3 chr1 ensembl transcript 985790 987134 . + . ID=Thaps20726;Parent=Thaps20726;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 985790 986124 . + 0 ID=Thaps20726;Parent=Thaps20726;rank=1 chr1 . exon 985790 986124 . + . ID=Thaps20726.1;Parent=Thaps20726;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 986284 986414 . + 0 ID=Thaps20726;Parent=Thaps20726;rank=2 chr1 . exon 986284 986414 . + . ID=Thaps20726.2;Parent=Thaps20726;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 986542 987134 . + 0 ID=Thaps20726;Parent=Thaps20726;rank=3 chr1 . exon 986542 987134 . + . ID=Thaps20726.3;Parent=Thaps20726;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 982552 983139 . - . ID=Thaps260861;biotype=protein_coding;description=Msp1 protein-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQC0];external_name=Thaps260861;logic_name=jgi_thaps3 chr1 ensembl transcript 982552 983139 . - . ID=Thaps260861;Parent=Thaps260861;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 982552 982808 . - 0 ID=Thaps260861;Parent=Thaps260861;rank=2 chr1 . exon 982552 982808 . - . ID=Thaps260861.2;Parent=Thaps260861;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 982839 983139 . - 0 ID=Thaps260861;Parent=Thaps260861;rank=1 chr1 . exon 982839 983139 . - . ID=Thaps260861.1;Parent=Thaps260861;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 984745 985311 . - . ID=Thaps260862;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQC1];external_name=Thaps260862;logic_name=jgi_thaps3 chr1 ensembl transcript 984745 985311 . - . ID=Thaps260862;Parent=Thaps260862;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 984745 985078 . - 0 ID=Thaps260862;Parent=Thaps260862;rank=2 chr1 . exon 984745 985078 . - . ID=Thaps260862.2;Parent=Thaps260862;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 985139 985311 . - 0 ID=Thaps260862;Parent=Thaps260862;rank=1 chr1 . exon 985139 985311 . - . ID=Thaps260862.1;Parent=Thaps260862;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 991794 992189 . - . ID=Thaps19421;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQC3];external_name=Thaps19421;logic_name=jgi_thaps3 chr1 ensembl transcript 991794 992189 . - . ID=Thaps19421;Parent=Thaps19421;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 991794 992189 . - 0 ID=Thaps19421;Parent=Thaps19421;rank=1 chr1 . exon 991794 992189 . - . ID=Thaps19421.1;Parent=Thaps19421;constitutive=1;rank=1 chr1 . repeat_region 1007611 1007630 . ? . description=trf chr1 . repeat_region 1016342 1016374 . ? . description=trf chr1 . repeat_region 1016342 1016374 . ? . description=dust chr1 ensembl protein_coding_gene 1017247 1018989 . - . ID=Thaps1237;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQC6];external_name=Thaps1237;logic_name=jgi_thaps3 chr1 ensembl transcript 1017247 1018989 . - . ID=Thaps1237;Parent=Thaps1237;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1017247 1017272 . - 0 ID=Thaps1237;Parent=Thaps1237;rank=2 chr1 . exon 1017247 1017272 . - . ID=Thaps1237.2;Parent=Thaps1237;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1017507 1018989 . - 0 ID=Thaps1237;Parent=Thaps1237;rank=1 chr1 . exon 1017507 1018989 . - . ID=Thaps1237.1;Parent=Thaps1237;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1011171 1016046 . - . ID=Thaps20728;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQC5];external_name=Thaps20728;logic_name=jgi_thaps3 chr1 ensembl transcript 1011171 1016046 . - . ID=Thaps20728;Parent=Thaps20728;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1011171 1011628 . - 0 ID=Thaps20728;Parent=Thaps20728;rank=3 chr1 . exon 1011171 1011628 . - . ID=Thaps20728.3;Parent=Thaps20728;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1011717 1012745 . - 0 ID=Thaps20728;Parent=Thaps20728;rank=2 chr1 . exon 1011717 1012745 . - . ID=Thaps20728.2;Parent=Thaps20728;constitutive=1;rank=2 chr1 . CDS 1012848 1016046 . - 0 ID=Thaps20728;Parent=Thaps20728;rank=1 chr1 . exon 1012848 1016046 . - . ID=Thaps20728.1;Parent=Thaps20728;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1010158 1011023 . + . ID=Thaps260866;biotype=protein_coding;description=ORC2%2C origin recognition complex subunit 2 [Source:UniProtKB/TrEMBL%3BAcc:B8BQC4];external_name=ORC2;logic_name=jgi_thaps3 chr1 ensembl transcript 1010158 1011023 . + . ID=Thaps260866;Parent=Thaps260866;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1010158 1011023 . + 0 ID=Thaps260866;Parent=Thaps260866;rank=1 chr1 . exon 1010158 1011023 . + . ID=Thaps260866.1;Parent=Thaps260866;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 1023029 1023066 . + . description=scaffold_12_102_1_244538_244924 chr1 . repeat_region 1023152 1023379 . + . description=scaffold_10_75_1_198912_200279 chr1 . repeat_region 1023462 1023649 . + . description=scaffold_10_75_1_198912_200279 chr1 ensembl protein_coding_gene 1019298 1019738 . + . ID=Thaps1238;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQC7];external_name=Thaps1238;logic_name=jgi_thaps3 chr1 ensembl transcript 1019298 1019738 . + . ID=Thaps1238;Parent=Thaps1238;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1019298 1019738 . + 0 ID=Thaps1238;Parent=Thaps1238;rank=1 chr1 . exon 1019298 1019738 . + . ID=Thaps1238.1;Parent=Thaps1238;constitutive=1;rank=1 chr1 ensembl gene 1023031 1023378 . - . ID=Thaps260868;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 1023031 1023378 . - . ID=Thaps260868;Parent=Thaps260868;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 1023031 1023074 . - . ID=Thaps260868.2;Parent=Thaps260868;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 1023154 1023378 . - . ID=Thaps260868.1;Parent=Thaps260868;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1019844 1020501 . - . ID=Thaps30871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQC8];external_name=Thaps30871;logic_name=jgi_thaps3 chr1 ensembl transcript 1019844 1020501 . - . ID=Thaps30871;Parent=Thaps30871;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1019844 1020125 . - 0 ID=Thaps30871;Parent=Thaps30871;rank=2 chr1 . exon 1019844 1020125 . - . ID=Thaps30871.2;Parent=Thaps30871;constitutive=1;rank=2 chr1 . CDS 1020187 1020501 . - 0 ID=Thaps30871;Parent=Thaps30871;rank=1 chr1 . exon 1020187 1020501 . - . ID=Thaps30871.1;Parent=Thaps30871;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1025215 1026980 . - . ID=Thaps31575;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQC9];external_name=Thaps31575;logic_name=jgi_thaps3 chr1 ensembl transcript 1025215 1026980 . - . ID=Thaps31575;Parent=Thaps31575;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1025215 1025530 . - 0 ID=Thaps31575;Parent=Thaps31575;rank=5 chr1 . exon 1025215 1025530 . - . ID=Thaps31575.5;Parent=Thaps31575;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 1025611 1026126 . - 0 ID=Thaps31575;Parent=Thaps31575;rank=4 chr1 . exon 1025611 1026126 . - . ID=Thaps31575.4;Parent=Thaps31575;constitutive=1;rank=4 chr1 . CDS 1026192 1026611 . - 0 ID=Thaps31575;Parent=Thaps31575;rank=3 chr1 . exon 1026192 1026611 . - . ID=Thaps31575.3;Parent=Thaps31575;constitutive=1;rank=3 chr1 . CDS 1026657 1026765 . - 0 ID=Thaps31575;Parent=Thaps31575;rank=2 chr1 . exon 1026657 1026765 . - . ID=Thaps31575.2;Parent=Thaps31575;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1026851 1026980 . - 0 ID=Thaps31575;Parent=Thaps31575;rank=1 chr1 . exon 1026851 1026980 . - . ID=Thaps31575.1;Parent=Thaps31575;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 1027615 1027623 . ? . description=dust chr1 . repeat_region 1031521 1031579 . ? . description=dust chr1 ensembl protein_coding_gene 1028341 1028940 . - . ID=Thaps1241;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQD0];external_name=Thaps1241;logic_name=jgi_thaps3 chr1 ensembl transcript 1028341 1028940 . - . ID=Thaps1241;Parent=Thaps1241;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1028341 1028940 . - 0 ID=Thaps1241;Parent=Thaps1241;rank=1 chr1 . exon 1028341 1028940 . - . ID=Thaps1241.1;Parent=Thaps1241;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1032047 1033510 . + . ID=Thaps1243;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQD2];external_name=Thaps1243;logic_name=jgi_thaps3 chr1 ensembl transcript 1032047 1033510 . + . ID=Thaps1243;Parent=Thaps1243;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1032047 1033510 . + 0 ID=Thaps1243;Parent=Thaps1243;rank=1 chr1 . exon 1032047 1033510 . + . ID=Thaps1243.1;Parent=Thaps1243;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1033826 1035018 . + . ID=Thaps1244;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQD3];external_name=Thaps1244;logic_name=jgi_thaps3 chr1 ensembl transcript 1033826 1035018 . + . ID=Thaps1244;Parent=Thaps1244;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1033826 1034945 . + 0 ID=Thaps1244;Parent=Thaps1244;rank=1 chr1 . exon 1033826 1034945 . + . ID=Thaps1244.1;Parent=Thaps1244;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1035011 1035018 . + 0 ID=Thaps1244;Parent=Thaps1244;rank=2 chr1 . exon 1035011 1035018 . + . ID=Thaps1244.2;Parent=Thaps1244;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1029873 1031105 . + . ID=Thaps20731;biotype=protein_coding;description=Mitochondrial carrier protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQD1];external_name=Thaps20731;logic_name=jgi_thaps3 chr1 ensembl transcript 1029873 1031105 . + . ID=Thaps20731;Parent=Thaps20731;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1029873 1030005 . + 0 ID=Thaps20731;Parent=Thaps20731;rank=1 chr1 . exon 1029873 1030005 . + . ID=Thaps20731.1;Parent=Thaps20731;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1030115 1030316 . + 0 ID=Thaps20731;Parent=Thaps20731;rank=2 chr1 . exon 1030115 1030316 . + . ID=Thaps20731.2;Parent=Thaps20731;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1030444 1030928 . + 0 ID=Thaps20731;Parent=Thaps20731;rank=3 chr1 . exon 1030444 1030928 . + . ID=Thaps20731.3;Parent=Thaps20731;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1031008 1031105 . + 0 ID=Thaps20731;Parent=Thaps20731;rank=4 chr1 . exon 1031008 1031105 . + . ID=Thaps20731.4;Parent=Thaps20731;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 1035131 1036860 . - . ID=Thaps20732;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQD4];external_name=Thaps20732;logic_name=jgi_thaps3 chr1 ensembl transcript 1035131 1036860 . - . ID=Thaps20732;Parent=Thaps20732;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1035131 1035302 . - 0 ID=Thaps20732;Parent=Thaps20732;rank=2 chr1 . exon 1035131 1035302 . - . ID=Thaps20732.2;Parent=Thaps20732;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1035365 1036860 . - 0 ID=Thaps20732;Parent=Thaps20732;rank=1 chr1 . exon 1035365 1036860 . - . ID=Thaps20732.1;Parent=Thaps20732;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1036987 1038346 . + . ID=Thaps267987;biotype=protein_coding;description=Cysteine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BQD5];external_name=CYS2;logic_name=jgi_thaps3 chr1 ensembl transcript 1036987 1038346 . + . ID=Thaps267987;Parent=Thaps267987;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1036987 1037242 . + 0 ID=Thaps267987;Parent=Thaps267987;rank=1 chr1 . exon 1036987 1037242 . + . ID=Thaps267987.1;Parent=Thaps267987;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1037357 1037837 . + 0 ID=Thaps267987;Parent=Thaps267987;rank=2 chr1 . exon 1037357 1037837 . + . ID=Thaps267987.2;Parent=Thaps267987;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1037919 1037933 . + 0 ID=Thaps267987;Parent=Thaps267987;rank=3 chr1 . CDS 1038031 1038346 . + 0 ID=Thaps267987;Parent=Thaps267987;rank=4 chr1 ensembl protein_coding_gene 1038636 1039906 . - . ID=Thaps1247;biotype=protein_coding;description=Cysteine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BQD6];external_name=CYS3;logic_name=jgi_thaps3 chr1 ensembl transcript 1038636 1039906 . - . ID=Thaps1247;Parent=Thaps1247;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1038636 1038963 . - 0 ID=Thaps1247;Parent=Thaps1247;rank=4 chr1 . exon 1038636 1038963 . - . ID=Thaps1247.4;Parent=Thaps1247;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 1039158 1039197 . - 0 ID=Thaps1247;Parent=Thaps1247;rank=3 chr1 . exon 1039158 1039197 . - . ID=Thaps1247.3;Parent=Thaps1247;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1039258 1039413 . - 0 ID=Thaps1247;Parent=Thaps1247;rank=2 chr1 . exon 1039258 1039413 . - . ID=Thaps1247.2;Parent=Thaps1247;constitutive=1;rank=2 chr1 . CDS 1039495 1039906 . - 0 ID=Thaps1247;Parent=Thaps1247;rank=1 chr1 . exon 1039495 1039906 . - . ID=Thaps1247.1;Parent=Thaps1247;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1040007 1041908 . + . ID=Thaps1248;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQD7];external_name=Thaps1248;logic_name=jgi_thaps3 chr1 ensembl transcript 1040007 1041908 . + . ID=Thaps1248;Parent=Thaps1248;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1040007 1040131 . + 0 ID=Thaps1248;Parent=Thaps1248;rank=1 chr1 . exon 1040007 1040131 . + . ID=Thaps1248.1;Parent=Thaps1248;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1040534 1041908 . + 0 ID=Thaps1248;Parent=Thaps1248;rank=2 chr1 . exon 1040534 1041908 . + . ID=Thaps1248.2;Parent=Thaps1248;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1042022 1043799 . - . ID=Thaps1249;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQD8];external_name=Thaps1249;logic_name=jgi_thaps3 chr1 ensembl transcript 1042022 1043799 . - . ID=Thaps1249;Parent=Thaps1249;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1042022 1042650 . - 0 ID=Thaps1249;Parent=Thaps1249;rank=3 chr1 . exon 1042022 1042650 . - . ID=Thaps1249.3;Parent=Thaps1249;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1042733 1042969 . - 0 ID=Thaps1249;Parent=Thaps1249;rank=2 chr1 . exon 1042733 1042969 . - . ID=Thaps1249.2;Parent=Thaps1249;constitutive=1;rank=2 chr1 . CDS 1043055 1043799 . - 0 ID=Thaps1249;Parent=Thaps1249;rank=1 chr1 . exon 1043055 1043799 . - . ID=Thaps1249.1;Parent=Thaps1249;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1044087 1047062 . + . ID=Thaps20734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQD9];external_name=Thaps20734;logic_name=jgi_thaps3 chr1 ensembl transcript 1044087 1047062 . + . ID=Thaps20734;Parent=Thaps20734;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1044087 1046296 . + 0 ID=Thaps20734;Parent=Thaps20734;rank=1 chr1 . exon 1044087 1046296 . + . ID=Thaps20734.1;Parent=Thaps20734;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1046373 1046484 . + 0 ID=Thaps20734;Parent=Thaps20734;rank=2 chr1 . exon 1046373 1046484 . + . ID=Thaps20734.2;Parent=Thaps20734;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1046570 1046625 . + 0 ID=Thaps20734;Parent=Thaps20734;rank=3 chr1 . exon 1046570 1046625 . + . ID=Thaps20734.3;Parent=Thaps20734;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1046707 1046852 . + 0 ID=Thaps20734;Parent=Thaps20734;rank=4 chr1 . exon 1046707 1046852 . + . ID=Thaps20734.4;Parent=Thaps20734;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1046950 1047062 . + 0 ID=Thaps20734;Parent=Thaps20734;rank=5 chr1 . exon 1046950 1047062 . + . ID=Thaps20734.5;Parent=Thaps20734;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . exon 1037919 1037933 . + . ID=Thaps267987.3;Parent=Thaps267987;constitutive=1;rank=3 chr1 . exon 1038031 1038346 . + . ID=Thaps267987.4;Parent=Thaps267987;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . repeat_region 1052015 1052022 . ? . description=dust chr1 . repeat_region 1052194 1052210 . ? . description=dust chr1 . repeat_region 1053097 1053115 . ? . description=dust chr1 . repeat_region 1054247 1054265 . ? . description=dust chr1 . repeat_region 1055072 1055115 . ? . description=dust chr1 ensembl tRNA_gene 1052211 1052292 . - . ID=EPrTPOG00000000004;biotype=tRNA;description=tRNA-Ser for anticodon GCU [Source:TRNASCAN_SE%3BAcc:tRNA-Ser];external_name=tRNA-Ser;logic_name=ncrna_eg chr1 ensembl transcript 1052211 1052292 . - . ID=EPrTPOT00000000007;Parent=EPrTPOG00000000004;biotype=tRNA;logic_name=ncrna_eg chr1 ensembl tRNA_gene 1051634 1051726 . - . ID=EPrTPOG00000000122;biotype=tRNA;description=tRNA-Ser for anticodon GCU [Source:TRNASCAN_SE%3BAcc:tRNA-Ser];external_name=tRNA-Ser;logic_name=ncrna_eg chr1 ensembl transcript 1051634 1051726 . - . ID=EPrTPOT00000000122;Parent=EPrTPOG00000000122;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 1052211 1052292 . - . ID=EPrTPOE00000000004;Parent=EPrTPOT00000000007;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . exon 1051634 1051726 . - . ID=EPrTPOE00000000122;Parent=EPrTPOT00000000122;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1048631 1049644 . - . ID=Thaps1252;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQE0];external_name=Thaps1252;logic_name=jgi_thaps3 chr1 ensembl transcript 1048631 1049644 . - . ID=Thaps1252;Parent=Thaps1252;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1048631 1049644 . - 0 ID=Thaps1252;Parent=Thaps1252;rank=1 chr1 . exon 1048631 1049644 . - . ID=Thaps1252.1;Parent=Thaps1252;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1052396 1053592 . + . ID=Thaps1254;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQE2];external_name=Thaps1254;logic_name=jgi_thaps3 chr1 ensembl transcript 1052396 1053592 . + . ID=Thaps1254;Parent=Thaps1254;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1052396 1052546 . + 0 ID=Thaps1254;Parent=Thaps1254;rank=1 chr1 . exon 1052396 1052546 . + . ID=Thaps1254.1;Parent=Thaps1254;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1052649 1052680 . + 0 ID=Thaps1254;Parent=Thaps1254;rank=2 chr1 . exon 1052649 1052680 . + . ID=Thaps1254.2;Parent=Thaps1254;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1053140 1053592 . + 0 ID=Thaps1254;Parent=Thaps1254;rank=3 chr1 . exon 1053140 1053592 . + . ID=Thaps1254.3;Parent=Thaps1254;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1054159 1057085 . + . ID=Thaps1255;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQE3];external_name=Thaps1255;logic_name=jgi_thaps3 chr1 ensembl transcript 1054159 1057085 . + . ID=Thaps1255;Parent=Thaps1255;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1054159 1055749 . + 0 ID=Thaps1255;Parent=Thaps1255;rank=1 chr1 . exon 1054159 1055749 . + . ID=Thaps1255.1;Parent=Thaps1255;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1055845 1055900 . + 0 ID=Thaps1255;Parent=Thaps1255;rank=2 chr1 . exon 1055845 1055900 . + . ID=Thaps1255.2;Parent=Thaps1255;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1055943 1057085 . + 0 ID=Thaps1255;Parent=Thaps1255;rank=3 chr1 . exon 1055943 1057085 . + . ID=Thaps1255.3;Parent=Thaps1255;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1050849 1051472 . + . ID=Thaps39062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQE1];external_name=Thaps39062;logic_name=jgi_thaps3 chr1 ensembl transcript 1050849 1051472 . + . ID=Thaps39062;Parent=Thaps39062;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1050849 1051127 . + 0 ID=Thaps39062;Parent=Thaps39062;rank=1 chr1 . exon 1050849 1051127 . + . ID=Thaps39062.1;Parent=Thaps39062;constitutive=1;rank=1 chr1 . CDS 1051209 1051472 . + 0 ID=Thaps39062;Parent=Thaps39062;rank=2 chr1 . exon 1051209 1051472 . + . ID=Thaps39062.2;Parent=Thaps39062;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1057800 1059478 . - . ID=Thaps20737;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQE4];external_name=Thaps20737;logic_name=jgi_thaps3 chr1 ensembl transcript 1057800 1059478 . - . ID=Thaps20737;Parent=Thaps20737;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1057800 1057823 . - 0 ID=Thaps20737;Parent=Thaps20737;rank=2 chr1 . exon 1057800 1057823 . - . ID=Thaps20737.2;Parent=Thaps20737;constitutive=1;rank=2 chr1 . CDS 1057949 1059478 . - 0 ID=Thaps20737;Parent=Thaps20737;rank=1 chr1 . exon 1057949 1059478 . - . ID=Thaps20737.1;Parent=Thaps20737;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1063308 1065675 . + . ID=Thaps20739;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQE6];external_name=Thaps20739;logic_name=jgi_thaps3 chr1 ensembl transcript 1063308 1065675 . + . ID=Thaps20739;Parent=Thaps20739;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1063308 1063805 . + 0 ID=Thaps20739;Parent=Thaps20739;rank=1 chr1 . exon 1063308 1063805 . + . ID=Thaps20739.1;Parent=Thaps20739;constitutive=1;rank=1 chr1 . CDS 1063900 1065437 . + 0 ID=Thaps20739;Parent=Thaps20739;rank=2 chr1 . exon 1063900 1065437 . + . ID=Thaps20739.2;Parent=Thaps20739;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1065522 1065675 . + 0 ID=Thaps20739;Parent=Thaps20739;rank=3 chr1 . exon 1065522 1065675 . + . ID=Thaps20739.3;Parent=Thaps20739;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 1065832 1066476 . - . ID=Thaps20740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQE7];external_name=Thaps20740;logic_name=jgi_thaps3 chr1 ensembl transcript 1065832 1066476 . - . ID=Thaps20740;Parent=Thaps20740;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1065832 1066476 . - 0 ID=Thaps20740;Parent=Thaps20740;rank=1 chr1 . exon 1065832 1066476 . - . ID=Thaps20740.1;Parent=Thaps20740;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1061947 1062913 . + . ID=Thaps260874;biotype=protein_coding;description=Pi 4-kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BQE5];external_name=Thaps260874;logic_name=jgi_thaps3 chr1 ensembl transcript 1061947 1062913 . + . ID=Thaps260874;Parent=Thaps260874;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1061947 1062453 . + 0 ID=Thaps260874;Parent=Thaps260874;rank=1 chr1 . exon 1061947 1062453 . + . ID=Thaps260874.1;Parent=Thaps260874;constitutive=1;rank=1 chr1 . CDS 1062529 1062913 . + 0 ID=Thaps260874;Parent=Thaps260874;rank=2 chr1 . exon 1062529 1062913 . + . ID=Thaps260874.2;Parent=Thaps260874;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1066956 1067423 . + . ID=Thaps31032;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQE8];external_name=Thaps31032;logic_name=jgi_thaps3 chr1 ensembl transcript 1066956 1067423 . + . ID=Thaps31032;Parent=Thaps31032;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1066956 1067423 . + 0 ID=Thaps31032;Parent=Thaps31032;rank=1 chr1 . exon 1066956 1067423 . + . ID=Thaps31032.1;Parent=Thaps31032;constitutive=1;rank=1 chr1 . repeat_region 1068914 1068921 . ? . description=dust chr1 . repeat_region 1072199 1072233 . ? . description=dust chr1 . repeat_region 1072879 1072904 . ? . description=trf chr1 . repeat_region 1072879 1072904 . ? . description=dust chr1 . repeat_region 1075419 1075426 . ? . description=dust chr1 . repeat_region 1076606 1076615 . ? . description=dust chr1 ensembl protein_coding_gene 1069252 1071333 . + . ID=Thaps20742;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQF0];external_name=Thaps20742;logic_name=jgi_thaps3 chr1 ensembl transcript 1069252 1071333 . + . ID=Thaps20742;Parent=Thaps20742;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1069252 1070612 . + 0 ID=Thaps20742;Parent=Thaps20742;rank=1 chr1 . exon 1069252 1070612 . + . ID=Thaps20742.1;Parent=Thaps20742;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1070769 1071333 . + 0 ID=Thaps20742;Parent=Thaps20742;rank=2 chr1 . exon 1070769 1071333 . + . ID=Thaps20742.2;Parent=Thaps20742;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1071476 1072939 . - . ID=Thaps20743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQF1];external_name=Thaps20743;logic_name=jgi_thaps3 chr1 ensembl transcript 1071476 1072939 . - . ID=Thaps20743;Parent=Thaps20743;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1071476 1072939 . - 0 ID=Thaps20743;Parent=Thaps20743;rank=1 chr1 . exon 1071476 1072939 . - . ID=Thaps20743.1;Parent=Thaps20743;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1075310 1077959 . - . ID=Thaps20745;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQF3];external_name=Thaps20745;logic_name=jgi_thaps3 chr1 ensembl transcript 1075310 1077959 . - . ID=Thaps20745;Parent=Thaps20745;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1075310 1076586 . - 0 ID=Thaps20745;Parent=Thaps20745;rank=2 chr1 . exon 1075310 1076586 . - . ID=Thaps20745.2;Parent=Thaps20745;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1076687 1077959 . - 0 ID=Thaps20745;Parent=Thaps20745;rank=1 chr1 . exon 1076687 1077959 . - . ID=Thaps20745.1;Parent=Thaps20745;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1067766 1068575 . - . ID=Thaps260875;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQE9];external_name=Thaps260875;logic_name=jgi_thaps3 chr1 ensembl transcript 1067766 1068575 . - . ID=Thaps260875;Parent=Thaps260875;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1067766 1068575 . - 0 ID=Thaps260875;Parent=Thaps260875;rank=1 chr1 . exon 1067766 1068575 . - . ID=Thaps260875.1;Parent=Thaps260875;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1073789 1075066 . + . ID=Thaps31226;biotype=protein_coding;description=Transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BQF2];external_name=Thaps31226;logic_name=jgi_thaps3 chr1 ensembl transcript 1073789 1075066 . + . ID=Thaps31226;Parent=Thaps31226;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1073789 1075066 . + 0 ID=Thaps31226;Parent=Thaps31226;rank=1 chr1 . exon 1073789 1075066 . + . ID=Thaps31226.1;Parent=Thaps31226;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1084806 1088576 . - . ID=Thaps1268;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQF6];external_name=Thaps1268;logic_name=jgi_thaps3 chr1 ensembl transcript 1084806 1088576 . - . ID=Thaps1268;Parent=Thaps1268;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1084806 1088576 . - 0 ID=Thaps1268;Parent=Thaps1268;rank=1 chr1 . exon 1084806 1088576 . - . ID=Thaps1268.1;Parent=Thaps1268;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1078339 1081263 . + . ID=Thaps20746;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQF4];external_name=Thaps20746;logic_name=jgi_thaps3 chr1 ensembl transcript 1078339 1081263 . + . ID=Thaps20746;Parent=Thaps20746;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1078339 1081263 . + 0 ID=Thaps20746;Parent=Thaps20746;rank=1 chr1 . exon 1078339 1081263 . + . ID=Thaps20746.1;Parent=Thaps20746;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1081729 1084362 . + . ID=Thaps20747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQF5];external_name=Thaps20747;logic_name=jgi_thaps3 chr1 ensembl transcript 1081729 1084362 . + . ID=Thaps20747;Parent=Thaps20747;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1081729 1084362 . + 0 ID=Thaps20747;Parent=Thaps20747;rank=1 chr1 . exon 1081729 1084362 . + . ID=Thaps20747.1;Parent=Thaps20747;constitutive=1;rank=1 chr1 . repeat_region 1089434 1089457 . ? . description=trf chr1 . repeat_region 1089434 1089457 . ? . description=dust chr1 . repeat_region 1092500 1092520 . ? . description=dust chr1 ensembl protein_coding_gene 1094109 1095683 . + . ID=Thaps20750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQF9];external_name=Thaps20750;logic_name=jgi_thaps3 chr1 ensembl transcript 1094109 1095683 . + . ID=Thaps20750;Parent=Thaps20750;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1094109 1095683 . + 0 ID=Thaps20750;Parent=Thaps20750;rank=1 chr1 . exon 1094109 1095683 . + . ID=Thaps20750.1;Parent=Thaps20750;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1096238 1099654 . + . ID=Thaps20751;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG0];external_name=Thaps20751;logic_name=jgi_thaps3 chr1 ensembl transcript 1096238 1099654 . + . ID=Thaps20751;Parent=Thaps20751;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1096238 1099654 . + 0 ID=Thaps20751;Parent=Thaps20751;rank=1 chr1 . exon 1096238 1099654 . + . ID=Thaps20751.1;Parent=Thaps20751;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1092497 1093546 . - . ID=Thaps31047;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQF8];external_name=Thaps31047;logic_name=jgi_thaps3 chr1 ensembl transcript 1092497 1093546 . - . ID=Thaps31047;Parent=Thaps31047;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1092497 1093012 . - 0 ID=Thaps31047;Parent=Thaps31047;rank=2 chr1 . exon 1092497 1093012 . - . ID=Thaps31047.2;Parent=Thaps31047;constitutive=1;rank=2 chr1 . CDS 1093088 1093546 . - 0 ID=Thaps31047;Parent=Thaps31047;rank=1 chr1 . exon 1093088 1093546 . - . ID=Thaps31047.1;Parent=Thaps31047;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1091297 1092232 . + . ID=Thaps31136;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQF7];external_name=Thaps31136;logic_name=jgi_thaps3 chr1 ensembl transcript 1091297 1092232 . + . ID=Thaps31136;Parent=Thaps31136;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1091297 1091597 . + 0 ID=Thaps31136;Parent=Thaps31136;rank=1 chr1 . exon 1091297 1091597 . + . ID=Thaps31136.1;Parent=Thaps31136;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1091724 1092232 . + 0 ID=Thaps31136;Parent=Thaps31136;rank=2 chr1 . exon 1091724 1092232 . + . ID=Thaps31136.2;Parent=Thaps31136;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1101587 1102021 . - . ID=Thaps1274;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG2];external_name=Thaps1274;logic_name=jgi_thaps3 chr1 ensembl transcript 1101587 1102021 . - . ID=Thaps1274;Parent=Thaps1274;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1101587 1102021 . - 0 ID=Thaps1274;Parent=Thaps1274;rank=1 chr1 . exon 1101587 1102021 . - . ID=Thaps1274.1;Parent=Thaps1274;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1102295 1103596 . - . ID=Thaps1275;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG3];external_name=Thaps1275;logic_name=jgi_thaps3 chr1 ensembl transcript 1102295 1103596 . - . ID=Thaps1275;Parent=Thaps1275;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1102295 1103596 . - 0 ID=Thaps1275;Parent=Thaps1275;rank=1 chr1 . exon 1102295 1103596 . - . ID=Thaps1275.1;Parent=Thaps1275;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1100593 1101294 . + . ID=Thaps20752;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG1];external_name=Thaps20752;logic_name=jgi_thaps3 chr1 ensembl transcript 1100593 1101294 . + . ID=Thaps20752;Parent=Thaps20752;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1100593 1101294 . + 0 ID=Thaps20752;Parent=Thaps20752;rank=1 chr1 . exon 1100593 1101294 . + . ID=Thaps20752.1;Parent=Thaps20752;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1104257 1107518 . + . ID=Thaps20753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG4];external_name=Thaps20753;logic_name=jgi_thaps3 chr1 ensembl transcript 1104257 1107518 . + . ID=Thaps20753;Parent=Thaps20753;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1104257 1107189 . + 0 ID=Thaps20753;Parent=Thaps20753;rank=1 chr1 . exon 1104257 1107189 . + . ID=Thaps20753.1;Parent=Thaps20753;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1107284 1107518 . + 0 ID=Thaps20753;Parent=Thaps20753;rank=2 chr1 . exon 1107284 1107518 . + . ID=Thaps20753.2;Parent=Thaps20753;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . repeat_region 1108093 1108151 . ? . description=dust chr1 . repeat_region 1115269 1115294 . ? . description=trf chr1 . repeat_region 1115269 1115294 . ? . description=dust chr1 ensembl protein_coding_gene 1108192 1113067 . + . ID=Thaps20754;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG5];external_name=Thaps20754;logic_name=jgi_thaps3 chr1 ensembl transcript 1108192 1113067 . + . ID=Thaps20754;Parent=Thaps20754;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1108192 1111989 . + 0 ID=Thaps20754;Parent=Thaps20754;rank=1 chr1 . exon 1108192 1111989 . + . ID=Thaps20754.1;Parent=Thaps20754;constitutive=1;rank=1 chr1 . CDS 1112090 1113067 . + 0 ID=Thaps20754;Parent=Thaps20754;rank=2 chr1 . exon 1112090 1113067 . + . ID=Thaps20754.2;Parent=Thaps20754;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1116935 1117142 . + . ID=Thaps260879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG7];external_name=Thaps260879;logic_name=jgi_thaps3 chr1 ensembl transcript 1116935 1117142 . + . ID=Thaps260879;Parent=Thaps260879;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1116935 1117142 . + 0 ID=Thaps260879;Parent=Thaps260879;rank=1 chr1 . exon 1116935 1117142 . + . ID=Thaps260879.1;Parent=Thaps260879;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1117169 1117338 . + . ID=Thaps260880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG8];external_name=Thaps260880;logic_name=jgi_thaps3 chr1 ensembl transcript 1117169 1117338 . + . ID=Thaps260880;Parent=Thaps260880;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1117169 1117338 . + 0 ID=Thaps260880;Parent=Thaps260880;rank=1 chr1 . exon 1117169 1117338 . + . ID=Thaps260880.1;Parent=Thaps260880;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1113284 1114476 . - . ID=Thaps31003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG6];external_name=Thaps31003;logic_name=jgi_thaps3 chr1 ensembl transcript 1113284 1114476 . - . ID=Thaps31003;Parent=Thaps31003;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1113284 1113594 . - 0 ID=Thaps31003;Parent=Thaps31003;rank=2 chr1 . exon 1113284 1113594 . - . ID=Thaps31003.2;Parent=Thaps31003;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1113720 1114476 . - 0 ID=Thaps31003;Parent=Thaps31003;rank=1 chr1 . exon 1113720 1114476 . - . ID=Thaps31003.1;Parent=Thaps31003;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1117912 1121093 . - . ID=Thaps1280;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQG9];external_name=Thaps1280;logic_name=jgi_thaps3 chr1 ensembl transcript 1117912 1121093 . - . ID=Thaps1280;Parent=Thaps1280;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1117912 1119839 . - 0 ID=Thaps1280;Parent=Thaps1280;rank=4 chr1 . exon 1117912 1119839 . - . ID=Thaps1280.4;Parent=Thaps1280;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1119996 1120062 . - 0 ID=Thaps1280;Parent=Thaps1280;rank=3 chr1 . exon 1119996 1120062 . - . ID=Thaps1280.3;Parent=Thaps1280;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1120174 1120691 . - 0 ID=Thaps1280;Parent=Thaps1280;rank=2 chr1 . exon 1120174 1120691 . - . ID=Thaps1280.2;Parent=Thaps1280;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1120778 1121093 . - 0 ID=Thaps1280;Parent=Thaps1280;rank=1 chr1 . exon 1120778 1121093 . - . ID=Thaps1280.1;Parent=Thaps1280;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1122834 1125238 . + . ID=Thaps267997;biotype=protein_coding;description=Rad54-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQH0];external_name=RAD54;logic_name=jgi_thaps3 chr1 ensembl transcript 1122834 1125238 . + . ID=Thaps267997;Parent=Thaps267997;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1122834 1123021 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=1 chr1 . exon 1122834 1123021 . + . ID=Thaps267997.1;Parent=Thaps267997;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1123106 1123275 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=2 chr1 . exon 1123106 1123275 . + . ID=Thaps267997.2;Parent=Thaps267997;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1123375 1123524 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=3 chr1 . exon 1123375 1123524 . + . ID=Thaps267997.3;Parent=Thaps267997;constitutive=1;rank=3 chr1 . CDS 1123603 1123676 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=4 chr1 . exon 1123603 1123676 . + . ID=Thaps267997.4;Parent=Thaps267997;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1123756 1123854 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=5 chr1 . exon 1123756 1123854 . + . ID=Thaps267997.5;Parent=Thaps267997;constitutive=1;rank=5 chr1 . CDS 1123971 1124098 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=6 chr1 . exon 1123971 1124098 . + . ID=Thaps267997.6;Parent=Thaps267997;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 1124168 1124261 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=7 chr1 . exon 1124168 1124261 . + . ID=Thaps267997.7;Parent=Thaps267997;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 1124338 1124687 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=8 chr1 . exon 1124338 1124687 . + . ID=Thaps267997.8;Parent=Thaps267997;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . CDS 1124767 1124848 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=9 chr1 . exon 1124767 1124848 . + . ID=Thaps267997.9;Parent=Thaps267997;constitutive=1;ensembl_end_phase=1;rank=9 chr1 . CDS 1124927 1125238 . + 0 ID=Thaps267997;Parent=Thaps267997;rank=10 chr1 . exon 1124927 1125238 . + . ID=Thaps267997.10;Parent=Thaps267997;constitutive=1;rank=10 chr1 ensembl protein_coding_gene 1126080 1127057 . - . ID=Thaps31551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQH1];external_name=Thaps31551;logic_name=jgi_thaps3 chr1 ensembl transcript 1126080 1127057 . - . ID=Thaps31551;Parent=Thaps31551;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1126080 1127057 . - 0 ID=Thaps31551;Parent=Thaps31551;rank=1 chr1 . exon 1126080 1127057 . - . ID=Thaps31551.1;Parent=Thaps31551;constitutive=1;rank=1 chr1 . repeat_region 1129261 1129274 . ? . description=dust chr1 ensembl protein_coding_gene 1129381 1130881 . + . ID=Thaps1283;biotype=protein_coding;description=Queuine tRNA-ribosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQH2];external_name=MTS2_1;logic_name=jgi_thaps3 chr1 ensembl transcript 1129381 1130881 . + . ID=Thaps1283;Parent=Thaps1283;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1129381 1129629 . + 0 ID=Thaps1283;Parent=Thaps1283;rank=1 chr1 . exon 1129381 1129629 . + . ID=Thaps1283.1;Parent=Thaps1283;constitutive=1;rank=1 chr1 . CDS 1129700 1130881 . + 0 ID=Thaps1283;Parent=Thaps1283;rank=2 chr1 . exon 1129700 1130881 . + . ID=Thaps1283.2;Parent=Thaps1283;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1133593 1134399 . + . ID=Thaps25918;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQH4];external_name=Thaps25918;logic_name=jgi_thaps3 chr1 ensembl transcript 1133593 1134399 . + . ID=Thaps25918;Parent=Thaps25918;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1133593 1134399 . + 0 ID=Thaps25918;Parent=Thaps25918;rank=1 chr1 . exon 1133593 1134399 . + . ID=Thaps25918.1;Parent=Thaps25918;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1134916 1135932 . - . ID=Thaps31126;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQH5];external_name=Thaps31126;logic_name=jgi_thaps3 chr1 ensembl transcript 1134916 1135932 . - . ID=Thaps31126;Parent=Thaps31126;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1134916 1135932 . - 0 ID=Thaps31126;Parent=Thaps31126;rank=1 chr1 . exon 1134916 1135932 . - . ID=Thaps31126.1;Parent=Thaps31126;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1131044 1132753 . - . ID=Thaps39075;biotype=protein_coding;description=Amidophosphoribosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQH3];external_name=Thaps39075;logic_name=jgi_thaps3 chr1 ensembl transcript 1131044 1132753 . - . ID=Thaps39075;Parent=Thaps39075;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1131044 1131246 . - 0 ID=Thaps39075;Parent=Thaps39075;rank=2 chr1 . exon 1131044 1131246 . - . ID=Thaps39075.2;Parent=Thaps39075;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1131343 1132753 . - 0 ID=Thaps39075;Parent=Thaps39075;rank=1 chr1 . exon 1131343 1132753 . - . ID=Thaps39075.1;Parent=Thaps39075;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1139285 1140903 . + . ID=Thaps1288;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQH7];external_name=Thaps1288;logic_name=jgi_thaps3 chr1 ensembl transcript 1139285 1140903 . + . ID=Thaps1288;Parent=Thaps1288;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1139285 1139690 . + 0 ID=Thaps1288;Parent=Thaps1288;rank=1 chr1 . exon 1139285 1139690 . + . ID=Thaps1288.1;Parent=Thaps1288;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1139768 1140903 . + 0 ID=Thaps1288;Parent=Thaps1288;rank=2 chr1 . exon 1139768 1140903 . + . ID=Thaps1288.2;Parent=Thaps1288;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1146565 1147578 . + . ID=Thaps1291;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQI0];external_name=Thaps1291;logic_name=jgi_thaps3 chr1 ensembl transcript 1146565 1147578 . + . ID=Thaps1291;Parent=Thaps1291;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1146565 1147578 . + 0 ID=Thaps1291;Parent=Thaps1291;rank=1 chr1 . exon 1146565 1147578 . + . ID=Thaps1291.1;Parent=Thaps1291;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1143867 1144022 . - . ID=Thaps20504;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQH8];external_name=Thaps20504;logic_name=jgi_thaps3 chr1 ensembl transcript 1143867 1144022 . - . ID=Thaps20504;Parent=Thaps20504;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1143867 1144022 . - 0 ID=Thaps20504;Parent=Thaps20504;rank=1 chr1 . exon 1143867 1144022 . - . ID=Thaps20504.1;Parent=Thaps20504;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1137577 1138560 . - . ID=Thaps260885;biotype=protein_coding;description=Prephenate dehydratase [Source:UniProtKB/TrEMBL%3BAcc:B8BQH6];external_name=Thaps260885;logic_name=jgi_thaps3 chr1 ensembl transcript 1137577 1138560 . - . ID=Thaps260885;Parent=Thaps260885;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1137577 1137746 . - 0 ID=Thaps260885;Parent=Thaps260885;rank=2 chr1 . exon 1137577 1137746 . - . ID=Thaps260885.2;Parent=Thaps260885;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1137810 1138560 . - 0 ID=Thaps260885;Parent=Thaps260885;rank=1 chr1 . exon 1137810 1138560 . - . ID=Thaps260885.1;Parent=Thaps260885;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1145652 1146296 . + . ID=Thaps260886;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQH9];external_name=Thaps260886;logic_name=jgi_thaps3 chr1 ensembl transcript 1145652 1146296 . + . ID=Thaps260886;Parent=Thaps260886;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1145652 1145903 . + 0 ID=Thaps260886;Parent=Thaps260886;rank=1 chr1 . exon 1145652 1145903 . + . ID=Thaps260886.1;Parent=Thaps260886;constitutive=1;rank=1 chr1 . CDS 1146078 1146296 . + 0 ID=Thaps260886;Parent=Thaps260886;rank=2 chr1 . exon 1146078 1146296 . + . ID=Thaps260886.2;Parent=Thaps260886;constitutive=1;rank=2 chr1 . repeat_region 1151336 1151364 . ? . description=dust chr1 . repeat_region 1155819 1155847 . ? . description=trf chr1 . repeat_region 1156529 1156572 . ? . description=trf chr1 ensembl protein_coding_gene 1151094 1151396 . + . ID=Thaps1294;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQI3];external_name=Thaps1294;logic_name=jgi_thaps3 chr1 ensembl transcript 1151094 1151396 . + . ID=Thaps1294;Parent=Thaps1294;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1151094 1151396 . + 0 ID=Thaps1294;Parent=Thaps1294;rank=1 chr1 . exon 1151094 1151396 . + . ID=Thaps1294.1;Parent=Thaps1294;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1156061 1157459 . + . ID=Thaps20763;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQI6];external_name=Thaps20763;logic_name=jgi_thaps3 chr1 ensembl transcript 1156061 1157459 . + . ID=Thaps20763;Parent=Thaps20763;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1156061 1156245 . + 0 ID=Thaps20763;Parent=Thaps20763;rank=1 chr1 . exon 1156061 1156245 . + . ID=Thaps20763.1;Parent=Thaps20763;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1156574 1157459 . + 0 ID=Thaps20763;Parent=Thaps20763;rank=2 chr1 . exon 1156574 1157459 . + . ID=Thaps20763.2;Parent=Thaps20763;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1153558 1155759 . - . ID=Thaps260890;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQI5];external_name=Thaps260890;logic_name=jgi_thaps3 chr1 ensembl transcript 1153558 1155759 . - . ID=Thaps260890;Parent=Thaps260890;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1153558 1154580 . - 0 ID=Thaps260890;Parent=Thaps260890;rank=3 chr1 . exon 1153558 1154580 . - . ID=Thaps260890.3;Parent=Thaps260890;constitutive=1;rank=3 chr1 . CDS 1154869 1155053 . - 0 ID=Thaps260890;Parent=Thaps260890;rank=2 chr1 . exon 1154869 1155053 . - . ID=Thaps260890.2;Parent=Thaps260890;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1155312 1155759 . - 0 ID=Thaps260890;Parent=Thaps260890;rank=1 chr1 . exon 1155312 1155759 . - . ID=Thaps260890.1;Parent=Thaps260890;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1147680 1148967 . - . ID=Thaps26635;biotype=protein_coding;description=Amino acid/polyamine transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BQI1];external_name=Thaps26635;logic_name=jgi_thaps3 chr1 ensembl transcript 1147680 1148967 . - . ID=Thaps26635;Parent=Thaps26635;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1147680 1148419 . - 0 ID=Thaps26635;Parent=Thaps26635;rank=2 chr1 . exon 1147680 1148419 . - . ID=Thaps26635.2;Parent=Thaps26635;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1148505 1148967 . - 0 ID=Thaps26635;Parent=Thaps26635;rank=1 chr1 . exon 1148505 1148967 . - . ID=Thaps26635.1;Parent=Thaps26635;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1149571 1150608 . - . ID=Thaps31465;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQI2];external_name=Thaps31465;logic_name=jgi_thaps3 chr1 ensembl transcript 1149571 1150608 . - . ID=Thaps31465;Parent=Thaps31465;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1149571 1149738 . - 0 ID=Thaps31465;Parent=Thaps31465;rank=2 chr1 . exon 1149571 1149738 . - . ID=Thaps31465.2;Parent=Thaps31465;constitutive=1;rank=2 chr1 . CDS 1149877 1150608 . - 0 ID=Thaps31465;Parent=Thaps31465;rank=1 chr1 . exon 1149877 1150608 . - . ID=Thaps31465.1;Parent=Thaps31465;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1152208 1153131 . - . ID=Thaps31636;biotype=protein_coding;description=Aldose-1-epimerase [Source:UniProtKB/TrEMBL%3BAcc:B8BQI4];external_name=Thaps31636;logic_name=jgi_thaps3 chr1 ensembl transcript 1152208 1153131 . - . ID=Thaps31636;Parent=Thaps31636;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1152208 1152384 . - 0 ID=Thaps31636;Parent=Thaps31636;rank=2 chr1 . exon 1152208 1152384 . - . ID=Thaps31636.2;Parent=Thaps31636;constitutive=1;rank=2 chr1 . CDS 1152469 1153131 . - 0 ID=Thaps31636;Parent=Thaps31636;rank=1 chr1 . exon 1152469 1153131 . - . ID=Thaps31636.1;Parent=Thaps31636;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1157677 1158279 . - . ID=Thaps15417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQI7];external_name=Thaps15417;logic_name=jgi_thaps3 chr1 ensembl transcript 1157677 1158279 . - . ID=Thaps15417;Parent=Thaps15417;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1157677 1158279 . - 0 ID=Thaps15417;Parent=Thaps15417;rank=1 chr1 . exon 1157677 1158279 . - . ID=Thaps15417.1;Parent=Thaps15417;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1165502 1167051 . + . ID=Thaps181;biotype=protein_coding;description=N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ0];external_name=Thaps181;logic_name=jgi_thaps3 chr1 ensembl transcript 1165502 1167051 . + . ID=Thaps181;Parent=Thaps181;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1165502 1165619 . + 0 ID=Thaps181;Parent=Thaps181;rank=1 chr1 . exon 1165502 1165619 . + . ID=Thaps181.1;Parent=Thaps181;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1165659 1165957 . + 0 ID=Thaps181;Parent=Thaps181;rank=2 chr1 . exon 1165659 1165957 . + . ID=Thaps181.2;Parent=Thaps181;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1166033 1166202 . + 0 ID=Thaps181;Parent=Thaps181;rank=3 chr1 . exon 1166033 1166202 . + . ID=Thaps181.3;Parent=Thaps181;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1166286 1167051 . + 0 ID=Thaps181;Parent=Thaps181;rank=4 chr1 . exon 1166286 1167051 . + . ID=Thaps181.4;Parent=Thaps181;constitutive=1;ensembl_end_phase=1;rank=4 chr1 ensembl protein_coding_gene 1160661 1162482 . + . ID=Thaps260891;biotype=protein_coding;description=Small nuclear ribonucleoprotein prp4 [Source:UniProtKB/TrEMBL%3BAcc:B8BQI8];external_name=Thaps260891;logic_name=jgi_thaps3 chr1 ensembl transcript 1160661 1162482 . + . ID=Thaps260891;Parent=Thaps260891;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1160661 1160942 . + 0 ID=Thaps260891;Parent=Thaps260891;rank=1 chr1 . exon 1160661 1160942 . + . ID=Thaps260891.1;Parent=Thaps260891;constitutive=1;rank=1 chr1 . CDS 1160973 1161114 . + 0 ID=Thaps260891;Parent=Thaps260891;rank=2 chr1 . exon 1160973 1161114 . + . ID=Thaps260891.2;Parent=Thaps260891;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1161232 1161345 . + 0 ID=Thaps260891;Parent=Thaps260891;rank=3 chr1 . exon 1161232 1161345 . + . ID=Thaps260891.3;Parent=Thaps260891;constitutive=1;rank=3 chr1 . CDS 1161385 1161537 . + 0 ID=Thaps260891;Parent=Thaps260891;rank=4 chr1 . exon 1161385 1161537 . + . ID=Thaps260891.4;Parent=Thaps260891;constitutive=1;rank=4 chr1 . CDS 1161613 1161665 . + 0 ID=Thaps260891;Parent=Thaps260891;rank=5 chr1 . exon 1161613 1161665 . + . ID=Thaps260891.5;Parent=Thaps260891;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 1161759 1162043 . + 0 ID=Thaps260891;Parent=Thaps260891;rank=6 chr1 . exon 1161759 1162043 . + . ID=Thaps260891.6;Parent=Thaps260891;constitutive=1;rank=6 chr1 . CDS 1162123 1162482 . + 0 ID=Thaps260891;Parent=Thaps260891;rank=7 chr1 . exon 1162123 1162482 . + . ID=Thaps260891.7;Parent=Thaps260891;constitutive=1;rank=7 chr1 ensembl protein_coding_gene 1167127 1168008 . - . ID=Thaps268003;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ1];external_name=Thaps268003;logic_name=jgi_thaps3 chr1 ensembl transcript 1167127 1168008 . - . ID=Thaps268003;Parent=Thaps268003;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1167127 1168008 . - 0 ID=Thaps268003;Parent=Thaps268003;rank=1 chr1 . exon 1167127 1168008 . - . ID=Thaps268003.1;Parent=Thaps268003;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1163942 1165030 . - . ID=Thaps31011;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQI9];external_name=Thaps31011;logic_name=jgi_thaps3 chr1 ensembl transcript 1163942 1165030 . - . ID=Thaps31011;Parent=Thaps31011;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1163942 1164735 . - 0 ID=Thaps31011;Parent=Thaps31011;rank=2 chr1 . exon 1163942 1164735 . - . ID=Thaps31011.2;Parent=Thaps31011;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1164946 1165030 . - 0 ID=Thaps31011;Parent=Thaps31011;rank=1 chr1 . exon 1164946 1165030 . - . ID=Thaps31011.1;Parent=Thaps31011;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 1167882 1167907 . ? . description=trf chr1 . repeat_region 1167882 1167907 . ? . description=dust chr1 . repeat_region 1170743 1170754 . ? . description=dust chr1 ensembl protein_coding_gene 1168380 1169493 . + . ID=Thaps1302;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ2];external_name=Thaps1302;logic_name=jgi_thaps3 chr1 ensembl transcript 1168380 1169493 . + . ID=Thaps1302;Parent=Thaps1302;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1168380 1168431 . + 0 ID=Thaps1302;Parent=Thaps1302;rank=1 chr1 . exon 1168380 1168431 . + . ID=Thaps1302.1;Parent=Thaps1302;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1168483 1168556 . + 0 ID=Thaps1302;Parent=Thaps1302;rank=2 chr1 . exon 1168483 1168556 . + . ID=Thaps1302.2;Parent=Thaps1302;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1168642 1169493 . + 0 ID=Thaps1302;Parent=Thaps1302;rank=3 chr1 . exon 1168642 1169493 . + . ID=Thaps1302.3;Parent=Thaps1302;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1170865 1174327 . + . ID=Thaps1303;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ4];external_name=Thaps1303;logic_name=jgi_thaps3 chr1 ensembl transcript 1170865 1174327 . + . ID=Thaps1303;Parent=Thaps1303;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1170865 1173859 . + 0 ID=Thaps1303;Parent=Thaps1303;rank=1 chr1 . exon 1170865 1173859 . + . ID=Thaps1303.1;Parent=Thaps1303;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1173942 1174327 . + 0 ID=Thaps1303;Parent=Thaps1303;rank=2 chr1 . exon 1173942 1174327 . + . ID=Thaps1303.2;Parent=Thaps1303;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1176692 1177929 . - . ID=Thaps1305;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ6];external_name=Thaps1305;logic_name=jgi_thaps3 chr1 ensembl transcript 1176692 1177929 . - . ID=Thaps1305;Parent=Thaps1305;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1176692 1177082 . - 0 ID=Thaps1305;Parent=Thaps1305;rank=2 chr1 . exon 1176692 1177082 . - . ID=Thaps1305.2;Parent=Thaps1305;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1177157 1177929 . - 0 ID=Thaps1305;Parent=Thaps1305;rank=1 chr1 . exon 1177157 1177929 . - . ID=Thaps1305.1;Parent=Thaps1305;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1174417 1176348 . - . ID=Thaps20766;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ5];external_name=Thaps20766;logic_name=jgi_thaps3 chr1 ensembl transcript 1174417 1176348 . - . ID=Thaps20766;Parent=Thaps20766;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1174417 1176348 . - 0 ID=Thaps20766;Parent=Thaps20766;rank=1 chr1 . exon 1174417 1176348 . - . ID=Thaps20766.1;Parent=Thaps20766;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1169739 1170273 . - . ID=Thaps31091;biotype=protein_coding;description=Nucleoside diphosphate kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ3];external_name=NDK3;logic_name=jgi_thaps3 chr1 ensembl transcript 1169739 1170273 . - . ID=Thaps31091;Parent=Thaps31091;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1169739 1169982 . - 0 ID=Thaps31091;Parent=Thaps31091;rank=2 chr1 . exon 1169739 1169982 . - . ID=Thaps31091.2;Parent=Thaps31091;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1170062 1170273 . - 0 ID=Thaps31091;Parent=Thaps31091;rank=1 chr1 . exon 1170062 1170273 . - . ID=Thaps31091.1;Parent=Thaps31091;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1182782 1184421 . - . ID=Thaps1308;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ9];external_name=Thaps1308;logic_name=jgi_thaps3 chr1 ensembl transcript 1182782 1184421 . - . ID=Thaps1308;Parent=Thaps1308;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1182782 1183295 . - 0 ID=Thaps1308;Parent=Thaps1308;rank=5 chr1 . exon 1182782 1183295 . - . ID=Thaps1308.5;Parent=Thaps1308;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 1183401 1183426 . - 0 ID=Thaps1308;Parent=Thaps1308;rank=4 chr1 . exon 1183401 1183426 . - . ID=Thaps1308.4;Parent=Thaps1308;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1183508 1183684 . - 0 ID=Thaps1308;Parent=Thaps1308;rank=3 chr1 . exon 1183508 1183684 . - . ID=Thaps1308.3;Parent=Thaps1308;constitutive=1;rank=3 chr1 . CDS 1183779 1184039 . - 0 ID=Thaps1308;Parent=Thaps1308;rank=2 chr1 . exon 1183779 1184039 . - . ID=Thaps1308.2;Parent=Thaps1308;constitutive=1;rank=2 chr1 . CDS 1184131 1184421 . - 0 ID=Thaps1308;Parent=Thaps1308;rank=1 chr1 . exon 1184131 1184421 . - . ID=Thaps1308.1;Parent=Thaps1308;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1184652 1186376 . + . ID=Thaps1309;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQK0];external_name=Thaps1309;logic_name=jgi_thaps3 chr1 ensembl transcript 1184652 1186376 . + . ID=Thaps1309;Parent=Thaps1309;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1184652 1185150 . + 0 ID=Thaps1309;Parent=Thaps1309;rank=1 chr1 . exon 1184652 1185150 . + . ID=Thaps1309.1;Parent=Thaps1309;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1185247 1185990 . + 0 ID=Thaps1309;Parent=Thaps1309;rank=2 chr1 . exon 1185247 1185990 . + . ID=Thaps1309.2;Parent=Thaps1309;constitutive=1;rank=2 chr1 . CDS 1186090 1186376 . + 0 ID=Thaps1309;Parent=Thaps1309;rank=3 chr1 . exon 1186090 1186376 . + . ID=Thaps1309.3;Parent=Thaps1309;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1186726 1187942 . + . ID=Thaps1310;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQK1];external_name=Thaps1310;logic_name=jgi_thaps3 chr1 ensembl transcript 1186726 1187942 . + . ID=Thaps1310;Parent=Thaps1310;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1186726 1186765 . + 0 ID=Thaps1310;Parent=Thaps1310;rank=1 chr1 . exon 1186726 1186765 . + . ID=Thaps1310.1;Parent=Thaps1310;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1186852 1187942 . + 0 ID=Thaps1310;Parent=Thaps1310;rank=2 chr1 . exon 1186852 1187942 . + . ID=Thaps1310.2;Parent=Thaps1310;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1181419 1182531 . + . ID=Thaps30963;biotype=protein_coding;description=cAMP dependent protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ8];external_name=PKA;logic_name=jgi_thaps3 chr1 ensembl transcript 1181419 1182531 . + . ID=Thaps30963;Parent=Thaps30963;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1181419 1181823 . + 0 ID=Thaps30963;Parent=Thaps30963;rank=1 chr1 . exon 1181419 1181823 . + . ID=Thaps30963.1;Parent=Thaps30963;constitutive=1;rank=1 chr1 . CDS 1181894 1181999 . + 0 ID=Thaps30963;Parent=Thaps30963;rank=2 chr1 . exon 1181894 1181999 . + . ID=Thaps30963.2;Parent=Thaps30963;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1182092 1182531 . + 0 ID=Thaps30963;Parent=Thaps30963;rank=3 chr1 . exon 1182092 1182531 . + . ID=Thaps30963.3;Parent=Thaps30963;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1178954 1179265 . - . ID=Thaps31515;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQJ7];external_name=Thaps31515;logic_name=jgi_thaps3 chr1 ensembl transcript 1178954 1179265 . - . ID=Thaps31515;Parent=Thaps31515;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1178954 1179265 . - 0 ID=Thaps31515;Parent=Thaps31515;rank=1 chr1 . exon 1178954 1179265 . - . ID=Thaps31515.1;Parent=Thaps31515;constitutive=1;rank=1 chr1 . repeat_region 1191854 1191862 . ? . description=dust chr1 ensembl protein_coding_gene 1188051 1190377 . - . ID=Thaps1311;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQK2];external_name=Thaps1311;logic_name=jgi_thaps3 chr1 ensembl transcript 1188051 1190377 . - . ID=Thaps1311;Parent=Thaps1311;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1188051 1189087 . - 0 ID=Thaps1311;Parent=Thaps1311;rank=4 chr1 . exon 1188051 1189087 . - . ID=Thaps1311.4;Parent=Thaps1311;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1189188 1189802 . - 0 ID=Thaps1311;Parent=Thaps1311;rank=3 chr1 . exon 1189188 1189802 . - . ID=Thaps1311.3;Parent=Thaps1311;constitutive=1;rank=3 chr1 . CDS 1189925 1190229 . - 0 ID=Thaps1311;Parent=Thaps1311;rank=2 chr1 . exon 1189925 1190229 . - . ID=Thaps1311.2;Parent=Thaps1311;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1190322 1190377 . - 0 ID=Thaps1311;Parent=Thaps1311;rank=1 chr1 . exon 1190322 1190377 . - . ID=Thaps1311.1;Parent=Thaps1311;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1193136 1194718 . - . ID=Thaps20768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQK5];external_name=Thaps20768;logic_name=jgi_thaps3 chr1 ensembl transcript 1193136 1194718 . - . ID=Thaps20768;Parent=Thaps20768;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1193136 1193283 . - 0 ID=Thaps20768;Parent=Thaps20768;rank=8 chr1 . exon 1193136 1193283 . - . ID=Thaps20768.8;Parent=Thaps20768;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . CDS 1193374 1193399 . - 0 ID=Thaps20768;Parent=Thaps20768;rank=7 chr1 . exon 1193374 1193399 . - . ID=Thaps20768.7;Parent=Thaps20768;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 1193499 1193656 . - 0 ID=Thaps20768;Parent=Thaps20768;rank=6 chr1 . exon 1193499 1193656 . - . ID=Thaps20768.6;Parent=Thaps20768;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 1193742 1193872 . - 0 ID=Thaps20768;Parent=Thaps20768;rank=5 chr1 . exon 1193742 1193872 . - . ID=Thaps20768.5;Parent=Thaps20768;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 1193964 1193971 . - 0 ID=Thaps20768;Parent=Thaps20768;rank=4 chr1 . exon 1193964 1193971 . - . ID=Thaps20768.4;Parent=Thaps20768;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1194069 1194082 . - 0 ID=Thaps20768;Parent=Thaps20768;rank=3 chr1 . exon 1194069 1194082 . - . ID=Thaps20768.3;Parent=Thaps20768;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1194169 1194375 . - 0 ID=Thaps20768;Parent=Thaps20768;rank=2 chr1 . exon 1194169 1194375 . - . ID=Thaps20768.2;Parent=Thaps20768;constitutive=1;rank=2 chr1 . CDS 1194481 1194718 . - 0 ID=Thaps20768;Parent=Thaps20768;rank=1 chr1 . exon 1194481 1194718 . - . ID=Thaps20768.1;Parent=Thaps20768;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1195103 1197058 . + . ID=Thaps20769;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQK6];external_name=Thaps20769;logic_name=jgi_thaps3 chr1 ensembl transcript 1195103 1197058 . + . ID=Thaps20769;Parent=Thaps20769;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1195103 1197058 . + 0 ID=Thaps20769;Parent=Thaps20769;rank=1 chr1 . exon 1195103 1197058 . + . ID=Thaps20769.1;Parent=Thaps20769;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1191974 1192861 . - . ID=Thaps260899;biotype=protein_coding;description=26S proteasome regulatory subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BQK4];external_name=RPN;logic_name=jgi_thaps3 chr1 ensembl transcript 1191974 1192861 . - . ID=Thaps260899;Parent=Thaps260899;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1191974 1192650 . - 0 ID=Thaps260899;Parent=Thaps260899;rank=2 chr1 . exon 1191974 1192650 . - . ID=Thaps260899.2;Parent=Thaps260899;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1192747 1192861 . - 0 ID=Thaps260899;Parent=Thaps260899;rank=1 chr1 . exon 1192747 1192861 . - . ID=Thaps260899.1;Parent=Thaps260899;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1191340 1191516 . + . ID=Thaps31402;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQK3];external_name=Thaps31402;logic_name=jgi_thaps3 chr1 ensembl transcript 1191340 1191516 . + . ID=Thaps31402;Parent=Thaps31402;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1191340 1191516 . + 0 ID=Thaps31402;Parent=Thaps31402;rank=1 chr1 . exon 1191340 1191516 . + . ID=Thaps31402.1;Parent=Thaps31402;constitutive=1;rank=1 chr1 . repeat_region 1203192 1203228 . ? . description=trf chr1 ensembl protein_coding_gene 1197161 1199458 . - . ID=Thaps1316;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQK7];external_name=Thaps1316;logic_name=jgi_thaps3 chr1 ensembl transcript 1197161 1199458 . - . ID=Thaps1316;Parent=Thaps1316;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1197161 1199458 . - 0 ID=Thaps1316;Parent=Thaps1316;rank=1 chr1 . exon 1197161 1199458 . - . ID=Thaps1316.1;Parent=Thaps1316;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1203069 1204460 . + . ID=Thaps20771;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQK9];external_name=Thaps20771;logic_name=jgi_thaps3 chr1 ensembl transcript 1203069 1204460 . + . ID=Thaps20771;Parent=Thaps20771;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1203069 1203689 . + 0 ID=Thaps20771;Parent=Thaps20771;rank=1 chr1 . exon 1203069 1203689 . + . ID=Thaps20771.1;Parent=Thaps20771;constitutive=1;rank=1 chr1 . CDS 1203777 1204460 . + 0 ID=Thaps20771;Parent=Thaps20771;rank=2 chr1 . exon 1203777 1204460 . + . ID=Thaps20771.2;Parent=Thaps20771;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1200451 1202429 . - . ID=Thaps260900;biotype=protein_coding;description=tRNA synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BQK8];external_name=Thaps260900;logic_name=jgi_thaps3 chr1 ensembl transcript 1200451 1202429 . - . ID=Thaps260900;Parent=Thaps260900;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1200451 1200552 . - 0 ID=Thaps260900;Parent=Thaps260900;rank=7 chr1 . exon 1200451 1200552 . - . ID=Thaps260900.7;Parent=Thaps260900;constitutive=1;rank=7 chr1 . CDS 1200607 1200971 . - 0 ID=Thaps260900;Parent=Thaps260900;rank=6 chr1 . exon 1200607 1200971 . - . ID=Thaps260900.6;Parent=Thaps260900;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 1201002 1201118 . - 0 ID=Thaps260900;Parent=Thaps260900;rank=5 chr1 . exon 1201002 1201118 . - . ID=Thaps260900.5;Parent=Thaps260900;constitutive=1;rank=5 chr1 . CDS 1201201 1201481 . - 0 ID=Thaps260900;Parent=Thaps260900;rank=4 chr1 . exon 1201201 1201481 . - . ID=Thaps260900.4;Parent=Thaps260900;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1201562 1201887 . - 0 ID=Thaps260900;Parent=Thaps260900;rank=3 chr1 . exon 1201562 1201887 . - . ID=Thaps260900.3;Parent=Thaps260900;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1201971 1202194 . - 0 ID=Thaps260900;Parent=Thaps260900;rank=2 chr1 . exon 1201971 1202194 . - . ID=Thaps260900.2;Parent=Thaps260900;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1202231 1202429 . - 0 ID=Thaps260900;Parent=Thaps260900;rank=1 chr1 . exon 1202231 1202429 . - . ID=Thaps260900.1;Parent=Thaps260900;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1212317 1214728 . - . ID=Thaps20773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQL1];external_name=Thaps20773;logic_name=jgi_thaps3 chr1 ensembl transcript 1212317 1214728 . - . ID=Thaps20773;Parent=Thaps20773;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1212317 1212580 . - 0 ID=Thaps20773;Parent=Thaps20773;rank=2 chr1 . exon 1212317 1212580 . - . ID=Thaps20773.2;Parent=Thaps20773;constitutive=1;rank=2 chr1 . CDS 1212659 1214728 . - 0 ID=Thaps20773;Parent=Thaps20773;rank=1 chr1 . exon 1212659 1214728 . - . ID=Thaps20773.1;Parent=Thaps20773;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1215626 1216891 . + . ID=Thaps31599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQL2];external_name=Thaps31599;logic_name=jgi_thaps3 chr1 ensembl transcript 1215626 1216891 . + . ID=Thaps31599;Parent=Thaps31599;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1215626 1215973 . + 0 ID=Thaps31599;Parent=Thaps31599;rank=1 chr1 . exon 1215626 1215973 . + . ID=Thaps31599.1;Parent=Thaps31599;constitutive=1;rank=1 chr1 . CDS 1216031 1216462 . + 0 ID=Thaps31599;Parent=Thaps31599;rank=2 chr1 . exon 1216031 1216462 . + . ID=Thaps31599.2;Parent=Thaps31599;constitutive=1;rank=2 chr1 . CDS 1216613 1216891 . + 0 ID=Thaps31599;Parent=Thaps31599;rank=3 chr1 . exon 1216613 1216891 . + . ID=Thaps31599.3;Parent=Thaps31599;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1208311 1210951 . - . ID=Thaps39098;biotype=protein_coding;description=Heat shock protein belonging to the HSP70 family [Source:UniProtKB/TrEMBL%3BAcc:B8BQL0];external_name=HSP70_1;logic_name=jgi_thaps3 chr1 ensembl transcript 1208311 1210951 . - . ID=Thaps39098;Parent=Thaps39098;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1208311 1210669 . - 0 ID=Thaps39098;Parent=Thaps39098;rank=2 chr1 . exon 1208311 1210669 . - . ID=Thaps39098.2;Parent=Thaps39098;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1210845 1210951 . - 0 ID=Thaps39098;Parent=Thaps39098;rank=1 chr1 . exon 1210845 1210951 . - . ID=Thaps39098.1;Parent=Thaps39098;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . biological_region 1218177 1218181 0.999 - . logic_name=eponine chr1 . repeat_region 1222604 1222727 . ? . description=trf chr1 . repeat_region 1223414 1223421 . ? . description=dust chr1 ensembl protein_coding_gene 1217724 1219766 . - . ID=Thaps1322;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQL3];external_name=Thaps1322;logic_name=jgi_thaps3 chr1 ensembl transcript 1217724 1219766 . - . ID=Thaps1322;Parent=Thaps1322;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1217724 1217746 . - 0 ID=Thaps1322;Parent=Thaps1322;rank=3 chr1 . exon 1217724 1217746 . - . ID=Thaps1322.3;Parent=Thaps1322;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1217827 1219604 . - 0 ID=Thaps1322;Parent=Thaps1322;rank=2 chr1 . exon 1217827 1219604 . - . ID=Thaps1322.2;Parent=Thaps1322;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1219729 1219766 . - 0 ID=Thaps1322;Parent=Thaps1322;rank=1 chr1 . exon 1219729 1219766 . - . ID=Thaps1322.1;Parent=Thaps1322;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1224599 1225323 . + . ID=Thaps1324;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQL5];external_name=Thaps1324;logic_name=jgi_thaps3 chr1 ensembl transcript 1224599 1225323 . + . ID=Thaps1324;Parent=Thaps1324;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1224599 1225014 . + 0 ID=Thaps1324;Parent=Thaps1324;rank=1 chr1 . exon 1224599 1225014 . + . ID=Thaps1324.1;Parent=Thaps1324;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1225101 1225323 . + 0 ID=Thaps1324;Parent=Thaps1324;rank=2 chr1 . exon 1225101 1225323 . + . ID=Thaps1324.2;Parent=Thaps1324;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1221171 1222267 . + . ID=Thaps15351;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQL4];external_name=Thaps15351;logic_name=jgi_thaps3 chr1 ensembl transcript 1221171 1222267 . + . ID=Thaps15351;Parent=Thaps15351;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1221171 1221222 . + 0 ID=Thaps15351;Parent=Thaps15351;rank=1 chr1 . exon 1221171 1221222 . + . ID=Thaps15351.1;Parent=Thaps15351;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1221296 1221920 . + 0 ID=Thaps15351;Parent=Thaps15351;rank=2 chr1 . exon 1221296 1221920 . + . ID=Thaps15351.2;Parent=Thaps15351;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1222054 1222267 . + 0 ID=Thaps15351;Parent=Thaps15351;rank=3 chr1 . exon 1222054 1222267 . + . ID=Thaps15351.3;Parent=Thaps15351;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 1226582 1227679 . + . ID=Thaps268009;biotype=protein_coding;description=Ftr1_plasma membrane iron permease [Source:UniProtKB/TrEMBL%3BAcc:B8BQL6];external_name=Thaps268009;logic_name=jgi_thaps3 chr1 ensembl transcript 1226582 1227679 . + . ID=Thaps268009;Parent=Thaps268009;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1226582 1227679 . + 0 ID=Thaps268009;Parent=Thaps268009;rank=1 chr1 . exon 1226582 1227679 . + . ID=Thaps268009.1;Parent=Thaps268009;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1227841 1229355 . - . ID=Thaps1326;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQL7];external_name=Thaps1326;logic_name=jgi_thaps3 chr1 ensembl transcript 1227841 1229355 . - . ID=Thaps1326;Parent=Thaps1326;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1227841 1228996 . - 0 ID=Thaps1326;Parent=Thaps1326;rank=2 chr1 . exon 1227841 1228996 . - . ID=Thaps1326.2;Parent=Thaps1326;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1229282 1229355 . - 0 ID=Thaps1326;Parent=Thaps1326;rank=1 chr1 . exon 1229282 1229355 . - . ID=Thaps1326.1;Parent=Thaps1326;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1234321 1237252 . - . ID=Thaps20776;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQL9];external_name=Thaps20776;logic_name=jgi_thaps3 chr1 ensembl transcript 1234321 1237252 . - . ID=Thaps20776;Parent=Thaps20776;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1234321 1234904 . - 0 ID=Thaps20776;Parent=Thaps20776;rank=5 chr1 . exon 1234321 1234904 . - . ID=Thaps20776.5;Parent=Thaps20776;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 1234982 1235153 . - 0 ID=Thaps20776;Parent=Thaps20776;rank=4 chr1 . exon 1234982 1235153 . - . ID=Thaps20776.4;Parent=Thaps20776;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 1235177 1235695 . - 0 ID=Thaps20776;Parent=Thaps20776;rank=3 chr1 . exon 1235177 1235695 . - . ID=Thaps20776.3;Parent=Thaps20776;constitutive=1;rank=3 chr1 . CDS 1235999 1236724 . - 0 ID=Thaps20776;Parent=Thaps20776;rank=2 chr1 . exon 1235999 1236724 . - . ID=Thaps20776.2;Parent=Thaps20776;constitutive=1;rank=2 chr1 . CDS 1236803 1237252 . - 0 ID=Thaps20776;Parent=Thaps20776;rank=1 chr1 . exon 1236803 1237252 . - . ID=Thaps20776.1;Parent=Thaps20776;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1232919 1234143 . + . ID=Thaps260906;biotype=protein_coding;description=Pyridoxal kinase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQL8];external_name=Thaps260906;logic_name=jgi_thaps3 chr1 ensembl transcript 1232919 1234143 . + . ID=Thaps260906;Parent=Thaps260906;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1232919 1232955 . + 0 ID=Thaps260906;Parent=Thaps260906;rank=1 chr1 . exon 1232919 1232955 . + . ID=Thaps260906.1;Parent=Thaps260906;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1233043 1233222 . + 0 ID=Thaps260906;Parent=Thaps260906;rank=2 chr1 . exon 1233043 1233222 . + . ID=Thaps260906.2;Parent=Thaps260906;constitutive=1;rank=2 chr1 . CDS 1233241 1233576 . + 0 ID=Thaps260906;Parent=Thaps260906;rank=3 chr1 . exon 1233241 1233576 . + . ID=Thaps260906.3;Parent=Thaps260906;constitutive=1;rank=3 chr1 . CDS 1233601 1233711 . + 0 ID=Thaps260906;Parent=Thaps260906;rank=4 chr1 . exon 1233601 1233711 . + . ID=Thaps260906.4;Parent=Thaps260906;constitutive=1;rank=4 chr1 . CDS 1233805 1233891 . + 0 ID=Thaps260906;Parent=Thaps260906;rank=5 chr1 . exon 1233805 1233891 . + . ID=Thaps260906.5;Parent=Thaps260906;constitutive=1;rank=5 chr1 . CDS 1233975 1234143 . + 0 ID=Thaps260906;Parent=Thaps260906;rank=6 chr1 . exon 1233975 1234143 . + . ID=Thaps260906.6;Parent=Thaps260906;constitutive=1;ensembl_end_phase=1;rank=6 chr1 ensembl protein_coding_gene 1237821 1241404 . - . ID=Thaps20777;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQM0];external_name=Thaps20777;logic_name=jgi_thaps3 chr1 ensembl transcript 1237821 1241404 . - . ID=Thaps20777;Parent=Thaps20777;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1237821 1238355 . - 0 ID=Thaps20777;Parent=Thaps20777;rank=3 chr1 . exon 1237821 1238355 . - . ID=Thaps20777.3;Parent=Thaps20777;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1238449 1238855 . - 0 ID=Thaps20777;Parent=Thaps20777;rank=2 chr1 . exon 1238449 1238855 . - . ID=Thaps20777.2;Parent=Thaps20777;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1238939 1241404 . - 0 ID=Thaps20777;Parent=Thaps20777;rank=1 chr1 . exon 1238939 1241404 . - . ID=Thaps20777.1;Parent=Thaps20777;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1242501 1244645 . + . ID=Thaps20778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQM1];external_name=Thaps20778;logic_name=jgi_thaps3 chr1 ensembl transcript 1242501 1244645 . + . ID=Thaps20778;Parent=Thaps20778;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1242501 1244645 . + 0 ID=Thaps20778;Parent=Thaps20778;rank=1 chr1 . exon 1242501 1244645 . + . ID=Thaps20778.1;Parent=Thaps20778;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1244801 1248475 . - . ID=Thaps268010;biotype=protein_coding;description=DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL%3BAcc:B8BQM2];external_name=RPC2;logic_name=jgi_thaps3 chr1 ensembl transcript 1244801 1248475 . - . ID=Thaps268010;Parent=Thaps268010;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1244801 1245572 . - 0 ID=Thaps268010;Parent=Thaps268010;rank=6 chr1 . exon 1244801 1245572 . - . ID=Thaps268010.6;Parent=Thaps268010;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 1245664 1246263 . - 0 ID=Thaps268010;Parent=Thaps268010;rank=5 chr1 . exon 1245664 1246263 . - . ID=Thaps268010.5;Parent=Thaps268010;constitutive=1;rank=5 chr1 . CDS 1246360 1246454 . - 0 ID=Thaps268010;Parent=Thaps268010;rank=4 chr1 . exon 1246360 1246454 . - . ID=Thaps268010.4;Parent=Thaps268010;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1246506 1247590 . - 0 ID=Thaps268010;Parent=Thaps268010;rank=3 chr1 . exon 1246506 1247590 . - . ID=Thaps268010.3;Parent=Thaps268010;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1247612 1248306 . - 0 ID=Thaps268010;Parent=Thaps268010;rank=2 chr1 . CDS 1248396 1248475 . - 0 ID=Thaps268010;Parent=Thaps268010;rank=1 chr1 . repeat_region 1256593 1256602 . ? . description=dust chr1 ensembl protein_coding_gene 1249966 1252694 . + . ID=Thaps12637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQM3];external_name=Thaps12637;logic_name=jgi_thaps3 chr1 ensembl transcript 1249966 1252694 . + . ID=Thaps12637;Parent=Thaps12637;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1249966 1250144 . + 0 ID=Thaps12637;Parent=Thaps12637;rank=1 chr1 . exon 1249966 1250144 . + . ID=Thaps12637.1;Parent=Thaps12637;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1250211 1250295 . + 0 ID=Thaps12637;Parent=Thaps12637;rank=2 chr1 . exon 1250211 1250295 . + . ID=Thaps12637.2;Parent=Thaps12637;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1250353 1250871 . + 0 ID=Thaps12637;Parent=Thaps12637;rank=3 chr1 . exon 1250353 1250871 . + . ID=Thaps12637.3;Parent=Thaps12637;constitutive=1;rank=3 chr1 . CDS 1250958 1251911 . + 0 ID=Thaps12637;Parent=Thaps12637;rank=4 chr1 . exon 1250958 1251911 . + . ID=Thaps12637.4;Parent=Thaps12637;constitutive=1;rank=4 chr1 . CDS 1252017 1252265 . + 0 ID=Thaps12637;Parent=Thaps12637;rank=5 chr1 . exon 1252017 1252265 . + . ID=Thaps12637.5;Parent=Thaps12637;constitutive=1;rank=5 chr1 . CDS 1252476 1252694 . + 0 ID=Thaps12637;Parent=Thaps12637;rank=6 chr1 . exon 1252476 1252694 . + . ID=Thaps12637.6;Parent=Thaps12637;constitutive=1;rank=6 chr1 . exon 1247612 1248306 . - . ID=Thaps268010.2;Parent=Thaps268010;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 1248396 1248475 . - . ID=Thaps268010.1;Parent=Thaps268010;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1254274 1256474 . + . ID=Thaps268011;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQM4];external_name=Thaps268011;logic_name=jgi_thaps3 chr1 ensembl transcript 1254274 1256474 . + . ID=Thaps268011;Parent=Thaps268011;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1254274 1255165 . + 0 ID=Thaps268011;Parent=Thaps268011;rank=1 chr1 . exon 1254274 1255165 . + . ID=Thaps268011.1;Parent=Thaps268011;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1255340 1255974 . + 0 ID=Thaps268011;Parent=Thaps268011;rank=2 chr1 . exon 1255340 1255974 . + . ID=Thaps268011.2;Parent=Thaps268011;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1256055 1256474 . + 0 ID=Thaps268011;Parent=Thaps268011;rank=3 chr1 . exon 1256055 1256474 . + . ID=Thaps268011.3;Parent=Thaps268011;constitutive=1;rank=3 chr1 . repeat_region 1256978 1257004 . ? . description=trf chr1 ensembl protein_coding_gene 1264897 1266420 . - . ID=Thaps1337;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQM8];external_name=Thaps1337;logic_name=jgi_thaps3 chr1 ensembl transcript 1264897 1266420 . - . ID=Thaps1337;Parent=Thaps1337;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1264897 1266420 . - 0 ID=Thaps1337;Parent=Thaps1337;rank=1 chr1 . exon 1264897 1266420 . - . ID=Thaps1337.1;Parent=Thaps1337;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1266715 1269096 . + . ID=Thaps1338;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQM9];external_name=Thaps1338;logic_name=jgi_thaps3 chr1 ensembl transcript 1266715 1269096 . + . ID=Thaps1338;Parent=Thaps1338;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1266715 1269096 . + 0 ID=Thaps1338;Parent=Thaps1338;rank=1 chr1 . exon 1266715 1269096 . + . ID=Thaps1338.1;Parent=Thaps1338;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1258170 1262583 . - . ID=Thaps20782;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQM6];external_name=Thaps20782;logic_name=jgi_thaps3 chr1 ensembl transcript 1258170 1262583 . - . ID=Thaps20782;Parent=Thaps20782;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1258170 1258764 . - 0 ID=Thaps20782;Parent=Thaps20782;rank=2 chr1 . exon 1258170 1258764 . - . ID=Thaps20782.2;Parent=Thaps20782;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1259324 1262583 . - 0 ID=Thaps20782;Parent=Thaps20782;rank=1 chr1 . exon 1259324 1262583 . - . ID=Thaps20782.1;Parent=Thaps20782;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1263222 1264839 . + . ID=Thaps20783;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQM7];external_name=Thaps20783;logic_name=jgi_thaps3 chr1 ensembl transcript 1263222 1264839 . + . ID=Thaps20783;Parent=Thaps20783;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1263222 1263543 . + 0 ID=Thaps20783;Parent=Thaps20783;rank=1 chr1 . exon 1263222 1263543 . + . ID=Thaps20783.1;Parent=Thaps20783;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1263577 1263628 . + 0 ID=Thaps20783;Parent=Thaps20783;rank=2 chr1 . exon 1263577 1263628 . + . ID=Thaps20783.2;Parent=Thaps20783;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1263718 1264417 . + 0 ID=Thaps20783;Parent=Thaps20783;rank=3 chr1 . exon 1263718 1264417 . + . ID=Thaps20783.3;Parent=Thaps20783;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1264501 1264839 . + 0 ID=Thaps20783;Parent=Thaps20783;rank=4 chr1 . exon 1264501 1264839 . + . ID=Thaps20783.4;Parent=Thaps20783;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 1257047 1257670 . + . ID=Thaps31259;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQM5];external_name=Thaps31259;logic_name=jgi_thaps3 chr1 ensembl transcript 1257047 1257670 . + . ID=Thaps31259;Parent=Thaps31259;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1257047 1257457 . + 0 ID=Thaps31259;Parent=Thaps31259;rank=1 chr1 . exon 1257047 1257457 . + . ID=Thaps31259.1;Parent=Thaps31259;constitutive=1;rank=1 chr1 . CDS 1257497 1257670 . + 0 ID=Thaps31259;Parent=Thaps31259;rank=2 chr1 . exon 1257497 1257670 . + . ID=Thaps31259.2;Parent=Thaps31259;constitutive=1;rank=2 chr1 . repeat_region 1269479 1269486 . ? . description=dust chr1 . repeat_region 1269903 1269915 . ? . description=dust chr1 . repeat_region 1271431 1271904 . - . description=scaffold_9_47_1_148179_151589 chr1 ensembl protein_coding_gene 1269354 1270171 . - . ID=Thaps1339;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQN0];external_name=Thaps1339;logic_name=jgi_thaps3 chr1 ensembl transcript 1269354 1270171 . - . ID=Thaps1339;Parent=Thaps1339;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1269354 1269439 . - 0 ID=Thaps1339;Parent=Thaps1339;rank=3 chr1 . exon 1269354 1269439 . - . ID=Thaps1339.3;Parent=Thaps1339;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1269556 1269941 . - 0 ID=Thaps1339;Parent=Thaps1339;rank=2 chr1 . exon 1269556 1269941 . - . ID=Thaps1339.2;Parent=Thaps1339;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1270065 1270171 . - 0 ID=Thaps1339;Parent=Thaps1339;rank=1 chr1 . exon 1270065 1270171 . - . ID=Thaps1339.1;Parent=Thaps1339;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1274549 1276686 . + . ID=Thaps1341;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQN2];external_name=Thaps1341;logic_name=jgi_thaps3 chr1 ensembl transcript 1274549 1276686 . + . ID=Thaps1341;Parent=Thaps1341;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1274549 1275680 . + 0 ID=Thaps1341;Parent=Thaps1341;rank=1 chr1 . exon 1274549 1275680 . + . ID=Thaps1341.1;Parent=Thaps1341;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1275753 1276062 . + 0 ID=Thaps1341;Parent=Thaps1341;rank=2 chr1 . exon 1275753 1276062 . + . ID=Thaps1341.2;Parent=Thaps1341;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1276143 1276686 . + 0 ID=Thaps1341;Parent=Thaps1341;rank=3 chr1 . exon 1276143 1276686 . + . ID=Thaps1341.3;Parent=Thaps1341;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 1270593 1274123 . - . ID=Thaps20784;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQN1];external_name=Thaps20784;logic_name=jgi_thaps3 chr1 ensembl transcript 1270593 1274123 . - . ID=Thaps20784;Parent=Thaps20784;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1270593 1271099 . - 0 ID=Thaps20784;Parent=Thaps20784;rank=4 chr1 . exon 1270593 1271099 . - . ID=Thaps20784.4;Parent=Thaps20784;constitutive=1;rank=4 chr1 . CDS 1271182 1271385 . - 0 ID=Thaps20784;Parent=Thaps20784;rank=3 chr1 . exon 1271182 1271385 . - . ID=Thaps20784.3;Parent=Thaps20784;constitutive=1;rank=3 chr1 . CDS 1271911 1272983 . - 0 ID=Thaps20784;Parent=Thaps20784;rank=2 chr1 . exon 1271911 1272983 . - . ID=Thaps20784.2;Parent=Thaps20784;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1273064 1274123 . - 0 ID=Thaps20784;Parent=Thaps20784;rank=1 chr1 . exon 1273064 1274123 . - . ID=Thaps20784.1;Parent=Thaps20784;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1281992 1284118 . + . ID=Thaps1344;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQN5];external_name=Thaps1344;logic_name=jgi_thaps3 chr1 ensembl transcript 1281992 1284118 . + . ID=Thaps1344;Parent=Thaps1344;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1281992 1283832 . + 0 ID=Thaps1344;Parent=Thaps1344;rank=1 chr1 . exon 1281992 1283832 . + . ID=Thaps1344.1;Parent=Thaps1344;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1283914 1284118 . + 0 ID=Thaps1344;Parent=Thaps1344;rank=2 chr1 . exon 1283914 1284118 . + . ID=Thaps1344.2;Parent=Thaps1344;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1276939 1277622 . - . ID=Thaps15819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQN3];external_name=Thaps15819;logic_name=jgi_thaps3 chr1 ensembl transcript 1276939 1277622 . - . ID=Thaps15819;Parent=Thaps15819;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1276939 1277622 . - 0 ID=Thaps15819;Parent=Thaps15819;rank=1 chr1 . exon 1276939 1277622 . - . ID=Thaps15819.1;Parent=Thaps15819;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1279645 1281381 . - . ID=Thaps20786;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQN4];external_name=Thaps20786;logic_name=jgi_thaps3 chr1 ensembl transcript 1279645 1281381 . - . ID=Thaps20786;Parent=Thaps20786;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1279645 1281381 . - 0 ID=Thaps20786;Parent=Thaps20786;rank=1 chr1 . exon 1279645 1281381 . - . ID=Thaps20786.1;Parent=Thaps20786;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1284307 1285176 . - . ID=Thaps20788;biotype=protein_coding;description=Methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQN6];external_name=Thaps20788;logic_name=jgi_thaps3 chr1 ensembl transcript 1284307 1285176 . - . ID=Thaps20788;Parent=Thaps20788;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1284307 1285176 . - 0 ID=Thaps20788;Parent=Thaps20788;rank=1 chr1 . exon 1284307 1285176 . - . ID=Thaps20788.1;Parent=Thaps20788;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1285821 1286915 . + . ID=Thaps39110;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQN7];external_name=Thaps39110;logic_name=jgi_thaps3 chr1 ensembl transcript 1285821 1286915 . + . ID=Thaps39110;Parent=Thaps39110;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1285821 1286535 . + 0 ID=Thaps39110;Parent=Thaps39110;rank=1 chr1 . exon 1285821 1286535 . + . ID=Thaps39110.1;Parent=Thaps39110;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1286611 1286915 . + 0 ID=Thaps39110;Parent=Thaps39110;rank=2 chr1 . exon 1286611 1286915 . + . ID=Thaps39110.2;Parent=Thaps39110;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1293792 1295543 . - . ID=Thaps20791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQP0];external_name=Thaps20791;logic_name=jgi_thaps3 chr1 ensembl transcript 1293792 1295543 . - . ID=Thaps20791;Parent=Thaps20791;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1293792 1295543 . - 0 ID=Thaps20791;Parent=Thaps20791;rank=1 chr1 . exon 1293792 1295543 . - . ID=Thaps20791.1;Parent=Thaps20791;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1292054 1292676 . + . ID=Thaps260914;biotype=protein_coding;description=Transporter belonging to the MFS superfamily [Source:UniProtKB/TrEMBL%3BAcc:B8BQN9];external_name=Thaps260914;logic_name=jgi_thaps3 chr1 ensembl transcript 1292054 1292676 . + . ID=Thaps260914;Parent=Thaps260914;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1292054 1292676 . + 0 ID=Thaps260914;Parent=Thaps260914;rank=1 chr1 . exon 1292054 1292676 . + . ID=Thaps260914.1;Parent=Thaps260914;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1296708 1298220 . + . ID=Thaps31232;biotype=protein_coding;description=6-phosphofructokinase [Source:UniProtKB/TrEMBL%3BAcc:B8BQP1];external_name=PFK1;logic_name=jgi_thaps3 chr1 ensembl transcript 1296708 1298220 . + . ID=Thaps31232;Parent=Thaps31232;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1296708 1296814 . + 0 ID=Thaps31232;Parent=Thaps31232;rank=1 chr1 . exon 1296708 1296814 . + . ID=Thaps31232.1;Parent=Thaps31232;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1296896 1296986 . + 0 ID=Thaps31232;Parent=Thaps31232;rank=2 chr1 . CDS 1297070 1297273 . + 0 ID=Thaps31232;Parent=Thaps31232;rank=3 chr1 . CDS 1297350 1297382 . + 0 ID=Thaps31232;Parent=Thaps31232;rank=4 chr1 . CDS 1297471 1298220 . + 0 ID=Thaps31232;Parent=Thaps31232;rank=5 chr1 ensembl protein_coding_gene 1289064 1289534 . - . ID=Thaps31382;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQN8];external_name=Thaps31382;logic_name=jgi_thaps3 chr1 ensembl transcript 1289064 1289534 . - . ID=Thaps31382;Parent=Thaps31382;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1289064 1289534 . - 0 ID=Thaps31382;Parent=Thaps31382;rank=1 chr1 . exon 1289064 1289534 . - . ID=Thaps31382.1;Parent=Thaps31382;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1302860 1305823 . - . ID=Thaps20792;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQP2];external_name=Thaps20792;logic_name=jgi_thaps3 chr1 ensembl transcript 1302860 1305823 . - . ID=Thaps20792;Parent=Thaps20792;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1302860 1305823 . - 0 ID=Thaps20792;Parent=Thaps20792;rank=1 chr1 . exon 1302860 1305823 . - . ID=Thaps20792.1;Parent=Thaps20792;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1306575 1307616 . + . ID=Thaps260917;biotype=protein_coding;description=3'%2C5'-cyclic nucleotide phosphodiesterase [Source:UniProtKB/TrEMBL%3BAcc:B8BQP3];external_name=Thaps260917;logic_name=jgi_thaps3 chr1 ensembl transcript 1306575 1307616 . + . ID=Thaps260917;Parent=Thaps260917;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1306575 1306725 . + 0 ID=Thaps260917;Parent=Thaps260917;rank=1 chr1 . exon 1306575 1306725 . + . ID=Thaps260917.1;Parent=Thaps260917;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1306804 1306951 . + 0 ID=Thaps260917;Parent=Thaps260917;rank=2 chr1 . exon 1306804 1306951 . + . ID=Thaps260917.2;Parent=Thaps260917;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1307006 1307616 . + 0 ID=Thaps260917;Parent=Thaps260917;rank=3 chr1 . exon 1296896 1296986 . + . ID=Thaps31232.2;Parent=Thaps31232;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 1297070 1297273 . + . ID=Thaps31232.3;Parent=Thaps31232;constitutive=1;rank=3 chr1 . exon 1297350 1297382 . + . ID=Thaps31232.4;Parent=Thaps31232;constitutive=1;rank=4 chr1 . exon 1297471 1298220 . + . ID=Thaps31232.5;Parent=Thaps31232;constitutive=1;rank=5 chr1 . repeat_region 1309272 1309310 . ? . description=trf chr1 . repeat_region 1311992 1312591 . ? . description=trf chr1 ensembl protein_coding_gene 1308170 1309028 . - . ID=Thaps1353;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQP4];external_name=Thaps1353;logic_name=jgi_thaps3 chr1 ensembl transcript 1308170 1309028 . - . ID=Thaps1353;Parent=Thaps1353;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1308170 1308316 . - 0 ID=Thaps1353;Parent=Thaps1353;rank=2 chr1 . exon 1308170 1308316 . - . ID=Thaps1353.2;Parent=Thaps1353;constitutive=1;rank=2 chr1 . CDS 1308618 1309028 . - 0 ID=Thaps1353;Parent=Thaps1353;rank=1 chr1 . exon 1308618 1309028 . - . ID=Thaps1353.1;Parent=Thaps1353;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1309298 1309843 . + . ID=Thaps1354;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQP5];external_name=Thaps1354;logic_name=jgi_thaps3 chr1 ensembl transcript 1309298 1309843 . + . ID=Thaps1354;Parent=Thaps1354;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1309298 1309843 . + 0 ID=Thaps1354;Parent=Thaps1354;rank=1 chr1 . exon 1309298 1309843 . + . ID=Thaps1354.1;Parent=Thaps1354;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1311917 1312612 . - . ID=Thaps1355;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQP6];external_name=Thaps1355;logic_name=jgi_thaps3 chr1 ensembl transcript 1311917 1312612 . - . ID=Thaps1355;Parent=Thaps1355;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1311917 1312612 . - 0 ID=Thaps1355;Parent=Thaps1355;rank=1 chr1 . exon 1311917 1312612 . - . ID=Thaps1355.1;Parent=Thaps1355;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1312738 1315473 . + . ID=Thaps1356;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQP7];external_name=Thaps1356;logic_name=jgi_thaps3 chr1 ensembl transcript 1312738 1315473 . + . ID=Thaps1356;Parent=Thaps1356;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1312738 1313722 . + 0 ID=Thaps1356;Parent=Thaps1356;rank=1 chr1 . exon 1312738 1313722 . + . ID=Thaps1356.1;Parent=Thaps1356;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1313894 1315473 . + 0 ID=Thaps1356;Parent=Thaps1356;rank=2 chr1 . exon 1313894 1315473 . + . ID=Thaps1356.2;Parent=Thaps1356;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1316144 1317198 . - . ID=Thaps1357;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQP8];external_name=Thaps1357;logic_name=jgi_thaps3 chr1 ensembl transcript 1316144 1317198 . - . ID=Thaps1357;Parent=Thaps1357;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1316144 1316689 . - 0 ID=Thaps1357;Parent=Thaps1357;rank=2 chr1 . exon 1316144 1316689 . - . ID=Thaps1357.2;Parent=Thaps1357;constitutive=1;rank=2 chr1 . CDS 1316914 1317198 . - 0 ID=Thaps1357;Parent=Thaps1357;rank=1 chr1 . exon 1307006 1307616 . + . ID=Thaps260917.3;Parent=Thaps260917;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . repeat_region 1317243 1317250 . ? . description=dust chr1 . repeat_region 1317431 1317442 . ? . description=dust chr1 . repeat_region 1320639 1320646 . ? . description=dust chr1 . repeat_region 1322273 1322308 . ? . description=dust chr1 . repeat_region 1323002 1323029 . ? . description=dust chr1 . repeat_region 1323588 1323615 . ? . description=dust chr1 . repeat_region 1323700 1323719 . ? . description=dust chr1 . repeat_region 1324051 1324076 . ? . description=dust chr1 . repeat_region 1324186 1324206 . ? . description=dust chr1 . repeat_region 1324389 1324435 . ? . description=dust chr1 . repeat_region 1324771 1324791 . ? . description=dust chr1 . exon 1316914 1317198 . - . ID=Thaps1357.1;Parent=Thaps1357;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1317542 1318813 . + . ID=Thaps20793;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQP9];external_name=Thaps20793;logic_name=jgi_thaps3 chr1 ensembl transcript 1317542 1318813 . + . ID=Thaps20793;Parent=Thaps20793;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1317542 1318813 . + 0 ID=Thaps20793;Parent=Thaps20793;rank=1 chr1 . exon 1317542 1318813 . + . ID=Thaps20793.1;Parent=Thaps20793;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1319943 1321094 . + . ID=Thaps20794;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ0];external_name=Thaps20794;logic_name=jgi_thaps3 chr1 ensembl transcript 1319943 1321094 . + . ID=Thaps20794;Parent=Thaps20794;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1319943 1321094 . + 0 ID=Thaps20794;Parent=Thaps20794;rank=1 chr1 . exon 1319943 1321094 . + . ID=Thaps20794.1;Parent=Thaps20794;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1321318 1323034 . - . ID=Thaps20795;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ1];external_name=Thaps20795;logic_name=jgi_thaps3 chr1 ensembl transcript 1321318 1323034 . - . ID=Thaps20795;Parent=Thaps20795;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1321318 1321974 . - 0 ID=Thaps20795;Parent=Thaps20795;rank=3 chr1 . exon 1321318 1321974 . - . ID=Thaps20795.3;Parent=Thaps20795;constitutive=1;rank=3 chr1 . CDS 1322112 1322706 . - 0 ID=Thaps20795;Parent=Thaps20795;rank=2 chr1 . exon 1322112 1322706 . - . ID=Thaps20795.2;Parent=Thaps20795;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1322742 1323034 . - 0 ID=Thaps20795;Parent=Thaps20795;rank=1 chr1 . exon 1322742 1323034 . - . ID=Thaps20795.1;Parent=Thaps20795;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1323460 1327849 . + . ID=Thaps20796;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ2];external_name=Thaps20796;logic_name=jgi_thaps3 chr1 ensembl transcript 1323460 1327849 . + . ID=Thaps20796;Parent=Thaps20796;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1323460 1324084 . + 0 ID=Thaps20796;Parent=Thaps20796;rank=1 chr1 . exon 1323460 1324084 . + . ID=Thaps20796.1;Parent=Thaps20796;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1324159 1325911 . + 0 ID=Thaps20796;Parent=Thaps20796;rank=2 chr1 . exon 1324159 1325911 . + . ID=Thaps20796.2;Parent=Thaps20796;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1325999 1326475 . + 0 ID=Thaps20796;Parent=Thaps20796;rank=3 chr1 . exon 1325999 1326475 . + . ID=Thaps20796.3;Parent=Thaps20796;constitutive=1;rank=3 chr1 . CDS 1326559 1327849 . + 0 ID=Thaps20796;Parent=Thaps20796;rank=4 chr1 . exon 1326559 1327849 . + . ID=Thaps20796.4;Parent=Thaps20796;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . repeat_region 1330810 1330829 . ? . description=trf chr1 ensembl protein_coding_gene 1328057 1329781 . - . ID=Thaps20797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ3];external_name=Thaps20797;logic_name=jgi_thaps3 chr1 ensembl transcript 1328057 1329781 . - . ID=Thaps20797;Parent=Thaps20797;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1328057 1329781 . - 0 ID=Thaps20797;Parent=Thaps20797;rank=1 chr1 . exon 1328057 1329781 . - . ID=Thaps20797.1;Parent=Thaps20797;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1330606 1334933 . + . ID=Thaps20798;biotype=protein_coding;description=Condensin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ4];external_name=Thaps20798;logic_name=jgi_thaps3 chr1 ensembl transcript 1330606 1334933 . + . ID=Thaps20798;Parent=Thaps20798;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1330606 1330892 . + 0 ID=Thaps20798;Parent=Thaps20798;rank=1 chr1 . exon 1330606 1330892 . + . ID=Thaps20798.1;Parent=Thaps20798;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1330982 1332272 . + 0 ID=Thaps20798;Parent=Thaps20798;rank=2 chr1 . exon 1330982 1332272 . + . ID=Thaps20798.2;Parent=Thaps20798;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1332357 1334933 . + 0 ID=Thaps20798;Parent=Thaps20798;rank=3 chr1 . exon 1332357 1334933 . + . ID=Thaps20798.3;Parent=Thaps20798;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1335475 1336827 . + . ID=Thaps20799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ5];external_name=Thaps20799;logic_name=jgi_thaps3 chr1 ensembl transcript 1335475 1336827 . + . ID=Thaps20799;Parent=Thaps20799;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1335475 1336827 . + 0 ID=Thaps20799;Parent=Thaps20799;rank=1 chr1 . exon 1335475 1336827 . + . ID=Thaps20799.1;Parent=Thaps20799;constitutive=1;rank=1 chr1 . repeat_region 1338247 1338255 . ? . description=dust chr1 . repeat_region 1342184 1342191 . ? . description=dust chr1 ensembl protein_coding_gene 1337082 1338173 . - . ID=Thaps1365;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ6];external_name=Thaps1365;logic_name=jgi_thaps3 chr1 ensembl transcript 1337082 1338173 . - . ID=Thaps1365;Parent=Thaps1365;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1337082 1338173 . - 0 ID=Thaps1365;Parent=Thaps1365;rank=1 chr1 . exon 1337082 1338173 . - . ID=Thaps1365.1;Parent=Thaps1365;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1338528 1340108 . + . ID=Thaps1366;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ7];external_name=Thaps1366;logic_name=jgi_thaps3 chr1 ensembl transcript 1338528 1340108 . + . ID=Thaps1366;Parent=Thaps1366;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1338528 1340108 . + 0 ID=Thaps1366;Parent=Thaps1366;rank=1 chr1 . exon 1338528 1340108 . + . ID=Thaps1366.1;Parent=Thaps1366;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1340154 1342778 . - . ID=Thaps1367;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ8];external_name=Thaps1367;logic_name=jgi_thaps3 chr1 ensembl transcript 1340154 1342778 . - . ID=Thaps1367;Parent=Thaps1367;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1340154 1340168 . - 0 ID=Thaps1367;Parent=Thaps1367;rank=3 chr1 . exon 1340154 1340168 . - . ID=Thaps1367.3;Parent=Thaps1367;constitutive=1;rank=3 chr1 . CDS 1340251 1341900 . - 0 ID=Thaps1367;Parent=Thaps1367;rank=2 chr1 . exon 1340251 1341900 . - . ID=Thaps1367.2;Parent=Thaps1367;constitutive=1;rank=2 chr1 . CDS 1342026 1342778 . - 0 ID=Thaps1367;Parent=Thaps1367;rank=1 chr1 . exon 1342026 1342778 . - . ID=Thaps1367.1;Parent=Thaps1367;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1344266 1346757 . + . ID=Thaps20800;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQQ9];external_name=Thaps20800;logic_name=jgi_thaps3 chr1 ensembl transcript 1344266 1346757 . + . ID=Thaps20800;Parent=Thaps20800;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1344266 1345771 . + 0 ID=Thaps20800;Parent=Thaps20800;rank=1 chr1 . exon 1344266 1345771 . + . ID=Thaps20800.1;Parent=Thaps20800;constitutive=1;rank=1 chr1 . CDS 1345850 1345981 . + 0 ID=Thaps20800;Parent=Thaps20800;rank=2 chr1 . exon 1345850 1345981 . + . ID=Thaps20800.2;Parent=Thaps20800;constitutive=1;rank=2 chr1 . CDS 1346041 1346307 . + 0 ID=Thaps20800;Parent=Thaps20800;rank=3 chr1 . exon 1346041 1346307 . + . ID=Thaps20800.3;Parent=Thaps20800;constitutive=1;rank=3 chr1 . CDS 1346391 1346466 . + 0 ID=Thaps20800;Parent=Thaps20800;rank=4 chr1 . exon 1346391 1346466 . + . ID=Thaps20800.4;Parent=Thaps20800;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 1346499 1346568 . + 0 ID=Thaps20800;Parent=Thaps20800;rank=5 chr1 . exon 1346499 1346568 . + . ID=Thaps20800.5;Parent=Thaps20800;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 1346610 1346757 . + 0 ID=Thaps20800;Parent=Thaps20800;rank=6 chr1 . exon 1346610 1346757 . + . ID=Thaps20800.6;Parent=Thaps20800;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . repeat_region 1348295 1348323 . ? . description=trf chr1 ensembl protein_coding_gene 1353523 1356066 . + . ID=Thaps1372;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQR5];external_name=Thaps1372;logic_name=jgi_thaps3 chr1 ensembl transcript 1353523 1356066 . + . ID=Thaps1372;Parent=Thaps1372;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1353523 1353623 . + 0 ID=Thaps1372;Parent=Thaps1372;rank=1 chr1 . exon 1353523 1353623 . + . ID=Thaps1372.1;Parent=Thaps1372;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1353750 1354680 . + 0 ID=Thaps1372;Parent=Thaps1372;rank=2 chr1 . exon 1353750 1354680 . + . ID=Thaps1372.2;Parent=Thaps1372;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1354789 1356066 . + 0 ID=Thaps1372;Parent=Thaps1372;rank=3 chr1 . exon 1354789 1356066 . + . ID=Thaps1372.3;Parent=Thaps1372;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1356166 1356741 . + . ID=Thaps1373;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQR6];external_name=Thaps1373;logic_name=jgi_thaps3 chr1 ensembl transcript 1356166 1356741 . + . ID=Thaps1373;Parent=Thaps1373;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1356166 1356741 . + 0 ID=Thaps1373;Parent=Thaps1373;rank=1 chr1 . exon 1356166 1356741 . + . ID=Thaps1373.1;Parent=Thaps1373;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1350551 1351388 . - . ID=Thaps260919;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQR3];external_name=Thaps260919;logic_name=jgi_thaps3 chr1 ensembl transcript 1350551 1351388 . - . ID=Thaps260919;Parent=Thaps260919;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1350551 1350617 . - 0 ID=Thaps260919;Parent=Thaps260919;rank=5 chr1 . exon 1350551 1350617 . - . ID=Thaps260919.5;Parent=Thaps260919;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 1350636 1350691 . - 0 ID=Thaps260919;Parent=Thaps260919;rank=4 chr1 . exon 1350636 1350691 . - . ID=Thaps260919.4;Parent=Thaps260919;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1350755 1351072 . - 0 ID=Thaps260919;Parent=Thaps260919;rank=3 chr1 . exon 1350755 1351072 . - . ID=Thaps260919.3;Parent=Thaps260919;constitutive=1;rank=3 chr1 . CDS 1351175 1351332 . - 0 ID=Thaps260919;Parent=Thaps260919;rank=2 chr1 . exon 1351175 1351332 . - . ID=Thaps260919.2;Parent=Thaps260919;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1351348 1351388 . - 0 ID=Thaps260919;Parent=Thaps260919;rank=1 chr1 . exon 1351348 1351388 . - . ID=Thaps260919.1;Parent=Thaps260919;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1348648 1348872 . + . ID=Thaps30939;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQR1];external_name=Thaps30939;logic_name=jgi_thaps3 chr1 ensembl transcript 1348648 1348872 . + . ID=Thaps30939;Parent=Thaps30939;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1348648 1348872 . + 0 ID=Thaps30939;Parent=Thaps30939;rank=1 chr1 . exon 1348648 1348872 . + . ID=Thaps30939.1;Parent=Thaps30939;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1349300 1349674 . - . ID=Thaps31150;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQR2];external_name=Thaps31150;logic_name=jgi_thaps3 chr1 ensembl transcript 1349300 1349674 . - . ID=Thaps31150;Parent=Thaps31150;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1349300 1349674 . - 0 ID=Thaps31150;Parent=Thaps31150;rank=1 chr1 . exon 1349300 1349674 . - . ID=Thaps31150.1;Parent=Thaps31150;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1351806 1353116 . - . ID=Thaps31317;biotype=protein_coding;description=Udp-d-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BQR4];external_name=UGDH2;logic_name=jgi_thaps3 chr1 ensembl transcript 1351806 1353116 . - . ID=Thaps31317;Parent=Thaps31317;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1351806 1353116 . - 0 ID=Thaps31317;Parent=Thaps31317;rank=1 chr1 . exon 1351806 1353116 . - . ID=Thaps31317.1;Parent=Thaps31317;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1347258 1347971 . - . ID=Thaps31380;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQR0];external_name=Thaps31380;logic_name=jgi_thaps3 chr1 ensembl transcript 1347258 1347971 . - . ID=Thaps31380;Parent=Thaps31380;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1347258 1347469 . - 0 ID=Thaps31380;Parent=Thaps31380;rank=3 chr1 . exon 1347258 1347469 . - . ID=Thaps31380.3;Parent=Thaps31380;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1347527 1347734 . - 0 ID=Thaps31380;Parent=Thaps31380;rank=2 chr1 . exon 1347527 1347734 . - . ID=Thaps31380.2;Parent=Thaps31380;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1347858 1347971 . - 0 ID=Thaps31380;Parent=Thaps31380;rank=1 chr1 . exon 1347858 1347971 . - . ID=Thaps31380.1;Parent=Thaps31380;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1356787 1357941 . - . ID=Thaps1374;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQR7];external_name=Thaps1374;logic_name=jgi_thaps3 chr1 ensembl transcript 1356787 1357941 . - . ID=Thaps1374;Parent=Thaps1374;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1356787 1357250 . - 0 ID=Thaps1374;Parent=Thaps1374;rank=3 chr1 . exon 1356787 1357250 . - . ID=Thaps1374.3;Parent=Thaps1374;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1357335 1357509 . - 0 ID=Thaps1374;Parent=Thaps1374;rank=2 chr1 . exon 1357335 1357509 . - . ID=Thaps1374.2;Parent=Thaps1374;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1357555 1357941 . - 0 ID=Thaps1374;Parent=Thaps1374;rank=1 chr1 . exon 1357555 1357941 . - . ID=Thaps1374.1;Parent=Thaps1374;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1360183 1360948 . + . ID=Thaps1376;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQR9];external_name=Thaps1376;logic_name=jgi_thaps3 chr1 ensembl transcript 1360183 1360948 . + . ID=Thaps1376;Parent=Thaps1376;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1360183 1360662 . + 0 ID=Thaps1376;Parent=Thaps1376;rank=1 chr1 . exon 1360183 1360662 . + . ID=Thaps1376.1;Parent=Thaps1376;constitutive=1;rank=1 chr1 . CDS 1360787 1360948 . + 0 ID=Thaps1376;Parent=Thaps1376;rank=2 chr1 . exon 1360787 1360948 . + . ID=Thaps1376.2;Parent=Thaps1376;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1362993 1363748 . - . ID=Thaps20804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQS1];external_name=Thaps20804;logic_name=jgi_thaps3 chr1 ensembl transcript 1362993 1363748 . - . ID=Thaps20804;Parent=Thaps20804;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1362993 1363377 . - 0 ID=Thaps20804;Parent=Thaps20804;rank=2 chr1 . exon 1362993 1363377 . - . ID=Thaps20804.2;Parent=Thaps20804;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1363540 1363748 . - 0 ID=Thaps20804;Parent=Thaps20804;rank=1 chr1 . exon 1363540 1363748 . - . ID=Thaps20804.1;Parent=Thaps20804;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1361819 1362504 . + . ID=Thaps260922;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQS0];external_name=Thaps260922;logic_name=jgi_thaps3 chr1 ensembl transcript 1361819 1362504 . + . ID=Thaps260922;Parent=Thaps260922;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1361819 1361990 . + 0 ID=Thaps260922;Parent=Thaps260922;rank=1 chr1 . exon 1361819 1361990 . + . ID=Thaps260922.1;Parent=Thaps260922;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1362074 1362112 . + 0 ID=Thaps260922;Parent=Thaps260922;rank=2 chr1 . exon 1362074 1362112 . + . ID=Thaps260922.2;Parent=Thaps260922;constitutive=1;rank=2 chr1 . CDS 1362188 1362504 . + 0 ID=Thaps260922;Parent=Thaps260922;rank=3 chr1 . exon 1362188 1362504 . + . ID=Thaps260922.3;Parent=Thaps260922;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1364422 1365359 . - . ID=Thaps260923;biotype=protein_coding;description=Carbamoyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQS2];external_name=Thaps260923;logic_name=jgi_thaps3 chr1 ensembl transcript 1364422 1365359 . - . ID=Thaps260923;Parent=Thaps260923;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1364422 1365086 . - 0 ID=Thaps260923;Parent=Thaps260923;rank=2 chr1 . exon 1364422 1365086 . - . ID=Thaps260923.2;Parent=Thaps260923;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1365105 1365359 . - 0 ID=Thaps260923;Parent=Thaps260923;rank=1 chr1 . exon 1365105 1365359 . - . ID=Thaps260923.1;Parent=Thaps260923;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1358172 1359702 . + . ID=Thaps31424;biotype=protein_coding;description=Aspartate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQR8];external_name=AAT2;logic_name=jgi_thaps3 chr1 ensembl transcript 1358172 1359702 . + . ID=Thaps31424;Parent=Thaps31424;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1358172 1358415 . + 0 ID=Thaps31424;Parent=Thaps31424;rank=1 chr1 . exon 1358172 1358415 . + . ID=Thaps31424.1;Parent=Thaps31424;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1358505 1358671 . + 0 ID=Thaps31424;Parent=Thaps31424;rank=2 chr1 . exon 1358505 1358671 . + . ID=Thaps31424.2;Parent=Thaps31424;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1358778 1359048 . + 0 ID=Thaps31424;Parent=Thaps31424;rank=3 chr1 . exon 1358778 1359048 . + . ID=Thaps31424.3;Parent=Thaps31424;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1359134 1359702 . + 0 ID=Thaps31424;Parent=Thaps31424;rank=4 chr1 . exon 1359134 1359702 . + . ID=Thaps31424.4;Parent=Thaps31424;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . repeat_region 1367228 1367257 . ? . description=dust chr1 ensembl protein_coding_gene 1368131 1369651 . - . ID=Thaps1381;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQS4];external_name=Thaps1381;logic_name=jgi_thaps3 chr1 ensembl transcript 1368131 1369651 . - . ID=Thaps1381;Parent=Thaps1381;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1368131 1369651 . - 0 ID=Thaps1381;Parent=Thaps1381;rank=1 chr1 . exon 1368131 1369651 . - . ID=Thaps1381.1;Parent=Thaps1381;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1369964 1371043 . + . ID=Thaps1382;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQS5];external_name=Thaps1382;logic_name=jgi_thaps3 chr1 ensembl transcript 1369964 1371043 . + . ID=Thaps1382;Parent=Thaps1382;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1369964 1371043 . + 0 ID=Thaps1382;Parent=Thaps1382;rank=1 chr1 . exon 1369964 1371043 . + . ID=Thaps1382.1;Parent=Thaps1382;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1371106 1373101 . - . ID=Thaps1383;biotype=protein_coding;description=Precursor of hydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BQS6];external_name=PDS1;logic_name=jgi_thaps3 chr1 ensembl transcript 1371106 1373101 . - . ID=Thaps1383;Parent=Thaps1383;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1371106 1372066 . - 0 ID=Thaps1383;Parent=Thaps1383;rank=3 chr1 . exon 1371106 1372066 . - . ID=Thaps1383.3;Parent=Thaps1383;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1372145 1372807 . - 0 ID=Thaps1383;Parent=Thaps1383;rank=2 chr1 . exon 1372145 1372807 . - . ID=Thaps1383.2;Parent=Thaps1383;constitutive=1;rank=2 chr1 . CDS 1372917 1373101 . - 0 ID=Thaps1383;Parent=Thaps1383;rank=1 chr1 . exon 1372917 1373101 . - . ID=Thaps1383.1;Parent=Thaps1383;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1374478 1375950 . + . ID=Thaps1385;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQS8];external_name=Thaps1385;logic_name=jgi_thaps3 chr1 ensembl transcript 1374478 1375950 . + . ID=Thaps1385;Parent=Thaps1385;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1374478 1374805 . + 0 ID=Thaps1385;Parent=Thaps1385;rank=1 chr1 . exon 1374478 1374805 . + . ID=Thaps1385.1;Parent=Thaps1385;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1374877 1375191 . + 0 ID=Thaps1385;Parent=Thaps1385;rank=2 chr1 . exon 1374877 1375191 . + . ID=Thaps1385.2;Parent=Thaps1385;constitutive=1;rank=2 chr1 . CDS 1375276 1375505 . + 0 ID=Thaps1385;Parent=Thaps1385;rank=3 chr1 . exon 1375276 1375505 . + . ID=Thaps1385.3;Parent=Thaps1385;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1375582 1375950 . + 0 ID=Thaps1385;Parent=Thaps1385;rank=4 chr1 . exon 1375582 1375950 . + . ID=Thaps1385.4;Parent=Thaps1385;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 1373360 1374283 . + . ID=Thaps20807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQS7];external_name=Thaps20807;logic_name=jgi_thaps3 chr1 ensembl transcript 1373360 1374283 . + . ID=Thaps20807;Parent=Thaps20807;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1373360 1374283 . + 0 ID=Thaps20807;Parent=Thaps20807;rank=1 chr1 . exon 1373360 1374283 . + . ID=Thaps20807.1;Parent=Thaps20807;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1376334 1379543 . + . ID=Thaps20808;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQS9];external_name=Thaps20808;logic_name=jgi_thaps3 chr1 ensembl transcript 1376334 1379543 . + . ID=Thaps20808;Parent=Thaps20808;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1376334 1379543 . + 0 ID=Thaps20808;Parent=Thaps20808;rank=1 chr1 . exon 1376334 1379543 . + . ID=Thaps20808.1;Parent=Thaps20808;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1367598 1367834 . + . ID=Thaps31222;biotype=protein_coding;description=30S ribosomal protein S15 [Source:UniProtKB/TrEMBL%3BAcc:B8BQS3];external_name=Thaps31222;logic_name=jgi_thaps3 chr1 ensembl transcript 1367598 1367834 . + . ID=Thaps31222;Parent=Thaps31222;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1367598 1367834 . + 0 ID=Thaps31222;Parent=Thaps31222;rank=1 chr1 . exon 1367598 1367834 . + . ID=Thaps31222.1;Parent=Thaps31222;constitutive=1;rank=1 chr1 . repeat_region 1376882 1376915 . ? . description=trf chr1 . repeat_region 1381730 1381872 . ? . description=trf chr1 . repeat_region 1381730 1381898 . ? . description=trf chr1 . repeat_region 1381752 1381872 . ? . description=trf chr1 . repeat_region 1383021 1383200 . ? . description=trf chr1 ensembl protein_coding_gene 1381173 1382303 . - . ID=Thaps1388;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQT1];external_name=Thaps1388;logic_name=jgi_thaps3 chr1 ensembl transcript 1381173 1382303 . - . ID=Thaps1388;Parent=Thaps1388;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1381173 1381475 . - 0 ID=Thaps1388;Parent=Thaps1388;rank=5 chr1 . exon 1381173 1381475 . - . ID=Thaps1388.5;Parent=Thaps1388;constitutive=1;rank=5 chr1 . CDS 1381607 1381639 . - 0 ID=Thaps1388;Parent=Thaps1388;rank=4 chr1 . exon 1381607 1381639 . - . ID=Thaps1388.4;Parent=Thaps1388;constitutive=1;rank=4 chr1 . CDS 1381724 1381894 . - 0 ID=Thaps1388;Parent=Thaps1388;rank=3 chr1 . exon 1381724 1381894 . - . ID=Thaps1388.3;Parent=Thaps1388;constitutive=1;rank=3 chr1 . CDS 1381980 1382027 . - 0 ID=Thaps1388;Parent=Thaps1388;rank=2 chr1 . exon 1381980 1382027 . - . ID=Thaps1388.2;Parent=Thaps1388;constitutive=1;rank=2 chr1 . CDS 1382115 1382303 . - 0 ID=Thaps1388;Parent=Thaps1388;rank=1 chr1 . exon 1382115 1382303 . - . ID=Thaps1388.1;Parent=Thaps1388;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1386269 1387381 . + . ID=Thaps20810;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQT4];external_name=Thaps20810;logic_name=jgi_thaps3 chr1 ensembl transcript 1386269 1387381 . + . ID=Thaps20810;Parent=Thaps20810;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1386269 1387381 . + 0 ID=Thaps20810;Parent=Thaps20810;rank=1 chr1 . exon 1386269 1387381 . + . ID=Thaps20810.1;Parent=Thaps20810;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1379667 1380418 . - . ID=Thaps260925;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQT0];external_name=Thaps260925;logic_name=jgi_thaps3 chr1 ensembl transcript 1379667 1380418 . - . ID=Thaps260925;Parent=Thaps260925;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1379667 1379914 . - 0 ID=Thaps260925;Parent=Thaps260925;rank=3 chr1 . exon 1379667 1379914 . - . ID=Thaps260925.3;Parent=Thaps260925;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1380035 1380213 . - 0 ID=Thaps260925;Parent=Thaps260925;rank=2 chr1 . exon 1380035 1380213 . - . ID=Thaps260925.2;Parent=Thaps260925;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1380298 1380418 . - 0 ID=Thaps260925;Parent=Thaps260925;rank=1 chr1 . exon 1380298 1380418 . - . ID=Thaps260925.1;Parent=Thaps260925;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1383636 1384254 . + . ID=Thaps260926;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQT2];external_name=Thaps260926;logic_name=jgi_thaps3 chr1 ensembl transcript 1383636 1384254 . + . ID=Thaps260926;Parent=Thaps260926;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1383636 1384008 . + 0 ID=Thaps260926;Parent=Thaps260926;rank=1 chr1 . exon 1383636 1384008 . + . ID=Thaps260926.1;Parent=Thaps260926;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1384093 1384254 . + 0 ID=Thaps260926;Parent=Thaps260926;rank=2 chr1 . exon 1384093 1384254 . + . ID=Thaps260926.2;Parent=Thaps260926;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1385239 1385484 . - . ID=Thaps30887;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQT3];external_name=Thaps30887;logic_name=jgi_thaps3 chr1 ensembl transcript 1385239 1385484 . - . ID=Thaps30887;Parent=Thaps30887;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1385239 1385484 . - 0 ID=Thaps30887;Parent=Thaps30887;rank=1 chr1 . exon 1385239 1385484 . - . ID=Thaps30887.1;Parent=Thaps30887;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1392750 1396924 . + . ID=Thaps1393;biotype=protein_coding;description=Chromosomal protein%2Clike chromosomal protein xcap-e [Source:UniProtKB/TrEMBL%3BAcc:B8BQT7];external_name=CAP1;logic_name=jgi_thaps3 chr1 ensembl transcript 1392750 1396924 . + . ID=Thaps1393;Parent=Thaps1393;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1392750 1392814 . + 0 ID=Thaps1393;Parent=Thaps1393;rank=1 chr1 . exon 1392750 1392814 . + . ID=Thaps1393.1;Parent=Thaps1393;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1392982 1394209 . + 0 ID=Thaps1393;Parent=Thaps1393;rank=2 chr1 . exon 1392982 1394209 . + . ID=Thaps1393.2;Parent=Thaps1393;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1394300 1395451 . + 0 ID=Thaps1393;Parent=Thaps1393;rank=3 chr1 . exon 1394300 1395451 . + . ID=Thaps1393.3;Parent=Thaps1393;constitutive=1;rank=3 chr1 . CDS 1395538 1396032 . + 0 ID=Thaps1393;Parent=Thaps1393;rank=4 chr1 . exon 1395538 1396032 . + . ID=Thaps1393.4;Parent=Thaps1393;constitutive=1;rank=4 chr1 . CDS 1396126 1396626 . + 0 ID=Thaps1393;Parent=Thaps1393;rank=5 chr1 . exon 1396126 1396626 . + . ID=Thaps1393.5;Parent=Thaps1393;constitutive=1;rank=5 chr1 . CDS 1396712 1396924 . + 0 ID=Thaps1393;Parent=Thaps1393;rank=6 chr1 ensembl protein_coding_gene 1391692 1392279 . - . ID=Thaps20812;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQT6];external_name=Thaps20812;logic_name=jgi_thaps3 chr1 ensembl transcript 1391692 1392279 . - . ID=Thaps20812;Parent=Thaps20812;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1391692 1391823 . - 0 ID=Thaps20812;Parent=Thaps20812;rank=2 chr1 . exon 1391692 1391823 . - . ID=Thaps20812.2;Parent=Thaps20812;constitutive=1;rank=2 chr1 . CDS 1391965 1392279 . - 0 ID=Thaps20812;Parent=Thaps20812;rank=1 chr1 . exon 1391965 1392279 . - . ID=Thaps20812.1;Parent=Thaps20812;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1389320 1390264 . + . ID=Thaps30924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQT5];external_name=Thaps30924;logic_name=jgi_thaps3 chr1 ensembl transcript 1389320 1390264 . + . ID=Thaps30924;Parent=Thaps30924;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1389320 1389815 . + 0 ID=Thaps30924;Parent=Thaps30924;rank=1 chr1 . exon 1389320 1389815 . + . ID=Thaps30924.1;Parent=Thaps30924;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1389885 1390264 . + 0 ID=Thaps30924;Parent=Thaps30924;rank=2 chr1 . exon 1389885 1390264 . + . ID=Thaps30924.2;Parent=Thaps30924;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 1401037 1401123 . ? . description=trf chr1 . repeat_region 1406556 1406604 . ? . description=dust chr1 . repeat_region 1406557 1406604 . ? . description=trf chr1 . exon 1396712 1396924 . + . ID=Thaps1393.6;Parent=Thaps1393;constitutive=1;rank=6 chr1 ensembl protein_coding_gene 1397020 1398231 . - . ID=Thaps1394;biotype=protein_coding;description=Probable alcohol dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BQT8];external_name=ADH1;logic_name=jgi_thaps3 chr1 ensembl transcript 1397020 1398231 . - . ID=Thaps1394;Parent=Thaps1394;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1397020 1397039 . - 0 ID=Thaps1394;Parent=Thaps1394;rank=2 chr1 . exon 1397020 1397039 . - . ID=Thaps1394.2;Parent=Thaps1394;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1397076 1398231 . - 0 ID=Thaps1394;Parent=Thaps1394;rank=1 chr1 . exon 1397076 1398231 . - . ID=Thaps1394.1;Parent=Thaps1394;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1402247 1403923 . + . ID=Thaps1397;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQU1];external_name=Thaps1397;logic_name=jgi_thaps3 chr1 ensembl transcript 1402247 1403923 . + . ID=Thaps1397;Parent=Thaps1397;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1402247 1403923 . + 0 ID=Thaps1397;Parent=Thaps1397;rank=1 chr1 . exon 1402247 1403923 . + . ID=Thaps1397.1;Parent=Thaps1397;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1398563 1400032 . + . ID=Thaps20813;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQT9];external_name=Thaps20813;logic_name=jgi_thaps3 chr1 ensembl transcript 1398563 1400032 . + . ID=Thaps20813;Parent=Thaps20813;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1398563 1398612 . + 0 ID=Thaps20813;Parent=Thaps20813;rank=1 chr1 . exon 1398563 1398612 . + . ID=Thaps20813.1;Parent=Thaps20813;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1398829 1400032 . + 0 ID=Thaps20813;Parent=Thaps20813;rank=2 chr1 . exon 1398829 1400032 . + . ID=Thaps20813.2;Parent=Thaps20813;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1400330 1401346 . + . ID=Thaps20814;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQU0];external_name=Thaps20814;logic_name=jgi_thaps3 chr1 ensembl transcript 1400330 1401346 . + . ID=Thaps20814;Parent=Thaps20814;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1400330 1401346 . + 0 ID=Thaps20814;Parent=Thaps20814;rank=1 chr1 . exon 1400330 1401346 . + . ID=Thaps20814.1;Parent=Thaps20814;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1404596 1405723 . + . ID=Thaps31383;biotype=protein_coding;description=Glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BQU2];external_name=GAPD1;logic_name=jgi_thaps3 chr1 ensembl transcript 1404596 1405723 . + . ID=Thaps31383;Parent=Thaps31383;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1404596 1405723 . + 0 ID=Thaps31383;Parent=Thaps31383;rank=1 chr1 . exon 1404596 1405723 . + . ID=Thaps31383.1;Parent=Thaps31383;constitutive=1;rank=1 chr1 . repeat_region 1415876 1416568 . - . description=Harbinger2N_TP chr1 ensembl gene 1409970 1410583 . + . ID=Thaps260933;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 1409970 1410583 . + . ID=Thaps260933;Parent=Thaps260933;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 1409970 1410168 . + . ID=Thaps260933.1;Parent=Thaps260933;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . exon 1410247 1410387 . + . ID=Thaps260933.2;Parent=Thaps260933;constitutive=1;rank=2 chr1 . exon 1410496 1410583 . + . ID=Thaps260933.3;Parent=Thaps260933;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 1412511 1413824 . - . ID=Thaps260934;biotype=protein_coding;description=Branched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQU4];external_name=Thaps260934;logic_name=jgi_thaps3 chr1 ensembl transcript 1412511 1413824 . - . ID=Thaps260934;Parent=Thaps260934;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1412511 1412851 . - 0 ID=Thaps260934;Parent=Thaps260934;rank=3 chr1 . exon 1412511 1412851 . - . ID=Thaps260934.3;Parent=Thaps260934;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1412903 1413109 . - 0 ID=Thaps260934;Parent=Thaps260934;rank=2 chr1 . exon 1412903 1413109 . - . ID=Thaps260934.2;Parent=Thaps260934;constitutive=1;rank=2 chr1 . CDS 1413214 1413824 . - 0 ID=Thaps260934;Parent=Thaps260934;rank=1 chr1 . exon 1413214 1413824 . - . ID=Thaps260934.1;Parent=Thaps260934;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1406725 1409004 . + . ID=Thaps26678;biotype=protein_coding;description=Transketolase [Source:UniProtKB/TrEMBL%3BAcc:B8BQU3];external_name=TKT1;logic_name=jgi_thaps3 chr1 ensembl transcript 1406725 1409004 . + . ID=Thaps26678;Parent=Thaps26678;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1406725 1407133 . + 0 ID=Thaps26678;Parent=Thaps26678;rank=1 chr1 . exon 1406725 1407133 . + . ID=Thaps26678.1;Parent=Thaps26678;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1407254 1409004 . + 0 ID=Thaps26678;Parent=Thaps26678;rank=2 chr1 . exon 1407254 1409004 . + . ID=Thaps26678.2;Parent=Thaps26678;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 1416682 1416752 . ? . description=trf chr1 . repeat_region 1416721 1416786 . ? . description=trf chr1 . biological_region 1418580 1418583 0.999 + . logic_name=eponine chr1 . repeat_region 1420087 1420253 . - . description=Harbinger3_TP chr1 ensembl protein_coding_gene 1417159 1418702 . - . ID=Thaps20816;biotype=protein_coding;description=Branched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQU5];external_name=Thaps20816;logic_name=jgi_thaps3 chr1 ensembl transcript 1417159 1418702 . - . ID=Thaps20816;Parent=Thaps20816;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1417159 1417759 . - 0 ID=Thaps20816;Parent=Thaps20816;rank=3 chr1 . exon 1417159 1417759 . - . ID=Thaps20816.3;Parent=Thaps20816;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1417864 1417982 . - 0 ID=Thaps20816;Parent=Thaps20816;rank=2 chr1 . exon 1417864 1417982 . - . ID=Thaps20816.2;Parent=Thaps20816;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1418010 1418702 . - 0 ID=Thaps20816;Parent=Thaps20816;rank=1 chr1 . exon 1418010 1418702 . - . ID=Thaps20816.1;Parent=Thaps20816;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1423924 1425963 . + . ID=Thaps20817;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQU8];external_name=Thaps20817;logic_name=jgi_thaps3 chr1 ensembl transcript 1423924 1425963 . + . ID=Thaps20817;Parent=Thaps20817;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1423924 1425963 . + 0 ID=Thaps20817;Parent=Thaps20817;rank=1 chr1 . exon 1423924 1425963 . + . ID=Thaps20817.1;Parent=Thaps20817;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1419165 1419927 . + . ID=Thaps260936;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQU6];external_name=Thaps260936;logic_name=jgi_thaps3 chr1 ensembl transcript 1419165 1419927 . + . ID=Thaps260936;Parent=Thaps260936;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1419165 1419556 . + 0 ID=Thaps260936;Parent=Thaps260936;rank=1 chr1 . exon 1419165 1419556 . + . ID=Thaps260936.1;Parent=Thaps260936;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1419645 1419927 . + 0 ID=Thaps260936;Parent=Thaps260936;rank=2 chr1 . exon 1419645 1419927 . + . ID=Thaps260936.2;Parent=Thaps260936;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1422778 1423549 . - . ID=Thaps260937;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQU7];external_name=Thaps260937;logic_name=jgi_thaps3 chr1 ensembl transcript 1422778 1423549 . - . ID=Thaps260937;Parent=Thaps260937;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1422778 1423114 . - 0 ID=Thaps260937;Parent=Thaps260937;rank=3 chr1 . exon 1422778 1423114 . - . ID=Thaps260937.3;Parent=Thaps260937;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1423139 1423369 . - 0 ID=Thaps260937;Parent=Thaps260937;rank=2 chr1 . exon 1423139 1423369 . - . ID=Thaps260937.2;Parent=Thaps260937;constitutive=1;rank=2 chr1 . CDS 1423480 1423549 . - 0 ID=Thaps260937;Parent=Thaps260937;rank=1 chr1 . exon 1423480 1423549 . - . ID=Thaps260937.1;Parent=Thaps260937;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1426094 1428733 . - . ID=Thaps30969;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQU9];external_name=Thaps30969;logic_name=jgi_thaps3 chr1 ensembl transcript 1426094 1428733 . - . ID=Thaps30969;Parent=Thaps30969;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1426094 1426505 . - 0 ID=Thaps30969;Parent=Thaps30969;rank=4 chr1 . exon 1426094 1426505 . - . ID=Thaps30969.4;Parent=Thaps30969;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 1426683 1427217 . - 0 ID=Thaps30969;Parent=Thaps30969;rank=3 chr1 . CDS 1427620 1427803 . - 0 ID=Thaps30969;Parent=Thaps30969;rank=2 chr1 . CDS 1428605 1428733 . - 0 ID=Thaps30969;Parent=Thaps30969;rank=1 chr1 ensembl protein_coding_gene 1430874 1431410 . - . ID=Thaps1407;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQV0];external_name=Thaps1407;logic_name=jgi_thaps3 chr1 ensembl transcript 1430874 1431410 . - . ID=Thaps1407;Parent=Thaps1407;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1430874 1431410 . - 0 ID=Thaps1407;Parent=Thaps1407;rank=1 chr1 . exon 1430874 1431410 . - . ID=Thaps1407.1;Parent=Thaps1407;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1431845 1433886 . + . ID=Thaps1408;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQV1];external_name=Thaps1408;logic_name=jgi_thaps3 chr1 ensembl transcript 1431845 1433886 . + . ID=Thaps1408;Parent=Thaps1408;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1431845 1433206 . + 0 ID=Thaps1408;Parent=Thaps1408;rank=1 chr1 . exon 1431845 1433206 . + . ID=Thaps1408.1;Parent=Thaps1408;constitutive=1;rank=1 chr1 . CDS 1433284 1433886 . + 0 ID=Thaps1408;Parent=Thaps1408;rank=2 chr1 . exon 1433284 1433886 . + . ID=Thaps1408.2;Parent=Thaps1408;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1435469 1436143 . + . ID=Thaps20819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQV3];external_name=Thaps20819;logic_name=jgi_thaps3 chr1 ensembl transcript 1435469 1436143 . + . ID=Thaps20819;Parent=Thaps20819;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1435469 1436143 . + 0 ID=Thaps20819;Parent=Thaps20819;rank=1 chr1 . exon 1435469 1436143 . + . ID=Thaps20819.1;Parent=Thaps20819;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1434216 1434813 . + . ID=Thaps260939;biotype=protein_coding;description=Dual specificity protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BQV2];external_name=Thaps260939;logic_name=jgi_thaps3 chr1 ensembl transcript 1434216 1434813 . + . ID=Thaps260939;Parent=Thaps260939;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1434216 1434329 . + 0 ID=Thaps260939;Parent=Thaps260939;rank=1 chr1 . exon 1434216 1434329 . + . ID=Thaps260939.1;Parent=Thaps260939;constitutive=1;rank=1 chr1 . CDS 1434372 1434539 . + 0 ID=Thaps260939;Parent=Thaps260939;rank=2 chr1 . exon 1434372 1434539 . + . ID=Thaps260939.2;Parent=Thaps260939;constitutive=1;rank=2 chr1 . CDS 1434709 1434813 . + 0 ID=Thaps260939;Parent=Thaps260939;rank=3 chr1 . exon 1434709 1434813 . + . ID=Thaps260939.3;Parent=Thaps260939;constitutive=1;rank=3 chr1 . exon 1426683 1427217 . - . ID=Thaps30969.3;Parent=Thaps30969;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . exon 1427620 1427803 . - . ID=Thaps30969.2;Parent=Thaps30969;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 1428605 1428733 . - . ID=Thaps30969.1;Parent=Thaps30969;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1442388 1443041 . + . ID=Thaps1412;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQV6];external_name=Thaps1412;logic_name=jgi_thaps3 chr1 ensembl transcript 1442388 1443041 . + . ID=Thaps1412;Parent=Thaps1412;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1442388 1442432 . + 0 ID=Thaps1412;Parent=Thaps1412;rank=1 chr1 . exon 1442388 1442432 . + . ID=Thaps1412.1;Parent=Thaps1412;constitutive=1;rank=1 chr1 . CDS 1442523 1443041 . + 0 ID=Thaps1412;Parent=Thaps1412;rank=2 chr1 . exon 1442523 1443041 . + . ID=Thaps1412.2;Parent=Thaps1412;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1443169 1443872 . - . ID=Thaps260941;biotype=protein_coding;description=Cdp-alcohol phosphatidyl transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BQV7];external_name=Thaps260941;logic_name=jgi_thaps3 chr1 ensembl transcript 1443169 1443872 . - . ID=Thaps260941;Parent=Thaps260941;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1443169 1443673 . - 0 ID=Thaps260941;Parent=Thaps260941;rank=2 chr1 . exon 1443169 1443673 . - . ID=Thaps260941.2;Parent=Thaps260941;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1443782 1443872 . - 0 ID=Thaps260941;Parent=Thaps260941;rank=1 chr1 . exon 1443782 1443872 . - . ID=Thaps260941.1;Parent=Thaps260941;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1444687 1445395 . - . ID=Thaps260942;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQV8];external_name=Thaps260942;logic_name=jgi_thaps3 chr1 ensembl transcript 1444687 1445395 . - . ID=Thaps260942;Parent=Thaps260942;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1444687 1444862 . - 0 ID=Thaps260942;Parent=Thaps260942;rank=3 chr1 . exon 1444687 1444862 . - . ID=Thaps260942.3;Parent=Thaps260942;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1445018 1445179 . - 0 ID=Thaps260942;Parent=Thaps260942;rank=2 chr1 . exon 1445018 1445179 . - . ID=Thaps260942.2;Parent=Thaps260942;constitutive=1;rank=2 chr1 . CDS 1445285 1445395 . - 0 ID=Thaps260942;Parent=Thaps260942;rank=1 chr1 . exon 1445285 1445395 . - . ID=Thaps260942.1;Parent=Thaps260942;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1446273 1447010 . + . ID=Thaps30960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQV9];external_name=Thaps30960;logic_name=jgi_thaps3 chr1 ensembl transcript 1446273 1447010 . + . ID=Thaps30960;Parent=Thaps30960;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1446273 1446680 . + 0 ID=Thaps30960;Parent=Thaps30960;rank=1 chr1 . exon 1446273 1446680 . + . ID=Thaps30960.1;Parent=Thaps30960;constitutive=1;rank=1 chr1 . CDS 1446780 1447010 . + 0 ID=Thaps30960;Parent=Thaps30960;rank=2 chr1 ensembl protein_coding_gene 1440158 1440988 . - . ID=Thaps30990;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQV5];external_name=Thaps30990;logic_name=jgi_thaps3 chr1 ensembl transcript 1440158 1440988 . - . ID=Thaps30990;Parent=Thaps30990;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1440158 1440726 . - 0 ID=Thaps30990;Parent=Thaps30990;rank=2 chr1 . exon 1440158 1440726 . - . ID=Thaps30990.2;Parent=Thaps30990;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1440817 1440988 . - 0 ID=Thaps30990;Parent=Thaps30990;rank=1 chr1 . exon 1440817 1440988 . - . ID=Thaps30990.1;Parent=Thaps30990;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1438541 1439161 . + . ID=Thaps31046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQV4];external_name=Thaps31046;logic_name=jgi_thaps3 chr1 ensembl transcript 1438541 1439161 . + . ID=Thaps31046;Parent=Thaps31046;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1438541 1438739 . + 0 ID=Thaps31046;Parent=Thaps31046;rank=1 chr1 . exon 1438541 1438739 . + . ID=Thaps31046.1;Parent=Thaps31046;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1438833 1439161 . + 0 ID=Thaps31046;Parent=Thaps31046;rank=2 chr1 . exon 1438833 1439161 . + . ID=Thaps31046.2;Parent=Thaps31046;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 1450332 1450340 . ? . description=dust chr1 . repeat_region 1452894 1452908 . ? . description=dust chr1 . repeat_region 1453406 1453434 . ? . description=trf chr1 . repeat_region 1453406 1453434 . ? . description=dust chr1 ensembl protein_coding_gene 1448461 1449455 . - . ID=Thaps1415;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQW0];external_name=Thaps1415;logic_name=jgi_thaps3 chr1 ensembl transcript 1448461 1449455 . - . ID=Thaps1415;Parent=Thaps1415;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1448461 1448643 . - 0 ID=Thaps1415;Parent=Thaps1415;rank=2 chr1 . exon 1448461 1448643 . - . ID=Thaps1415.2;Parent=Thaps1415;constitutive=1;rank=2 chr1 . CDS 1448736 1449455 . - 0 ID=Thaps1415;Parent=Thaps1415;rank=1 chr1 . exon 1448736 1449455 . - . ID=Thaps1415.1;Parent=Thaps1415;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1453442 1454995 . + . ID=Thaps1417;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQW3];external_name=Thaps1417;logic_name=jgi_thaps3 chr1 ensembl transcript 1453442 1454995 . + . ID=Thaps1417;Parent=Thaps1417;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1453442 1454995 . + 0 ID=Thaps1417;Parent=Thaps1417;rank=1 chr1 . exon 1453442 1454995 . + . ID=Thaps1417.1;Parent=Thaps1417;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1455135 1456030 . - . ID=Thaps1418;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQW4];external_name=Thaps1418;logic_name=jgi_thaps3 chr1 ensembl transcript 1455135 1456030 . - . ID=Thaps1418;Parent=Thaps1418;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1455135 1455543 . - 0 ID=Thaps1418;Parent=Thaps1418;rank=2 chr1 . exon 1455135 1455543 . - . ID=Thaps1418.2;Parent=Thaps1418;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1455654 1456030 . - 0 ID=Thaps1418;Parent=Thaps1418;rank=1 chr1 . exon 1455654 1456030 . - . ID=Thaps1418.1;Parent=Thaps1418;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1450527 1452071 . + . ID=Thaps260943;biotype=protein_coding;description=Transcription factor of TFIIH family [Source:UniProtKB/TrEMBL%3BAcc:B8BQW1];external_name=Thaps260943;logic_name=jgi_thaps3 chr1 ensembl transcript 1450527 1452071 . + . ID=Thaps260943;Parent=Thaps260943;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1450527 1450824 . + 0 ID=Thaps260943;Parent=Thaps260943;rank=1 chr1 . exon 1450527 1450824 . + . ID=Thaps260943.1;Parent=Thaps260943;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1450885 1451000 . + 0 ID=Thaps260943;Parent=Thaps260943;rank=2 chr1 . exon 1450885 1451000 . + . ID=Thaps260943.2;Parent=Thaps260943;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1451073 1451616 . + 0 ID=Thaps260943;Parent=Thaps260943;rank=3 chr1 . exon 1451073 1451616 . + . ID=Thaps260943.3;Parent=Thaps260943;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1451647 1452071 . + 0 ID=Thaps260943;Parent=Thaps260943;rank=4 chr1 . exon 1451647 1452071 . + . ID=Thaps260943.4;Parent=Thaps260943;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 1446780 1447010 . + . ID=Thaps30960.2;Parent=Thaps30960;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1452306 1452881 . - . ID=Thaps30971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQW2];external_name=Thaps30971;logic_name=jgi_thaps3 chr1 ensembl transcript 1452306 1452881 . - . ID=Thaps30971;Parent=Thaps30971;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1452306 1452881 . - 0 ID=Thaps30971;Parent=Thaps30971;rank=1 chr1 . exon 1452306 1452881 . - . ID=Thaps30971.1;Parent=Thaps30971;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1459781 1461337 . + . ID=Thaps1420;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQW6];external_name=Thaps1420;logic_name=jgi_thaps3 chr1 ensembl transcript 1459781 1461337 . + . ID=Thaps1420;Parent=Thaps1420;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1459781 1460887 . + 0 ID=Thaps1420;Parent=Thaps1420;rank=1 chr1 . exon 1459781 1460887 . + . ID=Thaps1420.1;Parent=Thaps1420;constitutive=1;rank=1 chr1 . CDS 1460978 1461337 . + 0 ID=Thaps1420;Parent=Thaps1420;rank=2 chr1 . exon 1460978 1461337 . + . ID=Thaps1420.2;Parent=Thaps1420;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1465344 1468620 . + . ID=Thaps1422;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQW8];external_name=Thaps1422;logic_name=jgi_thaps3 chr1 ensembl transcript 1465344 1468620 . + . ID=Thaps1422;Parent=Thaps1422;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1465344 1466341 . + 0 ID=Thaps1422;Parent=Thaps1422;rank=1 chr1 . exon 1465344 1466341 . + . ID=Thaps1422.1;Parent=Thaps1422;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1466418 1468620 . + 0 ID=Thaps1422;Parent=Thaps1422;rank=2 chr1 . exon 1466418 1468620 . + . ID=Thaps1422.2;Parent=Thaps1422;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1456838 1458497 . - . ID=Thaps20821;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQW5];external_name=Thaps20821;logic_name=jgi_thaps3 chr1 ensembl transcript 1456838 1458497 . - . ID=Thaps20821;Parent=Thaps20821;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1456838 1456950 . - 0 ID=Thaps20821;Parent=Thaps20821;rank=3 chr1 . exon 1456838 1456950 . - . ID=Thaps20821.3;Parent=Thaps20821;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1457085 1458255 . - 0 ID=Thaps20821;Parent=Thaps20821;rank=2 chr1 . exon 1457085 1458255 . - . ID=Thaps20821.2;Parent=Thaps20821;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1458354 1458497 . - 0 ID=Thaps20821;Parent=Thaps20821;rank=1 chr1 . exon 1458354 1458497 . - . ID=Thaps20821.1;Parent=Thaps20821;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1462893 1463693 . + . ID=Thaps31034;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BQW7];external_name=Thaps31034;logic_name=jgi_thaps3 chr1 ensembl transcript 1462893 1463693 . + . ID=Thaps31034;Parent=Thaps31034;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1462893 1462978 . + 0 ID=Thaps31034;Parent=Thaps31034;rank=1 chr1 . exon 1462893 1462978 . + . ID=Thaps31034.1;Parent=Thaps31034;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1463113 1463215 . + 0 ID=Thaps31034;Parent=Thaps31034;rank=2 chr1 . exon 1463113 1463215 . + . ID=Thaps31034.2;Parent=Thaps31034;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1463306 1463331 . + 0 ID=Thaps31034;Parent=Thaps31034;rank=3 chr1 . exon 1463306 1463331 . + . ID=Thaps31034.3;Parent=Thaps31034;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1463429 1463693 . + 0 ID=Thaps31034;Parent=Thaps31034;rank=4 chr1 . exon 1463429 1463693 . + . ID=Thaps31034.4;Parent=Thaps31034;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . repeat_region 1469712 1469750 . ? . description=trf chr1 . repeat_region 1469712 1469750 . ? . description=dust chr1 . repeat_region 1473428 1473446 . ? . description=dust chr1 ensembl protein_coding_gene 1473874 1475431 . + . ID=Thaps1426;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQX2];external_name=Thaps1426;logic_name=jgi_thaps3 chr1 ensembl transcript 1473874 1475431 . + . ID=Thaps1426;Parent=Thaps1426;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1473874 1474007 . + 0 ID=Thaps1426;Parent=Thaps1426;rank=1 chr1 . exon 1473874 1474007 . + . ID=Thaps1426.1;Parent=Thaps1426;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1474084 1474534 . + 0 ID=Thaps1426;Parent=Thaps1426;rank=2 chr1 . exon 1474084 1474534 . + . ID=Thaps1426.2;Parent=Thaps1426;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1474628 1475431 . + 0 ID=Thaps1426;Parent=Thaps1426;rank=3 chr1 . exon 1474628 1475431 . + . ID=Thaps1426.3;Parent=Thaps1426;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1471727 1473397 . - . ID=Thaps20823;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQX1];external_name=Thaps20823;logic_name=jgi_thaps3 chr1 ensembl transcript 1471727 1473397 . - . ID=Thaps20823;Parent=Thaps20823;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1471727 1473397 . - 0 ID=Thaps20823;Parent=Thaps20823;rank=1 chr1 . exon 1471727 1473397 . - . ID=Thaps20823.1;Parent=Thaps20823;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1475800 1477140 . - . ID=Thaps20824;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQX3];external_name=Thaps20824;logic_name=jgi_thaps3 chr1 ensembl transcript 1475800 1477140 . - . ID=Thaps20824;Parent=Thaps20824;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1475800 1477140 . - 0 ID=Thaps20824;Parent=Thaps20824;rank=1 chr1 . exon 1475800 1477140 . - . ID=Thaps20824.1;Parent=Thaps20824;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1470221 1471462 . + . ID=Thaps26686;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQX0];external_name=Thaps26686;logic_name=jgi_thaps3 chr1 ensembl transcript 1470221 1471462 . + . ID=Thaps26686;Parent=Thaps26686;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1470221 1470223 . + 0 ID=Thaps26686;Parent=Thaps26686;rank=1 chr1 . exon 1470221 1470223 . + . ID=Thaps26686.1;Parent=Thaps26686;constitutive=1;rank=1 chr1 . CDS 1470476 1471462 . + 0 ID=Thaps26686;Parent=Thaps26686;rank=2 chr1 . exon 1470476 1471462 . + . ID=Thaps26686.2;Parent=Thaps26686;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1468764 1469924 . - . ID=Thaps268024;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQW9];external_name=Thaps268024;logic_name=jgi_thaps3 chr1 ensembl transcript 1468764 1469924 . - . ID=Thaps268024;Parent=Thaps268024;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1468764 1469924 . - 0 ID=Thaps268024;Parent=Thaps268024;rank=1 chr1 . exon 1468764 1469924 . - . ID=Thaps268024.1;Parent=Thaps268024;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1478091 1478456 . + . ID=Thaps1428;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQX4];external_name=Thaps1428;logic_name=jgi_thaps3 chr1 ensembl transcript 1478091 1478456 . + . ID=Thaps1428;Parent=Thaps1428;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1478091 1478456 . + 0 ID=Thaps1428;Parent=Thaps1428;rank=1 chr1 . exon 1478091 1478456 . + . ID=Thaps1428.1;Parent=Thaps1428;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1478656 1479696 . - . ID=Thaps1429;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQX5];external_name=Thaps1429;logic_name=jgi_thaps3 chr1 ensembl transcript 1478656 1479696 . - . ID=Thaps1429;Parent=Thaps1429;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1478656 1479696 . - 0 ID=Thaps1429;Parent=Thaps1429;rank=1 chr1 . exon 1478656 1479696 . - . ID=Thaps1429.1;Parent=Thaps1429;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1485740 1487461 . + . ID=Thaps20825;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQX8];external_name=Thaps20825;logic_name=jgi_thaps3 chr1 ensembl transcript 1485740 1487461 . + . ID=Thaps20825;Parent=Thaps20825;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1485740 1487461 . + 0 ID=Thaps20825;Parent=Thaps20825;rank=1 chr1 . exon 1485740 1487461 . + . ID=Thaps20825.1;Parent=Thaps20825;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1484365 1485398 . + . ID=Thaps31223;biotype=protein_coding;description=Phosphatidylinositol 4-kinase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQX7];external_name=Thaps31223;logic_name=jgi_thaps3 chr1 ensembl transcript 1484365 1485398 . + . ID=Thaps31223;Parent=Thaps31223;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1484365 1484745 . + 0 ID=Thaps31223;Parent=Thaps31223;rank=1 chr1 . exon 1484365 1484745 . + . ID=Thaps31223.1;Parent=Thaps31223;constitutive=1;rank=1 chr1 . CDS 1484828 1484918 . + 0 ID=Thaps31223;Parent=Thaps31223;rank=2 chr1 . exon 1484828 1484918 . + . ID=Thaps31223.2;Parent=Thaps31223;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1485001 1485398 . + 0 ID=Thaps31223;Parent=Thaps31223;rank=3 chr1 . exon 1485001 1485398 . + . ID=Thaps31223.3;Parent=Thaps31223;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1479940 1480140 . - . ID=Thaps31277;biotype=protein_coding;description=RS30%2C ribosomal protein 30 40S small ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BQX6];external_name=RS30;logic_name=jgi_thaps3 chr1 ensembl transcript 1479940 1480140 . - . ID=Thaps31277;Parent=Thaps31277;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1479940 1480140 . - 0 ID=Thaps31277;Parent=Thaps31277;rank=1 chr1 . exon 1479940 1480140 . - . ID=Thaps31277.1;Parent=Thaps31277;constitutive=1;rank=1 chr1 . repeat_region 1488886 1488893 . ? . description=dust chr1 . repeat_region 1496118 1496182 . ? . description=trf chr1 . repeat_region 1496224 1496252 . ? . description=trf chr1 ensembl protein_coding_gene 1487861 1488570 . - . ID=Thaps1432;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQX9];external_name=Thaps1432;logic_name=jgi_thaps3 chr1 ensembl transcript 1487861 1488570 . - . ID=Thaps1432;Parent=Thaps1432;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1487861 1488258 . - 0 ID=Thaps1432;Parent=Thaps1432;rank=2 chr1 . exon 1487861 1488258 . - . ID=Thaps1432.2;Parent=Thaps1432;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1488384 1488570 . - 0 ID=Thaps1432;Parent=Thaps1432;rank=1 chr1 . exon 1488384 1488570 . - . ID=Thaps1432.1;Parent=Thaps1432;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1489956 1490171 . + . ID=Thaps31142;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQY0];external_name=Thaps31142;logic_name=jgi_thaps3 chr1 ensembl transcript 1489956 1490171 . + . ID=Thaps31142;Parent=Thaps31142;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1489956 1490171 . + 0 ID=Thaps31142;Parent=Thaps31142;rank=1 chr1 . exon 1489956 1490171 . + . ID=Thaps31142.1;Parent=Thaps31142;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1504409 1506764 . + . ID=Thaps1436;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQY3];external_name=Thaps1436;logic_name=jgi_thaps3 chr1 ensembl transcript 1504409 1506764 . + . ID=Thaps1436;Parent=Thaps1436;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1504409 1504472 . + 0 ID=Thaps1436;Parent=Thaps1436;rank=1 chr1 . exon 1504409 1504472 . + . ID=Thaps1436.1;Parent=Thaps1436;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1504752 1504992 . + 0 ID=Thaps1436;Parent=Thaps1436;rank=2 chr1 . exon 1504752 1504992 . + . ID=Thaps1436.2;Parent=Thaps1436;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1505070 1506085 . + 0 ID=Thaps1436;Parent=Thaps1436;rank=3 chr1 . exon 1505070 1506085 . + . ID=Thaps1436.3;Parent=Thaps1436;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1506211 1506764 . + 0 ID=Thaps1436;Parent=Thaps1436;rank=4 chr1 . exon 1506211 1506764 . + . ID=Thaps1436.4;Parent=Thaps1436;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 1497848 1499311 . - . ID=Thaps20827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQY1];external_name=Thaps20827;logic_name=jgi_thaps3 chr1 ensembl transcript 1497848 1499311 . - . ID=Thaps20827;Parent=Thaps20827;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1497848 1497944 . - 0 ID=Thaps20827;Parent=Thaps20827;rank=3 chr1 . exon 1497848 1497944 . - . ID=Thaps20827.3;Parent=Thaps20827;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1498032 1498373 . - 0 ID=Thaps20827;Parent=Thaps20827;rank=2 chr1 . exon 1498032 1498373 . - . ID=Thaps20827.2;Parent=Thaps20827;constitutive=1;rank=2 chr1 . CDS 1498449 1499311 . - 0 ID=Thaps20827;Parent=Thaps20827;rank=1 chr1 . exon 1498449 1499311 . - . ID=Thaps20827.1;Parent=Thaps20827;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1499913 1504169 . + . ID=Thaps20828;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQY2];external_name=Thaps20828;logic_name=jgi_thaps3 chr1 ensembl transcript 1499913 1504169 . + . ID=Thaps20828;Parent=Thaps20828;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1499913 1500788 . + 0 ID=Thaps20828;Parent=Thaps20828;rank=1 chr1 . exon 1499913 1500788 . + . ID=Thaps20828.1;Parent=Thaps20828;constitutive=1;rank=1 chr1 . CDS 1500878 1503289 . + 0 ID=Thaps20828;Parent=Thaps20828;rank=2 chr1 . exon 1500878 1503289 . + . ID=Thaps20828.2;Parent=Thaps20828;constitutive=1;rank=2 chr1 . CDS 1503359 1503566 . + 0 ID=Thaps20828;Parent=Thaps20828;rank=3 chr1 . exon 1503359 1503566 . + . ID=Thaps20828.3;Parent=Thaps20828;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1503645 1503905 . + 0 ID=Thaps20828;Parent=Thaps20828;rank=4 chr1 . exon 1503645 1503905 . + . ID=Thaps20828.4;Parent=Thaps20828;constitutive=1;rank=4 chr1 . CDS 1503988 1504169 . + 0 ID=Thaps20828;Parent=Thaps20828;rank=5 chr1 . exon 1503988 1504169 . + . ID=Thaps20828.5;Parent=Thaps20828;constitutive=1;ensembl_end_phase=2;rank=5 chr1 ensembl protein_coding_gene 1514937 1515830 . - . ID=Thaps1440;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQY7];external_name=Thaps1440;logic_name=jgi_thaps3 chr1 ensembl transcript 1514937 1515830 . - . ID=Thaps1440;Parent=Thaps1440;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1514937 1515830 . - 0 ID=Thaps1440;Parent=Thaps1440;rank=1 chr1 . exon 1514937 1515830 . - . ID=Thaps1440.1;Parent=Thaps1440;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1506853 1508995 . - . ID=Thaps20829;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQY4];external_name=Thaps20829;logic_name=jgi_thaps3 chr1 ensembl transcript 1506853 1508995 . - . ID=Thaps20829;Parent=Thaps20829;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1506853 1507072 . - 0 ID=Thaps20829;Parent=Thaps20829;rank=6 chr1 . exon 1506853 1507072 . - . ID=Thaps20829.6;Parent=Thaps20829;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 1507141 1507455 . - 0 ID=Thaps20829;Parent=Thaps20829;rank=5 chr1 . exon 1507141 1507455 . - . ID=Thaps20829.5;Parent=Thaps20829;constitutive=1;rank=5 chr1 . CDS 1507524 1508062 . - 0 ID=Thaps20829;Parent=Thaps20829;rank=4 chr1 . exon 1507524 1508062 . - . ID=Thaps20829.4;Parent=Thaps20829;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1508171 1508545 . - 0 ID=Thaps20829;Parent=Thaps20829;rank=3 chr1 . exon 1508171 1508545 . - . ID=Thaps20829.3;Parent=Thaps20829;constitutive=1;rank=3 chr1 . CDS 1508584 1508604 . - 0 ID=Thaps20829;Parent=Thaps20829;rank=2 chr1 . exon 1508584 1508604 . - . ID=Thaps20829.2;Parent=Thaps20829;constitutive=1;rank=2 chr1 . CDS 1508687 1508995 . - 0 ID=Thaps20829;Parent=Thaps20829;rank=1 chr1 . exon 1508687 1508995 . - . ID=Thaps20829.1;Parent=Thaps20829;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1513386 1514530 . - . ID=Thaps20831;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQY6];external_name=Thaps20831;logic_name=jgi_thaps3 chr1 ensembl transcript 1513386 1514530 . - . ID=Thaps20831;Parent=Thaps20831;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1513386 1513633 . - 0 ID=Thaps20831;Parent=Thaps20831;rank=2 chr1 . exon 1513386 1513633 . - . ID=Thaps20831.2;Parent=Thaps20831;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1513669 1514530 . - 0 ID=Thaps20831;Parent=Thaps20831;rank=1 chr1 . exon 1513669 1514530 . - . ID=Thaps20831.1;Parent=Thaps20831;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1516205 1519147 . + . ID=Thaps20832;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQY8];external_name=Thaps20832;logic_name=jgi_thaps3 chr1 ensembl transcript 1516205 1519147 . + . ID=Thaps20832;Parent=Thaps20832;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1516205 1516685 . + 0 ID=Thaps20832;Parent=Thaps20832;rank=1 chr1 . exon 1516205 1516685 . + . ID=Thaps20832.1;Parent=Thaps20832;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1516784 1517065 . + 0 ID=Thaps20832;Parent=Thaps20832;rank=2 chr1 . CDS 1517143 1517896 . + 0 ID=Thaps20832;Parent=Thaps20832;rank=3 chr1 . CDS 1517981 1518126 . + 0 ID=Thaps20832;Parent=Thaps20832;rank=4 chr1 . CDS 1518575 1518986 . + 0 ID=Thaps20832;Parent=Thaps20832;rank=5 chr1 . CDS 1519075 1519147 . + 0 ID=Thaps20832;Parent=Thaps20832;rank=6 chr1 ensembl protein_coding_gene 1510055 1511812 . - . ID=Thaps268027;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQY5];external_name=Thaps268027;logic_name=jgi_thaps3 chr1 ensembl transcript 1510055 1511812 . - . ID=Thaps268027;Parent=Thaps268027;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1510055 1510744 . - 0 ID=Thaps268027;Parent=Thaps268027;rank=4 chr1 . exon 1510055 1510744 . - . ID=Thaps268027.4;Parent=Thaps268027;constitutive=1;rank=4 chr1 . CDS 1510799 1510894 . - 0 ID=Thaps268027;Parent=Thaps268027;rank=3 chr1 . exon 1510799 1510894 . - . ID=Thaps268027.3;Parent=Thaps268027;constitutive=1;rank=3 chr1 . CDS 1511030 1511252 . - 0 ID=Thaps268027;Parent=Thaps268027;rank=2 chr1 . exon 1511030 1511252 . - . ID=Thaps268027.2;Parent=Thaps268027;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1511379 1511812 . - 0 ID=Thaps268027;Parent=Thaps268027;rank=1 chr1 . exon 1511379 1511812 . - . ID=Thaps268027.1;Parent=Thaps268027;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 1519516 1519666 . + . description=TE2a_TP chr1 . exon 1516784 1517065 . + . ID=Thaps20832.2;Parent=Thaps20832;constitutive=1;rank=2 chr1 . exon 1517143 1517896 . + . ID=Thaps20832.3;Parent=Thaps20832;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . exon 1517981 1518126 . + . ID=Thaps20832.4;Parent=Thaps20832;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 1518575 1518986 . + . ID=Thaps20832.5;Parent=Thaps20832;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . exon 1519075 1519147 . + . ID=Thaps20832.6;Parent=Thaps20832;constitutive=1;ensembl_end_phase=1;rank=6 chr1 ensembl protein_coding_gene 1525824 1526895 . + . ID=Thaps260953;biotype=protein_coding;description=Ornithine cyclodeaminase [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ0];external_name=Thaps260953;logic_name=jgi_thaps3 chr1 ensembl transcript 1525824 1526895 . + . ID=Thaps260953;Parent=Thaps260953;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1525824 1526895 . + 0 ID=Thaps260953;Parent=Thaps260953;rank=1 chr1 . exon 1525824 1526895 . + . ID=Thaps260953.1;Parent=Thaps260953;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1522226 1523467 . + . ID=Thaps31216;biotype=protein_coding;description=Oxononanoate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BQY9];external_name=Thaps31216;logic_name=jgi_thaps3 chr1 ensembl transcript 1522226 1523467 . + . ID=Thaps31216;Parent=Thaps31216;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1522226 1522806 . + 0 ID=Thaps31216;Parent=Thaps31216;rank=1 chr1 . exon 1522226 1522806 . + . ID=Thaps31216.1;Parent=Thaps31216;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1522981 1523467 . + 0 ID=Thaps31216;Parent=Thaps31216;rank=2 chr1 . exon 1522981 1523467 . + . ID=Thaps31216.2;Parent=Thaps31216;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . repeat_region 1535728 1535735 . ? . description=dust chr1 ensembl protein_coding_gene 1527155 1528375 . - . ID=Thaps1444;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ1];external_name=Thaps1444;logic_name=jgi_thaps3 chr1 ensembl transcript 1527155 1528375 . - . ID=Thaps1444;Parent=Thaps1444;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1527155 1528375 . - 0 ID=Thaps1444;Parent=Thaps1444;rank=1 chr1 . exon 1527155 1528375 . - . ID=Thaps1444.1;Parent=Thaps1444;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1531553 1533148 . + . ID=Thaps1446;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ4];external_name=Thaps1446;logic_name=jgi_thaps3 chr1 ensembl transcript 1531553 1533148 . + . ID=Thaps1446;Parent=Thaps1446;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1531553 1533148 . + 0 ID=Thaps1446;Parent=Thaps1446;rank=1 chr1 . exon 1531553 1533148 . + . ID=Thaps1446.1;Parent=Thaps1446;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1533461 1534846 . - . ID=Thaps20833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ5];external_name=Thaps20833;logic_name=jgi_thaps3 chr1 ensembl transcript 1533461 1534846 . - . ID=Thaps20833;Parent=Thaps20833;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1533461 1534846 . - 0 ID=Thaps20833;Parent=Thaps20833;rank=1 chr1 . exon 1533461 1534846 . - . ID=Thaps20833.1;Parent=Thaps20833;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1530486 1531100 . - . ID=Thaps30921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ3];external_name=Thaps30921;logic_name=jgi_thaps3 chr1 ensembl transcript 1530486 1531100 . - . ID=Thaps30921;Parent=Thaps30921;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1530486 1531100 . - 0 ID=Thaps30921;Parent=Thaps30921;rank=1 chr1 . exon 1530486 1531100 . - . ID=Thaps30921.1;Parent=Thaps30921;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1528954 1530432 . + . ID=Thaps31035;biotype=protein_coding;description=Trypsin-like serine protease [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ2];external_name=Thaps31035;logic_name=jgi_thaps3 chr1 ensembl transcript 1528954 1530432 . + . ID=Thaps31035;Parent=Thaps31035;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1528954 1530432 . + 0 ID=Thaps31035;Parent=Thaps31035;rank=1 chr1 . exon 1528954 1530432 . + . ID=Thaps31035.1;Parent=Thaps31035;constitutive=1;rank=1 chr1 . repeat_region 1542403 1542435 . ? . description=trf chr1 ensembl protein_coding_gene 1537890 1540417 . + . ID=Thaps12821;biotype=protein_coding;description=Putative uncharacterized protein Sig1 [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ6];external_name=SIG1;logic_name=jgi_thaps3 chr1 ensembl transcript 1537890 1540417 . + . ID=Thaps12821;Parent=Thaps12821;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1537890 1538052 . + 0 ID=Thaps12821;Parent=Thaps12821;rank=1 chr1 . exon 1537890 1538052 . + . ID=Thaps12821.1;Parent=Thaps12821;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1538148 1539964 . + 0 ID=Thaps12821;Parent=Thaps12821;rank=2 chr1 . exon 1538148 1539964 . + . ID=Thaps12821.2;Parent=Thaps12821;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1540052 1540417 . + 0 ID=Thaps12821;Parent=Thaps12821;rank=3 chr1 . exon 1540052 1540417 . + . ID=Thaps12821.3;Parent=Thaps12821;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1540864 1541298 . - . ID=Thaps1449;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ7];external_name=Thaps1449;logic_name=jgi_thaps3 chr1 ensembl transcript 1540864 1541298 . - . ID=Thaps1449;Parent=Thaps1449;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1540864 1541298 . - 0 ID=Thaps1449;Parent=Thaps1449;rank=1 chr1 . exon 1540864 1541298 . - . ID=Thaps1449.1;Parent=Thaps1449;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1541783 1542610 . + . ID=Thaps1450;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ8];external_name=Thaps1450;logic_name=jgi_thaps3 chr1 ensembl transcript 1541783 1542610 . + . ID=Thaps1450;Parent=Thaps1450;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1541783 1542610 . + 0 ID=Thaps1450;Parent=Thaps1450;rank=1 chr1 . exon 1541783 1542610 . + . ID=Thaps1450.1;Parent=Thaps1450;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1542958 1544518 . - . ID=Thaps1451;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BQZ9];external_name=Thaps1451;logic_name=jgi_thaps3 chr1 ensembl transcript 1542958 1544518 . - . ID=Thaps1451;Parent=Thaps1451;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1542958 1543134 . - 0 ID=Thaps1451;Parent=Thaps1451;rank=3 chr1 . exon 1542958 1543134 . - . ID=Thaps1451.3;Parent=Thaps1451;constitutive=1;rank=3 chr1 . CDS 1543215 1544076 . - 0 ID=Thaps1451;Parent=Thaps1451;rank=2 chr1 . exon 1543215 1544076 . - . ID=Thaps1451.2;Parent=Thaps1451;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1544214 1544518 . - 0 ID=Thaps1451;Parent=Thaps1451;rank=1 chr1 . exon 1544214 1544518 . - . ID=Thaps1451.1;Parent=Thaps1451;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1545355 1546629 . + . ID=Thaps20834;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR00];external_name=Thaps20834;logic_name=jgi_thaps3 chr1 ensembl transcript 1545355 1546629 . + . ID=Thaps20834;Parent=Thaps20834;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1545355 1546629 . + 0 ID=Thaps20834;Parent=Thaps20834;rank=1 chr1 . exon 1545355 1546629 . + . ID=Thaps20834.1;Parent=Thaps20834;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1548653 1550518 . + . ID=Thaps20835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR01];external_name=Thaps20835;logic_name=jgi_thaps3 chr1 ensembl transcript 1548653 1550518 . + . ID=Thaps20835;Parent=Thaps20835;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1548653 1550518 . + 0 ID=Thaps20835;Parent=Thaps20835;rank=1 chr1 . exon 1548653 1550518 . + . ID=Thaps20835.1;Parent=Thaps20835;constitutive=1;rank=1 chr1 . repeat_region 1560340 1560347 . ? . description=dust chr1 ensembl protein_coding_gene 1562482 1562898 . + . ID=Thaps1455;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR02];external_name=Thaps1455;logic_name=jgi_thaps3 chr1 ensembl transcript 1562482 1562898 . + . ID=Thaps1455;Parent=Thaps1455;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1562482 1562898 . + 0 ID=Thaps1455;Parent=Thaps1455;rank=1 chr1 . exon 1562482 1562898 . + . ID=Thaps1455.1;Parent=Thaps1455;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1563405 1565782 . + . ID=Thaps1456;biotype=protein_coding;description=Putative uncharacterized protein IDH1 [Source:UniProtKB/TrEMBL%3BAcc:B8BR03];external_name=IDH1;logic_name=jgi_thaps3 chr1 ensembl transcript 1563405 1565782 . + . ID=Thaps1456;Parent=Thaps1456;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1563405 1563423 . + 0 ID=Thaps1456;Parent=Thaps1456;rank=1 chr1 . exon 1563405 1563423 . + . ID=Thaps1456.1;Parent=Thaps1456;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1563479 1563882 . + 0 ID=Thaps1456;Parent=Thaps1456;rank=2 chr1 . exon 1563479 1563882 . + . ID=Thaps1456.2;Parent=Thaps1456;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1563964 1564344 . + 0 ID=Thaps1456;Parent=Thaps1456;rank=3 chr1 . exon 1563964 1564344 . + . ID=Thaps1456.3;Parent=Thaps1456;constitutive=1;rank=3 chr1 . CDS 1564431 1564612 . + 0 ID=Thaps1456;Parent=Thaps1456;rank=4 chr1 . exon 1564431 1564612 . + . ID=Thaps1456.4;Parent=Thaps1456;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1564708 1564834 . + 0 ID=Thaps1456;Parent=Thaps1456;rank=5 chr1 . exon 1564708 1564834 . + . ID=Thaps1456.5;Parent=Thaps1456;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 1564907 1565782 . + 0 ID=Thaps1456;Parent=Thaps1456;rank=6 chr1 . exon 1564907 1565782 . + . ID=Thaps1456.6;Parent=Thaps1456;constitutive=1;rank=6 chr1 ensembl protein_coding_gene 1566827 1578922 . + . ID=Thaps1457;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR04];external_name=Thaps1457;logic_name=jgi_thaps3 chr1 ensembl transcript 1566827 1578922 . + . ID=Thaps1457;Parent=Thaps1457;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1566827 1578922 . + 0 ID=Thaps1457;Parent=Thaps1457;rank=1 chr1 . exon 1566827 1578922 . + . ID=Thaps1457.1;Parent=Thaps1457;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1585504 1586364 . - . ID=Thaps1460;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR07];external_name=Thaps1460;logic_name=jgi_thaps3 chr1 ensembl transcript 1585504 1586364 . - . ID=Thaps1460;Parent=Thaps1460;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1585504 1586364 . - 0 ID=Thaps1460;Parent=Thaps1460;rank=1 chr1 . exon 1585504 1586364 . - . ID=Thaps1460.1;Parent=Thaps1460;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1580474 1581328 . + . ID=Thaps20837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR05];external_name=Thaps20837;logic_name=jgi_thaps3 chr1 ensembl transcript 1580474 1581328 . + . ID=Thaps20837;Parent=Thaps20837;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1580474 1581328 . + 0 ID=Thaps20837;Parent=Thaps20837;rank=1 chr1 . exon 1580474 1581328 . + . ID=Thaps20837.1;Parent=Thaps20837;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1582050 1584773 . + . ID=Thaps20838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR06];external_name=Thaps20838;logic_name=jgi_thaps3 chr1 ensembl transcript 1582050 1584773 . + . ID=Thaps20838;Parent=Thaps20838;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1582050 1584773 . + 0 ID=Thaps20838;Parent=Thaps20838;rank=1 chr1 . exon 1582050 1584773 . + . ID=Thaps20838.1;Parent=Thaps20838;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1588921 1590394 . + . ID=Thaps1463;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR09];external_name=Thaps1463;logic_name=jgi_thaps3 chr1 ensembl transcript 1588921 1590394 . + . ID=Thaps1463;Parent=Thaps1463;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1588921 1589599 . + 0 ID=Thaps1463;Parent=Thaps1463;rank=1 chr1 . exon 1588921 1589599 . + . ID=Thaps1463.1;Parent=Thaps1463;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1589640 1589686 . + 0 ID=Thaps1463;Parent=Thaps1463;rank=2 chr1 . exon 1589640 1589686 . + . ID=Thaps1463.2;Parent=Thaps1463;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1589897 1590394 . + 0 ID=Thaps1463;Parent=Thaps1463;rank=3 chr1 . exon 1589897 1590394 . + . ID=Thaps1463.3;Parent=Thaps1463;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1591802 1592284 . - . ID=Thaps1464;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR10];external_name=Thaps1464;logic_name=jgi_thaps3 chr1 ensembl transcript 1591802 1592284 . - . ID=Thaps1464;Parent=Thaps1464;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1591802 1592284 . - 0 ID=Thaps1464;Parent=Thaps1464;rank=1 chr1 . exon 1591802 1592284 . - . ID=Thaps1464.1;Parent=Thaps1464;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1592570 1594564 . + . ID=Thaps1465;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR11];external_name=Thaps1465;logic_name=jgi_thaps3 chr1 ensembl transcript 1592570 1594564 . + . ID=Thaps1465;Parent=Thaps1465;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1592570 1594564 . + 0 ID=Thaps1465;Parent=Thaps1465;rank=1 chr1 . exon 1592570 1594564 . + . ID=Thaps1465.1;Parent=Thaps1465;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1586842 1588574 . + . ID=Thaps260958;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR08];external_name=Thaps260958;logic_name=jgi_thaps3 chr1 ensembl transcript 1586842 1588574 . + . ID=Thaps260958;Parent=Thaps260958;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1586842 1587416 . + 0 ID=Thaps260958;Parent=Thaps260958;rank=1 chr1 . exon 1586842 1587416 . + . ID=Thaps260958.1;Parent=Thaps260958;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1587456 1588574 . + 0 ID=Thaps260958;Parent=Thaps260958;rank=2 chr1 . exon 1587456 1588574 . + . ID=Thaps260958.2;Parent=Thaps260958;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1595081 1596437 . - . ID=Thaps260959;biotype=protein_coding;description=Atp-dependent helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BR12];external_name=Thaps260959;logic_name=jgi_thaps3 chr1 ensembl transcript 1595081 1596437 . - . ID=Thaps260959;Parent=Thaps260959;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1595081 1596437 . - 0 ID=Thaps260959;Parent=Thaps260959;rank=1 chr1 . exon 1595081 1596437 . - . ID=Thaps260959.1;Parent=Thaps260959;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 1597694 1597719 . ? . description=dust chr1 . repeat_region 1598062 1598102 . ? . description=trf chr1 . repeat_region 1602653 1602661 . ? . description=dust chr1 ensembl protein_coding_gene 1597723 1598928 . + . ID=Thaps1467;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR13];external_name=Thaps1467;logic_name=jgi_thaps3 chr1 ensembl transcript 1597723 1598928 . + . ID=Thaps1467;Parent=Thaps1467;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1597723 1598928 . + 0 ID=Thaps1467;Parent=Thaps1467;rank=1 chr1 . exon 1597723 1598928 . + . ID=Thaps1467.1;Parent=Thaps1467;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1604969 1607038 . - . ID=Thaps1470;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR16];external_name=Thaps1470;logic_name=jgi_thaps3 chr1 ensembl transcript 1604969 1607038 . - . ID=Thaps1470;Parent=Thaps1470;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1604969 1606048 . - 0 ID=Thaps1470;Parent=Thaps1470;rank=2 chr1 . exon 1604969 1606048 . - . ID=Thaps1470.2;Parent=Thaps1470;constitutive=1;rank=2 chr1 . CDS 1606124 1607038 . - 0 ID=Thaps1470;Parent=Thaps1470;rank=1 chr1 . exon 1606124 1607038 . - . ID=Thaps1470.1;Parent=Thaps1470;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1603482 1604144 . + . ID=Thaps26071;biotype=protein_coding;description=Proteasome subunit beta type [Source:UniProtKB/TrEMBL%3BAcc:B8BR15];external_name=PSB_1;logic_name=jgi_thaps3 chr1 ensembl transcript 1603482 1604144 . + . ID=Thaps26071;Parent=Thaps26071;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1603482 1604144 . + 0 ID=Thaps26071;Parent=Thaps26071;rank=1 chr1 . exon 1603482 1604144 . + . ID=Thaps26071.1;Parent=Thaps26071;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1599936 1600688 . + . ID=Thaps31404;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR14];external_name=Thaps31404;logic_name=jgi_thaps3 chr1 ensembl transcript 1599936 1600688 . + . ID=Thaps31404;Parent=Thaps31404;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1599936 1600113 . + 0 ID=Thaps31404;Parent=Thaps31404;rank=1 chr1 . exon 1599936 1600113 . + . ID=Thaps31404.1;Parent=Thaps31404;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1600321 1600688 . + 0 ID=Thaps31404;Parent=Thaps31404;rank=2 chr1 . exon 1600321 1600688 . + . ID=Thaps31404.2;Parent=Thaps31404;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1607500 1611344 . + . ID=Thaps1471;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR17];external_name=Thaps1471;logic_name=jgi_thaps3 chr1 ensembl transcript 1607500 1611344 . + . ID=Thaps1471;Parent=Thaps1471;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1607500 1608489 . + 0 ID=Thaps1471;Parent=Thaps1471;rank=1 chr1 . exon 1607500 1608489 . + . ID=Thaps1471.1;Parent=Thaps1471;constitutive=1;rank=1 chr1 . CDS 1608567 1611344 . + 0 ID=Thaps1471;Parent=Thaps1471;rank=2 chr1 . exon 1608567 1611344 . + . ID=Thaps1471.2;Parent=Thaps1471;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1611408 1612441 . - . ID=Thaps20843;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR18];external_name=Thaps20843;logic_name=jgi_thaps3 chr1 ensembl transcript 1611408 1612441 . - . ID=Thaps20843;Parent=Thaps20843;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1611408 1611557 . - 0 ID=Thaps20843;Parent=Thaps20843;rank=2 chr1 . exon 1611408 1611557 . - . ID=Thaps20843.2;Parent=Thaps20843;constitutive=1;rank=2 chr1 . CDS 1611662 1612441 . - 0 ID=Thaps20843;Parent=Thaps20843;rank=1 chr1 . exon 1611662 1612441 . - . ID=Thaps20843.1;Parent=Thaps20843;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1614561 1614895 . - . ID=Thaps260962;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR20];external_name=Thaps260962;logic_name=jgi_thaps3 chr1 ensembl transcript 1614561 1614895 . - . ID=Thaps260962;Parent=Thaps260962;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1614561 1614895 . - 0 ID=Thaps260962;Parent=Thaps260962;rank=1 chr1 . exon 1614561 1614895 . - . ID=Thaps260962.1;Parent=Thaps260962;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1613563 1613976 . + . ID=Thaps30979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR19];external_name=Thaps30979;logic_name=jgi_thaps3 chr1 ensembl transcript 1613563 1613976 . + . ID=Thaps30979;Parent=Thaps30979;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1613563 1613976 . + 0 ID=Thaps30979;Parent=Thaps30979;rank=1 chr1 . exon 1613563 1613976 . + . ID=Thaps30979.1;Parent=Thaps30979;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1615977 1616303 . - . ID=Thaps39141;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR21];external_name=Thaps39141;logic_name=jgi_thaps3 chr1 ensembl transcript 1615977 1616303 . - . ID=Thaps39141;Parent=Thaps39141;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1615977 1616303 . - 0 ID=Thaps39141;Parent=Thaps39141;rank=1 chr1 . exon 1615977 1616303 . - . ID=Thaps39141.1;Parent=Thaps39141;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1619146 1620426 . - . ID=Thaps1477;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR23];external_name=Thaps1477;logic_name=jgi_thaps3 chr1 ensembl transcript 1619146 1620426 . - . ID=Thaps1477;Parent=Thaps1477;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1619146 1620426 . - 0 ID=Thaps1477;Parent=Thaps1477;rank=1 chr1 . exon 1619146 1620426 . - . ID=Thaps1477.1;Parent=Thaps1477;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1623011 1625497 . - . ID=Thaps1479;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR25];external_name=Thaps1479;logic_name=jgi_thaps3 chr1 ensembl transcript 1623011 1625497 . - . ID=Thaps1479;Parent=Thaps1479;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1623011 1625497 . - 0 ID=Thaps1479;Parent=Thaps1479;rank=1 chr1 . exon 1623011 1625497 . - . ID=Thaps1479.1;Parent=Thaps1479;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1616617 1617990 . + . ID=Thaps20845;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR22];external_name=Thaps20845;logic_name=jgi_thaps3 chr1 ensembl transcript 1616617 1617990 . + . ID=Thaps20845;Parent=Thaps20845;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1616617 1617990 . + 0 ID=Thaps20845;Parent=Thaps20845;rank=1 chr1 . exon 1616617 1617990 . + . ID=Thaps20845.1;Parent=Thaps20845;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1625749 1627119 . + . ID=Thaps20846;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR26];external_name=Thaps20846;logic_name=jgi_thaps3 chr1 ensembl transcript 1625749 1627119 . + . ID=Thaps20846;Parent=Thaps20846;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1625749 1627119 . + 0 ID=Thaps20846;Parent=Thaps20846;rank=1 chr1 . exon 1625749 1627119 . + . ID=Thaps20846.1;Parent=Thaps20846;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1620889 1622830 . + . ID=Thaps260965;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR24];external_name=Thaps260965;logic_name=jgi_thaps3 chr1 ensembl transcript 1620889 1622830 . + . ID=Thaps260965;Parent=Thaps260965;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1620889 1621180 . + 0 ID=Thaps260965;Parent=Thaps260965;rank=1 chr1 . exon 1620889 1621180 . + . ID=Thaps260965.1;Parent=Thaps260965;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1621217 1621230 . + 0 ID=Thaps260965;Parent=Thaps260965;rank=2 chr1 . exon 1621217 1621230 . + . ID=Thaps260965.2;Parent=Thaps260965;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1621369 1622088 . + 0 ID=Thaps260965;Parent=Thaps260965;rank=3 chr1 . exon 1621369 1622088 . + . ID=Thaps260965.3;Parent=Thaps260965;constitutive=1;rank=3 chr1 . CDS 1622168 1622830 . + 0 ID=Thaps260965;Parent=Thaps260965;rank=4 chr1 . exon 1622168 1622830 . + . ID=Thaps260965.4;Parent=Thaps260965;constitutive=1;rank=4 chr1 . repeat_region 1628305 1628358 . ? . description=dust chr1 . repeat_region 1630489 1630530 . ? . description=trf chr1 . repeat_region 1630551 1630581 . ? . description=trf chr1 . repeat_region 1635349 1635356 . ? . description=dust chr1 ensembl protein_coding_gene 1627267 1628568 . - . ID=Thaps1481;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR27];external_name=Thaps1481;logic_name=jgi_thaps3 chr1 ensembl transcript 1627267 1628568 . - . ID=Thaps1481;Parent=Thaps1481;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1627267 1628568 . - 0 ID=Thaps1481;Parent=Thaps1481;rank=1 chr1 . exon 1627267 1628568 . - . ID=Thaps1481.1;Parent=Thaps1481;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1630364 1631080 . + . ID=Thaps20847;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR28];external_name=Thaps20847;logic_name=jgi_thaps3 chr1 ensembl transcript 1630364 1631080 . + . ID=Thaps20847;Parent=Thaps20847;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1630364 1630386 . + 0 ID=Thaps20847;Parent=Thaps20847;rank=1 chr1 . exon 1630364 1630386 . + . ID=Thaps20847.1;Parent=Thaps20847;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1630534 1631080 . + 0 ID=Thaps20847;Parent=Thaps20847;rank=2 chr1 . exon 1630534 1631080 . + . ID=Thaps20847.2;Parent=Thaps20847;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1632263 1635795 . + . ID=Thaps20848;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR29];external_name=Thaps20848;logic_name=jgi_thaps3 chr1 ensembl transcript 1632263 1635795 . + . ID=Thaps20848;Parent=Thaps20848;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1632263 1634999 . + 0 ID=Thaps20848;Parent=Thaps20848;rank=1 chr1 . exon 1632263 1634999 . + . ID=Thaps20848.1;Parent=Thaps20848;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1635377 1635795 . + 0 ID=Thaps20848;Parent=Thaps20848;rank=2 chr1 . exon 1635377 1635795 . + . ID=Thaps20848.2;Parent=Thaps20848;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1635999 1636907 . + . ID=Thaps39143;biotype=protein_coding;description=Adenine nucleotide translocator%3B ATP/ADP translocase [Source:UniProtKB/TrEMBL%3BAcc:B8BR30];external_name=ANT1;logic_name=jgi_thaps3 chr1 ensembl transcript 1635999 1636907 . + . ID=Thaps39143;Parent=Thaps39143;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1635999 1636907 . + 0 ID=Thaps39143;Parent=Thaps39143;rank=1 chr1 . exon 1635999 1636907 . + . ID=Thaps39143.1;Parent=Thaps39143;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1645373 1646098 . - . ID=Thaps1487;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR33];external_name=Thaps1487;logic_name=jgi_thaps3 chr1 ensembl transcript 1645373 1646098 . - . ID=Thaps1487;Parent=Thaps1487;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1645373 1646098 . - 0 ID=Thaps1487;Parent=Thaps1487;rank=1 chr1 . exon 1645373 1646098 . - . ID=Thaps1487.1;Parent=Thaps1487;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1637728 1643145 . + . ID=Thaps26702;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR31];external_name=Thaps26702;logic_name=jgi_thaps3 chr1 ensembl transcript 1637728 1643145 . + . ID=Thaps26702;Parent=Thaps26702;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1637728 1637730 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=1 chr1 . exon 1637728 1637730 . + . ID=Thaps26702.1;Parent=Thaps26702;constitutive=1;rank=1 chr1 . CDS 1637894 1638125 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=2 chr1 . exon 1637894 1638125 . + . ID=Thaps26702.2;Parent=Thaps26702;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1638288 1638506 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=3 chr1 . exon 1638288 1638506 . + . ID=Thaps26702.3;Parent=Thaps26702;constitutive=1;rank=3 chr1 . CDS 1638792 1639173 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=4 chr1 . exon 1638792 1639173 . + . ID=Thaps26702.4;Parent=Thaps26702;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 1639255 1639756 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=5 chr1 . exon 1639255 1639756 . + . ID=Thaps26702.5;Parent=Thaps26702;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 1639922 1640064 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=6 chr1 . exon 1639922 1640064 . + . ID=Thaps26702.6;Parent=Thaps26702;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 1640209 1640383 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=7 chr1 . exon 1640209 1640383 . + . ID=Thaps26702.7;Parent=Thaps26702;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 1640563 1640922 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=8 chr1 . exon 1640563 1640922 . + . ID=Thaps26702.8;Parent=Thaps26702;constitutive=1;rank=8 chr1 . CDS 1641559 1642596 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=9 chr1 . exon 1641559 1642596 . + . ID=Thaps26702.9;Parent=Thaps26702;constitutive=1;rank=9 chr1 . CDS 1642682 1642840 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=10 chr1 . exon 1642682 1642840 . + . ID=Thaps26702.10;Parent=Thaps26702;constitutive=1;rank=10 chr1 . CDS 1642924 1643145 . + 0 ID=Thaps26702;Parent=Thaps26702;rank=11 chr1 . exon 1642924 1643145 . + . ID=Thaps26702.11;Parent=Thaps26702;constitutive=1;rank=11 chr1 ensembl protein_coding_gene 1643352 1644183 . - . ID=Thaps31472;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR32];external_name=Thaps31472;logic_name=jgi_thaps3 chr1 ensembl transcript 1643352 1644183 . - . ID=Thaps31472;Parent=Thaps31472;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1643352 1643855 . - 0 ID=Thaps31472;Parent=Thaps31472;rank=2 chr1 . exon 1643352 1643855 . - . ID=Thaps31472.2;Parent=Thaps31472;constitutive=1;rank=2 chr1 . CDS 1643953 1644183 . - 0 ID=Thaps31472;Parent=Thaps31472;rank=1 chr1 . exon 1643953 1644183 . - . ID=Thaps31472.1;Parent=Thaps31472;constitutive=1;rank=1 chr1 . repeat_region 1646461 1646483 . ? . description=trf chr1 . repeat_region 1646461 1646483 . ? . description=dust chr1 ensembl protein_coding_gene 1654413 1656352 . + . ID=Thaps260974;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR36];external_name=Thaps260974;logic_name=jgi_thaps3 chr1 ensembl transcript 1654413 1656352 . + . ID=Thaps260974;Parent=Thaps260974;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1654413 1654734 . + 0 ID=Thaps260974;Parent=Thaps260974;rank=1 chr1 . exon 1654413 1654734 . + . ID=Thaps260974.1;Parent=Thaps260974;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1654780 1655019 . + 0 ID=Thaps260974;Parent=Thaps260974;rank=2 chr1 . exon 1654780 1655019 . + . ID=Thaps260974.2;Parent=Thaps260974;constitutive=1;rank=2 chr1 . CDS 1655068 1655163 . + 0 ID=Thaps260974;Parent=Thaps260974;rank=3 chr1 . exon 1655068 1655163 . + . ID=Thaps260974.3;Parent=Thaps260974;constitutive=1;rank=3 chr1 . CDS 1655254 1655429 . + 0 ID=Thaps260974;Parent=Thaps260974;rank=4 chr1 . exon 1655254 1655429 . + . ID=Thaps260974.4;Parent=Thaps260974;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1655556 1655809 . + 0 ID=Thaps260974;Parent=Thaps260974;rank=5 chr1 . exon 1655556 1655809 . + . ID=Thaps260974.5;Parent=Thaps260974;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 1655903 1656352 . + 0 ID=Thaps260974;Parent=Thaps260974;rank=6 chr1 . exon 1655903 1656352 . + . ID=Thaps260974.6;Parent=Thaps260974;constitutive=1;rank=6 chr1 ensembl protein_coding_gene 1651544 1653320 . + . ID=Thaps31535;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR35];external_name=Thaps31535;logic_name=jgi_thaps3 chr1 ensembl transcript 1651544 1653320 . + . ID=Thaps31535;Parent=Thaps31535;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1651544 1651771 . + 0 ID=Thaps31535;Parent=Thaps31535;rank=1 chr1 . exon 1651544 1651771 . + . ID=Thaps31535.1;Parent=Thaps31535;constitutive=1;rank=1 chr1 . CDS 1651843 1652004 . + 0 ID=Thaps31535;Parent=Thaps31535;rank=2 chr1 . exon 1651843 1652004 . + . ID=Thaps31535.2;Parent=Thaps31535;constitutive=1;rank=2 chr1 . CDS 1652090 1652693 . + 0 ID=Thaps31535;Parent=Thaps31535;rank=3 chr1 . exon 1652090 1652693 . + . ID=Thaps31535.3;Parent=Thaps31535;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1652783 1653034 . + 0 ID=Thaps31535;Parent=Thaps31535;rank=4 chr1 . exon 1652783 1653034 . + . ID=Thaps31535.4;Parent=Thaps31535;constitutive=1;rank=4 chr1 . CDS 1653115 1653320 . + 0 ID=Thaps31535;Parent=Thaps31535;rank=5 chr1 . exon 1653115 1653320 . + . ID=Thaps31535.5;Parent=Thaps31535;constitutive=1;ensembl_end_phase=2;rank=5 chr1 ensembl protein_coding_gene 1649050 1651371 . - . ID=Thaps39149;biotype=protein_coding;description=HSP90 domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR34];external_name=Thaps39149;logic_name=jgi_thaps3 chr1 ensembl transcript 1649050 1651371 . - . ID=Thaps39149;Parent=Thaps39149;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1649050 1649938 . - 0 ID=Thaps39149;Parent=Thaps39149;rank=2 chr1 . exon 1649050 1649938 . - . ID=Thaps39149.2;Parent=Thaps39149;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1650008 1651371 . - 0 ID=Thaps39149;Parent=Thaps39149;rank=1 chr1 . exon 1650008 1651371 . - . ID=Thaps39149.1;Parent=Thaps39149;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 1664854 1665082 . - . description=Copia6LTR_TP chr1 ensembl protein_coding_gene 1659928 1661235 . + . ID=Thaps1492;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR38];external_name=Thaps1492;logic_name=jgi_thaps3 chr1 ensembl transcript 1659928 1661235 . + . ID=Thaps1492;Parent=Thaps1492;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1659928 1660077 . + 0 ID=Thaps1492;Parent=Thaps1492;rank=1 chr1 . exon 1659928 1660077 . + . ID=Thaps1492.1;Parent=Thaps1492;constitutive=1;rank=1 chr1 . CDS 1660278 1660563 . + 0 ID=Thaps1492;Parent=Thaps1492;rank=2 chr1 . exon 1660278 1660563 . + . ID=Thaps1492.2;Parent=Thaps1492;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1660970 1661235 . + 0 ID=Thaps1492;Parent=Thaps1492;rank=3 chr1 . exon 1660970 1661235 . + . ID=Thaps1492.3;Parent=Thaps1492;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1661879 1664437 . - . ID=Thaps20854;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR39];external_name=Thaps20854;logic_name=jgi_thaps3 chr1 ensembl transcript 1661879 1664437 . - . ID=Thaps20854;Parent=Thaps20854;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1661879 1662258 . - 0 ID=Thaps20854;Parent=Thaps20854;rank=2 chr1 . exon 1661879 1662258 . - . ID=Thaps20854.2;Parent=Thaps20854;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1662358 1664437 . - 0 ID=Thaps20854;Parent=Thaps20854;rank=1 chr1 . exon 1662358 1664437 . - . ID=Thaps20854.1;Parent=Thaps20854;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1656990 1658174 . + . ID=Thaps260975;biotype=protein_coding;description=Na+/H+ exchange protein also known as sodium:hydrogen antiporter [Source:UniProtKB/TrEMBL%3BAcc:B8BR37];external_name=NHE3;logic_name=jgi_thaps3 chr1 ensembl transcript 1656990 1658174 . + . ID=Thaps260975;Parent=Thaps260975;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1656990 1657343 . + 0 ID=Thaps260975;Parent=Thaps260975;rank=1 chr1 . exon 1656990 1657343 . + . ID=Thaps260975.1;Parent=Thaps260975;constitutive=1;rank=1 chr1 . CDS 1657419 1657984 . + 0 ID=Thaps260975;Parent=Thaps260975;rank=2 chr1 . exon 1657419 1657984 . + . ID=Thaps260975.2;Parent=Thaps260975;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1658006 1658174 . + 0 ID=Thaps260975;Parent=Thaps260975;rank=3 chr1 . exon 1658006 1658174 . + . ID=Thaps260975.3;Parent=Thaps260975;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 1665691 1667037 . + . ID=Thaps31622;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR40];external_name=Thaps31622;logic_name=jgi_thaps3 chr1 ensembl transcript 1665691 1667037 . + . ID=Thaps31622;Parent=Thaps31622;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1665691 1666081 . + 0 ID=Thaps31622;Parent=Thaps31622;rank=1 chr1 . exon 1665691 1666081 . + . ID=Thaps31622.1;Parent=Thaps31622;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1666130 1666417 . + 0 ID=Thaps31622;Parent=Thaps31622;rank=2 chr1 . CDS 1666478 1666749 . + 0 ID=Thaps31622;Parent=Thaps31622;rank=3 chr1 . CDS 1666795 1667037 . + 0 ID=Thaps31622;Parent=Thaps31622;rank=4 chr1 . repeat_region 1674895 1674935 . ? . description=trf chr1 . repeat_region 1675193 1675201 . ? . description=dust chr1 ensembl protein_coding_gene 1667601 1668698 . - . ID=Thaps1495;biotype=protein_coding;description=Flagellar protofilament ribbon like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR41];external_name=Thaps1495;logic_name=jgi_thaps3 chr1 ensembl transcript 1667601 1668698 . - . ID=Thaps1495;Parent=Thaps1495;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1667601 1668698 . - 0 ID=Thaps1495;Parent=Thaps1495;rank=1 chr1 . exon 1667601 1668698 . - . ID=Thaps1495.1;Parent=Thaps1495;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1669001 1669936 . + . ID=Thaps26706;biotype=protein_coding;description=Proteasome subunit alpha type [Source:UniProtKB/TrEMBL%3BAcc:B8BR42];external_name=PSA7;logic_name=jgi_thaps3 chr1 ensembl transcript 1669001 1669936 . + . ID=Thaps26706;Parent=Thaps26706;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1669001 1669155 . + 0 ID=Thaps26706;Parent=Thaps26706;rank=1 chr1 . exon 1669001 1669155 . + . ID=Thaps26706.1;Parent=Thaps26706;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1669345 1669936 . + 0 ID=Thaps26706;Parent=Thaps26706;rank=2 chr1 . exon 1669345 1669936 . + . ID=Thaps26706.2;Parent=Thaps26706;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1670132 1674948 . - . ID=Thaps268040;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR43];external_name=Thaps268040;logic_name=jgi_thaps3 chr1 ensembl transcript 1670132 1674948 . - . ID=Thaps268040;Parent=Thaps268040;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1670132 1670566 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=11 chr1 . exon 1670132 1670566 . - . ID=Thaps268040.11;Parent=Thaps268040;constitutive=1;rank=11 chr1 . CDS 1670656 1670720 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=10 chr1 . exon 1670656 1670720 . - . ID=Thaps268040.10;Parent=Thaps268040;constitutive=1;ensembl_end_phase=2;rank=10 chr1 . CDS 1670790 1670950 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=9 chr1 . exon 1670790 1670950 . - . ID=Thaps268040.9;Parent=Thaps268040;constitutive=1;ensembl_end_phase=2;rank=9 chr1 . CDS 1671024 1671291 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=8 chr1 . exon 1671024 1671291 . - . ID=Thaps268040.8;Parent=Thaps268040;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . CDS 1671372 1671414 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=7 chr1 . exon 1671372 1671414 . - . ID=Thaps268040.7;Parent=Thaps268040;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 1671510 1672149 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=6 chr1 . exon 1671510 1672149 . - . ID=Thaps268040.6;Parent=Thaps268040;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 1672351 1672474 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=5 chr1 . exon 1672351 1672474 . - . ID=Thaps268040.5;Parent=Thaps268040;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 1672551 1672794 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=4 chr1 . exon 1672551 1672794 . - . ID=Thaps268040.4;Parent=Thaps268040;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 1672881 1673188 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=3 chr1 . exon 1672881 1673188 . - . ID=Thaps268040.3;Parent=Thaps268040;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1673343 1674410 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=2 chr1 . exon 1673343 1674410 . - . ID=Thaps268040.2;Parent=Thaps268040;constitutive=1;rank=2 chr1 . CDS 1674825 1674948 . - 0 ID=Thaps268040;Parent=Thaps268040;rank=1 chr1 . exon 1674825 1674948 . - . ID=Thaps268040.1;Parent=Thaps268040;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . exon 1666130 1666417 . + . ID=Thaps31622.2;Parent=Thaps31622;constitutive=1;rank=2 chr1 . exon 1666478 1666749 . + . ID=Thaps31622.3;Parent=Thaps31622;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 1666795 1667037 . + . ID=Thaps31622.4;Parent=Thaps31622;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 1680929 1683444 . - . ID=Thaps1499;biotype=protein_coding;description=Cysteinyl-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BR45];external_name=CTS1;logic_name=jgi_thaps3 chr1 ensembl transcript 1680929 1683444 . - . ID=Thaps1499;Parent=Thaps1499;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1680929 1682160 . - 0 ID=Thaps1499;Parent=Thaps1499;rank=2 chr1 . exon 1680929 1682160 . - . ID=Thaps1499.2;Parent=Thaps1499;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1682253 1683444 . - 0 ID=Thaps1499;Parent=Thaps1499;rank=1 chr1 . exon 1682253 1683444 . - . ID=Thaps1499.1;Parent=Thaps1499;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1684011 1686884 . + . ID=Thaps1500;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR46];external_name=Thaps1500;logic_name=jgi_thaps3 chr1 ensembl transcript 1684011 1686884 . + . ID=Thaps1500;Parent=Thaps1500;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1684011 1684311 . + 0 ID=Thaps1500;Parent=Thaps1500;rank=1 chr1 . exon 1684011 1684311 . + . ID=Thaps1500.1;Parent=Thaps1500;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1684412 1686800 . + 0 ID=Thaps1500;Parent=Thaps1500;rank=2 chr1 . exon 1684412 1686800 . + . ID=Thaps1500.2;Parent=Thaps1500;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1686881 1686884 . + 0 ID=Thaps1500;Parent=Thaps1500;rank=3 chr1 ensembl protein_coding_gene 1678822 1680387 . + . ID=Thaps260980;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR44];external_name=Thaps260980;logic_name=jgi_thaps3 chr1 ensembl transcript 1678822 1680387 . + . ID=Thaps260980;Parent=Thaps260980;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1678822 1680387 . + 0 ID=Thaps260980;Parent=Thaps260980;rank=1 chr1 . exon 1678822 1680387 . + . ID=Thaps260980.1;Parent=Thaps260980;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1687367 1689466 . - . ID=Thaps12960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR47];external_name=Thaps12960;logic_name=jgi_thaps3 chr1 ensembl transcript 1687367 1689466 . - . ID=Thaps12960;Parent=Thaps12960;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1687367 1687878 . - 0 ID=Thaps12960;Parent=Thaps12960;rank=3 chr1 . exon 1687367 1687878 . - . ID=Thaps12960.3;Parent=Thaps12960;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1687981 1688200 . - 0 ID=Thaps12960;Parent=Thaps12960;rank=2 chr1 . exon 1687981 1688200 . - . ID=Thaps12960.2;Parent=Thaps12960;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1688267 1689466 . - 0 ID=Thaps12960;Parent=Thaps12960;rank=1 chr1 . exon 1688267 1689466 . - . ID=Thaps12960.1;Parent=Thaps12960;constitutive=1;rank=1 chr1 . exon 1686881 1686884 . + . ID=Thaps1500.3;Parent=Thaps1500;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 1690302 1692638 . + . ID=Thaps1502;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR48];external_name=Thaps1502;logic_name=jgi_thaps3 chr1 ensembl transcript 1690302 1692638 . + . ID=Thaps1502;Parent=Thaps1502;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1690302 1692638 . + 0 ID=Thaps1502;Parent=Thaps1502;rank=1 chr1 . exon 1690302 1692638 . + . ID=Thaps1502.1;Parent=Thaps1502;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1693953 1694122 . - . ID=Thaps260982;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR49];external_name=Thaps260982;logic_name=jgi_thaps3 chr1 ensembl transcript 1693953 1694122 . - . ID=Thaps260982;Parent=Thaps260982;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1693953 1694122 . - 0 ID=Thaps260982;Parent=Thaps260982;rank=1 chr1 . exon 1693953 1694122 . - . ID=Thaps260982.1;Parent=Thaps260982;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 1696222 1696249 . ? . description=dust chr1 . repeat_region 1703761 1703780 . ? . description=trf chr1 ensembl protein_coding_gene 1704700 1706067 . + . ID=Thaps1505;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR53];external_name=Thaps1505;logic_name=jgi_thaps3 chr1 ensembl transcript 1704700 1706067 . + . ID=Thaps1505;Parent=Thaps1505;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1704700 1706067 . + 0 ID=Thaps1505;Parent=Thaps1505;rank=1 chr1 . exon 1704700 1706067 . + . ID=Thaps1505.1;Parent=Thaps1505;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1698565 1698978 . - . ID=Thaps268043;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR50];external_name=Thaps268043;logic_name=jgi_thaps3 chr1 ensembl transcript 1698565 1698978 . - . ID=Thaps268043;Parent=Thaps268043;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1698565 1698978 . - 0 ID=Thaps268043;Parent=Thaps268043;rank=1 chr1 . exon 1698565 1698978 . - . ID=Thaps268043.1;Parent=Thaps268043;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1699509 1700219 . - . ID=Thaps268044;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR51];external_name=Thaps268044;logic_name=jgi_thaps3 chr1 ensembl transcript 1699509 1700219 . - . ID=Thaps268044;Parent=Thaps268044;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1699509 1700219 . - 0 ID=Thaps268044;Parent=Thaps268044;rank=1 chr1 . exon 1699509 1700219 . - . ID=Thaps268044.1;Parent=Thaps268044;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1702190 1703838 . + . ID=Thaps31037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR52];external_name=Thaps31037;logic_name=jgi_thaps3 chr1 ensembl transcript 1702190 1703838 . + . ID=Thaps31037;Parent=Thaps31037;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1702190 1702414 . + 0 ID=Thaps31037;Parent=Thaps31037;rank=1 chr1 . exon 1702190 1702414 . + . ID=Thaps31037.1;Parent=Thaps31037;constitutive=1;rank=1 chr1 . CDS 1702528 1703181 . + 0 ID=Thaps31037;Parent=Thaps31037;rank=2 chr1 . exon 1702528 1703181 . + . ID=Thaps31037.2;Parent=Thaps31037;constitutive=1;rank=2 chr1 . CDS 1703275 1703838 . + 0 ID=Thaps31037;Parent=Thaps31037;rank=3 chr1 . exon 1703275 1703838 . + . ID=Thaps31037.3;Parent=Thaps31037;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1706171 1706933 . - . ID=Thaps1506;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR54];external_name=Thaps1506;logic_name=jgi_thaps3 chr1 ensembl transcript 1706171 1706933 . - . ID=Thaps1506;Parent=Thaps1506;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1706171 1706311 . - 0 ID=Thaps1506;Parent=Thaps1506;rank=2 chr1 . exon 1706171 1706311 . - . ID=Thaps1506.2;Parent=Thaps1506;constitutive=1;rank=2 chr1 . CDS 1706397 1706933 . - 0 ID=Thaps1506;Parent=Thaps1506;rank=1 chr1 . exon 1706397 1706933 . - . ID=Thaps1506.1;Parent=Thaps1506;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1707158 1708735 . + . ID=Thaps20859;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR55];external_name=Thaps20859;logic_name=jgi_thaps3 chr1 ensembl transcript 1707158 1708735 . + . ID=Thaps20859;Parent=Thaps20859;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1707158 1708735 . + 0 ID=Thaps20859;Parent=Thaps20859;rank=1 chr1 . exon 1707158 1708735 . + . ID=Thaps20859.1;Parent=Thaps20859;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1710900 1712633 . - . ID=Thaps268048;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR57];external_name=Thaps268048;logic_name=jgi_thaps3 chr1 ensembl transcript 1710900 1712633 . - . ID=Thaps268048;Parent=Thaps268048;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1710900 1711531 . - 0 ID=Thaps268048;Parent=Thaps268048;rank=2 chr1 . exon 1710900 1711531 . - . ID=Thaps268048.2;Parent=Thaps268048;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1711835 1712633 . - 0 ID=Thaps268048;Parent=Thaps268048;rank=1 chr1 . exon 1711835 1712633 . - . ID=Thaps268048.1;Parent=Thaps268048;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1712985 1716959 . + . ID=Thaps268049;biotype=protein_coding;description=ATP dependent RNA helicase [Source:UniProtKB/TrEMBL%3BAcc:B8BR58];external_name=ATH1;logic_name=jgi_thaps3 chr1 ensembl transcript 1712985 1716959 . + . ID=Thaps268049;Parent=Thaps268049;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1712985 1713290 . + 0 ID=Thaps268049;Parent=Thaps268049;rank=1 chr1 . exon 1712985 1713290 . + . ID=Thaps268049.1;Parent=Thaps268049;constitutive=1;rank=1 chr1 . CDS 1713450 1713516 . + 0 ID=Thaps268049;Parent=Thaps268049;rank=2 chr1 . exon 1713450 1713516 . + . ID=Thaps268049.2;Parent=Thaps268049;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1713616 1714295 . + 0 ID=Thaps268049;Parent=Thaps268049;rank=3 chr1 . exon 1713616 1714295 . + . ID=Thaps268049.3;Parent=Thaps268049;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1714341 1714382 . + 0 ID=Thaps268049;Parent=Thaps268049;rank=4 chr1 . exon 1714341 1714382 . + . ID=Thaps268049.4;Parent=Thaps268049;constitutive=1;rank=4 chr1 . CDS 1714479 1716959 . + 0 ID=Thaps268049;Parent=Thaps268049;rank=5 chr1 . exon 1714479 1716959 . + . ID=Thaps268049.5;Parent=Thaps268049;constitutive=1;rank=5 chr1 ensembl protein_coding_gene 1708926 1710251 . - . ID=Thaps39157;biotype=protein_coding;description=26S proteasome ATPase regulatory subunit 4 [Source:UniProtKB/TrEMBL%3BAcc:B8BR56];external_name=RPT2;logic_name=jgi_thaps3 chr1 ensembl transcript 1708926 1710251 . - . ID=Thaps39157;Parent=Thaps39157;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1708926 1710251 . - 0 ID=Thaps39157;Parent=Thaps39157;rank=1 chr1 . exon 1708926 1710251 . - . ID=Thaps39157.1;Parent=Thaps39157;constitutive=1;rank=1 chr1 . repeat_region 1722470 1722494 . ? . description=dust chr1 . biological_region 1724855 1724856 0.999 + . logic_name=eponine chr1 ensembl protein_coding_gene 1717241 1718036 . - . ID=Thaps1512;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR59];external_name=Thaps1512;logic_name=jgi_thaps3 chr1 ensembl transcript 1717241 1718036 . - . ID=Thaps1512;Parent=Thaps1512;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1717241 1718036 . - 0 ID=Thaps1512;Parent=Thaps1512;rank=1 chr1 . exon 1717241 1718036 . - . ID=Thaps1512.1;Parent=Thaps1512;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1725127 1725948 . + . ID=Thaps1515;biotype=protein_coding;description=NifU like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR62];external_name=NIFU_1;logic_name=jgi_thaps3 chr1 ensembl transcript 1725127 1725948 . + . ID=Thaps1515;Parent=Thaps1515;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1725127 1725492 . + 0 ID=Thaps1515;Parent=Thaps1515;rank=1 chr1 . exon 1725127 1725492 . + . ID=Thaps1515.1;Parent=Thaps1515;constitutive=1;rank=1 chr1 . CDS 1725601 1725948 . + 0 ID=Thaps1515;Parent=Thaps1515;rank=2 chr1 . exon 1725601 1725948 . + . ID=Thaps1515.2;Parent=Thaps1515;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1718699 1719777 . + . ID=Thaps260991;biotype=protein_coding;description=DnaJ chaperone [Source:UniProtKB/TrEMBL%3BAcc:B8BR60];external_name=Thaps260991;logic_name=jgi_thaps3 chr1 ensembl transcript 1718699 1719777 . + . ID=Thaps260991;Parent=Thaps260991;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1718699 1718818 . + 0 ID=Thaps260991;Parent=Thaps260991;rank=1 chr1 . exon 1718699 1718818 . + . ID=Thaps260991.1;Parent=Thaps260991;constitutive=1;rank=1 chr1 . CDS 1718942 1719777 . + 0 ID=Thaps260991;Parent=Thaps260991;rank=2 chr1 . exon 1718942 1719777 . + . ID=Thaps260991.2;Parent=Thaps260991;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1723434 1723655 . + . ID=Thaps30976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR61];external_name=Thaps30976;logic_name=jgi_thaps3 chr1 ensembl transcript 1723434 1723655 . + . ID=Thaps30976;Parent=Thaps30976;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1723434 1723655 . + 0 ID=Thaps30976;Parent=Thaps30976;rank=1 chr1 . exon 1723434 1723655 . + . ID=Thaps30976.1;Parent=Thaps30976;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1726241 1730278 . - . ID=Thaps20864;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR63];external_name=Thaps20864;logic_name=jgi_thaps3 chr1 ensembl transcript 1726241 1730278 . - . ID=Thaps20864;Parent=Thaps20864;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1726241 1730278 . - 0 ID=Thaps20864;Parent=Thaps20864;rank=1 chr1 . exon 1726241 1730278 . - . ID=Thaps20864.1;Parent=Thaps20864;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1730770 1741414 . - . ID=Thaps20865;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR64];external_name=Thaps20865;logic_name=jgi_thaps3 chr1 ensembl transcript 1730770 1741414 . - . ID=Thaps20865;Parent=Thaps20865;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1730770 1731429 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=11 chr1 . exon 1730770 1731429 . - . ID=Thaps20865.11;Parent=Thaps20865;constitutive=1;rank=11 chr1 . CDS 1731503 1732862 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=10 chr1 . exon 1731503 1732862 . - . ID=Thaps20865.10;Parent=Thaps20865;constitutive=1;ensembl_end_phase=1;rank=10 chr1 . CDS 1732936 1733075 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=9 chr1 . exon 1732936 1733075 . - . ID=Thaps20865.9;Parent=Thaps20865;constitutive=1;ensembl_end_phase=2;rank=9 chr1 . CDS 1733155 1734697 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=8 chr1 . exon 1733155 1734697 . - . ID=Thaps20865.8;Parent=Thaps20865;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . CDS 1734775 1735148 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=7 chr1 . exon 1734775 1735148 . - . ID=Thaps20865.7;Parent=Thaps20865;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 1735206 1736027 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=6 chr1 . exon 1735206 1736027 . - . ID=Thaps20865.6;Parent=Thaps20865;constitutive=1;rank=6 chr1 . CDS 1736265 1736660 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=5 chr1 . CDS 1736974 1737237 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=4 chr1 . CDS 1737312 1737382 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=3 chr1 . CDS 1737610 1741118 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=2 chr1 . CDS 1741152 1741414 . - 0 ID=Thaps20865;Parent=Thaps20865;rank=1 chr1 . exon 1736265 1736660 . - . ID=Thaps20865.5;Parent=Thaps20865;constitutive=1;rank=5 chr1 . exon 1736974 1737237 . - . ID=Thaps20865.4;Parent=Thaps20865;constitutive=1;rank=4 chr1 . exon 1737312 1737382 . - . ID=Thaps20865.3;Parent=Thaps20865;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 1737610 1741118 . - . ID=Thaps20865.2;Parent=Thaps20865;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 1741152 1741414 . - . ID=Thaps20865.1;Parent=Thaps20865;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1741984 1743012 . - . ID=Thaps20866;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR65];external_name=Thaps20866;logic_name=jgi_thaps3 chr1 ensembl transcript 1741984 1743012 . - . ID=Thaps20866;Parent=Thaps20866;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1741984 1742151 . - 0 ID=Thaps20866;Parent=Thaps20866;rank=2 chr1 . exon 1741984 1742151 . - . ID=Thaps20866.2;Parent=Thaps20866;constitutive=1;rank=2 chr1 . CDS 1742314 1743012 . - 0 ID=Thaps20866;Parent=Thaps20866;rank=1 chr1 . exon 1742314 1743012 . - . ID=Thaps20866.1;Parent=Thaps20866;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1744366 1747268 . + . ID=Thaps31108;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR66];external_name=Thaps31108;logic_name=jgi_thaps3 chr1 ensembl transcript 1744366 1747268 . + . ID=Thaps31108;Parent=Thaps31108;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1744366 1744769 . + 0 ID=Thaps31108;Parent=Thaps31108;rank=1 chr1 . exon 1744366 1744769 . + . ID=Thaps31108.1;Parent=Thaps31108;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1744842 1745296 . + 0 ID=Thaps31108;Parent=Thaps31108;rank=2 chr1 . exon 1744842 1745296 . + . ID=Thaps31108.2;Parent=Thaps31108;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1745376 1746514 . + 0 ID=Thaps31108;Parent=Thaps31108;rank=3 chr1 . exon 1745376 1746514 . + . ID=Thaps31108.3;Parent=Thaps31108;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1746602 1746972 . + 0 ID=Thaps31108;Parent=Thaps31108;rank=4 chr1 . CDS 1747148 1747268 . + 0 ID=Thaps31108;Parent=Thaps31108;rank=5 chr1 ensembl protein_coding_gene 1747380 1748762 . - . ID=Thaps1520;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR67];external_name=Thaps1520;logic_name=jgi_thaps3 chr1 ensembl transcript 1747380 1748762 . - . ID=Thaps1520;Parent=Thaps1520;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1747380 1748080 . - 0 ID=Thaps1520;Parent=Thaps1520;rank=2 chr1 . exon 1747380 1748080 . - . ID=Thaps1520.2;Parent=Thaps1520;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1748162 1748762 . - 0 ID=Thaps1520;Parent=Thaps1520;rank=1 chr1 . exon 1748162 1748762 . - . ID=Thaps1520.1;Parent=Thaps1520;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1749899 1752921 . + . ID=Thaps20868;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR68];external_name=Thaps20868;logic_name=jgi_thaps3 chr1 ensembl transcript 1749899 1752921 . + . ID=Thaps20868;Parent=Thaps20868;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1749899 1749954 . + 0 ID=Thaps20868;Parent=Thaps20868;rank=1 chr1 . exon 1749899 1749954 . + . ID=Thaps20868.1;Parent=Thaps20868;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1749979 1752062 . + 0 ID=Thaps20868;Parent=Thaps20868;rank=2 chr1 . exon 1749979 1752062 . + . ID=Thaps20868.2;Parent=Thaps20868;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1752134 1752921 . + 0 ID=Thaps20868;Parent=Thaps20868;rank=3 chr1 . exon 1752134 1752921 . + . ID=Thaps20868.3;Parent=Thaps20868;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1753047 1756890 . - . ID=Thaps20869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR69];external_name=Thaps20869;logic_name=jgi_thaps3 chr1 ensembl transcript 1753047 1756890 . - . ID=Thaps20869;Parent=Thaps20869;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1753047 1753097 . - 0 ID=Thaps20869;Parent=Thaps20869;rank=3 chr1 . exon 1753047 1753097 . - . ID=Thaps20869.3;Parent=Thaps20869;constitutive=1;rank=3 chr1 . CDS 1753147 1753818 . - 0 ID=Thaps20869;Parent=Thaps20869;rank=2 chr1 . exon 1753147 1753818 . - . ID=Thaps20869.2;Parent=Thaps20869;constitutive=1;rank=2 chr1 . CDS 1754002 1756890 . - 0 ID=Thaps20869;Parent=Thaps20869;rank=1 chr1 . exon 1754002 1756890 . - . ID=Thaps20869.1;Parent=Thaps20869;constitutive=1;rank=1 chr1 . exon 1746602 1746972 . + . ID=Thaps31108.4;Parent=Thaps31108;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 1747148 1747268 . + . ID=Thaps31108.5;Parent=Thaps31108;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . repeat_region 1759852 1759915 . ? . description=dust chr1 . biological_region 1763861 1763862 0.999 + . logic_name=eponine chr1 ensembl protein_coding_gene 1757278 1758204 . - . ID=Thaps14924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR70];external_name=Thaps14924;logic_name=jgi_thaps3 chr1 ensembl transcript 1757278 1758204 . - . ID=Thaps14924;Parent=Thaps14924;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1757278 1757532 . - 0 ID=Thaps14924;Parent=Thaps14924;rank=3 chr1 . exon 1757278 1757532 . - . ID=Thaps14924.3;Parent=Thaps14924;constitutive=1;rank=3 chr1 . CDS 1757614 1758060 . - 0 ID=Thaps14924;Parent=Thaps14924;rank=2 chr1 . exon 1757614 1758060 . - . ID=Thaps14924.2;Parent=Thaps14924;constitutive=1;rank=2 chr1 . CDS 1758106 1758204 . - 0 ID=Thaps14924;Parent=Thaps14924;rank=1 chr1 . exon 1758106 1758204 . - . ID=Thaps14924.1;Parent=Thaps14924;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1764074 1765273 . + . ID=Thaps1526;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR72];external_name=Thaps1526;logic_name=jgi_thaps3 chr1 ensembl transcript 1764074 1765273 . + . ID=Thaps1526;Parent=Thaps1526;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1764074 1765273 . + 0 ID=Thaps1526;Parent=Thaps1526;rank=1 chr1 . exon 1764074 1765273 . + . ID=Thaps1526.1;Parent=Thaps1526;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1759335 1763650 . - . ID=Thaps20870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR71];external_name=Thaps20870;logic_name=jgi_thaps3 chr1 ensembl transcript 1759335 1763650 . - . ID=Thaps20870;Parent=Thaps20870;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1759335 1760393 . - 0 ID=Thaps20870;Parent=Thaps20870;rank=6 chr1 . exon 1759335 1760393 . - . ID=Thaps20870.6;Parent=Thaps20870;constitutive=1;rank=6 chr1 . CDS 1760440 1760543 . - 0 ID=Thaps20870;Parent=Thaps20870;rank=5 chr1 . exon 1760440 1760543 . - . ID=Thaps20870.5;Parent=Thaps20870;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 1760740 1760773 . - 0 ID=Thaps20870;Parent=Thaps20870;rank=4 chr1 . exon 1760740 1760773 . - . ID=Thaps20870.4;Parent=Thaps20870;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 1760996 1761212 . - 0 ID=Thaps20870;Parent=Thaps20870;rank=3 chr1 . exon 1760996 1761212 . - . ID=Thaps20870.3;Parent=Thaps20870;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1761279 1761447 . - 0 ID=Thaps20870;Parent=Thaps20870;rank=2 chr1 . exon 1761279 1761447 . - . ID=Thaps20870.2;Parent=Thaps20870;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1761700 1763650 . - 0 ID=Thaps20870;Parent=Thaps20870;rank=1 chr1 . exon 1761700 1763650 . - . ID=Thaps20870.1;Parent=Thaps20870;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1765457 1765699 . - . ID=Thaps31562;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR73];external_name=Thaps31562;logic_name=jgi_thaps3 chr1 ensembl transcript 1765457 1765699 . - . ID=Thaps31562;Parent=Thaps31562;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1765457 1765699 . - 0 ID=Thaps31562;Parent=Thaps31562;rank=1 chr1 . exon 1765457 1765699 . - . ID=Thaps31562.1;Parent=Thaps31562;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1766298 1766774 . - . ID=Thaps1527;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR74];external_name=Thaps1527;logic_name=jgi_thaps3 chr1 ensembl transcript 1766298 1766774 . - . ID=Thaps1527;Parent=Thaps1527;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1766298 1766774 . - 0 ID=Thaps1527;Parent=Thaps1527;rank=1 chr1 . exon 1766298 1766774 . - . ID=Thaps1527.1;Parent=Thaps1527;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1767558 1768670 . - . ID=Thaps1528;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR75];external_name=Thaps1528;logic_name=jgi_thaps3 chr1 ensembl transcript 1767558 1768670 . - . ID=Thaps1528;Parent=Thaps1528;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1767558 1768670 . - 0 ID=Thaps1528;Parent=Thaps1528;rank=1 chr1 . exon 1767558 1768670 . - . ID=Thaps1528.1;Parent=Thaps1528;constitutive=1;rank=1 chr1 ensembl gene 1770527 1771255 . + . ID=Thaps260997;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 1770527 1771255 . + . ID=Thaps260997;Parent=Thaps260997;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 1770527 1771255 . + . ID=Thaps260997.1;Parent=Thaps260997;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1771934 1773206 . - . ID=Thaps260998;biotype=protein_coding;description=Amino acid transport system [Source:UniProtKB/TrEMBL%3BAcc:B8BR76];external_name=Thaps260998;logic_name=jgi_thaps3 chr1 ensembl transcript 1771934 1773206 . - . ID=Thaps260998;Parent=Thaps260998;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1771934 1771989 . - 0 ID=Thaps260998;Parent=Thaps260998;rank=3 chr1 . exon 1771934 1771989 . - . ID=Thaps260998.3;Parent=Thaps260998;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1772065 1772195 . - 0 ID=Thaps260998;Parent=Thaps260998;rank=2 chr1 . exon 1772065 1772195 . - . ID=Thaps260998.2;Parent=Thaps260998;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1772270 1773206 . - 0 ID=Thaps260998;Parent=Thaps260998;rank=1 chr1 . exon 1772270 1773206 . - . ID=Thaps260998.1;Parent=Thaps260998;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1773776 1775177 . - . ID=Thaps268054;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR77];external_name=Thaps268054;logic_name=jgi_thaps3 chr1 ensembl transcript 1773776 1775177 . - . ID=Thaps268054;Parent=Thaps268054;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1773776 1773897 . - 0 ID=Thaps268054;Parent=Thaps268054;rank=2 chr1 . exon 1773776 1773897 . - . ID=Thaps268054.2;Parent=Thaps268054;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1773977 1775177 . - 0 ID=Thaps268054;Parent=Thaps268054;rank=1 chr1 . exon 1773977 1775177 . - . ID=Thaps268054.1;Parent=Thaps268054;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 1782610 1782648 . ? . description=trf chr1 . repeat_region 1782653 1782678 . ? . description=trf chr1 . repeat_region 1784861 1785075 . - . description=scaffold_4_268_1_674335_675053 chr1 ensembl protein_coding_gene 1780209 1780529 . + . ID=Thaps1533;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR79];external_name=Thaps1533;logic_name=jgi_thaps3 chr1 ensembl transcript 1780209 1780529 . + . ID=Thaps1533;Parent=Thaps1533;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1780209 1780529 . + 0 ID=Thaps1533;Parent=Thaps1533;rank=1 chr1 . exon 1780209 1780529 . + . ID=Thaps1533.1;Parent=Thaps1533;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1777243 1779693 . - . ID=Thaps20873;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR78];external_name=Thaps20873;logic_name=jgi_thaps3 chr1 ensembl transcript 1777243 1779693 . - . ID=Thaps20873;Parent=Thaps20873;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1777243 1779693 . - 0 ID=Thaps20873;Parent=Thaps20873;rank=1 chr1 . exon 1777243 1779693 . - . ID=Thaps20873.1;Parent=Thaps20873;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1780579 1782363 . - . ID=Thaps20874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR80];external_name=Thaps20874;logic_name=jgi_thaps3 chr1 ensembl transcript 1780579 1782363 . - . ID=Thaps20874;Parent=Thaps20874;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1780579 1782363 . - 0 ID=Thaps20874;Parent=Thaps20874;rank=1 chr1 . exon 1780579 1782363 . - . ID=Thaps20874.1;Parent=Thaps20874;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1782907 1784052 . + . ID=Thaps20875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR81];external_name=Thaps20875;logic_name=jgi_thaps3 chr1 ensembl transcript 1782907 1784052 . + . ID=Thaps20875;Parent=Thaps20875;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1782907 1784052 . + 0 ID=Thaps20875;Parent=Thaps20875;rank=1 chr1 . exon 1782907 1784052 . + . ID=Thaps20875.1;Parent=Thaps20875;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1784910 1785065 . + . ID=Thaps261001;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR82];external_name=Thaps261001;logic_name=jgi_thaps3 chr1 ensembl transcript 1784910 1785065 . + . ID=Thaps261001;Parent=Thaps261001;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1784910 1785065 . + 0 ID=Thaps261001;Parent=Thaps261001;rank=1 chr1 . exon 1784910 1785065 . + . ID=Thaps261001.1;Parent=Thaps261001;constitutive=1;rank=1 chr1 . repeat_region 1786806 1786813 . ? . description=dust chr1 . repeat_region 1788574 1788623 . ? . description=dust chr1 ensembl protein_coding_gene 1786126 1787086 . - . ID=Thaps1537;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR83];external_name=Thaps1537;logic_name=jgi_thaps3 chr1 ensembl transcript 1786126 1787086 . - . ID=Thaps1537;Parent=Thaps1537;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1786126 1786652 . - 0 ID=Thaps1537;Parent=Thaps1537;rank=2 chr1 . exon 1786126 1786652 . - . ID=Thaps1537.2;Parent=Thaps1537;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1786867 1787086 . - 0 ID=Thaps1537;Parent=Thaps1537;rank=1 chr1 . exon 1786867 1787086 . - . ID=Thaps1537.1;Parent=Thaps1537;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1788666 1789581 . - . ID=Thaps1539;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR85];external_name=Thaps1539;logic_name=jgi_thaps3 chr1 ensembl transcript 1788666 1789581 . - . ID=Thaps1539;Parent=Thaps1539;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1788666 1788677 . - 0 ID=Thaps1539;Parent=Thaps1539;rank=2 chr1 . exon 1788666 1788677 . - . ID=Thaps1539.2;Parent=Thaps1539;constitutive=1;rank=2 chr1 . CDS 1788706 1789581 . - 0 ID=Thaps1539;Parent=Thaps1539;rank=1 chr1 . exon 1788706 1789581 . - . ID=Thaps1539.1;Parent=Thaps1539;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1790223 1791612 . + . ID=Thaps20877;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR86];external_name=Thaps20877;logic_name=jgi_thaps3 chr1 ensembl transcript 1790223 1791612 . + . ID=Thaps20877;Parent=Thaps20877;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1790223 1790707 . + 0 ID=Thaps20877;Parent=Thaps20877;rank=1 chr1 . exon 1790223 1790707 . + . ID=Thaps20877.1;Parent=Thaps20877;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1790874 1791006 . + 0 ID=Thaps20877;Parent=Thaps20877;rank=2 chr1 . exon 1790874 1791006 . + . ID=Thaps20877.2;Parent=Thaps20877;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1791094 1791612 . + 0 ID=Thaps20877;Parent=Thaps20877;rank=3 chr1 . exon 1791094 1791612 . + . ID=Thaps20877.3;Parent=Thaps20877;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1795324 1796136 . - . ID=Thaps20879;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR88];external_name=Thaps20879;logic_name=jgi_thaps3 chr1 ensembl transcript 1795324 1796136 . - . ID=Thaps20879;Parent=Thaps20879;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1795324 1795856 . - 0 ID=Thaps20879;Parent=Thaps20879;rank=2 chr1 . exon 1795324 1795856 . - . ID=Thaps20879.2;Parent=Thaps20879;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1795944 1796136 . - 0 ID=Thaps20879;Parent=Thaps20879;rank=1 chr1 ensembl protein_coding_gene 1787214 1788488 . + . ID=Thaps261002;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR84];external_name=Thaps261002;logic_name=jgi_thaps3 chr1 ensembl transcript 1787214 1788488 . + . ID=Thaps261002;Parent=Thaps261002;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1787214 1787258 . + 0 ID=Thaps261002;Parent=Thaps261002;rank=1 chr1 . exon 1787214 1787258 . + . ID=Thaps261002.1;Parent=Thaps261002;constitutive=1;rank=1 chr1 . CDS 1787342 1787597 . + 0 ID=Thaps261002;Parent=Thaps261002;rank=2 chr1 . exon 1787342 1787597 . + . ID=Thaps261002.2;Parent=Thaps261002;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1787640 1788384 . + 0 ID=Thaps261002;Parent=Thaps261002;rank=3 chr1 . exon 1787640 1788384 . + . ID=Thaps261002.3;Parent=Thaps261002;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1788464 1788488 . + 0 ID=Thaps261002;Parent=Thaps261002;rank=4 chr1 . exon 1788464 1788488 . + . ID=Thaps261002.4;Parent=Thaps261002;constitutive=1;ensembl_end_phase=1;rank=4 chr1 ensembl protein_coding_gene 1791972 1795223 . + . ID=Thaps26726;biotype=protein_coding;description=Isoleucine-trna synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BR87];external_name=ITS2;logic_name=jgi_thaps3 chr1 ensembl transcript 1791972 1795223 . + . ID=Thaps26726;Parent=Thaps26726;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1791972 1795223 . + 0 ID=Thaps26726;Parent=Thaps26726;rank=1 chr1 . exon 1791972 1795223 . + . ID=Thaps26726.1;Parent=Thaps26726;constitutive=1;rank=1 chr1 . repeat_region 1803739 1803775 . ? . description=trf chr1 . repeat_region 1804781 1804815 . ? . description=trf chr1 ensembl protein_coding_gene 1796416 1797204 . - . ID=Thaps1543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR89];external_name=Thaps1543;logic_name=jgi_thaps3 chr1 ensembl transcript 1796416 1797204 . - . ID=Thaps1543;Parent=Thaps1543;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1796416 1797204 . - 0 ID=Thaps1543;Parent=Thaps1543;rank=1 chr1 . exon 1796416 1797204 . - . ID=Thaps1543.1;Parent=Thaps1543;constitutive=1;rank=1 chr1 . exon 1795944 1796136 . - . ID=Thaps20879.1;Parent=Thaps20879;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1797701 1799701 . + . ID=Thaps20880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR90];external_name=Thaps20880;logic_name=jgi_thaps3 chr1 ensembl transcript 1797701 1799701 . + . ID=Thaps20880;Parent=Thaps20880;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1797701 1799701 . + 0 ID=Thaps20880;Parent=Thaps20880;rank=1 chr1 . exon 1797701 1799701 . + . ID=Thaps20880.1;Parent=Thaps20880;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1799796 1801175 . - . ID=Thaps20881;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR91];external_name=Thaps20881;logic_name=jgi_thaps3 chr1 ensembl transcript 1799796 1801175 . - . ID=Thaps20881;Parent=Thaps20881;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1799796 1801175 . - 0 ID=Thaps20881;Parent=Thaps20881;rank=1 chr1 . exon 1799796 1801175 . - . ID=Thaps20881.1;Parent=Thaps20881;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1803646 1804398 . - . ID=Thaps39173;biotype=protein_coding;description=V-type h-atpase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BR92];external_name=Thaps39173;logic_name=jgi_thaps3 chr1 ensembl transcript 1803646 1804398 . - . ID=Thaps39173;Parent=Thaps39173;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1803646 1804398 . - 0 ID=Thaps39173;Parent=Thaps39173;rank=1 chr1 . exon 1803646 1804398 . - . ID=Thaps39173.1;Parent=Thaps39173;constitutive=1;rank=1 chr1 . repeat_region 1806038 1806045 . ? . description=dust chr1 . repeat_region 1808191 1808213 . ? . description=dust chr1 . repeat_region 1815539 1815559 . ? . description=dust chr1 ensembl protein_coding_gene 1808624 1810225 . + . ID=Thaps1549;biotype=protein_coding;description=Fatty acid hydroxylase%2C cytochrome P450 [Source:UniProtKB/TrEMBL%3BAcc:B8BR94];external_name=FAH1;logic_name=jgi_thaps3 chr1 ensembl transcript 1808624 1810225 . + . ID=Thaps1549;Parent=Thaps1549;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1808624 1810225 . + 0 ID=Thaps1549;Parent=Thaps1549;rank=1 chr1 . exon 1808624 1810225 . + . ID=Thaps1549.1;Parent=Thaps1549;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1815323 1817890 . + . ID=Thaps1551;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR96];external_name=Thaps1551;logic_name=jgi_thaps3 chr1 ensembl transcript 1815323 1817890 . + . ID=Thaps1551;Parent=Thaps1551;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1815323 1817890 . + 0 ID=Thaps1551;Parent=Thaps1551;rank=1 chr1 . exon 1815323 1817890 . + . ID=Thaps1551.1;Parent=Thaps1551;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1810298 1814710 . - . ID=Thaps20884;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR95];external_name=Thaps20884;logic_name=jgi_thaps3 chr1 ensembl transcript 1810298 1814710 . - . ID=Thaps20884;Parent=Thaps20884;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1810298 1810992 . - 0 ID=Thaps20884;Parent=Thaps20884;rank=6 chr1 . exon 1810298 1810992 . - . ID=Thaps20884.6;Parent=Thaps20884;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 1811063 1811664 . - 0 ID=Thaps20884;Parent=Thaps20884;rank=5 chr1 . exon 1811063 1811664 . - . ID=Thaps20884.5;Parent=Thaps20884;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 1811747 1811952 . - 0 ID=Thaps20884;Parent=Thaps20884;rank=4 chr1 . exon 1811747 1811952 . - . ID=Thaps20884.4;Parent=Thaps20884;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1812027 1812169 . - 0 ID=Thaps20884;Parent=Thaps20884;rank=3 chr1 . exon 1812027 1812169 . - . ID=Thaps20884.3;Parent=Thaps20884;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1812243 1812770 . - 0 ID=Thaps20884;Parent=Thaps20884;rank=2 chr1 . exon 1812243 1812770 . - . ID=Thaps20884.2;Parent=Thaps20884;constitutive=1;rank=2 chr1 . CDS 1812850 1814710 . - 0 ID=Thaps20884;Parent=Thaps20884;rank=1 chr1 . exon 1812850 1814710 . - . ID=Thaps20884.1;Parent=Thaps20884;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1807755 1808231 . - . ID=Thaps268059;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR93];external_name=Thaps268059;logic_name=jgi_thaps3 chr1 ensembl transcript 1807755 1808231 . - . ID=Thaps268059;Parent=Thaps268059;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1807755 1808231 . - 0 ID=Thaps268059;Parent=Thaps268059;rank=1 chr1 . exon 1807755 1808231 . - . ID=Thaps268059.1;Parent=Thaps268059;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1820710 1822834 . - . ID=Thaps1553;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR98];external_name=Thaps1553;logic_name=jgi_thaps3 chr1 ensembl transcript 1820710 1822834 . - . ID=Thaps1553;Parent=Thaps1553;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1820710 1821154 . - 0 ID=Thaps1553;Parent=Thaps1553;rank=2 chr1 . exon 1820710 1821154 . - . ID=Thaps1553.2;Parent=Thaps1553;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1821231 1822834 . - 0 ID=Thaps1553;Parent=Thaps1553;rank=1 chr1 . exon 1821231 1822834 . - . ID=Thaps1553.1;Parent=Thaps1553;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1823548 1827535 . + . ID=Thaps1554;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR99];external_name=Thaps1554;logic_name=jgi_thaps3 chr1 ensembl transcript 1823548 1827535 . + . ID=Thaps1554;Parent=Thaps1554;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1823548 1825764 . + 0 ID=Thaps1554;Parent=Thaps1554;rank=1 chr1 . exon 1823548 1825764 . + . ID=Thaps1554.1;Parent=Thaps1554;constitutive=1;rank=1 chr1 . CDS 1825852 1827382 . + 0 ID=Thaps1554;Parent=Thaps1554;rank=2 chr1 . CDS 1827459 1827535 . + 0 ID=Thaps1554;Parent=Thaps1554;rank=3 chr1 ensembl protein_coding_gene 1819195 1820265 . - . ID=Thaps268060;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BR97];external_name=Thaps268060;logic_name=jgi_thaps3 chr1 ensembl transcript 1819195 1820265 . - . ID=Thaps268060;Parent=Thaps268060;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1819195 1820265 . - 0 ID=Thaps268060;Parent=Thaps268060;rank=1 chr1 . exon 1819195 1820265 . - . ID=Thaps268060.1;Parent=Thaps268060;constitutive=1;rank=1 chr1 . repeat_region 1829899 1829912 . ? . description=dust chr1 . exon 1825852 1827382 . + . ID=Thaps1554.2;Parent=Thaps1554;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 1827459 1827535 . + . ID=Thaps1554.3;Parent=Thaps1554;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1827755 1829164 . - . ID=Thaps1555;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRA0];external_name=Thaps1555;logic_name=jgi_thaps3 chr1 ensembl transcript 1827755 1829164 . - . ID=Thaps1555;Parent=Thaps1555;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1827755 1829164 . - 0 ID=Thaps1555;Parent=Thaps1555;rank=1 chr1 . exon 1827755 1829164 . - . ID=Thaps1555.1;Parent=Thaps1555;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1832096 1832830 . + . ID=Thaps1557;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRA3];external_name=Thaps1557;logic_name=jgi_thaps3 chr1 ensembl transcript 1832096 1832830 . + . ID=Thaps1557;Parent=Thaps1557;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1832096 1832830 . + 0 ID=Thaps1557;Parent=Thaps1557;rank=1 chr1 . exon 1832096 1832830 . + . ID=Thaps1557.1;Parent=Thaps1557;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1833016 1836289 . - . ID=Thaps20887;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRA4];external_name=Thaps20887;logic_name=jgi_thaps3 chr1 ensembl transcript 1833016 1836289 . - . ID=Thaps20887;Parent=Thaps20887;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1833016 1833041 . - 0 ID=Thaps20887;Parent=Thaps20887;rank=2 chr1 . exon 1833016 1833041 . - . ID=Thaps20887.2;Parent=Thaps20887;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1833064 1836289 . - 0 ID=Thaps20887;Parent=Thaps20887;rank=1 chr1 . exon 1833064 1836289 . - . ID=Thaps20887.1;Parent=Thaps20887;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1830455 1831642 . + . ID=Thaps268062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRA2];external_name=Thaps268062;logic_name=jgi_thaps3 chr1 ensembl transcript 1830455 1831642 . + . ID=Thaps268062;Parent=Thaps268062;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1830455 1830731 . + 0 ID=Thaps268062;Parent=Thaps268062;rank=1 chr1 . exon 1830455 1830731 . + . ID=Thaps268062.1;Parent=Thaps268062;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1830762 1830800 . + 0 ID=Thaps268062;Parent=Thaps268062;rank=2 chr1 . exon 1830762 1830800 . + . ID=Thaps268062.2;Parent=Thaps268062;constitutive=1;rank=2 chr1 . CDS 1830828 1831642 . + 0 ID=Thaps268062;Parent=Thaps268062;rank=3 chr1 . exon 1830828 1831642 . + . ID=Thaps268062.3;Parent=Thaps268062;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1829298 1829636 . - . ID=Thaps31375;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRA1];external_name=Thaps31375;logic_name=jgi_thaps3 chr1 ensembl transcript 1829298 1829636 . - . ID=Thaps31375;Parent=Thaps31375;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1829298 1829636 . - 0 ID=Thaps31375;Parent=Thaps31375;rank=1 chr1 . exon 1829298 1829636 . - . ID=Thaps31375.1;Parent=Thaps31375;constitutive=1;rank=1 chr1 . repeat_region 1838727 1838754 . ? . description=trf chr1 ensembl tRNA_gene 1838330 1838402 . + . ID=EPrTPOG00000000021;biotype=tRNA;description=tRNA-Ala for anticodon CGC [Source:TRNASCAN_SE%3BAcc:tRNA-Ala];external_name=tRNA-Ala;logic_name=ncrna_eg chr1 ensembl transcript 1838330 1838402 . + . ID=EPrTPOT00000000012;Parent=EPrTPOG00000000021;biotype=tRNA;logic_name=ncrna_eg chr1 ensembl tRNA_gene 1837498 1837570 . + . ID=EPrTPOG00000000054;biotype=tRNA;description=tRNA-Ala for anticodon CGC [Source:TRNASCAN_SE%3BAcc:tRNA-Ala];external_name=tRNA-Ala;logic_name=ncrna_eg chr1 ensembl transcript 1837498 1837570 . + . ID=EPrTPOT00000000054;Parent=EPrTPOG00000000054;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 1838330 1838402 . + . ID=EPrTPOE00000000021;Parent=EPrTPOT00000000012;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . exon 1837498 1837570 . + . ID=EPrTPOE00000000054;Parent=EPrTPOT00000000054;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1845034 1846356 . + . ID=Thaps1563;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRA9];external_name=Thaps1563;logic_name=jgi_thaps3 chr1 ensembl transcript 1845034 1846356 . + . ID=Thaps1563;Parent=Thaps1563;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1845034 1846356 . + 0 ID=Thaps1563;Parent=Thaps1563;rank=1 chr1 . exon 1845034 1846356 . + . ID=Thaps1563.1;Parent=Thaps1563;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1836671 1837402 . - . ID=Thaps20888;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRA5];external_name=Thaps20888;logic_name=jgi_thaps3 chr1 ensembl transcript 1836671 1837402 . - . ID=Thaps20888;Parent=Thaps20888;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1836671 1837402 . - 0 ID=Thaps20888;Parent=Thaps20888;rank=1 chr1 . exon 1836671 1837402 . - . ID=Thaps20888.1;Parent=Thaps20888;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1838869 1840549 . + . ID=Thaps20889;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRA6];external_name=Thaps20889;logic_name=jgi_thaps3 chr1 ensembl transcript 1838869 1840549 . + . ID=Thaps20889;Parent=Thaps20889;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1838869 1839202 . + 0 ID=Thaps20889;Parent=Thaps20889;rank=1 chr1 . exon 1838869 1839202 . + . ID=Thaps20889.1;Parent=Thaps20889;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1839299 1840106 . + 0 ID=Thaps20889;Parent=Thaps20889;rank=2 chr1 . exon 1839299 1840106 . + . ID=Thaps20889.2;Parent=Thaps20889;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1840186 1840549 . + 0 ID=Thaps20889;Parent=Thaps20889;rank=3 chr1 . exon 1840186 1840549 . + . ID=Thaps20889.3;Parent=Thaps20889;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 1843529 1844053 . - . ID=Thaps261017;biotype=protein_coding;description=O-methyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BRA8];external_name=Thaps261017;logic_name=jgi_thaps3 chr1 ensembl transcript 1843529 1844053 . - . ID=Thaps261017;Parent=Thaps261017;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1843529 1844053 . - 0 ID=Thaps261017;Parent=Thaps261017;rank=1 chr1 . exon 1843529 1844053 . - . ID=Thaps261017.1;Parent=Thaps261017;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1841686 1843080 . - . ID=Thaps268064;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRA7];external_name=Thaps268064;logic_name=jgi_thaps3 chr1 ensembl transcript 1841686 1843080 . - . ID=Thaps268064;Parent=Thaps268064;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1841686 1843080 . - 0 ID=Thaps268064;Parent=Thaps268064;rank=1 chr1 . exon 1841686 1843080 . - . ID=Thaps268064.1;Parent=Thaps268064;constitutive=1;rank=1 chr1 . repeat_region 1848116 1848136 . ? . description=dust chr1 ensembl protein_coding_gene 1847345 1848100 . + . ID=Thaps1564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRB0];external_name=Thaps1564;logic_name=jgi_thaps3 chr1 ensembl transcript 1847345 1848100 . + . ID=Thaps1564;Parent=Thaps1564;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1847345 1848100 . + 0 ID=Thaps1564;Parent=Thaps1564;rank=1 chr1 . exon 1847345 1848100 . + . ID=Thaps1564.1;Parent=Thaps1564;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1853006 1855896 . - . ID=Thaps1566;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRB3];external_name=Thaps1566;logic_name=jgi_thaps3 chr1 ensembl transcript 1853006 1855896 . - . ID=Thaps1566;Parent=Thaps1566;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1853006 1854768 . - 0 ID=Thaps1566;Parent=Thaps1566;rank=2 chr1 . exon 1853006 1854768 . - . ID=Thaps1566.2;Parent=Thaps1566;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1854888 1855896 . - 0 ID=Thaps1566;Parent=Thaps1566;rank=1 chr1 . exon 1854888 1855896 . - . ID=Thaps1566.1;Parent=Thaps1566;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1850792 1852465 . - . ID=Thaps261018;biotype=protein_coding;description=3'%2C5'-cyclic nucleotide phosphodiesterase [Source:UniProtKB/TrEMBL%3BAcc:B8BRB2];external_name=Thaps261018;logic_name=jgi_thaps3 chr1 ensembl transcript 1850792 1852465 . - . ID=Thaps261018;Parent=Thaps261018;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1850792 1852465 . - 0 ID=Thaps261018;Parent=Thaps261018;rank=1 chr1 . exon 1850792 1852465 . - . ID=Thaps261018.1;Parent=Thaps261018;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1848758 1849426 . - . ID=Thaps31075;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRB1];external_name=Thaps31075;logic_name=jgi_thaps3 chr1 ensembl transcript 1848758 1849426 . - . ID=Thaps31075;Parent=Thaps31075;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1848758 1849426 . - 0 ID=Thaps31075;Parent=Thaps31075;rank=1 chr1 . exon 1848758 1849426 . - . ID=Thaps31075.1;Parent=Thaps31075;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1861827 1862972 . + . ID=Thaps1568;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRB5];external_name=Thaps1568;logic_name=jgi_thaps3 chr1 ensembl transcript 1861827 1862972 . + . ID=Thaps1568;Parent=Thaps1568;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1861827 1862972 . + 0 ID=Thaps1568;Parent=Thaps1568;rank=1 chr1 . exon 1861827 1862972 . + . ID=Thaps1568.1;Parent=Thaps1568;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1863065 1865497 . - . ID=Thaps1569;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRB6];external_name=Thaps1569;logic_name=jgi_thaps3 chr1 ensembl transcript 1863065 1865497 . - . ID=Thaps1569;Parent=Thaps1569;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1863065 1863246 . - 0 ID=Thaps1569;Parent=Thaps1569;rank=8 chr1 . exon 1863065 1863246 . - . ID=Thaps1569.8;Parent=Thaps1569;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . CDS 1863277 1863308 . - 0 ID=Thaps1569;Parent=Thaps1569;rank=7 chr1 . exon 1863277 1863308 . - . ID=Thaps1569.7;Parent=Thaps1569;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 1863370 1863628 . - 0 ID=Thaps1569;Parent=Thaps1569;rank=6 chr1 . exon 1863370 1863628 . - . ID=Thaps1569.6;Parent=Thaps1569;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 1863715 1863786 . - 0 ID=Thaps1569;Parent=Thaps1569;rank=5 chr1 . exon 1863715 1863786 . - . ID=Thaps1569.5;Parent=Thaps1569;constitutive=1;rank=5 chr1 . CDS 1863880 1863951 . - 0 ID=Thaps1569;Parent=Thaps1569;rank=4 chr1 . exon 1863880 1863951 . - . ID=Thaps1569.4;Parent=Thaps1569;constitutive=1;rank=4 chr1 . CDS 1864129 1864247 . - 0 ID=Thaps1569;Parent=Thaps1569;rank=3 chr1 . exon 1864129 1864247 . - . ID=Thaps1569.3;Parent=Thaps1569;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1864526 1865106 . - 0 ID=Thaps1569;Parent=Thaps1569;rank=2 chr1 . exon 1864526 1865106 . - . ID=Thaps1569.2;Parent=Thaps1569;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1865186 1865497 . - 0 ID=Thaps1569;Parent=Thaps1569;rank=1 chr1 . exon 1865186 1865497 . - . ID=Thaps1569.1;Parent=Thaps1569;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1856420 1857741 . - . ID=Thaps261019;biotype=protein_coding;description=Ubiquitin protein ligase [Source:UniProtKB/TrEMBL%3BAcc:B8BRB4];external_name=Thaps261019;logic_name=jgi_thaps3 chr1 ensembl transcript 1856420 1857741 . - . ID=Thaps261019;Parent=Thaps261019;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1856420 1856829 . - 0 ID=Thaps261019;Parent=Thaps261019;rank=3 chr1 . exon 1856420 1856829 . - . ID=Thaps261019.3;Parent=Thaps261019;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1856910 1857188 . - 0 ID=Thaps261019;Parent=Thaps261019;rank=2 chr1 . exon 1856910 1857188 . - . ID=Thaps261019.2;Parent=Thaps261019;constitutive=1;rank=2 chr1 . CDS 1857253 1857741 . - 0 ID=Thaps261019;Parent=Thaps261019;rank=1 chr1 . exon 1857253 1857741 . - . ID=Thaps261019.1;Parent=Thaps261019;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1865843 1867693 . - . ID=Thaps20891;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRB7];external_name=Thaps20891;logic_name=jgi_thaps3 chr1 ensembl transcript 1865843 1867693 . - . ID=Thaps20891;Parent=Thaps20891;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1865843 1867693 . - 0 ID=Thaps20891;Parent=Thaps20891;rank=1 chr1 . exon 1865843 1867693 . - . ID=Thaps20891.1;Parent=Thaps20891;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1867938 1869218 . + . ID=Thaps20892;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRB8];external_name=Thaps20892;logic_name=jgi_thaps3 chr1 ensembl transcript 1867938 1869218 . + . ID=Thaps20892;Parent=Thaps20892;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1867938 1869218 . + 0 ID=Thaps20892;Parent=Thaps20892;rank=1 chr1 . exon 1867938 1869218 . + . ID=Thaps20892.1;Parent=Thaps20892;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1870277 1871997 . + . ID=Thaps20893;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRC0];external_name=Thaps20893;logic_name=jgi_thaps3 chr1 ensembl transcript 1870277 1871997 . + . ID=Thaps20893;Parent=Thaps20893;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1870277 1871050 . + 0 ID=Thaps20893;Parent=Thaps20893;rank=1 chr1 . exon 1870277 1871050 . + . ID=Thaps20893.1;Parent=Thaps20893;constitutive=1;rank=1 chr1 . CDS 1871137 1871997 . + 0 ID=Thaps20893;Parent=Thaps20893;rank=2 chr1 . exon 1871137 1871997 . + . ID=Thaps20893.2;Parent=Thaps20893;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1872363 1872793 . - . ID=Thaps261023;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRC1];external_name=Thaps261023;logic_name=jgi_thaps3 chr1 ensembl transcript 1872363 1872793 . - . ID=Thaps261023;Parent=Thaps261023;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1872363 1872793 . - 0 ID=Thaps261023;Parent=Thaps261023;rank=1 chr1 . exon 1872363 1872793 . - . ID=Thaps261023.1;Parent=Thaps261023;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 1874555 1875934 . + . ID=Thaps261024;biotype=protein_coding;description=Serine carboxypeptidase [Source:UniProtKB/TrEMBL%3BAcc:B8BRC2];external_name=Thaps261024;logic_name=jgi_thaps3 chr1 ensembl transcript 1874555 1875934 . + . ID=Thaps261024;Parent=Thaps261024;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1874555 1874916 . + 0 ID=Thaps261024;Parent=Thaps261024;rank=1 chr1 . exon 1874555 1874916 . + . ID=Thaps261024.1;Parent=Thaps261024;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1874941 1875072 . + 0 ID=Thaps261024;Parent=Thaps261024;rank=2 chr1 . exon 1874941 1875072 . + . ID=Thaps261024.2;Parent=Thaps261024;constitutive=1;rank=2 chr1 . CDS 1875130 1875598 . + 0 ID=Thaps261024;Parent=Thaps261024;rank=3 chr1 . exon 1875130 1875598 . + . ID=Thaps261024.3;Parent=Thaps261024;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1875641 1875775 . + 0 ID=Thaps261024;Parent=Thaps261024;rank=4 chr1 . CDS 1875794 1875934 . + 0 ID=Thaps261024;Parent=Thaps261024;rank=5 chr1 ensembl protein_coding_gene 1869525 1869992 . - . ID=Thaps30862;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRB9];external_name=Thaps30862;logic_name=jgi_thaps3 chr1 ensembl transcript 1869525 1869992 . - . ID=Thaps30862;Parent=Thaps30862;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1869525 1869796 . - 0 ID=Thaps30862;Parent=Thaps30862;rank=2 chr1 . exon 1869525 1869796 . - . ID=Thaps30862.2;Parent=Thaps30862;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1869869 1869992 . - 0 ID=Thaps30862;Parent=Thaps30862;rank=1 chr1 . exon 1869869 1869992 . - . ID=Thaps30862.1;Parent=Thaps30862;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 1881012 1881054 . ? . description=trf chr1 ensembl protein_coding_gene 1883455 1886270 . + . ID=Thaps20899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRC7];external_name=Thaps20899;logic_name=jgi_thaps3 chr1 ensembl transcript 1883455 1886270 . + . ID=Thaps20899;Parent=Thaps20899;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1883455 1884616 . + 0 ID=Thaps20899;Parent=Thaps20899;rank=1 chr1 . exon 1883455 1884616 . + . ID=Thaps20899.1;Parent=Thaps20899;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1884704 1885719 . + 0 ID=Thaps20899;Parent=Thaps20899;rank=2 chr1 . exon 1884704 1885719 . + . ID=Thaps20899.2;Parent=Thaps20899;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1885821 1886270 . + 0 ID=Thaps20899;Parent=Thaps20899;rank=3 chr1 . exon 1875641 1875775 . + . ID=Thaps261024.4;Parent=Thaps261024;constitutive=1;rank=4 chr1 . exon 1875794 1875934 . + . ID=Thaps261024.5;Parent=Thaps261024;constitutive=1;rank=5 chr1 ensembl protein_coding_gene 1880215 1880370 . - . ID=Thaps261027;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRC5];external_name=Thaps261027;logic_name=jgi_thaps3 chr1 ensembl transcript 1880215 1880370 . - . ID=Thaps261027;Parent=Thaps261027;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1880215 1880370 . - 0 ID=Thaps261027;Parent=Thaps261027;rank=1 chr1 . exon 1880215 1880370 . - . ID=Thaps261027.1;Parent=Thaps261027;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1878438 1879992 . - . ID=Thaps268068;biotype=protein_coding;description=Aspartate-trna ligase [Source:UniProtKB/TrEMBL%3BAcc:B8BRC4];external_name=Thaps268068;logic_name=jgi_thaps3 chr1 ensembl transcript 1878438 1879992 . - . ID=Thaps268068;Parent=Thaps268068;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1878438 1878719 . - 0 ID=Thaps268068;Parent=Thaps268068;rank=4 chr1 . exon 1878438 1878719 . - . ID=Thaps268068.4;Parent=Thaps268068;constitutive=1;rank=4 chr1 . CDS 1878802 1879526 . - 0 ID=Thaps268068;Parent=Thaps268068;rank=3 chr1 . exon 1878802 1879526 . - . ID=Thaps268068.3;Parent=Thaps268068;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1879554 1879781 . - 0 ID=Thaps268068;Parent=Thaps268068;rank=2 chr1 . exon 1879554 1879781 . - . ID=Thaps268068.2;Parent=Thaps268068;constitutive=1;rank=2 chr1 . CDS 1879800 1879992 . - 0 ID=Thaps268068;Parent=Thaps268068;rank=1 chr1 . exon 1879800 1879992 . - . ID=Thaps268068.1;Parent=Thaps268068;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1880782 1882796 . - . ID=Thaps268070;biotype=protein_coding;description=Threonine synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BRC6];external_name=Thaps268070;logic_name=jgi_thaps3 chr1 ensembl transcript 1880782 1882796 . - . ID=Thaps268070;Parent=Thaps268070;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1880782 1881324 . - 0 ID=Thaps268070;Parent=Thaps268070;rank=6 chr1 . exon 1880782 1881324 . - . ID=Thaps268070.6;Parent=Thaps268070;constitutive=1;rank=6 chr1 . CDS 1881395 1881480 . - 0 ID=Thaps268070;Parent=Thaps268070;rank=5 chr1 . exon 1881395 1881480 . - . ID=Thaps268070.5;Parent=Thaps268070;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 1881567 1881713 . - 0 ID=Thaps268070;Parent=Thaps268070;rank=4 chr1 . exon 1881567 1881713 . - . ID=Thaps268070.4;Parent=Thaps268070;constitutive=1;rank=4 chr1 . CDS 1881920 1882014 . - 0 ID=Thaps268070;Parent=Thaps268070;rank=3 chr1 . exon 1881920 1882014 . - . ID=Thaps268070.3;Parent=Thaps268070;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1882054 1882499 . - 0 ID=Thaps268070;Parent=Thaps268070;rank=2 chr1 . exon 1882054 1882499 . - . ID=Thaps268070.2;Parent=Thaps268070;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1882617 1882796 . - 0 ID=Thaps268070;Parent=Thaps268070;rank=1 chr1 . exon 1882617 1882796 . - . ID=Thaps268070.1;Parent=Thaps268070;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1876716 1877321 . - . ID=Thaps31215;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRC3];external_name=Thaps31215;logic_name=jgi_thaps3 chr1 ensembl transcript 1876716 1877321 . - . ID=Thaps31215;Parent=Thaps31215;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1876716 1877059 . - 0 ID=Thaps31215;Parent=Thaps31215;rank=2 chr1 . exon 1876716 1877059 . - . ID=Thaps31215.2;Parent=Thaps31215;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1877213 1877321 . - 0 ID=Thaps31215;Parent=Thaps31215;rank=1 chr1 . exon 1877213 1877321 . - . ID=Thaps31215.1;Parent=Thaps31215;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1895432 1896650 . + . ID=Thaps1584;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRD2];external_name=Thaps1584;logic_name=jgi_thaps3 chr1 ensembl transcript 1895432 1896650 . + . ID=Thaps1584;Parent=Thaps1584;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1895432 1895788 . + 0 ID=Thaps1584;Parent=Thaps1584;rank=1 chr1 . exon 1895432 1895788 . + . ID=Thaps1584.1;Parent=Thaps1584;constitutive=1;rank=1 chr1 . CDS 1895888 1895973 . + 0 ID=Thaps1584;Parent=Thaps1584;rank=2 chr1 . CDS 1896089 1896277 . + 0 ID=Thaps1584;Parent=Thaps1584;rank=3 chr1 . CDS 1896366 1896391 . + 0 ID=Thaps1584;Parent=Thaps1584;rank=4 chr1 . CDS 1896520 1896650 . + 0 ID=Thaps1584;Parent=Thaps1584;rank=5 chr1 . exon 1885821 1886270 . + . ID=Thaps20899.3;Parent=Thaps20899;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1894144 1895304 . + . ID=Thaps26743;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRD1];external_name=Thaps26743;logic_name=jgi_thaps3 chr1 ensembl transcript 1894144 1895304 . + . ID=Thaps26743;Parent=Thaps26743;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1894144 1895304 . + 0 ID=Thaps26743;Parent=Thaps26743;rank=1 chr1 . exon 1894144 1895304 . + . ID=Thaps26743.1;Parent=Thaps26743;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1888526 1889500 . + . ID=Thaps31247;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRC9];external_name=Thaps31247;logic_name=jgi_thaps3 chr1 ensembl transcript 1888526 1889500 . + . ID=Thaps31247;Parent=Thaps31247;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1888526 1889500 . + 0 ID=Thaps31247;Parent=Thaps31247;rank=1 chr1 . exon 1888526 1889500 . + . ID=Thaps31247.1;Parent=Thaps31247;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1886849 1887334 . - . ID=Thaps31451;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRC8];external_name=Thaps31451;logic_name=jgi_thaps3 chr1 ensembl transcript 1886849 1887334 . - . ID=Thaps31451;Parent=Thaps31451;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1886849 1887334 . - 0 ID=Thaps31451;Parent=Thaps31451;rank=1 chr1 . exon 1886849 1887334 . - . ID=Thaps31451.1;Parent=Thaps31451;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1891327 1893496 . - . ID=Thaps39187;biotype=protein_coding;description=T-complex protein 1 gamma subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BRD0];external_name=TCP1;logic_name=jgi_thaps3 chr1 ensembl transcript 1891327 1893496 . - . ID=Thaps39187;Parent=Thaps39187;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1891327 1891372 . - 0 ID=Thaps39187;Parent=Thaps39187;rank=4 chr1 . exon 1891327 1891372 . - . ID=Thaps39187.4;Parent=Thaps39187;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 1891463 1892949 . - 0 ID=Thaps39187;Parent=Thaps39187;rank=3 chr1 . exon 1891463 1892949 . - . ID=Thaps39187.3;Parent=Thaps39187;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1893058 1893170 . - 0 ID=Thaps39187;Parent=Thaps39187;rank=2 chr1 . exon 1893058 1893170 . - . ID=Thaps39187.2;Parent=Thaps39187;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1893466 1893496 . - 0 ID=Thaps39187;Parent=Thaps39187;rank=1 chr1 . exon 1893466 1893496 . - . ID=Thaps39187.1;Parent=Thaps39187;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . exon 1895888 1895973 . + . ID=Thaps1584.2;Parent=Thaps1584;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 1896089 1896277 . + . ID=Thaps1584.3;Parent=Thaps1584;constitutive=1;rank=3 chr1 . exon 1896366 1896391 . + . ID=Thaps1584.4;Parent=Thaps1584;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 1896520 1896650 . + . ID=Thaps1584.5;Parent=Thaps1584;constitutive=1;ensembl_end_phase=2;rank=5 chr1 ensembl protein_coding_gene 1897388 1898284 . - . ID=Thaps1585;biotype=protein_coding;description=Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL%3BAcc:B8BRD3];external_name=Thaps1585;logic_name=jgi_thaps3 chr1 ensembl transcript 1897388 1898284 . - . ID=Thaps1585;Parent=Thaps1585;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1897388 1898284 . - 0 ID=Thaps1585;Parent=Thaps1585;rank=1 chr1 . exon 1897388 1898284 . - . ID=Thaps1585.1;Parent=Thaps1585;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1898654 1901133 . - . ID=Thaps1586;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRD4];external_name=Thaps1586;logic_name=jgi_thaps3 chr1 ensembl transcript 1898654 1901133 . - . ID=Thaps1586;Parent=Thaps1586;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1898654 1898806 . - 0 ID=Thaps1586;Parent=Thaps1586;rank=2 chr1 . exon 1898654 1898806 . - . ID=Thaps1586.2;Parent=Thaps1586;constitutive=1;rank=2 chr1 . CDS 1899091 1901133 . - 0 ID=Thaps1586;Parent=Thaps1586;rank=1 chr1 . exon 1899091 1901133 . - . ID=Thaps1586.1;Parent=Thaps1586;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1902614 1903771 . + . ID=Thaps1587;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRD5];external_name=Thaps1587;logic_name=jgi_thaps3 chr1 ensembl transcript 1902614 1903771 . + . ID=Thaps1587;Parent=Thaps1587;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1902614 1903191 . + 0 ID=Thaps1587;Parent=Thaps1587;rank=1 chr1 . exon 1902614 1903191 . + . ID=Thaps1587.1;Parent=Thaps1587;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1903318 1903771 . + 0 ID=Thaps1587;Parent=Thaps1587;rank=2 chr1 . exon 1903318 1903771 . + . ID=Thaps1587.2;Parent=Thaps1587;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 1903957 1905843 . - . ID=Thaps1588;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRD6];external_name=Thaps1588;logic_name=jgi_thaps3 chr1 ensembl transcript 1903957 1905843 . - . ID=Thaps1588;Parent=Thaps1588;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1903957 1905843 . - 0 ID=Thaps1588;Parent=Thaps1588;rank=1 chr1 . exon 1903957 1905843 . - . ID=Thaps1588.1;Parent=Thaps1588;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1906135 1910788 . - . ID=Thaps20903;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRD7];external_name=Thaps20903;logic_name=jgi_thaps3 chr1 ensembl transcript 1906135 1910788 . - . ID=Thaps20903;Parent=Thaps20903;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1906135 1906446 . - 0 ID=Thaps20903;Parent=Thaps20903;rank=5 chr1 . exon 1906135 1906446 . - . ID=Thaps20903.5;Parent=Thaps20903;constitutive=1;rank=5 chr1 . CDS 1906522 1907783 . - 0 ID=Thaps20903;Parent=Thaps20903;rank=4 chr1 . exon 1906522 1907783 . - . ID=Thaps20903.4;Parent=Thaps20903;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1907883 1908478 . - 0 ID=Thaps20903;Parent=Thaps20903;rank=3 chr1 . exon 1907883 1908478 . - . ID=Thaps20903.3;Parent=Thaps20903;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1908556 1909402 . - 0 ID=Thaps20903;Parent=Thaps20903;rank=2 chr1 . exon 1908556 1909402 . - . ID=Thaps20903.2;Parent=Thaps20903;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1909429 1910788 . - 0 ID=Thaps20903;Parent=Thaps20903;rank=1 chr1 . exon 1909429 1910788 . - . ID=Thaps20903.1;Parent=Thaps20903;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1911327 1913528 . + . ID=Thaps20904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRD8];external_name=Thaps20904;logic_name=jgi_thaps3 chr1 ensembl transcript 1911327 1913528 . + . ID=Thaps20904;Parent=Thaps20904;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1911327 1912019 . + 0 ID=Thaps20904;Parent=Thaps20904;rank=1 chr1 . exon 1911327 1912019 . + . ID=Thaps20904.1;Parent=Thaps20904;constitutive=1;rank=1 chr1 . CDS 1912059 1912964 . + 0 ID=Thaps20904;Parent=Thaps20904;rank=2 chr1 . exon 1912059 1912964 . + . ID=Thaps20904.2;Parent=Thaps20904;constitutive=1;rank=2 chr1 . CDS 1913061 1913528 . + 0 ID=Thaps20904;Parent=Thaps20904;rank=3 chr1 . exon 1913061 1913528 . + . ID=Thaps20904.3;Parent=Thaps20904;constitutive=1;rank=3 chr1 . repeat_region 1922594 1922664 . ? . description=trf chr1 . repeat_region 1924126 1924133 . ? . description=dust chr1 . repeat_region 1924721 1924748 . ? . description=trf chr1 . repeat_region 1924721 1924748 . ? . description=dust chr1 ensembl protein_coding_gene 1915416 1917428 . - . ID=Thaps1591;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRD9];external_name=Thaps1591;logic_name=jgi_thaps3 chr1 ensembl transcript 1915416 1917428 . - . ID=Thaps1591;Parent=Thaps1591;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1915416 1917428 . - 0 ID=Thaps1591;Parent=Thaps1591;rank=1 chr1 . exon 1915416 1917428 . - . ID=Thaps1591.1;Parent=Thaps1591;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1921928 1924118 . + . ID=Thaps1594;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRE2];external_name=Thaps1594;logic_name=jgi_thaps3 chr1 ensembl transcript 1921928 1924118 . + . ID=Thaps1594;Parent=Thaps1594;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1921928 1922497 . + 0 ID=Thaps1594;Parent=Thaps1594;rank=1 chr1 . exon 1921928 1922497 . + . ID=Thaps1594.1;Parent=Thaps1594;constitutive=1;rank=1 chr1 . CDS 1922592 1923503 . + 0 ID=Thaps1594;Parent=Thaps1594;rank=2 chr1 . exon 1922592 1923503 . + . ID=Thaps1594.2;Parent=Thaps1594;constitutive=1;rank=2 chr1 . CDS 1923597 1924118 . + 0 ID=Thaps1594;Parent=Thaps1594;rank=3 chr1 . exon 1923597 1924118 . + . ID=Thaps1594.3;Parent=Thaps1594;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 1924514 1928797 . + . ID=Thaps1595;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRE3];external_name=Thaps1595;logic_name=jgi_thaps3 chr1 ensembl transcript 1924514 1928797 . + . ID=Thaps1595;Parent=Thaps1595;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1924514 1927240 . + 0 ID=Thaps1595;Parent=Thaps1595;rank=1 chr1 . exon 1924514 1927240 . + . ID=Thaps1595.1;Parent=Thaps1595;constitutive=1;rank=1 chr1 . CDS 1927332 1927718 . + 0 ID=Thaps1595;Parent=Thaps1595;rank=2 chr1 . CDS 1927809 1927850 . + 0 ID=Thaps1595;Parent=Thaps1595;rank=3 chr1 . CDS 1927934 1928797 . + 0 ID=Thaps1595;Parent=Thaps1595;rank=4 chr1 ensembl protein_coding_gene 1919769 1920709 . + . ID=Thaps20906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRE1];external_name=Thaps20906;logic_name=jgi_thaps3 chr1 ensembl transcript 1919769 1920709 . + . ID=Thaps20906;Parent=Thaps20906;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1919769 1920594 . + 0 ID=Thaps20906;Parent=Thaps20906;rank=1 chr1 . exon 1919769 1920594 . + . ID=Thaps20906.1;Parent=Thaps20906;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1920675 1920709 . + 0 ID=Thaps20906;Parent=Thaps20906;rank=2 chr1 . exon 1920675 1920709 . + . ID=Thaps20906.2;Parent=Thaps20906;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 1918821 1919431 . + . ID=Thaps261036;biotype=protein_coding;description=Receptor protein kinase [Source:UniProtKB/TrEMBL%3BAcc:B8BRE0];external_name=Thaps261036;logic_name=jgi_thaps3 chr1 ensembl transcript 1918821 1919431 . + . ID=Thaps261036;Parent=Thaps261036;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1918821 1919163 . + 0 ID=Thaps261036;Parent=Thaps261036;rank=1 chr1 . exon 1918821 1919163 . + . ID=Thaps261036.1;Parent=Thaps261036;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 1919258 1919431 . + 0 ID=Thaps261036;Parent=Thaps261036;rank=2 chr1 . exon 1919258 1919431 . + . ID=Thaps261036.2;Parent=Thaps261036;constitutive=1;rank=2 chr1 ensembl tRNA_gene 1935038 1935109 . + . ID=EPrTPOG00000000020;biotype=tRNA;description=tRNA-Asp for anticodon GUC [Source:TRNASCAN_SE%3BAcc:tRNA-Asp];external_name=tRNA-Asp;logic_name=ncrna_eg chr1 ensembl transcript 1935038 1935109 . + . ID=EPrTPOT00000000010;Parent=EPrTPOG00000000020;biotype=tRNA;logic_name=ncrna_eg chr1 ensembl tRNA_gene 1934952 1935024 . + . ID=EPrTPOG00000000041;biotype=tRNA;description=tRNA-Gln for anticodon CUG [Source:TRNASCAN_SE%3BAcc:tRNA-Gln];external_name=tRNA-Gln;logic_name=ncrna_eg chr1 ensembl transcript 1934952 1935024 . + . ID=EPrTPOT00000000041;Parent=EPrTPOG00000000041;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 1935038 1935109 . + . ID=EPrTPOE00000000020;Parent=EPrTPOT00000000010;constitutive=1;rank=1 chr1 . exon 1934952 1935024 . + . ID=EPrTPOE00000000041;Parent=EPrTPOT00000000041;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . exon 1927332 1927718 . + . ID=Thaps1595.2;Parent=Thaps1595;constitutive=1;rank=2 chr1 . exon 1927809 1927850 . + . ID=Thaps1595.3;Parent=Thaps1595;constitutive=1;rank=3 chr1 . exon 1927934 1928797 . + . ID=Thaps1595.4;Parent=Thaps1595;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 1933872 1934880 . + . ID=Thaps1597;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRE5];external_name=Thaps1597;logic_name=jgi_thaps3 chr1 ensembl transcript 1933872 1934880 . + . ID=Thaps1597;Parent=Thaps1597;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1933872 1934663 . + 0 ID=Thaps1597;Parent=Thaps1597;rank=1 chr1 . exon 1933872 1934663 . + . ID=Thaps1597.1;Parent=Thaps1597;constitutive=1;rank=1 chr1 . CDS 1934857 1934880 . + 0 ID=Thaps1597;Parent=Thaps1597;rank=2 chr1 . exon 1934857 1934880 . + . ID=Thaps1597.2;Parent=Thaps1597;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 1928887 1933560 . - . ID=Thaps20907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRE4];external_name=Thaps20907;logic_name=jgi_thaps3 chr1 ensembl transcript 1928887 1933560 . - . ID=Thaps20907;Parent=Thaps20907;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1928887 1933560 . - 0 ID=Thaps20907;Parent=Thaps20907;rank=1 chr1 . exon 1928887 1933560 . - . ID=Thaps20907.1;Parent=Thaps20907;constitutive=1;rank=1 chr1 . repeat_region 1938605 1938656 . ? . description=dust chr1 . repeat_region 1938790 1938798 . ? . description=dust chr1 . repeat_region 1938991 1939501 . - . description=Copia9I_TP chr1 . repeat_region 1939596 1940177 . - . description=Copia9I_TP chr1 . repeat_region 1940759 1940768 . ? . description=dust chr1 ensembl protein_coding_gene 1941047 1941658 . + . ID=Thaps1599;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRE7];external_name=Thaps1599;logic_name=jgi_thaps3 chr1 ensembl transcript 1941047 1941658 . + . ID=Thaps1599;Parent=Thaps1599;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1941047 1941658 . + 0 ID=Thaps1599;Parent=Thaps1599;rank=1 chr1 . exon 1941047 1941658 . + . ID=Thaps1599.1;Parent=Thaps1599;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1942146 1943597 . - . ID=Thaps1600;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRE8];external_name=Thaps1600;logic_name=jgi_thaps3 chr1 ensembl transcript 1942146 1943597 . - . ID=Thaps1600;Parent=Thaps1600;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1942146 1943597 . - 0 ID=Thaps1600;Parent=Thaps1600;rank=1 chr1 . exon 1942146 1943597 . - . ID=Thaps1600.1;Parent=Thaps1600;constitutive=1;rank=1 chr1 ensembl gene 1938831 1940245 . - . ID=Thaps261038;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 1938831 1940245 . - . ID=Thaps261038;Parent=Thaps261038;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 1938831 1938834 . - . ID=Thaps261038.4;Parent=Thaps261038;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . exon 1939030 1939396 . - . ID=Thaps261038.3;Parent=Thaps261038;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . exon 1939442 1939515 . - . ID=Thaps261038.2;Parent=Thaps261038;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 1940230 1940245 . - . ID=Thaps261038.1;Parent=Thaps261038;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1937509 1938501 . - . ID=Thaps31006;biotype=protein_coding;description=Light-repressed protein a [Source:UniProtKB/TrEMBL%3BAcc:B8BRE6];external_name=Thaps31006;logic_name=jgi_thaps3 chr1 ensembl transcript 1937509 1938501 . - . ID=Thaps31006;Parent=Thaps31006;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1937509 1937656 . - 0 ID=Thaps31006;Parent=Thaps31006;rank=4 chr1 . exon 1937509 1937656 . - . ID=Thaps31006.4;Parent=Thaps31006;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 1937765 1937940 . - 0 ID=Thaps31006;Parent=Thaps31006;rank=3 chr1 . exon 1937765 1937940 . - . ID=Thaps31006.3;Parent=Thaps31006;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1938097 1938206 . - 0 ID=Thaps31006;Parent=Thaps31006;rank=2 chr1 . exon 1938097 1938206 . - . ID=Thaps31006.2;Parent=Thaps31006;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1938339 1938501 . - 0 ID=Thaps31006;Parent=Thaps31006;rank=1 chr1 . exon 1938339 1938501 . - . ID=Thaps31006.1;Parent=Thaps31006;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1947511 1949358 . + . ID=Thaps1602;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRF0];external_name=Thaps1602;logic_name=jgi_thaps3 chr1 ensembl transcript 1947511 1949358 . + . ID=Thaps1602;Parent=Thaps1602;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1947511 1947663 . + 0 ID=Thaps1602;Parent=Thaps1602;rank=1 chr1 . exon 1947511 1947663 . + . ID=Thaps1602.1;Parent=Thaps1602;constitutive=1;rank=1 chr1 . CDS 1947700 1948079 . + 0 ID=Thaps1602;Parent=Thaps1602;rank=2 chr1 . exon 1947700 1948079 . + . ID=Thaps1602.2;Parent=Thaps1602;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1948170 1949358 . + 0 ID=Thaps1602;Parent=Thaps1602;rank=3 chr1 . exon 1948170 1949358 . + . ID=Thaps1602.3;Parent=Thaps1602;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 1952890 1954714 . - . ID=Thaps20909;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRF2];external_name=Thaps20909;logic_name=jgi_thaps3 chr1 ensembl transcript 1952890 1954714 . - . ID=Thaps20909;Parent=Thaps20909;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1952890 1953308 . - 0 ID=Thaps20909;Parent=Thaps20909;rank=3 chr1 . exon 1952890 1953308 . - . ID=Thaps20909.3;Parent=Thaps20909;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 1953363 1954457 . - 0 ID=Thaps20909;Parent=Thaps20909;rank=2 chr1 . exon 1953363 1954457 . - . ID=Thaps20909.2;Parent=Thaps20909;constitutive=1;rank=2 chr1 . CDS 1954507 1954714 . - 0 ID=Thaps20909;Parent=Thaps20909;rank=1 chr1 . exon 1954507 1954714 . - . ID=Thaps20909.1;Parent=Thaps20909;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1946410 1947073 . - . ID=Thaps261040;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRE9];external_name=Thaps261040;logic_name=jgi_thaps3 chr1 ensembl transcript 1946410 1947073 . - . ID=Thaps261040;Parent=Thaps261040;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1946410 1947073 . - 0 ID=Thaps261040;Parent=Thaps261040;rank=1 chr1 . exon 1946410 1947073 . - . ID=Thaps261040.1;Parent=Thaps261040;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1949405 1950076 . - . ID=Thaps261041;biotype=protein_coding;description=Arginine-trna-protein transferase [Source:UniProtKB/TrEMBL%3BAcc:B8BRF1];external_name=Thaps261041;logic_name=jgi_thaps3 chr1 ensembl transcript 1949405 1950076 . - . ID=Thaps261041;Parent=Thaps261041;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1949405 1949908 . - 0 ID=Thaps261041;Parent=Thaps261041;rank=2 chr1 . exon 1949405 1949908 . - . ID=Thaps261041.2;Parent=Thaps261041;constitutive=1;rank=2 chr1 . CDS 1949986 1950076 . - 0 ID=Thaps261041;Parent=Thaps261041;rank=1 chr1 . exon 1949986 1950076 . - . ID=Thaps261041.1;Parent=Thaps261041;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 1963499 1963506 . ? . description=dust chr1 ensembl protein_coding_gene 1955662 1957317 . - . ID=Thaps13156;biotype=protein_coding;description=Long-chain-fatty-acid--CoA ligase [Source:UniProtKB/TrEMBL%3BAcc:B8BRF3];external_name=ACS1;logic_name=jgi_thaps3 chr1 ensembl transcript 1955662 1957317 . - . ID=Thaps13156;Parent=Thaps13156;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1955662 1957317 . - 0 ID=Thaps13156;Parent=Thaps13156;rank=1 chr1 . exon 1955662 1957317 . - . ID=Thaps13156.1;Parent=Thaps13156;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1958116 1961507 . - . ID=Thaps204;biotype=protein_coding;description=Cation transport ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8BRF4];external_name=Thaps204;logic_name=jgi_thaps3 chr1 ensembl transcript 1958116 1961507 . - . ID=Thaps204;Parent=Thaps204;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1958116 1958771 . - 0 ID=Thaps204;Parent=Thaps204;rank=5 chr1 . exon 1958116 1958771 . - . ID=Thaps204.5;Parent=Thaps204;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 1958856 1959130 . - 0 ID=Thaps204;Parent=Thaps204;rank=4 chr1 . exon 1958856 1959130 . - . ID=Thaps204.4;Parent=Thaps204;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 1959212 1959950 . - 0 ID=Thaps204;Parent=Thaps204;rank=3 chr1 . exon 1959212 1959950 . - . ID=Thaps204.3;Parent=Thaps204;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1960044 1960487 . - 0 ID=Thaps204;Parent=Thaps204;rank=2 chr1 . exon 1960044 1960487 . - . ID=Thaps204.2;Parent=Thaps204;constitutive=1;rank=2 chr1 . CDS 1960574 1961507 . - 0 ID=Thaps204;Parent=Thaps204;rank=1 chr1 . exon 1960574 1961507 . - . ID=Thaps204.1;Parent=Thaps204;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1963285 1967106 . - . ID=Thaps20911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRF6];external_name=Thaps20911;logic_name=jgi_thaps3 chr1 ensembl transcript 1963285 1967106 . - . ID=Thaps20911;Parent=Thaps20911;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1963285 1967106 . - 0 ID=Thaps20911;Parent=Thaps20911;rank=1 chr1 . exon 1963285 1967106 . - . ID=Thaps20911.1;Parent=Thaps20911;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1962479 1962910 . + . ID=Thaps30915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRF5];external_name=Thaps30915;logic_name=jgi_thaps3 chr1 ensembl transcript 1962479 1962910 . + . ID=Thaps30915;Parent=Thaps30915;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1962479 1962910 . + 0 ID=Thaps30915;Parent=Thaps30915;rank=1 chr1 . exon 1962479 1962910 . + . ID=Thaps30915.1;Parent=Thaps30915;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1969278 1970123 . - . ID=Thaps1611;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRF8];external_name=Thaps1611;logic_name=jgi_thaps3 chr1 ensembl transcript 1969278 1970123 . - . ID=Thaps1611;Parent=Thaps1611;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1969278 1970123 . - 0 ID=Thaps1611;Parent=Thaps1611;rank=1 chr1 . exon 1969278 1970123 . - . ID=Thaps1611.1;Parent=Thaps1611;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1967560 1969029 . + . ID=Thaps20912;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRF7];external_name=Thaps20912;logic_name=jgi_thaps3 chr1 ensembl transcript 1967560 1969029 . + . ID=Thaps20912;Parent=Thaps20912;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1967560 1969029 . + 0 ID=Thaps20912;Parent=Thaps20912;rank=1 chr1 . exon 1967560 1969029 . + . ID=Thaps20912.1;Parent=Thaps20912;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1970455 1974833 . - . ID=Thaps261045;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRF9];external_name=Thaps261045;logic_name=jgi_thaps3 chr1 ensembl transcript 1970455 1974833 . - . ID=Thaps261045;Parent=Thaps261045;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1970455 1970571 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=10 chr1 . exon 1970455 1970571 . - . ID=Thaps261045.10;Parent=Thaps261045;constitutive=1;rank=10 chr1 . CDS 1970638 1970935 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=9 chr1 . exon 1970638 1970935 . - . ID=Thaps261045.9;Parent=Thaps261045;constitutive=1;ensembl_end_phase=1;rank=9 chr1 . CDS 1971017 1971288 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=8 chr1 . exon 1971017 1971288 . - . ID=Thaps261045.8;Parent=Thaps261045;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . CDS 1971394 1971624 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=7 chr1 . exon 1971394 1971624 . - . ID=Thaps261045.7;Parent=Thaps261045;constitutive=1;rank=7 chr1 . CDS 1971685 1972044 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=6 chr1 . exon 1971685 1972044 . - . ID=Thaps261045.6;Parent=Thaps261045;constitutive=1;rank=6 chr1 . CDS 1972130 1972377 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=5 chr1 . exon 1972130 1972377 . - . ID=Thaps261045.5;Parent=Thaps261045;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 1972464 1972748 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=4 chr1 . exon 1972464 1972748 . - . ID=Thaps261045.4;Parent=Thaps261045;constitutive=1;rank=4 chr1 . CDS 1972822 1973937 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=3 chr1 . exon 1972822 1973937 . - . ID=Thaps261045.3;Parent=Thaps261045;constitutive=1;rank=3 chr1 . CDS 1973984 1974103 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=2 chr1 . exon 1973984 1974103 . - . ID=Thaps261045.2;Parent=Thaps261045;constitutive=1;rank=2 chr1 . CDS 1974260 1974833 . - 0 ID=Thaps261045;Parent=Thaps261045;rank=1 chr1 . exon 1974260 1974833 . - . ID=Thaps261045.1;Parent=Thaps261045;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 1981733 1981740 . ? . description=dust chr1 ensembl protein_coding_gene 1984308 1985209 . + . ID=Thaps261047;biotype=protein_coding;description=Mitochondrial energy transfer protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRG0];external_name=Thaps261047;logic_name=jgi_thaps3 chr1 ensembl transcript 1984308 1985209 . + . ID=Thaps261047;Parent=Thaps261047;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1984308 1984433 . + 0 ID=Thaps261047;Parent=Thaps261047;rank=1 chr1 . exon 1984308 1984433 . + . ID=Thaps261047.1;Parent=Thaps261047;constitutive=1;rank=1 chr1 . CDS 1984467 1985139 . + 0 ID=Thaps261047;Parent=Thaps261047;rank=2 chr1 . exon 1984467 1985139 . + . ID=Thaps261047.2;Parent=Thaps261047;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1985184 1985209 . + 0 ID=Thaps261047;Parent=Thaps261047;rank=3 chr1 . exon 1985184 1985209 . + . ID=Thaps261047.3;Parent=Thaps261047;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . repeat_region 1989995 1990059 . - . description=Copia4LTR_TP chr1 ensembl protein_coding_gene 1990358 1992577 . - . ID=Thaps1615;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRG2];external_name=Thaps1615;logic_name=jgi_thaps3 chr1 ensembl transcript 1990358 1992577 . - . ID=Thaps1615;Parent=Thaps1615;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1990358 1992577 . - 0 ID=Thaps1615;Parent=Thaps1615;rank=1 chr1 . exon 1990358 1992577 . - . ID=Thaps1615.1;Parent=Thaps1615;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1985541 1989892 . - . ID=Thaps20915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRG1];external_name=Thaps20915;logic_name=jgi_thaps3 chr1 ensembl transcript 1985541 1989892 . - . ID=Thaps20915;Parent=Thaps20915;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1985541 1989250 . - 0 ID=Thaps20915;Parent=Thaps20915;rank=2 chr1 . exon 1985541 1989250 . - . ID=Thaps20915.2;Parent=Thaps20915;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1989274 1989892 . - 0 ID=Thaps20915;Parent=Thaps20915;rank=1 chr1 . exon 1989274 1989892 . - . ID=Thaps20915.1;Parent=Thaps20915;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 1993480 1995142 . - . ID=Thaps20916;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRG3];external_name=Thaps20916;logic_name=jgi_thaps3 chr1 ensembl transcript 1993480 1995142 . - . ID=Thaps20916;Parent=Thaps20916;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1993480 1993855 . - 0 ID=Thaps20916;Parent=Thaps20916;rank=3 chr1 . exon 1993480 1993855 . - . ID=Thaps20916.3;Parent=Thaps20916;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 1993920 1994550 . - 0 ID=Thaps20916;Parent=Thaps20916;rank=2 chr1 . exon 1993920 1994550 . - . ID=Thaps20916.2;Parent=Thaps20916;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 1994572 1995142 . - 0 ID=Thaps20916;Parent=Thaps20916;rank=1 chr1 . exon 1994572 1995142 . - . ID=Thaps20916.1;Parent=Thaps20916;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 1995791 1995824 . ? . description=trf chr1 . repeat_region 1999396 1999413 . ? . description=dust chr1 . repeat_region 2001748 2001778 . ? . description=trf chr1 . repeat_region 2001757 2001778 . ? . description=dust chr1 ensembl protein_coding_gene 2002124 2004416 . + . ID=Thaps1620;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRG7];external_name=Thaps1620;logic_name=jgi_thaps3 chr1 ensembl transcript 2002124 2004416 . + . ID=Thaps1620;Parent=Thaps1620;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2002124 2003677 . + 0 ID=Thaps1620;Parent=Thaps1620;rank=1 chr1 . exon 2002124 2003677 . + . ID=Thaps1620.1;Parent=Thaps1620;constitutive=1;rank=1 chr1 . CDS 2003751 2003868 . + 0 ID=Thaps1620;Parent=Thaps1620;rank=2 chr1 . exon 2003751 2003868 . + . ID=Thaps1620.2;Parent=Thaps1620;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2003938 2004416 . + 0 ID=Thaps1620;Parent=Thaps1620;rank=3 chr1 . exon 2003938 2004416 . + . ID=Thaps1620.3;Parent=Thaps1620;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1999509 2001794 . - . ID=Thaps20919;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRG6];external_name=Thaps20919;logic_name=jgi_thaps3 chr1 ensembl transcript 1999509 2001794 . - . ID=Thaps20919;Parent=Thaps20919;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1999509 2001794 . - 0 ID=Thaps20919;Parent=Thaps20919;rank=1 chr1 . exon 1999509 2001794 . - . ID=Thaps20919.1;Parent=Thaps20919;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 1995737 1997143 . + . ID=Thaps268078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRG4];external_name=Thaps268078;logic_name=jgi_thaps3 chr1 ensembl transcript 1995737 1997143 . + . ID=Thaps268078;Parent=Thaps268078;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1995737 1996179 . + 0 ID=Thaps268078;Parent=Thaps268078;rank=1 chr1 . exon 1995737 1996179 . + . ID=Thaps268078.1;Parent=Thaps268078;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 1996276 1996853 . + 0 ID=Thaps268078;Parent=Thaps268078;rank=2 chr1 . exon 1996276 1996853 . + . ID=Thaps268078.2;Parent=Thaps268078;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 1996938 1997143 . + 0 ID=Thaps268078;Parent=Thaps268078;rank=3 chr1 . exon 1996938 1997143 . + . ID=Thaps268078.3;Parent=Thaps268078;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 1998647 1999201 . - . ID=Thaps268080;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRG5];external_name=Thaps268080;logic_name=jgi_thaps3 chr1 ensembl transcript 1998647 1999201 . - . ID=Thaps268080;Parent=Thaps268080;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 1998647 1999201 . - 0 ID=Thaps268080;Parent=Thaps268080;rank=1 chr1 . exon 1998647 1999201 . - . ID=Thaps268080.1;Parent=Thaps268080;constitutive=1;rank=1 chr1 ensembl tRNA_gene 2014897 2014968 . - . ID=EPrTPOG00000000096;biotype=tRNA;description=tRNA-Asp for anticodon GUC [Source:TRNASCAN_SE%3BAcc:tRNA-Asp];external_name=tRNA-Asp;logic_name=ncrna_eg chr1 ensembl transcript 2014897 2014968 . - . ID=EPrTPOT00000000096;Parent=EPrTPOG00000000096;biotype=tRNA;logic_name=ncrna_eg chr1 ensembl tRNA_gene 2014982 2015054 . - . ID=EPrTPOG00000000119;biotype=tRNA;description=tRNA-Gln for anticodon CUG [Source:TRNASCAN_SE%3BAcc:tRNA-Gln];external_name=tRNA-Gln;logic_name=ncrna_eg chr1 ensembl transcript 2014982 2015054 . - . ID=EPrTPOT00000000119;Parent=EPrTPOG00000000119;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 2014897 2014968 . - . ID=EPrTPOE00000000096;Parent=EPrTPOT00000000096;constitutive=1;rank=1 chr1 . exon 2014982 2015054 . - . ID=EPrTPOE00000000119;Parent=EPrTPOT00000000119;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2005188 2006788 . - . ID=Thaps1621;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRG8];external_name=Thaps1621;logic_name=jgi_thaps3 chr1 ensembl transcript 2005188 2006788 . - . ID=Thaps1621;Parent=Thaps1621;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2005188 2005320 . - 0 ID=Thaps1621;Parent=Thaps1621;rank=3 chr1 . exon 2005188 2005320 . - . ID=Thaps1621.3;Parent=Thaps1621;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2005395 2005666 . - 0 ID=Thaps1621;Parent=Thaps1621;rank=2 chr1 . exon 2005395 2005666 . - . ID=Thaps1621.2;Parent=Thaps1621;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2005898 2006788 . - 0 ID=Thaps1621;Parent=Thaps1621;rank=1 chr1 . exon 2005898 2006788 . - . ID=Thaps1621.1;Parent=Thaps1621;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2006979 2008601 . - . ID=Thaps1622;biotype=protein_coding;description=DNA primase [Source:UniProtKB/TrEMBL%3BAcc:B8BRG9];external_name=Thaps1622;logic_name=jgi_thaps3 chr1 ensembl transcript 2006979 2008601 . - . ID=Thaps1622;Parent=Thaps1622;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2006979 2007725 . - 0 ID=Thaps1622;Parent=Thaps1622;rank=2 chr1 . exon 2006979 2007725 . - . ID=Thaps1622.2;Parent=Thaps1622;constitutive=1;rank=2 chr1 . CDS 2007834 2008601 . - 0 ID=Thaps1622;Parent=Thaps1622;rank=1 chr1 . exon 2007834 2008601 . - . ID=Thaps1622.1;Parent=Thaps1622;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2008998 2012101 . + . ID=Thaps20920;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRH0];external_name=Thaps20920;logic_name=jgi_thaps3 chr1 ensembl transcript 2008998 2012101 . + . ID=Thaps20920;Parent=Thaps20920;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2008998 2010587 . + 0 ID=Thaps20920;Parent=Thaps20920;rank=1 chr1 . exon 2008998 2010587 . + . ID=Thaps20920.1;Parent=Thaps20920;constitutive=1;rank=1 chr1 . CDS 2010669 2010833 . + 0 ID=Thaps20920;Parent=Thaps20920;rank=2 chr1 . exon 2010669 2010833 . + . ID=Thaps20920.2;Parent=Thaps20920;constitutive=1;rank=2 chr1 . CDS 2010920 2010978 . + 0 ID=Thaps20920;Parent=Thaps20920;rank=3 chr1 . exon 2010920 2010978 . + . ID=Thaps20920.3;Parent=Thaps20920;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2011054 2011163 . + 0 ID=Thaps20920;Parent=Thaps20920;rank=4 chr1 . exon 2011054 2011163 . + . ID=Thaps20920.4;Parent=Thaps20920;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2011234 2011349 . + 0 ID=Thaps20920;Parent=Thaps20920;rank=5 chr1 . exon 2011234 2011349 . + . ID=Thaps20920.5;Parent=Thaps20920;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 2011427 2012101 . + 0 ID=Thaps20920;Parent=Thaps20920;rank=6 chr1 . exon 2011427 2012101 . + . ID=Thaps20920.6;Parent=Thaps20920;constitutive=1;rank=6 chr1 ensembl protein_coding_gene 2012190 2014514 . - . ID=Thaps20921;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRH1];external_name=Thaps20921;logic_name=jgi_thaps3 chr1 ensembl transcript 2012190 2014514 . - . ID=Thaps20921;Parent=Thaps20921;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2012190 2012295 . - 0 ID=Thaps20921;Parent=Thaps20921;rank=4 chr1 . exon 2012190 2012295 . - . ID=Thaps20921.4;Parent=Thaps20921;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 2012401 2012513 . - 0 ID=Thaps20921;Parent=Thaps20921;rank=3 chr1 . exon 2012401 2012513 . - . ID=Thaps20921.3;Parent=Thaps20921;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2012590 2012659 . - 0 ID=Thaps20921;Parent=Thaps20921;rank=2 chr1 . exon 2012590 2012659 . - . ID=Thaps20921.2;Parent=Thaps20921;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2012734 2014514 . - 0 ID=Thaps20921;Parent=Thaps20921;rank=1 chr1 . exon 2012734 2014514 . - . ID=Thaps20921.1;Parent=Thaps20921;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 2024799 2024843 . ? . description=dust chr1 ensembl protein_coding_gene 2018649 2019365 . - . ID=Thaps1626;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRH3];external_name=Thaps1626;logic_name=jgi_thaps3 chr1 ensembl transcript 2018649 2019365 . - . ID=Thaps1626;Parent=Thaps1626;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2018649 2019365 . - 0 ID=Thaps1626;Parent=Thaps1626;rank=1 chr1 . exon 2018649 2019365 . - . ID=Thaps1626.1;Parent=Thaps1626;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2023396 2024753 . - . ID=Thaps1628;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRH5];external_name=Thaps1628;logic_name=jgi_thaps3 chr1 ensembl transcript 2023396 2024753 . - . ID=Thaps1628;Parent=Thaps1628;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2023396 2023587 . - 0 ID=Thaps1628;Parent=Thaps1628;rank=3 chr1 . exon 2023396 2023587 . - . ID=Thaps1628.3;Parent=Thaps1628;constitutive=1;rank=3 chr1 . CDS 2023663 2024143 . - 0 ID=Thaps1628;Parent=Thaps1628;rank=2 chr1 . exon 2023663 2024143 . - . ID=Thaps1628.2;Parent=Thaps1628;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2024227 2024753 . - 0 ID=Thaps1628;Parent=Thaps1628;rank=1 chr1 . exon 2024227 2024753 . - . ID=Thaps1628.1;Parent=Thaps1628;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2019690 2023361 . + . ID=Thaps20922;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRH4];external_name=Thaps20922;logic_name=jgi_thaps3 chr1 ensembl transcript 2019690 2023361 . + . ID=Thaps20922;Parent=Thaps20922;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2019690 2021611 . + 0 ID=Thaps20922;Parent=Thaps20922;rank=1 chr1 . exon 2019690 2021611 . + . ID=Thaps20922.1;Parent=Thaps20922;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2021688 2022435 . + 0 ID=Thaps20922;Parent=Thaps20922;rank=2 chr1 . exon 2021688 2022435 . + . ID=Thaps20922.2;Parent=Thaps20922;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2022515 2022898 . + 0 ID=Thaps20922;Parent=Thaps20922;rank=3 chr1 . exon 2022515 2022898 . + . ID=Thaps20922.3;Parent=Thaps20922;constitutive=1;rank=3 chr1 . CDS 2022978 2023361 . + 0 ID=Thaps20922;Parent=Thaps20922;rank=4 chr1 . exon 2022978 2023361 . + . ID=Thaps20922.4;Parent=Thaps20922;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2015494 2018398 . + . ID=Thaps30851;biotype=protein_coding;description=Member of the clp superfamily%2C regulatory gamma subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BRH2];external_name=CLPC2;logic_name=jgi_thaps3 chr1 ensembl transcript 2015494 2018398 . + . ID=Thaps30851;Parent=Thaps30851;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2015494 2015980 . + 0 ID=Thaps30851;Parent=Thaps30851;rank=1 chr1 . exon 2015494 2015980 . + . ID=Thaps30851.1;Parent=Thaps30851;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2016089 2016322 . + 0 ID=Thaps30851;Parent=Thaps30851;rank=2 chr1 . exon 2016089 2016322 . + . ID=Thaps30851.2;Parent=Thaps30851;constitutive=1;rank=2 chr1 . CDS 2016452 2016721 . + 0 ID=Thaps30851;Parent=Thaps30851;rank=3 chr1 . exon 2016452 2016721 . + . ID=Thaps30851.3;Parent=Thaps30851;constitutive=1;rank=3 chr1 . CDS 2016803 2017335 . + 0 ID=Thaps30851;Parent=Thaps30851;rank=4 chr1 . exon 2016803 2017335 . + . ID=Thaps30851.4;Parent=Thaps30851;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2017406 2017447 . + 0 ID=Thaps30851;Parent=Thaps30851;rank=5 chr1 . exon 2017406 2017447 . + . ID=Thaps30851.5;Parent=Thaps30851;constitutive=1;rank=5 chr1 . CDS 2017525 2017844 . + 0 ID=Thaps30851;Parent=Thaps30851;rank=6 chr1 . exon 2017525 2017844 . + . ID=Thaps30851.6;Parent=Thaps30851;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 2017939 2018398 . + 0 ID=Thaps30851;Parent=Thaps30851;rank=7 chr1 . exon 2017939 2018398 . + . ID=Thaps30851.7;Parent=Thaps30851;constitutive=1;ensembl_end_phase=1;rank=7 chr1 ensembl protein_coding_gene 2025502 2026908 . + . ID=Thaps1629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRH6];external_name=Thaps1629;logic_name=jgi_thaps3 chr1 ensembl transcript 2025502 2026908 . + . ID=Thaps1629;Parent=Thaps1629;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2025502 2026908 . + 0 ID=Thaps1629;Parent=Thaps1629;rank=1 chr1 . exon 2025502 2026908 . + . ID=Thaps1629.1;Parent=Thaps1629;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2030312 2030932 . + . ID=Thaps20923;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRH8];external_name=Thaps20923;logic_name=jgi_thaps3 chr1 ensembl transcript 2030312 2030932 . + . ID=Thaps20923;Parent=Thaps20923;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2030312 2030932 . + 0 ID=Thaps20923;Parent=Thaps20923;rank=1 chr1 . exon 2030312 2030932 . + . ID=Thaps20923.1;Parent=Thaps20923;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2032219 2035042 . + . ID=Thaps20924;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRH9];external_name=Thaps20924;logic_name=jgi_thaps3 chr1 ensembl transcript 2032219 2035042 . + . ID=Thaps20924;Parent=Thaps20924;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2032219 2032296 . + 0 ID=Thaps20924;Parent=Thaps20924;rank=1 chr1 . exon 2032219 2032296 . + . ID=Thaps20924.1;Parent=Thaps20924;constitutive=1;rank=1 chr1 . CDS 2032580 2035042 . + 0 ID=Thaps20924;Parent=Thaps20924;rank=2 chr1 . exon 2032580 2035042 . + . ID=Thaps20924.2;Parent=Thaps20924;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2028251 2029537 . - . ID=Thaps31629;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRH7];external_name=Thaps31629;logic_name=jgi_thaps3 chr1 ensembl transcript 2028251 2029537 . - . ID=Thaps31629;Parent=Thaps31629;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2028251 2028353 . - 0 ID=Thaps31629;Parent=Thaps31629;rank=3 chr1 . exon 2028251 2028353 . - . ID=Thaps31629.3;Parent=Thaps31629;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2029002 2029136 . - 0 ID=Thaps31629;Parent=Thaps31629;rank=2 chr1 . exon 2029002 2029136 . - . ID=Thaps31629.2;Parent=Thaps31629;constitutive=1;rank=2 chr1 . CDS 2029245 2029537 . - 0 ID=Thaps31629;Parent=Thaps31629;rank=1 chr1 . exon 2029245 2029537 . - . ID=Thaps31629.1;Parent=Thaps31629;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 2039584 2039591 . ? . description=dust chr1 . repeat_region 2040466 2040473 . ? . description=dust chr1 . repeat_region 2043078 2043089 . ? . description=dust chr1 ensembl protein_coding_gene 2038952 2039395 . - . ID=Thaps1634;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRI1];external_name=Thaps1634;logic_name=jgi_thaps3 chr1 ensembl transcript 2038952 2039395 . - . ID=Thaps1634;Parent=Thaps1634;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2038952 2039395 . - 0 ID=Thaps1634;Parent=Thaps1634;rank=1 chr1 . exon 2038952 2039395 . - . ID=Thaps1634.1;Parent=Thaps1634;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2043115 2043858 . - . ID=Thaps1636;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRI2];external_name=Thaps1636;logic_name=jgi_thaps3 chr1 ensembl transcript 2043115 2043858 . - . ID=Thaps1636;Parent=Thaps1636;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2043115 2043858 . - 0 ID=Thaps1636;Parent=Thaps1636;rank=1 chr1 . exon 2043115 2043858 . - . ID=Thaps1636.1;Parent=Thaps1636;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2035228 2038328 . - . ID=Thaps20925;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRI0];external_name=Thaps20925;logic_name=jgi_thaps3 chr1 ensembl transcript 2035228 2038328 . - . ID=Thaps20925;Parent=Thaps20925;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2035228 2036810 . - 0 ID=Thaps20925;Parent=Thaps20925;rank=4 chr1 . exon 2035228 2036810 . - . ID=Thaps20925.4;Parent=Thaps20925;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2036888 2037879 . - 0 ID=Thaps20925;Parent=Thaps20925;rank=3 chr1 . exon 2036888 2037879 . - . ID=Thaps20925.3;Parent=Thaps20925;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2037969 2038068 . - 0 ID=Thaps20925;Parent=Thaps20925;rank=2 chr1 . exon 2037969 2038068 . - . ID=Thaps20925.2;Parent=Thaps20925;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2038136 2038328 . - 0 ID=Thaps20925;Parent=Thaps20925;rank=1 chr1 . exon 2038136 2038328 . - . ID=Thaps20925.1;Parent=Thaps20925;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 2048677 2048716 . ? . description=trf chr1 ensembl protein_coding_gene 2052679 2054599 . + . ID=Thaps13134;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRI5];external_name=Thaps13134;logic_name=jgi_thaps3 chr1 ensembl transcript 2052679 2054599 . + . ID=Thaps13134;Parent=Thaps13134;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2052679 2052864 . + 0 ID=Thaps13134;Parent=Thaps13134;rank=1 chr1 . exon 2052679 2052864 . + . ID=Thaps13134.1;Parent=Thaps13134;constitutive=1;rank=1 chr1 . CDS 2052947 2053405 . + 0 ID=Thaps13134;Parent=Thaps13134;rank=2 chr1 . exon 2052947 2053405 . + . ID=Thaps13134.2;Parent=Thaps13134;constitutive=1;rank=2 chr1 . CDS 2053503 2053718 . + 0 ID=Thaps13134;Parent=Thaps13134;rank=3 chr1 . exon 2053503 2053718 . + . ID=Thaps13134.3;Parent=Thaps13134;constitutive=1;rank=3 chr1 . CDS 2053805 2054599 . + 0 ID=Thaps13134;Parent=Thaps13134;rank=4 chr1 . exon 2053805 2054599 . + . ID=Thaps13134.4;Parent=Thaps13134;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2045120 2046142 . + . ID=Thaps1637;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRI3];external_name=Thaps1637;logic_name=jgi_thaps3 chr1 ensembl transcript 2045120 2046142 . + . ID=Thaps1637;Parent=Thaps1637;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2045120 2046142 . + 0 ID=Thaps1637;Parent=Thaps1637;rank=1 chr1 . exon 2045120 2046142 . + . ID=Thaps1637.1;Parent=Thaps1637;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2047711 2049269 . + . ID=Thaps1638;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRI4];external_name=Thaps1638;logic_name=jgi_thaps3 chr1 ensembl transcript 2047711 2049269 . + . ID=Thaps1638;Parent=Thaps1638;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2047711 2048141 . + 0 ID=Thaps1638;Parent=Thaps1638;rank=1 chr1 . exon 2047711 2048141 . + . ID=Thaps1638.1;Parent=Thaps1638;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2048228 2048324 . + 0 ID=Thaps1638;Parent=Thaps1638;rank=2 chr1 . exon 2048228 2048324 . + . ID=Thaps1638.2;Parent=Thaps1638;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2048409 2049269 . + 0 ID=Thaps1638;Parent=Thaps1638;rank=3 chr1 . exon 2048409 2049269 . + . ID=Thaps1638.3;Parent=Thaps1638;constitutive=1;rank=3 chr1 . repeat_region 2055710 2055770 . ? . description=dust chr1 . repeat_region 2061262 2061278 . ? . description=dust chr1 ensembl protein_coding_gene 2057700 2059449 . + . ID=Thaps13393;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRI7];external_name=Thaps13393;logic_name=jgi_thaps3 chr1 ensembl transcript 2057700 2059449 . + . ID=Thaps13393;Parent=Thaps13393;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2057700 2059184 . + 0 ID=Thaps13393;Parent=Thaps13393;rank=1 chr1 . exon 2057700 2059184 . + . ID=Thaps13393.1;Parent=Thaps13393;constitutive=1;rank=1 chr1 . CDS 2059273 2059449 . + 0 ID=Thaps13393;Parent=Thaps13393;rank=2 chr1 . exon 2059273 2059449 . + . ID=Thaps13393.2;Parent=Thaps13393;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2064500 2065714 . - . ID=Thaps1643;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRI9];external_name=Thaps1643;logic_name=jgi_thaps3 chr1 ensembl transcript 2064500 2065714 . - . ID=Thaps1643;Parent=Thaps1643;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2064500 2065714 . - 0 ID=Thaps1643;Parent=Thaps1643;rank=1 chr1 . exon 2064500 2065714 . - . ID=Thaps1643.1;Parent=Thaps1643;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2055811 2057163 . + . ID=Thaps20927;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRI6];external_name=Thaps20927;logic_name=jgi_thaps3 chr1 ensembl transcript 2055811 2057163 . + . ID=Thaps20927;Parent=Thaps20927;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2055811 2057163 . + 0 ID=Thaps20927;Parent=Thaps20927;rank=1 chr1 . exon 2055811 2057163 . + . ID=Thaps20927.1;Parent=Thaps20927;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2059874 2063557 . + . ID=Thaps261056;biotype=protein_coding;description=Beta subunit of clathrin adaptor protein AP3 [Source:UniProtKB/TrEMBL%3BAcc:B8BRI8];external_name=APB3;logic_name=jgi_thaps3 chr1 ensembl transcript 2059874 2063557 . + . ID=Thaps261056;Parent=Thaps261056;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2059874 2060094 . + 0 ID=Thaps261056;Parent=Thaps261056;rank=1 chr1 . exon 2059874 2060094 . + . ID=Thaps261056.1;Parent=Thaps261056;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2060128 2060882 . + 0 ID=Thaps261056;Parent=Thaps261056;rank=2 chr1 . exon 2060128 2060882 . + . ID=Thaps261056.2;Parent=Thaps261056;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2061282 2061427 . + 0 ID=Thaps261056;Parent=Thaps261056;rank=3 chr1 . exon 2061282 2061427 . + . ID=Thaps261056.3;Parent=Thaps261056;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2061510 2061653 . + 0 ID=Thaps261056;Parent=Thaps261056;rank=4 chr1 . exon 2061510 2061653 . + . ID=Thaps261056.4;Parent=Thaps261056;constitutive=1;rank=4 chr1 . CDS 2061729 2061887 . + 0 ID=Thaps261056;Parent=Thaps261056;rank=5 chr1 . exon 2061729 2061887 . + . ID=Thaps261056.5;Parent=Thaps261056;constitutive=1;rank=5 chr1 . CDS 2061942 2062143 . + 0 ID=Thaps261056;Parent=Thaps261056;rank=6 chr1 . exon 2061942 2062143 . + . ID=Thaps261056.6;Parent=Thaps261056;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 2062222 2062280 . + 0 ID=Thaps261056;Parent=Thaps261056;rank=7 chr1 . exon 2062222 2062280 . + . ID=Thaps261056.7;Parent=Thaps261056;constitutive=1;ensembl_end_phase=2;rank=7 chr1 . CDS 2062314 2062645 . + 0 ID=Thaps261056;Parent=Thaps261056;rank=8 chr1 . exon 2062314 2062645 . + . ID=Thaps261056.8;Parent=Thaps261056;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . CDS 2062706 2063557 . + 0 ID=Thaps261056;Parent=Thaps261056;rank=9 chr1 . exon 2062706 2063557 . + . ID=Thaps261056.9;Parent=Thaps261056;constitutive=1;rank=9 chr1 ensembl protein_coding_gene 2067384 2068987 . + . ID=Thaps1644;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ0];external_name=Thaps1644;logic_name=jgi_thaps3 chr1 ensembl transcript 2067384 2068987 . + . ID=Thaps1644;Parent=Thaps1644;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2067384 2068392 . + 0 ID=Thaps1644;Parent=Thaps1644;rank=1 chr1 . exon 2067384 2068392 . + . ID=Thaps1644.1;Parent=Thaps1644;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2068475 2068744 . + 0 ID=Thaps1644;Parent=Thaps1644;rank=2 chr1 . exon 2068475 2068744 . + . ID=Thaps1644.2;Parent=Thaps1644;constitutive=1;rank=2 chr1 . CDS 2068821 2068987 . + 0 ID=Thaps1644;Parent=Thaps1644;rank=3 chr1 . exon 2068821 2068987 . + . ID=Thaps1644.3;Parent=Thaps1644;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2069663 2070484 . - . ID=Thaps1645;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ1];external_name=Thaps1645;logic_name=jgi_thaps3 chr1 ensembl transcript 2069663 2070484 . - . ID=Thaps1645;Parent=Thaps1645;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2069663 2070088 . - 0 ID=Thaps1645;Parent=Thaps1645;rank=2 chr1 . exon 2069663 2070088 . - . ID=Thaps1645.2;Parent=Thaps1645;constitutive=1;rank=2 chr1 . CDS 2070410 2070484 . - 0 ID=Thaps1645;Parent=Thaps1645;rank=1 chr1 . exon 2070410 2070484 . - . ID=Thaps1645.1;Parent=Thaps1645;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2070966 2072630 . + . ID=Thaps20930;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ2];external_name=Thaps20930;logic_name=jgi_thaps3 chr1 ensembl transcript 2070966 2072630 . + . ID=Thaps20930;Parent=Thaps20930;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2070966 2071015 . + 0 ID=Thaps20930;Parent=Thaps20930;rank=1 chr1 . exon 2070966 2071015 . + . ID=Thaps20930.1;Parent=Thaps20930;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2071072 2071596 . + 0 ID=Thaps20930;Parent=Thaps20930;rank=2 chr1 . exon 2071072 2071596 . + . ID=Thaps20930.2;Parent=Thaps20930;constitutive=1;rank=2 chr1 . CDS 2071689 2071728 . + 0 ID=Thaps20930;Parent=Thaps20930;rank=3 chr1 . exon 2071689 2071728 . + . ID=Thaps20930.3;Parent=Thaps20930;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2071850 2072164 . + 0 ID=Thaps20930;Parent=Thaps20930;rank=4 chr1 . exon 2071850 2072164 . + . ID=Thaps20930.4;Parent=Thaps20930;constitutive=1;rank=4 chr1 . CDS 2072244 2072630 . + 0 ID=Thaps20930;Parent=Thaps20930;rank=5 chr1 . exon 2072244 2072630 . + . ID=Thaps20930.5;Parent=Thaps20930;constitutive=1;rank=5 chr1 ensembl protein_coding_gene 2073146 2075208 . + . ID=Thaps20931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ3];external_name=Thaps20931;logic_name=jgi_thaps3 chr1 ensembl transcript 2073146 2075208 . + . ID=Thaps20931;Parent=Thaps20931;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2073146 2073970 . + 0 ID=Thaps20931;Parent=Thaps20931;rank=1 chr1 . exon 2073146 2073970 . + . ID=Thaps20931.1;Parent=Thaps20931;constitutive=1;rank=1 chr1 . CDS 2074054 2074554 . + 0 ID=Thaps20931;Parent=Thaps20931;rank=2 chr1 . exon 2074054 2074554 . + . ID=Thaps20931.2;Parent=Thaps20931;constitutive=1;rank=2 chr1 . CDS 2074639 2075208 . + 0 ID=Thaps20931;Parent=Thaps20931;rank=3 chr1 . exon 2074639 2075208 . + . ID=Thaps20931.3;Parent=Thaps20931;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 2077072 2079083 . + . ID=Thaps1649;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ5];external_name=Thaps1649;logic_name=jgi_thaps3 chr1 ensembl transcript 2077072 2079083 . + . ID=Thaps1649;Parent=Thaps1649;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2077072 2078156 . + 0 ID=Thaps1649;Parent=Thaps1649;rank=1 chr1 . exon 2077072 2078156 . + . ID=Thaps1649.1;Parent=Thaps1649;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2078230 2078354 . + 0 ID=Thaps1649;Parent=Thaps1649;rank=2 chr1 . exon 2078230 2078354 . + . ID=Thaps1649.2;Parent=Thaps1649;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2078425 2078523 . + 0 ID=Thaps1649;Parent=Thaps1649;rank=3 chr1 . exon 2078425 2078523 . + . ID=Thaps1649.3;Parent=Thaps1649;constitutive=1;rank=3 chr1 . CDS 2078599 2079083 . + 0 ID=Thaps1649;Parent=Thaps1649;rank=4 chr1 . exon 2078599 2079083 . + . ID=Thaps1649.4;Parent=Thaps1649;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 2079205 2081967 . - . ID=Thaps1650;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ6];external_name=Thaps1650;logic_name=jgi_thaps3 chr1 ensembl transcript 2079205 2081967 . - . ID=Thaps1650;Parent=Thaps1650;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2079205 2080356 . - 0 ID=Thaps1650;Parent=Thaps1650;rank=4 chr1 . exon 2079205 2080356 . - . ID=Thaps1650.4;Parent=Thaps1650;constitutive=1;rank=4 chr1 . CDS 2080426 2081485 . - 0 ID=Thaps1650;Parent=Thaps1650;rank=3 chr1 . exon 2080426 2081485 . - . ID=Thaps1650.3;Parent=Thaps1650;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2081569 2081686 . - 0 ID=Thaps1650;Parent=Thaps1650;rank=2 chr1 . exon 2081569 2081686 . - . ID=Thaps1650.2;Parent=Thaps1650;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2081724 2081967 . - 0 ID=Thaps1650;Parent=Thaps1650;rank=1 chr1 . exon 2081724 2081967 . - . ID=Thaps1650.1;Parent=Thaps1650;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2075357 2076892 . - . ID=Thaps20932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ4];external_name=Thaps20932;logic_name=jgi_thaps3 chr1 ensembl transcript 2075357 2076892 . - . ID=Thaps20932;Parent=Thaps20932;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2075357 2076892 . - 0 ID=Thaps20932;Parent=Thaps20932;rank=1 chr1 . exon 2075357 2076892 . - . ID=Thaps20932.1;Parent=Thaps20932;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2083328 2084806 . - . ID=Thaps20933;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ8];external_name=Thaps20933;logic_name=jgi_thaps3 chr1 ensembl transcript 2083328 2084806 . - . ID=Thaps20933;Parent=Thaps20933;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2083328 2084806 . - 0 ID=Thaps20933;Parent=Thaps20933;rank=1 chr1 . exon 2083328 2084806 . - . ID=Thaps20933.1;Parent=Thaps20933;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2082455 2083062 . + . ID=Thaps31598;biotype=protein_coding;description=Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ7];external_name=Thaps31598;logic_name=jgi_thaps3 chr1 ensembl transcript 2082455 2083062 . + . ID=Thaps31598;Parent=Thaps31598;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2082455 2082522 . + 0 ID=Thaps31598;Parent=Thaps31598;rank=1 chr1 . exon 2082455 2082522 . + . ID=Thaps31598.1;Parent=Thaps31598;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2082636 2083062 . + 0 ID=Thaps31598;Parent=Thaps31598;rank=2 chr1 . exon 2082636 2083062 . + . ID=Thaps31598.2;Parent=Thaps31598;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 2085067 2085925 . + . ID=Thaps1653;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRJ9];external_name=Thaps1653;logic_name=jgi_thaps3 chr1 ensembl transcript 2085067 2085925 . + . ID=Thaps1653;Parent=Thaps1653;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2085067 2085222 . + 0 ID=Thaps1653;Parent=Thaps1653;rank=1 chr1 . exon 2085067 2085222 . + . ID=Thaps1653.1;Parent=Thaps1653;constitutive=1;rank=1 chr1 . CDS 2085376 2085598 . + 0 ID=Thaps1653;Parent=Thaps1653;rank=2 chr1 . exon 2085376 2085598 . + . ID=Thaps1653.2;Parent=Thaps1653;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2085798 2085925 . + 0 ID=Thaps1653;Parent=Thaps1653;rank=3 chr1 . exon 2085798 2085925 . + . ID=Thaps1653.3;Parent=Thaps1653;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2086627 2087841 . - . ID=Thaps17110;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRK0];external_name=Thaps17110;logic_name=jgi_thaps3 chr1 ensembl transcript 2086627 2087841 . - . ID=Thaps17110;Parent=Thaps17110;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2086627 2086740 . - 0 ID=Thaps17110;Parent=Thaps17110;rank=5 chr1 . exon 2086627 2086740 . - . ID=Thaps17110.5;Parent=Thaps17110;constitutive=1;rank=5 chr1 . CDS 2086858 2087091 . - 0 ID=Thaps17110;Parent=Thaps17110;rank=4 chr1 . exon 2086858 2087091 . - . ID=Thaps17110.4;Parent=Thaps17110;constitutive=1;rank=4 chr1 . CDS 2087155 2087241 . - 0 ID=Thaps17110;Parent=Thaps17110;rank=3 chr1 . exon 2087155 2087241 . - . ID=Thaps17110.3;Parent=Thaps17110;constitutive=1;rank=3 chr1 . CDS 2087323 2087486 . - 0 ID=Thaps17110;Parent=Thaps17110;rank=2 chr1 . exon 2087323 2087486 . - . ID=Thaps17110.2;Parent=Thaps17110;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2087580 2087841 . - 0 ID=Thaps17110;Parent=Thaps17110;rank=1 chr1 . exon 2087580 2087841 . - . ID=Thaps17110.1;Parent=Thaps17110;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl gene 2091667 2092251 . - . ID=Thaps261058;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 2091667 2092251 . - . ID=Thaps261058;Parent=Thaps261058;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 2091667 2091729 . - . ID=Thaps261058.3;Parent=Thaps261058;constitutive=1;rank=3 chr1 . exon 2091803 2091857 . - . ID=Thaps261058.2;Parent=Thaps261058;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 2091921 2092251 . - . ID=Thaps261058.1;Parent=Thaps261058;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2093652 2094981 . - . ID=Thaps261059;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRK2];external_name=Thaps261059;logic_name=jgi_thaps3 chr1 ensembl transcript 2093652 2094981 . - . ID=Thaps261059;Parent=Thaps261059;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2093652 2093941 . - 0 ID=Thaps261059;Parent=Thaps261059;rank=4 chr1 . exon 2093652 2093941 . - . ID=Thaps261059.4;Parent=Thaps261059;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2094018 2094086 . - 0 ID=Thaps261059;Parent=Thaps261059;rank=3 chr1 . exon 2094018 2094086 . - . ID=Thaps261059.3;Parent=Thaps261059;constitutive=1;rank=3 chr1 . CDS 2094185 2094848 . - 0 ID=Thaps261059;Parent=Thaps261059;rank=2 chr1 . exon 2094185 2094848 . - . ID=Thaps261059.2;Parent=Thaps261059;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2094876 2094981 . - 0 ID=Thaps261059;Parent=Thaps261059;rank=1 chr1 . exon 2094876 2094981 . - . ID=Thaps261059.1;Parent=Thaps261059;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2088320 2090233 . + . ID=Thaps268084;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRK1];external_name=Thaps268084;logic_name=jgi_thaps3 chr1 ensembl transcript 2088320 2090233 . + . ID=Thaps268084;Parent=Thaps268084;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2088320 2088424 . + 0 ID=Thaps268084;Parent=Thaps268084;rank=1 chr1 . exon 2088320 2088424 . + . ID=Thaps268084.1;Parent=Thaps268084;constitutive=1;rank=1 chr1 . CDS 2088518 2088676 . + 0 ID=Thaps268084;Parent=Thaps268084;rank=2 chr1 . exon 2088518 2088676 . + . ID=Thaps268084.2;Parent=Thaps268084;constitutive=1;rank=2 chr1 . CDS 2088716 2089529 . + 0 ID=Thaps268084;Parent=Thaps268084;rank=3 chr1 . exon 2088716 2089529 . + . ID=Thaps268084.3;Parent=Thaps268084;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2089695 2089819 . + 0 ID=Thaps268084;Parent=Thaps268084;rank=4 chr1 . exon 2089695 2089819 . + . ID=Thaps268084.4;Parent=Thaps268084;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2089844 2090233 . + 0 ID=Thaps268084;Parent=Thaps268084;rank=5 chr1 . exon 2089844 2090233 . + . ID=Thaps268084.5;Parent=Thaps268084;constitutive=1;rank=5 chr1 . repeat_region 2097046 2097236 . - . description=scaffold_12_102_1_244538_244924 chr1 . repeat_region 2097418 2097455 . - . description=scaffold_12_102_1_244538_244924 chr1 ensembl protein_coding_gene 2099192 2102096 . - . ID=Thaps20935;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRK4];external_name=Thaps20935;logic_name=jgi_thaps3 chr1 ensembl transcript 2099192 2102096 . - . ID=Thaps20935;Parent=Thaps20935;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2099192 2101945 . - 0 ID=Thaps20935;Parent=Thaps20935;rank=2 chr1 . exon 2099192 2101945 . - . ID=Thaps20935.2;Parent=Thaps20935;constitutive=1;rank=2 chr1 . CDS 2102082 2102096 . - 0 ID=Thaps20935;Parent=Thaps20935;rank=1 chr1 . exon 2102082 2102096 . - . ID=Thaps20935.1;Parent=Thaps20935;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2104713 2106589 . - . ID=Thaps30950;biotype=protein_coding;description=Mannosyl-oligosaccharide alpha-mannosidase [Source:UniProtKB/TrEMBL%3BAcc:B8BRK5];external_name=Thaps30950;logic_name=jgi_thaps3 chr1 ensembl transcript 2104713 2106589 . - . ID=Thaps30950;Parent=Thaps30950;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2104713 2104875 . - 0 ID=Thaps30950;Parent=Thaps30950;rank=5 chr1 . exon 2104713 2104875 . - . ID=Thaps30950.5;Parent=Thaps30950;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 2104948 2105055 . - 0 ID=Thaps30950;Parent=Thaps30950;rank=4 chr1 . CDS 2105187 2105932 . - 0 ID=Thaps30950;Parent=Thaps30950;rank=3 chr1 . CDS 2106188 2106301 . - 0 ID=Thaps30950;Parent=Thaps30950;rank=2 chr1 . CDS 2106371 2106589 . - 0 ID=Thaps30950;Parent=Thaps30950;rank=1 chr1 ensembl protein_coding_gene 2098070 2099058 . + . ID=Thaps30981;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRK3];external_name=Thaps30981;logic_name=jgi_thaps3 chr1 ensembl transcript 2098070 2099058 . + . ID=Thaps30981;Parent=Thaps30981;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2098070 2098109 . + 0 ID=Thaps30981;Parent=Thaps30981;rank=1 chr1 . exon 2098070 2098109 . + . ID=Thaps30981.1;Parent=Thaps30981;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2098219 2098795 . + 0 ID=Thaps30981;Parent=Thaps30981;rank=2 chr1 . exon 2098219 2098795 . + . ID=Thaps30981.2;Parent=Thaps30981;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2098893 2099058 . + 0 ID=Thaps30981;Parent=Thaps30981;rank=3 chr1 . exon 2098893 2099058 . + . ID=Thaps30981.3;Parent=Thaps30981;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . repeat_region 2108043 2108184 . + . description=TE1A_TP chr1 . repeat_region 2109318 2109362 . ? . description=trf chr1 . repeat_region 2109318 2109362 . ? . description=dust chr1 . repeat_region 2110894 2110912 . ? . description=dust chr1 ensembl protein_coding_gene 2108515 2109616 . - . ID=Thaps25921;biotype=protein_coding;description=Silaffin protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRK6];external_name=TPSIL2;logic_name=jgi_thaps3 chr1 ensembl transcript 2108515 2109616 . - . ID=Thaps25921;Parent=Thaps25921;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2108515 2108554 . - 0 ID=Thaps25921;Parent=Thaps25921;rank=4 chr1 . exon 2108515 2108554 . - . ID=Thaps25921.4;Parent=Thaps25921;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 2108633 2108989 . - 0 ID=Thaps25921;Parent=Thaps25921;rank=3 chr1 . exon 2108633 2108989 . - . ID=Thaps25921.3;Parent=Thaps25921;constitutive=1;rank=3 chr1 . CDS 2109159 2109314 . - 0 ID=Thaps25921;Parent=Thaps25921;rank=2 chr1 . exon 2109159 2109314 . - . ID=Thaps25921.2;Parent=Thaps25921;constitutive=1;rank=2 chr1 . CDS 2109474 2109616 . - 0 ID=Thaps25921;Parent=Thaps25921;rank=1 chr1 . exon 2109474 2109616 . - . ID=Thaps25921.1;Parent=Thaps25921;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2110995 2112187 . + . ID=Thaps261063;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRK7];external_name=Thaps261063;logic_name=jgi_thaps3 chr1 ensembl transcript 2110995 2112187 . + . ID=Thaps261063;Parent=Thaps261063;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2110995 2111170 . + 0 ID=Thaps261063;Parent=Thaps261063;rank=1 chr1 . exon 2110995 2111170 . + . ID=Thaps261063.1;Parent=Thaps261063;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2111276 2111340 . + 0 ID=Thaps261063;Parent=Thaps261063;rank=2 chr1 . exon 2111276 2111340 . + . ID=Thaps261063.2;Parent=Thaps261063;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2111440 2111597 . + 0 ID=Thaps261063;Parent=Thaps261063;rank=3 chr1 . exon 2111440 2111597 . + . ID=Thaps261063.3;Parent=Thaps261063;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2111688 2111776 . + 0 ID=Thaps261063;Parent=Thaps261063;rank=4 chr1 . exon 2111688 2111776 . + . ID=Thaps261063.4;Parent=Thaps261063;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2111822 2111897 . + 0 ID=Thaps261063;Parent=Thaps261063;rank=5 chr1 . exon 2111822 2111897 . + . ID=Thaps261063.5;Parent=Thaps261063;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 2111967 2112187 . + 0 ID=Thaps261063;Parent=Thaps261063;rank=6 chr1 . exon 2111967 2112187 . + . ID=Thaps261063.6;Parent=Thaps261063;constitutive=1;ensembl_end_phase=2;rank=6 chr1 ensembl protein_coding_gene 2112483 2112782 . + . ID=Thaps261064;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRK8];external_name=Thaps261064;logic_name=jgi_thaps3 chr1 ensembl transcript 2112483 2112782 . + . ID=Thaps261064;Parent=Thaps261064;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2112483 2112603 . + 0 ID=Thaps261064;Parent=Thaps261064;rank=1 chr1 . exon 2112483 2112603 . + . ID=Thaps261064.1;Parent=Thaps261064;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2112619 2112782 . + 0 ID=Thaps261064;Parent=Thaps261064;rank=2 chr1 . exon 2112619 2112782 . + . ID=Thaps261064.2;Parent=Thaps261064;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2112804 2113366 . + . ID=Thaps261065;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRK9];external_name=Thaps261065;logic_name=jgi_thaps3 chr1 ensembl transcript 2112804 2113366 . + . ID=Thaps261065;Parent=Thaps261065;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2112804 2113246 . + 0 ID=Thaps261065;Parent=Thaps261065;rank=1 chr1 . exon 2112804 2113246 . + . ID=Thaps261065.1;Parent=Thaps261065;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2113319 2113366 . + 0 ID=Thaps261065;Parent=Thaps261065;rank=2 chr1 . exon 2113319 2113366 . + . ID=Thaps261065.2;Parent=Thaps261065;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2114157 2115396 . - . ID=Thaps26759;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRL0];external_name=Thaps26759;logic_name=jgi_thaps3 chr1 ensembl transcript 2114157 2115396 . - . ID=Thaps26759;Parent=Thaps26759;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2114157 2115076 . - 0 ID=Thaps26759;Parent=Thaps26759;rank=2 chr1 . exon 2114157 2115076 . - . ID=Thaps26759.2;Parent=Thaps26759;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2115240 2115396 . - 0 ID=Thaps26759;Parent=Thaps26759;rank=1 chr1 . exon 2104948 2105055 . - . ID=Thaps30950.4;Parent=Thaps30950;constitutive=1;rank=4 chr1 . exon 2105187 2105932 . - . ID=Thaps30950.3;Parent=Thaps30950;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 2106188 2106301 . - . ID=Thaps30950.2;Parent=Thaps30950;constitutive=1;rank=2 chr1 . exon 2106371 2106589 . - . ID=Thaps30950.1;Parent=Thaps30950;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2116018 2116764 . + . ID=Thaps1665;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRL1];external_name=Thaps1665;logic_name=jgi_thaps3 chr1 ensembl transcript 2116018 2116764 . + . ID=Thaps1665;Parent=Thaps1665;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2116018 2116764 . + 0 ID=Thaps1665;Parent=Thaps1665;rank=1 chr1 . exon 2116018 2116764 . + . ID=Thaps1665.1;Parent=Thaps1665;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2117116 2118207 . + . ID=Thaps1666;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRL2];external_name=Thaps1666;logic_name=jgi_thaps3 chr1 ensembl transcript 2117116 2118207 . + . ID=Thaps1666;Parent=Thaps1666;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2117116 2118207 . + 0 ID=Thaps1666;Parent=Thaps1666;rank=1 chr1 . exon 2117116 2118207 . + . ID=Thaps1666.1;Parent=Thaps1666;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2122089 2123711 . - . ID=Thaps1668;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRL4];external_name=Thaps1668;logic_name=jgi_thaps3 chr1 ensembl transcript 2122089 2123711 . - . ID=Thaps1668;Parent=Thaps1668;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2122089 2123711 . - 0 ID=Thaps1668;Parent=Thaps1668;rank=1 chr1 . exon 2122089 2123711 . - . ID=Thaps1668.1;Parent=Thaps1668;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2124729 2126793 . + . ID=Thaps261067;biotype=protein_coding;description=Alkaline phosphatase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRL5];external_name=Thaps261067;logic_name=jgi_thaps3 chr1 ensembl transcript 2124729 2126793 . + . ID=Thaps261067;Parent=Thaps261067;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2124729 2124818 . + 0 ID=Thaps261067;Parent=Thaps261067;rank=1 chr1 . exon 2124729 2124818 . + . ID=Thaps261067.1;Parent=Thaps261067;constitutive=1;rank=1 chr1 . CDS 2125041 2125317 . + 0 ID=Thaps261067;Parent=Thaps261067;rank=2 chr1 . CDS 2125414 2125965 . + 0 ID=Thaps261067;Parent=Thaps261067;rank=3 chr1 . CDS 2126023 2126281 . + 0 ID=Thaps261067;Parent=Thaps261067;rank=4 chr1 . CDS 2126368 2126536 . + 0 ID=Thaps261067;Parent=Thaps261067;rank=5 chr1 . CDS 2126639 2126793 . + 0 ID=Thaps261067;Parent=Thaps261067;rank=6 chr1 . exon 2115240 2115396 . - . ID=Thaps26759.1;Parent=Thaps26759;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2119561 2120646 . + . ID=Thaps31132;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRL3];external_name=Thaps31132;logic_name=jgi_thaps3 chr1 ensembl transcript 2119561 2120646 . + . ID=Thaps31132;Parent=Thaps31132;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2119561 2120367 . + 0 ID=Thaps31132;Parent=Thaps31132;rank=1 chr1 . exon 2119561 2120367 . + . ID=Thaps31132.1;Parent=Thaps31132;constitutive=1;rank=1 chr1 . CDS 2120455 2120646 . + 0 ID=Thaps31132;Parent=Thaps31132;rank=2 chr1 . exon 2120455 2120646 . + . ID=Thaps31132.2;Parent=Thaps31132;constitutive=1;rank=2 chr1 . repeat_region 2127642 2127664 . ? . description=dust chr1 . repeat_region 2130431 2130438 . ? . description=dust chr1 ensembl protein_coding_gene 2130338 2131699 . + . ID=Thaps1672;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRL7];external_name=Thaps1672;logic_name=jgi_thaps3 chr1 ensembl transcript 2130338 2131699 . + . ID=Thaps1672;Parent=Thaps1672;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2130338 2131699 . + 0 ID=Thaps1672;Parent=Thaps1672;rank=1 chr1 . exon 2130338 2131699 . + . ID=Thaps1672.1;Parent=Thaps1672;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2133514 2135889 . + . ID=Thaps1674;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRL9];external_name=Thaps1674;logic_name=jgi_thaps3 chr1 ensembl transcript 2133514 2135889 . + . ID=Thaps1674;Parent=Thaps1674;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2133514 2135889 . + 0 ID=Thaps1674;Parent=Thaps1674;rank=1 chr1 . exon 2133514 2135889 . + . ID=Thaps1674.1;Parent=Thaps1674;constitutive=1;rank=1 chr1 . exon 2125041 2125317 . + . ID=Thaps261067.2;Parent=Thaps261067;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 2125414 2125965 . + . ID=Thaps261067.3;Parent=Thaps261067;constitutive=1;rank=3 chr1 . exon 2126023 2126281 . + . ID=Thaps261067.4;Parent=Thaps261067;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . exon 2126368 2126536 . + . ID=Thaps261067.5;Parent=Thaps261067;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . exon 2126639 2126793 . + . ID=Thaps261067.6;Parent=Thaps261067;constitutive=1;ensembl_end_phase=2;rank=6 chr1 ensembl protein_coding_gene 2129196 2130297 . - . ID=Thaps268092;biotype=protein_coding;description=Ornithine cyclodeaminase [Source:UniProtKB/TrEMBL%3BAcc:B8BRL6];external_name=Thaps268092;logic_name=jgi_thaps3 chr1 ensembl transcript 2129196 2130297 . - . ID=Thaps268092;Parent=Thaps268092;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2129196 2130097 . - 0 ID=Thaps268092;Parent=Thaps268092;rank=2 chr1 . exon 2129196 2130097 . - . ID=Thaps268092.2;Parent=Thaps268092;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2130159 2130297 . - 0 ID=Thaps268092;Parent=Thaps268092;rank=1 chr1 . exon 2130159 2130297 . - . ID=Thaps268092.1;Parent=Thaps268092;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2132021 2132878 . - . ID=Thaps30895;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRL8];external_name=Thaps30895;logic_name=jgi_thaps3 chr1 ensembl transcript 2132021 2132878 . - . ID=Thaps30895;Parent=Thaps30895;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2132021 2132583 . - 0 ID=Thaps30895;Parent=Thaps30895;rank=2 chr1 . exon 2132021 2132583 . - . ID=Thaps30895.2;Parent=Thaps30895;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2132713 2132878 . - 0 ID=Thaps30895;Parent=Thaps30895;rank=1 chr1 . exon 2132713 2132878 . - . ID=Thaps30895.1;Parent=Thaps30895;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2139352 2140917 . - . ID=Thaps1676;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRM1];external_name=Thaps1676;logic_name=jgi_thaps3 chr1 ensembl transcript 2139352 2140917 . - . ID=Thaps1676;Parent=Thaps1676;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2139352 2140917 . - 0 ID=Thaps1676;Parent=Thaps1676;rank=1 chr1 . exon 2139352 2140917 . - . ID=Thaps1676.1;Parent=Thaps1676;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2136103 2139295 . + . ID=Thaps20944;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRM0];external_name=Thaps20944;logic_name=jgi_thaps3 chr1 ensembl transcript 2136103 2139295 . + . ID=Thaps20944;Parent=Thaps20944;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2136103 2138180 . + 0 ID=Thaps20944;Parent=Thaps20944;rank=1 chr1 . exon 2136103 2138180 . + . ID=Thaps20944.1;Parent=Thaps20944;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2138265 2138329 . + 0 ID=Thaps20944;Parent=Thaps20944;rank=2 chr1 . exon 2138265 2138329 . + . ID=Thaps20944.2;Parent=Thaps20944;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2138397 2139295 . + 0 ID=Thaps20944;Parent=Thaps20944;rank=3 chr1 . exon 2138397 2139295 . + . ID=Thaps20944.3;Parent=Thaps20944;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2141192 2142094 . + . ID=Thaps20945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRM2];external_name=Thaps20945;logic_name=jgi_thaps3 chr1 ensembl transcript 2141192 2142094 . + . ID=Thaps20945;Parent=Thaps20945;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2141192 2141287 . + 0 ID=Thaps20945;Parent=Thaps20945;rank=1 chr1 . exon 2141192 2141287 . + . ID=Thaps20945.1;Parent=Thaps20945;constitutive=1;rank=1 chr1 . CDS 2141618 2142094 . + 0 ID=Thaps20945;Parent=Thaps20945;rank=2 chr1 . exon 2141618 2142094 . + . ID=Thaps20945.2;Parent=Thaps20945;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2143464 2144228 . - . ID=Thaps20946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRM4];external_name=Thaps20946;logic_name=jgi_thaps3 chr1 ensembl transcript 2143464 2144228 . - . ID=Thaps20946;Parent=Thaps20946;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2143464 2144228 . - 0 ID=Thaps20946;Parent=Thaps20946;rank=1 chr1 . exon 2143464 2144228 . - . ID=Thaps20946.1;Parent=Thaps20946;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2142812 2143234 . + . ID=Thaps31121;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRM3];external_name=Thaps31121;logic_name=jgi_thaps3 chr1 ensembl transcript 2142812 2143234 . + . ID=Thaps31121;Parent=Thaps31121;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2142812 2143234 . + 0 ID=Thaps31121;Parent=Thaps31121;rank=1 chr1 . exon 2142812 2143234 . + . ID=Thaps31121.1;Parent=Thaps31121;constitutive=1;rank=1 chr1 . repeat_region 2154714 2154734 . ? . description=trf chr1 . repeat_region 2154808 2154825 . ? . description=dust chr1 ensembl protein_coding_gene 2145043 2146530 . + . ID=Thaps1680;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRM5];external_name=Thaps1680;logic_name=jgi_thaps3 chr1 ensembl transcript 2145043 2146530 . + . ID=Thaps1680;Parent=Thaps1680;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2145043 2146530 . + 0 ID=Thaps1680;Parent=Thaps1680;rank=1 chr1 . exon 2145043 2146530 . + . ID=Thaps1680.1;Parent=Thaps1680;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2147288 2150149 . - . ID=Thaps1681;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRM6];external_name=Thaps1681;logic_name=jgi_thaps3 chr1 ensembl transcript 2147288 2150149 . - . ID=Thaps1681;Parent=Thaps1681;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2147288 2150149 . - 0 ID=Thaps1681;Parent=Thaps1681;rank=1 chr1 . exon 2147288 2150149 . - . ID=Thaps1681.1;Parent=Thaps1681;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2152120 2154219 . - . ID=Thaps31661;biotype=protein_coding;description=Glycosyl hydrolase [Source:UniProtKB/TrEMBL%3BAcc:B8BRM7];external_name=Thaps31661;logic_name=jgi_thaps3 chr1 ensembl transcript 2152120 2154219 . - . ID=Thaps31661;Parent=Thaps31661;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2152120 2152824 . - 0 ID=Thaps31661;Parent=Thaps31661;rank=4 chr1 . exon 2152120 2152824 . - . ID=Thaps31661.4;Parent=Thaps31661;constitutive=1;rank=4 chr1 . CDS 2152902 2153291 . - 0 ID=Thaps31661;Parent=Thaps31661;rank=3 chr1 . exon 2152902 2153291 . - . ID=Thaps31661.3;Parent=Thaps31661;constitutive=1;rank=3 chr1 . CDS 2153535 2153635 . - 0 ID=Thaps31661;Parent=Thaps31661;rank=2 chr1 . exon 2153535 2153635 . - . ID=Thaps31661.2;Parent=Thaps31661;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2153712 2154219 . - 0 ID=Thaps31661;Parent=Thaps31661;rank=1 chr1 . exon 2153712 2154219 . - . ID=Thaps31661.1;Parent=Thaps31661;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2160692 2161334 . + . ID=Thaps1684;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRM9];external_name=Thaps1684;logic_name=jgi_thaps3 chr1 ensembl transcript 2160692 2161334 . + . ID=Thaps1684;Parent=Thaps1684;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2160692 2160971 . + 0 ID=Thaps1684;Parent=Thaps1684;rank=1 chr1 . exon 2160692 2160971 . + . ID=Thaps1684.1;Parent=Thaps1684;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2161060 2161334 . + 0 ID=Thaps1684;Parent=Thaps1684;rank=2 chr1 . exon 2161060 2161334 . + . ID=Thaps1684.2;Parent=Thaps1684;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2161729 2162619 . + . ID=Thaps1685;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN0];external_name=Thaps1685;logic_name=jgi_thaps3 chr1 ensembl transcript 2161729 2162619 . + . ID=Thaps1685;Parent=Thaps1685;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2161729 2162619 . + 0 ID=Thaps1685;Parent=Thaps1685;rank=1 chr1 . exon 2161729 2162619 . + . ID=Thaps1685.1;Parent=Thaps1685;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2156958 2158730 . + . ID=Thaps261072;biotype=protein_coding;description=Peroxisome biosynthesis protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRM8];external_name=Thaps261072;logic_name=jgi_thaps3 chr1 ensembl transcript 2156958 2158730 . + . ID=Thaps261072;Parent=Thaps261072;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2156958 2157287 . + 0 ID=Thaps261072;Parent=Thaps261072;rank=1 chr1 . exon 2156958 2157287 . + . ID=Thaps261072.1;Parent=Thaps261072;constitutive=1;rank=1 chr1 . CDS 2157342 2158730 . + 0 ID=Thaps261072;Parent=Thaps261072;rank=2 chr1 . exon 2157342 2158730 . + . ID=Thaps261072.2;Parent=Thaps261072;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2163392 2164720 . + . ID=Thaps26769;biotype=protein_coding;external_name=Thaps26769;logic_name=jgi_thaps3 chr1 ensembl transcript 2163392 2164720 . + . ID=Thaps26769;Parent=Thaps26769;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2163392 2164720 . + 0 ID=Thaps26769;Parent=Thaps26769;rank=1 chr1 . exon 2163392 2164720 . + . ID=Thaps26769.1;Parent=Thaps26769;constitutive=1;rank=1 chr1 . repeat_region 2165667 2165675 . ? . description=dust chr1 . repeat_region 2166264 2166336 . ? . description=trf chr1 . repeat_region 2172944 2172963 . ? . description=trf chr1 ensembl protein_coding_gene 2167422 2168681 . - . ID=Thaps1687;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN1];external_name=Thaps1687;logic_name=jgi_thaps3 chr1 ensembl transcript 2167422 2168681 . - . ID=Thaps1687;Parent=Thaps1687;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2167422 2168681 . - 0 ID=Thaps1687;Parent=Thaps1687;rank=1 chr1 . exon 2167422 2168681 . - . ID=Thaps1687.1;Parent=Thaps1687;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2169212 2171755 . + . ID=Thaps20950;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN2];external_name=Thaps20950;logic_name=jgi_thaps3 chr1 ensembl transcript 2169212 2171755 . + . ID=Thaps20950;Parent=Thaps20950;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2169212 2171755 . + 0 ID=Thaps20950;Parent=Thaps20950;rank=1 chr1 . exon 2169212 2171755 . + . ID=Thaps20950.1;Parent=Thaps20950;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2172181 2173866 . - . ID=Thaps20951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN3];external_name=Thaps20951;logic_name=jgi_thaps3 chr1 ensembl transcript 2172181 2173866 . - . ID=Thaps20951;Parent=Thaps20951;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2172181 2173866 . - 0 ID=Thaps20951;Parent=Thaps20951;rank=1 chr1 . exon 2172181 2173866 . - . ID=Thaps20951.1;Parent=Thaps20951;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2174126 2175897 . - . ID=Thaps20952;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN4];external_name=Thaps20952;logic_name=jgi_thaps3 chr1 ensembl transcript 2174126 2175897 . - . ID=Thaps20952;Parent=Thaps20952;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2174126 2174550 . - 0 ID=Thaps20952;Parent=Thaps20952;rank=5 chr1 . exon 2174126 2174550 . - . ID=Thaps20952.5;Parent=Thaps20952;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 2174631 2174681 . - 0 ID=Thaps20952;Parent=Thaps20952;rank=4 chr1 . exon 2174631 2174681 . - . ID=Thaps20952.4;Parent=Thaps20952;constitutive=1;rank=4 chr1 . CDS 2174778 2174828 . - 0 ID=Thaps20952;Parent=Thaps20952;rank=3 chr1 . CDS 2174909 2175133 . - 0 ID=Thaps20952;Parent=Thaps20952;rank=2 chr1 . CDS 2175219 2175897 . - 0 ID=Thaps20952;Parent=Thaps20952;rank=1 chr1 ensembl protein_coding_gene 2178255 2179133 . + . ID=Thaps1692;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN6];external_name=Thaps1692;logic_name=jgi_thaps3 chr1 ensembl transcript 2178255 2179133 . + . ID=Thaps1692;Parent=Thaps1692;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2178255 2179133 . + 0 ID=Thaps1692;Parent=Thaps1692;rank=1 chr1 . exon 2178255 2179133 . + . ID=Thaps1692.1;Parent=Thaps1692;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2179434 2180787 . - . ID=Thaps1693;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN7];external_name=Thaps1693;logic_name=jgi_thaps3 chr1 ensembl transcript 2179434 2180787 . - . ID=Thaps1693;Parent=Thaps1693;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2179434 2179448 . - 0 ID=Thaps1693;Parent=Thaps1693;rank=4 chr1 . exon 2179434 2179448 . - . ID=Thaps1693.4;Parent=Thaps1693;constitutive=1;rank=4 chr1 . CDS 2179585 2179631 . - 0 ID=Thaps1693;Parent=Thaps1693;rank=3 chr1 . exon 2179585 2179631 . - . ID=Thaps1693.3;Parent=Thaps1693;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2179702 2180038 . - 0 ID=Thaps1693;Parent=Thaps1693;rank=2 chr1 . exon 2179702 2180038 . - . ID=Thaps1693.2;Parent=Thaps1693;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2180122 2180787 . - 0 ID=Thaps1693;Parent=Thaps1693;rank=1 chr1 . exon 2180122 2180787 . - . ID=Thaps1693.1;Parent=Thaps1693;constitutive=1;rank=1 chr1 . exon 2174778 2174828 . - . ID=Thaps20952.3;Parent=Thaps20952;constitutive=1;rank=3 chr1 . exon 2174909 2175133 . - . ID=Thaps20952.2;Parent=Thaps20952;constitutive=1;rank=2 chr1 . exon 2175219 2175897 . - . ID=Thaps20952.1;Parent=Thaps20952;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2182217 2190259 . - . ID=Thaps20953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN8];external_name=Thaps20953;logic_name=jgi_thaps3 chr1 ensembl transcript 2182217 2190259 . - . ID=Thaps20953;Parent=Thaps20953;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2182217 2182909 . - 0 ID=Thaps20953;Parent=Thaps20953;rank=6 chr1 . exon 2182217 2182909 . - . ID=Thaps20953.6;Parent=Thaps20953;constitutive=1;rank=6 chr1 . CDS 2182993 2183319 . - 0 ID=Thaps20953;Parent=Thaps20953;rank=5 chr1 . exon 2182993 2183319 . - . ID=Thaps20953.5;Parent=Thaps20953;constitutive=1;rank=5 chr1 . CDS 2183481 2185297 . - 0 ID=Thaps20953;Parent=Thaps20953;rank=4 chr1 . exon 2183481 2185297 . - . ID=Thaps20953.4;Parent=Thaps20953;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2185378 2187141 . - 0 ID=Thaps20953;Parent=Thaps20953;rank=3 chr1 . CDS 2187300 2187422 . - 0 ID=Thaps20953;Parent=Thaps20953;rank=2 chr1 . CDS 2187589 2190259 . - 0 ID=Thaps20953;Parent=Thaps20953;rank=1 chr1 ensembl protein_coding_gene 2176246 2177553 . - . ID=Thaps31372;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN5];external_name=Thaps31372;logic_name=jgi_thaps3 chr1 ensembl transcript 2176246 2177553 . - . ID=Thaps31372;Parent=Thaps31372;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2176246 2177553 . - 0 ID=Thaps31372;Parent=Thaps31372;rank=1 chr1 . exon 2176246 2177553 . - . ID=Thaps31372.1;Parent=Thaps31372;constitutive=1;rank=1 chr1 . repeat_region 2186270 2186316 . ? . description=trf chr1 ensembl protein_coding_gene 2194174 2195211 . + . ID=Thaps1696;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRP0];external_name=Thaps1696;logic_name=jgi_thaps3 chr1 ensembl transcript 2194174 2195211 . + . ID=Thaps1696;Parent=Thaps1696;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2194174 2195211 . + 0 ID=Thaps1696;Parent=Thaps1696;rank=1 chr1 . exon 2194174 2195211 . + . ID=Thaps1696.1;Parent=Thaps1696;constitutive=1;rank=1 chr1 . exon 2185378 2187141 . - . ID=Thaps20953.3;Parent=Thaps20953;constitutive=1;rank=3 chr1 . exon 2187300 2187422 . - . ID=Thaps20953.2;Parent=Thaps20953;constitutive=1;rank=2 chr1 . exon 2187589 2190259 . - . ID=Thaps20953.1;Parent=Thaps20953;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2190768 2193641 . + . ID=Thaps20954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRN9];external_name=Thaps20954;logic_name=jgi_thaps3 chr1 ensembl transcript 2190768 2193641 . + . ID=Thaps20954;Parent=Thaps20954;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2190768 2193641 . + 0 ID=Thaps20954;Parent=Thaps20954;rank=1 chr1 . exon 2190768 2193641 . + . ID=Thaps20954.1;Parent=Thaps20954;constitutive=1;rank=1 chr1 . repeat_region 2197815 2197878 . ? . description=dust chr1 ensembl protein_coding_gene 2196643 2201143 . + . ID=Thaps20955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRP2];external_name=Thaps20955;logic_name=jgi_thaps3 chr1 ensembl transcript 2196643 2201143 . + . ID=Thaps20955;Parent=Thaps20955;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2196643 2196694 . + 0 ID=Thaps20955;Parent=Thaps20955;rank=1 chr1 . exon 2196643 2196694 . + . ID=Thaps20955.1;Parent=Thaps20955;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2196798 2197245 . + 0 ID=Thaps20955;Parent=Thaps20955;rank=2 chr1 . exon 2196798 2197245 . + . ID=Thaps20955.2;Parent=Thaps20955;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2197266 2197423 . + 0 ID=Thaps20955;Parent=Thaps20955;rank=3 chr1 . exon 2197266 2197423 . + . ID=Thaps20955.3;Parent=Thaps20955;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2197540 2198318 . + 0 ID=Thaps20955;Parent=Thaps20955;rank=4 chr1 . exon 2197540 2198318 . + . ID=Thaps20955.4;Parent=Thaps20955;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2198487 2198536 . + 0 ID=Thaps20955;Parent=Thaps20955;rank=5 chr1 . exon 2198487 2198536 . + . ID=Thaps20955.5;Parent=Thaps20955;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 2198667 2198952 . + 0 ID=Thaps20955;Parent=Thaps20955;rank=6 chr1 . exon 2198667 2198952 . + . ID=Thaps20955.6;Parent=Thaps20955;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 2199047 2200331 . + 0 ID=Thaps20955;Parent=Thaps20955;rank=7 chr1 . exon 2199047 2200331 . + . ID=Thaps20955.7;Parent=Thaps20955;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 2200410 2201143 . + 0 ID=Thaps20955;Parent=Thaps20955;rank=8 chr1 . exon 2200410 2201143 . + . ID=Thaps20955.8;Parent=Thaps20955;constitutive=1;ensembl_end_phase=2;rank=8 chr1 ensembl protein_coding_gene 2201486 2202641 . - . ID=Thaps30882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRP3];external_name=Thaps30882;logic_name=jgi_thaps3 chr1 ensembl transcript 2201486 2202641 . - . ID=Thaps30882;Parent=Thaps30882;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2201486 2201564 . - 0 ID=Thaps30882;Parent=Thaps30882;rank=4 chr1 . exon 2201486 2201564 . - . ID=Thaps30882.4;Parent=Thaps30882;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 2201646 2202255 . - 0 ID=Thaps30882;Parent=Thaps30882;rank=3 chr1 . exon 2201646 2202255 . - . ID=Thaps30882.3;Parent=Thaps30882;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2202344 2202436 . - 0 ID=Thaps30882;Parent=Thaps30882;rank=2 chr1 . exon 2202344 2202436 . - . ID=Thaps30882.2;Parent=Thaps30882;constitutive=1;rank=2 chr1 . CDS 2202527 2202641 . - 0 ID=Thaps30882;Parent=Thaps30882;rank=1 chr1 . exon 2202527 2202641 . - . ID=Thaps30882.1;Parent=Thaps30882;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2195701 2196351 . - . ID=Thaps30986;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRP1];external_name=Thaps30986;logic_name=jgi_thaps3 chr1 ensembl transcript 2195701 2196351 . - . ID=Thaps30986;Parent=Thaps30986;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2195701 2196091 . - 0 ID=Thaps30986;Parent=Thaps30986;rank=2 chr1 . exon 2195701 2196091 . - . ID=Thaps30986.2;Parent=Thaps30986;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2196179 2196351 . - 0 ID=Thaps30986;Parent=Thaps30986;rank=1 chr1 . exon 2196179 2196351 . - . ID=Thaps30986.1;Parent=Thaps30986;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2204514 2206240 . + . ID=Thaps31358;biotype=protein_coding;description=Intraflagellar transport protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRP4];external_name=Thaps31358;logic_name=jgi_thaps3 chr1 ensembl transcript 2204514 2206240 . + . ID=Thaps31358;Parent=Thaps31358;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2204514 2206056 . + 0 ID=Thaps31358;Parent=Thaps31358;rank=1 chr1 . exon 2204514 2206056 . + . ID=Thaps31358.1;Parent=Thaps31358;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2206134 2206240 . + 0 ID=Thaps31358;Parent=Thaps31358;rank=2 chr1 . repeat_region 2206815 2206869 . ? . description=trf chr1 ensembl tRNA_gene 2213266 2213349 . + . ID=EPrTPOG00000000051;biotype=tRNA;description=tRNA-Leu for anticodon AAG [Source:TRNASCAN_SE%3BAcc:tRNA-Leu];external_name=tRNA-Leu;logic_name=ncrna_eg chr1 ensembl transcript 2213266 2213349 . + . ID=EPrTPOT00000000051;Parent=EPrTPOG00000000051;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 2213266 2213349 . + . ID=EPrTPOE00000000051;Parent=EPrTPOT00000000051;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2206520 2207284 . - . ID=Thaps1701;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRP5];external_name=Thaps1701;logic_name=jgi_thaps3 chr1 ensembl transcript 2206520 2207284 . - . ID=Thaps1701;Parent=Thaps1701;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2206520 2207284 . - 0 ID=Thaps1701;Parent=Thaps1701;rank=1 chr1 . exon 2206520 2207284 . - . ID=Thaps1701.1;Parent=Thaps1701;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2214404 2216468 . - . ID=Thaps1704;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRP8];external_name=Thaps1704;logic_name=jgi_thaps3 chr1 ensembl transcript 2214404 2216468 . - . ID=Thaps1704;Parent=Thaps1704;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2214404 2215029 . - 0 ID=Thaps1704;Parent=Thaps1704;rank=2 chr1 . exon 2214404 2215029 . - . ID=Thaps1704.2;Parent=Thaps1704;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2215121 2216468 . - 0 ID=Thaps1704;Parent=Thaps1704;rank=1 chr1 ensembl protein_coding_gene 2211284 2214169 . - . ID=Thaps26082;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRP7];external_name=Thaps26082;logic_name=jgi_thaps3 chr1 ensembl transcript 2211284 2214169 . - . ID=Thaps26082;Parent=Thaps26082;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2211284 2211886 . - 0 ID=Thaps26082;Parent=Thaps26082;rank=3 chr1 . exon 2211284 2211886 . - . ID=Thaps26082.3;Parent=Thaps26082;constitutive=1;rank=3 chr1 . CDS 2211976 2212927 . - 0 ID=Thaps26082;Parent=Thaps26082;rank=2 chr1 . exon 2211976 2212927 . - . ID=Thaps26082.2;Parent=Thaps26082;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2214141 2214169 . - 0 ID=Thaps26082;Parent=Thaps26082;rank=1 chr1 . exon 2214141 2214169 . - . ID=Thaps26082.1;Parent=Thaps26082;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2209593 2211065 . + . ID=Thaps30980;biotype=protein_coding;description=GTP-binding protein engA [Source:UniProtKB/TrEMBL%3BAcc:B8BRP6];external_name=Thaps30980;logic_name=jgi_thaps3 chr1 ensembl transcript 2209593 2211065 . + . ID=Thaps30980;Parent=Thaps30980;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2209593 2209721 . + 0 ID=Thaps30980;Parent=Thaps30980;rank=1 chr1 . exon 2209593 2209721 . + . ID=Thaps30980.1;Parent=Thaps30980;constitutive=1;rank=1 chr1 . CDS 2209797 2211065 . + 0 ID=Thaps30980;Parent=Thaps30980;rank=2 chr1 . exon 2209797 2211065 . + . ID=Thaps30980.2;Parent=Thaps30980;constitutive=1;rank=2 chr1 . exon 2206134 2206240 . + . ID=Thaps31358.2;Parent=Thaps31358;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 2220054 2220083 . ? . description=dust chr1 . exon 2215121 2216468 . - . ID=Thaps1704.1;Parent=Thaps1704;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2221100 2221777 . + . ID=Thaps1706;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ0];external_name=Thaps1706;logic_name=jgi_thaps3 chr1 ensembl transcript 2221100 2221777 . + . ID=Thaps1706;Parent=Thaps1706;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2221100 2221777 . + 0 ID=Thaps1706;Parent=Thaps1706;rank=1 chr1 . exon 2221100 2221777 . + . ID=Thaps1706.1;Parent=Thaps1706;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2216947 2219673 . + . ID=Thaps20959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRP9];external_name=Thaps20959;logic_name=jgi_thaps3 chr1 ensembl transcript 2216947 2219673 . + . ID=Thaps20959;Parent=Thaps20959;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2216947 2219673 . + 0 ID=Thaps20959;Parent=Thaps20959;rank=1 chr1 . exon 2216947 2219673 . + . ID=Thaps20959.1;Parent=Thaps20959;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2222115 2223176 . - . ID=Thaps20960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ1];external_name=Thaps20960;logic_name=jgi_thaps3 chr1 ensembl transcript 2222115 2223176 . - . ID=Thaps20960;Parent=Thaps20960;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2222115 2223176 . - 0 ID=Thaps20960;Parent=Thaps20960;rank=1 chr1 . exon 2222115 2223176 . - . ID=Thaps20960.1;Parent=Thaps20960;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2223446 2224144 . - . ID=Thaps39225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ2];external_name=Thaps39225;logic_name=jgi_thaps3 chr1 ensembl transcript 2223446 2224144 . - . ID=Thaps39225;Parent=Thaps39225;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2223446 2224144 . - 0 ID=Thaps39225;Parent=Thaps39225;rank=1 chr1 . exon 2223446 2224144 . - . ID=Thaps39225.1;Parent=Thaps39225;constitutive=1;rank=1 chr1 . repeat_region 2224760 2224928 . - . description=Gypsy1ALTR_TP chr1 . repeat_region 2225106 2225129 . ? . description=trf chr1 ensembl protein_coding_gene 2229017 2229991 . - . ID=Thaps1711;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ5];external_name=Thaps1711;logic_name=jgi_thaps3 chr1 ensembl transcript 2229017 2229991 . - . ID=Thaps1711;Parent=Thaps1711;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2229017 2229991 . - 0 ID=Thaps1711;Parent=Thaps1711;rank=1 chr1 . exon 2229017 2229991 . - . ID=Thaps1711.1;Parent=Thaps1711;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2232697 2234334 . - . ID=Thaps1713;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ7];external_name=Thaps1713;logic_name=jgi_thaps3 chr1 ensembl transcript 2232697 2234334 . - . ID=Thaps1713;Parent=Thaps1713;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2232697 2234334 . - 0 ID=Thaps1713;Parent=Thaps1713;rank=1 chr1 . exon 2232697 2234334 . - . ID=Thaps1713.1;Parent=Thaps1713;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2224944 2226247 . + . ID=Thaps20962;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ3];external_name=Thaps20962;logic_name=jgi_thaps3 chr1 ensembl transcript 2224944 2226247 . + . ID=Thaps20962;Parent=Thaps20962;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2224944 2225559 . + 0 ID=Thaps20962;Parent=Thaps20962;rank=1 chr1 . exon 2224944 2225559 . + . ID=Thaps20962.1;Parent=Thaps20962;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2225643 2226247 . + 0 ID=Thaps20962;Parent=Thaps20962;rank=2 chr1 . exon 2225643 2226247 . + . ID=Thaps20962.2;Parent=Thaps20962;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2226417 2227463 . - . ID=Thaps20963;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ4];external_name=Thaps20963;logic_name=jgi_thaps3 chr1 ensembl transcript 2226417 2227463 . - . ID=Thaps20963;Parent=Thaps20963;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2226417 2227463 . - 0 ID=Thaps20963;Parent=Thaps20963;rank=1 chr1 . exon 2226417 2227463 . - . ID=Thaps20963.1;Parent=Thaps20963;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2231211 2232500 . - . ID=Thaps20964;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ6];external_name=Thaps20964;logic_name=jgi_thaps3 chr1 ensembl transcript 2231211 2232500 . - . ID=Thaps20964;Parent=Thaps20964;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2231211 2232500 . - 0 ID=Thaps20964;Parent=Thaps20964;rank=1 chr1 . exon 2231211 2232500 . - . ID=Thaps20964.1;Parent=Thaps20964;constitutive=1;rank=1 chr1 . repeat_region 2237603 2237611 . ? . description=dust chr1 ensembl protein_coding_gene 2240208 2241792 . - . ID=Thaps14293;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRR2];external_name=Thaps14293;logic_name=jgi_thaps3 chr1 ensembl transcript 2240208 2241792 . - . ID=Thaps14293;Parent=Thaps14293;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2240208 2240600 . - 0 ID=Thaps14293;Parent=Thaps14293;rank=4 chr1 . exon 2240208 2240600 . - . ID=Thaps14293.4;Parent=Thaps14293;constitutive=1;rank=4 chr1 . CDS 2240889 2241059 . - 0 ID=Thaps14293;Parent=Thaps14293;rank=3 chr1 . exon 2240889 2241059 . - . ID=Thaps14293.3;Parent=Thaps14293;constitutive=1;rank=3 chr1 . CDS 2241088 2241435 . - 0 ID=Thaps14293;Parent=Thaps14293;rank=2 chr1 . exon 2241088 2241435 . - . ID=Thaps14293.2;Parent=Thaps14293;constitutive=1;rank=2 chr1 . CDS 2241550 2241792 . - 0 ID=Thaps14293;Parent=Thaps14293;rank=1 chr1 . exon 2241550 2241792 . - . ID=Thaps14293.1;Parent=Thaps14293;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2238660 2239277 . - . ID=Thaps1716;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRR1];external_name=Thaps1716;logic_name=jgi_thaps3 chr1 ensembl transcript 2238660 2239277 . - . ID=Thaps1716;Parent=Thaps1716;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2238660 2239277 . - 0 ID=Thaps1716;Parent=Thaps1716;rank=1 chr1 . exon 2238660 2239277 . - . ID=Thaps1716.1;Parent=Thaps1716;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2235765 2236184 . + . ID=Thaps20965;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ8];external_name=Thaps20965;logic_name=jgi_thaps3 chr1 ensembl transcript 2235765 2236184 . + . ID=Thaps20965;Parent=Thaps20965;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2235765 2236184 . + 0 ID=Thaps20965;Parent=Thaps20965;rank=1 chr1 . exon 2235765 2236184 . + . ID=Thaps20965.1;Parent=Thaps20965;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2236514 2237739 . - . ID=Thaps20966;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRQ9];external_name=Thaps20966;logic_name=jgi_thaps3 chr1 ensembl transcript 2236514 2237739 . - . ID=Thaps20966;Parent=Thaps20966;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2236514 2237100 . - 0 ID=Thaps20966;Parent=Thaps20966;rank=3 chr1 . exon 2236514 2237100 . - . ID=Thaps20966.3;Parent=Thaps20966;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2237172 2237410 . - 0 ID=Thaps20966;Parent=Thaps20966;rank=2 chr1 . exon 2237172 2237410 . - . ID=Thaps20966.2;Parent=Thaps20966;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2237588 2237739 . - 0 ID=Thaps20966;Parent=Thaps20966;rank=1 chr1 . exon 2237588 2237739 . - . ID=Thaps20966.1;Parent=Thaps20966;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2243104 2244292 . + . ID=Thaps261078;biotype=protein_coding;description=Na+/H+ exchanger [Source:UniProtKB/TrEMBL%3BAcc:B8BRR3];external_name=Thaps261078;logic_name=jgi_thaps3 chr1 ensembl transcript 2243104 2244292 . + . ID=Thaps261078;Parent=Thaps261078;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2243104 2243607 . + 0 ID=Thaps261078;Parent=Thaps261078;rank=1 chr1 . exon 2243104 2243607 . + . ID=Thaps261078.1;Parent=Thaps261078;constitutive=1;rank=1 chr1 . CDS 2243726 2244292 . + 0 ID=Thaps261078;Parent=Thaps261078;rank=2 chr1 . exon 2243726 2244292 . + . ID=Thaps261078.2;Parent=Thaps261078;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2237869 2238153 . + . ID=Thaps31564;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRR0];external_name=Thaps31564;logic_name=jgi_thaps3 chr1 ensembl transcript 2237869 2238153 . + . ID=Thaps31564;Parent=Thaps31564;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2237869 2238153 . + 0 ID=Thaps31564;Parent=Thaps31564;rank=1 chr1 . exon 2237869 2238153 . + . ID=Thaps31564.1;Parent=Thaps31564;constitutive=1;rank=1 chr1 . repeat_region 2253385 2253581 . - . description=Gypsy2LTR_TP chr1 . repeat_region 2253582 2258447 . - . description=Gypsy2I_TP chr1 ensembl protein_coding_gene 2251096 2253151 . - . ID=Thaps1720;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRR5];external_name=Thaps1720;logic_name=jgi_thaps3 chr1 ensembl transcript 2251096 2253151 . - . ID=Thaps1720;Parent=Thaps1720;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2251096 2251970 . - 0 ID=Thaps1720;Parent=Thaps1720;rank=2 chr1 . exon 2251096 2251970 . - . ID=Thaps1720.2;Parent=Thaps1720;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2251993 2253151 . - 0 ID=Thaps1720;Parent=Thaps1720;rank=1 chr1 . exon 2251993 2253151 . - . ID=Thaps1720.1;Parent=Thaps1720;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2245452 2246570 . - . ID=Thaps31543;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRR4];external_name=Thaps31543;logic_name=jgi_thaps3 chr1 ensembl transcript 2245452 2246570 . - . ID=Thaps31543;Parent=Thaps31543;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2245452 2246218 . - 0 ID=Thaps31543;Parent=Thaps31543;rank=2 chr1 . exon 2245452 2246218 . - . ID=Thaps31543.2;Parent=Thaps31543;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2246306 2246570 . - 0 ID=Thaps31543;Parent=Thaps31543;rank=1 chr1 . exon 2246306 2246570 . - . ID=Thaps31543.1;Parent=Thaps31543;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2262670 2263380 . + . ID=Thaps1724;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRR8];external_name=Thaps1724;logic_name=jgi_thaps3 chr1 ensembl transcript 2262670 2263380 . + . ID=Thaps1724;Parent=Thaps1724;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2262670 2263380 . + 0 ID=Thaps1724;Parent=Thaps1724;rank=1 chr1 . exon 2262670 2263380 . + . ID=Thaps1724.1;Parent=Thaps1724;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2261392 2262336 . - . ID=Thaps31125;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRR7];external_name=Thaps31125;logic_name=jgi_thaps3 chr1 ensembl transcript 2261392 2262336 . - . ID=Thaps31125;Parent=Thaps31125;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2261392 2262336 . - 0 ID=Thaps31125;Parent=Thaps31125;rank=1 chr1 . exon 2261392 2262336 . - . ID=Thaps31125.1;Parent=Thaps31125;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2258934 2260750 . + . ID=Thaps31569;biotype=protein_coding;description=Tubulin beta [Source:UniProtKB/TrEMBL%3BAcc:B8BRR6];external_name=TUB3;logic_name=jgi_thaps3 chr1 ensembl transcript 2258934 2260750 . + . ID=Thaps31569;Parent=Thaps31569;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2258934 2258999 . + 0 ID=Thaps31569;Parent=Thaps31569;rank=1 chr1 . exon 2258934 2258999 . + . ID=Thaps31569.1;Parent=Thaps31569;constitutive=1;rank=1 chr1 . CDS 2259467 2260750 . + 0 ID=Thaps31569;Parent=Thaps31569;rank=2 chr1 . exon 2259467 2260750 . + . ID=Thaps31569.2;Parent=Thaps31569;constitutive=1;rank=2 chr1 . repeat_region 2270526 2270573 . ? . description=trf chr1 . repeat_region 2273424 2273469 . ? . description=trf chr1 ensembl protein_coding_gene 2264910 2267120 . - . ID=Thaps1725;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRR9];external_name=Thaps1725;logic_name=jgi_thaps3 chr1 ensembl transcript 2264910 2267120 . - . ID=Thaps1725;Parent=Thaps1725;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2264910 2264948 . - 0 ID=Thaps1725;Parent=Thaps1725;rank=5 chr1 . exon 2264910 2264948 . - . ID=Thaps1725.5;Parent=Thaps1725;constitutive=1;rank=5 chr1 . CDS 2265004 2265096 . - 0 ID=Thaps1725;Parent=Thaps1725;rank=4 chr1 . exon 2265004 2265096 . - . ID=Thaps1725.4;Parent=Thaps1725;constitutive=1;rank=4 chr1 . CDS 2265125 2266514 . - 0 ID=Thaps1725;Parent=Thaps1725;rank=3 chr1 . exon 2265125 2266514 . - . ID=Thaps1725.3;Parent=Thaps1725;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2266551 2266588 . - 0 ID=Thaps1725;Parent=Thaps1725;rank=2 chr1 . exon 2266551 2266588 . - . ID=Thaps1725.2;Parent=Thaps1725;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2266758 2267120 . - 0 ID=Thaps1725;Parent=Thaps1725;rank=1 chr1 . exon 2266758 2267120 . - . ID=Thaps1725.1;Parent=Thaps1725;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2267533 2268541 . - . ID=Thaps1726;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRS0];external_name=Thaps1726;logic_name=jgi_thaps3 chr1 ensembl transcript 2267533 2268541 . - . ID=Thaps1726;Parent=Thaps1726;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2267533 2267939 . - 0 ID=Thaps1726;Parent=Thaps1726;rank=3 chr1 . exon 2267533 2267939 . - . ID=Thaps1726.3;Parent=Thaps1726;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2268028 2268388 . - 0 ID=Thaps1726;Parent=Thaps1726;rank=2 chr1 . exon 2268028 2268388 . - . ID=Thaps1726.2;Parent=Thaps1726;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2268491 2268541 . - 0 ID=Thaps1726;Parent=Thaps1726;rank=1 chr1 . exon 2268491 2268541 . - . ID=Thaps1726.1;Parent=Thaps1726;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2268841 2270481 . + . ID=Thaps1727;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRS1];external_name=Thaps1727;logic_name=jgi_thaps3 chr1 ensembl transcript 2268841 2270481 . + . ID=Thaps1727;Parent=Thaps1727;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2268841 2270481 . + 0 ID=Thaps1727;Parent=Thaps1727;rank=1 chr1 . exon 2268841 2270481 . + . ID=Thaps1727.1;Parent=Thaps1727;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2271241 2271855 . - . ID=Thaps19048;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRS2];external_name=Thaps19048;logic_name=jgi_thaps3 chr1 ensembl transcript 2271241 2271855 . - . ID=Thaps19048;Parent=Thaps19048;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2271241 2271507 . - 0 ID=Thaps19048;Parent=Thaps19048;rank=2 chr1 . exon 2271241 2271507 . - . ID=Thaps19048.2;Parent=Thaps19048;constitutive=1;rank=2 chr1 . CDS 2271562 2271855 . - 0 ID=Thaps19048;Parent=Thaps19048;rank=1 chr1 . exon 2271562 2271855 . - . ID=Thaps19048.1;Parent=Thaps19048;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2274074 2277013 . - . ID=Thaps20970;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRS3];external_name=Thaps20970;logic_name=jgi_thaps3 chr1 ensembl transcript 2274074 2277013 . - . ID=Thaps20970;Parent=Thaps20970;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2274074 2277013 . - 0 ID=Thaps20970;Parent=Thaps20970;rank=1 chr1 . exon 2274074 2277013 . - . ID=Thaps20970.1;Parent=Thaps20970;constitutive=1;rank=1 chr1 . repeat_region 2278258 2278277 . ? . description=dust chr1 ensembl protein_coding_gene 2281691 2285451 . + . ID=Thaps1732;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRS6];external_name=Thaps1732;logic_name=jgi_thaps3 chr1 ensembl transcript 2281691 2285451 . + . ID=Thaps1732;Parent=Thaps1732;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2281691 2285357 . + 0 ID=Thaps1732;Parent=Thaps1732;rank=1 chr1 . exon 2281691 2285357 . + . ID=Thaps1732.1;Parent=Thaps1732;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2285444 2285451 . + 0 ID=Thaps1732;Parent=Thaps1732;rank=2 chr1 ensembl protein_coding_gene 2277499 2279652 . + . ID=Thaps20971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRS4];external_name=Thaps20971;logic_name=jgi_thaps3 chr1 ensembl transcript 2277499 2279652 . + . ID=Thaps20971;Parent=Thaps20971;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2277499 2279652 . + 0 ID=Thaps20971;Parent=Thaps20971;rank=1 chr1 . exon 2277499 2279652 . + . ID=Thaps20971.1;Parent=Thaps20971;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2279916 2280931 . + . ID=Thaps20972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRS5];external_name=Thaps20972;logic_name=jgi_thaps3 chr1 ensembl transcript 2279916 2280931 . + . ID=Thaps20972;Parent=Thaps20972;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2279916 2280243 . + 0 ID=Thaps20972;Parent=Thaps20972;rank=1 chr1 . exon 2279916 2280243 . + . ID=Thaps20972.1;Parent=Thaps20972;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2280327 2280931 . + 0 ID=Thaps20972;Parent=Thaps20972;rank=2 chr1 . exon 2280327 2280931 . + . ID=Thaps20972.2;Parent=Thaps20972;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 2287664 2287857 . + . description=Gypsy1LTR_TP chr1 . repeat_region 2288911 2288950 . - . description=scaffold_2_26_1_61133_64081 chr1 . repeat_region 2293392 2293416 . ? . description=trf chr1 . exon 2285444 2285451 . + . ID=Thaps1732.2;Parent=Thaps1732;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2288144 2290117 . - . ID=Thaps1734;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRS8];external_name=Thaps1734;logic_name=jgi_thaps3 chr1 ensembl transcript 2288144 2290117 . - . ID=Thaps1734;Parent=Thaps1734;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2288144 2288819 . - 0 ID=Thaps1734;Parent=Thaps1734;rank=2 chr1 . exon 2288144 2288819 . - . ID=Thaps1734.2;Parent=Thaps1734;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2288973 2290117 . - 0 ID=Thaps1734;Parent=Thaps1734;rank=1 chr1 . exon 2288973 2290117 . - . ID=Thaps1734.1;Parent=Thaps1734;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2285769 2286759 . - . ID=Thaps261083;biotype=protein_coding;description=Plastid RNA polymerase sigma factor [Source:UniProtKB/TrEMBL%3BAcc:B8BRS7];external_name=RPOD_1;logic_name=jgi_thaps3 chr1 ensembl transcript 2285769 2286759 . - . ID=Thaps261083;Parent=Thaps261083;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2285769 2286404 . - 0 ID=Thaps261083;Parent=Thaps261083;rank=3 chr1 . exon 2285769 2286404 . - . ID=Thaps261083.3;Parent=Thaps261083;constitutive=1;rank=3 chr1 . CDS 2286471 2286648 . - 0 ID=Thaps261083;Parent=Thaps261083;rank=2 chr1 . exon 2286471 2286648 . - . ID=Thaps261083.2;Parent=Thaps261083;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2286679 2286759 . - 0 ID=Thaps261083;Parent=Thaps261083;rank=1 chr1 . exon 2286679 2286759 . - . ID=Thaps261083.1;Parent=Thaps261083;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2293476 2293985 . - . ID=Thaps261087;biotype=protein_coding;description=Adenosylmethionine--8-amino-7-oxononanoate aminotransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BRT0];external_name=Thaps261087;logic_name=jgi_thaps3 chr1 ensembl transcript 2293476 2293985 . - . ID=Thaps261087;Parent=Thaps261087;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2293476 2293985 . - 0 ID=Thaps261087;Parent=Thaps261087;rank=1 chr1 . exon 2293476 2293985 . - . ID=Thaps261087.1;Parent=Thaps261087;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2292007 2292459 . + . ID=Thaps30832;biotype=protein_coding;description=RM11%2C ribosomal protein 11 mitochondrial large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BRS9];external_name=RM11;logic_name=jgi_thaps3 chr1 ensembl transcript 2292007 2292459 . + . ID=Thaps30832;Parent=Thaps30832;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2292007 2292459 . + 0 ID=Thaps30832;Parent=Thaps30832;rank=1 chr1 . exon 2292007 2292459 . + . ID=Thaps30832.1;Parent=Thaps30832;constitutive=1;rank=1 chr1 . repeat_region 2300353 2300363 . ? . description=dust chr1 ensembl protein_coding_gene 2299167 2300175 . - . ID=Thaps1738;biotype=protein_coding;description=ATP-dependent Clp protease proteolytic subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BRT2];external_name=Thaps1738;logic_name=jgi_thaps3 chr1 ensembl transcript 2299167 2300175 . - . ID=Thaps1738;Parent=Thaps1738;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2299167 2299814 . - 0 ID=Thaps1738;Parent=Thaps1738;rank=3 chr1 . exon 2299167 2299814 . - . ID=Thaps1738.3;Parent=Thaps1738;constitutive=1;rank=3 chr1 . CDS 2299897 2299985 . - 0 ID=Thaps1738;Parent=Thaps1738;rank=2 chr1 . exon 2299897 2299985 . - . ID=Thaps1738.2;Parent=Thaps1738;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2300130 2300175 . - 0 ID=Thaps1738;Parent=Thaps1738;rank=1 chr1 . exon 2300130 2300175 . - . ID=Thaps1738.1;Parent=Thaps1738;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2304133 2305473 . - . ID=Thaps1740;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRT4];external_name=Thaps1740;logic_name=jgi_thaps3 chr1 ensembl transcript 2304133 2305473 . - . ID=Thaps1740;Parent=Thaps1740;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2304133 2305473 . - 0 ID=Thaps1740;Parent=Thaps1740;rank=1 chr1 . exon 2304133 2305473 . - . ID=Thaps1740.1;Parent=Thaps1740;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2295445 2298853 . + . ID=Thaps20974;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRT1];external_name=Thaps20974;logic_name=jgi_thaps3 chr1 ensembl transcript 2295445 2298853 . + . ID=Thaps20974;Parent=Thaps20974;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2295445 2296244 . + 0 ID=Thaps20974;Parent=Thaps20974;rank=1 chr1 . exon 2295445 2296244 . + . ID=Thaps20974.1;Parent=Thaps20974;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2296275 2296530 . + 0 ID=Thaps20974;Parent=Thaps20974;rank=2 chr1 . exon 2296275 2296530 . + . ID=Thaps20974.2;Parent=Thaps20974;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2296567 2297785 . + 0 ID=Thaps20974;Parent=Thaps20974;rank=3 chr1 . exon 2296567 2297785 . + . ID=Thaps20974.3;Parent=Thaps20974;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2297814 2297956 . + 0 ID=Thaps20974;Parent=Thaps20974;rank=4 chr1 . exon 2297814 2297956 . + . ID=Thaps20974.4;Parent=Thaps20974;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2297987 2298853 . + 0 ID=Thaps20974;Parent=Thaps20974;rank=5 chr1 . exon 2297987 2298853 . + . ID=Thaps20974.5;Parent=Thaps20974;constitutive=1;rank=5 chr1 ensembl protein_coding_gene 2300953 2303844 . + . ID=Thaps20975;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRT3];external_name=Thaps20975;logic_name=jgi_thaps3 chr1 ensembl transcript 2300953 2303844 . + . ID=Thaps20975;Parent=Thaps20975;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2300953 2302829 . + 0 ID=Thaps20975;Parent=Thaps20975;rank=1 chr1 . exon 2300953 2302829 . + . ID=Thaps20975.1;Parent=Thaps20975;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2302851 2303844 . + 0 ID=Thaps20975;Parent=Thaps20975;rank=2 chr1 . exon 2302851 2303844 . + . ID=Thaps20975.2;Parent=Thaps20975;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 2306451 2307333 . + . ID=Thaps1741;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRT5];external_name=Thaps1741;logic_name=jgi_thaps3 chr1 ensembl transcript 2306451 2307333 . + . ID=Thaps1741;Parent=Thaps1741;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2306451 2307230 . + 0 ID=Thaps1741;Parent=Thaps1741;rank=1 chr1 . exon 2306451 2307230 . + . ID=Thaps1741.1;Parent=Thaps1741;constitutive=1;rank=1 chr1 . CDS 2307301 2307333 . + 0 ID=Thaps1741;Parent=Thaps1741;rank=2 chr1 . exon 2307301 2307333 . + . ID=Thaps1741.2;Parent=Thaps1741;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2310724 2314825 . + . ID=Thaps1743;biotype=protein_coding;description=Smc-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRT7];external_name=Thaps1743;logic_name=jgi_thaps3 chr1 ensembl transcript 2310724 2314825 . + . ID=Thaps1743;Parent=Thaps1743;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2310724 2311456 . + 0 ID=Thaps1743;Parent=Thaps1743;rank=1 chr1 . exon 2310724 2311456 . + . ID=Thaps1743.1;Parent=Thaps1743;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2311595 2312418 . + 0 ID=Thaps1743;Parent=Thaps1743;rank=2 chr1 . exon 2311595 2312418 . + . ID=Thaps1743.2;Parent=Thaps1743;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2312504 2313265 . + 0 ID=Thaps1743;Parent=Thaps1743;rank=3 chr1 . exon 2312504 2313265 . + . ID=Thaps1743.3;Parent=Thaps1743;constitutive=1;rank=3 chr1 . CDS 2313350 2313685 . + 0 ID=Thaps1743;Parent=Thaps1743;rank=4 chr1 . exon 2313350 2313685 . + . ID=Thaps1743.4;Parent=Thaps1743;constitutive=1;rank=4 chr1 . CDS 2313786 2314397 . + 0 ID=Thaps1743;Parent=Thaps1743;rank=5 chr1 . exon 2313786 2314397 . + . ID=Thaps1743.5;Parent=Thaps1743;constitutive=1;rank=5 chr1 . CDS 2314478 2314825 . + 0 ID=Thaps1743;Parent=Thaps1743;rank=6 chr1 ensembl protein_coding_gene 2307583 2310080 . - . ID=Thaps20977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRT6];external_name=Thaps20977;logic_name=jgi_thaps3 chr1 ensembl transcript 2307583 2310080 . - . ID=Thaps20977;Parent=Thaps20977;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2307583 2308733 . - 0 ID=Thaps20977;Parent=Thaps20977;rank=2 chr1 . exon 2307583 2308733 . - . ID=Thaps20977.2;Parent=Thaps20977;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2308814 2310080 . - 0 ID=Thaps20977;Parent=Thaps20977;rank=1 chr1 . exon 2308814 2310080 . - . ID=Thaps20977.1;Parent=Thaps20977;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 2316078 2316085 . ? . description=dust chr1 . repeat_region 2321637 2321651 . ? . description=dust chr1 ensembl tRNA_gene 2320413 2320493 . + . ID=EPrTPOG00000000098;biotype=tRNA;description=tRNA-Ser for anticodon GCU [Source:TRNASCAN_SE%3BAcc:tRNA-Ser];external_name=tRNA-Ser;logic_name=ncrna_eg chr1 ensembl transcript 2320413 2320493 . + . ID=EPrTPOT00000000098;Parent=EPrTPOG00000000098;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 2320413 2320493 . + . ID=EPrTPOE00000000098;Parent=EPrTPOT00000000098;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2316434 2318384 . + . ID=Thaps13444;biotype=protein_coding;description=Methylenetetrahydrofolate reductase [Source:UniProtKB/TrEMBL%3BAcc:B8BRT9];external_name=Thaps13444;logic_name=jgi_thaps3 chr1 ensembl transcript 2316434 2318384 . + . ID=Thaps13444;Parent=Thaps13444;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2316434 2317297 . + 0 ID=Thaps13444;Parent=Thaps13444;rank=1 chr1 . exon 2316434 2317297 . + . ID=Thaps13444.1;Parent=Thaps13444;constitutive=1;rank=1 chr1 . CDS 2317421 2317570 . + 0 ID=Thaps13444;Parent=Thaps13444;rank=2 chr1 . exon 2317421 2317570 . + . ID=Thaps13444.2;Parent=Thaps13444;constitutive=1;rank=2 chr1 . CDS 2317677 2318384 . + 0 ID=Thaps13444;Parent=Thaps13444;rank=3 chr1 . exon 2317677 2318384 . + . ID=Thaps13444.3;Parent=Thaps13444;constitutive=1;rank=3 chr1 . exon 2314478 2314825 . + . ID=Thaps1743.6;Parent=Thaps1743;constitutive=1;rank=6 chr1 ensembl protein_coding_gene 2314941 2316011 . - . ID=Thaps1744;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRT8];external_name=Thaps1744;logic_name=jgi_thaps3 chr1 ensembl transcript 2314941 2316011 . - . ID=Thaps1744;Parent=Thaps1744;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2314941 2316011 . - 0 ID=Thaps1744;Parent=Thaps1744;rank=1 chr1 . exon 2314941 2316011 . - . ID=Thaps1744.1;Parent=Thaps1744;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2320561 2321546 . + . ID=Thaps1747;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRU1];external_name=Thaps1747;logic_name=jgi_thaps3 chr1 ensembl transcript 2320561 2321546 . + . ID=Thaps1747;Parent=Thaps1747;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2320561 2320981 . + 0 ID=Thaps1747;Parent=Thaps1747;rank=1 chr1 . exon 2320561 2320981 . + . ID=Thaps1747.1;Parent=Thaps1747;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2321062 2321546 . + 0 ID=Thaps1747;Parent=Thaps1747;rank=2 chr1 . exon 2321062 2321546 . + . ID=Thaps1747.2;Parent=Thaps1747;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2321661 2324984 . - . ID=Thaps1748;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRU2];external_name=Thaps1748;logic_name=jgi_thaps3 chr1 ensembl transcript 2321661 2324984 . - . ID=Thaps1748;Parent=Thaps1748;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2321661 2324984 . - 0 ID=Thaps1748;Parent=Thaps1748;rank=1 chr1 . exon 2321661 2324984 . - . ID=Thaps1748.1;Parent=Thaps1748;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2318521 2319951 . - . ID=Thaps20978;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRU0];external_name=Thaps20978;logic_name=jgi_thaps3 chr1 ensembl transcript 2318521 2319951 . - . ID=Thaps20978;Parent=Thaps20978;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2318521 2319951 . - 0 ID=Thaps20978;Parent=Thaps20978;rank=1 chr1 . exon 2318521 2319951 . - . ID=Thaps20978.1;Parent=Thaps20978;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2330053 2331063 . - . ID=Thaps1750;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRU4];external_name=Thaps1750;logic_name=jgi_thaps3 chr1 ensembl transcript 2330053 2331063 . - . ID=Thaps1750;Parent=Thaps1750;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2330053 2331063 . - 0 ID=Thaps1750;Parent=Thaps1750;rank=1 chr1 . exon 2330053 2331063 . - . ID=Thaps1750.1;Parent=Thaps1750;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2333002 2334852 . - . ID=Thaps1751;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRU5];external_name=Thaps1751;logic_name=jgi_thaps3 chr1 ensembl transcript 2333002 2334852 . - . ID=Thaps1751;Parent=Thaps1751;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2333002 2334441 . - 0 ID=Thaps1751;Parent=Thaps1751;rank=2 chr1 . exon 2333002 2334441 . - . ID=Thaps1751.2;Parent=Thaps1751;constitutive=1;rank=2 chr1 . CDS 2334526 2334852 . - 0 ID=Thaps1751;Parent=Thaps1751;rank=1 chr1 ensembl protein_coding_gene 2327041 2329983 . + . ID=Thaps20979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRU3];external_name=Thaps20979;logic_name=jgi_thaps3 chr1 ensembl transcript 2327041 2329983 . + . ID=Thaps20979;Parent=Thaps20979;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2327041 2329983 . + 0 ID=Thaps20979;Parent=Thaps20979;rank=1 chr1 . exon 2327041 2329983 . + . ID=Thaps20979.1;Parent=Thaps20979;constitutive=1;rank=1 chr1 . exon 2334526 2334852 . - . ID=Thaps1751.1;Parent=Thaps1751;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2336590 2339913 . + . ID=Thaps1753;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRU7];external_name=Thaps1753;logic_name=jgi_thaps3 chr1 ensembl transcript 2336590 2339913 . + . ID=Thaps1753;Parent=Thaps1753;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2336590 2336659 . + 0 ID=Thaps1753;Parent=Thaps1753;rank=1 chr1 . exon 2336590 2336659 . + . ID=Thaps1753.1;Parent=Thaps1753;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2336714 2337642 . + 0 ID=Thaps1753;Parent=Thaps1753;rank=2 chr1 . exon 2336714 2337642 . + . ID=Thaps1753.2;Parent=Thaps1753;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2337696 2338755 . + 0 ID=Thaps1753;Parent=Thaps1753;rank=3 chr1 . exon 2337696 2338755 . + . ID=Thaps1753.3;Parent=Thaps1753;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2339078 2339913 . + 0 ID=Thaps1753;Parent=Thaps1753;rank=4 chr1 . exon 2339078 2339913 . + . ID=Thaps1753.4;Parent=Thaps1753;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 2340058 2341822 . - . ID=Thaps1754;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRU8];external_name=Thaps1754;logic_name=jgi_thaps3 chr1 ensembl transcript 2340058 2341822 . - . ID=Thaps1754;Parent=Thaps1754;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2340058 2341224 . - 0 ID=Thaps1754;Parent=Thaps1754;rank=2 chr1 . exon 2340058 2341224 . - . ID=Thaps1754.2;Parent=Thaps1754;constitutive=1;rank=2 chr1 . CDS 2341316 2341822 . - 0 ID=Thaps1754;Parent=Thaps1754;rank=1 chr1 . exon 2341316 2341822 . - . ID=Thaps1754.1;Parent=Thaps1754;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2342196 2343545 . + . ID=Thaps1755;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRU9];external_name=Thaps1755;logic_name=jgi_thaps3 chr1 ensembl transcript 2342196 2343545 . + . ID=Thaps1755;Parent=Thaps1755;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2342196 2343545 . + 0 ID=Thaps1755;Parent=Thaps1755;rank=1 chr1 . exon 2342196 2343545 . + . ID=Thaps1755.1;Parent=Thaps1755;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2334952 2335491 . + . ID=Thaps31406;biotype=protein_coding;description=Adp-ribosylation factor like protein 3 [Source:UniProtKB/TrEMBL%3BAcc:B8BRU6];external_name=ARF4;logic_name=jgi_thaps3 chr1 ensembl transcript 2334952 2335491 . + . ID=Thaps31406;Parent=Thaps31406;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2334952 2335491 . + 0 ID=Thaps31406;Parent=Thaps31406;rank=1 chr1 . exon 2334952 2335491 . + . ID=Thaps31406.1;Parent=Thaps31406;constitutive=1;rank=1 chr1 . repeat_region 2352729 2352763 . ? . description=trf chr1 ensembl protein_coding_gene 2346311 2347297 . + . ID=Thaps16236;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV1];external_name=Thaps16236;logic_name=jgi_thaps3 chr1 ensembl transcript 2346311 2347297 . + . ID=Thaps16236;Parent=Thaps16236;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2346311 2346919 . + 0 ID=Thaps16236;Parent=Thaps16236;rank=1 chr1 . exon 2346311 2346919 . + . ID=Thaps16236.1;Parent=Thaps16236;constitutive=1;rank=1 chr1 . CDS 2346968 2347297 . + 0 ID=Thaps16236;Parent=Thaps16236;rank=2 chr1 . exon 2346968 2347297 . + . ID=Thaps16236.2;Parent=Thaps16236;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2347797 2349020 . + . ID=Thaps1758;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV2];external_name=Thaps1758;logic_name=jgi_thaps3 chr1 ensembl transcript 2347797 2349020 . + . ID=Thaps1758;Parent=Thaps1758;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2347797 2349020 . + 0 ID=Thaps1758;Parent=Thaps1758;rank=1 chr1 . exon 2347797 2349020 . + . ID=Thaps1758.1;Parent=Thaps1758;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2344998 2345647 . + . ID=Thaps261093;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV0];external_name=Thaps261093;logic_name=jgi_thaps3 chr1 ensembl transcript 2344998 2345647 . + . ID=Thaps261093;Parent=Thaps261093;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2344998 2345134 . + 0 ID=Thaps261093;Parent=Thaps261093;rank=1 chr1 . exon 2344998 2345134 . + . ID=Thaps261093.1;Parent=Thaps261093;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2345228 2345647 . + 0 ID=Thaps261093;Parent=Thaps261093;rank=2 chr1 . exon 2345228 2345647 . + . ID=Thaps261093.2;Parent=Thaps261093;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2349196 2351439 . - . ID=Thaps39232;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV3];external_name=Thaps39232;logic_name=jgi_thaps3 chr1 ensembl transcript 2349196 2351439 . - . ID=Thaps39232;Parent=Thaps39232;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2349196 2349454 . - 0 ID=Thaps39232;Parent=Thaps39232;rank=5 chr1 . exon 2349196 2349454 . - . ID=Thaps39232.5;Parent=Thaps39232;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 2349541 2349707 . - 0 ID=Thaps39232;Parent=Thaps39232;rank=4 chr1 . exon 2349541 2349707 . - . ID=Thaps39232.4;Parent=Thaps39232;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2349799 2349981 . - 0 ID=Thaps39232;Parent=Thaps39232;rank=3 chr1 . exon 2349799 2349981 . - . ID=Thaps39232.3;Parent=Thaps39232;constitutive=1;rank=3 chr1 . CDS 2351038 2351150 . - 0 ID=Thaps39232;Parent=Thaps39232;rank=2 chr1 . exon 2351038 2351150 . - . ID=Thaps39232.2;Parent=Thaps39232;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2351256 2351439 . - 0 ID=Thaps39232;Parent=Thaps39232;rank=1 chr1 . exon 2351256 2351439 . - . ID=Thaps39232.1;Parent=Thaps39232;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 2356367 2356462 . ? . description=dust chr1 ensembl protein_coding_gene 2357460 2358370 . - . ID=Thaps1761;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV5];external_name=Thaps1761;logic_name=jgi_thaps3 chr1 ensembl transcript 2357460 2358370 . - . ID=Thaps1761;Parent=Thaps1761;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2357460 2358011 . - 0 ID=Thaps1761;Parent=Thaps1761;rank=2 chr1 . exon 2357460 2358011 . - . ID=Thaps1761.2;Parent=Thaps1761;constitutive=1;rank=2 chr1 . CDS 2358083 2358370 . - 0 ID=Thaps1761;Parent=Thaps1761;rank=1 chr1 . exon 2358083 2358370 . - . ID=Thaps1761.1;Parent=Thaps1761;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2358685 2359627 . + . ID=Thaps1762;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV6];external_name=Thaps1762;logic_name=jgi_thaps3 chr1 ensembl transcript 2358685 2359627 . + . ID=Thaps1762;Parent=Thaps1762;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2358685 2358914 . + 0 ID=Thaps1762;Parent=Thaps1762;rank=1 chr1 . exon 2358685 2358914 . + . ID=Thaps1762.1;Parent=Thaps1762;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2359030 2359627 . + 0 ID=Thaps1762;Parent=Thaps1762;rank=2 chr1 . exon 2359030 2359627 . + . ID=Thaps1762.2;Parent=Thaps1762;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 2361910 2363442 . + . ID=Thaps1764;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV8];external_name=Thaps1764;logic_name=jgi_thaps3 chr1 ensembl transcript 2361910 2363442 . + . ID=Thaps1764;Parent=Thaps1764;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2361910 2363442 . + 0 ID=Thaps1764;Parent=Thaps1764;rank=1 chr1 . exon 2361910 2363442 . + . ID=Thaps1764.1;Parent=Thaps1764;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2363751 2365568 . - . ID=Thaps1765;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV9];external_name=Thaps1765;logic_name=jgi_thaps3 chr1 ensembl transcript 2363751 2365568 . - . ID=Thaps1765;Parent=Thaps1765;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2363751 2365568 . - 0 ID=Thaps1765;Parent=Thaps1765;rank=1 chr1 . exon 2363751 2365568 . - . ID=Thaps1765.1;Parent=Thaps1765;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2354719 2357343 . + . ID=Thaps20982;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV4];external_name=Thaps20982;logic_name=jgi_thaps3 chr1 ensembl transcript 2354719 2357343 . + . ID=Thaps20982;Parent=Thaps20982;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2354719 2356120 . + 0 ID=Thaps20982;Parent=Thaps20982;rank=1 chr1 . exon 2354719 2356120 . + . ID=Thaps20982.1;Parent=Thaps20982;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2356334 2357343 . + 0 ID=Thaps20982;Parent=Thaps20982;rank=2 chr1 . exon 2356334 2357343 . + . ID=Thaps20982.2;Parent=Thaps20982;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2359887 2361539 . - . ID=Thaps20983;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRV7];external_name=Thaps20983;logic_name=jgi_thaps3 chr1 ensembl transcript 2359887 2361539 . - . ID=Thaps20983;Parent=Thaps20983;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2359887 2361539 . - 0 ID=Thaps20983;Parent=Thaps20983;rank=1 chr1 . exon 2359887 2361539 . - . ID=Thaps20983.1;Parent=Thaps20983;constitutive=1;rank=1 chr1 ensembl tRNA_gene 2370290 2370362 . - . ID=EPrTPOG00000000105;biotype=tRNA;description=tRNA-Lys for anticodon UUU [Source:TRNASCAN_SE%3BAcc:tRNA-Lys];external_name=tRNA-Lys;logic_name=ncrna_eg chr1 ensembl transcript 2370290 2370362 . - . ID=EPrTPOT00000000105;Parent=EPrTPOG00000000105;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 2370290 2370362 . - . ID=EPrTPOE00000000105;Parent=EPrTPOT00000000105;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2365876 2369967 . + . ID=Thaps20984;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRW0];external_name=Thaps20984;logic_name=jgi_thaps3 chr1 ensembl transcript 2365876 2369967 . + . ID=Thaps20984;Parent=Thaps20984;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2365876 2366346 . + 0 ID=Thaps20984;Parent=Thaps20984;rank=1 chr1 . exon 2365876 2366346 . + . ID=Thaps20984.1;Parent=Thaps20984;constitutive=1;rank=1 chr1 . CDS 2366749 2367789 . + 0 ID=Thaps20984;Parent=Thaps20984;rank=2 chr1 . exon 2366749 2367789 . + . ID=Thaps20984.2;Parent=Thaps20984;constitutive=1;rank=2 chr1 . CDS 2367874 2368771 . + 0 ID=Thaps20984;Parent=Thaps20984;rank=3 chr1 . exon 2367874 2368771 . + . ID=Thaps20984.3;Parent=Thaps20984;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2368856 2369967 . + 0 ID=Thaps20984;Parent=Thaps20984;rank=4 chr1 . exon 2368856 2369967 . + . ID=Thaps20984.4;Parent=Thaps20984;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 2371125 2374191 . + . ID=Thaps20985;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRW1];external_name=Thaps20985;logic_name=jgi_thaps3 chr1 ensembl transcript 2371125 2374191 . + . ID=Thaps20985;Parent=Thaps20985;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2371125 2372126 . + 0 ID=Thaps20985;Parent=Thaps20985;rank=1 chr1 . exon 2371125 2372126 . + . ID=Thaps20985.1;Parent=Thaps20985;constitutive=1;rank=1 chr1 . CDS 2372221 2373486 . + 0 ID=Thaps20985;Parent=Thaps20985;rank=2 chr1 . exon 2372221 2373486 . + . ID=Thaps20985.2;Parent=Thaps20985;constitutive=1;rank=2 chr1 . CDS 2373589 2374191 . + 0 ID=Thaps20985;Parent=Thaps20985;rank=3 chr1 . exon 2373589 2374191 . + . ID=Thaps20985.3;Parent=Thaps20985;constitutive=1;rank=3 chr1 . repeat_region 2379695 2379758 . ? . description=dust chr1 ensembl protein_coding_gene 2376838 2378535 . - . ID=Thaps1768;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRW3];external_name=Thaps1768;logic_name=jgi_thaps3 chr1 ensembl transcript 2376838 2378535 . - . ID=Thaps1768;Parent=Thaps1768;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2376838 2377779 . - 0 ID=Thaps1768;Parent=Thaps1768;rank=3 chr1 . exon 2376838 2377779 . - . ID=Thaps1768.3;Parent=Thaps1768;constitutive=1;rank=3 chr1 . CDS 2377871 2378098 . - 0 ID=Thaps1768;Parent=Thaps1768;rank=2 chr1 . exon 2377871 2378098 . - . ID=Thaps1768.2;Parent=Thaps1768;constitutive=1;rank=2 chr1 . CDS 2378170 2378535 . - 0 ID=Thaps1768;Parent=Thaps1768;rank=1 chr1 . exon 2378170 2378535 . - . ID=Thaps1768.1;Parent=Thaps1768;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2382719 2383789 . - . ID=Thaps1770;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRW5];external_name=Thaps1770;logic_name=jgi_thaps3 chr1 ensembl transcript 2382719 2383789 . - . ID=Thaps1770;Parent=Thaps1770;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2382719 2383789 . - 0 ID=Thaps1770;Parent=Thaps1770;rank=1 chr1 . exon 2382719 2383789 . - . ID=Thaps1770.1;Parent=Thaps1770;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2374392 2374601 . - . ID=Thaps20405;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRW2];external_name=Thaps20405;logic_name=jgi_thaps3 chr1 ensembl transcript 2374392 2374601 . - . ID=Thaps20405;Parent=Thaps20405;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2374392 2374601 . - 0 ID=Thaps20405;Parent=Thaps20405;rank=1 chr1 . exon 2374392 2374601 . - . ID=Thaps20405.1;Parent=Thaps20405;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2379491 2382282 . + . ID=Thaps31609;biotype=protein_coding;description=Mcm5-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRW4];external_name=Thaps31609;logic_name=jgi_thaps3 chr1 ensembl transcript 2379491 2382282 . + . ID=Thaps31609;Parent=Thaps31609;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2379491 2379664 . + 0 ID=Thaps31609;Parent=Thaps31609;rank=1 chr1 . exon 2379491 2379664 . + . ID=Thaps31609.1;Parent=Thaps31609;constitutive=1;rank=1 chr1 . CDS 2379791 2380337 . + 0 ID=Thaps31609;Parent=Thaps31609;rank=2 chr1 . exon 2379791 2380337 . + . ID=Thaps31609.2;Parent=Thaps31609;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2380377 2380857 . + 0 ID=Thaps31609;Parent=Thaps31609;rank=3 chr1 . exon 2380377 2380857 . + . ID=Thaps31609.3;Parent=Thaps31609;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2380950 2380999 . + 0 ID=Thaps31609;Parent=Thaps31609;rank=4 chr1 . exon 2380950 2380999 . + . ID=Thaps31609.4;Parent=Thaps31609;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2381079 2381336 . + 0 ID=Thaps31609;Parent=Thaps31609;rank=5 chr1 . exon 2381079 2381336 . + . ID=Thaps31609.5;Parent=Thaps31609;constitutive=1;rank=5 chr1 . CDS 2381603 2381748 . + 0 ID=Thaps31609;Parent=Thaps31609;rank=6 chr1 . exon 2381603 2381748 . + . ID=Thaps31609.6;Parent=Thaps31609;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 2381824 2382004 . + 0 ID=Thaps31609;Parent=Thaps31609;rank=7 chr1 . exon 2381824 2382004 . + . ID=Thaps31609.7;Parent=Thaps31609;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 2382071 2382282 . + 0 ID=Thaps31609;Parent=Thaps31609;rank=8 chr1 . exon 2382071 2382282 . + . ID=Thaps31609.8;Parent=Thaps31609;constitutive=1;ensembl_end_phase=2;rank=8 chr1 . repeat_region 2390333 2390352 . ? . description=trf chr1 ensembl protein_coding_gene 2384558 2385523 . + . ID=Thaps1771;biotype=protein_coding;description=Dihydrodipicolinate synthase [Source:UniProtKB/TrEMBL%3BAcc:B8BRW6];external_name=DHPS_1;logic_name=jgi_thaps3 chr1 ensembl transcript 2384558 2385523 . + . ID=Thaps1771;Parent=Thaps1771;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2384558 2385523 . + 0 ID=Thaps1771;Parent=Thaps1771;rank=1 chr1 . exon 2384558 2385523 . + . ID=Thaps1771.1;Parent=Thaps1771;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2390821 2391855 . - . ID=Thaps1773;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRW8];external_name=Thaps1773;logic_name=jgi_thaps3 chr1 ensembl transcript 2390821 2391855 . - . ID=Thaps1773;Parent=Thaps1773;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2390821 2391855 . - 0 ID=Thaps1773;Parent=Thaps1773;rank=1 chr1 . exon 2390821 2391855 . - . ID=Thaps1773.1;Parent=Thaps1773;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2385659 2389324 . - . ID=Thaps20986;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRW7];external_name=Thaps20986;logic_name=jgi_thaps3 chr1 ensembl transcript 2385659 2389324 . - . ID=Thaps20986;Parent=Thaps20986;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2385659 2386334 . - 0 ID=Thaps20986;Parent=Thaps20986;rank=2 chr1 . exon 2385659 2386334 . - . ID=Thaps20986.2;Parent=Thaps20986;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2386392 2389324 . - 0 ID=Thaps20986;Parent=Thaps20986;rank=1 chr1 . exon 2386392 2389324 . - . ID=Thaps20986.1;Parent=Thaps20986;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2392410 2393339 . + . ID=Thaps31437;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRW9];external_name=Thaps31437;logic_name=jgi_thaps3 chr1 ensembl transcript 2392410 2393339 . + . ID=Thaps31437;Parent=Thaps31437;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2392410 2392536 . + 0 ID=Thaps31437;Parent=Thaps31437;rank=1 chr1 . exon 2392410 2392536 . + . ID=Thaps31437.1;Parent=Thaps31437;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2392675 2393028 . + 0 ID=Thaps31437;Parent=Thaps31437;rank=2 chr1 . exon 2392675 2393028 . + . ID=Thaps31437.2;Parent=Thaps31437;constitutive=1;rank=2 chr1 . CDS 2393191 2393339 . + 0 ID=Thaps31437;Parent=Thaps31437;rank=3 chr1 . exon 2393191 2393339 . + . ID=Thaps31437.3;Parent=Thaps31437;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . repeat_region 2400691 2400699 . ? . description=dust chr1 ensembl protein_coding_gene 2402963 2406056 . - . ID=Thaps1778;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRX3];external_name=Thaps1778;logic_name=jgi_thaps3 chr1 ensembl transcript 2402963 2406056 . - . ID=Thaps1778;Parent=Thaps1778;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2402963 2403599 . - 0 ID=Thaps1778;Parent=Thaps1778;rank=2 chr1 . exon 2402963 2403599 . - . ID=Thaps1778.2;Parent=Thaps1778;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2403679 2406056 . - 0 ID=Thaps1778;Parent=Thaps1778;rank=1 chr1 . exon 2403679 2406056 . - . ID=Thaps1778.1;Parent=Thaps1778;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2399461 2399778 . + . ID=Thaps19928;biotype=protein_coding;description=50S ribosomal protein L20 [Source:UniProtKB/TrEMBL%3BAcc:B8BRX1];external_name=RL20;logic_name=jgi_thaps3 chr1 ensembl transcript 2399461 2399778 . + . ID=Thaps19928;Parent=Thaps19928;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2399461 2399778 . + 0 ID=Thaps19928;Parent=Thaps19928;rank=1 chr1 . exon 2399461 2399778 . + . ID=Thaps19928.1;Parent=Thaps19928;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2396994 2398551 . - . ID=Thaps20987;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRX0];external_name=Thaps20987;logic_name=jgi_thaps3 chr1 ensembl transcript 2396994 2398551 . - . ID=Thaps20987;Parent=Thaps20987;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2396994 2397786 . - 0 ID=Thaps20987;Parent=Thaps20987;rank=2 chr1 . exon 2396994 2397786 . - . ID=Thaps20987.2;Parent=Thaps20987;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2397914 2398551 . - 0 ID=Thaps20987;Parent=Thaps20987;rank=1 chr1 . exon 2397914 2398551 . - . ID=Thaps20987.1;Parent=Thaps20987;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2400906 2402832 . + . ID=Thaps20988;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRX2];external_name=Thaps20988;logic_name=jgi_thaps3 chr1 ensembl transcript 2400906 2402832 . + . ID=Thaps20988;Parent=Thaps20988;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2400906 2400988 . + 0 ID=Thaps20988;Parent=Thaps20988;rank=1 chr1 . exon 2400906 2400988 . + . ID=Thaps20988.1;Parent=Thaps20988;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2401016 2401473 . + 0 ID=Thaps20988;Parent=Thaps20988;rank=2 chr1 . exon 2401016 2401473 . + . ID=Thaps20988.2;Parent=Thaps20988;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2401549 2402756 . + 0 ID=Thaps20988;Parent=Thaps20988;rank=3 chr1 . exon 2401549 2402756 . + . ID=Thaps20988.3;Parent=Thaps20988;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2402803 2402832 . + 0 ID=Thaps20988;Parent=Thaps20988;rank=4 chr1 . exon 2402803 2402832 . + . ID=Thaps20988.4;Parent=Thaps20988;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2407205 2410099 . + . ID=Thaps1779;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRX4];external_name=Thaps1779;logic_name=jgi_thaps3 chr1 ensembl transcript 2407205 2410099 . + . ID=Thaps1779;Parent=Thaps1779;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2407205 2407972 . + 0 ID=Thaps1779;Parent=Thaps1779;rank=1 chr1 . exon 2407205 2407972 . + . ID=Thaps1779.1;Parent=Thaps1779;constitutive=1;rank=1 chr1 . CDS 2408068 2408603 . + 0 ID=Thaps1779;Parent=Thaps1779;rank=2 chr1 . exon 2408068 2408603 . + . ID=Thaps1779.2;Parent=Thaps1779;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2408813 2409422 . + 0 ID=Thaps1779;Parent=Thaps1779;rank=3 chr1 . exon 2408813 2409422 . + . ID=Thaps1779.3;Parent=Thaps1779;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2409505 2409564 . + 0 ID=Thaps1779;Parent=Thaps1779;rank=4 chr1 . exon 2409505 2409564 . + . ID=Thaps1779.4;Parent=Thaps1779;constitutive=1;rank=4 chr1 . CDS 2409614 2410099 . + 0 ID=Thaps1779;Parent=Thaps1779;rank=5 chr1 . exon 2409614 2410099 . + . ID=Thaps1779.5;Parent=Thaps1779;constitutive=1;rank=5 chr1 ensembl protein_coding_gene 2410519 2413122 . - . ID=Thaps20989;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRX5];external_name=Thaps20989;logic_name=jgi_thaps3 chr1 ensembl transcript 2410519 2413122 . - . ID=Thaps20989;Parent=Thaps20989;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2410519 2413122 . - 0 ID=Thaps20989;Parent=Thaps20989;rank=1 chr1 . exon 2410519 2413122 . - . ID=Thaps20989.1;Parent=Thaps20989;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2413813 2419780 . - . ID=Thaps20990;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRX6];external_name=Thaps20990;logic_name=jgi_thaps3 chr1 ensembl transcript 2413813 2419780 . - . ID=Thaps20990;Parent=Thaps20990;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2413813 2414846 . - 0 ID=Thaps20990;Parent=Thaps20990;rank=6 chr1 . exon 2413813 2414846 . - . ID=Thaps20990.6;Parent=Thaps20990;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 2415048 2415149 . - 0 ID=Thaps20990;Parent=Thaps20990;rank=5 chr1 . CDS 2415232 2415863 . - 0 ID=Thaps20990;Parent=Thaps20990;rank=4 chr1 . CDS 2416226 2416947 . - 0 ID=Thaps20990;Parent=Thaps20990;rank=3 chr1 . CDS 2417021 2417142 . - 0 ID=Thaps20990;Parent=Thaps20990;rank=2 chr1 . CDS 2417224 2419780 . - 0 ID=Thaps20990;Parent=Thaps20990;rank=1 chr1 ensembl protein_coding_gene 2423035 2424564 . + . ID=Thaps16613;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRX7];external_name=Thaps16613;logic_name=jgi_thaps3 chr1 ensembl transcript 2423035 2424564 . + . ID=Thaps16613;Parent=Thaps16613;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2423035 2423296 . + 0 ID=Thaps16613;Parent=Thaps16613;rank=1 chr1 . exon 2423035 2423296 . + . ID=Thaps16613.1;Parent=Thaps16613;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2423858 2424187 . + 0 ID=Thaps16613;Parent=Thaps16613;rank=2 chr1 . exon 2423858 2424187 . + . ID=Thaps16613.2;Parent=Thaps16613;constitutive=1;rank=2 chr1 . CDS 2424254 2424564 . + 0 ID=Thaps16613;Parent=Thaps16613;rank=3 chr1 . exon 2415048 2415149 . - . ID=Thaps20990.5;Parent=Thaps20990;constitutive=1;rank=5 chr1 . exon 2415232 2415863 . - . ID=Thaps20990.4;Parent=Thaps20990;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 2416226 2416947 . - . ID=Thaps20990.3;Parent=Thaps20990;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 2417021 2417142 . - . ID=Thaps20990.2;Parent=Thaps20990;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 2417224 2419780 . - . ID=Thaps20990.1;Parent=Thaps20990;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 2430237 2430300 . ? . description=dust chr1 . repeat_region 2430255 2430293 . ? . description=trf chr1 . exon 2424254 2424564 . + . ID=Thaps16613.3;Parent=Thaps16613;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2424938 2428313 . - . ID=Thaps1783;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRX8];external_name=Thaps1783;logic_name=jgi_thaps3 chr1 ensembl transcript 2424938 2428313 . - . ID=Thaps1783;Parent=Thaps1783;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2424938 2426041 . - 0 ID=Thaps1783;Parent=Thaps1783;rank=4 chr1 . exon 2424938 2426041 . - . ID=Thaps1783.4;Parent=Thaps1783;constitutive=1;rank=4 chr1 . CDS 2426446 2427054 . - 0 ID=Thaps1783;Parent=Thaps1783;rank=3 chr1 . exon 2426446 2427054 . - . ID=Thaps1783.3;Parent=Thaps1783;constitutive=1;rank=3 chr1 . CDS 2427085 2427919 . - 0 ID=Thaps1783;Parent=Thaps1783;rank=2 chr1 . exon 2427085 2427919 . - . ID=Thaps1783.2;Parent=Thaps1783;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2428189 2428313 . - 0 ID=Thaps1783;Parent=Thaps1783;rank=1 chr1 . exon 2428189 2428313 . - . ID=Thaps1783.1;Parent=Thaps1783;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2430662 2432423 . - . ID=Thaps1785;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRY0];external_name=Thaps1785;logic_name=jgi_thaps3 chr1 ensembl transcript 2430662 2432423 . - . ID=Thaps1785;Parent=Thaps1785;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2430662 2431576 . - 0 ID=Thaps1785;Parent=Thaps1785;rank=4 chr1 . exon 2430662 2431576 . - . ID=Thaps1785.4;Parent=Thaps1785;constitutive=1;rank=4 chr1 . CDS 2431666 2431698 . - 0 ID=Thaps1785;Parent=Thaps1785;rank=3 chr1 . exon 2431666 2431698 . - . ID=Thaps1785.3;Parent=Thaps1785;constitutive=1;rank=3 chr1 . CDS 2431791 2431847 . - 0 ID=Thaps1785;Parent=Thaps1785;rank=2 chr1 . exon 2431791 2431847 . - . ID=Thaps1785.2;Parent=Thaps1785;constitutive=1;rank=2 chr1 . CDS 2431947 2432423 . - 0 ID=Thaps1785;Parent=Thaps1785;rank=1 chr1 . exon 2431947 2432423 . - . ID=Thaps1785.1;Parent=Thaps1785;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2433202 2436209 . + . ID=Thaps1786;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRY1];external_name=Thaps1786;logic_name=jgi_thaps3 chr1 ensembl transcript 2433202 2436209 . + . ID=Thaps1786;Parent=Thaps1786;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2433202 2435376 . + 0 ID=Thaps1786;Parent=Thaps1786;rank=1 chr1 . exon 2433202 2435376 . + . ID=Thaps1786.1;Parent=Thaps1786;constitutive=1;rank=1 chr1 . CDS 2435448 2436209 . + 0 ID=Thaps1786;Parent=Thaps1786;rank=2 chr1 ensembl protein_coding_gene 2429082 2430239 . - . ID=Thaps20992;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRX9];external_name=Thaps20992;logic_name=jgi_thaps3 chr1 ensembl transcript 2429082 2430239 . - . ID=Thaps20992;Parent=Thaps20992;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2429082 2430239 . - 0 ID=Thaps20992;Parent=Thaps20992;rank=1 chr1 . exon 2429082 2430239 . - . ID=Thaps20992.1;Parent=Thaps20992;constitutive=1;rank=1 chr1 . exon 2435448 2436209 . + . ID=Thaps1786.2;Parent=Thaps1786;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2438518 2439267 . - . ID=Thaps1788;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRY3];external_name=Thaps1788;logic_name=jgi_thaps3 chr1 ensembl transcript 2438518 2439267 . - . ID=Thaps1788;Parent=Thaps1788;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2438518 2439267 . - 0 ID=Thaps1788;Parent=Thaps1788;rank=1 chr1 . exon 2438518 2439267 . - . ID=Thaps1788.1;Parent=Thaps1788;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2443089 2444327 . + . ID=Thaps1791;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRY6];external_name=Thaps1791;logic_name=jgi_thaps3 chr1 ensembl transcript 2443089 2444327 . + . ID=Thaps1791;Parent=Thaps1791;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2443089 2444327 . + 0 ID=Thaps1791;Parent=Thaps1791;rank=1 chr1 . exon 2443089 2444327 . + . ID=Thaps1791.1;Parent=Thaps1791;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2439955 2441724 . + . ID=Thaps20993;biotype=protein_coding;description=Heat shock protein HslVU%2C ATPase [Source:UniProtKB/TrEMBL%3BAcc:B8BRY4];external_name=Thaps20993;logic_name=jgi_thaps3 chr1 ensembl transcript 2439955 2441724 . + . ID=Thaps20993;Parent=Thaps20993;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2439955 2441343 . + 0 ID=Thaps20993;Parent=Thaps20993;rank=1 chr1 . exon 2439955 2441343 . + . ID=Thaps20993.1;Parent=Thaps20993;constitutive=1;rank=1 chr1 . CDS 2441440 2441724 . + 0 ID=Thaps20993;Parent=Thaps20993;rank=2 chr1 . exon 2441440 2441724 . + . ID=Thaps20993.2;Parent=Thaps20993;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2436393 2437575 . - . ID=Thaps261102;biotype=protein_coding;description=Carboxyl-terminal protease [Source:UniProtKB/TrEMBL%3BAcc:B8BRY2];external_name=Thaps261102;logic_name=jgi_thaps3 chr1 ensembl transcript 2436393 2437575 . - . ID=Thaps261102;Parent=Thaps261102;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2436393 2437575 . - 0 ID=Thaps261102;Parent=Thaps261102;rank=1 chr1 . exon 2436393 2437575 . - . ID=Thaps261102.1;Parent=Thaps261102;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2441837 2442523 . - . ID=Thaps39241;biotype=protein_coding;description=Rab-type small G protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRY5];external_name=Thaps39241;logic_name=jgi_thaps3 chr1 ensembl transcript 2441837 2442523 . - . ID=Thaps39241;Parent=Thaps39241;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2441837 2442311 . - 0 ID=Thaps39241;Parent=Thaps39241;rank=2 chr1 . exon 2441837 2442311 . - . ID=Thaps39241.2;Parent=Thaps39241;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2442372 2442523 . - 0 ID=Thaps39241;Parent=Thaps39241;rank=1 chr1 . exon 2442372 2442523 . - . ID=Thaps39241.1;Parent=Thaps39241;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 2446017 2446045 . ? . description=trf chr1 . repeat_region 2446763 2446800 . ? . description=trf chr1 . repeat_region 2448277 2448303 . ? . description=trf chr1 ensembl protein_coding_gene 2444878 2445309 . - . ID=Thaps18198;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRY7];external_name=Thaps18198;logic_name=jgi_thaps3 chr1 ensembl transcript 2444878 2445309 . - . ID=Thaps18198;Parent=Thaps18198;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2444878 2445309 . - 0 ID=Thaps18198;Parent=Thaps18198;rank=1 chr1 . exon 2444878 2445309 . - . ID=Thaps18198.1;Parent=Thaps18198;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2448309 2450417 . + . ID=Thaps20996;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRY8];external_name=Thaps20996;logic_name=jgi_thaps3 chr1 ensembl transcript 2448309 2450417 . + . ID=Thaps20996;Parent=Thaps20996;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2448309 2450417 . + 0 ID=Thaps20996;Parent=Thaps20996;rank=1 chr1 . exon 2448309 2450417 . + . ID=Thaps20996.1;Parent=Thaps20996;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2451062 2452422 . - . ID=Thaps20997;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRY9];external_name=Thaps20997;logic_name=jgi_thaps3 chr1 ensembl transcript 2451062 2452422 . - . ID=Thaps20997;Parent=Thaps20997;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2451062 2451361 . - 0 ID=Thaps20997;Parent=Thaps20997;rank=4 chr1 . exon 2451062 2451361 . - . ID=Thaps20997.4;Parent=Thaps20997;constitutive=1;rank=4 chr1 . CDS 2451450 2451704 . - 0 ID=Thaps20997;Parent=Thaps20997;rank=3 chr1 . exon 2451450 2451704 . - . ID=Thaps20997.3;Parent=Thaps20997;constitutive=1;rank=3 chr1 . CDS 2451870 2452268 . - 0 ID=Thaps20997;Parent=Thaps20997;rank=2 chr1 . exon 2451870 2452268 . - . ID=Thaps20997.2;Parent=Thaps20997;constitutive=1;rank=2 chr1 . CDS 2452357 2452422 . - 0 ID=Thaps20997;Parent=Thaps20997;rank=1 chr1 . exon 2452357 2452422 . - . ID=Thaps20997.1;Parent=Thaps20997;constitutive=1;rank=1 chr1 . repeat_region 2456861 2456917 . ? . description=dust chr1 ensembl protein_coding_gene 2459967 2461818 . - . ID=Thaps1797;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ2];external_name=Thaps1797;logic_name=jgi_thaps3 chr1 ensembl transcript 2459967 2461818 . - . ID=Thaps1797;Parent=Thaps1797;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2459967 2460878 . - 0 ID=Thaps1797;Parent=Thaps1797;rank=2 chr1 . exon 2459967 2460878 . - . ID=Thaps1797.2;Parent=Thaps1797;constitutive=1;rank=2 chr1 . CDS 2460976 2461818 . - 0 ID=Thaps1797;Parent=Thaps1797;rank=1 chr1 . exon 2460976 2461818 . - . ID=Thaps1797.1;Parent=Thaps1797;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2462503 2463300 . + . ID=Thaps1798;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ3];external_name=Thaps1798;logic_name=jgi_thaps3 chr1 ensembl transcript 2462503 2463300 . + . ID=Thaps1798;Parent=Thaps1798;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2462503 2463300 . + 0 ID=Thaps1798;Parent=Thaps1798;rank=1 chr1 . exon 2462503 2463300 . + . ID=Thaps1798.1;Parent=Thaps1798;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2457737 2459582 . + . ID=Thaps20998;biotype=protein_coding;description=Microtubule-associated protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ1];external_name=Thaps20998;logic_name=jgi_thaps3 chr1 ensembl transcript 2457737 2459582 . + . ID=Thaps20998;Parent=Thaps20998;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2457737 2457867 . + 0 ID=Thaps20998;Parent=Thaps20998;rank=1 chr1 . exon 2457737 2457867 . + . ID=Thaps20998.1;Parent=Thaps20998;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2457980 2459582 . + 0 ID=Thaps20998;Parent=Thaps20998;rank=2 chr1 . exon 2457980 2459582 . + . ID=Thaps20998.2;Parent=Thaps20998;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 2455188 2456264 . - . ID=Thaps31391;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ0];external_name=Thaps31391;logic_name=jgi_thaps3 chr1 ensembl transcript 2455188 2456264 . - . ID=Thaps31391;Parent=Thaps31391;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2455188 2455422 . - 0 ID=Thaps31391;Parent=Thaps31391;rank=3 chr1 . exon 2455188 2455422 . - . ID=Thaps31391.3;Parent=Thaps31391;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2455498 2455601 . - 0 ID=Thaps31391;Parent=Thaps31391;rank=2 chr1 . exon 2455498 2455601 . - . ID=Thaps31391.2;Parent=Thaps31391;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2455668 2456264 . - 0 ID=Thaps31391;Parent=Thaps31391;rank=1 chr1 . exon 2455668 2456264 . - . ID=Thaps31391.1;Parent=Thaps31391;constitutive=1;rank=1 chr1 . repeat_region 2471111 2471137 . ? . description=trf chr1 . repeat_region 2473501 2473523 . ? . description=trf chr1 ensembl protein_coding_gene 2464224 2464649 . - . ID=Thaps1799;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ4];external_name=Thaps1799;logic_name=jgi_thaps3 chr1 ensembl transcript 2464224 2464649 . - . ID=Thaps1799;Parent=Thaps1799;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2464224 2464649 . - 0 ID=Thaps1799;Parent=Thaps1799;rank=1 chr1 . exon 2464224 2464649 . - . ID=Thaps1799.1;Parent=Thaps1799;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2473816 2480038 . + . ID=Thaps1804;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ9];external_name=Thaps1804;logic_name=jgi_thaps3 chr1 ensembl transcript 2473816 2480038 . + . ID=Thaps1804;Parent=Thaps1804;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2473816 2473839 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=1 chr1 . exon 2473816 2473839 . + . ID=Thaps1804.1;Parent=Thaps1804;constitutive=1;rank=1 chr1 . CDS 2473971 2474034 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=2 chr1 . exon 2473971 2474034 . + . ID=Thaps1804.2;Parent=Thaps1804;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2474182 2474997 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=3 chr1 . CDS 2475078 2475350 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=4 chr1 . CDS 2475427 2475556 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=5 chr1 . CDS 2475639 2476121 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=6 chr1 . CDS 2476202 2476580 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=7 chr1 . CDS 2476655 2476802 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=8 chr1 . CDS 2476938 2478678 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=9 chr1 . CDS 2478757 2480038 . + 0 ID=Thaps1804;Parent=Thaps1804;rank=10 chr1 ensembl protein_coding_gene 2465719 2466744 . - . ID=Thaps20999;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ5];external_name=Thaps20999;logic_name=jgi_thaps3 chr1 ensembl transcript 2465719 2466744 . - . ID=Thaps20999;Parent=Thaps20999;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2465719 2466744 . - 0 ID=Thaps20999;Parent=Thaps20999;rank=1 chr1 . exon 2465719 2466744 . - . ID=Thaps20999.1;Parent=Thaps20999;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2467737 2468696 . + . ID=Thaps21000;biotype=protein_coding;description=Cyclin protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ6];external_name=Thaps21000;logic_name=jgi_thaps3 chr1 ensembl transcript 2467737 2468696 . + . ID=Thaps21000;Parent=Thaps21000;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2467737 2468696 . + 0 ID=Thaps21000;Parent=Thaps21000;rank=1 chr1 . exon 2467737 2468696 . + . ID=Thaps21000.1;Parent=Thaps21000;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2469187 2470149 . + . ID=Thaps21001;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ7];external_name=Thaps21001;logic_name=jgi_thaps3 chr1 ensembl transcript 2469187 2470149 . + . ID=Thaps21001;Parent=Thaps21001;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2469187 2470149 . + 0 ID=Thaps21001;Parent=Thaps21001;rank=1 chr1 . exon 2469187 2470149 . + . ID=Thaps21001.1;Parent=Thaps21001;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2470358 2473099 . - . ID=Thaps21002;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BRZ8];external_name=Thaps21002;logic_name=jgi_thaps3 chr1 ensembl transcript 2470358 2473099 . - . ID=Thaps21002;Parent=Thaps21002;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2470358 2473099 . - 0 ID=Thaps21002;Parent=Thaps21002;rank=1 chr1 . exon 2470358 2473099 . - . ID=Thaps21002.1;Parent=Thaps21002;constitutive=1;rank=1 chr1 . repeat_region 2482518 2482577 . ? . description=dust chr1 . exon 2474182 2474997 . + . ID=Thaps1804.3;Parent=Thaps1804;constitutive=1;rank=3 chr1 . exon 2475078 2475350 . + . ID=Thaps1804.4;Parent=Thaps1804;constitutive=1;rank=4 chr1 . exon 2475427 2475556 . + . ID=Thaps1804.5;Parent=Thaps1804;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . exon 2475639 2476121 . + . ID=Thaps1804.6;Parent=Thaps1804;constitutive=1;rank=6 chr1 . exon 2476202 2476580 . + . ID=Thaps1804.7;Parent=Thaps1804;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . exon 2476655 2476802 . + . ID=Thaps1804.8;Parent=Thaps1804;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . exon 2476938 2478678 . + . ID=Thaps1804.9;Parent=Thaps1804;constitutive=1;ensembl_end_phase=1;rank=9 chr1 . exon 2478757 2480038 . + . ID=Thaps1804.10;Parent=Thaps1804;constitutive=1;ensembl_end_phase=1;rank=10 chr1 ensembl protein_coding_gene 2481513 2482757 . + . ID=Thaps1806;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS01];external_name=Thaps1806;logic_name=jgi_thaps3 chr1 ensembl transcript 2481513 2482757 . + . ID=Thaps1806;Parent=Thaps1806;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2481513 2481526 . + 0 ID=Thaps1806;Parent=Thaps1806;rank=1 chr1 . exon 2481513 2481526 . + . ID=Thaps1806.1;Parent=Thaps1806;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2481797 2482757 . + 0 ID=Thaps1806;Parent=Thaps1806;rank=2 chr1 . exon 2481797 2482757 . + . ID=Thaps1806.2;Parent=Thaps1806;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 2483034 2483597 . - . ID=Thaps1807;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS02];external_name=Thaps1807;logic_name=jgi_thaps3 chr1 ensembl transcript 2483034 2483597 . - . ID=Thaps1807;Parent=Thaps1807;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2483034 2483597 . - 0 ID=Thaps1807;Parent=Thaps1807;rank=1 chr1 . exon 2483034 2483597 . - . ID=Thaps1807.1;Parent=Thaps1807;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2480140 2481327 . - . ID=Thaps21003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS00];external_name=Thaps21003;logic_name=jgi_thaps3 chr1 ensembl transcript 2480140 2481327 . - . ID=Thaps21003;Parent=Thaps21003;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2480140 2481009 . - 0 ID=Thaps21003;Parent=Thaps21003;rank=3 chr1 . exon 2480140 2481009 . - . ID=Thaps21003.3;Parent=Thaps21003;constitutive=1;rank=3 chr1 . CDS 2481032 2481209 . - 0 ID=Thaps21003;Parent=Thaps21003;rank=2 chr1 . exon 2481032 2481209 . - . ID=Thaps21003.2;Parent=Thaps21003;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2481272 2481327 . - 0 ID=Thaps21003;Parent=Thaps21003;rank=1 chr1 . exon 2481272 2481327 . - . ID=Thaps21003.1;Parent=Thaps21003;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . biological_region 2490495 2490495 0.999 + . logic_name=eponine chr1 ensembl protein_coding_gene 2489559 2490581 . - . ID=Thaps14192;biotype=protein_coding;description=Ferrochelatase [Source:UniProtKB/TrEMBL%3BAcc:B8BS05];external_name=Thaps14192;logic_name=jgi_thaps3 chr1 ensembl transcript 2489559 2490581 . - . ID=Thaps14192;Parent=Thaps14192;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2489559 2490581 . - 0 ID=Thaps14192;Parent=Thaps14192;rank=1 chr1 . exon 2489559 2490581 . - . ID=Thaps14192.1;Parent=Thaps14192;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2484034 2486902 . + . ID=Thaps21004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS03];external_name=Thaps21004;logic_name=jgi_thaps3 chr1 ensembl transcript 2484034 2486902 . + . ID=Thaps21004;Parent=Thaps21004;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2484034 2485165 . + 0 ID=Thaps21004;Parent=Thaps21004;rank=1 chr1 . exon 2484034 2485165 . + . ID=Thaps21004.1;Parent=Thaps21004;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2485266 2485701 . + 0 ID=Thaps21004;Parent=Thaps21004;rank=2 chr1 . exon 2485266 2485701 . + . ID=Thaps21004.2;Parent=Thaps21004;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2485945 2486902 . + 0 ID=Thaps21004;Parent=Thaps21004;rank=3 chr1 . exon 2485945 2486902 . + . ID=Thaps21004.3;Parent=Thaps21004;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 2487156 2488186 . - . ID=Thaps261109;biotype=protein_coding;description=HSP70 domain-containing protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS04];external_name=Thaps261109;logic_name=jgi_thaps3 chr1 ensembl transcript 2487156 2488186 . - . ID=Thaps261109;Parent=Thaps261109;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2487156 2487460 . - 0 ID=Thaps261109;Parent=Thaps261109;rank=3 chr1 . exon 2487156 2487460 . - . ID=Thaps261109.3;Parent=Thaps261109;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2487500 2488063 . - 0 ID=Thaps261109;Parent=Thaps261109;rank=2 chr1 . exon 2487500 2488063 . - . ID=Thaps261109.2;Parent=Thaps261109;constitutive=1;rank=2 chr1 . CDS 2488115 2488186 . - 0 ID=Thaps261109;Parent=Thaps261109;rank=1 chr1 . exon 2488115 2488186 . - . ID=Thaps261109.1;Parent=Thaps261109;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2493336 2493822 . - . ID=Thaps261112;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS07];external_name=Thaps261112;logic_name=jgi_thaps3 chr1 ensembl transcript 2493336 2493822 . - . ID=Thaps261112;Parent=Thaps261112;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2493336 2493822 . - 0 ID=Thaps261112;Parent=Thaps261112;rank=1 chr1 . exon 2493336 2493822 . - . ID=Thaps261112.1;Parent=Thaps261112;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2491215 2492616 . + . ID=Thaps31362;biotype=protein_coding;description=Precursor of synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BS06];external_name=SCS1;logic_name=jgi_thaps3 chr1 ensembl transcript 2491215 2492616 . + . ID=Thaps31362;Parent=Thaps31362;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2491215 2491356 . + 0 ID=Thaps31362;Parent=Thaps31362;rank=1 chr1 . exon 2491215 2491356 . + . ID=Thaps31362.1;Parent=Thaps31362;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2491499 2492616 . + 0 ID=Thaps31362;Parent=Thaps31362;rank=2 chr1 . exon 2491499 2492616 . + . ID=Thaps31362.2;Parent=Thaps31362;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 2494815 2494822 . ? . description=dust chr1 . repeat_region 2499972 2499979 . ? . description=dust chr1 ensembl protein_coding_gene 2494221 2494630 . + . ID=Thaps1814;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS08];external_name=Thaps1814;logic_name=jgi_thaps3 chr1 ensembl transcript 2494221 2494630 . + . ID=Thaps1814;Parent=Thaps1814;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2494221 2494475 . + 0 ID=Thaps1814;Parent=Thaps1814;rank=1 chr1 . exon 2494221 2494475 . + . ID=Thaps1814.1;Parent=Thaps1814;constitutive=1;rank=1 chr1 . CDS 2494553 2494630 . + 0 ID=Thaps1814;Parent=Thaps1814;rank=2 chr1 . exon 2494553 2494630 . + . ID=Thaps1814.2;Parent=Thaps1814;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2499131 2499920 . + . ID=Thaps1817;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS10];external_name=Thaps1817;logic_name=jgi_thaps3 chr1 ensembl transcript 2499131 2499920 . + . ID=Thaps1817;Parent=Thaps1817;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2499131 2499438 . + 0 ID=Thaps1817;Parent=Thaps1817;rank=1 chr1 . exon 2499131 2499438 . + . ID=Thaps1817.1;Parent=Thaps1817;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2499528 2499544 . + 0 ID=Thaps1817;Parent=Thaps1817;rank=2 chr1 . exon 2499528 2499544 . + . ID=Thaps1817.2;Parent=Thaps1817;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2499733 2499920 . + 0 ID=Thaps1817;Parent=Thaps1817;rank=3 chr1 . exon 2499733 2499920 . + . ID=Thaps1817.3;Parent=Thaps1817;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2500181 2500933 . - . ID=Thaps1818;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS11];external_name=Thaps1818;logic_name=jgi_thaps3 chr1 ensembl transcript 2500181 2500933 . - . ID=Thaps1818;Parent=Thaps1818;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2500181 2500933 . - 0 ID=Thaps1818;Parent=Thaps1818;rank=1 chr1 . exon 2500181 2500933 . - . ID=Thaps1818.1;Parent=Thaps1818;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2501144 2502890 . + . ID=Thaps1819;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS12];external_name=Thaps1819;logic_name=jgi_thaps3 chr1 ensembl transcript 2501144 2502890 . + . ID=Thaps1819;Parent=Thaps1819;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2501144 2501677 . + 0 ID=Thaps1819;Parent=Thaps1819;rank=1 chr1 . exon 2501144 2501677 . + . ID=Thaps1819.1;Parent=Thaps1819;constitutive=1;rank=1 chr1 . CDS 2501780 2502321 . + 0 ID=Thaps1819;Parent=Thaps1819;rank=2 chr1 . exon 2501780 2502321 . + . ID=Thaps1819.2;Parent=Thaps1819;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2502401 2502458 . + 0 ID=Thaps1819;Parent=Thaps1819;rank=3 chr1 . exon 2502401 2502458 . + . ID=Thaps1819.3;Parent=Thaps1819;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2502531 2502890 . + 0 ID=Thaps1819;Parent=Thaps1819;rank=4 chr1 . exon 2502531 2502890 . + . ID=Thaps1819.4;Parent=Thaps1819;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2495163 2498534 . - . ID=Thaps26806;biotype=protein_coding;description=U5 small nuclear ribonucleoprotein%2C U5 snRNP [Source:UniProtKB/TrEMBL%3BAcc:B8BS09];external_name=Thaps26806;logic_name=jgi_thaps3 chr1 ensembl transcript 2495163 2498534 . - . ID=Thaps26806;Parent=Thaps26806;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2495163 2495951 . - 0 ID=Thaps26806;Parent=Thaps26806;rank=9 chr1 . exon 2495163 2495951 . - . ID=Thaps26806.9;Parent=Thaps26806;constitutive=1;rank=9 chr1 . CDS 2496035 2496142 . - 0 ID=Thaps26806;Parent=Thaps26806;rank=8 chr1 . exon 2496035 2496142 . - . ID=Thaps26806.8;Parent=Thaps26806;constitutive=1;rank=8 chr1 . CDS 2496236 2496523 . - 0 ID=Thaps26806;Parent=Thaps26806;rank=7 chr1 . exon 2496236 2496523 . - . ID=Thaps26806.7;Parent=Thaps26806;constitutive=1;rank=7 chr1 . CDS 2496636 2496901 . - 0 ID=Thaps26806;Parent=Thaps26806;rank=6 chr1 . exon 2496636 2496901 . - . ID=Thaps26806.6;Parent=Thaps26806;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 2496995 2497191 . - 0 ID=Thaps26806;Parent=Thaps26806;rank=5 chr1 . exon 2496995 2497191 . - . ID=Thaps26806.5;Parent=Thaps26806;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 2497276 2497616 . - 0 ID=Thaps26806;Parent=Thaps26806;rank=4 chr1 . exon 2497276 2497616 . - . ID=Thaps26806.4;Parent=Thaps26806;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2497683 2498181 . - 0 ID=Thaps26806;Parent=Thaps26806;rank=3 chr1 . exon 2497683 2498181 . - . ID=Thaps26806.3;Parent=Thaps26806;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2498239 2498385 . - 0 ID=Thaps26806;Parent=Thaps26806;rank=2 chr1 . exon 2498239 2498385 . - . ID=Thaps26806.2;Parent=Thaps26806;constitutive=1;rank=2 chr1 . CDS 2498452 2498534 . - 0 ID=Thaps26806;Parent=Thaps26806;rank=1 chr1 . exon 2498452 2498534 . - . ID=Thaps26806.1;Parent=Thaps26806;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 2510366 2510408 . ? . description=trf chr1 ensembl protein_coding_gene 2506381 2507502 . - . ID=Thaps16507;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS14];external_name=Thaps16507;logic_name=jgi_thaps3 chr1 ensembl transcript 2506381 2507502 . - . ID=Thaps16507;Parent=Thaps16507;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2506381 2507112 . - 0 ID=Thaps16507;Parent=Thaps16507;rank=2 chr1 . exon 2506381 2507112 . - . ID=Thaps16507.2;Parent=Thaps16507;constitutive=1;rank=2 chr1 . CDS 2507299 2507502 . - 0 ID=Thaps16507;Parent=Thaps16507;rank=1 chr1 . exon 2507299 2507502 . - . ID=Thaps16507.1;Parent=Thaps16507;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2504323 2506227 . + . ID=Thaps1820;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS13];external_name=Thaps1820;logic_name=jgi_thaps3 chr1 ensembl transcript 2504323 2506227 . + . ID=Thaps1820;Parent=Thaps1820;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2504323 2506227 . + 0 ID=Thaps1820;Parent=Thaps1820;rank=1 chr1 . exon 2504323 2506227 . + . ID=Thaps1820.1;Parent=Thaps1820;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2508840 2511958 . + . ID=Thaps1822;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS15];external_name=Thaps1822;logic_name=jgi_thaps3 chr1 ensembl transcript 2508840 2511958 . + . ID=Thaps1822;Parent=Thaps1822;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2508840 2508925 . + 0 ID=Thaps1822;Parent=Thaps1822;rank=1 chr1 . exon 2508840 2508925 . + . ID=Thaps1822.1;Parent=Thaps1822;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2509029 2509500 . + 0 ID=Thaps1822;Parent=Thaps1822;rank=2 chr1 . exon 2509029 2509500 . + . ID=Thaps1822.2;Parent=Thaps1822;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2509578 2511806 . + 0 ID=Thaps1822;Parent=Thaps1822;rank=3 chr1 . exon 2509578 2511806 . + . ID=Thaps1822.3;Parent=Thaps1822;constitutive=1;rank=3 chr1 . CDS 2511923 2511958 . + 0 ID=Thaps1822;Parent=Thaps1822;rank=4 chr1 . exon 2511923 2511958 . + . ID=Thaps1822.4;Parent=Thaps1822;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2512941 2513435 . - . ID=Thaps31298;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS16];external_name=Thaps31298;logic_name=jgi_thaps3 chr1 ensembl transcript 2512941 2513435 . - . ID=Thaps31298;Parent=Thaps31298;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2512941 2513435 . - 0 ID=Thaps31298;Parent=Thaps31298;rank=1 chr1 . exon 2512941 2513435 . - . ID=Thaps31298.1;Parent=Thaps31298;constitutive=1;rank=1 chr1 . repeat_region 2514030 2514047 . ? . description=dust chr1 . repeat_region 2514051 2514106 . + . description=MuDR2_TP chr1 . repeat_region 2514123 2514130 . ? . description=dust chr1 ensembl protein_coding_gene 2520016 2520774 . - . ID=Thaps1827;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS20];external_name=Thaps1827;logic_name=jgi_thaps3 chr1 ensembl transcript 2520016 2520774 . - . ID=Thaps1827;Parent=Thaps1827;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2520016 2520774 . - 0 ID=Thaps1827;Parent=Thaps1827;rank=1 chr1 . exon 2520016 2520774 . - . ID=Thaps1827.1;Parent=Thaps1827;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2517567 2517851 . - . ID=Thaps19631;biotype=protein_coding;description=Calmodulin%2C calmodulin-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS18];external_name=Thaps19631;logic_name=jgi_thaps3 chr1 ensembl transcript 2517567 2517851 . - . ID=Thaps19631;Parent=Thaps19631;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2517567 2517641 . - 0 ID=Thaps19631;Parent=Thaps19631;rank=2 chr1 . exon 2517567 2517641 . - . ID=Thaps19631.2;Parent=Thaps19631;constitutive=1;rank=2 chr1 . CDS 2517723 2517851 . - 0 ID=Thaps19631;Parent=Thaps19631;rank=1 chr1 . exon 2517723 2517851 . - . ID=Thaps19631.1;Parent=Thaps19631;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2519370 2519804 . + . ID=Thaps21014;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS19];external_name=Thaps21014;logic_name=jgi_thaps3 chr1 ensembl transcript 2519370 2519804 . + . ID=Thaps21014;Parent=Thaps21014;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2519370 2519804 . + 0 ID=Thaps21014;Parent=Thaps21014;rank=1 chr1 . exon 2519370 2519804 . + . ID=Thaps21014.1;Parent=Thaps21014;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2523685 2526750 . + . ID=Thaps21016;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS22];external_name=Thaps21016;logic_name=jgi_thaps3 chr1 ensembl transcript 2523685 2526750 . + . ID=Thaps21016;Parent=Thaps21016;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2523685 2524109 . + 0 ID=Thaps21016;Parent=Thaps21016;rank=1 chr1 . exon 2523685 2524109 . + . ID=Thaps21016.1;Parent=Thaps21016;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2524200 2524627 . + 0 ID=Thaps21016;Parent=Thaps21016;rank=2 chr1 . CDS 2524687 2524967 . + 0 ID=Thaps21016;Parent=Thaps21016;rank=3 chr1 . CDS 2525047 2526750 . + 0 ID=Thaps21016;Parent=Thaps21016;rank=4 chr1 ensembl gene 2516960 2517394 . - . ID=Thaps261117;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 2516960 2517394 . - . ID=Thaps261117;Parent=Thaps261117;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 2516960 2517038 . - . ID=Thaps261117.2;Parent=Thaps261117;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 2517124 2517394 . - . ID=Thaps261117.1;Parent=Thaps261117;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2521151 2522956 . - . ID=Thaps31516;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS21];external_name=Thaps31516;logic_name=jgi_thaps3 chr1 ensembl transcript 2521151 2522956 . - . ID=Thaps31516;Parent=Thaps31516;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2521151 2521279 . - 0 ID=Thaps31516;Parent=Thaps31516;rank=3 chr1 . exon 2521151 2521279 . - . ID=Thaps31516.3;Parent=Thaps31516;constitutive=1;rank=3 chr1 . CDS 2521405 2521842 . - 0 ID=Thaps31516;Parent=Thaps31516;rank=2 chr1 . exon 2521405 2521842 . - . ID=Thaps31516.2;Parent=Thaps31516;constitutive=1;rank=2 chr1 . CDS 2521931 2522956 . - 0 ID=Thaps31516;Parent=Thaps31516;rank=1 chr1 . exon 2521931 2522956 . - . ID=Thaps31516.1;Parent=Thaps31516;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2514255 2516524 . - . ID=Thaps39255;biotype=protein_coding;description=Glycyl tRNA synthetase [Source:UniProtKB/TrEMBL%3BAcc:B8BS17];external_name=Thaps39255;logic_name=jgi_thaps3 chr1 ensembl transcript 2514255 2516524 . - . ID=Thaps39255;Parent=Thaps39255;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2514255 2514554 . - 0 ID=Thaps39255;Parent=Thaps39255;rank=3 chr1 . exon 2514255 2514554 . - . ID=Thaps39255.3;Parent=Thaps39255;constitutive=1;rank=3 chr1 . CDS 2514642 2515528 . - 0 ID=Thaps39255;Parent=Thaps39255;rank=2 chr1 . exon 2514642 2515528 . - . ID=Thaps39255.2;Parent=Thaps39255;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2515660 2516524 . - 0 ID=Thaps39255;Parent=Thaps39255;rank=1 chr1 . exon 2515660 2516524 . - . ID=Thaps39255.1;Parent=Thaps39255;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 2529753 2529796 . ? . description=trf chr1 . biological_region 2533891 2533892 0.999 - . logic_name=eponine chr1 . exon 2524200 2524627 . + . ID=Thaps21016.2;Parent=Thaps21016;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 2524687 2524967 . + . ID=Thaps21016.3;Parent=Thaps21016;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 2525047 2526750 . + . ID=Thaps21016.4;Parent=Thaps21016;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2529769 2530277 . + . ID=Thaps268117;biotype=protein_coding;description=Histone H2A [Source:UniProtKB/TrEMBL%3BAcc:B8BS24];external_name=Thaps268117;logic_name=jgi_thaps3 chr1 ensembl transcript 2529769 2530277 . + . ID=Thaps268117;Parent=Thaps268117;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2529769 2529849 . + 0 ID=Thaps268117;Parent=Thaps268117;rank=1 chr1 . exon 2529769 2529849 . + . ID=Thaps268117.1;Parent=Thaps268117;constitutive=1;rank=1 chr1 . CDS 2529966 2530277 . + 0 ID=Thaps268117;Parent=Thaps268117;rank=2 chr1 . exon 2529966 2530277 . + . ID=Thaps268117.2;Parent=Thaps268117;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2531036 2533945 . - . ID=Thaps268118;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS25];external_name=Thaps268118;logic_name=jgi_thaps3 chr1 ensembl transcript 2531036 2533945 . - . ID=Thaps268118;Parent=Thaps268118;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2531036 2532312 . - 0 ID=Thaps268118;Parent=Thaps268118;rank=2 chr1 . exon 2531036 2532312 . - . ID=Thaps268118.2;Parent=Thaps268118;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2533258 2533945 . - 0 ID=Thaps268118;Parent=Thaps268118;rank=1 chr1 . exon 2533258 2533945 . - . ID=Thaps268118.1;Parent=Thaps268118;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2527496 2528695 . - . ID=Thaps31062;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS23];external_name=Thaps31062;logic_name=jgi_thaps3 chr1 ensembl transcript 2527496 2528695 . - . ID=Thaps31062;Parent=Thaps31062;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2527496 2528695 . - 0 ID=Thaps31062;Parent=Thaps31062;rank=1 chr1 . exon 2527496 2528695 . - . ID=Thaps31062.1;Parent=Thaps31062;constitutive=1;rank=1 chr1 . repeat_region 2534636 2534643 . ? . description=dust chr1 . repeat_region 2534691 2534699 . ? . description=dust chr1 ensembl protein_coding_gene 2534777 2535458 . - . ID=Thaps1833;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS26];external_name=Thaps1833;logic_name=jgi_thaps3 chr1 ensembl transcript 2534777 2535458 . - . ID=Thaps1833;Parent=Thaps1833;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2534777 2534992 . - 0 ID=Thaps1833;Parent=Thaps1833;rank=2 chr1 . exon 2534777 2534992 . - . ID=Thaps1833.2;Parent=Thaps1833;constitutive=1;rank=2 chr1 . CDS 2535171 2535458 . - 0 ID=Thaps1833;Parent=Thaps1833;rank=1 chr1 . exon 2535171 2535458 . - . ID=Thaps1833.1;Parent=Thaps1833;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2540497 2542102 . - . ID=Thaps1835;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS28];external_name=Thaps1835;logic_name=jgi_thaps3 chr1 ensembl transcript 2540497 2542102 . - . ID=Thaps1835;Parent=Thaps1835;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2540497 2541301 . - 0 ID=Thaps1835;Parent=Thaps1835;rank=2 chr1 . exon 2540497 2541301 . - . ID=Thaps1835.2;Parent=Thaps1835;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2541396 2542102 . - 0 ID=Thaps1835;Parent=Thaps1835;rank=1 chr1 . exon 2541396 2542102 . - . ID=Thaps1835.1;Parent=Thaps1835;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2537161 2540399 . + . ID=Thaps31145;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS27];external_name=Thaps31145;logic_name=jgi_thaps3 chr1 ensembl transcript 2537161 2540399 . + . ID=Thaps31145;Parent=Thaps31145;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2537161 2537525 . + 0 ID=Thaps31145;Parent=Thaps31145;rank=1 chr1 . exon 2537161 2537525 . + . ID=Thaps31145.1;Parent=Thaps31145;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2537601 2538120 . + 0 ID=Thaps31145;Parent=Thaps31145;rank=2 chr1 . exon 2537601 2538120 . + . ID=Thaps31145.2;Parent=Thaps31145;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2538195 2538834 . + 0 ID=Thaps31145;Parent=Thaps31145;rank=3 chr1 . exon 2538195 2538834 . + . ID=Thaps31145.3;Parent=Thaps31145;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2538901 2539292 . + 0 ID=Thaps31145;Parent=Thaps31145;rank=4 chr1 . exon 2538901 2539292 . + . ID=Thaps31145.4;Parent=Thaps31145;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2539500 2540399 . + 0 ID=Thaps31145;Parent=Thaps31145;rank=5 chr1 . exon 2539500 2540399 . + . ID=Thaps31145.5;Parent=Thaps31145;constitutive=1;rank=5 chr1 . repeat_region 2544993 2545030 . ? . description=trf chr1 . repeat_region 2546827 2546946 . ? . description=trf chr1 ensembl protein_coding_gene 2544860 2545735 . - . ID=Thaps1836;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS29];external_name=Thaps1836;logic_name=jgi_thaps3 chr1 ensembl transcript 2544860 2545735 . - . ID=Thaps1836;Parent=Thaps1836;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2544860 2545735 . - 0 ID=Thaps1836;Parent=Thaps1836;rank=1 chr1 . exon 2544860 2545735 . - . ID=Thaps1836.1;Parent=Thaps1836;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2551451 2554316 . - . ID=Thaps1838;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS31];external_name=Thaps1838;logic_name=jgi_thaps3 chr1 ensembl transcript 2551451 2554316 . - . ID=Thaps1838;Parent=Thaps1838;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2551451 2552142 . - 0 ID=Thaps1838;Parent=Thaps1838;rank=2 chr1 . exon 2551451 2552142 . - . ID=Thaps1838.2;Parent=Thaps1838;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2552600 2554316 . - 0 ID=Thaps1838;Parent=Thaps1838;rank=1 chr1 . exon 2552600 2554316 . - . ID=Thaps1838.1;Parent=Thaps1838;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2548237 2549076 . - . ID=Thaps21020;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS30];external_name=Thaps21020;logic_name=jgi_thaps3 chr1 ensembl transcript 2548237 2549076 . - . ID=Thaps21020;Parent=Thaps21020;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2548237 2549076 . - 0 ID=Thaps21020;Parent=Thaps21020;rank=1 chr1 . exon 2548237 2549076 . - . ID=Thaps21020.1;Parent=Thaps21020;constitutive=1;rank=1 chr1 . repeat_region 2563069 2563083 . ? . description=dust chr1 ensembl protein_coding_gene 2557287 2558712 . + . ID=Thaps1840;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS33];external_name=Thaps1840;logic_name=jgi_thaps3 chr1 ensembl transcript 2557287 2558712 . + . ID=Thaps1840;Parent=Thaps1840;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2557287 2558250 . + 0 ID=Thaps1840;Parent=Thaps1840;rank=1 chr1 . exon 2557287 2558250 . + . ID=Thaps1840.1;Parent=Thaps1840;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2558345 2558712 . + 0 ID=Thaps1840;Parent=Thaps1840;rank=2 chr1 . exon 2558345 2558712 . + . ID=Thaps1840.2;Parent=Thaps1840;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2558996 2559799 . - . ID=Thaps1841;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS34];external_name=Thaps1841;logic_name=jgi_thaps3 chr1 ensembl transcript 2558996 2559799 . - . ID=Thaps1841;Parent=Thaps1841;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2558996 2559799 . - 0 ID=Thaps1841;Parent=Thaps1841;rank=1 chr1 . exon 2558996 2559799 . - . ID=Thaps1841.1;Parent=Thaps1841;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2560296 2561099 . + . ID=Thaps1842;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS35];external_name=Thaps1842;logic_name=jgi_thaps3 chr1 ensembl transcript 2560296 2561099 . + . ID=Thaps1842;Parent=Thaps1842;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2560296 2561099 . + 0 ID=Thaps1842;Parent=Thaps1842;rank=1 chr1 . exon 2560296 2561099 . + . ID=Thaps1842.1;Parent=Thaps1842;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2561286 2562810 . - . ID=Thaps1843;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS36];external_name=Thaps1843;logic_name=jgi_thaps3 chr1 ensembl transcript 2561286 2562810 . - . ID=Thaps1843;Parent=Thaps1843;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2561286 2562194 . - 0 ID=Thaps1843;Parent=Thaps1843;rank=2 chr1 . exon 2561286 2562194 . - . ID=Thaps1843.2;Parent=Thaps1843;constitutive=1;rank=2 chr1 . CDS 2562316 2562810 . - 0 ID=Thaps1843;Parent=Thaps1843;rank=1 chr1 . exon 2562316 2562810 . - . ID=Thaps1843.1;Parent=Thaps1843;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2554865 2556934 . + . ID=Thaps21021;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS32];external_name=Thaps21021;logic_name=jgi_thaps3 chr1 ensembl transcript 2554865 2556934 . + . ID=Thaps21021;Parent=Thaps21021;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2554865 2556683 . + 0 ID=Thaps21021;Parent=Thaps21021;rank=1 chr1 . exon 2554865 2556683 . + . ID=Thaps21021.1;Parent=Thaps21021;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2556807 2556934 . + 0 ID=Thaps21021;Parent=Thaps21021;rank=2 chr1 . exon 2556807 2556934 . + . ID=Thaps21021.2;Parent=Thaps21021;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2563535 2564536 . - . ID=Thaps21022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS37];external_name=Thaps21022;logic_name=jgi_thaps3 chr1 ensembl transcript 2563535 2564536 . - . ID=Thaps21022;Parent=Thaps21022;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2563535 2564536 . - 0 ID=Thaps21022;Parent=Thaps21022;rank=1 chr1 . exon 2563535 2564536 . - . ID=Thaps21022.1;Parent=Thaps21022;constitutive=1;rank=1 chr1 . repeat_region 2567878 2567968 . + . description=TE1A_TP chr1 . repeat_region 2567951 2568201 . + . description=TE1A_TP chr1 ensembl protein_coding_gene 2564963 2566210 . + . ID=Thaps1845;biotype=protein_coding;description=26S proteasome regulatory subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BS38];external_name=RPN9;logic_name=jgi_thaps3 chr1 ensembl transcript 2564963 2566210 . + . ID=Thaps1845;Parent=Thaps1845;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2564963 2565285 . + 0 ID=Thaps1845;Parent=Thaps1845;rank=1 chr1 . exon 2564963 2565285 . + . ID=Thaps1845.1;Parent=Thaps1845;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2565394 2566210 . + 0 ID=Thaps1845;Parent=Thaps1845;rank=2 chr1 . exon 2565394 2566210 . + . ID=Thaps1845.2;Parent=Thaps1845;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 2572574 2574475 . + . ID=Thaps1849;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS41];external_name=Thaps1849;logic_name=jgi_thaps3 chr1 ensembl transcript 2572574 2574475 . + . ID=Thaps1849;Parent=Thaps1849;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2572574 2573972 . + 0 ID=Thaps1849;Parent=Thaps1849;rank=1 chr1 . exon 2572574 2573972 . + . ID=Thaps1849.1;Parent=Thaps1849;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2574069 2574475 . + 0 ID=Thaps1849;Parent=Thaps1849;rank=2 chr1 ensembl protein_coding_gene 2568489 2572333 . + . ID=Thaps261124;biotype=protein_coding;description=Lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme [Source:UniProtKB/TrEMBL%3BAcc:B8BS40];external_name=Thaps261124;logic_name=jgi_thaps3 chr1 ensembl transcript 2568489 2572333 . + . ID=Thaps261124;Parent=Thaps261124;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2568489 2568530 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=1 chr1 . exon 2568489 2568530 . + . ID=Thaps261124.1;Parent=Thaps261124;constitutive=1;rank=1 chr1 . CDS 2568657 2568833 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=2 chr1 . exon 2568657 2568833 . + . ID=Thaps261124.2;Parent=Thaps261124;constitutive=1;rank=2 chr1 . CDS 2568921 2569013 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=3 chr1 . exon 2568921 2569013 . + . ID=Thaps261124.3;Parent=Thaps261124;constitutive=1;rank=3 chr1 . CDS 2569095 2569185 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=4 chr1 . exon 2569095 2569185 . + . ID=Thaps261124.4;Parent=Thaps261124;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 2569256 2569777 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=5 chr1 . exon 2569256 2569777 . + . ID=Thaps261124.5;Parent=Thaps261124;constitutive=1;rank=5 chr1 . CDS 2569870 2569921 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=6 chr1 . exon 2569870 2569921 . + . ID=Thaps261124.6;Parent=Thaps261124;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 2569998 2570289 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=7 chr1 . exon 2569998 2570289 . + . ID=Thaps261124.7;Parent=Thaps261124;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 2570364 2570501 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=8 chr1 . exon 2570364 2570501 . + . ID=Thaps261124.8;Parent=Thaps261124;constitutive=1;rank=8 chr1 . CDS 2570600 2571231 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=9 chr1 . exon 2570600 2571231 . + . ID=Thaps261124.9;Parent=Thaps261124;constitutive=1;ensembl_end_phase=2;rank=9 chr1 . CDS 2571304 2571743 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=10 chr1 . exon 2571304 2571743 . + . ID=Thaps261124.10;Parent=Thaps261124;constitutive=1;ensembl_end_phase=2;rank=10 chr1 . CDS 2571813 2572333 . + 0 ID=Thaps261124;Parent=Thaps261124;rank=11 chr1 . exon 2571813 2572333 . + . ID=Thaps261124.11;Parent=Thaps261124;constitutive=1;ensembl_end_phase=2;rank=11 chr1 ensembl protein_coding_gene 2566333 2567247 . - . ID=Thaps31447;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS39];external_name=Thaps31447;logic_name=jgi_thaps3 chr1 ensembl transcript 2566333 2567247 . - . ID=Thaps31447;Parent=Thaps31447;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2566333 2567247 . - 0 ID=Thaps31447;Parent=Thaps31447;rank=1 chr1 . exon 2566333 2567247 . - . ID=Thaps31447.1;Parent=Thaps31447;constitutive=1;rank=1 chr1 . repeat_region 2576265 2576296 . ? . description=trf chr1 . exon 2574069 2574475 . + . ID=Thaps1849.2;Parent=Thaps1849;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2574701 2576122 . + . ID=Thaps1850;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS42];external_name=Thaps1850;logic_name=jgi_thaps3 chr1 ensembl transcript 2574701 2576122 . + . ID=Thaps1850;Parent=Thaps1850;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2574701 2576122 . + 0 ID=Thaps1850;Parent=Thaps1850;rank=1 chr1 . exon 2574701 2576122 . + . ID=Thaps1850.1;Parent=Thaps1850;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2579254 2580263 . + . ID=Thaps1852;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS44];external_name=Thaps1852;logic_name=jgi_thaps3 chr1 ensembl transcript 2579254 2580263 . + . ID=Thaps1852;Parent=Thaps1852;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2579254 2579322 . + 0 ID=Thaps1852;Parent=Thaps1852;rank=1 chr1 . exon 2579254 2579322 . + . ID=Thaps1852.1;Parent=Thaps1852;constitutive=1;rank=1 chr1 . CDS 2579434 2579967 . + 0 ID=Thaps1852;Parent=Thaps1852;rank=2 chr1 . exon 2579434 2579967 . + . ID=Thaps1852.2;Parent=Thaps1852;constitutive=1;rank=2 chr1 . CDS 2580084 2580263 . + 0 ID=Thaps1852;Parent=Thaps1852;rank=3 chr1 . exon 2580084 2580263 . + . ID=Thaps1852.3;Parent=Thaps1852;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 2576242 2578582 . - . ID=Thaps21025;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS43];external_name=Thaps21025;logic_name=jgi_thaps3 chr1 ensembl transcript 2576242 2578582 . - . ID=Thaps21025;Parent=Thaps21025;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2576242 2577080 . - 0 ID=Thaps21025;Parent=Thaps21025;rank=3 chr1 . exon 2576242 2577080 . - . ID=Thaps21025.3;Parent=Thaps21025;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2577160 2577310 . - 0 ID=Thaps21025;Parent=Thaps21025;rank=2 chr1 . exon 2577160 2577310 . - . ID=Thaps21025.2;Parent=Thaps21025;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2577410 2578582 . - 0 ID=Thaps21025;Parent=Thaps21025;rank=1 chr1 . exon 2577410 2578582 . - . ID=Thaps21025.1;Parent=Thaps21025;constitutive=1;rank=1 chr1 . repeat_region 2585549 2585571 . ? . description=dust chr1 . repeat_region 2586027 2586054 . ? . description=dust chr1 . repeat_region 2587033 2587074 . ? . description=dust chr1 . repeat_region 2589871 2589905 . ? . description=dust chr1 ensembl protein_coding_gene 2587697 2589262 . + . ID=Thaps1855;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS46];external_name=Thaps1855;logic_name=jgi_thaps3 chr1 ensembl transcript 2587697 2589262 . + . ID=Thaps1855;Parent=Thaps1855;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2587697 2589262 . + 0 ID=Thaps1855;Parent=Thaps1855;rank=1 chr1 . exon 2587697 2589262 . + . ID=Thaps1855.1;Parent=Thaps1855;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2589324 2590694 . - . ID=Thaps1856;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS47];external_name=Thaps1856;logic_name=jgi_thaps3 chr1 ensembl transcript 2589324 2590694 . - . ID=Thaps1856;Parent=Thaps1856;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2589324 2590694 . - 0 ID=Thaps1856;Parent=Thaps1856;rank=1 chr1 . exon 2589324 2590694 . - . ID=Thaps1856.1;Parent=Thaps1856;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2591033 2592076 . + . ID=Thaps1857;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS48];external_name=Thaps1857;logic_name=jgi_thaps3 chr1 ensembl transcript 2591033 2592076 . + . ID=Thaps1857;Parent=Thaps1857;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2591033 2592076 . + 0 ID=Thaps1857;Parent=Thaps1857;rank=1 chr1 . exon 2591033 2592076 . + . ID=Thaps1857.1;Parent=Thaps1857;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2584999 2587293 . - . ID=Thaps21026;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS45];external_name=Thaps21026;logic_name=jgi_thaps3 chr1 ensembl transcript 2584999 2587293 . - . ID=Thaps21026;Parent=Thaps21026;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2584999 2587293 . - 0 ID=Thaps21026;Parent=Thaps21026;rank=1 chr1 . exon 2584999 2587293 . - . ID=Thaps21026.1;Parent=Thaps21026;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2593542 2595022 . + . ID=Thaps261126;biotype=protein_coding;description=D-amino acid dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BS49];external_name=Thaps261126;logic_name=jgi_thaps3 chr1 ensembl transcript 2593542 2595022 . + . ID=Thaps261126;Parent=Thaps261126;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2593542 2593728 . + 0 ID=Thaps261126;Parent=Thaps261126;rank=1 chr1 . exon 2593542 2593728 . + . ID=Thaps261126.1;Parent=Thaps261126;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2593800 2593945 . + 0 ID=Thaps261126;Parent=Thaps261126;rank=2 chr1 . CDS 2593976 2594221 . + 0 ID=Thaps261126;Parent=Thaps261126;rank=3 chr1 . CDS 2594264 2594468 . + 0 ID=Thaps261126;Parent=Thaps261126;rank=4 chr1 . CDS 2594553 2594760 . + 0 ID=Thaps261126;Parent=Thaps261126;rank=5 chr1 . CDS 2594830 2595022 . + 0 ID=Thaps261126;Parent=Thaps261126;rank=6 chr1 . repeat_region 2601430 2601462 . ? . description=trf chr1 ensembl protein_coding_gene 2602638 2603424 . - . ID=Thaps1861;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS52];external_name=Thaps1861;logic_name=jgi_thaps3 chr1 ensembl transcript 2602638 2603424 . - . ID=Thaps1861;Parent=Thaps1861;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2602638 2603121 . - 0 ID=Thaps1861;Parent=Thaps1861;rank=2 chr1 . exon 2602638 2603121 . - . ID=Thaps1861.2;Parent=Thaps1861;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2603192 2603424 . - 0 ID=Thaps1861;Parent=Thaps1861;rank=1 chr1 . exon 2603192 2603424 . - . ID=Thaps1861.1;Parent=Thaps1861;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2595146 2600634 . - . ID=Thaps21027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS50];external_name=Thaps21027;logic_name=jgi_thaps3 chr1 ensembl transcript 2595146 2600634 . - . ID=Thaps21027;Parent=Thaps21027;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2595146 2596514 . - 0 ID=Thaps21027;Parent=Thaps21027;rank=4 chr1 . exon 2595146 2596514 . - . ID=Thaps21027.4;Parent=Thaps21027;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 2596563 2599368 . - 0 ID=Thaps21027;Parent=Thaps21027;rank=3 chr1 . exon 2596563 2599368 . - . ID=Thaps21027.3;Parent=Thaps21027;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2599483 2599895 . - 0 ID=Thaps21027;Parent=Thaps21027;rank=2 chr1 . exon 2599483 2599895 . - . ID=Thaps21027.2;Parent=Thaps21027;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2600219 2600634 . - 0 ID=Thaps21027;Parent=Thaps21027;rank=1 chr1 . exon 2600219 2600634 . - . ID=Thaps21027.1;Parent=Thaps21027;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . exon 2593800 2593945 . + . ID=Thaps261126.2;Parent=Thaps261126;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 2593976 2594221 . + . ID=Thaps261126.3;Parent=Thaps261126;constitutive=1;rank=3 chr1 . exon 2594264 2594468 . + . ID=Thaps261126.4;Parent=Thaps261126;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . exon 2594553 2594760 . + . ID=Thaps261126.5;Parent=Thaps261126;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . exon 2594830 2595022 . + . ID=Thaps261126.6;Parent=Thaps261126;constitutive=1;ensembl_end_phase=1;rank=6 chr1 ensembl protein_coding_gene 2600846 2602449 . + . ID=Thaps31014;biotype=protein_coding;description=Mu subunit of AP4-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS51];external_name=Thaps31014;logic_name=jgi_thaps3 chr1 ensembl transcript 2600846 2602449 . + . ID=Thaps31014;Parent=Thaps31014;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2600846 2600983 . + 0 ID=Thaps31014;Parent=Thaps31014;rank=1 chr1 . exon 2600846 2600983 . + . ID=Thaps31014.1;Parent=Thaps31014;constitutive=1;rank=1 chr1 . CDS 2601137 2601259 . + 0 ID=Thaps31014;Parent=Thaps31014;rank=2 chr1 . exon 2601137 2601259 . + . ID=Thaps31014.2;Parent=Thaps31014;constitutive=1;rank=2 chr1 . CDS 2601352 2602449 . + 0 ID=Thaps31014;Parent=Thaps31014;rank=3 chr1 . exon 2601352 2602449 . + . ID=Thaps31014.3;Parent=Thaps31014;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 2604867 2608466 . - . ID=Thaps1863;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS54];external_name=Thaps1863;logic_name=jgi_thaps3 chr1 ensembl transcript 2604867 2608466 . - . ID=Thaps1863;Parent=Thaps1863;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2604867 2604965 . - 0 ID=Thaps1863;Parent=Thaps1863;rank=6 chr1 . exon 2604867 2604965 . - . ID=Thaps1863.6;Parent=Thaps1863;constitutive=1;rank=6 chr1 . CDS 2605250 2605309 . - 0 ID=Thaps1863;Parent=Thaps1863;rank=5 chr1 . exon 2605250 2605309 . - . ID=Thaps1863.5;Parent=Thaps1863;constitutive=1;rank=5 chr1 . CDS 2605404 2605868 . - 0 ID=Thaps1863;Parent=Thaps1863;rank=4 chr1 . exon 2605404 2605868 . - . ID=Thaps1863.4;Parent=Thaps1863;constitutive=1;rank=4 chr1 . CDS 2605946 2606427 . - 0 ID=Thaps1863;Parent=Thaps1863;rank=3 chr1 . exon 2605946 2606427 . - . ID=Thaps1863.3;Parent=Thaps1863;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2606619 2607566 . - 0 ID=Thaps1863;Parent=Thaps1863;rank=2 chr1 . exon 2606619 2607566 . - . ID=Thaps1863.2;Parent=Thaps1863;constitutive=1;rank=2 chr1 . CDS 2607638 2608466 . - 0 ID=Thaps1863;Parent=Thaps1863;rank=1 chr1 . exon 2607638 2608466 . - . ID=Thaps1863.1;Parent=Thaps1863;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2610844 2611245 . - . ID=Thaps19541;biotype=protein_coding;description=RL28%2C ribosomal protein 28 60S large ribosomal subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BS56];external_name=RL28;logic_name=jgi_thaps3 chr1 ensembl transcript 2610844 2611245 . - . ID=Thaps19541;Parent=Thaps19541;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2610844 2611245 . - 0 ID=Thaps19541;Parent=Thaps19541;rank=1 chr1 . exon 2610844 2611245 . - . ID=Thaps19541.1;Parent=Thaps19541;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2613493 2614416 . + . ID=Thaps21033;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS58];external_name=Thaps21033;logic_name=jgi_thaps3 chr1 ensembl transcript 2613493 2614416 . + . ID=Thaps21033;Parent=Thaps21033;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2613493 2614416 . + 0 ID=Thaps21033;Parent=Thaps21033;rank=1 chr1 . exon 2613493 2614416 . + . ID=Thaps21033.1;Parent=Thaps21033;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2603887 2604633 . + . ID=Thaps31438;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS53];external_name=Thaps31438;logic_name=jgi_thaps3 chr1 ensembl transcript 2603887 2604633 . + . ID=Thaps31438;Parent=Thaps31438;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2603887 2604633 . + 0 ID=Thaps31438;Parent=Thaps31438;rank=1 chr1 . exon 2603887 2604633 . + . ID=Thaps31438.1;Parent=Thaps31438;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2608966 2609734 . + . ID=Thaps39278;biotype=protein_coding;description=V-type h-atpase subunit [Source:UniProtKB/TrEMBL%3BAcc:B8BS55];external_name=Thaps39278;logic_name=jgi_thaps3 chr1 ensembl transcript 2608966 2609734 . + . ID=Thaps39278;Parent=Thaps39278;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2608966 2609177 . + 0 ID=Thaps39278;Parent=Thaps39278;rank=1 chr1 . exon 2608966 2609177 . + . ID=Thaps39278.1;Parent=Thaps39278;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2609371 2609734 . + 0 ID=Thaps39278;Parent=Thaps39278;rank=2 chr1 . exon 2609371 2609734 . + . ID=Thaps39278.2;Parent=Thaps39278;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 2612029 2612646 . + . ID=Thaps39282;biotype=protein_coding;description=Ribosomal protein L15 [Source:UniProtKB/TrEMBL%3BAcc:B8BS57];external_name=RL15;logic_name=jgi_thaps3 chr1 ensembl transcript 2612029 2612646 . + . ID=Thaps39282;Parent=Thaps39282;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2612029 2612646 . + 0 ID=Thaps39282;Parent=Thaps39282;rank=1 chr1 . exon 2612029 2612646 . + . ID=Thaps39282.1;Parent=Thaps39282;constitutive=1;rank=1 chr1 . repeat_region 2616509 2616550 . ? . description=trf chr1 ensembl protein_coding_gene 2615069 2615857 . - . ID=Thaps1869;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS59];external_name=Thaps1869;logic_name=jgi_thaps3 chr1 ensembl transcript 2615069 2615857 . - . ID=Thaps1869;Parent=Thaps1869;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2615069 2615857 . - 0 ID=Thaps1869;Parent=Thaps1869;rank=1 chr1 . exon 2615069 2615857 . - . ID=Thaps1869.1;Parent=Thaps1869;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2618371 2622850 . + . ID=Thaps1870;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS60];external_name=Thaps1870;logic_name=jgi_thaps3 chr1 ensembl transcript 2618371 2622850 . + . ID=Thaps1870;Parent=Thaps1870;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2618371 2621386 . + 0 ID=Thaps1870;Parent=Thaps1870;rank=1 chr1 . exon 2618371 2621386 . + . ID=Thaps1870.1;Parent=Thaps1870;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2621465 2621623 . + 0 ID=Thaps1870;Parent=Thaps1870;rank=2 chr1 . exon 2621465 2621623 . + . ID=Thaps1870.2;Parent=Thaps1870;constitutive=1;rank=2 chr1 . CDS 2621800 2621810 . + 0 ID=Thaps1870;Parent=Thaps1870;rank=3 chr1 . exon 2621800 2621810 . + . ID=Thaps1870.3;Parent=Thaps1870;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2621946 2622062 . + 0 ID=Thaps1870;Parent=Thaps1870;rank=4 chr1 . exon 2621946 2622062 . + . ID=Thaps1870.4;Parent=Thaps1870;constitutive=1;rank=4 chr1 . CDS 2622149 2622850 . + 0 ID=Thaps1870;Parent=Thaps1870;rank=5 chr1 . exon 2622149 2622850 . + . ID=Thaps1870.5;Parent=Thaps1870;constitutive=1;rank=5 chr1 ensembl protein_coding_gene 2623031 2623743 . - . ID=Thaps1871;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS61];external_name=Thaps1871;logic_name=jgi_thaps3 chr1 ensembl transcript 2623031 2623743 . - . ID=Thaps1871;Parent=Thaps1871;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2623031 2623507 . - 0 ID=Thaps1871;Parent=Thaps1871;rank=2 chr1 . exon 2623031 2623507 . - . ID=Thaps1871.2;Parent=Thaps1871;constitutive=1;rank=2 chr1 . CDS 2623639 2623743 . - 0 ID=Thaps1871;Parent=Thaps1871;rank=1 chr1 . exon 2623639 2623743 . - . ID=Thaps1871.1;Parent=Thaps1871;constitutive=1;rank=1 chr1 . repeat_region 2626875 2626907 . ? . description=dust chr1 . repeat_region 2629556 2629574 . ? . description=dust chr1 ensembl protein_coding_gene 2626621 2629118 . + . ID=Thaps1873;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS63];external_name=Thaps1873;logic_name=jgi_thaps3 chr1 ensembl transcript 2626621 2629118 . + . ID=Thaps1873;Parent=Thaps1873;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2626621 2626900 . + 0 ID=Thaps1873;Parent=Thaps1873;rank=1 chr1 . exon 2626621 2626900 . + . ID=Thaps1873.1;Parent=Thaps1873;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2626943 2628956 . + 0 ID=Thaps1873;Parent=Thaps1873;rank=2 chr1 . exon 2626943 2628956 . + . ID=Thaps1873.2;Parent=Thaps1873;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2629037 2629118 . + 0 ID=Thaps1873;Parent=Thaps1873;rank=3 chr1 . exon 2629037 2629118 . + . ID=Thaps1873.3;Parent=Thaps1873;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 2632278 2633306 . + . ID=Thaps1875;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS65];external_name=Thaps1875;logic_name=jgi_thaps3 chr1 ensembl transcript 2632278 2633306 . + . ID=Thaps1875;Parent=Thaps1875;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2632278 2632410 . + 0 ID=Thaps1875;Parent=Thaps1875;rank=1 chr1 . exon 2632278 2632410 . + . ID=Thaps1875.1;Parent=Thaps1875;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2632498 2633306 . + 0 ID=Thaps1875;Parent=Thaps1875;rank=2 chr1 . exon 2632498 2633306 . + . ID=Thaps1875.2;Parent=Thaps1875;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2630161 2631941 . + . ID=Thaps261132;biotype=protein_coding;description=Phospholipid:diacylglycerol acyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BS64];external_name=PDT1;logic_name=jgi_thaps3 chr1 ensembl transcript 2630161 2631941 . + . ID=Thaps261132;Parent=Thaps261132;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2630161 2630183 . + 0 ID=Thaps261132;Parent=Thaps261132;rank=1 chr1 . exon 2630161 2630183 . + . ID=Thaps261132.1;Parent=Thaps261132;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2630286 2631075 . + 0 ID=Thaps261132;Parent=Thaps261132;rank=2 chr1 . exon 2630286 2631075 . + . ID=Thaps261132.2;Parent=Thaps261132;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2631235 2631545 . + 0 ID=Thaps261132;Parent=Thaps261132;rank=3 chr1 . exon 2631235 2631545 . + . ID=Thaps261132.3;Parent=Thaps261132;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2631663 2631941 . + 0 ID=Thaps261132;Parent=Thaps261132;rank=4 chr1 . exon 2631663 2631941 . + . ID=Thaps261132.4;Parent=Thaps261132;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2624753 2626237 . - . ID=Thaps268124;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS62];external_name=Thaps268124;logic_name=jgi_thaps3 chr1 ensembl transcript 2624753 2626237 . - . ID=Thaps268124;Parent=Thaps268124;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2624753 2625538 . - 0 ID=Thaps268124;Parent=Thaps268124;rank=2 chr1 . exon 2624753 2625538 . - . ID=Thaps268124.2;Parent=Thaps268124;constitutive=1;rank=2 chr1 . CDS 2625584 2626237 . - 0 ID=Thaps268124;Parent=Thaps268124;rank=1 chr1 . exon 2625584 2626237 . - . ID=Thaps268124.1;Parent=Thaps268124;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2641310 2642083 . - . ID=Thaps17349;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS69];external_name=Thaps17349;logic_name=jgi_thaps3 chr1 ensembl transcript 2641310 2642083 . - . ID=Thaps17349;Parent=Thaps17349;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2641310 2642083 . - 0 ID=Thaps17349;Parent=Thaps17349;rank=1 chr1 . exon 2641310 2642083 . - . ID=Thaps17349.1;Parent=Thaps17349;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2637668 2638577 . + . ID=Thaps268127;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein 8 [Source:UniProtKB/TrEMBL%3BAcc:B8BS67];external_name=LHCF9;logic_name=jgi_thaps3 chr1 ensembl transcript 2637668 2638577 . + . ID=Thaps268127;Parent=Thaps268127;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2637668 2637669 . + 0 ID=Thaps268127;Parent=Thaps268127;rank=1 chr1 . exon 2637668 2637669 . + . ID=Thaps268127.1;Parent=Thaps268127;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2637855 2637966 . + 0 ID=Thaps268127;Parent=Thaps268127;rank=2 chr1 . exon 2637855 2637966 . + . ID=Thaps268127.2;Parent=Thaps268127;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2638059 2638577 . + 0 ID=Thaps268127;Parent=Thaps268127;rank=3 chr1 . exon 2638059 2638577 . + . ID=Thaps268127.3;Parent=Thaps268127;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 2639190 2640362 . - . ID=Thaps31566;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS68];external_name=Thaps31566;logic_name=jgi_thaps3 chr1 ensembl transcript 2639190 2640362 . - . ID=Thaps31566;Parent=Thaps31566;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2639190 2640362 . - 0 ID=Thaps31566;Parent=Thaps31566;rank=1 chr1 . exon 2639190 2640362 . - . ID=Thaps31566.1;Parent=Thaps31566;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2633853 2636230 . + . ID=Thaps39286;biotype=protein_coding;description=ABC transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BS66];external_name=Thaps39286;logic_name=jgi_thaps3 chr1 ensembl transcript 2633853 2636230 . + . ID=Thaps39286;Parent=Thaps39286;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2633853 2633991 . + 0 ID=Thaps39286;Parent=Thaps39286;rank=1 chr1 . exon 2633853 2633991 . + . ID=Thaps39286.1;Parent=Thaps39286;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2634101 2634528 . + 0 ID=Thaps39286;Parent=Thaps39286;rank=2 chr1 . exon 2634101 2634528 . + . ID=Thaps39286.2;Parent=Thaps39286;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2634629 2635425 . + 0 ID=Thaps39286;Parent=Thaps39286;rank=3 chr1 . exon 2634629 2635425 . + . ID=Thaps39286.3;Parent=Thaps39286;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2635507 2636230 . + 0 ID=Thaps39286;Parent=Thaps39286;rank=4 chr1 . exon 2635507 2636230 . + . ID=Thaps39286.4;Parent=Thaps39286;constitutive=1;ensembl_end_phase=1;rank=4 chr1 ensembl protein_coding_gene 2643715 2644833 . - . ID=Thaps1880;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS70];external_name=Thaps1880;logic_name=jgi_thaps3 chr1 ensembl transcript 2643715 2644833 . - . ID=Thaps1880;Parent=Thaps1880;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2643715 2644275 . - 0 ID=Thaps1880;Parent=Thaps1880;rank=2 chr1 . exon 2643715 2644275 . - . ID=Thaps1880.2;Parent=Thaps1880;constitutive=1;rank=2 chr1 . CDS 2644450 2644833 . - 0 ID=Thaps1880;Parent=Thaps1880;rank=1 chr1 . exon 2644450 2644833 . - . ID=Thaps1880.1;Parent=Thaps1880;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2649685 2651973 . - . ID=Thaps1882;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS72];external_name=Thaps1882;logic_name=jgi_thaps3 chr1 ensembl transcript 2649685 2651973 . - . ID=Thaps1882;Parent=Thaps1882;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2649685 2651973 . - 0 ID=Thaps1882;Parent=Thaps1882;rank=1 chr1 . exon 2649685 2651973 . - . ID=Thaps1882.1;Parent=Thaps1882;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2646185 2649018 . - . ID=Thaps21039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS71];external_name=Thaps21039;logic_name=jgi_thaps3 chr1 ensembl transcript 2646185 2649018 . - . ID=Thaps21039;Parent=Thaps21039;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2646185 2648893 . - 0 ID=Thaps21039;Parent=Thaps21039;rank=2 chr1 . exon 2646185 2648893 . - . ID=Thaps21039.2;Parent=Thaps21039;constitutive=1;rank=2 chr1 . CDS 2648974 2649018 . - 0 ID=Thaps21039;Parent=Thaps21039;rank=1 chr1 . exon 2648974 2649018 . - . ID=Thaps21039.1;Parent=Thaps21039;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2652126 2654305 . + . ID=Thaps21040;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS73];external_name=Thaps21040;logic_name=jgi_thaps3 chr1 ensembl transcript 2652126 2654305 . + . ID=Thaps21040;Parent=Thaps21040;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2652126 2652270 . + 0 ID=Thaps21040;Parent=Thaps21040;rank=1 chr1 . exon 2652126 2652270 . + . ID=Thaps21040.1;Parent=Thaps21040;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2652352 2652647 . + 0 ID=Thaps21040;Parent=Thaps21040;rank=2 chr1 . exon 2652352 2652647 . + . ID=Thaps21040.2;Parent=Thaps21040;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2652685 2652849 . + 0 ID=Thaps21040;Parent=Thaps21040;rank=3 chr1 . exon 2652685 2652849 . + . ID=Thaps21040.3;Parent=Thaps21040;constitutive=1;rank=3 chr1 . CDS 2652953 2654305 . + 0 ID=Thaps21040;Parent=Thaps21040;rank=4 chr1 . exon 2652953 2654305 . + . ID=Thaps21040.4;Parent=Thaps21040;constitutive=1;rank=4 chr1 . repeat_region 2655964 2656018 . ? . description=trf chr1 . repeat_region 2660311 2660333 . ? . description=trf chr1 . repeat_region 2660311 2660333 . ? . description=dust chr1 ensembl protein_coding_gene 2658072 2659109 . - . ID=Thaps15226;biotype=protein_coding;description=Mevalonate disphosphate decarboxylase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS75];external_name=Thaps15226;logic_name=jgi_thaps3 chr1 ensembl transcript 2658072 2659109 . - . ID=Thaps15226;Parent=Thaps15226;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2658072 2659109 . - 0 ID=Thaps15226;Parent=Thaps15226;rank=1 chr1 . exon 2658072 2659109 . - . ID=Thaps15226.1;Parent=Thaps15226;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2654460 2656451 . - . ID=Thaps1884;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS74];external_name=Thaps1884;logic_name=jgi_thaps3 chr1 ensembl transcript 2654460 2656451 . - . ID=Thaps1884;Parent=Thaps1884;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2654460 2656451 . - 0 ID=Thaps1884;Parent=Thaps1884;rank=1 chr1 . exon 2654460 2656451 . - . ID=Thaps1884.1;Parent=Thaps1884;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2659471 2660889 . + . ID=Thaps21042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS76];external_name=Thaps21042;logic_name=jgi_thaps3 chr1 ensembl transcript 2659471 2660889 . + . ID=Thaps21042;Parent=Thaps21042;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2659471 2660889 . + 0 ID=Thaps21042;Parent=Thaps21042;rank=1 chr1 . exon 2659471 2660889 . + . ID=Thaps21042.1;Parent=Thaps21042;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2661092 2664858 . - . ID=Thaps21043;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS77];external_name=Thaps21043;logic_name=jgi_thaps3 chr1 ensembl transcript 2661092 2664858 . - . ID=Thaps21043;Parent=Thaps21043;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2661092 2662159 . - 0 ID=Thaps21043;Parent=Thaps21043;rank=3 chr1 . exon 2661092 2662159 . - . ID=Thaps21043.3;Parent=Thaps21043;constitutive=1;rank=3 chr1 . CDS 2662253 2663497 . - 0 ID=Thaps21043;Parent=Thaps21043;rank=2 chr1 . exon 2662253 2663497 . - . ID=Thaps21043.2;Parent=Thaps21043;constitutive=1;rank=2 chr1 . CDS 2663551 2664858 . - 0 ID=Thaps21043;Parent=Thaps21043;rank=1 chr1 . exon 2663551 2664858 . - . ID=Thaps21043.1;Parent=Thaps21043;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2665471 2666445 . - . ID=Thaps1888;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS78];external_name=Thaps1888;logic_name=jgi_thaps3 chr1 ensembl transcript 2665471 2666445 . - . ID=Thaps1888;Parent=Thaps1888;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2665471 2666445 . - 0 ID=Thaps1888;Parent=Thaps1888;rank=1 chr1 . exon 2665471 2666445 . - . ID=Thaps1888.1;Parent=Thaps1888;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2666602 2667707 . + . ID=Thaps1889;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS79];external_name=Thaps1889;logic_name=jgi_thaps3 chr1 ensembl transcript 2666602 2667707 . + . ID=Thaps1889;Parent=Thaps1889;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2666602 2667090 . + 0 ID=Thaps1889;Parent=Thaps1889;rank=1 chr1 . exon 2666602 2667090 . + . ID=Thaps1889.1;Parent=Thaps1889;constitutive=1;rank=1 chr1 . CDS 2667378 2667707 . + 0 ID=Thaps1889;Parent=Thaps1889;rank=2 chr1 . exon 2667378 2667707 . + . ID=Thaps1889.2;Parent=Thaps1889;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2668439 2670394 . + . ID=Thaps21044;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS80];external_name=Thaps21044;logic_name=jgi_thaps3 chr1 ensembl transcript 2668439 2670394 . + . ID=Thaps21044;Parent=Thaps21044;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2668439 2670394 . + 0 ID=Thaps21044;Parent=Thaps21044;rank=1 chr1 . exon 2668439 2670394 . + . ID=Thaps21044.1;Parent=Thaps21044;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2670899 2671643 . - . ID=Thaps21045;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS81];external_name=Thaps21045;logic_name=jgi_thaps3 chr1 ensembl transcript 2670899 2671643 . - . ID=Thaps21045;Parent=Thaps21045;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2670899 2671027 . - 0 ID=Thaps21045;Parent=Thaps21045;rank=2 chr1 . exon 2670899 2671027 . - . ID=Thaps21045.2;Parent=Thaps21045;constitutive=1;rank=2 chr1 . CDS 2671149 2671643 . - 0 ID=Thaps21045;Parent=Thaps21045;rank=1 chr1 . exon 2671149 2671643 . - . ID=Thaps21045.1;Parent=Thaps21045;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2672062 2674062 . + . ID=Thaps21046;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS82];external_name=Thaps21046;logic_name=jgi_thaps3 chr1 ensembl transcript 2672062 2674062 . + . ID=Thaps21046;Parent=Thaps21046;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2672062 2674062 . + 0 ID=Thaps21046;Parent=Thaps21046;rank=1 chr1 . exon 2672062 2674062 . + . ID=Thaps21046.1;Parent=Thaps21046;constitutive=1;rank=1 chr1 . repeat_region 2674652 2674833 . ? . description=trf chr1 . repeat_region 2675229 2675278 . ? . description=dust chr1 . repeat_region 2676189 2676211 . ? . description=dust chr1 . repeat_region 2680021 2680046 . ? . description=dust chr1 ensembl tRNA_gene 2679908 2679997 . + . ID=EPrTPOG00000000110;biotype=tRNA;description=tRNA-Val for anticodon AAC [Source:TRNASCAN_SE%3BAcc:tRNA-Val];external_name=tRNA-Val;logic_name=ncrna_eg chr1 ensembl transcript 2679908 2679997 . + . ID=EPrTPOT00000000110;Parent=EPrTPOG00000000110;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 2679908 2679997 . + . ID=EPrTPOE00000000110;Parent=EPrTPOT00000000110;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2682474 2682953 . - . ID=Thaps1896;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS85];external_name=Thaps1896;logic_name=jgi_thaps3 chr1 ensembl transcript 2682474 2682953 . - . ID=Thaps1896;Parent=Thaps1896;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2682474 2682953 . - 0 ID=Thaps1896;Parent=Thaps1896;rank=1 chr1 . exon 2682474 2682953 . - . ID=Thaps1896.1;Parent=Thaps1896;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2683392 2684159 . - . ID=Thaps261140;biotype=protein_coding;description=UDP-galactose:N-acetylgalactosamine-alpha-R beta 1%2C3-galactosyltransferase [Source:UniProtKB/TrEMBL%3BAcc:B8BS86];external_name=Thaps261140;logic_name=jgi_thaps3 chr1 ensembl transcript 2683392 2684159 . - . ID=Thaps261140;Parent=Thaps261140;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2683392 2684159 . - 0 ID=Thaps261140;Parent=Thaps261140;rank=1 chr1 . exon 2683392 2684159 . - . ID=Thaps261140.1;Parent=Thaps261140;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2676383 2679000 . + . ID=Thaps268130;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS83];external_name=Thaps268130;logic_name=jgi_thaps3 chr1 ensembl transcript 2676383 2679000 . + . ID=Thaps268130;Parent=Thaps268130;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2676383 2676761 . + 0 ID=Thaps268130;Parent=Thaps268130;rank=1 chr1 . exon 2676383 2676761 . + . ID=Thaps268130.1;Parent=Thaps268130;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2676894 2677028 . + 0 ID=Thaps268130;Parent=Thaps268130;rank=2 chr1 . exon 2676894 2677028 . + . ID=Thaps268130.2;Parent=Thaps268130;constitutive=1;rank=2 chr1 . CDS 2677137 2678306 . + 0 ID=Thaps268130;Parent=Thaps268130;rank=3 chr1 . exon 2677137 2678306 . + . ID=Thaps268130.3;Parent=Thaps268130;constitutive=1;rank=3 chr1 . CDS 2678424 2678596 . + 0 ID=Thaps268130;Parent=Thaps268130;rank=4 chr1 . exon 2678424 2678596 . + . ID=Thaps268130.4;Parent=Thaps268130;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2678674 2679000 . + 0 ID=Thaps268130;Parent=Thaps268130;rank=5 chr1 . exon 2678674 2679000 . + . ID=Thaps268130.5;Parent=Thaps268130;constitutive=1;rank=5 chr1 ensembl protein_coding_gene 2680740 2681849 . + . ID=Thaps39299;biotype=protein_coding;description=Adp-ribosylation factor [Source:UniProtKB/TrEMBL%3BAcc:B8BS84];external_name=ARF3;logic_name=jgi_thaps3 chr1 ensembl transcript 2680740 2681849 . + . ID=Thaps39299;Parent=Thaps39299;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2680740 2680775 . + 0 ID=Thaps39299;Parent=Thaps39299;rank=1 chr1 . exon 2680740 2680775 . + . ID=Thaps39299.1;Parent=Thaps39299;constitutive=1;rank=1 chr1 . CDS 2681334 2681849 . + 0 ID=Thaps39299;Parent=Thaps39299;rank=2 chr1 . exon 2681334 2681849 . + . ID=Thaps39299.2;Parent=Thaps39299;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2687549 2688250 . - . ID=Thaps1899;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS88];external_name=Thaps1899;logic_name=jgi_thaps3 chr1 ensembl transcript 2687549 2688250 . - . ID=Thaps1899;Parent=Thaps1899;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2687549 2688250 . - 0 ID=Thaps1899;Parent=Thaps1899;rank=1 chr1 . exon 2687549 2688250 . - . ID=Thaps1899.1;Parent=Thaps1899;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2688632 2690773 . + . ID=Thaps1900;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS89];external_name=Thaps1900;logic_name=jgi_thaps3 chr1 ensembl transcript 2688632 2690773 . + . ID=Thaps1900;Parent=Thaps1900;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2688632 2690773 . + 0 ID=Thaps1900;Parent=Thaps1900;rank=1 chr1 . exon 2688632 2690773 . + . ID=Thaps1900.1;Parent=Thaps1900;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2685726 2687309 . + . ID=Thaps21050;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS87];external_name=Thaps21050;logic_name=jgi_thaps3 chr1 ensembl transcript 2685726 2687309 . + . ID=Thaps21050;Parent=Thaps21050;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2685726 2686311 . + 0 ID=Thaps21050;Parent=Thaps21050;rank=1 chr1 . exon 2685726 2686311 . + . ID=Thaps21050.1;Parent=Thaps21050;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2686397 2686450 . + 0 ID=Thaps21050;Parent=Thaps21050;rank=2 chr1 . exon 2686397 2686450 . + . ID=Thaps21050.2;Parent=Thaps21050;constitutive=1;rank=2 chr1 . CDS 2686474 2687309 . + 0 ID=Thaps21050;Parent=Thaps21050;rank=3 chr1 . exon 2686474 2687309 . + . ID=Thaps21050.3;Parent=Thaps21050;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2690996 2692185 . - . ID=Thaps261141;biotype=protein_coding;description=26S proteasome regulatory particle chain rpt6-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS90];external_name=Thaps261141;logic_name=jgi_thaps3 chr1 ensembl transcript 2690996 2692185 . - . ID=Thaps261141;Parent=Thaps261141;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2690996 2691071 . - 0 ID=Thaps261141;Parent=Thaps261141;rank=4 chr1 . exon 2690996 2691071 . - . ID=Thaps261141.4;Parent=Thaps261141;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 2691315 2691596 . - 0 ID=Thaps261141;Parent=Thaps261141;rank=3 chr1 . exon 2691315 2691596 . - . ID=Thaps261141.3;Parent=Thaps261141;constitutive=1;rank=3 chr1 . CDS 2691627 2691899 . - 0 ID=Thaps261141;Parent=Thaps261141;rank=2 chr1 . exon 2691627 2691899 . - . ID=Thaps261141.2;Parent=Thaps261141;constitutive=1;rank=2 chr1 . CDS 2692005 2692185 . - 0 ID=Thaps261141;Parent=Thaps261141;rank=1 chr1 . exon 2692005 2692185 . - . ID=Thaps261141.1;Parent=Thaps261141;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 2699760 2699806 . ? . description=dust chr1 ensembl protein_coding_gene 2695782 2696819 . + . ID=Thaps1903;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS92];external_name=Thaps1903;logic_name=jgi_thaps3 chr1 ensembl transcript 2695782 2696819 . + . ID=Thaps1903;Parent=Thaps1903;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2695782 2696819 . + 0 ID=Thaps1903;Parent=Thaps1903;rank=1 chr1 . exon 2695782 2696819 . + . ID=Thaps1903.1;Parent=Thaps1903;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2696866 2699842 . - . ID=Thaps1904;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS93];external_name=Thaps1904;logic_name=jgi_thaps3 chr1 ensembl transcript 2696866 2699842 . - . ID=Thaps1904;Parent=Thaps1904;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2696866 2698061 . - 0 ID=Thaps1904;Parent=Thaps1904;rank=3 chr1 . exon 2696866 2698061 . - . ID=Thaps1904.3;Parent=Thaps1904;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2698236 2699416 . - 0 ID=Thaps1904;Parent=Thaps1904;rank=2 chr1 . exon 2698236 2699416 . - . ID=Thaps1904.2;Parent=Thaps1904;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2699820 2699842 . - 0 ID=Thaps1904;Parent=Thaps1904;rank=1 chr1 . exon 2699820 2699842 . - . ID=Thaps1904.1;Parent=Thaps1904;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2700766 2702079 . + . ID=Thaps1905;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS94];external_name=Thaps1905;logic_name=jgi_thaps3 chr1 ensembl transcript 2700766 2702079 . + . ID=Thaps1905;Parent=Thaps1905;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2700766 2702079 . + 0 ID=Thaps1905;Parent=Thaps1905;rank=1 chr1 . exon 2700766 2702079 . + . ID=Thaps1905.1;Parent=Thaps1905;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2702158 2703291 . - . ID=Thaps1906;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS95];external_name=Thaps1906;logic_name=jgi_thaps3 chr1 ensembl transcript 2702158 2703291 . - . ID=Thaps1906;Parent=Thaps1906;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2702158 2702904 . - 0 ID=Thaps1906;Parent=Thaps1906;rank=2 chr1 . exon 2702158 2702904 . - . ID=Thaps1906.2;Parent=Thaps1906;constitutive=1;rank=2 chr1 . CDS 2703007 2703291 . - 0 ID=Thaps1906;Parent=Thaps1906;rank=1 chr1 . exon 2703007 2703291 . - . ID=Thaps1906.1;Parent=Thaps1906;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2694434 2695123 . + . ID=Thaps21052;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS91];external_name=Thaps21052;logic_name=jgi_thaps3 chr1 ensembl transcript 2694434 2695123 . + . ID=Thaps21052;Parent=Thaps21052;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2694434 2695123 . + 0 ID=Thaps21052;Parent=Thaps21052;rank=1 chr1 . exon 2694434 2695123 . + . ID=Thaps21052.1;Parent=Thaps21052;constitutive=1;rank=1 chr1 . repeat_region 2705250 2705271 . ? . description=trf chr1 ensembl protein_coding_gene 2703932 2704831 . - . ID=Thaps1907;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS96];external_name=Thaps1907;logic_name=jgi_thaps3 chr1 ensembl transcript 2703932 2704831 . - . ID=Thaps1907;Parent=Thaps1907;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2703932 2704831 . - 0 ID=Thaps1907;Parent=Thaps1907;rank=1 chr1 . exon 2703932 2704831 . - . ID=Thaps1907.1;Parent=Thaps1907;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2705273 2706355 . + . ID=Thaps1908;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS97];external_name=Thaps1908;logic_name=jgi_thaps3 chr1 ensembl transcript 2705273 2706355 . + . ID=Thaps1908;Parent=Thaps1908;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2705273 2705630 . + 0 ID=Thaps1908;Parent=Thaps1908;rank=1 chr1 . exon 2705273 2705630 . + . ID=Thaps1908.1;Parent=Thaps1908;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2705754 2705922 . + 0 ID=Thaps1908;Parent=Thaps1908;rank=2 chr1 . exon 2705754 2705922 . + . ID=Thaps1908.2;Parent=Thaps1908;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2706044 2706237 . + 0 ID=Thaps1908;Parent=Thaps1908;rank=3 chr1 . exon 2706044 2706237 . + . ID=Thaps1908.3;Parent=Thaps1908;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2706330 2706355 . + 0 ID=Thaps1908;Parent=Thaps1908;rank=4 chr1 . exon 2706330 2706355 . + . ID=Thaps1908.4;Parent=Thaps1908;constitutive=1;ensembl_end_phase=2;rank=4 chr1 ensembl protein_coding_gene 2706796 2708071 . - . ID=Thaps1909;biotype=protein_coding;description=Plant like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS98];external_name=Thaps1909;logic_name=jgi_thaps3 chr1 ensembl transcript 2706796 2708071 . - . ID=Thaps1909;Parent=Thaps1909;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2706796 2707587 . - 0 ID=Thaps1909;Parent=Thaps1909;rank=2 chr1 . exon 2706796 2707587 . - . ID=Thaps1909.2;Parent=Thaps1909;constitutive=1;rank=2 chr1 . CDS 2707700 2708071 . - 0 ID=Thaps1909;Parent=Thaps1909;rank=1 chr1 . exon 2707700 2708071 . - . ID=Thaps1909.1;Parent=Thaps1909;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2712188 2713603 . + . ID=Thaps1911;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSA0];external_name=Thaps1911;logic_name=jgi_thaps3 chr1 ensembl transcript 2712188 2713603 . + . ID=Thaps1911;Parent=Thaps1911;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2712188 2713603 . + 0 ID=Thaps1911;Parent=Thaps1911;rank=1 chr1 . exon 2712188 2713603 . + . ID=Thaps1911.1;Parent=Thaps1911;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2709096 2711899 . - . ID=Thaps21053;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BS99];external_name=Thaps21053;logic_name=jgi_thaps3 chr1 ensembl transcript 2709096 2711899 . - . ID=Thaps21053;Parent=Thaps21053;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2709096 2709365 . - 0 ID=Thaps21053;Parent=Thaps21053;rank=3 chr1 . exon 2709096 2709365 . - . ID=Thaps21053.3;Parent=Thaps21053;constitutive=1;rank=3 chr1 . CDS 2709422 2710658 . - 0 ID=Thaps21053;Parent=Thaps21053;rank=2 chr1 . exon 2709422 2710658 . - . ID=Thaps21053.2;Parent=Thaps21053;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2710806 2711899 . - 0 ID=Thaps21053;Parent=Thaps21053;rank=1 chr1 . exon 2710806 2711899 . - . ID=Thaps21053.1;Parent=Thaps21053;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . repeat_region 2716350 2716357 . ? . description=dust chr1 . repeat_region 2717134 2717141 . ? . description=dust chr1 ensembl protein_coding_gene 2713888 2715927 . + . ID=Thaps1912;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSA1];external_name=Thaps1912;logic_name=jgi_thaps3 chr1 ensembl transcript 2713888 2715927 . + . ID=Thaps1912;Parent=Thaps1912;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2713888 2715927 . + 0 ID=Thaps1912;Parent=Thaps1912;rank=1 chr1 . exon 2713888 2715927 . + . ID=Thaps1912.1;Parent=Thaps1912;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2717362 2721336 . + . ID=Thaps1913;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSA2];external_name=Thaps1913;logic_name=jgi_thaps3 chr1 ensembl transcript 2717362 2721336 . + . ID=Thaps1913;Parent=Thaps1913;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2717362 2718209 . + 0 ID=Thaps1913;Parent=Thaps1913;rank=1 chr1 . exon 2717362 2718209 . + . ID=Thaps1913.1;Parent=Thaps1913;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2718361 2718820 . + 0 ID=Thaps1913;Parent=Thaps1913;rank=2 chr1 . exon 2718361 2718820 . + . ID=Thaps1913.2;Parent=Thaps1913;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2718900 2719906 . + 0 ID=Thaps1913;Parent=Thaps1913;rank=3 chr1 . exon 2718900 2719906 . + . ID=Thaps1913.3;Parent=Thaps1913;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2720123 2720592 . + 0 ID=Thaps1913;Parent=Thaps1913;rank=4 chr1 . exon 2720123 2720592 . + . ID=Thaps1913.4;Parent=Thaps1913;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2720666 2721336 . + 0 ID=Thaps1913;Parent=Thaps1913;rank=5 chr1 . exon 2720666 2721336 . + . ID=Thaps1913.5;Parent=Thaps1913;constitutive=1;ensembl_end_phase=2;rank=5 chr1 ensembl protein_coding_gene 2721482 2722032 . - . ID=Thaps1914;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSA3];external_name=Thaps1914;logic_name=jgi_thaps3 chr1 ensembl transcript 2721482 2722032 . - . ID=Thaps1914;Parent=Thaps1914;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2721482 2721496 . - 0 ID=Thaps1914;Parent=Thaps1914;rank=2 chr1 . exon 2721482 2721496 . - . ID=Thaps1914.2;Parent=Thaps1914;constitutive=1;rank=2 chr1 . CDS 2721517 2722032 . - 0 ID=Thaps1914;Parent=Thaps1914;rank=1 chr1 . exon 2721517 2722032 . - . ID=Thaps1914.1;Parent=Thaps1914;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2722693 2723553 . - . ID=Thaps1915;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSA4];external_name=Thaps1915;logic_name=jgi_thaps3 chr1 ensembl transcript 2722693 2723553 . - . ID=Thaps1915;Parent=Thaps1915;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2722693 2723553 . - 0 ID=Thaps1915;Parent=Thaps1915;rank=1 chr1 . exon 2722693 2723553 . - . ID=Thaps1915.1;Parent=Thaps1915;constitutive=1;rank=1 chr1 . repeat_region 2729098 2729119 . ? . description=trf chr1 ensembl protein_coding_gene 2727544 2729215 . - . ID=Thaps14004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSA8];external_name=Thaps14004;logic_name=jgi_thaps3 chr1 ensembl transcript 2727544 2729215 . - . ID=Thaps14004;Parent=Thaps14004;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2727544 2728367 . - 0 ID=Thaps14004;Parent=Thaps14004;rank=3 chr1 . exon 2727544 2728367 . - . ID=Thaps14004.3;Parent=Thaps14004;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2728603 2728790 . - 0 ID=Thaps14004;Parent=Thaps14004;rank=2 chr1 . exon 2728603 2728790 . - . ID=Thaps14004.2;Parent=Thaps14004;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2729163 2729215 . - 0 ID=Thaps14004;Parent=Thaps14004;rank=1 chr1 . exon 2729163 2729215 . - . ID=Thaps14004.1;Parent=Thaps14004;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2732646 2733572 . + . ID=Thaps1921;biotype=protein_coding;description=Methyl transferase-like protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSB0];external_name=Thaps1921;logic_name=jgi_thaps3 chr1 ensembl transcript 2732646 2733572 . + . ID=Thaps1921;Parent=Thaps1921;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2732646 2733572 . + 0 ID=Thaps1921;Parent=Thaps1921;rank=1 chr1 . exon 2732646 2733572 . + . ID=Thaps1921.1;Parent=Thaps1921;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2730930 2732179 . + . ID=Thaps261145;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSA9];external_name=Thaps261145;logic_name=jgi_thaps3 chr1 ensembl transcript 2730930 2732179 . + . ID=Thaps261145;Parent=Thaps261145;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2730930 2731154 . + 0 ID=Thaps261145;Parent=Thaps261145;rank=1 chr1 . exon 2730930 2731154 . + . ID=Thaps261145.1;Parent=Thaps261145;constitutive=1;rank=1 chr1 . CDS 2731230 2731368 . + 0 ID=Thaps261145;Parent=Thaps261145;rank=2 chr1 . exon 2731230 2731368 . + . ID=Thaps261145.2;Parent=Thaps261145;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2731587 2732179 . + 0 ID=Thaps261145;Parent=Thaps261145;rank=3 chr1 . exon 2731587 2732179 . + . ID=Thaps261145.3;Parent=Thaps261145;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2723866 2724846 . + . ID=Thaps30928;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSA5];external_name=Thaps30928;logic_name=jgi_thaps3 chr1 ensembl transcript 2723866 2724846 . + . ID=Thaps30928;Parent=Thaps30928;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2723866 2724846 . + 0 ID=Thaps30928;Parent=Thaps30928;rank=1 chr1 . exon 2723866 2724846 . + . ID=Thaps30928.1;Parent=Thaps30928;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2725074 2725616 . - . ID=Thaps30977;biotype=protein_coding;description=Dubious peptide deformylase [Source:UniProtKB/TrEMBL%3BAcc:B8BSA6];external_name=PDF1;logic_name=jgi_thaps3 chr1 ensembl transcript 2725074 2725616 . - . ID=Thaps30977;Parent=Thaps30977;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2725074 2725616 . - 0 ID=Thaps30977;Parent=Thaps30977;rank=1 chr1 . exon 2725074 2725616 . - . ID=Thaps30977.1;Parent=Thaps30977;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2726381 2727025 . + . ID=Thaps31294;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSA7];external_name=Thaps31294;logic_name=jgi_thaps3 chr1 ensembl transcript 2726381 2727025 . + . ID=Thaps31294;Parent=Thaps31294;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2726381 2727025 . + 0 ID=Thaps31294;Parent=Thaps31294;rank=1 chr1 . exon 2726381 2727025 . + . ID=Thaps31294.1;Parent=Thaps31294;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2742234 2743721 . + . ID=Thaps1926;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSB5];external_name=Thaps1926;logic_name=jgi_thaps3 chr1 ensembl transcript 2742234 2743721 . + . ID=Thaps1926;Parent=Thaps1926;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2742234 2743721 . + 0 ID=Thaps1926;Parent=Thaps1926;rank=1 chr1 . exon 2742234 2743721 . + . ID=Thaps1926.1;Parent=Thaps1926;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2739560 2741881 . - . ID=Thaps21058;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSB4];external_name=Thaps21058;logic_name=jgi_thaps3 chr1 ensembl transcript 2739560 2741881 . - . ID=Thaps21058;Parent=Thaps21058;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2739560 2739769 . - 0 ID=Thaps21058;Parent=Thaps21058;rank=2 chr1 . exon 2739560 2739769 . - . ID=Thaps21058.2;Parent=Thaps21058;constitutive=1;rank=2 chr1 . CDS 2740625 2741881 . - 0 ID=Thaps21058;Parent=Thaps21058;rank=1 chr1 . exon 2740625 2741881 . - . ID=Thaps21058.1;Parent=Thaps21058;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2733793 2734332 . - . ID=Thaps225;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSB1];external_name=Thaps225;logic_name=jgi_thaps3 chr1 ensembl transcript 2733793 2734332 . - . ID=Thaps225;Parent=Thaps225;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2733793 2734332 . - 0 ID=Thaps225;Parent=Thaps225;rank=1 chr1 . exon 2733793 2734332 . - . ID=Thaps225.1;Parent=Thaps225;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2735012 2736371 . + . ID=Thaps261147;biotype=protein_coding;description=Sulfate transporter [Source:UniProtKB/TrEMBL%3BAcc:B8BSB2];external_name=Thaps261147;logic_name=jgi_thaps3 chr1 ensembl transcript 2735012 2736371 . + . ID=Thaps261147;Parent=Thaps261147;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2735012 2736371 . + 0 ID=Thaps261147;Parent=Thaps261147;rank=1 chr1 . exon 2735012 2736371 . + . ID=Thaps261147.1;Parent=Thaps261147;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2736499 2737679 . - . ID=Thaps31635;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSB3];external_name=TPT3;logic_name=jgi_thaps3 chr1 ensembl transcript 2736499 2737679 . - . ID=Thaps31635;Parent=Thaps31635;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2736499 2736876 . - 0 ID=Thaps31635;Parent=Thaps31635;rank=2 chr1 . exon 2736499 2736876 . - . ID=Thaps31635.2;Parent=Thaps31635;constitutive=1;rank=2 chr1 . CDS 2737032 2737679 . - 0 ID=Thaps31635;Parent=Thaps31635;rank=1 chr1 . exon 2737032 2737679 . - . ID=Thaps31635.1;Parent=Thaps31635;constitutive=1;rank=1 chr1 . repeat_region 2750214 2750227 . ? . description=dust chr1 . repeat_region 2751215 2751239 . ? . description=trf chr1 . repeat_region 2751219 2751239 . ? . description=dust chr1 . repeat_region 2752452 2752464 . ? . description=dust chr1 ensembl protein_coding_gene 2744693 2746486 . - . ID=Thaps1927;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSB6];external_name=Thaps1927;logic_name=jgi_thaps3 chr1 ensembl transcript 2744693 2746486 . - . ID=Thaps1927;Parent=Thaps1927;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2744693 2746486 . - 0 ID=Thaps1927;Parent=Thaps1927;rank=1 chr1 . exon 2744693 2746486 . - . ID=Thaps1927.1;Parent=Thaps1927;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2751241 2752179 . + . ID=Thaps1930;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSB9];external_name=Thaps1930;logic_name=jgi_thaps3 chr1 ensembl transcript 2751241 2752179 . + . ID=Thaps1930;Parent=Thaps1930;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2751241 2752179 . + 0 ID=Thaps1930;Parent=Thaps1930;rank=1 chr1 . exon 2751241 2752179 . + . ID=Thaps1930.1;Parent=Thaps1930;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2752681 2754450 . + . ID=Thaps1931;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC0];external_name=Thaps1931;logic_name=jgi_thaps3 chr1 ensembl transcript 2752681 2754450 . + . ID=Thaps1931;Parent=Thaps1931;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2752681 2753662 . + 0 ID=Thaps1931;Parent=Thaps1931;rank=1 chr1 . exon 2752681 2753662 . + . ID=Thaps1931.1;Parent=Thaps1931;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2753729 2754450 . + 0 ID=Thaps1931;Parent=Thaps1931;rank=2 chr1 ensembl protein_coding_gene 2747212 2748759 . + . ID=Thaps21059;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSB7];external_name=Thaps21059;logic_name=jgi_thaps3 chr1 ensembl transcript 2747212 2748759 . + . ID=Thaps21059;Parent=Thaps21059;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2747212 2748759 . + 0 ID=Thaps21059;Parent=Thaps21059;rank=1 chr1 . exon 2747212 2748759 . + . ID=Thaps21059.1;Parent=Thaps21059;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2749283 2750861 . - . ID=Thaps21060;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSB8];external_name=Thaps21060;logic_name=jgi_thaps3 chr1 ensembl transcript 2749283 2750861 . - . ID=Thaps21060;Parent=Thaps21060;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2749283 2749418 . - 0 ID=Thaps21060;Parent=Thaps21060;rank=3 chr1 . exon 2749283 2749418 . - . ID=Thaps21060.3;Parent=Thaps21060;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2749525 2750456 . - 0 ID=Thaps21060;Parent=Thaps21060;rank=2 chr1 . exon 2749525 2750456 . - . ID=Thaps21060.2;Parent=Thaps21060;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2750706 2750861 . - 0 ID=Thaps21060;Parent=Thaps21060;rank=1 chr1 . exon 2750706 2750861 . - . ID=Thaps21060.1;Parent=Thaps21060;constitutive=1;rank=1 chr1 . exon 2753729 2754450 . + . ID=Thaps1931.2;Parent=Thaps1931;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2754769 2755926 . - . ID=Thaps1932;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC1];external_name=Thaps1932;logic_name=jgi_thaps3 chr1 ensembl transcript 2754769 2755926 . - . ID=Thaps1932;Parent=Thaps1932;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2754769 2754852 . - 0 ID=Thaps1932;Parent=Thaps1932;rank=4 chr1 . exon 2754769 2754852 . - . ID=Thaps1932.4;Parent=Thaps1932;constitutive=1;rank=4 chr1 . CDS 2754899 2754925 . - 0 ID=Thaps1932;Parent=Thaps1932;rank=3 chr1 . exon 2754899 2754925 . - . ID=Thaps1932.3;Parent=Thaps1932;constitutive=1;rank=3 chr1 . CDS 2755022 2755132 . - 0 ID=Thaps1932;Parent=Thaps1932;rank=2 chr1 . exon 2755022 2755132 . - . ID=Thaps1932.2;Parent=Thaps1932;constitutive=1;rank=2 chr1 . CDS 2755192 2755926 . - 0 ID=Thaps1932;Parent=Thaps1932;rank=1 chr1 . exon 2755192 2755926 . - . ID=Thaps1932.1;Parent=Thaps1932;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2760614 2760970 . + . ID=Thaps1934;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC3];external_name=Thaps1934;logic_name=jgi_thaps3 chr1 ensembl transcript 2760614 2760970 . + . ID=Thaps1934;Parent=Thaps1934;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2760614 2760970 . + 0 ID=Thaps1934;Parent=Thaps1934;rank=1 chr1 . exon 2760614 2760970 . + . ID=Thaps1934.1;Parent=Thaps1934;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2756325 2758949 . + . ID=Thaps21061;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC2];external_name=Thaps21061;logic_name=jgi_thaps3 chr1 ensembl transcript 2756325 2758949 . + . ID=Thaps21061;Parent=Thaps21061;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2756325 2756391 . + 0 ID=Thaps21061;Parent=Thaps21061;rank=1 chr1 . exon 2756325 2756391 . + . ID=Thaps21061.1;Parent=Thaps21061;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2756559 2756588 . + 0 ID=Thaps21061;Parent=Thaps21061;rank=2 chr1 . exon 2756559 2756588 . + . ID=Thaps21061.2;Parent=Thaps21061;constitutive=1;rank=2 chr1 . CDS 2756614 2758949 . + 0 ID=Thaps21061;Parent=Thaps21061;rank=3 chr1 . exon 2756614 2758949 . + . ID=Thaps21061.3;Parent=Thaps21061;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . repeat_region 2763404 2763434 . ? . description=dust chr1 ensembl protein_coding_gene 2768235 2769962 . + . ID=Thaps1937;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC6];external_name=Thaps1937;logic_name=jgi_thaps3 chr1 ensembl transcript 2768235 2769962 . + . ID=Thaps1937;Parent=Thaps1937;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2768235 2769962 . + 0 ID=Thaps1937;Parent=Thaps1937;rank=1 chr1 . exon 2768235 2769962 . + . ID=Thaps1937.1;Parent=Thaps1937;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2770031 2771603 . - . ID=Thaps1938;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC7];external_name=Thaps1938;logic_name=jgi_thaps3 chr1 ensembl transcript 2770031 2771603 . - . ID=Thaps1938;Parent=Thaps1938;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2770031 2770200 . - 0 ID=Thaps1938;Parent=Thaps1938;rank=3 chr1 . exon 2770031 2770200 . - . ID=Thaps1938.3;Parent=Thaps1938;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2770270 2770524 . - 0 ID=Thaps1938;Parent=Thaps1938;rank=2 chr1 . exon 2770270 2770524 . - . ID=Thaps1938.2;Parent=Thaps1938;constitutive=1;rank=2 chr1 . CDS 2770610 2771603 . - 0 ID=Thaps1938;Parent=Thaps1938;rank=1 chr1 . exon 2770610 2771603 . - . ID=Thaps1938.1;Parent=Thaps1938;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2765017 2766645 . + . ID=Thaps268136;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC4];external_name=Thaps268136;logic_name=jgi_thaps3 chr1 ensembl transcript 2765017 2766645 . + . ID=Thaps268136;Parent=Thaps268136;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2765017 2765076 . + 0 ID=Thaps268136;Parent=Thaps268136;rank=1 chr1 . exon 2765017 2765076 . + . ID=Thaps268136.1;Parent=Thaps268136;constitutive=1;rank=1 chr1 . CDS 2765185 2765297 . + 0 ID=Thaps268136;Parent=Thaps268136;rank=2 chr1 . exon 2765185 2765297 . + . ID=Thaps268136.2;Parent=Thaps268136;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2765454 2765614 . + 0 ID=Thaps268136;Parent=Thaps268136;rank=3 chr1 . exon 2765454 2765614 . + . ID=Thaps268136.3;Parent=Thaps268136;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2765681 2765923 . + 0 ID=Thaps268136;Parent=Thaps268136;rank=4 chr1 . exon 2765681 2765923 . + . ID=Thaps268136.4;Parent=Thaps268136;constitutive=1;rank=4 chr1 . CDS 2766008 2766138 . + 0 ID=Thaps268136;Parent=Thaps268136;rank=5 chr1 . exon 2766008 2766138 . + . ID=Thaps268136.5;Parent=Thaps268136;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 2766217 2766313 . + 0 ID=Thaps268136;Parent=Thaps268136;rank=6 chr1 . exon 2766217 2766313 . + . ID=Thaps268136.6;Parent=Thaps268136;constitutive=1;ensembl_end_phase=1;rank=6 chr1 . CDS 2766422 2766645 . + 0 ID=Thaps268136;Parent=Thaps268136;rank=7 chr1 . exon 2766422 2766645 . + . ID=Thaps268136.7;Parent=Thaps268136;constitutive=1;ensembl_end_phase=2;rank=7 chr1 ensembl protein_coding_gene 2772497 2773969 . + . ID=Thaps30972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC8];external_name=Thaps30972;logic_name=jgi_thaps3 chr1 ensembl transcript 2772497 2773969 . + . ID=Thaps30972;Parent=Thaps30972;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2772497 2772556 . + 0 ID=Thaps30972;Parent=Thaps30972;rank=1 chr1 . exon 2772497 2772556 . + . ID=Thaps30972.1;Parent=Thaps30972;constitutive=1;rank=1 chr1 . CDS 2772627 2772986 . + 0 ID=Thaps30972;Parent=Thaps30972;rank=2 chr1 . exon 2772627 2772986 . + . ID=Thaps30972.2;Parent=Thaps30972;constitutive=1;rank=2 chr1 . CDS 2773064 2773549 . + 0 ID=Thaps30972;Parent=Thaps30972;rank=3 chr1 . exon 2773064 2773549 . + . ID=Thaps30972.3;Parent=Thaps30972;constitutive=1;rank=3 chr1 . CDS 2773643 2773969 . + 0 ID=Thaps30972;Parent=Thaps30972;rank=4 chr1 ensembl protein_coding_gene 2766992 2767660 . - . ID=Thaps31169;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC5];external_name=Thaps31169;logic_name=jgi_thaps3 chr1 ensembl transcript 2766992 2767660 . - . ID=Thaps31169;Parent=Thaps31169;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2766992 2767180 . - 0 ID=Thaps31169;Parent=Thaps31169;rank=2 chr1 . exon 2766992 2767180 . - . ID=Thaps31169.2;Parent=Thaps31169;constitutive=1;rank=2 chr1 . CDS 2767379 2767660 . - 0 ID=Thaps31169;Parent=Thaps31169;rank=1 chr1 . exon 2767379 2767660 . - . ID=Thaps31169.1;Parent=Thaps31169;constitutive=1;rank=1 chr1 . repeat_region 2782337 2786300 . - . description=Harbinger3_TP chr1 . repeat_region 2783078 2783123 . ? . description=trf chr1 ensembl protein_coding_gene 2774163 2775131 . - . ID=Thaps1940;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSC9];external_name=Thaps1940;logic_name=jgi_thaps3 chr1 ensembl transcript 2774163 2775131 . - . ID=Thaps1940;Parent=Thaps1940;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2774163 2775131 . - 0 ID=Thaps1940;Parent=Thaps1940;rank=1 chr1 . exon 2774163 2775131 . - . ID=Thaps1940.1;Parent=Thaps1940;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2775469 2776416 . + . ID=Thaps1941;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD0];external_name=Thaps1941;logic_name=jgi_thaps3 chr1 ensembl transcript 2775469 2776416 . + . ID=Thaps1941;Parent=Thaps1941;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2775469 2776416 . + 0 ID=Thaps1941;Parent=Thaps1941;rank=1 chr1 . exon 2775469 2776416 . + . ID=Thaps1941.1;Parent=Thaps1941;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2777327 2778658 . + . ID=Thaps1942;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD1];external_name=Thaps1942;logic_name=jgi_thaps3 chr1 ensembl transcript 2777327 2778658 . + . ID=Thaps1942;Parent=Thaps1942;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2777327 2778658 . + 0 ID=Thaps1942;Parent=Thaps1942;rank=1 chr1 . exon 2777327 2778658 . + . ID=Thaps1942.1;Parent=Thaps1942;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2778964 2780410 . - . ID=Thaps1943;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD2];external_name=Thaps1943;logic_name=jgi_thaps3 chr1 ensembl transcript 2778964 2780410 . - . ID=Thaps1943;Parent=Thaps1943;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2778964 2780125 . - 0 ID=Thaps1943;Parent=Thaps1943;rank=2 chr1 . exon 2778964 2780125 . - . ID=Thaps1943.2;Parent=Thaps1943;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2780253 2780410 . - 0 ID=Thaps1943;Parent=Thaps1943;rank=1 chr1 . exon 2780253 2780410 . - . ID=Thaps1943.1;Parent=Thaps1943;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . exon 2773643 2773969 . + . ID=Thaps30972.4;Parent=Thaps30972;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2781210 2782035 . - . ID=Thaps31156;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD3];external_name=Thaps31156;logic_name=jgi_thaps3 chr1 ensembl transcript 2781210 2782035 . - . ID=Thaps31156;Parent=Thaps31156;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2781210 2781364 . - 0 ID=Thaps31156;Parent=Thaps31156;rank=3 chr1 . exon 2781210 2781364 . - . ID=Thaps31156.3;Parent=Thaps31156;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2781535 2781718 . - 0 ID=Thaps31156;Parent=Thaps31156;rank=2 chr1 . exon 2781535 2781718 . - . ID=Thaps31156.2;Parent=Thaps31156;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2781904 2782035 . - 0 ID=Thaps31156;Parent=Thaps31156;rank=1 chr1 . exon 2781904 2782035 . - . ID=Thaps31156.1;Parent=Thaps31156;constitutive=1;rank=1 chr1 . repeat_region 2786047 2786055 . ? . description=dust chr1 . repeat_region 2789113 2789120 . ? . description=dust chr1 ensembl protein_coding_gene 2786693 2787703 . + . ID=Thaps1945;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD4];external_name=Thaps1945;logic_name=jgi_thaps3 chr1 ensembl transcript 2786693 2787703 . + . ID=Thaps1945;Parent=Thaps1945;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2786693 2787703 . + 0 ID=Thaps1945;Parent=Thaps1945;rank=1 chr1 . exon 2786693 2787703 . + . ID=Thaps1945.1;Parent=Thaps1945;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2787763 2789155 . - . ID=Thaps1946;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD5];external_name=Thaps1946;logic_name=jgi_thaps3 chr1 ensembl transcript 2787763 2789155 . - . ID=Thaps1946;Parent=Thaps1946;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2787763 2788431 . - 0 ID=Thaps1946;Parent=Thaps1946;rank=2 chr1 . exon 2787763 2788431 . - . ID=Thaps1946.2;Parent=Thaps1946;constitutive=1;rank=2 chr1 . CDS 2788526 2789155 . - 0 ID=Thaps1946;Parent=Thaps1946;rank=1 chr1 . exon 2788526 2789155 . - . ID=Thaps1946.1;Parent=Thaps1946;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2789410 2790438 . - . ID=Thaps1947;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD6];external_name=Thaps1947;logic_name=jgi_thaps3 chr1 ensembl transcript 2789410 2790438 . - . ID=Thaps1947;Parent=Thaps1947;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2789410 2790438 . - 0 ID=Thaps1947;Parent=Thaps1947;rank=1 chr1 . exon 2789410 2790438 . - . ID=Thaps1947.1;Parent=Thaps1947;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2792176 2792652 . - . ID=Thaps1949;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD8];external_name=Thaps1949;logic_name=jgi_thaps3 chr1 ensembl transcript 2792176 2792652 . - . ID=Thaps1949;Parent=Thaps1949;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2792176 2792652 . - 0 ID=Thaps1949;Parent=Thaps1949;rank=1 chr1 . exon 2792176 2792652 . - . ID=Thaps1949.1;Parent=Thaps1949;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2791676 2791885 . + . ID=Thaps31446;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD7];external_name=Thaps31446;logic_name=jgi_thaps3 chr1 ensembl transcript 2791676 2791885 . + . ID=Thaps31446;Parent=Thaps31446;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2791676 2791885 . + 0 ID=Thaps31446;Parent=Thaps31446;rank=1 chr1 . exon 2791676 2791885 . + . ID=Thaps31446.1;Parent=Thaps31446;constitutive=1;rank=1 chr1 . repeat_region 2803000 2803035 . ? . description=trf chr1 ensembl protein_coding_gene 2795281 2796177 . - . ID=Thaps1951;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSD9];external_name=Thaps1951;logic_name=jgi_thaps3 chr1 ensembl transcript 2795281 2796177 . - . ID=Thaps1951;Parent=Thaps1951;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2795281 2796177 . - 0 ID=Thaps1951;Parent=Thaps1951;rank=1 chr1 . exon 2795281 2796177 . - . ID=Thaps1951.1;Parent=Thaps1951;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2800218 2801432 . + . ID=Thaps1953;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE1];external_name=Thaps1953;logic_name=jgi_thaps3 chr1 ensembl transcript 2800218 2801432 . + . ID=Thaps1953;Parent=Thaps1953;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2800218 2800448 . + 0 ID=Thaps1953;Parent=Thaps1953;rank=1 chr1 . exon 2800218 2800448 . + . ID=Thaps1953.1;Parent=Thaps1953;constitutive=1;rank=1 chr1 . CDS 2800526 2800576 . + 0 ID=Thaps1953;Parent=Thaps1953;rank=2 chr1 . exon 2800526 2800576 . + . ID=Thaps1953.2;Parent=Thaps1953;constitutive=1;rank=2 chr1 . CDS 2801001 2801432 . + 0 ID=Thaps1953;Parent=Thaps1953;rank=3 chr1 . exon 2801001 2801432 . + . ID=Thaps1953.3;Parent=Thaps1953;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 2801889 2802526 . - . ID=Thaps1954;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE2];external_name=Thaps1954;logic_name=jgi_thaps3 chr1 ensembl transcript 2801889 2802526 . - . ID=Thaps1954;Parent=Thaps1954;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2801889 2802005 . - 0 ID=Thaps1954;Parent=Thaps1954;rank=2 chr1 . exon 2801889 2802005 . - . ID=Thaps1954.2;Parent=Thaps1954;constitutive=1;rank=2 chr1 . CDS 2802101 2802526 . - 0 ID=Thaps1954;Parent=Thaps1954;rank=1 chr1 . exon 2802101 2802526 . - . ID=Thaps1954.1;Parent=Thaps1954;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2803218 2804235 . + . ID=Thaps1955;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE3];external_name=Thaps1955;logic_name=jgi_thaps3 chr1 ensembl transcript 2803218 2804235 . + . ID=Thaps1955;Parent=Thaps1955;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2803218 2803413 . + 0 ID=Thaps1955;Parent=Thaps1955;rank=1 chr1 . exon 2803218 2803413 . + . ID=Thaps1955.1;Parent=Thaps1955;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2803490 2804235 . + 0 ID=Thaps1955;Parent=Thaps1955;rank=2 chr1 ensembl protein_coding_gene 2796744 2798793 . + . ID=Thaps21066;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE0];external_name=Thaps21066;logic_name=jgi_thaps3 chr1 ensembl transcript 2796744 2798793 . + . ID=Thaps21066;Parent=Thaps21066;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2796744 2798589 . + 0 ID=Thaps21066;Parent=Thaps21066;rank=1 chr1 . exon 2796744 2798589 . + . ID=Thaps21066.1;Parent=Thaps21066;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2798657 2798793 . + 0 ID=Thaps21066;Parent=Thaps21066;rank=2 chr1 . exon 2798657 2798793 . + . ID=Thaps21066.2;Parent=Thaps21066;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . exon 2803490 2804235 . + . ID=Thaps1955.2;Parent=Thaps1955;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2805701 2806477 . + . ID=Thaps1957;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE5];external_name=Thaps1957;logic_name=jgi_thaps3 chr1 ensembl transcript 2805701 2806477 . + . ID=Thaps1957;Parent=Thaps1957;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2805701 2806477 . + 0 ID=Thaps1957;Parent=Thaps1957;rank=1 chr1 . exon 2805701 2806477 . + . ID=Thaps1957.1;Parent=Thaps1957;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2808645 2811437 . - . ID=Thaps1959;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE7];external_name=Thaps1959;logic_name=jgi_thaps3 chr1 ensembl transcript 2808645 2811437 . - . ID=Thaps1959;Parent=Thaps1959;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2808645 2811437 . - 0 ID=Thaps1959;Parent=Thaps1959;rank=1 chr1 . exon 2808645 2811437 . - . ID=Thaps1959.1;Parent=Thaps1959;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2811913 2813599 . + . ID=Thaps1960;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE8];external_name=Thaps1960;logic_name=jgi_thaps3 chr1 ensembl transcript 2811913 2813599 . + . ID=Thaps1960;Parent=Thaps1960;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2811913 2813428 . + 0 ID=Thaps1960;Parent=Thaps1960;rank=1 chr1 . exon 2811913 2813428 . + . ID=Thaps1960.1;Parent=Thaps1960;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2813478 2813599 . + 0 ID=Thaps1960;Parent=Thaps1960;rank=2 chr1 ensembl protein_coding_gene 2804383 2805260 . - . ID=Thaps21067;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE4];external_name=Thaps21067;logic_name=jgi_thaps3 chr1 ensembl transcript 2804383 2805260 . - . ID=Thaps21067;Parent=Thaps21067;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2804383 2805032 . - 0 ID=Thaps21067;Parent=Thaps21067;rank=3 chr1 . exon 2804383 2805032 . - . ID=Thaps21067.3;Parent=Thaps21067;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2805160 2805207 . - 0 ID=Thaps21067;Parent=Thaps21067;rank=2 chr1 . exon 2805160 2805207 . - . ID=Thaps21067.2;Parent=Thaps21067;constitutive=1;rank=2 chr1 . CDS 2805233 2805260 . - 0 ID=Thaps21067;Parent=Thaps21067;rank=1 chr1 . exon 2805233 2805260 . - . ID=Thaps21067.1;Parent=Thaps21067;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2807142 2807753 . + . ID=Thaps31007;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE6];external_name=Thaps31007;logic_name=jgi_thaps3 chr1 ensembl transcript 2807142 2807753 . + . ID=Thaps31007;Parent=Thaps31007;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2807142 2807753 . + 0 ID=Thaps31007;Parent=Thaps31007;rank=1 chr1 . exon 2807142 2807753 . + . ID=Thaps31007.1;Parent=Thaps31007;constitutive=1;rank=1 chr1 . repeat_region 2820471 2820501 . ? . description=trf chr1 . repeat_region 2821748 2821788 . ? . description=trf chr1 . exon 2813478 2813599 . + . ID=Thaps1960.2;Parent=Thaps1960;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2814211 2815596 . - . ID=Thaps1961;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSE9];external_name=Thaps1961;logic_name=jgi_thaps3 chr1 ensembl transcript 2814211 2815596 . - . ID=Thaps1961;Parent=Thaps1961;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2814211 2815596 . - 0 ID=Thaps1961;Parent=Thaps1961;rank=1 chr1 . exon 2814211 2815596 . - . ID=Thaps1961.1;Parent=Thaps1961;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2815776 2816685 . + . ID=Thaps1962;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF0];external_name=Thaps1962;logic_name=jgi_thaps3 chr1 ensembl transcript 2815776 2816685 . + . ID=Thaps1962;Parent=Thaps1962;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2815776 2815830 . + 0 ID=Thaps1962;Parent=Thaps1962;rank=1 chr1 . exon 2815776 2815830 . + . ID=Thaps1962.1;Parent=Thaps1962;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2815922 2816685 . + 0 ID=Thaps1962;Parent=Thaps1962;rank=2 chr1 . exon 2815922 2816685 . + . ID=Thaps1962.2;Parent=Thaps1962;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 2820751 2823795 . - . ID=Thaps1964;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF2];external_name=Thaps1964;logic_name=jgi_thaps3 chr1 ensembl transcript 2820751 2823795 . - . ID=Thaps1964;Parent=Thaps1964;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2820751 2823795 . - 0 ID=Thaps1964;Parent=Thaps1964;rank=1 chr1 . exon 2820751 2823795 . - . ID=Thaps1964.1;Parent=Thaps1964;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2818384 2820348 . - . ID=Thaps21068;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF1];external_name=Thaps21068;logic_name=jgi_thaps3 chr1 ensembl transcript 2818384 2820348 . - . ID=Thaps21068;Parent=Thaps21068;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2818384 2818883 . - 0 ID=Thaps21068;Parent=Thaps21068;rank=3 chr1 . exon 2818384 2818883 . - . ID=Thaps21068.3;Parent=Thaps21068;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2819379 2820052 . - 0 ID=Thaps21068;Parent=Thaps21068;rank=2 chr1 . exon 2819379 2820052 . - . ID=Thaps21068.2;Parent=Thaps21068;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2820296 2820348 . - 0 ID=Thaps21068;Parent=Thaps21068;rank=1 chr1 . exon 2820296 2820348 . - . ID=Thaps21068.1;Parent=Thaps21068;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2824730 2829047 . + . ID=Thaps1965;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF3];external_name=Thaps1965;logic_name=jgi_thaps3 chr1 ensembl transcript 2824730 2829047 . + . ID=Thaps1965;Parent=Thaps1965;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2824730 2826319 . + 0 ID=Thaps1965;Parent=Thaps1965;rank=1 chr1 . exon 2824730 2826319 . + . ID=Thaps1965.1;Parent=Thaps1965;constitutive=1;rank=1 chr1 . CDS 2826441 2828598 . + 0 ID=Thaps1965;Parent=Thaps1965;rank=2 chr1 . exon 2826441 2828598 . + . ID=Thaps1965.2;Parent=Thaps1965;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2828620 2829047 . + 0 ID=Thaps1965;Parent=Thaps1965;rank=3 chr1 . exon 2828620 2829047 . + . ID=Thaps1965.3;Parent=Thaps1965;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2831566 2832408 . - . ID=Thaps1967;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF5];external_name=Thaps1967;logic_name=jgi_thaps3 chr1 ensembl transcript 2831566 2832408 . - . ID=Thaps1967;Parent=Thaps1967;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2831566 2832408 . - 0 ID=Thaps1967;Parent=Thaps1967;rank=1 chr1 . exon 2831566 2832408 . - . ID=Thaps1967.1;Parent=Thaps1967;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2829965 2830929 . - . ID=Thaps21069;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF4];external_name=Thaps21069;logic_name=jgi_thaps3 chr1 ensembl transcript 2829965 2830929 . - . ID=Thaps21069;Parent=Thaps21069;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2829965 2830569 . - 0 ID=Thaps21069;Parent=Thaps21069;rank=2 chr1 . exon 2829965 2830569 . - . ID=Thaps21069.2;Parent=Thaps21069;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2830686 2830929 . - 0 ID=Thaps21069;Parent=Thaps21069;rank=1 chr1 . exon 2830686 2830929 . - . ID=Thaps21069.1;Parent=Thaps21069;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2833377 2835317 . - . ID=Thaps1968;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF6];external_name=Thaps1968;logic_name=jgi_thaps3 chr1 ensembl transcript 2833377 2835317 . - . ID=Thaps1968;Parent=Thaps1968;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2833377 2835317 . - 0 ID=Thaps1968;Parent=Thaps1968;rank=1 chr1 . exon 2833377 2835317 . - . ID=Thaps1968.1;Parent=Thaps1968;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2835945 2837987 . - . ID=Thaps1969;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF7];external_name=Thaps1969;logic_name=jgi_thaps3 chr1 ensembl transcript 2835945 2837987 . - . ID=Thaps1969;Parent=Thaps1969;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2835945 2836602 . - 0 ID=Thaps1969;Parent=Thaps1969;rank=3 chr1 . exon 2835945 2836602 . - . ID=Thaps1969.3;Parent=Thaps1969;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2836689 2836908 . - 0 ID=Thaps1969;Parent=Thaps1969;rank=2 chr1 . exon 2836689 2836908 . - . ID=Thaps1969.2;Parent=Thaps1969;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2837081 2837987 . - 0 ID=Thaps1969;Parent=Thaps1969;rank=1 chr1 . exon 2837081 2837987 . - . ID=Thaps1969.1;Parent=Thaps1969;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2840139 2841481 . - . ID=Thaps1971;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF9];external_name=Thaps1971;logic_name=jgi_thaps3 chr1 ensembl transcript 2840139 2841481 . - . ID=Thaps1971;Parent=Thaps1971;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2840139 2840701 . - 0 ID=Thaps1971;Parent=Thaps1971;rank=3 chr1 . exon 2840139 2840701 . - . ID=Thaps1971.3;Parent=Thaps1971;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2840747 2841346 . - 0 ID=Thaps1971;Parent=Thaps1971;rank=2 chr1 . exon 2840747 2841346 . - . ID=Thaps1971.2;Parent=Thaps1971;constitutive=1;rank=2 chr1 . CDS 2841433 2841481 . - 0 ID=Thaps1971;Parent=Thaps1971;rank=1 chr1 . exon 2841433 2841481 . - . ID=Thaps1971.1;Parent=Thaps1971;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2842344 2846081 . - . ID=Thaps1972;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSG0];external_name=Thaps1972;logic_name=jgi_thaps3 chr1 ensembl transcript 2842344 2846081 . - . ID=Thaps1972;Parent=Thaps1972;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2842344 2843322 . - 0 ID=Thaps1972;Parent=Thaps1972;rank=8 chr1 . exon 2842344 2843322 . - . ID=Thaps1972.8;Parent=Thaps1972;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . CDS 2843408 2843603 . - 0 ID=Thaps1972;Parent=Thaps1972;rank=7 chr1 . CDS 2843694 2843849 . - 0 ID=Thaps1972;Parent=Thaps1972;rank=6 chr1 . CDS 2844150 2844530 . - 0 ID=Thaps1972;Parent=Thaps1972;rank=5 chr1 . CDS 2844624 2844969 . - 0 ID=Thaps1972;Parent=Thaps1972;rank=4 chr1 . CDS 2845047 2845452 . - 0 ID=Thaps1972;Parent=Thaps1972;rank=3 chr1 . CDS 2845568 2845867 . - 0 ID=Thaps1972;Parent=Thaps1972;rank=2 chr1 . CDS 2845975 2846081 . - 0 ID=Thaps1972;Parent=Thaps1972;rank=1 chr1 ensembl protein_coding_gene 2838175 2840051 . + . ID=Thaps21070;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSF8];external_name=Thaps21070;logic_name=jgi_thaps3 chr1 ensembl transcript 2838175 2840051 . + . ID=Thaps21070;Parent=Thaps21070;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2838175 2839256 . + 0 ID=Thaps21070;Parent=Thaps21070;rank=1 chr1 . exon 2838175 2839256 . + . ID=Thaps21070.1;Parent=Thaps21070;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2839409 2840051 . + 0 ID=Thaps21070;Parent=Thaps21070;rank=2 chr1 . exon 2839409 2840051 . + . ID=Thaps21070.2;Parent=Thaps21070;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . repeat_region 2846135 2846162 . ? . description=trf chr1 . repeat_region 2846466 2846575 . ? . description=trf chr1 . exon 2843408 2843603 . - . ID=Thaps1972.7;Parent=Thaps1972;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . exon 2843694 2843849 . - . ID=Thaps1972.6;Parent=Thaps1972;constitutive=1;rank=6 chr1 . exon 2844150 2844530 . - . ID=Thaps1972.5;Parent=Thaps1972;constitutive=1;rank=5 chr1 . exon 2844624 2844969 . - . ID=Thaps1972.4;Parent=Thaps1972;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . exon 2845047 2845452 . - . ID=Thaps1972.3;Parent=Thaps1972;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . exon 2845568 2845867 . - . ID=Thaps1972.2;Parent=Thaps1972;constitutive=1;rank=2 chr1 . exon 2845975 2846081 . - . ID=Thaps1972.1;Parent=Thaps1972;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2847942 2848760 . + . ID=Thaps1973;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSG1];external_name=Thaps1973;logic_name=jgi_thaps3 chr1 ensembl transcript 2847942 2848760 . + . ID=Thaps1973;Parent=Thaps1973;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2847942 2847968 . + 0 ID=Thaps1973;Parent=Thaps1973;rank=1 chr1 . exon 2847942 2847968 . + . ID=Thaps1973.1;Parent=Thaps1973;constitutive=1;rank=1 chr1 . CDS 2848065 2848308 . + 0 ID=Thaps1973;Parent=Thaps1973;rank=2 chr1 . exon 2848065 2848308 . + . ID=Thaps1973.2;Parent=Thaps1973;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2848398 2848450 . + 0 ID=Thaps1973;Parent=Thaps1973;rank=3 chr1 . exon 2848398 2848450 . + . ID=Thaps1973.3;Parent=Thaps1973;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2848527 2848760 . + 0 ID=Thaps1973;Parent=Thaps1973;rank=4 chr1 . exon 2848527 2848760 . + . ID=Thaps1973.4;Parent=Thaps1973;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2850564 2852075 . + . ID=Thaps1975;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSG3];external_name=Thaps1975;logic_name=jgi_thaps3 chr1 ensembl transcript 2850564 2852075 . + . ID=Thaps1975;Parent=Thaps1975;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2850564 2852075 . + 0 ID=Thaps1975;Parent=Thaps1975;rank=1 chr1 . exon 2850564 2852075 . + . ID=Thaps1975.1;Parent=Thaps1975;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2852680 2854083 . - . ID=Thaps1976;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSG4];external_name=Thaps1976;logic_name=jgi_thaps3 chr1 ensembl transcript 2852680 2854083 . - . ID=Thaps1976;Parent=Thaps1976;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2852680 2854083 . - 0 ID=Thaps1976;Parent=Thaps1976;rank=1 chr1 . exon 2852680 2854083 . - . ID=Thaps1976.1;Parent=Thaps1976;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2849139 2850176 . - . ID=Thaps31128;biotype=protein_coding;description=Fucoxanthin chlorophyll a/c protein%2C LI818 clade [Source:UniProtKB/TrEMBL%3BAcc:B8BSG2];external_name=LHCX5;logic_name=jgi_thaps3 chr1 ensembl transcript 2849139 2850176 . - . ID=Thaps31128;Parent=Thaps31128;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2849139 2849248 . - 0 ID=Thaps31128;Parent=Thaps31128;rank=4 chr1 . exon 2849139 2849248 . - . ID=Thaps31128.4;Parent=Thaps31128;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2849345 2849454 . - 0 ID=Thaps31128;Parent=Thaps31128;rank=3 chr1 . exon 2849345 2849454 . - . ID=Thaps31128.3;Parent=Thaps31128;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2849553 2849775 . - 0 ID=Thaps31128;Parent=Thaps31128;rank=2 chr1 . exon 2849553 2849775 . - . ID=Thaps31128.2;Parent=Thaps31128;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2849909 2850176 . - 0 ID=Thaps31128;Parent=Thaps31128;rank=1 chr1 . exon 2849909 2850176 . - . ID=Thaps31128.1;Parent=Thaps31128;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 2857141 2857151 . ? . description=dust chr1 ensembl protein_coding_gene 2854779 2855489 . + . ID=Thaps1977;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSG5];external_name=Thaps1977;logic_name=jgi_thaps3 chr1 ensembl transcript 2854779 2855489 . + . ID=Thaps1977;Parent=Thaps1977;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2854779 2855489 . + 0 ID=Thaps1977;Parent=Thaps1977;rank=1 chr1 . exon 2854779 2855489 . + . ID=Thaps1977.1;Parent=Thaps1977;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2859200 2859886 . - . ID=Thaps1979;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSG7];external_name=Thaps1979;logic_name=jgi_thaps3 chr1 ensembl transcript 2859200 2859886 . - . ID=Thaps1979;Parent=Thaps1979;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2859200 2859886 . - 0 ID=Thaps1979;Parent=Thaps1979;rank=1 chr1 . exon 2859200 2859886 . - . ID=Thaps1979.1;Parent=Thaps1979;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2862563 2863126 . - . ID=Thaps1981;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSG9];external_name=Thaps1981;logic_name=jgi_thaps3 chr1 ensembl transcript 2862563 2863126 . - . ID=Thaps1981;Parent=Thaps1981;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2862563 2863126 . - 0 ID=Thaps1981;Parent=Thaps1981;rank=1 chr1 . exon 2862563 2863126 . - . ID=Thaps1981.1;Parent=Thaps1981;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2860680 2860886 . + . ID=Thaps19837;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSG8];external_name=Thaps19837;logic_name=jgi_thaps3 chr1 ensembl transcript 2860680 2860886 . + . ID=Thaps19837;Parent=Thaps19837;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2860680 2860886 . + 0 ID=Thaps19837;Parent=Thaps19837;rank=1 chr1 . exon 2860680 2860886 . + . ID=Thaps19837.1;Parent=Thaps19837;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2856511 2858969 . + . ID=Thaps21071;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSG6];external_name=Thaps21071;logic_name=jgi_thaps3 chr1 ensembl transcript 2856511 2858969 . + . ID=Thaps21071;Parent=Thaps21071;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2856511 2856772 . + 0 ID=Thaps21071;Parent=Thaps21071;rank=1 chr1 . exon 2856511 2856772 . + . ID=Thaps21071.1;Parent=Thaps21071;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2856843 2856931 . + 0 ID=Thaps21071;Parent=Thaps21071;rank=2 chr1 . exon 2856843 2856931 . + . ID=Thaps21071.2;Parent=Thaps21071;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2857115 2857433 . + 0 ID=Thaps21071;Parent=Thaps21071;rank=3 chr1 . exon 2857115 2857433 . + . ID=Thaps21071.3;Parent=Thaps21071;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2857495 2858131 . + 0 ID=Thaps21071;Parent=Thaps21071;rank=4 chr1 . exon 2857495 2858131 . + . ID=Thaps21071.4;Parent=Thaps21071;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 2858231 2858969 . + 0 ID=Thaps21071;Parent=Thaps21071;rank=5 chr1 . exon 2858231 2858969 . + . ID=Thaps21071.5;Parent=Thaps21071;constitutive=1;ensembl_end_phase=1;rank=5 chr1 ensembl protein_coding_gene 2870638 2872222 . + . ID=Thaps1985;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSH3];external_name=Thaps1985;logic_name=jgi_thaps3 chr1 ensembl transcript 2870638 2872222 . + . ID=Thaps1985;Parent=Thaps1985;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2870638 2871001 . + 0 ID=Thaps1985;Parent=Thaps1985;rank=1 chr1 . exon 2870638 2871001 . + . ID=Thaps1985.1;Parent=Thaps1985;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2871258 2871802 . + 0 ID=Thaps1985;Parent=Thaps1985;rank=2 chr1 . exon 2871258 2871802 . + . ID=Thaps1985.2;Parent=Thaps1985;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2871884 2872222 . + 0 ID=Thaps1985;Parent=Thaps1985;rank=3 chr1 . exon 2871884 2872222 . + . ID=Thaps1985.3;Parent=Thaps1985;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 2872287 2874557 . - . ID=Thaps1986;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSH4];external_name=Thaps1986;logic_name=jgi_thaps3 chr1 ensembl transcript 2872287 2874557 . - . ID=Thaps1986;Parent=Thaps1986;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2872287 2874557 . - 0 ID=Thaps1986;Parent=Thaps1986;rank=1 chr1 . exon 2872287 2874557 . - . ID=Thaps1986.1;Parent=Thaps1986;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2866276 2868026 . + . ID=Thaps261158;biotype=protein_coding;description=Calcium channel [Source:UniProtKB/TrEMBL%3BAcc:B8BSH1];external_name=Thaps261158;logic_name=jgi_thaps3 chr1 ensembl transcript 2866276 2868026 . + . ID=Thaps261158;Parent=Thaps261158;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2866276 2867579 . + 0 ID=Thaps261158;Parent=Thaps261158;rank=1 chr1 . exon 2866276 2867579 . + . ID=Thaps261158.1;Parent=Thaps261158;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2867669 2868026 . + 0 ID=Thaps261158;Parent=Thaps261158;rank=2 chr1 . exon 2867669 2868026 . + . ID=Thaps261158.2;Parent=Thaps261158;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 2869401 2870301 . - . ID=Thaps26868;biotype=protein_coding;description=Proteasome subunit alpha type [Source:UniProtKB/TrEMBL%3BAcc:B8BSH2];external_name=PSA3;logic_name=jgi_thaps3 chr1 ensembl transcript 2869401 2870301 . - . ID=Thaps26868;Parent=Thaps26868;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2869401 2869917 . - 0 ID=Thaps26868;Parent=Thaps26868;rank=2 chr1 . exon 2869401 2869917 . - . ID=Thaps26868.2;Parent=Thaps26868;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2869994 2870301 . - 0 ID=Thaps26868;Parent=Thaps26868;rank=1 chr1 . exon 2869994 2870301 . - . ID=Thaps26868.1;Parent=Thaps26868;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2863578 2864437 . + . ID=Thaps30919;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSH0];external_name=Thaps30919;logic_name=jgi_thaps3 chr1 ensembl transcript 2863578 2864437 . + . ID=Thaps30919;Parent=Thaps30919;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2863578 2863710 . + 0 ID=Thaps30919;Parent=Thaps30919;rank=1 chr1 . exon 2863578 2863710 . + . ID=Thaps30919.1;Parent=Thaps30919;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2863902 2864437 . + 0 ID=Thaps30919;Parent=Thaps30919;rank=2 chr1 . exon 2863902 2864437 . + . ID=Thaps30919.2;Parent=Thaps30919;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 2878076 2878083 . ? . description=dust chr1 ensembl protein_coding_gene 2880895 2881392 . - . ID=Thaps17673;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSH9];external_name=Thaps17673;logic_name=jgi_thaps3 chr1 ensembl transcript 2880895 2881392 . - . ID=Thaps17673;Parent=Thaps17673;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2880895 2881392 . - 0 ID=Thaps17673;Parent=Thaps17673;rank=1 chr1 . exon 2880895 2881392 . - . ID=Thaps17673.1;Parent=Thaps17673;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2879971 2880627 . + . ID=Thaps1989;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSH8];external_name=Thaps1989;logic_name=jgi_thaps3 chr1 ensembl transcript 2879971 2880627 . + . ID=Thaps1989;Parent=Thaps1989;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2879971 2880627 . + 0 ID=Thaps1989;Parent=Thaps1989;rank=1 chr1 . exon 2879971 2880627 . + . ID=Thaps1989.1;Parent=Thaps1989;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2882015 2882752 . + . ID=Thaps21074;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI0];external_name=Thaps21074;logic_name=jgi_thaps3 chr1 ensembl transcript 2882015 2882752 . + . ID=Thaps21074;Parent=Thaps21074;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2882015 2882286 . + 0 ID=Thaps21074;Parent=Thaps21074;rank=1 chr1 . exon 2882015 2882286 . + . ID=Thaps21074.1;Parent=Thaps21074;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2882406 2882442 . + 0 ID=Thaps21074;Parent=Thaps21074;rank=2 chr1 . exon 2882406 2882442 . + . ID=Thaps21074.2;Parent=Thaps21074;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2882558 2882644 . + 0 ID=Thaps21074;Parent=Thaps21074;rank=3 chr1 . exon 2882558 2882644 . + . ID=Thaps21074.3;Parent=Thaps21074;constitutive=1;rank=3 chr1 . CDS 2882735 2882752 . + 0 ID=Thaps21074;Parent=Thaps21074;rank=4 chr1 . exon 2882735 2882752 . + . ID=Thaps21074.4;Parent=Thaps21074;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2875972 2876505 . - . ID=Thaps261161;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSH5];external_name=Thaps261161;logic_name=jgi_thaps3 chr1 ensembl transcript 2875972 2876505 . - . ID=Thaps261161;Parent=Thaps261161;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2875972 2876134 . - 0 ID=Thaps261161;Parent=Thaps261161;rank=2 chr1 . exon 2875972 2876134 . - . ID=Thaps261161.2;Parent=Thaps261161;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2876159 2876505 . - 0 ID=Thaps261161;Parent=Thaps261161;rank=1 chr1 . exon 2876159 2876505 . - . ID=Thaps261161.1;Parent=Thaps261161;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2877015 2877239 . - . ID=Thaps31166;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSH6];external_name=Thaps31166;logic_name=jgi_thaps3 chr1 ensembl transcript 2877015 2877239 . - . ID=Thaps31166;Parent=Thaps31166;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2877015 2877239 . - 0 ID=Thaps31166;Parent=Thaps31166;rank=1 chr1 . exon 2877015 2877239 . - . ID=Thaps31166.1;Parent=Thaps31166;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2878278 2879300 . - . ID=Thaps31637;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSH7];external_name=Thaps31637;logic_name=jgi_thaps3 chr1 ensembl transcript 2878278 2879300 . - . ID=Thaps31637;Parent=Thaps31637;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2878278 2878951 . - 0 ID=Thaps31637;Parent=Thaps31637;rank=2 chr1 . exon 2878278 2878951 . - . ID=Thaps31637.2;Parent=Thaps31637;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2879069 2879300 . - 0 ID=Thaps31637;Parent=Thaps31637;rank=1 chr1 . exon 2879069 2879300 . - . ID=Thaps31637.1;Parent=Thaps31637;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 2892316 2892347 . ? . description=trf chr1 . repeat_region 2892448 2892478 . ? . description=trf chr1 ensembl protein_coding_gene 2892195 2894379 . - . ID=Thaps1995;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI5];external_name=Thaps1995;logic_name=jgi_thaps3 chr1 ensembl transcript 2892195 2894379 . - . ID=Thaps1995;Parent=Thaps1995;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2892195 2892679 . - 0 ID=Thaps1995;Parent=Thaps1995;rank=3 chr1 . exon 2892195 2892679 . - . ID=Thaps1995.3;Parent=Thaps1995;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2892758 2893348 . - 0 ID=Thaps1995;Parent=Thaps1995;rank=2 chr1 . exon 2892758 2893348 . - . ID=Thaps1995.2;Parent=Thaps1995;constitutive=1;rank=2 chr1 . CDS 2893443 2894379 . - 0 ID=Thaps1995;Parent=Thaps1995;rank=1 chr1 ensembl protein_coding_gene 2886297 2886743 . + . ID=Thaps21076;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI2];external_name=Thaps21076;logic_name=jgi_thaps3 chr1 ensembl transcript 2886297 2886743 . + . ID=Thaps21076;Parent=Thaps21076;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2886297 2886743 . + 0 ID=Thaps21076;Parent=Thaps21076;rank=1 chr1 . exon 2886297 2886743 . + . ID=Thaps21076.1;Parent=Thaps21076;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2889255 2892087 . + . ID=Thaps21078;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI4];external_name=Thaps21078;logic_name=jgi_thaps3 chr1 ensembl transcript 2889255 2892087 . + . ID=Thaps21078;Parent=Thaps21078;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2889255 2890414 . + 0 ID=Thaps21078;Parent=Thaps21078;rank=1 chr1 . exon 2889255 2890414 . + . ID=Thaps21078.1;Parent=Thaps21078;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2890496 2891666 . + 0 ID=Thaps21078;Parent=Thaps21078;rank=2 chr1 . exon 2890496 2891666 . + . ID=Thaps21078.2;Parent=Thaps21078;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2891739 2891813 . + 0 ID=Thaps21078;Parent=Thaps21078;rank=3 chr1 . exon 2891739 2891813 . + . ID=Thaps21078.3;Parent=Thaps21078;constitutive=1;rank=3 chr1 . CDS 2891893 2892087 . + 0 ID=Thaps21078;Parent=Thaps21078;rank=4 chr1 . exon 2891893 2892087 . + . ID=Thaps21078.4;Parent=Thaps21078;constitutive=1;rank=4 chr1 ensembl protein_coding_gene 2886919 2887579 . - . ID=Thaps268143;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI3];external_name=Thaps268143;logic_name=jgi_thaps3 chr1 ensembl transcript 2886919 2887579 . - . ID=Thaps268143;Parent=Thaps268143;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2886919 2887375 . - 0 ID=Thaps268143;Parent=Thaps268143;rank=2 chr1 . exon 2886919 2887375 . - . ID=Thaps268143.2;Parent=Thaps268143;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2887461 2887579 . - 0 ID=Thaps268143;Parent=Thaps268143;rank=1 chr1 . exon 2887461 2887579 . - . ID=Thaps268143.1;Parent=Thaps268143;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2883922 2885653 . - . ID=Thaps39315;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI1];external_name=Thaps39315;logic_name=jgi_thaps3 chr1 ensembl transcript 2883922 2885653 . - . ID=Thaps39315;Parent=Thaps39315;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2883922 2884062 . - 0 ID=Thaps39315;Parent=Thaps39315;rank=3 chr1 . exon 2883922 2884062 . - . ID=Thaps39315.3;Parent=Thaps39315;constitutive=1;rank=3 chr1 . CDS 2884139 2884950 . - 0 ID=Thaps39315;Parent=Thaps39315;rank=2 chr1 . exon 2884139 2884950 . - . ID=Thaps39315.2;Parent=Thaps39315;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2885047 2885653 . - 0 ID=Thaps39315;Parent=Thaps39315;rank=1 chr1 . exon 2885047 2885653 . - . ID=Thaps39315.1;Parent=Thaps39315;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . repeat_region 2897012 2897038 . ? . description=dust chr1 . repeat_region 2897242 2897303 . ? . description=dust chr1 . repeat_region 2897339 2897388 . ? . description=dust chr1 . repeat_region 2898171 2898229 . ? . description=dust chr1 . exon 2893443 2894379 . - . ID=Thaps1995.1;Parent=Thaps1995;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2901094 2902632 . + . ID=Thaps21081;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI9];external_name=Thaps21081;logic_name=jgi_thaps3 chr1 ensembl transcript 2901094 2902632 . + . ID=Thaps21081;Parent=Thaps21081;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2901094 2902632 . + 0 ID=Thaps21081;Parent=Thaps21081;rank=1 chr1 . exon 2901094 2902632 . + . ID=Thaps21081.1;Parent=Thaps21081;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2896613 2897176 . - . ID=Thaps268144;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI7];external_name=Thaps268144;logic_name=jgi_thaps3 chr1 ensembl transcript 2896613 2897176 . - . ID=Thaps268144;Parent=Thaps268144;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2896613 2896971 . - 0 ID=Thaps268144;Parent=Thaps268144;rank=2 chr1 . exon 2896613 2896971 . - . ID=Thaps268144.2;Parent=Thaps268144;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2897050 2897176 . - 0 ID=Thaps268144;Parent=Thaps268144;rank=1 chr1 . exon 2897050 2897176 . - . ID=Thaps268144.1;Parent=Thaps268144;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2899331 2900721 . + . ID=Thaps26874;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI8];external_name=Thaps26874;logic_name=jgi_thaps3 chr1 ensembl transcript 2899331 2900721 . + . ID=Thaps26874;Parent=Thaps26874;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2899331 2899803 . + 0 ID=Thaps26874;Parent=Thaps26874;rank=1 chr1 . exon 2899331 2899803 . + . ID=Thaps26874.1;Parent=Thaps26874;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2899899 2900093 . + 0 ID=Thaps26874;Parent=Thaps26874;rank=2 chr1 . exon 2899899 2900093 . + . ID=Thaps26874.2;Parent=Thaps26874;constitutive=1;rank=2 chr1 . CDS 2900178 2900721 . + 0 ID=Thaps26874;Parent=Thaps26874;rank=3 chr1 . exon 2900178 2900721 . + . ID=Thaps26874.3;Parent=Thaps26874;constitutive=1;ensembl_end_phase=1;rank=3 chr1 ensembl protein_coding_gene 2895968 2896186 . + . ID=Thaps31113;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSI6];external_name=Thaps31113;logic_name=jgi_thaps3 chr1 ensembl transcript 2895968 2896186 . + . ID=Thaps31113;Parent=Thaps31113;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2895968 2896186 . + 0 ID=Thaps31113;Parent=Thaps31113;rank=1 chr1 . exon 2895968 2896186 . + . ID=Thaps31113.1;Parent=Thaps31113;constitutive=1;rank=1 chr1 . repeat_region 2904314 2904340 . ? . description=trf chr1 . repeat_region 2905621 2905656 . ? . description=trf chr1 . repeat_region 2905784 2905837 . ? . description=trf chr1 . repeat_region 2905959 2906130 . - . description=Copia3LTR_TP chr1 . repeat_region 2906863 2906893 . ? . description=trf chr1 . repeat_region 2910560 2910588 . ? . description=trf chr1 ensembl protein_coding_gene 2903094 2904087 . - . ID=Thaps2000;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ0];external_name=Thaps2000;logic_name=jgi_thaps3 chr1 ensembl transcript 2903094 2904087 . - . ID=Thaps2000;Parent=Thaps2000;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2903094 2903152 . - 0 ID=Thaps2000;Parent=Thaps2000;rank=3 chr1 . exon 2903094 2903152 . - . ID=Thaps2000.3;Parent=Thaps2000;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2903366 2903726 . - 0 ID=Thaps2000;Parent=Thaps2000;rank=2 chr1 . exon 2903366 2903726 . - . ID=Thaps2000.2;Parent=Thaps2000;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2903836 2904087 . - 0 ID=Thaps2000;Parent=Thaps2000;rank=1 chr1 . exon 2903836 2904087 . - . ID=Thaps2000.1;Parent=Thaps2000;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2904581 2905574 . - . ID=Thaps2001;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ1];external_name=Thaps2001;logic_name=jgi_thaps3 chr1 ensembl transcript 2904581 2905574 . - . ID=Thaps2001;Parent=Thaps2001;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2904581 2904639 . - 0 ID=Thaps2001;Parent=Thaps2001;rank=3 chr1 . exon 2904581 2904639 . - . ID=Thaps2001.3;Parent=Thaps2001;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2904853 2905213 . - 0 ID=Thaps2001;Parent=Thaps2001;rank=2 chr1 . exon 2904853 2905213 . - . ID=Thaps2001.2;Parent=Thaps2001;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2905323 2905574 . - 0 ID=Thaps2001;Parent=Thaps2001;rank=1 chr1 . exon 2905323 2905574 . - . ID=Thaps2001.1;Parent=Thaps2001;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2910717 2911139 . + . ID=Thaps2003;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ3];external_name=Thaps2003;logic_name=jgi_thaps3 chr1 ensembl transcript 2910717 2911139 . + . ID=Thaps2003;Parent=Thaps2003;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2910717 2911139 . + 0 ID=Thaps2003;Parent=Thaps2003;rank=1 chr1 . exon 2910717 2911139 . + . ID=Thaps2003.1;Parent=Thaps2003;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2911599 2913309 . + . ID=Thaps2004;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ4];external_name=Thaps2004;logic_name=jgi_thaps3 chr1 ensembl transcript 2911599 2913309 . + . ID=Thaps2004;Parent=Thaps2004;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2911599 2911754 . + 0 ID=Thaps2004;Parent=Thaps2004;rank=1 chr1 . exon 2911599 2911754 . + . ID=Thaps2004.1;Parent=Thaps2004;constitutive=1;rank=1 chr1 . CDS 2911990 2913309 . + 0 ID=Thaps2004;Parent=Thaps2004;rank=2 chr1 . exon 2911990 2913309 . + . ID=Thaps2004.2;Parent=Thaps2004;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2907660 2910152 . - . ID=Thaps21082;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ2];external_name=Thaps21082;logic_name=jgi_thaps3 chr1 ensembl transcript 2907660 2910152 . - . ID=Thaps21082;Parent=Thaps21082;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2907660 2910152 . - 0 ID=Thaps21082;Parent=Thaps21082;rank=1 chr1 . exon 2907660 2910152 . - . ID=Thaps21082.1;Parent=Thaps21082;constitutive=1;rank=1 chr1 . repeat_region 2920863 2920919 . ? . description=dust chr1 . repeat_region 2921786 2921794 . ? . description=dust chr1 . repeat_region 2921875 2921896 . ? . description=dust chr1 ensembl tRNA_gene 2919540 2919612 . + . ID=EPrTPOG00000000042;biotype=tRNA;description=tRNA-Thr for anticodon UGU [Source:TRNASCAN_SE%3BAcc:tRNA-Thr];external_name=tRNA-Thr;logic_name=ncrna_eg chr1 ensembl transcript 2919540 2919612 . + . ID=EPrTPOT00000000042;Parent=EPrTPOG00000000042;biotype=tRNA;logic_name=ncrna_eg chr1 . exon 2919540 2919612 . + . ID=EPrTPOE00000000042;Parent=EPrTPOT00000000042;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2915977 2918841 . - . ID=Thaps2006;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ6];external_name=Thaps2006;logic_name=jgi_thaps3 chr1 ensembl transcript 2915977 2918841 . - . ID=Thaps2006;Parent=Thaps2006;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2915977 2918841 . - 0 ID=Thaps2006;Parent=Thaps2006;rank=1 chr1 . exon 2915977 2918841 . - . ID=Thaps2006.1;Parent=Thaps2006;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2922105 2923181 . - . ID=Thaps2008;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ8];external_name=Thaps2008;logic_name=jgi_thaps3 chr1 ensembl transcript 2922105 2923181 . - . ID=Thaps2008;Parent=Thaps2008;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2922105 2923181 . - 0 ID=Thaps2008;Parent=Thaps2008;rank=1 chr1 . exon 2922105 2923181 . - . ID=Thaps2008.1;Parent=Thaps2008;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2914913 2915464 . - . ID=Thaps21083;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ5];external_name=Thaps21083;logic_name=jgi_thaps3 chr1 ensembl transcript 2914913 2915464 . - . ID=Thaps21083;Parent=Thaps21083;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2914913 2915464 . - 0 ID=Thaps21083;Parent=Thaps21083;rank=1 chr1 . exon 2914913 2915464 . - . ID=Thaps21083.1;Parent=Thaps21083;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2920314 2921540 . - . ID=Thaps268145;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ7];external_name=Thaps268145;logic_name=jgi_thaps3 chr1 ensembl transcript 2920314 2921540 . - . ID=Thaps268145;Parent=Thaps268145;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2920314 2920655 . - 0 ID=Thaps268145;Parent=Thaps268145;rank=2 chr1 . exon 2920314 2920655 . - . ID=Thaps268145.2;Parent=Thaps268145;constitutive=1;rank=2 chr1 . CDS 2920806 2921540 . - 0 ID=Thaps268145;Parent=Thaps268145;rank=1 chr1 . exon 2920806 2921540 . - . ID=Thaps268145.1;Parent=Thaps268145;constitutive=1;rank=1 chr1 . repeat_region 2931720 2931743 . ? . description=trf chr1 ensembl protein_coding_gene 2924246 2925061 . - . ID=Thaps2009;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSJ9];external_name=Thaps2009;logic_name=jgi_thaps3 chr1 ensembl transcript 2924246 2925061 . - . ID=Thaps2009;Parent=Thaps2009;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2924246 2924738 . - 0 ID=Thaps2009;Parent=Thaps2009;rank=2 chr1 . exon 2924246 2924738 . - . ID=Thaps2009.2;Parent=Thaps2009;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2924862 2925061 . - 0 ID=Thaps2009;Parent=Thaps2009;rank=1 chr1 . exon 2924862 2925061 . - . ID=Thaps2009.1;Parent=Thaps2009;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 2925721 2928597 . + . ID=Thaps2010;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSK0];external_name=Thaps2010;logic_name=jgi_thaps3 chr1 ensembl transcript 2925721 2928597 . + . ID=Thaps2010;Parent=Thaps2010;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2925721 2926615 . + 0 ID=Thaps2010;Parent=Thaps2010;rank=1 chr1 . exon 2925721 2926615 . + . ID=Thaps2010.1;Parent=Thaps2010;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2926703 2927385 . + 0 ID=Thaps2010;Parent=Thaps2010;rank=2 chr1 . exon 2926703 2927385 . + . ID=Thaps2010.2;Parent=Thaps2010;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2927481 2928004 . + 0 ID=Thaps2010;Parent=Thaps2010;rank=3 chr1 . exon 2927481 2928004 . + . ID=Thaps2010.3;Parent=Thaps2010;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2928093 2928597 . + 0 ID=Thaps2010;Parent=Thaps2010;rank=4 chr1 . exon 2928093 2928597 . + . ID=Thaps2010.4;Parent=Thaps2010;constitutive=1;ensembl_end_phase=1;rank=4 chr1 ensembl protein_coding_gene 2931632 2932723 . + . ID=Thaps2012;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSK2];external_name=Thaps2012;logic_name=jgi_thaps3 chr1 ensembl transcript 2931632 2932723 . + . ID=Thaps2012;Parent=Thaps2012;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2931632 2932723 . + 0 ID=Thaps2012;Parent=Thaps2012;rank=1 chr1 . exon 2931632 2932723 . + . ID=Thaps2012.1;Parent=Thaps2012;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2928944 2929837 . - . ID=Thaps31012;biotype=protein_coding;description=Coproporphyrinogen III oxidase%2C chloroplast targeted [Source:UniProtKB/TrEMBL%3BAcc:B8BSK1];external_name=CPX1;logic_name=jgi_thaps3 chr1 ensembl transcript 2928944 2929837 . - . ID=Thaps31012;Parent=Thaps31012;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2928944 2929837 . - 0 ID=Thaps31012;Parent=Thaps31012;rank=1 chr1 . exon 2928944 2929837 . - . ID=Thaps31012.1;Parent=Thaps31012;constitutive=1;rank=1 chr1 . repeat_region 2941439 2941457 . ? . description=dust chr1 ensembl protein_coding_gene 2936616 2940508 . + . ID=Thaps21085;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSK3];external_name=Thaps21085;logic_name=jgi_thaps3 chr1 ensembl transcript 2936616 2940508 . + . ID=Thaps21085;Parent=Thaps21085;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2936616 2939798 . + 0 ID=Thaps21085;Parent=Thaps21085;rank=1 chr1 . exon 2936616 2939798 . + . ID=Thaps21085.1;Parent=Thaps21085;constitutive=1;rank=1 chr1 . CDS 2939879 2940508 . + 0 ID=Thaps21085;Parent=Thaps21085;rank=2 chr1 . exon 2939879 2940508 . + . ID=Thaps21085.2;Parent=Thaps21085;constitutive=1;rank=2 chr1 . repeat_region 2961624 2961632 . ? . description=dust chr1 ensembl protein_coding_gene 2957943 2959111 . - . ID=Thaps2015;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSK5];external_name=Thaps2015;logic_name=jgi_thaps3 chr1 ensembl transcript 2957943 2959111 . - . ID=Thaps2015;Parent=Thaps2015;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2957943 2958709 . - 0 ID=Thaps2015;Parent=Thaps2015;rank=3 chr1 . exon 2957943 2958709 . - . ID=Thaps2015.3;Parent=Thaps2015;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2958828 2959005 . - 0 ID=Thaps2015;Parent=Thaps2015;rank=2 chr1 . exon 2958828 2959005 . - . ID=Thaps2015.2;Parent=Thaps2015;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2959064 2959111 . - 0 ID=Thaps2015;Parent=Thaps2015;rank=1 chr1 . exon 2959064 2959111 . - . ID=Thaps2015.1;Parent=Thaps2015;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2959417 2959911 . - . ID=Thaps2016;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSK6];external_name=Thaps2016;logic_name=jgi_thaps3 chr1 ensembl transcript 2959417 2959911 . - . ID=Thaps2016;Parent=Thaps2016;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2959417 2959911 . - 0 ID=Thaps2016;Parent=Thaps2016;rank=1 chr1 . exon 2959417 2959911 . - . ID=Thaps2016.1;Parent=Thaps2016;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2960384 2962255 . - . ID=Thaps2017;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSK7];external_name=Thaps2017;logic_name=jgi_thaps3 chr1 ensembl transcript 2960384 2962255 . - . ID=Thaps2017;Parent=Thaps2017;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2960384 2960704 . - 0 ID=Thaps2017;Parent=Thaps2017;rank=2 chr1 . exon 2960384 2960704 . - . ID=Thaps2017.2;Parent=Thaps2017;constitutive=1;rank=2 chr1 . CDS 2960795 2962255 . - 0 ID=Thaps2017;Parent=Thaps2017;rank=1 chr1 . exon 2960795 2962255 . - . ID=Thaps2017.1;Parent=Thaps2017;constitutive=1;rank=1 chr1 ensembl gene 2956777 2957201 . - . ID=Thaps261169;biotype=nontranslating_CDS;external_name=Thaps24712;logic_name=jgi_thaps3 chr1 ensembl transcript 2956777 2957201 . - . ID=Thaps261169;Parent=Thaps261169;biotype=nontranslating_CDS;logic_name=jgi_thaps3 chr1 . exon 2956777 2956936 . - . ID=Thaps261169.2;Parent=Thaps261169;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 2956955 2957201 . - . ID=Thaps261169.1;Parent=Thaps261169;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2955836 2956426 . + . ID=Thaps31658;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSK4];external_name=Thaps31658;logic_name=jgi_thaps3 chr1 ensembl transcript 2955836 2956426 . + . ID=Thaps31658;Parent=Thaps31658;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2955836 2956426 . + 0 ID=Thaps31658;Parent=Thaps31658;rank=1 chr1 . exon 2955836 2956426 . + . ID=Thaps31658.1;Parent=Thaps31658;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2963633 2965280 . + . ID=Thaps2018;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSK8];external_name=Thaps2018;logic_name=jgi_thaps3 chr1 ensembl transcript 2963633 2965280 . + . ID=Thaps2018;Parent=Thaps2018;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2963633 2964805 . + 0 ID=Thaps2018;Parent=Thaps2018;rank=1 chr1 . exon 2963633 2964805 . + . ID=Thaps2018.1;Parent=Thaps2018;constitutive=1;rank=1 chr1 . CDS 2964900 2965280 . + 0 ID=Thaps2018;Parent=Thaps2018;rank=2 chr1 . exon 2964900 2965280 . + . ID=Thaps2018.2;Parent=Thaps2018;constitutive=1;rank=2 chr1 ensembl protein_coding_gene 2965722 2966606 . - . ID=Thaps2019;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSK9];external_name=Thaps2019;logic_name=jgi_thaps3 chr1 ensembl transcript 2965722 2966606 . - . ID=Thaps2019;Parent=Thaps2019;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2965722 2966606 . - 0 ID=Thaps2019;Parent=Thaps2019;rank=1 chr1 . exon 2965722 2966606 . - . ID=Thaps2019.1;Parent=Thaps2019;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2967591 2970665 . - . ID=Thaps2021;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL1];external_name=Thaps2021;logic_name=jgi_thaps3 chr1 ensembl transcript 2967591 2970665 . - . ID=Thaps2021;Parent=Thaps2021;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2967591 2969449 . - 0 ID=Thaps2021;Parent=Thaps2021;rank=2 chr1 . exon 2967591 2969449 . - . ID=Thaps2021.2;Parent=Thaps2021;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2969561 2970665 . - 0 ID=Thaps2021;Parent=Thaps2021;rank=1 chr1 . exon 2969561 2970665 . - . ID=Thaps2021.1;Parent=Thaps2021;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 2972105 2973987 . + . ID=Thaps2022;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL2];external_name=Thaps2022;logic_name=jgi_thaps3 chr1 ensembl transcript 2972105 2973987 . + . ID=Thaps2022;Parent=Thaps2022;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2972105 2973089 . + 0 ID=Thaps2022;Parent=Thaps2022;rank=1 chr1 . exon 2972105 2973089 . + . ID=Thaps2022.1;Parent=Thaps2022;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2973199 2973501 . + 0 ID=Thaps2022;Parent=Thaps2022;rank=2 chr1 . CDS 2973605 2973987 . + 0 ID=Thaps2022;Parent=Thaps2022;rank=3 chr1 ensembl protein_coding_gene 2966913 2967404 . + . ID=Thaps21087;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL0];external_name=Thaps21087;logic_name=jgi_thaps3 chr1 ensembl transcript 2966913 2967404 . + . ID=Thaps21087;Parent=Thaps21087;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2966913 2967105 . + 0 ID=Thaps21087;Parent=Thaps21087;rank=1 chr1 . exon 2966913 2967105 . + . ID=Thaps21087.1;Parent=Thaps21087;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2967226 2967404 . + 0 ID=Thaps21087;Parent=Thaps21087;rank=2 chr1 . exon 2967226 2967404 . + . ID=Thaps21087.2;Parent=Thaps21087;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . repeat_region 2972849 2972867 . ? . description=dust chr1 . repeat_region 2975176 2975196 . ? . description=trf chr1 . repeat_region 2975176 2975196 . ? . description=dust chr1 . repeat_region 2981984 2982016 . ? . description=trf chr1 . repeat_region 2982601 2982631 . ? . description=dust chr1 . repeat_region 2982602 2982631 . ? . description=trf chr1 . exon 2973199 2973501 . + . ID=Thaps2022.2;Parent=Thaps2022;constitutive=1;rank=2 chr1 . exon 2973605 2973987 . + . ID=Thaps2022.3;Parent=Thaps2022;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2974761 2976203 . + . ID=Thaps2023;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL3];external_name=Thaps2023;logic_name=jgi_thaps3 chr1 ensembl transcript 2974761 2976203 . + . ID=Thaps2023;Parent=Thaps2023;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2974761 2976203 . + 0 ID=Thaps2023;Parent=Thaps2023;rank=1 chr1 . exon 2974761 2976203 . + . ID=Thaps2023.1;Parent=Thaps2023;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2976460 2982134 . - . ID=Thaps2024;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL4];external_name=Thaps2024;logic_name=jgi_thaps3 chr1 ensembl transcript 2976460 2982134 . - . ID=Thaps2024;Parent=Thaps2024;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2976460 2976465 . - 0 ID=Thaps2024;Parent=Thaps2024;rank=9 chr1 . exon 2976460 2976465 . - . ID=Thaps2024.9;Parent=Thaps2024;constitutive=1;rank=9 chr1 . CDS 2976675 2977431 . - 0 ID=Thaps2024;Parent=Thaps2024;rank=8 chr1 . exon 2976675 2977431 . - . ID=Thaps2024.8;Parent=Thaps2024;constitutive=1;ensembl_end_phase=1;rank=8 chr1 . CDS 2977506 2978178 . - 0 ID=Thaps2024;Parent=Thaps2024;rank=7 chr1 . exon 2977506 2978178 . - . ID=Thaps2024.7;Parent=Thaps2024;constitutive=1;ensembl_end_phase=1;rank=7 chr1 . CDS 2978271 2978873 . - 0 ID=Thaps2024;Parent=Thaps2024;rank=6 chr1 . exon 2978271 2978873 . - . ID=Thaps2024.6;Parent=Thaps2024;constitutive=1;rank=6 chr1 . CDS 2978950 2979181 . - 0 ID=Thaps2024;Parent=Thaps2024;rank=5 chr1 . exon 2978950 2979181 . - . ID=Thaps2024.5;Parent=Thaps2024;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 2979261 2979589 . - 0 ID=Thaps2024;Parent=Thaps2024;rank=4 chr1 . exon 2979261 2979589 . - . ID=Thaps2024.4;Parent=Thaps2024;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . CDS 2979696 2980100 . - 0 ID=Thaps2024;Parent=Thaps2024;rank=3 chr1 . exon 2979696 2980100 . - . ID=Thaps2024.3;Parent=Thaps2024;constitutive=1;rank=3 chr1 . CDS 2980179 2980239 . - 0 ID=Thaps2024;Parent=Thaps2024;rank=2 chr1 . exon 2980179 2980239 . - . ID=Thaps2024.2;Parent=Thaps2024;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2980446 2982134 . - 0 ID=Thaps2024;Parent=Thaps2024;rank=1 chr1 . exon 2980446 2982134 . - . ID=Thaps2024.1;Parent=Thaps2024;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2982741 2985503 . + . ID=Thaps21088;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL5];external_name=Thaps21088;logic_name=jgi_thaps3 chr1 ensembl transcript 2982741 2985503 . + . ID=Thaps21088;Parent=Thaps21088;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2982741 2984358 . + 0 ID=Thaps21088;Parent=Thaps21088;rank=1 chr1 . exon 2982741 2984358 . + . ID=Thaps21088.1;Parent=Thaps21088;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 2984464 2984622 . + 0 ID=Thaps21088;Parent=Thaps21088;rank=2 chr1 . CDS 2984715 2984764 . + 0 ID=Thaps21088;Parent=Thaps21088;rank=3 chr1 . CDS 2984866 2985311 . + 0 ID=Thaps21088;Parent=Thaps21088;rank=4 chr1 . CDS 2985401 2985503 . + 0 ID=Thaps21088;Parent=Thaps21088;rank=5 chr1 ensembl protein_coding_gene 2988964 2991039 . + . ID=Thaps2027;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL7];external_name=Thaps2027;logic_name=jgi_thaps3 chr1 ensembl transcript 2988964 2991039 . + . ID=Thaps2027;Parent=Thaps2027;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2988964 2989076 . + 0 ID=Thaps2027;Parent=Thaps2027;rank=1 chr1 . exon 2988964 2989076 . + . ID=Thaps2027.1;Parent=Thaps2027;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2989137 2991039 . + 0 ID=Thaps2027;Parent=Thaps2027;rank=2 chr1 . exon 2989137 2991039 . + . ID=Thaps2027.2;Parent=Thaps2027;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . exon 2984464 2984622 . + . ID=Thaps21088.2;Parent=Thaps21088;constitutive=1;rank=2 chr1 . exon 2984715 2984764 . + . ID=Thaps21088.3;Parent=Thaps21088;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . exon 2984866 2985311 . + . ID=Thaps21088.4;Parent=Thaps21088;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . exon 2985401 2985503 . + . ID=Thaps21088.5;Parent=Thaps21088;constitutive=1;ensembl_end_phase=1;rank=5 chr1 ensembl protein_coding_gene 2986163 2988549 . + . ID=Thaps21089;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL6];external_name=Thaps21089;logic_name=jgi_thaps3 chr1 ensembl transcript 2986163 2988549 . + . ID=Thaps21089;Parent=Thaps21089;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2986163 2986321 . + 0 ID=Thaps21089;Parent=Thaps21089;rank=1 chr1 . exon 2986163 2986321 . + . ID=Thaps21089.1;Parent=Thaps21089;constitutive=1;rank=1 chr1 . CDS 2986742 2987365 . + 0 ID=Thaps21089;Parent=Thaps21089;rank=2 chr1 . exon 2986742 2987365 . + . ID=Thaps21089.2;Parent=Thaps21089;constitutive=1;rank=2 chr1 . CDS 2987445 2987838 . + 0 ID=Thaps21089;Parent=Thaps21089;rank=3 chr1 . exon 2987445 2987838 . + . ID=Thaps21089.3;Parent=Thaps21089;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 2987942 2988549 . + 0 ID=Thaps21089;Parent=Thaps21089;rank=4 chr1 . exon 2987942 2988549 . + . ID=Thaps21089.4;Parent=Thaps21089;constitutive=1;ensembl_end_phase=2;rank=4 chr1 . repeat_region 2993232 2993261 . ? . description=trf chr1 . repeat_region 2993232 2993261 . ? . description=dust chr1 ensembl protein_coding_gene 2993567 2995438 . - . ID=Thaps2028;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL8];external_name=Thaps2028;logic_name=jgi_thaps3 chr1 ensembl transcript 2993567 2995438 . - . ID=Thaps2028;Parent=Thaps2028;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2993567 2995438 . - 0 ID=Thaps2028;Parent=Thaps2028;rank=1 chr1 . exon 2993567 2995438 . - . ID=Thaps2028.1;Parent=Thaps2028;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 3000375 3000752 . + . ID=Thaps2031;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSM1];external_name=Thaps2031;logic_name=jgi_thaps3 chr1 ensembl transcript 3000375 3000752 . + . ID=Thaps2031;Parent=Thaps2031;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3000375 3000752 . + 0 ID=Thaps2031;Parent=Thaps2031;rank=1 chr1 . exon 3000375 3000752 . + . ID=Thaps2031.1;Parent=Thaps2031;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 3001403 3002578 . + . ID=Thaps2032;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSM2];external_name=Thaps2032;logic_name=jgi_thaps3 chr1 ensembl transcript 3001403 3002578 . + . ID=Thaps2032;Parent=Thaps2032;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3001403 3001704 . + 0 ID=Thaps2032;Parent=Thaps2032;rank=1 chr1 . exon 3001403 3001704 . + . ID=Thaps2032.1;Parent=Thaps2032;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 3001770 3002484 . + 0 ID=Thaps2032;Parent=Thaps2032;rank=2 chr1 . exon 3001770 3002484 . + . ID=Thaps2032.2;Parent=Thaps2032;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 3002513 3002578 . + 0 ID=Thaps2032;Parent=Thaps2032;rank=3 chr1 . exon 3002513 3002578 . + . ID=Thaps2032.3;Parent=Thaps2032;constitutive=1;rank=3 chr1 ensembl protein_coding_gene 3002700 3003926 . - . ID=Thaps2033;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSM3];external_name=Thaps2033;logic_name=jgi_thaps3 chr1 ensembl transcript 3002700 3003926 . - . ID=Thaps2033;Parent=Thaps2033;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3002700 3003926 . - 0 ID=Thaps2033;Parent=Thaps2033;rank=1 chr1 . exon 3002700 3003926 . - . ID=Thaps2033.1;Parent=Thaps2033;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 2996004 2997753 . + . ID=Thaps21090;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSL9];external_name=Thaps21090;logic_name=jgi_thaps3 chr1 ensembl transcript 2996004 2997753 . + . ID=Thaps21090;Parent=Thaps21090;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2996004 2996140 . + 0 ID=Thaps21090;Parent=Thaps21090;rank=1 chr1 . exon 2996004 2996140 . + . ID=Thaps21090.1;Parent=Thaps21090;constitutive=1;ensembl_end_phase=2;rank=1 chr1 . CDS 2996182 2996267 . + 0 ID=Thaps21090;Parent=Thaps21090;rank=2 chr1 . exon 2996182 2996267 . + . ID=Thaps21090.2;Parent=Thaps21090;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 2996654 2997753 . + 0 ID=Thaps21090;Parent=Thaps21090;rank=3 chr1 . exon 2996654 2997753 . + . ID=Thaps21090.3;Parent=Thaps21090;constitutive=1;ensembl_end_phase=2;rank=3 chr1 ensembl protein_coding_gene 2998298 2999587 . + . ID=Thaps261172;biotype=protein_coding;description=Alcohol dehydrogenase [Source:UniProtKB/TrEMBL%3BAcc:B8BSM0];external_name=ADH2;logic_name=jgi_thaps3 chr1 ensembl transcript 2998298 2999587 . + . ID=Thaps261172;Parent=Thaps261172;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 2998298 2998447 . + 0 ID=Thaps261172;Parent=Thaps261172;rank=1 chr1 . exon 2998298 2998447 . + . ID=Thaps261172.1;Parent=Thaps261172;constitutive=1;rank=1 chr1 . CDS 2998475 2998670 . + 0 ID=Thaps261172;Parent=Thaps261172;rank=2 chr1 . exon 2998475 2998670 . + . ID=Thaps261172.2;Parent=Thaps261172;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 2998823 2998938 . + 0 ID=Thaps261172;Parent=Thaps261172;rank=3 chr1 . exon 2998823 2998938 . + . ID=Thaps261172.3;Parent=Thaps261172;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 2998966 2999062 . + 0 ID=Thaps261172;Parent=Thaps261172;rank=4 chr1 . exon 2998966 2999062 . + . ID=Thaps261172.4;Parent=Thaps261172;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 2999114 2999587 . + 0 ID=Thaps261172;Parent=Thaps261172;rank=5 chr1 . exon 2999114 2999587 . + . ID=Thaps261172.5;Parent=Thaps261172;constitutive=1;rank=5 chr1 . repeat_region 3012179 3012598 . - . description=Copia5ALTR_TP chr1 ensembl protein_coding_gene 3006247 3009025 . - . ID=Thaps2034;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSM4];external_name=Thaps2034;logic_name=jgi_thaps3 chr1 ensembl transcript 3006247 3009025 . - . ID=Thaps2034;Parent=Thaps2034;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3006247 3007902 . - 0 ID=Thaps2034;Parent=Thaps2034;rank=4 chr1 . exon 3006247 3007902 . - . ID=Thaps2034.4;Parent=Thaps2034;constitutive=1;rank=4 chr1 . CDS 3008103 3008442 . - 0 ID=Thaps2034;Parent=Thaps2034;rank=3 chr1 . exon 3008103 3008442 . - . ID=Thaps2034.3;Parent=Thaps2034;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 3008787 3008841 . - 0 ID=Thaps2034;Parent=Thaps2034;rank=2 chr1 . exon 3008787 3008841 . - . ID=Thaps2034.2;Parent=Thaps2034;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 3008938 3009025 . - 0 ID=Thaps2034;Parent=Thaps2034;rank=1 chr1 . exon 3008938 3009025 . - . ID=Thaps2034.1;Parent=Thaps2034;constitutive=1;ensembl_end_phase=1;rank=1 chr1 ensembl protein_coding_gene 3009578 3013403 . + . ID=Thaps2035;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSM5];external_name=Thaps2035;logic_name=jgi_thaps3 chr1 ensembl transcript 3009578 3013403 . + . ID=Thaps2035;Parent=Thaps2035;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3009578 3010178 . + 0 ID=Thaps2035;Parent=Thaps2035;rank=1 chr1 . exon 3009578 3010178 . + . ID=Thaps2035.1;Parent=Thaps2035;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 3010288 3010561 . + 0 ID=Thaps2035;Parent=Thaps2035;rank=2 chr1 . exon 3010288 3010561 . + . ID=Thaps2035.2;Parent=Thaps2035;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 3011000 3011102 . + 0 ID=Thaps2035;Parent=Thaps2035;rank=3 chr1 . exon 3011000 3011102 . + . ID=Thaps2035.3;Parent=Thaps2035;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 3011213 3011345 . + 0 ID=Thaps2035;Parent=Thaps2035;rank=4 chr1 . exon 3011213 3011345 . + . ID=Thaps2035.4;Parent=Thaps2035;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 3011433 3011456 . + 0 ID=Thaps2035;Parent=Thaps2035;rank=5 chr1 . exon 3011433 3011456 . + . ID=Thaps2035.5;Parent=Thaps2035;constitutive=1;rank=5 chr1 . CDS 3011573 3012174 . + 0 ID=Thaps2035;Parent=Thaps2035;rank=6 chr1 . exon 3011573 3012174 . + . ID=Thaps2035.6;Parent=Thaps2035;constitutive=1;ensembl_end_phase=2;rank=6 chr1 . CDS 3012648 3012749 . + 0 ID=Thaps2035;Parent=Thaps2035;rank=7 chr1 . exon 3012648 3012749 . + . ID=Thaps2035.7;Parent=Thaps2035;constitutive=1;rank=7 chr1 . CDS 3012834 3013403 . + 0 ID=Thaps2035;Parent=Thaps2035;rank=8 chr1 . repeat_region 3015314 3015322 . ? . description=dust chr1 . repeat_region 3020328 3020335 . ? . description=dust chr1 . repeat_region 3021513 3022156 . + . description=Gypsy3LTR_TP chr1 . repeat_region 3022012 3022066 . ? . description=trf chr1 . repeat_region 3022048 3022083 . ? . description=trf chr1 . exon 3012834 3013403 . + . ID=Thaps2035.8;Parent=Thaps2035;constitutive=1;rank=8 chr1 ensembl protein_coding_gene 3014123 3015896 . - . ID=Thaps2036;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSM6];external_name=Thaps2036;logic_name=jgi_thaps3 chr1 ensembl transcript 3014123 3015896 . - . ID=Thaps2036;Parent=Thaps2036;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3014123 3014731 . - 0 ID=Thaps2036;Parent=Thaps2036;rank=3 chr1 . exon 3014123 3014731 . - . ID=Thaps2036.3;Parent=Thaps2036;constitutive=1;rank=3 chr1 . CDS 3015277 3015364 . - 0 ID=Thaps2036;Parent=Thaps2036;rank=2 chr1 . exon 3015277 3015364 . - . ID=Thaps2036.2;Parent=Thaps2036;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 3015574 3015896 . - 0 ID=Thaps2036;Parent=Thaps2036;rank=1 chr1 . exon 3015574 3015896 . - . ID=Thaps2036.1;Parent=Thaps2036;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 3016497 3017519 . + . ID=Thaps2037;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSM7];external_name=Thaps2037;logic_name=jgi_thaps3 chr1 ensembl transcript 3016497 3017519 . + . ID=Thaps2037;Parent=Thaps2037;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3016497 3017519 . + 0 ID=Thaps2037;Parent=Thaps2037;rank=1 chr1 . exon 3016497 3017519 . + . ID=Thaps2037.1;Parent=Thaps2037;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 3017796 3019652 . - . ID=Thaps2038;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSM8];external_name=Thaps2038;logic_name=jgi_thaps3 chr1 ensembl transcript 3017796 3019652 . - . ID=Thaps2038;Parent=Thaps2038;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3017796 3019652 . - 0 ID=Thaps2038;Parent=Thaps2038;rank=1 chr1 . exon 3017796 3019652 . - . ID=Thaps2038.1;Parent=Thaps2038;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 3023097 3024905 . - . ID=Thaps2039;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSM9];external_name=Thaps2039;logic_name=jgi_thaps3 chr1 ensembl transcript 3023097 3024905 . - . ID=Thaps2039;Parent=Thaps2039;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3023097 3023101 . - 0 ID=Thaps2039;Parent=Thaps2039;rank=5 chr1 . exon 3023097 3023101 . - . ID=Thaps2039.5;Parent=Thaps2039;constitutive=1;ensembl_end_phase=2;rank=5 chr1 . CDS 3023286 3023336 . - 0 ID=Thaps2039;Parent=Thaps2039;rank=4 chr1 . exon 3023286 3023336 . - . ID=Thaps2039.4;Parent=Thaps2039;constitutive=1;rank=4 chr1 . CDS 3023465 3023574 . - 0 ID=Thaps2039;Parent=Thaps2039;rank=3 chr1 . exon 3023465 3023574 . - . ID=Thaps2039.3;Parent=Thaps2039;constitutive=1;ensembl_end_phase=2;rank=3 chr1 . CDS 3023608 3024174 . - 0 ID=Thaps2039;Parent=Thaps2039;rank=2 chr1 . exon 3023608 3024174 . - . ID=Thaps2039.2;Parent=Thaps2039;constitutive=1;rank=2 chr1 . CDS 3024334 3024905 . - 0 ID=Thaps2039;Parent=Thaps2039;rank=1 chr1 . exon 3024334 3024905 . - . ID=Thaps2039.1;Parent=Thaps2039;constitutive=1;ensembl_end_phase=2;rank=1 chr1 ensembl protein_coding_gene 3032099 3032366 . + . ID=Thaps261174;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSN2];external_name=Thaps261174;logic_name=jgi_thaps3 chr1 ensembl transcript 3032099 3032366 . + . ID=Thaps261174;Parent=Thaps261174;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3032099 3032192 . + 0 ID=Thaps261174;Parent=Thaps261174;rank=1 chr1 . exon 3032099 3032192 . + . ID=Thaps261174.1;Parent=Thaps261174;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 3032264 3032366 . + 0 ID=Thaps261174;Parent=Thaps261174;rank=2 chr1 . exon 3032264 3032366 . + . ID=Thaps261174.2;Parent=Thaps261174;constitutive=1;ensembl_end_phase=1;rank=2 chr1 ensembl protein_coding_gene 3030705 3031837 . + . ID=Thaps268146;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSN1];external_name=Thaps268146;logic_name=jgi_thaps3 chr1 ensembl transcript 3030705 3031837 . + . ID=Thaps268146;Parent=Thaps268146;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3030705 3030734 . + 0 ID=Thaps268146;Parent=Thaps268146;rank=1 chr1 . exon 3030705 3030734 . + . ID=Thaps268146.1;Parent=Thaps268146;constitutive=1;rank=1 chr1 . CDS 3030829 3030916 . + 0 ID=Thaps268146;Parent=Thaps268146;rank=2 chr1 . exon 3030829 3030916 . + . ID=Thaps268146.2;Parent=Thaps268146;constitutive=1;ensembl_end_phase=1;rank=2 chr1 . CDS 3030994 3031531 . + 0 ID=Thaps268146;Parent=Thaps268146;rank=3 chr1 . exon 3030994 3031531 . + . ID=Thaps268146.3;Parent=Thaps268146;constitutive=1;ensembl_end_phase=1;rank=3 chr1 . CDS 3031612 3031837 . + 0 ID=Thaps268146;Parent=Thaps268146;rank=4 chr1 . exon 3031612 3031837 . + . ID=Thaps268146.4;Parent=Thaps268146;constitutive=1;ensembl_end_phase=1;rank=4 chr1 ensembl protein_coding_gene 3027344 3027679 . + . ID=Thaps31287;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSN0];external_name=Thaps31287;logic_name=jgi_thaps3 chr1 ensembl transcript 3027344 3027679 . + . ID=Thaps31287;Parent=Thaps31287;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3027344 3027679 . + 0 ID=Thaps31287;Parent=Thaps31287;rank=1 chr1 . exon 3027344 3027679 . + . ID=Thaps31287.1;Parent=Thaps31287;constitutive=1;rank=1 chr1 . repeat_region 3034679 3034722 . ? . description=trf chr1 . repeat_region 3035605 3035624 . ? . description=trf chr1 . repeat_region 3042073 3042584 . ? . description=dust chr1 . repeat_region 3042073 3042585 . ? . description=trf chr1 ensembl protein_coding_gene 3033078 3033609 . + . ID=Thaps2042;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSN3];external_name=Thaps2042;logic_name=jgi_thaps3 chr1 ensembl transcript 3033078 3033609 . + . ID=Thaps2042;Parent=Thaps2042;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3033078 3033231 . + 0 ID=Thaps2042;Parent=Thaps2042;rank=1 chr1 . exon 3033078 3033231 . + . ID=Thaps2042.1;Parent=Thaps2042;constitutive=1;ensembl_end_phase=1;rank=1 chr1 . CDS 3033308 3033609 . + 0 ID=Thaps2042;Parent=Thaps2042;rank=2 chr1 . exon 3033308 3033609 . + . ID=Thaps2042.2;Parent=Thaps2042;constitutive=1;ensembl_end_phase=2;rank=2 chr1 ensembl protein_coding_gene 3039075 3042042 . - . ID=Thaps2045;biotype=protein_coding;description=Predicted protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSN6];external_name=Thaps2045;logic_name=jgi_thaps3 chr1 ensembl transcript 3039075 3042042 . - . ID=Thaps2045;Parent=Thaps2045;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3039075 3040904 . - 0 ID=Thaps2045;Parent=Thaps2045;rank=3 chr1 . exon 3039075 3040904 . - . ID=Thaps2045.3;Parent=Thaps2045;constitutive=1;rank=3 chr1 . CDS 3041007 3041288 . - 0 ID=Thaps2045;Parent=Thaps2045;rank=2 chr1 . exon 3041007 3041288 . - . ID=Thaps2045.2;Parent=Thaps2045;constitutive=1;rank=2 chr1 . CDS 3041422 3042042 . - 0 ID=Thaps2045;Parent=Thaps2045;rank=1 chr1 . exon 3041422 3042042 . - . ID=Thaps2045.1;Parent=Thaps2045;constitutive=1;rank=1 chr1 ensembl protein_coding_gene 3035774 3037298 . + . ID=Thaps261176;biotype=protein_coding;description=Putative uncharacterized protein [Source:UniProtKB/TrEMBL%3BAcc:B8BSN5];external_name=Thaps261176;logic_name=jgi_thaps3 chr1 ensembl transcript 3035774 3037298 . + . ID=Thaps261176;Parent=Thaps261176;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3035774 3035989 . + 0 ID=Thaps261176;Parent=Thaps261176;rank=1 chr1 . exon 3035774 3035989 . + . ID=Thaps261176.1;Parent=Thaps261176;constitutive=1;rank=1 chr1 . CDS 3036029 3036207 . + 0 ID=Thaps261176;Parent=Thaps261176;rank=2 chr1 . exon 3036029 3036207 . + . ID=Thaps261176.2;Parent=Thaps261176;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 3036264 3036302 . + 0 ID=Thaps261176;Parent=Thaps261176;rank=3 chr1 . exon 3036264 3036302 . + . ID=Thaps261176.3;Parent=Thaps261176;constitutive=1;rank=3 chr1 . CDS 3036427 3036580 . + 0 ID=Thaps261176;Parent=Thaps261176;rank=4 chr1 . exon 3036427 3036580 . + . ID=Thaps261176.4;Parent=Thaps261176;constitutive=1;ensembl_end_phase=1;rank=4 chr1 . CDS 3036736 3036766 . + 0 ID=Thaps261176;Parent=Thaps261176;rank=5 chr1 . exon 3036736 3036766 . + . ID=Thaps261176.5;Parent=Thaps261176;constitutive=1;ensembl_end_phase=1;rank=5 chr1 . CDS 3037071 3037298 . + 0 ID=Thaps261176;Parent=Thaps261176;rank=6 chr1 . exon 3037071 3037298 . + . ID=Thaps261176.6;Parent=Thaps261176;constitutive=1;rank=6 chr1 ensembl protein_coding_gene 3034000 3034968 . - . ID=Thaps31265;biotype=protein_coding;description=Carnitine/acylcarnitine translocase [Source:UniProtKB/TrEMBL%3BAcc:B8BSN4];external_name=CAT1_1;logic_name=jgi_thaps3 chr1 ensembl transcript 3034000 3034968 . - . ID=Thaps31265;Parent=Thaps31265;biotype=protein_coding;logic_name=jgi_thaps3 chr1 . CDS 3034000 3034763 . - 0 ID=Thaps31265;Parent=Thaps31265;rank=2 chr1 . exon 3034000 3034763 . - . ID=Thaps31265.2;Parent=Thaps31265;constitutive=1;ensembl_end_phase=2;rank=2 chr1 . CDS 3034860 3034968 . - 0 ID=Thaps31265;Parent=Thaps31265;rank=1 chr1 . exon 3034860 3034968 . - . ID=Thaps31265.1;Parent=Thaps31265;constitutive=1;ensembl_end_phase=1;rank=1